RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRAMD1A (Homo sapiens)

Ensembl gene IDs: ENSG00000089351

Ensembl transcript IDs: ENST00000317991.10, ENST00000411896.6, ENST00000424536.2, ENST00000594597.5, ENST00000595596.1, ENST00000598073.5, ENST00000598118.1, ENST00000598362.1, ENST00000598580.1, ENST00000599476.1, ENST00000599564.5, ENST00000600231.5, ENST00000603669.5, ENST00000603907.1, ENST00000680623.1

Found 722 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTGCACAGCCCCTGGTTGGGCCGTCGGGAGGGGCGGGTGGGAGATaGCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGT +
Preference number: 1 (lower is better)
Translates to: SAQPLVGPSGGAGGR*LALTPCQQWPPRLC
Trigger: ACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGCCCCTCCCGACGGCCCAACCAGGGGCTGTGCAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
3UTR CCA 90 bp CACAGCCCCTGGTTGGGCCGTCGGGAGGGGCGGGTGGGAGATGCCTaGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGT +
Preference number: 1 (lower is better)
Translates to: HSPWLGRREGRVGDA*RSHRASSGRRGSVC
Trigger: ACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGCCCCTCCCGACGGCCCAACCAGGGGCTGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
3UTR CCA 90 bp ATGCCCTGCGTCAGCACCTCGGAGTCCACCACACACCCGCCGGCCTaGGGGCCGCGCCGGAACAGCGTCTGTGTCTCCACCACGGAGGCG +
Preference number: 1 (lower is better)
Translates to: MPCVSTSESTTHPPA*GPRRNSVCVSTTEA
Trigger: CGCCTCCGTGGTGGAGACACAGACGCTGTTCCGGCGCGGCCCCCAGGCCGGCGGGTGTGTGGTGGACTCCGAGGTGCTGACGCAGGGCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR TCA 90 bp CTGCCCCATGGTCTGCGTCGCTGCTGGCTCGGGAAAGGTTGGGCGTaGCATGGCCACGGCGCGAACCCACTGGGCTTGGCTCCTGGCTGC +
Preference number: 1 (lower is better)
Translates to: LPHGLRRCWLGKGWA*HGHGANPLGLAPGC
Trigger: GCAGCCAGGAGCCAAGCCCAGTGGGTTCGCGCCGTGGCCATGTCACGCCCAACCTTTCCCGAGCCAGCAGCGACGCAGACCATGGGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR CCA 90 bp CAGAGGCCGGGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTaGTCCCCACGTCTGCACAGCCCCTGGTTGGGCCGTCGGGAGGGG +
Preference number: 1 (lower is better)
Translates to: QRPGQLPGLKCISVP*SPRLHSPWLGRREG
Trigger: CCCCTCCCGACGGCCCAACCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGCCTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
3UTR CCA 90 bp GGAGGGGCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTaGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAACA +
Preference number: 1 (lower is better)
Translates to: GGAGGRCLALTPCQQ*PPRLCVSICPCGGT
Trigger: TGTTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGCCCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
3UTR CCA 90 bp TGGGTGGGCTCTGTGCTCGGGGGTTCAGCCACCGGGGTCACTGTCTaGCTGGAGGAGGCGTCTGGCTGGCTGTCTACCTGCTCCTCCTTG +
Preference number: 1 (lower is better)
Translates to: WVGSVLGGSATGVTV*LEEASGWLSTCSSL
Trigger: CAAGGAGGAGCAGGTAGACAGCCAGCCAGACGCCTCCTCCAGCCAGACAGTGACCCCGGTGGCTGAACCCCCGAGCACAGAGCCCACCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR TCA 90 bp TCTGTGTCTCCACCACGGAGGCGCTCTTGGGGCCCAGTGGGTTGCTaGTGGGGATGGTGTACGTCAGCACCCGGCGCTGGTGGCACTTGC +
Preference number: 1 (lower is better)
Translates to: SVSPPRRRSWGPVGC*WGWCTSAPGAGGTC
Trigger: GCAAGTGCCACCAGCGCCGGGTGCTGACGTACACCATCCCCATCAGCAACCCACTGGGCCCCAAGAGCGCCTCCGTGGTGGAGACACAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR GCA 90 bp GCCCGCAGGATCTGCCTCCACTTGTGCACCTCCACGCTGTGGAATTaGTTCTGCAGCGCCAGGATCTCGGCCCACTCTGTGGCCGTCTGG +
Preference number: 1 (lower is better)
Translates to: ARRICLHLCTSTLWN*FCSARISAHSVAVW
Trigger: CCAGACGGCCACAGAGTGGGCCGAGATCCTGGCGCTGCAGAAGCAATTCCACAGCGTGGAGGTGCACAAGTGGAGGCAGATCCTGCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR CCA 90 bp GGCGAGTCCGAGAAGAGCATCTGCTGGAGCCGCTCAGCGCCCACATaGAAGACAGAGTTGATGAGGAGGCGGCCGGAGAGGTCGGGAAGC +
Preference number: 1 (lower is better)
Translates to: GESEKSICWSRSAPT*KTELMRRRPERSGS
Trigger: GCTTCCCGACCTCTCCGGCCGCCTCCTCATCAACTCTGTCTTCCATGTGGGCGCTGAGCGGCTCCAGCAGATGCTCTTCTCGGACTCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR CCA 90 bp ACGGAGGCCCGCAGGATCTGCCTCCACTTGTGCACCTCCACGCTGTaGAATTGCTTCTGCAGCGCCAGGATCTCGGCCCACTCTGTGGCC +
Preference number: 1 (lower is better)
Translates to: TEARRICLHLCTSTL*NCFCSARISAHSVA
Trigger: GGCCACAGAGTGGGCCGAGATCCTGGCGCTGCAGAAGCAATTCCACAGCGTGGAGGTGCACAAGTGGAGGCAGATCCTGCGGGCCTCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR GCA 90 bp AGGATCTGCCTCCACTTGTGCACCTCCACGCTGTGGAATTGCTTCTaGAGCGCCAGGATCTCGGCCCACTCTGTGGCCGTCTGGGGGAAC +
Preference number: 1 (lower is better)
Translates to: RICLHLCTSTLWNCF*SARISAHSVAVWGN
Trigger: GTTCCCCCAGACGGCCACAGAGTGGGCCGAGATCCTGGCGCTGCAGAAGCAATTCCACAGCGTGGAGGTGCACAAGTGGAGGCAGATCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR GCA 90 bp TCATCCAGGAGCTCCACGGAGGCCCGCAGGATCTGCCTCCACTTGTaGACCTCCACGCTGTGGAATTGCTTCTGCAGCGCCAGGATCTCG +
Preference number: 1 (lower is better)
Translates to: SSRSSTEARRICLHL*TSTLWNCFCSARIS
Trigger: CGAGATCCTGGCGCTGCAGAAGCAATTCCACAGCGTGGAGGTGCACAAGTGGAGGCAGATCCTGCGGGCCTCCGTGGAGCTCCTGGATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR CCA 90 bp GGGCTCAGCGTCACGTCTGTGAACTTGCACTGCTGTAGGAAGCCCTaGAGGAAGGGCGAGTCCGAGAAGAGCATCTGCTGGAGCCGCTCA +
Preference number: 1 (lower is better)
Translates to: GLSVTSVNLHCCRKP*RKGESEKSICWSRS
Trigger: TGAGCGGCTCCAGCAGATGCTCTTCTCGGACTCGCCCTTCCTCCAGGGCTTCCTACAGCAGTGCAAGTTCACAGACGTGACGCTGAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR GCA 90 bp TGCTGTAGGAAGCCCTGGAGGAAGGGCGAGTCCGAGAAGAGCATCTaGTGGAGCCGCTCAGCGCCCACATGGAAGACAGAGTTGATGAGG +
Preference number: 1 (lower is better)
Translates to: CCRKPWRKGESEKSI*WSRSAPTWKTELMR
Trigger: CCTCATCAACTCTGTCTTCCATGTGGGCGCTGAGCGGCTCCAGCAGATGCTCTTCTCGGACTCGCCCTTCCTCCAGGGCTTCCTACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR CCA 90 bp TGTAGGAAGCCCTGGAGGAAGGGCGAGTCCGAGAAGAGCATCTGCTaGAGCCGCTCAGCGCCCACATGGAAGACAGAGTTGATGAGGAGG +
Preference number: 1 (lower is better)
Translates to: CRKPWRKGESEKSIC*SRSAPTWKTELMRR
Trigger: CCTCCTCATCAACTCTGTCTTCCATGTGGGCGCTGAGCGGCTCCAGCAGATGCTCTTCTCGGACTCGCCCTTCCTCCAGGGCTTCCTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR CCA 90 bp GGCCGGGGCTGGGTGTCAAAGGGAGGGTCTGAGACTGTGATGCCTTaGTGCAGCTTCTCCAGCGAGAACTTCATCTCATCCAGGAGCTCC +
Preference number: 1 (lower is better)
Translates to: GRGWVSKGGSETVMP*CSFSSENFISSRSS
Trigger: GGAGCTCCTGGATGAGATGAAGTTCTCGCTGGAGAAGCTGCACCAAGGCATCACAGTCTCAGACCCTCCCTTTGACACCCAGCCCCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR GCA 90 bp GAGAACTTCATCTCATCCAGGAGCTCCACGGAGGCCCGCAGGATCTaGCTCCACTTGTGCACCTCCACGCTGTGGAATTGCTTCTGCAGC +
Preference number: 1 (lower is better)
Translates to: ENFISSRSSTEARRI*LHLCTSTLWNCFCS
Trigger: GCTGCAGAAGCAATTCCACAGCGTGGAGGTGCACAAGTGGAGGCAGATCCTGCGGGCCTCCGTGGAGCTCCTGGATGAGATGAAGTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR TCA 90 bp TGTCATCGGGCCGGGGCTGGGTGTCAAAGGGAGGGTCTGAGACTGTaGTGCCTTGGTGCAGCTTCTCCAGCGAGAACTTCATCTCATCCA +
Preference number: 1 (lower is better)
Translates to: CHRAGAGCQREGLRL*CLGAASPARTSSHP
Trigger: TGGATGAGATGAAGTTCTCGCTGGAGAAGCTGCACCAAGGCATCACAGTCTCAGACCCTCCCTTTGACACCCAGCCCCGGCCCGATGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR TCA 90 bp GGAAAAGCTGTCATCGGGCCGGGGCTGGGTGTCAAAGGGAGGGTCTaGGACTGTGATGCCTTGGTGCAGCTTCTCCAGCGAGAACTTCAT +
Preference number: 1 (lower is better)
Translates to: GKAVIGPGLGVKGRV*DCDALVQLLQRELH
Trigger: ATGAAGTTCTCGCTGGAGAAGCTGCACCAAGGCATCACAGTCTCAGACCCTCCCTTTGACACCCAGCCCCGGCCCGATGACAGCTTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR TCA 90 bp GATGGTGGAAATAGTCTTCAATGCCGCTCCACGAGTTCTTCTCAATaGGCGACTTCACCAGGCTCCACGGCTGCTTTCGGTAGCGGATCT +
Preference number: 1 (lower is better)
Translates to: DGGNSLQCRSTSSSQ*ATSPGSTAAFGSGS
Trigger: AGATCCGCTACCGAAAGCAGCCGTGGAGCCTGGTGAAGTCGCTCATTGAGAAGAACTCGTGGAGCGGCATTGAAGACTATTTCCACCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR-3UTR GCA 90 bp AGGGGCCGCTTCCGCCGCCGCAGGCCGGATAGCAAGCCCCGGGCATCCTTCCCGCTCTGCCCCATGGTCTaGGTCGCTGCTGGCTCGGGA +
Preference number: 2 (lower is better)
Translates to: RGRFRRRRPDSKPRASFPLCPMV*VAAGSG
Trigger: TCCCGAGCCAGCAGCGACGCAGACCATGGGGCAGAG...CGGGAAGGATGCCCGGGGCTTGCTATCCGGCCTGCGGCGGCGGAAGCGGCCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR-3UTR CCA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCTGCACAGCCCCTGGTTaGGCCGTCGGGAGGGGCGGG +
Preference number: 2 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVCTAPG*AVGRGG
Trigger: CCCGCCCCTCCCGACGGCCCAACCAGGGGCTGTGCA...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
3UTR-3UTR GCA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCTGGCGCTCACACCGTaGCAGCAGTGGCCGCCGAGG +
