RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRAMD1B (Homo sapiens)

Ensembl gene IDs: ENSG00000023171

Ensembl transcript IDs: ENST00000322282.11, ENST00000450171.2, ENST00000456860.6, ENST00000525757.1, ENST00000525945.1, ENST00000529432.5, ENST00000529750.5, ENST00000532581.5, ENST00000533341.3, ENST00000534764.1, ENST00000632815.1, ENST00000633087.1, ENST00000633646.1, ENST00000635736.2, ENST00000638086.1, ENST00000638157.1, ENST00000640939.1, ENST00000646146.1

Found 1691 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTaGCCTCCTCAGCTGCTCCACCATAAGAAAACGCTGCTCCGGCCA +
Preference number: 1 (lower is better)
Translates to: WEEGDQGRSVLRGGS*PPQLLHHKKTLLRP
Trigger: TGGCCGGAGCAGCGTTTTCTTATGGTGGAGCAGCTGAGGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR GCA 90 bp GTTGGGGAGATCGTCAGCATCAGCTCCTCCTGGCCGGCAAGGTGCTaGTCATCAGCTGCCAAGACTCCAGTCCTGGCTCCAGGGCCTGTT +
Preference number: 1 (lower is better)
Translates to: VGEIVSISSSWPARC*SSAAKTPVLAPGPV
Trigger: AACAGGCCCTGGAGCCAGGACTGGAGTCTTGGCAGCTGATGAGCAGCACCTTGCCGGCCAGGAGGAGCTGATGCTGACGATCTCCCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
3UTR GCA 90 bp GATGTTGGGGAGATCGTCAGCATCAGCTCCTCCTGGCCGGCAAGGTaGTGCTCATCAGCTGCCAAGACTCCAGTCCTGGCTCCAGGGCCT +
Preference number: 1 (lower is better)
Translates to: DVGEIVSISSSWPAR*CSSAAKTPVLAPGP
Trigger: AGGCCCTGGAGCCAGGACTGGAGTCTTGGCAGCTGATGAGCAGCACCTTGCCGGCCAGGAGGAGCTGATGCTGACGATCTCCCCAACATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
3UTR CCA 90 bp TGCACCCCGGACGTGGCAAGGGCCTTCTCTCCCTCTCTCAAATCCTaGAGGGCCCAGCACACCCTGACTCATCCTGGAAATCACACTGAC +
Preference number: 1 (lower is better)
Translates to: CTPDVARAFSPSLKS*RAQHTLTHPGNHTD
Trigger: GTCAGTGTGATTTCCAGGATGAGTCAGGGTGTGCTGGGCCCTCCAGGATTTGAGAGAGGGAGAGAAGGCCCTTGCCACGTCCGGGGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR GCA 90 bp TCCCAGCCCTTACTGGGTCCACACCCTACACAGGTCGGAGGAAGGTaGAGGGGTGATGGAGGAGAGTATCCTTCAGAACACGAGTCTCGG +
Preference number: 1 (lower is better)
Translates to: SQPLLGPHPTQVGGR*RGDGGEYPSEHESR
Trigger: CCGAGACTCGTGTTCTGAAGGATACTCTCCTCCATCACCCCTGCACCTTCCTCCGACCTGTGTAGGGTGTGGACCCAGTAAGGGCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR GCA 90 bp ACCCATCTTGGTGCTCACCACTCACAGTGTTCTGTGGGTAGACCCTaGACCCCGGACGTGGCAAGGGCCTTCTCTCCCTCTCTCAAATCC +
Preference number: 1 (lower is better)
Translates to: THLGAHHSQCSVGRP*TPDVARAFSPSLKS
Trigger: GGATTTGAGAGAGGGAGAGAAGGCCCTTGCCACGTCCGGGGTGCAGGGTCTACCCACAGAACACTGTGAGTGGTGAGCACCAAGATGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR TCA 90 bp CTGCTCATCAGCTGCCAAGACTCCAGTCCTGGCTCCAGGGCCTGTTaGGGATCTCCAGTCACAAGACCCCGGAGCTGTTGCACAGAACAT +
Preference number: 1 (lower is better)
Translates to: LLISCQDSSPGSRAC*GSPVTRPRSCCTEH
Trigger: ATGTTCTGTGCAACAGCTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAGCCAGGACTGGAGTCTTGGCAGCTGATGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
3UTR TCA 90 bp CAGTCTGCACCATGCCTCCTTCTTTGGCTCAGAGCCCATGAGCCTTaGTCCCTACCAGTGTCCCTCACCCAAAGGCCTGGACAAGAACTG +
Preference number: 1 (lower is better)
Translates to: QSAPCLLLWLRAHEP*SLPVSLTQRPGQEL
Trigger: CAGTTCTTGTCCAGGCCTTTGGGTGAGGGACACTGGTAGGGATCAAGGCTCATGGGCTCTGAGCCAAAGAAGGAGGCATGGTGCAGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR TCA 90 bp TTTCCAGCAGTCTGCACCATGCCTCCTTCTTTGGCTCAGAGCCCATaGGCCTTGATCCCTACCAGTGTCCCTCACCCAAAGGCCTGGACA +
Preference number: 1 (lower is better)
Translates to: FPAVCTMPPSLAQSP*ALIPTSVPHPKAWT
Trigger: TGTCCAGGCCTTTGGGTGAGGGACACTGGTAGGGATCAAGGCTCATGGGCTCTGAGCCAAAGAAGGAGGCATGGTGCAGACTGCTGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR TCA 90 bp CTCAGTACTGCCCTCTCTGCCACCTTTTCCTCCTGGGAATGGTCCTaGGAGGTAAAGCAGAAGCAGAACAACTCCCTGCGGCCAGGTCTG +
Preference number: 1 (lower is better)
Translates to: LSTALSATFSSWEWS*EVKQKQNNSLRPGL
Trigger: CAGACCTGGCCGCAGGGAGTTGTTCTGCTTCTGCTTTACCTCTCAGGACCATTCCCAGGAGGAAAAGGTGGCAGAGAGGGCAGTACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR CCA 90 bp AAGACCCCGGAGCTGTTGCACAGAACATCAAAACAGGGAGCTGGCTaGGCCCTTCACAGCCATGGCCAGAGCAGAAGTGAGGTAACAAGG +
Preference number: 1 (lower is better)
Translates to: KTPELLHRTSKQGAG*ALHSHGQSRSEVTR
Trigger: CCTTGTTACCTCACTTCTGCTCTGGCCATGGCTGTGAAGGGCCCAGCCAGCTCCCTGTTTTGATGTTCTGTGCAACAGCTCCGGGGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
3UTR CCA 90 bp TTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCCTCCTaGCCGGCAAGGTGCTGCTCATCAGCTGCCAAGACTCCAGTCCTG +
Preference number: 1 (lower is better)
Translates to: FKPSDVGEIVSISSS*PARCCSSAAKTPVL
Trigger: CAGGACTGGAGTCTTGGCAGCTGATGAGCAGCACCTTGCCGGCCAGGAGGAGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
3UTR CCA 90 bp AGTACGGTCTGGATCAAGTGGGCGGCCAACCCTAGGAGTTTAGACTaGGCTCCCTTGATGCTTCTGTGTTCCCAAGAGAATGCCTGGGGA +
Preference number: 1 (lower is better)
Translates to: STVWIKWAANPRSLD*APLMLLCSQENAWG
Trigger: TCCCCAGGCATTCTCTTGGGAACACAGAAGCATCAAGGGAGCCCAGTCTAAACTCCTAGGGTTGGCCGCCCACTTGATCCAGACCGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR CCA 90 bp ACTTCGCCCAGATCCAGCCTGGGAGAAGACCAGAGAGAAAGCGGGTaGGAAAGTAAGAAATTCCCAGCCCTTACTGGGTCCACACCCTAC +
Preference number: 1 (lower is better)
Translates to: TSPRSSLGEDQRESG*ESKKFPALTGSTPY
Trigger: GTAGGGTGTGGACCCAGTAAGGGCTGGGAATTTCTTACTTTCCCACCCGCTTTCTCTCTGGTCTTCTCCCAGGCTGGATCTGGGCGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR TCA 90 bp ACCACACAATGCAGCCTTCCTAGCTTTCCAAGCATCCTCTCCATCTaGCACTCAGTACGGTCTGGATCAAGTGGGCGGCCAACCCTAGGA +
Preference number: 1 (lower is better)
Translates to: TTQCSLPSFPSILSI*HSVRSGSSGRPTLG
Trigger: TCCTAGGGTTGGCCGCCCACTTGATCCAGACCGTACTGAGTGTCAGATGGAGAGGATGCTTGGAAAGCTAGGAAGGCTGCATTGTGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR TCA 90 bp GGTTTGGGAAGATGGTCTGGTCCATGCAGAGAGTGGTCTGGCCCTTaGGTGCAGGGTAGGAAAATGTGGGGAGCCACAAGCTATTGTTGG +
Preference number: 1 (lower is better)
Translates to: GLGRWSGPCREWSGP*VQGRKMWGATSYCW
Trigger: CCAACAATAGCTTGTGGCTCCCCACATTTTCCTACCCTGCACTCAAGGGCCAGACCACTCTCTGCATGGACCAGACCATCTTCCCAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
3UTR GCA 90 bp GGAAAAGTCAGGACCCAGGCTCAGGTCTCCAAACCGTCAGTGCAGTaGTCTTACACAGAGCTTCAAGCAGCTGATCTTGCTGGCCTGAGA +
Preference number: 1 (lower is better)
Translates to: GKVRTQAQVSKPSVQ*SYTELQAADLAGLR
Trigger: TCTCAGGCCAGCAAGATCAGCTGCTTGAAGCTCTGTGTAAGAGCACTGCACTGACGGTTTGGAGACCTGAGCCTGGGTCCTGACTTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR CCA 90 bp TCCAAGCATCCTCTCCATCTGACACTCAGTACGGTCTGGATCAAGTaGGCGGCCAACCCTAGGAGTTTAGACTGGGCTCCCTTGATGCTT +
Preference number: 1 (lower is better)
Translates to: SKHPLHLTLSTVWIK*AANPRSLDWAPLML
Trigger: AAGCATCAAGGGAGCCCAGTCTAAACTCCTAGGGTTGGCCGCCCACTTGATCCAGACCGTACTGAGTGTCAGATGGAGAGGATGCTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR GCA 90 bp TGGGAAGATGGTCTGGTCCATGCAGAGAGTGGTCTGGCCCTTGAGTaGAGGGTAGGAAAATGTGGGGAGCCACAAGCTATTGTTGGCAAA +
Preference number: 1 (lower is better)
Translates to: WEDGLVHAESGLALE*RVGKCGEPQAIVGK
Trigger: TTTGCCAACAATAGCTTGTGGCTCCCCACATTTTCCTACCCTGCACTCAAGGGCCAGACCACTCTCTGCATGGACCAGACCATCTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
3UTR TCA 90 bp GACAGTCGTCTCCACTGGCTAATGTTGGTTCGTTCAAAGAGCAAATaGGGCTGGCAACCCATCTTGGTGCTCACCACTCACAGTGTTCTG +
Preference number: 1 (lower is better)
Translates to: DSRLHWLMLVRSKSK*GWQPILVLTTHSVL
Trigger: CAGAACACTGTGAGTGGTGAGCACCAAGATGGGTTGCCAGCCTCATTTGCTCTTTGAACGAACCAACATTAGCCAGTGGAGACGACTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR TCA 90 bp TGCAGTGCTCTTACACAGAGCTTCAAGCAGCTGATCTTGCTGGCCTaGGATGTAATCCTCTTGTCCCCAAAGAGGTGGATGAGGAAGGGA +
Preference number: 1 (lower is better)
Translates to: CSALTQSFKQLILLA*DVILLSPKRWMRKG
Trigger: TCCCTTCCTCATCCACCTCTTTGGGGACAAGAGGATTACATCTCAGGCCAGCAAGATCAGCTGCTTGAAGCTCTGTGTAAGAGCACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR TCA 90 bp GGGCAGGGACACGGAGAGAATCCACTTCTCACAAAGCATTCCTCTTaGGCTCTCTTTGTCCTCCCCATGTCATTCCAGGTTCTTAGTGTC +
Preference number: 1 (lower is better)
Translates to: GQGHGENPLLTKHSS*ALFVLPMSFQVLSV
Trigger: GACACTAAGAACCTGGAATGACATGGGGAGGACAAAGAGAGCTCAAGAGGAATGCTTTGTGAGAAGTGGATTCTCTCCGTGTCCCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR GCA 90 bp CCCGTAGGGCATAGATTTCACTTGGCCTTTTCCTGCCCAAACACATaGACCTTTGCCAAATCCTTCCCTCCAGTGGCTCAGATGCTTTTT +
Preference number: 1 (lower is better)
Translates to: PVGHRFHLAFSCPNT*TFAKSFPPVAQMLF
Trigger: AAAAAGCATCTGAGCCACTGGAGGGAAGGATTTGGCAAAGGTGCATGTGTTTGGGCAGGAAAAGGCCAAGTGAAATCTATGCCCTACGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR CCA 90 bp AAAAGGGCTGGCTTTGGCTGCCCTGAAGAGCTTAAAGAAGTGGCATaGTATGACACAGAAAGTACCCTTCTGGGACCACAAGCATCCAGA +
Preference number: 1 (lower is better)
Translates to: KRAGFGCPEELKEVA*YDTESTLLGPQASR
Trigger: TCTGGATGCTTGTGGTCCCAGAAGGGTACTTTCTGTGTCATACCATGCCACTTCTTTAAGCTCTTCAGGGCAGCCAAAGCCAGCCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR CCA 90 bp AGGAGAAAAGGGCTGGCTTTGGCTGCCCTGAAGAGCTTAAAGAAGTaGCATGGTATGACACAGAAAGTACCCTTCTGGGACCACAAGCAT +
Preference number: 1 (lower is better)
Translates to: RRKGLALAALKSLKK*HGMTQKVPFWDHKH
Trigger: ATGCTTGTGGTCCCAGAAGGGTACTTTCTGTGTCATACCATGCCACTTCTTTAAGCTCTTCAGGGCAGCCAAAGCCAGCCCTTTTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR TCA 90 bp AGAAGAATAAGCAAGACTGAAGACCTCTGCATGCCAAACTGGCTATaGCTCTTTCATGAATCTCCACAAGCTCTGCCTGGAGCTGGTGGG +
Preference number: 1 (lower is better)
Translates to: RRISKTEDLCMPNWL*LFHESPQALPGAGG
Trigger: CCCACCAGCTCCAGGCAGAGCTTGTGGAGATTCATGAAAGAGTCATAGCCAGTTTGGCATGCAGAGGTCTTCAGTCTTGCTTATTCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR GCA 90 bp CAAACACATGCACCTTTGCCAAATCCTTCCCTCCAGTGGCTCAGATaGTTTTTCTATGTGCAAACTGTCTCAGACAGTCGTCTCCACTGG +
Preference number: 1 (lower is better)
Translates to: QTHAPLPNPSLQWLR*FFYVQTVSDSRLHW
Trigger: CCAGTGGAGACGACTGTCTGAGACAGTTTGCACATAGAAAAAGCATCTGAGCCACTGGAGGGAAGGATTTGGCAAAGGTGCATGTGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR CCA 90 bp TTTCCTGCCCAAACACATGCACCTTTGCCAAATCCTTCCCTCCAGTaGCTCAGATGCTTTTTCTATGTGCAAACTGTCTCAGACAGTCGT +
Preference number: 1 (lower is better)
Translates to: FPAQTHAPLPNPSLQ*LRCFFYVQTVSDSR
Trigger: ACGACTGTCTGAGACAGTTTGCACATAGAAAAAGCATCTGAGCCACTGGAGGGAAGGATTTGGCAAAGGTGCATGTGTTTGGGCAGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR TCA 90 bp TTTGCTTCTGCAATGTCTTATTGTATTGAGAGAAGCAAGGAGGGCTaGAGAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATC +
Preference number: 1 (lower is better)
Translates to: FASAMSYCIERSKEG*RTTMFFKPSDVGEI
Trigger: GATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTCTTCAGCCCTCCTTGCTTCTCTCAATACAATAAGACATTGCAGAAGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
3UTR TCA 90 bp ATCTATAGATCTATAGATCACTGTAAGAGGTCAGGTACAGTGCTGTaGCGATACAAAGATGAACATGATTGGTCTTGGAGTATTCCAGTG +
Preference number: 1 (lower is better)
Translates to: IYRSIDHCKRSGTVL*RYKDEHDWSWSIPV
Trigger: CACTGGAATACTCCAAGACCAATCATGTTCATCTTTGTATCGTCACAGCACTGTACCTGACCTCTTACAGTGATCTATAGATCTATAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
3UTR-3UTR TCA 90 bp TCTGTGGGTAGACCCTGCACCCCGGACGTGGCAAGGGCCTTCTCTCCCTCTCTCAGGGGAGGTCGGTGCTaGGAGGCGGTTCCTGCCCTC +
Preference number: 2 (lower is better)
Translates to: SVGRPCTPDVARAFSPSLRGGRC*EAVPAL
Trigger: GAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCT...GAGAGAGGGAGAGAAGGCCCTTGCCACGTCCGGGGTGCAGGGTCTACCCACAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR TCA 90 bp TTGACTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACAGGGGAGGTCGGTGCTaGGAGGCGGTTCCTGCCCTC +
Preference number: 2 (lower is better)
Translates to: LTMQSQHVAPKPQADAPDRGGRC*EAVPAL
Trigger: GAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCT...GTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAGTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR GCA 90 bp GTGGGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCACCATAAGAAAACGCTaGTCCGGCCAGCACAGGGCG +
Preference number: 2 (lower is better)
Translates to: VGGGRSGEVGAERRFLPSTIRKR*SGQHRA
Trigger: CGCCCTGTGCTGGCCGGAGCAGCGTTTTCTTATGGT...GGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR GCA 90 bp TCTGTGGGTAGACCCTGCACCCCGGACGTGGCAAGGGCCTTCTCTCCCTCTCTCCGAGTCTCGGGAGCCTaGCACCACACAATGCAGCCT +
Preference number: 2 (lower is better)
Translates to: SVGRPCTPDVARAFSPSLRVSGA*HHTMQP
Trigger: AGGCTGCATTGTGTGGTGGCAGGCTCCCGAGACTCG...GAGAGAGGGAGAGAAGGCCCTTGCCACGTCCGGGGTGCAGGGTCTACCCACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR GCA 90 bp CTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGCTGTTGCACAGACTGAGAGGCGGTTCCTaGCCTCCTCAGCTGCTCCAC +
Preference number: 2 (lower is better)
Translates to: LQGLLRISSHKTPELLHRLRGGS*PPQLLH
Trigger: GTGGAGCAGCTGAGGAGGGCAGGAACCGCCTCTCAG...TCTGTGCAACAGCTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CCA 90 bp GTGGGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCCCCGCTCCTTCTCCCTaGTACATAGGCATTATCTCT +
Preference number: 2 (lower is better)
Translates to: VGGGRSGEVGAERRFLPSPAPSP*YIGIIS
Trigger: AGAGATAATGCCTATGTACCAGGGAGAAGGAGCGGG...GGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR TCA 90 bp CTCCAGTCCTGGCTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGGTGACAGGAGGATACTaGAGCTCAGAGAGGGGGAGT +
Preference number: 2 (lower is better)
Translates to: LQSWLQGLLRISSHKTPEVTGGY*SSERGS
Trigger: ACTCCCCCTCTCTGAGCTTCAGTATCCTCCTGTCAC...CTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAGCCAGGACTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR CAA 90 bp GCTGCTCATCAGCTGCCAAGACTCCAGTCCTGGCTCCAGGGCCTGTaGAGGATCTCCAGTCACAAGACCCCGGAGCTGTTGCACAGAACA +
Preference number: 2 (lower is better)
Translates to: AAHQLPRLQSWLQGL*RISSHKTPELLHRT
Trigger: TGTTCTGTGCAACAGCTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAGCCAGGACTGGAGTCTTGGCAGCTGATGAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
3UTR-3UTR GCA 90 bp GAACCCCCATTGCCAAGTCTGAGAAACTCAGGATTGGGAATGGCTCCCGTAGGGCTGAGAGGCGGTTCCTaGCCTCCTCAGCTGCTCCAC +
Preference number: 2 (lower is better)
Translates to: EPPLPSLRNSGLGMAPVGLRGGS*PPQLLH
Trigger: GTGGAGCAGCTGAGGAGGGCAGGAACCGCCTCTCAG...CCCTACGGGAGCCATTCCCAATCCTGAGTTTCTCAGACTTGGCAATGGGGGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR GCA 90 bp CTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACAGAGCCCTGCCATATGTATTaGACAGGCCTCTTGCAGCCA +
Preference number: 2 (lower is better)
Translates to: LCNLSTWHPSPRPMPQTEPCHMY*TGLLQP
Trigger: TGGCTGCAAGAGGCCTGTGCAATACATATGGCAGGG...CTCTGTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638157.1
3UTR CAA 90 bp TGGATCAAGTGGGCGGCCAACCCTAGGAGTTTAGACTGGGCTCCCTaGATGCTTCTGTGTTCCCAAGAGAATGCCTGGGGAAGCCTGGGG +
Preference number: 2 (lower is better)
Translates to: WIKWAANPRSLDWAP*MLLCSQENAWGSLG
Trigger: CCCCAGGCTTCCCCAGGCATTCTCTTGGGAACACAGAAGCATCAAGGGAGCCCAGTCTAAACTCCTAGGGTTGGCCGCCCACTTGATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR GCA 90 bp AACTCCCTGCGGCCAGGTCTGCTCTGTCACTTGACTCCCAACAAAGAACCCTTTCTGAGAGGCGGTTCCTaGCCTCCTCAGCTGCTCCAC +
Preference number: 2 (lower is better)
Translates to: NSLRPGLLCHLTPNKEPFLRGGS*PPQLLH
Trigger: GTGGAGCAGCTGAGGAGGGCAGGAACCGCCTCTCAG...AAAGGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGACCTGGCCGCAGGGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR CAA 90 bp GAGACCAGAGCAGGATTTGTACTCCAACCCCCGCCAGAACCCCCATaGCCAAGTCTGAGAAACTCAGGATTGGGAATGGCTCCCGTAGGG +
Preference number: 2 (lower is better)
Translates to: ETRAGFVLQPPPEPP*PSLRNSGLGMAPVG
Trigger: CCCTACGGGAGCCATTCCCAATCCTGAGTTTCTCAGACTTGGCAATGGGGGTTCTGGCGGGGGTTGGAGTACAAATCCTGCTCTGGTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR TCA 90 bp GTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTAATGTTGGTTCGTTCAAAGAGGGGAGGTCGGTGCTaGGAGGCGGTTCCTGCCCTC +
Preference number: 2 (lower is better)
Translates to: VQTVSDSRLHWLMLVRSKRGGRC*EAVPAL
Trigger: GAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCT...CTTTGAACGAACCAACATTAGCCAGTGGAGACGACTGTCTGAGACAGTTTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CCA 90 bp GTGCTCACCACTCACAGTGTTCTGTGGGTAGACCCTGCACCCCGGACGTGGCAACCTAGGAGTTTAGACTaGGCTCCCTTGATGCTTCTG +
Preference number: 2 (lower is better)
Translates to: VLTTHSVLWVDPAPRTWQPRSLD*APLMLL
Trigger: CAGAAGCATCAAGGGAGCCCAGTCTAAACTCCTAGG...TTGCCACGTCCGGGGTGCAGGGTCTACCCACAGAACACTGTGAGTGGTGAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CCA 90 bp GCAAATGAGGCTGGCAACCCATCTTGGTGCTCACCACTCACAGTGTTCTGTGGGACGGTCTGGATCAAGTaGGCGGCCAACCCTAGGAGT +
Preference number: 2 (lower is better)
Translates to: ANEAGNPSWCSPLTVFCGTVWIK*AANPRS
Trigger: ACTCCTAGGGTTGGCCGCCCACTTGATCCAGACCGT...CCCACAGAACACTGTGAGTGGTGAGCACCAAGATGGGTTGCCAGCCTCATTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CCA 90 bp AACTCCCTGCGGCCAGGTCTGCTCTGTCACTTGACTCCCAACAAAGAACCCTTTCCCTCTCTCAAATCCTaGAGGGCCCAGCACACCCTG +
Preference number: 2 (lower is better)
Translates to: NSLRPGLLCHLTPNKEPFPSLKS*RAQHTL
Trigger: CAGGGTGTGCTGGGCCCTCCAGGATTTGAGAGAGGG...AAAGGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGACCTGGCCGCAGGGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR TCA 90 bp ATCCCTACCAGTGTCCCTCACCCAAAGGCCTGGACAAGAACTGAACAAGGACCCAGGAAGGTGCAGGGGTaGTGGAGGAGAGTATCCTTC +
Preference number: 2 (lower is better)
Translates to: IPTSVPHPKAWTRTEQGPRKVQG*WRRVSF
Trigger: GAAGGATACTCTCCTCCATCACCCCTGCACCTTCCT...GGGTCCTTGTTCAGTTCTTGTCCAGGCCTTTGGGTGAGGGACACTGGTAGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR TCA 90 bp TTGACTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACTTAGGCACTAAAAAGTaGCACTTCGCCCAGATCCAG +
Preference number: 2 (lower is better)
Translates to: LTMQSQHVAPKPQADAPDLGTKK*HFAQIQ
Trigger: CTGGATCTGGGCGAAGTGTCACTTTTTAGTGCCTAA...GTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAGTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR TCA 90 bp GGGAATAGTTTTGGCTTCTGGCTGTGCCAAGGGGGAGATTTCCAGCAGTCTGCAGGCCTGGACAAGAACTaGACAAGGACCCACTGGGCT +
Preference number: 2 (lower is better)
Translates to: GNSFGFWLCQGGDFQQSAGLDKN*TRTHWA
Trigger: AGCCCAGTGGGTCCTTGTTCAGTTCTTGTCCAGGCC...TGCAGACTGCTGGAAATCTCCCCCTTGGCACAGCCAGAAGCCAAAACTATTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CCA 90 bp GCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATACACTCAGTACGGTCTaGATCAAGTGGGCGGCCAAC +
Preference number: 2 (lower is better)
Translates to: ASCLAWSRGHPFASAMSYTLSTV*IKWAAN
Trigger: GTTGGCCGCCCACTTGATCCAGACCGTACTGAGTGT...ATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CCA 90 bp GTACTAGCAGTAAGTTTTCTGACCTTGCGCACAGCGCCAGGCAAAGTACAGTTACCTGCACCCCGGACGTaGCAAGGGCCTTCTCTCCCT +
Preference number: 2 (lower is better)
Translates to: VLAVSFLTLRTAPGKVQLPAPRT*QGPSLP
Trigger: AGGGAGAGAAGGCCCTTGCCACGTCCGGGGTGCAGG...TAACTGTACTTTGCCTGGCGCTGTGCGCAAGGTCAGAAAACTTACTGCTAGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR CAA 90 bp GCAAGGAGGGCTGAAGAACGACAATGTTCTTTAAGCCTTCAGATGTaGGGGAGATCGTCAGCATCAGCTCCTCCTGGCCGGCAAGGTGCT +
Preference number: 2 (lower is better)
Translates to: ARRAEERQCSLSLQM*GRSSASAPPGRQGA
Trigger: AGCACCTTGCCGGCCAGGAGGAGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTCTTCAGCCCTCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
3UTR CAA 90 bp CCCCAGACAGAGCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTaGCTTCTGCAATGTCTTATTGTATTGAGAGAAGCAAGGAGGGCT +
Preference number: 2 (lower is better)
Translates to: PQTEPAALPGAEATL*LLQCLIVLREARRA
Trigger: AGCCCTCCTTGCTTCTCTCAATACAATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGCTCTGTCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
3UTR-3UTR TCA 90 bp AGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAAGAAAGGGGAGGTCGGTGCTaGGAGGCGGTTCCTGCCCTC +
Preference number: 2 (lower is better)
Translates to: RVFAGITLAQHFPSKSQERGGRC*EAVPAL
Trigger: GAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCT...TTCTTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR TCA 90 bp ATGGCCAGACAACTCGACTGCACTCGACCCGTGTTCTTTCCCATAGATGGCCCAAGCATCCTCTCCATCTaGCACTCAGTACGGTCTGGA +
Preference number: 2 (lower is better)
Translates to: MARQLDCTRPVFFPIDGPSILSI*HSVRSG
Trigger: TCCAGACCGTACTGAGTGTCAGATGGAGAGGATGCT...TGGGCCATCTATGGGAAAGAACACGGGTCGAGTGCAGTCGAGTTGTCTGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR TCA 90 bp GACTTGCCCAAGGCCACAGAGCTTAGTCAATGGAAAAGTCAGGACCCAGGCTCAGCCCAGAGGGCCCCGTaGATTCAGATAAATGCATGG +
Preference number: 2 (lower is better)
Translates to: DLPKATELSQWKSQDPGSAQRAP*IQINAW
Trigger: CCATGCATTTATCTGAATTCACGGGGCCCTCTGGGC...TGAGCCTGGGTCCTGACTTTTCCATTGACTAAGCTCTGTGGCCTTGGGCAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR GCA 90 bp GGGAATAGTTTTGGCTTCTGGCTGTGCCAAGGGGGAGATTTCCAGCAGTCTGCACCTGCCCTCCTCAGCTaGTCCACCATAAGAAAACGC +
Preference number: 2 (lower is better)
Translates to: GNSFGFWLCQGGDFQQSAPALLS*STIRKR
Trigger: GCGTTTTCTTATGGTGGAGCAGCTGAGGAGGGCAGG...TGCAGACTGCTGGAAATCTCCCCCTTGGCACAGCCAGAAGCCAAAACTATTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR GCA 90 bp GACTTGCCCAAGGCCACAGAGCTTAGTCAATGGAAAAGTCAGGACCCAGGCTCAAATCTCCACAAGCTCTaGCTGGAGCTGGTGGGACTC +
Preference number: 2 (lower is better)
Translates to: DLPKATELSQWKSQDPGSNLHKL*LELVGL
Trigger: GAGTCCCACCAGCTCCAGGCAGAGCTTGTGGAGATT...TGAGCCTGGGTCCTGACTTTTCCATTGACTAAGCTCTGTGGCCTTGGGCAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CCA 90 bp GACTTGCCCAAGGCCACAGAGCTTAGTCAATGGAAAAGTCAGGACCCAGGCTCAGATCTTACACCTCTGTaGGGCCAGAGACCAGAGCAG +
Preference number: 2 (lower is better)
Translates to: DLPKATELSQWKSQDPGSDLTPL*GQRPEQ
Trigger: CTGCTCTGGTCTCTGGCCCCACAGAGGTGTAAGATC...TGAGCCTGGGTCCTGACTTTTCCATTGACTAAGCTCTGTGGCCTTGGGCAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CCA 90 bp AGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATTGTTCACCCTGGGTCTCCTaGGAATGCAGACACTGCCCT +
Preference number: 2 (lower is better)
Translates to: SCLAWSRGHPFASAMSYCSPWVS*ECRHCP
Trigger: AGGGCAGTGTCTGCATTCCCAGGAGACCCAGGGTGA...ACAATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CCA 90 bp TTGACTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACATGTCAAGTGGTGAATaGGATGATTGTCCCATAGCC +
Preference number: 2 (lower is better)
Translates to: LTMQSQHVAPKPQADAPDMSSGE*DDCPIA
Trigger: GGCTATGGGACAATCATCCCATTCACCACTTGACAT...GTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
3UTR-3UTR TCA 90 bp AACTCCCTGCGGCCAGGTCTGCTCTGTCACTTGACTCCCAACAAAGAACCCTTTAGCATCCTCTCCATCTaGCACTCAGTACGGTCTGGA +
Preference number: 2 (lower is better)
Translates to: NSLRPGLLCHLTPNKEPFSILSI*HSVRSG
Trigger: TCCAGACCGTACTGAGTGTCAGATGGAGAGGATGCT...AAAGGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGACCTGGCCGCAGGGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR GCA 90 bp GACTTGCCCAAGGCCACAGAGCTTAGTCAATGGAAAAGTCAGGACCCAGGCTCAGGCAACCCATCTTGGTaGTCACCACTCACAGTGTTC +
Preference number: 2 (lower is better)
Translates to: DLPKATELSQWKSQDPGSGNPSW*SPLTVF
Trigger: GAACACTGTGAGTGGTGAGCACCAAGATGGGTTGCC...TGAGCCTGGGTCCTGACTTTTCCATTGACTAAGCTCTGTGGCCTTGGGCAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR GCA 90 bp GGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACCTTGCGCACGGGAGGCCAGAGCCCTaGCATATGTATTGCACAGGC +
Preference number: 2 (lower is better)
Translates to: GQPCVFLGTSSKFSDLAHGRPEP*HMYCTG
Trigger: GCCTGTGCAATACATATGGCAGGGCTCTGGCCTCCC...GTGCGCAAGGTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638157.1
3UTR-3UTR CCA 90 bp GGGAATAGTTTTGGCTTCTGGCTGTGCCAAGGGGGAGATTTCCAGCAGTCTGCAAGCTCTGCCTGGAGCTaGTGGGACTCTTTTGGTCAT +
Preference number: 2 (lower is better)
Translates to: GNSFGFWLCQGGDFQQSASSAWS*WDSFGH
Trigger: ATGACCAAAAGAGTCCCACCAGCTCCAGGCAGAGCT...TGCAGACTGCTGGAAATCTCCCCCTTGGCACAGCCAGAAGCCAAAACTATTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CCA 90 bp AACTCCCTGCGGCCAGGTCTGCTCTGTCACTTGACTCCCAACAAAGAACCCTTTAGCTCTGCCTGGAGCTaGTGGGACTCTTTTGGTCAT +
Preference number: 2 (lower is better)
Translates to: NSLRPGLLCHLTPNKEPFSSAWS*WDSFGH
Trigger: ATGACCAAAAGAGTCCCACCAGCTCCAGGCAGAGCT...AAAGGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGACCTGGCCGCAGGGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CCA 90 bp GACTTGCCCAAGGCCACAGAGCTTAGTCAATGGAAAAGTCAGGACCCAGGCTCACCTTGGAGGATCACCTaGGCATGGACCTTCCTGTTT +
Preference number: 2 (lower is better)
Translates to: DLPKATELSQWKSQDPGSPWRIT*AWTFLF
Trigger: AAACAGGAAGGTCCATGCCCAGGTGATCCTCCAAGG...TGAGCCTGGGTCCTGACTTTTCCATTGACTAAGCTCTGTGGCCTTGGGCAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR TCA 90 bp AGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATTGTAGCATCCTCTCCATCTaGCACTCAGTACGGTCTGGA +
Preference number: 2 (lower is better)
Translates to: SCLAWSRGHPFASAMSYCSILSI*HSVRSG
Trigger: TCCAGACCGTACTGAGTGTCAGATGGAGAGGATGCT...ACAATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR TCA 90 bp GGGAATAGTTTTGGCTTCTGGCTGTGCCAAGGGGGAGATTTCCAGCAGTCTGCACGTTCAAAGAGCAAATaGGGCTGGCAACCCATCTTG +
Preference number: 2 (lower is better)
Translates to: GNSFGFWLCQGGDFQQSARSKSK*GWQPIL
Trigger: CAAGATGGGTTGCCAGCCTCATTTGCTCTTTGAACG...TGCAGACTGCTGGAAATCTCCCCCTTGGCACAGCCAGAAGCCAAAACTATTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR TCA 90 bp GACTTGCCCAAGGCCACAGAGCTTAGTCAATGGAAAAGTCAGGACCCAGGCTCACTGATCTTGCTGGCCTaGGATGTAATCCTCTTGTCC +
Preference number: 2 (lower is better)
Translates to: DLPKATELSQWKSQDPGSLILLA*DVILLS
Trigger: GGACAAGAGGATTACATCTCAGGCCAGCAAGATCAG...TGAGCCTGGGTCCTGACTTTTCCATTGACTAAGCTCTGTGGCCTTGGGCAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR GCA 90 bp AGTTTTGGCTTCTGGCTGTGCCAAGGGGGAGATTTCCAGCAGTCTGCACCATGCCACTTGGCCTTTTCCTaGCCAAACACATGCACCTTT +
Preference number: 2 (lower is better)
Translates to: SFGFWLCQGGDFQQSAPCHLAFS*PNTCTF
Trigger: AAAGGTGCATGTGTTTGGGCAGGAAAAGGCCAAGTG...GCATGGTGCAGACTGCTGGAAATCTCCCCCTTGGCACAGCCAGAAGCCAAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CCA 90 bp CACATGCACCTTTGCCAAATCCTTCCCTCCAGTGGCTCAGATGCTTTTTCTATGACTCACAGTGTTCTGTaGGTAGACCCTGCACCCCGG +
Preference number: 2 (lower is better)
Translates to: HMHLCQILPSSGSDAFSMTHSVL*VDPAPR
Trigger: CCGGGGTGCAGGGTCTACCCACAGAACACTGTGAGT...CATAGAAAAAGCATCTGAGCCACTGGAGGGAAGGATTTGGCAAAGGTGCATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CCA 90 bp TGGGCTGTGGGCATAGGCACTCTTCACAGGGATTACATGAAACTGCATTTCCTCGATCTTACACCTCTGTaGGGCCAGAGACCAGAGCAG +
Preference number: 2 (lower is better)
Translates to: WAVGIGTLHRDYMKLHFLDLTPL*GQRPEQ
Trigger: CTGCTCTGGTCTCTGGCCCCACAGAGGTGTAAGATC...GAGGAAATGCAGTTTCATGTAATCCCTGTGAAGAGTGCCTATGCCCACAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CCA 90 bp ATCCCTACCAGTGTCCCTCACCCAAAGGCCTGGACAAGAACTGAACAAGGACCCAGGATCACCTGGGCATaGACCTTCCTGTTTTCTGAT +
Preference number: 2 (lower is better)
Translates to: IPTSVPHPKAWTRTEQGPRITWA*TFLFSD
Trigger: ATCAGAAAACAGGAAGGTCCATGCCCAGGTGATCCT...GGGTCCTTGTTCAGTTCTTGTCCAGGCCTTTGGGTGAGGGACACTGGTAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CCA 90 bp AACTCCCTGCGGCCAGGTCTGCTCTGTCACTTGACTCCCAACAAAGAACCCTTTAATAGTTTTGGCTTCTaGCTGTGCCAAGGGGGAGAT +
Preference number: 2 (lower is better)
Translates to: NSLRPGLLCHLTPNKEPFNSFGF*LCQGGD
Trigger: ATCTCCCCCTTGGCACAGCCAGAAGCCAAAACTATT...AAAGGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGACCTGGCCGCAGGGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR TCA 90 bp TTCTATGTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTAATGTTGGTTCGTAGGAAGGTGCAGGGGTaGTGGAGGAGAGTATCCTTC +
Preference number: 2 (lower is better)
Translates to: FYVQTVSDSRLHWLMLVRRKVQG*WRRVSF
Trigger: GAAGGATACTCTCCTCCATCACCCCTGCACCTTCCT...ACGAACCAACATTAGCCAGTGGAGACGACTGTCTGAGACAGTTTGCACATAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR TCA 90 bp GGGAATAGTTTTGGCTTCTGGCTGTGCCAAGGGGGAGATTTCCAGCAGTCTGCAATGCTGAAAAGGCCCTaGATGTCTCACTCTTTGAAG +
Preference number: 2 (lower is better)
Translates to: GNSFGFWLCQGGDFQQSAMLKRP*MSHSLK
Trigger: CTTCAAAGAGTGAGACATTCAGGGCCTTTTCAGCAT...TGCAGACTGCTGGAAATCTCCCCCTTGGCACAGCCAGAAGCCAAAACTATTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR TCA 90 bp GGGAATAGTTTTGGCTTCTGGCTGTGCCAAGGGGGAGATTTCCAGCAGTCTGCAACAGTAGTTAGTGTATaGGGGATGATGAATGTGCCC +
Preference number: 2 (lower is better)
Translates to: GNSFGFWLCQGGDFQQSATVVSV*GMMNVP
Trigger: GGGCACATTCATCATCCCTCATACACTAACTACTGT...TGCAGACTGCTGGAAATCTCCCCCTTGGCACAGCCAGAAGCCAAAACTATTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR GCA 90 bp ACCTTAAGCAATGCCGTCTTAAGACTTCTTTTTGAGACCTTAGGGTCTTCGCAGACCATAAGAAAACGCTaGTCCGGCCAGCACAGGGCG +
Preference number: 2 (lower is better)
Translates to: TLSNAVLRLLFETLGSSQTIRKR*SGQHRA
Trigger: CGCCCTGTGCTGGCCGGAGCAGCGTTTTCTTATGGT...CTGCGAAGACCCTAAGGTCTCAAAAAGAAGTCTTAAGACGGCATTGCTTAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR GCA 90 bp CTGTACTTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGCCTGCCCTCCTCAGCTaGTCCACCATAAGAAAACGC +
Preference number: 2 (lower is better)
Translates to: LYFHGSSYFTLRFGWAALPALLS*STIRKR
Trigger: GCGTTTTCTTATGGTGGAGCAGCTGAGGAGGGCAGG...CAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAAGTACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR GCA 90 bp GAACCCCCATTGCCAAGTCTGAGAAACTCAGGATTGGGAATGGCTCCCGTAGGGCTCCAGTGGCTCAGATaGTTTTTCTATGTGCAAACT +
Preference number: 2 (lower is better)
Translates to: EPPLPSLRNSGLGMAPVGLQWLR*FFYVQT
Trigger: AGTTTGCACATAGAAAAAGCATCTGAGCCACTGGAG...CCCTACGGGAGCCATTCCCAATCCTGAGTTTCTCAGACTTGGCAATGGGGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CCA 90 bp TTGAGTTGGGGAAAAAGCACCATGGGTTTGGGAAGATGGTCTGGTCCATGCAGATCTAAAAGCCAAGAATaGCCAGCAAGGGAAGGGGTG +
Preference number: 2 (lower is better)
Translates to: LSWGKSTMGLGRWSGPCRSKSQE*PAREGV
Trigger: CACCCCTTCCCTTGCTGGCCATTCTTGGCTTTTAGA...TCTGCATGGACCAGACCATCTTCCCAAACCCATGGTGCTTTTTCCCCAACTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CCA 90 bp GGGAATAGTTTTGGCTTCTGGCTGTGCCAAGGGGGAGATTTCCAGCAGTCTGCACAGAGAGAAAGCGGGTaGGAAAGTAAGAAATTCCCA +
Preference number: 2 (lower is better)
Translates to: GNSFGFWLCQGGDFQQSAQRESG*ESKKFP
Trigger: TGGGAATTTCTTACTTTCCCACCCGCTTTCTCTCTG...TGCAGACTGCTGGAAATCTCCCCCTTGGCACAGCCAGAAGCCAAAACTATTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CCA 90 bp GACTTGCCCAAGGCCACAGAGCTTAGTCAATGGAAAAGTCAGGACCCAGGCTCAGAAAACGCTCCACCCTaGCTAATAAACAATGTGCTC +
Preference number: 2 (lower is better)
Translates to: DLPKATELSQWKSQDPGSENAPP*LINNVL
Trigger: GAGCACATTGTTTATTAGCCAGGGTGGAGCGTTTTC...TGAGCCTGGGTCCTGACTTTTCCATTGACTAAGCTCTGTGGCCTTGGGCAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CCA 90 bp GACTCTTTCATGAATCTCCACAAGCTCTGCCTGGAGCTGGTGGGACTCTTTTGGGACAGTCGTCTCCACTaGCTAATGTTGGTTCGTTCA +
Preference number: 2 (lower is better)
Translates to: DSFMNLHKLCLELVGLFWDSRLH*LMLVRS
Trigger: TGAACGAACCAACATTAGCCAGTGGAGACGACTGTC...CCAAAAGAGTCCCACCAGCTCCAGGCAGAGCTTGTGGAGATTCATGAAAGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CCA 90 bp GGGAATAGTTTTGGCTTCTGGCTGTGCCAAGGGGGAGATTTCCAGCAGTCTGCAGGCATAGATTTCACTTaGCCTTTTCCTGCCCAAACA +
Preference number: 2 (lower is better)
Translates to: GNSFGFWLCQGGDFQQSAGIDFT*PFPAQT
Trigger: TGTTTGGGCAGGAAAAGGCCAAGTGAAATCTATGCC...TGCAGACTGCTGGAAATCTCCCCCTTGGCACAGCCAGAAGCCAAAACTATTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CCA 90 bp ACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCCTCCAGCTCTGCCTGGAGCTaGTGGGACTCTTTTGGTCAT +
Preference number: 2 (lower is better)
Translates to: TMFFKPSDVGEIVSISSSSSAWS*WDSFGH
Trigger: ATGACCAAAAGAGTCCCACCAGCTCCAGGCAGAGCT...GGAGGAGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR CAA 90 bp AGAAACTCAGGATTGGGAATGGCTCCCGTAGGGCATAGATTTCACTaGGCCTTTTCCTGCCCAAACACATGCACCTTTGCCAAATCCTTC +
Preference number: 2 (lower is better)
Translates to: RNSGLGMAPVGHRFH*AFSCPNTCTFAKSF
Trigger: GAAGGATTTGGCAAAGGTGCATGTGTTTGGGCAGGAAAAGGCCAAGTGAAATCTATGCCCTACGGGAGCCATTCCCAATCCTGAGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR TCA 90 bp CACATGCACCTTTGCCAAATCCTTCCCTCCAGTGGCTCAGATGCTTTTTCTATGCGTTCAAAGAGCAAATaGGGCTGGCAACCCATCTTG +
Preference number: 2 (lower is better)
Translates to: HMHLCQILPSSGSDAFSMRSKSK*GWQPIL
Trigger: CAAGATGGGTTGCCAGCCTCATTTGCTCTTTGAACG...CATAGAAAAAGCATCTGAGCCACTGGAGGGAAGGATTTGGCAAAGGTGCATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR TCA 90 bp GACTTGCCCAAGGCCACAGAGCTTAGTCAATGGAAAAGTCAGGACCCAGGCTCAAAGAATAAGCAAGACTaGAGACCTCTGCATGCCAAA +
Preference number: 2 (lower is better)
Translates to: DLPKATELSQWKSQDPGSKNKQD*RPLHAK
Trigger: TTTGGCATGCAGAGGTCTTCAGTCTTGCTTATTCTT...TGAGCCTGGGTCCTGACTTTTCCATTGACTAAGCTCTGTGGCCTTGGGCAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR GCA 90 bp TTTGGGAAGATGGTCTGGTCCATGCAGAGAGTGGTCTGGCCCTTGAGTGCAGGGAAGCACCTTAAGCAATaGCGTCTTAAGACTTCTTTT +
Preference number: 2 (lower is better)
Translates to: FGKMVWSMQRVVWPLSAGKHLKQ*RLKTSF
Trigger: AAAAGAAGTCTTAAGACGGCATTGCTTAAGGTGCTT...CCCTGCACTCAAGGGCCAGACCACTCTCTGCATGGACCAGACCATCTTCCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR GCA 90 bp GATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAACTCCCTCCTGTGCAGCAGTCTGCACCATaGCTCCTTCTTTGGCTCAGA +
Preference number: 2 (lower is better)
Translates to: DVKARTYLKDDLAQLPPVQQSAP*LLLWLR
Trigger: TCTGAGCCAAAGAAGGAGGCATGGTGCAGACTGCTG...CACAGGAGGGAGTTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR CAA 90 bp GGCATAGATTTCACTTGGCCTTTTCCTGCCCAAACACATGCACCTTaGCCAAATCCTTCCCTCCAGTGGCTCAGATGCTTTTTCTATGTG +
Preference number: 2 (lower is better)
Translates to: GIDFTWPFPAQTHAP*PNPSLQWLRCFFYV
Trigger: CACATAGAAAAAGCATCTGAGCCACTGGAGGGAAGGATTTGGCAAAGGTGCATGTGTTTGGGCAGGAAAAGGCCAAGTGAAATCTATGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR TCA 90 bp GATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAACTCCCTCCTGTGGTCTGCTCTGTCACTTaGCTCCCAACAAAGAACCCT +
Preference number: 2 (lower is better)
Translates to: DVKARTYLKDDLAQLPPVVCSVT*LPTKNP
Trigger: AGGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGAC...CACAGGAGGGAGTTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR GCA 90 bp GCATCTTCTAGAAGAAAACACAGAGGTGAAGAGGATTGGGGCCAACCTGCTGGATCTATGTACATGTATTaGACAGGCCTCTTGCAGCCA +
Preference number: 2 (lower is better)
Translates to: ASSRRKHRGEEDWGQPAGSMYMY*TGLLQP
Trigger: TGGCTGCAAGAGGCCTGTGCAATACATGTACATAGA...TCCAGCAGGTTGGCCCCAATCCTCTTCACCTCTGTGTTTTCTTCTAGAAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR GCA 90 bp AGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATTGTGTGAATTCAGATAAATaGATGGTGCTAGTGGGCCAA +
Preference number: 2 (lower is better)
Translates to: SCLAWSRGHPFASAMSYCVNSDK*MVLVGQ
Trigger: TTGGCCCACTAGCACCATGCATTTATCTGAATTCAC...ACAATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR CAA 90 bp CCAAAGAGGTGGATGAGGAAGGGAGAGAGTCGCACCATGATTAGCTaGTCTGAGGCCAGTCTTGTCAATTCTTTCACAGTAAGCTGTAAT +
Preference number: 2 (lower is better)
Translates to: PKRWMRKGESRTMIS*SEASLVNSFTVSCN
Trigger: ATTACAGCTTACTGTGAAAGAATTGACAAGACTGGCCTCAGACAAGCTAATCATGGTGCGACTCTCTCCCTTCCTCATCCACCTCTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR CAA 90 bp CCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATTGTATaGAGAGAAGCAAGGAGGGCTGAAGAACGACAATGTTCTTTAAGC +
Preference number: 2 (lower is better)
Translates to: PGAEATLLLLQCLIV*REARRAEERQCSLS
Trigger: GCTTAAAGAACATTGTCGTTCTTCAGCCCTCCTTGCTTCTCTCAATACAATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
3UTR-3UTR TCA 90 bp AACTCCCTGCGGCCAGGTCTGCTCTGTCACTTGACTCCCAACAAAGAACCCTTTTATCTTTGGGGTAGATaGGTGATAAAATCTTCTGTC +
Preference number: 2 (lower is better)
Translates to: NSLRPGLLCHLTPNKEPFYLWGR*VIKSSV
Trigger: GACAGAAGATTTTATCACTCATCTACCCCAAAGATA...AAAGGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGACCTGGCCGCAGGGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR TCA 90 bp GAACCCTTTTTAAGTCATCCCAAAGGTCCCACCGTGGCACCTTTAATAATTAAATTGGCTCAGAGCCCATaGGCCTTGATCCCTACCAGT +
Preference number: 2 (lower is better)
Translates to: EPFLSHPKGPTVAPLIIKLAQSP*ALIPTS
Trigger: ACTGGTAGGGATCAAGGCTCATGGGCTCTGAGCCAA...TTTAATTATTAAAGGTGCCACGGTGGGACCTTTGGGATGACTTAAAAAGGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR GCA 90 bp AACCCCCAAGATGATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAAATCTGGGGTTTCTTCTaGCCCTGTGTCAAGAAGCCC +
Preference number: 2 (lower is better)
Translates to: NPQDDVKARTYLKDDLAQIWGFF*PCVKKP
Trigger: GGGCTTCTTGACACAGGGGCAGAAGAAACCCCAGAT...TTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATCATCTTGGGGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR GCA 90 bp TGTCTTATTGTATTGAGAGAAGCAAGGAGGGCTGAAGAACGACAATGTTCTTTAATCCACTCTAGCTCATaGCCTGGAGCCTCCTCACCC +
Preference number: 2 (lower is better)
Translates to: CLIVLREARRAEERQCSLIHSSS*PGASSP
Trigger: GGGTGAGGAGGCTCCAGGGCATGAGCTAGAGTGGAT...TAAAGAACATTGTCGTTCTTCAGCCCTCCTTGCTTCTCTCAATACAATAAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CCA 90 bp ACCTTAAGCAATGCCGTCTTAAGACTTCTTTTTGAGACCTTAGGGTCTTCGCAGCCCGCTCCTTCTCCCTaGTACATAGGCATTATCTCT +
Preference number: 2 (lower is better)
Translates to: TLSNAVLRLLFETLGSSQPAPSP*YIGIIS
Trigger: AGAGATAATGCCTATGTACCAGGGAGAAGGAGCGGG...CTGCGAAGACCCTAAGGTCTCAAAAAGAAGTCTTAAGACGGCATTGCTTAAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CCA 90 bp ACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCCTCCATGTCAAGTGGTGAATaGGATGATTGTCCCATAGCC +
Preference number: 2 (lower is better)
Translates to: TMFFKPSDVGEIVSISSSMSSGE*DDCPIA
Trigger: GGCTATGGGACAATCATCCCATTCACCACTTGACAT...GGAGGAGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
3UTR-3UTR TCA 90 bp GGTTGGGGGAATGAAAGTCAAGGATGTCAAGGATGTCAAGTGGTGAATGGGATGCTTAAGACTTCTTTTTaGGACCTTAGGGTCTTCGCA +
Preference number: 2 (lower is better)
Translates to: GWGNESQGCQGCQVVNGMLKTSF*DLRVFA
Trigger: TGCGAAGACCCTAAGGTCTCAAAAAGAAGTCTTAAG...CATCCCATTCACCACTTGACATCCTTGACATCCTTGACTTTCATTCCCCCAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR TCA 90 bp TACTTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTAAGGGGATTAGGGAATaGAGCACCTTAAGCAATGCC +
Preference number: 2 (lower is better)
Translates to: YFHGSSYFTLRFGWAALCKGIRE*STLSNA
Trigger: GGCATTGCTTAAGGTGCTTCATTCCCTAATCCCCTT...ACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR TCA 90 bp TACTTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTTTAGGCACTAAAAAGTaGCACTTCGCCCAGATCCAG +
Preference number: 2 (lower is better)
Translates to: YFHGSSYFTLRFGWAALCLGTKK*HFAQIQ
Trigger: CTGGATCTGGGCGAAGTGTCACTTTTTAGTGCCTAA...ACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR TCA 90 bp ACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCCTCCTCTTTCGCAAGCTATTaGCTAAGGGGGAAGAGATTT +
Preference number: 2 (lower is better)
Translates to: TMFFKPSDVGEIVSISSSSFASY*LRGKRF
Trigger: AAATCTCTTCCCCCTTAGTCAATAGCTTGCGAAAGA...GGAGGAGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR GCA 90 bp GACTCTTTCATGAATCTCCACAAGCTCTGCCTGGAGCTGGTGGGACTCTTTTGGAAGCACCTTAAGCAATaGCGTCTTAAGACTTCTTTT +
Preference number: 2 (lower is better)
Translates to: DSFMNLHKLCLELVGLFWKHLKQ*RLKTSF
Trigger: AAAAGAAGTCTTAAGACGGCATTGCTTAAGGTGCTT...CCAAAAGAGTCCCACCAGCTCCAGGCAGAGCTTGTGGAGATTCATGAAAGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR CAA 90 bp ATAAAAGCACTGGCTGGAAGAAGTTACATAAGAAGTAGTGATGTTTaGATGCTCCCTTGTAGACAGCAACTAGCCAGGCAAATGGCCAGG +
Preference number: 2 (lower is better)
Translates to: IKALAGRSYIRSSDV*MLPCRQQLARQMAR
Trigger: CCTGGCCATTTGCCTGGCTAGTTGCTGTCTACAAGGGAGCATCAAAACATCACTACTTCTTATGTAACTTCTTCCAGCCAGTGCTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR TCA 90 bp GAACCCTTTTTAAGTCATCCCAAAGGTCCCACCGTGGCACCTTTAATAATTAAACCCCATTGCCAAGTCTaGGAAACTCAGGATTGGGAA +
Preference number: 2 (lower is better)
Translates to: EPFLSHPKGPTVAPLIIKPHCQV*ETQDWE
Trigger: TTCCCAATCCTGAGTTTCTCAGACTTGGCAATGGGG...TTTAATTATTAAAGGTGCCACGGTGGGACCTTTGGGATGACTTAAAAAGGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR TCA 90 bp GATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAACTCCCTCCTGTGACTTATCTGCAAGGGTaGGTTAAGATGTCTTTCGCA +
Preference number: 2 (lower is better)
Translates to: DVKARTYLKDDLAQLPPVTYLQG*VKMSFA
Trigger: TGCGAAAGACATCTTAACTCACCCTTGCAGATAAGT...CACAGGAGGGAGTTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR TCA 90 bp ACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCCTCCCTTCTAAGTGAATACTaGGCAATACATCAAGCTCGA +
Preference number: 2 (lower is better)
Translates to: TMFFKPSDVGEIVSISSSLLSEY*AIHQAR
Trigger: TCGAGCTTGATGTATTGCTCAGTATTCACTTAGAAG...GGAGGAGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR GCA 90 bp TGTCTTATTGTATTGAGAGAAGCAAGGAGGGCTGAAGAACGACAATGTTCTTTAGGCAACCCATCTTGGTaGTCACCACTCACAGTGTTC +
Preference number: 2 (lower is better)
Translates to: CLIVLREARRAEERQCSLGNPSW*SPLTVF
Trigger: GAACACTGTGAGTGGTGAGCACCAAGATGGGTTGCC...TAAAGAACATTGTCGTTCTTCAGCCCTCCTTGCTTCTCTCAATACAATAAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR GCA 90 bp GATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAACTCCCTCCTGTGCTCCAGTGGCTCAGATaGTTTTTCTATGTGCAAACT +
Preference number: 2 (lower is better)
Translates to: DVKARTYLKDDLAQLPPVLQWLR*FFYVQT
Trigger: AGTTTGCACATAGAAAAAGCATCTGAGCCACTGGAG...CACAGGAGGGAGTTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CCA 90 bp GAACCCTTTTTAAGTCATCCCAAAGGTCCCACCGTGGCACCTTTAATAATTAAATCTGCCTGGAGCTGGTaGGACTCTTTTGGTCATTAC +
Preference number: 2 (lower is better)
Translates to: EPFLSHPKGPTVAPLIIKSAWSW*DSFGHY
Trigger: GTAATGACCAAAAGAGTCCCACCAGCTCCAGGCAGA...TTTAATTATTAAAGGTGCCACGGTGGGACCTTTGGGATGACTTAAAAAGGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CCA 90 bp TGTCTTATTGTATTGAGAGAAGCAAGGAGGGCTGAAGAACGACAATGTTCTTTAGACATCTGGGACATCTaGGGTTTCTTCTGCCCCTGT +
Preference number: 2 (lower is better)
Translates to: CLIVLREARRAEERQCSLDIWDI*GFFCPC
Trigger: ACAGGGGCAGAAGAAACCCCAGATGTCCCAGATGTC...TAAAGAACATTGTCGTTCTTCAGCCCTCCTTGCTTCTCTCAATACAATAAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR TCA 90 bp GAACCCTTTTTAAGTCATCCCAAAGGTCCCACCGTGGCACCTTTAATAATTAAAAAGGGGATTAGGGAATaGAGCACCTTAAGCAATGCC +
Preference number: 2 (lower is better)
Translates to: EPFLSHPKGPTVAPLIIKKGIRE*STLSNA
Trigger: GGCATTGCTTAAGGTGCTTCATTCCCTAATCCCCTT...TTTAATTATTAAAGGTGCCACGGTGGGACCTTTGGGATGACTTAAAAAGGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR TCA 90 bp GAACCCTTTTTAAGTCATCCCAAAGGTCCCACCGTGGCACCTTTAATAATTAAAATGCTGAAAAGGCCCTaGATGTCTCACTCTTTGAAG +
Preference number: 2 (lower is better)
Translates to: EPFLSHPKGPTVAPLIIKMLKRP*MSHSLK
Trigger: CTTCAAAGAGTGAGACATTCAGGGCCTTTTCAGCAT...TTTAATTATTAAAGGTGCCACGGTGGGACCTTTGGGATGACTTAAAAAGGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR TCA 90 bp TGTCTTATTGTATTGAGAGAAGCAAGGAGGGCTGAAGAACGACAATGTTCTTTAGCTATGACTCTTTCATaGATCTCCACAAGCTCTGCC +
Preference number: 2 (lower is better)
Translates to: CLIVLREARRAEERQCSLAMTLS*ISTSSA
Trigger: GGCAGAGCTTGTGGAGATTCATGAAAGAGTCATAGC...TAAAGAACATTGTCGTTCTTCAGCCCTCCTTGCTTCTCTCAATACAATAAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR GCA 90 bp ACACATGCACCTTTGCCAAATCCTTCCCTCCAGTGGCTCAGATGCTTTTTCTATAAGCACCTTAAGCAATaGCGTCTTAAGACTTCTTTT +
Preference number: 2 (lower is better)
Translates to: THAPLPNPSLQWLRCFFYKHLKQ*RLKTSF
Trigger: AAAAGAAGTCTTAAGACGGCATTGCTTAAGGTGCTT...ATAGAAAAAGCATCTGAGCCACTGGAGGGAAGGATTTGGCAAAGGTGCATGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR GCA 90 bp GAACCCTTTTTAAGTCATCCCAAAGGTCCCACCGTGGCACCTTTAATAATTAAAAAACACATGCACCTTTaGCAAATCCTTCCCTCCAGT +
Preference number: 2 (lower is better)
Translates to: EPFLSHPKGPTVAPLIIKKHMHL*QILPSS
Trigger: ACTGGAGGGAAGGATTTGGCAAAGGTGCATGTGTTT...TTTAATTATTAAAGGTGCCACGGTGGGACCTTTGGGATGACTTAAAAAGGGTTC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR TCA 90 bp TGTCTTATTGTATTGAGAGAAGCAAGGAGGGCTGAAGAACGACAATGTTCTTTAGAAGATGAGCTCCATTaGAAAGAATGTTCTTCTCCC +
Preference number: 2 (lower is better)
Translates to: CLIVLREARRAEERQCSLEDELH*KECSSP
Trigger: GGGAGAAGAACATTCTTTTCAATGGAGCTCATCTTC...TAAAGAACATTGTCGTTCTTCAGCCCTCCTTGCTTCTCTCAATACAATAAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR GCA 90 bp AACCCCCAAGATGATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAATGGCCAGGAATACAATaGTATTTATTTGTTTCACTC +
Preference number: 2 (lower is better)
Translates to: NPQDDVKARTYLKDDLAQWPGIQ*YLFVSL
Trigger: GAGTGAAACAAATAAATAGCATTGTATTCCTGGCCA...TTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATCATCTTGGGGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR GCA 90 bp TGTCTTATTGTATTGAGAGAAGCAAGGAGGGCTGAAGAACGACAATGTTCTTTAGGAATCTACAAGTTTTaGATTCAAAACTTTCTGGGA +
Preference number: 2 (lower is better)
Translates to: CLIVLREARRAEERQCSLGIYKF*IQNFLG
Trigger: TCCCAGAAAGTTTTGAATGCAAAACTTGTAGATTCC...TAAAGAACATTGTCGTTCTTCAGCCCTCCTTGCTTCTCTCAATACAATAAGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CAA 90 bp GTGGGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCTATTGCACAGGCCTCTaGCAGCCACCCTGTTCCTGC +
Preference number: 3 (lower is better)
Translates to: VGGGRSGEVGAERRFLPSYCTGL*QPPCSC
Trigger: GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATA...GGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CAA 90 bp CTCCAGTCCTGGCTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGCCTCACCCTCCTCCCTaGGAGGATCACCTGGGCATG +
Preference number: 3 (lower is better)
Translates to: LQSWLQGLLRISSHKTPEPHPPP*EDHLGM
Trigger: CATGCCCAGGTGATCCTCCAAGGGAGGAGGGTGAGG...CTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAGCCAGGACTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CAA 90 bp TCTGTGGGTAGACCCTGCACCCCGGACGTGGCAAGGGCCTTCTCTCCCTCTCTCTATTGCACAGGCCTCTaGCAGCCACCCTGTTCCTGC +
Preference number: 3 (lower is better)
Translates to: SVGRPCTPDVARAFSPSLYCTGL*QPPCSC
Trigger: GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATA...GAGAGAGGGAGAGAAGGCCCTTGCCACGTCCGGGGTGCAGGGTCTACCCACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CAA 90 bp TTGACTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACGAGAGGGGGAGTGACTaGCCCAAGGCCACAGAGCTT +
Preference number: 3 (lower is better)
Translates to: LTMQSQHVAPKPQADAPDERGSD*PKATEL
Trigger: AAGCTCTGTGGCCTTGGGCAAGTCACTCCCCCTCTC...GTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAGTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR GCA 72 bp GAGATCGTCAGCATCAGCTCCTCCTGGCCGGCAAGGTaGTGCTCATCAGCTGCCAAGACTCCAGTCCTGGCT +
Preference number: 3 (lower is better)
Translates to: EIVSISSSWPAR*CSSAAKTPVLA
Trigger: AGCCAGGACTGGAGTCTTGGCAGCTGATGAGCAGCACCTTGCCGGCCAGGAGGAGCTGATGCTGACGATCTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
3UTR CCA 72 bp CAACCCATCTTGGTGCTCACCACTCACAGTGTTCTGTaGGTAGACCCTGCACCCCGGACGTGGCAAGGGCCT +
Preference number: 3 (lower is better)
Translates to: QPILVLTTHSVL*VDPAPRTWQGP
Trigger: AGGCCCTTGCCACGTCCGGGGTGCAGGGTCTACCCACAGAACACTGTGAGTGGTGAGCACCAAGATGGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR CCA 72 bp CAGGCCGATGCCCCAGACAGAGCCAGCTGCCTTGCCTaGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCT +
Preference number: 3 (lower is better)
Translates to: QADAPDRASCLA*SRGHPFASAMS
Trigger: AGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGCTCTGTCTGGGGCATCGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
3UTR-3UTR CAA 90 bp CTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGCTGTTGCACAGATATTGCACAGGCCTCTaGCAGCCACCCTGTTCCTGC +
Preference number: 3 (lower is better)
Translates to: LQGLLRISSHKTPELLHRYCTGL*QPPCSC
Trigger: GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATA...TCTGTGCAACAGCTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
3UTR-3UTR CAA 90 bp GCCAGCACAGGGCGCGGGAGGGCCCGCTCCTTCTCCCTGGTACATAGGCATTATGTCTATGTACATGTATaGCACAGGCCTCTTGCAGCC +
Preference number: 3 (lower is better)
Translates to: ASTGRGRARSFSLVHRHYVYVHV*HRPLAA
Trigger: GGCTGCAAGAGGCCTGTGCAATACATGTACATAGAC...ATAATGCCTATGTACCAGGGAGAAGGAGCGGGCCCTCCCGCGCCCTGTGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR CCA 72 bp CCTCTCCATCTGACACTCAGTACGGTCTGGATCAAGTaGGCGGCCAACCCTAGGAGTTTAGACTGGGCTCCC +
Preference number: 3 (lower is better)
Translates to: PLHLTLSTVWIK*AANPRSLDWAP
Trigger: GGGAGCCCAGTCTAAACTCCTAGGGTTGGCCGCCCACTTGATCCAGACCGTACTGAGTGTCAGATGGAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR CCA 72 bp GACGTGGCAAGGGCCTTCTCTCCCTCTCTCAAATCCTaGAGGGCCCAGCACACCCTGACTCATCCTGGAAAT +
Preference number: 3 (lower is better)
Translates to: DVARAFSPSLKS*RAQHTLTHPGN
Trigger: ATTTCCAGGATGAGTCAGGGTGTGCTGGGCCCTCCAGGATTTGAGAGAGGGAGAGAAGGCCCTTGCCACGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR CCA 72 bp TGGAGCCTCCTCACCCTCCTCCCTTGGAGGATCACCTaGGCATGGACCTTCCTGTTTTCTGATCCTGCCCTT +
Preference number: 3 (lower is better)
Translates to: WSLLTLLPWRIT*AWTFLFSDPAL
Trigger: AAGGGCAGGATCAGAAAACAGGAAGGTCCATGCCCAGGTGATCCTCCAAGGGAGGAGGGTGAGGAGGCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR CCA 72 bp GCCTTGATCCCTACCAGTGTCCCTCACCCAAAGGCCTaGACAAGAACTGAACAAGGACCCACTGGGCTGTGG +
Preference number: 3 (lower is better)
Translates to: ALIPTSVPHPKA*TRTEQGPTGLW
Trigger: CCACAGCCCAGTGGGTCCTTGTTCAGTTCTTGTCCAGGCCTTTGGGTGAGGGACACTGGTAGGGATCAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR CCA 72 bp TCAGATGTTGGGGAGATCGTCAGCATCAGCTCCTCCTaGCCGGCAAGGTGCTGCTCATCAGCTGCCAAGACT +
Preference number: 3 (lower is better)
Translates to: SDVGEIVSISSS*PARCCSSAAKT
Trigger: AGTCTTGGCAGCTGATGAGCAGCACCTTGCCGGCCAGGAGGAGCTGATGCTGACGATCTCCCCAACATCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
3UTR-3UTR CAA 90 bp TCTGTGGGTAGACCCTGCACCCCGGACGTGGCAAGGGCCTTCTCTCCCTCTCTCTTCGCAGGCATAACTTaGGCTCAACATTTCCCTTCT +
Preference number: 3 (lower is better)
Translates to: SVGRPCTPDVARAFSPSLFAGIT*AQHFPS
Trigger: AGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAA...GAGAGAGGGAGAGAAGGCCCTTGCCACGTCCGGGGTGCAGGGTCTACCCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CAA 90 bp TTGACTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACGGGCATAGATTTCACTaGGCCTTTTCCTGCCCAAAC +
Preference number: 3 (lower is better)
Translates to: LTMQSQHVAPKPQADAPDGHRFH*AFSCPN
Trigger: GTTTGGGCAGGAAAAGGCCAAGTGAAATCTATGCCC...GTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR TCA 72 bp GTCTGCACCATGCCTCCTTCTTTGGCTCAGAGCCCATaGGCCTTGATCCCTACCAGTGTCCCTCACCCAAAG +
Preference number: 3 (lower is better)
Translates to: VCTMPPSLAQSP*ALIPTSVPHPK
Trigger: CTTTGGGTGAGGGACACTGGTAGGGATCAAGGCTCATGGGCTCTGAGCCAAAGAAGGAGGCATGGTGCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR TCA 72 bp AGATGGTCTGGTCCATGCAGAGAGTGGTCTGGCCCTTaGGTGCAGGGTAGGAAAATGTGGGGAGCCACAAGC +
Preference number: 3 (lower is better)
Translates to: RWSGPCREWSGP*VQGRKMWGATS
Trigger: GCTTGTGGCTCCCCACATTTTCCTACCCTGCACTCAAGGGCCAGACCACTCTCTGCATGGACCAGACCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
3UTR CCA 72 bp GAGCTGTTGCACAGAACATCAAAACAGGGAGCTGGCTaGGCCCTTCACAGCCATGGCCAGAGCAGAAGTGAG +
Preference number: 3 (lower is better)
Translates to: ELLHRTSKQGAG*ALHSHGQSRSE
Trigger: CTCACTTCTGCTCTGGCCATGGCTGTGAAGGGCCCAGCCAGCTCCCTGTTTTGATGTTCTGTGCAACAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
3UTR TCA 72 bp TGCAGCCTTCCTAGCTTTCCAAGCATCCTCTCCATCTaGCACTCAGTACGGTCTGGATCAAGTGGGCGGCCA +
Preference number: 3 (lower is better)
Translates to: CSLPSFPSILSI*HSVRSGSSGRP
Trigger: TGGCCGCCCACTTGATCCAGACCGTACTGAGTGTCAGATGGAGAGGATGCTTGGAAAGCTAGGAAGGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR GCA 72 bp TCAGAACACGAGTCTCGGGAGCCTGCCACCACACAATaGAGCCTTCCTAGCTTTCCAAGCATCCTCTCCATC +
Preference number: 3 (lower is better)
Translates to: SEHESREPATTQ*SLPSFPSILSI
Trigger: GATGGAGAGGATGCTTGGAAAGCTAGGAAGGCTGCATTGTGTGGTGGCAGGCTCCCGAGACTCGTGTTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CAA 90 bp GACTCTTTCATGAATCTCCACAAGCTCTGCCTGGAGCTGGTGGGACTCTTTTGGGGCTGGCAACCCATCTaGGTGCTCACCACTCACAGT +
Preference number: 3 (lower is better)
Translates to: DSFMNLHKLCLELVGLFWGWQPI*VLTTHS
Trigger: ACTGTGAGTGGTGAGCACCAAGATGGGTTGCCAGCC...CCAAAAGAGTCCCACCAGCTCCAGGCAGAGCTTGTGGAGATTCATGAAAGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR TCA 72 bp CTCCCTCTCTCAAATCCTGGAGGGCCCAGCACACCCTaGCTCATCCTGGAAATCACACTGACAGCTCTAAGT +
Preference number: 3 (lower is better)
Translates to: LPLSNPGGPSTP*LILEITLTALS
Trigger: ACTTAGAGCTGTCAGTGTGATTTCCAGGATGAGTCAGGGTGTGCTGGGCCCTCCAGGATTTGAGAGAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR GCA 72 bp AGGACCCAGGCTCAGGTCTCCAAACCGTCAGTGCAGTaGTCTTACACAGAGCTTCAAGCAGCTGATCTTGCT +
Preference number: 3 (lower is better)
Translates to: RTQAQVSKPSVQ*SYTELQAADLA
Trigger: AGCAAGATCAGCTGCTTGAAGCTCTGTGTAAGAGCACTGCACTGACGGTTTGGAGACCTGAGCCTGGGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR CCA 72 bp TCCAAGCATCCTCTCCATCTGACACTCAGTACGGTCTaGATCAAGTGGGCGGCCAACCCTAGGAGTTTAGAC +
Preference number: 3 (lower is better)
Translates to: SKHPLHLTLSTV*IKWAANPRSLD
Trigger: GTCTAAACTCCTAGGGTTGGCCGCCCACTTGATCCAGACCGTACTGAGTGTCAGATGGAGAGGATGCTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR CCA 72 bp TTGGGGAAAAAGCACCATGGGTTTGGGAAGATGGTCTaGTCCATGCAGAGAGTGGTCTGGCCCTTGAGTGCA +
Preference number: 3 (lower is better)
Translates to: LGKKHHGFGKMV*SMQRVVWPLSA
Trigger: TGCACTCAAGGGCCAGACCACTCTCTGCATGGACCAGACCATCTTCCCAAACCCATGGTGCTTTTTCCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
3UTR CCA 72 bp GACCCATCCCTCCCCACCTTGGAGTCTAGGTTGAGTTaGGGAAAAAGCACCATGGGTTTGGGAAGATGGTCT +
Preference number: 3 (lower is better)
Translates to: DPSLPTLESRLS*GKSTMGLGRWS
Trigger: AGACCATCTTCCCAAACCCATGGTGCTTTTTCCCCAACTCAACCTAGACTCCAAGGTGGGGAGGGATGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
3UTR-3UTR CAA 90 bp GCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATTTAGACTGGGCTCCCTaGATGCTTCTGTGTTCCCAA +
Preference number: 3 (lower is better)
Translates to: ASCLAWSRGHPFASAMSYLDWAP*MLLCSQ
Trigger: TTGGGAACACAGAAGCATCAAGGGAGCCCAGTCTAA...ATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CAA 90 bp AGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATTGTCTGAGAAACTCAGGATaGGGAATGGCTCCCGTAGGG +
Preference number: 3 (lower is better)
Translates to: SCLAWSRGHPFASAMSYCLRNSG*GMAPVG
Trigger: CCCTACGGGAGCCATTCCCAATCCTGAGTTTCTCAG...ACAATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR CCA 72 bp TGGATCAAGTGGGCGGCCAACCCTAGGAGTTTAGACTaGGCTCCCTTGATGCTTCTGTGTTCCCAAGAGAAT +
Preference number: 3 (lower is better)
Translates to: WIKWAANPRSLD*APLMLLCSQEN
Trigger: ATTCTCTTGGGAACACAGAAGCATCAAGGGAGCCCAGTCTAAACTCCTAGGGTTGGCCGCCCACTTGATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR CCA 72 bp GGGCTGGCTTTGGCTGCCCTGAAGAGCTTAAAGAAGTaGCATGGTATGACACAGAAAGTACCCTTCTGGGAC +
Preference number: 3 (lower is better)
Translates to: GLALAALKSLKK*HGMTQKVPFWD
Trigger: GTCCCAGAAGGGTACTTTCTGTGTCATACCATGCCACTTCTTTAAGCTCTTCAGGGCAGCCAAAGCCAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CAA 90 bp TGGGCTGTGGGCATAGGCACTCTTCACAGGGATTACATGAAACTGCATTTCCTCCCGCCAGAACCCCCATaGCCAAGTCTGAGAAACTCA +
Preference number: 3 (lower is better)
Translates to: WAVGIGTLHRDYMKLHFLPPEPP*PSLRNS
Trigger: TGAGTTTCTCAGACTTGGCAATGGGGGTTCTGGCGG...GAGGAAATGCAGTTTCATGTAATCCCTGTGAAGAGTGCCTATGCCCACAGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CAA 90 bp GGTTGGGGGAATGAAAGTCAAGGATGTCAAGGATGTCAAGTGGTGAATGGGATGAGACCAGAGCAGGATTaGTACTCCAACCCCCGCCAG +
Preference number: 3 (lower is better)
Translates to: GWGNESQGCQGCQVVNGMRPEQD*YSNPRQ
Trigger: CTGGCGGGGGTTGGAGTACAAATCCTGCTCTGGTCT...CATCCCATTCACCACTTGACATCCTTGACATCCTTGACTTTCATTCCCCCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CAA 90 bp GAACCCCCATTGCCAAGTCTGAGAAACTCAGGATTGGGAATGGCTCCCGTAGGGCTCCACTGGCTAATGTaGGTTCGTTCAAAGAGCAAA +
Preference number: 3 (lower is better)
Translates to: EPPLPSLRNSGLGMAPVGLHWLM*VRSKSK
Trigger: TTTGCTCTTTGAACGAACCAACATTAGCCAGTGGAG...CCCTACGGGAGCCATTCCCAATCCTGAGTTTCTCAGACTTGGCAATGGGGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CAA 90 bp AACTCCCTGCGGCCAGGTCTGCTCTGTCACTTGACTCCCAACAAAGAACCCTTTTTTCTGGGAATAGTTTaGGCTTCTGGCTGTGCCAAG +
Preference number: 3 (lower is better)
Translates to: NSLRPGLLCHLTPNKEPFFLGIV*ASGCAK
Trigger: CTTGGCACAGCCAGAAGCCAAAACTATTCCCAGAAA...AAAGGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGACCTGGCCGCAGGGAGTT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CAA 90 bp AGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATTGTCACAAAGCATTCCTCTaGAGCTCTCTTTGTCCTCCC +
Preference number: 3 (lower is better)
Translates to: SCLAWSRGHPFASAMSYCHKAFL*SSLCPP
Trigger: GGGAGGACAAAGAGAGCTCAAGAGGAATGCTTTGTG...ACAATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CAA 90 bp GATTTGGCTGGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACGCCCTGCCATATGTATaGCACAGGCCTCTTGCAGCC +
Preference number: 3 (lower is better)
Translates to: DLAGQPCVFLGTSSKFSDALPYV*HRPLAA
Trigger: GGCTGCAAGAGGCCTGTGCAATACATATGGCAGGGC...GTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCCAGCCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638157.1
3UTR TCA 72 bp CTCCACTGGCTAATGTTGGTTCGTTCAAAGAGCAAATaGGGCTGGCAACCCATCTTGGTGCTCACCACTCAC +
Preference number: 3 (lower is better)
Translates to: LHWLMLVRSKSK*GWQPILVLTTH
Trigger: GTGAGTGGTGAGCACCAAGATGGGTTGCCAGCCTCATTTGCTCTTTGAACGAACCAACATTAGCCAGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR TCA 72 bp GGAGCCACAAGCTATTGTTGGCAAAAATGGCTGTTTTaGCTATGCAATCTCAGCACGTGGCACCCAAGCCCC +
Preference number: 3 (lower is better)
Translates to: GATSYCWQKWLF*LCNLSTWHPSP
Trigger: GGGGCTTGGGTGCCACGTGCTGAGATTGCATAGTCAAAACAGCCATTTTTGCCAACAATAGCTTGTGGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
3UTR CCA 72 bp AGAGGTGAAGAGGATTGGGGCCAACCTGCTGGAGGTTaGGGGAATGAAAGTCAAGGATGTCAAGGATGTCAA +
Preference number: 3 (lower is better)
Translates to: RGEEDWGQPAGG*GNESQGCQGCQ
Trigger: TTGACATCCTTGACATCCTTGACTTTCATTCCCCCAACCTCCAGCAGGTTGGCCCCAATCCTCTTCACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
3UTR-3UTR CAA 90 bp AGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAAGAATATTGCACAGGCCTCTaGCAGCCACCCTGTTCCTGC +
Preference number: 3 (lower is better)
Translates to: RVFAGITLAQHFPSKSQEYCTGL*QPPCSC
Trigger: GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATA...TTCTTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR TCA 72 bp CTTACACAGAGCTTCAAGCAGCTGATCTTGCTGGCCTaGGATGTAATCCTCTTGTCCCCAAAGAGGTGGATG +
Preference number: 3 (lower is better)
Translates to: LTQSFKQLILLA*DVILLSPKRWM
Trigger: CATCCACCTCTTTGGGGACAAGAGGATTACATCTCAGGCCAGCAAGATCAGCTGCTTGAAGCTCTGTGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR GCA 72 bp CATAGATTTCACTTGGCCTTTTCCTGCCCAAACACATaGACCTTTGCCAAATCCTTCCCTCCAGTGGCTCAG +
Preference number: 3 (lower is better)
Translates to: HRFHLAFSCPNT*TFAKSFPPVAQ
Trigger: CTGAGCCACTGGAGGGAAGGATTTGGCAAAGGTGCATGTGTTTGGGCAGGAAAAGGCCAAGTGAAATCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR CCA 72 bp GGCTTTGGCTGCCCTGAAGAGCTTAAAGAAGTGGCATaGTATGACACAGAAAGTACCCTTCTGGGACCACAA +
Preference number: 3 (lower is better)
Translates to: GFGCPEELKEVA*YDTESTLLGPQ
Trigger: TTGTGGTCCCAGAAGGGTACTTTCTGTGTCATACCATGCCACTTCTTTAAGCTCTTCAGGGCAGCCAAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR CCA 72 bp CGCCAGGCAAAGTACAGTTATAGATCCAAATACAGATaGCCAGACAACTCGACTGCACTCGACCCGTGTTCT +
Preference number: 3 (lower is better)
Translates to: RQAKYSYRSKYR*PDNSTALDPCS
Trigger: AGAACACGGGTCGAGTGCAGTCGAGTTGTCTGGCCATCTGTATTTGGATCTATAACTGTACTTTGCCTGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
3UTR-3UTR CAA 90 bp GACTCTTTCATGAATCTCCACAAGCTCTGCCTGGAGCTGGTGGGACTCTTTTGGTTCGCAGGCATAACTTaGGCTCAACATTTCCCTTCT +
Preference number: 3 (lower is better)
Translates to: DSFMNLHKLCLELVGLFWFAGIT*AQHFPS
Trigger: AGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAA...CCAAAAGAGTCCCACCAGCTCCAGGCAGAGCTTGTGGAGATTCATGAAAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CAA 90 bp AGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATTGTTTCGCAGGCATAACTTaGGCTCAACATTTCCCTTCT +
Preference number: 3 (lower is better)
Translates to: SCLAWSRGHPFASAMSYCFAGIT*AQHFPS
Trigger: AGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAA...ACAATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CAA 90 bp GGTTGGGGGAATGAAAGTCAAGGATGTCAAGGATGTCAAGTGGTGAATGGGATGGGGCATAGATTTCACTaGGCCTTTTCCTGCCCAAAC +
Preference number: 3 (lower is better)
Translates to: GWGNESQGCQGCQVVNGMGHRFH*AFSCPN
Trigger: GTTTGGGCAGGAAAAGGCCAAGTGAAATCTATGCCC...CATCCCATTCACCACTTGACATCCTTGACATCCTTGACTTTCATTCCCCCAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR TCA 72 bp ATGCATGGTGCTAGTGGGCCAATGCTGAAAAGGCCCTaGATGTCTCACTCTTTGAAGCTAGTGCCTTCTACT +
Preference number: 3 (lower is better)
Translates to: MHGASGPMLKRP*MSHSLKLVPST
Trigger: AGTAGAAGGCACTAGCTTCAAAGAGTGAGACATTCAGGGCCTTTTCAGCATTGGCCCACTAGCACCATGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR TCA 72 bp AGCAAGACTGAAGACCTCTGCATGCCAAACTGGCTATaGCTCTTTCATGAATCTCCACAAGCTCTGCCTGGA +
Preference number: 3 (lower is better)
Translates to: SKTEDLCMPNWL*LFHESPQALPG
Trigger: TCCAGGCAGAGCTTGTGGAGATTCATGAAAGAGTCATAGCCAGTTTGGCATGCAGAGGTCTTCAGTCTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR TCA 72 bp CACGGAGAGAATCCACTTCTCACAAAGCATTCCTCTTaGGCTCTCTTTGTCCTCCCCATGTCATTCCAGGTT +
Preference number: 3 (lower is better)
Translates to: HGENPLLTKHSS*ALFVLPMSFQV
Trigger: AACCTGGAATGACATGGGGAGGACAAAGAGAGCTCAAGAGGAATGCTTTGTGAGAAGTGGATTCTCTCCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR GCA 72 bp GCACCTTTGCCAAATCCTTCCCTCCAGTGGCTCAGATaGTTTTTCTATGTGCAAACTGTCTCAGACAGTCGT +
Preference number: 3 (lower is better)
Translates to: APLPNPSLQWLR*FFYVQTVSDSR
Trigger: ACGACTGTCTGAGACAGTTTGCACATAGAAAAAGCATCTGAGCCACTGGAGGGAAGGATTTGGCAAAGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CAA 90 bp GGTTGGGGGAATGAAAGTCAAGGATGTCAAGGATGTCAAGTGGTGAATGGGATGCCCTATGTGCACACATaGTCTAGTGGGTTCAAATCG +
Preference number: 3 (lower is better)
Translates to: GWGNESQGCQGCQVVNGMPYVHT*SSGFKS
Trigger: CGATTTGAACCCACTAGACAATGTGTGCACATAGGG...CATCCCATTCACCACTTGACATCCTTGACATCCTTGACTTTCATTCCCCCAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CAA 90 bp AGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATTGTAGGAATCTACAAGTTTaGCATTCAAAACTTTCTGGG +
Preference number: 3 (lower is better)
Translates to: SCLAWSRGHPFASAMSYCRNLQV*HSKLSG
Trigger: CCCAGAAAGTTTTGAATGCAAAACTTGTAGATTCCT...ACAATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR-3UTR CAA 90 bp GAACCCTTTTTAAGTCATCCCAAAGGTCCCACCGTGGCACCTTTAATAATTAAATTAGACTGGGCTCCCTaGATGCTTCTGTGTTCCCAA +
Preference number: 3 (lower is better)
Translates to: EPFLSHPKGPTVAPLIIKLDWAP*MLLCSQ
Trigger: TTGGGAACACAGAAGCATCAAGGGAGCCCAGTCTAA...TTTAATTATTAAAGGTGCCACGGTGGGACCTTTGGGATGACTTAAAAAGGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR TCA 72 bp AAGCACCTTAAGCAATGCCGTCTTAAGACTTCTTTTTaGGACCTTAGGGTCTTCGCAGGCATAACTTTGGCT +
Preference number: 3 (lower is better)
Translates to: KHLKQCRLKTSF*DLRVFAGITLA
Trigger: AGCCAAAGTTATGCCTGCGAAGACCCTAAGGTCTCAAAAAGAAGTCTTAAGACGGCATTGCTTAAGGTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR TCA 72 bp GCAATGTCTTATTGTATTGAGAGAAGCAAGGAGGGCTaGAGAACGACAATGTTCTTTAAGCCTTCAGATGTT +
Preference number: 3 (lower is better)
Translates to: AMSYCIERSKEG*RTTMFFKPSDV
Trigger: AACATCTGAAGGCTTAAAGAACATTGTCGTTCTTCAGCCCTCCTTGCTTCTCTCAATACAATAAGACATTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
3UTR TCA 72 bp AAATTATTGGAACACAGAGAGCCTACAAGAGATCCATaGTTCTTAAAGGACATTCCCTATGTGCACACATTG +
Preference number: 3 (lower is better)
Translates to: KLLEHREPTRDP*FLKDIPYVHTL
Trigger: CAATGTGTGCACATAGGGAATGTCCTTTAAGAATCATGGATCTCTTGTAGGCTCTCTGTGTTCCAATAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCTCACCGCTCCGGCCGGACTaGGAGGAGCAGCTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: GGGRSGEVGAERRFLPSSPLRPD*EEQLRC
Trigger: GCAGCGCAGCTGCTCCTCCCAGTCCGGCCGGAGCGG...TGAGGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529432.5
ENST00000529750.5
CDS-3UTR TCA 90 bp GTGGGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCTCCCCCTCTCCCAGCTaGAAGCTGGGCTTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: VGGGRSGEVGAERRFLPSSPSPS*KLGLEA
Trigger: TGCCTCCAAGCCCAGCTTTCAGCTGGGAGAGGGGGA...GGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529750.5
CDS-3UTR TCA 90 bp TCTGTGGGTAGACCCTGCACCCCGGACGTGGCAAGGGCCTTCTCTCCCTCTCTCCGACGCCTGGCTCCCTaGGCACTGACTCCCGACTGT +
Preference number: 4 (lower is better)
Translates to: SVGRPCTPDVARAFSPSLRRLAP*ALTPDC
Trigger: ACAGTCGGGAGTCAGTGCTCAGGGAGCCAGGCGTCG...GAGAGAGGGAGAGAAGGCCCTTGCCACGTCCGGGGTGCAGGGTCTACCCACAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646146.1
CDS-3UTR GCA 90 bp CTCCAGTCCTGGCTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGACTGGGAGGAGCAGCTaGGCTGCACGCCCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: LQSWLQGLLRISSHKTPETGRSS*AARPAP
Trigger: CGGAGCAGGGCGTGCAGCGCAGCTGCTCCTCCCAGT...CTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAGCCAGGACTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000638157.1
CDS-3UTR CCA 90 bp GTGGGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCGCGGCAGCAGGTGCATaGCCAAGCTGCTTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: VGGGRSGEVGAERRFLPSAAAGA*PSCFRY
Trigger: GTACCTGAAGCAGCTTGGCCATGCACCTGCTGCCGC...GGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646146.1
CDS-3UTR TCA 90 bp GGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCTCAATCACCTCTTCCAGGTaGGGGACTCGCAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: GGGRSGEVGAERRFLPSSITSSR*GTRRWA
Trigger: TGCCCACCTGCGAGTCCCTCACCTGGAAGAGGTGAT...TGAGGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp CTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACAGAGCTGGTTCTGCGGGGTTaGCGAGCGAGACCGCTTCCG +
Preference number: 4 (lower is better)
Translates to: LCNLSTWHPSPRPMPQTELVLRG*RARPLP
Trigger: CGGAAGCGGTCTCGCTCGCCAACCCCGCAGAACCAG...CTCTGTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000638157.1
CDS-3UTR CCA 90 bp TTGACTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACCGCCCTGCTCCGGTGTaGACGGGGACTTGTCCGAGG +
Preference number: 4 (lower is better)
Translates to: LTMQSQHVAPKPQADAPDRPAPV*TGTCPR
Trigger: CCTCGGACAAGTCCCCGTCCACACCGGAGCAGGGCG...GTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAGTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000638157.1
CDS-3UTR CCA 90 bp TTTGGGAAGATGGTCTGGTCCATGCAGAGAGTGGTCTGGCCCTTGAGTGCAGGGGCGGCGGGGTCGTGCTaGAGCCCGGCTCCACGCACT +
Preference number: 4 (lower is better)
Translates to: FGKMVWSMQRVVWPLSAGAAGSC*SPAPRT
Trigger: AGTGCGTGGAGCCGGGCTCCAGCACGACCCCGCCGC...CCCTGCACTCAAGGGCCAGACCACTCTCTGCATGGACCAGACCATCTTCCCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS-3UTR TCA 90 bp GGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCTCAAGGGCACGTCGTGGGTaGGGACTTCGGCATCTATCA +
Preference number: 4 (lower is better)
Translates to: GGGRSGEVGAERRFLPSSRARRG*GLRHLS
Trigger: TGATAGATGCCGAAGTCCTCACCCACGACGTGCCCT...TGAGGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GTGGGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCTTGGCTCAGAGCCCATaGGCCTTGATCCCTACCAGT +
Preference number: 4 (lower is better)
Translates to: VGGGRSGEVGAERRFLPSLAQSP*ALIPTS
Trigger: ACTGGTAGGGATCAAGGCTCATGGGCTCTGAGCCAA...GGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCTCAGTGTCCTCCGGGATATaGCGCGTCTGTGTGGAACCT +
Preference number: 4 (lower is better)
Translates to: GGGRSGEVGAERRFLPSSVSSGI*RVCVEP
Trigger: AGGTTCCACACAGACGCGGCATATCCCGGAGGACAC...TGAGGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCTCAATCCACTCTAGCTCATaGCCTGGAGCCTCCTCACCC +
Preference number: 4 (lower is better)
Translates to: GGGRSGEVGAERRFLPSSIHSSS*PGASSP