Preference number: 2 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVLALTP*QQWPPR
Trigger: CCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAG...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
3UTR-3UTR GCA 90 bp GGCCGGAGAGGTCGGGAAGCAGGGCAGCCAAGTCCGCTTCCTCCCCAGTGGATGGCTGGGTGGGCTCTGTaGTCGGGGGTTCAGCCACCG +
Preference number: 2 (lower is better)
Translates to: GRRGREAGQPSPLPPQWMAGWAL*SGVQPP
Trigger: CGGTGGCTGAACCCCCGAGCACAGAGCCCACCCAGC...CATCCACTGGGGAGGAAGCGGACTTGGCTGCCCTGCTTCCCGACCTCTCCGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR-3UTR CCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCGTCCATCTGTCCATGTaGGGGAACAGCTGCGTGGCC +
Preference number: 2 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLVHLSM*GNSCVA
Trigger: GGCCACGCAGCTGTTCCCCCACATGGACAGATGGAC...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
3UTR-3UTR CCA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCACGTCTGCACAGCCCCTaGTTGGGCCGTCGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPRLHSP*LGRREG
Trigger: CCCCTCCCGACGGCCCAACCAGGGGCTGTGCAGACG...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
3UTR-3UTR CCA 90 bp TTCCGCCGCCGCAGGCCGGATAGCAAGCCCCGGGCATCCTTCCCGCCTTCCTCCGAGGAGGCGTCTGGCTaGCTGTCTACCTGCTCCTCC +
Preference number: 2 (lower is better)
Translates to: FRRRRPDSKPRASFPPSSEEASG*LSTCSS
Trigger: GGAGGAGCAGGTAGACAGCCAGCCAGACGCCTCCTC...GGAGGAAGGCGGGAAGGATGCCCGGGGCTTGCTATCCGGCCTGCGGCGGCGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR CAA 90 bp TCCTCCTCTGCCCCATGGTCTGCGTCGCTGCTGGCTCGGGAAAGGTaGGGCGTGACATGGCCACGGCGCGAACCCACTGGGCTTGGCTCC +
Preference number: 2 (lower is better)
Translates to: SSSAPWSASLLARER*GVTWPRREPTGLGS
Trigger: GGAGCCAAGCCCAGTGGGTTCGCGCCGTGGCCATGTCACGCCCAACCTTTCCCGAGCCAGCAGCGACGCAGACCATGGGGCAGAGGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR CAA 90 bp GGGCCGCGCCGGAACAGCGTCTGTGTCTCCACCACGGAGGCGCTCTaGGGGCCCAGTGGGTTGCTGATGGGGATGGTGTACGTCAGCACC +
Preference number: 2 (lower is better)
Translates to: GPRRNSVCVSTTEAL*GPSGLLMGMVYVST
Trigger: GGTGCTGACGTACACCATCCCCATCAGCAACCCACTGGGCCCCAAGAGCGCCTCCGTGGTGGAGACACAGACGCTGTTCCGGCGCGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR-3UTR GCA 90 bp GGGTTGCTGATGGGGATGGTGTACGTCAGCACCCGGCGCTGGTGGCACTTGCTGGGGGCGGGTGGGAGATaGCTGGCGCTCACACCGTGC +
Preference number: 2 (lower is better)
Translates to: GLLMGMVYVSTRRWWHLLGAGGR*LALTPC
Trigger: GCACGGTGTGAGCGCCAGGCATCTCCCACCCGCCCC...CAGCAAGTGCCACCAGCGCCGGGTGCTGACGTACACCATCCCCATCAGCAACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR-3UTR GCA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCGTGGTCCCCACGTCTaGACAGCCCCTGGTTGGGCC +
Preference number: 2 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVRGPHV*TAPGWA
Trigger: GGCCCAACCAGGGGCTGTGCAGACGTGGGGACCACG...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
3UTR-3UTR CCA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCACGGGTGGGAGATGCCTaGCGCTCACACCGTGCCAGC +
Preference number: 2 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPRVGDA*RSHRAS
Trigger: GCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCG...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
3UTR-3UTR CCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGTGCACAGCCCCTGGTTaGGCCGTCGGGAGGGGCGGG +
Preference number: 2 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWCTAPG*AVGRGG
Trigger: CCCGCCCCTCCCGACGGCCCAACCAGGGGCTGTGCA...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
3UTR-3UTR CCA 90 bp AGGGGCCGCTTCCGCCGCCGCAGGCCGGATAGCAAGCCCCGGGCATCCTTCCCGTCAATAGCTCCTCACTaGGCAGCAGATCCAAGGGGC +
Preference number: 2 (lower is better)
Translates to: RGRFRRRRPDSKPRASFPSIAPH*AADPRG
Trigger: GCCCCTTGGATCTGCTGCCCAGTGAGGAGCTATTGA...CGGGAAGGATGCCCGGGGCTTGCTATCCGGCCTGCGGCGGCGGAAGCGGCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR CAA 90 bp AGCGTCTGTGTCTCCACCACGGAGGCGCTCTTGGGGCCCAGTGGGTaGCTGATGGGGATGGTGTACGTCAGCACCCGGCGCTGGTGGCAC +
Preference number: 2 (lower is better)
Translates to: SVCVSTTEALLGPSG*LMGMVYVSTRRWWH
Trigger: GTGCCACCAGCGCCGGGTGCTGACGTACACCATCCCCATCAGCAACCCACTGGGCCCCAAGAGCGCCTCCGTGGTGGAGACACAGACGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR-3UTR GCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGGGGGCGGGTGGGAGATaGCTGGCGCTCACACCGTGC +
Preference number: 2 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWGAGGR*LALTPC
Trigger: GCACGGTGTGAGCGCCAGGCATCTCCCACCCGCCCC...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
3UTR-3UTR GCA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACGGGGCGGGTGGGAGATaGCTGGCGCTCACACCGTGC +
Preference number: 2 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHGAGGR*LALTPC
Trigger: GCACGGTGTGAGCGCCAGGCATCTCCCACCCGCCCC...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
3UTR-3UTR CCA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCACACCGTGCCAGCAGTaGCCGCCGAGGCTCTGTGTG +
Preference number: 2 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVTPCQQ*PPRLCV
Trigger: CACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGT...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
3UTR-3UTR CCA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCGGTCTGCGTCGCTGCTaGCTCGGGAAAGGTTGGGCG +
Preference number: 2 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVGLRRC*LGKGWA
Trigger: CGCCCAACCTTTCCCGAGCCAGCAGCGACGCAGACC...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR-3UTR CCA 90 bp AGGGGCCGCTTCCGCCGCCGCAGGCCGGATAGCAAGCCCCGGGCATCCTTCCCGCCGCTTCCTCCCCAGTaGATGAAGAGGAGTTACTTG +
Preference number: 2 (lower is better)
Translates to: RGRFRRRRPDSKPRASFPPLPPQ*MKRSYL
Trigger: CAAGTAACTCCTCTTCATCCACTGGGGAGGAAGCGG...CGGGAAGGATGCCCGGGGCTTGCTATCCGGCCTGCGGCGGCGGAAGCGGCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR-3UTR CCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGCGGGTGGGAGATGCCTaGCGCTCACACCGTGCCAGC +
Preference number: 2 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWRVGDA*RSHRAS
Trigger: GCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCG...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
3UTR-3UTR CCA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCAAGGTTGGGCGTGACATaGCCACGGCGCGAACCCACT +
Preference number: 2 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPRLGVT*PRREPT
Trigger: AGTGGGTTCGCGCCGTGGCCATGTCACGCCCAACCT...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR CAA 90 bp GGCCCGCAGGATCTGCCTCCACTTGTGCACCTCCACGCTGTGGAATaGCTTCTGCAGCGCCAGGATCTCGGCCCACTCTGTGGCCGTCTG +
Preference number: 2 (lower is better)
Translates to: GPQDLPPLVHLHAVE*LLQRQDLGPLCGRL
Trigger: CAGACGGCCACAGAGTGGGCCGAGATCCTGGCGCTGCAGAAGCAATTCCACAGCGTGGAGGTGCACAAGTGGAGGCAGATCCTGCGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR-3UTR CCA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCGTCCATCTGTCCATGTaGGGGAACAGCTGCGTGGCC +
Preference number: 2 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVVHLSM*GNSCVA
Trigger: GGCCACGCAGCTGTTCCCCCACATGGACAGATGGAC...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
3UTR-3UTR CCA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCAGTCCATCTGTCCATGTaGGGGAACAGCTGCGTGGCC +
Preference number: 2 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPVHLSM*GNSCVA
Trigger: GGCCACGCAGCTGTTCCCCCACATGGACAGATGGAC...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
3UTR-3UTR CCA 90 bp CTCTTGGGGCCCAGTGGGTTGCTGATGGGGATGGTGTACGTCAGCACCCGGCGCGCCGGGCCAGCTCCCTaGTCTAAAGTGCATCTCGGT +
Preference number: 2 (lower is better)
Translates to: LLGPSGLLMGMVYVSTRRAGPAP*SKVHLG
Trigger: ACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGC...GCGCCGGGTGCTGACGTACACCATCCCCATCAGCAACCCACTGGGCCCCAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR CAA 90 bp AAGAGCATCTGCTGGAGCCGCTCAGCGCCCACATGGAAGACAGAGTaGATGAGGAGGCGGCCGGAGAGGTCGGGAAGCAGGGCAGCCAAG +
Preference number: 2 (lower is better)
Translates to: KSICWSRSAPTWKTE*MRRRPERSGSRAAK
Trigger: CTTGGCTGCCCTGCTTCCCGACCTCTCCGGCCGCCTCCTCATCAACTCTGTCTTCCATGTGGGCGCTGAGCGGCTCCAGCAGATGCTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR-3UTR TCA 90 bp TCATCTCATCCAGGAGCTCCACGGAGGCCCGCAGGATCTGCCTCCACTTGTGCACGGAGAAGCGGGAGCTaGGGGAGCCCGAGGTGTGAA +
Preference number: 2 (lower is better)
Translates to: SSHPGAPRRPAGSASTCARRSGS*GSPRCE
Trigger: TTCACACCTCGGGCTCCCTCAGCTCCCGCTTCTCCG...TGCACAAGTGGAGGCAGATCCTGCGGGCCTCCGTGGAGCTCCTGGATGAGATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR-3UTR GCA 90 bp TGGAGCCGCTCAGCGCCCACATGGAAGACAGAGTTGATGAGGAGGCGGCCGGAGCATGGTCTGCGTCGCTaGTGGCTCGGGAAAGGTTGG +
Preference number: 2 (lower is better)
Translates to: WSRSAPTWKTELMRRRPEHGLRR*WLGKGW
Trigger: CCAACCTTTCCCGAGCCAGCAGCGACGCAGACCATG...CTCCGGCCGCCTCCTCATCAACTCTGTCTTCCATGTGGGCGCTGAGCGGCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR-3UTR CCA 90 bp AGGCCGGGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTGTCCATCTGTCCATGTaGGGGAACAGCTGCGTGGCC +
Preference number: 2 (lower is better)
Translates to: RPGQLPGLKCISVPWSPRVHLSM*GNSCVA
Trigger: GGCCACGCAGCTGTTCCCCCACATGGACAGATGGAC...ACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
3UTR-3UTR CCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGGGGGGAACAGCTGCGTaGCCGGGGTCCTCAGGAAAA +
Preference number: 2 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWGGTAA*PGSSGK
Trigger: TTTTCCTGAGGACCCCGGCCACGCAGCTGTTCCCCC...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR-3UTR GCA 90 bp TCATCTCATCCAGGAGCTCCACGGAGGCCCGCAGGATCTGCCTCCACTTGTGCAAGTCCTGGTAGGGGATaGCCTGCGTCAGCACCTCGG +
Preference number: 2 (lower is better)
Translates to: SSHPGAPRRPAGSASTCASPGRG*PASAPR
Trigger: CCGAGGTGCTGACGCAGGGCATCCCCTACCAGGACT...TGCACAAGTGGAGGCAGATCCTGCGGGCCTCCGTGGAGCTCCTGGATGAGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR-3UTR CCA 90 bp GTGTCTGTCAATAGCTCCTCACTGGGCAGCAGATCCAAGGGGCCCAGGGTGGTGTCCTCCTCTGCCCCATaGTCTGCGTCGCTGCTGGCT +
Preference number: 2 (lower is better)
Translates to: VSVNSSSLGSRSKGPRVVSSSAP*SASLLA
Trigger: AGCCAGCAGCGACGCAGACCATGGGGCAGAGGAGGA...CACCACCCTGGGCCCCTTGGATCTGCTGCCCAGTGAGGAGCTATTGACAGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR-3UTR CCA 90 bp GAGACAGCTTCTCAGCCTTGGCGAGCTCTCGCTCCAGATGGTGGAAATAGTCTTCCAAGGGGCCCAGGGTaGTGGGCCCGTCAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: ETASQPWRALAPDGGNSLPRGPG*WARQAG
Trigger: CCCAGCCTGACGGGCCCACCACCCTGGGCCCCTTGG...AAGACTATTTCCACCATCTGGAGCGAGAGCTCGCCAAGGCTGAGAAGCTGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR CAA 90 bp ATCTCATCCAGGAGCTCCACGGAGGCCCGCAGGATCTGCCTCCACTaGTGCACCTCCACGCTGTGGAATTGCTTCTGCAGCGCCAGGATC +
Preference number: 2 (lower is better)
Translates to: ISSRSSTEARRICLH*CTSTLWNCFCSARI
Trigger: GATCCTGGCGCTGCAGAAGCAATTCCACAGCGTGGAGGTGCACAAGTGGAGGCAGATCCTGCGGGCCTCCGTGGAGCTCCTGGATGAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR-3UTR GCA 90 bp CAAAGGTGTGGGCTGTCCTTTCCAGGGACCAGAGGCGGTAGAAGAGCAGGACGTGGGCCAGACCCAGGATaGAGTAGCGGTGGGCAGTGT +
Preference number: 2 (lower is better)
Translates to: QRCGLSFPGTRGGRRAGRGPDPG*SSGGQC
Trigger: ACACTGCCCACCGCTACTGCATCCTGGGTCTGGCCC...ACGTCCTGCTCTTCTACCGCCTCTGGTCCCTGGAAAGGACAGCCCACACCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR-3UTR CCA 90 bp TCACCAGGCTCCACGGCTGCTTTCGGTAGCGGATCTCAGAAGACACTCGGAGCCTGCTGTAGGAAGCCCTaGAGGAAGGGCGAGTCCGAG +
Preference number: 2 (lower is better)
Translates to: SPGSTAAFGSGSQKTLGACCRKP*RKGESE
Trigger: CTCGGACTCGCCCTTCCTCCAGGGCTTCCTACAGCA...GGCTCCGAGTGTCTTCTGAGATCCGCTACCGAAAGCAGCCGTGGAGCCTGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR-3UTR CCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGCTTCTGACCCTTTATTaGGGCACTGTCGGCCCCAAA +
Preference number: 2 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWLLTLY*GTVGPK
Trigger: TTTGGGGCCGACAGTGCCCCAATAAAGGGTCAGAAG...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
3UTR-3UTR GCA 90 bp AGACAGCTTCTCAGCCTTGGCGAGCTCTCGCTCCAGATGGTGGAAATAGTCTTCTCCGAGAAGAGCATCTaGTGGAGCCGCTCAGCGCCC +
Preference number: 2 (lower is better)
Translates to: RQLLSLGELSLQMVEIVFSEKSI*WSRSAP
Trigger: GGGCGCTGAGCGGCTCCAGCAGATGCTCTTCTCGGA...GAAGACTATTTCCACCATCTGGAGCGAGAGCTCGCCAAGGCTGAGAAGCTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR GCA 72 bp GGAGGGGCGGGTGGGAGATGCCTGGCGCTCACACCGTaGCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATC +
Preference number: 3 (lower is better)
Translates to: GGAGGRCLALTP*QQWPPRLCVSI
Trigger: GATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGCCCCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
3UTR-3UTR CAA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCGCCGTCTGGGGGAACTaGCCCTTGGCCAGGGCCAGG +
Preference number: 3 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVAVWGN*PLARAR
Trigger: CCTGGCCCTGGCCAAGGGCAAGTTCCCCCAGACGGC...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR CCA 72 bp GCGTCGCTGCTGGCTCGGGAAAGGTTGGGCGTGACATaGCCACGGCGCGAACCCACTGGGCTTGGCTCCTGG +
Preference number: 3 (lower is better)
Translates to: ASLLARERLGVT*PRREPTGLGSW
Trigger: CCAGGAGCCAAGCCCAGTGGGTTCGCGCCGTGGCCATGTCACGCCCAACCTTTCCCGAGCCAGCAGCGACGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR TCA 72 bp GGTCTGCGTCGCTGCTGGCTCGGGAAAGGTTGGGCGTaGCATGGCCACGGCGCGAACCCACTGGGCTTGGCT +
Preference number: 3 (lower is better)
Translates to: GLRRCWLGKGWA*HGHGANPLGLA
Trigger: AGCCAAGCCCAGTGGGTTCGCGCCGTGGCCATGTCACGCCCAACCTTTCCCGAGCCAGCAGCGACGCAGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR TCA 72 bp CCACCACGGAGGCGCTCTTGGGGCCCAGTGGGTTGCTaGTGGGGATGGTGTACGTCAGCACCCGGCGCTGGT +
Preference number: 3 (lower is better)
Translates to: PPRRRSWGPVGC*WGWCTSAPGAG
Trigger: ACCAGCGCCGGGTGCTGACGTACACCATCCCCATCAGCAACCCACTGGGCCCCAAGAGCGCCTCCGTGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR TCA 72 bp AGAGAGGAGAGGCTGGTGCGGGGATCAGGTCAGGGGTaGTGGGCGCCTGGGCCGGGAGAACAGAGAGAAGGG +
Preference number: 3 (lower is better)
Translates to: REERLVRGSGQG*WAPGPGEQREG
Trigger: CCCTTCTCTCTGTTCTCCCGGCCCAGGCGCCCATCACCCCTGACCTGATCCCCGCACCAGCCTCTCCTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424536.2
3UTR CCA 72 bp GGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTaGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGT +
Preference number: 3 (lower is better)
Translates to: GGRCLALTPCQQ*PPRLCVSICPC
Trigger: ACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
3UTR CCA 72 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTaGTCCCCACGTCTGCACAGCCCCTGGTTGGGCCGT +
Preference number: 3 (lower is better)
Translates to: GQLPGLKCISVP*SPRLHSPWLGR
Trigger: ACGGCCCAACCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
3UTR CCA 72 bp GTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTaGGGGAACAGCTGCGTGGCCGGGGTCCTCAGGAAA +
Preference number: 3 (lower is better)
Translates to: VAAEALCVHLSM*GNSCVAGVLRK
Trigger: TTTCCTGAGGACCCCGGCCACGCAGCTGTTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR-3UTR CAA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCAAGGATCTGCCTCCACTaGTGCACCTCCACGCTGTGG +
Preference number: 3 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPRICLH*CTSTLW
Trigger: CCACAGCGTGGAGGTGCACAAGTGGAGGCAGATCCT...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR GCA 72 bp AGCTCCACGGAGGCCCGCAGGATCTGCCTCCACTTGTaGACCTCCACGCTGTGGAATTGCTTCTGCAGCGCC +
Preference number: 3 (lower is better)
Translates to: SSTEARRICLHL*TSTLWNCFCSA
Trigger: GGCGCTGCAGAAGCAATTCCACAGCGTGGAGGTGCACAAGTGGAGGCAGATCCTGCGGGCCTCCGTGGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR GCA 72 bp AAGCCCTGGAGGAAGGGCGAGTCCGAGAAGAGCATCTaGTGGAGCCGCTCAGCGCCCACATGGAAGACAGAG +
Preference number: 3 (lower is better)
Translates to: KPWRKGESEKSI*WSRSAPTWKTE
Trigger: CTCTGTCTTCCATGTGGGCGCTGAGCGGCTCCAGCAGATGCTCTTCTCGGACTCGCCCTTCCTCCAGGGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR GCA 72 bp CTCCACTTGTGCACCTCCACGCTGTGGAATTGCTTCTaGAGCGCCAGGATCTCGGCCCACTCTGTGGCCGTC +
Preference number: 3 (lower is better)
Translates to: LHLCTSTLWNCF*SARISAHSVAV
Trigger: GACGGCCACAGAGTGGGCCGAGATCCTGGCGCTGCAGAAGCAATTCCACAGCGTGGAGGTGCACAAGTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR CCA 72 bp CGCAGGATCTGCCTCCACTTGTGCACCTCCACGCTGTaGAATTGCTTCTGCAGCGCCAGGATCTCGGCCCAC +
Preference number: 3 (lower is better)
Translates to: RRICLHLCTSTL*NCFCSARISAH
Trigger: GTGGGCCGAGATCCTGGCGCTGCAGAAGCAATTCCACAGCGTGGAGGTGCACAAGTGGAGGCAGATCCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR-3UTR CAA 90 bp GTGTCTGTCAATAGCTCCTCACTGGGCAGCAGATCCAAGGGGCCCAGGGTGGTGTCTACCTGCTCCTCCTaGTCCTCCTCTGCCCCATGG +
Preference number: 3 (lower is better)
Translates to: VSVNSSSLGSRSKGPRVVSTCSS*SSSAPW
Trigger: CCATGGGGCAGAGGAGGACAAGGAGGAGCAGGTAGA...CACCACCCTGGGCCCCTTGGATCTGCTGCCCAGTGAGGAGCTATTGACAGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR GCA 72 bp ATCTCATCCAGGAGCTCCACGGAGGCCCGCAGGATCTaGCTCCACTTGTGCACCTCCACGCTGTGGAATTGC +
Preference number: 3 (lower is better)
Translates to: ISSRSSTEARRI*LHLCTSTLWNC
Trigger: GCAATTCCACAGCGTGGAGGTGCACAAGTGGAGGCAGATCCTGCGGGCCTCCGTGGAGCTCCTGGATGAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR-3UTR CAA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGACTTCTGACCCTTTATaGGGGCACTGTCGGCCCCAA +