Trigger: GGGTGAGGAGGCTCCAGGGCATGAGCTAGAGTGGAT...TGAGGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GTGCTCACCACTCACAGTGTTCTGTGGGTAGACCCTGCACCCCGGACGTGGCAAGGGAGGCCAGAGCCCTaGCATCTGGGGGAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: VLTTHSVLWVDPAPRTWQGRPEP*HLGEGR
Trigger: TCTCCCTTCCCCCAGATGGCAGGGCTCTGGCCTCCC...TTGCCACGTCCGGGGTGCAGGGTCTACCCACAGAACACTGTGAGTGGTGAGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GTGGGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCTGGGCAGCTGTGGACTaGCATCTGGCTTGGTCTCTA +
Preference number: 4 (lower is better)
Translates to: VGGGRSGEVGAERRFLPSWAAVD*HLAWSL
Trigger: TAGAGACCAAGCCAGATGCCAGTCCACAGCTGCCCA...GGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCTCAACTCACAGTGTTCTGTaGGTAGACCCTGCACCCCGG +
Preference number: 4 (lower is better)
Translates to: GGGRSGEVGAERRFLPSSTHSVL*VDPAPR
Trigger: CCGGGGTGCAGGGTCTACCCACAGAACACTGTGAGT...TGAGGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp CTCCAGTCCTGGCTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGTGCAATCTCAGCACGTaGCACCCAAGCCCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: LQSWLQGLLRISSHKTPECNLST*HPSPRP
Trigger: CGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCA...CTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAGCCAGGACTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GTGGGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCAACCTGCCACATGTTTaGTCCTGTGGCCCACATCCT +
Preference number: 4 (lower is better)
Translates to: VGGGRSGEVGAERRFLPSNLPHV*SCGPHP
Trigger: AGGATGTGGGCCACAGGATCAAACATGTGGCAGGTT...GGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCTCAGACCTGATGCCGTTCTaGAGGTTGATGAGCGAGTCC +
Preference number: 4 (lower is better)
Translates to: GGGRSGEVGAERRFLPSSDLMPF*RLMSES
Trigger: GGACTCGCTCATCAACCTTCAGAACGGCATCAGGTC...TGAGGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp ATCCCTACCAGTGTCCCTCACCCAAAGGCCTGGACAAGAACTGAACAAGGACCCCTGCGCTGCACGCCCTaGTCCGGTGTGGACGGGGAC +
Preference number: 4 (lower is better)
Translates to: IPTSVPHPKAWTRTEQGPLRCTP*SGVDGD
Trigger: GTCCCCGTCCACACCGGAGCAGGGCGTGCAGCGCAG...GGGTCCTTGTTCAGTTCTTGTCCAGGCCTTTGGGTGAGGGACACTGGTAGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529432.5
ENST00000529750.5
CDS-3UTR GCA 90 bp GGAGGAGAGTATCCTTCAGAACACGAGTCTCGGGAGCCTGCCACCACACAATGCGAGGAGCAGCTGCGCTaGACGCCCTGCTCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: GGEYPSEHESREPATTQCEEQLR*TPCSGV
Trigger: CACACCGGAGCAGGGCGTGCAGCGCAGCTGCTCCTC...GCATTGTGTGGTGGCAGGCTCCCGAGACTCGTGTTCTGAAGGATACTCTCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529432.5
ENST00000529750.5
CDS-3UTR GCA 90 bp TTTGGGAAGATGGTCTGGTCCATGCAGAGAGTGGTCTGGCCCTTGAGTGCAGGGGAGGAGCAGCTGCGCTaGACGCCCTGCTCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: FGKMVWSMQRVVWPLSAGEEQLR*TPCSGV
Trigger: CACACCGGAGCAGGGCGTGCAGCGCAGCTGCTCCTC...CCCTGCACTCAAGGGCCAGACCACTCTCTGCATGGACCAGACCATCTTCCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000638157.1
CDS-3UTR GCA 90 bp GCCAGCACAGGGCGCGGGAGGGCCCGCTCCTTCTCCCTGGTACATAGGCATTATAGACGGGGGCCTCACTaGTCCCTGTGGATGTTAGTG +
Preference number: 4 (lower is better)
Translates to: ASTGRGRARSFSLVHRHYRRGPH*SLWMLV
Trigger: CACTAACATCCACAGGGAGCAGTGAGGCCCCCGTCT...ATAATGCCTATGTACCAGGGAGAAGGAGCGGGCCCTCCCGCGCCCTGTGCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GCCAGCACAGGGCGCGGGAGGGCCCGCTCCTTCTCCCTGGTACATAGGCATTATACCATAAGAAAACGCTaGTCCGGCCAGCACAGGGCG +
Preference number: 4 (lower is better)
Translates to: ASTGRGRARSFSLVHRHYTIRKR*SGQHRA
Trigger: CGCCCTGTGCTGGCCGGAGCAGCGTTTTCTTATGGT...ATAATGCCTATGTACCAGGGAGAAGGAGCGGGCCCTCCCGCGCCCTGTGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCTCACAGTACTGCCCTCTCTaGCACCTTTTCCTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: GGGRSGEVGAERRFLPSSQYCPL*HLFLLG
Trigger: TCCCAGGAGGAAAAGGTGGCAGAGAGGGCAGTACTG...TGAGGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp CTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACAGAGAGCAGCTGGCTCTCCTaGTCCAGCAGAAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LCNLSTWHPSPRPMPQTESSWLS*SSRRLQ
Trigger: CTGGAGCCTTCTGCTGGAGCAGGAGAGCCAGCTGCT...CTCTGTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646146.1
CDS-3UTR CCA 90 bp AGTTTTGGCTTCTGGCTGTGCCAAGGGGGAGATTTCCAGCAGTCTGCACCATGCACCGCTTCCGGAGGATaGGCGAGCAGGCCGGCGTGC +
Preference number: 4 (lower is better)
Translates to: SFGFWLCQGGDFQQSAPCTASGG*ASRPAC
Trigger: GCACGCCGGCCTGCTCGCCCATCCTCCGGAAGCGGT...GCATGGTGCAGACTGCTGGAAATCTCCCCCTTGGCACAGCCAGAAGCCAAAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529432.5
ENST00000529750.5
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGCCGCTCCGGCCGGACTaGGAGGAGCAGCTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALPLRPD*EEQLRC
Trigger: GCAGCGCAGCTGCTCCTCCCAGTCCGGCCGGAGCGG...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR CCA 90 bp GGGAATAGTTTTGGCTTCTGGCTGTGCCAAGGGGGAGATTTCCAGCAGTCTGCACCGCTCCGGCCGGACTaGGAGGAGCAGCTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: GNSFGFWLCQGGDFQQSAPLRPD*EEQLRC
Trigger: GCAGCGCAGCTGCTCCTCCCAGTCCGGCCGGAGCGG...TGCAGACTGCTGGAAATCTCCCCCTTGGCACAGCCAGAAGCCAAAACTATTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529432.5
ENST00000529750.5
CDS-3UTR CCA 90 bp GTGGGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCCTGTGGACTGGCATCTaGCTTGGTCTCTATGCTGCT +
Preference number: 4 (lower is better)
Translates to: VGGGRSGEVGAERRFLPSLWTGI*LGLYAA
Trigger: AGCAGCATAGAGACCAAGCCAGATGCCAGTCCACAG...GGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GTGGGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCTCCATGAAATCCCGCTaGAAGGGCGAGTTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: VGGGRSGEVGAERRFLPSSMKSR*KGELVK
Trigger: CTTCACCAACTCGCCCTTCCAGCGGGATTTCATGGA...GGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GTGGGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCTGGGGTAACCTTTCTTaGAGCCTTAGACCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: VGGGRSGEVGAERRFLPSWGNLS*SLRPCQ
Trigger: CTGGCAGGGTCTAAGGCTCCAAGAAAGGTTACCCCA...GGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGCTGCGCTGCACGCCCTaGTCCGGTGTGGACGGGGAC +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALLRCTP*SGVDGD
Trigger: GTCCCCGTCCACACCGGAGCAGGGCGTGCAGCGCAG...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR GCA 90 bp AGCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTAACTGGGAGGAGCAGCTaGGCTGCACGCCCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: SQLPCLEQRPPFCFCNVLTGRSS*AARPAP
Trigger: CGGAGCAGGGCGTGCAGCGCAGCTGCTCCTCCCAGT...TAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000638157.1
CDS-3UTR GCA 90 bp GTGGGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCCAGCCACCCTGTTCCTaGCTTGTCAATGATAGCGAT +
Preference number: 4 (lower is better)
Translates to: VGGGRSGEVGAERRFLPSQPPCS*LVNDSD
Trigger: ATCGCTATCATTGACAAGGCAGGAACAGGGTGGCTG...GGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGACCGCTTCCGGAGGATaGGCGAGCAGGCCGGCGTGC +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALTASGG*ASRPAC
Trigger: GCACGCCGGCCTGCTCGCCCATCCTCCGGAAGCGGT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR CCA 90 bp CTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACAGAGGCAGGTGGAAACCGTTaGGGGTGTCCTCCGGGATAT +
Preference number: 4 (lower is better)
Translates to: LCNLSTWHPSPRPMPQTEAGGNR*GCPPGY
Trigger: ATATCCCGGAGGACACCCCCAACGGTTTCCACCTGC...CTCTGTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GGAGGAGAGTATCCTTCAGAACACGAGTCTCGGGAGCCTGCCACCACACAATGCCCTGCACCCCGGACGTaGCAAGGGCCTTCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: GGEYPSEHESREPATTQCPAPRT*QGPSLP
Trigger: AGGGAGAGAAGGCCCTTGCCACGTCCGGGGTGCAGG...GCATTGTGTGGTGGCAGGCTCCCGAGACTCGTGTTCTGAAGGATACTCTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp CTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACAGAGGGCTGCTGGATCTGCTaGGAGAGGCACTCATGTGGA +
Preference number: 4 (lower is better)
Translates to: LCNLSTWHPSPRPMPQTEGCWIC*ERHSCG
Trigger: TCCACATGAGTGCCTCTCCCAGCAGATCCAGCAGCC...CTCTGTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638157.1
3UTR CAA 72 bp CAGCTGCCAAGACTCCAGTCCTGGCTCCAGGGCCTGTaGAGGATCTCCAGTCACAAGACCCCGGAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: QLPRLQSWLQGL*RISSHKTPELL
Trigger: CAACAGCTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAGCCAGGACTGGAGTCTTGGCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp AGTTTTGGCTTCTGGCTGTGCCAAGGGGGAGATTTCCAGCAGTCTGCACCATGCAGCGCCGCTGCTCCATaGAATCCCGCTGGAAGGGCG +
Preference number: 4 (lower is better)
Translates to: SFGFWLCQGGDFQQSAPCSAAAP*NPAGRA
Trigger: CGCCCTTCCAGCGGGATTTCATGGAGCAGCGGCGCT...GCATGGTGCAGACTGCTGGAAATCTCCCCCTTGGCACAGCCAGAAGCCAAAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TTGACTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACAGGGCACGTCGTGGGTaGGGACTTCGGCATCTATCA +
Preference number: 4 (lower is better)
Translates to: LTMQSQHVAPKPQADAPDRARRG*GLRHLS
Trigger: TGATAGATGCCGAAGTCCTCACCCACGACGTGCCCT...GTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAGTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GTGCTCACCACTCACAGTGTTCTGTGGGTAGACCCTGCACCCCGGACGTGGCAAGGCCTGGACAAGAACTaGACAAGGACCCACTGGGCT +
Preference number: 4 (lower is better)
Translates to: VLTTHSVLWVDPAPRTWQGLDKN*TRTHWA
Trigger: AGCCCAGTGGGTCCTTGTTCAGTTCTTGTCCAGGCC...TTGCCACGTCCGGGGTGCAGGGTCTACCCACAGAACACTGTGAGTGGTGAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCTCAGTCTGCTCTGTCACTTaGCTCCCAACAAAGAACCCT +
Preference number: 4 (lower is better)
Translates to: GGGRSGEVGAERRFLPSSVCSVT*LPTKNP
Trigger: AGGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGAC...TGAGGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp ATGGCCAGACAACTCGACTGCACTCGACCCGTGTTCTTTCCCATAGATGGCCCAGCGAGCAGGCCGGCGTaGTGCGGTTGGAGTTACTGG +
Preference number: 4 (lower is better)
Translates to: MARQLDCTRPVFFPIDGPASRPA*CGWSYW
Trigger: CCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGC...TGGGCCATCTATGGGAAAGAACACGGGTCGAGTGCAGTCGAGTTGTCTGGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000638157.1
CDS-3UTR GCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGGAGGAGCAGCTGCGCTaGACGCCCTGCTCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALEEQLR*TPCSGV
Trigger: CACACCGGAGCAGGGCGTGCAGCGCAGCTGCTCCTC...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR GCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGACTGGGAGGAGCAGCTaGGCTGCACGCCCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALTGRSS*AARPAP
Trigger: CGGAGCAGGGCGTGCAGCGCAGCTGCTCCTCCCAGT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR GCA 90 bp GTCCTGGCTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGCTGTTAGCTTGGACACGCTCTaGAGGTGGAAACCGTTGGGG +
Preference number: 4 (lower is better)
Translates to: VLAPGPVEDLQSQDPGAVSLDTL*RWKPLG
Trigger: CCCCAACGGTTTCCACCTGCAGAGCGTGTCCAAGCT...AACAGCTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAGCCAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp TCTGTGGGTAGACCCTGCACCCCGGACGTGGCAAGGGCCTTCTCTCCCTCTCTCATCTGGGGTTTCTTCTaGCCCTGTGTCAAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: SVGRPCTPDVARAFSPSLIWGFF*PCVKKP
Trigger: GGGCTTCTTGACACAGGGGCAGAAGAAACCCCAGAT...GAGAGAGGGAGAGAAGGCCCTTGCCACGTCCGGGGTGCAGGGTCTACCCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp CTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACAGAGGGGAAGGGAGAAGAGTaGTATTTCTCCTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LCNLSTWHPSPRPMPQTEGKGEE*YFSWGQ
Trigger: CTGCCCCCAGGAGAAATAGCACTCTTCTCCCTTCCC...CTCTGTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGAATCCAGCCTGGGGCTaGAGCCGCCTGCCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALNPAWG*SRLPEL
Trigger: CAGCTCGGGCAGGCGGCTCCAGCCCCAGGCTGGATT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456860.6
ENST00000529750.5
CDS-3UTR CCA 90 bp GGAGGAGAGTATCCTTCAGAACACGAGTCTCGGGAGCCTGCCACCACACAATGCCCGGCGTGCTGCGGTTaGAGTTACTGGCAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: GGEYPSEHESREPATTQCPACCG*SYWQCR
Trigger: CCTGCACTGCCAGTAACTCCAACCGCAGCACGCCGG...GCATTGTGTGGTGGCAGGCTCCCGAGACTCGTGTTCTGAAGGATACTCTCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529750.5
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGCGCCCTGCTCCGGTGTaGACGGGGACTTGTCCGAGG +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALRPAPV*TGTCPR
Trigger: CCTCGGACAAGTCCCCGTCCACACCGGAGCAGGGCG...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR CCA 90 bp GGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACCTTGCGCACCCGCTCCGGCCGGACTaGGAGGAGCAGCTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: GQPCVFLGTSSKFSDLAHPLRPD*EEQLRC
Trigger: GCAGCGCAGCTGCTCCTCCCAGTCCGGCCGGAGCGG...GTGCGCAAGGTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000638157.1
CDS-3UTR CCA 90 bp GCCAGCACAGGGCGCGGGAGGGCCCGCTCCTTCTCCCTGGTACATAGGCATTATGAGGCGCTCCGTGTCTaGAAGCTGCTTAAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: ASTGRGRARSFSLVHRHYEALRV*KLLKEL
Trigger: AAGCTCTTTAAGCAGCTTCCAGACACGGAGCGCCTC...ATAATGCCTATGTACCAGGGAGAAGGAGCGGGCCCTCCCGCGCCCTGTGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp CACTCGACCCGTGTTCTTTCCCATAGATGGCCCAGTGCAGGTGTTGGGGCTGCTGACACGCTCTGCAGGTaGAAACCGTTGGGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: HSTRVLSHRWPSAGVGAADTLCR*KPLGVS
Trigger: GGACACCCCCAACGGTTTCCACCTGCAGAGCGTGTC...AGCAGCCCCAACACCTGCACTGGGCCATCTATGGGAAAGAACACGGGTCGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp TCTGTGGGTAGACCCTGCACCCCGGACGTGGCAAGGGCCTTCTCTCCCTCTCTCGACATCTGGGACATCTaGGGTTTCTTCTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: SVGRPCTPDVARAFSPSLDIWDI*GFFCPC
Trigger: ACAGGGGCAGAAGAAACCCCAGATGTCCCAGATGTC...GAGAGAGGGAGAGAAGGCCCTTGCCACGTCCGGGGTGCAGGGTCTACCCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GTGGGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCACAGAGCTTAGTCAATaGAAAAGTCAGGACCCAGGC +
Preference number: 4 (lower is better)
Translates to: VGGGRSGEVGAERRFLPSTELSQ*KSQDPG
Trigger: GCCTGGGTCCTGACTTTTCCATTGACTAAGCTCTGT...GGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp CTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACAGAGAGAGGTGAAGAGGATTaGGGCCAACCTGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: LCNLSTWHPSPRPMPQTERGEED*GQPAGG
Trigger: ACCTCCAGCAGGTTGGCCCCAATCCTCTTCACCTCT...CTCTGTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp CTCCAGTCCTGGCTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGAGAGGTGAAGAGGATTaGGGCCAACCTGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: LQSWLQGLLRISSHKTPERGEED*GQPAGG
Trigger: ACCTCCAGCAGGTTGGCCCCAATCCTCTTCACCTCT...CTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAGCCAGGACTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GCCAGCACAGGGCGCGGGAGGGCCCGCTCCTTCTCCCTGGTACATAGGCATTATTTCTCTGCTTGTAGGTaGGGCTTAACACGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: ASTGRGRARSFSLVHRHYFSACR*GLTRLG
Trigger: TCCCAGCCGTGTTAAGCCCCACCTACAAGCAGAGAA...ATAATGCCTATGTACCAGGGAGAAGGAGCGGGCCCTCCCGCGCCCTGTGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646146.1
CDS-3UTR TCA 90 bp CTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACAGAGGTCATTGAAGTCCAGTaGAGGGGAGTTCACAGGAGC +
Preference number: 4 (lower is better)
Translates to: LCNLSTWHPSPRPMPQTEVIEVQ*RGVHRS
Trigger: GCTCCTGTGAACTCCCCTTCACTGGACTTCAATGAC...CTCTGTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGAGCGCCGCTGCTCCATaGAATCCCGCTGGAAGGGCG +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALSAAAP*NPAGRA
Trigger: CGCCCTTCCAGCGGGATTTCATGGAGCAGCGGCGCT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GGAGGAGAGTATCCTTCAGAACACGAGTCTCGGGAGCCTGCCACCACACAATGCATCACCTCTTCCAGGTaGGGGACTCGCAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: GGEYPSEHESREPATTQCITSSR*GTRRWA
Trigger: TGCCCACCTGCGAGTCCCTCACCTGGAAGAGGTGAT...GCATTGTGTGGTGGCAGGCTCCCGAGACTCGTGTTCTGAAGGATACTCTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp CTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACAGAGAACCTGCCACATGTTTaGTCCTGTGGCCCACATCCT +
Preference number: 4 (lower is better)
Translates to: LCNLSTWHPSPRPMPQTENLPHV*SCGPHP
Trigger: AGGATGTGGGCCACAGGATCAAACATGTGGCAGGTT...CTCTGTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCTCAGGTCTCTGGCTAATATaGGCACAGTCAACAAGGGTA +
Preference number: 4 (lower is better)
Translates to: GGGRSGEVGAERRFLPSSGLWLI*AQSTRV
Trigger: TACCCTTGTTGACTGTGCTCATATTAGCCAGAGACC...TGAGGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS-3UTR TCA 90 bp TATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCAGGGGAGGTCGGTGCTaGGAGGCGGTTCCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: YGLCTCIAQASCSHPVPARGGRC*EAVPAL
Trigger: GAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCT...GGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCTCAGCTATGACTCTTTCATaGATCTCCACAAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GGGRSGEVGAERRFLPSSAMTLS*ISTSSA
Trigger: GGCAGAGCTTGTGGAGATTCATGAAAGAGTCATAGC...TGAGGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp CACTCGACCCGTGTTCTTTCCCATAGATGGCCCAGTGCAGGTGTTGGGGCTGCTGGCTCCAGGGCCTGTTaGGGATCTCCAGTCACAAGA +
Preference number: 4 (lower is better)
Translates to: HSTRVLSHRWPSAGVGAAGSRAC*GSPVTR
Trigger: TCTTGTGACTGGAGATCCTCAACAGGCCCTGGAGCC...AGCAGCCCCAACACCTGCACTGGGCCATCTATGGGAAAGAACACGGGTCGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GTCCTGGCTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGCTGTTGAGTGGTCTGGCCCTTaGGTGCAGGGTAGGAAAATG +
Preference number: 4 (lower is better)
Translates to: VLAPGPVEDLQSQDPGAVEWSGP*VQGRKM
Trigger: CATTTTCCTACCCTGCACTCAAGGGCCAGACCACTC...AACAGCTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAGCCAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGGCGAGCAGGCCGGCGTaGTGCGGTTGGAGTTACTGG +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALASRPA*CGWSYW
Trigger: CCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGC...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR GCA 90 bp ATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTACTGGGAGGAGCAGCTaGGCTGCACGCCCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: MVYVHVLHRPLAATLFLPTGRSS*AARPAP
Trigger: CGGAGCAGGGCGTGCAGCGCAGCTGCTCCTCCCAGT...AGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR GCA 90 bp GTGGGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCTCCGTGTCTGGAAGCTaGTTAAAGAGCTTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: VGGGRSGEVGAERRFLPSSVSGS*LKSFLK
Trigger: CTTCAGAAAGCTCTTTAAGCAGCTTCCAGACACGGA...GGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp TCTGTGGGTAGACCCTGCACCCCGGACGTGGCAAGGGCCTTCTCTCCCTCTCTCCTGGCTTGGTCTCTATaGTGCTCTTGGATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: SVGRPCTPDVARAFSPSLLAWSL*CSWMSC
Trigger: ACAGCTCATCCAAGAGCAGCATAGAGACCAAGCCAG...GAGAGAGGGAGAGAAGGCCCTTGCCACGTCCGGGGTGCAGGGTCTACCCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GCCAGCACAGGGCGCGGGAGGGCCCGCTCCTTCTCCCTGGTACATAGGCATTATCGTCTGTGTGGAACCTaGCACATGTTTGATCCTGTG +
Preference number: 4 (lower is better)
Translates to: ASTGRGRARSFSLVHRHYRLCGT*HMFDPV
Trigger: CACAGGATCAAACATGTGGCAGGTTCCACACAGACG...ATAATGCCTATGTACCAGGGAGAAGGAGCGGGCCCTCCCGCGCCCTGTGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp CTCCAGTCCTGGCTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGCAGGCAGTGAGGGTCTaGGTGGTGTATTCCAACATC +
Preference number: 4 (lower is better)
Translates to: LQSWLQGLLRISSHKTPEQAVRV*VVYSNI
Trigger: GATGTTGGAATACACCACGCAGACCCTCACTGCCTG...CTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAGCCAGGACTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp CTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACAGAGATCTGGGGTTTCTTCTaGCCCTGTGTCAAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: LCNLSTWHPSPRPMPQTEIWGFF*PCVKKP
Trigger: GGGCTTCTTGACACAGGGGCAGAAGAAACCCCAGAT...CTCTGTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp CTCCAGTCCTGGCTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGCAGCAGTCTGCACCATaGCTCCTTCTTTGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: LQSWLQGLLRISSHKTPEQQSAP*LLLWLR
Trigger: TCTGAGCCAAAGAAGGAGGCATGGTGCAGACTGCTG...CTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAGCCAGGACTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp AGTTTTGGCTTCTGGCTGTGCCAAGGGGGAGATTTCCAGCAGTCTGCACCATGCTGCAGGTGTTGGGGCTaGTCCCTCTGCCTCACCCCA +
Preference number: 4 (lower is better)
Translates to: SFGFWLCQGGDFQQSAPCCRCWG*SLCLTP
Trigger: TGGGGTGAGGCAGAGGGAGCAGCCCCAACACCTGCA...GCATGGTGCAGACTGCTGGAAATCTCCCCCTTGGCACAGCCAGAAGCCAAAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp ATGGCCAGACAACTCGACTGCACTCGACCCGTGTTCTTTCCCATAGATGGCCCACCACGGCACACCAGCTaGTGGCTACTGCTCACCACG +
Preference number: 4 (lower is better)
Translates to: MARQLDCTRPVFFPIDGPPRHTS*WLLLTT
Trigger: CGTGGTGAGCAGTAGCCAGCAGCTGGTGTGCCGTGG...TGGGCCATCTATGGGAAAGAACACGGGTCGAGTGCAGTCGAGTTGTCTGGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS-3UTR GCA 90 bp CTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGCTGTTGCACAGAGGGAGGCCAGAGCCCTaGCATATGTATTGCACAGGC +
Preference number: 4 (lower is better)
Translates to: LQGLLRISSHKTPELLHRGRPEP*HMYCTG
Trigger: GCCTGTGCAATACATATGGCAGGGCTCTGGCCTCCC...TCTGTGCAACAGCTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS-3UTR GCA 90 bp CTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGCTGTTGCACAGATTCAGCGGCAGCAGGTaGATGGCCAAGCTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: LQGLLRISSHKTPELLHRFSGSR*MAKLLQ
Trigger: CTGAAGCAGCTTGGCCATGCACCTGCTGCCGCTGAA...TCTGTGCAACAGCTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646146.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGCGCCTGCCCGAGCTGTaGCTGCCGCTGCCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALRLPEL*LPLPVS
Trigger: AGAAACTGGCAGCGGCAGCCACAGCTCGGGCAGGCG...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456860.6
ENST00000529750.5
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTCTGCAAATCCAGCCTaGGGCTGGAGCCGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALSANPA*GWSRLP
Trigger: GGGCAGGCGGCTCCAGCCCCAGGCTGGATTTGCAGA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456860.6
ENST00000529750.5
CDS-3UTR CCA 90 bp TTGAGTTGGGGAAAAAGCACCATGGGTTTGGGAAGATGGTCTGGTCCATGCAGAACCGCTTCCGGAGGATaGGCGAGCAGGCCGGCGTGC +
Preference number: 4 (lower is better)
Translates to: LSWGKSTMGLGRWSGPCRTASGG*ASRPAC
Trigger: GCACGCCGGCCTGCTCGCCCATCCTCCGGAAGCGGT...TCTGCATGGACCAGACCATCTTCCCAAACCCATGGTGCTTTTTCCCCAACTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000638157.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGCTGGTTCTGCGGGGTTaGCGAGCGAGACCGCTTCCG +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALLVLRG*RARPLP
Trigger: CGGAAGCGGTCTCGCTCGCCAACCCCGCAGAACCAG...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR CCA 90 bp CTCCAGTCCTGGCTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGGAGGCGCTCCGTGTCTaGAAGCTGCTTAAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: LQSWLQGLLRISSHKTPEEALRV*KLLKEL
Trigger: AAGCTCTTTAAGCAGCTTCCAGACACGGAGCGCCTC...CTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAGCCAGGACTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp CTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACAGAGCCTCACTGCTCCCTGTaGATGTTAGTGTGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: LCNLSTWHPSPRPMPQTEPHCSL*MLVCCW
Trigger: CCAACAGCACACTAACATCCACAGGGAGCAGTGAGG...CTCTGTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp CTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACAGAGTCCATGAAATCCCGCTaGAAGGGCGAGTTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: LCNLSTWHPSPRPMPQTESMKSR*KGELVK
Trigger: CTTCACCAACTCGCCCTTCCAGCGGGATTTCATGGA...CTCTGTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCTCAAAGTGCTCTCCGTTTTaGCCAGCTCGCTCTCTAAAT +
Preference number: 4 (lower is better)
Translates to: GGGRSGEVGAERRFLPSSKCSPF*PARSLN
Trigger: ATTTAGAGAGCGAGCTGGCCAAAACGGAGAGCACTT...TGAGGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCTCAACATGTTTGATCCTGTaGCCCACATCCTCATCTGTG +
Preference number: 4 (lower is better)
Translates to: GGGRSGEVGAERRFLPSSTCLIL*PTSSSV
Trigger: CACAGATGAGGATGTGGGCCACAGGATCAAACATGT...TGAGGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp CTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACAGAGTGGGGTAACCTTTCTTaGAGCCTTAGACCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LCNLSTWHPSPRPMPQTEWGNLS*SLRPCQ
Trigger: CTGGCAGGGTCTAAGGCTCCAAGAAAGGTTACCCCA...CTCTGTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GCCAGCACAGGGCGCGGGAGGGCCCGCTCCTTCTCCCTGGTACATAGGCATTATCCCGCTCCTTCTCCCTaGTACATAGGCATTATCTCT +
Preference number: 4 (lower is better)
Translates to: ASTGRGRARSFSLVHRHYPAPSP*YIGIIS
Trigger: AGAGATAATGCCTATGTACCAGGGAGAAGGAGCGGG...ATAATGCCTATGTACCAGGGAGAAGGAGCGGGCCCTCCCGCGCCCTGTGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TCTGTGGGTAGACCCTGCACCCCGGACGTGGCAAGGGCCTTCTCTCCCTCTCTCCCCGCTCCTTCTCCCTaGTACATAGGCATTATCTCT +
Preference number: 4 (lower is better)
Translates to: SVGRPCTPDVARAFSPSLPAPSP*YIGIIS
Trigger: AGAGATAATGCCTATGTACCAGGGAGAAGGAGCGGG...GAGAGAGGGAGAGAAGGCCCTTGCCACGTCCGGGGTGCAGGGTCTACCCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp ATCCCTACCAGTGTCCCTCACCCAAAGGCCTGGACAAGAACTGAACAAGGACCCCCGGCGTGCTGCGGTTaGAGTTACTGGCAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: IPTSVPHPKAWTRTEQGPPACCG*SYWQCS
Trigger: GGAGCACTGCCAGTAACTCCAACCGCAGCACGCCGG...GGGTCCTTGTTCAGTTCTTGTCCAGGCCTTTGGGTGAGGGACACTGGTAGGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529432.5
CDS-3UTR CCA 90 bp GCCAGCACAGGGCGCGGGAGGGCCCGCTCCTTCTCCCTGGTACATAGGCATTATTCTGCCTGGAGCTGGTaGGACTCTTTTGGTCATTAC +
Preference number: 4 (lower is better)
Translates to: ASTGRGRARSFSLVHRHYSAWSW*DSFGHY
Trigger: GTAATGACCAAAAGAGTCCCACCAGCTCCAGGCAGA...ATAATGCCTATGTACCAGGGAGAAGGAGCGGGCCCTCCCGCGCCCTGTGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TCTGTGGGTAGACCCTGCACCCCGGACGTGGCAAGGGCCTTCTCTCCCTCTCTCTCTGCCTGGAGCTGGTaGGACTCTTTTGGTCATTAC +
Preference number: 4 (lower is better)
Translates to: SVGRPCTPDVARAFSPSLSAWSW*DSFGHY
Trigger: GTAATGACCAAAAGAGTCCCACCAGCTCCAGGCAGA...GAGAGAGGGAGAGAAGGCCCTTGCCACGTCCGGGGTGCAGGGTCTACCCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp CTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGCTGTTGCACAGATCACCCTGGGTCTCCTaGGAATGCAGACACTGCCCT +
Preference number: 4 (lower is better)
Translates to: LQGLLRISSHKTPELLHRSPWVS*ECRHCP
Trigger: AGGGCAGTGTCTGCATTCCCAGGAGACCCAGGGTGA...TCTGTGCAACAGCTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GGAGGAGAGTATCCTTCAGAACACGAGTCTCGGGAGCCTGCCACCACACAATGCCAGAGCCCTGCCATCTaGGGGAAGGGAGAAGAGTGC +
Preference number: 4 (lower is better)
Translates to: GGEYPSEHESREPATTQCQSPAI*GKGEEC
Trigger: GCACTCTTCTCCCTTCCCCCAGATGGCAGGGCTCTG...GCATTGTGTGGTGGCAGGCTCCCGAGACTCGTGTTCTGAAGGATACTCTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GTGGGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCAGATCCAAATACAGATaGCCAGACAACTCGACTGCA +
Preference number: 4 (lower is better)
Translates to: VGGGRSGEVGAERRFLPSRSKYR*PDNSTA
Trigger: TGCAGTCGAGTTGTCTGGCCATCTGTATTTGGATCT...GGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTCCCCCTCTCCCAGCTaGAAGCTGGGCTTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALSPSPS*KLGLEA
Trigger: TGCCTCCAAGCCCAGCTTTCAGCTGGGAGAGGGGGA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000456860.6
ENST00000529750.5
CDS-3UTR TCA 90 bp CACTCGACCCGTGTTCTTTCCCATAGATGGCCCAGTGCAGGTGTTGGGGCTGCTTGGTCTGTGTCTCCCTaGCAGTGGCAGTTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: HSTRVLSHRWPSAGVGAAWSVSP*QWQFWE
Trigger: CTCCCAAAACTGCCACTGTCAGGGAGACACAGACCA...AGCAGCCCCAACACCTGCACTGGGCCATCTATGGGAAAGAACACGGGTCGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCTCAAGAAGTTCTTCTCGATaGACGTTTTCACTAACCCCC +
Preference number: 4 (lower is better)
Translates to: GGGRSGEVGAERRFLPSSRSSSR*TFSLTP
Trigger: GGGGGTTAGTGAAAACGTTCATCGAGAAGAACTTCT...TGAGGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GCAAATGAGGCTGGCAACCCATCTTGGTGCTCACCACTCACAGTGTTCTGTGGGGACCCTGCCAGGCAGTaGGGGTCTGCGTGGTGTATT +
Preference number: 4 (lower is better)
Translates to: ANEAGNPSWCSPLTVFCGDPARQ*GSAWCI
Trigger: AATACACCACGCAGACCCTCACTGCCTGGCAGGGTC...CCCACAGAACACTGTGAGTGGTGAGCACCAAGATGGGTTGCCAGCCTCATTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp ATCCCTACCAGTGTCCCTCACCCAAAGGCCTGGACAAGAACTGAACAAGGACCCGACCCTGCCAGGCAGTaGGGGTCTGCGTGGTGTATT +
Preference number: 4 (lower is better)
Translates to: IPTSVPHPKAWTRTEQGPDPARQ*GSAWCI
Trigger: AATACACCACGCAGACCCTCACTGCCTGGCAGGGTC...GGGTCCTTGTTCAGTTCTTGTCCAGGCCTTTGGGTGAGGGACACTGGTAGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GTGCTCACCACTCACAGTGTTCTGTGGGTAGACCCTGCACCCCGGACGTGGCAAACTGACAGCTCTAAGTaGAGGCCTCAGAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: VLTTHSVLWVDPAPRTWQTDSSK*RPQSHR
Trigger: TCTGTGGCTCTGAGGCCTTCACTTAGAGCTGTCAGT...TTGCCACGTCCGGGGTGCAGGGTCTACCCACAGAACACTGTGAGTGGTGAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GTGGGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCGAAGATGAGCTCCATTaGAAAGAATGTTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: VGGGRSGEVGAERRFLPSEDELH*KECSSP
Trigger: GGGAGAAGAACATTCTTTTCAATGGAGCTCATCTTC...GGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp CTCCAGTCCTGGCTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGACAAAGCATTCCTCTTaGGCTCTCTTTGTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LQSWLQGLLRISSHKTPETKHSS*ALFVLP
Trigger: GGGGAGGACAAAGAGAGCTCAAGAGGAATGCTTTGT...CTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAGCCAGGACTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp CTCCAGTCCTGGCTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGAAGAAAACACAGAGGTaGAGAGGATTGGGGCCAACC +
Preference number: 4 (lower is better)
Translates to: LQSWLQGLLRISSHKTPEKKTQR*RGLGPT
Trigger: GGTTGGCCCCAATCCTCTTCACCTCTGTGTTTTCTT...CTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAGCCAGGACTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp TTTGGGAAGATGGTCTGGTCCATGCAGAGAGTGGTCTGGCCCTTGAGTGCAGGGTGGCCAGAGCAGAAGTaGGGTAACAAGGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: FGKMVWSMQRVVWPLSAGWPEQK*GNKAGQ
Trigger: CTGCCCAGCCTTGTTACCTCACTTCTGCTCTGGCCA...CCCTGCACTCAAGGGCCAGACCACTCTCTGCATGGACCAGACCATCTTCCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp ATGAGGTGTAGGGAGGCCAGAGCCCTGCCATATGTATTGCACAGGCCTCTTGCATCGTGGCTGCTCTGCTaGCTGCTCTGTTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: MRCREARALPYVLHRPLASWLLC*LLCWLL
Trigger: CAGCAGCCAACAGAGCAGTCAGCAGAGCAGCCACGA...TGCAAGAGGCCTGTGCAATACATATGGCAGGGCTCTGGCCTCCCTACACCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS-3UTR TCA 90 bp GGGAATAGTTTTGGCTTCTGGCTGTGCCAAGGGGGAGATTTCCAGCAGTCTGCATGGCTCCCTGAGCACTaGCTCCCGACTGTCCCCACA +
Preference number: 4 (lower is better)
Translates to: GNSFGFWLCQGGDFQQSAWLPEH*LPTVPT
Trigger: TGTGGGGACAGTCGGGAGTCAGTGCTCAGGGAGCCA...TGCAGACTGCTGGAAATCTCCCCCTTGGCACAGCCAGAAGCCAAAACTATTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646146.1
CDS-3UTR GCA 90 bp CTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGCTGTTGCACAGAAGCTGTGGCTGCCGCTaGCAGTTTCTGATGAGGATG +
Preference number: 4 (lower is better)
Translates to: LQGLLRISSHKTPELLHRSCGCR*QFLMRM
Trigger: CATCCTCATCAGAAACTGGCAGCGGCAGCCACAGCT...TCTGTGCAACAGCTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529750.5
CDS-3UTR GCA 90 bp GAACCCCCATTGCCAAGTCTGAGAAACTCAGGATTGGGAATGGCTCCCGTAGGGTGCCCGAGCTGTGGCTaGCGCTGCCAGTTTCTGATG +
Preference number: 4 (lower is better)
Translates to: EPPLPSLRNSGLGMAPVGCPSCG*RCQFLM
Trigger: CATCAGAAACTGGCAGCGGCAGCCACAGCTCGGGCA...CCCTACGGGAGCCATTCCCAATCCTGAGTTTCTCAGACTTGGCAATGGGGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529750.5
CDS-3UTR GCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGAGCAGGCCGGCGTGCTaGGGTTGGAGTTACTGGCAG +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALSRPAC*GWSYWQ
Trigger: CTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR GCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTCTCCGTCCTGGTTCTaGGGGGTTGGCGAGCGAGAC +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALSPSWF*GVGERD
Trigger: GTCTCGCTCGCCAACCCCGCAGAACCAGGACGGAGA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR GCA 90 bp ACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCCCTGCGCTGCACGCCCTaGTCCGGTGTGGACGGGGAC +
Preference number: 4 (lower is better)
Translates to: TTMFFKPSDVGEIVSISSLRCTP*SGVDGD
Trigger: GTCCCCGTCCACACCGGAGCAGGGCGTGCAGCGCAG...GGAGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000638157.1
CDS-3UTR GCA 90 bp ATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCGAGGAGCAGCTGCGCTaGACGCCCTGCTCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: IWSMYMYCTGLLQPPCSCEEQLR*TPCSGV
Trigger: CACACCGGAGCAGGGCGTGCAGCGCAGCTGCTCCTC...GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR GCA 90 bp GGAGGAGAGTATCCTTCAGAACACGAGTCTCGGGAGCCTGCCACCACACAATGCTCAGAGAAGCGCCGCTaGTCCATGAAATCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: GGEYPSEHESREPATTQCSEKRR*SMKSRW
Trigger: CCAGCGGGATTTCATGGAGCAGCGGCGCTTCTCTGA...GCATTGTGTGGTGGCAGGCTCCCGAGACTCGTGTTCTGAAGGATACTCTCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp CTCCAGTCCTGGCTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGCGTCTGTGTGGAACCTaGCACATGTTTGATCCTGTG +
Preference number: 4 (lower is better)
Translates to: LQSWLQGLLRISSHKTPERLCGT*HMFDPV
Trigger: CACAGGATCAAACATGTGGCAGGTTCCACACAGACG...CTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAGCCAGGACTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp GGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCTCACCATATACAGAAGATTaGCAGCCAGGGAATTTCACC +
Preference number: 4 (lower is better)
Translates to: GGGRSGEVGAERRFLPSSPYTED*QPGNFT
Trigger: GGTGAAATTCCCTGGCTGGCAATCTTCTGTATATGG...TGAGGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS-3UTR GCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTCTGTGGGTAGACCCTaGACCCCGGACGTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALSVGRP*TPDVAR
Trigger: CCTTGCCACGTCCGGGGTGCAGGGTCTACCCACAGA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GTGGGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCCTCCAGTGGCTCAGATaGTTTTTCTATGTGCAAACT +
Preference number: 4 (lower is better)
Translates to: VGGGRSGEVGAERRFLPSLQWLR*FFYVQT
Trigger: AGTTTGCACATAGAAAAAGCATCTGAGCCACTGGAG...GGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GCCAGCACAGGGCGCGGGAGGGCCCGCTCCTTCTCCCTGGTACATAGGCATTATAGATTTCCAGCAGTCTaGACCATGCCTCCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: ASTGRGRARSFSLVHRHYRFPAV*TMPPSL
Trigger: CAAAGAAGGAGGCATGGTGCAGACTGCTGGAAATCT...ATAATGCCTATGTACCAGGGAGAAGGAGCGGGCCCTCCCGCGCCCTGTGCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp CTCCAGTCCTGGCTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGAGACCCCGGAGCTGTTaGACAGAACATCAAAACAGG +
Preference number: 4 (lower is better)
Translates to: LQSWLQGLLRISSHKTPERPRSC*TEHQNR
Trigger: CCTGTTTTGATGTTCTGTGCAACAGCTCCGGGGTCT...CTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAGCCAGGACTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp GCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATTCCTGGCCGGCAAGGTaGTGCTCATCAGCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: ASCLAWSRGHPFASAMSYSWPAR*CSSAAK
Trigger: CTTGGCAGCTGATGAGCAGCACCTTGCCGGCCAGGA...ATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp AACTCCCTGCGGCCAGGTCTGCTCTGTCACTTGACTCCCAACAAAGAACCCTTTCCAGACAGAGCCAGCTaGCTTGCCTGGAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: NSLRPGLLCHLTPNKEPFPDRAS*LAWSRG
Trigger: GCCTCTGCTCCAGGCAAGGCAGCTGGCTCTGTCTGG...AAAGGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGACCTGGCCGCAGGGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp AGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATTGTCAAGCCCCAGGCCGATaGCCCAGACAGAGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SCLAWSRGHPFASAMSYCQAPGR*PRQSQL
Trigger: CAGCTGGCTCTGTCTGGGGCATCGGCCTGGGGCTTG...ACAATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp TGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTATTGCCCAGCACGGCTaGCCCTCCCAACGACGCCTG +
Preference number: 4 (lower is better)
Translates to: WSMYMYCTGLLQPPCSCLIAQHG*PSQRRL
Trigger: CAGGCGTCGTTGGGAGGGGCAGCCGTGCTGGGCAAT...AAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646146.1
CDS-3UTR GCA 90 bp TTGACTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACATTTCCTCAGATCCGTaGCAGCAACGGTGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: LTMQSQHVAPKPQADAPDISSDP*QQRCSA
Trigger: CGCTGAACACCGTTGCTGGCACGGATCTGAGGAAAT...GTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAGTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646146.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGCCGGCGTGCTGCGGTTaGAGTTACTGGCAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALPACCG*SYWQCR
Trigger: CCTGCACTGCCAGTAACTCCAACCGCAGCACGCCGG...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456860.6
ENST00000529750.5
CDS-3UTR CCA 90 bp GGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACCTTGCGCACCGCCCTGCTCCGGTGTaGACGGGGACTTGTCCGAGG +
Preference number: 4 (lower is better)
Translates to: GQPCVFLGTSSKFSDLAHRPAPV*TGTCPR
Trigger: CCTCGGACAAGTCCCCGTCCACACCGGAGCAGGGCG...GTGCGCAAGGTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000638157.1
CDS-3UTR CCA 90 bp TTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCCCGCTCCGGCCGGACTaGGAGGAGCAGCTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: FIWSMYMYCTGLLQPPCSPLRPD*EEQLRC
Trigger: GCAGCGCAGCTGCTCCTCCCAGTCCGGCCGGAGCGG...GGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR CCA 90 bp GCCAGCACAGGGCGCGGGAGGGCCCGCTCCTTCTCCCTGGTACATAGGCATTATAAGTGCTCTCCGTTTTaGCCAGCTCGCTCTCTAAAT +
Preference number: 4 (lower is better)
Translates to: ASTGRGRARSFSLVHRHYKCSPF*PARSLN
Trigger: ATTTAGAGAGCGAGCTGGCCAAAACGGAGAGCACTT...ATAATGCCTATGTACCAGGGAGAAGGAGCGGGCCCTCCCGCGCCCTGTGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATGACACGCTCTGCAGGTaGAAACCGTTGGGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: ASCLAWSRGHPFASAMSYDTLCR*KPLGVS
Trigger: GGACACCCCCAACGGTTTCCACCTGCAGAGCGTGTC...ATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp TTGACTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACTGGGGTAACCTTTCTTaGAGCCTTAGACCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LTMQSQHVAPKPQADAPDWGNLS*SLRPCQ
Trigger: CTGGCAGGGTCTAAGGCTCCAAGAAAGGTTACCCCA...GTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAGTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp CTCCAGTCCTGGCTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGTCGTGGTACTTTTGTTaGGACTCTAAGAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LQSWLQGLLRISSHKTPESWYFC*DSKSWA
Trigger: GGCCCAGCTCTTAGAGTCCCAACAAAAGTACCACGA...CTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAGCCAGGACTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp CTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACAGAGCCTAGGAGTTTAGACTaGGCTCCCTTGATGCTTCTG +
Preference number: 4 (lower is better)
Translates to: LCNLSTWHPSPRPMPQTEPRSLD*APLMLL
Trigger: CAGAAGCATCAAGGGAGCCCAGTCTAAACTCCTAGG...CTCTGTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp CACTCGACCCGTGTTCTTTCCCATAGATGGCCCAGTGCAGGTGTTGGGGCTGCTCCATGCCTCCTTCTTTaGCTCAGAGCCCATGAGCCT +
Preference number: 4 (lower is better)
Translates to: HSTRVLSHRWPSAGVGAAPCLLL*LRAHEP
Trigger: AGGCTCATGGGCTCTGAGCCAAAGAAGGAGGCATGG...AGCAGCCCCAACACCTGCACTGGGCCATCTATGGGAAAGAACACGGGTCGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp ATCCCTACCAGTGTCCCTCACCCAAAGGCCTGGACAAGAACTGAACAAGGACCCAAACAGGGAGCTGGCTaGGCCCTTCACAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: IPTSVPHPKAWTRTEQGPKQGAG*ALHSHG
Trigger: GCCATGGCTGTGAAGGGCCCAGCCAGCTCCCTGTTT...GGGTCCTTGTTCAGTTCTTGTCCAGGCCTTTGGGTGAGGGACACTGGTAGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp AGCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTAAAACAGGGAGCTGGCTaGGCCCTTCACAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: SQLPCLEQRPPFCFCNVLKQGAG*ALHSHG
Trigger: GCCATGGCTGTGAAGGGCCCAGCCAGCTCCCTGTTT...TAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp ATGGCCAGACAACTCGACTGCACTCGACCCGTGTTCTTTCCCATAGATGGCCCAAGCATCAGCTCCTCCTaGCCGGCAAGGTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: MARQLDCTRPVFFPIDGPSISSS*PARCCS
Trigger: TGAGCAGCACCTTGCCGGCCAGGAGGAGCTGATGCT...TGGGCCATCTATGGGAAAGAACACGGGTCGAGTGCAGTCGAGTTGTCTGGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GCCAGCACAGGGCGCGGGAGGGCCCGCTCCTTCTCCCTGGTACATAGGCATTATCAGGGTAGGAAAATGTaGGGAGCCACAAGCTATTGT +
Preference number: 4 (lower is better)
Translates to: ASTGRGRARSFSLVHRHYQGRKM*GATSYC
Trigger: ACAATAGCTTGTGGCTCCCCACATTTTCCTACCCTG...ATAATGCCTATGTACCAGGGAGAAGGAGCGGGCCCTCCCGCGCCCTGTGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp CTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGCTGTTGCACAGAAGTATCCCATTGTGTTaGAGTCGTCGTCAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: LQGLLRISSHKTPELLHRSIPLC*SRRQGA
Trigger: TGCCCCCTGACGACGACTTCAACACAATGGGATACT...TCTGTGCAACAGCTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp CTCCAGTCCTGGCTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGTTAGTGTGCTGTTGGTaGTGGATTTCTTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LQSWLQGLLRISSHKTPELVCCW*WISWAA
Trigger: AGCTGCCCAAGAAATCCATCACCAACAGCACACTAA...CTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAGCCAGGACTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GTCCTGGCTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGCTGTTCAATCTTCTCCCCCATaGTGTTGTCAATGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: VLAPGPVEDLQSQDPGAVQSSPP*CCQWRA
Trigger: AGCTCGCCATTGACAACATCATGGGGGAGAAGATTG...AACAGCTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAGCCAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp TTGAGTTGGGGAAAAAGCACCATGGGTTTGGGAAGATGGTCTGGTCCATGCAGAAGCGCCGCTGCTCCATaGAATCCCGCTGGAAGGGCG +
Preference number: 4 (lower is better)
Translates to: LSWGKSTMGLGRWSGPCRSAAAP*NPAGRA
Trigger: CGCCCTTCCAGCGGGATTTCATGGAGCAGCGGCGCT...TCTGCATGGACCAGACCATCTTCCCAAACCCATGGTGCTTTTTCCCCAACTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp ATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCAGCGCCGCTGCTCCATaGAATCCCGCTGGAAGGGCG +
Preference number: 4 (lower is better)
Translates to: IWSMYMYCTGLLQPPCSCSAAAP*NPAGRA
Trigger: CGCCCTTCCAGCGGGATTTCATGGAGCAGCGGCGCT...GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGGCTCTGTGGAGACCCTaGGTCGGCTCTTGTTCCGAG +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALALWRP*VGSCSE
Trigger: CTCGGAACAAGAGCCGACTCAGGGTCTCCACAGAGC...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGATCACCTCTTCCAGGTaGGGGACTCGCAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALITSSR*GTRRWA
Trigger: TGCCCACCTGCGAGTCCCTCACCTGGAAGAGGTGAT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGCATCTGTGGGCGTGGTaGCCGGGCTCATCACCTCTT +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALHLWAW*PGSSPL
Trigger: AAGAGGTGATGAGCCCGGTCACCACGCCCACAGATG...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGGACCCTGCCAGGCAGTaGGGGTCTGCGTGGTGTATT +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALDPARQ*GSAWCI
Trigger: AATACACCACGCAGACCCTCACTGCCTGGCAGGGTC...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp TTGACTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACCGTTCAAAGAGCAAATaGGGCTGGCAACCCATCTTG +
Preference number: 4 (lower is better)
Translates to: LTMQSQHVAPKPQADAPDRSKSK*GWQPIL
Trigger: CAAGATGGGTTGCCAGCCTCATTTGCTCTTTGAACG...GTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATGGCCTGGACAAGAACTaGACAAGGACCCACTGGGCT +
Preference number: 4 (lower is better)
Translates to: ASCLAWSRGHPFASAMSYGLDKN*TRTHWA
Trigger: AGCCCAGTGGGTCCTTGTTCAGTTCTTGTCCAGGCC...ATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATAGAGCCCATGAGCCTTaGTCCCTACCAGTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: ASCLAWSRGHPFASAMSYRAHEP*SLPVSL
Trigger: GAGGGACACTGGTAGGGATCAAGGCTCATGGGCTCT...ATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp CTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGCTGTTGCACAGATCCTGGGAATGGTCCTaGGAGGTAAAGCAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LQGLLRISSHKTPELLHRSWEWS*EVKQKQ
Trigger: CTGCTTCTGCTTTACCTCTCAGGACCATTCCCAGGA...TCTGTGCAACAGCTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp ATGGCCAGACAACTCGACTGCACTCGACCCGTGTTCTTTCCCATAGATGGCCCATGGCCAGAGCAGAAGTaGGGTAACAAGGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: MARQLDCTRPVFFPIDGPWPEQK*GNKAGQ
Trigger: CTGCCCAGCCTTGTTACCTCACTTCTGCTCTGGCCA...TGGGCCATCTATGGGAAAGAACACGGGTCGAGTGCAGTCGAGTTGTCTGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATGGCTCCAGGGCCTGTTaGGGATCTCCAGTCACAAGA +
Preference number: 4 (lower is better)
Translates to: ASCLAWSRGHPFASAMSYGSRAC*GSPVTR
Trigger: TCTTGTGACTGGAGATCCTCAACAGGCCCTGGAGCC...ATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTGCCCGAGCTGTGGCTaGCGCTGCCAGTTTCTGATG +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALCPSCG*RCQFLM
Trigger: CATCAGAAACTGGCAGCGGCAGCCACAGCTCGGGCA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456860.6
ENST00000529750.5
CDS-3UTR GCA 90 bp TTTCTGCTCTGCACTATGACAGCAAGCAGGGGCCTTAAAAGATGGCCTTCCAGGAGCAGGCCGGCGTGCTaGGGTTGGAGTTACTGGCAG +
Preference number: 4 (lower is better)
Translates to: FLLCTMTASRGLKRWPSRSRPAC*GWSYWQ
Trigger: CTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCT...CCTGGAAGGCCATCTTTTAAGGCCCCTGCTTGCTGTCATAGTGCAGAGCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000638157.1
CDS-3UTR GCA 90 bp TTCTATGTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTAATGTTGGTTCGTCTGCGCTGCACGCCCTaGTCCGGTGTGGACGGGGAC +
Preference number: 4 (lower is better)
Translates to: FYVQTVSDSRLHWLMLVRLRCTP*SGVDGD
Trigger: GTCCCCGTCCACACCGGAGCAGGGCGTGCAGCGCAG...ACGAACCAACATTAGCCAGTGGAGACGACTGTCTGAGACAGTTTGCACATAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529432.5
ENST00000529750.5
CDS-3UTR GCA 90 bp GTGCTCACCACTCACAGTGTTCTGTGGGTAGACCCTGCACCCCGGACGTGGCAACTGGCTTGGTCTCTATaGTGCTCTTGGATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: VLTTHSVLWVDPAPRTWQLAWSL*CSWMSC
Trigger: ACAGCTCATCCAAGAGCAGCATAGAGACCAAGCCAG...TTGCCACGTCCGGGGTGCAGGGTCTACCCACAGAACACTGTGAGTGGTGAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp CTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACAGAGTCTCAGCCAAATAAGTaGTCTCCGTTTTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LCNLSTWHPSPRPMPQTESQPNK*SPFWPA
Trigger: AGCTGGCCAAAACGGAGAGCACTTATTTGGCTGAGA...CTCTGTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp AGCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTAGTGTCCTCCGGGATATaGCGCGTCTGTGTGGAACCT +
Preference number: 4 (lower is better)
Translates to: SQLPCLEQRPPFCFCNVLVSSGI*RVCVEP
Trigger: AGGTTCCACACAGACGCGGCATATCCCGGAGGACAC...TAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp ATCCCTACCAGTGTCCCTCACCCAAAGGCCTGGACAAGAACTGAACAAGGACCCAGCTTGGACACGCTCTaGAGGTGGAAACCGTTGGGG +
Preference number: 4 (lower is better)
Translates to: IPTSVPHPKAWTRTEQGPSLDTL*RWKPLG
Trigger: CCCCAACGGTTTCCACCTGCAGAGCGTGTCCAAGCT...GGGTCCTTGTTCAGTTCTTGTCCAGGCCTTTGGGTGAGGGACACTGGTAGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTGGAGCCTTAGACCCTaGCAGGCAGTGAGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALWSLRP*QAVRVC
Trigger: GCAGACCCTCACTGCCTGGCAGGGTCTAAGGCTCCA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp ATGGCCAGACAACTCGACTGCACTCGACCCGTGTTCTTTCCCATAGATGGCCCAACCATAAGAAAACGCTaGTCCGGCCAGCACAGGGCG +
Preference number: 4 (lower is better)
Translates to: MARQLDCTRPVFFPIDGPTIRKR*SGQHRA
Trigger: CGCCCTGTGCTGGCCGGAGCAGCGTTTTCTTATGGT...TGGGCCATCTATGGGAAAGAACACGGGTCGAGTGCAGTCGAGTTGTCTGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GGAGGAGAGTATCCTTCAGAACACGAGTCTCGGGAGCCTGCCACCACACAATGCCCTGCCCTCCTCAGCTaGTCCACCATAAGAAAACGC +
Preference number: 4 (lower is better)
Translates to: GGEYPSEHESREPATTQCPALLS*STIRKR
Trigger: GCGTTTTCTTATGGTGGAGCAGCTGAGGAGGGCAGG...GCATTGTGTGGTGGCAGGCTCCCGAGACTCGTGTTCTGAAGGATACTCTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GACTCTTTCATGAATCTCCACAAGCTCTGCCTGGAGCTGGTGGGACTCTTTTGGCTGAGAGGCGGTTCCTaGCCTCCTCAGCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: DSFMNLHKLCLELVGLFWLRGGS*PPQLLH
Trigger: GTGGAGCAGCTGAGGAGGGCAGGAACCGCCTCTCAG...CCAAAAGAGTCCCACCAGCTCCAGGCAGAGCTTGTGGAGATTCATGAAAGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGGAGACTTGGAATTCTTaGCGCCGCTCCGGCCGGACT +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALETWNS*RRSGRT
Trigger: AGTCCGGCCGGAGCGGCGGCAAGAATTCCAAGTCTC...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456860.6
CDS-3UTR GCA 90 bp TTTCTGCTCTGCACTATGACAGCAAGCAGGGGCCTTAAAAGATGGCCTTCCAGGCCAGACAGAGCCAGCTaGCTTGCCTGGAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: FLLCTMTASRGLKRWPSRPDRAS*LAWSRG
Trigger: GCCTCTGCTCCAGGCAAGGCAGCTGGCTCTGTCTGG...CCTGGAAGGCCATCTTTTAAGGCCCCTGCTTGCTGTCATAGTGCAGAGCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp CACTCGACCCGTGTTCTTTCCCATAGATGGCCCAGTGCAGGTGTTGGGGCTGCTGCCAGACAACTCGACTaGACTCGACCCGTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: HSTRVLSHRWPSAGVGAAARQLD*TRPVFF
Trigger: AAAGAACACGGGTCGAGTGCAGTCGAGTTGTCTGGC...AGCAGCCCCAACACCTGCACTGGGCCATCTATGGGAAAGAACACGGGTCGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp AGTTTTGGCTTCTGGCTGTGCCAAGGGGGAGATTTCCAGCAGTCTGCACCATGCGGTGCATGGCCAAGCTaGTTCAGGTACCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: SFGFWLCQGGDFQQSAPCGAWPS*FRYHCS
Trigger: GCTGCAGTGGTACCTGAAGCAGCTTGGCCATGCACC...GCATGGTGCAGACTGCTGGAAATCTCCCCCTTGGCACAGCCAGAAGCCAAAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646146.1
CDS-3UTR CCA 90 bp TTGAGTTGGGGAAAAAGCACCATGGGTTTGGGAAGATGGTCTGGTCCATGCAGACGCCTGCCCGAGCTGTaGCTGCCGCTGCCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: LSWGKSTMGLGRWSGPCRRLPEL*LPLPVS
Trigger: AGAAACTGGCAGCGGCAGCCACAGCTCGGGCAGGCG...TCTGCATGGACCAGACCATCTTCCCAAACCCATGGTGCTTTTTCCCCAACTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529750.5
CDS-3UTR CCA 90 bp TTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCACCGCTTCCGGAGGATaGGCGAGCAGGCCGGCGTGC +
Preference number: 4 (lower is better)
Translates to: FIWSMYMYCTGLLQPPCSTASGG*ASRPAC
Trigger: GCACGCCGGCCTGCTCGCCCATCCTCCGGAAGCGGT...GGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGATGGTGTCTCCGTCCTaGTTCTGCGGGGTTGGCGAG +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALMVSPS*FCGVGE
Trigger: CTCGCCAACCCCGCAGAACCAGGACGGAGACACCAT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR CCA 90 bp TATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCGCCCTGCTCCGGTGTaGACGGGGACTTGTCCGAGG +
Preference number: 4 (lower is better)
Translates to: YMVYVHVLHRPLAATLFLRPAPV*TGTCPR
Trigger: CCTCGGACAAGTCCCCGTCCACACCGGAGCAGGGCG...CAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR CCA 90 bp CACTCGACCCGTGTTCTTTCCCATAGATGGCCCAGTGCAGGTGTTGGGGCTGCTTCCATGAAATCCCGCTaGAAGGGCGAGTTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: HSTRVLSHRWPSAGVGAASMKSR*KGELVK
Trigger: CTTCACCAACTCGCCCTTCCAGCGGGATTTCATGGA...AGCAGCCCCAACACCTGCACTGGGCCATCTATGGGAAAGAACACGGGTCGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp AGCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTAGCAGGTGGAAACCGTTaGGGGTGTCCTCCGGGATAT +
Preference number: 4 (lower is better)
Translates to: SQLPCLEQRPPFCFCNVLAGGNR*GCPPGY
Trigger: ATATCCCGGAGGACACCCCCAACGGTTTCCACCTGC...TAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATGCAGGTGGAAACCGTTaGGGGTGTCCTCCGGGATAT +
Preference number: 4 (lower is better)
Translates to: ASCLAWSRGHPFASAMSYAGGNR*GCPPGY
Trigger: ATATCCCGGAGGACACCCCCAACGGTTTCCACCTGC...ATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGGACACGCTCTGCAGGTaGAAACCGTTGGGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALDTLCR*KPLGVS
Trigger: GGACACCCCCAACGGTTTCCACCTGCAGAGCGTGTC...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp AACTCCCTGCGGCCAGGTCTGCTCTGTCACTTGACTCCCAACAAAGAACCCTTTGACACGCTCTGCAGGTaGAAACCGTTGGGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: NSLRPGLLCHLTPNKEPFDTLCR*KPLGVS
Trigger: GGACACCCCCAACGGTTTCCACCTGCAGAGCGTGTC...AAAGGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGACCTGGCCGCAGGGAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TTTGGGAAGATGGTCTGGTCCATGCAGAGAGTGGTCTGGCCCTTGAGTGCAGGGATTCCCAGCCCTTACTaGGTCCACACCCTACACAGG +
Preference number: 4 (lower is better)
Translates to: FGKMVWSMQRVVWPLSAGIPSPY*VHTLHR
Trigger: CCTGTGTAGGGTGTGGACCCAGTAAGGGCTGGGAAT...CCCTGCACTCAAGGGCCAGACCACTCTCTGCATGGACCAGACCATCTTCCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GCCAGCACAGGGCGCGGGAGGGCCCGCTCCTTCTCCCTGGTACATAGGCATTATGAAAACGCTCCACCCTaGCTAATAAACAATGTGCTC +
Preference number: 4 (lower is better)
Translates to: ASTGRGRARSFSLVHRHYENAPP*LINNVL
Trigger: GAGCACATTGTTTATTAGCCAGGGTGGAGCGTTTTC...ATAATGCCTATGTACCAGGGAGAAGGAGCGGGCCCTCCCGCGCCCTGTGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp AGCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTACCGGCGTGCTGCGGTTaGAGTTACTGGCAGTGCTTT +
Preference number: 4 (lower is better)
Translates to: SQLPCLEQRPPFCFCNVLPACCG*SYWQCF
Trigger: AAAGCACTGCCAGTAACTCCAACCGCAGCACGCCGG...TAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS-3UTR CCA 90 bp TATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGGGCTCAGGGGAGGGCTaGCCACATGGCAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: YMVYVHVLHRPLAATLFLGSGEG*PHGSWD
Trigger: GTCCCAGCTGCCATGTGGCCAGCCCTCCCCTGAGCC...CAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS-3UTR CCA 90 bp GTACTAGCAGTAAGTTTTCTGACCTTGCGCACAGCGCCAGGCAAAGTACAGTTACTCCCCCGCTCTCCGTaGGCTCGGAGCTCCCACTGT +
Preference number: 4 (lower is better)
Translates to: VLAVSFLTLRTAPGKVQLLPRSP*ARSSHC
Trigger: ACAGTGGGAGCTCCGAGCCCACGGAGAGCGGGGGAG...TAACTGTACTTTGCCTGGCGCTGTGCGCAAGGTCAGAAAACTTACTGCTAGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS-3UTR CCA 90 bp ATGGCCAGACAACTCGACTGCACTCGACCCGTGTTCTTTCCCATAGATGGCCCACCAGCCAGTCTCCCATaGCGGGCTCTGCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: MARQLDCTRPVFFPIDGPPASLP*RALLSS
Trigger: AGAAGAAAGCAGAGCCCGCCATGGGAGACTGGCTGG...TGGGCCATCTATGGGAAAGAACACGGGTCGAGTGCAGTCGAGTTGTCTGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646146.1
CDS-3UTR TCA 90 bp GTGCTCACCACTCACAGTGTTCTGTGGGTAGACCCTGCACCCCGGACGTGGCAATTAGTGTGCTGTTGGTaGTGGATTTCTTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: VLTTHSVLWVDPAPRTWQLVCCW*WISWAA
Trigger: AGCTGCCCAAGAAATCCATCACCAACAGCACACTAA...TTGCCACGTCCGGGGTGCAGGGTCTACCCACAGAACACTGTGAGTGGTGAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GTACTAGCAGTAAGTTTTCTGACCTTGCGCACAGCGCCAGGCAAAGTACAGTTAAGCGCCGCTGCTCCATaGAATCCCGCTGGAAGGGCG +
Preference number: 4 (lower is better)
Translates to: VLAVSFLTLRTAPGKVQLSAAAP*NPAGRA
Trigger: CGCCCTTCCAGCGGGATTTCATGGAGCAGCGGCGCT...TAACTGTACTTTGCCTGGCGCTGTGCGCAAGGTCAGAAAACTTACTGCTAGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGAGGGCACGTCGTGGGTaGGGACTTCGGCATCTATCA +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALRARRG*GLRHLS
Trigger: TGATAGATGCCGAAGTCCTCACCCACGACGTGCCCT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp TTTCTGCTCTGCACTATGACAGCAAGCAGGGGCCTTAAAAGATGGCCTTCCAGGGCTCTGTGGAGACCCTaGGTCGGCTCTTGTTCCGAG +
Preference number: 4 (lower is better)
Translates to: FLLCTMTASRGLKRWPSRALWRP*VGSCSE
Trigger: CTCGGAACAAGAGCCGACTCAGGGTCTCCACAGAGC...CCTGGAAGGCCATCTTTTAAGGCCCCTGCTTGCTGTCATAGTGCAGAGCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp TATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCATCACCTCTTCCAGGTaGGGGACTCGCAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: YGLCTCIAQASCSHPVPAITSSR*GTRRWA
Trigger: TGCCCACCTGCGAGTCCCTCACCTGGAAGAGGTGAT...GGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp ATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTCATCTGTGGGCGTGGTaGCCGGGCTCATCACCTCTT +
Preference number: 4 (lower is better)
Translates to: MVYVHVLHRPLAATLFLPHLWAW*PGSSPL
Trigger: AAGAGGTGATGAGCCCGGTCACCACGCCCACAGATG...AGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp TTTCTGCTCTGCACTATGACAGCAAGCAGGGGCCTTAAAAGATGGCCTTCCAGGGACCCTGCCAGGCAGTaGGGGTCTGCGTGGTGTATT +
Preference number: 4 (lower is better)
Translates to: FLLCTMTASRGLKRWPSRDPARQ*GSAWCI
Trigger: AATACACCACGCAGACCCTCACTGCCTGGCAGGGTC...CCTGGAAGGCCATCTTTTAAGGCCCCTGCTTGCTGTCATAGTGCAGAGCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GACCTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCAGGGGAGGTCGGTGCTaGGAGGCGGTTCCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: DLRVFAGITLAQHFPSKSRGGRC*EAVPAL
Trigger: GAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCT...GCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp AGTTTTGGCTTCTGGCTGTGCCAAGGGGGAGATTTCCAGCAGTCTGCACCATGCGCCCAGAGGGCCCCGTaGATTCAGATAAATGCATGG +
Preference number: 4 (lower is better)
Translates to: SFGFWLCQGGDFQQSAPCAQRAP*IQINAW
Trigger: CCATGCATTTATCTGAATTCACGGGGCCCTCTGGGC...GCATGGTGCAGACTGCTGGAAATCTCCCCCTTGGCACAGCCAGAAGCCAAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GACTTGCCCAAGGCCACAGAGCTTAGTCAATGGAAAAGTCAGGACCCAGGCTCAGGCCTGGACAAGAACTaGACAAGGACCCACTGGGCT +
Preference number: 4 (lower is better)
Translates to: DLPKATELSQWKSQDPGSGLDKN*TRTHWA
Trigger: AGCCCAGTGGGTCCTTGTTCAGTTCTTGTCCAGGCC...TGAGCCTGGGTCCTGACTTTTCCATTGACTAAGCTCTGTGGCCTTGGGCAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GCCAGCACAGGGCGCGGGAGGGCCCGCTCCTTCTCCCTGGTACATAGGCATTATCCTACAAGAGATCCATaGTTCTTAAAGGACATTCCC +
Preference number: 4 (lower is better)
Translates to: ASTGRGRARSFSLVHRHYPTRDP*FLKDIP
Trigger: GGGAATGTCCTTTAAGAATCATGGATCTCTTGTAGG...ATAATGCCTATGTACCAGGGAGAAGGAGCGGGCCCTCCCGCGCCCTGTGCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp ATCCCTACCAGTGTCCCTCACCCAAAGGCCTGGACAAGAACTGAACAAGGACCCGTGACAGGAGGATACTaGAGCTCAGAGAGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: IPTSVPHPKAWTRTEQGPVTGGY*SSERGS
Trigger: ACTCCCCCTCTCTGAGCTTCAGTATCCTCCTGTCAC...GGGTCCTTGTTCAGTTCTTGTCCAGGCCTTTGGGTGAGGGACACTGGTAGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp AAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTTCCTTCCTAGGCCTCTGCGCTCCCCCTaGGCCCTCCGCCAGCGGCCT +
Preference number: 4 (lower is better)
Translates to: KVSKPCCLYHLFHFFLPRPLRSP*ALRQRP
Trigger: AGGCCGCTGGCGGAGGGCTCAGGGGGAGCGCAGAGG...CCTAGGAAGGAAGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR TCA 90 bp AGTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCCCTCTGCGCTCCCCCTaGGCCCTCCGCCAGCGGCCT +
Preference number: 4 (lower is better)
Translates to: SEHWKVSKPCCLYHLFHFPLRSP*ALRQRP
Trigger: AGGCCGCTGGCGGAGGGCTCAGGGGGAGCGCAGAGG...GAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR TCA 90 bp TTGAGTTGGGGAAAAAGCACCATGGGTTTGGGAAGATGGTCTGGTCCATGCAGACCCCGACTCCGTCAGTaGTTCCATTGCCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: LSWGKSTMGLGRWSGPCRPRLRQ*FHCPAR
Trigger: CCGTGCTGGGCAATGGAATCACTGACGGAGTCGGGG...TCTGCATGGACCAGACCATCTTCCCAAACCCATGGTGCTTTTTCCCCAACTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646146.1
CDS-3UTR GCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGAGCCAGAAGAACTGCTaGCACTGCCCCTTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALSQKNC*HCPFFP
Trigger: GGGGAAGAAGGGGCAGTGGCAGCAGTTCTTCTGGCT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456860.6
ENST00000529750.5
CDS-3UTR GCA 90 bp TTCTATGTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTAATGTTGGTTCGTACTGGGAGGAGCAGCTaGGCTGCACGCCCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: FYVQTVSDSRLHWLMLVRTGRSS*AARPAP
Trigger: CGGAGCAGGGCGTGCAGCGCAGCTGCTCCTCCCAGT...ACGAACCAACATTAGCCAGTGGAGACGACTGTCTGAGACAGTTTGCACATAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529432.5
ENST00000529750.5
CDS-3UTR GCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGAGACGGGGGCCTCACTaGTCCCTGTGGATGTTAGTG +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALRRGPH*SLWMLV
Trigger: CACTAACATCCACAGGGAGCAGTGAGGCCCCCGTCT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTCAGAGAAGCGCCGCTaGTCCATGAAATCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALSEKRR*SMKSRW
Trigger: CCAGCGGGATTTCATGGAGCAGCGGCGCTTCTCTGA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGGTGTCCTCCGGGATATaGCGCGTCTGTGTGGAACCT +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALVSSGI*RVCVEP
Trigger: AGGTTCCACACAGACGCGGCATATCCCGGAGGACAC...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGAGCTTGGACACGCTCTaGAGGTGGAAACCGTTGGGG +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALSLDTL*RWKPLG
Trigger: CCCCAACGGTTTCCACCTGCAGAGCGTGTCCAAGCT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp TATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTGGAGCCTTAGACCCTaGCAGGCAGTGAGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: YGLCTCIAQASCSHPVPAWSLRP*QAVRVC
Trigger: GCAGACCCTCACTGCCTGGCAGGGTCTAAGGCTCCA...GGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp GCCAGCACAGGGCGCGGGAGGGCCCGCTCCTTCTCCCTGGTACATAGGCATTATTCTGAATTTTCCAGCTaGTACAGGAGGATGCAAATG +
Preference number: 4 (lower is better)
Translates to: ASTGRGRARSFSLVHRHYSEFSS*YRRMQM
Trigger: CATTTGCATCCTCCTGTAGCAGCTGGAAAATTCAGA...ATAATGCCTATGTACCAGGGAGAAGGAGCGGGCCCTCCCGCGCCCTGTGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS-3UTR GCA 90 bp GGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACCTTGCGCACCTGAGAGGCGGTTCCTaGCCTCCTCAGCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: GQPCVFLGTSSKFSDLAHLRGGS*PPQLLH
Trigger: GTGGAGCAGCTGAGGAGGGCAGGAACCGCCTCTCAG...GTGCGCAAGGTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGAACAAGCCCTGGAGTTaGCGTCAACAGCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALNKPWS*RQQPGW
Trigger: CCAGCCTGGCTGTTGACGGCAACTCCAGGGCTTGTT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456860.6
CDS-3UTR GCA 90 bp AGTTTTGGCTTCTGGCTGTGCCAAGGGGGAGATTTCCAGCAGTCTGCACCATGCCCCACCTCCCTCTGCTaGTGTTATTTGGTGTGGTCG +
Preference number: 4 (lower is better)
Translates to: SFGFWLCQGGDFQQSAPCPTSLC*CYLVWS
Trigger: CGACCACACCAAATAACAGCAGCAGAGGGAGGTGGG...GCATGGTGCAGACTGCTGGAAATCTCCCCCTTGGCACAGCCAGAAGCCAAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529432.5
CDS-3UTR GCA 90 bp GGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCTCAGATGCTTTTTCTATGTaGAAACTGTCTCAGACAGTC +
Preference number: 4 (lower is better)
Translates to: GGGRSGEVGAERRFLPSSDAFSM*KLSQTV
Trigger: GACTGTCTGAGACAGTTTGCACATAGAAAAAGCATC...TGAGGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp ATGGCCAGACAACTCGACTGCACTCGACCCGTGTTCTTTCCCATAGATGGCCCAAATCTCCACAAGCTCTaGCTGGAGCTGGTGGGACTC +
Preference number: 4 (lower is better)
Translates to: MARQLDCTRPVFFPIDGPNLHKL*LELVGL
Trigger: GAGTCCCACCAGCTCCAGGCAGAGCTTGTGGAGATT...TGGGCCATCTATGGGAAAGAACACGGGTCGAGTGCAGTCGAGTTGTCTGGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GTGCTCACCACTCACAGTGTTCTGTGGGTAGACCCTGCACCCCGGACGTGGCAAGGCCTTCCAGGAAAATaGTCCTCTCAGACCCAAAAT +
Preference number: 4 (lower is better)
Translates to: VLTTHSVLWVDPAPRTWQGLPGK*SSQTQN
Trigger: ATTTTGGGTCTGAGAGGAGCATTTTCCTGGAAGGCC...TTGCCACGTCCGGGGTGCAGGGTCTACCCACAGAACACTGTGAGTGGTGAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp TTGACTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACTGCAAGTTTCTGCTCTaGACTATGACAGCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: LTMQSQHVAPKPQADAPDCKFLL*TMTASR
Trigger: CCTGCTTGCTGTCATAGTGCAGAGCAGAAACTTGCA...GTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp GCATCTTCTAGAAGAAAACACAGAGGTGAAGAGGATTGGGGCCAACCTGCTGGATGCAGGTGTTGGGGCTaGTCCCTCTGCCTCACCCCA +
Preference number: 4 (lower is better)
Translates to: ASSRRKHRGEEDWGQPAGCRCWG*SLCLTP
Trigger: TGGGGTGAGGCAGAGGGAGCAGCCCCAACACCTGCA...TCCAGCAGGTTGGCCCCAATCCTCTTCACCTCTGTGTTTTCTTCTAGAAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp GCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATTGGAGTTACTGGCAGTaGTTTCTTCCCGCGCTCGAG +
Preference number: 4 (lower is better)
Translates to: ASCLAWSRGHPFASAMSYWSYWQ*FLPALE
Trigger: CTCGAGCGCGGGAAGAAAGCACTGCCAGTAACTCCA...ATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS-3UTR GCA 90 bp ACAGTTATAGATCCAAATACAGATGGCCAGACAACTCGACTGCACTCGACCCGTCCAGCTGCTGGCTACTaGTCACCACGTCTCCCCGCG +
Preference number: 4 (lower is better)
Translates to: TVIDPNTDGQTTRLHSTRPAAGY*SPRLPA
Trigger: CGCGGGGAGACGTGGTGAGCAGTAGCCAGCAGCTGG...ACGGGTCGAGTGCAGTCGAGTTGTCTGGCCATCTGTATTTGGATCTATAACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS-3UTR CCA 90 bp GTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTAATGTTGGTTCGTTCAAAGCTGGTTCTGCGGGGTTaGCGAGCGAGACCGCTTCCG +
Preference number: 4 (lower is better)
Translates to: VQTVSDSRLHWLMLVRSKLVLRG*RARPLP
Trigger: CGGAAGCGGTCTCGCTCGCCAACCCCGCAGAACCAG...CTTTGAACGAACCAACATTAGCCAGTGGAGACGACTGTCTGAGACAGTTTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529432.5
ENST00000529750.5
CDS-3UTR CCA 90 bp ACACATGCACCTTTGCCAAATCCTTCCCTCCAGTGGCTCAGATGCTTTTTCTATCGCCCTGCTCCGGTGTaGACGGGGACTTGTCCGAGG +
Preference number: 4 (lower is better)
Translates to: THAPLPNPSLQWLRCFFYRPAPV*TGTCPR
Trigger: CCTCGGACAAGTCCCCGTCCACACCGGAGCAGGGCG...ATAGAAAAAGCATCTGAGCCACTGGAGGGAAGGATTTGGCAAAGGTGCATGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529432.5
ENST00000529750.5
CDS-3UTR CCA 90 bp CACTCGACCCGTGTTCTTTCCCATAGATGGCCCAGTGCAGGTGTTGGGGCTGCTAGTGCCAGAGCTCCTTaGGACACAGAGGCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: HSTRVLSHRWPSAGVGAASARAP*DTEAFQ
Trigger: TTGAAAAGCCTCTGTGTCCCAAGGAGCTCTGGCACT...AGCAGCCCCAACACCTGCACTGGGCCATCTATGGGAAAGAACACGGGTCGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp ATGAGGTGTAGGGAGGCCAGAGCCCTGCCATATGTATTGCACAGGCCTCTTGCATGGGCAGCTGTGGACTaGCATCTGGCTTGGTCTCTA +
Preference number: 4 (lower is better)
Translates to: MRCREARALPYVLHRPLAWAAVD*HLAWSL
Trigger: TAGAGACCAAGCCAGATGCCAGTCCACAGCTGCCCA...TGCAAGAGGCCTGTGCAATACATATGGCAGGGCTCTGGCCTCCCTACACCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGGCAGGTGGAAACCGTTaGGGGTGTCCTCCGGGATAT +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALAGGNR*GCPPGY
Trigger: ATATCCCGGAGGACACCCCCAACGGTTTCCACCTGC...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp TGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGACACGCTCTGCAGGTaGAAACCGTTGGGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: WSMYMYCTGLLQPPCSCLDTLCR*KPLGVS
Trigger: GGACACCCCCAACGGTTTCCACCTGCAGAGCGTGTC...AAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGGCGCGAAACAAGCCCTaGAGTTGCCGTCAACAGCCA +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALARNKP*SCRQQP
Trigger: TGGCTGTTGACGGCAACTCCAGGGCTTGTTTCGCGC...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456860.6
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGGGCGCTTGTGAGACTTaGAATTCTTGCCGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALGACET*NSCRRS
Trigger: GGAGCGGCGGCAAGAATTCCAAGTCTCACAAGCGCC...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456860.6
CDS-3UTR CCA 90 bp AGCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTAACACTCAGTACGGTCTaGATCAAGTGGGCGGCCAAC +
Preference number: 4 (lower is better)
Translates to: SQLPCLEQRPPFCFCNVLTLSTV*IKWAAN
Trigger: GTTGGCCGCCCACTTGATCCAGACCGTACTGAGTGT...TAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTCCCTCTCTCAAATCCTaGAGGGCCCAGCACACCCTG +
Preference number: 4 (lower is better)
Translates to: WSMYMYCTGLLQPPCSCLPSLKS*RAQHTL
Trigger: CAGGGTGTGCTGGGCCCTCCAGGATTTGAGAGAGGG...AAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp AACTCCCTGCGGCCAGGTCTGCTCTGTCACTTGACTCCCAACAAAGAACCCTTTACTCACAGTGTTCTGTaGGTAGACCCTGCACCCCGG +
Preference number: 4 (lower is better)
Translates to: NSLRPGLLCHLTPNKEPFTHSVL*VDPAPR
Trigger: CCGGGGTGCAGGGTCTACCCACAGAACACTGTGAGT...AAAGGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGACCTGGCCGCAGGGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp ATCCCTACCAGTGTCCCTCACCCAAAGGCCTGGACAAGAACTGAACAAGGACCCGATCTTACACCTCTGTaGGGCCAGAGACCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: IPTSVPHPKAWTRTEQGPDLTPL*GQRPEQ
Trigger: CTGCTCTGGTCTCTGGCCCCACAGAGGTGTAAGATC...GGGTCCTTGTTCAGTTCTTGTCCAGGCCTTTGGGTGAGGGACACTGGTAGGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GAACCCCCATTGCCAAGTCTGAGAAACTCAGGATTGGGAATGGCTCCCGTAGGGGATCTTACACCTCTGTaGGGCCAGAGACCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: EPPLPSLRNSGLGMAPVGDLTPL*GQRPEQ
Trigger: CTGCTCTGGTCTCTGGCCCCACAGAGGTGTAAGATC...CCCTACGGGAGCCATTCCCAATCCTGAGTTTCTCAGACTTGGCAATGGGGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp AACTCCCTGCGGCCAGGTCTGCTCTGTCACTTGACTCCCAACAAAGAACCCTTTTCACCCTGGGTCTCCTaGGAATGCAGACACTGCCCT +
Preference number: 4 (lower is better)
Translates to: NSLRPGLLCHLTPNKEPFSPWVS*ECRHCP
Trigger: AGGGCAGTGTCTGCATTCCCAGGAGACCCAGGGTGA...AAAGGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGACCTGGCCGCAGGGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTCAGAGCCCTGCCATCTaGGGGAAGGGAGAAGAGTGC +
Preference number: 4 (lower is better)
Translates to: WSMYMYCTGLLQPPCSCLQSPAI*GKGEEC
Trigger: GCACTCTTCTCCCTTCCCCCAGATGGCAGGGCTCTG...AAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GAACCCCCATTGCCAAGTCTGAGAAACTCAGGATTGGGAATGGCTCCCGTAGGGAGAGGTGAAGAGGATTaGGGCCAACCTGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: EPPLPSLRNSGLGMAPVGRGEED*GQPAGG
Trigger: ACCTCCAGCAGGTTGGCCCCAATCCTCTTCACCTCT...CCCTACGGGAGCCATTCCCAATCCTGAGTTTCTCAGACTTGGCAATGGGGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATATCAAAACAGGGAGCTaGCTGGGCCCTTCACAGCCA +
Preference number: 4 (lower is better)
Translates to: ASCLAWSRGHPFASAMSYIKTGS*LGPSQP
Trigger: TGGCTGTGAAGGGCCCAGCCAGCTCCCTGTTTTGAT...ATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp AGCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTAATCAAAACAGGGAGCTaGCTGGGCCCTTCACAGCCA +
Preference number: 4 (lower is better)
Translates to: SQLPCLEQRPPFCFCNVLIKTGS*LGPSQP
Trigger: TGGCTGTGAAGGGCCCAGCCAGCTCCCTGTTTTGAT...TAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp ATCCCTACCAGTGTCCCTCACCCAAAGGCCTGGACAAGAACTGAACAAGGACCCATCAAAACAGGGAGCTaGCTGGGCCCTTCACAGCCA +
Preference number: 4 (lower is better)
Translates to: IPTSVPHPKAWTRTEQGPIKTGS*LGPSQP
Trigger: TGGCTGTGAAGGGCCCAGCCAGCTCCCTGTTTTGAT...GGGTCCTTGTTCAGTTCTTGTCCAGGCCTTTGGGTGAGGGACACTGGTAGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TTGACTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACAAAGCACCATGGGTTTaGGAAGATGGTCTGGTCCAT +
Preference number: 4 (lower is better)
Translates to: LTMQSQHVAPKPQADAPDKAPWV*EDGLVH
Trigger: ATGGACCAGACCATCTTCCCAAACCCATGGTGCTTT...GTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp CTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGCTGTTGCACAGAGGGGAAAAAGCACCATaGGTTTGGGAAGATGGTCTG +
Preference number: 4 (lower is better)
Translates to: LQGLLRISSHKTPELLHRGEKAP*VWEDGL
Trigger: CAGACCATCTTCCCAAACCCATGGTGCTTTTTCCCC...TCTGTGCAACAGCTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp TTGACTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACGAGTCTAGGTTGAGTTaGGGAAAAAGCACCATGGGT +
Preference number: 4 (lower is better)
Translates to: LTMQSQHVAPKPQADAPDESRLS*GKSTMG
Trigger: ACCCATGGTGCTTTTTCCCCAACTCAACCTAGACTC...GTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAGTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp TTTGGGAAGATGGTCTGGTCCATGCAGAGAGTGGTCTGGCCCTTGAGTGCAGGGGTTCTTTCCCATAGATaGCCCAGTGCAGGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: FGKMVWSMQRVVWPLSAGVLSHR*PSAGVG
Trigger: CCCAACACCTGCACTGGGCCATCTATGGGAAAGAAC...CCCTGCACTCAAGGGCCAGACCACTCTCTGCATGGACCAGACCATCTTCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp TTGAGTTGGGGAAAAAGCACCATGGGTTTGGGAAGATGGTCTGGTCCATGCAGAAGAGCCAGTCCCATCTaGAGGAGGGGAGGAGGAGCG +
Preference number: 4 (lower is better)
Translates to: LSWGKSTMGLGRWSGPCRRASPI*RRGGGA
Trigger: CGCTCCTCCTCCCCTCCTCCAGATGGGACTGGCTCT...TCTGCATGGACCAGACCATCTTCCCAAACCCATGGTGCTTTTTCCCCAACTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS-3UTR TCA 90 bp TTGACTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACTCTTTGGAGTGCACATaGGTAATCAACAATGAGGCG +
Preference number: 4 (lower is better)
Translates to: LTMQSQHVAPKPQADAPDSLECT*VINNEA
Trigger: CGCCTCATTGTTGATTACTCATGTGCACTCCAAAGA...GTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp ATCCCTACCAGTGTCCCTCACCCAAAGGCCTGGACAAGAACTGAACAAGGACCCGTCATTGAAGTCCAGTaGAGGGGAGTTCACAGGAGC +
Preference number: 4 (lower is better)
Translates to: IPTSVPHPKAWTRTEQGPVIEVQ*RGVHRS
Trigger: GCTCCTGTGAACTCCCCTTCACTGGACTTCAATGAC...GGGTCCTTGTTCAGTTCTTGTCCAGGCCTTTGGGTGAGGGACACTGGTAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTGTCGGAAGAGTCACTaGGCTCAGTGGGGATGTCCT +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALCRKSH*AQWGCP
Trigger: AGGACATCCCCACTGAGCTCAGTGACTCTTCCGACA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGGGAAGGGCGAGTTGGTaGAGAGGAGGTCATAGAGCT +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALGRASW*RGGHRA
Trigger: AGCTCTATGACCTCCTCTTCACCAACTCGCCCTTCC...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp TTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCAGCGCCGCTGCTCCATaGAATCCCGCTGGAAGGGCG +
Preference number: 4 (lower is better)
Translates to: FIWSMYMYCTGLLQPPCSSAAAP*NPAGRA
Trigger: CGCCCTTCCAGCGGGATTTCATGGAGCAGCGGCGCT...GGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GATTTGGCTGGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACAGCGCCGCTGCTCCATaGAATCCCGCTGGAAGGGCG +
Preference number: 4 (lower is better)
Translates to: DLAGQPCVFLGTSSKFSDSAAAP*NPAGRA
Trigger: CGCCCTTCCAGCGGGATTTCATGGAGCAGCGGCGCT...GTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCCAGCCAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTGGTCTGTGTCTCCCTaGCAGTGGCAGTTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALWSVSP*QWQFWE
Trigger: CTCCCAAAACTGCCACTGTCAGGGAGACACAGACCA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp TATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCAGGGCACGTCGTGGGTaGGGACTTCGGCATCTATCA +
Preference number: 4 (lower is better)
Translates to: YGLCTCIAQASCSHPVPARARRG*GLRHLS
Trigger: TGATAGATGCCGAAGTCCTCACCCACGACGTGCCCT...GGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp ATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCGCTCTGTGGAGACCCTaGGTCGGCTCTTGTTCCGAG +
Preference number: 4 (lower is better)
Translates to: IWSMYMYCTGLLQPPCSCALWRP*VGSCSE
Trigger: CTCGGAACAAGAGCCGACTCAGGGTCTCCACAGAGC...GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GCATCTTCTAGAAGAAAACACAGAGGTGAAGAGGATTGGGGCCAACCTGCTGGAGCTCTGTGGAGACCCTaGGTCGGCTCTTGTTCCGAG +
Preference number: 4 (lower is better)
Translates to: ASSRRKHRGEEDWGQPAGALWRP*VGSCSE
Trigger: CTCGGAACAAGAGCCGACTCAGGGTCTCCACAGAGC...TCCAGCAGGTTGGCCCCAATCCTCTTCACCTCTGTGTTTTCTTCTAGAAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACCTTGCGCACCATCTGTGGGCGTGGTaGCCGGGCTCATCACCTCTT +
Preference number: 4 (lower is better)
Translates to: GQPCVFLGTSSKFSDLAHHLWAW*PGSSPL
Trigger: AAGAGGTGATGAGCCCGGTCACCACGCCCACAGATG...GTGCGCAAGGTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGGACCTGATGCCGTTCTaGAGGTTGATGAGCGAGTCC +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALDLMPF*RLMSES
Trigger: GGACTCGCTCATCAACCTTCAGAACGGCATCAGGTC...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp AACTCCCTGCGGCCAGGTCTGCTCTGTCACTTGACTCCCAACAAAGAACCCTTTGACCTGATGCCGTTCTaGAGGTTGATGAGCGAGTCC +
Preference number: 4 (lower is better)
Translates to: NSLRPGLLCHLTPNKEPFDLMPF*RLMSES
Trigger: GGACTCGCTCATCAACCTTCAGAACGGCATCAGGTC...AAAGGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGACCTGGCCGCAGGGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp ATCCCTACCAGTGTCCCTCACCCAAAGGCCTGGACAAGAACTGAACAAGGACCCACTGACAGCTCTAAGTaGAGGCCTCAGAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: IPTSVPHPKAWTRTEQGPTDSSK*RPQSHR
Trigger: TCTGTGGCTCTGAGGCCTTCACTTAGAGCTGTCAGT...GGGTCCTTGTTCAGTTCTTGTCCAGGCCTTTGGGTGAGGGACACTGGTAGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GACTCTTTCATGAATCTCCACAAGCTCTGCCTGGAGCTGGTGGGACTCTTTTGGAGAGCCCATGAGCCTTaGTCCCTACCAGTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: DSFMNLHKLCLELVGLFWRAHEP*SLPVSL
Trigger: GAGGGACACTGGTAGGGATCAAGGCTCATGGGCTCT...CCAAAAGAGTCCCACCAGCTCCAGGCAGAGCTTGTGGAGATTCATGAAAGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp CTCCAGTCCTGGCTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGTCTTTCGCAAGCTATTaGCTAAGGGGGAAGAGATTT +
Preference number: 4 (lower is better)
Translates to: LQSWLQGLLRISSHKTPESFASY*LRGKRF
Trigger: AAATCTCTTCCCCCTTAGTCAATAGCTTGCGAAAGA...CTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAGCCAGGACTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp AACTCCCTGCGGCCAGGTCTGCTCTGTCACTTGACTCCCAACAAAGAACCCTTTCCCAACTCCCTCCTGTaGCAGGAGGATACTGAAGCT +
Preference number: 4 (lower is better)
Translates to: NSLRPGLLCHLTPNKEPFPNSLL*QEDTEA
Trigger: AGCTTCAGTATCCTCCTGTCACAGGAGGGAGTTGGG...AAAGGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGACCTGGCCGCAGGGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TTGACTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACAGAAGCAAGGAGGGCTaGAGAACGACAATGTTCTTT +
Preference number: 4 (lower is better)
Translates to: LTMQSQHVAPKPQADAPDRSKEG*RTTMFF
Trigger: AAAGAACATTGTCGTTCTTCAGCCCTCCTTGCTTCT...GTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GGAGGAGAGTATCCTTCAGAACACGAGTCTCGGGAGCCTGCCACCACACAATGCCCTTGGAGTCTAGGTTaGGTTGGGGAAAAAGCACCA +
Preference number: 4 (lower is better)
Translates to: GGEYPSEHESREPATTQCPWSLG*VGEKAP
Trigger: TGGTGCTTTTTCCCCAACTCAACCTAGACTCCAAGG...GCATTGTGTGGTGGCAGGCTCCCGAGACTCGTGTTCTGAAGGATACTCTCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGAGCTGTGGCTGCCGCTaGCAGTTTCTGATGAGGATG +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALSCGCR*QFLMRM
Trigger: CATCCTCATCAGAAACTGGCAGCGGCAGCCACAGCT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456860.6
ENST00000529750.5
CDS-3UTR GCA 90 bp TTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCGAGCAGGCCGGCGTaGTGCGGTTGGAGTTACTGG +
Preference number: 4 (lower is better)
Translates to: LYGLCTCIAQASCSHPVPASRPA*CGWSYW
Trigger: CCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGC...AGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR GCA 90 bp ATATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTCTGCGCTGCACGCCCTaGTCCGGTGTGGACGGGGAC +
Preference number: 4 (lower is better)
Translates to: IFIWSMYMYCTGLLQPPCLRCTP*SGVDGD
Trigger: GTCCCCGTCCACACCGGAGCAGGGCGTGCAGCGCAG...ACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR GCA 90 bp TTTCTGCTCTGCACTATGACAGCAAGCAGGGGCCTTAAAAGATGGCCTTCCAGGAGACGGGGGCCTCACTaGTCCCTGTGGATGTTAGTG +
Preference number: 4 (lower is better)
Translates to: FLLCTMTASRGLKRWPSRRRGPH*SLWMLV
Trigger: CACTAACATCCACAGGGAGCAGTGAGGCCCCCGTCT...CCTGGAAGGCCATCTTTTAAGGCCCCTGCTTGCTGTCATAGTGCAGAGCAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp CTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGCTGTTGCACAGATCTCAGCCAAATAAGTaGTCTCCGTTTTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LQGLLRISSHKTPELLHRSQPNK*SPFWPA
Trigger: AGCTGGCCAAAACGGAGAGCACTTATTTGGCTGAGA...TCTGTGCAACAGCTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp TGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGGCCTGGACCTCTCCTaGACAGAAGAGAGGATCAGG +
Preference number: 4 (lower is better)
Translates to: WSMYMYCTGLLQPPCSCLGLDLS*TEERIR
Trigger: CCTGATCCTCTCTTCTGTGCAGGAGAGGTCCAGGCC...AAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS-3UTR GCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGAAACCTAGCAGAAGCTaGACCTCTCTTCCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALKPSRS*TSLPPG
Trigger: GCCTGGGGGAAGAGAGGTGCAGCTTCTGCTAGGTTT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456860.6
CDS-3UTR GCA 90 bp GCATCTTCTAGAAGAAAACACAGAGGTGAAGAGGATTGGGGCCAACCTGCTGGACGAGTCTCGGGAGCCTaGCACCACACAATGCAGCCT +
Preference number: 4 (lower is better)
Translates to: ASSRRKHRGEEDWGQPAGRVSGA*HHTMQP
Trigger: AGGCTGCATTGTGTGGTGGCAGGCTCCCGAGACTCG...TCCAGCAGGTTGGCCCCAATCCTCTTCACCTCTGTGTTTTCTTCTAGAAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp ACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCCTCTGTGGGTAGACCCTaGACCCCGGACGTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: TTMFFKPSDVGEIVSISSSVGRP*TPDVAR
Trigger: CCTTGCCACGTCCGGGGTGCAGGGTCTACCCACAGA...GGAGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp TCTGTGGGTAGACCCTGCACCCCGGACGTGGCAAGGGCCTTCTCTCCCTCTCTCGTCAAAAACTGTAATTaGCACAGGGAATTAAAGGCC +
Preference number: 4 (lower is better)
Translates to: SVGRPCTPDVARAFSPSLVKNCN*HRELKA
Trigger: GGCCTTTAATTCCCTGTGGCAATTACAGTTTTTGAC...GAGAGAGGGAGAGAAGGCCCTTGCCACGTCCGGGGTGCAGGGTCTACCCACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GGGAATAGTTTTGGCTTCTGGCTGTGCCAAGGGGGAGATTTCCAGCAGTCTGCACAGTACTGCCCTCTCTaGCACCTTTTCCTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: GNSFGFWLCQGGDFQQSAQYCPL*HLFLLG
Trigger: TCCCAGGAGGAAAAGGTGGCAGAGAGGGCAGTACTG...TGCAGACTGCTGGAAATCTCCCCCTTGGCACAGCCAGAAGCCAAAACTATTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GCTCAGATGCTTTTTCTATGTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTCCAGACAGAGCCAGCTaGCTTGCCTGGAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: AQMLFLCANCLRQSSPLAPDRAS*LAWSRG
Trigger: GCCTCTGCTCCAGGCAAGGCAGCTGGCTCTGTCTGG...AGCCAGTGGAGACGACTGTCTGAGACAGTTTGCACATAGAAAAAGCATCTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp ATTCCAGTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCTGGACCAGACCGGGCTaGCCTCGGGCGCACCCTGCG +
Preference number: 4 (lower is better)
Translates to: IPVNTGKLVSHAVFTICSWTRPG*PRAHPA
Trigger: CGCAGGGTGCGCCCGAGGGCAGCCCGGTCTGGTCCA...GGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCACTGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR GCA 90 bp TGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTTCCTTCCTTGGACCAGACCGGGCTaGCCTCGGGCGCACCCTGCG +
Preference number: 4 (lower is better)
Translates to: WKVSKPCCLYHLFHFFLPWTRPG*PRAHPA
Trigger: CGCAGGGTGCGCCCGAGGGCAGCCCGGTCTGGTCCA...AGGAAGGAAGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR GCA 90 bp GGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACCTTGCGCACCCGCGAGCCTGGCTTTaGAAAGAGGAGAGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: GQPCVFLGTSSKFSDLAHPRAWL*KEESQS
Trigger: GGACTGGCTCTCCTCTTTGCAAAGCCAGGCTCGCGG...GTGCGCAAGGTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS-3UTR GCA 90 bp ATGGCCAGACAACTCGACTGCACTCGACCCGTGTTCTTTCCCATAGATGGCCCACCCTGCCATATGTATTaGACAGGCCTCTTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: MARQLDCTRPVFFPIDGPPCHMY*TGLLQP
Trigger: TGGCTGCAAGAGGCCTGTGCAATACATATGGCAGGG...TGGGCCATCTATGGGAAAGAACACGGGTCGAGTGCAGTCGAGTTGTCTGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGCTCCCAGCTGAAAGCTaGGCTTGGAGGCAAAGGACA +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALLPAES*AWRQRT
Trigger: TGTCCTTTGCCTCCAAGCCCAGCTTTCAGCTGGGAG...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456860.6
ENST00000529750.5
CDS-3UTR CCA 90 bp GATTTGGCTGGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACCTGGTTCTGCGGGGTTaGCGAGCGAGACCGCTTCCG +
Preference number: 4 (lower is better)
Translates to: DLAGQPCVFLGTSSKFSDLVLRG*RARPLP
Trigger: CGGAAGCGGTCTCGCTCGCCAACCCCGCAGAACCAG...GTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCCAGCCAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000638157.1
CDS-3UTR CCA 90 bp GCATCTTCTAGAAGAAAACACAGAGGTGAAGAGGATTGGGGCCAACCTGCTGGAATGGTGTCTCCGTCCTaGTTCTGCGGGGTTGGCGAG +
Preference number: 4 (lower is better)
Translates to: ASSRRKHRGEEDWGQPAGMVSPS*FCGVGE
Trigger: CTCGCCAACCCCGCAGAACCAGGACGGAGACACCAT...TCCAGCAGGTTGGCCCCAATCCTCTTCACCTCTGTGTTTTCTTCTAGAAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000638157.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGAGCCCTTCTCCACCATaGTGTCTCCGTCCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALSPSPP*CLRPGS
Trigger: AGAACCAGGACGGAGACACCATGGTGGAGAAGGGCT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR CCA 90 bp AACTCCCTGCGGCCAGGTCTGCTCTGTCACTTGACTCCCAACAAAGAACCCTTTAGCCCTTCTCCACCATaGTGTCTCCGTCCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: NSLRPGLLCHLTPNKEPFSPSPP*CLRPGS
Trigger: AGAACCAGGACGGAGACACCATGGTGGAGAAGGGCT...AAAGGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGACCTGGCCGCAGGGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529432.5
ENST00000529750.5
CDS-3UTR CCA 90 bp GTGGGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCACATTATACCAACTCTaGCTTTTCTTGGAATTCTTG +
Preference number: 4 (lower is better)
Translates to: VGGGRSGEVGAERRFLPSTLYQL*LFLEFL
Trigger: CAAGAATTCCAAGAAAAGCCAGAGTTGGTATAATGT...GGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529432.5
ENST00000529750.5
CDS-3UTR CCA 90 bp CTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACAGAGTTCTCTGCTTGTAGGTaGGGCTTAACACATTATACC +
Preference number: 4 (lower is better)
Translates to: LCNLSTWHPSPRPMPQTEFSACR*GLTHYT
Trigger: GGTATAATGTGTTAAGCCCCACCTACAAGCAGAGAA...CTCTGTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000638157.1
CDS-3UTR CCA 90 bp AGTTTTGGCTTCTGGCTGTGCCAAGGGGGAGATTTCCAGCAGTCTGCACCATGCGAGGCGCTCCGTGTCTaGAAGCTGCTTAAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: SFGFWLCQGGDFQQSAPCEALRV*KLLKEL
Trigger: AAGCTCTTTAAGCAGCTTCCAGACACGGAGCGCCTC...GCATGGTGCAGACTGCTGGAAATCTCCCCCTTGGCACAGCCAGAAGCCAAAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp ATGGCCAGACAACTCGACTGCACTCGACCCGTGTTCTTTCCCATAGATGGCCCAGAGGCGCTCCGTGTCTaGAAGCTGCTTAAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: MARQLDCTRPVFFPIDGPEALRV*KLLKEL
Trigger: AAGCTCTTTAAGCAGCTTCCAGACACGGAGCGCCTC...TGGGCCATCTATGGGAAAGAACACGGGTCGAGTGCAGTCGAGTTGTCTGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATAGTCCTCGTCATCACTaGTCAGGCCCAATTCGTTCC +
Preference number: 4 (lower is better)
Translates to: ASCLAWSRGHPFASAMSYSPRHH*SGPIRS
Trigger: GGAACGAATTGGGCCTGACCAGTGATGACGAGGACT...ATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTGGGCAGCTGTGGACTaGCATCTGGCTTGGTCTCTA +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALWAAVD*HLAWSL
Trigger: TAGAGACCAAGCCAGATGCCAGTCCACAGCTGCCCA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GAACCCCCATTGCCAAGTCTGAGAAACTCAGGATTGGGAATGGCTCCCGTAGGGCCTCACTGCTCCCTGTaGATGTTAGTGTGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: EPPLPSLRNSGLGMAPVGPHCSL*MLVCCW
Trigger: CCAACAGCACACTAACATCCACAGGGAGCAGTGAGG...CCCTACGGGAGCCATTCCCAATCCTGAGTTTCTCAGACTTGGCAATGGGGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp ATGGCCAGACAACTCGACTGCACTCGACCCGTGTTCTTTCCCATAGATGGCCCACCTCACTGCTCCCTGTaGATGTTAGTGTGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: MARQLDCTRPVFFPIDGPPHCSL*MLVCCW
Trigger: CCAACAGCACACTAACATCCACAGGGAGCAGTGAGG...TGGGCCATCTATGGGAAAGAACACGGGTCGAGTGCAGTCGAGTTGTCTGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCTCATCCTTTTTCCATGGATaGAAGATGATATCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: GGGRSGEVGAERRFLPSSSFFHG*KMISEK
Trigger: CTTCTCTGATATCATCTTCCATCCATGGAAAAAGGA...TGAGGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGCAGGTGGAAACCGTTaGGGGTGTCCTCCGGGATAT +
Preference number: 4 (lower is better)
Translates to: WSMYMYCTGLLQPPCSCLAGGNR*GCPPGY
Trigger: ATATCCCGGAGGACACCCCCAACGGTTTCCACCTGC...AAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GTGGGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCATAAATGACTACTTCTaGAAGTTGCCTAAACCCAAA +
Preference number: 4 (lower is better)
Translates to: VGGGRSGEVGAERRFLPSINDYF*KLPKPK
Trigger: TTTGGGTTTAGGCAACTTCCAGAAGTAGTCATTTAT...GGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS-3UTR CCA 90 bp TGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTAGGGCTCTCAGAAGCTaGGGGCGCTTCTTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: WSMYMYCTGLLQPPCSCLRALRS*GRFFAL
Trigger: CAGAGCAAAGAAGCGCCCCCAGCTTCTGAGAGCCCT...AAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529432.5
CDS-3UTR CCA 90 bp GAACCCCCATTGCCAAGTCTGAGAAACTCAGGATTGGGAATGGCTCCCGTAGGGAGCTCTGCCTGGAGCTaGTGGGACTCTTTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: EPPLPSLRNSGLGMAPVGSSAWS*WDSFGH
Trigger: ATGACCAAAAGAGTCCCACCAGCTCCAGGCAGAGCT...CCCTACGGGAGCCATTCCCAATCCTGAGTTTCTCAGACTTGGCAATGGGGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp AGCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTAAGTCTTCCCAGCCTCTaGCCTAACCCCCAAGATGAT +
Preference number: 4 (lower is better)
Translates to: SQLPCLEQRPPFCFCNVLSLPSL*PNPQDD
Trigger: ATCATCTTGGGGGTTAGGCCAGAGGCTGGGAAGACT...TAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GACTCTTTCATGAATCTCCACAAGCTCTGCCTGGAGCTGGTGGGACTCTTTTGGTCACCCTGGGTCTCCTaGGAATGCAGACACTGCCCT +
Preference number: 4 (lower is better)
Translates to: DSFMNLHKLCLELVGLFWSPWVS*ECRHCP
Trigger: AGGGCAGTGTCTGCATTCCCAGGAGACCCAGGGTGA...CCAAAAGAGTCCCACCAGCTCCAGGCAGAGCTTGTGGAGATTCATGAAAGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TTGAGTTGGGGAAAAAGCACCATGGGTTTGGGAAGATGGTCTGGTCCATGCAGAATCCAGGGGCCACTATaGCCTCTGACCCATCCCTCC +
Preference number: 4 (lower is better)
Translates to: LSWGKSTMGLGRWSGPCRIQGPL*PLTHPS
Trigger: GGAGGGATGGGTCAGAGGCCATAGTGGCCCCTGGAT...TCTGCATGGACCAGACCATCTTCCCAAACCCATGGTGCTTTTTCCCCAACTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp TTTACCATTTGTTCCACTTCTTCCTTCCTAGGGTTTAAGGAGAAGAAAAGGGTCTGTTGGCCGCCGGCATaGGGGCCGTCGCCTCTGCGC +
Preference number: 4 (lower is better)
Translates to: FTICSTSSFLGFKEKKRVCWPPA*GPSPLR
Trigger: GCGCAGAGGCGACGGCCCCCATGCCGGCGGCCAACA...GACCCTTTTCTTCTCCTTAAACCCTAGGAAGGAAGAAGTGGAACAAATGGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CCA 90 bp ATTCCAGTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCTGTTGGCCGCCGGCATaGGGGCCGTCGCCTCTGCGC +
Preference number: 4 (lower is better)
Translates to: IPVNTGKLVSHAVFTICSCWPPA*GPSPLR
Trigger: GCGCAGAGGCGACGGCCCCCATGCCGGCGGCCAACA...GGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCACTGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CCA 90 bp ACTGTAAGAGGTCAGGTACAGTGCTGTGACGATACAAAGATGAACATGATTGGTGGCGCGGGGACGCGCTaGGTGTGGAGCAGTTGGACC +
Preference number: 4 (lower is better)
Translates to: TVRGQVQCCDDTKMNMIGGAGTR*VWSSWT
Trigger: GGTCCAACTGCTCCACACCCAGCGCGTCCCCGCGCC...ACCAATCATGTTCATCTTTGTATCGTCACAGCACTGTACCTGACCTCTTACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CCA 90 bp ATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCACTCTGGAGCTGCGTaGACTTGCTGCCCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: IWSMYMYCTGLLQPPCSCHSGAA*TCCPCS
Trigger: GCTGCAAGGGCAGCAAGTCCACGCAGCTCCAGAGTG...GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS-3UTR CCA 90 bp TATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGTGGGACCTCAAGGGCTaGGGGCTCACTCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: YMVYVHVLHRPLAATLFLWDLKG*GLTLEL
Trigger: CAGCTCCAGAGTGAGCCCCCAGCCCTTGAGGTCCCA...CAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS-3UTR CCA 90 bp GACTCTTTCATGAATCTCCACAAGCTCTGCCTGGAGCTGGTGGGACTCTTTTGGTGGATGGGTGGCCTCTaGTTTCTCAGCAGAGGGCCT +
Preference number: 4 (lower is better)
Translates to: DSFMNLHKLCLELVGLFWWMGGL*FLSRGP
Trigger: AGGCCCTCTGCTGAGAAACCAGAGGCCACCCATCCA...CCAAAAGAGTCCCACCAGCTCCAGGCAGAGCTTGTGGAGATTCATGAAAGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646146.1
3UTR CAA 72 bp GCAGGATTTGTACTCCAACCCCCGCCAGAACCCCCATaGCCAAGTCTGAGAAACTCAGGATTGGGAATGGCT +
Preference number: 4 (lower is better)
Translates to: AGFVLQPPPEPP*PSLRNSGLGMA
Trigger: AGCCATTCCCAATCCTGAGTTTCTCAGACTTGGCAATGGGGGTTCTGGCGGGGGTTGGAGTACAAATCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGAGTATCCCATTGTGTTaGAGTCGTCGTCAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALSIPLC*SRRQGA
Trigger: TGCCCCCTGACGACGACTTCAACACAATGGGATACT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGGTCATTGAAGTCCAGTaGAGGGGAGTTCACAGGAGC +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALVIEVQ*RGVHRS
Trigger: GCTCCTGTGAACTCCCCTTCACTGGACTTCAATGAC...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp AACTCCCTGCGGCCAGGTCTGCTCTGTCACTTGACTCCCAACAAAGAACCCTTTGTCATTGAAGTCCAGTaGAGGGGAGTTCACAGGAGC +
Preference number: 4 (lower is better)
Translates to: NSLRPGLLCHLTPNKEPFVIEVQ*RGVHRS
Trigger: GCTCCTGTGAACTCCCCTTCACTGGACTTCAATGAC...AAAGGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGACCTGGCCGCAGGGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GGAGGAGAGTATCCTTCAGAACACGAGTCTCGGGAGCCTGCCACCACACAATGCTGTCCTCATTGTCATTaGAGTCCAGTGAAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: GGEYPSEHESREPATTQCCPHCH*SPVKGS
Trigger: ACTCCCCTTCACTGGACTTCAATGACAATGAGGACA...GCATTGTGTGGTGGCAGGCTCCCGAGACTCGTGTTCTGAAGGATACTCTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GACTCTTTCATGAATCTCCACAAGCTCTGCCTGGAGCTGGTGGGACTCTTTTGGGGAAGGGCGAGTTGGTaGAGAGGAGGTCATAGAGCT +
Preference number: 4 (lower is better)
Translates to: DSFMNLHKLCLELVGLFWGRASW*RGGHRA
Trigger: AGCTCTATGACCTCCTCTTCACCAACTCGCCCTTCC...CCAAAAGAGTCCCACCAGCTCCAGGCAGAGCTTGTGGAGATTCATGAAAGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp ATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCAGGGCACGTCGTGGGTaGGGACTTCGGCATCTATCA +
Preference number: 4 (lower is better)
Translates to: IWSMYMYCTGLLQPPCSCRARRG*GLRHLS
Trigger: TGATAGATGCCGAAGTCCTCACCCACGACGTGCCCT...GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp CACATGCACCTTTGCCAAATCCTTCCCTCCAGTGGCTCAGATGCTTTTTCTATGGCTCTGTGGAGACCCTaGGTCGGCTCTTGTTCCGAG +
Preference number: 4 (lower is better)
Translates to: HMHLCQILPSSGSDAFSMALWRP*VGSCSE
Trigger: CTCGGAACAAGAGCCGACTCAGGGTCTCCACAGAGC...CATAGAAAAAGCATCTGAGCCACTGGAGGGAAGGATTTGGCAAAGGTGCATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp ACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCCGCTCTGTGGAGACCCTaGGTCGGCTCTTGTTCCGAG +
Preference number: 4 (lower is better)
Translates to: TTMFFKPSDVGEIVSISSALWRP*VGSCSE
Trigger: CTCGGAACAAGAGCCGACTCAGGGTCTCCACAGAGC...GGAGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp ACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCCATCACCTCTTCCAGGTaGGGGACTCGCAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: TTMFFKPSDVGEIVSISSITSSR*GTRRWA
Trigger: TGCCCACCTGCGAGTCCCTCACCTGGAAGAGGTGAT...GGAGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTAATGTTGGTTCGTTCAAAGCATCTGTGGGCGTGGTaGCCGGGCTCATCACCTCTT +
Preference number: 4 (lower is better)
Translates to: VQTVSDSRLHWLMLVRSKHLWAW*PGSSPL
Trigger: AAGAGGTGATGAGCCCGGTCACCACGCCCACAGATG...CTTTGAACGAACCAACATTAGCCAGTGGAGACGACTGTCTGAGACAGTTTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGAACCTGCCACATGTTTaGTCCTGTGGCCCACATCCT +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALNLPHV*SCGPHP
Trigger: AGGATGTGGGCCACAGGATCAAACATGTGGCAGGTT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GGTTGGGGGAATGAAAGTCAAGGATGTCAAGGATGTCAAGTGGTGAATGGGATGGACCCTGCCAGGCAGTaGGGGTCTGCGTGGTGTATT +
Preference number: 4 (lower is better)
Translates to: GWGNESQGCQGCQVVNGMDPARQ*GSAWCI
Trigger: AATACACCACGCAGACCCTCACTGCCTGGCAGGGTC...CATCCCATTCACCACTTGACATCCTTGACATCCTTGACTTTCATTCCCCCAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp CACTCGACCCGTGTTCTTTCCCATAGATGGCCCAGTGCAGGTGTTGGGGCTGCTGTCAAGGAGCATCACTaGGGATTTGATGATTTCCCT +
Preference number: 4 (lower is better)
Translates to: HSTRVLSHRWPSAGVGAAVKEHH*GFDDFP
Trigger: AGGGAAATCATCAAATCCTCAGTGATGCTCCTTGAC...AGCAGCCCCAACACCTGCACTGGGCCATCTATGGGAAAGAACACGGGTCGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp TGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGACCTGATGCCGTTCTaGAGGTTGATGAGCGAGTCC +
Preference number: 4 (lower is better)
Translates to: WSMYMYCTGLLQPPCSCLDLMPF*RLMSES
Trigger: GGACTCGCTCATCAACCTTCAGAACGGCATCAGGTC...AAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp ATATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTAGGGGAGGTCGGTGCTaGGAGGCGGTTCCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: IFIWSMYMYCTGLLQPPCRGGRC*EAVPAL
Trigger: GAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCT...ACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp AACCCCCAAGATGATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAAAGGGGAGGTCGGTGCTaGGAGGCGGTTCCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: NPQDDVKARTYLKDDLAQRGGRC*EAVPAL
Trigger: GAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCT...TTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATCATCTTGGGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GAACCCCCATTGCCAAGTCTGAGAAACTCAGGATTGGGAATGGCTCCCGTAGGGCGTTCAAAGAGCAAATaGGGCTGGCAACCCATCTTG +
Preference number: 4 (lower is better)
Translates to: EPPLPSLRNSGLGMAPVGRSKSK*GWQPIL
Trigger: CAAGATGGGTTGCCAGCCTCATTTGCTCTTTGAACG...CCCTACGGGAGCCATTCCCAATCCTGAGTTTCTCAGACTTGGCAATGGGGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp AACTCCCTGCGGCCAGGTCTGCTCTGTCACTTGACTCCCAACAAAGAACCCTTTTCCTGGGAATGGTCCTaGGAGGTAAAGCAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: NSLRPGLLCHLTPNKEPFSWEWS*EVKQKQ
Trigger: CTGCTTCTGCTTTACCTCTCAGGACCATTCCCAGGA...AAAGGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGACCTGGCCGCAGGGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp AGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATTGTCCAGGAGGGCTCTTCTaGCATACTCAGTACTGCCCT +
Preference number: 4 (lower is better)
Translates to: SCLAWSRGHPFASAMSYCPGGLF*HTQYCP
Trigger: AGGGCAGTACTGAGTATGTCAGAAGAGCCCTCCTGG...ACAATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GTCCTGGCTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGCTGTTCCTACAAGAGATCCATaGTTCTTAAAGGACATTCCC +
Preference number: 4 (lower is better)
Translates to: VLAPGPVEDLQSQDPGAVPTRDP*FLKDIP
Trigger: GGGAATGTCCTTTAAGAATCATGGATCTCTTGTAGG...AACAGCTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAGCCAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp AACTCCCTGCGGCCAGGTCTGCTCTGTCACTTGACTCCCAACAAAGAACCCTTTGAGAGAGTCGCACCATaGTTAGCTTGTCTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: NSLRPGLLCHLTPNKEPFERVAP*LACLRP
Trigger: TGGCCTCAGACAAGCTAATCATGGTGCGACTCTCTC...AAAGGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGACCTGGCCGCAGGGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp AGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATTGTCCCAACTCCCTCCTGTaGCAGGAGGATACTGAAGCT +
Preference number: 4 (lower is better)
Translates to: SCLAWSRGHPFASAMSYCPNSLL*QEDTEA
Trigger: AGCTTCAGTATCCTCCTGTCACAGGAGGGAGTTGGG...ACAATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTCCCAACTCCCTCCTGTaGCAGGAGGATACTGAAGCT +
Preference number: 4 (lower is better)
Translates to: WSMYMYCTGLLQPPCSCLPNSLL*QEDTEA
Trigger: AGCTTCAGTATCCTCCTGTCACAGGAGGGAGTTGGG...AAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp AGTTTTGGCTTCTGGCTGTGCCAAGGGGGAGATTTCCAGCAGTCTGCACCATGCTCCTGGCAGAGCAATTaGGAAAGTCCACCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: SFGFWLCQGGDFQQSAPCSWQSN*ESPPSL
Trigger: AAGACTGGGTGGACTTTCTCAATTGCTCTGCCAGGA...GCATGGTGCAGACTGCTGGAAATCTCCCCCTTGGCACAGCCAGAAGCCAAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp ATGGCCAGACAACTCGACTGCACTCGACCCGTGTTCTTTCCCATAGATGGCCCAACAAAGCATTCCTCTTaGGCTCTCTTTGTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: MARQLDCTRPVFFPIDGPTKHSS*ALFVLP
Trigger: GGGGAGGACAAAGAGAGCTCAAGAGGAATGCTTTGT...TGGGCCATCTATGGGAAAGAACACGGGTCGAGTGCAGTCGAGTTGTCTGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TTTCTGCTCTGCACTATGACAGCAAGCAGGGGCCTTAAAAGATGGCCTTCCAGGATGAAGCTTCACAAGTaGGCCGAGGTGGTCAGCGTG +
Preference number: 4 (lower is better)
Translates to: FLLCTMTASRGLKRWPSRMKLHK*AEVVSV
Trigger: CACGCTGACCACCTCGGCTCACTTGTGAAGCTTCAT...CCTGGAAGGCCATCTTTTAAGGCCCCTGCTTGCTGTCATAGTGCAGAGCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646146.1
CDS-3UTR GCA 90 bp ATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCGCGAGCAGGCCGGCGTaGTGCGGTTGGAGTTACTGG +
Preference number: 4 (lower is better)
Translates to: IYMVYVHVLHRPLAATLFASRPA*CGWSYW
Trigger: CCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGC...GAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR GCA 90 bp GATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAACTCCCTCCTGTGTCTCCGTCCTGGTTCTaGGGGGTTGGCGAGCGAGAC +
Preference number: 4 (lower is better)
Translates to: DVKARTYLKDDLAQLPPVSPSWF*GVGERD
Trigger: GTCTCGCTCGCCAACCCCGCAGAACCAGGACGGAGA...CACAGGAGGGAGTTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529432.5
ENST00000529750.5
CDS-3UTR GCA 90 bp AGCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATCAAGGAGAGCATTCTaGCAGAGCCGGAACATCATC +
Preference number: 4 (lower is better)
Translates to: SQLPCLEQRPPFCFCNVLSRRAF*QSRNII
Trigger: GATGATGTTCCGGCTCTGGCAGAATGCTCTCCTTGA...TAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGACTTCATTCACGTACTaGCGGCCACTCAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALTSFTY*RPLRSS
Trigger: TGAGGACCTGAGTGGCCGGCAGTACGTGAATGAAGT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp ATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCGTGTCCTCCGGGATATaGCGCGTCTGTGTGGAACCT +
Preference number: 4 (lower is better)
Translates to: IWSMYMYCTGLLQPPCSCVSSGI*RVCVEP
Trigger: AGGTTCCACACAGACGCGGCATATCCCGGAGGACAC...GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp TTGAGTTGGGGAAAAAGCACCATGGGTTTGGGAAGATGGTCTGGTCCATGCAGAAGCTTGGACACGCTCTaGAGGTGGAAACCGTTGGGG +
Preference number: 4 (lower is better)
Translates to: LSWGKSTMGLGRWSGPCRSLDTL*RWKPLG
Trigger: CCCCAACGGTTTCCACCTGCAGAGCGTGTCCAAGCT...TCTGCATGGACCAGACCATCTTCCCAAACCCATGGTGCTTTTTCCCCAACTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGCAGGCAGTGAGGGTCTaGGTGGTGTATTCCAACATC +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALQAVRV*VVYSNI
Trigger: GATGTTGGAATACACCACGCAGACCCTCACTGCCTG...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp GTACTAGCAGTAAGTTTTCTGACCTTGCGCACAGCGCCAGGCAAAGTACAGTTATGGAGCCTTAGACCCTaGCAGGCAGTGAGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: VLAVSFLTLRTAPGKVQLWSLRP*QAVRVC
Trigger: GCAGACCCTCACTGCCTGGCAGGGTCTAAGGCTCCA...TAACTGTACTTTGCCTGGCGCTGTGCGCAAGGTCAGAAAACTTACTGCTAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp ATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTCCTGCCCTCCTCAGCTaGTCCACCATAAGAAAACGC +
Preference number: 4 (lower is better)
Translates to: MVYVHVLHRPLAATLFLPPALLS*STIRKR
Trigger: GCGTTTTCTTATGGTGGAGCAGCTGAGGAGGGCAGG...AGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp TTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTCTGAGAGGCGGTTCCTaGCCTCCTCAGCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LYGLCTCIAQASCSHPVPLRGGS*PPQLLH
Trigger: GTGGAGCAGCTGAGGAGGGCAGGAACCGCCTCTCAG...AGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GGAGGAGAGTATCCTTCAGAACACGAGTCTCGGGAGCCTGCCACCACACAATGCTGGGAATGCAGACACTaGCCTACCACACCTCTAAAT +
Preference number: 4 (lower is better)
Translates to: GGEYPSEHESREPATTQCWECRH*PTTPLN
Trigger: ATTTAGAGGTGTGGTAGGGCAGTGTCTGCATTCCCA...GCATTGTGTGGTGGCAGGCTCCCGAGACTCGTGTTCTGAAGGATACTCTCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp TTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTGTTGGGAGGCCAGAGCCCTaGCATCTGGGGGAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: FHGSSYFTLRFGWAALCVGRPEP*HLGEGR
Trigger: TCTCCCTTCCCCCAGATGGCAGGGCTCTGGCCTCCC...AACACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATAGACCCCGGAGCTGTTaGACAGAACATCAAAACAGG +
Preference number: 4 (lower is better)
Translates to: ASCLAWSRGHPFASAMSYRPRSC*TEHQNR
Trigger: CCTGTTTTGATGTTCTGTGCAACAGCTCCGGGGTCT...ATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp GTACTAGCAGTAAGTTTTCTGACCTTGCGCACAGCGCCAGGCAAAGTACAGTTATCCTGGCCGGCAAGGTaGTGCTCATCAGCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: VLAVSFLTLRTAPGKVQLSWPAR*CSSAAK
Trigger: CTTGGCAGCTGATGAGCAGCACCTTGCCGGCCAGGA...TAACTGTACTTTGCCTGGCGCTGTGCGCAAGGTCAGAAAACTTACTGCTAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp CTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGCTGTTGCACAGACAGAGGCCACCCTTTTaGTTCTGCAATGTCTTATTG +
Preference number: 4 (lower is better)
Translates to: LQGLLRISSHKTPELLHRQRPPF*FCNVLL
Trigger: CAATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTG...TCTGTGCAACAGCTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp ACCTTAAGCAATGCCGTCTTAAGACTTCTTTTTGAGACCTTAGGGTCTTCGCAGCAAGCCCCAGGCCGATaGCCCAGACAGAGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: TLSNAVLRLLFETLGSSQQAPGR*PRQSQL
Trigger: CAGCTGGCTCTGTCTGGGGCATCGGCCTGGGGCTTG...CTGCGAAGACCCTAAGGTCTCAAAAAGAAGTCTTAAGACGGCATTGCTTAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAACTCCCTCCTGTGTGCAGGTGTTGGGGCTaGTCCCTCTGCCTCACCCCA +
Preference number: 4 (lower is better)
Translates to: DVKARTYLKDDLAQLPPVCRCWG*SLCLTP
Trigger: TGGGGTGAGGCAGAGGGAGCAGCCCCAACACCTGCA...CACAGGAGGGAGTTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp ATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTCTGGCTGTAGATTCTaGACCATGCTGGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: MVYVHVLHRPLAATLFLPSGCRF*TMLGSG
Trigger: CCCTGAGCCCAGCATGGTGCAGAATCTACAGCCAGA...AGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS-3UTR GCA 90 bp GTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTAATGTTGGTTCGTTCAAAGTCCCATGGCGGGCTCTaGTTTCTTCTCGGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: VQTVSDSRLHWLMLVRSKSHGGL*FLLGWS
Trigger: GGACCAGCCGAGAAGAAAGCAGAGCCCGCCATGGGA...CTTTGAACGAACCAACATTAGCCAGTGGAGACGACTGTCTGAGACAGTTTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646146.1
CDS-3UTR CCA 90 bp AACCCCCAAGATGATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAAAATCCAGCCTGGGGCTaGAGCCGCCTGCCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: NPQDDVKARTYLKDDLAQNPAWG*SRLPEL
Trigger: CAGCTCGGGCAGGCGGCTCCAGCCCCAGGCTGGATT...TTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATCATCTTGGGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529750.5
CDS-3UTR CCA 90 bp CACATGCACCTTTGCCAAATCCTTCCCTCCAGTGGCTCAGATGCTTTTTCTATGATGGTGTCTCCGTCCTaGTTCTGCGGGGTTGGCGAG +
Preference number: 4 (lower is better)
Translates to: HMHLCQILPSSGSDAFSMMVSPS*FCGVGE
Trigger: CTCGCCAACCCCGCAGAACCAGGACGGAGACACCAT...CATAGAAAAAGCATCTGAGCCACTGGAGGGAAGGATTTGGCAAAGGTGCATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529432.5
ENST00000529750.5
CDS-3UTR CCA 90 bp TGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTAGCCCTTCTCCACCATaGTGTCTCCGTCCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: WSMYMYCTGLLQPPCSCLSPSPP*CLRPGS
Trigger: AGAACCAGGACGGAGACACCATGGTGGAGAAGGGCT...AAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR CCA 90 bp GTGCTCACCACTCACAGTGTTCTGTGGGTAGACCCTGCACCCCGGACGTGGCAATTCTCTGCTTGTAGGTaGGGCTTAACACATTATACC +
Preference number: 4 (lower is better)
Translates to: VLTTHSVLWVDPAPRTWQFSACR*GLTHYT
Trigger: GGTATAATGTGTTAAGCCCCACCTACAAGCAGAGAA...TTGCCACGTCCGGGGTGCAGGGTCTACCCACAGAACACTGTGAGTGGTGAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529432.5
ENST00000529750.5
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGGAGGCGCTCCGTGTCTaGAAGCTGCTTAAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALEALRV*KLLKEL
Trigger: AAGCTCTTTAAGCAGCTTCCAGACACGGAGCGCCTC...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp ATGGCCAGACAACTCGACTGCACTCGACCCGTGTTCTTTCCCATAGATGGCCCAAGTGCCAGAGCTCCTTaGGACACAGAGGCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: MARQLDCTRPVFFPIDGPSARAP*DTEAFQ
Trigger: TTGAAAAGCCTCTGTGTCCCAAGGAGCTCTGGCACT...TGGGCCATCTATGGGAAAGAACACGGGTCGAGTGCAGTCGAGTTGTCTGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGAGTCCTCGTCATCACTaGTCAGGCCCAATTCGTTCC +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALSPRHH*SGPIRS
Trigger: GGAACGAATTGGGCCTGACCAGTGATGACGAGGACT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGGACTGGCATCTGGCTTaGTCTCTATGCTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALDWHLA*SLCCSW
Trigger: CCAAGAGCAGCATAGAGACCAAGCCAGATGCCAGTC...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGCTGTGGACTGGCATCTaGCTTGGTCTCTATGCTGCT +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALLWTGI*LGLYAA
Trigger: AGCAGCATAGAGACCAAGCCAGATGCCAGTCCACAG...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTTTCTTGGGCAGCTGTaGACTGGCATCTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALFLGQL*TGIWLG
Trigger: ACCAAGCCAGATGCCAGTCCACAGCTGCCCAAGAAA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGCCTCACTGCTCCCTGTaGATGTTAGTGTGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALPHCSL*MLVCCW
Trigger: CCAACAGCACACTAACATCCACAGGGAGCAGTGAGG...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTCCATGAAATCCCGCTaGAAGGGCGAGTTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALSMKSR*KGELVK
Trigger: CTTCACCAACTCGCCCTTCCAGCGGGATTTCATGGA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp TATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGGACACGCTCTGCAGGTaGAAACCGTTGGGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: YMVYVHVLHRPLAATLFLDTLCR*KPLGVS
Trigger: GGACACCCCCAACGGTTTCCACCTGCAGAGCGTGTC...CAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTGGGGTAACCTTTCTTaGAGCCTTAGACCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALWGNLS*SLRPCQ
Trigger: CTGGCAGGGTCTAAGGCTCCAAGAAAGGTTACCCCA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GGGAATAGTTTTGGCTTCTGGCTGTGCCAAGGGGGAGATTTCCAGCAGTCTGCATGGGGTAACCTTTCTTaGAGCCTTAGACCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GNSFGFWLCQGGDFQQSAWGNLS*SLRPCQ
Trigger: CTGGCAGGGTCTAAGGCTCCAAGAAAGGTTACCCCA...TGCAGACTGCTGGAAATCTCCCCCTTGGCACAGCCAGAAGCCAAAACTATTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp ATGGCCAGACAACTCGACTGCACTCGACCCGTGTTCTTTCCCATAGATGGCCCAAGCGAGTCCTTCATCTaGTCAAGGAGCATCACTGAG +
Preference number: 4 (lower is better)
Translates to: MARQLDCTRPVFFPIDGPSESFI*SRSITE
Trigger: CTCAGTGATGCTCCTTGACCAGATGAAGGACTCGCT...TGGGCCATCTATGGGAAAGAACACGGGTCGAGTGCAGTCGAGTTGTCTGGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGCAGTCAACAAGGGTATaGAGAGGACACGGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALQSTRV*RGHGAG
Trigger: TCCTGCTCCGTGTCCTCTCCATACCCTTGTTGACTG...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS-3UTR CCA 90 bp ATGGCCAGACAACTCGACTGCACTCGACCCGTGTTCTTTCCCATAGATGGCCCATCTAAAAGCCAAGAATaGCCAGCAAGGGAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: MARQLDCTRPVFFPIDGPSKSQE*PAREGV
Trigger: CACCCCTTCCCTTGCTGGCCATTCTTGGCTTTTAGA...TGGGCCATCTATGGGAAAGAACACGGGTCGAGTGCAGTCGAGTTGTCTGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGAAGCCAAGGAGACCCTaGGAGGAGAGCACAAACCTA +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALKPRRP*EESTNL
Trigger: TAGGTTTGTGCTCTCCTCCCAGGGTCTCCTTGGCTT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456860.6
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGAGCTCTGAGCTGCTTTaGGGAAGGAAGCCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALSSELL*GRKPRR
Trigger: TCTCCTTGGCTTCCTTCCCCAAAGCAGCTCAGAGCT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456860.6
CDS-3UTR CCA 90 bp ATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCACGGTCTGGATCAAGTaGGCGGCCAACCCTAGGAGT +
Preference number: 4 (lower is better)
Translates to: IWSMYMYCTGLLQPPCSCTVWIK*AANPRS
Trigger: ACTCCTAGGGTTGGCCGCCCACTTGATCCAGACCGT...GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTACACTCAGTACGGTCTaGATCAAGTGGGCGGCCAAC +
Preference number: 4 (lower is better)
Translates to: WSMYMYCTGLLQPPCSCLTLSTV*IKWAAN
Trigger: GTTGGCCGCCCACTTGATCCAGACCGTACTGAGTGT...AAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GACTCTTTCATGAATCTCCACAAGCTCTGCCTGGAGCTGGTGGGACTCTTTTGGATTCCCAGCCCTTACTaGGTCCACACCCTACACAGG +
Preference number: 4 (lower is better)
Translates to: DSFMNLHKLCLELVGLFWIPSPY*VHTLHR
Trigger: CCTGTGTAGGGTGTGGACCCAGTAAGGGCTGGGAAT...CCAAAAGAGTCCCACCAGCTCCAGGCAGAGCTTGTGGAGATTCATGAAAGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TACTTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTCCTGCACCCCGGACGTaGCAAGGGCCTTCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: YFHGSSYFTLRFGWAALCPAPRT*QGPSLP
Trigger: AGGGAGAGAAGGCCCTTGCCACGTCCGGGGTGCAGG...ACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GGAGGAGAGTATCCTTCAGAACACGAGTCTCGGGAGCCTGCCACCACACAATGCACAGAGCTTAGTCAATaGAAAAGTCAGGACCCAGGC +
Preference number: 4 (lower is better)
Translates to: GGEYPSEHESREPATTQCTELSQ*KSQDPG
Trigger: GCCTGGGTCCTGACTTTTCCATTGACTAAGCTCTGT...GCATTGTGTGGTGGCAGGCTCCCGAGACTCGTGTTCTGAAGGATACTCTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATCACACCTCTAAATACTaGGAAGCTTCAGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: ASCLAWSRGHPFASAMSYHTSKY*EASASG
Trigger: CCCAGAGGCTGAAGCTTCCCAGTATTTAGAGGTGTG...ATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp ACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCCTCCGCCAGCTGCCTTGCCTaGAGCAGAGGCCACCCTTTT +
Preference number: 4 (lower is better)
Translates to: TMFFKPSDVGEIVSISSSASCLA*SRGHPF
Trigger: AAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGC...GGAGGAGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp TTCTATGTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTAATGTTGGTTCGTTGCAATCTCAGCACGTaGCACCCAAGCCCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: FYVQTVSDSRLHWLMLVRCNLST*HPSPRP
Trigger: CGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCA...ACGAACCAACATTAGCCAGTGGAGACGACTGTCTGAGACAGTTTGCACATAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCAATCTCAGCACGTaGCACCCAAGCCCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: FIWSMYMYCTGLLQPPCSCNLST*HPSPRP
Trigger: CGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCA...GGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GAGTATTCCAGTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGCCTCCGCCAGCGGCCTaGTTCGCGTCTCCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: EYSSEHWKVSKPCCLYHLPPPAA*FASPSG
Trigger: GCCAGAGGGAGACGCGAACCAGGCCGCTGGCGGAGG...CAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCACTGGAATACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CCA 90 bp GAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTTCCCTCCGCCAGCGGCCTaGTTCGCGTCTCCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: EHWKVSKPCCLYHLFHFFPPPAA*FASPSG
Trigger: GCCAGAGGGAGACGCGAACCAGGCCGCTGGCGGAGG...GAAGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CCA 90 bp ATTCCAGTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCGCCGGCGGCGAAGCGTaGGGGTCGACGAACTGGACC +
Preference number: 4 (lower is better)
Translates to: IPVNTGKLVSHAVFTICSAGGEA*GSTNWT
Trigger: GGTCCAGTTCGTCGACCCCCACGCTTCGCCGCCGGC...GGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCACTGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CCA 90 bp CACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTTCCTTGCCGGCGGCGAAGCGTaGGGGTCGACGAACTGGACC +
Preference number: 4 (lower is better)
Translates to: HWKVSKPCCLYHLFHFFLAGGEA*GSTNWT
Trigger: GGTCCAGTTCGTCGACCCCCACGCTTCGCCGCCGGC...AAGGAAGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CCA 90 bp GTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTGGCGCGGGGACGCGCTaGGTGTGGAGCAGTTGGACC +
Preference number: 4 (lower is better)
Translates to: VNTGKLVSHAVFTICSTSGAGTR*VWSSWT
Trigger: GGTCCAACTGCTCCACACCCAGCGCGTCCCCGCGCC...AGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTGCGGTTGGAGTTACTaGCAGTGTTGGCTCGCAGAA +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALCGWSY*QCWLAE
Trigger: TTCTGCGAGCCAACACTGCCAGTAACTCCAACCGCA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS-3UTR CCA 90 bp GGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACCTTGCGCACGTTCTCAGGACAAGCTaGCCAGCCAGTCTCCCATGG +
Preference number: 4 (lower is better)
Translates to: GQPCVFLGTSSKFSDLAHVLRTS*PASLPW
Trigger: CCATGGGAGACTGGCTGGCCAGCTTGTCCTGAGAAC...GTGCGCAAGGTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646146.1
3UTR CAA 72 bp GGATTGGGAATGGCTCCCGTAGGGCATAGATTTCACTaGGCCTTTTCCTGCCCAAACACATGCACCTTTGCC +
Preference number: 4 (lower is better)
Translates to: GLGMAPVGHRFH*AFSCPNTCTFA
Trigger: GGCAAAGGTGCATGTGTTTGGGCAGGAAAAGGCCAAGTGAAATCTATGCCCTACGGGAGCCATTCCCAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR CAA 72 bp GCTGAAGAACGACAATGTTCTTTAAGCCTTCAGATGTaGGGGAGATCGTCAGCATCAGCTCCTCCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: AEERQCSLSLQM*GRSSASAPPGR
Trigger: CCGGCCAGGAGGAGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTCTTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp AGTTTTGGCTTCTGGCTGTGCCAAGGGGGAGATTTCCAGCAGTCTGCACCATGCATGAGTAATCAACAATaGGGCGCTCCGTGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: SFGFWLCQGGDFQQSAPCMSNQQ*GAPCLE
Trigger: TTCCAGACACGGAGCGCCTCATTGTTGATTACTCAT...GCATGGTGCAGACTGCTGGAAATCTCCCCCTTGGCACAGCCAGAAGCCAAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGCAATCTTCTCCCCCATaGTGTTGTCAATGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALQSSPP*CCQWRA
Trigger: AGCTCGCCATTGACAACATCATGGGGGAGAAGATTG...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp ATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCTGTCGGAAGAGTCACTaGGCTCAGTGGGGATGTCCT +
Preference number: 4 (lower is better)
Translates to: IWSMYMYCTGLLQPPCSCCRKSH*AQWGCP
Trigger: AGGACATCCCCACTGAGCTCAGTGACTCTTCCGACA...GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp TGGGCTGTGGGCATAGGCACTCTTCACAGGGATTACATGAAACTGCATTTCCTCTGGTCTGTGTCTCCCTaGCAGTGGCAGTTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: WAVGIGTLHRDYMKLHFLWSVSP*QWQFWE
Trigger: CTCCCAAAACTGCCACTGTCAGGGAGACACAGACCA...GAGGAAATGCAGTTTCATGTAATCCCTGTGAAGAGTGCCTATGCCCACAGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACCTTGCGCACTGGTCTGTGTCTCCCTaGCAGTGGCAGTTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: GQPCVFLGTSSKFSDLAHWSVSP*QWQFWE
Trigger: CTCCCAAAACTGCCACTGTCAGGGAGACACAGACCA...GTGCGCAAGGTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp TATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGAGGGCACGTCGTGGGTaGGGACTTCGGCATCTATCA +
Preference number: 4 (lower is better)
Translates to: YMVYVHVLHRPLAATLFLRARRG*GLRHLS
Trigger: TGATAGATGCCGAAGTCCTCACCCACGACGTGCCCT...CAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp ACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCCAGGGCACGTCGTGGGTaGGGACTTCGGCATCTATCA +
Preference number: 4 (lower is better)
Translates to: TTMFFKPSDVGEIVSISSRARRG*GLRHLS
Trigger: TGATAGATGCCGAAGTCCTCACCCACGACGTGCCCT...GGAGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp TTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTCATCTGTGGGCGTGGTaGCCGGGCTCATCACCTCTT +
Preference number: 4 (lower is better)
Translates to: LYGLCTCIAQASCSHPVPHLWAW*PGSSPL
Trigger: AAGAGGTGATGAGCCCGGTCACCACGCCCACAGATG...AGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp AGAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCCATCTGTGGGCGTGGTaGCCGGGCTCATCACCTCTT +
Preference number: 4 (lower is better)
Translates to: RTTMFFKPSDVGEIVSISHLWAW*PGSSPL
Trigger: AAGAGGTGATGAGCCCGGTCACCACGCCCACAGATG...GCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp TTTCTGCTCTGCACTATGACAGCAAGCAGGGGCCTTAAAAGATGGCCTTCCAGGAACCTGCCACATGTTTaGTCCTGTGGCCCACATCCT +
Preference number: 4 (lower is better)
Translates to: FLLCTMTASRGLKRWPSRNLPHV*SCGPHP
Trigger: AGGATGTGGGCCACAGGATCAAACATGTGGCAGGTT...CCTGGAAGGCCATCTTTTAAGGCCCCTGCTTGCTGTCATAGTGCAGAGCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp TTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGACCCTGCCAGGCAGTaGGGGTCTGCGTGGTGTATT +
Preference number: 4 (lower is better)
Translates to: LYGLCTCIAQASCSHPVPDPARQ*GSAWCI
Trigger: AATACACCACGCAGACCCTCACTGCCTGGCAGGGTC...AGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp ATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTAGCATCCTCTCCATCTaGCACTCAGTACGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: MVYVHVLHRPLAATLFLPSILSI*HSVRSG
Trigger: TCCAGACCGTACTGAGTGTCAGATGGAGAGGATGCT...AGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGCCCCATTGCCAAGTCTaGGAAACTCAGGATTGGGAA +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALPHCQV*ETQDWE
Trigger: TTCCCAATCCTGAGTTTCTCAGACTTGGCAATGGGG...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp AACTCCCTGCGGCCAGGTCTGCTCTGTCACTTGACTCCCAACAAAGAACCCTTTGTCTGCTCTGTCACTTaGCTCCCAACAAAGAACCCT +
Preference number: 4 (lower is better)
Translates to: NSLRPGLLCHLTPNKEPFVCSVT*LPTKNP
Trigger: AGGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGAC...AAAGGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGACCTGGCCGCAGGGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GACTCTTTCATGAATCTCCACAAGCTCTGCCTGGAGCTGGTGGGACTCTTTTGGTCCTGGGAATGGTCCTaGGAGGTAAAGCAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: DSFMNLHKLCLELVGLFWSWEWS*EVKQKQ
Trigger: CTGCTTCTGCTTTACCTCTCAGGACCATTCCCAGGA...CCAAAAGAGTCCCACCAGCTCCAGGCAGAGCTTGTGGAGATTCATGAAAGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GGTTGGGGGAATGAAAGTCAAGGATGTCAAGGATGTCAAGTGGTGAATGGGATGGGCTCCAGGGCCTGTTaGGGATCTCCAGTCACAAGA +
Preference number: 4 (lower is better)
Translates to: GWGNESQGCQGCQVVNGMGSRAC*GSPVTR
Trigger: TCTTGTGACTGGAGATCCTCAACAGGCCCTGGAGCC...CATCCCATTCACCACTTGACATCCTTGACATCCTTGACTTTCATTCCCCCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACCTTGCGCACGAGTGGTCTGGCCCTTaGGTGCAGGGTAGGAAAATG +
Preference number: 4 (lower is better)
Translates to: GQPCVFLGTSSKFSDLAHEWSGP*VQGRKM
Trigger: CATTTTCCTACCCTGCACTCAAGGGCCAGACCACTC...GTGCGCAAGGTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTTCATGCGGCGCATCTTaGAGCGCCGGCGGCGAAGCG +
Preference number: 4 (lower is better)
Translates to: VNTGKLVSHAVFTICSTSSCGAS*SAGGEA
Trigger: CGCTTCGCCGCCGGCGCTTCAAGATGCGCCGCATGA...AGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR TCA 90 bp AGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAAGAATGGTCTCCCCTGGCTTaGCTGTGGATGGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: RVFAGITLAQHFPSKSQEWSPLA*LWMGGL
Trigger: GAGGCCACCCATCCACAGTCAAGCCAGGGGAGACCA...TTCTTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646146.1
CDS-3UTR GCA 90 bp ATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCAGCAGGCCGGCGTGCTaGGGTTGGAGTTACTGGCAG +
Preference number: 4 (lower is better)
Translates to: IYMVYVHVLHRPLAATLFSRPAC*GWSYWQ
Trigger: CTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCT...GAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR GCA 90 bp ACCTTAAGCAATGCCGTCTTAAGACTTCTTTTTGAGACCTTAGGGTCTTCGCAGAGCAGGCCGGCGTGCTaGGGTTGGAGTTACTGGCAG +
Preference number: 4 (lower is better)
Translates to: TLSNAVLRLLFETLGSSQSRPAC*GWSYWQ
Trigger: CTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCT...CTGCGAAGACCCTAAGGTCTCAAAAAGAAGTCTTAAGACGGCATTGCTTAAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529432.5
ENST00000529750.5
CDS-3UTR GCA 90 bp ATATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTGCGAGCAGGCCGGCGTaGTGCGGTTGGAGTTACTGG +
Preference number: 4 (lower is better)
Translates to: IFIWSMYMYCTGLLQPPCASRPA*CGWSYW
Trigger: CCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGC...ACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR GCA 90 bp AGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAAGAATCTCCGTCCTGGTTCTaGGGGGTTGGCGAGCGAGAC +
Preference number: 4 (lower is better)
Translates to: RVFAGITLAQHFPSKSQESPSWF*GVGERD
Trigger: GTCTCGCTCGCCAACCCCGCAGAACCAGGACGGAGA...TTCTTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529432.5
ENST00000529750.5
CDS-3UTR GCA 90 bp ATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCTCTCCGTCCTGGTTCTaGGGGGTTGGCGAGCGAGAC +
Preference number: 4 (lower is better)
Translates to: IYMVYVHVLHRPLAATLFSPSWF*GVGERD
Trigger: GTCTCGCTCGCCAACCCCGCAGAACCAGGACGGAGA...GAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR GCA 90 bp TACTTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTTCTCCGTCCTGGTTCTaGGGGGTTGGCGAGCGAGAC +
Preference number: 4 (lower is better)
Translates to: YFHGSSYFTLRFGWAALCSPSWF*GVGERD
Trigger: GTCTCGCTCGCCAACCCCGCAGAACCAGGACGGAGA...ACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000638157.1
CDS-3UTR GCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTCAAGGAGAGCATTCTaGCAGAGCCGGAACATCATC +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALSRRAF*QSRNII
Trigger: GATGATGTTCCGGCTCTGGCAGAATGCTCTCCTTGA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp GGGAATAGTTTTGGCTTCTGGCTGTGCCAAGGGGGAGATTTCCAGCAGTCTGCATCAAGGAGAGCATTCTaGCAGAGCCGGAACATCATC +
Preference number: 4 (lower is better)
Translates to: GNSFGFWLCQGGDFQQSASRRAF*QSRNII
Trigger: GATGATGTTCCGGCTCTGGCAGAATGCTCTCCTTGA...TGCAGACTGCTGGAAATCTCCCCCTTGGCACAGCCAGAAGCCAAAACTATTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGCTGGCTTGGTCTCTATaGTGCTCTTGGATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALLAWSL*CSWMSC
Trigger: ACAGCTCATCCAAGAGCAGCATAGAGACCAAGCCAG...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp ACAGTTATAGATCCAAATACAGATGGCCAGACAACTCGACTGCACTCGACCCGTAGACGGGGGCCTCACTaGTCCCTGTGGATGTTAGTG +
Preference number: 4 (lower is better)
Translates to: TVIDPNTDGQTTRLHSTRRRGPH*SLWMLV
Trigger: CACTAACATCCACAGGGAGCAGTGAGGCCCCCGTCT...ACGGGTCGAGTGCAGTCGAGTTGTCTGGCCATCTGTATTTGGATCTATAACTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp TATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCACTTCATTCACGTACTaGCGGCCACTCAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: YGLCTCIAQASCSHPVPATSFTY*RPLRSS
Trigger: TGAGGACCTGAGTGGCCGGCAGTACGTGAATGAAGT...GGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp GACTCTTTCATGAATCTCCACAAGCTCTGCCTGGAGCTGGTGGGACTCTTTTGGACTTCATTCACGTACTaGCGGCCACTCAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: DSFMNLHKLCLELVGLFWTSFTY*RPLRSS
Trigger: TGAGGACCTGAGTGGCCGGCAGTACGTGAATGAAGT...CCAAAAGAGTCCCACCAGCTCCAGGCAGAGCTTGTGGAGATTCATGAAAGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp TGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTACTTCATTCACGTACTaGCGGCCACTCAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: WSMYMYCTGLLQPPCSCLTSFTY*RPLRSS
Trigger: TGAGGACCTGAGTGGCCGGCAGTACGTGAATGAAGT...AAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp ACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCCTCAGAGAAGCGCCGCTaGTCCATGAAATCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: TTMFFKPSDVGEIVSISSSEKRR*SMKSRW
Trigger: CCAGCGGGATTTCATGGAGCAGCGGCGCTTCTCTGA...GGAGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp AGCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATCTCAGCCAAATAAGTaGTCTCCGTTTTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SQLPCLEQRPPFCFCNVLSQPNK*SPFWPA
Trigger: AGCTGGCCAAAACGGAGAGCACTTATTTGGCTGAGA...TAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGCGTCTGTGTGGAACCTaGCACATGTTTGATCCTGTG +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALRLCGT*HMFDPV
Trigger: CACAGGATCAAACATGTGGCAGGTTCCACACAGACG...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp ATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTCAGGCAGTGAGGGTCTaGGTGGTGTATTCCAACATC +
Preference number: 4 (lower is better)
Translates to: MVYVHVLHRPLAATLFLPQAVRV*VVYSNI
Trigger: GATGTTGGAATACACCACGCAGACCCTCACTGCCTG...AGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp TTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTTGGAGCCTTAGACCCTaGCAGGCAGTGAGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: LYGLCTCIAQASCSHPVPWSLRP*QAVRVC
Trigger: GCAGACCCTCACTGCCTGGCAGGGTCTAAGGCTCCA...AGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGCAGCCACCCTGTTCCTaGCTTGTCAATGATAGCGAT +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALQPPCS*LVNDSD
Trigger: ATCGCTATCATTGACAAGGCAGGAACAGGGTGGCTG...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp GGGAATAGTTTTGGCTTCTGGCTGTGCCAAGGGGGAGATTTCCAGCAGTCTGCACAGCCACCCTGTTCCTaGCTTGTCAATGATAGCGAT +
Preference number: 4 (lower is better)
Translates to: GNSFGFWLCQGGDFQQSAQPPCS*LVNDSD
Trigger: ATCGCTATCATTGACAAGGCAGGAACAGGGTGGCTG...TGCAGACTGCTGGAAATCTCCCCCTTGGCACAGCCAGAAGCCAAAACTATTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp ATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCCTGCCCTCCTCAGCTaGTCCACCATAAGAAAACGC +
Preference number: 4 (lower is better)
Translates to: IWSMYMYCTGLLQPPCSCPALLS*STIRKR
Trigger: GCGTTTTCTTATGGTGGAGCAGCTGAGGAGGGCAGG...GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGATACCAGCTCTGAGCTaGTTTGGGGAAGGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALIPALS*FGEGSQ
Trigger: TTGGCTTCCTTCCCCAAAGCAGCTCAGAGCTGGTAT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456860.6
CDS-3UTR GCA 90 bp TGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGGCAACCCATCTTGGTaGTCACCACTCACAGTGTTC +
Preference number: 4 (lower is better)
Translates to: WSMYMYCTGLLQPPCSCLGNPSW*SPLTVF
Trigger: GAACACTGTGAGTGGTGAGCACCAAGATGGGTTGCC...AAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp TTTCTGCTCTGCACTATGACAGCAAGCAGGGGCCTTAAAAGATGGCCTTCCAGGCAGCAGTCTGCACCATaGCTCCTTCTTTGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: FLLCTMTASRGLKRWPSRQQSAP*LLLWLR
Trigger: TCTGAGCCAAAGAAGGAGGCATGGTGCAGACTGCTG...CCTGGAAGGCCATCTTTTAAGGCCCCTGCTTGCTGTCATAGTGCAGAGCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GCAAATGAGGCTGGCAACCCATCTTGGTGCTCACCACTCACAGTGTTCTGTGGGTGGGAATGCAGACACTaGCCTACCACACCTCTAAAT +
Preference number: 4 (lower is better)
Translates to: ANEAGNPSWCSPLTVFCGWECRH*PTTPLN
Trigger: ATTTAGAGGTGTGGTAGGGCAGTGTCTGCATTCCCA...CCCACAGAACACTGTGAGTGGTGAGCACCAAGATGGGTTGCCAGCCTCATTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATTGGGAATGCAGACACTaGCCTACCACACCTCTAAAT +
Preference number: 4 (lower is better)
Translates to: ASCLAWSRGHPFASAMSYWECRH*PTTPLN
Trigger: ATTTAGAGGTGTGGTAGGGCAGTGTCTGCATTCCCA...ATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp TTGAGTTGGGGAAAAAGCACCATGGGTTTGGGAAGATGGTCTGGTCCATGCAGATGGGTCTCCTGGGAATaGAGACACTGCCCTACCACA +
Preference number: 4 (lower is better)
Translates to: LSWGKSTMGLGRWSGPCRWVSWE*RHCPTT
Trigger: TGTGGTAGGGCAGTGTCTGCATTCCCAGGAGACCCA...TCTGCATGGACCAGACCATCTTCCCAAACCCATGGTGCTTTTTCCCCAACTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp AGCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATGCAAGTTTCTGCTCTaGACTATGACAGCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: SQLPCLEQRPPFCFCNVLCKFLL*TMTASR
Trigger: CCTGCTTGCTGTCATAGTGCAGAGCAGAAACTTGCA...TAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCAAGCCCCAGGCCGATaGCCCAGACAGAGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVQAPGR*PRQSQL
Trigger: CAGCTGGCTCTGTCTGGGGCATCGGCCTGGGGCTTG...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GAGTATTCCAGTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGGAGCCGGCTTGGCGCTaGAGGGAGGTAGAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: EYSSEHWKVSKPCCLYHLEPAWR*REVESG
Trigger: CCCGCTCTCTACCTCCCTGCAGCGCCAAGCCGGCTC...CAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCACTGGAATACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533341.3
CDS-3UTR GCA 90 bp TCCAGTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACGGCCCCAGGGGGCGGTaGAGCAAACTCTCAGCGGTT +
Preference number: 4 (lower is better)
Translates to: SSEHWKVSKPCCLYHLFHGPRGR*SKLSAV
Trigger: AACCGCTGAGAGTTTGCTGCACCGCCCCCTGGGGCC...GTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCACTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR GCA 90 bp ACTGTAAGAGGTCAGGTACAGTGCTGTGACGATACAAAGATGAACATGATTGGTGGCCCCAGGGGGCGGTaGAGCAAACTCTCAGCGGTT +
Preference number: 4 (lower is better)
Translates to: TVRGQVQCCDDTKMNMIGGPRGR*SKLSAV
Trigger: AACCGCTGAGAGTTTGCTGCACCGCCCCCTGGGGCC...ACCAATCATGTTCATCTTTGTATCGTCACAGCACTGTACCTGACCTCTTACAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR GCA 90 bp GTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTGCTGCAGGAACTCCTTaGCGGGGGCCAAGACGGCGG +
Preference number: 4 (lower is better)
Translates to: VNTGKLVSHAVFTICSTSAAGTP*RGPRRR
Trigger: CCGCCGTCTTGGCCCCCGGCAAGGAGTTCCTGCAGC...AGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR GCA 90 bp TGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTTCCTTCCTGCTGCAGGAACTCCTTaGCGGGGGCCAAGACGGCGG +
Preference number: 4 (lower is better)
Translates to: WKVSKPCCLYHLFHFFLPAAGTP*RGPRRR
Trigger: CCGCCGTCTTGGCCCCCGGCAAGGAGTTCCTGCAGC...AGGAAGGAAGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGGCTGAAAGCTGGGCTTaGAGGCAAAGGACAGATTCT +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALAESWA*RQRTDS
Trigger: AGAATCTGTCCTTTGCCTCCAAGCCCAGCTTTCAGC...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456860.6
ENST00000529750.5
CDS-3UTR CCA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCTGGTTCTGCGGGGTTaGCGAGCGAGACCGCTTCCG +
Preference number: 4 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVLVLRG*RARPLP
Trigger: CGGAAGCGGTCTCGCTCGCCAACCCCGCAGAACCAG...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGAACTCTGGCTTTTCTTaGAATTCTTGCCGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALNSGFS*NSCRRS
Trigger: GGAGCGGCGGCAAGAATTCCAAGAAAAGCCAGAGTT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR CCA 90 bp TATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCGAGGCGCTCCGTGTCTaGAAGCTGCTTAAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: YGLCTCIAQASCSHPVPAEALRV*KLLKEL
Trigger: AAGCTCTTTAAGCAGCTTCCAGACACGGAGCGCCTC...GGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGAGTGCCAGAGCTCCTTaGGACACAGAGGCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALSARAP*DTEAFQ
Trigger: TTGAAAAGCCTCTGTGTCCCAAGGAGCTCTGGCACT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp CTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGCTGTTGCACAGATCTCTATGCTGCTCTTaGATGAGCTGTCATTCACTT +
Preference number: 4 (lower is better)
Translates to: LQGLLRISSHKTPELLHRSLCCS*MSCHSL
Trigger: AAGTGAATGACAGCTCATCCAAGAGCAGCATAGAGA...TCTGTGCAACAGCTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACCTTGCGCACTGGGCAGCTGTGGACTaGCATCTGGCTTGGTCTCTA +
Preference number: 4 (lower is better)
Translates to: GQPCVFLGTSSKFSDLAHWAAVD*HLAWSL
Trigger: TAGAGACCAAGCCAGATGCCAGTCCACAGCTGCCCA...GTGCGCAAGGTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp TGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTTTTCTTGGGCAGCTGTaGACTGGCATCTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: WSMYMYCTGLLQPPCSCLFLGQL*TGIWLG
Trigger: ACCAAGCCAGATGCCAGTCCACAGCTGCCCAAGAAA...AAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp ATCCCTACCAGTGTCCCTCACCCAAAGGCCTGGACAAGAACTGAACAAGGACCCACATGTTTGATCCTGTaGCCCACATCCTCATCTGTG +
Preference number: 4 (lower is better)
Translates to: IPTSVPHPKAWTRTEQGPTCLIL*PTSSSV