Preference number: 3 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWTSDPL*GHCRPQ
Trigger: TTGGGGCCGACAGTGCCCCAATAAAGGGTCAGAAGT...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
3UTR-3UTR CAA 90 bp CAAAGGTGTGGGCTGTCCTTTCCAGGGACCAGAGGCGGTAGAAGAGCAGGACGTGACAGCTTCTCAGCCTaGGCGAGCTCTCGCTCCAGA +
Preference number: 3 (lower is better)
Translates to: QRCGLSFPGTRGGRRAGRDSFSA*ASSRSR
Trigger: TCTGGAGCGAGAGCTCGCCAAGGCTGAGAAGCTGTC...ACGTCCTGCTCTTCTACCGCCTCTGGTCCCTGGAAAGGACAGCCCACACCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR TCA 72 bp GCCGGGGCTGGGTGTCAAAGGGAGGGTCTGAGACTGTaGTGCCTTGGTGCAGCTTCTCCAGCGAGAACTTCA +
Preference number: 3 (lower is better)
Translates to: AGAGCQREGLRL*CLGAASPARTS
Trigger: TGAAGTTCTCGCTGGAGAAGCTGCACCAAGGCATCACAGTCTCAGACCCTCCCTTTGACACCCAGCCCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR GCA 72 bp ATCTGCCTCCACTTGTGCACCTCCACGCTGTGGAATTaGTTCTGCAGCGCCAGGATCTCGGCCCACTCTGTG +
Preference number: 3 (lower is better)
Translates to: ICLHLCTSTLWN*FCSARISAHSV
Trigger: CACAGAGTGGGCCGAGATCCTGGCGCTGCAGAAGCAATTCCACAGCGTGGAGGTGCACAAGTGGAGGCAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR-3UTR CAA 90 bp GAGAAGAGCATCTGCTGGAGCCGCTCAGCGCCCACATGGAAGACAGAGTTGATGACTTCTGACCCTTTATaGGGGCACTGTCGGCCCCAA +
Preference number: 3 (lower is better)
Translates to: EKSICWSRSAPTWKTELMTSDPL*GHCRPQ
Trigger: TTGGGGCCGACAGTGCCCCAATAAAGGGTCAGAAGT...CATCAACTCTGTCTTCCATGTGGGCGCTGAGCGGCTCCAGCAGATGCTCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600231.5
3UTR TCA 72 bp AATAGTCTTCAATGCCGCTCCACGAGTTCTTCTCAATaGGCGACTTCACCAGGCTCCACGGCTGCTTTCGGT +
Preference number: 3 (lower is better)
Translates to: NSLQCRSTSSSQ*ATSPGSTAAFG
Trigger: ACCGAAAGCAGCCGTGGAGCCTGGTGAAGTCGCTCATTGAGAAGAACTCGTGGAGCGGCATTGAAGACTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCCCAAGGGGCCCAGGGTaGTGGGCCCGTCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLPRGPG*WARQAG
Trigger: CCCAGCCTGACGGGCCCACCACCCTGGGCCCCTTGG...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCAGGGAGCCCGAGGTGTaGATGCCGGCCCGGGCACAG +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLREPEV*MPARAQ
Trigger: CTGTGCCCGGGCCGGCATTCACACCTCGGGCTCCCT...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCGGGGCGGGTGGGAGATaGCTGGCGCTCACACCGTGC +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLGAGGR*LALTPC
Trigger: GCACGGTGTGAGCGCCAGGCATCTCCCACCCGCCCC...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCCGGCTGCCTAGGCTCTaGGTGCTGGGGGTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLRLPRL*VLGVPG
Trigger: GCCTGGGACCCCCAGCACCCAGAGCCTAGGCAGCCG...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCCGTCTGCACAGCCCCTaGTTGGGCCGTCGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLRLHSP*LGRREG
Trigger: CCCCTCCCGACGGCCCAACCAGGGGCTGTGCAGACG...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCGGAGCGATGGGGAGCTaGTTGGCGTGCTCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLGAMGS*LACSGQ
Trigger: CTGGCCGGAGCACGCCAAGCAGCTCCCCATCGCTCC...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCCCGTCTGGGGGAACTTaGCCTTGGCCAGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLPSGGT*PWPGPG
Trigger: GCCTGGCCCTGGCCAAGGGCAAGTTCCCCCAGACGG...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCCGTGGTCCCCACGTCTaGACAGCCCCTGGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLRGPHV*TAPGWA
Trigger: GGCCCAACCAGGGGCTGTGCAGACGTGGGGACCACG...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGGTTCTGGCTCAGGTaGGGGCCGGCTTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLWFWLR*GPAWGQ
Trigger: CTGCCCCCAAGCCGGCCCCCACCTGAGCCAGAACCA...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp AGGAGGCGGCCGGAGAGGTCGGGAAGCAGGGCAGCCAAGTCCGCTTCCTCCCCAAGGGGCCCAGGGTGGTaGGCCCGTCAGGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: RRRPERSGSRAAKSASSPRGPGW*ARQAGW
Trigger: CCACCCAGCCTGACGGGCCCACCACCCTGGGCCCCT...TGGGGAGGAAGCGGACTTGGCTGCCCTGCTTCCCGACCTCTCCGGCCGCCTCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CCA 90 bp CCCCGTGAGCCCGCCAGCTCAGGGGCCGCTTCCGCCGCCGCAGGCCGGATAGCATCATCGGGCCGGGGCTaGGTGTCAAAGGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: PREPASSGAASAAAGRIASSGRG*VSKGGS
Trigger: AGACCCTCCCTTTGACACCCAGCCCCGGCCCGATGA...TGCTATCCGGCCTGCGGCGGCGGAAGCGGCCCCTGAGCTGGCGGGCTCACGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR GCA 90 bp AGGAGGCGGCCGGAGAGGTCGGGAAGCAGGGCAGCCAAGTCCGCTTCCTCCCCAGGCTTGGCTCCTGGCTaGGGTCAGCTGCCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: RRRPERSGSRAAKSASSPGLAPG*GQLPPR
Trigger: CCTCGGGGGCAGCTGACCGCAGCCAGGAGCCAAGCC...TGGGGAGGAAGCGGACTTGGCTGCCCTGCTTCCCGACCTCTCCGGCCGCCTCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR GCA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGGCACTGGGGATGCCTaGCCCGGGGCCCTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCGTGDA*PGALVH
Trigger: GTGGACCAGGGCCCCGGGGCAGGCATCCCCAGTGCC...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCGGCACTGGGGATGCCTaGCCCGGGGCCCTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVGTGDA*PGALVH
Trigger: GTGGACCAGGGCCCCGGGGCAGGCATCCCCAGTGCC...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCATGTGGGGGAACAGCTaGGTGGCCGGGGTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLMWGNS*VAGVLR
Trigger: CCTGAGGACCCCGGCCACGCAGCTGTTCCCCCACAT...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGAGGGGCCCAGGGTGGTaGGCCCGTCAGGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLRGPGW*ARQAGW
Trigger: CCACCCAGCCTGACGGGCCCACCACCCTGGGCCCCT...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGCCAAGGGGCCCAGGGTaGTGGGCCCGTCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLPRGPG*WARQAG
Trigger: CCCAGCCTGACGGGCCCACCACCCTGGGCCCCTTGG...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCAGCACCCGGCGCTGGTaGCACTTGCTGTCCCCACTC +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLSTRRW*HLLSPL
Trigger: GAGTGGGGACAGCAAGTGCCACCAGCGCCGGGTGCT...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCACACCGTGCCAGCAGTaGCCGCCGAGGCTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLTPCQQ*PPRLCV
Trigger: CACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGT...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTTGCACAGCCCCTGGTTaGGCCGTCGGGAGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCCTAPG*AVGRGG
Trigger: CCCGCCCCTCCCGACGGCCCAACCAGGGGCTGTGCA...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCGCCAGAGGCGGAAGATaGGGAGGAAGCAGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLARGGR*GGSSGH
Trigger: GTGACCGCTGCTTCCTCCTCATCTTCCGCCTCTGGC...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGAGGGAGCCCGAGGTGTaGATGCCGGCCCGGGCACAG +
Preference number: 4 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLREPEV*MPARAQ
Trigger: CTGTGCCCGGGCCGGCATTCACACCTCGGGCTCCCT...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCAGGGAGCCCGAGGTGTaGATGCCGGCCCGGGCACAG +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVREPEV*MPARAQ
Trigger: CTGTGCCCGGGCCGGCATTCACACCTCGGGCTCCCT...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGGTGTCGAACATGGATaGGGCGCGGTGGGCGCGCCC +
Preference number: 4 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCGVEHG*GAVGAP
Trigger: GGGCGCGCCCACCGCGCCGCATCCATGTTCGACACC...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCCTTGGGGGCAGGAGCTaGAGCCGTTTCCGGAGCGAT +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLLGGRS*SRFRSD
Trigger: ATCGCTCCGGAAACGGCTGCAGCTCCTGCCCCCAAG...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGGGCTTGGCTCCTGGCTaGGGTCAGCTGCCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLGLAPG*GQLPPR
Trigger: CCTCGGGGGCAGCTGACCGCAGCCAGGAGCCAAGCC...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp AGGAGGCGGCCGGAGAGGTCGGGAAGCAGGGCAGCCAAGTCCGCTTCCTCCCCAGCTGGGTGGGCTCTGTaGTCGGGGGTTCAGCCACCG +
Preference number: 4 (lower is better)
Translates to: RRRPERSGSRAAKSASSPAGWAL*SGVQPP
Trigger: CGGTGGCTGAACCCCCGAGCACAGAGCCCACCCAGC...TGGGGAGGAAGCGGACTTGGCTGCCCTGCTTCCCGACCTCTCCGGCCGCCTCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR GCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTCCGAGAAGAGCATCTaGTGGAGCCGCTCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLSEKSI*WSRSAP
Trigger: GGGCGCTGAGCGGCTCCAGCAGATGCTCTTCTCGGA...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCGGGCCAGACCCAGGATaGAGTAGCGGTGGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLGPDPG*SSGGQC
Trigger: ACACTGCCCACCGCTACTGCATCCTGGGTCTGGCCC...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAGGCACTGGGGATGCCTaGCCCGGGGCCCTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGGTGDA*PGALVH
Trigger: GTGGACCAGGGCCCCGGGGCAGGCATCCCCAGTGCC...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTCTGGCGCTCACACCGTaGCAGCAGTGGCCGCCGAGG +
Preference number: 4 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCLALTP*QQWPPR
Trigger: CCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAG...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGCTGGCGCTCACACCGTaGCAGCAGTGGCCGCCGAGG +
Preference number: 4 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLLALTP*QQWPPR
Trigger: CCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAG...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
70% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCCTCCACCATGGTGCCTaGTTCTGGCTCAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLLHHGA*FWLRWG
Trigger: CCCCCACCTGAGCCAGAACCAGGCACCATGGTGGAG...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCAGGATCTCGGCCCACTCTGTGGCCGTCTGGGGGAACTTGCCCTTGGCCAGGGCGGCTGCCTAGGCTCTaGGTGCTGGGGGTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PGSRPTLWPSGGTCPWPGRLPRL*VLGVPG
Trigger: GCCTGGGACCCCCAGCACCCAGAGCCTAGGCAGCCG...CCCTGGCCAAGGGCAAGTTCCCCCAGACGGCCACAGAGTGGGCCGAGATCCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCAGGTTGGGCGTGACATaGCCACGGCGCGAACCCACT +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLRLGVT*PRREPT
Trigger: AGTGGGTTCGCGCCGTGGCCATGTCACGCCCAACCT...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCGAGGAGGCGTCTGGCTaGCTGTCTACCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLEEASG*LSTCSS
Trigger: GGAGGAGCAGGTAGACAGCCAGCCAGACGCCTCCTC...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp TTCCGCCGCCGCAGGCCGGATAGCAAGCCCCGGGCATCCTTCCCGCCTTCCTCCACCGGGGTCACTGTCTaGCTGGAGGAGGCGTCTGGC +
Preference number: 4 (lower is better)
Translates to: FRRRRPDSKPRASFPPSSTGVTV*LEEASG
Trigger: GCCAGACGCCTCCTCCAGCCAGACAGTGACCCCGGT...GGAGGAAGGCGGGAAGGATGCCCGGGGCTTGCTATCCGGCCTGCGGCGGCGGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CCA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCCAAGGGGCCCAGGGTaGTGGGCCCGTCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVPRGPG*WARQAG
Trigger: CCCAGCCTGACGGGCCCACCACCCTGGGCCCCTTGG...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTCGTCTGCACAGCCCCTaGTTGGGCCGTCGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCRLHSP*LGRREG
Trigger: CCCCTCCCGACGGCCCAACCAGGGGCTGTGCAGACG...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCGTCTGCACAGCCCCTaGTTGGGCCGTCGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVRLHSP*LGRREG
Trigger: CCCCTCCCGACGGCCCAACCAGGGGCTGTGCAGACG...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCAGGTGTCGAACATGGATaGGGCGCGGTGGGCGCGCCC +
Preference number: 4 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPGVEHG*GAVGAP
Trigger: GGGCGCGCCCACCGCGCCGCATCCATGTTCGACACC...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCCATGGTCTGCGTCGCTaGTGGCTCGGGAAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLHGLRR*WLGKGW
Trigger: CCAACCTTTCCCGAGCCAGCAGCGACGCAGACCATG...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCACTGGCGCTCACACCGTaGCAGCAGTGGCCGCCGAGG +
Preference number: 4 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPLALTP*QQWPPR
Trigger: CCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAG...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CCCATGGTCTGCGTCGCTGCTGGCTCGGGAAAGGTTGGGCGTGACATGGCCACGGGGGCGGGTGGGAGATaGCTGGCGCTCACACCGTGC +
Preference number: 4 (lower is better)
Translates to: PMVCVAAGSGKVGRDMATGAGGR*LALTPC
Trigger: GCACGGTGTGAGCGCCAGGCATCTCCCACCCGCCCC...CGTGGCCATGTCACGCCCAACCTTTCCCGAGCCAGCAGCGACGCAGACCATGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR GCA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGCGTGGTCCCCACGTCTaGACAGCCCCTGGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLRGPHV*TAPGWA
Trigger: GGCCCAACCAGGGGCTGTGCAGACGTGGGGACCACG...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGCTAGGCTCTGGGTGCTaGGGGTCCCAGGCACCCCAC +
Preference number: 4 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLLGSGC*GSQAPH
Trigger: GTGGGGTGCCTGGGACCCCCAGCACCCAGAGCCTAG...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCTAGGCTCTGGGTGCTaGGGGTCCCAGGCACCCCAC +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVLGSGC*GSQAPH
Trigger: GTGGGGTGCCTGGGACCCCCAGCACCCAGAGCCTAG...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTCTAGGCTCTGGGTGCTaGGGGTCCCAGGCACCCCAC +
Preference number: 4 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCLGSGC*GSQAPH
Trigger: GTGGGGTGCCTGGGACCCCCAGCACCCAGAGCCTAG...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGACGGCTGCCTAGGCTCTaGGTGCTGGGGGTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGRLPRL*VLGVPG
Trigger: GCCTGGGACCCCCAGCACCCAGAGCCTAGGCAGCCG...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAAAGGGGCCCAGGGTGGTaGGCCCGTCAGGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: RASSGRRGSVCPSVHVGERGPGW*ARQAGW
Trigger: CCACCCAGCCTGACGGGCCCACCACCCTGGGCCCCT...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp AGGCCGGGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTAGGGGCCCAGGGTGGTaGGCCCGTCAGGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: RPGQLPGLKCISVPWSPRRGPGW*ARQAGW
Trigger: CCACCCAGCCTGACGGGCCCACCACCCTGGGCCCCT...ACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GGGTTGCTGATGGGGATGGTGTACGTCAGCACCCGGCGCTGGTGGCACTTGCTGCCAAGGGGCCCAGGGTaGTGGGCCCGTCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GLLMGMVYVSTRRWWHLLPRGPG*WARQAG
Trigger: CCCAGCCTGACGGGCCCACCACCCTGGGCCCCTTGG...CAGCAAGTGCCACCAGCGCCGGGTGCTGACGTACACCATCCCCATCAGCAACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCGAGAAGAGCATCTGCTaGAGCCGCTCAGCGCCCACA +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLEKSIC*SRSAPT
Trigger: TGTGGGCGCTGAGCGGCTCCAGCAGATGCTCTTCTC...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTACAGGGGTCAGGATCTaGGTGCTGGGGCCCGTCCCC +
Preference number: 4 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCTGVRI*VLGPVP
Trigger: GGGGACGGGCCCCAGCACCCAGATCCTGACCCCTGT...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GGCCGGAGAGGTCGGGAAGCAGGGCAGCCAAGTCCGCTTCCTCCCCAGTGGATGGGGGGAACTTGCCCTTaGCCAGGGCCAGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: GRRGREAGQPSPLPPQWMGGTCP*PGPGCA
Trigger: GGCACAGCCTGGCCCTGGCCAAGGGCAAGTTCCCCC...CATCCACTGGGGAGGAAGCGGACTTGGCTGCCCTGCTTCCCGACCTCTCCGGCC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCGGGGGAACTTGCCCTTaGCCAGGGCCAGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVGGTCP*PGPGCA
Trigger: GGCACAGCCTGGCCCTGGCCAAGGGCAAGTTCCCCC...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGCATCTCGGTTCCGTaGTCCCCACGTCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLCISVP*SPRLHS
Trigger: GCTGTGCAGACGTGGGGACCACGGAACCGAGATGCA...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
3UTR CAA 72 bp GCCCCATGGTCTGCGTCGCTGCTGGCTCGGGAAAGGTaGGGCGTGACATGGCCACGGCGCGAACCCACTGGG +
Preference number: 4 (lower is better)
Translates to: APWSASLLARER*GVTWPRREPTG
Trigger: CCCAGTGGGTTCGCGCCGTGGCCATGTCACGCCCAACCTTTCCCGAGCCAGCAGCGACGCAGACCATGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR TCA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGCTGCCCCCGAGGAGGTaGTGTCGCTCAGGGCGATCA +
Preference number: 4 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLLPPRR*CRSGRS
Trigger: TGATCGCCCTGAGCGACATCACCTCCTCGGGGGCAG...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGGGGAAAGGTTGGGCGTaGCATGGCCACGGCGCGAAC +
Preference number: 4 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLGKGWA*HGHGAN
Trigger: GTTCGCGCCGTGGCCATGTCACGCCCAACCTTTCCC...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCGGGAAAGGTTGGGCGTaGCATGGCCACGGCGCGAAC +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVGKGWA*HGHGAN
Trigger: GTTCGCGCCGTGGCCATGTCACGCCCAACCTTTCCC...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGGGAAAGGTTGGGCGTaGCATGGCCACGGCGCGAAC +
Preference number: 4 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCGKGWA*HGHGAN
Trigger: GTTCGCGCCGTGGCCATGTCACGCCCAACCTTTCCC...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGCGGAGAAGCGGGAGCTaGGGGAGCCCGAGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLRRSGS*GSPRCE
Trigger: TTCACACCTCGGGCTCCCTCAGCTCCCGCTTCTCCG...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAGGAGCGATGGGGAGCTaGTTGGCGTGCTCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGGAMGS*LACSGQ
Trigger: CTGGCCGGAGCACGCCAAGCAGCTCCCCATCGCTCC...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCGCTTCTCGCTCTCCGTaGAGATCTGGATGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLASRSP*RSGWRW