Trigger: CACAGATGAGGATGTGGGCCACAGGATCAAACATGT...GGGTCCTTGTTCAGTTCTTGTCCAGGCCTTTGGGTGAGGGACACTGGTAGGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAACTCCCTCCTGTGGACACGCTCTGCAGGTaGAAACCGTTGGGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: DVKARTYLKDDLAQLPPVDTLCR*KPLGVS
Trigger: GGACACCCCCAACGGTTTCCACCTGCAGAGCGTGTC...CACAGGAGGGAGTTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTCGTGGTACTTTTGTTaGGACTCTAAGAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALSWYFC*DSKSWA
Trigger: GGCCCAGCTCTTAGAGTCCCAACAAAAGTACCACGA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp AACTCCCTGCGGCCAGGTCTGCTCTGTCACTTGACTCCCAACAAAGAACCCTTTTCGTGGTACTTTTGTTaGGACTCTAAGAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: NSLRPGLLCHLTPNKEPFSWYFC*DSKSWA
Trigger: GGCCCAGCTCTTAGAGTCCCAACAAAAGTACCACGA...AAAGGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGACCTGGCCGCAGGGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGAGCGAGTCCTTCATCTaGTCAAGGAGCATCACTGAG +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALSESFI*SRSITE
Trigger: CTCAGTGATGCTCCTTGACCAGATGAAGGACTCGCT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp ACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCCACGGTCTGGATCAAGTaGGCGGCCAACCCTAGGAGT +
Preference number: 4 (lower is better)
Translates to: TTMFFKPSDVGEIVSISSTVWIK*AANPRS
Trigger: ACTCCTAGGGTTGGCCGCCCACTTGATCCAGACCGT...GGAGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TTGAGTTGGGGAAAAAGCACCATGGGTTTGGGAAGATGGTCTGGTCCATGCAGAATTCCCAGCCCTTACTaGGTCCACACCCTACACAGG +
Preference number: 4 (lower is better)
Translates to: LSWGKSTMGLGRWSGPCRIPSPY*VHTLHR
Trigger: CCTGTGTAGGGTGTGGACCCAGTAAGGGCTGGGAAT...TCTGCATGGACCAGACCATCTTCCCAAACCCATGGTGCTTTTTCCCCAACTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAACTCCCTCCTGTGCCCTCTCTCAAATCCTaGAGGGCCCAGCACACCCTG +
Preference number: 4 (lower is better)
Translates to: DVKARTYLKDDLAQLPPVPSLKS*RAQHTL
Trigger: CAGGGTGTGCTGGGCCCTCCAGGATTTGAGAGAGGG...CACAGGAGGGAGTTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TTCTATGTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTAATGTTGGTTCGTCCCTCTCTCAAATCCTaGAGGGCCCAGCACACCCTG +
Preference number: 4 (lower is better)
Translates to: FYVQTVSDSRLHWLMLVRPSLKS*RAQHTL
Trigger: CAGGGTGTGCTGGGCCCTCCAGGATTTGAGAGAGGG...ACGAACCAACATTAGCCAGTGGAGACGACTGTCTGAGACAGTTTGCACATAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp ATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTGACATCTGGGACATCTaGGGTTTCTTCTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: MVYVHVLHRPLAATLFLPDIWDI*GFFCPC
Trigger: ACAGGGGCAGAAGAAACCCCAGATGTCCCAGATGTC...AGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TTTCTGCTCTGCACTATGACAGCAAGCAGGGGCCTTAAAAGATGGCCTTCCAGGCCTTGGAGGATCACCTaGGCATGGACCTTCCTGTTT +
Preference number: 4 (lower is better)
Translates to: FLLCTMTASRGLKRWPSRPWRIT*AWTFLF
Trigger: AAACAGGAAGGTCCATGCCCAGGTGATCCTCCAAGG...CCTGGAAGGCCATCTTTTAAGGCCCCTGCTTGCTGTCATAGTGCAGAGCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp ATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCCATGCCTCCTTCTTTaGCTCAGAGCCCATGAGCCT +
Preference number: 4 (lower is better)
Translates to: IWSMYMYCTGLLQPPCSCPCLLL*LRAHEP
Trigger: AGGCTCATGGGCTCTGAGCCAAAGAAGGAGGCATGG...GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp AGTTTTGGCTTCTGGCTGTGCCAAGGGGGAGATTTCCAGCAGTCTGCACCATGCAATAGTTTTGGCTTCTaGCTGTGCCAAGGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: SFGFWLCQGGDFQQSAPCNSFGF*LCQGGD
Trigger: ATCTCCCCCTTGGCACAGCCAGAAGCCAAAACTATT...GCATGGTGCAGACTGCTGGAAATCTCCCCCTTGGCACAGCCAGAAGCCAAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GACTCTTTCATGAATCTCCACAAGCTCTGCCTGGAGCTGGTGGGACTCTTTTGGAGTCTTCCCAGCCTCTaGCCTAACCCCCAAGATGAT +
Preference number: 4 (lower is better)
Translates to: DSFMNLHKLCLELVGLFWSLPSL*PNPQDD
Trigger: ATCATCTTGGGGGTTAGGCCAGAGGCTGGGAAGACT...CCAAAAGAGTCCCACCAGCTCCAGGCAGAGCTTGTGGAGATTCATGAAAGAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATCAGAAAGTACCCTTCTaGGACCACAAGCATCCAGAA +
Preference number: 4 (lower is better)
Translates to: ASCLAWSRGHPFASAMSYQKVPF*DHKHPE
Trigger: TTCTGGATGCTTGTGGTCCCAGAAGGGTACTTTCTG...ATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GATTTGGCTGGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACCCAAGACTCCAGTCCTaGCTCCAGGGCCTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: DLAGQPCVFLGTSSKFSDPRLQS*LQGLLR
Trigger: CCTCAACAGGCCCTGGAGCCAGGACTGGAGTCTTGG...GTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCCAGCCAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp ACACATGCACCTTTGCCAAATCCTTCCCTCCAGTGGCTCAGATGCTTTTTCTATCCAAGACTCCAGTCCTaGCTCCAGGGCCTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: THAPLPNPSLQWLRCFFYPRLQS*LQGLLR
Trigger: CCTCAACAGGCCCTGGAGCCAGGACTGGAGTCTTGG...ATAGAAAAAGCATCTGAGCCACTGGAGGGAAGGATTTGGCAAAGGTGCATGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCGCCAGCTGCCTTGCCTaGAGCAGAGGCCACCCTTTT +
Preference number: 4 (lower is better)
Translates to: FIWSMYMYCTGLLQPPCSASCLA*SRGHPF
Trigger: AAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGC...GGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp ATGAGGTGTAGGGAGGCCAGAGCCCTGCCATATGTATTGCACAGGCCTCTTGCAAAAGCACCATGGGTTTaGGAAGATGGTCTGGTCCAT +
Preference number: 4 (lower is better)
Translates to: MRCREARALPYVLHRPLAKAPWV*EDGLVH
Trigger: ATGGACCAGACCATCTTCCCAAACCCATGGTGCTTT...TGCAAGAGGCCTGTGCAATACATATGGCAGGGCTCTGGCCTCCCTACACCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS-3UTR CCA 90 bp ACACATGCACCTTTGCCAAATCCTTCCCTCCAGTGGCTCAGATGCTTTTTCTATATCCAGGGGCCACTATaGCCTCTGACCCATCCCTCC +
Preference number: 4 (lower is better)
Translates to: THAPLPNPSLQWLRCFFYIQGPL*PLTHPS
Trigger: GGAGGGATGGGTCAGAGGCCATAGTGGCCCCTGGAT...ATAGAAAAAGCATCTGAGCCACTGGAGGGAAGGATTTGGCAAAGGTGCATGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTATCCAGGGGCCACTATaGCCTCTGACCCATCCCTCC +
Preference number: 4 (lower is better)
Translates to: ERQCSLSLQMLGRSSASAIQGPL*PLTHPS
Trigger: GGAGGGATGGGTCAGAGGCCATAGTGGCCCCTGGAT...AGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp CACTCGACCCGTGTTCTTTCCCATAGATGGCCCAGTGCAGGTGTTGGGGCTGCTCTTTACATTAAGATTTaGCTGGGCAGCCTTGTGTGT +
Preference number: 4 (lower is better)
Translates to: HSTRVLSHRWPSAGVGAALYIKI*LGSLVC
Trigger: ACACACAAGGCTGCCCAGCCAAATCTTAATGTAAAG...AGCAGCCCCAACACCTGCACTGGGCCATCTATGGGAAAGAACACGGGTCGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp TCCAGTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACGTTGGGGAGCCGGCTTaGCGCTGCAGGGAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: SSEHWKVSKPCCLYHLFHVGEPA*RCREVE
Trigger: CTCTACCTCCCTGCAGCGCCAAGCCGGCTCCCCAAC...GTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533341.3
CDS-3UTR CCA 90 bp CATGCTGTCTTTACCATTTGTTCCACTTCTTCCTTCCTAGGGTTTAAGGAGAAGTGGGGGTCGACGAACTaGACCAGACCGGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: HAVFTICSTSSFLGFKEKWGSTN*TRPGCP
Trigger: AGGGCAGCCCGGTCTGGTCCAGTTCGTCGACCCCCA...CTTCTCCTTAAACCCTAGGAAGGAAGAAGTGGAACAAATGGTAAAGACAGCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CCA 90 bp AAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTTCCTTCCTAGGGGGACGCGCTGGGTGTaGAGCAGTTGGACCACGGGG +
Preference number: 4 (lower is better)
Translates to: KVSKPCCLYHLFHFFLPRGTRWV*SSWTTG
Trigger: CCCCGTGGTCCAACTGCTCCACACCCAGCGCGTCCC...CCTAGGAAGGAAGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CCA 90 bp GGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACCTTGCGCACTGCGGTTGGAGTTACTaGCAGTGCTTTCTTCCCGCG +
Preference number: 4 (lower is better)
Translates to: GQPCVFLGTSSKFSDLAHCGWSY*QCFLPA
Trigger: CGCGGGAAGAAAGCACTGCCAGTAACTCCAACCGCA...GTGCGCAAGGTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS-3UTR CCA 90 bp ATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCCCAGCTGTCAACTGTaGGCTCCTGCACATAAGCTC +
Preference number: 4 (lower is better)
Translates to: IWSMYMYCTGLLQPPCSCPSCQL*APAHKL
Trigger: GAGCTTATGTGCAGGAGCCCACAGTTGACAGCTGGG...GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS-3UTR CCA 90 bp AGAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCGTCTCCCCGCGAGCCTaGCTTTGCAAAGAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: RTTMFFKPSDVGEIVSISVSPRA*LCKEES
Trigger: GCTCTCCTCTTTGCAAAGCCAGGCTCGCGGGGAGAC...GCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS-3UTR CCA 90 bp TTCTATGTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTAATGTTGGTTCGTCCGAGGTGGTCAGCGTaGTTCTCAGGACAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: FYVQTVSDSRLHWLMLVRPRWSA*FSGQAG
Trigger: GCCAGCTTGTCCTGAGAACCACGCTGACCACCTCGG...ACGAACCAACATTAGCCAGTGGAGACGACTGTCTGAGACAGTTTGCACATAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646146.1
CDS-3UTR TCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGATGAGTAATCAACAATaGGGCGCTCCGTGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALMSNQQ*GAPCLE
Trigger: TTCCAGACACGGAGCGCCTCATTGTTGATTACTCAT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGGGGCCCCAAACGAAGTaGAGAAGTGCTTTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALGPQTK*RSAFLN
Trigger: ATTCAGAAAAGCACTTCTTCACTTCGTTTGGGGCCC...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTTAGTGTGCTGTTGGTaGTGGATTTCTTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALLVCCW*WISWAA
Trigger: AGCTGCCCAAGAAATCCATCACCAACAGCACACTAA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp AACTCCCTGCGGCCAGGTCTGCTCTGTCACTTGACTCCCAACAAAGAACCCTTTTTAGTGTGCTGTTGGTaGTGGATTTCTTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: NSLRPGLLCHLTPNKEPFLVCCW*WISWAA
Trigger: AGCTGCCCAAGAAATCCATCACCAACAGCACACTAA...AAAGGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGACCTGGCCGCAGGGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TTTCTGCTCTGCACTATGACAGCAAGCAGGGGCCTTAAAAGATGGCCTTCCAGGCAATCTTCTCCCCCATaGTGTTGTCAATGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: FLLCTMTASRGLKRWPSRQSSPP*CCQWRA
Trigger: AGCTCGCCATTGACAACATCATGGGGGAGAAGATTG...CCTGGAAGGCCATCTTTTAAGGCCCCTGCTTGCTGTCATAGTGCAGAGCAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTGTCCTCATTGTCATTaGAGTCCAGTGAAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALCPHCH*SPVKGS
Trigger: ACTCCCCTTCACTGGACTTCAATGACAATGAGGACA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp TATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGTGTCGGAAGAGTCACTaGGCTCAGTGGGGATGTCCT +
Preference number: 4 (lower is better)
Translates to: YMVYVHVLHRPLAATLFLCRKSH*AQWGCP
Trigger: AGGACATCCCCACTGAGCTCAGTGACTCTTCCGACA...CAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GGTTGGGGGAATGAAAGTCAAGGATGTCAAGGATGTCAAGTGGTGAATGGGATGTGTCGGAAGAGTCACTaGGCTCAGTGGGGATGTCCT +
Preference number: 4 (lower is better)
Translates to: GWGNESQGCQGCQVVNGMCRKSH*AQWGCP
Trigger: AGGACATCCCCACTGAGCTCAGTGACTCTTCCGACA...CATCCCATTCACCACTTGACATCCTTGACATCCTTGACTTTCATTCCCCCAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp ACAGTTATAGATCCAAATACAGATGGCCAGACAACTCGACTGCACTCGACCCGTGGAAGGGCGAGTTGGTaGAGAGGAGGTCATAGAGCT +
Preference number: 4 (lower is better)
Translates to: TVIDPNTDGQTTRLHSTRGRASW*RGGHRA
Trigger: AGCTCTATGACCTCCTCTTCACCAACTCGCCCTTCC...ACGGGTCGAGTGCAGTCGAGTTGTCTGGCCATCTGTATTTGGATCTATAACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp CACATGCACCTTTGCCAAATCCTTCCCTCCAGTGGCTCAGATGCTTTTTCTATGGGAAGGGCGAGTTGGTaGAGAGGAGGTCATAGAGCT +
Preference number: 4 (lower is better)
Translates to: HMHLCQILPSSGSDAFSMGRASW*RGGHRA
Trigger: AGCTCTATGACCTCCTCTTCACCAACTCGCCCTTCC...CATAGAAAAAGCATCTGAGCCACTGGAGGGAAGGATTTGGCAAAGGTGCATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp ATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCATCACCTCTTCCAGGTaGGGGACTCGCAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: IYMVYVHVLHRPLAATLFITSSR*GTRRWA
Trigger: TGCCCACCTGCGAGTCCCTCACCTGGAAGAGGTGAT...GAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp ATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCAACCTGCCACATGTTTaGTCCTGTGGCCCACATCCT +
Preference number: 4 (lower is better)
Translates to: IWSMYMYCTGLLQPPCSCNLPHV*SCGPHP
Trigger: AGGATGTGGGCCACAGGATCAAACATGTGGCAGGTT...GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp ATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCGACCCTGCCAGGCAGTaGGGGTCTGCGTGGTGTATT +
Preference number: 4 (lower is better)
Translates to: IYMVYVHVLHRPLAATLFDPARQ*GSAWCI
Trigger: AATACACCACGCAGACCCTCACTGCCTGGCAGGGTC...GAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp TTTGGGAAGATGGTCTGGTCCATGCAGAGAGTGGTCTGGCCCTTGAGTGCAGGGCTTAAGACTTCTTTTTaGGACCTTAGGGTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: FGKMVWSMQRVVWPLSAGLKTSF*DLRVFA
Trigger: TGCGAAGACCCTAAGGTCTCAAAAAGAAGTCTTAAG...CCCTGCACTCAAGGGCCAGACCACTCTCTGCATGGACCAGACCATCTTCCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp AACTCCCTGCGGCCAGGTCTGCTCTGTCACTTGACTCCCAACAAAGAACCCTTTAAGGGGATTAGGGAATaGAGCACCTTAAGCAATGCC +
Preference number: 4 (lower is better)
Translates to: NSLRPGLLCHLTPNKEPFKGIRE*STLSNA
Trigger: GGCATTGCTTAAGGTGCTTCATTCCCTAATCCCCTT...AAAGGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGACCTGGCCGCAGGGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGACTGGCAGTGCTCCATaGCCATCCCAAAGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: YMVYVHVLHRPLAATLFLTGSAP*PSQSPV
Trigger: AACAGGGCTTTGGGATGGTCATGGAGCACTGCCAGT...CAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529432.5
CDS-3UTR TCA 90 bp GCATCTTCTAGAAGAAAACACAGAGGTGAAGAGGATTGGGGCCAACCTGCTGGAAGCATCCTCTCCATCTaGCACTCAGTACGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: ASSRRKHRGEEDWGQPAGSILSI*HSVRSG
Trigger: TCCAGACCGTACTGAGTGTCAGATGGAGAGGATGCT...TCCAGCAGGTTGGCCCCAATCCTCTTCACCTCTGTGTTTTCTTCTAGAAGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTTAGGCACTAAAAAGTaGCACTTCGCCCAGATCCAG +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALLGTKK*HFAQIQ
Trigger: CTGGATCTGGGCGAAGTGTCACTTTTTAGTGCCTAA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GGGAATAGTTTTGGCTTCTGGCTGTGCCAAGGGGGAGATTTCCAGCAGTCTGCAGCTATGACTCTTTCATaGATCTCCACAAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GNSFGFWLCQGGDFQQSAAMTLS*ISTSSA
Trigger: GGCAGAGCTTGTGGAGATTCATGAAAGAGTCATAGC...TGCAGACTGCTGGAAATCTCCCCCTTGGCACAGCCAGAAGCCAAAACTATTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCGTCTGCTCTGTCACTTaGCTCCCAACAAAGAACCCT +
Preference number: 4 (lower is better)
Translates to: YGLCTCIAQASCSHPVPAVCSVT*LPTKNP
Trigger: AGGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGAC...GGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TGGGCTGTGGGCATAGGCACTCTTCACAGGGATTACATGAAACTGCATTTCCTCGAGAGAGTCGCACCATaGTTAGCTTGTCTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: WAVGIGTLHRDYMKLHFLERVAP*LACLRP
Trigger: TGGCCTCAGACAAGCTAATCATGGTGCGACTCTCTC...GAGGAAATGCAGTTTCATGTAATCCCTGTGAAGAGTGCCTATGCCCACAGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGGTGACAGGAGGATACTaGAGCTCAGAGAGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: YMVYVHVLHRPLAATLFLVTGGY*SSERGS
Trigger: ACTCCCCCTCTCTGAGCTTCAGTATCCTCCTGTCAC...CAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp ACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCCGTGACAGGAGGATACTaGAGCTCAGAGAGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: TTMFFKPSDVGEIVSISSVTGGY*SSERGS
Trigger: ACTCCCCCTCTCTGAGCTTCAGTATCCTCCTGTCAC...GGAGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp ATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTCCTGGCAGAGCAATTaGGAAAGTCCACCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: MVYVHVLHRPLAATLFLPSWQSN*ESPPSL
Trigger: AAGACTGGGTGGACTTTCTCAATTGCTCTGCCAGGA...AGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GGAGGAGAGTATCCTTCAGAACACGAGTCTCGGGAGCCTGCCACCACACAATGCGAAGATGAGCTCCATTaGAAAGAATGTTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: GGEYPSEHESREPATTQCEDELH*KECSSP
Trigger: GGGAGAAGAACATTCTTTTCAATGGAGCTCATCTTC...GCATTGTGTGGTGGCAGGCTCCCGAGACTCGTGTTCTGAAGGATACTCTCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TTTCTGCTCTGCACTATGACAGCAAGCAGGGGCCTTAAAAGATGGCCTTCCAGGAAGAAAACACAGAGGTaGAGAGGATTGGGGCCAACC +
Preference number: 4 (lower is better)
Translates to: FLLCTMTASRGLKRWPSRKKTQR*RGLGPT
Trigger: GGTTGGCCCCAATCCTCTTCACCTCTGTGTTTTCTT...CCTGGAAGGCCATCTTTTAAGGCCCCTGCTTGCTGTCATAGTGCAGAGCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp TATTCCAGTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCTCATGCGGCGCATCTTaGAGCGCCGGCGGCGAAGCG +
Preference number: 4 (lower is better)
Translates to: YSSEHWKVSKPCCLYHLFSCGAS*SAGGEA
Trigger: CGCTTCGCCGCCGGCGCTTCAAGATGCGCCGCATGA...GAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCACTGGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR TCA 90 bp ATCACTGTAAGAGGTCAGGTACAGTGCTGTGACGATACAAAGATGAACATGATTCGTCGCTGGAGGGCGTaGTCTCGATGGACGGCAGCT +
Preference number: 4 (lower is better)
Translates to: ITVRGQVQCCDDTKMNMIRRWRA*SRWTAA
Trigger: AGCTGCCGTCCATCGAGATCACGCCCTCCAGCGACG...AATCATGTTCATCTTTGTATCGTCACAGCACTGTACCTGACCTCTTACAGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR TCA 90 bp GAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTTCCGTCGCTGGAGGGCGTaGTCTCGATGGACGGCAGCT +
Preference number: 4 (lower is better)
Translates to: EHWKVSKPCCLYHLFHFFRRWRA*SRWTAA
Trigger: AGCTGCCGTCCATCGAGATCACGCCCTCCAGCGACG...GAAGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR GCA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTAGCAGGCCGGCGTGCTaGGGTTGGAGTTACTGGCAG +
Preference number: 4 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVSRPAC*GWSYWQ
Trigger: CTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCT...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR GCA 90 bp GTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTAATGTTGGTTCGTTCAAAGTTTTCTTGGAATTCTTaGCGCCGCTCCGGCCGGACT +
Preference number: 4 (lower is better)
Translates to: VQTVSDSRLHWLMLVRSKFSWNS*RRSGRT
Trigger: AGTCCGGCCGGAGCGGCGGCAAGAATTCCAAGAAAA...CTTTGAACGAACCAACATTAGCCAGTGGAGACGACTGTCTGAGACAGTTTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529432.5
ENST00000529750.5
CDS-3UTR GCA 90 bp ATGGCCAGACAACTCGACTGCACTCGACCCGTGTTCTTTCCCATAGATGGCCCATCCGTGTCTGGAAGCTaGTTAAAGAGCTTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: MARQLDCTRPVFFPIDGPSVSGS*LKSFLK
Trigger: CTTCAGAAAGCTCTTTAAGCAGCTTCCAGACACGGA...TGGGCCATCTATGGGAAAGAACACGGGTCGAGTGCAGTCGAGTTGTCTGGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp TATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTCAAGGAGAGCATTCTaGCAGAGCCGGAACATCATC +
Preference number: 4 (lower is better)
Translates to: YGLCTCIAQASCSHPVPASRRAF*QSRNII
Trigger: GATGATGTTCCGGCTCTGGCAGAATGCTCTCCTTGA...GGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGGCTTGGTCTCTATGCTaGTCTTGGATGAGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALAWSLC*SWMSCH
Trigger: ATGACAGCTCATCCAAGAGCAGCATAGAGACCAAGC...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp TTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCAGACGGGGGCCTCACTaGTCCCTGTGGATGTTAGTG +
Preference number: 4 (lower is better)
Translates to: FIWSMYMYCTGLLQPPCSRRGPH*SLWMLV
Trigger: CACTAACATCCACAGGGAGCAGTGAGGCCCCCGTCT...GGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp GGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACCTTGCGCACACTTCATTCACGTACTaGCGGCCACTCAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: GQPCVFLGTSSKFSDLAHTSFTY*RPLRSS
Trigger: TGAGGACCTGAGTGGCCGGCAGTACGTGAATGAAGT...GTGCGCAAGGTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp TTGAGTTGGGGAAAAAGCACCATGGGTTTGGGAAGATGGTCTGGTCCATGCAGAACTTCATTCACGTACTaGCGGCCACTCAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LSWGKSTMGLGRWSGPCRTSFTY*RPLRSS
Trigger: TGAGGACCTGAGTGGCCGGCAGTACGTGAATGAAGT...TCTGCATGGACCAGACCATCTTCCCAAACCCATGGTGCTTTTTCCCCAACTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp TTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTTCAGAGAAGCGCCGCTaGTCCATGAAATCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LYGLCTCIAQASCSHPVPSEKRR*SMKSRW
Trigger: CCAGCGGGATTTCATGGAGCAGCGGCGCTTCTCTGA...AGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTCTCAGCCAAATAAGTaGTCTCCGTTTTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALSQPNK*SPFWPA
Trigger: AGCTGGCCAAAACGGAGAGCACTTATTTGGCTGAGA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp GGGAATAGTTTTGGCTTCTGGCTGTGCCAAGGGGGAGATTTCCAGCAGTCTGCATCTCAGCCAAATAAGTaGTCTCCGTTTTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GNSFGFWLCQGGDFQQSASQPNK*SPFWPA
Trigger: AGCTGGCCAAAACGGAGAGCACTTATTTGGCTGAGA...TGCAGACTGCTGGAAATCTCCCCCTTGGCACAGCCAGAAGCCAAAACTATTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp ATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTCGTCTGTGTGGAACCTaGCACATGTTTGATCCTGTG +
Preference number: 4 (lower is better)
Translates to: MVYVHVLHRPLAATLFLPRLCGT*HMFDPV
Trigger: CACAGGATCAAACATGTGGCAGGTTCCACACAGACG...AGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp TGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTCGTCTGTGTGGAACCTaGCACATGTTTGATCCTGTG +
Preference number: 4 (lower is better)
Translates to: WSMYMYCTGLLQPPCSCLRLCGT*HMFDPV
Trigger: CACAGGATCAAACATGTGGCAGGTTCCACACAGACG...AAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp GACCTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCGTGTCCTCCGGGATATaGCGCGTCTGTGTGGAACCT +
Preference number: 4 (lower is better)
Translates to: DLRVFAGITLAQHFPSKSVSSGI*RVCVEP
Trigger: AGGTTCCACACAGACGCGGCATATCCCGGAGGACAC...GCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp TTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTAGCTTGGACACGCTCTaGAGGTGGAAACCGTTGGGG +
Preference number: 4 (lower is better)
Translates to: LYGLCTCIAQASCSHPVPSLDTL*RWKPLG
Trigger: CCCCAACGGTTTCCACCTGCAGAGCGTGTCCAAGCT...AGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp TTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCAGCTTGGACACGCTCTaGAGGTGGAAACCGTTGGGG +
Preference number: 4 (lower is better)
Translates to: FIWSMYMYCTGLLQPPCSSLDTL*RWKPLG
Trigger: CCCCAACGGTTTCCACCTGCAGAGCGTGTCCAAGCT...GGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp AGAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCACCATAAGAAAACGCTaGTCCGGCCAGCACAGGGCG +
Preference number: 4 (lower is better)
Translates to: RTTMFFKPSDVGEIVSISTIRKR*SGQHRA
Trigger: CGCCCTGTGCTGGCCGGAGCAGCGTTTTCTTATGGT...GCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp AGTTTTGGCTTCTGGCTGTGCCAAGGGGGAGATTTCCAGCAGTCTGCACCATGCAAACACATGCACCTTTaGCAAATCCTTCCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SFGFWLCQGGDFQQSAPCKHMHL*QILPSS
Trigger: ACTGGAGGGAAGGATTTGGCAAAGGTGCATGTGTTT...GCATGGTGCAGACTGCTGGAAATCTCCCCCTTGGCACAGCCAGAAGCCAAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GACCTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCATCCACTCTAGCTCATaGCCTGGAGCCTCCTCACCC +
Preference number: 4 (lower is better)
Translates to: DLRVFAGITLAQHFPSKSIHSSS*PGASSP
Trigger: GGGTGAGGAGGCTCCAGGGCATGAGCTAGAGTGGAT...GCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATAGGACATTCCCTATGTaGACACATTGTCTAGTGGGT +
Preference number: 4 (lower is better)
Translates to: ASCLAWSRGHPFASAMSYRTFPM*THCLVG
Trigger: ACCCACTAGACAATGTGTGCACATAGGGAATGTCCT...ATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp CACTCGACCCGTGTTCTTTCCCATAGATGGCCCAGTGCAGGTGTTGGGGCTGCTACTCCAAGACTTATCTaGAAGGGTGAGTTAAGATGT +
Preference number: 4 (lower is better)
Translates to: HSTRVLSHRWPSAGVGAATPRLI*KGELRC
Trigger: ACATCTTAACTCACCCTTGCAGATAAGTCTTGGAGT...AGCAGCCCCAACACCTGCACTGGGCCATCTATGGGAAAGAACACGGGTCGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp TGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTAGGGCTGGCTTTGGCTaGCCTGAAGAGCTTAAAGAA +
Preference number: 4 (lower is better)
Translates to: WSMYMYCTGLLQPPCSCLRAGFG*PEELKE
Trigger: TTCTTTAAGCTCTTCAGGGCAGCCAAAGCCAGCCCT...AAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp ACCATTTGTTCCACTTCTTCCTTCCTAGGGTTTAAGGAGAAGAAAAGGGTCTCCGCTTGCTGGCGTCTTTaGCTTAGCGGGACTCGGCAG +
Preference number: 4 (lower is better)
Translates to: TICSTSSFLGFKEKKRVSACWRL*LSGTRQ
Trigger: CTGCCGAGTCCCGCTAAGGCAAAGACGCCAGCAAGC...GGAGACCCTTTTCTTCTCCTTAAACCCTAGGAAGGAAGAAGTGGAACAAATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR GCA 90 bp TCCAGTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTCGATGGACGGCAGCTaGAGGAACTCCTTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: SSEHWKVSKPCCLYHLFHSMDGS*RNSLPG
Trigger: CCCCGGCAAGGAGTTCCTGCAGCTGCCGTCCATCGA...GTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR GCA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTGGAGCTGCGTGGACTTaGTGCCCTTGCAGCTACCCC +
Preference number: 4 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVGAAWT*CPCSYP
Trigger: GGGGTAGCTGCAAGGGCAGCAAGTCCACGCAGCTCC...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS-3UTR GCA 90 bp ATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCGGCTCACTCTGGAGCTaGGTGGACTTGCTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: IYMVYVHVLHRPLAATLFGSLWS*VDLLPL
Trigger: CAAGGGCAGCAAGTCCACGCAGCTCCAGAGTGAGCC...GAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS-3UTR CCA 90 bp ATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCATGGTGTCTCCGTCCTaGTTCTGCGGGGTTGGCGAG +
Preference number: 4 (lower is better)
Translates to: IYMVYVHVLHRPLAATLFMVSPS*FCGVGE
Trigger: CTCGCCAACCCCGCAGAACCAGGACGGAGACACCAT...GAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR CCA 90 bp ACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCCTCCAGCCCTTCTCCACCATaGTGTCTCCGTCCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: TMFFKPSDVGEIVSISSSSPSPP*CLRPGS
Trigger: AGAACCAGGACGGAGACACCATGGTGGAGAAGGGCT...GGAGGAGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000638157.1
CDS-3UTR CCA 90 bp GGAGGAGAGTATCCTTCAGAACACGAGTCTCGGGAGCCTGCCACCACACAATGCTTCTCTGCTTGTAGGTaGGGCTTAACACATTATACC +
Preference number: 4 (lower is better)
Translates to: GGEYPSEHESREPATTQCFSACR*GLTHYT
Trigger: GGTATAATGTGTTAAGCCCCACCTACAAGCAGAGAA...GCATTGTGTGGTGGCAGGCTCCCGAGACTCGTGTTCTGAAGGATACTCTCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529432.5
ENST00000529750.5
CDS-3UTR CCA 90 bp ATCCCTACCAGTGTCCCTCACCCAAAGGCCTGGACAAGAACTGAACAAGGACCCGAATCAGTGCAAACTTaGATGGCATTGGGAATGAGG +
Preference number: 4 (lower is better)
Translates to: IPTSVPHPKAWTRTEQGPESVQT*MALGMR
Trigger: CCTCATTCCCAATGCCATCCAAGTTTGCACTGATTC...GGGTCCTTGTTCAGTTCTTGTCCAGGCCTTTGGGTGAGGGACACTGGTAGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TTGAGTTGGGGAAAAAGCACCATGGGTTTGGGAAGATGGTCTGGTCCATGCAGATTTCTTGGGCAGCTGTaGACTGGCATCTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: LSWGKSTMGLGRWSGPCRFLGQL*TGIWLG
Trigger: ACCAAGCCAGATGCCAGTCCACAGCTGCCCAAGAAA...TCTGCATGGACCAGACCATCTTCCCAAACCCATGGTGCTTTTTCCCCAACTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GTCCTGGCTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGCTGTTTCCTTTTTCCATGGATaGAAGATGATATCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: VLAPGPVEDLQSQDPGAVSFFHG*KMISEK
Trigger: CTTCTCTGATATCATCTTCCATCCATGGAAAAAGGA...AACAGCTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAGCCAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGAAGTGCTCTCCGTTTTaGCCAGCTCGCTCTCTAAAT +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALKCSPF*PARSLN
Trigger: ATTTAGAGAGCGAGCTGGCCAAAACGGAGAGCACTT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGACATGTTTGATCCTGTaGCCCACATCCTCATCTGTG +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALTCLIL*PTSSSV
Trigger: CACAGATGAGGATGTGGGCCACAGGATCAAACATGT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp ATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTCCCGCTCCTTCTCCCTaGTACATAGGCATTATCTCT +
Preference number: 4 (lower is better)
Translates to: MVYVHVLHRPLAATLFLPPAPSP*YIGIIS
Trigger: AGAGATAATGCCTATGTACCAGGGAGAAGGAGCGGG...AGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp ATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCTGCGGTTGGAGTTACTaGCAGTGCTCCATGACCATC +
Preference number: 4 (lower is better)
Translates to: IWSMYMYCTGLLQPPCSCCGWSY*QCSMTI
Trigger: GATGGTCATGGAGCACTGCCAGTAACTCCAACCGCA...GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529432.5
CDS-3UTR CCA 90 bp GACTCTTTCATGAATCTCCACAAGCTCTGCCTGGAGCTGGTGGGACTCTTTTGGCCTAGGAGTTTAGACTaGGCTCCCTTGATGCTTCTG +
Preference number: 4 (lower is better)
Translates to: DSFMNLHKLCLELVGLFWPRSLD*APLMLL
Trigger: CAGAAGCATCAAGGGAGCCCAGTCTAAACTCCTAGG...CCAAAAGAGTCCCACCAGCTCCAGGCAGAGCTTGTGGAGATTCATGAAAGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCACTCACAGTGTTCTGTaGGTAGACCCTGCACCCCGG +
Preference number: 4 (lower is better)
Translates to: FIWSMYMYCTGLLQPPCSTHSVL*VDPAPR
Trigger: CCGGGGTGCAGGGTCTACCCACAGAACACTGTGAGT...GGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp ACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCCTCCGCTGGCAACCCATCTTaGTGCTCACCACTCACAGTG +
Preference number: 4 (lower is better)
Translates to: TMFFKPSDVGEIVSISSSAGNPS*CSPLTV
Trigger: CACTGTGAGTGGTGAGCACCAAGATGGGTTGCCAGC...GGAGGAGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp ATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCCTTGGAGGATCACCTaGGCATGGACCTTCCTGTTT +
Preference number: 4 (lower is better)
Translates to: IWSMYMYCTGLLQPPCSCPWRIT*AWTFLF
Trigger: AAACAGGAAGGTCCATGCCCAGGTGATCCTCCAAGG...GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp CTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACAGAGAATAAAAGCACTGGCTaGAAGAAGTTACATAAGAAG +
Preference number: 4 (lower is better)
Translates to: LCNLSTWHPSPRPMPQTENKSTG*KKLHKK
Trigger: CTTCTTATGTAACTTCTTCCAGCCAGTGCTTTTATT...CTCTGTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp AGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATTGTCACACCTCTAAATACTaGGAAGCTTCAGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SCLAWSRGHPFASAMSYCHTSKY*EASASG
Trigger: CCCAGAGGCTGAAGCTTCCCAGTATTTAGAGGTGTG...ACAATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp ATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCAAACAGGGAGCTGGCTaGGCCCTTCACAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: IYMVYVHVLHRPLAATLFKQGAG*ALHSHG
Trigger: GCCATGGCTGTGAAGGGCCCAGCCAGCTCCCTGTTT...GAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTGTTAGCATCAGCTCCTCCTaGCCGGCAAGGTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: FHGSSYFTLRFGWAALCVSISSS*PARCCS
Trigger: TGAGCAGCACCTTGCCGGCCAGGAGGAGCTGATGCT...AACACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp TTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTGTTGCCAGCTGCCTTGCCTaGAGCAGAGGCCACCCTTTT +
Preference number: 4 (lower is better)
Translates to: FHGSSYFTLRFGWAALCVASCLA*SRGHPF
Trigger: AAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGC...AACACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGAAAGCACCATGGGTTTaGGAAGATGGTCTGGTCCAT +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALKAPWV*EDGLVH
Trigger: ATGGACCAGACCATCTTCCCAAACCCATGGTGCTTT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp CATGCTGTCTTTACCATTTGTTCCACTTCTTCCTTCCTAGGGTTTAAGGAGAAGTTCAGCAGACCAGGTTaGGGAGCCGGCTTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: HAVFTICSTSSFLGFKEKFSRPG*GAGLAL
Trigger: CAGCGCCAAGCCGGCTCCCCAACCTGGTCTGCTGAA...CTTCTCCTTAAACCCTAGGAAGGAAGAAGTGGAACAAATGGTAAAGACAGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533341.3
CDS-3UTR CCA 90 bp TTTACCATTTGTTCCACTTCTTCCTTCCTAGGGTTTAAGGAGAAGAAAAGGGTCGGTTCTCCATCATGTTaGCCGCCGGCATGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: FTICSTSSFLGFKEKKRVGSPSC*PPAWGP
Trigger: CGGCCCCCATGCCGGCGGCCAACATGATGGAGAACC...GACCCTTTTCTTCTCCTTAAACCCTAGGAAGGAAGAAGTGGAACAAATGGTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CCA 90 bp GAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTTCGGTTCTCCATCATGTTaGCCGCCGGCATGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: EHWKVSKPCCLYHLFHFFGSPSC*PPAWGP
Trigger: CGGCCCCCATGCCGGCGGCCAACATGATGGAGAACC...GAAGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CCA 90 bp TTTACCATTTGTTCCACTTCTTCCTTCCTAGGGTTTAAGGAGAAGAAAAGGGTCTGGGGGTCGACGAACTaGACCAGACCGGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: FTICSTSSFLGFKEKKRVWGSTN*TRPGCP
Trigger: AGGGCAGCCCGGTCTGGTCCAGTTCGTCGACCCCCA...GACCCTTTTCTTCTCCTTAAACCCTAGGAAGGAAGAAGTGGAACAAATGGTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CCA 90 bp AGTATTCCAGTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTGGGACGCGCTGGGTGTaGAGCAGTTGGACCACGGGG +
Preference number: 4 (lower is better)
Translates to: SIPVNTGKLVSHAVFTICGTRWV*SSWTTG
Trigger: CCCCGTGGTCCAACTGCTCCACACCCAGCGCGTCCC...ACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCACTGGAATACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CCA 90 bp ATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCCGGCGTGCTGCGGTTaGAGTTACTGGCAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: IYMVYVHVLHRPLAATLFPACCG*SYWQCW
Trigger: CCAACACTGCCAGTAACTCCAACCGCAGCACGCCGG...GAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS-3UTR CCA 90 bp GGTTGGGGGAATGAAAGTCAAGGATGTCAAGGATGTCAAGTGGTGAATGGGATGACAACTGGTCTCCCCTaGCTTGACTGTGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: GWGNESQGCQGCQVVNGMTTGLP*LDCGWV
Trigger: CACCCATCCACAGTCAAGCCAGGGGAGACCAGTTGT...CATCCCATTCACCACTTGACATCCTTGACATCCTTGACTTTCATTCCCCCAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646146.1
3UTR CAA 72 bp CCAGAACCCCCATTGCCAAGTCTGAGAAACTCAGGATaGGGAATGGCTCCCGTAGGGCATAGATTTCACTTG +
Preference number: 4 (lower is better)
Translates to: PEPPLPSLRNSG*GMAPVGHRFHL
Trigger: CAAGTGAAATCTATGCCCTACGGGAGCCATTCCCAATCCTGAGTTTCTCAGACTTGGCAATGGGGGTTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR CAA 72 bp CAGAACAACTCCCTGCGGCCAGGTCTGCTCTGTCACTaGACTCCCAACAAAGAACCCTTTTTAAGTCATCCC +
Preference number: 4 (lower is better)
Translates to: QNNSLRPGLLCH*TPNKEPFLSHP
Trigger: GGGATGACTTAAAAAGGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGACCTGGCCGCAGGGAGTTGTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
3UTR CAA 72 bp GAGCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTaGCTTCTGCAATGTCTTATTGTATTGAGAGAAGCA +
Preference number: 4 (lower is better)
Translates to: EPAALPGAEATL*LLQCLIVLREA
Trigger: TGCTTCTCTCAATACAATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
3UTR CAA 72 bp GGGAGCCACAAGCTATTGTTGGCAAAAATGGCTGTTTaGACTATGCAATCTCAGCACGTGGCACCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: GSHKLLLAKMAV*TMQSQHVAPKP
Trigger: GGGCTTGGGTGCCACGTGCTGAGATTGCATAGTCAAAACAGCCATTTTTGCCAACAATAGCTTGTGGCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGCAGTGCAGGAGAGCTTaGATCCTTTCATTAGTACAG +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALQCRRA*ILSLVQ
Trigger: CTGTACTAATGAAAGGATTCAAGCTCTCCTGCACTG...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456860.6
ENST00000529750.5
CDS-3UTR TCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTCTTTGGAGTGCACATaGGTAATCAACAATGAGGCG +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALSLECT*VINNEA
Trigger: CGCCTCATTGTTGATTACTCATGTGCACTCCAAAGA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp TATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCGGGCCCCAAACGAAGTaGAGAAGTGCTTTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: YGLCTCIAQASCSHPVPAGPQTK*RSAFLN
Trigger: ATTCAGAAAAGCACTTCTTCACTTCGTTTGGGGCCC...GGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp TTTCTGCTCTGCACTATGACAGCAAGCAGGGGCCTTAAAAGATGGCCTTCCAGGGGGCCCCAAACGAAGTaGAGAAGTGCTTTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: FLLCTMTASRGLKRWPSRGPQTK*RSAFLN
Trigger: ATTCAGAAAAGCACTTCTTCACTTCGTTTGGGGCCC...CCTGGAAGGCCATCTTTTAAGGCCCCTGCTTGCTGTCATAGTGCAGAGCAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GCTCAGATGCTTTTTCTATGTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTAGTATCCCATTGTGTTaGAGTCGTCGTCAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: AQMLFLCANCLRQSSPLASIPLC*SRRQGA
Trigger: TGCCCCCTGACGACGACTTCAACACAATGGGATACT...AGCCAGTGGAGACGACTGTCTGAGACAGTTTGCACATAGAAAAAGCATCTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp ACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCCAGTATCCCATTGTGTTaGAGTCGTCGTCAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: TTMFFKPSDVGEIVSISSSIPLC*SRRQGA
Trigger: TGCCCCCTGACGACGACTTCAACACAATGGGATACT...GGAGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp AGTTTTGGCTTCTGGCTGTGCCAAGGGGGAGATTTCCAGCAGTCTGCACCATGCTATGCTGCTCTTGGATaGGCTGTCATTCACTTCATT +
Preference number: 4 (lower is better)
Translates to: SFGFWLCQGGDFQQSAPCYAALG*AVIHFI
Trigger: AATGAAGTGAATGACAGCTCATCCAAGAGCAGCATA...GCATGGTGCAGACTGCTGGAAATCTCCCCCTTGGCACAGCCAGAAGCCAAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp AGCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATATGCTGCTCTTGGATaGGCTGTCATTCACTTCATT +
Preference number: 4 (lower is better)
Translates to: SQLPCLEQRPPFCFCNVLYAALG*AVIHFI
Trigger: AATGAAGTGAATGACAGCTCATCCAAGAGCAGCATA...TAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp TGGGCTGTGGGCATAGGCACTCTTCACAGGGATTACATGAAACTGCATTTCCTCCAATCTTCTCCCCCATaGTGTTGTCAATGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: WAVGIGTLHRDYMKLHFLQSSPP*CCQWRA
Trigger: AGCTCGCCATTGACAACATCATGGGGGAGAAGATTG...GAGGAAATGCAGTTTCATGTAATCCCTGTGAAGAGTGCCTATGCCCACAGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGGTCATTGAAGTCCAGTaGAGGGGAGTTCACAGGAGC +
Preference number: 4 (lower is better)
Translates to: YMVYVHVLHRPLAATLFLVIEVQ*RGVHRS
Trigger: GCTCCTGTGAACTCCCCTTCACTGGACTTCAATGAC...CAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp AGAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCGGAAGGGCGAGTTGGTaGAGAGGAGGTCATAGAGCT +
Preference number: 4 (lower is better)
Translates to: RTTMFFKPSDVGEIVSISGRASW*RGGHRA
Trigger: AGCTCTATGACCTCCTCTTCACCAACTCGCCCTTCC...GCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp TTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGGAAGGGCGAGTTGGTaGAGAGGAGGTCATAGAGCT +
Preference number: 4 (lower is better)
Translates to: LYGLCTCIAQASCSHPVPGRASW*RGGHRA
Trigger: AGCTCTATGACCTCCTCTTCACCAACTCGCCCTTCC...AGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp TTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTTGGTCTGTGTCTCCCTaGCAGTGGCAGTTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: LYGLCTCIAQASCSHPVPWSVSP*QWQFWE
Trigger: CTCCCAAAACTGCCACTGTCAGGGAGACACAGACCA...AGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GATTTGGCTGGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACTGGTCTGTGTCTCCCTaGCAGTGGCAGTTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: DLAGQPCVFLGTSSKFSDWSVSP*QWQFWE
Trigger: CTCCCAAAACTGCCACTGTCAGGGAGACACAGACCA...GTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCCAGCCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTGCTCTGTGGAGACCCTaGGTCGGCTCTTGTTCCGAG +
Preference number: 4 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVALWRP*VGSCSE
Trigger: CTCGGAACAAGAGCCGACTCAGGGTCTCCACAGAGC...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGAGAAGTTCTTCTCGATaGACGTTTTCACTAACCCCC +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALRSSSR*TFSLTP
Trigger: GGGGGTTAGTGAAAACGTTCATCGAGAAGAACTTCT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp AACCCCCAAGATGATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAACATCTGTGGGCGTGGTaGCCGGGCTCATCACCTCTT +
Preference number: 4 (lower is better)
Translates to: NPQDDVKARTYLKDDLAQHLWAW*PGSSPL
Trigger: AAGAGGTGATGAGCCCGGTCACCACGCCCACAGATG...TTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATCATCTTGGGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGGTCAAGGAGCATCACTaGGGATTTGATGATTTCCCT +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALVKEHH*GFDDFP
Trigger: AGGGAAATCATCAAATCCTCAGTGATGCTCCTTGAC...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GACTTGCCCAAGGCCACAGAGCTTAGTCAATGGAAAAGTCAGGACCCAGGCTCAGTCAAGGAGCATCACTaGGGATTTGATGATTTCCCT +
Preference number: 4 (lower is better)
Translates to: DLPKATELSQWKSQDPGSVKEHH*GFDDFP
Trigger: AGGGAAATCATCAAATCCTCAGTGATGCTCCTTGAC...TGAGCCTGGGTCCTGACTTTTCCATTGACTAAGCTCTGTGGCCTTGGGCAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCGACCTGATGCCGTTCTaGAGGTTGATGAGCGAGTCC +
Preference number: 4 (lower is better)
Translates to: FIWSMYMYCTGLLQPPCSDLMPF*RLMSES
Trigger: GGACTCGCTCATCAACCTTCAGAACGGCATCAGGTC...GGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp CTGTACTTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGGACCTGATGCCGTTCTaGAGGTTGATGAGCGAGTCC +
Preference number: 4 (lower is better)
Translates to: LYFHGSSYFTLRFGWAALDLMPF*RLMSES
Trigger: GGACTCGCTCATCAACCTTCAGAACGGCATCAGGTC...CAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAAGTACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GACCTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCAGGAAGGTGCAGGGGTaGTGGAGGAGAGTATCCTTC +
Preference number: 4 (lower is better)
Translates to: DLRVFAGITLAQHFPSKSRKVQG*WRRVSF
Trigger: GAAGGATACTCTCCTCCATCACCCCTGCACCTTCCT...GCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCAGGAAGGTGCAGGGGTaGTGGAGGAGAGTATCCTTC +
Preference number: 4 (lower is better)
Translates to: FIWSMYMYCTGLLQPPCSRKVQG*WRRVSF
Trigger: GAAGGATACTCTCCTCCATCACCCCTGCACCTTCCT...GGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp ATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTTAGGCACTAAAAAGTaGCACTTCGCCCAGATCCAG +
Preference number: 4 (lower is better)
Translates to: MVYVHVLHRPLAATLFLPLGTKK*HFAQIQ
Trigger: CTGGATCTGGGCGAAGTGTCACTTTTTAGTGCCTAA...AGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp ATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCCCCATTGCCAAGTCTaGGAAACTCAGGATTGGGAA +
Preference number: 4 (lower is better)
Translates to: IWSMYMYCTGLLQPPCSCPHCQV*ETQDWE
Trigger: TTCCCAATCCTGAGTTTCTCAGACTTGGCAATGGGG...GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGACAGTAGTTAGTGTATaGGGGATGATGAATGTGCCC +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALTVVSV*GMMNVP
Trigger: GGGCACATTCATCATCCCTCATACACTAACTACTGT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACCTTGCGCACTTCTGTCTTTTGGGCTaGTGTTCTGGGACATCTGGG +
Preference number: 4 (lower is better)
Translates to: GQPCVFLGTSSKFSDLAHFCLLG*CSGTSG
Trigger: CCCAGATGTCCCAGAACATCAGCCCAAAAGACAGAA...GTGCGCAAGGTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp CTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAAAGAGCCCATGAGCCTTaGTCCCTACCAGTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: LRVFAGITLAQHFPSKSQRAHEP*SLPVSL
Trigger: GAGGGACACTGGTAGGGATCAAGGCTCATGGGCTCT...TTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp AGCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTACCTACAAGAGATCCATaGTTCTTAAAGGACATTCCC +
Preference number: 4 (lower is better)
Translates to: SQLPCLEQRPPFCFCNVLPTRDP*FLKDIP
Trigger: GGGAATGTCCTTTAAGAATCATGGATCTCTTGTAGG...TAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp ATCCCTACCAGTGTCCCTCACCCAAAGGCCTGGACAAGAACTGAACAAGGACCCTCTTTCGCAAGCTATTaGCTAAGGGGGAAGAGATTT +
Preference number: 4 (lower is better)
Translates to: IPTSVPHPKAWTRTEQGPSFASY*LRGKRF
Trigger: AAATCTCTTCCCCCTTAGTCAATAGCTTGCGAAAGA...GGGTCCTTGTTCAGTTCTTGTCCAGGCCTTTGGGTGAGGGACACTGGTAGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp ATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTGATCTTGCTGGCCTaGGATGTAATCCTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: IWSMYMYCTGLLQPPCSCLILLA*DVILLS
Trigger: GGACAAGAGGATTACATCTCAGGCCAGCAAGATCAG...GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp CTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAATGGCCAGAGCAGAAGTaGGGTAACAAGGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LRVFAGITLAQHFPSKSQWPEQK*GNKAGQ
Trigger: CTGCCCAGCCTTGTTACCTCACTTCTGCTCTGGCCA...TTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACCTTGCGCACCCTTGGAGTCTAGGTTaGGTTGGGGAAAAAGCACCA +
Preference number: 4 (lower is better)
Translates to: GQPCVFLGTSSKFSDLAHPWSLG*VGEKAP
Trigger: TGGTGCTTTTTCCCCAACTCAACCTAGACTCCAAGG...GTGCGCAAGGTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp ACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCCACTGTCCCCACACGATaGAAACAACTGGTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: TTMFFKPSDVGEIVSISSTVPTR*KQLVSP
Trigger: AGGGGAGACCAGTTGTTTTCATCGTGTGGGGACAGT...GGAGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646146.1
CDS-3UTR GCA 90 bp CTGTACTTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTTTTCTTGGAATTCTTaGCGCCGCTCCGGCCGGACT +
Preference number: 4 (lower is better)
Translates to: LYFHGSSYFTLRFGWAALFSWNS*RRSGRT
Trigger: AGTCCGGCCGGAGCGGCGGCAAGAATTCCAAGAAAA...CAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAAGTACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000638157.1
CDS-3UTR GCA 90 bp AGAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTTTTCTTGGAATTCTTaGCGCCGCTCCGGCCGGACT +
Preference number: 4 (lower is better)
Translates to: RTTMFFKPSDVGEIVSISFSWNS*RRSGRT
Trigger: AGTCCGGCCGGAGCGGCGGCAAGAATTCCAAGAAAA...GCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000638157.1
CDS-3UTR GCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTCCGTGTCTGGAAGCTaGTTAAAGAGCTTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALSVSGS*LKSFLK
Trigger: CTTCAGAAAGCTCTTTAAGCAGCTTCCAGACACGGA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp TATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCGCTTGGTCTCTATGCTaGTCTTGGATGAGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: YGLCTCIAQASCSHPVPAAWSLC*SWMSCH
Trigger: ATGACAGCTCATCCAAGAGCAGCATAGAGACCAAGC...GGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp TTTCTGCTCTGCACTATGACAGCAAGCAGGGGCCTTAAAAGATGGCCTTCCAGGGCTTGGTCTCTATGCTaGTCTTGGATGAGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: FLLCTMTASRGLKRWPSRAWSLC*SWMSCH
Trigger: ATGACAGCTCATCCAAGAGCAGCATAGAGACCAAGC...CCTGGAAGGCCATCTTTTAAGGCCCCTGCTTGCTGTCATAGTGCAGAGCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp AGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAAGAAAGACGGGGGCCTCACTaGTCCCTGTGGATGTTAGTG +
Preference number: 4 (lower is better)
Translates to: RVFAGITLAQHFPSKSQERRGPH*SLWMLV
Trigger: CACTAACATCCACAGGGAGCAGTGAGGCCCCCGTCT...TTCTTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp TACTTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTTCAGAGAAGCGCCGCTaGTCCATGAAATCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: YFHGSSYFTLRFGWAALCSEKRR*SMKSRW
Trigger: CCAGCGGGATTTCATGGAGCAGCGGCGCTTCTCTGA...ACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp ATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTCTCAGCCAAATAAGTaGTCTCCGTTTTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: MVYVHVLHRPLAATLFLPSQPNK*SPFWPA
Trigger: AGCTGGCCAAAACGGAGAGCACTTATTTGGCTGAGA...AGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp TATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCAGGCAGTGAGGGTCTaGGTGGTGTATTCCAACATC +
Preference number: 4 (lower is better)
Translates to: YMVYVHVLHRPLAATLFLQAVRV*VVYSNI
Trigger: GATGTTGGAATACACCACGCAGACCCTCACTGCCTG...CAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp AACCCCCAAGATGATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAATGGAGCCTTAGACCCTaGCAGGCAGTGAGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: NPQDDVKARTYLKDDLAQWSLRP*QAVRVC
Trigger: GCAGACCCTCACTGCCTGGCAGGGTCTAAGGCTCCA...TTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATCATCTTGGGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTTGGAGCCTTAGACCCTaGCAGGCAGTGAGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVWSLRP*QAVRVC
Trigger: GCAGACCCTCACTGCCTGGCAGGGTCTAAGGCTCCA...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp GCATCTTCTAGAAGAAAACACAGAGGTGAAGAGGATTGGGGCCAACCTGCTGGACAGCCACCCTGTTCCTaGCTTGTCAATGATAGCGAT +
Preference number: 4 (lower is better)
Translates to: ASSRRKHRGEEDWGQPAGQPPCS*LVNDSD
Trigger: ATCGCTATCATTGACAAGGCAGGAACAGGGTGGCTG...TCCAGCAGGTTGGCCCCAATCCTCTTCACCTCTGTGTTTTCTTCTAGAAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTCTATGTACATGTATTaGACAGGCCTCTTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALSMYMY*TGLLQP
Trigger: TGGCTGCAAGAGGCCTGTGCAATACATGTACATAGA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp GAACCCTTTTTAAGTCATCCCAAAGGTCCCACCGTGGCACCTTTAATAATTAAACTGAGAGGCGGTTCCTaGCCTCCTCAGCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: EPFLSHPKGPTVAPLIIKLRGGS*PPQLLH
Trigger: GTGGAGCAGCTGAGGAGGGCAGGAACCGCCTCTCAG...TTTAATTATTAAAGGTGCCACGGTGGGACCTTTGGGATGACTTAAAAAGGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp ATATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTCGAGTCTCGGGAGCCTaGCACCACACAATGCAGCCT +
Preference number: 4 (lower is better)
Translates to: IFIWSMYMYCTGLLQPPCRVSGA*HHTMQP
Trigger: AGGCTGCATTGTGTGGTGGCAGGCTCCCGAGACTCG...ACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GAACCCTTTTTAAGTCATCCCAAAGGTCCCACCGTGGCACCTTTAATAATTAAATCTGTGGGTAGACCCTaGACCCCGGACGTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: EPFLSHPKGPTVAPLIIKSVGRP*TPDVAR
Trigger: CCTTGCCACGTCCGGGGTGCAGGGTCTACCCACAGA...TTTAATTATTAAAGGTGCCACGGTGGGACCTTTGGGATGACTTAAAAAGGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATCTCCAGTGGCTCAGATaGTTTTTCTATGTGCAAACT +
Preference number: 4 (lower is better)
Translates to: ASCLAWSRGHPFASAMSYLQWLR*FFYVQT
Trigger: AGTTTGCACATAGAAAAAGCATCTGAGCCACTGGAG...ATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp ATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTCACTTGGCCTTTTCCTaGCCAAACACATGCACCTTT +
Preference number: 4 (lower is better)
Translates to: MVYVHVLHRPLAATLFLPHLAFS*PNTCTF
Trigger: AAAGGTGCATGTGTTTGGGCAGGAAAAGGCCAAGTG...AGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTAATGTTGGTTCGTTCAAAGCAGCAGTCTGCACCATaGCTCCTTCTTTGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: VQTVSDSRLHWLMLVRSKQQSAP*LLLWLR
Trigger: TCTGAGCCAAAGAAGGAGGCATGGTGCAGACTGCTG...CTTTGAACGAACCAACATTAGCCAGTGGAGACGACTGTCTGAGACAGTTTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp TTCTATGTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTAATGTTGGTTCGTTGGGTCTCCTGGGAATaGAGACACTGCCCTACCACA +
Preference number: 4 (lower is better)
Translates to: FYVQTVSDSRLHWLMLVRWVSWE*RHCPTT
Trigger: TGTGGTAGGGCAGTGTCTGCATTCCCAGGAGACCCA...ACGAACCAACATTAGCCAGTGGAGACGACTGTCTGAGACAGTTTGCACATAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp AACCCCCAAGATGATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAATCCTGGCCGGCAAGGTaGTGCTCATCAGCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: NPQDDVKARTYLKDDLAQSWPAR*CSSAAK
Trigger: CTTGGCAGCTGATGAGCAGCACCTTGCCGGCCAGGA...TTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATCATCTTGGGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp TTTCTGCTCTGCACTATGACAGCAAGCAGGGGCCTTAAAAGATGGCCTTCCAGGAATCATCATCGTGGCTaGTCTGCTGACTGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: FLLCTMTASRGLKRWPSRNHHRG*SADCSV
Trigger: AACAGAGCAGTCAGCAGAGCAGCCACGATGATGATT...CCTGGAAGGCCATCTTTTAAGGCCCCTGCTTGCTGTCATAGTGCAGAGCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS-3UTR GCA 90 bp ATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCGTAGATTCTGCACCATaGTGGGCTCAGGGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: IYMVYVHVLHRPLAATLFVDSAP*WAQGRA
Trigger: AGCCCTCCCCTGAGCCCAGCATGGTGCAGAATCTAC...GAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS-3UTR CCA 90 bp TTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCAGCCCTTCTCCACCATaGTGTCTCCGTCCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: FIWSMYMYCTGLLQPPCSSPSPP*CLRPGS
Trigger: AGAACCAGGACGGAGACACCATGGTGGAGAAGGGCT...GGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGGAATCAGTGCAAACTTaGATGGCATTGGGAATGAGG +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALESVQT*MALGMR
Trigger: CCTCATTCCCAATGCCATCCAAGTTTGCACTGATTC...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp ATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCAGTGCCAGAGCTCCTTaGGACACAGAGGCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: IWSMYMYCTGLLQPPCSCSARAP*DTEAFQ
Trigger: TTGAAAAGCCTCTGTGTCCCAAGGAGCTCTGGCACT...GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GTACTAGCAGTAAGTTTTCTGACCTTGCGCACAGCGCCAGGCAAAGTACAGTTAAGTCCTCGTCATCACTaGTCAGGCCCAATTCGTTCC +
Preference number: 4 (lower is better)
Translates to: VLAVSFLTLRTAPGKVQLSPRHH*SGPIRS
Trigger: GGAACGAATTGGGCCTGACCAGTGATGACGAGGACT...TAACTGTACTTTGCCTGGCGCTGTGCGCAAGGTCAGAAAACTTACTGCTAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp ATGGCCAGACAACTCGACTGCACTCGACCCGTGTTCTTTCCCATAGATGGCCCATCTCTATGCTGCTCTTaGATGAGCTGTCATTCACTT +
Preference number: 4 (lower is better)
Translates to: MARQLDCTRPVFFPIDGPSLCCS*MSCHSL
Trigger: AAGTGAATGACAGCTCATCCAAGAGCAGCATAGAGA...TGGGCCATCTATGGGAAAGAACACGGGTCGAGTGCAGTCGAGTTGTCTGGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp AGTTTTGGCTTCTGGCTGTGCCAAGGGGGAGATTTCCAGCAGTCTGCACCATGCTCTCTATGCTGCTCTTaGATGAGCTGTCATTCACTT +
Preference number: 4 (lower is better)
Translates to: SFGFWLCQGGDFQQSAPCSLCCS*MSCHSL
Trigger: AAGTGAATGACAGCTCATCCAAGAGCAGCATAGAGA...GCATGGTGCAGACTGCTGGAAATCTCCCCCTTGGCACAGCCAGAAGCCAAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GGTTGGGGGAATGAAAGTCAAGGATGTCAAGGATGTCAAGTGGTGAATGGGATGCTGTGGACTGGCATCTaGCTTGGTCTCTATGCTGCT +
Preference number: 4 (lower is better)
Translates to: GWGNESQGCQGCQVVNGMLWTGI*LGLYAA
Trigger: AGCAGCATAGAGACCAAGCCAGATGCCAGTCCACAG...CATCCCATTCACCACTTGACATCCTTGACATCCTTGACTTTCATTCCCCCAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp TATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGTTTCTTGGGCAGCTGTaGACTGGCATCTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: YMVYVHVLHRPLAATLFLFLGQL*TGIWLG
Trigger: ACCAAGCCAGATGCCAGTCCACAGCTGCCCAAGAAA...CAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp ATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTAAGTGCTCTCCGTTTTaGCCAGCTCGCTCTCTAAAT +
Preference number: 4 (lower is better)
Translates to: MVYVHVLHRPLAATLFLPKCSPF*PARSLN
Trigger: ATTTAGAGAGCGAGCTGGCCAAAACGGAGAGCACTT...AGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp AGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATTGTACATGTTTGATCCTGTaGCCCACATCCTCATCTGTG +
Preference number: 4 (lower is better)
Translates to: SCLAWSRGHPFASAMSYCTCLIL*PTSSSV
Trigger: CACAGATGAGGATGTGGGCCACAGGATCAAACATGT...ACAATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp AGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAAGAAGCAGGTGGAAACCGTTaGGGGTGTCCTCCGGGATAT +
Preference number: 4 (lower is better)
Translates to: RVFAGITLAQHFPSKSQEAGGNR*GCPPGY
Trigger: ATATCCCGGAGGACACCCCCAACGGTTTCCACCTGC...TTCTTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTGGAGCTCAGTATCGTaGTACTTTTGTTGGGACTCT +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALWSSVS*YFCWDS
Trigger: AGAGTCCCAACAAAAGTACCACGATACTGAGCTCCA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp ATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTAGTTGTAACCCATaGCATAGGTCTGTTCGAGGG +
Preference number: 4 (lower is better)
Translates to: MVYVHVLHRPLAATLFLPCSCNP*HRSVRG
Trigger: CCCTCGAACAGACCTATGCCATGGGTTACAACTACA...AGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS-3UTR CCA 90 bp ACCTTAAGCAATGCCGTCTTAAGACTTCTTTTTGAGACCTTAGGGTCTTCGCAGACGGTCTGGATCAAGTaGGCGGCCAACCCTAGGAGT +
Preference number: 4 (lower is better)
Translates to: TLSNAVLRLLFETLGSSQTVWIK*AANPRS
Trigger: ACTCCTAGGGTTGGCCGCCCACTTGATCCAGACCGT...CTGCGAAGACCCTAAGGTCTCAAAAAGAAGTCTTAAGACGGCATTGCTTAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp ACACATGCACCTTTGCCAAATCCTTCCCTCCAGTGGCTCAGATGCTTTTTCTATACACTCAGTACGGTCTaGATCAAGTGGGCGGCCAAC +
Preference number: 4 (lower is better)
Translates to: THAPLPNPSLQWLRCFFYTLSTV*IKWAAN
Trigger: GTTGGCCGCCCACTTGATCCAGACCGTACTGAGTGT...ATAGAAAAAGCATCTGAGCCACTGGAGGGAAGGATTTGGCAAAGGTGCATGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp AACTCCCTGCGGCCAGGTCTGCTCTGTCACTTGACTCCCAACAAAGAACCCTTTCAGAGAGAAAGCGGGTaGGAAAGTAAGAAATTCCCA +
Preference number: 4 (lower is better)
Translates to: NSLRPGLLCHLTPNKEPFQRESG*ESKKFP
Trigger: TGGGAATTTCTTACTTTCCCACCCGCTTTCTCTCTG...AAAGGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGACCTGGCCGCAGGGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCTGGCAACCCATCTTaGTGCTCACCACTCACAGTG +
Preference number: 4 (lower is better)
Translates to: LYGLCTCIAQASCSHPVPAGNPS*CSPLTV
Trigger: CACTGTGAGTGGTGAGCACCAAGATGGGTTGCCAGC...AGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TTCTATGTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTAATGTTGGTTCGTGCTGGCAACCCATCTTaGTGCTCACCACTCACAGTG +
Preference number: 4 (lower is better)
Translates to: FYVQTVSDSRLHWLMLVRAGNPS*CSPLTV
Trigger: CACTGTGAGTGGTGAGCACCAAGATGGGTTGCCAGC...ACGAACCAACATTAGCCAGTGGAGACGACTGTCTGAGACAGTTTGCACATAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GCTCAGATGCTTTTTCTATGTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTAGCTCTGCCTGGAGCTaGTGGGACTCTTTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: AQMLFLCANCLRQSSPLASSAWS*WDSFGH
Trigger: ATGACCAAAAGAGTCCCACCAGCTCCAGGCAGAGCT...AGCCAGTGGAGACGACTGTCTGAGACAGTTTGCACATAGAAAAAGCATCTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GTACTAGCAGTAAGTTTTCTGACCTTGCGCACAGCGCCAGGCAAAGTACAGTTAGACATCTGGGACATCTaGGGTTTCTTCTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: VLAVSFLTLRTAPGKVQLDIWDI*GFFCPC
Trigger: ACAGGGGCAGAAGAAACCCCAGATGTCCCAGATGTC...TAACTGTACTTTGCCTGGCGCTGTGCGCAAGGTCAGAAAACTTACTGCTAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCCATGCCTCCTTCTTTaGCTCAGAGCCCATGAGCCT +
Preference number: 4 (lower is better)
Translates to: ERQCSLSLQMLGRSSASAPCLLL*LRAHEP
Trigger: AGGCTCATGGGCTCTGAGCCAAAGAAGGAGGCATGG...AGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp ATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCAACCTGCTGGAGGTTaGGGGAATGAAAGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: IWSMYMYCTGLLQPPCSCQPAGG*GNESQG
Trigger: TCCTTGACTTTCATTCCCCCAACCTCCAGCAGGTTG...GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TTTCTGCTCTGCACTATGACAGCAAGCAGGGGCCTTAAAAGATGGCCTTCCAGGCAGGGTAGGAAAATGTaGGGAGCCACAAGCTATTGT +
Preference number: 4 (lower is better)
Translates to: FLLCTMTASRGLKRWPSRQGRKM*GATSYC
Trigger: ACAATAGCTTGTGGCTCCCCACATTTTCCTACCCTG...CCTGGAAGGCCATCTTTTAAGGCCCCTGCTTGCTGTCATAGTGCAGAGCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp ATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTGAGTCTAGGTTGAGTTaGGGAAAAAGCACCATGGGT +
Preference number: 4 (lower is better)
Translates to: MVYVHVLHRPLAATLFLPESRLS*GKSTMG
Trigger: ACCCATGGTGCTTTTTCCCCAACTCAACCTAGACTC...AGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp ACTGTAAGAGGTCAGGTACAGTGCTGTGACGATACAAAGATGAACATGATTGGTTGGGTGTGGAGCAGTTaGACCACGGGGTGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: TVRGQVQCCDDTKMNMIGWVWSS*TTGCPR
Trigger: ACGAGGACACCCCGTGGTCCAACTGCTCCACACCCA...ACCAATCATGTTCATCTTTGTATCGTCACAGCACTGTACCTGACCTCTTACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CCA 90 bp TGTCTTATTGTATTGAGAGAAGCAAGGAGGGCTGAAGAACGACAATGTTCTTTAGGAGAGGCACTCATGTaGACACCCGGTTCGGGCGCG +
Preference number: 4 (lower is better)
Translates to: CLIVLREARRAEERQCSLGEALM*TPGSGA
Trigger: CGCGCCCGAACCGGGTGTCCACATGAGTGCCTCTCC...TAAAGAACATTGTCGTTCTTCAGCCCTCCTTGCTTCTCTCAATACAATAAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS-3UTR CCA 90 bp TTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTGTTTGCTCTGTTGGCTGCTaGATCTGCTGGGAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: FHGSSYFTLRFGWAALCVCSVGC*ICWERH
Trigger: GTGCCTCTCCCAGCAGATCCAGCAGCCAACAGAGCA...AACACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638157.1
3UTR CAA 72 bp TTCACTTGGCCTTTTCCTGCCCAAACACATGCACCTTaGCCAAATCCTTCCCTCCAGTGGCTCAGATGCTTT +
Preference number: 4 (lower is better)
Translates to: FTWPFPAQTHAP*PNPSLQWLRCF
Trigger: AAAGCATCTGAGCCACTGGAGGGAAGGATTTGGCAAAGGTGCATGTGTTTGGGCAGGAAAAGGCCAAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TGGGCTGTGGGCATAGGCACTCTTCACAGGGATTACATGAAACTGCATTTCCTCATGAGTAATCAACAATaGGGCGCTCCGTGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: WAVGIGTLHRDYMKLHFLMSNQQ*GAPCLE
Trigger: TTCCAGACACGGAGCGCCTCATTGTTGATTACTCAT...GAGGAAATGCAGTTTCATGTAATCCCTGTGAAGAGTGCCTATGCCCACAGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTATGCTGCTCTTGGATaGGCTGTCATTCACTTCATT +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALYAALG*AVIHFI
Trigger: AATGAAGTGAATGACAGCTCATCCAAGAGCAGCATA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GCATCTTCTAGAAGAAAACACAGAGGTGAAGAGGATTGGGGCCAACCTGCTGGATGTCCTCATTGTCATTaGAGTCCAGTGAAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: ASSRRKHRGEEDWGQPAGCPHCH*SPVKGS
Trigger: ACTCCCCTTCACTGGACTTCAATGACAATGAGGACA...TCCAGCAGGTTGGCCCCAATCCTCTTCACCTCTGTGTTTTCTTCTAGAAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp ATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCGGAAGGGCGAGTTGGTaGAGAGGAGGTCATAGAGCT +
Preference number: 4 (lower is better)
Translates to: IYMVYVHVLHRPLAATLFGRASW*RGGHRA
Trigger: AGCTCTATGACCTCCTCTTCACCAACTCGCCCTTCC...GAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp TGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTAGAAGTTCTTCTCGATaGACGTTTTCACTAACCCCC +
Preference number: 4 (lower is better)
Translates to: WSMYMYCTGLLQPPCSCLRSSSR*TFSLTP
Trigger: GGGGGTTAGTGAAAACGTTCATCGAGAAGAACTTCT...AAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp TTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCAACCTGCCACATGTTTaGTCCTGTGGCCCACATCCT +
Preference number: 4 (lower is better)
Translates to: FIWSMYMYCTGLLQPPCSNLPHV*SCGPHP
Trigger: AGGATGTGGGCCACAGGATCAAACATGTGGCAGGTT...GGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp ATATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTACGGAGCAGGACAGCTaGGCTCGTGGGCATGGTTTA +
Preference number: 4 (lower is better)
Translates to: IFIWSMYMYCTGLLQPPCTEQDS*ARGHGL
Trigger: TAAACCATGCCCACGAGCTCAGCTGTCCTGCTCCGT...ACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS-3UTR TCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGCTTAAGACTTCTTTTTaGGACCTTAGGGTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALLKTSF*DLRVFA
Trigger: TGCGAAGACCCTAAGGTCTCAAAAAGAAGTCTTAAG...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp ATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCAAGGGGATTAGGGAATaGAGCACCTTAAGCAATGCC +
Preference number: 4 (lower is better)
Translates to: IWSMYMYCTGLLQPPCSCKGIRE*STLSNA
Trigger: GGCATTGCTTAAGGTGCTTCATTCCCTAATCCCCTT...GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCACTGACAGCTCTAAGTaGAGGCCTCAGAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: FIWSMYMYCTGLLQPPCSTDSSK*RPQSHR
Trigger: TCTGTGGCTCTGAGGCCTTCACTTAGAGCTGTCAGT...GGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCCCATTGCCAAGTCTaGGAAACTCAGGATTGGGAA +
Preference number: 4 (lower is better)
Translates to: YMVYVHVLHRPLAATLFLPHCQV*ETQDWE
Trigger: TTCCCAATCCTGAGTTTCTCAGACTTGGCAATGGGG...CAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGAAGAATAAGCAAGACTaGAGACCTCTGCATGCCAAA +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALKNKQD*RPLHAK
Trigger: TTTGGCATGCAGAGGTCTTCAGTCTTGCTTATTCTT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp AGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAAGAACCAGGAGGGCTCTTCTaGCATACTCAGTACTGCCCT +
Preference number: 4 (lower is better)
Translates to: RVFAGITLAQHFPSKSQEPGGLF*HTQYCP
Trigger: AGGGCAGTACTGAGTATGTCAGAAGAGCCCTCCTGG...TTCTTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GACTTGCCCAAGGCCACAGAGCTTAGTCAATGGAAAAGTCAGGACCCAGGCTCAACTTATCTGCAAGGGTaGGTTAAGATGTCTTTCGCA +
Preference number: 4 (lower is better)
Translates to: DLPKATELSQWKSQDPGSTYLQG*VKMSFA
Trigger: TGCGAAAGACATCTTAACTCACCCTTGCAGATAAGT...TGAGCCTGGGTCCTGACTTTTCCATTGACTAAGCTCTGTGGCCTTGGGCAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCTGATCTTGCTGGCCTaGGATGTAATCCTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: YMVYVHVLHRPLAATLFLLILLA*DVILLS
Trigger: GGACAAGAGGATTACATCTCAGGCCAGCAAGATCAG...CAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp ATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTAGAAGCAAGGAGGGCTaGAGAACGACAATGTTCTTT +
Preference number: 4 (lower is better)
Translates to: MVYVHVLHRPLAATLFLPRSKEG*RTTMFF
Trigger: AAAGAACATTGTCGTTCTTCAGCCCTCCTTGCTTCT...AGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp TGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTTCCGTGTCTGGAAGCTaGTTAAAGAGCTTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: WSMYMYCTGLLQPPCSCLSVSGS*LKSFLK
Trigger: CTTCAGAAAGCTCTTTAAGCAGCTTCCAGACACGGA...AAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp TATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTCCGTGTCTGGAAGCTaGTTAAAGAGCTTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: YGLCTCIAQASCSHPVPASVSGS*LKSFLK
Trigger: CTTCAGAAAGCTCTTTAAGCAGCTTCCAGACACGGA...GGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp ACAGTTATAGATCCAAATACAGATGGCCAGACAACTCGACTGCACTCGACCCGTCTGGCTTGGTCTCTATaGTGCTCTTGGATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: TVIDPNTDGQTTRLHSTRLAWSL*CSWMSC
Trigger: ACAGCTCATCCAAGAGCAGCATAGAGACCAAGCCAG...ACGGGTCGAGTGCAGTCGAGTTGTCTGGCCATCTGTATTTGGATCTATAACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp GATTTGGCTGGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACACTTCATTCACGTACTaGCGGCCACTCAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: DLAGQPCVFLGTSSKFSDTSFTY*RPLRSS
Trigger: TGAGGACCTGAGTGGCCGGCAGTACGTGAATGAAGT...GTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCCAGCCAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp ACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCCTCCCGTCTGTGTGGAACCTaGCACATGTTTGATCCTGTG +
Preference number: 4 (lower is better)
Translates to: TMFFKPSDVGEIVSISSSRLCGT*HMFDPV
Trigger: CACAGGATCAAACATGTGGCAGGTTCCACACAGACG...GGAGGAGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTGTGTCCTCCGGGATATaGCGCGTCTGTGTGGAACCT +
Preference number: 4 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVVSSGI*RVCVEP
Trigger: AGGTTCCACACAGACGCGGCATATCCCGGAGGACAC...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp ACACATGCACCTTTGCCAAATCCTTCCCTCCAGTGGCTCAGATGCTTTTTCTATCAGGCAGTGAGGGTCTaGGTGGTGTATTCCAACATC +
Preference number: 4 (lower is better)
Translates to: THAPLPNPSLQWLRCFFYQAVRV*VVYSNI
Trigger: GATGTTGGAATACACCACGCAGACCCTCACTGCCTG...ATAGAAAAAGCATCTGAGCCACTGGAGGGAAGGATTTGGCAAAGGTGCATGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GTACTAGCAGTAAGTTTTCTGACCTTGCGCACAGCGCCAGGCAAAGTACAGTTACAGCCACCCTGTTCCTaGCTTGTCAATGATAGCGAT +
Preference number: 4 (lower is better)
Translates to: VLAVSFLTLRTAPGKVQLQPPCS*LVNDSD
Trigger: ATCGCTATCATTGACAAGGCAGGAACAGGGTGGCTG...TAACTGTACTTTGCCTGGCGCTGTGCGCAAGGTCAGAAAACTTACTGCTAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTACCATAAGAAAACGCTaGTCCGGCCAGCACAGGGCG +
Preference number: 4 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVTIRKR*SGQHRA
Trigger: CGCCCTGTGCTGGCCGGAGCAGCGTTTTCTTATGGT...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp ACCTTAAGCAATGCCGTCTTAAGACTTCTTTTTGAGACCTTAGGGTCTTCGCAGCCTGCCCTCCTCAGCTaGTCCACCATAAGAAAACGC +
Preference number: 4 (lower is better)