Trigger: CCAACGCCATCCAGATCTGCACGGAGAGCGAGAAGC...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTCTCTGCCCCATGGTCTaGGTCGCTGCTGGCTCGGGA +
Preference number: 4 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCLCPMV*VAAGSG
Trigger: TCCCGAGCCAGCAGCGACGCAGACCATGGGGCAGAG...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGCACTGGGGATGCCTaGCCCGGGGCCCTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: LTPCQQWPPRLCVSICPCGTGDA*PGALVH
Trigger: GTGGACCAGGGCCCCGGGGCAGGCATCCCCAGTGCC...ACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGACCGTCTGGGGGAACTTaGCCTTGGCCAGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGPSGGT*PWPGPG
Trigger: GCCTGGCCCTGGCCAAGGGCAAGTTCCCCCAGACGG...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCACCGTCTGGGGGAACTTaGCCTTGGCCAGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPPSGGT*PWPGPG
Trigger: GCCTGGCCCTGGCCAAGGGCAAGTTCCCCCAGACGG...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CCCCGTGAGCCCGCCAGCTCAGGGGCCGCTTCCGCCGCCGCAGGCCGGATAGCAACTGTGATGCCTTGGTaGAGCTTCTCCAGCGAGAAC +
Preference number: 4 (lower is better)
Translates to: PREPASSGAASAAAGRIATVMPW*SFSSEN
Trigger: GTTCTCGCTGGAGAAGCTGCACCAAGGCATCACAGT...TGCTATCCGGCCTGCGGCGGCGGAAGCGGCCCCTGAGCTGGCGGGCTCACGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR GCA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTATGTGGGGGAACAGCTaGGTGGCCGGGGTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCMWGNS*VAGVLR
Trigger: CCTGAGGACCCCGGCCACGCAGCTGTTCCCCCACAT...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGATGTGGGGGAACAGCTaGGTGGCCGGGGTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLMWGNS*VAGVLR
Trigger: CCTGAGGACCCCGGCCACGCAGCTGTTCCCCCACAT...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp AGGCCGGGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTGGGGCGGGTGGGAGATaGCTGGCGCTCACACCGTGC +
Preference number: 4 (lower is better)
Translates to: RPGQLPGLKCISVPWSPRGAGGR*LALTPC
Trigger: GCACGGTGTGAGCGCCAGGCATCTCCCACCCGCCCC...ACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGACGTGGTCCCCACGTCTaGACAGCCCCTGGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGRGPHV*TAPGWA
Trigger: GGCCCAACCAGGGGCTGTGCAGACGTGGGGACCACG...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCTGCTTCCGCTGCCCTaGTGGGAGGTCAGGCGAGCC +
Preference number: 4 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVLLPLP*WEVRRA
Trigger: GGCTCGCCTGACCTCCCAGCAGGGCAGCGGAAGCAG...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS-3UTR CCA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGGTGTGGTGTCGAACATaGATGCGGCGCGGTGGGCGC +
Preference number: 4 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLVWCRT*MRRGGR
Trigger: GCGCCCACCGCGCCGCATCCATGTTCGACACCACAC...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCGATGGGGAGCTGCTTaGCGTGCTCCGGCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVRWGAA*RAPARV
Trigger: CACTCTGGCCGGAGCACGCCAAGCAGCTCCCCATCG...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGCGATGGGGAGCTGCTTaGCGTGCTCCGGCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLRWGAA*RAPARV
Trigger: CACTCTGGCCGGAGCACGCCAAGCAGCTCCCCATCG...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GGCTCGGGAAAGGTTGGGCGTGACATGGCCACGGCGCGAACCCACTGGGCTTGGCGATGGGGAGCTGCTTaGCGTGCTCCGGCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: GSGKVGRDMATARTHWAWRWGAA*RAPARV
Trigger: CACTCTGGCCGGAGCACGCCAAGCAGCTCCCCATCG...CCAAGCCCAGTGGGTTCGCGCCGTGGCCATGTCACGCCCAACCTTTCCCGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CCA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGCATGGTGCCTGGTTCTaGCTCAGGTGGGGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLHGAWF*LRWGPA
Trigger: AGCCGGCCCCCACCTGAGCCAGAACCAGGCACCATG...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCTAGGCTCTGGGTGCTaGGGGTCCCAGGCACCCCAC +
Preference number: 4 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVLGSGC*GSQAPH
Trigger: GTGGGGTGCCTGGGACCCCCAGCACCCAGAGCCTAG...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAACGGCTGCCTAGGCTCTaGGTGCTGGGGGTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: RASSGRRGSVCPSVHVGERLPRL*VLGVPG
Trigger: GCCTGGGACCCCCAGCACCCAGAGCCTAGGCAGCCG...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCCCGTGCAGATCTGGATaGCGTTGGGGATCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLPCRSG*RWGSAW
Trigger: CCAAGCTGATCCCCAACGCCATCCAGATCTGCACGG...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCCTCTCCGTGCAGATCTaGATGGCGTTGGGGATCAGC +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLLSVQI*MALGIS
Trigger: GCTGATCCCCAACGCCATCCAGATCTGCACGGAGAG...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTCGAACCCACTGGGCTTaGCTCCTGGCTGCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCRTHWA*LLAAVS
Trigger: GCTGACCGCAGCCAGGAGCCAAGCCCAGTGGGTTCG...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGCGAACCCACTGGGCTTaGCTCCTGGCTGCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLRTHWA*LLAAVS
Trigger: GCTGACCGCAGCCAGGAGCCAAGCCCAGTGGGTTCG...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCGAACCCACTGGGCTTaGCTCCTGGCTGCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVRTHWA*LLAAVS
Trigger: GCTGACCGCAGCCAGGAGCCAAGCCCAGTGGGTTCG...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGGGTCTGCGTCGCTGCTaGCTCGGGAAAGGTTGGGCG +
Preference number: 4 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLGLRRC*LGKGWA
Trigger: CGCCCAACCTTTCCCGAGCCAGCAGCGACGCAGACC...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGACCGGGGTCACTGTCTaGCTGGAGGAGGCGTCTGGC +
Preference number: 4 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLTGVTV*LEEASG
Trigger: GCCAGACGCCTCCTCCAGCCAGACAGTGACCCCGGT...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGAGGGGCCCAGGGTGGTaGGCCCGTCAGGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWRGPGW*ARQAGW
Trigger: CCACCCAGCCTGACGGGCCCACCACCCTGGGCCCCT...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGAGCACCCGGCGCTGGTaGCACTTGCTGTCCCCACTC +
Preference number: 4 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLSTRRW*HLLSPL
Trigger: GAGTGGGGACAGCAAGTGCCACCAGCGCCGGGTGCT...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGGTCAGCACCCGGCGCTaGTGGCACTTGCTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLVSTRR*WHLLSP
Trigger: TGGGGACAGCAAGTGCCACCAGCGCCGGGTGCTGAC...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCGTCAGCACCCGGCGCTaGTGGCACTTGCTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVVSTRR*WHLLSP
Trigger: TGGGGACAGCAAGTGCCACCAGCGCCGGGTGCTGAC...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCGGGGGAACTTGCCCTTaGCCAGGGCCAGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVGGTCP*PGPGCA
Trigger: GGCACAGCCTGGCCCTGGCCAAGGGCAAGTTCCCCC...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAGGGGGAACTTGCCCTTaGCCAGGGCCAGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGGGTCP*PGPGCA
Trigger: GGCACAGCCTGGCCCTGGCCAAGGGCAAGTTCCCCC...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTACACCGTGCCAGCAGTaGCCGCCGAGGCTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCTPCQQ*PPRLCV
Trigger: CACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGT...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCGGGTGGGAGATGCCTaGCGCTCACACCGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVRVGDA*RSHRAS
Trigger: GCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCG...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACTGCACAGCCCCTGGTTaGGCCGTCGGGAGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHCTAPG*AVGRGG
Trigger: CCCGCCCCTCCCGACGGCCCAACCAGGGGCTGTGCA...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGACTTCCGCTGCCCTGCTaGGAGGTCAGGCGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGLPLPC*EVRRAL
Trigger: CAGGGCTCGCCTGACCTCCCAGCAGGGCAGCGGAAG...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS-3UTR CCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCGTGCTCCGGCCAGAGTaGGGTGTGGTGCTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVVLRPE*GVVLSW
Trigger: CCAGGACAGCACCACACCCCACTCTGGCCGGAGCAC...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS-3UTR TCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCGGTGAGGCCCAGCTCTaGGCCGTAGCACTGATGCAC +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVGEAQL*AVALMH
Trigger: GTGCATCAGTGCTACGGCTCAGAGCTGGGCCTCACC...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000680623.1
CDS-3UTR TCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGACTGCCCCCGAGGAGGTaGTGTCGCTCAGGGCGATCA +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGLPPRR*CRSGRS
Trigger: TGATCGCCCTGAGCGACATCACCTCCTCGGGGGCAG...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCAGGGAAAGGTTGGGCGTaGCATGGCCACGGCGCGAAC +
Preference number: 4 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPGKGWA*HGHGAN
Trigger: GTTCGCGCCGTGGCCATGTCACGCCCAACCTTTCCC...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAGGGAAAGGTTGGGCGTaGCATGGCCACGGCGCGAAC +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGGKGWA*HGHGAN
Trigger: GTTCGCGCCGTGGCCATGTCACGCCCAACCTTTCCC...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGGGAGCCCGAGGTGTaGATGCCGGCCCGGGCACAG +
Preference number: 4 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHREPEV*MPARAQ
Trigger: CTGTGCCCGGGCCGGCATTCACACCTCGGGCTCCCT...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCGAGGGTCTGAGACTGTaGTGCCTTGGTGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLEGLRL*CLGAAS
Trigger: AGAAGCTGCACCAAGGCATCACAGTCTCAGACCCTC...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCCTGGATGGCGTTATGTaGATGATGGGCACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLLDGVM*MMGTSR
Trigger: CCTGGAGGTGCCCATCATTCACATAACGCCATCCAG...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS-3UTR GCA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACGGTGTCGAACATGGATaGGGCGCGGTGGGCGCGCCC +
Preference number: 4 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHGVEHG*GAVGAP
Trigger: GGGCGCGCCCACCGCGCCGCATCCATGTTCGACACC...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCACTGGCTGCGGTCAGCTaGCCCCGAGGAGGTGATGTC +
Preference number: 4 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPLAAVS*PRGGDV
Trigger: GACATCACCTCCTCGGGGGCAGCTGACCGCAGCCAG...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGGGCTTGGCTCCTGGCTaGGGTCAGCTGCCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWGLAPG*GQLPPR
Trigger: CCTCGGGGGCAGCTGACCGCAGCCAGGAGCCAAGCC...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGCTTGGCTCCTGGCTaGGGTCAGCTGCCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: LTPCQQWPPRLCVSICPCGLAPG*GQLPPR
Trigger: CCTCGGGGGCAGCTGACCGCAGCCAGGAGCCAAGCC...ACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp AGGAGGCGGCCGGAGAGGTCGGGAAGCAGGGCAGCCAAGTCCGCTTCCTCCCCACATGGTCTGCGTCGCTaGTGGCTCGGGAAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: RRRPERSGSRAAKSASSPHGLRR*WLGKGW
Trigger: CCAACCTTTCCCGAGCCAGCAGCGACGCAGACCATG...TGGGGAGGAAGCGGACTTGGCTGCCCTGCTTCCCGACCTCTCCGGCCGCCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR GCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGACTCTGCCCCATGGTCTaGGTCGCTGCTGGCTCGGGA +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGLCPMV*VAAGSG
Trigger: TCCCGAGCCAGCAGCGACGCAGACCATGGGGCAGAG...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCGGGCCAGACCCAGGATaGAGTAGCGGTGGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVGPDPG*SSGGQC
Trigger: ACACTGCCCACCGCTACTGCATCCTGGGTCTGGCCC...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp TCATCTCATCCAGGAGCTCCACGGAGGCCCGCAGGATCTGCCTCCACTTGTGCAGGCACTGGGGATGCCTaGCCCGGGGCCCTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: SSHPGAPRRPAGSASTCAGTGDA*PGALVH
Trigger: GTGGACCAGGGCCCCGGGGCAGGCATCCCCAGTGCC...TGCACAAGTGGAGGCAGATCCTGCGGGCCTCCGTGGAGCTCCTGGATGAGATGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR GCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCGCCAGGGCCAGGCTGTaGCAGGACTCAAAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVARARL*QDSKVW
Trigger: CCACACCTTTGAGTCCTGGCACAGCCTGGCCCTGGC...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTCCACGCTGTGGAATTaGTTCTGCAGCGCCAGGATC +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLSTLWN*FCSARI
Trigger: GATCCTGGCGCTGCAGAAGCAATTCCACAGCGTGGA...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCAATGTGGGGGAACAGCTaGGTGGCCGGGGTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPMWGNS*VAGVLR
Trigger: CCTGAGGACCCCGGCCACGCAGCTGTTCCCCCACAT...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACCTGGCGCTCACACCGTaGCAGCAGTGGCCGCCGAGG +
Preference number: 4 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHLALTP*QQWPPR
Trigger: CCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAG...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCCTCCCTGGTCTAAAGTaGATCTCGGTTCCGTGGTCC +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLLPGLK*ISVPWS
Trigger: GGACCACGGAACCGAGATGCACTTTAGACCAGGGAG...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCTGTCACCCTGTGGCTaGTGCTTCCGCTGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVLSPCG*CFRCPA
Trigger: AGCAGGGCAGCGGAAGCAGCAGCCACAGGGTGACAG...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS-3UTR CCA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCAGTGTGGTGTCGAACATaGATGCGGCGCGGTGGGCGC +
Preference number: 4 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPVWCRT*MRRGGR
Trigger: GCGCCCACCGCGCCGCATCCATGTTCGACACCACAC...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGACGATGGGGAGCTGCTTaGCGTGCTCCGGCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGRWGAA*RAPARV
Trigger: CACTCTGGCCGGAGCACGCCAAGCAGCTCCCCATCG...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp AGGCCGGGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTTGGTTCTGGCTCAGGTaGGGGCCGGCTTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RPGQLPGLKCISVPWSPRWFWLR*GPAWGQ
Trigger: CTGCCCCCAAGCCGGCCCCCACCTGAGCCAGAACCA...ACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCACATGGTGCCTGGTTCTaGCTCAGGTGGGGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPHGAWF*LRWGPA
Trigger: AGCCGGCCCCCACCTGAGCCAGAACCAGGCACCATG...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAACTAGGCTCTGGGTGCTaGGGGTCCCAGGCACCCCAC +
Preference number: 4 (lower is better)
Translates to: RASSGRRGSVCPSVHVGELGSGC*GSQAPH
Trigger: GTGGGGTGCCTGGGACCCCCAGCACCCAGAGCCTAG...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCAGATCTGGATGGCGTTaGGGATCAGCTTGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLRSGWR*GSAWPS
Trigger: AGACGGCCAAGCTGATCCCCAACGCCATCCAGATCT...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGACGAACCCACTGGGCTTaGCTCCTGGCTGCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGRTHWA*LLAAVS
Trigger: GCTGACCGCAGCCAGGAGCCAAGCCCAGTGGGTTCG...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCAGGTTGGGCGTGACATaGCCACGGCGCGAACCCACT +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVRLGVT*PRREPT
Trigger: AGTGGGTTCGCGCCGTGGCCATGTCACGCCCAACCT...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCAGGTCTGCGTCGCTGCTaGCTCGGGAAAGGTTGGGCG +
Preference number: 4 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPGLRRC*LGKGWA
Trigger: CGCCCAACCTTTCCCGAGCCAGCAGCGACGCAGACC...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCTCCTCCTCTGCCCCATaGTCTGCGTCGCTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVSSSAP*SASLLA
Trigger: AGCCAGCAGCGACGCAGACCATGGGGCAGAGGAGGA...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTTCCTCCTCTGCCCCATaGTCTGCGTCGCTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCSSSAP*SASLLA
Trigger: AGCCAGCAGCGACGCAGACCATGGGGCAGAGGAGGA...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCAGGATCTCGGCCCACTCTGTGGCCGTCTGGGGGAACTTGCCCTTGGCCAGGGTCCTCCTCTGCCCCATaGTCTGCGTCGCTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: PGSRPTLWPSGGTCPWPGSSSAP*SASLLA
Trigger: AGCCAGCAGCGACGCAGACCATGGGGCAGAGGAGGA...CCCTGGCCAAGGGCAAGTTCCCCCAGACGGCCACAGAGTGGGCCGAGATCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCGAGGAGGCGTCTGGCTaGCTGTCTACCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVEEASG*LSTCSS
Trigger: GGAGGAGCAGGTAGACAGCCAGCCAGACGCCTCCTC...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGAGGAGGCGTCTGGCTaGCTGTCTACCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCEEASG*LSTCSS
Trigger: GGAGGAGCAGGTAGACAGCCAGCCAGACGCCTCCTC...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCACCGGGGTCACTGTCTaGCTGGAGGAGGCGTCTGGC +
Preference number: 4 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVTGVTV*LEEASG
Trigger: GCCAGACGCCTCCTCCAGCCAGACAGTGACCCCGGT...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTCAATAGCTCCTCACTaGGCAGCAGATCCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLSIAPH*AADPRG
Trigger: GCCCCTTGGATCTGCTGCCCAGTGAGGAGCTATTGA...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAGTCAGCACCCGGCGCTaGTGGCACTTGCTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGVSTRR*WHLLSP
Trigger: TGGGGACAGCAAGTGCCACCAGCGCCGGGTGCTGAC...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAAACAGGGGTCAGGATCTaGGTGCTGGGGCCCGTCCCC +