Translates to: TLSNAVLRLLFETLGSSQPALLS*STIRKR
Trigger: GCGTTTTCTTATGGTGGAGCAGCTGAGGAGGGCAGG...CTGCGAAGACCCTAAGGTCTCAAAAAGAAGTCTTAAGACGGCATTGCTTAAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GCTCAGATGCTTTTTCTATGTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTTATTTGGTGTGGTCGTaGCGCCTTACAGAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: AQMLFLCANCLRQSSPLAYLVWS*RLTEVP
Trigger: AGGGACTTCTGTAAGGCGGCACGACCACACCAAATA...AGCCAGTGGAGACGACTGTCTGAGACAGTTTGCACATAGAAAAAGCATCTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529432.5
CDS-3UTR GCA 90 bp ATATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTCTGGGGGCGCTTCTTTaGTCTGCTGTTTCACACCGC +
Preference number: 4 (lower is better)
Translates to: IFIWSMYMYCTGLLQPPCLGALL*SAVSHR
Trigger: GCGGTGTGAAACAGCAGAGCAAAGAAGCGCCCCCAG...ACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529432.5
CDS-3UTR GCA 90 bp GAACCCTTTTTAAGTCATCCCAAAGGTCCCACCGTGGCACCTTTAATAATTAAACGAGTCTCGGGAGCCTaGCACCACACAATGCAGCCT +
Preference number: 4 (lower is better)
Translates to: EPFLSHPKGPTVAPLIIKRVSGA*HHTMQP
Trigger: AGGCTGCATTGTGTGGTGGCAGGCTCCCGAGACTCG...TTTAATTATTAAAGGTGCCACGGTGGGACCTTTGGGATGACTTAAAAAGGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTGGCAACCCATCTTGGTaGTCACCACTCACAGTGTTC +
Preference number: 4 (lower is better)
Translates to: ERQCSLSLQMLGRSSASAGNPSW*SPLTVF
Trigger: GAACACTGTGAGTGGTGAGCACCAAGATGGGTTGCC...AGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp TGGGCTGTGGGCATAGGCACTCTTCACAGGGATTACATGAAACTGCATTTCCTCCACTTGGCCTTTTCCTaGCCAAACACATGCACCTTT +
Preference number: 4 (lower is better)
Translates to: WAVGIGTLHRDYMKLHFLHLAFS*PNTCTF
Trigger: AAAGGTGCATGTGTTTGGGCAGGAAAAGGCCAAGTG...GAGGAAATGCAGTTTCATGTAATCCCTGTGAAGAGTGCCTATGCCCACAGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp AGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAAGAAAATCTCCACAAGCTCTaGCTGGAGCTGGTGGGACTC +
Preference number: 4 (lower is better)
Translates to: RVFAGITLAQHFPSKSQENLHKL*LELVGL
Trigger: GAGTCCCACCAGCTCCAGGCAGAGCTTGTGGAGATT...TTCTTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp TTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTGTTCAGTACTGCCCTCTCTaGCACCTTTTCCTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: FHGSSYFTLRFGWAALCVQYCPL*HLFLLG
Trigger: TCCCAGGAGGAAAAGGTGGCAGAGAGGGCAGTACTG...AACACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp TTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCAGACAACTCGACTaGACTCGACCCGTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: LYGLCTCIAQASCSHPVPARQLD*TRPVFF
Trigger: AAAGAACACGGGTCGAGTGCAGTCGAGTTGTCTGGC...AGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp AGTATTCCAGTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCGATGGACGGCAGCTaGAGGAACTCCTTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: SIPVNTGKLVSHAVFTICSMDGS*RNSLPG
Trigger: CCCCGGCAAGGAGTTCCTGCAGCTGCCGTCCATCGA...ACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCACTGGAATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR GCA 90 bp TTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTCCTGCTTTACAGCAGTaGTGCAAGAGACGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LYGLCTCIAQASCSHPVPPALQQ*CKRRSL
Trigger: CAGAGACCGTCTCTTGCAGCACTGCTGTAAAGCAGG...AGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTTCTCTGCTTGTAGGTaGGGCTTAACACATTATACC +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALFSACR*GLTHYT
Trigger: GGTATAATGTGTTAAGCCCCACCTACAAGCAGAGAA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR CCA 90 bp TTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCAGTCCTCGTCATCACTaGTCAGGCCCAATTCGTTCC +
Preference number: 4 (lower is better)
Translates to: FIWSMYMYCTGLLQPPCSSPRHH*SGPIRS
Trigger: GGAACGAATTGGGCCTGACCAGTGATGACGAGGACT...GGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTCTCTATGCTGCTCTTaGATGAGCTGTCATTCACTT +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALSLCCS*MSCHSL
Trigger: AAGTGAATGACAGCTCATCCAAGAGCAGCATAGAGA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp TTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCGACTGGCATCTGGCTTaGTCTCTATGCTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: FIWSMYMYCTGLLQPPCSDWHLA*SLCCSW
Trigger: CCAAGAGCAGCATAGAGACCAAGCCAGATGCCAGTC...GGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTGACTGGCATCTGGCTTaGTCTCTATGCTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: ERQCSLSLQMLGRSSASADWHLA*SLCCSW
Trigger: CCAAGAGCAGCATAGAGACCAAGCCAGATGCCAGTC...AGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp TTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGACTGGCATCTGGCTTaGTCTCTATGCTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LYGLCTCIAQASCSHPVPDWHLA*SLCCSW
Trigger: CCAAGAGCAGCATAGAGACCAAGCCAGATGCCAGTC...AGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAACTCCCTCCTGTGCTGTGGACTGGCATCTaGCTTGGTCTCTATGCTGCT +
Preference number: 4 (lower is better)
Translates to: DVKARTYLKDDLAQLPPVLWTGI*LGLYAA
Trigger: AGCAGCATAGAGACCAAGCCAGATGCCAGTCCACAG...CACAGGAGGGAGTTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTCCATGAAATCCCGCTaGAAGGGCGAGTTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: FIWSMYMYCTGLLQPPCSSMKSR*KGELVK
Trigger: CTTCACCAACTCGCCCTTCCAGCGGGATTTCATGGA...GGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp TTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTTGGGGTAACCTTTCTTaGAGCCTTAGACCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LYGLCTCIAQASCSHPVPWGNLS*SLRPCQ
Trigger: CTGGCAGGGTCTAAGGCTCCAAGAAAGGTTACCCCA...AGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GGTTGGGGGAATGAAAGTCAAGGATGTCAAGGATGTCAAGTGGTGAATGGGATGTCGTGGTACTTTTGTTaGGACTCTAAGAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GWGNESQGCQGCQVVNGMSWYFC*DSKSWA
Trigger: GGCCCAGCTCTTAGAGTCCCAACAAAAGTACCACGA...CATCCCATTCACCACTTGACATCCTTGACATCCTTGACTTTCATTCCCCCAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp TGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTTGGAGCTCAGTATCGTaGTACTTTTGTTGGGACTCT +
Preference number: 4 (lower is better)
Translates to: WSMYMYCTGLLQPPCSCLWSSVS*YFCWDS
Trigger: AGAGTCCCAACAAAAGTACCACGATACTGAGCTCCA...AAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp TATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGAGCGAGTCCTTCATCTaGTCAAGGAGCATCACTGAG +
Preference number: 4 (lower is better)
Translates to: YMVYVHVLHRPLAATLFLSESFI*SRSITE
Trigger: CTCAGTGATGCTCCTTGACCAGATGAAGGACTCGCT...CAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp TATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGGGACAGCTGAGCTCGTaGGCATGGTTTATGACTTTG +
Preference number: 4 (lower is better)
Translates to: YMVYVHVLHRPLAATLFLGQLSS*AWFMTL
Trigger: CAAAGTCATAAACCATGCCCACGAGCTCAGCTGTCC...CAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS-3UTR CCA 90 bp GCTCAGATGCTTTTTCTATGTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTCCCGCTCCTTCTCCCTaGTACATAGGCATTATCTCT +
Preference number: 4 (lower is better)
Translates to: AQMLFLCANCLRQSSPLAPAPSP*YIGIIS
Trigger: AGAGATAATGCCTATGTACCAGGGAGAAGGAGCGGG...AGCCAGTGGAGACGACTGTCTGAGACAGTTTGCACATAGAAAAAGCATCTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTAGTCTTCCCAGCCTCTaGCCTAACCCCCAAGATGAT +
Preference number: 4 (lower is better)
Translates to: ERQCSLSLQMLGRSSASASLPSL*PNPQDD
Trigger: ATCATCTTGGGGGTTAGGCCAGAGGCTGGGAAGACT...AGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp ACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCCTTTGGGAAGATGGTCTaGTCCATGCAGAGAGTGGTC +
Preference number: 4 (lower is better)
Translates to: TTMFFKPSDVGEIVSISSFGKMV*SMQRVV
Trigger: GACCACTCTCTGCATGGACCAGACCATCTTCCCAAA...GGAGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTGTTCTTTCCCATAGATaGCCCAGTGCAGGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: ERQCSLSLQMLGRSSASAVLSHR*PSAGVG
Trigger: CCCAACACCTGCACTGGGCCATCTATGGGAAAGAAC...AGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp TTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCGTTCTTTCCCATAGATaGCCCAGTGCAGGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: FIWSMYMYCTGLLQPPCSVLSHR*PSAGVG
Trigger: CCCAACACCTGCACTGGGCCATCTATGGGAAAGAAC...GGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp AACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTTCCCGCTTCCTCGCTTGCTaGCGTCTTTGCCTTAGCGGG +
Preference number: 4 (lower is better)
Translates to: NTGKLVSHAVFTICSTSSRFLAC*RLCLSG
Trigger: CCCGCTAAGGCAAAGACGCCAGCAAGCGAGGAAGCG...GGAAGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CCA 90 bp GTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTCGCTTCCTCGCTTGCTaGCGTCTTTGCCTTAGCGGG +
Preference number: 4 (lower is better)
Translates to: VNTGKLVSHAVFTICSTSRFLAC*RLCLSG
Trigger: CCCGCTAAGGCAAAGACGCCAGCAAGCGAGGAAGCG...AGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CCA 90 bp TTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTAGTTACTGGCAGTGTTaGCTCGCAGAAAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LYGLCTCIAQASCSHPVPSYWQC*LAERPA
Trigger: AGCTGGCCTTTCTGCGAGCCAACACTGCCAGTAACT...AGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS-3UTR CCA 90 bp TTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTGTTACAAGTGAGCCGAGGTaGTCAGCGTGGTTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: FHGSSYFTLRFGWAALCVTSEPR*SAWFSG
Trigger: TCCTGAGAACCACGCTGACCACCTCGGCTCACTTGT...AACACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646146.1
CDS-3UTR TCA 90 bp AGCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTAACATATTGGAAAAGATaGCGAAGTCCCAAAAGAACA +
Preference number: 4 (lower is better)
Translates to: SQLPCLEQRPPFCFCNVLTYWKR*RSPKRT
Trigger: TGTTCTTTTGGGACTTCGTCATCTTTTCCAATATGT...TAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529750.5
CDS-3UTR TCA 90 bp ACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCCATGAGTAATCAACAATaGGGCGCTCCGTGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: TTMFFKPSDVGEIVSISSMSNQQ*GAPCLE
Trigger: TTCCAGACACGGAGCGCCTCATTGTTGATTACTCAT...GGAGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp TGGGCTGTGGGCATAGGCACTCTTCACAGGGATTACATGAAACTGCATTTCCTCTCTTTGGAGTGCACATaGGTAATCAACAATGAGGCG +
Preference number: 4 (lower is better)
Translates to: WAVGIGTLHRDYMKLHFLSLECT*VINNEA
Trigger: CGCCTCATTGTTGATTACTCATGTGCACTCCAAAGA...GAGGAAATGCAGTTTCATGTAATCCCTGTGAAGAGTGCCTATGCCCACAGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGGAAGAAGTGCTTTTCTaGATCAGTGCAAACTTGGAT +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALEEVLF*ISANLD
Trigger: ATCCAAGTTTGCACTGATTCAGAAAAGCACTTCTTC...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTAATGTTGGTTCGTTCAAAGGGGCCCCAAACGAAGTaGAGAAGTGCTTTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: VQTVSDSRLHWLMLVRSKGPQTK*RSAFLN
Trigger: ATTCAGAAAAGCACTTCTTCACTTCGTTTGGGGCCC...CTTTGAACGAACCAACATTAGCCAGTGGAGACGACTGTCTGAGACAGTTTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TACTTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTAGTATCCCATTGTGTTaGAGTCGTCGTCAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: YFHGSSYFTLRFGWAALCSIPLC*SRRQGA
Trigger: TGCCCCCTGACGACGACTTCAACACAATGGGATACT...ACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp AGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATTGTTATGCTGCTCTTGGATaGGCTGTCATTCACTTCATT +
Preference number: 4 (lower is better)
Translates to: SCLAWSRGHPFASAMSYCYAALG*AVIHFI
Trigger: AATGAAGTGAATGACAGCTCATCCAAGAGCAGCATA...ACAATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp ACAGTTATAGATCCAAATACAGATGGCCAGACAACTCGACTGCACTCGACCCGTTTAGTGTGCTGTTGGTaGTGGATTTCTTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: TVIDPNTDGQTTRLHSTRLVCCW*WISWAA
Trigger: AGCTGCCCAAGAAATCCATCACCAACAGCACACTAA...ACGGGTCGAGTGCAGTCGAGTTGTCTGGCCATCTGTATTTGGATCTATAACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp ATATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTGTCGGAAGAGTCACTaGGCTCAGTGGGGATGTCCT +
Preference number: 4 (lower is better)
Translates to: IFIWSMYMYCTGLLQPPCCRKSH*AQWGCP
Trigger: AGGACATCCCCACTGAGCTCAGTGACTCTTCCGACA...ACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp ATATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTGGTCTGTGTCTCCCTaGCAGTGGCAGTTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: IFIWSMYMYCTGLLQPPCWSVSP*QWQFWE
Trigger: CTCCCAAAACTGCCACTGTCAGGGAGACACAGACCA...ACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp ATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCGTCAAGGAGCATCACTaGGGATTTGATGATTTCCCT +
Preference number: 4 (lower is better)
Translates to: IWSMYMYCTGLLQPPCSCVKEHH*GFDDFP
Trigger: AGGGAAATCATCAAATCCTCAGTGATGCTCCTTGAC...GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GACCTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCACAGGAGGATGCAAATaGGGATACAGGAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: DLRVFAGITLAQHFPSKSTGGCK*GYRRAA
Trigger: AGCAGCTCTCCTGTATCCTCATTTGCATCCTCCTGT...GCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS-3UTR TCA 90 bp ATATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTGCCCAGAGGGCCCCGTaGATTCAGATAAATGCATGG +
Preference number: 4 (lower is better)
Translates to: IFIWSMYMYCTGLLQPPCAQRAP*IQINAW
Trigger: CCATGCATTTATCTGAATTCACGGGGCCCTCTGGGC...ACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GCATCTTCTAGAAGAAAACACAGAGGTGAAGAGGATTGGGGCCAACCTGCTGGAACAGTAGTTAGTGTATaGGGGATGATGAATGTGCCC +
Preference number: 4 (lower is better)
Translates to: ASSRRKHRGEEDWGQPAGTVVSV*GMMNVP
Trigger: GGGCACATTCATCATCCCTCATACACTAACTACTGT...TCCAGCAGGTTGGCCCCAATCCTCTTCACCTCTGTGTTTTCTTCTAGAAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAACTCCCTCCTGTGTTCTGTCTTTTGGGCTaGTGTTCTGGGACATCTGGG +
Preference number: 4 (lower is better)
Translates to: DVKARTYLKDDLAQLPPVFCLLG*CSGTSG
Trigger: CCCAGATGTCCCAGAACATCAGCCCAAAAGACAGAA...CACAGGAGGGAGTTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp ATGGCCAGACAACTCGACTGCACTCGACCCGTGTTCTTTCCCATAGATGGCCCATATCTTTGGGGTAGATaGGTGATAAAATCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: MARQLDCTRPVFFPIDGPYLWGR*VIKSSV
Trigger: GACAGAAGATTTTATCACTCATCTACCCCAAAGATA...TGGGCCATCTATGGGAAAGAACACGGGTCGAGTGCAGTCGAGTTGTCTGGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTTTCACAGGGATTACATaGAACTGCATTTCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: WSMYMYCTGLLQPPCSCLFTGIT*NCISSH
Trigger: ATGGGAGGAAATGCAGTTTCATGTAATCCCTGTGAA...AAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTTTGGCTCAGAGCCCATaGGCCTTGATCCCTACCAGT +
Preference number: 4 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVLAQSP*ALIPTS
Trigger: ACTGGTAGGGATCAAGGCTCATGGGCTCTGAGCCAA...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp AACCCCCAAGATGATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAACCAGGAGGGCTCTTCTaGCATACTCAGTACTGCCCT +
Preference number: 4 (lower is better)
Translates to: NPQDDVKARTYLKDDLAQPGGLF*HTQYCP
Trigger: AGGGCAGTACTGAGTATGTCAGAAGAGCCCTCCTGG...TTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATCATCTTGGGGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp AGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATTGTACTTATCTGCAAGGGTaGGTTAAGATGTCTTTCGCA +
Preference number: 4 (lower is better)
Translates to: SCLAWSRGHPFASAMSYCTYLQG*VKMSFA
Trigger: TGCGAAAGACATCTTAACTCACCCTTGCAGATAAGT...ACAATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp ACCTTAAGCAATGCCGTCTTAAGACTTCTTTTTGAGACCTTAGGGTCTTCGCAGGAGAGAGTCGCACCATaGTTAGCTTGTCTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: TLSNAVLRLLFETLGSSQERVAP*LACLRP
Trigger: TGGCCTCAGACAAGCTAATCATGGTGCGACTCTCTC...CTGCGAAGACCCTAAGGTCTCAAAAAGAAGTCTTAAGACGGCATTGCTTAAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAACTCCCTCCTGTGCTGATCTTGCTGGCCTaGGATGTAATCCTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: DVKARTYLKDDLAQLPPVLILLA*DVILLS
Trigger: GGACAAGAGGATTACATCTCAGGCCAGCAAGATCAG...CACAGGAGGGAGTTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp AGAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCCTGGCAGAGCAATTaGGAAAGTCCACCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: RTTMFFKPSDVGEIVSISSWQSN*ESPPSL
Trigger: AAGACTGGGTGGACTTTCTCAATTGCTCTGCCAGGA...GCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp AACTCCCTGCGGCCAGGTCTGCTCTGTCACTTGACTCCCAACAAAGAACCCTTTCTTCTAAGTGAATACTaGGCAATACATCAAGCTCGA +
Preference number: 4 (lower is better)
Translates to: NSLRPGLLCHLTPNKEPFLLSEY*AIHQAR
Trigger: TCGAGCTTGATGTATTGCTCAGTATTCACTTAGAAG...AAAGGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGACCTGGCCGCAGGGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp ATCCCTACCAGTGTCCCTCACCCAAAGGCCTGGACAAGAACTGAACAAGGACCCAGAAACCCTTCTAAGTaGATACTGAGCAATACATCA +
Preference number: 4 (lower is better)
Translates to: IPTSVPHPKAWTRTEQGPRNPSK*ILSNTS
Trigger: TGATGTATTGCTCAGTATTCACTTAGAAGGGTTTCT...GGGTCCTTGTTCAGTTCTTGTCCAGGCCTTTGGGTGAGGGACACTGGTAGGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp AGAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCAAGAAAACACAGAGGTaGAGAGGATTGGGGCCAACC +
Preference number: 4 (lower is better)
Translates to: RTTMFFKPSDVGEIVSISKKTQR*RGLGPT
Trigger: GGTTGGCCCCAATCCTCTTCACCTCTGTGTTTTCTT...GCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp ATATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTTTTCTTGGAATTCTTaGCGCCGCTCCGGCCGGACT +
Preference number: 4 (lower is better)
Translates to: IFIWSMYMYCTGLLQPPCFSWNS*RRSGRT
Trigger: AGTCCGGCCGGAGCGGCGGCAAGAATTCCAAGAAAA...ACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR GCA 90 bp GCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATAACGAAGTGAAGAAGTaGTTTTCTGAATCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: ASCLAWSRGHPFASAMSYNEVKK*FSESVQ
Trigger: TTGCACTGATTCAGAAAAGCACTTCTTCACTTCGTT...ATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp CTGTACTTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTCAAGGAGAGCATTCTaGCAGAGCCGGAACATCATC +
Preference number: 4 (lower is better)
Translates to: LYFHGSSYFTLRFGWAALSRRAF*QSRNII
Trigger: GATGATGTTCCGGCTCTGGCAGAATGCTCTCCTTGA...CAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAAGTACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp AGAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCCTGGCTTGGTCTCTATaGTGCTCTTGGATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: RTTMFFKPSDVGEIVSISLAWSL*CSWMSC
Trigger: ACAGCTCATCCAAGAGCAGCATAGAGACCAAGCCAG...GCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp TTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCCGTCTGTGTGGAACCTaGCACATGTTTGATCCTGTG +
Preference number: 4 (lower is better)
Translates to: FIWSMYMYCTGLLQPPCSRLCGT*HMFDPV
Trigger: CACAGGATCAAACATGTGGCAGGTTCCACACAGACG...GGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp GAACCCTTTTTAAGTCATCCCAAAGGTCCCACCGTGGCACCTTTAATAATTAAAGTGTCCTCCGGGATATaGCGCGTCTGTGTGGAACCT +
Preference number: 4 (lower is better)
Translates to: EPFLSHPKGPTVAPLIIKVSSGI*RVCVEP
Trigger: AGGTTCCACACAGACGCGGCATATCCCGGAGGACAC...TTTAATTATTAAAGGTGCCACGGTGGGACCTTTGGGATGACTTAAAAAGGGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp TTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTGTTCAGGCAGTGAGGGTCTaGGTGGTGTATTCCAACATC +
Preference number: 4 (lower is better)
Translates to: FHGSSYFTLRFGWAALCVQAVRV*VVYSNI
Trigger: GATGTTGGAATACACCACGCAGACCCTCACTGCCTG...AACACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp TTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCCAGCCACCCTGTTCCTaGCTTGTCAATGATAGCGAT +
Preference number: 4 (lower is better)
Translates to: FIWSMYMYCTGLLQPPCSQPPCS*LVNDSD
Trigger: ATCGCTATCATTGACAAGGCAGGAACAGGGTGGCTG...GGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTTCCCCCACCTCCCTCTaGTGCTGTTATTTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVSPTSL*CCYLVW
Trigger: CCACACCAAATAACAGCAGCAGAGGGAGGTGGGGGA...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529432.5
CDS-3UTR GCA 90 bp TTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGGAGTTACTGGCAGTaGTCCATGACCATCCCAAAG +
Preference number: 4 (lower is better)
Translates to: FIWSMYMYCTGLLQPPCSWSYWQ*SMTIPK
Trigger: CTTTGGGATGGTCATGGAGCACTGCCAGTAACTCCA...GGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529432.5
CDS-3UTR GCA 90 bp ACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCCTCCCACTTGGCCTTTTCCTaGCCAAACACATGCACCTTT +
Preference number: 4 (lower is better)
Translates to: TMFFKPSDVGEIVSISSSHLAFS*PNTCTF
Trigger: AAAGGTGCATGTGTTTGGGCAGGAAAAGGCCAAGTG...GGAGGAGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp ATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTGTGAATTCAGATAAATaGATGGTGCTAGTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: MVYVHVLHRPLAATLFLPVNSDK*MVLVGQ
Trigger: TTGGCCCACTAGCACCATGCATTTATCTGAATTCAC...AGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp TATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCTGAAGACCTCTGCATaGCAAACTGGCTATGACTCT +
Preference number: 4 (lower is better)
Translates to: YMVYVHVLHRPLAATLFLLKTSA*QTGYDS
Trigger: AGAGTCATAGCCAGTTTGGCATGCAGAGGTCTTCAG...CAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp TGGGCTGTGGGCATAGGCACTCTTCACAGGGATTACATGAAACTGCATTTCCTCAGGACATTCCCTATGTaGACACATTGTCTAGTGGGT +
Preference number: 4 (lower is better)
Translates to: WAVGIGTLHRDYMKLHFLRTFPM*THCLVG
Trigger: ACCCACTAGACAATGTGTGCACATAGGGAATGTCCT...GAGGAAATGCAGTTTCATGTAATCCCTGTGAAGAGTGCCTATGCCCACAGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACCTTGCGCACAGGACATTCCCTATGTaGACACATTGTCTAGTGGGT +
Preference number: 4 (lower is better)
Translates to: GQPCVFLGTSSKFSDLAHRTFPM*THCLVG
Trigger: ACCCACTAGACAATGTGTGCACATAGGGAATGTCCT...GTGCGCAAGGTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTGGGAAGGGAGAAGAGTaGTATTTCTCCTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVGKGEE*YFSWGQ
Trigger: CTGCCCCCAGGAGAAATAGCACTCTTCTCCCTTCCC...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GCTCAGATGCTTTTTCTATGTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTTGCAAGTTTCTGCTCTaGACTATGACAGCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: AQMLFLCANCLRQSSPLACKFLL*TMTASR
Trigger: CCTGCTTGCTGTCATAGTGCAGAGCAGAAACTTGCA...AGCCAGTGGAGACGACTGTCTGAGACAGTTTGCACATAGAAAAAGCATCTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp ACACATGCACCTTTGCCAAATCCTTCCCTCCAGTGGCTCAGATGCTTTTTCTATAGACCCCGGAGCTGTTaGACAGAACATCAAAACAGG +
Preference number: 4 (lower is better)
Translates to: THAPLPNPSLQWLRCFFYRPRSC*TEHQNR
Trigger: CCTGTTTTGATGTTCTGTGCAACAGCTCCGGGGTCT...ATAGAAAAAGCATCTGAGCCACTGGAGGGAAGGATTTGGCAAAGGTGCATGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp AGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAAGAAGCCAGACAACTCGACTaGACTCGACCCGTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: RVFAGITLAQHFPSKSQEARQLD*TRPVFF
Trigger: AAAGAACACGGGTCGAGTGCAGTCGAGTTGTCTGGC...TTCTTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp TATTCCAGTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCGCTTGCTGGCGTCTTTaGCTTAGCGGGACTCGGCAG +
Preference number: 4 (lower is better)
Translates to: YSSEHWKVSKPCCLYHLFACWRL*LSGTRQ
Trigger: CTGCCGAGTCCCGCTAAGGCAAAGACGCCAGCAAGC...GAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCACTGGAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR GCA 90 bp AAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTTCCTTCCTAGGCTGCGCTTCCTCGCTTaGTGGCGTCTTTGCCTTAGC +
Preference number: 4 (lower is better)
Translates to: KVSKPCCLYHLFHFFLPRLRFLA*WRLCLS
Trigger: GCTAAGGCAAAGACGCCAGCAAGCGAGGAAGCGCAG...CCTAGGAAGGAAGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR GCA 90 bp GAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTTCCCGGCCTCCAGGCTCTaGTCCTGTACGTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: EHWKVSKPCCLYHLFHFFPASRL*SCTFFM
Trigger: CATGAAGAACGTACAGGAGCAGAGCCTGGAGGCCGG...GAAGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR GCA 90 bp CACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTTCCTTCCGGCCTCCAGGCTCTaGTCCTGTACGTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: HWKVSKPCCLYHLFHFFLPASRL*SCTFFM
Trigger: CATGAAGAACGTACAGGAGCAGAGCCTGGAGGCCGG...AAGGAAGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR GCA 90 bp GTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTGGACCCTGCTTTCACTaGACTCCTTCCGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: VNTGKLVSHAVFTICSTSGPCFH*TPSAPS
Trigger: TGAGGGAGCGGAAGGAGTGCAGTGAAAGCAGGGTCC...AGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640939.1
CDS-3UTR CCA 90 bp GATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAACTCCCTCCTGTGGCTGAAAGCTGGGCTTaGAGGCAAAGGACAGATTCT +
Preference number: 4 (lower is better)
Translates to: DVKARTYLKDDLAQLPPVAESWA*RQRTDS
Trigger: AGAATCTGTCCTTTGCCTCCAAGCCCAGCTTTCAGC...CACAGGAGGGAGTTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529750.5
CDS-3UTR CCA 90 bp ATATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTCTCCCAGCTGAAAGCTaGGCTTGGAGGCAAAGGACA +
Preference number: 4 (lower is better)
Translates to: IFIWSMYMYCTGLLQPPCLPAES*AWRQRT
Trigger: TGTCCTTTGCCTCCAAGCCCAGCTTTCAGCTGGGAG...ACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529750.5
CDS-3UTR CCA 90 bp CTGTACTTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGAACTCTGGCTTTTCTTaGAATTCTTGCCGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LYFHGSSYFTLRFGWAALNSGFS*NSCRRS
Trigger: GGAGCGGCGGCAAGAATTCCAAGAAAAGCCAGAGTT...CAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAAGTACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000638157.1
CDS-3UTR CCA 90 bp GAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTAACTCTGGCTTTTCTTaGAATTCTTGCCGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: ERQCSLSLQMLGRSSASANSGFS*NSCRRS
Trigger: GGAGCGGCGGCAAGAATTCCAAGAAAAGCCAGAGTT...AGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000638157.1
CDS-3UTR CCA 90 bp ATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCGAATCAGTGCAAACTTaGATGGCATTGGGAATGAGG +
Preference number: 4 (lower is better)
Translates to: IWSMYMYCTGLLQPPCSCESVQT*MALGMR
Trigger: CCTCATTCCCAATGCCATCCAAGTTTGCACTGATTC...GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp TTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTAGTGCCAGAGCTCCTTaGGACACAGAGGCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: LYGLCTCIAQASCSHPVPSARAP*DTEAFQ
Trigger: TTGAAAAGCCTCTGTGTCCCAAGGAGCTCTGGCACT...AGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GATTTGGCTGGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACAGTGCCAGAGCTCCTTaGGACACAGAGGCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: DLAGQPCVFLGTSSKFSDSARAP*DTEAFQ
Trigger: TTGAAAAGCCTCTGTGTCCCAAGGAGCTCTGGCACT...GTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCCAGCCAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp ATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCAGTCCTCGTCATCACTaGTCAGGCCCAATTCGTTCC +
Preference number: 4 (lower is better)
Translates to: IYMVYVHVLHRPLAATLFSPRHH*SGPIRS
Trigger: GGAACGAATTGGGCCTGACCAGTGATGACGAGGACT...GAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp TTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTGTTGACTGGCATCTGGCTTaGTCTCTATGCTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: FHGSSYFTLRFGWAALCVDWHLA*SLCCSW
Trigger: CCAAGAGCAGCATAGAGACCAAGCCAGATGCCAGTC...AACACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp ACCTTAAGCAATGCCGTCTTAAGACTTCTTTTTGAGACCTTAGGGTCTTCGCAGCTGTGGACTGGCATCTaGCTTGGTCTCTATGCTGCT +
Preference number: 4 (lower is better)
Translates to: TLSNAVLRLLFETLGSSQLWTGI*LGLYAA
Trigger: AGCAGCATAGAGACCAAGCCAGATGCCAGTCCACAG...CTGCGAAGACCCTAAGGTCTCAAAAAGAAGTCTTAAGACGGCATTGCTTAAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTTGGGCAGCTGTGGACTaGCATCTGGCTTGGTCTCTA +
Preference number: 4 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVWAAVD*HLAWSL
Trigger: TAGAGACCAAGCCAGATGCCAGTCCACAGCTGCCCA...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp TTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTGTTTTTCTTGGGCAGCTGTaGACTGGCATCTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: FHGSSYFTLRFGWAALCVFLGQL*TGIWLG
Trigger: ACCAAGCCAGATGCCAGTCCACAGCTGCCCAAGAAA...AACACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp ATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCCTCACTGCTCCCTGTaGATGTTAGTGTGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: IYMVYVHVLHRPLAATLFPHCSL*MLVCCW
Trigger: CCAACAGCACACTAACATCCACAGGGAGCAGTGAGG...GAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp AGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAAGAATCCATGAAATCCCGCTaGAAGGGCGAGTTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: RVFAGITLAQHFPSKSQESMKSR*KGELVK
Trigger: CTTCACCAACTCGCCCTTCCAGCGGGATTTCATGGA...TTCTTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TACTTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTTCCATGAAATCCCGCTaGAAGGGCGAGTTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: YFHGSSYFTLRFGWAALCSMKSR*KGELVK
Trigger: CTTCACCAACTCGCCCTTCCAGCGGGATTTCATGGA...ACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GAACCCCCATTGCCAAGTCTGAGAAACTCAGGATTGGGAATGGCTCCCGTAGGGTCCTTTTTCCATGGATaGAAGATGATATCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: EPPLPSLRNSGLGMAPVGSFFHG*KMISEK
Trigger: CTTCTCTGATATCATCTTCCATCCATGGAAAAAGGA...CCCTACGGGAGCCATTCCCAATCCTGAGTTTCTCAGACTTGGCAATGGGGGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGACATGTTTGATCCTGTaGCCCACATCCTCATCTGTG +
Preference number: 4 (lower is better)
Translates to: YMVYVHVLHRPLAATLFLTCLIL*PTSSSV
Trigger: CACAGATGAGGATGTGGGCCACAGGATCAAACATGT...CAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GAACCCTTTTTAAGTCATCCCAAAGGTCCCACCGTGGCACCTTTAATAATTAAAGCAGGTGGAAACCGTTaGGGGTGTCCTCCGGGATAT +
Preference number: 4 (lower is better)
Translates to: EPFLSHPKGPTVAPLIIKAGGNR*GCPPGY
Trigger: ATATCCCGGAGGACACCCCCAACGGTTTCCACCTGC...TTTAATTATTAAAGGTGCCACGGTGGGACCTTTGGGATGACTTAAAAAGGGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp ATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCTGGGGTAACCTTTCTTaGAGCCTTAGACCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: IYMVYVHVLHRPLAATLFWGNLS*SLRPCQ
Trigger: CTGGCAGGGTCTAAGGCTCCAAGAAAGGTTACCCCA...GAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp TGGGCTGTGGGCATAGGCACTCTTCACAGGGATTACATGAAACTGCATTTCCTCTGGAGCTCAGTATCGTaGTACTTTTGTTGGGACTCT +
Preference number: 4 (lower is better)
Translates to: WAVGIGTLHRDYMKLHFLWSSVS*YFCWDS
Trigger: AGAGTCCCAACAAAAGTACCACGATACTGAGCTCCA...GAGGAAATGCAGTTTCATGTAATCCCTGTGAAGAGTGCCTATGCCCACAGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp CTGTACTTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGAGCGAGTCCTTCATCTaGTCAAGGAGCATCACTGAG +
Preference number: 4 (lower is better)
Translates to: LYFHGSSYFTLRFGWAALSESFI*SRSITE
Trigger: CTCAGTGATGCTCCTTGACCAGATGAAGGACTCGCT...CAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAAGTACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GATTTGGCTGGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACAGCGAGTCCTTCATCTaGTCAAGGAGCATCACTGAG +
Preference number: 4 (lower is better)
Translates to: DLAGQPCVFLGTSSKFSDSESFI*SRSITE
Trigger: CTCAGTGATGCTCCTTGACCAGATGAAGGACTCGCT...GTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCCAGCCAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GACCTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCGGAGGGCTCCAAAAATaGAGCTTCCTTCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: DLRVFAGITLAQHFPSKSGGLQK*SFLQSQ
Trigger: CTGAGACTGAAGGAAGCTCCATTTTTGGAGCCCTCC...GCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS-3UTR CCA 90 bp TTCTATGTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTAATGTTGGTTCGTTCTAAAAGCCAAGAATaGCCAGCAAGGGAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: FYVQTVSDSRLHWLMLVRSKSQE*PAREGV
Trigger: CACCCCTTCCCTTGCTGGCCATTCTTGGCTTTTAGA...ACGAACCAACATTAGCCAGTGGAGACGACTGTCTGAGACAGTTTGCACATAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GACCTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCTCTGCTGCTGTTATTTaGTGTGGTCGTGCCGCCTTA +
Preference number: 4 (lower is better)
Translates to: DLRVFAGITLAQHFPSKSSAAVI*CGRAAL
Trigger: TAAGGCGGCACGACCACACCAAATAACAGCAGCAGA...GCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529432.5
CDS-3UTR CCA 90 bp TGGGCTGTGGGCATAGGCACTCTTCACAGGGATTACATGAAACTGCATTTCCTCGGCATAGATTTCACTTaGCCTTTTCCTGCCCAAACA +
Preference number: 4 (lower is better)
Translates to: WAVGIGTLHRDYMKLHFLGIDFT*PFPAQT
Trigger: TGTTTGGGCAGGAAAAGGCCAAGTGAAATCTATGCC...GAGGAAATGCAGTTTCATGTAATCCCTGTGAAGAGTGCCTATGCCCACAGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp ATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCCTTGGAGGATCACCTaGGCATGGACCTTCCTGTTT +
Preference number: 4 (lower is better)
Translates to: IYMVYVHVLHRPLAATLFPWRIT*AWTFLF
Trigger: AAACAGGAAGGTCCATGCCCAGGTGATCCTCCAAGG...GAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp ACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCCTCCAATAGTTTTGGCTTCTaGCTGTGCCAAGGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: TMFFKPSDVGEIVSISSSNSFGF*LCQGGD
Trigger: ATCTCCCCCTTGGCACAGCCAGAAGCCAAAACTATT...GGAGGAGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp CACATGCACCTTTGCCAAATCCTTCCCTCCAGTGGCTCAGATGCTTTTTCTATGCAGAAAGTACCCTTCTaGGACCACAAGCATCCAGAA +
Preference number: 4 (lower is better)
Translates to: HMHLCQILPSSGSDAFSMQKVPF*DHKHPE
Trigger: TTCTGGATGCTTGTGGTCCCAGAAGGGTACTTTCTG...CATAGAAAAAGCATCTGAGCCACTGGAGGGAAGGATTTGGCAAAGGTGCATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp AGAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCCAACCTGCTGGAGGTTaGGGGAATGAAAGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: RTTMFFKPSDVGEIVSISQPAGG*GNESQG
Trigger: TCCTTGACTTTCATTCCCCCAACCTCCAGCAGGTTG...GCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GATTTGGCTGGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACCAACCTGCTGGAGGTTaGGGGAATGAAAGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: DLAGQPCVFLGTSSKFSDQPAGG*GNESQG
Trigger: TCCTTGACTTTCATTCCCCCAACCTCCAGCAGGTTG...GTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCCAGCCAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp TGTCTTATTGTATTGAGAGAAGCAAGGAGGGCTGAAGAACGACAATGTTCTTTAAGCATCAGCTCCTCCTaGCCGGCAAGGTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: CLIVLREARRAEERQCSLSISSS*PARCCS
Trigger: TGAGCAGCACCTTGCCGGCCAGGAGGAGCTGATGCT...TAAAGAACATTGTCGTTCTTCAGCCCTCCTTGCTTCTCTCAATACAATAAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp ATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTCTTTACATTAAGATTTaGCTGGGCAGCCTTGTGTGT +
Preference number: 4 (lower is better)
Translates to: MVYVHVLHRPLAATLFLPLYIKI*LGSLVC
Trigger: ACACACAAGGCTGCCCAGCCAAATCTTAATGTAAAG...AGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TATTCCAGTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCTGGGTGTGGAGCAGTTaGACCACGGGGTGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: YSSEHWKVSKPCCLYHLFWVWSS*TTGCPR
Trigger: ACGAGGACACCCCGTGGTCCAACTGCTCCACACCCA...GAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCACTGGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CCA 90 bp CTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAATGGCTTGACTGTGGATaGGTGGCCTCTGGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LRVFAGITLAQHFPSKSQWLDCG*VASGFS
Trigger: TGAGAAACCAGAGGCCACCCATCCACAGTCAAGCCA...TTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646146.1
CDS-3UTR TCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGACATATTGGAAAAGATaGCGAAGTCCCAAAAGAACA +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALTYWKR*RSPKRT
Trigger: TGTTCTTTTGGGACTTCGTCATCTTTTCCAATATGT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456860.6
ENST00000529750.5
CDS-3UTR TCA 90 bp TATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGTCTTTGGAGTGCACATaGGTAATCAACAATGAGGCG +
Preference number: 4 (lower is better)
Translates to: YMVYVHVLHRPLAATLFLSLECT*VINNEA
Trigger: CGCCTCATTGTTGATTACTCATGTGCACTCCAAAGA...CAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GACTCTTTCATGAATCTCCACAAGCTCTGCCTGGAGCTGGTGGGACTCTTTTGGGAAGAAGTGCTTTTCTaGATCAGTGCAAACTTGGAT +
Preference number: 4 (lower is better)
Translates to: DSFMNLHKLCLELVGLFWEEVLF*ISANLD
Trigger: ATCCAAGTTTGCACTGATTCAGAAAAGCACTTCTTC...CCAAAAGAGTCCCACCAGCTCCAGGCAGAGCTTGTGGAGATTCATGAAAGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TTTCTGCTCTGCACTATGACAGCAAGCAGGGGCCTTAAAAGATGGCCTTCCAGGGAAGAAGTGCTTTTCTaGATCAGTGCAAACTTGGAT +
Preference number: 4 (lower is better)
Translates to: FLLCTMTASRGLKRWPSREEVLF*ISANLD
Trigger: ATCCAAGTTTGCACTGATTCAGAAAAGCACTTCTTC...CCTGGAAGGCCATCTTTTAAGGCCCCTGCTTGCTGTCATAGTGCAGAGCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp TGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGAAGAAGTGCTTTTCTaGATCAGTGCAAACTTGGAT +
Preference number: 4 (lower is better)
Translates to: WSMYMYCTGLLQPPCSCLEEVLF*ISANLD
Trigger: ATCCAAGTTTGCACTGATTCAGAAAAGCACTTCTTC...AAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp TACTTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTCAATCTTCTCCCCCATaGTGTTGTCAATGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: YFHGSSYFTLRFGWAALCQSSPP*CCQWRA
Trigger: AGCTCGCCATTGACAACATCATGGGGGAGAAGATTG...ACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp TATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGAGAAGTTCTTCTCGATaGACGTTTTCACTAACCCCC +
Preference number: 4 (lower is better)
Translates to: YMVYVHVLHRPLAATLFLRSSSR*TFSLTP
Trigger: GGGGGTTAGTGAAAACGTTCATCGAGAAGAACTTCT...CAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp TATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCATTTCACCTGTAATCTaGATTTTCCAGCTGCTACAG +
Preference number: 4 (lower is better)
Translates to: YGLCTCIAQASCSHPVPAISPVI*IFQLLQ
Trigger: CTGTAGCAGCTGGAAAATTCAGATTACAGGTGAAAT...GGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS-3UTR TCA 90 bp GACCTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCTGGTCCAATAGGCTGTaGTCCCTAACTACAGTTCCA +
Preference number: 4 (lower is better)
Translates to: DLRVFAGITLAQHFPSKSWSNRL*SLTTVP
Trigger: TGGAACTGTAGTTAGGGATCACAGCCTATTGGACCA...GCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS-3UTR TCA 90 bp GGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACCTTGCGCACCTTAAGACTTCTTTTTaGGACCTTAGGGTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: GQPCVFLGTSSKFSDLAHLKTSF*DLRVFA
Trigger: TGCGAAGACCCTAAGGTCTCAAAAAGAAGTCTTAAG...GTGCGCAAGGTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp AACCCCCAAGATGATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAAAGCATCCTCTCCATCTaGCACTCAGTACGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: NPQDDVKARTYLKDDLAQSILSI*HSVRSG
Trigger: TCCAGACCGTACTGAGTGTCAGATGGAGAGGATGCT...TTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATCATCTTGGGGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GAACCCTTTTTAAGTCATCCCAAAGGTCCCACCGTGGCACCTTTAATAATTAAAAGGAAGGTGCAGGGGTaGTGGAGGAGAGTATCCTTC +
Preference number: 4 (lower is better)
Translates to: EPFLSHPKGPTVAPLIIKRKVQG*WRRVSF
Trigger: GAAGGATACTCTCCTCCATCACCCCTGCACCTTCCT...TTTAATTATTAAAGGTGCCACGGTGGGACCTTTGGGATGACTTAAAAAGGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTAATGTTGGTTCGTTCAAAGATGCTGAAAAGGCCCTaGATGTCTCACTCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: VQTVSDSRLHWLMLVRSKMLKRP*MSHSLK
Trigger: CTTCAAAGAGTGAGACATTCAGGGCCTTTTCAGCAT...CTTTGAACGAACCAACATTAGCCAGTGGAGACGACTGTCTGAGACAGTTTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GGTTGGGGGAATGAAAGTCAAGGATGTCAAGGATGTCAAGTGGTGAATGGGATGATGCTGAAAAGGCCCTaGATGTCTCACTCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: GWGNESQGCQGCQVVNGMMLKRP*MSHSLK
Trigger: CTTCAAAGAGTGAGACATTCAGGGCCTTTTCAGCAT...CATCCCATTCACCACTTGACATCCTTGACATCCTTGACTTTCATTCCCCCAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GACCTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCGCTATGACTCTTTCATaGATCTCCACAAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: DLRVFAGITLAQHFPSKSAMTLS*ISTSSA
Trigger: GGCAGAGCTTGTGGAGATTCATGAAAGAGTCATAGC...GCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp ATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCTTCTGTCTTTTGGGCTaGTGTTCTGGGACATCTGGG +
Preference number: 4 (lower is better)
Translates to: IYMVYVHVLHRPLAATLFFCLLG*CSGTSG
Trigger: CCCAGATGTCCCAGAACATCAGCCCAAAAGACAGAA...GAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GCTCAGATGCTTTTTCTATGTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTGAAGTAGTGATGTTTTaGTGCTCCCTTGTAGACAGC +
Preference number: 4 (lower is better)
Translates to: AQMLFLCANCLRQSSPLAEVVMF*CSLVDS
Trigger: GCTGTCTACAAGGGAGCATCAAAACATCACTACTTC...AGCCAGTGGAGACGACTGTCTGAGACAGTTTGCACATAGAAAAAGCATCTGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTCTTCTAAGTGAATACTaGGCAATACATCAAGCTCGA +
Preference number: 4 (lower is better)
Translates to: WSMYMYCTGLLQPPCSCLLLSEY*AIHQAR
Trigger: TCGAGCTTGATGTATTGCTCAGTATTCACTTAGAAG...AAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GAACCCTTTTTAAGTCATCCCAAAGGTCCCACCGTGGCACCTTTAATAATTAAAGAGTGGTCTGGCCCTTaGGTGCAGGGTAGGAAAATG +
Preference number: 4 (lower is better)
Translates to: EPFLSHPKGPTVAPLIIKEWSGP*VQGRKM
Trigger: CATTTTCCTACCCTGCACTCAAGGGCCAGACCACTC...TTTAATTATTAAAGGTGCCACGGTGGGACCTTTGGGATGACTTAAAAAGGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGAACGAAGTGAAGAAGTaGTTTTCTGAATCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALNEVKK*FSESVQ
Trigger: TTGCACTGATTCAGAAAAGCACTTCTTCACTTCGTT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp TTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCGCTTGGTCTCTATGCTaGTCTTGGATGAGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: FIWSMYMYCTGLLQPPCSAWSLC*SWMSCH
Trigger: ATGACAGCTCATCCAAGAGCAGCATAGAGACCAAGC...GGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp AGAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCGCTTGGTCTCTATGCTaGTCTTGGATGAGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: RTTMFFKPSDVGEIVSISAWSLC*SWMSCH
Trigger: ATGACAGCTCATCCAAGAGCAGCATAGAGACCAAGC...GCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp TGTCTTATTGTATTGAGAGAAGCAAGGAGGGCTGAAGAACGACAATGTTCTTTATCAGAGAAGCGCCGCTaGTCCATGAAATCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: CLIVLREARRAEERQCSLSEKRR*SMKSRW
Trigger: CCAGCGGGATTTCATGGAGCAGCGGCGCTTCTCTGA...TAAAGAACATTGTCGTTCTTCAGCCCTCCTTGCTTCTCTCAATACAATAAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp TTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTCTCAGCCAAATAAGTaGTCTCCGTTTTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: FIWSMYMYCTGLLQPPCSSQPNK*SPFWPA
Trigger: AGCTGGCCAAAACGGAGAGCACTTATTTGGCTGAGA...GGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp CTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAACAGCCACCCTGTTCCTaGCTTGTCAATGATAGCGAT +
Preference number: 4 (lower is better)
Translates to: LRVFAGITLAQHFPSKSQQPPCS*LVNDSD
Trigger: ATCGCTATCATTGACAAGGCAGGAACAGGGTGGCTG...TTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp TATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGTCTATGTACATGTATTaGACAGGCCTCTTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: YMVYVHVLHRPLAATLFLSMYMY*TGLLQP
Trigger: TGGCTGCAAGAGGCCTGTGCAATACATGTACATAGA...CAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp GTACTAGCAGTAAGTTTTCTGACCTTGCGCACAGCGCCAGGCAAAGTACAGTTATCTATGTACATGTATTaGACAGGCCTCTTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: VLAVSFLTLRTAPGKVQLSMYMY*TGLLQP
Trigger: TGGCTGCAAGAGGCCTGTGCAATACATGTACATAGA...TAACTGTACTTTGCCTGGCGCTGTGCGCAAGGTCAGAAAACTTACTGCTAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp AACTCCCTGCGGCCAGGTCTGCTCTGTCACTTGACTCCCAACAAAGAACCCTTTAAGCACCTTAAGCAATaGCGTCTTAAGACTTCTTTT +
Preference number: 4 (lower is better)
Translates to: NSLRPGLLCHLTPNKEPFKHLKQ*RLKTSF
Trigger: AAAAGAAGTCTTAAGACGGCATTGCTTAAGGTGCTT...AAAGGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGACCTGGCCGCAGGGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp ATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTGATGCTTTTTCTATGTaGAAACTGTCTCAGACAGTC +
Preference number: 4 (lower is better)
Translates to: MVYVHVLHRPLAATLFLPDAFSM*KLSQTV
Trigger: GACTGTCTGAGACAGTTTGCACATAGAAAAAGCATC...AGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GAACCCTTTTTAAGTCATCCCAAAGGTCCCACCGTGGCACCTTTAATAATTAAAAATCTCCACAAGCTCTaGCTGGAGCTGGTGGGACTC +
Preference number: 4 (lower is better)
Translates to: EPFLSHPKGPTVAPLIIKNLHKL*LELVGL
Trigger: GAGTCCCACCAGCTCCAGGCAGAGCTTGTGGAGATT...TTTAATTATTAAAGGTGCCACGGTGGGACCTTTGGGATGACTTAAAAAGGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp TTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTCTGAAGACCTCTGCATaGCAAACTGGCTATGACTCT +
Preference number: 4 (lower is better)
Translates to: LYGLCTCIAQASCSHPVPLKTSA*QTGYDS
Trigger: AGAGTCATAGCCAGTTTGGCATGCAGAGGTCTTCAG...AGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp TGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTCAAAAACTGTAATTaGCACAGGGAATTAAAGGCC +
Preference number: 4 (lower is better)
Translates to: WSMYMYCTGLLQPPCSCLVKNCN*HRELKA
Trigger: GGCCTTTAATTCCCTGTGGCAATTACAGTTTTTGAC...AAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GACTCTTTCATGAATCTCCACAAGCTCTGCCTGGAGCTGGTGGGACTCTTTTGGGTCAAAAACTGTAATTaGCACAGGGAATTAAAGGCC +
Preference number: 4 (lower is better)
Translates to: DSFMNLHKLCLELVGLFWVKNCN*HRELKA
Trigger: GGCCTTTAATTCCCTGTGGCAATTACAGTTTTTGAC...CCAAAAGAGTCCCACCAGCTCCAGGCAGAGCTTGTGGAGATTCATGAAAGAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp TTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTAGATTTCCAGCAGTCTaGACCATGCCTCCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: LYGLCTCIAQASCSHPVPRFPAV*TMPPSL
Trigger: CAAAGAAGGAGGCATGGTGCAGACTGCTGGAAATCT...AGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATTGGCCAGGAATACAATaGTATTTATTTGTTTCACTC +
Preference number: 4 (lower is better)
Translates to: ASCLAWSRGHPFASAMSYWPGIQ*YLFVSL
Trigger: GAGTGAAACAAATAAATAGCATTGTATTCCTGGCCA...ATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GAACCCTTTTTAAGTCATCCCAAAGGTCCCACCGTGGCACCTTTAATAATTAAATGGGTCTCCTGGGAATaGAGACACTGCCCTACCACA +
Preference number: 4 (lower is better)
Translates to: EPFLSHPKGPTVAPLIIKWVSWE*RHCPTT
Trigger: TGTGGTAGGGCAGTGTCTGCATTCCCAGGAGACCCA...TTTAATTATTAAAGGTGCCACGGTGGGACCTTTGGGATGACTTAAAAAGGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTGGCCTTCCAGGAAAATaGTCCTCTCAGACCCAAAAT +
Preference number: 4 (lower is better)
Translates to: ERQCSLSLQMLGRSSASAGLPGK*SSQTQN
Trigger: ATTTTGGGTCTGAGAGGAGCATTTTCCTGGAAGGCC...AGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp ACAGTTATAGATCCAAATACAGATGGCCAGACAACTCGACTGCACTCGACCCGTCAGAGGCCACCCTTTTaGTTCTGCAATGTCTTATTG +
Preference number: 4 (lower is better)
Translates to: TVIDPNTDGQTTRLHSTRQRPPF*FCNVLL
Trigger: CAATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTG...ACGGGTCGAGTGCAGTCGAGTTGTCTGGCCATCTGTATTTGGATCTATAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp TATTCCAGTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCTGCGCTTCCTCGCTTaGTGGCGTCTTTGCCTTAGC +
Preference number: 4 (lower is better)
Translates to: YSSEHWKVSKPCCLYHLFLRFLA*WRLCLS
Trigger: GCTAAGGCAAAGACGCCAGCAAGCGAGGAAGCGCAG...GAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCACTGGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR GCA 90 bp GAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTTCTCACCCTCAGCCACTTaGGGAGGAGGAAGCGTTTTC +
Preference number: 4 (lower is better)
Translates to: EHWKVSKPCCLYHLFHFFSPSAT*GGGSVF
Trigger: GAAAACGCTTCCTCCTCCGCAAGTGGCTGAGGGTGA...GAAGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR GCA 90 bp GTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTTCACCCTCAGCCACTTaGGGAGGAGGAAGCGTTTTC +
Preference number: 4 (lower is better)
Translates to: VNTGKLVSHAVFTICSTSSPSAT*GGGSVF
Trigger: GAAAACGCTTCCTCCTCCGCAAGTGGCTGAGGGTGA...AGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR GCA 90 bp ATATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTGCTTTACAGCAGTGCTaGAAGAGACGGTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: IFIWSMYMYCTGLLQPPCALQQC*KRRSLA
Trigger: AGCCAGAGACCGTCTCTTGCAGCACTGCTGTAAAGC...ACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS-3UTR CCA 90 bp ACAGTTATAGATCCAAATACAGATGGCCAGACAACTCGACTGCACTCGACCCGTGAATCAGTGCAAACTTaGATGGCATTGGGAATGAGG +
Preference number: 4 (lower is better)
Translates to: TVIDPNTDGQTTRLHSTRESVQT*MALGMR
Trigger: CCTCATTCCCAATGCCATCCAAGTTTGCACTGATTC...ACGGGTCGAGTGCAGTCGAGTTGTCTGGCCATCTGTATTTGGATCTATAACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTAGTCCTCGTCATCACTaGTCAGGCCCAATTCGTTCC +
Preference number: 4 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVSPRHH*SGPIRS
Trigger: GGAACGAATTGGGCCTGACCAGTGATGACGAGGACT...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GAACCCTTTTTAAGTCATCCCAAAGGTCCCACCGTGGCACCTTTAATAATTAAATGGGCAGCTGTGGACTaGCATCTGGCTTGGTCTCTA +
Preference number: 4 (lower is better)
Translates to: EPFLSHPKGPTVAPLIIKWAAVD*HLAWSL
Trigger: TAGAGACCAAGCCAGATGCCAGTCCACAGCTGCCCA...TTTAATTATTAAAGGTGCCACGGTGGGACCTTTGGGATGACTTAAAAAGGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp ATATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTTTCTTGGGCAGCTGTaGACTGGCATCTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: IFIWSMYMYCTGLLQPPCFLGQL*TGIWLG
Trigger: ACCAAGCCAGATGCCAGTCCACAGCTGCCCAAGAAA...ACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTCCTTTTTCCATGGATaGAAGATGATATCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALSFFHG*KMISEK
Trigger: CTTCTCTGATATCATCTTCCATCCATGGAAAAAGGA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp TTCTATGTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTAATGTTGGTTCGTAAGTGCTCTCCGTTTTaGCCAGCTCGCTCTCTAAAT +
Preference number: 4 (lower is better)
Translates to: FYVQTVSDSRLHWLMLVRKCSPF*PARSLN
Trigger: ATTTAGAGAGCGAGCTGGCCAAAACGGAGAGCACTT...ACGAACCAACATTAGCCAGTGGAGACGACTGTCTGAGACAGTTTGCACATAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTAAGTGCTCTCCGTTTTaGCCAGCTCGCTCTCTAAAT +
Preference number: 4 (lower is better)
Translates to: LYGLCTCIAQASCSHPVPKCSPF*PARSLN
Trigger: ATTTAGAGAGCGAGCTGGCCAAAACGGAGAGCACTT...AGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp TTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCACATGTTTGATCCTGTaGCCCACATCCTCATCTGTG +
Preference number: 4 (lower is better)
Translates to: FIWSMYMYCTGLLQPPCSTCLIL*PTSSSV
Trigger: CACAGATGAGGATGTGGGCCACAGGATCAAACATGT...GGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTACATGTTTGATCCTGTaGCCCACATCCTCATCTGTG +
Preference number: 4 (lower is better)
Translates to: ERQCSLSLQMLGRSSASATCLIL*PTSSSV
Trigger: CACAGATGAGGATGTGGGCCACAGGATCAAACATGT...AGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp CTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAATCGTGGTACTTTTGTTaGGACTCTAAGAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LRVFAGITLAQHFPSKSQSWYFC*DSKSWA
Trigger: GGCCCAGCTCTTAGAGTCCCAACAAAAGTACCACGA...TTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GCTCAGATGCTTTTTCTATGTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTTGGAGCTCAGTATCGTaGTACTTTTGTTGGGACTCT +
Preference number: 4 (lower is better)
Translates to: AQMLFLCANCLRQSSPLAWSSVS*YFCWDS
Trigger: AGAGTCCCAACAAAAGTACCACGATACTGAGCTCCA...AGCCAGTGGAGACGACTGTCTGAGACAGTTTGCACATAGAAAAAGCATCTGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp AGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAAGAAACACAGAGCAAGGTGTaGGAGGGCTCCAAAAATGGA +
Preference number: 4 (lower is better)
Translates to: RVFAGITLAQHFPSKSQETQSKV*EGSKNG
Trigger: TCCATTTTTGGAGCCCTCCCACACCTTGCTCTGTGT...TTCTTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS-3UTR CCA 90 bp CTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAATCTAAAAGCCAAGAATaGCCAGCAAGGGAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: LRVFAGITLAQHFPSKSQSKSQE*PAREGV
Trigger: CACCCCTTCCCTTGCTGGCCATTCTTGGCTTTTAGA...TTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp AGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAAGAATCTAAAAGCCAAGAATaGCCAGCAAGGGAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: RVFAGITLAQHFPSKSQESKSQE*PAREGV
Trigger: CACCCCTTCCCTTGCTGGCCATTCTTGGCTTTTAGA...TTCTTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAACTCCCTCCTGTGTGCTGTTATTTGGTGTaGTCGTGCCGCCTTACAGAA +
Preference number: 4 (lower is better)
Translates to: DVKARTYLKDDLAQLPPVCCYLV*SCRLTE
Trigger: TTCTGTAAGGCGGCACGACCACACCAAATAACAGCA...CACAGGAGGGAGTTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529432.5
CDS-3UTR CCA 90 bp TATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGGAAAACGCTCCACCCTaGCTAATAAACAATGTGCTC +
Preference number: 4 (lower is better)
Translates to: YMVYVHVLHRPLAATLFLENAPP*LINNVL
Trigger: GAGCACATTGTTTATTAGCCAGGGTGGAGCGTTTTC...CAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp ATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCTCTGCCTGGAGCTGGTaGGACTCTTTTGGTCATTAC +
Preference number: 4 (lower is better)
Translates to: IYMVYVHVLHRPLAATLFSAWSW*DSFGHY
Trigger: GTAATGACCAAAAGAGTCCCACCAGCTCCAGGCAGA...GAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAACTCCCTCCTGTGAGGATCACCTGGGCATaGACCTTCCTGTTTTCTGAT +
Preference number: 4 (lower is better)
Translates to: DVKARTYLKDDLAQLPPVRITWA*TFLFSD
Trigger: ATCAGAAAACAGGAAGGTCCATGCCCAGGTGATCCT...CACAGGAGGGAGTTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTACAGAGCTTAGTCAATaGAAAAGTCAGGACCCAGGC +
Preference number: 4 (lower is better)
Translates to: LYGLCTCIAQASCSHPVPTELSQ*KSQDPG
Trigger: GCCTGGGTCCTGACTTTTCCATTGACTAAGCTCTGT...AGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGAAGAGCTTAAAGAAGTaGCATGGTATGACACAGAAA +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALKSLKK*HGMTQK
Trigger: TTTCTGTGTCATACCATGCCACTTCTTTAAGCTCTT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp ACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCCATGTCAAGTGGTGAATaGGATGATTGTCCCATAGCC +
Preference number: 4 (lower is better)
Translates to: TTMFFKPSDVGEIVSISSMSSGE*DDCPIA
Trigger: GGCTATGGGACAATCATCCCATTCACCACTTGACAT...GGAGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp ATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCTTTGGGAAGATGGTCTaGTCCATGCAGAGAGTGGTC +
Preference number: 4 (lower is better)
Translates to: IYMVYVHVLHRPLAATLFFGKMV*SMQRVV
Trigger: GACCACTCTCTGCATGGACCAGACCATCTTCCCAAA...GAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTGTTGGGGAAAAAGCACCATaGGTTTGGGAAGATGGTCTG +
Preference number: 4 (lower is better)
Translates to: FHGSSYFTLRFGWAALCVGEKAP*VWEDGL
Trigger: CAGACCATCTTCCCAAACCCATGGTGCTTTTTCCCC...AACACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp CACATGCACCTTTGCCAAATCCTTCCCTCCAGTGGCTCAGATGCTTTTTCTATGAGATCCAAATACAGATaGCCAGACAACTCGACTGCA +
Preference number: 4 (lower is better)
Translates to: HMHLCQILPSSGSDAFSMRSKYR*PDNSTA
Trigger: TGCAGTCGAGTTGTCTGGCCATCTGTATTTGGATCT...CATAGAAAAAGCATCTGAGCCACTGGAGGGAAGGATTTGGCAAAGGTGCATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACCTTGCGCACACATTAAGATTTGGCTaGGCAGCCTTGTGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: GQPCVFLGTSSKFSDLAHTLRFG*AALCVS
Trigger: AGAAACACACAAGGCTGCCCAGCCAAATCTTAATGT...GTGCGCAAGGTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp TTGAGTTGGGGAAAAAGCACCATGGGTTTGGGAAGATGGTCTGGTCCATGCAGAACATTAAGATTTGGCTaGGCAGCCTTGTGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: LSWGKSTMGLGRWSGPCRTLRFG*AALCVS
Trigger: AGAAACACACAAGGCTGCCCAGCCAAATCTTAATGT...TCTGCATGGACCAGACCATCTTCCCAAACCCATGGTGCTTTTTCCCCAACTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTTCCACACTCCCCAATCCTaGGGCCGAAGGAACAAGTTC +
Preference number: 4 (lower is better)
Translates to: EHWKVSKPCCLYHLFHFFHTPQS*GRRNKF
Trigger: GAACTTGTTCCTTCGGCCCCAGGATTGGGGAGTGTG...GAAGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CCA 90 bp TTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCTCTCCCCTCCGTGTaGTTCAATATAAAACACAGG +
Preference number: 4 (lower is better)
Translates to: LYGLCTCIAQASCSHPVPALPSV*FNIKHR
Trigger: CCTGTGTTTTATATTGAACCACACGGAGGGGAGAGC...AGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638086.1
3UTR CAA 72 bp TGGATGAGGAAGGGAGAGAGTCGCACCATGATTAGCTaGTCTGAGGCCAGTCTTGTCAATTCTTTCACAGTA +
Preference number: 4 (lower is better)
Translates to: WMRKGESRTMIS*SEASLVNSFTV
Trigger: TACTGTGAAAGAATTGACAAGACTGGCCTCAGACAAGCTAATCATGGTGCGACTCTCTCCCTTCCTCATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp CTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAAATGAGTAATCAACAATaGGGCGCTCCGTGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: LRVFAGITLAQHFPSKSQMSNQQ*GAPCLE
Trigger: TTCCAGACACGGAGCGCCTCATTGTTGATTACTCAT...TTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp ACCTTAAGCAATGCCGTCTTAAGACTTCTTTTTGAGACCTTAGGGTCTTCGCAGGGGCCCCAAACGAAGTaGAGAAGTGCTTTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: TLSNAVLRLLFETLGSSQGPQTK*RSAFLN
Trigger: ATTCAGAAAAGCACTTCTTCACTTCGTTTGGGGCCC...CTGCGAAGACCCTAAGGTCTCAAAAAGAAGTCTTAAGACGGCATTGCTTAAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTAATGTTGGTTCGTTCAAAGTATGCTGCTCTTGGATaGGCTGTCATTCACTTCATT +
Preference number: 4 (lower is better)
Translates to: VQTVSDSRLHWLMLVRSKYAALG*AVIHFI
Trigger: AATGAAGTGAATGACAGCTCATCCAAGAGCAGCATA...CTTTGAACGAACCAACATTAGCCAGTGGAGACGACTGTCTGAGACAGTTTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCAATCTTCTCCCCCATaGTGTTGTCAATGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVQSSPP*CCQWRA
Trigger: AGCTCGCCATTGACAACATCATGGGGGAGAAGATTG...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp ATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCTGTCCTCATTGTCATTaGAGTCCAGTGAAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: IYMVYVHVLHRPLAATLFCPHCH*SPVKGS
Trigger: ACTCCCCTTCACTGGACTTCAATGACAATGAGGACA...GAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTAGAAGTTCTTCTCGATaGACGTTTTCACTAACCCCC +
Preference number: 4 (lower is better)
Translates to: ERQCSLSLQMLGRSSASARSSSR*TFSLTP
Trigger: GGGGGTTAGTGAAAACGTTCATCGAGAAGAACTTCT...AGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GACCTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCGAATTCAAATCAGAATaGGAGGCACACAGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: DLRVFAGITLAQHFPSKSEFKSE*EAHRAR
Trigger: CCTTGCTCTGTGTGCCTCTCATTCTGATTTGAATTC...GCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS-3UTR TCA 90 bp AGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAAGAACGTGGGCATGGTTTATaGCTTTGCTTTCGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: RVFAGITLAQHFPSKSQERGHGL*LCFRSL
Trigger: AAGAGACCGAAAGCAAAGTCATAAACCATGCCCACG...TTCTTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS-3UTR TCA 90 bp TATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCTTAAGACTTCTTTTTaGGACCTTAGGGTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: YMVYVHVLHRPLAATLFLLKTSF*DLRVFA
Trigger: TGCGAAGACCCTAAGGTCTCAAAAAGAAGTCTTAAG...CAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp AGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAAGAAAAGGGGATTAGGGAATaGAGCACCTTAAGCAATGCC +
Preference number: 4 (lower is better)
Translates to: RVFAGITLAQHFPSKSQEKGIRE*STLSNA
Trigger: GGCATTGCTTAAGGTGCTTCATTCCCTAATCCCCTT...TTCTTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCGTTCAAAGAGCAAATaGGGCTGGCAACCCATCTTG +
Preference number: 4 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVRSKSK*GWQPIL
Trigger: CAAGATGGGTTGCCAGCCTCATTTGCTCTTTGAACG...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GCTCAGATGCTTTTTCTATGTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTTTCACAGGGATTACATaGAACTGCATTTCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: AQMLFLCANCLRQSSPLAFTGIT*NCISSH
Trigger: ATGGGAGGAAATGCAGTTTCATGTAATCCCTGTGAA...AGCCAGTGGAGACGACTGTCTGAGACAGTTTGCACATAGAAAAAGCATCTGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAACTCCCTCCTGTGGAAGTAGTGATGTTTTaGTGCTCCCTTGTAGACAGC +
Preference number: 4 (lower is better)
Translates to: DVKARTYLKDDLAQLPPVEVVMF*CSLVDS
Trigger: GCTGTCTACAAGGGAGCATCAAAACATCACTACTTC...CACAGGAGGGAGTTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTACAAAGCATTCCTCTTaGGCTCTCTTTGTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVTKHSS*ALFVLP
Trigger: GGGGAGGACAAAGAGAGCTCAAGAGGAATGCTTTGT...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp CTGTACTTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGAGAAGTGGCATGGTATaGCACAGAAAGTACCCTTCT +
Preference number: 4 (lower is better)
Translates to: LYFHGSSYFTLRFGWAALRSGMV*HRKYPS
Trigger: AGAAGGGTACTTTCTGTGTCATACCATGCCACTTCT...CAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAAGTACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp AACCCCCAAGATGATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAACCTTGGAGTCTAGGTTaGGTTGGGGAAAAAGCACCA +
Preference number: 4 (lower is better)
Translates to: NPQDDVKARTYLKDDLAQPWSLG*VGEKAP
Trigger: TGGTGCTTTTTCCCCAACTCAACCTAGACTCCAAGG...TTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATCATCTTGGGGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTTCCGTGTCTGGAAGCTaGTTAAAGAGCTTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: ERQCSLSLQMLGRSSASASVSGS*LKSFLK
Trigger: CTTCAGAAAGCTCTTTAAGCAGCTTCCAGACACGGA...AGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTTCAAGGAGAGCATTCTaGCAGAGCCGGAACATCATC +
Preference number: 4 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVSRRAF*QSRNII
Trigger: GATGATGTTCCGGCTCTGGCAGAATGCTCTCCTTGA...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp ATATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTCTGGCTTGGTCTCTATaGTGCTCTTGGATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: IFIWSMYMYCTGLLQPPCLAWSL*CSWMSC
Trigger: ACAGCTCATCCAAGAGCAGCATAGAGACCAAGCCAG...ACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp AGAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCTATGTACATGTATTaGACAGGCCTCTTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: RTTMFFKPSDVGEIVSISSMYMY*TGLLQP
Trigger: TGGCTGCAAGAGGCCTGTGCAATACATGTACATAGA...GCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GAACCCTTTTTAAGTCATCCCAAAGGTCCCACCGTGGCACCTTTAATAATTAAAGGCAACCCATCTTGGTaGTCACCACTCACAGTGTTC +
Preference number: 4 (lower is better)
Translates to: EPFLSHPKGPTVAPLIIKGNPSW*SPLTVF
Trigger: GAACACTGTGAGTGGTGAGCACCAAGATGGGTTGCC...TTTAATTATTAAAGGTGCCACGGTGGGACCTTTGGGATGACTTAAAAAGGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GTACTAGCAGTAAGTTTTCTGACCTTGCGCACAGCGCCAGGCAAAGTACAGTTACTCCAGTGGCTCAGATaGTTTTTCTATGTGCAAACT +
Preference number: 4 (lower is better)
Translates to: VLAVSFLTLRTAPGKVQLLQWLR*FFYVQT
Trigger: AGTTTGCACATAGAAAAAGCATCTGAGCCACTGGAG...TAACTGTACTTTGCCTGGCGCTGTGCGCAAGGTCAGAAAACTTACTGCTAGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAACTCCCTCCTGTGAAACACATGCACCTTTaGCAAATCCTTCCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: DVKARTYLKDDLAQLPPVKHMHL*QILPSS
Trigger: ACTGGAGGGAAGGATTTGGCAAAGGTGCATGTGTTT...CACAGGAGGGAGTTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GGTTGGGGGAATGAAAGTCAAGGATGTCAAGGATGTCAAGTGGTGAATGGGATGGTGAATTCAGATAAATaGATGGTGCTAGTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: GWGNESQGCQGCQVVNGMVNSDK*MVLVGQ
Trigger: TTGGCCCACTAGCACCATGCATTTATCTGAATTCAC...CATCCCATTCACCACTTGACATCCTTGACATCCTTGACTTTCATTCCCCCAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GTACTAGCAGTAAGTTTTCTGACCTTGCGCACAGCGCCAGGCAAAGTACAGTTAGTGAATTCAGATAAATaGATGGTGCTAGTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: VLAVSFLTLRTAPGKVQLVNSDK*MVLVGQ
Trigger: TTGGCCCACTAGCACCATGCATTTATCTGAATTCAC...TAACTGTACTTTGCCTGGCGCTGTGCGCAAGGTCAGAAAACTTACTGCTAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp ACCTTAAGCAATGCCGTCTTAAGACTTCTTTTTGAGACCTTAGGGTCTTCGCAGCTGAAGACCTCTGCATaGCAAACTGGCTATGACTCT +
Preference number: 4 (lower is better)
Translates to: TLSNAVLRLLFETLGSSQLKTSA*QTGYDS
Trigger: AGAGTCATAGCCAGTTTGGCATGCAGAGGTCTTCAG...CTGCGAAGACCCTAAGGTCTCAAAAAGAAGTCTTAAGACGGCATTGCTTAAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GAACCCTTTTTAAGTCATCCCAAAGGTCCCACCGTGGCACCTTTAATAATTAAAATCTGGGGTTTCTTCTaGCCCTGTGTCAAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: EPFLSHPKGPTVAPLIIKIWGFF*PCVKKP
Trigger: GGGCTTCTTGACACAGGGGCAGAAGAAACCCCAGAT...TTTAATTATTAAAGGTGCCACGGTGGGACCTTTGGGATGACTTAAAAAGGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp TACTTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTAGATTTCCAGCAGTCTaGACCATGCCTCCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: YFHGSSYFTLRFGWAALCRFPAV*TMPPSL
Trigger: CAAAGAAGGAGGCATGGTGCAGACTGCTGGAAATCT...ACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTGGCCAGGAATACAATaGTATTTATTTGTTTCACTC +
Preference number: 4 (lower is better)
Translates to: GLCTCIAQASCSHPVPALWPGIQ*YLFVSL
Trigger: GAGTGAAACAAATAAATAGCATTGTATTCCTGGCCA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp TTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTGTTGGCCTTCCAGGAAAATaGTCCTCTCAGACCCAAAAT +
Preference number: 4 (lower is better)
Translates to: FHGSSYFTLRFGWAALCVGLPGK*SSQTQN
Trigger: ATTTTGGGTCTGAGAGGAGCATTTTCCTGGAAGGCC...AACACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp GAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCAGAGGCCACCCTTTTaGTTCTGCAATGTCTTATTG +
Preference number: 4 (lower is better)
Translates to: ERQCSLSLQMLGRSSASAQRPPF*FCNVLL
Trigger: CAATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTG...AGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp CATGCTGTCTTTACCATTTGTTCCACTTCTTCCTTCCTAGGGTTTAAGGAGAAGAAACTCTCAGCGGTTTaGGTTCAGCAGACCAGGTTG +
Preference number: 4 (lower is better)
Translates to: HAVFTICSTSSFLGFKEKKLSAV*VQQTRL
Trigger: CAACCTGGTCTGCTGAACGCAAACCGCTGAGAGTTT...CTTCTCCTTAAACCCTAGGAAGGAAGAAGTGGAACAAATGGTAAAGACAGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR GCA 90 bp AAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTTCCTTCCTAGGTTGTTTTTCTTCCGCTaGGCTTCCTCGCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: KVSKPCCLYHLFHFFLPRLFFFR*ASSLAG
Trigger: GCCAGCAAGCGAGGAAGCGCAGCGGAAGAAAAACAA...CCTAGGAAGGAAGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR GCA 90 bp GAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTTCTTGTTTTTCTTCCGCTaGGCTTCCTCGCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: EHWKVSKPCCLYHLFHFFLFFFR*ASSLAG
Trigger: GCCAGCAAGCGAGGAAGCGCAGCGGAAGAAAAACAA...GAAGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CCA 90 bp ATATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTAACTCTGGCTTTTCTTaGAATTCTTGCCGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: IFIWSMYMYCTGLLQPPCNSGFS*NSCRRS
Trigger: GGAGCGGCGGCAAGAATTCCAAGAAAAGCCAGAGTT...ACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR CCA 90 bp TTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTTGGAGCTCAGTATCGTaGTACTTTTGTTGGGACTCT +
Preference number: 4 (lower is better)
Translates to: LYGLCTCIAQASCSHPVPWSSVS*YFCWDS
Trigger: AGAGTCCCAACAAAAGTACCACGATACTGAGCTCCA...AGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp AGAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTGGAGCTCAGTATCGTaGTACTTTTGTTGGGACTCT +
Preference number: 4 (lower is better)
Translates to: RTTMFFKPSDVGEIVSISWSSVS*YFCWDS
Trigger: AGAGTCCCAACAAAAGTACCACGATACTGAGCTCCA...GCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp ATATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTAGCGAGTCCTTCATCTaGTCAAGGAGCATCACTGAG +
Preference number: 4 (lower is better)
Translates to: IFIWSMYMYCTGLLQPPCSESFI*SRSITE
Trigger: CTCAGTGATGCTCCTTGACCAGATGAAGGACTCGCT...ACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp AGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAAGAACTGAGCTCGTGGGCATaGTTTATGACTTTGCTTTCG +
Preference number: 4 (lower is better)
Translates to: RVFAGITLAQHFPSKSQELSSWA*FMTLLS
Trigger: CGAAAGCAAAGTCATAAACCATGCCCACGAGCTCAG...TTCTTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS-3UTR CCA 90 bp CTGTACTTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGCAGAGAGAAAGCGGGTaGGAAAGTAAGAAATTCCCA +
Preference number: 4 (lower is better)
Translates to: LYFHGSSYFTLRFGWAALQRESG*ESKKFP
Trigger: TGGGAATTTCTTACTTTCCCACCCGCTTTCTCTCTG...CAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAAGTACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAACTCCCTCCTGTGGAAAACGCTCCACCCTaGCTAATAAACAATGTGCTC +
Preference number: 4 (lower is better)
Translates to: DVKARTYLKDDLAQLPPVENAPP*LINNVL
Trigger: GAGCACATTGTTTATTAGCCAGGGTGGAGCGTTTTC...CACAGGAGGGAGTTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp CTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAAGACAGTCGTCTCCACTaGCTAATGTTGGTTCGTTCA +
Preference number: 4 (lower is better)
Translates to: LRVFAGITLAQHFPSKSQDSRLH*LMLVRS
Trigger: TGAACGAACCAACATTAGCCAGTGGAGACGACTGTC...TTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp ACCTTAAGCAATGCCGTCTTAAGACTTCTTTTTGAGACCTTAGGGTCTTCGCAGGACAGTCGTCTCCACTaGCTAATGTTGGTTCGTTCA +
Preference number: 4 (lower is better)
Translates to: TLSNAVLRLLFETLGSSQDSRLH*LMLVRS
Trigger: TGAACGAACCAACATTAGCCAGTGGAGACGACTGTC...CTGCGAAGACCCTAAGGTCTCAAAAAGAAGTCTTAAGACGGCATTGCTTAAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGGCATAGATTTCACTTaGCCTTTTCCTGCCCAAACA +
Preference number: 4 (lower is better)
Translates to: LYGLCTCIAQASCSHPVPGIDFT*PFPAQT
Trigger: TGTTTGGGCAGGAAAAGGCCAAGTGAAATCTATGCC...AGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TGTCTTATTGTATTGAGAGAAGCAAGGAGGGCTGAAGAACGACAATGTTCTTTAGATCTTACACCTCTGTaGGGCCAGAGACCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: CLIVLREARRAEERQCSLDLTPL*GQRPEQ
Trigger: CTGCTCTGGTCTCTGGCCCCACAGAGGTGTAAGATC...TAAAGAACATTGTCGTTCTTCAGCCCTCCTTGCTTCTCTCAATACAATAAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TACTTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTAGGATCACCTGGGCATaGACCTTCCTGTTTTCTGAT +
Preference number: 4 (lower is better)
Translates to: YFHGSSYFTLRFGWAALCRITWA*TFLFSD
Trigger: ATCAGAAAACAGGAAGGTCCATGCCCAGGTGATCCT...ACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp AACCCCCAAGATGATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAACACACCTCTAAATACTaGGAAGCTTCAGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: NPQDDVKARTYLKDDLAQHTSKY*EASASG
Trigger: CCCAGAGGCTGAAGCTTCCCAGTATTTAGAGGTGTG...TTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATCATCTTGGGGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTATGTCAAGTGGTGAATaGGATGATTGTCCCATAGCC +
Preference number: 4 (lower is better)
Translates to: ERQCSLSLQMLGRSSASAMSSGE*DDCPIA
Trigger: GGCTATGGGACAATCATCCCATTCACCACTTGACAT...AGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp TATTCCAGTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACACTCCCCAATCCTaGGGCCGAAGGAACAAGTTC +
Preference number: 4 (lower is better)
Translates to: YSSEHWKVSKPCCLYHLFHTPQS*GRRNKF
Trigger: GAACTTGTTCCTTCGGCCCCAGGATTGGGGAGTGTG...GAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCACTGGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
3UTR CAA 72 bp ATCCACTTCTCACAAAGCATTCCTCTTGAGCTCTCTTaGTCCTCCCCATGTCATTCCAGGTTCTTAGTGTCA +
Preference number: 4 (lower is better)
Translates to: IHFSQSIPLELS*SSPCHSRFLVS
Trigger: TGACACTAAGAACCTGGAATGACATGGGGAGGACAAAGAGAGCTCAAGAGGAATGCTTTGTGAGAAGTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTATGAGTAATCAACAATaGGGCGCTCCGTGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVMSNQQ*GAPCLE
Trigger: TTCCAGACACGGAGCGCCTCATTGTTGATTACTCAT...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp ATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCTCTTTGGAGTGCACATaGGTAATCAACAATGAGGCG +
Preference number: 4 (lower is better)
Translates to: IYMVYVHVLHRPLAATLFSLECT*VINNEA
Trigger: CGCCTCATTGTTGATTACTCATGTGCACTCCAAAGA...GAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp ATATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTGTCCTCATTGTCATTaGAGTCCAGTGAAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: IFIWSMYMYCTGLLQPPCCPHCH*SPVKGS
Trigger: ACTCCCCTTCACTGGACTTCAATGACAATGAGGACA...ACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTTGTCCTCATTGTCATTaGAGTCCAGTGAAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVCPHCH*SPVKGS
Trigger: ACTCCCCTTCACTGGACTTCAATGACAATGAGGACA...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp ACCTTAAGCAATGCCGTCTTAAGACTTCTTTTTGAGACCTTAGGGTCTTCGCAGGTCAAGGAGCATCACTaGGGATTTGATGATTTCCCT +
Preference number: 4 (lower is better)
Translates to: TLSNAVLRLLFETLGSSQVKEHH*GFDDFP
Trigger: AGGGAAATCATCAAATCCTCAGTGATGCTCCTTGAC...CTGCGAAGACCCTAAGGTCTCAAAAAGAAGTCTTAAGACGGCATTGCTTAAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp CTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAAAGCCTATTTCTACCATaGTGTCAATACCTACTCCCC +
Preference number: 4 (lower is better)
Translates to: LRVFAGITLAQHFPSKSQSLFLP*CQYLLP
Trigger: GGGGAGTAGGTATTGACATCATGGTAGAAATAGGCT...TTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS-3UTR TCA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTTTAGGCACTAAAAAGTaGCACTTCGCCCAGATCCAG +
Preference number: 4 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVLGTKK*HFAQIQ
Trigger: CTGGATCTGGGCGAAGTGTCACTTTTTAGTGCCTAA...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TACTTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTATGCTGAAAAGGCCCTaGATGTCTCACTCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: YFHGSSYFTLRFGWAALCMLKRP*MSHSLK
Trigger: CTTCAAAGAGTGAGACATTCAGGGCCTTTTCAGCAT...ACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp ATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCACAGTAGTTAGTGTATaGGGGATGATGAATGTGCCC +
Preference number: 4 (lower is better)
Translates to: IYMVYVHVLHRPLAATLFTVVSV*GMMNVP
Trigger: GGGCACATTCATCATCCCTCATACACTAACTACTGT...GAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GACCTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCAAGAATAAGCAAGACTaGAGACCTCTGCATGCCAAA +
Preference number: 4 (lower is better)
Translates to: DLRVFAGITLAQHFPSKSKNKQD*RPLHAK
Trigger: TTTGGCATGCAGAGGTCTTCAGTCTTGCTTATTCTT...GCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TGGGCTGTGGGCATAGGCACTCTTCACAGGGATTACATGAAACTGCATTTCCTCTATCTTTGGGGTAGATaGGTGATAAAATCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: WAVGIGTLHRDYMKLHFLYLWGR*VIKSSV
Trigger: GACAGAAGATTTTATCACTCATCTACCCCAAAGATA...GAGGAAATGCAGTTTCATGTAATCCCTGTGAAGAGTGCCTATGCCCACAGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TTCTATGTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTAATGTTGGTTCGTTTCACAGGGATTACATaGAACTGCATTTCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: FYVQTVSDSRLHWLMLVRFTGIT*NCISSH
Trigger: ATGGGAGGAAATGCAGTTTCATGTAATCCCTGTGAA...ACGAACCAACATTAGCCAGTGGAGACGACTGTCTGAGACAGTTTGCACATAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp GATTTGGCTGGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACACTTATCTGCAAGGGTaGGTTAAGATGTCTTTCGCA +
Preference number: 4 (lower is better)
Translates to: DLAGQPCVFLGTSSKFSDTYLQG*VKMSFA
Trigger: TGCGAAAGACATCTTAACTCACCCTTGCAGATAAGT...GTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCCAGCCAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp ACCTTAAGCAATGCCGTCTTAAGACTTCTTTTTGAGACCTTAGGGTCTTCGCAGGAAGTAGTGATGTTTTaGTGCTCCCTTGTAGACAGC +
Preference number: 4 (lower is better)
Translates to: TLSNAVLRLLFETLGSSQEVVMF*CSLVDS
Trigger: GCTGTCTACAAGGGAGCATCAAAACATCACTACTTC...CTGCGAAGACCCTAAGGTCTCAAAAAGAAGTCTTAAGACGGCATTGCTTAAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TTCTATGTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTAATGTTGGTTCGTGAAGATGAGCTCCATTaGAAAGAATGTTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: FYVQTVSDSRLHWLMLVREDELH*KECSSP
Trigger: GGGAGAAGAACATTCTTTTCAATGGAGCTCATCTTC...ACGAACCAACATTAGCCAGTGGAGACGACTGTCTGAGACAGTTTGCACATAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTGTTAGAAGTGGCATGGTATaGCACAGAAAGTACCCTTCT +
Preference number: 4 (lower is better)
Translates to: FHGSSYFTLRFGWAALCVRSGMV*HRKYPS
Trigger: AGAAGGGTACTTTCTGTGTCATACCATGCCACTTCT...AACACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GCATCTTCTAGAAGAAAACACAGAGGTGAAGAGGATTGGGGCCAACCTGCTGGAAACGAAGTGAAGAAGTaGTTTTCTGAATCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: ASSRRKHRGEEDWGQPAGNEVKK*FSESVQ
Trigger: TTGCACTGATTCAGAAAAGCACTTCTTCACTTCGTT...TCCAGCAGGTTGGCCCCAATCCTCTTCACCTCTGTGTTTTCTTCTAGAAGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp ATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCAACGAAGTGAAGAAGTaGTTTTCTGAATCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: IWSMYMYCTGLLQPPCSCNEVKK*FSESVQ
Trigger: TTGCACTGATTCAGAAAAGCACTTCTTCACTTCGTT...GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR GCA 90 bp CTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAAAAACACATGCACCTTTaGCAAATCCTTCCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: LRVFAGITLAQHFPSKSQKHMHL*QILPSS
Trigger: ACTGGAGGGAAGGATTTGGCAAAGGTGCATGTGTTT...TTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp TGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGGAATCTACAAGTTTTaGATTCAAAACTTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: WSMYMYCTGLLQPPCSCLGIYKF*IQNFLG
Trigger: TCCCAGAAAGTTTTGAATGCAAAACTTGTAGATTCC...AAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp ACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCCACTCCAAGACTTATCTaGAAGGGTGAGTTAAGATGT +
Preference number: 4 (lower is better)
Translates to: TTMFFKPSDVGEIVSISSTPRLI*KGELRC
Trigger: ACATCTTAACTCACCCTTGCAGATAAGTCTTGGAGT...GGAGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GAGTATTCCAGTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGAAACTCTCAGCGGTTTaGGTTCAGCAGACCAGGTTG +
Preference number: 4 (lower is better)
Translates to: EYSSEHWKVSKPCCLYHLKLSAV*VQQTRL
Trigger: CAACCTGGTCTGCTGAACGCAAACCGCTGAGAGTTT...CAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCACTGGAATACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR GCA 90 bp TCAACAAACATCTATAGATCTATAGATCACTGTAAGAGGTCAGGTACAGTGCTGTTGAGCTGCTTTCACTaGACTCCTTCCGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: STNIYRSIDHCKRSGTVLLSCFH*TPSAPS
Trigger: TGAGGGAGCGGAAGGAGTGCAGTGAAAGCAGCTCAA...CAGCACTGTACCTGACCTCTTACAGTGATCTATAGATCTATAGATGTTTGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533341.3
CDS-3UTR CCA 90 bp TGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTACATTATACCAACTCTaGCTTTTCTTGGAATTCTTG +
Preference number: 4 (lower is better)
Translates to: WSMYMYCTGLLQPPCSCLTLYQL*LFLEFL
Trigger: CAAGAATTCCAAGAAAAGCCAGAGTTGGTATAATGT...AAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR CCA 90 bp TATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCACATTATACCAACTCTaGCTTTTCTTGGAATTCTTG +
Preference number: 4 (lower is better)
Translates to: YGLCTCIAQASCSHPVPATLYQL*LFLEFL
Trigger: CAAGAATTCCAAGAAAAGCCAGAGTTGGTATAATGT...GGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR CCA 90 bp ACCTTAAGCAATGCCGTCTTAAGACTTCTTTTTGAGACCTTAGGGTCTTCGCAGGAATCAGTGCAAACTTaGATGGCATTGGGAATGAGG +
Preference number: 4 (lower is better)
Translates to: TLSNAVLRLLFETLGSSQESVQT*MALGMR
Trigger: CCTCATTCCCAATGCCATCCAAGTTTGCACTGATTC...CTGCGAAGACCCTAAGGTCTCAAAAAGAAGTCTTAAGACGGCATTGCTTAAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTGTTGAATCAGTGCAAACTTaGATGGCATTGGGAATGAGG +
Preference number: 4 (lower is better)
Translates to: FHGSSYFTLRFGWAALCVESVQT*MALGMR
Trigger: CCTCATTCCCAATGCCATCCAAGTTTGCACTGATTC...AACACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAACTCCCTCCTGTGTCTCTATGCTGCTCTTaGATGAGCTGTCATTCACTT +
Preference number: 4 (lower is better)
Translates to: DVKARTYLKDDLAQLPPVSLCCS*MSCHSL
Trigger: AAGTGAATGACAGCTCATCCAAGAGCAGCATAGAGA...CACAGGAGGGAGTTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTTCTCTATGCTGCTCTTaGATGAGCTGTCATTCACTT +
Preference number: 4 (lower is better)
Translates to: LYGLCTCIAQASCSHPVPSLCCS*MSCHSL
Trigger: AAGTGAATGACAGCTCATCCAAGAGCAGCATAGAGA...AGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp ATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCTCCTTTTTCCATGGATaGAAGATGATATCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: IWSMYMYCTGLLQPPCSCSFFHG*KMISEK
Trigger: CTTCTCTGATATCATCTTCCATCCATGGAAAAAGGA...GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GAACCCTTTTTAAGTCATCCCAAAGGTCCCACCGTGGCACCTTTAATAATTAAACCTAGGAGTTTAGACTaGGCTCCCTTGATGCTTCTG +
Preference number: 4 (lower is better)
Translates to: EPFLSHPKGPTVAPLIIKPRSLD*APLMLL
Trigger: CAGAAGCATCAAGGGAGCCCAGTCTAAACTCCTAGG...TTTAATTATTAAAGGTGCCACGGTGGGACCTTTGGGATGACTTAAAAAGGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp ATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTAATAAAAGCACTGGCTaGAAGAAGTTACATAAGAAG +
Preference number: 4 (lower is better)
Translates to: MVYVHVLHRPLAATLFLPNKSTG*KKLHKK
Trigger: CTTCTTATGTAACTTCTTCCAGCCAGTGCTTTTATT...AGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCAGGGTAGGAAAATGTaGGGAGCCACAAGCTATTGT +
Preference number: 4 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVQGRKM*GATSYC
Trigger: ACAATAGCTTGTGGCTCCCCACATTTTCCTACCCTG...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TACTTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTAGATCCAAATACAGATaGCCAGACAACTCGACTGCA +
Preference number: 4 (lower is better)
Translates to: YFHGSSYFTLRFGWAALCRSKYR*PDNSTA
Trigger: TGCAGTCGAGTTGTCTGGCCATCTGTATTTGGATCT...ACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GACCTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCACATTAAGATTTGGCTaGGCAGCCTTGTGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: DLRVFAGITLAQHFPSKSTLRFG*AALCVS
Trigger: AGAAACACACAAGGCTGCCCAGCCAAATCTTAATGT...GCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TTCTATGTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTAATGTTGGTTCGTCTTTACATTAAGATTTaGCTGGGCAGCCTTGTGTGT +
Preference number: 4 (lower is better)
Translates to: FYVQTVSDSRLHWLMLVRLYIKI*LGSLVC
Trigger: ACACACAAGGCTGCCCAGCCAAATCTTAATGTAAAG...ACGAACCAACATTAGCCAGTGGAGACGACTGTCTGAGACAGTTTGCACATAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
3UTR CAA 72 bp CTGGCTGGAAGAAGTTACATAAGAAGTAGTGATGTTTaGATGCTCCCTTGTAGACAGCAACTAGCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: LAGRSYIRSSDV*MLPCRQQLARQ
Trigger: TTGCCTGGCTAGTTGCTGTCTACAAGGGAGCATCAAAACATCACTACTTCTTATGTAACTTCTTCCAGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp AACCCCCAAGATGATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAATCTTTGGAGTGCACATaGGTAATCAACAATGAGGCG +
Preference number: 4 (lower is better)
Translates to: NPQDDVKARTYLKDDLAQSLECT*VINNEA
Trigger: CGCCTCATTGTTGATTACTCATGTGCACTCCAAAGA...TTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATCATCTTGGGGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp CTGTACTTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGGAAGAAGTGCTTTTCTaGATCAGTGCAAACTTGGAT +
Preference number: 4 (lower is better)
Translates to: LYFHGSSYFTLRFGWAALEEVLF*ISANLD
Trigger: ATCCAAGTTTGCACTGATTCAGAAAAGCACTTCTTC...CAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAAGTACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTGTCAAGGAGCATCACTaGGGATTTGATGATTTCCCT +
Preference number: 4 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVVKEHH*GFDDFP
Trigger: AGGGAAATCATCAAATCCTCAGTGATGCTCCTTGAC...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTAATGTTGGTTCGTTCAAAGTATCTTTGGGGTAGATaGGTGATAAAATCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: VQTVSDSRLHWLMLVRSKYLWGR*VIKSSV
Trigger: GACAGAAGATTTTATCACTCATCTACCCCAAAGATA...CTTTGAACGAACCAACATTAGCCAGTGGAGACGACTGTCTGAGACAGTTTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp AACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTTCCAGGGAAAGTGATCAATaGCTCAGTTGCTCCGCACAA +
Preference number: 4 (lower is better)
Translates to: NTGKLVSHAVFTICSTSSRESDQ*LSCSAQ
Trigger: TTGTGCGGAGCAACTGAGTCATTGATCACTTTCCCT...GGAAGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640939.1
CDS-3UTR GCA 90 bp ACAGTTATAGATCCAAATACAGATGGCCAGACAACTCGACTGCACTCGACCCGTAACGAAGTGAAGAAGTaGTTTTCTGAATCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: TVIDPNTDGQTTRLHSTRNEVKK*FSESVQ
Trigger: TTGCACTGATTCAGAAAAGCACTTCTTCACTTCGTT...ACGGGTCGAGTGCAGTCGAGTTGTCTGGCCATCTGTATTTGGATCTATAACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp ATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCACTACTTCTGGAAGTTaGCTAAACCCAAAGAATGGG +
Preference number: 4 (lower is better)
Translates to: IYMVYVHVLHRPLAATLFTTSGS*LNPKNG
Trigger: CCCATTCTTTGGGTTTAGGCAACTTCCAGAAGTAGT...GAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS-3UTR GCA 90 bp GATTTGGCTGGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACGATGCTTTTTCTATGTaGAAACTGTCTCAGACAGTC +
Preference number: 4 (lower is better)
Translates to: DLAGQPCVFLGTSSKFSDDAFSM*KLSQTV
Trigger: GACTGTCTGAGACAGTTTGCACATAGAAAAAGCATC...GTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCCAGCCAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp ATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCGGAATCTACAAGTTTTaGATTCAAAACTTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: IWSMYMYCTGLLQPPCSCGIYKF*IQNFLG
Trigger: TCCCAGAAAGTTTTGAATGCAAAACTTGTAGATTCC...GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp TGTCTTATTGTATTGAGAGAAGCAAGGAGGGCTGAAGAACGACAATGTTCTTTAAGGGCTGGCTTTGGCTaGCCTGAAGAGCTTAAAGAA +
Preference number: 4 (lower is better)
Translates to: CLIVLREARRAEERQCSLRAGFG*PEELKE
Trigger: TTCTTTAAGCTCTTCAGGGCAGCCAAAGCCAGCCCT...TAAAGAACATTGTCGTTCTTCAGCCCTCCTTGCTTCTCTCAATACAATAAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp TCCAGTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACAGAGGTCAGGTACAGTaGTGTGACGATACAAAGATG +
Preference number: 4 (lower is better)
Translates to: SSEHWKVSKPCCLYHLFHRGQVQ*CDDTKM
Trigger: CATCTTTGTATCGTCACAGCACTGTACCTGACCTCT...GTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCACTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CCA 90 bp GCATCTTCTAGAAGAAAACACAGAGGTGAAGAGGATTGGGGCCAACCTGCTGGAACATTATACCAACTCTaGCTTTTCTTGGAATTCTTG +
Preference number: 4 (lower is better)
Translates to: ASSRRKHRGEEDWGQPAGTLYQL*LFLEFL
Trigger: CAAGAATTCCAAGAAAAGCCAGAGTTGGTATAATGT...TCCAGCAGGTTGGCCCCAATCCTCTTCACCTCTGTGTTTTCTTCTAGAAGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000638157.1
CDS-3UTR CCA 90 bp ACAGTTATAGATCCAAATACAGATGGCCAGACAACTCGACTGCACTCGACCCGTTCCTTTTTCCATGGATaGAAGATGATATCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: TVIDPNTDGQTTRLHSTRSFFHG*KMISEK
Trigger: CTTCTCTGATATCATCTTCCATCCATGGAAAAAGGA...ACGGGTCGAGTGCAGTCGAGTTGTCTGGCCATCTGTATTTGGATCTATAACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp ATATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTGGAGCTCAGTATCGTaGTACTTTTGTTGGGACTCT +
Preference number: 4 (lower is better)
Translates to: IFIWSMYMYCTGLLQPPCWSSVS*YFCWDS
Trigger: AGAGTCCCAACAAAAGTACCACGATACTGAGCTCCA...ACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CCA 90 bp GAACCCTTTTTAAGTCATCCCAAAGGTCCCACCGTGGCACCTTTAATAATTAAAGACAGTCGTCTCCACTaGCTAATGTTGGTTCGTTCA +
Preference number: 4 (lower is better)
Translates to: EPFLSHPKGPTVAPLIIKDSRLH*LMLVRS
Trigger: TGAACGAACCAACATTAGCCAGTGGAGACGACTGTC...TTTAATTATTAAAGGTGCCACGGTGGGACCTTTGGGATGACTTAAAAAGGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GAACCCTTTTTAAGTCATCCCAAAGGTCCCACCGTGGCACCTTTAATAATTAAAAGGATCACCTGGGCATaGACCTTCCTGTTTTCTGAT +
Preference number: 4 (lower is better)
Translates to: EPFLSHPKGPTVAPLIIKRITWA*TFLFSD
Trigger: ATCAGAAAACAGGAAGGTCCATGCCCAGGTGATCCT...TTTAATTATTAAAGGTGCCACGGTGGGACCTTTGGGATGACTTAAAAAGGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GAACCCTTTTTAAGTCATCCCAAAGGTCCCACCGTGGCACCTTTAATAATTAAAAATAGTTTTGGCTTCTaGCTGTGCCAAGGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: EPFLSHPKGPTVAPLIIKNSFGF*LCQGGD
Trigger: ATCTCCCCCTTGGCACAGCCAGAAGCCAAAACTATT...TTTAATTATTAAAGGTGCCACGGTGGGACCTTTGGGATGACTTAAAAAGGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp GATTTGGCTGGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACCTTAAAGAAGTGGCATaGTATGACACAGAAAGTACC +
Preference number: 4 (lower is better)
Translates to: DLAGQPCVFLGTSSKFSDLKEVA*YDTEST
Trigger: GGTACTTTCTGTGTCATACCATGCCACTTCTTTAAG...GTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCCAGCCAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TGTCTTATTGTATTGAGAGAAGCAAGGAGGGCTGAAGAACGACAATGTTCTTTATTTGGGAAGATGGTCTaGTCCATGCAGAGAGTGGTC +
Preference number: 4 (lower is better)
Translates to: CLIVLREARRAEERQCSLFGKMV*SMQRVV
Trigger: GACCACTCTCTGCATGGACCAGACCATCTTCCCAAA...TAAAGAACATTGTCGTTCTTCAGCCCTCCTTGCTTCTCTCAATACAATAAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp TGTCTTATTGTATTGAGAGAAGCAAGGAGGGCTGAAGAACGACAATGTTCTTTAGGGGAAAAAGCACCATaGGTTTGGGAAGATGGTCTG +
Preference number: 4 (lower is better)
Translates to: CLIVLREARRAEERQCSLGEKAP*VWEDGL
Trigger: CAGACCATCTTCCCAAACCCATGGTGCTTTTTCCCC...TAAAGAACATTGTCGTTCTTCAGCCCTCCTTGCTTCTCTCAATACAATAAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp AGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAAGAAGAAGAAGTGCTTTTCTaGATCAGTGCAAACTTGGAT +
Preference number: 4 (lower is better)
Translates to: RVFAGITLAQHFPSKSQEEEVLF*ISANLD
Trigger: ATCCAAGTTTGCACTGATTCAGAAAAGCACTTCTTC...TTCTTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TGTCTTATTGTATTGAGAGAAGCAAGGAGGGCTGAAGAACGACAATGTTCTTTAGGGCCCCAAACGAAGTaGAGAAGTGCTTTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: CLIVLREARRAEERQCSLGPQTK*RSAFLN
Trigger: ATTCAGAAAAGCACTTCTTCACTTCGTTTGGGGCCC...TAAAGAACATTGTCGTTCTTCAGCCCTCCTTGCTTCTCTCAATACAATAAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp GAACCCTTTTTAAGTCATCCCAAAGGTCCCACCGTGGCACCTTTAATAATTAAAAGAAGTTCTTCTCGATaGACGTTTTCACTAACCCCC +
Preference number: 4 (lower is better)
Translates to: EPFLSHPKGPTVAPLIIKRSSSR*TFSLTP
Trigger: GGGGGTTAGTGAAAACGTTCATCGAGAAGAACTTCT...TTTAATTATTAAAGGTGCCACGGTGGGACCTTTGGGATGACTTAAAAAGGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTAAGAATAAGCAAGACTaGAGACCTCTGCATGCCAAA +
Preference number: 4 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVKNKQD*RPLHAK
Trigger: TTTGGCATGCAGAGGTCTTCAGTCTTGCTTATTCTT...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp AACCCCCAAGATGATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAATCTTTCGCAAGCTATTaGCTAAGGGGGAAGAGATTT +
Preference number: 4 (lower is better)
Translates to: NPQDDVKARTYLKDDLAQSFASY*LRGKRF
Trigger: AAATCTCTTCCCCCTTAGTCAATAGCTTGCGAAAGA...TTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATCATCTTGGGGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTAGAAACCCTTCTAAGTaGATACTGAGCAATACATCA +
Preference number: 4 (lower is better)
Translates to: LYGLCTCIAQASCSHPVPRNPSK*ILSNTS
Trigger: TGATGTATTGCTCAGTATTCACTTAGAAGGGTTTCT...AGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TTCTATGTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTAATGTTGGTTCGTAGAAACCCTTCTAAGTaGATACTGAGCAATACATCA +
Preference number: 4 (lower is better)
Translates to: FYVQTVSDSRLHWLMLVRRNPSK*ILSNTS
Trigger: TGATGTATTGCTCAGTATTCACTTAGAAGGGTTTCT...ACGAACCAACATTAGCCAGTGGAGACGACTGTCTGAGACAGTTTGCACATAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp ATCACTGTAAGAGGTCAGGTACAGTGCTGTGACGATACAAAGATGAACATGATTTTCAACTTTGTGCAGTaGAAATCCGCAAGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: ITVRGQVQCCDDTKMNMIFNFVQ*KSASLS
Trigger: GCTCAAGCTTGCGGATTTTCACTGCACAAAGTTGAA...AATCATGTTCATCTTTGTATCGTCACAGCACTGTACCTGACCTCTTACAGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533341.3
CDS-3UTR TCA 90 bp CCAGTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTTCAACTTTGTGCAGTaGAAATCCGCAAGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: PVNTGKLVSHAVFTICSTFNFVQ*KSASLS
Trigger: ACTCAAGCTTGCGGATTTTCACTGCACAAAGTTGAA...AGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640939.1
CDS-3UTR GCA 90 bp GACCTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCAAGCACCTTAAGCAATaGCGTCTTAAGACTTCTTTT +
Preference number: 4 (lower is better)
Translates to: DLRVFAGITLAQHFPSKSKHLKQ*RLKTSF
Trigger: AAAAGAAGTCTTAAGACGGCATTGCTTAAGGTGCTT...GCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp ATCACTGTAAGAGGTCAGGTACAGTGCTGTGACGATACAAAGATGAACATGATTAGAGGTCAGGTACAGTaGTGTGACGATACAAAGATG +
Preference number: 4 (lower is better)
Translates to: ITVRGQVQCCDDTKMNMIRGQVQ*CDDTKM
Trigger: CATCTTTGTATCGTCACAGCACTGTACCTGACCTCT...AATCATGTTCATCTTTGTATCGTCACAGCACTGTACCTGACCTCTTACAGTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CCA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTTTCTCTGCTTGTAGGTaGGGCTTAACACATTATACC +
Preference number: 4 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVFSACR*GLTHYT
Trigger: GGTATAATGTGTTAAGCCCCACCTACAAGCAGAGAA...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR CCA 90 bp TGTCTTATTGTATTGAGAGAAGCAAGGAGGGCTGAAGAACGACAATGTTCTTTAAAGTGCTCTCCGTTTTaGCCAGCTCGCTCTCTAAAT +
Preference number: 4 (lower is better)
Translates to: CLIVLREARRAEERQCSLKCSPF*PARSLN
Trigger: ATTTAGAGAGCGAGCTGGCCAAAACGGAGAGCACTT...TAAAGAACATTGTCGTTCTTCAGCCCTCCTTGCTTCTCTCAATACAATAAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CCA 90 bp ATATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTGTCTCTTTCTTTTGCTaGGATGCACACCATTTCCTT +
Preference number: 4 (lower is better)
Translates to: IFIWSMYMYCTGLLQPPCVSFFC*DAHHFL
Trigger: AAGGAAATGGTGTGCATCCCAGCAAAAGAAAGAGAC...ACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS-3UTR CCA 90 bp TTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTGTTCTTAAAGAAGTGGCATaGTATGACACAGAAAGTACC +
Preference number: 4 (lower is better)
Translates to: FHGSSYFTLRFGWAALCVLKEVA*YDTEST
Trigger: GGTACTTTCTGTGTCATACCATGCCACTTCTTTAAG...AACACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp CTGTACTTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGAAGAGCTTAAAGAAGTaGCATGGTATGACACAGAAA +
Preference number: 4 (lower is better)
Translates to: LYFHGSSYFTLRFGWAALKSLKK*HGMTQK
Trigger: TTTCTGTGTCATACCATGCCACTTCTTTAAGCTCTT...CAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAAGTACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TGTCTTATTGTATTGAGAGAAGCAAGGAGGGCTGAAGAACGACAATGTTCTTTAGAGTCTAGGTTGAGTTaGGGAAAAAGCACCATGGGT +
Preference number: 4 (lower is better)
Translates to: CLIVLREARRAEERQCSLESRLS*GKSTMG
Trigger: ACCCATGGTGCTTTTTCCCCAACTCAACCTAGACTC...TAAAGAACATTGTCGTTCTTCAGCCCTCCTTGCTTCTCTCAATACAATAAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR TCA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCTTCTAAGTGAATACTaGGCAATACATCAAGCTCGA +
Preference number: 4 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVLLSEY*AIHQAR
Trigger: TCGAGCTTGATGTATTGCTCAGTATTCACTTAGAAG...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR TCA 90 bp TGTCTTATTGTATTGAGAGAAGCAAGGAGGGCTGAAGAACGACAATGTTCTTTAAGAAGCAAGGAGGGCTaGAGAACGACAATGTTCTTT +
Preference number: 4 (lower is better)
Translates to: CLIVLREARRAEERQCSLRSKEG*RTTMFF
Trigger: AAAGAACATTGTCGTTCTTCAGCCCTCCTTGCTTCT...TAAAGAACATTGTCGTTCTTCAGCCCTCCTTGCTTCTCTCAATACAATAAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR GCA 90 bp CTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAAAACGAAGTGAAGAAGTaGTTTTCTGAATCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: LRVFAGITLAQHFPSKSQNEVKK*FSESVQ
Trigger: TTGCACTGATTCAGAAAAGCACTTCTTCACTTCGTT...TTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp ACCTTAAGCAATGCCGTCTTAAGACTTCTTTTTGAGACCTTAGGGTCTTCGCAGAAGCACCTTAAGCAATaGCGTCTTAAGACTTCTTTT +
Preference number: 4 (lower is better)
Translates to: TLSNAVLRLLFETLGSSQKHLKQ*RLKTSF
Trigger: AAAAGAAGTCTTAAGACGGCATTGCTTAAGGTGCTT...CTGCGAAGACCCTAAGGTCTCAAAAAGAAGTCTTAAGACGGCATTGCTTAAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp ATATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTACTCCAAGACTTATCTaGAAGGGTGAGTTAAGATGT +
Preference number: 4 (lower is better)
Translates to: IFIWSMYMYCTGLLQPPCTPRLI*KGELRC
Trigger: ACATCTTAACTCACCCTTGCAGATAAGTCTTGGAGT...ACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp GATTTGGCTGGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACTGGCCAGGAATACAATaGTATTTATTTGTTTCACTC +
Preference number: 4 (lower is better)
Translates to: DLAGQPCVFLGTSSKFSDWPGIQ*YLFVSL
Trigger: GAGTGAAACAAATAAATAGCATTGTATTCCTGGCCA...GTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCCAGCCAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp AGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAAGAAGAACGTAGACTAATCTaGAAGAATCAGTGTACAGAA +
Preference number: 4 (lower is better)
Translates to: RVFAGITLAQHFPSKSQEERRLI*KNQCTE
Trigger: TTCTGTACACTGATTCTTCCAGATTAGTCTACGTTC...TTCTTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS-3UTR CCA 90 bp TGTCTTATTGTATTGAGAGAAGCAAGGAGGGCTGAAGAACGACAATGTTCTTTAGGCATAGATTTCACTTaGCCTTTTCCTGCCCAAACA +
Preference number: 4 (lower is better)
Translates to: CLIVLREARRAEERQCSLGIDFT*PFPAQT
Trigger: TGTTTGGGCAGGAAAAGGCCAAGTGAAATCTATGCC...TAAAGAACATTGTCGTTCTTCAGCCCTCCTTGCTTCTCTCAATACAATAAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR GCA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTAAGCACCTTAAGCAATaGCGTCTTAAGACTTCTTTT +
Preference number: 4 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVKHLKQ*RLKTSF
Trigger: AAAAGAAGTCTTAAGACGGCATTGCTTAAGGTGCTT...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp AACCCCCAAGATGATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAATCCTTTTTCCATGGATaGAAGATGATATCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: NPQDDVKARTYLKDDLAQSFFHG*KMISEK
Trigger: CTTCTCTGATATCATCTTCCATCCATGGAAAAAGGA...TTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATCATCTTGGGGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TTTACCATTTGTTCCACTTCTTCCTTCCTAGGGTTTAAGGAGAAGAAAAGGGTCGAACATGATTGGTCTTaGAGTATTCCAGTGAACACT +
Preference number: 4 (lower is better)
Translates to: FTICSTSSFLGFKEKKRVEHDWS*SIPVNT
Trigger: AGTGTTCACTGGAATACTCCAAGACCAATCATGTTC...GACCCTTTTCTTCTCCTTAAACCCTAGGAAGGAAGAAGTGGAACAAATGGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CCA 90 bp CCAGTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTAAAGATGAACATGATTaGTCTTGGAGTATTCCAGTG +
Preference number: 4 (lower is better)
Translates to: PVNTGKLVSHAVFTICSTKDEHD*SWSIPV
Trigger: CACTGGAATACTCCAAGACCAATCATGTTCATCTTT...AGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCACTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CCA 90 bp TCCAGTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACAAAGATGAACATGATTaGTCTTGGAGTATTCCAGTG +
Preference number: 4 (lower is better)
Translates to: SSEHWKVSKPCCLYHLFHKDEHD*SWSIPV
Trigger: CACTGGAATACTCCAAGACCAATCATGTTCATCTTT...GTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCACTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR GCA 90 bp ATATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTGGAATCTACAAGTTTTaGATTCAAAACTTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: IFIWSMYMYCTGLLQPPCGIYKF*IQNFLG
Trigger: TCCCAGAAAGTTTTGAATGCAAAACTTGTAGATTCC...ACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CCA 90 bp TCAACAAACATCTATAGATCTATAGATCACTGTAAGAGGTCAGGTACAGTGCTGGAACATGATTGGTCTTaGAGTATTCCAGTGAACACT +
Preference number: 4 (lower is better)
Translates to: STNIYRSIDHCKRSGTVLEHDWS*SIPVNT
Trigger: AGTGTTCACTGGAATACTCCAAGACCAATCATGTTC...CAGCACTGTACCTGACCTCTTACAGTGATCTATAGATCTATAGATGTTTGTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR GCA 90 bp GTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTATATTTTCAACTTTGTaGAGTGAAAATCCGCAAGCT +
Preference number: 4 (lower is better)
Translates to: VNTGKLVSHAVFTICSTSIFSTL*SENPQA
Trigger: AGCTTGCGGATTTTCACTGCACAAAGTTGAAAATAT...AGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR GCA 90 bp TGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTTCCTTCCTATATTTTCAACTTTGTaGAGTGAAAATCCGCAAGCT +
Preference number: 4 (lower is better)
Translates to: WKVSKPCCLYHLFHFFLPIFSTL*SENPQA
Trigger: AGCTTGCGGATTTTCACTGCACAAAGTTGAAAATAT...AGGAAGGAAGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR GCA 90 bp GTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTAAAGTTAGTAAGCCATaGTGTCTTTACCATTTGTTC +
Preference number: 4 (lower is better)
Translates to: VNTGKLVSHAVFTICSTSKVSKP*CLYHLF
Trigger: GAACAAATGGTAAAGACAGCATGGCTTACTAACTTT...AGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR GCA 90 bp TGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTTCCTTCCTAAAGTTAGTAAGCCATaGTGTCTTTACCATTTGTTC +
Preference number: 4 (lower is better)
Translates to: WKVSKPCCLYHLFHFFLPKVSKP*CLYHLF
Trigger: GAACAAATGGTAAAGACAGCATGGCTTACTAACTTT...AGGAAGGAAGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CCA 90 bp GAACCCTTTTTAAGTCATCCCAAAGGTCCCACCGTGGCACCTTTAATAATTAAAAATAAAAGCACTGGCTaGAAGAAGTTACATAAGAAG +
Preference number: 4 (lower is better)
Translates to: EPFLSHPKGPTVAPLIIKNKSTG*KKLHKK
Trigger: CTTCTTATGTAACTTCTTCCAGCCAGTGCTTTTATT...TTTAATTATTAAAGGTGCCACGGTGGGACCTTTGGGATGACTTAAAAAGGGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS GCA 90 bp GCCGGCGGCGAAGCGTGGGGGTCGACGAACTGGACCAGACCGGGCTaGCCTCGGGCGCACCCTGCGGCTCGGGCACCTGCAGGGCGGGCA +
Preference number: 5 (lower is better)
Translates to: AGGEAWGSTNWTRPG*PRAHPAARAPAGRA
Trigger: TGCCCGCCCTGCAGGTGCCCGAGCCGCAGGGTGCGCCCGAGGGCAGCCCGGTCTGGTCCAGTTCGTCGACCCCCACGCTTCGCCGCCGGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000533341.3
ENST00000635736.2
ENST00000640939.1
CDS GCA 90 bp GGGGTCGACGAACTGGACCAGACCGGGCTGCCCTCGGGCGCACCCTaGGGCTCGGGCACCTGCAGGGCGGGCAGCGGCCGGTTCTCCATC +
Preference number: 5 (lower is better)
Translates to: GVDELDQTGLPSGAP*GSGTCRAGSGRFSI
Trigger: GATGGAGAACCGGCCGCTGCCCGCCCTGCAGGTGCCCGAGCCGCAGGGTGCGCCCGAGGGCAGCCCGGTCTGGTCCAGTTCGTCGACCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000533341.3
ENST00000635736.2
ENST00000640939.1
CDS GCA 90 bp CCGGTTCTCCATCATGTTGGCCGCCGGCATGGGGGCCGTCGCCTCTaGGCTCCCCCTGAGCCCTCCGCCAGCGGCCTGGTTCGCGTCTCC +
Preference number: 5 (lower is better)
Translates to: PVLHHVGRRHGGRRL*APPEPSASGLVRVS
Trigger: GGAGACGCGAACCAGGCCGCTGGCGGAGGGCTCAGGGGGAGCGCAGAGGCGACGGCCCCCATGCCGGCGGCCAACATGATGGAGAACCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000533341.3
ENST00000635736.2
ENST00000640939.1
CDS GCA 90 bp CCGGTTCGGGCGCGCGGCGGTCAGCGGCGTCCACGGCACACCAGCTaGTGGCTACTGCTCACCACGTCTCCCCGCGAGCCTGGCTTTGCA +
Preference number: 5 (lower is better)
Translates to: PVRARGGQRRPRHTS*WLLLTTSPREPGFA
Trigger: TGCAAAGCCAGGCTCGCGGGGAGACGTGGTGAGCAGTAGCCAGCAGCTGGTGTGCCGTGGACGCCGCTGACCGCCGCGCGCCCGAACCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS GCA 90 bp GGGGTGTCCTCGTCGCTGGAGGGCGTGATCTCGATGGACGGCAGCTaGAGGAACTCCTTGCCGGGGGCCAAGACGGCGGGCAGGTCCCGG +
Preference number: 5 (lower is better)
Translates to: GVSSSLEGVISMDGS*RNSLPGAKTAGRSR
Trigger: CCGGGACCTGCCCGCCGTCTTGGCCCCCGGCAAGGAGTTCCTGCAGCTGCCGTCCATCGAGATCACGCCCTCCAGCGACGAGGACACCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000533341.3
ENST00000635736.2
ENST00000640939.1
CDS CCA 90 bp GTTCGGGCGCGCGGCGGTCAGCGGCGTCCACGGCACACCAGCTGCTaGCTACTGCTCACCACGTCTCCCCGCGAGCCTGGCTTTGCAAAG +
Preference number: 5 (lower is better)
Translates to: VRARGGQRRPRHTSC*LLLTTSPREPGFAK
Trigger: CTTTGCAAAGCCAGGCTCGCGGGGAGACGTGGTGAGCAGTAGCCAGCAGCTGGTGTGCCGTGGACGCCGCTGACCGCCGCGCGCCCGAAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS GCA 90 bp CGCGCGGCGGTCAGCGGCGTCCACGGCACACCAGCTGCTGGCTACTaGTCACCACGTCTCCCCGCGAGCCTGGCTTTGCAAAGAGGAGAG +
Preference number: 5 (lower is better)
Translates to: RAAVSGVHGTPAAGY*SPRLPASLALQRGE
Trigger: CTCTCCTCTTTGCAAAGCCAGGCTCGCGGGGAGACGTGGTGAGCAGTAGCCAGCAGCTGGTGTGCCGTGGACGCCGCTGACCGCCGCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS CCA 90 bp CGTCCTGGTTCTGCGGGGTTGGCGAGCGAGACCGCTTCCGGAGGATaGGCGAGCAGGCCGGCGTGCTGCGGTTGGAGTTACTGGCAGTGC +
Preference number: 5 (lower is better)
Translates to: RPGSAGLASETASGG*ASRPACCGWSYWQC
Trigger: GCACTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGCCCATCCTCCGGAAGCGGTCTCGCTCGCCAACCCCGCAGAACCAGGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000322282.11
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000534764.1
ENST00000632815.1
ENST00000633087.1
ENST00000633646.1
ENST00000635736.2
ENST00000638157.1
CDS GCA 90 bp GCGAGCGAGACCGCTTCCGGAGGATGGGCGAGCAGGCCGGCGTGCTaGGGTTGGAGTTACTGGCAGTGCTTTCTTCCCGCGCTCGAGGAC +
Preference number: 5 (lower is better)
Translates to: ASETASGGWASRPAC*GWSYWQCFLPALED
Trigger: GTCCTCGAGCGCGGGAAGAAAGCACTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGCCCATCCTCCGGAAGCGGTCTCGCTCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000633087.1
ENST00000633646.1
ENST00000635736.2
ENST00000638157.1
CDS CCA 90 bp CGTCCTGGTTCTGCGGGGTTGGCGAGCGAGACCGCTTCCGGAGGATaGGCGAGCAGGCCGGCGTGCTGCGGTTGGAGTTACTGGCAGTGT +
Preference number: 5 (lower is better)
Translates to: RPGSAGLASETASGG*ASRPACCGWSYWQC
Trigger: ACACTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGCCCATCCTCCGGAAGCGGTCTCGCTCGCCAACCCCGCAGAACCAGGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS TCA 90 bp GTGTGGAGCAGTTGGACCACGGGGTGTCCTCGTCGCTGGAGGGCGTaGTCTCGATGGACGGCAGCTGCAGGAACTCCTTGCCGGGGGCCA +
Preference number: 5 (lower is better)
Translates to: VWSSWTTGCPRRWRA*SRWTAAAGTPCRGP
Trigger: TGGCCCCCGGCAAGGAGTTCCTGCAGCTGCCGTCCATCGAGATCACGCCCTCCAGCGACGAGGACACCCCGTGGTCCAACTGCTCCACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000533341.3
ENST00000635736.2
ENST00000640939.1
CDS GCA 90 bp GCGAGCGAGACCGCTTCCGGAGGATGGGCGAGCAGGCCGGCGTGCTaGGGTTGGAGTTACTGGCAGTGCTCCATGACCATCCCAAAGCCC +
Preference number: 5 (lower is better)
Translates to: ASETASGGWASRPAC*GWSYWQCSMTIPKP
Trigger: GGGCTTTGGGATGGTCATGGAGCACTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGCCCATCCTCCGGAAGCGGTCTCGCTCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529432.5
ENST00000532581.5
CDS GCA 90 bp TTGGCGAGCGAGACCGCTTCCGGAGGATGGGCGAGCAGGCCGGCGTaGTGCGGTTGGAGTTACTGGCAGTGCTTTCTTCCCGCGCTCGAG +
Preference number: 5 (lower is better)
Translates to: LASETASGGWASRPA*CGWSYWQCFLPALE
Trigger: CTCGAGCGCGGGAAGAAAGCACTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGCCCATCCTCCGGAAGCGGTCTCGCTCGCCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000633087.1
ENST00000633646.1
ENST00000635736.2
ENST00000638157.1
CDS GCA 90 bp GCGAGCGAGACCGCTTCCGGAGGATGGGCGAGCAGGCCGGCGTGCTaGGGTTGGAGTTACTGGCAGTGTTGGCTCGCAGAAAGGCCAGCT +
Preference number: 5 (lower is better)
Translates to: ASETASGGWASRPAC*GWSYWQCWLAERPA
Trigger: AGCTGGCCTTTCTGCGAGCCAACACTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGCCCATCCTCCGGAAGCGGTCTCGCTCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS TCA 90 bp TCCTCATCTGTGGGCGTGGTGACCGGGCTCATCACCTCTTCCAGGTaGGGGACTCGCAGGTGGGCATGGGGACGCTTCCTCCTCCGCACC +
Preference number: 5 (lower is better)
Translates to: SSSVGVVTGLITSSR*GTRRWAWGRFLLRT
Trigger: GGTGCGGAGGAGGAAGCGTCCCCATGCCCACCTGCGAGTCCCTCACCTGGAAGAGGTGATGAGCCCGGTCACCACGCCCACAGATGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000322282.11
ENST00000450171.2
ENST00000456860.6
ENST00000525945.1
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS TCA 90 bp CGGCCTCCAGGCTCTGCTCCTGTACGTTCTTCATGCGGCGCATCTTaGAGCGCCGGCGGCGAAGCGTGGGGGTCGACGAACTGGACCAGA +
Preference number: 5 (lower is better)
Translates to: RPPGSAPVRSSCGAS*SAGGEAWGSTNWTR
Trigger: TCTGGTCCAGTTCGTCGACCCCCACGCTTCGCCGCCGGCGCTTCAAGATGCGCCGCATGAAGAACGTACAGGAGCAGAGCCTGGAGGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000533341.3
ENST00000635736.2
ENST00000640939.1
CDS GCA 90 bp TTGGCGAGCGAGACCGCTTCCGGAGGATGGGCGAGCAGGCCGGCGTaGTGCGGTTGGAGTTACTGGCAGTGTTGGCTCGCAGAAAGGCCA +
Preference number: 5 (lower is better)
Translates to: LASETASGGWASRPA*CGWSYWQCWLAERP
Trigger: TGGCCTTTCTGCGAGCCAACACTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGCCCATCCTCCGGAAGCGGTCTCGCTCGCCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS CCA 90 bp TCTCCCCGCGAGCCTGGCTTTGCAAAGAGGAGAGCCAGTCCCATCTaGAGGAGGGGAGGAGGAGCGCGGAGCCTGAGGACACCCAAACCC +
Preference number: 5 (lower is better)
Translates to: SPREPGFAKRRASPI*RRGGGARSLRTPKP
Trigger: GGGTTTGGGTGTCCTCAGGCTCCGCGCTCCTCCTCCCCTCCTCCAGATGGGACTGGCTCTCCTCTTTGCAAAGCCAGGCTCGCGGGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS GCA 90 bp TTGGCGAGCGAGACCGCTTCCGGAGGATGGGCGAGCAGGCCGGCGTaGTGCGGTTGGAGTTACTGGCAGTGCTCCATGACCATCCCAAAG +
Preference number: 5 (lower is better)
Translates to: LASETASGGWASRPA*CGWSYWQCSMTIPK
Trigger: CTTTGGGATGGTCATGGAGCACTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGCCCATCCTCCGGAAGCGGTCTCGCTCGCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529432.5
ENST00000532581.5
CDS GCA 90 bp GCGAGCGAGACCGCTTCCGGAGGATGGGCGAGCAGGCCGGCGTGCTaGGGTTGGAGTTACTGGCAGTGCTGGAAGCCATTAGGTAGGAAC +
Preference number: 5 (lower is better)
Translates to: ASETASGGWASRPAC*GWSYWQCWKPLGRN
Trigger: GTTCCTACCTAATGGCTTCCAGCACTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGCCCATCCTCCGGAAGCGGTCTCGCTCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534764.1
CDS GCA 90 bp TTGGCGAGCGAGACCGCTTCCGGAGGATGGGCGAGCAGGCCGGCGTaGTGCGGTTGGAGTTACTGGCAGTGCTGGAAGCCATTAGGTAGG +
Preference number: 5 (lower is better)
Translates to: LASETASGGWASRPA*CGWSYWQCWKPLGR
Trigger: CCTACCTAATGGCTTCCAGCACTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGCCCATCCTCCGGAAGCGGTCTCGCTCGCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534764.1
CDS CCA 90 bp GGCGGTGCAGCAAACTCTCAGCGGTTTGCGTTCAGCAGACCAGGTTaGGGAGCCGGCTTGGCGCTGCAGGGAGGTAGAGAGCGGGAGGAA +
Preference number: 5 (lower is better)
Translates to: GGAANSQRFAFSRPG*GAGLALQGGREREE
Trigger: TTCCTCCCGCTCTCTACCTCCCTGCAGCGCCAAGCCGGCTCCCCAACCTGGTCTGCTGAACGCAAACCGCTGAGAGTTTGCTGCACCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000635736.2
CDS CCA 90 bp GTCTCTGGCTGTAGATTCTGCACCATGCTGGGCTCAGGGGAGGGCTaGCCACATGGCAGCTGGGACCTCAAGGGCTGGGGGCTCACTCTG +
Preference number: 5 (lower is better)
Translates to: VSGCRFCTMLGSGEG*PHGSWDLKGWGLTL
Trigger: CAGAGTGAGCCCCCAGCCCTTGAGGTCCCAGCTGCCATGTGGCCAGCCCTCCCCTGAGCCCAGCATGGTGCAGAATCTACAGCCAGAGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS CCA 90 bp GCACACCAGCTGCTGGCTACTGCTCACCACGTCTCCCCGCGAGCCTaGCTTTGCAAAGAGGAGAGCCAGTCCCATCTGGAGGAGGGGAGG +
Preference number: 5 (lower is better)
Translates to: AHQLLATAHHVSPRA*LCKEESQSHLEEGR
Trigger: CCTCCCCTCCTCCAGATGGGACTGGCTCTCCTCTTTGCAAAGCCAGGCTCGCGGGGAGACGTGGTGAGCAGTAGCCAGCAGCTGGTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS-3UTR CAA 90 bp TCTGTGGGTAGACCCTGCACCCCGGACGTGGCAAGGGCCTTCTCTCCCTCTCTCACCCTGAGTCGGCTCTaGTTCCGAGCCACACGGGTG +
Preference number: 5 (lower is better)
Translates to: SVGRPCTPDVARAFSPSLTLSRL*FRATRV
Trigger: CACCCGTGTGGCTCGGAACAAGAGCCGACTCAGGGT...GAGAGAGGGAGAGAAGGCCCTTGCCACGTCCGGGGTGCAGGGTCTACCCACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS GCA 90 bp CCGTGCCAGCAACGGTGTTCAGCGGCAGCAGGTGCATGGCCAAGCTaGTTCAGGTACCACTGCAGCAGCTGGCTCTCCTGCTCCAGCAGA +
Preference number: 5 (lower is better)
Translates to: PCQQRCSAAAGAWPS*FRYHCSSWLSCSSR
Trigger: TCTGCTGGAGCAGGAGAGCCAGCTGCTGCAGTGGTACCTGAAGCAGCTTGGCCATGCACCTGCTGCCGCTGAACACCGTTGCTGGCACGG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646146.1
CDS-3UTR CAA 90 bp GCCAGCACAGGGCGCGGGAGGGCCCGCTCCTTCTCCCTGGTACATAGGCATTATCTTTTCTTGGAATTCTaGCCGCCGCTCCGGCCGGAC +
Preference number: 5 (lower is better)
Translates to: ASTGRGRARSFSLVHRHYLFLEF*PPLRPD
Trigger: GTCCGGCCGGAGCGGCGGCAAGAATTCCAAGAAAAG...ATAATGCCTATGTACCAGGGAGAAGGAGCGGGCCCTCCCGCGCCCTGTGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529432.5
ENST00000529750.5
CDS-3UTR CAA 90 bp GTGGGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCCTGAGAAACTCAGGATaGGGAATGGCTCCCGTAGGG +
Preference number: 5 (lower is better)
Translates to: VGGGRSGEVGAERRFLPSLRNSG*GMAPVG
Trigger: CCCTACGGGAGCCATTCCCAATCCTGAGTTTCTCAG...GGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS GCA 90 bp GCATGGCCAAGCTGCTTCAGGTACCACTGCAGCAGCTGGCTCTCCTaGTCCAGCAGAAGGCTCCAGAGGACCCCCGACTCCGTCAGTGAT +
Preference number: 5 (lower is better)
Translates to: AWPSCFRYHCSSWLS*SSRRLQRTPDSVSD
Trigger: ATCACTGACGGAGTCGGGGGTCCTCTGGAGCCTTCTGCTGGAGCAGGAGAGCCAGCTGCTGCAGTGGTACCTGAAGCAGCTTGGCCATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646146.1
CDS CCA 90 bp GTGGTCAGCGTGGTTCTCAGGACAAGCTGGCCAGCCAGTCTCCCATaGCGGGCTCTGCTTTCTTCTCGGCTGGTCCACGGGCAGAGAGTA +
Preference number: 5 (lower is better)
Translates to: VVSVVLRTSWPASLP*RALLSSRLVHGQRV
Trigger: TACTCTCTGCCCGTGGACCAGCCGAGAAGAAAGCAGAGCCCGCCATGGGAGACTGGCTGGCCAGCTTGTCCTGAGAACCACGCTGACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646146.1
CDS CCA 90 bp TCCTCAGATCCGTGCCAGCAACGGTGTTCAGCGGCAGCAGGTGCATaGCCAAGCTGCTTCAGGTACCACTGCAGCAGCTGGCTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: SSDPCQQRCSAAAGA*PSCFRYHCSSWLSC
Trigger: GCAGGAGAGCCAGCTGCTGCAGTGGTACCTGAAGCAGCTTGGCCATGCACCTGCTGCCGCTGAACACCGTTGCTGGCACGGATCTGAGGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646146.1
CDS-3UTR CAA 90 bp CTCCAGTCCTGGCTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGTGCAGGTGGAAACCGTaGGGGGTGTCCTCCGGGATA +
Preference number: 5 (lower is better)
Translates to: LQSWLQGLLRISSHKTPECRWKP*GVSSGI
Trigger: TATCCCGGAGGACACCCCCAACGGTTTCCACCTGCA...CTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAGCCAGGACTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCTCACAACTCTGGCTTTTCTaGGAATTCTTGCCGCCGCTC +
Preference number: 5 (lower is better)
Translates to: GGGRSGEVGAERRFLPSSQLWLF*EFLPPL
Trigger: GAGCGGCGGCAAGAATTCCAAGAAAAGCCAGAGTTG...TGAGGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529432.5
ENST00000529750.5
CDS-3UTR CAA 90 bp TCTGTGGGTAGACCCTGCACCCCGGACGTGGCAAGGGCCTTCTCTCCCTCTCTCCGCACCGTTGTAGTCTaGCTGGCCTTCTCTTTGGGA +
Preference number: 5 (lower is better)
Translates to: SVGRPCTPDVARAFSPSLRTVVV*LAFSLG
Trigger: TCCCAAAGAGAAGGCCAGCAAGACTACAACGGTGCG...GAGAGAGGGAGAGAAGGCCCTTGCCACGTCCGGGGTGCAGGGTCTACCCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp GTGGGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCGGGCATAGATTTCACTaGGCCTTTTCCTGCCCAAAC +
Preference number: 5 (lower is better)
Translates to: VGGGRSGEVGAERRFLPSGHRFH*AFSCPN
Trigger: GTTTGGGCAGGAAAAGGCCAAGTGAAATCTATGCCC...GGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS GCA 90 bp TGCTTTACAGCAGTGCTGCAAGAGACGGTCTCTGGCTGTAGATTCTaGACCATGCTGGGCTCAGGGGAGGGCTGGCCACATGGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: CFTAVLQETVSGCRF*TMLGSGEGWPHGSW
Trigger: CCAGCTGCCATGTGGCCAGCCCTCCCCTGAGCCCAGCATGGTGCAGAATCTACAGCCAGAGACCGTCTCTTGCAGCACTGCTGTAAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS CCA 90 bp ACCACACAGCTGATAACCAGCAGCAGCTTGGACACGCTCTGCAGGTaGAAACCGTTGGGGGTGTCCTCCGGGATATGCCGCGTCTGTGTG +
Preference number: 5 (lower is better)
Translates to: TTQLITSSSLDTLCR*KPLGVSSGICRVCV
Trigger: CACACAGACGCGGCATATCCCGGAGGACACCCCCAACGGTTTCCACCTGCAGAGCGTGTCCAAGCTGCTGCTGGTTATCAGCTGTGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322282.11
CDS-3UTR CAA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGCCTGGTTCTGCGGGGTaGGCGAGCGAGACCGCTTCC +
Preference number: 5 (lower is better)
Translates to: GLCTCIAQASCSHPVPALPGSAG*ASETAS
Trigger: GGAAGCGGTCTCGCTCGCCAACCCCGCAGAACCAGG...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR CAA 90 bp GTGGGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCCCCTATGTGCACACATaGTCTAGTGGGTTCAAATCG +
Preference number: 5 (lower is better)
Translates to: VGGGRSGEVGAERRFLPSPYVHT*SSGFKS
Trigger: CGATTTGAACCCACTAGACAATGTGTGCACATAGGG...GGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp ATGAGGTGTAGGGAGGCCAGAGCCCTGCCATATGTATTGCACAGGCCTCTTGCAACAGAGCCAGCTGCCTaGCCTGGAGCAGAGGCCACC +
Preference number: 5 (lower is better)
Translates to: MRCREARALPYVLHRPLATEPAA*PGAEAT
Trigger: GGTGGCCTCTGCTCCAGGCAAGGCAGCTGGCTCTGT...TGCAAGAGGCCTGTGCAATACATATGGCAGGGCTCTGGCCTCCCTACACCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS TCA 90 bp TCTGGGAAGTTGGTTGGGTGGGTTGAGGATCCTCAGGGATGCCCATaGGCCTCAGGAGGTACTTGTGGGACCCAGCCCCAGTCAAACCCT +
Preference number: 5 (lower is better)
Translates to: SGKLVGWVEDPQGCP*ASGGTCGTQPQSNP
Trigger: AGGGTTTGACTGGGGCTGGGTCCCACAAGTACCTCCTGAGGCTCATGGGCATCCCTGAGGATCCTCAACCCACCCAACCAACTTCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525945.1
CDS CCA 90 bp AGAACACAGCTGATAACCAGCAGCAGCTTGGACACGCTCTGCAGGTaGAAACCGTTGGGGGTGTCCTCCGGGATATGCCGCGTCTGTGTG +
Preference number: 5 (lower is better)
Translates to: RTQLITSSSLDTLCR*KPLGVSSGICRVCV
Trigger: CACACAGACGCGGCATATCCCGGAGGACACCCCCAACGGTTTCCACCTGCAGAGCGTGTCCAAGCTGCTGCTGGTTATCAGCTGTGTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000525945.1
ENST00000532581.5
ENST00000635736.2
ENST00000638157.1
CDS CCA 90 bp ATCACACAGCTGATAACCAGCAGCAGCTTGGACACGCTCTGCAGGTaGAAACCGTTGGGGGTGTCCTCCGGGATATGCCGCGTCTGTGTG +
Preference number: 5 (lower is better)
Translates to: ITQLITSSSLDTLCR*KPLGVSSGICRVCV
Trigger: CACACAGACGCGGCATATCCCGGAGGACACCCCCAACGGTTTCCACCTGCAGAGCGTGTCCAAGCTGCTGCTGGTTATCAGCTGTGTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGGCCGGCGTGCTGCGGTaGGAGTTACTGGCAGTGCAG +
Preference number: 5 (lower is better)
Translates to: GLCTCIAQASCSHPVPALAGVLR*ELLAVQ
Trigger: CTGCACTGCCAGTAACTCCAACCGCAGCACGCCGGC...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456860.6
ENST00000529750.5
CDS-3UTR CAA 90 bp TGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTCCTGGTTCTGCGGGGTaGGCGAGCGAGACCGCTTCC +
Preference number: 5 (lower is better)
Translates to: WSMYMYCTGLLQPPCSCLPGSAG*ASETAS
Trigger: GGAAGCGGTCTCGCTCGCCAACCCCGCAGAACCAGG...AAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR CAA 90 bp GCCAGCACAGGGCGCGGGAGGGCCCGCTCCTTCTCCCTGGTACATAGGCATTATTTCTCCCCCATGATGTaGTCAATGGCGAGCTCCTTT +
Preference number: 5 (lower is better)
Translates to: ASTGRGRARSFSLVHRHYFSPMM*SMASSF
Trigger: AAAGGAGCTCGCCATTGACAACATCATGGGGGAGAA...ATAATGCCTATGTACCAGGGAGAAGGAGCGGGCCCTCCCGCGCCCTGTGCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp TTTGGGAAGATGGTCTGGTCCATGCAGAGAGTGGTCTGGCCCTTGAGTGCAGGGTGCAGGTGGAAACCGTaGGGGGTGTCCTCCGGGATA +
Preference number: 5 (lower is better)
Translates to: FGKMVWSMQRVVWPLSAGCRWKP*GVSSGI
Trigger: TATCCCGGAGGACACCCCCAACGGTTTCCACCTGCA...CCCTGCACTCAAGGGCCAGACCACTCTCTGCATGGACCAGACCATCTTCCCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp CTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGCTGTTGCACAGAATAACCAGCAGCAGCTaGGACACGCTCTGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: LQGLLRISSHKTPELLHRITSSS*DTLCRW
Trigger: CCACCTGCAGAGCGTGTCCAAGCTGCTGCTGGTTAT...TCTGTGCAACAGCTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GCCAGCACAGGGCGCGGGAGGGCCCGCTCCTTCTCCCTGGTACATAGGCATTATCACAAAGCATTCCTCTaGAGCTCTCTTTGTCCTCCC +
Preference number: 5 (lower is better)
Translates to: ASTGRGRARSFSLVHRHYHKAFL*SSLCPP
Trigger: GGGAGGACAAAGAGAGCTCAAGAGGAATGCTTTGTG...ATAATGCCTATGTACCAGGGAGAAGGAGCGGGCCCTCCCGCGCCCTGTGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp CACTCGACCCGTGTTCTTTCCCATAGATGGCCCAGTGCAGGTGTTGGGGCTGCTTGGCTCCAGGGCCTGTaGAGGATCTCCAGTCACAAG +
Preference number: 5 (lower is better)
Translates to: HSTRVLSHRWPSAGVGAAWLQGL*RISSHK
Trigger: CTTGTGACTGGAGATCCTCAACAGGCCCTGGAGCCA...AGCAGCCCCAACACCTGCACTGGGCCATCTATGGGAAAGAACACGGGTCGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp CTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACAGAGCAAACTTGGATGGCATaGGGAATGAGGCGAGCTGTT +
Preference number: 5 (lower is better)
Translates to: LCNLSTWHPSPRPMPQTEQTWMA*GMRRAV
Trigger: AACAGCTCGCCTCATTCCCAATGCCATCCAAGTTTG...CTCTGTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp CACTCGACCCGTGTTCTTTCCCATAGATGGCCCAGTGCAGGTGTTGGGGCTGCTGGACTGGCATCTGGCTaGGTCTCTATGCTGCTCTTG +
Preference number: 5 (lower is better)
Translates to: HSTRVLSHRWPSAGVGAAGLASG*VSMLLL
Trigger: CAAGAGCAGCATAGAGACCAAGCCAGATGCCAGTCC...AGCAGCCCCAACACCTGCACTGGGCCATCTATGGGAAAGAACACGGGTCGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGACCCTGAGTCGGCTCTaGTTCCGAGCCACACGGGTG +
Preference number: 5 (lower is better)
Translates to: GLCTCIAQASCSHPVPALTLSRL*FRATRV
Trigger: CACCCGTGTGGCTCGGAACAAGAGCCGACTCAGGGT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp AACTCCCTGCGGCCAGGTCTGCTCTGTCACTTGACTCCCAACAAAGAACCCTTTACCCTGAGTCGGCTCTaGTTCCGAGCCACACGGGTG +
Preference number: 5 (lower is better)
Translates to: NSLRPGLLCHLTPNKEPFTLSRL*FRATRV
Trigger: CACCCGTGTGGCTCGGAACAAGAGCCGACTCAGGGT...AAAGGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGACCTGGCCGCAGGGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp GGAGGAGGGAGATCAGGGGAGGTCGGTGCTGAGAGGCGGTTCCTGCCCTCCTCATTCGCAGGCATAACTTaGGCTCAACATTTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: GGGRSGEVGAERRFLPSSFAGIT*AQHFPS
Trigger: AGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAA...TGAGGAGGGCAGGAACCGCCTCTCAGCACCGACCTCCCCTGATCTCCCTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp AACTCCCTGCGGCCAGGTCTGCTCTGTCACTTGACTCCCAACAAAGAACCCTTTCCTCACCCTCCTCCCTaGGAGGATCACCTGGGCATG +
Preference number: 5 (lower is better)
Translates to: NSLRPGLLCHLTPNKEPFPHPPP*EDHLGM
Trigger: CATGCCCAGGTGATCCTCCAAGGGAGGAGGGTGAGG...AAAGGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGACCTGGCCGCAGGGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS TCA 90 bp AGACGGGGGCCTCACTGCTCCCTGTGGATGTTAGTGTGCTGTTGGTaGTGGATTTCTTGGGCAGCTGTGGACTGGCATCTGGCTTGGTCT +
Preference number: 5 (lower is better)
Translates to: RRGPHCSLWMLVCCW*WISWAAVDWHLAWS
Trigger: AGACCAAGCCAGATGCCAGTCCACAGCTGCCCAAGAAATCCATCACCAACAGCACACTAACATCCACAGGGAGCAGTGAGGCCCCCGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000322282.11
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000534764.1
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS GCA 90 bp AGAGAAAGAGAGAAAGGGAGAAAGAGCCAGAAGAACTGCTGCCACTaGCCCTTCTTCCCCCTCTCCCAGCTGAAAGCTGGGCTTGGAGGC +
Preference number: 5 (lower is better)
Translates to: REREKGRKSQKNCCH*PFFPLSQLKAGLGG
Trigger: GCCTCCAAGCCCAGCTTTCAGCTGGGAGAGGGGGAAGAAGGGGCAGTGGCAGCAGTTCTTCTGGCTCTTTCTCCCTTTCTCTCTTTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322282.11
ENST00000456860.6
ENST00000529750.5
CDS-3UTR CAA 90 bp ATGGCCAGACAACTCGACTGCACTCGACCCGTGTTCTTTCCCATAGATGGCCCACTCTCCTGGCTCGCCTaGTACATGGTCTGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: MARQLDCTRPVFFPIDGPLSWLA*YMVCVS
Trigger: GGAGACACAGACCATGTACAAGGCGAGCCAGGAGAG...TGGGCCATCTATGGGAAAGAACACGGGTCGAGTGCAGTCGAGTTGTCTGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp TGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTACCCTGAGTCGGCTCTaGTTCCGAGCCACACGGGTG +
Preference number: 5 (lower is better)
Translates to: WSMYMYCTGLLQPPCSCLTLSRL*FRATRV
Trigger: CACCCGTGTGGCTCGGAACAAGAGCCGACTCAGGGT...AAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp ATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTACCCTGAGTCGGCTCTaGTTCCGAGCCACACGGGTG +
Preference number: 5 (lower is better)
Translates to: MVYVHVLHRPLAATLFLPTLSRL*FRATRV
Trigger: CACCCGTGTGGCTCGGAACAAGAGCCGACTCAGGGT...AGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTGCAGGTGGAAACCGTaGGGGGTGTCCTCCGGGATA +
Preference number: 5 (lower is better)
Translates to: GLCTCIAQASCSHPVPALCRWKP*GVSSGI
Trigger: TATCCCGGAGGACACCCCCAACGGTTTCCACCTGCA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GCAAATGAGGCTGGCAACCCATCTTGGTGCTCACCACTCACAGTGTTCTGTGGGATAACCAGCAGCAGCTaGGACACGCTCTGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: ANEAGNPSWCSPLTVFCGITSSS*DTLCRW
Trigger: CCACCTGCAGAGCGTGTCCAAGCTGCTGCTGGTTAT...CCCACAGAACACTGTGAGTGGTGAGCACCAAGATGGGTTGCCAGCCTCATTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp GCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATATAACCAGCAGCAGCTaGGACACGCTCTGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: ASCLAWSRGHPFASAMSYITSSS*DTLCRW
Trigger: CCACCTGCAGAGCGTGTCCAAGCTGCTGCTGGTTAT...ATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp TTGACTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACCACCCTGTTCCTGCCTaGTCAATGATAGCGATTCCT +
Preference number: 5 (lower is better)
Translates to: LTMQSQHVAPKPQADAPDHPVPA*SMIAIP
Trigger: AGGAATCGCTATCATTGACAAGGCAGGAACAGGGTG...GTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GTGCTCACCACTCACAGTGTTCTGTGGGTAGACCCTGCACCCCGGACGTGGCAAGTCTATGTACATGTATaGCACAGGCCTCTTGCAGCC +
Preference number: 5 (lower is better)
Translates to: VLTTHSVLWVDPAPRTWQVYVHV*HRPLAA
Trigger: GGCTGCAAGAGGCCTGTGCAATACATGTACATAGAC...TTGCCACGTCCGGGGTGCAGGGTCTACCCACAGAACACTGTGAGTGGTGAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp CTCCAGTCCTGGCTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGTTAAGCCTTCAGATGTaGGGGAGATCGTCAGCATCA +
Preference number: 5 (lower is better)
Translates to: LQSWLQGLLRISSHKTPELSLQM*GRSSAS
Trigger: TGATGCTGACGATCTCCCCAACATCTGAAGGCTTAA...CTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAGCCAGGACTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACCTTGCGCACACAGAGCCAGCTGCCTaGCCTGGAGCAGAGGCCACC +
Preference number: 5 (lower is better)
Translates to: GQPCVFLGTSSKFSDLAHTEPAA*PGAEAT
Trigger: GGTGGCCTCTGCTCCAGGCAAGGCAGCTGGCTCTGT...GTGCGCAAGGTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp CTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGCTGTTGCACAGAGTAAGTTTTCTGACCTaGCGCACAGCGCCAGGCAAA +
Preference number: 5 (lower is better)
Translates to: LQGLLRISSHKTPELLHRVSFLT*RTAPGK
Trigger: TTTGCCTGGCGCTGTGCGCAAGGTCAGAAAACTTAC...TCTGTGCAACAGCTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp TTTCTGCTCTGCACTATGACAGCAAGCAGGGGCCTTAAAAGATGGCCTTCCAGGGCCGGCGTGCTGCGGTaGGAGTTACTGGCAGTGCTT +
Preference number: 5 (lower is better)
Translates to: FLLCTMTASRGLKRWPSRAGVLR*ELLAVL
Trigger: AAGCACTGCCAGTAACTCCAACCGCAGCACGCCGGC...CCTGGAAGGCCATCTTTTAAGGCCCCTGCTTGCTGTCATAGTGCAGAGCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS-3UTR CAA 90 bp TATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTGGAGCTGCGTGGACTaGCTGCCCTTGCAGCTACCC +
Preference number: 5 (lower is better)
Translates to: YGLCTCIAQASCSHPVPAWSCVD*LPLQLP
Trigger: GGGTAGCTGCAAGGGCAGCAAGTCCACGCAGCTCCA...GGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS-3UTR CAA 90 bp AGCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTAGCCCTGCCATATGTATaGCACAGGCCTCTTGCAGCC +
Preference number: 5 (lower is better)
Translates to: SQLPCLEQRPPFCFCNVLALPYV*HRPLAA
Trigger: GGCTGCAAGAGGCCTGTGCAATACATATGGCAGGGC...TAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS TCA 90 bp GGCCCCAGGGACATCCTCCAAGAGCACTTAGGTCTCTGGCTAATATaGGCACAGTCAACAAGGGTATGGAGAGGACACGGAGCAGGACAG +
Preference number: 5 (lower is better)
Translates to: GPRDILQEHLGLWLI*AQSTRVWRGHGAGQ
Trigger: CTGTCCTGCTCCGTGTCCTCTCCATACCCTTGTTGACTGTGCTCATATTAGCCAGAGACCTAAGTGCTCTTGGAGGATGTCCCTGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS TCA 90 bp ACTCTGACAGGTGTCCTTTCTGCTCCTAGAGCTGCATGCCCAGCATaGAGCTTCACAAGTGAGCCGAGGTGGTCAGCGTGGTTCTCAGGA +
Preference number: 5 (lower is better)
Translates to: TLTGVLSAPRAACPA*SFTSEPRWSAWFSG
Trigger: TCCTGAGAACCACGCTGACCACCTCGGCTCACTTGTGAAGCTTCATGCTGGGCATGCAGCTCTAGGAGCAGAAAGGACACCTGTCAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646146.1
CDS GCA 90 bp TATTTGGTGTGGTCGTGCCGCCTTACAGAAGTCCCTCTCTCTCTCTaGCTGGCTCCCTTTCTCTCTCTCCCTCTGACTCCCTCACAGACA +
Preference number: 5 (lower is better)
Translates to: YLVWSCRLTEVPLSL*LAPFLSLPLTPSQT
Trigger: TGTCTGTGAGGGAGTCAGAGGGAGAGAGAGAAAGGGAGCCAGGCAGAGAGAGAGAGGGACTTCTGTAAGGCGGCACGACCACACCAAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529432.5
ENST00000532581.5
CDS GCA 90 bp TCAGGGAGGAGACGTGGTAGTGACAAGCCTGCTTTACAGCAGTGCTaGAAGAGACGGTCTCTGGCTGTAGATTCTGCACCATGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: SGRRRGSDKPALQQC*KRRSLAVDSAPCWA
Trigger: AGCCCAGCATGGTGCAGAATCTACAGCCAGAGACCGTCTCTTGCAGCACTGCTGTAAAGCAGGCTTGTCACTACCACGTCTCCTCCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS GCA 90 bp TCCTCAGGGAGGAGACGTGGTAGTGACAAGCCTGCTTTACAGCAGTaGTGCAAGAGACGGTCTCTGGCTGTAGATTCTGCACCATGCTGG +
Preference number: 5 (lower is better)
Translates to: SSGRRRGSDKPALQQ*CKRRSLAVDSAPCW
Trigger: CCAGCATGGTGCAGAATCTACAGCCAGAGACCGTCTCTTGCAGCACTGCTGTAAAGCAGGCTTGTCACTACCACGTCTCCTCCCTGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS-3UTR CAA 90 bp GACTCTTTCATGAATCTCCACAAGCTCTGCCTGGAGCTGGTGGGACTCTTTTGGCTTTTCTTGGAATTCTaGCCGCCGCTCCGGCCGGAC +
Preference number: 5 (lower is better)
Translates to: DSFMNLHKLCLELVGLFWLFLEF*PPLRPD
Trigger: GTCCGGCCGGAGCGGCGGCAAGAATTCCAAGAAAAG...CCAAAAGAGTCCCACCAGCTCCAGGCAGAGCTTGTGGAGATTCATGAAAGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529432.5
ENST00000529750.5
CDS-3UTR CAA 90 bp ATGAGGTGTAGGGAGGCCAGAGCCCTGCCATATGTATTGCACAGGCCTCTTGCACAGTATCCCATTGTGTaGAAGTCGTCGTCAGGGGGC +
Preference number: 5 (lower is better)
Translates to: MRCREARALPYVLHRPLAQYPIV*KSSSGG
Trigger: GCCCCCTGACGACGACTTCAACACAATGGGATACTG...TGCAAGAGGCCTGTGCAATACATATGGCAGGGCTCTGGCCTCCCTACACCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS-3UTR CAA 90 bp GTCCTGGCTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGCTGTTGTCTCTATGCTGCTCTaGGATGAGCTGTCATTCACT +
Preference number: 5 (lower is better)
Translates to: VLAPGPVEDLQSQDPGAVVSMLL*DELSFT
Trigger: AGTGAATGACAGCTCATCCAAGAGCAGCATAGAGAC...AACAGCTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAGCCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGCTCTCCTGGCTCGCCTaGTACATGGTCTGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: GLCTCIAQASCSHPVPALLSWLA*YMVCVS
Trigger: GGAGACACAGACCATGTACAAGGCGAGCCAGGAGAG...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp TGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTTGCAGGTGGAAACCGTaGGGGGTGTCCTCCGGGATA +
Preference number: 5 (lower is better)
Translates to: WSMYMYCTGLLQPPCSCLCRWKP*GVSSGI
Trigger: TATCCCGGAGGACACCCCCAACGGTTTCCACCTGCA...AAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGATAACCAGCAGCAGCTaGGACACGCTCTGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: GLCTCIAQASCSHPVPALITSSS*DTLCRW
Trigger: CCACCTGCAGAGCGTGTCCAAGCTGCTGCTGGTTAT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTATTGCACAGGCCTCTaGCAGCCACCCTGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: GLCTCIAQASCSHPVPALYCTGL*QPPCSC
Trigger: GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGAAACAAGCCCTGGAGTaGCCGTCAACAGCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: GLCTCIAQASCSHPVPALKQALE*PSTARL
Trigger: CAGCCTGGCTGTTGACGGCAACTCCAGGGCTTGTTT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456860.6
CDS-3UTR CAA 90 bp AGTTTTGGCTTCTGGCTGTGCCAAGGGGGAGATTTCCAGCAGTCTGCACCATGCCTGAGAAACTCAGGATaGGGAATGGCTCCCGTAGGG +
Preference number: 5 (lower is better)
Translates to: SFGFWLCQGGDFQQSAPCLRNSG*GMAPVG
Trigger: CCCTACGGGAGCCATTCCCAATCCTGAGTTTCTCAG...GCATGGTGCAGACTGCTGGAAATCTCCCCCTTGGCACAGCCAGAAGCCAAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp GGAGGAGAGTATCCTTCAGAACACGAGTCTCGGGAGCCTGCCACCACACAATGCCGCACCATGATTAGCTaGTCTGAGGCCAGTCTTGTC +
Preference number: 5 (lower is better)
Translates to: GGEYPSEHESREPATTQCRTMIS*SEASLV
Trigger: GACAAGACTGGCCTCAGACAAGCTAATCATGGTGCG...GCATTGTGTGGTGGCAGGCTCCCGAGACTCGTGTTCTGAAGGATACTCTCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp TATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCGAGAGGGGGAGTGACTaGCCCAAGGCCACAGAGCTT +
Preference number: 5 (lower is better)
Translates to: YGLCTCIAQASCSHPVPAERGSD*PKATEL
Trigger: AAGCTCTGTGGCCTTGGGCAAGTCACTCCCCCTCTC...GGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp TTGACTATGCAATCTCAGCACGTGGCACCCAAGCCCCAGGCCGATGCCCCAGACGCAGAGGCCACCCTTTaGCTTCTGCAATGTCTTATT +
Preference number: 5 (lower is better)
Translates to: LTMQSQHVAPKPQADAPDAEATL*LLQCLI
Trigger: AATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGC...GTCTGGGGCATCGGCCTGGGGCTTGGGTGCCACGTGCTGAGATTGCATAGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GCTCAGATGCTTTTTCTATGTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTACAGAGCCAGCTGCCTaGCCTGGAGCAGAGGCCACC +
Preference number: 5 (lower is better)
Translates to: AQMLFLCANCLRQSSPLATEPAA*PGAEAT
Trigger: GGTGGCCTCTGCTCCAGGCAAGGCAGCTGGCTCTGT...AGCCAGTGGAGACGACTGTCTGAGACAGTTTGCACATAGAAAAAGCATCTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGCCATCCCTCCCCACCTaGGAGTCTAGGTTGAGTTGG +
Preference number: 5 (lower is better)
Translates to: GLCTCIAQASCSHPVPALPSLPT*ESRLSW
Trigger: CCAACTCAACCTAGACTCCAAGGTGGGGAGGGATGG...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp ATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCGCCGGCGTGCTGCGGTaGGAGTTACTGGCAGTGTTG +
Preference number: 5 (lower is better)
Translates to: IWSMYMYCTGLLQPPCSCAGVLR*ELLAVL
Trigger: CAACACTGCCAGTAACTCCAACCGCAGCACGCCGGC...GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS-3UTR CAA 90 bp AGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAAGAACCTGGTTCTGCGGGGTaGGCGAGCGAGACCGCTTCC +
Preference number: 5 (lower is better)
Translates to: RVFAGITLAQHFPSKSQEPGSAG*ASETAS
Trigger: GGAAGCGGTCTCGCTCGCCAACCCCGCAGAACCAGG...TTCTTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529432.5
ENST00000529750.5
CDS-3UTR CAA 90 bp CTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAACCTGGTTCTGCGGGGTaGGCGAGCGAGACCGCTTCC +
Preference number: 5 (lower is better)
Translates to: LRVFAGITLAQHFPSKSQPGSAG*ASETAS
Trigger: GGAAGCGGTCTCGCTCGCCAACCCCGCAGAACCAGG...TTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529432.5
ENST00000529750.5
CDS-3UTR CAA 90 bp ATGAGGTGTAGGGAGGCCAGAGCCCTGCCATATGTATTGCACAGGCCTCTTGCACAACTCTGGCTTTTCTaGGAATTCTTGCCGCCGCTC +
Preference number: 5 (lower is better)
Translates to: MRCREARALPYVLHRPLAQLWLF*EFLPPL
Trigger: GAGCGGCGGCAAGAATTCCAAGAAAAGCCAGAGTTG...TGCAAGAGGCCTGTGCAATACATATGGCAGGGCTCTGGCCTCCCTACACCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS-3UTR CAA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGCAGTATCCCATTGTGTaGAAGTCGTCGTCAGGGGGC +
Preference number: 5 (lower is better)
Translates to: GLCTCIAQASCSHPVPALQYPIV*KSSSGG
Trigger: GCCCCCTGACGACGACTTCAACACAATGGGATACTG...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GACTTGCCCAAGGCCACAGAGCTTAGTCAATGGAAAAGTCAGGACCCAGGCTCACAGTATCCCATTGTGTaGAAGTCGTCGTCAGGGGGC +
Preference number: 5 (lower is better)
Translates to: DLPKATELSQWKSQDPGSQYPIV*KSSSGG
Trigger: GCCCCCTGACGACGACTTCAACACAATGGGATACTG...TGAGCCTGGGTCCTGACTTTTCCATTGACTAAGCTCTGTGGCCTTGGGCAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGGGACTGGCATCTGGCTaGGTCTCTATGCTGCTCTTG +
Preference number: 5 (lower is better)
Translates to: GLCTCIAQASCSHPVPALGLASG*VSMLLL
Trigger: CAAGAGCAGCATAGAGACCAAGCCAGATGCCAGTCC...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GCAAATGAGGCTGGCAACCCATCTTGGTGCTCACCACTCACAGTGTTCTGTGGGTTGGTGATGGATTTCTaGGGCAGCTGTGGACTGGCA +
Preference number: 5 (lower is better)
Translates to: ANEAGNPSWCSPLTVFCGLVMDF*GSCGLA
Trigger: TGCCAGTCCACAGCTGCCCAAGAAATCCATCACCAA...CCCACAGAACACTGTGAGTGGTGAGCACCAAGATGGGTTGCCAGCCTCATTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp ATCCCTACCAGTGTCCCTCACCCAAAGGCCTGGACAAGAACTGAACAAGGACCCTTGGTGATGGATTTCTaGGGCAGCTGTGGACTGGCA +
Preference number: 5 (lower is better)
Translates to: IPTSVPHPKAWTRTEQGPLVMDF*GSCGLA
Trigger: TGCCAGTCCACAGCTGCCCAAGAAATCCATCACCAA...GGGTCCTTGTTCAGTTCTTGTCCAGGCCTTTGGGTGAGGGACACTGGTAGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp CTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGCTGTTGCACAGAGTGGGGATGTCCTCATaGTCATTGAAGTCCAGTGAA +
Preference number: 5 (lower is better)
Translates to: LQGLLRISSHKTPELLHRVGMSS*SLKSSE
Trigger: TTCACTGGACTTCAATGACAATGAGGACATCCCCAC...TCTGTGCAACAGCTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp ATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTCTCTCCTGGCTCGCCTaGTACATGGTCTGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: MVYVHVLHRPLAATLFLPLSWLA*YMVCVS
Trigger: GGAGACACAGACCATGTACAAGGCGAGCCAGGAGAG...AGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp AGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATTGTCTCTCCTGGCTCGCCTaGTACATGGTCTGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: SCLAWSRGHPFASAMSYCLSWLA*YMVCVS
Trigger: GGAGACACAGACCATGTACAAGGCGAGCCAGGAGAG...ACAATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGCGCACCGTTGTAGTCTaGCTGGCCTTCTCTTTGGGA +
Preference number: 5 (lower is better)
Translates to: GLCTCIAQASCSHPVPALRTVVV*LAFSLG
Trigger: TCCCAAAGAGAAGGCCAGCAAGACTACAACGGTGCG...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGGAACCTGCCACATGTTaGATCCTGTGGCCCACATCC +
Preference number: 5 (lower is better)
Translates to: GLCTCIAQASCSHPVPALEPATC*ILWPTS
Trigger: GGATGTGGGCCACAGGATCAAACATGTGGCAGGTTC...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp AACTCCCTGCGGCCAGGTCTGCTCTGTCACTTGACTCCCAACAAAGAACCCTTTGAACCTGCCACATGTTaGATCCTGTGGCCCACATCC +
Preference number: 5 (lower is better)
Translates to: NSLRPGLLCHLTPNKEPFEPATC*ILWPTS
Trigger: GGATGTGGGCCACAGGATCAAACATGTGGCAGGTTC...AAAGGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGACCTGGCCGCAGGGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp TATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCATAACCAGCAGCAGCTaGGACACGCTCTGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: YGLCTCIAQASCSHPVPAITSSS*DTLCRW
Trigger: CCACCTGCAGAGCGTGTCCAAGCTGCTGCTGGTTAT...GGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp TGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTTATTGCACAGGCCTCTaGCAGCCACCCTGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: WSMYMYCTGLLQPPCSCLYCTGL*QPPCSC
Trigger: GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATA...AAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp CACTCGACCCGTGTTCTTTCCCATAGATGGCCCAGTGCAGGTGTTGGGGCTGCTGGGAGCCACAAGCTATaGTTGGCAAAAATGGCTGTT +
Preference number: 5 (lower is better)
Translates to: HSTRVLSHRWPSAGVGAAGSHKL*LAKMAV
Trigger: AACAGCCATTTTTGCCAACAATAGCTTGTGGCTCCC...AGCAGCCCCAACACCTGCACTGGGCCATCTATGGGAAAGAACACGGGTCGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACCTTGCGCACCTGCTGACTGCTCTGTaGGCTGCTGGATCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: GQPCVFLGTSSKFSDLAHLLTAL*AAGSAG
Trigger: CCCAGCAGATCCAGCAGCCAACAGAGCAGTCAGCAG...GTGCGCAAGGTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS GCA 90 bp ACAGAAAGAGAAAGAGAGAAAGGGAGAAAGAGCCAGAAGAACTGCTaGCACTGCCCCTTCTTCCCCCTCTCCCAGCTGAAAGCTGGGCTT +
Preference number: 5 (lower is better)
Translates to: TEREREKGRKSQKNC*HCPFFPLSQLKAGL
Trigger: AAGCCCAGCTTTCAGCTGGGAGAGGGGGAAGAAGGGGCAGTGGCAGCAGTTCTTCTGGCTCTTTCTCCCTTTCTCTCTTTCTCTTTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322282.11
ENST00000456860.6
ENST00000529750.5
CDS GCA 90 bp AACACAGAAAGAGAAAGAGAGAAAGGGAGAAAGAGCCAGAAGAACTaGTGCCACTGCCCCTTCTTCCCCCTCTCCCAGCTGAAAGCTGGG +
Preference number: 5 (lower is better)
Translates to: NTEREREKGRKSQKN*CHCPFFPLSQLKAG
Trigger: CCCAGCTTTCAGCTGGGAGAGGGGGAAGAAGGGGCAGTGGCAGCAGTTCTTCTGGCTCTTTCTCCCTTTCTCTCTTTCTCTTTCTGTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322282.11
ENST00000456860.6
ENST00000529750.5
CDS GCA 90 bp AGATGTTGCCAGAAGAGATCAGCATGTGAGTCTGAGTGGACTAGGTaGGGAAGATCCGCCCTCATTGTGAGTGGGCACCATCCATTCTGC +
Preference number: 5 (lower is better)
Translates to: RCCQKRSACESEWTR*GRSALIVSGHHPFC
Trigger: GCAGAATGGATGGTGCCCACTCACAATGAGGGCGGATCTTCCGCACCTAGTCCACTCAGACTCACATGCTGATCTCTTCTGGCAACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525757.1
CDS CCA 90 bp CAGAATGAGAGGCACACAGAGCAAGGTGTGGGAGGGCTCCAAAAATaGAGCTTCCTTCAGTCTCAGGGATGCAAAGCCCTTCTGGCACAT +
Preference number: 5 (lower is better)
Translates to: QNERHTEQGVGGLQK*SFLQSQGCKALLAH
Trigger: ATGTGCCAGAAGGGCTTTGCATCCCTGAGACTGAAGGAAGCTCCATTTTTGGAGCCCTCCCACACCTTGCTCTGTGTGCCTCTCATTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS-3UTR CAA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGAAGTGCCAGAGCTCCTaGGGACACAGAGGCTTTTCA +
Preference number: 5 (lower is better)
Translates to: GLCTCIAQASCSHPVPALKCQSS*GHRGFS
Trigger: TGAAAAGCCTCTGTGTCCCAAGGAGCTCTGGCACTT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GGGAATAGTTTTGGCTTCTGGCTGTGCCAAGGGGGAGATTTCCAGCAGTCTGCAAAGTGCCAGAGCTCCTaGGGACACAGAGGCTTTTCA +
Preference number: 5 (lower is better)
Translates to: GNSFGFWLCQGGDFQQSAKCQSS*GHRGFS
Trigger: TGAAAAGCCTCTGTGTCCCAAGGAGCTCTGGCACTT...TGCAGACTGCTGGAAATCTCCCCCTTGGCACAGCCAGAAGCCAAAACTATTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp GACTTGCCCAAGGCCACAGAGCTTAGTCAATGGAAAAGTCAGGACCCAGGCTCAAAGTGCCAGAGCTCCTaGGGACACAGAGGCTTTTCA +
Preference number: 5 (lower is better)
Translates to: DLPKATELSQWKSQDPGSKCQSS*GHRGFS
Trigger: TGAAAAGCCTCTGTGTCCCAAGGAGCTCTGGCACTT...TGAGCCTGGGTCCTGACTTTTCCATTGACTAAGCTCTGTGGCCTTGGGCAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp TATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCCAGTATCCCATTGTGTaGAAGTCGTCGTCAGGGGGC +
Preference number: 5 (lower is better)
Translates to: YGLCTCIAQASCSHPVPAQYPIV*KSSSGG
Trigger: GCCCCCTGACGACGACTTCAACACAATGGGATACTG...GGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp ATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTGGACTGGCATCTGGCTaGGTCTCTATGCTGCTCTTG +
Preference number: 5 (lower is better)
Translates to: MVYVHVLHRPLAATLFLPGLASG*VSMLLL
Trigger: CAAGAGCAGCATAGAGACCAAGCCAGATGCCAGTCC...AGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTTGGTGATGGATTTCTaGGGCAGCTGTGGACTGGCA +
Preference number: 5 (lower is better)
Translates to: GLCTCIAQASCSHPVPALLVMDF*GSCGLA
Trigger: TGCCAGTCCACAGCTGCCCAAGAAATCCATCACCAA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp ATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTGAACCTGCCACATGTTaGATCCTGTGGCCCACATCC +
Preference number: 5 (lower is better)
Translates to: MVYVHVLHRPLAATLFLPEPATC*ILWPTS
Trigger: GGATGTGGGCCACAGGATCAAACATGTGGCAGGTTC...AGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp TTTCTGCTCTGCACTATGACAGCAAGCAGGGGCCTTAAAAGATGGCCTTCCAGGGAACCTGCCACATGTTaGATCCTGTGGCCCACATCC +
Preference number: 5 (lower is better)
Translates to: FLLCTMTASRGLKRWPSREPATC*ILWPTS
Trigger: GGATGTGGGCCACAGGATCAAACATGTGGCAGGTTC...CCTGGAAGGCCATCTTTTAAGGCCCCTGCTTGCTGTCATAGTGCAGAGCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp ACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCCTGCAGGTGGAAACCGTaGGGGGTGTCCTCCGGGATA +
Preference number: 5 (lower is better)
Translates to: TTMFFKPSDVGEIVSISSCRWKP*GVSSGI
Trigger: TATCCCGGAGGACACCCCCAACGGTTTCCACCTGCA...GGAGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GAACCCCCATTGCCAAGTCTGAGAAACTCAGGATTGGGAATGGCTCCCGTAGGGCACCCTGTTCCTGCCTaGTCAATGATAGCGATTCCT +
Preference number: 5 (lower is better)
Translates to: EPPLPSLRNSGLGMAPVGHPVPA*SMIAIP
Trigger: AGGAATCGCTATCATTGACAAGGCAGGAACAGGGTG...CCCTACGGGAGCCATTCCCAATCCTGAGTTTCTCAGACTTGGCAATGGGGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp ATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCTATTGCACAGGCCTCTaGCAGCCACCCTGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: IWSMYMYCTGLLQPPCSCYCTGL*QPPCSC
Trigger: GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATA...GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp AGTTTTGGCTTCTGGCTGTGCCAAGGGGGAGATTTCCAGCAGTCTGCACCATGCTTAGACTGGGCTCCCTaGATGCTTCTGTGTTCCCAA +
Preference number: 5 (lower is better)
Translates to: SFGFWLCQGGDFQQSAPCLDWAP*MLLCSQ
Trigger: TTGGGAACACAGAAGCATCAAGGGAGCCCAGTCTAA...GCATGGTGCAGACTGCTGGAAATCTCCCCCTTGGCACAGCCAGAAGCCAAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp ATCCCTACCAGTGTCCCTCACCCAAAGGCCTGGACAAGAACTGAACAAGGACCCGGGCATAGATTTCACTaGGCCTTTTCCTGCCCAAAC +
Preference number: 5 (lower is better)
Translates to: IPTSVPHPKAWTRTEQGPGHRFH*AFSCPN
Trigger: GTTTGGGCAGGAAAAGGCCAAGTGAAATCTATGCCC...GGGTCCTTGTTCAGTTCTTGTCCAGGCCTTTGGGTGAGGGACACTGGTAGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp AGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATTGTCCGCCAGAACCCCCATaGCCAAGTCTGAGAAACTCA +
Preference number: 5 (lower is better)
Translates to: SCLAWSRGHPFASAMSYCPPEPP*PSLRNS
Trigger: TGAGTTTCTCAGACTTGGCAATGGGGGTTCTGGCGG...ACAATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp TGGGCTGTGGGCATAGGCACTCTTCACAGGGATTACATGAAACTGCATTTCCTCAGACCAGAGCAGGATTaGTACTCCAACCCCCGCCAG +
Preference number: 5 (lower is better)
Translates to: WAVGIGTLHRDYMKLHFLRPEQD*YSNPRQ
Trigger: CTGGCGGGGGTTGGAGTACAAATCCTGCTCTGGTCT...GAGGAAATGCAGTTTCATGTAATCCCTGTGAAGAGTGCCTATGCCCACAGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp CTCCAGGGCCTGTTGAGGATCTCCAGTCACAAGACCCCGGAGCTGTTGCACAGAGTCTTTCGCAAGCTATaGACTAAGGGGGAAGAGATT +
Preference number: 5 (lower is better)
Translates to: LQGLLRISSHKTPELLHRVFRKL*TKGEEI
Trigger: AATCTCTTCCCCCTTAGTCAATAGCTTGCGAAAGAC...TCTGTGCAACAGCTCCGGGGTCTTGTGACTGGAGATCCTCAACAGGCCCTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp GTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTAATGTTGGTTCGTTCAAAGGAGAGGGGGAGTGACTaGCCCAAGGCCACAGAGCTT +
Preference number: 5 (lower is better)
Translates to: VQTVSDSRLHWLMLVRSKERGSD*PKATEL
Trigger: AAGCTCTGTGGCCTTGGGCAAGTCACTCCCCCTCTC...CTTTGAACGAACCAACATTAGCCAGTGGAGACGACTGTCTGAGACAGTTTGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp GATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAACTCCCTCCTGTGCCGTCAGTGATTCCATaGCCCAGCACGGCTGCCCCT +
Preference number: 5 (lower is better)
Translates to: DVKARTYLKDDLAQLPPVPSVIP*PSTAAP
Trigger: AGGGGCAGCCGTGCTGGGCAATGGAATCACTGACGG...CACAGGAGGGAGTTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646146.1
CDS TCA 90 bp GAGACTGGGGTAACCTTTCTTGGAGCCTTAGACCCTGCCAGGCAGTaGGGGTCTGCGTGGTGTATTCCAACATCCAGAGTTTGTAGAAGA +
Preference number: 5 (lower is better)
Translates to: ETGVTFLGALDPARQ*GSAWCIPTSRVCRR
Trigger: TCTTCTACAAACTCTGGATGTTGGAATACACCACGCAGACCCTCACTGCCTGGCAGGGTCTAAGGCTCCAAGAAAGGTTACCCCAGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000322282.11
ENST00000450171.2
ENST00000456860.6
ENST00000525945.1
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS CCA 90 bp CGCTCCCAAAGACCAGGGCAAGCAGAGAAGGTGGGGCATCTCACCTaGTCAAGGAGCATCACTGAGGATTTGATGATTTCCCTCCATTTT +
Preference number: 5 (lower is better)
Translates to: RSQRPGQAEKVGHLT*SRSITEDLMISLHF
Trigger: AAAATGGAGGGAAATCATCAAATCCTCAGTGATGCTCCTTGACCAGGTGAGATGCCCCACCTTCTCTGCTTGCCCTGGTCTTTGGGAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532581.5
CDS-3UTR CAA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGCAAACTTGGATGGCATaGGGAATGAGGCGAGCTGTT +
Preference number: 5 (lower is better)
Translates to: GLCTCIAQASCSHPVPALQTWMA*GMRRAV
Trigger: AACAGCTCGCCTCATTCCCAATGCCATCCAAGTTTG...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp ATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCAGTATCCCATTGTGTaGAAGTCGTCGTCAGGGGGC +
Preference number: 5 (lower is better)
Translates to: IWSMYMYCTGLLQPPCSCQYPIV*KSSSGG
Trigger: GCCCCCTGACGACGACTTCAACACAATGGGATACTG...GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GCATCTTCTAGAAGAAAACACAGAGGTGAAGAGGATTGGGGCCAACCTGCTGGAGGACTGGCATCTGGCTaGGTCTCTATGCTGCTCTTG +
Preference number: 5 (lower is better)
Translates to: ASSRRKHRGEEDWGQPAGGLASG*VSMLLL
Trigger: CAAGAGCAGCATAGAGACCAAGCCAGATGCCAGTCC...TCCAGCAGGTTGGCCCCAATCCTCTTCACCTCTGTGTTTTCTTCTAGAAGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp ATCCCTACCAGTGTCCCTCACCCAAAGGCCTGGACAAGAACTGAACAAGGACCCGATGTTAGTGTGCTGTaGGTGATGGATTTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: IPTSVPHPKAWTRTEQGPDVSVL*VMDFLG
Trigger: GCCCAAGAAATCCATCACCAACAGCACACTAACATC...GGGTCCTTGTTCAGTTCTTGTCCAGGCCTTTGGGTGAGGGACACTGGTAGGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTTCTCCCCCATGATGTaGTCAATGGCGAGCTCCTTT +
Preference number: 5 (lower is better)
Translates to: GLCTCIAQASCSHPVPALFSPMM*SMASSF
Trigger: AAAGGAGCTCGCCATTGACAACATCATGGGGGAGAA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp AGTTTTGGCTTCTGGCTGTGCCAAGGGGGAGATTTCCAGCAGTCTGCACCATGCGTGGGGATGTCCTCATaGTCATTGAAGTCCAGTGAA +
Preference number: 5 (lower is better)
Translates to: SFGFWLCQGGDFQQSAPCVGMSS*SLKSSE
Trigger: TTCACTGGACTTCAATGACAATGAGGACATCCCCAC...GCATGGTGCAGACTGCTGGAAATCTCCCCCTTGGCACAGCCAGAAGCCAAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp AGCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTAGTGGGGATGTCCTCATaGTCATTGAAGTCCAGTGAA +
Preference number: 5 (lower is better)
Translates to: SQLPCLEQRPPFCFCNVLVGMSS*SLKSSE
Trigger: TTCACTGGACTTCAATGACAATGAGGACATCCCCAC...TAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GGAGGAGAGTATCCTTCAGAACACGAGTCTCGGGAGCCTGCCACCACACAATGCTTGTCCACGCTGAAGTaGAAGACTTCATTCACGTAC +
Preference number: 5 (lower is better)
Translates to: GGEYPSEHESREPATTQCLSTLK*KTSFTY
Trigger: GTACGTGAATGAAGTCTTCAACTTCAGCGTGGACAA...GCATTGTGTGGTGGCAGGCTCCCGAGACTCGTGTTCTGAAGGATACTCTCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp AGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAAGAAACCCTGAGTCGGCTCTaGTTCCGAGCCACACGGGTG +
Preference number: 5 (lower is better)
Translates to: RVFAGITLAQHFPSKSQETLSRL*FRATRV
Trigger: CACCCGTGTGGCTCGGAACAAGAGCCGACTCAGGGT...TTCTTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp TTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTGTTACCCTGAGTCGGCTCTaGTTCCGAGCCACACGGGTG +
Preference number: 5 (lower is better)
Translates to: FHGSSYFTLRFGWAALCVTLSRL*FRATRV
Trigger: CACCCGTGTGGCTCGGAACAAGAGCCGACTCAGGGT...AACACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GCAAATGAGGCTGGCAACCCATCTTGGTGCTCACCACTCACAGTGTTCTGTGGGCTTCTCTTTGGGAGATaGTCTGTGCATCTCAGCCAA +
Preference number: 5 (lower is better)
Translates to: ANEAGNPSWCSPLTVFCGLLFGR*SVHLSQ
Trigger: TTGGCTGAGATGCACAGACAATCTCCCAAAGAGAAG...CCCACAGAACACTGTGAGTGGTGAGCACCAAGATGGGTTGCCAGCCTCATTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTTGCTGGCCTTCTCTTaGGGAGATTGTCTGTGCATC +
Preference number: 5 (lower is better)
Translates to: GLCTCIAQASCSHPVPALLLAFS*GDCLCI
Trigger: GATGCACAGACAATCTCCCAAAGAGAAGGCCAGCAA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp ATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCGCACCGTTGTAGTCTaGCTGGCCTTCTCTTTGGGA +
Preference number: 5 (lower is better)
Translates to: IWSMYMYCTGLLQPPCSCRTVVV*LAFSLG
Trigger: TCCCAAAGAGAAGGCCAGCAAGACTACAACGGTGCG...GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp ATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCGAACCTGCCACATGTTaGATCCTGTGGCCCACATCC +
Preference number: 5 (lower is better)
Translates to: IWSMYMYCTGLLQPPCSCEPATC*ILWPTS
Trigger: GGATGTGGGCCACAGGATCAAACATGTGGCAGGTTC...GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGCACCCTGTTCCTGCCTaGTCAATGATAGCGATTCCT +
Preference number: 5 (lower is better)
Translates to: GLCTCIAQASCSHPVPALHPVPA*SMIAIP
Trigger: AGGAATCGCTATCATTGACAAGGCAGGAACAGGGTG...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGGTCTATGTACATGTATaGCACAGGCCTCTTGCAGCC +
Preference number: 5 (lower is better)
Translates to: GLCTCIAQASCSHPVPALVYVHV*HRPLAA
Trigger: GGCTGCAAGAGGCCTGTGCAATACATGTACATAGAC...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp AACCCCCAAGATGATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAAGCCGGCGTGCTGCGGTaGGAGTTACTGGCAGTGCTC +
Preference number: 5 (lower is better)
Translates to: NPQDDVKARTYLKDDLAQAGVLR*ELLAVL
Trigger: GAGCACTGCCAGTAACTCCAACCGCAGCACGCCGGC...TTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATCATCTTGGGGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529432.5
CDS-3UTR CAA 90 bp ACAGTTATAGATCCAAATACAGATGGCCAGACAACTCGACTGCACTCGACCCGTAGACCAGAGCAGGATTaGTACTCCAACCCCCGCCAG +
Preference number: 5 (lower is better)
Translates to: TVIDPNTDGQTTRLHSTRRPEQD*YSNPRQ
Trigger: CTGGCGGGGGTTGGAGTACAAATCCTGCTCTGGTCT...ACGGGTCGAGTGCAGTCGAGTTGTCTGGCCATCTGTATTTGGATCTATAACTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp TATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGAGACCAGAGCAGGATTaGTACTCCAACCCCCGCCAG +
Preference number: 5 (lower is better)
Translates to: YMVYVHVLHRPLAATLFLRPEQD*YSNPRQ
Trigger: CTGGCGGGGGTTGGAGTACAAATCCTGCTCTGGTCT...CAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp AGAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCGAGAGGGGGAGTGACTaGCCCAAGGCCACAGAGCTT +
Preference number: 5 (lower is better)
Translates to: RTTMFFKPSDVGEIVSISERGSD*PKATEL
Trigger: AAGCTCTGTGGCCTTGGGCAAGTCACTCCCCCTCTC...GCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp ACAGTTATAGATCCAAATACAGATGGCCAGACAACTCGACTGCACTCGACCCGTTGGCTCCAGGGCCTGTaGAGGATCTCCAGTCACAAG +
Preference number: 5 (lower is better)
Translates to: TVIDPNTDGQTTRLHSTRWLQGL*RISSHK
Trigger: CTTGTGACTGGAGATCCTCAACAGGCCCTGGAGCCA...ACGGGTCGAGTGCAGTCGAGTTGTCTGGCCATCTGTATTTGGATCTATAACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp ACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCCCCATCCCTCCCCACCTaGGAGTCTAGGTTGAGTTGG +
Preference number: 5 (lower is better)
Translates to: TTMFFKPSDVGEIVSISSPSLPT*ESRLSW
Trigger: CCAACTCAACCTAGACTCCAAGGTGGGGAGGGATGG...GGAGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp TTTACCATTTGTTCCACTTCTTCCTTCCTAGGGTTTAAGGAGAAGAAAAGGGTCGGTTGGGGAGCCGGCTaGGCGCTGCAGGGAGGTAGA +
Preference number: 5 (lower is better)
Translates to: FTICSTSSFLGFKEKKRVGWGAG*ALQGGR
Trigger: TCTACCTCCCTGCAGCGCCAAGCCGGCTCCCCAACC...GACCCTTTTCTTCTCCTTAAACCCTAGGAAGGAAGAAGTGGAACAAATGGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533341.3
CDS-3UTR CAA 90 bp CACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTTCCTTCGGTTCTCCATCATGTaGGCCGCCGGCATGGGGGCC +
Preference number: 5 (lower is better)
Translates to: HWKVSKPCCLYHLFHFFLRFSIM*AAGMGA
Trigger: GGCCCCCATGCCGGCGGCCAACATGATGGAGAACCG...AAGGAAGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CAA 90 bp ATTCCAGTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCCGGTTCTCCATCATGTaGGCCGCCGGCATGGGGGCC +
Preference number: 5 (lower is better)
Translates to: IPVNTGKLVSHAVFTICSRFSIM*AAGMGA
Trigger: GGCCCCCATGCCGGCGGCCAACATGATGGAGAACCG...GGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCACTGGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CAA 90 bp GAGTATTCCAGTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGAGCTGCAGGAACTCCTaGCCGGGGGCCAAGACGGCG +
Preference number: 5 (lower is better)
Translates to: EYSSEHWKVSKPCCLYHLSCRNS*PGAKTA
Trigger: CGCCGTCTTGGCCCCCGGCAAGGAGTTCCTGCAGCT...CAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCACTGGAATACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CAA 90 bp CACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTTCCTTAGCTGCAGGAACTCCTaGCCGGGGGCCAAGACGGCG +
Preference number: 5 (lower is better)
Translates to: HWKVSKPCCLYHLFHFFLSCRNS*PGAKTA
Trigger: CGCCGTCTTGGCCCCCGGCAAGGAGTTCCTGCAGCT...AAGGAAGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CAA 90 bp TCCAGTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACCTGGGTGTGGAGCAGTaGGACCACGGGGTGTCCTCG +
Preference number: 5 (lower is better)
Translates to: SSEHWKVSKPCCLYHLFHLGVEQ*DHGVSS
Trigger: CGAGGACACCCCGTGGTCCAACTGCTCCACACCCAG...GTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CAA 90 bp CTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAACTGGTCTCCCCTGGCTaGACTGTGGATGGGTGGCCT +
Preference number: 5 (lower is better)
Translates to: LRVFAGITLAQHFPSKSQLVSPG*TVDGWP
Trigger: AGGCCACCCATCCACAGTCAAGCCAGGGGAGACCAG...TTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646146.1
CDS CCA 90 bp TGGGCAGCTGTGGACTGGCATCTGGCTTGGTCTCTATGCTGCTCTTaGATGAGCTGTCATTCACTTCATTCTCTTCCACAGGGATCTCTT +
Preference number: 5 (lower is better)
Translates to: WAAVDWHLAWSLCCS*MSCHSLHSLPQGSL
Trigger: AAGAGATCCCTGTGGAAGAGAATGAAGTGAATGACAGCTCATCCAAGAGCAGCATAGAGACCAAGCCAGATGCCAGTCCACAGCTGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000322282.11
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000534764.1
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS CCA 90 bp CTCAGGAGGTACTTGTGGGACCCAGCCCCAGTCAAACCCTTCCTCTaGGGTTGTTCAACATTGCAAGGAACCATATGTTCCCAATATCTG +
Preference number: 5 (lower is better)
Translates to: LRRYLWDPAPVKPFL*GCSTLQGTICSQYL
Trigger: CAGATATTGGGAACATATGGTTCCTTGCAATGTTGAACAACCCCAGAGGAAGGGTTTGACTGGGGCTGGGTCCCACAAGTACCTCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525945.1
CDS CCA 90 bp GCAACTCTCTGCAGAACCATTTTCCTATTCTGTATTCTGGGAAGTTaGTTGGGTGGGTTGAGGATCCTCAGGGATGCCCATGAGCCTCAG +
Preference number: 5 (lower is better)
Translates to: ATLCRTIFLFCILGS*LGGLRILRDAHEPQ
Trigger: CTGAGGCTCATGGGCATCCCTGAGGATCCTCAACCCACCCAACCAACTTCCCAGAATACAGAATAGGAAAATGGTTCTGCAGAGAGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525945.1
CDS CCA 90 bp TGGGAGATTGTCTGTGCATCTCAGCCAAATAAGTGCTCTCCGTTTTaGCCAGCTCGCTCTCTATCAGAGACAAAAGGACCACAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: WEIVCASQPNKCSPF*PARSLSETKGPQER
Trigger: CCTCTCCTGTGGTCCTTTTGTCTCTGATAGAGAGCGAGCTGGCCAAAACGGAGAGCACTTATTTGGCTGAGATGCACAGACAATCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525945.1
CDS-3UTR CAA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGAGGTCCCAGGACATATaGGAAAAGATGACGAAGTCC +
Preference number: 5 (lower is better)
Translates to: GLCTCIAQASCSHPVPALRSQDI*EKMTKS
Trigger: GGACTTCGTCATCTTTTCCAATATGTCCTGGGACCT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456860.6
ENST00000529750.5
CDS-3UTR CAA 90 bp TGTCTTATTGTATTGAGAGAAGCAAGGAGGGCTGAAGAACGACAATGTTCTTTACCTGGTTCTGCGGGGTaGGCGAGCGAGACCGCTTCC +
Preference number: 5 (lower is better)
Translates to: CLIVLREARRAEERQCSLPGSAG*ASETAS
Trigger: GGAAGCGGTCTCGCTCGCCAACCCCGCAGAACCAGG...TAAAGAACATTGTCGTTCTTCAGCCCTCCTTGCTTCTCTCAATACAATAAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000638157.1
CDS-3UTR CAA 90 bp TTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTGTTCTTTTCTTGGAATTCTaGCCGCCGCTCCGGCCGGAC +
Preference number: 5 (lower is better)
Translates to: FHGSSYFTLRFGWAALCVLFLEF*PPLRPD
Trigger: GTCCGGCCGGAGCGGCGGCAAGAATTCCAAGAAAAG...AACACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000638157.1
CDS-3UTR CAA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGGTCTCTATGCTGCTCTaGGATGAGCTGTCATTCACT +
Preference number: 5 (lower is better)
Translates to: GLCTCIAQASCSHPVPALVSMLL*DELSFT
Trigger: AGTGAATGACAGCTCATCCAAGAGCAGCATAGAGAC...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp ATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCTTGGTGATGGATTTCTaGGGCAGCTGTGGACTGGCA +
Preference number: 5 (lower is better)
Translates to: IWSMYMYCTGLLQPPCSCLVMDF*GSCGLA
Trigger: TGCCAGTCCACAGCTGCCCAAGAAATCCATCACCAA...GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGGATGTTAGTGTGCTGTaGGTGATGGATTTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: GLCTCIAQASCSHPVPALDVSVL*VMDFLG
Trigger: GCCCAAGAAATCCATCACCAACAGCACACTAACATC...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp TATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTCTCCCCCATGATGTaGTCAATGGCGAGCTCCTTT +
Preference number: 5 (lower is better)
Translates to: YGLCTCIAQASCSHPVPAFSPMM*SMASSF
Trigger: AAAGGAGCTCGCCATTGACAACATCATGGGGGAGAA...GGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGGTGGGGATGTCCTCATaGTCATTGAAGTCCAGTGAA +
Preference number: 5 (lower is better)
Translates to: GLCTCIAQASCSHPVPALVGMSS*SLKSSE
Trigger: TTCACTGGACTTCAATGACAATGAGGACATCCCCAC...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp AGCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATTGTCCACGCTGAAGTaGAAGACTTCATTCACGTAC +
Preference number: 5 (lower is better)
Translates to: SQLPCLEQRPPFCFCNVLLSTLK*KTSFTY
Trigger: GTACGTGAATGAAGTCTTCAACTTCAGCGTGGACAA...TAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp TTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTCTCTCCTGGCTCGCCTaGTACATGGTCTGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: LYGLCTCIAQASCSHPVPLSWLA*YMVCVS
Trigger: GGAGACACAGACCATGTACAAGGCGAGCCAGGAGAG...AGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGCTTCTCTTTGGGAGATaGTCTGTGCATCTCAGCCAA +
Preference number: 5 (lower is better)
Translates to: GLCTCIAQASCSHPVPALLLFGR*SVHLSQ
Trigger: TTGGCTGAGATGCACAGACAATCTCCCAAAGAGAAG...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp ACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCCTCCCGCACCGTTGTAGTCTaGCTGGCCTTCTCTTTGGGA +
Preference number: 5 (lower is better)
Translates to: TMFFKPSDVGEIVSISSSRTVVV*LAFSLG
Trigger: TCCCAAAGAGAAGGCCAGCAAGACTACAACGGTGCG...GGAGGAGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GTACTAGCAGTAAGTTTTCTGACCTTGCGCACAGCGCCAGGCAAAGTACAGTTAGAACCTGCCACATGTTaGATCCTGTGGCCCACATCC +
Preference number: 5 (lower is better)
Translates to: VLAVSFLTLRTAPGKVQLEPATC*ILWPTS
Trigger: GGATGTGGGCCACAGGATCAAACATGTGGCAGGTTC...TAACTGTACTTTGCCTGGCGCTGTGCGCAAGGTCAGAAAACTTACTGCTAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp AGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAAGAATGCAGGTGGAAACCGTaGGGGGTGTCCTCCGGGATA +
Preference number: 5 (lower is better)
Translates to: RVFAGITLAQHFPSKSQECRWKP*GVSSGI
Trigger: TATCCCGGAGGACACCCCCAACGGTTTCCACCTGCA...TTCTTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp ATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTCACCCTGTTCCTGCCTaGTCAATGATAGCGATTCCT +
Preference number: 5 (lower is better)
Translates to: MVYVHVLHRPLAATLFLPHPVPA*SMIAIP
Trigger: AGGAATCGCTATCATTGACAAGGCAGGAACAGGGTG...AGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp ACACATGCACCTTTGCCAAATCCTTCCCTCCAGTGGCTCAGATGCTTTTTCTATTATTGCACAGGCCTCTaGCAGCCACCCTGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: THAPLPNPSLQWLRCFFYYCTGL*QPPCSC
Trigger: GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATA...ATAGAAAAAGCATCTGAGCCACTGGAGGGAAGGATTTGGCAAAGGTGCATGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp GATTTGGCTGGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACTATTGCACAGGCCTCTaGCAGCCACCCTGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: DLAGQPCVFLGTSSKFSDYCTGL*QPPCSC
Trigger: GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATA...GTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCCAGCCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp TATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCGTCTATGTACATGTATaGCACAGGCCTCTTGCAGCC +
Preference number: 5 (lower is better)
Translates to: YGLCTCIAQASCSHPVPAVYVHV*HRPLAA
Trigger: GGCTGCAAGAGGCCTGTGCAATACATGTACATAGAC...GGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp ACCTTAAGCAATGCCGTCTTAAGACTTCTTTTTGAGACCTTAGGGTCTTCGCAGGCTGGGGGCGCTTCTTaGCTCTGCTGTTTCACACCG +
Preference number: 5 (lower is better)
Translates to: TLSNAVLRLLFETLGSSQAGGAS*LCCFTP
Trigger: CGGTGTGAAACAGCAGAGCAAAGAAGCGCCCCCAGC...CTGCGAAGACCCTAAGGTCTCAAAAAGAAGTCTTAAGACGGCATTGCTTAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000529432.5
CDS-3UTR CAA 90 bp AGCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTACTCCACTGGCTAATGTaGGTTCGTTCAAAGAGCAAA +
Preference number: 5 (lower is better)
Translates to: SQLPCLEQRPPFCFCNVLLHWLM*VRSKSK
Trigger: TTTGCTCTTTGAACGAACCAACATTAGCCAGTGGAG...TAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp ATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTCAAACACATGCACCTTaGCCAAATCCTTCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: MVYVHVLHRPLAATLFLPQTHAP*PNPSLQ
Trigger: CTGGAGGGAAGGATTTGGCAAAGGTGCATGTGTTTG...AGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp ATATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTCCTCACCCTCCTCCCTaGGAGGATCACCTGGGCATG +
Preference number: 5 (lower is better)
Translates to: IFIWSMYMYCTGLLQPPCPHPPP*EDHLGM
Trigger: CATGCCCAGGTGATCCTCCAAGGGAGGAGGGTGAGG...ACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp TGGGCTGTGGGCATAGGCACTCTTCACAGGGATTACATGAAACTGCATTTCCTCCCTCTTGAGCTCTCTTaGTCCTCCCCATGTCATTCC +
Preference number: 5 (lower is better)
Translates to: WAVGIGTLHRDYMKLHFLPLELS*SSPCHS
Trigger: GGAATGACATGGGGAGGACAAAGAGAGCTCAAGAGG...GAGGAAATGCAGTTTCATGTAATCCCTGTGAAGAGTGCCTATGCCCACAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp TATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCAAGACCCCGGAGCTGTaGCACAGAACATCAAAACAG +
Preference number: 5 (lower is better)
Translates to: YGLCTCIAQASCSHPVPAKTPEL*HRTSKQ
Trigger: CTGTTTTGATGTTCTGTGCAACAGCTCCGGGGTCTT...GGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGGGGAGCCACAAGCTATaGTTGGCAAAAATGGCTGTT +
Preference number: 5 (lower is better)
Translates to: GLCTCIAQASCSHPVPALGSHKL*LAKMAV
Trigger: AACAGCCATTTTTGCCAACAATAGCTTGTGGCTCCC...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp CTGTACTTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGCCATCCCTCCCCACCTaGGAGTCTAGGTTGAGTTGG +
Preference number: 5 (lower is better)
Translates to: LYFHGSSYFTLRFGWAALPSLPT*ESRLSW
Trigger: CCAACTCAACCTAGACTCCAAGGTGGGGAGGGATGG...CAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAAGTACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTTCGTTCAGCAGACCAGGTaGGGGAGCCGGCTTGGCGCT +
Preference number: 5 (lower is better)
Translates to: EHWKVSKPCCLYHLFHFFVQQTR*GSRLGA
Trigger: AGCGCCAAGCCGGCTCCCCAACCTGGTCTGCTGAAC...GAAGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533341.3
CDS-3UTR CAA 90 bp CACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTTCCTTCCCTCGCGCGCCCGCTaGTTTTTCTTCCGCTGCGCT +
Preference number: 5 (lower is better)
Translates to: HWKVSKPCCLYHLFHFFLPSRAR*FFFRCA
Trigger: AGCGCAGCGGAAGAAAAACAAGCGGGCGCGCGAGGG...AAGGAAGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CAA 90 bp GTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTCCCTCGCGCGCCCGCTaGTTTTTCTTCCGCTGCGCT +
Preference number: 5 (lower is better)
Translates to: VNTGKLVSHAVFTICSTSPSRAR*FFFRCA
Trigger: AGCGCAGCGGAAGAAAAACAAGCGGGCGCGCGAGGG...AGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CAA 90 bp CACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTTCCTTTTCATGCGGCGCATCTaGAAGCGCCGGCGGCGAAGC +
Preference number: 5 (lower is better)
Translates to: HWKVSKPCCLYHLFHFFLFMRRI*KRRRRS
Trigger: GCTTCGCCGCCGGCGCTTCAAGATGCGCCGCATGAA...AAGGAAGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CAA 90 bp TGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTTCCTTCCTTTCATGCGGCGCATCTaGAAGCGCCGGCGGCGAAGC +
Preference number: 5 (lower is better)
Translates to: WKVSKPCCLYHLFHFFLPFMRRI*KRRRRS
Trigger: GCTTCGCCGCCGGCGCTTCAAGATGCGCCGCATGAA...AGGAAGGAAGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CAA 90 bp TGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCTTCCTTCCTCTGGGTGTGGAGCAGTaGGACCACGGGGTGTCCTCG +
Preference number: 5 (lower is better)
Translates to: WKVSKPCCLYHLFHFFLPLGVEQ*DHGVSS
Trigger: CGAGGACACCCCGTGGTCCAACTGCTCCACACCCAG...AGGAAGGAAGAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS TCA 90 bp CAGCTGTGGACTGGCATCTGGCTTGGTCTCTATGCTGCTCTTGGATaGGCTGTCATTCACTTCATTCTCTTCCACAGGGATCTCTTCACA +
Preference number: 5 (lower is better)
Translates to: QLWTGIWLGLYAALG*AVIHFILFHRDLFT
Trigger: TGTGAAGAGATCCCTGTGGAAGAGAATGAAGTGAATGACAGCTCATCCAAGAGCAGCATAGAGACCAAGCCAGATGCCAGTCCACAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000322282.11
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000534764.1
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS GCA 90 bp TGGATTTCTTGGGCAGCTGTGGACTGGCATCTGGCTTGGTCTCTATaGTGCTCTTGGATGAGCTGTCATTCACTTCATTCTCTTCCACAG +
Preference number: 5 (lower is better)
Translates to: WISWAAVDWHLAWSL*CSWMSCHSLHSLPQ
Trigger: CTGTGGAAGAGAATGAAGTGAATGACAGCTCATCCAAGAGCAGCATAGAGACCAAGCCAGATGCCAGTCCACAGCTGCCCAAGAAATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000322282.11
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000534764.1
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS GCA 90 bp TGGCCTTCTCTTTGGGAGATTGTCTGTGCATCTCAGCCAAATAAGTaGTCTCCGTTTTGGCCAGCTCGCTCTCTAAATGGCGGAAGTAGT +
Preference number: 5 (lower is better)
Translates to: WPSLWEIVCASQPNK*SPFWPARSLNGGSS
Trigger: ACTACTTCCGCCATTTAGAGAGCGAGCTGGCCAAAACGGAGAGCACTTATTTGGCTGAGATGCACAGACAATCTCCCAAAGAGAAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000322282.11
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS GCA 90 bp GGTGTGGGAGGGCTCCAAAAATGGAGCTTCCTTCAGTCTCAGGGATaGAAAGCCCTTCTGGCACATCACTGTGTCCATATACAGAAGATT +
Preference number: 5 (lower is better)
Translates to: GVGGLQKWSFLQSQG*KALLAHHCVHIQKI
Trigger: AATCTTCTGTATATGGACACAGTGATGTGCCAGAAGGGCTTTGCATCCCTGAGACTGAAGGAAGCTCCATTTTTGGAGCCCTCCCACACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS-3UTR CAA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGGCAGTGCAGGAGAGCTaGAATCCTTTCATTAGTACA +
Preference number: 5 (lower is better)
Translates to: GLCTCIAQASCSHPVPALAVQES*NPFIST
Trigger: TGTACTAATGAAAGGATTCAAGCTCTCCTGCACTGC...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456860.6
ENST00000529750.5
CDS-3UTR CAA 90 bp ATATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTCTTTTCTTGGAATTCTaGCCGCCGCTCCGGCCGGAC +
Preference number: 5 (lower is better)
Translates to: IFIWSMYMYCTGLLQPPCLFLEF*PPLRPD
Trigger: GTCCGGCCGGAGCGGCGGCAAGAATTCCAAGAAAAG...ACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR CAA 90 bp ATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCAAACTTGGATGGCATaGGGAATGAGGCGAGCTGTT +
Preference number: 5 (lower is better)
Translates to: IWSMYMYCTGLLQPPCSCQTWMA*GMRRAV
Trigger: AACAGCTCGCCTCATTCCCAATGCCATCCAAGTTTG...GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GGTTGGGGGAATGAAAGTCAAGGATGTCAAGGATGTCAAGTGGTGAATGGGATGTTGGTGATGGATTTCTaGGGCAGCTGTGGACTGGCA +
Preference number: 5 (lower is better)
Translates to: GWGNESQGCQGCQVVNGMLVMDF*GSCGLA
Trigger: TGCCAGTCCACAGCTGCCCAAGAAATCCATCACCAA...CATCCCATTCACCACTTGACATCCTTGACATCCTTGACTTTCATTCCCCCAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp TGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGATGTTAGTGTGCTGTaGGTGATGGATTTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: WSMYMYCTGLLQPPCSCLDVSVL*VMDFLG
Trigger: GCCCAAGAAATCCATCACCAACAGCACACTAACATC...AAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp TATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCGTGGGGATGTCCTCATaGTCATTGAAGTCCAGTGAA +
Preference number: 5 (lower is better)
Translates to: YGLCTCIAQASCSHPVPAVGMSS*SLKSSE
Trigger: TTCACTGGACTTCAATGACAATGAGGACATCCCCAC...GGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGTTGTCCACGCTGAAGTaGAAGACTTCATTCACGTAC +
Preference number: 5 (lower is better)
Translates to: GLCTCIAQASCSHPVPALLSTLK*KTSFTY
Trigger: GTACGTGAATGAAGTCTTCAACTTCAGCGTGGACAA...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp ATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTCTCCTGGCTCGCCTaGTACATGGTCTGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: IYMVYVHVLHRPLAATLFLSWLA*YMVCVS
Trigger: GGAGACACAGACCATGTACAAGGCGAGCCAGGAGAG...GAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp ATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTCTTCTCTTTGGGAGATaGTCTGTGCATCTCAGCCAA +
Preference number: 5 (lower is better)
Translates to: MVYVHVLHRPLAATLFLPLLFGR*SVHLSQ
Trigger: TTGGCTGAGATGCACAGACAATCTCCCAAAGAGAAG...AGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp TTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTCGCACCGTTGTAGTCTaGCTGGCCTTCTCTTTGGGA +
Preference number: 5 (lower is better)
Translates to: LYGLCTCIAQASCSHPVPRTVVV*LAFSLG
Trigger: TCCCAAAGAGAAGGCCAGCAAGACTACAACGGTGCG...AGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp TTCTATGTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTAATGTTGGTTCGTGAACCTGCCACATGTTaGATCCTGTGGCCCACATCC +
Preference number: 5 (lower is better)
Translates to: FYVQTVSDSRLHWLMLVREPATC*ILWPTS
Trigger: GGATGTGGGCCACAGGATCAAACATGTGGCAGGTTC...ACGAACCAACATTAGCCAGTGGAGACGACTGTCTGAGACAGTTTGCACATAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp ATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCATAACCAGCAGCAGCTaGGACACGCTCTGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: IYMVYVHVLHRPLAATLFITSSS*DTLCRW
Trigger: CCACCTGCAGAGCGTGTCCAAGCTGCTGCTGGTTAT...GAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp CTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAATATTGCACAGGCCTCTaGCAGCCACCCTGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: LRVFAGITLAQHFPSKSQYCTGL*QPPCSC
Trigger: GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATA...TTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp TTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTGTTGGCTGGCAACCCATCTaGGTGCTCACCACTCACAGT +
Preference number: 5 (lower is better)
Translates to: FHGSSYFTLRFGWAALCVGWQPI*VLTTHS
Trigger: ACTGTGAGTGGTGAGCACCAAGATGGGTTGCCAGCC...AACACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp GATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAACTCCCTCCTGTGCTGAGAAACTCAGGATaGGGAATGGCTCCCGTAGGG +
Preference number: 5 (lower is better)
Translates to: DVKARTYLKDDLAQLPPVLRNSG*GMAPVG
Trigger: CCCTACGGGAGCCATTCCCAATCCTGAGTTTCTCAG...CACAGGAGGGAGTTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp TATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTTCTGGGAATAGTTTaGGCTTCTGGCTGTGCCAAG +
Preference number: 5 (lower is better)
Translates to: YGLCTCIAQASCSHPVPAFLGIV*ASGCAK
Trigger: CTTGGCACAGCCAGAAGCCAAAACTATTCCCAGAAA...GGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp GTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTAATGTTGGTTCGTTCAAAGCGCACCATGATTAGCTaGTCTGAGGCCAGTCTTGTC +
Preference number: 5 (lower is better)
Translates to: VQTVSDSRLHWLMLVRSKRTMIS*SEASLV
Trigger: GACAAGACTGGCCTCAGACAAGCTAATCATGGTGCG...CTTTGAACGAACCAACATTAGCCAGTGGAGACGACTGTCTGAGACAGTTTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp GCTCAGATGCTTTTTCTATGTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTCCTCTTGAGCTCTCTTaGTCCTCCCCATGTCATTCC +
Preference number: 5 (lower is better)
Translates to: AQMLFLCANCLRQSSPLAPLELS*SSPCHS
Trigger: GGAATGACATGGGGAGGACAAAGAGAGCTCAAGAGG...AGCCAGTGGAGACGACTGTCTGAGACAGTTTGCACATAGAAAAAGCATCTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp TTGAGTTGGGGAAAAAGCACCATGGGTTTGGGAAGATGGTCTGGTCCATGCAGAAAGACCCCGGAGCTGTaGCACAGAACATCAAAACAG +
Preference number: 5 (lower is better)
Translates to: LSWGKSTMGLGRWSGPCRKTPEL*HRTSKQ
Trigger: CTGTTTTGATGTTCTGTGCAACAGCTCCGGGGTCTT...TCTGCATGGACCAGACCATCTTCCCAAACCCATGGTGCTTTTTCCCCAACTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp CTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAATGGCTCCAGGGCCTGTaGAGGATCTCCAGTCACAAG +
Preference number: 5 (lower is better)
Translates to: LRVFAGITLAQHFPSKSQWLQGL*RISSHK
Trigger: CTTGTGACTGGAGATCCTCAACAGGCCCTGGAGCCA...TTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp GACTCTTTCATGAATCTCCACAAGCTCTGCCTGGAGCTGGTGGGACTCTTTTGGGCAGAGGCCACCCTTTaGCTTCTGCAATGTCTTATT +
Preference number: 5 (lower is better)
Translates to: DSFMNLHKLCLELVGLFWAEATL*LLQCLI
Trigger: AATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGC...CCAAAAGAGTCCCACCAGCTCCAGGCAGAGCTTGTGGAGATTCATGAAAGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp GCAAATGAGGCTGGCAACCCATCTTGGTGCTCACCACTCACAGTGTTCTGTGGGGCAAAAATGGCTGTTTaGACTATGCAATCTCAGCAC +
Preference number: 5 (lower is better)
Translates to: ANEAGNPSWCSPLTVFCGAKMAV*TMQSQH
Trigger: GTGCTGAGATTGCATAGTCAAAACAGCCATTTTTGC...CCCACAGAACACTGTGAGTGGTGAGCACCAAGATGGGTTGCCAGCCTCATTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTGTGGACTTGCTGCCCTaGCAGCTACCCCAGCTGTCA +
Preference number: 5 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVVDLLP*QLPQLS
Trigger: TGACAGCTGGGGTAGCTGCAAGGGCAGCAAGTCCAC...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS-3UTR CAA 90 bp ATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCGAGTTACTGGCAGTGTaGGCTCGCAGAAAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: IYMVYVHVLHRPLAATLFELLAV*ARRKAS
Trigger: GCTGGCCTTTCTGCGAGCCAACACTGCCAGTAACTC...GAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS GCA 90 bp TGGCCTTCTCTTTGGGAGATTGTCTGTGCATCTCAGCCAAATAAGTaGTCTCCGTTTTGGCCAGCTCGCTCTCTATCAGAGACAAAAGGA +
Preference number: 5 (lower is better)
Translates to: WPSLWEIVCASQPNK*SPFWPARSLSETKG
Trigger: TCCTTTTGTCTCTGATAGAGAGCGAGCTGGCCAAAACGGAGAGCACTTATTTGGCTGAGATGCACAGACAATCTCCCAAAGAGAAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525945.1
CDS-3UTR CAA 90 bp GTACTAGCAGTAAGTTTTCTGACCTTGCGCACAGCGCCAGGCAAAGTACAGTTACAAACTTGGATGGCATaGGGAATGAGGCGAGCTGTT +
Preference number: 5 (lower is better)
Translates to: VLAVSFLTLRTAPGKVQLQTWMA*GMRRAV
Trigger: AACAGCTCGCCTCATTCCCAATGCCATCCAAGTTTG...TAACTGTACTTTGCCTGGCGCTGTGCGCAAGGTCAGAAAACTTACTGCTAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp CTGTACTTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGAAGTGCCAGAGCTCCTaGGGACACAGAGGCTTTTCA +
Preference number: 5 (lower is better)
Translates to: LYFHGSSYFTLRFGWAALKCQSS*GHRGFS
Trigger: TGAAAAGCCTCTGTGTCCCAAGGAGCTCTGGCACTT...CAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAAGTACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp AGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAAGAACAGTATCCCATTGTGTaGAAGTCGTCGTCAGGGGGC +
Preference number: 5 (lower is better)
Translates to: RVFAGITLAQHFPSKSQEQYPIV*KSSSGG
Trigger: GCCCCCTGACGACGACTTCAACACAATGGGATACTG...TTCTTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp TTGAGTTGGGGAAAAAGCACCATGGGTTTGGGAAGATGGTCTGGTCCATGCAGAGTCTCTATGCTGCTCTaGGATGAGCTGTCATTCACT +
Preference number: 5 (lower is better)
Translates to: LSWGKSTMGLGRWSGPCRVSMLL*DELSFT
Trigger: AGTGAATGACAGCTCATCCAAGAGCAGCATAGAGAC...TCTGCATGGACCAGACCATCTTCCCAAACCCATGGTGCTTTTTCCCCAACTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp ATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCGTCTCTATGCTGCTCTaGGATGAGCTGTCATTCACT +
Preference number: 5 (lower is better)
Translates to: IWSMYMYCTGLLQPPCSCVSMLL*DELSFT
Trigger: AGTGAATGACAGCTCATCCAAGAGCAGCATAGAGAC...GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp ACCTTAAGCAATGCCGTCTTAAGACTTCTTTTTGAGACCTTAGGGTCTTCGCAGGGACTGGCATCTGGCTaGGTCTCTATGCTGCTCTTG +
Preference number: 5 (lower is better)
Translates to: TLSNAVLRLLFETLGSSQGLASG*VSMLLL
Trigger: CAAGAGCAGCATAGAGACCAAGCCAGATGCCAGTCC...CTGCGAAGACCCTAAGGTCTCAAAAAGAAGTCTTAAGACGGCATTGCTTAAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp GAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTTTGGTGATGGATTTCTaGGGCAGCTGTGGACTGGCA +
Preference number: 5 (lower is better)
Translates to: ERQCSLSLQMLGRSSASALVMDF*GSCGLA
Trigger: TGCCAGTCCACAGCTGCCCAAGAAATCCATCACCAA...AGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp TTGAGTTGGGGAAAAAGCACCATGGGTTTGGGAAGATGGTCTGGTCCATGCAGAGATGTTAGTGTGCTGTaGGTGATGGATTTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: LSWGKSTMGLGRWSGPCRDVSVL*VMDFLG
Trigger: GCCCAAGAAATCCATCACCAACAGCACACTAACATC...TCTGCATGGACCAGACCATCTTCCCAAACCCATGGTGCTTTTTCCCCAACTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCTCTCCTGGCTCGCCTaGTACATGGTCTGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVLSWLA*YMVCVS
Trigger: GGAGACACAGACCATGTACAAGGCGAGCCAGGAGAG...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp TATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGTTGCTGGCCTTCTCTTaGGGAGATTGTCTGTGCATC +
Preference number: 5 (lower is better)
Translates to: YMVYVHVLHRPLAATLFLLLAFS*GDCLCI
Trigger: GATGCACAGACAATCTCCCAAAGAGAAGGCCAGCAA...CAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp CTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAACGCACCGTTGTAGTCTaGCTGGCCTTCTCTTTGGGA +
Preference number: 5 (lower is better)
Translates to: LRVFAGITLAQHFPSKSQRTVVV*LAFSLG
Trigger: TCCCAAAGAGAAGGCCAGCAAGACTACAACGGTGCG...TTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp TACTTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTCGCACCGTTGTAGTCTaGCTGGCCTTCTCTTTGGGA +
Preference number: 5 (lower is better)
Translates to: YFHGSSYFTLRFGWAALCRTVVV*LAFSLG
Trigger: TCCCAAAGAGAAGGCCAGCAAGACTACAACGGTGCG...ACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GCCAGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATAGCATCACTGAGGATTaGATGATTTCCCTCCATTTT +
Preference number: 5 (lower is better)
Translates to: ASCLAWSRGHPFASAMSYSITED*MISLHF
Trigger: AAAATGGAGGGAAATCATCAAATCCTCAGTGATGCT...ATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GGTTGGGGGAATGAAAGTCAAGGATGTCAAGGATGTCAAGTGGTGAATGGGATGCACCCTGTTCCTGCCTaGTCAATGATAGCGATTCCT +
Preference number: 5 (lower is better)
Translates to: GWGNESQGCQGCQVVNGMHPVPA*SMIAIP
Trigger: AGGAATCGCTATCATTGACAAGGCAGGAACAGGGTG...CATCCCATTCACCACTTGACATCCTTGACATCCTTGACTTTCATTCCCCCAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp TGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGACTACTTCTGGAAGTaGCCTAAACCCAAAGAATGG +
Preference number: 5 (lower is better)
Translates to: WSMYMYCTGLLQPPCSCLDYFWK*PKPKEW
Trigger: CCATTCTTTGGGTTTAGGCAACTTCCAGAAGTAGTC...AAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS-3UTR CAA 90 bp AACCCCCAAGATGATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAATATTGCACAGGCCTCTaGCAGCCACCCTGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: NPQDDVKARTYLKDDLAQYCTGL*QPPCSC
Trigger: GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATA...TTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATCATCTTGGGGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp TATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTCGCAGGCATAACTTaGGCTCAACATTTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: YGLCTCIAQASCSHPVPAFAGIT*AQHFPS
Trigger: AGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAA...GGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTGGCTGGCAACCCATCTaGGTGCTCACCACTCACAGT +
Preference number: 5 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVGWQPI*VLTTHS
Trigger: ACTGTGAGTGGTGAGCACCAAGATGGGTTGCCAGCC...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp AACCCCCAAGATGATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAAGGCTGGCAACCCATCTaGGTGCTCACCACTCACAGT +
Preference number: 5 (lower is better)
Translates to: NPQDDVKARTYLKDDLAQGWQPI*VLTTHS
Trigger: ACTGTGAGTGGTGAGCACCAAGATGGGTTGCCAGCC...TTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATCATCTTGGGGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp ATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTCTCCACTGGCTAATGTaGGTTCGTTCAAAGAGCAAA +
Preference number: 5 (lower is better)
Translates to: MVYVHVLHRPLAATLFLPLHWLM*VRSKSK
Trigger: TTTGCTCTTTGAACGAACCAACATTAGCCAGTGGAG...AGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp ACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCCTCCCAAACACATGCACCTTaGCCAAATCCTTCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: TMFFKPSDVGEIVSISSSQTHAP*PNPSLQ
Trigger: CTGGAGGGAAGGATTTGGCAAAGGTGCATGTGTTTG...GGAGGAGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp ACAGTTATAGATCCAAATACAGATGGCCAGACAACTCGACTGCACTCGACCCGTGGGCATAGATTTCACTaGGCCTTTTCCTGCCCAAAC +
Preference number: 5 (lower is better)
Translates to: TVIDPNTDGQTTRLHSTRGHRFH*AFSCPN
Trigger: GTTTGGGCAGGAAAAGGCCAAGTGAAATCTATGCCC...ACGGGTCGAGTGCAGTCGAGTTGTCTGGCCATCTGTATTTGGATCTATAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp GATTTGGCTGGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACGGTCTGCTCTGTCACTaGACTCCCAACAAAGAACCC +
Preference number: 5 (lower is better)
Translates to: DLAGQPCVFLGTSSKFSDGLLCH*TPNKEP
Trigger: GGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGACC...GTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCCAGCCAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp AGAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCCGCACCATGATTAGCTaGTCTGAGGCCAGTCTTGTC +
Preference number: 5 (lower is better)
Translates to: RTTMFFKPSDVGEIVSISRTMIS*SEASLV
Trigger: GACAAGACTGGCCTCAGACAAGCTAATCATGGTGCG...GCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp GACCTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCTCCTGGCAGAGCAATaGAGAAAGTCCACCCAGTCT +
Preference number: 5 (lower is better)
Translates to: DLRVFAGITLAQHFPSKSLLAEQ*RKSTQS
Trigger: AGACTGGGTGGACTTTCTCAATTGCTCTGCCAGGAG...GCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp ACACATGCACCTTTGCCAAATCCTTCCCTCCAGTGGCTCAGATGCTTTTTCTATCTCCTGGCAGAGCAATaGAGAAAGTCCACCCAGTCT +
Preference number: 5 (lower is better)
Translates to: THAPLPNPSLQWLRCFFYLLAEQ*RKSTQS
Trigger: AGACTGGGTGGACTTTCTCAATTGCTCTGCCAGGAG...ATAGAAAAAGCATCTGAGCCACTGGAGGGAAGGATTTGGCAAAGGTGCATGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp GGTTGGGGGAATGAAAGTCAAGGATGTCAAGGATGTCAAGTGGTGAATGGGATGAAGACCCCGGAGCTGTaGCACAGAACATCAAAACAG +
Preference number: 5 (lower is better)
Translates to: GWGNESQGCQGCQVVNGMKTPEL*HRTSKQ
Trigger: CTGTTTTGATGTTCTGTGCAACAGCTCCGGGGTCTT...CATCCCATTCACCACTTGACATCCTTGACATCCTTGACTTTCATTCCCCCAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp CTGTACTTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGGTAAGTTTTCTGACCTaGCGCACAGCGCCAGGCAAA +
Preference number: 5 (lower is better)
Translates to: LYFHGSSYFTLRFGWAALVSFLT*RTAPGK
Trigger: TTTGCCTGGCGCTGTGCGCAAGGTCAGAAAACTTAC...CAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAAGTACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp AGAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCGTAAGTTTTCTGACCTaGCGCACAGCGCCAGGCAAA +
Preference number: 5 (lower is better)
Translates to: RTTMFFKPSDVGEIVSISVSFLT*RTAPGK
Trigger: TTTGCCTGGCGCTGTGCGCAAGGTCAGAAAACTTAC...GCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp TCCAGTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACCTCACCCTCAGCCACTaGCGGAGGAGGAAGCGTTTT +
Preference number: 5 (lower is better)
Translates to: SSEHWKVSKPCCLYHLFHLTLSH*RRRKRF
Trigger: AAAACGCTTCCTCCTCCGCAAGTGGCTGAGGGTGAG...GTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CAA 90 bp CCAGTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTCTCACCCTCAGCCACTaGCGGAGGAGGAAGCGTTTT +
Preference number: 5 (lower is better)
Translates to: PVNTGKLVSHAVFTICSTLTLSH*RRRKRF
Trigger: AAAACGCTTCCTCCTCCGCAAGTGGCTGAGGGTGAG...AGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS CCA 90 bp GCATCTTCTCCCCTAATTATAACCCACTGTCACTCATTTCAAATTTaGAAGACACTGCTGCCCTCTATTCACTTAGGGCCCTCCGCAGAG +
Preference number: 5 (lower is better)
Translates to: ASSPLIITHCHSFQI*KTLLPSIHLGPSAE
Trigger: CTCTGCGGAGGGCCCTAAGTGAATAGAGGGCAGCAGTGTCTTCCAAATTTGAAATGAGTGACAGTGGGTTATAATTAGGGGAGAAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525757.1
ENST00000633646.1
CDS-3UTR CAA 90 bp TTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTGTTCAACTCTGGCTTTTCTaGGAATTCTTGCCGCCGCTC +
Preference number: 5 (lower is better)
Translates to: FHGSSYFTLRFGWAALCVQLWLF*EFLPPL
Trigger: GAGCGGCGGCAAGAATTCCAAGAAAAGCCAGAGTTG...AACACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000638157.1
CDS-3UTR CAA 90 bp GACCTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAAACTTGGATGGCATaGGGAATGAGGCGAGCTGTT +
Preference number: 5 (lower is better)
Translates to: DLRVFAGITLAQHFPSKSQTWMA*GMRRAV
Trigger: AACAGCTCGCCTCATTCCCAATGCCATCCAAGTTTG...GCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp ATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCAAGTGCCAGAGCTCCTaGGGACACAGAGGCTTTTCA +
Preference number: 5 (lower is better)
Translates to: IYMVYVHVLHRPLAATLFKCQSS*GHRGFS
Trigger: TGAAAAGCCTCTGTGTCCCAAGGAGCTCTGGCACTT...GAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp TTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTTCTCCCCCATGATGTaGTCAATGGCGAGCTCCTTT +
Preference number: 5 (lower is better)
Translates to: FIWSMYMYCTGLLQPPCSFSPMM*SMASSF
Trigger: AAAGGAGCTCGCCATTGACAACATCATGGGGGAGAA...GGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACCTTGCGCACTTGTCCACGCTGAAGTaGAAGACTTCATTCACGTAC +
Preference number: 5 (lower is better)
Translates to: GQPCVFLGTSSKFSDLAHLSTLK*KTSFTY
Trigger: GTACGTGAATGAAGTCTTCAACTTCAGCGTGGACAA...GTGCGCAAGGTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTGAGCATCACTGAGGATTaGATGATTTCCCTCCATTTT +
Preference number: 5 (lower is better)
Translates to: GLCTCIAQASCSHPVPALSITED*MISLHF
Trigger: AAAATGGAGGGAAATCATCAAATCCTCAGTGATGCT...CAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp CTGTACTTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGGTCTATGTACATGTATaGCACAGGCCTCTTGCAGCC +
Preference number: 5 (lower is better)
Translates to: LYFHGSSYFTLRFGWAALVYVHV*HRPLAA
Trigger: GGCTGCAAGAGGCCTGTGCAATACATGTACATAGAC...CAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAAGTACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp ATATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTCTCTGCTGCTGTTATTaGGTGTGGTCGTGCCGCCTT +
Preference number: 5 (lower is better)
Translates to: IFIWSMYMYCTGLLQPPCLCCCY*VWSCRL
Trigger: AAGGCGGCACGACCACACCAAATAACAGCAGCAGAG...ACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529432.5
CDS-3UTR CAA 90 bp GATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAACTCCCTCCTGTGCAAACACATGCACCTTaGCCAAATCCTTCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: DVKARTYLKDDLAQLPPVQTHAP*PNPSLQ
Trigger: CTGGAGGGAAGGATTTGGCAAAGGTGCATGTGTTTG...CACAGGAGGGAGTTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCGCCAGAACCCCCATaGCCAAGTCTGAGAAACTCA +
Preference number: 5 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVPPEPP*PSLRNS
Trigger: TGAGTTTCTCAGACTTGGCAATGGGGGTTCTGGCGG...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp GCTCAGATGCTTTTTCTATGTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTTTTCTGGGAATAGTTTaGGCTTCTGGCTGTGCCAAG +
Preference number: 5 (lower is better)
Translates to: AQMLFLCANCLRQSSPLAFLGIV*ASGCAK
Trigger: CTTGGCACAGCCAGAAGCCAAAACTATTCCCAGAAA...AGCCAGTGGAGACGACTGTCTGAGACAGTTTGCACATAGAAAAAGCATCTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp TGGGCTGTGGGCATAGGCACTCTTCACAGGGATTACATGAAACTGCATTTCCTCGTCTTTCGCAAGCTATaGACTAAGGGGGAAGAGATT +
Preference number: 5 (lower is better)
Translates to: WAVGIGTLHRDYMKLHFLVFRKL*TKGEEI
Trigger: AATCTCTTCCCCCTTAGTCAATAGCTTGCGAAAGAC...GAGGAAATGCAGTTTCATGTAATCCCTGTGAAGAGTGCCTATGCCCACAGCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp ATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTAGAAGTAGTGATGTTTaGATGCTCCCTTGTAGACAG +
Preference number: 5 (lower is better)
Translates to: MVYVHVLHRPLAATLFLPRSSDV*MLPCRQ
Trigger: CTGTCTACAAGGGAGCATCAAAACATCACTACTTCT...AGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp TGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTTAGAAGTAGTGATGTTTaGATGCTCCCTTGTAGACAG +
Preference number: 5 (lower is better)
Translates to: WSMYMYCTGLLQPPCSCLRSSDV*MLPCRQ
Trigger: CTGTCTACAAGGGAGCATCAAAACATCACTACTTCT...AAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS TCA 90 bp TCACTTAGGGCCCTCCGCAGAGCCTGGTGGCAGTACTGCTTAAGCTaGCATCAAAGTTTCATGAAGCCATTTTATAGGAAATTCAGCACA +
Preference number: 5 (lower is better)
Translates to: SLRALRRAWWQYCLS*HQSFMKPFYRKFST
Trigger: TGTGCTGAATTTCCTATAAAATGGCTTCATGAAACTTTGATGTCAGCTTAAGCAGTACTGCCACCAGGCTCTGCGGAGGGCCCTAAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525757.1
CDS-3UTR CAA 90 bp GATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAACTCCCTCCTGTGAGGTCCCAGGACATATaGGAAAAGATGACGAAGTCC +
Preference number: 5 (lower is better)
Translates to: DVKARTYLKDDLAQLPPVRSQDI*EKMTKS
Trigger: GGACTTCGTCATCTTTTCCAATATGTCCTGGGACCT...CACAGGAGGGAGTTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529750.5
CDS-3UTR CAA 90 bp CACATGCACCTTTGCCAAATCCTTCCCTCCAGTGGCTCAGATGCTTTTTCTATGGCAGTGCAGGAGAGCTaGAATCCTTTCATTAGTACA +
Preference number: 5 (lower is better)
Translates to: HMHLCQILPSSGSDAFSMAVQES*NPFIST
Trigger: TGTACTAATGAAAGGATTCAAGCTCTCCTGCACTGC...CATAGAAAAAGCATCTGAGCCACTGGAGGGAAGGATTTGGCAAAGGTGCATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529750.5
CDS-3UTR CAA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCAACTCTGGCTTTTCTaGGAATTCTTGCCGCCGCTC +
Preference number: 5 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVQLWLF*EFLPPL
Trigger: GAGCGGCGGCAAGAATTCCAAGAAAAGCCAGAGTTG...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
CDS-3UTR CAA 90 bp AGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAAGAACAAACTTGGATGGCATaGGGAATGAGGCGAGCTGTT +
Preference number: 5 (lower is better)
Translates to: RVFAGITLAQHFPSKSQEQTWMA*GMRRAV
Trigger: AACAGCTCGCCTCATTCCCAATGCCATCCAAGTTTG...TTCTTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp TTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCGTCTCTATGCTGCTCTaGGATGAGCTGTCATTCACT +
Preference number: 5 (lower is better)
Translates to: FIWSMYMYCTGLLQPPCSVSMLL*DELSFT
Trigger: AGTGAATGACAGCTCATCCAAGAGCAGCATAGAGAC...GGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GATTTGGCTGGGCAGCCTTGTGTGTTTCTAGGTACTAGCAGTAAGTTTTCTGACGATGTTAGTGTGCTGTaGGTGATGGATTTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: DLAGQPCVFLGTSSKFSDDVSVL*VMDFLG
Trigger: GCCCAAGAAATCCATCACCAACAGCACACTAACATC...GTCAGAAAACTTACTGCTAGTACCTAGAAACACACAAGGCTGCCCAGCCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp ATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCTTCTCCCCCATGATGTaGTCAATGGCGAGCTCCTTT +
Preference number: 5 (lower is better)
Translates to: IYMVYVHVLHRPLAATLFFSPMM*SMASSF
Trigger: AAAGGAGCTCGCCATTGACAACATCATGGGGGAGAA...GAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp TTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTGTTTTCTCCCCCATGATGTaGTCAATGGCGAGCTCCTTT +
Preference number: 5 (lower is better)
Translates to: FHGSSYFTLRFGWAALCVFSPMM*SMASSF
Trigger: AAAGGAGCTCGCCATTGACAACATCATGGGGGAGAA...AACACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTGTGGGGATGTCCTCATaGTCATTGAAGTCCAGTGAA +
Preference number: 5 (lower is better)
Translates to: ERQCSLSLQMLGRSSASAVGMSS*SLKSSE
Trigger: TTCACTGGACTTCAATGACAATGAGGACATCCCCAC...AGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAACTCCCTCCTGTGCTTCTCTTTGGGAGATaGTCTGTGCATCTCAGCCAA +
Preference number: 5 (lower is better)
Translates to: DVKARTYLKDDLAQLPPVLLFGR*SVHLSQ
Trigger: TTGGCTGAGATGCACAGACAATCTCCCAAAGAGAAG...CACAGGAGGGAGTTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp TTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTCTTCTCTTTGGGAGATaGTCTGTGCATCTCAGCCAA +
Preference number: 5 (lower is better)
Translates to: LYGLCTCIAQASCSHPVPLLFGR*SVHLSQ
Trigger: TTGGCTGAGATGCACAGACAATCTCCCAAAGAGAAG...AGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp TTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTGTTTTGCTGGCCTTCTCTTaGGGAGATTGTCTGTGCATC +
Preference number: 5 (lower is better)
Translates to: FHGSSYFTLRFGWAALCVLLAFS*GDCLCI
Trigger: GATGCACAGACAATCTCCCAAAGAGAAGGCCAGCAA...AACACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp AGCTGCCTTGCCTGGAGCAGAGGCCACCCTTTTGCTTCTGCAATGTCTTATTGTAGCATCACTGAGGATTaGATGATTTCCCTCCATTTT +
Preference number: 5 (lower is better)
Translates to: SCLAWSRGHPFASAMSYCSITED*MISLHF
Trigger: AAAATGGAGGGAAATCATCAAATCCTCAGTGATGCT...ACAATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGCTCCAGGCAAGGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp TATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGTTCGCAGGCATAACTTaGGCTCAACATTTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: YMVYVHVLHRPLAATLFLFAGIT*AQHFPS
Trigger: AGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAA...CAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp CTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAATTAGACTGGGCTCCCTaGATGCTTCTGTGTTCCCAA +
Preference number: 5 (lower is better)
Translates to: LRVFAGITLAQHFPSKSQLDWAP*MLLCSQ
Trigger: TTGGGAACACAGAAGCATCAAGGGAGCCCAGTCTAA...TTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp GAACCCTTTTTAAGTCATCCCAAAGGTCCCACCGTGGCACCTTTAATAATTAAACCGCCAGAACCCCCATaGCCAAGTCTGAGAAACTCA +
Preference number: 5 (lower is better)
Translates to: EPFLSHPKGPTVAPLIIKPPEPP*PSLRNS
Trigger: TGAGTTTCTCAGACTTGGCAATGGGGGTTCTGGCGG...TTTAATTATTAAAGGTGCCACGGTGGGACCTTTGGGATGACTTAAAAAGGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp ATATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTGGTCTGCTCTGTCACTaGACTCCCAACAAAGAACCC +
Preference number: 5 (lower is better)
Translates to: IFIWSMYMYCTGLLQPPCGLLCH*TPNKEP
Trigger: GGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGACC...ACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp GACCTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCCCTATGTGCACACATaGTCTAGTGGGTTCAAATCG +
Preference number: 5 (lower is better)
Translates to: DLRVFAGITLAQHFPSKSPYVHT*SSGFKS
Trigger: CGATTTGAACCCACTAGACAATGTGTGCACATAGGG...GCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp GAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCCCTATGTGCACACATaGTCTAGTGGGTTCAAATCG +
Preference number: 5 (lower is better)
Translates to: ERQCSLSLQMLGRSSASAPYVHT*SSGFKS
Trigger: CGATTTGAACCCACTAGACAATGTGTGCACATAGGG...AGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp GACTTGCCCAAGGCCACAGAGCTTAGTCAATGGAAAAGTCAGGACCCAGGCTCAGGGAAGAGATTTTGTTaGGGAATGAATAGAGTTGTT +
Preference number: 5 (lower is better)
Translates to: DLPKATELSQWKSQDPGSGKRFC*GMNRVV
Trigger: AACAACTCTATTCATTCCCAAACAAAATCTCTTCCC...TGAGCCTGGGTCCTGACTTTTCCATTGACTAAGCTCTGTGGCCTTGGGCAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp TATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGGTCTTTCGCAAGCTATaGACTAAGGGGGAAGAGATT +
Preference number: 5 (lower is better)
Translates to: YMVYVHVLHRPLAATLFLVFRKL*TKGEEI
Trigger: AATCTCTTCCCCCTTAGTCAATAGCTTGCGAAAGAC...CAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCTCCTGGCAGAGCAATaGAGAAAGTCCACCCAGTCT +
Preference number: 5 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVLLAEQ*RKSTQS
Trigger: AGACTGGGTGGACTTTCTCAATTGCTCTGCCAGGAG...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTCTTGAGCTCTCTTaGTCCTCCCCATGTCATTCC +
Preference number: 5 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVPLELS*SSPCHS
Trigger: GGAATGACATGGGGAGGACAAAGAGAGCTCAAGAGG...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp TTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTGTTCACAAAGCATTCCTCTaGAGCTCTCTTTGTCCTCCC +
Preference number: 5 (lower is better)
Translates to: FHGSSYFTLRFGWAALCVHKAFL*SSLCPP
Trigger: GGGAGGACAAAGAGAGCTCAAGAGGAATGCTTTGTG...AACACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp CTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAACACAAAGCATTCCTCTaGAGCTCTCTTTGTCCTCCC +
Preference number: 5 (lower is better)
Translates to: LRVFAGITLAQHFPSKSQHKAFL*SSLCPP
Trigger: GGGAGGACAAAGAGAGCTCAAGAGGAATGCTTTGTG...TTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp GATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAACTCCCTCCTGTGGCAGAGGCCACCCTTTaGCTTCTGCAATGTCTTATT +
Preference number: 5 (lower is better)
Translates to: DVKARTYLKDDLAQLPPVAEATL*LLQCLI
Trigger: AATAAGACATTGCAGAAGCAAAAGGGTGGCCTCTGC...CACAGGAGGGAGTTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp GAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTGGGAGCCACAAGCTATaGTTGGCAAAAATGGCTGTT +
Preference number: 5 (lower is better)
Translates to: ERQCSLSLQMLGRSSASAGSHKL*LAKMAV
Trigger: AACAGCCATTTTTGCCAACAATAGCTTGTGGCTCCC...AGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS CCA 90 bp TGGTCAAGGAGCATCACTGAGGATTTGATGATTTCCCTCCATTTTTaGAGCTCAGTATCGTGGTACTTTTGTTGGGACTCTAAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: WSRSITEDLMISLHF*SSVSWYFCWDSKSW
Trigger: CCAGCTCTTAGAGTCCCAACAAAAGTACCACGATACTGAGCTCCAAAAATGGAGGGAAATCATCAAATCCTCAGTGATGCTCCTTGACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000322282.11
ENST00000450171.2
ENST00000456860.6
ENST00000525945.1
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS CCA 90 bp AAAATAAGAATTCAAATCAGAATGAGAGGCACACAGAGCAAGGTGTaGGAGGGCTCCAAAAATGGAGCTTCCTTCAGTCTCAGGGATGCA +
Preference number: 5 (lower is better)
Translates to: KIRIQIRMRGTQSKV*EGSKNGASFSLRDA
Trigger: TGCATCCCTGAGACTGAAGGAAGCTCCATTTTTGGAGCCCTCCCACACCTTGCTCTGTGTGCCTCTCATTCTGATTTGAATTCTTATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS CCA 90 bp TTTATAGGAAATTCAGCACAAGGCAAGATATGCAGAACATCCCCATaGCTAGTTACTCATCCCCTGCCCTTAACCATGAGAAGGGCAGAT +
Preference number: 5 (lower is better)
Translates to: FIGNSAQGKICRTSP*LVTHPLPLTMRRAD
Trigger: ATCTGCCCTTCTCATGGTTAAGGGCAGGGGATGAGTAACTAGCCATGGGGATGTTCTGCATATCTTGCCTTGTGCTGAATTTCCTATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525757.1
CDS-3UTR CAA 90 bp AGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAAGAAGTCTCTATGCTGCTCTaGGATGAGCTGTCATTCACT +
Preference number: 5 (lower is better)
Translates to: RVFAGITLAQHFPSKSQEVSMLL*DELSFT
Trigger: AGTGAATGACAGCTCATCCAAGAGCAGCATAGAGAC...TTCTTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp CTGTACTTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTTGTCCACGCTGAAGTaGAAGACTTCATTCACGTAC +
Preference number: 5 (lower is better)
Translates to: LYFHGSSYFTLRFGWAALLSTLK*KTSFTY
Trigger: GTACGTGAATGAAGTCTTCAACTTCAGCGTGGACAA...CAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAAGTACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp TACTTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTCTTCTCTTTGGGAGATaGTCTGTGCATCTCAGCCAA +
Preference number: 5 (lower is better)
Translates to: YFHGSSYFTLRFGWAALCLLFGR*SVHLSQ
Trigger: TTGGCTGAGATGCACAGACAATCTCCCAAAGAGAAG...ACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp AACCCCCAAGATGATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAATTGCTGGCCTTCTCTTaGGGAGATTGTCTGTGCATC +
Preference number: 5 (lower is better)
Translates to: NPQDDVKARTYLKDDLAQLLAFS*GDCLCI
Trigger: GATGCACAGACAATCTCCCAAAGAGAAGGCCAGCAA...TTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATCATCTTGGGGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTTTGCTGGCCTTCTCTTaGGGAGATTGTCTGTGCATC +
Preference number: 5 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVLLAFS*GDCLCI
Trigger: GATGCACAGACAATCTCCCAAAGAGAAGGCCAGCAA...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp ATATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTTGCTGGCCTTCTCTTaGGGAGATTGTCTGTGCATC +
Preference number: 5 (lower is better)
Translates to: IFIWSMYMYCTGLLQPPCLLAFS*GDCLCI
Trigger: GATGCACAGACAATCTCCCAAAGAGAAGGCCAGCAA...ACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp ATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCAGCATCACTGAGGATTaGATGATTTCCCTCCATTTT +
Preference number: 5 (lower is better)
Translates to: IWSMYMYCTGLLQPPCSCSITED*MISLHF
Trigger: AAAATGGAGGGAAATCATCAAATCCTCAGTGATGCT...GCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp ATATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTGTCTATGTACATGTATaGCACAGGCCTCTTGCAGCC +
Preference number: 5 (lower is better)
Translates to: IFIWSMYMYCTGLLQPPCVYVHV*HRPLAA
Trigger: GGCTGCAAGAGGCCTGTGCAATACATGTACATAGAC...ACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp GACCTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCTTCGCAGGCATAACTTaGGCTCAACATTTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: DLRVFAGITLAQHFPSKSFAGIT*AQHFPS
Trigger: AGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAA...GCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTTTAGACTGGGCTCCCTaGATGCTTCTGTGTTCCCAA +
Preference number: 5 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVLDWAP*MLLCSQ
Trigger: TTGGGAACACAGAAGCATCAAGGGAGCCCAGTCTAA...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp TTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTCTCCACTGGCTAATGTaGGTTCGTTCAAAGAGCAAA +
Preference number: 5 (lower is better)
Translates to: LYGLCTCIAQASCSHPVPLHWLM*VRSKSK
Trigger: TTTGCTCTTTGAACGAACCAACATTAGCCAGTGGAG...AGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp TACTTCCATGGCTCTAGCTACTTTACATTAAGATTTGGCTGGGCAGCCTTGTGTTTAAGCCTTCAGATGTaGGGGAGATCGTCAGCATCA +
Preference number: 5 (lower is better)
Translates to: YFHGSSYFTLRFGWAALCLSLQM*GRSSAS
Trigger: TGATGCTGACGATCTCCCCAACATCTGAAGGCTTAA...ACACAAGGCTGCCCAGCCAAATCTTAATGTAAAGTAGCTAGAGCCATGGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp ACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCCGCAAAAATGGCTGTTTaGACTATGCAATCTCAGCAC +
Preference number: 5 (lower is better)
Translates to: TTMFFKPSDVGEIVSISSAKMAV*TMQSQH
Trigger: GTGCTGAGATTGCATAGTCAAAACAGCCATTTTTGC...GGAGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529750.5
ENST00000638157.1
ENST00000646146.1
CDS-3UTR CAA 90 bp CACATGCACCTTTGCCAAATCCTTCCCTCCAGTGGCTCAGATGCTTTTTCTATGGCAAAAATGGCTGTTTaGACTATGCAATCTCAGCAC +
Preference number: 5 (lower is better)
Translates to: HMHLCQILPSSGSDAFSMAKMAV*TMQSQH
Trigger: GTGCTGAGATTGCATAGTCAAAACAGCCATTTTTGC...CATAGAAAAAGCATCTGAGCCACTGGAGGGAAGGATTTGGCAAAGGTGCATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp AGTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCACTTCCAAACTCTCAGCGGTTaGCGTTCAGCAGACCAGGTT +
Preference number: 5 (lower is better)
Translates to: SEHWKVSKPCCLYHLFHFQTLSG*RSADQV
Trigger: AACCTGGTCTGCTGAACGCAAACCGCTGAGAGTTTG...GAAGTGGAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS TCA 90 bp GTCCATATACAGAAGATTGCCAGCCAGGGAATTTCACCTGTAATCTaGATTTTCCAGCTGCTACAGGAGGATGCAAATGAGGATACAGGA +
Preference number: 5 (lower is better)
Translates to: VHIQKIASQGISPVI*IFQLLQEDANEDTG
Trigger: TCCTGTATCCTCATTTGCATCCTCCTGTAGCAGCTGGAAAATTCAGATTACAGGTGAAATTCCCTGGCTGGCAATCTTCTGTATATGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS CCA 90 bp TTTGAATGGCAATCTGTACACAGAAAACAGATGAGAGGCAAGCTTTaGGTGAGCCAGGTGTCCAGTGAGAAGGTAGCAGAACAAATTTAC +
Preference number: 5 (lower is better)
Translates to: FEWQSVHRKQMRGKL*VSQVSSEKVAEQIY
Trigger: GTAAATTTGTTCTGCTACCTTCTCACTGGACACCTGGCTCACCCAAAGCTTGCCTCTCATCTGTTTTCTGTGTACAGATTGCCATTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525757.1
CDS-3UTR CAA 90 bp ATATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTGATGTTAGTGTGCTGTaGGTGATGGATTTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: IFIWSMYMYCTGLLQPPCDVSVL*VMDFLG
Trigger: GCCCAAGAAATCCATCACCAACAGCACACTAACATC...ACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp CTTAGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAATTGTCCACGCTGAAGTaGAAGACTTCATTCACGTAC +
Preference number: 5 (lower is better)
Translates to: LRVFAGITLAQHFPSKSQLSTLK*KTSFTY
Trigger: GTACGTGAATGAAGTCTTCAACTTCAGCGTGGACAA...TTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp ATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCTTGTCCACGCTGAAGTaGAAGACTTCATTCACGTAC +
Preference number: 5 (lower is better)
Translates to: IYMVYVHVLHRPLAATLFLSTLK*KTSFTY
Trigger: GTACGTGAATGAAGTCTTCAACTTCAGCGTGGACAA...GAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp ATATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTCTTCTCTTTGGGAGATaGTCTGTGCATCTCAGCCAA +
Preference number: 5 (lower is better)
Translates to: IFIWSMYMYCTGLLQPPCLLFGR*SVHLSQ
Trigger: TTGGCTGAGATGCACAGACAATCTCCCAAAGAGAAG...ACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp TATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTTTTCTGGGAATAGTTTaGGCTTCTGGCTGTGCCAAG +
Preference number: 5 (lower is better)
Translates to: YLYGLCTCIAQASCSHPVFLGIV*ASGCAK
Trigger: CTTGGCACAGCCAGAAGCCAAAACTATTCCCAGAAA...AACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp TGTCTTATTGTATTGAGAGAAGCAAGGAGGGCTGAAGAACGACAATGTTCTTTAGGTCTGCTCTGTCACTaGACTCCCAACAAAGAACCC +
Preference number: 5 (lower is better)
Translates to: CLIVLREARRAEERQCSLGLLCH*TPNKEP
Trigger: GGGTTCTTTGTTGGGAGTCAAGTGACAGAGCAGACC...TAAAGAACATTGTCGTTCTTCAGCCCTCCTTGCTTCTCTCAATACAATAAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp AGAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCAGAAGTAGTGATGTTTaGATGCTCCCTTGTAGACAG +
Preference number: 5 (lower is better)
Translates to: RTTMFFKPSDVGEIVSISRSSDV*MLPCRQ
Trigger: CTGTCTACAAGGGAGCATCAAAACATCACTACTTCT...GCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp ATATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTTAAGCCTTCAGATGTaGGGGAGATCGTCAGCATCA +
Preference number: 5 (lower is better)
Translates to: IFIWSMYMYCTGLLQPPCLSLQM*GRSSAS
Trigger: TGATGCTGACGATCTCCCCAACATCTGAAGGCTTAA...ACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp TATTCCAGTGAACACTGGAAAGTTAGTAAGCCATGCTGTCTTTACCATTTGTTCCAAACTCTCAGCGGTTaGCGTTCAGCAGACCAGGTT +
Preference number: 5 (lower is better)
Translates to: YSSEHWKVSKPCCLYHLFQTLSG*RSADQV
Trigger: AACCTGGTCTGCTGAACGCAAACCGCTGAGAGTTTG...GAACAAATGGTAAAGACAGCATGGCTTACTAACTTTCCAGTGTTCACTGGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000640939.1
CDS-3UTR CAA 90 bp TTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTAGCATCACTGAGGATTaGATGATTTCCCTCCATTTT +
Preference number: 5 (lower is better)
Translates to: LYGLCTCIAQASCSHPVPSITED*MISLHF
Trigger: AAAATGGAGGGAAATCATCAAATCCTCAGTGATGCT...AGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450171.2
ENST00000529432.5
ENST00000529750.5
ENST00000638086.1
ENST00000646146.1
CDS-3UTR CAA 90 bp TTCTATGTGCAAACTGTCTCAGACAGTCGTCTCCACTGGCTAATGTTGGTTCGTAGCATCACTGAGGATTaGATGATTTCCCTCCATTTT +
Preference number: 5 (lower is better)
Translates to: FYVQTVSDSRLHWLMLVRSITED*MISLHF
Trigger: AAAATGGAGGGAAATCATCAAATCCTCAGTGATGCT...ACGAACCAACATTAGCCAGTGGAGACGACTGTCTGAGACAGTTTGCACATAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp TTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCCCAAAGAATGGGGTTTaGAGAGTCTGTAAGTTAACT +
Preference number: 5 (lower is better)
Translates to: FIWSMYMYCTGLLQPPCSPKNGV*RVCKLT
Trigger: AGTTAACTTACAGACTCTCAAAACCCCATTCTTTGG...GGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS-3UTR CAA 90 bp ACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCTCCAGGAATCTACAAGTTTaGCATTCAAAACTTTCTGGG +
Preference number: 5 (lower is better)
Translates to: TTMFFKPSDVGEIVSISSRNLQV*HSKLSG
Trigger: CCCAGAAAGTTTTGAATGCAAAACTTGTAGATTCCT...GGAGCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS TCA 90 bp AGAAACACTTTTCCAAACTCATGGCTAGGAAGGCCATTGTGTCTGTaGTTGTCTGAATATTCTGTTAACTCCGCTGTGTATTACGGTGTG +
Preference number: 5 (lower is better)
Translates to: RNTFPNSWLGRPLCL*LSEYSVNSAVYYGV
Trigger: CACACCGTAATACACAGCGGAGTTAACAGAATATTCAGACAATCACAGACACAATGGCCTTCCTAGCCATGAGTTTGGAAAAGTGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525757.1
CDS-3UTR CAA 90 bp TTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTTGGGAATGTACGATTaGCTTTTACACTTTCAAACC +
Preference number: 5 (lower is better)
Translates to: FIWSMYMYCTGLLQPPCSLGMYD*LLHFQT
Trigger: GGTTTGAAAGTGTAAAAGCAAATCGTACATTCCCAA...GGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS-3UTR CAA 90 bp AGGGTCTTCGCAGGCATAACTTTGGCTCAACATTTCCCTTCTAAAAGCCAAGAAGCATGGTTTATGACTTaGCTTTCGGTCTCTTTCTTT +
Preference number: 5 (lower is better)
Translates to: RVFAGITLAQHFPSKSQEAWFMT*LSVSFF
Trigger: AAAGAAAGAGACCGAAAGCAAAGTCATAAACCATGC...TTCTTGGCTTTTAGAAGGGAAATGTTGAGCCAAAGTTATGCCTGCGAAGACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS-3UTR CAA 90 bp AGAACGACAATGTTCTTTAAGCCTTCAGATGTTGGGGAGATCGTCAGCATCAGCGGGAAGAGATTTTGTTaGGGAATGAATAGAGTTGTT +
Preference number: 5 (lower is better)
Translates to: RTTMFFKPSDVGEIVSISGKRFC*GMNRVV
Trigger: AACAACTCTATTCATTCCCAAACAAAATCTCTTCCC...GCTGATGCTGACGATCTCCCCAACATCTGAAGGCTTAAAGAACATTGTCGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529750.5
ENST00000646146.1
CDS TCA 90 bp AAGATGACGAAGTCCCAAAAGAACAGAATCCCATGTAATGTGACTTaGACACAGAAAGAGAAAGAGAGAAAGGGAGAAAGAGCCAGAAGA +
Preference number: 5 (lower is better)
Translates to: KMTKSQKNRIPCNVT*TQKEKERKGERARR
Trigger: TCTTCTGGCTCTTTCTCCCTTTCTCTCTTTCTCTTTCTGTGTTCAAGTCACATTACATGGGATTCTGTTCTTTTGGGACTTCGTCATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322282.11
ENST00000456860.6
ENST00000529750.5
CDS TCA 90 bp GTAATTGAACAGATTTGGAGAAGGAATTCCAGGGAAAGTGATCAATaGCTCAGTTGCTCCGCACAAGAACACAAATCCATTAAGAGACAG +
Preference number: 5 (lower is better)
Translates to: VIEQIWRRNSRESDQ*LSCSAQEHKSIKRQ
Trigger: CTGTCTCTTAATGGATTTGTGTTCTTGTGCGGAGCAACTGAGTCATTGATCACTTTCCCTGGAATTCCTTCTCCAAATCTGTTCAATTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640939.1
CDS GCA 90 bp TCTGGGGTTGTTCAACATTGCAAGGAACCATATGTTCCCAATATCTaGACCCTCATGTATACAATTTGGGGCATACACGTCTTAAATAGA +
Preference number: 5 (lower is better)
Translates to: SGVVQHCKEPYVPNI*TLMYTIWGIHVLNR
Trigger: TCTATTTAAGACGTGTATGCCCCAAATTGTATACATGAGGGTGCAGATATTGGGAACATATGGTTCCTTGCAATGTTGAACAACCCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525945.1
CDS-3UTR CAA 90 bp AACCCCCAAGATGATGTCAAAGCTAGAACCTACCTTAAAGATGATCTAGCCCAAAGGAATCTACAAGTTTaGCATTCAAAACTTTCTGGG +
Preference number: 5 (lower is better)
Translates to: NPQDDVKARTYLKDDLAQRNLQV*HSKLSG
Trigger: CCCAGAAAGTTTTGAATGCAAAACTTGTAGATTCCT...TTGGGCTAGATCATCTTTAAGGTAGGTTCTAGCTTTGACATCATCTTGGGGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS-3UTR CAA 90 bp ATATTTATATGGTCTATGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTGGGAAGAGATTTTGTTaGGGAATGAATAGAGTTGTT +
Preference number: 5 (lower is better)
Translates to: IFIWSMYMYCTGLLQPPCGKRFC*GMNRVV
Trigger: AACAACTCTATTCATTCCCAAACAAAATCTCTTCCC...ACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS CCA 90 bp AAGGAACCATATGTTCCCAATATCTGCACCCTCATGTATACAATTTaGGGCATACACGTCTTAAATAGATGCATTCACAGGCATTTTACA +
Preference number: 5 (lower is better)
Translates to: KEPYVPNICTLMYTI*GIHVLNRCIHRHFT
Trigger: TGTAAAATGCCTGTGAATGCATCTATTTAAGACGTGTATGCCCCAAATTGTATACATGAGGGTGCAGATATTGGGAACATATGGTTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525945.1
CDS-3UTR CAA 90 bp GAACCCTTTTTAAGTCATCCCAAAGGTCCCACCGTGGCACCTTTAATAATTAAAAGGAATCTACAAGTTTaGCATTCAAAACTTTCTGGG +
Preference number: 5 (lower is better)
Translates to: EPFLSHPKGPTVAPLIIKRNLQV*HSKLSG
Trigger: CCCAGAAAGTTTTGAATGCAAAACTTGTAGATTCCT...TTTAATTATTAAAGGTGCCACGGTGGGACCTTTGGGATGACTTAAAAAGGGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000529750.5
ENST00000646146.1
CDS GCA 72 bp GAACTGGACCAGACCGGGCTGCCCTCGGGCGCACCCTaGGGCTCGGGCACCTGCAGGGCGGGCAGCGGCCGG +
Preference number: 6 (lower is better)
Translates to: ELDQTGLPSGAP*GSGTCRAGSGR
Trigger: CCGGCCGCTGCCCGCCCTGCAGGTGCCCGAGCCGCAGGGTGCGCCCGAGGGCAGCCCGGTCTGGTCCAGTTC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000533341.3
ENST00000635736.2
ENST00000640939.1
CDS TCA 72 bp CCGCCGGCATGGGGGCCGTCGCCTCTGCGCTCCCCCTaGGCCCTCCGCCAGCGGCCTGGTTCGCGTCTCCCT +
Preference number: 6 (lower is better)
Translates to: PPAWGPSPLRSP*ALRQRPGSRLP
Trigger: AGGGAGACGCGAACCAGGCCGCTGGCGGAGGGCTCAGGGGGAGCGCAGAGGCGACGGCCCCCATGCCGGCGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000533341.3
ENST00000635736.2
ENST00000640939.1
CDS CAA 90 bp GGCTCGGGCACCTGCAGGGCGGGCAGCGGCCGGTTCTCCATCATGTaGGCCGCCGGCATGGGGGCCGTCGCCTCTGCGCTCCCCCTGAGC +
Preference number: 6 (lower is better)
Translates to: GSGTCRAGSGRFSIM*AAGMGAVASALPLS
Trigger: GCTCAGGGGGAGCGCAGAGGCGACGGCCCCCATGCCGGCGGCCAACATGATGGAGAACCGGCCGCTGCCCGCCCTGCAGGTGCCCGAGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000533341.3
ENST00000635736.2
ENST00000640939.1
CDS CCA 72 bp CCTGAGGACACCCAAACCCGAGCGGCGGGGTCGTGCTaGAGCCCGGCTCCACGCACTCGCGCTGCGCCCGGG +
Preference number: 6 (lower is better)
Translates to: PEDTQTRAAGSC*SPAPRTRAAPG
Trigger: CCCGGGCGCAGCGCGAGTGCGTGGAGCCGGGCTCCAGCACGACCCCGCCGCTCGGGTTTGGGTGTCCTCAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS GCA 72 bp CCGCCGCTCCGGCCGGACTGGGAGGAGCAGCTGCGCTaGACGCCCTGCTCCGGTGTGGACGGGGACTTGTCC +
Preference number: 6 (lower is better)
Translates to: PPLRPDWEEQLR*TPCSGVDGDLS
Trigger: GGACAAGTCCCCGTCCACACCGGAGCAGGGCGTGCAGCGCAGCTGCTCCTCCCAGTCCGGCCGGAGCGGCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000322282.11
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000534764.1
ENST00000632815.1
ENST00000633087.1
ENST00000633646.1
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
CDS GCA 72 bp GAGCCTGAGGACACCCAAACCCGAGCGGCGGGGTCGTaGTGGAGCCCGGCTCCACGCACTCGCGCTGCGCCC +
Preference number: 6 (lower is better)
Translates to: EPEDTQTRAAGS*WSPAPRTRAAP
Trigger: GGGCGCAGCGCGAGTGCGTGGAGCCGGGCTCCAGCACGACCCCGCCGCTCGGGTTTGGGTGTCCTCAGGCTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS CCA 72 bp CCTGCAGGGCGGGCAGCGGCCGGTTCTCCATCATGTTaGCCGCCGGCATGGGGGCCGTCGCCTCTGCGCTCC +
Preference number: 6 (lower is better)
Translates to: PAGRAAAGSPSC*PPAWGPSPLRS
Trigger: GGAGCGCAGAGGCGACGGCCCCCATGCCGGCGGCCAACATGATGGAGAACCGGCCGCTGCCCGCCCTGCAGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000533341.3
ENST00000635736.2
ENST00000640939.1
CDS GCA 72 bp CATCATGTTGGCCGCCGGCATGGGGGCCGTCGCCTCTaGGCTCCCCCTGAGCCCTCCGCCAGCGGCCTGGTT +
Preference number: 6 (lower is better)
Translates to: HHVGRRHGGRRL*APPEPSASGLV
Trigger: AACCAGGCCGCTGGCGGAGGGCTCAGGGGGAGCGCAGAGGCGACGGCCCCCATGCCGGCGGCCAACATGATG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000533341.3
ENST00000635736.2
ENST00000640939.1
CDS GCA 72 bp GCGCGCGGCGGTCAGCGGCGTCCACGGCACACCAGCTaGTGGCTACTGCTCACCACGTCTCCCCGCGAGCCT +
Preference number: 6 (lower is better)
Translates to: ARGGQRRPRHTS*WLLLTTSPREP
Trigger: AGGCTCGCGGGGAGACGTGGTGAGCAGTAGCCAGCAGCTGGTGTGCCGTGGACGCCGCTGACCGCCGCGCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS CAA 72 bp ACCTGCAGGGCGGGCAGCGGCCGGTTCTCCATCATGTaGGCCGCCGGCATGGGGGCCGTCGCCTCTGCGCTC +
Preference number: 6 (lower is better)
Translates to: TCRAGSGRFSIM*AAGMGAVASAL
Trigger: GAGCGCAGAGGCGACGGCCCCCATGCCGGCGGCCAACATGATGGAGAACCGGCCGCTGCCCGCCCTGCAGGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000533341.3
ENST00000635736.2
ENST00000640939.1
CDS CAA 90 bp TCGCTGGAGGGCGTGATCTCGATGGACGGCAGCTGCAGGAACTCCTaGCCGGGGGCCAAGACGGCGGGCAGGTCCCGGGCCAGCCCGGCC +
Preference number: 6 (lower is better)
Translates to: SLEGVISMDGSCRNS*PGAKTAGRSRASPA
Trigger: GGCCGGGCTGGCCCGGGACCTGCCCGCCGTCTTGGCCCCCGGCAAGGAGTTCCTGCAGCTGCCGTCCATCGAGATCACGCCCTCCAGCGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000533341.3
ENST00000635736.2
ENST00000640939.1
CDS CAA 72 bp GGCGTGATCTCGATGGACGGCAGCTGCAGGAACTCCTaGCCGGGGGCCAAGACGGCGGGCAGGTCCCGGGCC +
Preference number: 6 (lower is better)
Translates to: GVISMDGSCRNS*PGAKTAGRSRA
Trigger: GGCCCGGGACCTGCCCGCCGTCTTGGCCCCCGGCAAGGAGTTCCTGCAGCTGCCGTCCATCGAGATCACGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000533341.3
ENST00000635736.2
ENST00000640939.1
CDS CAA 90 bp CTGAGCCCTTCTCCACCATGGTGTCTCCGTCCTGGTTCTGCGGGGTaGGCGAGCGAGACCGCTTCCGGAGGATGGGCGAGCAGGCCGGCG +
Preference number: 6 (lower is better)
Translates to: LSPSPPWCLRPGSAG*ASETASGGWASRPA
Trigger: CGCCGGCCTGCTCGCCCATCCTCCGGAAGCGGTCTCGCTCGCCAACCCCGCAGAACCAGGACGGAGACACCATGGTGGAGAAGGGCTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000322282.11
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000534764.1
ENST00000632815.1
ENST00000633087.1
ENST00000633646.1
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
CDS GCA 72 bp TCGTCGCTGGAGGGCGTGATCTCGATGGACGGCAGCTaGAGGAACTCCTTGCCGGGGGCCAAGACGGCGGGC +
Preference number: 6 (lower is better)
Translates to: SSLEGVISMDGS*RNSLPGAKTAG
Trigger: GCCCGCCGTCTTGGCCCCCGGCAAGGAGTTCCTGCAGCTGCCGTCCATCGAGATCACGCCCTCCAGCGACGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000533341.3
ENST00000635736.2
ENST00000640939.1
CDS CCA 72 bp TCTGCGGGGTTGGCGAGCGAGACCGCTTCCGGAGGATaGGCGAGCAGGCCGGCGTGCTGCGGTTGGAGTTAC +
Preference number: 6 (lower is better)
Translates to: SAGLASETASGG*ASRPACCGWSY
Trigger: GTAACTCCAACCGCAGCACGCCGGCCTGCTCGCCCATCCTCCGGAAGCGGTCTCGCTCGCCAACCCCGCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000322282.11
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000534764.1
ENST00000632815.1
ENST00000633087.1
ENST00000633646.1
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
CDS CCA 72 bp TGTTGGCTGCTGGATCTGCTGGGAGAGGCACTCATGTaGACACCCGGTTCGGGCGCGCGGCGGTCAGCGGCG +
Preference number: 6 (lower is better)
Translates to: CWLLDLLGEALM*TPGSGARRSAA
Trigger: CGCCGCTGACCGCCGCGCGCCCGAACCGGGTGTCCACATGAGTGCCTCTCCCAGCAGATCCAGCAGCCAACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS CCA 72 bp GGGAGGAGCAGCTGCGCTGCACGCCCTGCTCCGGTGTaGACGGGGACTTGTCCGAGGAGTGATCTGAGCCCT +
Preference number: 6 (lower is better)
Translates to: GRSSCAARPAPV*TGTCPRSDLSP
Trigger: AGGGCTCAGATCACTCCTCGGACAAGTCCCCGTCCACACCGGAGCAGGGCGTGCAGCGCAGCTGCTCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000322282.11
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000534764.1
ENST00000632815.1
ENST00000633087.1
ENST00000633646.1
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
CDS CCA 72 bp CTGCACCATGCTGGGCTCAGGGGAGGGCTGGCCACATaGCAGCTGGGACCTCAAGGGCTGGGGGCTCACTCT +
Preference number: 6 (lower is better)
Translates to: LHHAGLRGGLAT*QLGPQGLGAHS
Trigger: AGAGTGAGCCCCCAGCCCTTGAGGTCCCAGCTGCCATGTGGCCAGCCCTCCCCTGAGCCCAGCATGGTGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS CAA 90 bp CCGGCCTCCAGGCTCTGCTCCTGTACGTTCTTCATGCGGCGCATCTaGAAGCGCCGGCGGCGAAGCGTGGGGGTCGACGAACTGGACCAG +
Preference number: 6 (lower is better)
Translates to: PASRLCSCTFFMRRI*KRRRRSVGVDELDQ
Trigger: CTGGTCCAGTTCGTCGACCCCCACGCTTCGCCGCCGGCGCTTCAAGATGCGCCGCATGAAGAACGTACAGGAGCAGAGCCTGGAGGCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000533341.3
ENST00000635736.2
ENST00000640939.1
CDS GCA 72 bp GAGACCGCTTCCGGAGGATGGGCGAGCAGGCCGGCGTaGTGCGGTTGGAGTTACTGGCAGTGCAGGAGAGCT +
Preference number: 6 (lower is better)
Translates to: ETASGGWASRPA*CGWSYWQCRRA
Trigger: AGCTCTCCTGCACTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGCCCATCCTCCGGAAGCGGTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322282.11
ENST00000456860.6
ENST00000529750.5
CDS GCA 72 bp GAGACCGCTTCCGGAGGATGGGCGAGCAGGCCGGCGTaGTGCGGTTGGAGTTACTGGCAGTGCTCCATGACC +
Preference number: 6 (lower is better)
Translates to: ETASGGWASRPA*CGWSYWQCSMT
Trigger: GGTCATGGAGCACTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGCCCATCCTCCGGAAGCGGTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529432.5
ENST00000532581.5
CDS GCA 72 bp GAGACCGCTTCCGGAGGATGGGCGAGCAGGCCGGCGTaGTGCGGTTGGAGTTACTGGCAGTGCTGGAAGCCA +
Preference number: 6 (lower is better)
Translates to: ETASGGWASRPA*CGWSYWQCWKP
Trigger: TGGCTTCCAGCACTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGCCCATCCTCCGGAAGCGGTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534764.1
CDS GCA 72 bp TTTCTTCCGCTGCGCTTCCTCGCTTGCTGGCGTCTTTaGCTTAGCGGGACTCGGCAGCCAGGGGCCCCAGGG +
Preference number: 6 (lower is better)
Translates to: FLPLRFLACWRL*LSGTRQPGAPG
Trigger: CCCTGGGGCCCCTGGCTGCCGAGTCCCGCTAAGGCAAAGACGCCAGCAAGCGAGGAAGCGCAGCGGAAGAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000533341.3
ENST00000635736.2
ENST00000640939.1
CDS GCA 72 bp ACCGCTTCCGGAGGATGGGCGAGCAGGCCGGCGTGCTaGGGTTGGAGTTACTGGCAGTGCTTTCTTCCCGCG +
Preference number: 6 (lower is better)
Translates to: TASGGWASRPAC*GWSYWQCFLPA
Trigger: CGCGGGAAGAAAGCACTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGCCCATCCTCCGGAAGCGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000633087.1
ENST00000633646.1
ENST00000635736.2
ENST00000638157.1
CDS GCA 72 bp GAGACCGCTTCCGGAGGATGGGCGAGCAGGCCGGCGTaGTGCGGTTGGAGTTACTGGCAGTGTTGGCTCGCA +
Preference number: 6 (lower is better)
Translates to: ETASGGWASRPA*CGWSYWQCWLA
Trigger: TGCGAGCCAACACTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGCCCATCCTCCGGAAGCGGTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS GCA 72 bp GTCAGCGGCGTCCACGGCACACCAGCTGCTGGCTACTaGTCACCACGTCTCCCCGCGAGCCTGGCTTTGCAA +
Preference number: 6 (lower is better)
Translates to: VSGVHGTPAAGY*SPRLPASLALQ
Trigger: TTGCAAAGCCAGGCTCGCGGGGAGACGTGGTGAGCAGTAGCCAGCAGCTGGTGTGCCGTGGACGCCGCTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS CCA 72 bp CTCCACCATGGTGTCTCCGTCCTGGTTCTGCGGGGTTaGCGAGCGAGACCGCTTCCGGAGGATGGGCGAGCA +
Preference number: 6 (lower is better)
Translates to: LHHGVSVLVLRG*RARPLPEDGRA
Trigger: TGCTCGCCCATCCTCCGGAAGCGGTCTCGCTCGCCAACCCCGCAGAACCAGGACGGAGACACCATGGTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000322282.11
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000534764.1
ENST00000632815.1
ENST00000633087.1
ENST00000633646.1
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
CDS CCA 72 bp TCCGGAGGATGGGCGAGCAGGCCGGCGTGCTGCGGTTaGAGTTACTGGCAGTGCTTTCTTCCCGCGCTCGAG +
Preference number: 6 (lower is better)
Translates to: SGGWASRPACCG*SYWQCFLPALE
Trigger: CTCGAGCGCGGGAAGAAAGCACTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGCCCATCCTCCGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000633087.1
ENST00000633646.1
ENST00000635736.2
ENST00000638157.1
CDS CAA 72 bp TCTCCACCATGGTGTCTCCGTCCTGGTTCTGCGGGGTaGGCGAGCGAGACCGCTTCCGGAGGATGGGCGAGC +
Preference number: 6 (lower is better)
Translates to: SPPWCLRPGSAG*ASETASGGWAS
Trigger: GCTCGCCCATCCTCCGGAAGCGGTCTCGCTCGCCAACCCCGCAGAACCAGGACGGAGACACCATGGTGGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000322282.11
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000534764.1
ENST00000632815.1
ENST00000633087.1
ENST00000633646.1
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
CDS CAA 72 bp TCACTGCACTCCTTCCGCTCCCTCACCCTCAGCCACTaGCGGAGGAGGAAGCGTTTTCGGCGCGGGGACGCG +
Preference number: 6 (lower is better)
Translates to: SLHSFRSLTLSH*RRRKRFRRGDA
Trigger: CGCGTCCCCGCGCCGAAAACGCTTCCTCCTCCGCAAGTGGCTGAGGGTGAGGGAGCGGAAGGAGTGCAGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000533341.3
ENST00000635736.2
ENST00000640939.1
CDS CAA 90 bp GAGCTGCTTTCACTGCACTCCTTCCGCTCCCTCACCCTCAGCCACTaGCGGAGGAGGAAGCGTTTTCGGCGCGGGGACGCGCTGGGTGTG +
Preference number: 6 (lower is better)
Translates to: ELLSLHSFRSLTLSH*RRRKRFRRGDALGV
Trigger: CACACCCAGCGCGTCCCCGCGCCGAAAACGCTTCCTCCTCCGCAAGTGGCTGAGGGTGAGGGAGCGGAAGGAGTGCAGTGAAAGCAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533341.3
CDS CAA 90 bp CTGCTGCTTTCACTGCACTCCTTCCGCTCCCTCACCCTCAGCCACTaGCGGAGGAGGAAGCGTTTTCGGCGCGGGGACGCGCTGGGTGTG +
Preference number: 6 (lower is better)
Translates to: LLLSLHSFRSLTLSH*RRRKRFRRGDALGV
Trigger: CACACCCAGCGCGTCCCCGCGCCGAAAACGCTTCCTCCTCCGCAAGTGGCTGAGGGTGAGGGAGCGGAAGGAGTGCAGTGAAAGCAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635736.2
CDS CAA 90 bp ACCCTGCTTTCACTGCACTCCTTCCGCTCCCTCACCCTCAGCCACTaGCGGAGGAGGAAGCGTTTTCGGCGCGGGGACGCGCTGGGTGTG +
Preference number: 6 (lower is better)
Translates to: TLLSLHSFRSLTLSH*RRRKRFRRGDALGV
Trigger: CACACCCAGCGCGTCCCCGCGCCGAAAACGCTTCCTCCTCCGCAAGTGGCTGAGGGTGAGGGAGCGGAAGGAGTGCAGTGAAAGCAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640939.1
CDS TCA 72 bp GGCTCTGCTCCTGTACGTTCTTCATGCGGCGCATCTTaGAGCGCCGGCGGCGAAGCGTGGGGGTCGACGAAC +
Preference number: 6 (lower is better)
Translates to: GSAPVRSSCGAS*SAGGEAWGSTN
Trigger: GTTCGTCGACCCCCACGCTTCGCCGCCGGCGCTTCAAGATGCGCCGCATGAAGAACGTACAGGAGCAGAGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000533341.3
ENST00000635736.2
ENST00000640939.1
CDS GCA 72 bp GAGCCCTTCTCCACCATGGTGTCTCCGTCCTGGTTCTaGGGGGTTGGCGAGCGAGACCGCTTCCGGAGGATG +
Preference number: 6 (lower is better)
Translates to: EPFSTMVSPSWF*GVGERDRFRRM
Trigger: CATCCTCCGGAAGCGGTCTCGCTCGCCAACCCCGCAGAACCAGGACGGAGACACCATGGTGGAGAAGGGCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000322282.11
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000534764.1
ENST00000632815.1
ENST00000633087.1
ENST00000633646.1
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
CDS GCA 72 bp ACCGCTTCCGGAGGATGGGCGAGCAGGCCGGCGTGCTaGGGTTGGAGTTACTGGCAGTGCTCCATGACCATC +
Preference number: 6 (lower is better)
Translates to: TASGGWASRPAC*GWSYWQCSMTI
Trigger: GATGGTCATGGAGCACTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGCCCATCCTCCGGAAGCGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529432.5
ENST00000532581.5
CDS GCA 72 bp GGGCTCCCCTCGCGCGCCCGCTTGTTTTTCTTCCGCTaGGCTTCCTCGCTTGCTGGCGTCTTTGCCTTAGCG +
Preference number: 6 (lower is better)
Translates to: GLPSRARLFFFR*ASSLAGVFALA
Trigger: CGCTAAGGCAAAGACGCCAGCAAGCGAGGAAGCGCAGCGGAAGAAAAACAAGCGGGCGCGCGAGGGGAGCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000533341.3
ENST00000635736.2
ENST00000640939.1
CDS GCA 72 bp GAGACCGCTTCCGGAGGATGGGCGAGCAGGCCGGCGTaGTGCGGTTGGAGTTACTGGCAGTGCTTTCTTCCC +
Preference number: 6 (lower is better)
Translates to: ETASGGWASRPA*CGWSYWQCFLP
Trigger: GGGAAGAAAGCACTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGCCCATCCTCCGGAAGCGGTCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000633087.1
ENST00000633646.1
ENST00000635736.2
ENST00000638157.1
CDS GCA 72 bp ACCGCTTCCGGAGGATGGGCGAGCAGGCCGGCGTGCTaGGGTTGGAGTTACTGGCAGTGTTGGCTCGCAGAA +
Preference number: 6 (lower is better)
Translates to: TASGGWASRPAC*GWSYWQCWLAE
Trigger: TTCTGCGAGCCAACACTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGCCCATCCTCCGGAAGCGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS CCA 72 bp TCCGGAGGATGGGCGAGCAGGCCGGCGTGCTGCGGTTaGAGTTACTGGCAGTGTTGGCTCGCAGAAAGGCCA +
Preference number: 6 (lower is better)
Translates to: SGGWASRPACCG*SYWQCWLAERP
Trigger: TGGCCTTTCTGCGAGCCAACACTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGCCCATCCTCCGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS CAA 72 bp TTCCGGAGGATGGGCGAGCAGGCCGGCGTGCTGCGGTaGGAGTTACTGGCAGTGCTTTCTTCCCGCGCTCGA +
Preference number: 6 (lower is better)
Translates to: FRRMGEQAGVLR*ELLAVLSSRAR
Trigger: TCGAGCGCGGGAAGAAAGCACTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGCCCATCCTCCGGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000633087.1
ENST00000633646.1
ENST00000635736.2
ENST00000638157.1
CDS CAA 72 bp GGGGGCTCACTCTGGAGCTGCGTGGACTTGCTGCCCTaGCAGCTACCCCAGCTGTCAACTGTGGGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: GGSLWSCVDLLP*QLPQLSTVGSC
Trigger: GCAGGAGCCCACAGTTGACAGCTGGGGTAGCTGCAAGGGCAGCAAGTCCACGCAGCTCCAGAGTGAGCCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS CAA 72 bp TTCCGGAGGATGGGCGAGCAGGCCGGCGTGCTGCGGTaGGAGTTACTGGCAGTGTTGGCTCGCAGAAAGGCC +
Preference number: 6 (lower is better)
Translates to: FRRMGEQAGVLR*ELLAVLARRKA
Trigger: GGCCTTTCTGCGAGCCAACACTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGCCCATCCTCCGGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS TCA 72 bp AGTTGGACCACGGGGTGTCCTCGTCGCTGGAGGGCGTaGTCTCGATGGACGGCAGCTGCAGGAACTCCTTGC +
Preference number: 6 (lower is better)
Translates to: SWTTGCPRRWRA*SRWTAAAGTPC
Trigger: GCAAGGAGTTCCTGCAGCTGCCGTCCATCGAGATCACGCCCTCCAGCGACGAGGACACCCCGTGGTCCAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000533341.3
ENST00000635736.2
ENST00000640939.1
CDS GCA 72 bp ACCGCTTCCGGAGGATGGGCGAGCAGGCCGGCGTGCTaGGGTTGGAGTTACTGGCAGTGCTGGAAGCCATTA +
Preference number: 6 (lower is better)
Translates to: TASGGWASRPAC*GWSYWQCWKPL
Trigger: TAATGGCTTCCAGCACTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGCCCATCCTCCGGAAGCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534764.1
CDS GCA 72 bp GGGGCTCACTCTGGAGCTGCGTGGACTTGCTGCCCTTaGAGCTACCCCAGCTGTCAACTGTGGGCTCCTGCA +
Preference number: 6 (lower is better)
Translates to: GAHSGAAWTCCP*SYPSCQLWAPA
Trigger: TGCAGGAGCCCACAGTTGACAGCTGGGGTAGCTGCAAGGGCAGCAAGTCCACGCAGCTCCAGAGTGAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS GCA 72 bp GCTACTGCTCACCACGTCTCCCCGCGAGCCTGGCTTTaGAAAGAGGAGAGCCAGTCCCATCTGGAGGAGGGG +
Preference number: 6 (lower is better)
Translates to: ATAHHVSPRAWL*KEESQSHLEEG
Trigger: CCCCTCCTCCAGATGGGACTGGCTCTCCTCTTTGCAAAGCCAGGCTCGCGGGGAGACGTGGTGAGCAGTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS CCA 72 bp GCAGCAGCTTGGACACGCTCTGCAGGTGGAAACCGTTaGGGGTGTCCTCCGGGATATGCCGCGTCTGTGTGG +
Preference number: 6 (lower is better)
Translates to: AAAWTRSAGGNR*GCPPGYAASVW
Trigger: CCACACAGACGCGGCATATCCCGGAGGACACCCCCAACGGTTTCCACCTGCAGAGCGTGTCCAAGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000322282.11
ENST00000450171.2
ENST00000456860.6
ENST00000525945.1
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS CCA 72 bp ATGGGTAATGCTGGCAAGGCTGCGCGAAACAAGCCCTaGAGTTGCCGTCAACAGCCAGGCTGGCCGGCTGCC +
Preference number: 6 (lower is better)
Translates to: MGNAGKAARNKP*SCRQQPGWPAA
Trigger: GGCAGCCGGCCAGCCTGGCTGTTGACGGCAACTCCAGGGCTTGTTTCGCGCAGCCTTGCCAGCATTACCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456860.6
CDS CCA 72 bp TCCGGAGGATGGGCGAGCAGGCCGGCGTGCTGCGGTTaGAGTTACTGGCAGTGCTCCATGACCATCCCAAAG +
Preference number: 6 (lower is better)
Translates to: SGGWASRPACCG*SYWQCSMTIPK
Trigger: CTTTGGGATGGTCATGGAGCACTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGCCCATCCTCCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529432.5
ENST00000532581.5
CDS CCA 72 bp TCCGGAGGATGGGCGAGCAGGCCGGCGTGCTGCGGTTaGAGTTACTGGCAGTGCTGGAAGCCATTAGGTAGG +
Preference number: 6 (lower is better)
Translates to: SGGWASRPACCG*SYWQCWKPLGR
Trigger: CCTACCTAATGGCTTCCAGCACTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGCCCATCCTCCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534764.1
CDS CCA 72 bp GGACCTCAAGGGCTGGGGGCTCACTCTGGAGCTGCGTaGACTTGCTGCCCTTGCAGCTACCCCAGCTGTCAA +
Preference number: 6 (lower is better)
Translates to: GPQGLGAHSGAA*TCCPCSYPSCQ
Trigger: TTGACAGCTGGGGTAGCTGCAAGGGCAGCAAGTCCACGCAGCTCCAGAGTGAGCCCCCAGCCCTTGAGGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS CCA 72 bp GTGGTTCTCAGGACAAGCTGGCCAGCCAGTCTCCCATaGCGGGCTCTGCTTTCTTCTCGGCTGGTCCACGGG +
Preference number: 6 (lower is better)
Translates to: VVLRTSWPASLP*RALLSSRLVHG
Trigger: CCCGTGGACCAGCCGAGAAGAAAGCAGAGCCCGCCATGGGAGACTGGCTGGCCAGCTTGTCCTGAGAACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646146.1
CDS CAA 72 bp AGGCTCTGCTCCTGTACGTTCTTCATGCGGCGCATCTaGAAGCGCCGGCGGCGAAGCGTGGGGGTCGACGAA +
Preference number: 6 (lower is better)
Translates to: RLCSCTFFMRRI*KRRRRSVGVDE
Trigger: TTCGTCGACCCCCACGCTTCGCCGCCGGCGCTTCAAGATGCGCCGCATGAAGAACGTACAGGAGCAGAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000533341.3
ENST00000635736.2
ENST00000640939.1
CDS GCA 72 bp CGCCCGCTTGTTTTTCTTCCGCTGCGCTTCCTCGCTTaGTGGCGTCTTTGCCTTAGCGGGACTCGGCAGCCA +
Preference number: 6 (lower is better)
Translates to: RPLVFLPLRFLA*WRLCLSGTRQP
Trigger: TGGCTGCCGAGTCCCGCTAAGGCAAAGACGCCAGCAAGCGAGGAAGCGCAGCGGAAGAAAAACAAGCGGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000533341.3
ENST00000635736.2
ENST00000640939.1
CDS GCA 72 bp CAACGGTGTTCAGCGGCAGCAGGTGCATGGCCAAGCTaGTTCAGGTACCACTGCAGCAGCTGGCTCTCCTGC +
Preference number: 6 (lower is better)
Translates to: QRCSAAAGAWPS*FRYHCSSWLSC
Trigger: GCAGGAGAGCCAGCTGCTGCAGTGGTACCTGAAGCAGCTTGGCCATGCACCTGCTGCCGCTGAACACCGTTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646146.1
CDS CCA 72 bp GCAAACTCTCAGCGGTTTGCGTTCAGCAGACCAGGTTaGGGAGCCGGCTTGGCGCTGCAGGGAGGTAGAGAG +
Preference number: 6 (lower is better)
Translates to: ANSQRFAFSRPG*GAGLALQGGRE
Trigger: CTCTCTACCTCCCTGCAGCGCCAAGCCGGCTCCCCAACCTGGTCTGCTGAACGCAAACCGCTGAGAGTTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533341.3
ENST00000635736.2
CDS CCA 72 bp CCGCTTGTTTTTCTTCCGCTGCGCTTCCTCGCTTGCTaGCGTCTTTGCCTTAGCGGGACTCGGCAGCCAGGG +
Preference number: 6 (lower is better)
Translates to: PLVFLPLRFLAC*RLCLSGTRQPG
Trigger: CCCTGGCTGCCGAGTCCCGCTAAGGCAAAGACGCCAGCAAGCGAGGAAGCGCAGCGGAAGAAAAACAAGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000533341.3
ENST00000635736.2
ENST00000640939.1
CDS CCA 72 bp TGCTCTGCTGACTGCTCTGTTGGCTGCTGGATCTGCTaGGAGAGGCACTCATGTGGACACCCGGTTCGGGCG +
Preference number: 6 (lower is better)
Translates to: CSADCSVGCWIC*ERHSCGHPVRA
Trigger: CGCCCGAACCGGGTGTCCACATGAGTGCCTCTCCCAGCAGATCCAGCAGCCAACAGAGCAGTCAGCAGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS CAA 72 bp TTCCGGAGGATGGGCGAGCAGGCCGGCGTGCTGCGGTaGGAGTTACTGGCAGTGCAGGAGAGCTTGAATCCT +
Preference number: 6 (lower is better)
Translates to: FRRMGEQAGVLR*ELLAVQESLNP
Trigger: AGGATTCAAGCTCTCCTGCACTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGCCCATCCTCCGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322282.11
ENST00000456860.6
ENST00000529750.5
CDS CAA 72 bp AGCAGCAGCTTGGACACGCTCTGCAGGTGGAAACCGTaGGGGGTGTCCTCCGGGATATGCCGCGTCTGTGTG +
Preference number: 6 (lower is better)
Translates to: SSSLDTLCRWKP*GVSSGICRVCV
Trigger: CACACAGACGCGGCATATCCCGGAGGACACCCCCAACGGTTTCCACCTGCAGAGCGTGTCCAAGCTGCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000322282.11
ENST00000450171.2
ENST00000456860.6
ENST00000525945.1
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS CAA 72 bp TTCCGGAGGATGGGCGAGCAGGCCGGCGTGCTGCGGTaGGAGTTACTGGCAGTGCTCCATGACCATCCCAAA +
Preference number: 6 (lower is better)
Translates to: FRRMGEQAGVLR*ELLAVLHDHPK
Trigger: TTTGGGATGGTCATGGAGCACTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGCCCATCCTCCGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529432.5
ENST00000532581.5
CDS CAA 90 bp CTGATAACCAGCAGCAGCTTGGACACGCTCTGCAGGTGGAAACCGTaGGGGGTGTCCTCCGGGATATGCCGCGTCTGTGTGGAACCTGCC +
Preference number: 6 (lower is better)
Translates to: LITSSSLDTLCRWKP*GVSSGICRVCVEPA
Trigger: GGCAGGTTCCACACAGACGCGGCATATCCCGGAGGACACCCCCAACGGTTTCCACCTGCAGAGCGTGTCCAAGCTGCTGCTGGTTATCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000322282.11
ENST00000450171.2
ENST00000456860.6
ENST00000525945.1
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS GCA 72 bp GCAGTGCTGCAAGAGACGGTCTCTGGCTGTAGATTCTaGACCATGCTGGGCTCAGGGGAGGGCTGGCCACAT +
Preference number: 6 (lower is better)
Translates to: AVLQETVSGCRF*TMLGSGEGWPH
Trigger: ATGTGGCCAGCCCTCCCCTGAGCCCAGCATGGTGCAGAATCTACAGCCAGAGACCGTCTCTTGCAGCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS GCA 72 bp GTGGGGCTTAACACGGCTGGGATTTCCTCAGATCCGTaGCAGCAACGGTGTTCAGCGGCAGCAGGTGCATGG +
Preference number: 6 (lower is better)
Translates to: VGLNTAGISSDP*QQRCSAAAGAW
Trigger: CCATGCACCTGCTGCCGCTGAACACCGTTGCTGGCACGGATCTGAGGAAATCCCAGCCGTGTTAAGCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646146.1
CDS CCA 72 bp CGCGTCTGTGTGGAACCTGCCACATGTTTGATCCTGTaGCCCACATCCTCATCTGTGGGCGTGGTGACCGGG +
Preference number: 6 (lower is better)
Translates to: RVCVEPATCLIL*PTSSSVGVVTG
Trigger: CCCGGTCACCACGCCCACAGATGAGGATGTGGGCCACAGGATCAAACATGTGGCAGGTTCCACACAGACGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000322282.11
ENST00000450171.2
ENST00000456860.6
ENST00000525945.1
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS CCA 72 bp CTGATAACCAGCAGCAGCTTGGACACGCTCTGCAGGTaGAAACCGTTGGGGGTGTCCTCCGGGATATGCCGC +
Preference number: 6 (lower is better)
Translates to: LITSSSLDTLCR*KPLGVSSGICR
Trigger: GCGGCATATCCCGGAGGACACCCCCAACGGTTTCCACCTGCAGAGCGTGTCCAAGCTGCTGCTGGTTATCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000322282.11
ENST00000450171.2
ENST00000456860.6
ENST00000525945.1
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS CCA 72 bp TCCTCAGGGATGCCCATGAGCCTCAGGAGGTACTTGTaGGACCCAGCCCCAGTCAAACCCTTCCTCTGGGGT +
Preference number: 6 (lower is better)
Translates to: SSGMPMSLRRYL*DPAPVKPFLWG
Trigger: ACCCCAGAGGAAGGGTTTGACTGGGGCTGGGTCCCACAAGTACCTCCTGAGGCTCATGGGCATCCCTGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525945.1
CDS CCA 72 bp GTCCCCGCTCCCAAAGACCAGGGCAAGCAGAGAAGGTaGGGCATCTCACCTGGTCAAGGAGCATCACTGAGG +
Preference number: 6 (lower is better)
Translates to: VPAPKDQGKQRR*GISPGQGASLR
Trigger: CCTCAGTGATGCTCCTTGACCAGGTGAGATGCCCCACCTTCTCTGCTTGCCCTGGTCTTTGGGAGCGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532581.5
CDS CAA 72 bp GGATCCTCAGGGATGCCCATGAGCCTCAGGAGGTACTaGTGGGACCCAGCCCCAGTCAAACCCTTCCTCTGG +
Preference number: 6 (lower is better)
Translates to: GSSGMPMSLRRY*WDPAPVKPFLW
Trigger: CCAGAGGAAGGGTTTGACTGGGGCTGGGTCCCACAAGTACCTCCTGAGGCTCATGGGCATCCCTGAGGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525945.1
CDS TCA 72 bp CTGAGTGGACTAGGTGCGGAAGATCCGCCCTCATTGTaGGTGGGCACCATCCATTCTGCTGGGGGCCTGGAA +
Preference number: 6 (lower is better)
Translates to: LSGLGAEDPPSL*VGTIHSAGGLE
Trigger: TTCCAGGCCCCCAGCAGAATGGATGGTGCCCACTCACAATGAGGGCGGATCTTCCGCACCTAGTCCACTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525757.1
CDS GCA 72 bp TGGTCGTGCCGCCTTACAGAAGTCCCTCTCTCTCTCTaGCTGGCTCCCTTTCTCTCTCTCCCTCTGACTCCC +
Preference number: 6 (lower is better)
Translates to: WSCRLTEVPLSL*LAPFLSLPLTP
Trigger: GGGAGTCAGAGGGAGAGAGAGAAAGGGAGCCAGGCAGAGAGAGAGAGGGACTTCTGTAAGGCGGCACGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000532581.5
ENST00000534764.1
CDS CCA 72 bp ACTTGCTGCCCTTGCAGCTACCCCAGCTGTCAACTGTaGGCTCCTGCACATAAGCTCTCCCCTCCGTGTGGT +
Preference number: 6 (lower is better)
Translates to: TCCPCSYPSCQL*APAHKLSPPCG
Trigger: ACCACACGGAGGGGAGAGCTTATGTGCAGGAGCCCACAGTTGACAGCTGGGGTAGCTGCAAGGGCAGCAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS CAA 90 bp CGCAGGTGGGCATGGGGACGCTTCCTCCTCCGCACCGTTGTAGTCTaGCTGGCCTTCTCTTTGGGAGATTGTCTGTGCATCTCAGCCAAA +
Preference number: 6 (lower is better)
Translates to: RRWAWGRFLLRTVVV*LAFSLGDCLCISAK
Trigger: TTTGGCTGAGATGCACAGACAATCTCCCAAAGAGAAGGCCAGCAAGACTACAACGGTGCGGAGGAGGAAGCGTCCCCATGCCCACCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000322282.11
ENST00000450171.2
ENST00000456860.6
ENST00000525945.1
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS TCA 72 bp GGTGTCCTTTCTGCTCCTAGAGCTGCATGCCCAGCATaGAGCTTCACAAGTGAGCCGAGGTGGTCAGCGTGG +
Preference number: 6 (lower is better)
Translates to: GVLSAPRAACPA*SFTSEPRWSAW
Trigger: CCACGCTGACCACCTCGGCTCACTTGTGAAGCTTCATGCTGGGCATGCAGCTCTAGGAGCAGAAAGGACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646146.1
CDS GCA 72 bp TGCAGGTGGAAACCGTTGGGGGTGTCCTCCGGGATATaGCGCGTCTGTGTGGAACCTGCCACATGTTTGATC +
Preference number: 6 (lower is better)
Translates to: CRWKPLGVSSGI*RVCVEPATCLI
Trigger: GATCAAACATGTGGCAGGTTCCACACAGACGCGGCATATCCCGGAGGACACCCCCAACGGTTTCCACCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000322282.11
ENST00000450171.2
ENST00000456860.6
ENST00000525945.1
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS GCA 72 bp CCCACCTCCCTCTGCTGCTGTTATTTGGTGTGGTCGTaGCGCCTTACAGAAGTCCCTCTCTCTCTCTGCCTG +
Preference number: 6 (lower is better)
Translates to: PTSLCCCYLVWS*RLTEVPLSLCL
Trigger: CAGGCAGAGAGAGAGAGGGACTTCTGTAAGGCGGCACGACCACACCAAATAACAGCAGCAGAGGGAGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000532581.5
ENST00000534764.1
CDS CCA 72 bp CCCCTTCTTCCCCCTCTCCCAGCTGAAAGCTGGGCTTaGAGGCAAAGGACAGATTCTGCAAATCCAGCCTGG +
Preference number: 6 (lower is better)
Translates to: PLLPPLPAESWA*RQRTDSANPAW
Trigger: CCAGGCTGGATTTGCAGAATCTGTCCTTTGCCTCCAAGCCCAGCTTTCAGCTGGGAGAGGGGGAAGAAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322282.11
ENST00000456860.6
ENST00000529750.5
CDS CCA 72 bp CTCTCCCCCACCTCCCTCTGCTGCTGTTATTTGGTGTaGTCGTGCCGCCTTACAGAAGTCCCTCTCTCTCTC +
Preference number: 6 (lower is better)
Translates to: LSPTSLCCCYLV*SCRLTEVPLSL
Trigger: GAGAGAGAGAGGGACTTCTGTAAGGCGGCACGACCACACCAAATAACAGCAGCAGAGGGAGGTGGGGGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000532581.5
ENST00000534764.1
CDS CAA 72 bp TTCCGGAGGATGGGCGAGCAGGCCGGCGTGCTGCGGTaGGAGTTACTGGCAGTGCTTGCAATAACATTCAGA +
Preference number: 6 (lower is better)
Translates to: FRRMGEQAGVLR*ELLAVLAITFR
Trigger: TCTGAATGTTATTGCAAGCACTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGCCCATCCTCCGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632815.1
CDS GCA 72 bp TCGGGCCAGGGCTCTCAGAAGCTGGGGGCGCTTCTTTaGTCTGCTGTTTCACACCGCTGTAGCATTTTAAGC +
Preference number: 6 (lower is better)
Translates to: SGQGSQKLGALL*SAVSHRCSILS
Trigger: GCTTAAAATGCTACAGCGGTGTGAAACAGCAGAGCAAAGAAGCGCCCCCAGCTTCTGAGAGCCCTGGCCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529432.5
ENST00000532581.5
ENST00000534764.1
CDS CCA 72 bp AGTCGTCGTCAGGGGGCACGTAGTCCTCGTCATCACTaGTCAGGCCCAATTCGTTCCCATAGCACTGGTGAA +
Preference number: 6 (lower is better)
Translates to: SRRQGARSPRHH*SGPIRSHSTGE
Trigger: TTCACCAGTGCTATGGGAACGAATTGGGCCTGACCAGTGATGACGAGGACTACGTGCCCCCTGACGACGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000322282.11
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000534764.1
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS TCA 72 bp AGGAACCTGCTAGAATCATCATCGTGGCTGCTCTGCTaGCTGCTCTGTTGGCTGCTGGATCTGCTGGGAGAG +
Preference number: 6 (lower is better)
Translates to: RNLLESSSWLLC*LLCWLLDLLGE
Trigger: CTCTCCCAGCAGATCCAGCAGCCAACAGAGCAGTCAGCAGAGCAGCCACGATGATGATTCTAGCAGGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS GCA 72 bp AGAGAAAGAGAGAAAGGGAGAAAGAGCCAGAAGAACTaGTGCCACTGCCCCTTCTTCCCCCTCTCCCAGCTG +
Preference number: 6 (lower is better)
Translates to: REREKGRKSQKN*CHCPFFPLSQL
Trigger: CAGCTGGGAGAGGGGGAAGAAGGGGCAGTGGCAGCAGTTCTTCTGGCTCTTTCTCCCTTTCTCTCTTTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322282.11
ENST00000456860.6
ENST00000529750.5
CDS CCA 72 bp ATGAAAACAACTGGTCTCCCCTGGCTTGACTGTGGATaGGTGGCCTCTGGTTTCTCAGCAGAGGGCCTGTGT +
Preference number: 6 (lower is better)
Translates to: MKTTGLPWLDCG*VASGFSAEGLC
Trigger: ACACAGGCCCTCTGCTGAGAAACCAGAGGCCACCCATCCACAGTCAAGCCAGGGGAGACCAGTTGTTTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646146.1
CDS CAA 72 bp AGGCCAGAGCCCTGCCATATGTATTGCACAGGCCTCTaGCAGCCACCCTGTTCCTGCCTTGTCAATGATAGC +
Preference number: 6 (lower is better)
Translates to: RPEPCHMYCTGL*QPPCSCLVNDS
Trigger: GCTATCATTGACAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATATGGCAGGGCTCTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS TCA 72 bp CCTCACTGCTCCCTGTGGATGTTAGTGTGCTGTTGGTaGTGGATTTCTTGGGCAGCTGTGGACTGGCATCTG +
Preference number: 6 (lower is better)
Translates to: PHCSLWMLVCCW*WISWAAVDWHL
Trigger: CAGATGCCAGTCCACAGCTGCCCAAGAAATCCATCACCAACAGCACACTAACATCCACAGGGAGCAGTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000322282.11
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000534764.1
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS GCA 72 bp TTCCATGGATGGAAGATGATATCAGAGAAGCGCCGCTaGTCCATGAAATCCCGCTGGAAGGGCGAGTTGGTG +
Preference number: 6 (lower is better)
Translates to: FHGWKMISEKRR*SMKSRWKGELV
Trigger: CACCAACTCGCCCTTCCAGCGGGATTTCATGGAGCAGCGGCGCTTCTCTGATATCATCTTCCATCCATGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000322282.11
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000534764.1
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS CCA 72 bp AGGCACACAGAGCAAGGTGTGGGAGGGCTCCAAAAATaGAGCTTCCTTCAGTCTCAGGGATGCAAAGCCCTT +
Preference number: 6 (lower is better)
Translates to: RHTEQGVGGLQK*SFLQSQGCKAL
Trigger: AAGGGCTTTGCATCCCTGAGACTGAAGGAAGCTCCATTTTTGGAGCCCTCCCACACCTTGCTCTGTGTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS CAA 90 bp TCACTGCTCCCTGTGGATGTTAGTGTGCTGTTGGTGATGGATTTCTaGGGCAGCTGTGGACTGGCATCTGGCTTGGTCTCTATGCTGCTC +
Preference number: 6 (lower is better)
Translates to: SLLPVDVSVLLVMDF*GSCGLASGLVSMLL
Trigger: GAGCAGCATAGAGACCAAGCCAGATGCCAGTCCACAGCTGCCCAAGAAATCCATCACCAACAGCACACTAACATCCACAGGGAGCAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000322282.11
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000534764.1
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS CAA 90 bp CCTCCTCCGCACCGTTGTAGTCTTGCTGGCCTTCTCTTTGGGAGATaGTCTGTGCATCTCAGCCAAATAAGTGCTCTCCGTTTTGGCCAG +
Preference number: 6 (lower is better)
Translates to: PPPHRCSLAGLLFGR*SVHLSQISALRFGQ
Trigger: CTGGCCAAAACGGAGAGCACTTATTTGGCTGAGATGCACAGACAATCTCCCAAAGAGAAGGCCAGCAAGACTACAACGGTGCGGAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000322282.11
ENST00000450171.2
ENST00000456860.6
ENST00000525945.1
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS TCA 72 bp GTAACCTTTCTTGGAGCCTTAGACCCTGCCAGGCAGTaGGGGTCTGCGTGGTGTATTCCAACATCCAGAGTT +
Preference number: 6 (lower is better)
Translates to: VTFLGALDPARQ*GSAWCIPTSRV
Trigger: AACTCTGGATGTTGGAATACACCACGCAGACCCTCACTGCCTGGCAGGGTCTAAGGCTCCAAGAAAGGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000322282.11
ENST00000450171.2
ENST00000456860.6
ENST00000525945.1
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS GCA 72 bp AGACGTGGTAGTGACAAGCCTGCTTTACAGCAGTGCTaGAAGAGACGGTCTCTGGCTGTAGATTCTGCACCA +
Preference number: 6 (lower is better)
Translates to: RRGSDKPALQQC*KRRSLAVDSAP
Trigger: TGGTGCAGAATCTACAGCCAGAGACCGTCTCTTGCAGCACTGCTGTAAAGCAGGCTTGTCACTACCACGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS GCA 72 bp AGGAGACGTGGTAGTGACAAGCCTGCTTTACAGCAGTaGTGCAAGAGACGGTCTCTGGCTGTAGATTCTGCA +
Preference number: 6 (lower is better)
Translates to: RRRGSDKPALQQ*CKRRSLAVDSA
Trigger: TGCAGAATCTACAGCCAGAGACCGTCTCTTGCAGCACTGCTGTAAAGCAGGCTTGTCACTACCACGTCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638086.1
CDS CCA 72 bp GTATGGAGAGGACACGGAGCAGGACAGCTGAGCTCGTaGGCATGGTTTATGACTTTGCTTTCGGTCTCTTTC +
Preference number: 6 (lower is better)
Translates to: VWRGHGAGQLSS*AWFMTLLSVSF
Trigger: GAAAGAGACCGAAAGCAAAGTCATAAACCATGCCCACGAGCTCAGCTGTCCTGCTCCGTGTCCTCTCCATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS CCA 72 bp AGACCAGGGCAAGCAGAGAAGGTGGGGCATCTCACCTaGTCAAGGAGCATCACTGAGGATTTGATGATTTCC +
Preference number: 6 (lower is better)
Translates to: RPGQAEKVGHLT*SRSITEDLMIS
Trigger: GGAAATCATCAAATCCTCAGTGATGCTCCTTGACCAGGTGAGATGCCCCACCTTCTCTGCTTGCCCTGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532581.5
CDS CAA 72 bp CCTGTGGATGTTAGTGTGCTGTTGGTGATGGATTTCTaGGGCAGCTGTGGACTGGCATCTGGCTTGGTCTCT +
Preference number: 6 (lower is better)
Translates to: PVDVSVLLVMDF*GSCGLASGLVS
Trigger: AGAGACCAAGCCAGATGCCAGTCCACAGCTGCCCAAGAAATCCATCACCAACAGCACACTAACATCCACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000322282.11
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000534764.1
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS CAA 90 bp TCGTGTGTGTCGGAAGAGTCACTGAGCTCAGTGGGGATGTCCTCATaGTCATTGAAGTCCAGTGAAGGGGAGTTCACAGGAGCGATCATC +
Preference number: 6 (lower is better)
Translates to: SCVSEESLSSVGMSS*SLKSSEGEFTGAII
Trigger: GATGATCGCTCCTGTGAACTCCCCTTCACTGGACTTCAATGACAATGAGGACATCCCCACTGAGCTCAGTGACTCTTCCGACACACACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000322282.11
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000534764.1
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS CAA 90 bp GAGGTACTTGTGGGACCCAGCCCCAGTCAAACCCTTCCTCTGGGGTaGTTCAACATTGCAAGGAACCATATGTTCCCAATATCTGCACCC +
Preference number: 6 (lower is better)
Translates to: EVLVGPSPSQTLPLG*FNIARNHMFPISAP
Trigger: GGGTGCAGATATTGGGAACATATGGTTCCTTGCAATGTTGAACAACCCCAGAGGAAGGGTTTGACTGGGGCTGGGTCCCACAAGTACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525945.1
CDS CAA 90 bp GGACACGGAGCAGGACAGCTGAGCTCGTGGGCATGGTTTATGACTTaGCTTTCGGTCTCTTTCTTTTGCTGGGATGCACACCATTTCCTT +
Preference number: 6 (lower is better)
Translates to: GHGAGQLSSWAWFMT*LSVSFFCWDAHHFL
Trigger: AAGGAAATGGTGTGCATCCCAGCAAAAGAAAGAGACCGAAAGCAAAGTCATAAACCATGCCCACGAGCTCAGCTGTCCTGCTCCGTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS CAA 90 bp ACTCTCTGCAGAACCATTTTCCTATTCTGTATTCTGGGAAGTTGGTaGGGTGGGTTGAGGATCCTCAGGGATGCCCATGAGCCTCAGGAG +
Preference number: 6 (lower is better)
Translates to: TLCRTIFLFCILGSW*GGLRILRDAHEPQE
Trigger: CTCCTGAGGCTCATGGGCATCCCTGAGGATCCTCAACCCACCCAACCAACTTCCCAGAATACAGAATAGGAAAATGGTTCTGCAGAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525945.1
CDS TCA 72 bp AGTTCACAGGAGCGATCATCTCAATCTTCTCCCCCATaGTGTTGTCAATGGCGAGCTCCTTTTCCAGGGACC +
Preference number: 6 (lower is better)
Translates to: SSQERSSQSSPP*CCQWRAPFPGT
Trigger: GGTCCCTGGAAAAGGAGCTCGCCATTGACAACATCATGGGGGAGAAGATTGAGATGATCGCTCCTGTGAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000322282.11
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000534764.1
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS TCA 72 bp TTTTGTTGGGACTCTAAGAGCTGGGCCCATTCTGTCTaGGACTGGGGTAACCTTTCTTGGAGCCTTAGACCC +
Preference number: 6 (lower is better)
Translates to: FCWDSKSWAHSV*DWGNLSWSLRP
Trigger: GGGTCTAAGGCTCCAAGAAAGGTTACCCCAGTCTCAGACAGAATGGGCCCAGCTCTTAGAGTCCCAACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000322282.11
ENST00000450171.2
ENST00000456860.6
ENST00000525945.1
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS GCA 72 bp TGGGCAGCTGTGGACTGGCATCTGGCTTGGTCTCTATaGTGCTCTTGGATGAGCTGTCATTCACTTCATTCT +
Preference number: 6 (lower is better)
Translates to: WAAVDWHLAWSL*CSWMSCHSLHS
Trigger: AGAATGAAGTGAATGACAGCTCATCCAAGAGCAGCATAGAGACCAAGCCAGATGCCAGTCCACAGCTGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000322282.11
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000534764.1
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS CCA 72 bp CGGCTCTGGTTTCCATTCTCCTCCTTTTTCCATGGATaGAAGATGATATCAGAGAAGCGCCGCTGCTCCATG +
Preference number: 6 (lower is better)
Translates to: RLWFPFSSFFHG*KMISEKRRCSM
Trigger: CATGGAGCAGCGGCGCTTCTCTGATATCATCTTCCATCCATGGAAAAAGGAGGAGAATGGAAACCAGAGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000322282.11
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000534764.1
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS CCA 72 bp GTCTGTGCATCTCAGCCAAATAAGTGCTCTCCGTTTTaGCCAGCTCGCTCTCTAAATGGCGGAAGTAGTCCT +
Preference number: 6 (lower is better)
Translates to: VCASQPNKCSPF*PARSLNGGSSP
Trigger: AGGACTACTTCCGCCATTTAGAGAGCGAGCTGGCCAAAACGGAGAGCACTTATTTGGCTGAGATGCACAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000322282.11
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS CCA 72 bp AGAGGACACGGAGCAGGACAGCTGAGCTCGTGGGCATaGTTTATGACTTTGCTTTCGGTCTCTTTCTTTTGC +
Preference number: 6 (lower is better)
Translates to: RGHGAGQLSSWA*FMTLLSVSFFC
Trigger: GCAAAAGAAAGAGACCGAAAGCAAAGTCATAAACCATGCCCACGAGCTCAGCTGTCCTGCTCCGTGTCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS CCA 72 bp TACTTGTGGGACCCAGCCCCAGTCAAACCCTTCCTCTaGGGTTGTTCAACATTGCAAGGAACCATATGTTCC +
Preference number: 6 (lower is better)
Translates to: YLWDPAPVKPFL*GCSTLQGTICS
Trigger: GGAACATATGGTTCCTTGCAATGTTGAACAACCCCAGAGGAAGGGTTTGACTGGGGCTGGGTCCCACAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525945.1
CDS CAA 72 bp ATGGATTTCTTGGGCAGCTGTGGACTGGCATCTGGCTaGGTCTCTATGCTGCTCTTGGATGAGCTGTCATTC +
Preference number: 6 (lower is better)
Translates to: MDFLGSCGLASG*VSMLLLDELSF
Trigger: GAATGACAGCTCATCCAAGAGCAGCATAGAGACCAAGCCAGATGCCAGTCCACAGCTGCCCAAGAAATCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000322282.11
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000534764.1
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS CAA 72 bp GTGGGACCCAGCCCCAGTCAAACCCTTCCTCTGGGGTaGTTCAACATTGCAAGGAACCATATGTTCCCAATA +
Preference number: 6 (lower is better)
Translates to: VGPSPSQTLPLG*FNIARNHMFPI
Trigger: TATTGGGAACATATGGTTCCTTGCAATGTTGAACAACCCCAGAGGAAGGGTTTGACTGGGGCTGGGTCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525945.1
CDS CAA 90 bp CTGTTGGTGATGGATTTCTTGGGCAGCTGTGGACTGGCATCTGGCTaGGTCTCTATGCTGCTCTTGGATGAGCTGTCATTCACTTCATTC +
Preference number: 6 (lower is better)
Translates to: LLVMDFLGSCGLASG*VSMLLLDELSFTSF
Trigger: GAATGAAGTGAATGACAGCTCATCCAAGAGCAGCATAGAGACCAAGCCAGATGCCAGTCCACAGCTGCCCAAGAAATCCATCACCAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000322282.11
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000534764.1
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS CAA 90 bp AGAACCATTTTCCTATTCTGTATTCTGGGAAGTTGGTTGGGTGGGTaGAGGATCCTCAGGGATGCCCATGAGCCTCAGGAGGTACTTGTG +
Preference number: 6 (lower is better)
Translates to: RTIFLFCILGSWLGG*RILRDAHEPQEVLV
Trigger: CACAAGTACCTCCTGAGGCTCATGGGCATCCCTGAGGATCCTCAACCCACCCAACCAACTTCCCAGAATACAGAATAGGAAAATGGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525945.1
CDS TCA 72 bp GACATCCTCCAAGAGCACTTAGGTCTCTGGCTAATATaGGCACAGTCAACAAGGGTATGGAGAGGACACGGA +
Preference number: 6 (lower is better)
Translates to: DILQEHLGLWLI*AQSTRVWRGHG
Trigger: TCCGTGTCCTCTCCATACCCTTGTTGACTGTGCTCATATTAGCCAGAGACCTAAGTGCTCTTGGAGGATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS GCA 72 bp CTTTGGGAGATTGTCTGTGCATCTCAGCCAAATAAGTaGTCTCCGTTTTGGCCAGCTCGCTCTCTAAATGGC +
Preference number: 6 (lower is better)
Translates to: LWEIVCASQPNK*SPFWPARSLNG
Trigger: GCCATTTAGAGAGCGAGCTGGCCAAAACGGAGAGCACTTATTTGGCTGAGATGCACAGACAATCTCCCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000322282.11
ENST00000450171.2
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS GCA 72 bp CTTTGGGAGATTGTCTGTGCATCTCAGCCAAATAAGTaGTCTCCGTTTTGGCCAGCTCGCTCTCTATCAGAG +
Preference number: 6 (lower is better)
Translates to: LWEIVCASQPNK*SPFWPARSLSE
Trigger: CTCTGATAGAGAGCGAGCTGGCCAAAACGGAGAGCACTTATTTGGCTGAGATGCACAGACAATCTCCCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525945.1
CDS CCA 72 bp GGAGCTTCCTTCAGTCTCAGGGATGCAAAGCCCTTCTaGCACATCACTGTGTCCATATACAGAAGATTGCCA +
Preference number: 6 (lower is better)
Translates to: GASFSLRDAKPF*HITVSIYRRLP
Trigger: TGGCAATCTTCTGTATATGGACACAGTGATGTGCCAGAAGGGCTTTGCATCCCTGAGACTGAAGGAAGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS CCA 72 bp GTCTGTGCATCTCAGCCAAATAAGTGCTCTCCGTTTTaGCCAGCTCGCTCTCTATCAGAGACAAAAGGACCA +
Preference number: 6 (lower is better)
Translates to: VCASQPNKCSPF*PARSLSETKGP
Trigger: TGGTCCTTTTGTCTCTGATAGAGAGCGAGCTGGCCAAAACGGAGAGCACTTATTTGGCTGAGATGCACAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525945.1
CDS CAA 72 bp CACCGTTGTAGTCTTGCTGGCCTTCTCTTTGGGAGATaGTCTGTGCATCTCAGCCAAATAAGTGCTCTCCGT +
Preference number: 6 (lower is better)
Translates to: HRCSLAGLLFGR*SVHLSQISALR
Trigger: ACGGAGAGCACTTATTTGGCTGAGATGCACAGACAATCTCCCAAAGAGAAGGCCAGCAAGACTACAACGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000322282.11
ENST00000450171.2
ENST00000456860.6
ENST00000525945.1
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS CAA 72 bp CTGCAGAACCATTTTCCTATTCTGTATTCTGGGAAGTaGGTTGGGTGGGTTGAGGATCCTCAGGGATGCCCA +
Preference number: 6 (lower is better)
Translates to: LQNHFPILYSGK*VGWVEDPQGCP
Trigger: TGGGCATCCCTGAGGATCCTCAACCCACCCAACCAACTTCCCAGAATACAGAATAGGAAAATGGTTCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525945.1
CDS CAA 90 bp GCCATATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTaGTCAATGATAGCGATTCCTCTTTTCTTCACTTTCCGACGTGTA +
Preference number: 6 (lower is better)
Translates to: AICIAQASCSHPVPA*SMIAIPLFFTFRRV
Trigger: TACACGTCGGAAAGTGAAGAAAAGAGGAATCGCTATCATTGACAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638157.1
CDS TCA 72 bp ACTGGCATCTGGCTTGGTCTCTATGCTGCTCTTGGATaGGCTGTCATTCACTTCATTCTCTTCCACAGGGAT +
Preference number: 6 (lower is better)
Translates to: TGIWLGLYAALG*AVIHFILFHRD
Trigger: ATCCCTGTGGAAGAGAATGAAGTGAATGACAGCTCATCCAAGAGCAGCATAGAGACCAAGCCAGATGCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000322282.11
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000534764.1
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS TCA 72 bp CTCAGTGGGGATGTCCTCATTGTCATTGAAGTCCAGTaGAGGGGAGTTCACAGGAGCGATCATCTCAATCTT +
Preference number: 6 (lower is better)
Translates to: LSGDVLIVIEVQ*RGVHRSDHLNL
Trigger: AAGATTGAGATGATCGCTCCTGTGAACTCCCCTTCACTGGACTTCAATGACAATGAGGACATCCCCACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000322282.11
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000534764.1
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS GCA 72 bp TCCTTGGGACACAGAGGCTTTTCAAGGAGAGCATTCTaGCAGAGCCGGAACATCATCATATATGTCCTATCC +
Preference number: 6 (lower is better)
Translates to: SLGHRGFSRRAF*QSRNIIIYVLS
Trigger: GGATAGGACATATATGATGATGTTCCGGCTCTGGCAGAATGCTCTCCTTGAAAAGCCTCTGTGTCCCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000322282.11
ENST00000456860.6
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000534764.1
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS GCA 72 bp ATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTaGCTTGTCAATGATAGCGATTCCTCTTTTCTTCAC +
Preference number: 6 (lower is better)
Translates to: MYCTGLLQPPCS*LVNDSDSSFLH
Trigger: GTGAAGAAAAGAGGAATCGCTATCATTGACAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000525945.1
ENST00000529432.5
ENST00000529750.5
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS CCA 72 bp ATTCAAATCAGAATGAGAGGCACACAGAGCAAGGTGTaGGAGGGCTCCAAAAATGGAGCTTCCTTCAGTCTC +
Preference number: 6 (lower is better)
Translates to: IQIRMRGTQSKV*EGSKNGASFSL
Trigger: GAGACTGAAGGAAGCTCCATTTTTGGAGCCCTCCCACACCTTGCTCTGTGTGCCTCTCATTCTGATTTGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS CCA 72 bp CAATCTGTACACAGAAAACAGATGAGAGGCAAGCTTTaGGTGAGCCAGGTGTCCAGTGAGAAGGTAGCAGAA +
Preference number: 6 (lower is better)
Translates to: QSVHRKQMRGKL*VSQVSSEKVAE
Trigger: TTCTGCTACCTTCTCACTGGACACCTGGCTCACCCAAAGCTTGCCTCTCATCTGTTTTCTGTGTACAGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525757.1
CDS CAA 72 bp ATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTaGTCAATGATAGCGATTCCTCTTTTCTTCACTTTC +
Preference number: 6 (lower is better)
Translates to: IAQASCSHPVPA*SMIAIPLFFTF
Trigger: GAAAGTGAAGAAAAGAGGAATCGCTATCATTGACAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000525945.1
ENST00000529432.5
ENST00000529750.5
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS CAA 72 bp AGAACCATTTTCCTATTCTGTATTCTGGGAAGTTGGTaGGGTGGGTTGAGGATCCTCAGGGATGCCCATGAG +
Preference number: 6 (lower is better)
Translates to: RTIFLFCILGSW*GGLRILRDAHE
Trigger: CTCATGGGCATCCCTGAGGATCCTCAACCCACCCAACCAACTTCCCAGAATACAGAATAGGAAAATGGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525945.1
CDS CAA 72 bp GGGCATCTCACCTGGTCAAGGAGCATCACTGAGGATTaGATGATTTCCCTCCATTTTTGGAGCTCAGTATCG +
Preference number: 6 (lower is better)
Translates to: GHLTWSRSITED*MISLHFWSSVS
Trigger: CGATACTGAGCTCCAAAAATGGAGGGAAATCATCAAATCCTCAGTGATGCTCCTTGACCAGGTGAGATGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532581.5
CDS CAA 90 bp TGTACATGTATTGCACAGGCCTCTTGCAGCCACCCTGTTCCTGCCTaGTCAATGATAGCGATTCCTCTTTTCTTCACTTTCCGACGTGTA +
Preference number: 6 (lower is better)
Translates to: CTCIAQASCSHPVPA*SMIAIPLFFTFRRV
Trigger: TACACGTCGGAAAGTGAAGAAAAGAGGAATCGCTATCATTGACAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000450171.2
ENST00000456860.6
ENST00000525945.1
ENST00000529432.5
ENST00000529750.5
ENST00000635736.2
ENST00000638086.1
ENST00000646146.1
CDS CAA 90 bp GAGAAGGTGGGGCATCTCACCTGGTCAAGGAGCATCACTGAGGATTaGATGATTTCCCTCCATTTTTGGAGCTCAGTATCGTGGTACTTT +
Preference number: 6 (lower is better)
Translates to: EKVGHLTWSRSITED*MISLHFWSSVSWYF
Trigger: AAAGTACCACGATACTGAGCTCCAAAAATGGAGGGAAATCATCAAATCCTCAGTGATGCTCCTTGACCAGGTGAGATGCCCCACCTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532581.5
CDS CAA 90 bp AGCATCTTCTCCCCTAATTATAACCCACTGTCACTCATTTCAAATTaGGAAGACACTGCTGCCCTCTATTCACTTAGGGCCCTCCGCAGA +
Preference number: 6 (lower is better)
Translates to: SIFSPNYNPLSLISN*EDTAALYSLRALRR
Trigger: TCTGCGGAGGGCCCTAAGTGAATAGAGGGCAGCAGTGTCTTCCAAATTTGAAATGAGTGACAGTGGGTTATAATTAGGGGAGAAGATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525757.1
ENST00000633646.1
CDS CAA 90 bp CTCCATGTCTTCTCTGCCAAGCACTTTGACAGCCTTCTGATAAGCTaGTCATACCACACATGGTCACTTTTCAGTAGCATGGAGGCAACA +
Preference number: 6 (lower is better)
Translates to: LHVFSAKHFDSLLIS*SYHTWSLFSSMEAT
Trigger: TGTTGCCTCCATGCTACTGAAAAGTGACCATGTGTGGTATGACAAGCTTATCAGAAGGCTGTCAAAGTGCTTGGCAGAGAAGACATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525757.1
CDS TCA 72 bp AATCTGAATTTTCCAGCTGCTACAGGAGGATGCAAATaGGGATACAGGAGAGCTGCTAAAGCCTCAGTGCTC +
Preference number: 6 (lower is better)
Translates to: NLNFPAATGGCK*GYRRAAKASVL
Trigger: GAGCACTGAGGCTTTAGCAGCTCTCCTGTATCCTCATTTGCATCCTCCTGTAGCAGCTGGAAAATTCAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS CCA 72 bp AATTCAGCACAAGGCAAGATATGCAGAACATCCCCATaGCTAGTTACTCATCCCCTGCCCTTAACCATGAGA +
Preference number: 6 (lower is better)
Translates to: NSAQGKICRTSP*LVTHPLPLTMR
Trigger: TCTCATGGTTAAGGGCAGGGGATGAGTAACTAGCCATGGGGATGTTCTGCATATCTTGCCTTGTGCTGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525757.1
CDS TCA 72 bp TACAGCTCCGGAGGTCCCAGGACATATTGGAAAAGATaGCGAAGTCCCAAAAGAACAGAATCCCATGTAATG +
Preference number: 6 (lower is better)
Translates to: YSSGGPRTYWKR*RSPKRTESHVM
Trigger: CATTACATGGGATTCTGTTCTTTTGGGACTTCGTCATCTTTTCCAATATGTCCTGGGACCTCCGGAGCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322282.11
ENST00000456860.6
ENST00000529750.5
CDS TCA 72 bp CAGAAGATTGCCAGCCAGGGAATTTCACCTGTAATCTaGATTTTCCAGCTGCTACAGGAGGATGCAAATGAG +
Preference number: 6 (lower is better)
Translates to: QKIASQGISPVI*IFQLLQEDANE
Trigger: CTCATTTGCATCCTCCTGTAGCAGCTGGAAAATTCAGATTACAGGTGAAATTCCCTGGCTGGCAATCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS CCA 72 bp TTGATGATTTCCCTCCATTTTTGGAGCTCAGTATCGTaGTACTTTTGTTGGGACTCTAAGAGCTGGGCCCAT +
Preference number: 6 (lower is better)
Translates to: LMISLHFWSSVS*YFCWDSKSWAH
Trigger: ATGGGCCCAGCTCTTAGAGTCCCAACAAAAGTACCACGATACTGAGCTCCAAAAATGGAGGGAAATCATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000322282.11
ENST00000450171.2
ENST00000456860.6
ENST00000525945.1
ENST00000529432.5
ENST00000529750.5
ENST00000532581.5
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS CAA 72 bp TTTATATGGTCTATGTACATGTATTGCACAGGCCTCTaGCAGCCACCCTGTTCCTGCCTTGTCAATGATAGC +
Preference number: 6 (lower is better)
Translates to: FIWSMYMYCTGL*QPPCSCLVNDS
Trigger: GCTATCATTGACAAGGCAGGAACAGGGTGGCTGCAAGAGGCCTGTGCAATACATGTACATAGACCATATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000450171.2
ENST00000525945.1
ENST00000529432.5
ENST00000529750.5
ENST00000635736.2
ENST00000638086.1
ENST00000646146.1
CDS CAA 90 bp TTGATGAGCGAGTCCTTCATCTGGTCAAGGAGCATCACTGAGGATTaGATGATTTCCCTCCATTTTTGGAGCTCAGTATCGTGGTACTTT +
Preference number: 6 (lower is better)
Translates to: LMSESFIWSRSITED*MISLHFWSSVSWYF
Trigger: AAAGTACCACGATACTGAGCTCCAAAAATGGAGGGAAATCATCAAATCCTCAGTGATGCTCCTTGACCAGATGAAGGACTCGCTCATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000322282.11
ENST00000450171.2
ENST00000456860.6
ENST00000525945.1
ENST00000529432.5
ENST00000529750.5
ENST00000635736.2
ENST00000638086.1
ENST00000638157.1
ENST00000646146.1
CDS CCA 72 bp GCTTGTCATACCACACATGGTCACTTTTCAGTAGCATaGAGGCAACAGGTACTGGATAATTCAGGATATCGA +
Preference number: 6 (lower is better)
Translates to: ACHTTHGHFSVA*RQQVLDNSGYR
Trigger: TCGATATCCTGAATTATCCAGTACCTGTTGCCTCCATGCTACTGAAAAGTGACCATGTGTGGTATGACAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525757.1
CDS CAA 72 bp TCCCCTAATTATAACCCACTGTCACTCATTTCAAATTaGGAAGACACTGCTGCCCTCTATTCACTTAGGGCC +
Preference number: 6 (lower is better)
Translates to: SPNYNPLSLISN*EDTAALYSLRA
Trigger: GGCCCTAAGTGAATAGAGGGCAGCAGTGTCTTCCAAATTTGAAATGAGTGACAGTGGGTTATAATTAGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525757.1
ENST00000633646.1
CDS GCA 72 bp CCTTCTGGCACATCACTGTGTCCATATACAGAAGATTaGCAGCCAGGGAATTTCACCTGTAATCTGAATTTT +
Preference number: 6 (lower is better)
Translates to: PSGTSLCPYTED*QPGNFTCNLNF
Trigger: AAAATTCAGATTACAGGTGAAATTCCCTGGCTGGCAATCTTCTGTATATGGACACAGTGATGTGCCAGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS GCA 72 bp GTTCAACATTGCAAGGAACCATATGTTCCCAATATCTaGACCCTCATGTATACAATTTGGGGCATACACGTC +
Preference number: 6 (lower is better)
Translates to: VQHCKEPYVPNI*TLMYTIWGIHV
Trigger: GACGTGTATGCCCCAAATTGTATACATGAGGGTGCAGATATTGGGAACATATGGTTCCTTGCAATGTTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525945.1
CDS GCA 72 bp AATGCAGTGCATGTTCTTTGTCATCTACACAGCCTCTaGTACAACAAGCTCCTAGAAACACTTTTCCAAACT +
Preference number: 6 (lower is better)
Translates to: NAVHVLCHLHSL*YNKLLETLFQT
Trigger: AGTTTGGAAAAGTGTTTCTAGGAGCTTGTTGTAGCAGAGGCTGTGTAGATGACAAAGAACATGCACTGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525757.1
CDS TCA 72 bp TTGAAAATAACCCACCCGTATACACACTCTACATGTTaGGAGATACTTGTTCTTATCACTCAGAATGCTCCC +
Preference number: 6 (lower is better)
Translates to: LKITHPYTHSTC*EILVLITQNAP
Trigger: GGGAGCATTCTGAGTGATAAGAACAAGTATCTCTCAACATGTAGAGTGTGTATACGGGTGGGTTATTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525757.1
CDS CAA 90 bp GACTTGAAATTTGAAAATAACCCACCCGTATACACACTCTACATGTaGAGAGATACTTGTTCTTATCACTCAGAATGCTCCCATTCTCCT +
Preference number: 6 (lower is better)
Translates to: DLKFENNPPVYTLYM*RDTCSYHSECSHSP
Trigger: AGGAGAATGGGAGCATTCTGAGTGATAAGAACAAGTATCTCTCAACATGTAGAGTGTGTATACGGGTGGGTTATTTTCAAATTTCAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525757.1
CDS CAA 72 bp ACTTCTGGAAGTTGCCTAAACCCAAAGAATGGGGTTTaGAGAGTCTGTAAGTTAACTCTAATCGACAACAAA +
Preference number: 6 (lower is better)
Translates to: TSGSCLNPKNGV*RVCKLTLIDNK
Trigger: TTTGTTGTCGATTAGAGTTAACTTACAGACTCTCAAAACCCCATTCTTTGGGTTTAGGCAACTTCCAGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS CAA 72 bp TTTGAAAATAACCCACCCGTATACACACTCTACATGTaGAGAGATACTTGTTCTTATCACTCAGAATGCTCC +
Preference number: 6 (lower is better)
Translates to: FENNPPVYTLYM*RDTCSYHSECS
Trigger: GGAGCATTCTGAGTGATAAGAACAAGTATCTCTCAACATGTAGAGTGTGTATACGGGTGGGTTATTTTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525757.1
CDS CAA 90 bp CCATTTCCTTTAGCTGACACTACCCATTCCTTCTTTACAAAGTGTTaGGGAATGTACGATTTGCTTTTACACTTTCAAACCTCCCTAATT +
Preference number: 6 (lower is better)
Translates to: PFPLADTTHSFFTKC*GMYDLLLHFQTSLI
Trigger: AATTAGGGAGGTTTGAAAGTGTAAAAGCAAATCGTACATTCCCAAACACTTTGTAAAGAAGGAATGGGTAGTGTCAGCTAAAGGAAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450171.2
CDS CAA 72 bp TTAGCTGACACTACCCATTCCTTCTTTACAAAGTGTTaGGGAATGTACGATTTGCTTTTACACTTTCAAACC +
Preference number: 6 (lower is better)
Translates to: LADTTHSFFTKC*GMYDLLLHFQT
Trigger: GGTTTGAAAGTGTAAAAGCAAATCGTACATTCCCAAACACTTTGTAAAGAAGGAATGGGTAGTGTCAGCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450171.2