Preference number: 4 (lower is better)
Translates to: RASSGRRGSVCPSVHVGETGVRI*VLGPVP
Trigger: GGGGACGGGCCCCAGCACCCAGATCCTGACCCCTGT...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCACTCTGTGGCCGTCTaGGGGAACTTGCCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVHSVAV*GNLPLA
Trigger: GGCCAAGGGCAAGTTCCCCCAGACGGCCACAGAGTG...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCTCTCGGCCCACTCTGTaGCCGTCTGGGGGAACTTGC +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVSRPTL*PSGGTC
Trigger: GCAAGTTCCCCCAGACGGCCACAGAGTGGGCCGAGA...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCGAGACTGTGATGCCTTaGTGCAGCTTCTCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLETVMP*CSFSSE
Trigger: CTCGCTGGAGAAGCTGCACCAAGGCATCACAGTCTC...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCATCGGGCCGGGGCTaGGTGTCAAAGGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLSSGRG*VSKGGS
Trigger: AGACCCTCCCTTTGACACCCAGCCCCGGCCCGATGA...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCGGGGGAACAGCTGCGTaGCCGGGGTCCTCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVGGTAA*PGSSGK
Trigger: TTTTCCTGAGGACCCCGGCCACGCAGCTGTTCCCCC...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAACGGGTGGGAGATGCCTaGCGCTCACACCGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: RASSGRRGSVCPSVHVGERVGDA*RSHRAS
Trigger: GCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCG...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp AGGCCGGGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCGGGTGGGAGATGCCTaGCGCTCACACCGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: RPGQLPGLKCISVPWSPRRVGDA*RSHRAS
Trigger: GCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCG...ACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGCGTCTGCACAGCCCCTaGTTGGGCCGTCGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWRLHSP*LGRREG
Trigger: CCCCTCCCGACGGCCCAACCAGGGGCTGTGCAGACG...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp AGGAGGCGGCCGGAGAGGTCGGGAAGCAGGGCAGCCAAGTCCGCTTCCTCCCCATGCATCTCGGTTCCGTaGTCCCCACGTCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: RRRPERSGSRAAKSASSPCISVP*SPRLHS
Trigger: GCTGTGCAGACGTGGGGACCACGGAACCGAGATGCA...TGGGGAGGAAGCGGACTTGGCTGCCCTGCTTCCCGACCTCTCCGGCCGCCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCAGACTCTGCGGGTCTaGCATCCTCTGCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVQTLRV*HPLLLP
Trigger: CGGCAGCAGCAGAGGATGCCAGACCCGCAGAGTCTG...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS-3UTR TCA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCAGCCAGAGGCGGAAGATaGGGAGGAAGCAGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPARGGR*GGSSGH
Trigger: GTGACCGCTGCTTCCTCCTCATCTTCCGCCTCTGGC...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAGCCAGAGGCGGAAGATaGGGAGGAAGCAGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGARGGR*GGSSGH
Trigger: GTGACCGCTGCTTCCTCCTCATCTTCCGCCTCTGGC...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCCTCATCCTCACTGGTaGGGCCCAGCTCTGAGCCGT +
Preference number: 4 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVPHPHW*GPALSR
Trigger: ACGGCTCAGAGCTGGGCCTCACCAGTGAGGATGAGG...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000680623.1
CDS-3UTR TCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGACCTCATCCTCACTGGTaGGGCCCAGCTCTGAGCCGT +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGPHPHW*GPALSR
Trigger: ACGGCTCAGAGCTGGGCCTCACCAGTGAGGATGAGG...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000680623.1
CDS-3UTR TCA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAACTGCCCCCGAGGAGGTaGTGTCGCTCAGGGCGATCA +
Preference number: 4 (lower is better)
Translates to: RASSGRRGSVCPSVHVGELPPRR*CRSGRS
Trigger: TGATCGCCCTGAGCGACATCACCTCCTCGGGGGCAG...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGGGCCCAGTGGGTTGCTaGTGGGGATGGTGTACGTCA +
Preference number: 4 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLGPVGC*WGWCTS
Trigger: TGACGTACACCATCCCCATCAGCAACCCACTGGGCC...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp TCACCAGGCTCCACGGCTGCTTTCGGTAGCGGATCTCAGAAGACACTCGGAGCCAGGGAGCCCGAGGTGTaGATGCCGGCCCGGGCACAG +
Preference number: 4 (lower is better)
Translates to: SPGSTAAFGSGSQKTLGAREPEV*MPARAQ
Trigger: CTGTGCCCGGGCCGGCATTCACACCTCGGGCTCCCT...GGCTCCGAGTGTCTTCTGAGATCCGCTACCGAAAGCAGCCGTGGAGCCTGGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR GCA 90 bp GTGTCTGTCAATAGCTCCTCACTGGGCAGCAGATCCAAGGGGCCCAGGGTGGTGGGTGTCGAACATGGATaGGGCGCGGTGGGCGCGCCC +
Preference number: 4 (lower is better)
Translates to: VSVNSSSLGSRSKGPRVVGVEHG*GAVGAP
Trigger: GGGCGCGCCCACCGCGCCGCATCCATGTTCGACACC...CACCACCCTGGGCCCCTTGGATCTGCTGCCCAGTGAGGAGCTATTGACAGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR GCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGGGGAGCTGCTTGGCGTaGTCCGGCCAGAGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWGSCLA*SGQSGV
Trigger: CACCCCACTCTGGCCGGAGCACGCCAAGCAGCTCCC...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGAGCGATGGGGAGCTaGTTGGCGTGCTCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: LTPCQQWPPRLCVSICPCGAMGS*LACSGQ
Trigger: CTGGCCGGAGCACGCCAAGCAGCTCCCCATCGCTCC...ACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCTTGGGGGCAGGAGCTaGAGCCGTTTCCGGAGCGAT +
Preference number: 4 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVLGGRS*SRFRSD
Trigger: ATCGCTCCGGAAACGGCTGCAGCTCCTGCCCCCAAG...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp TCGCTGCTGGCTCGGGAAAGGTTGGGCGTGACATGGCCACGGCGCGAACCCACTCTTGGGGGCAGGAGCTaGAGCCGTTTCCGGAGCGAT +
Preference number: 4 (lower is better)
Translates to: SLLARERLGVTWPRREPTLGGRS*SRFRSD
Trigger: ATCGCTCCGGAAACGGCTGCAGCTCCTGCCCCCAAG...AGTGGGTTCGCGCCGTGGCCATGTCACGCCCAACCTTTCCCGAGCCAGCAGCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR GCA 90 bp TGGAGCCGCTCAGCGCCCACATGGAAGACAGAGTTGATGAGGAGGCGGCCGGAGCTGGCTGCGGTCAGCTaGCCCCGAGGAGGTGATGTC +
Preference number: 4 (lower is better)
Translates to: WSRSAPTWKTELMRRRPELAAVS*PRGGDV
Trigger: GACATCACCTCCTCGGGGGCAGCTGACCGCAGCCAG...CTCCGGCCGCCTCCTCATCAACTCTGTCTTCCATGTGGGCGCTGAGCGGCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR GCA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAACTGGCTGCGGTCAGCTaGCCCCGAGGAGGTGATGTC +
Preference number: 4 (lower is better)
Translates to: RASSGRRGSVCPSVHVGELAAVS*PRGGDV
Trigger: GACATCACCTCCTCGGGGGCAGCTGACCGCAGCCAG...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGCATGGTCTGCGTCGCTaGTGGCTCGGGAAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLHGLRR*WLGKGW
Trigger: CCAACCTTTCCCGAGCCAGCAGCGACGCAGACCATG...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp AGGCCGGGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTCTGCCCCATGGTCTaGGTCGCTGCTGGCTCGGGA +
Preference number: 4 (lower is better)
Translates to: RPGQLPGLKCISVPWSPRLCPMV*VAAGSG
Trigger: TCCCGAGCCAGCAGCGACGCAGACCATGGGGCAGAG...ACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGCTGGGTGGGCTCTGTaGTCGGGGGTTCAGCCACCG +
Preference number: 4 (lower is better)
Translates to: LTPCQQWPPRLCVSICPCAGWAL*SGVQPP
Trigger: CGGTGGCTGAACCCCCGAGCACAGAGCCCACCCAGC...ACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACGCTGGGTGGGCTCTGTaGTCGGGGGTTCAGCCACCG +
Preference number: 4 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHAGWAL*SGVQPP
Trigger: CGGTGGCTGAACCCCCGAGCACAGAGCCCACCCAGC...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGGCTGGGTGGGCTCTGTaGTCGGGGGTTCAGCCACCG +
Preference number: 4 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWAGWAL*SGVQPP
Trigger: CGGTGGCTGAACCCCCGAGCACAGAGCCCACCCAGC...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGATCCGAGAAGAGCATCTaGTGGAGCCGCTCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGSEKSI*WSRSAP
Trigger: GGGCGCTGAGCGGCTCCAGCAGATGCTCTTCTCGGA...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CCCATGGTCTGCGTCGCTGCTGGCTCGGGAAAGGTTGGGCGTGACATGGCCACGTCCGAGAAGAGCATCTaGTGGAGCCGCTCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: PMVCVAAGSGKVGRDMATSEKSI*WSRSAP
Trigger: GGGCGCTGAGCGGCTCCAGCAGATGCTCTTCTCGGA...CGTGGCCATGTCACGCCCAACCTTTCCCGAGCCAGCAGCGACGCAGACCATGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR GCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTCTGTGAACTTGCACTaGTGTAGGAAGCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLSVNLH*CRKPWR
Trigger: CCTCCAGGGCTTCCTACAGCAGTGCAAGTTCACAGA...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCAGTCCTGGTAGGGGATaGCCTGCGTCAGCACCTCGG +
Preference number: 4 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVSPGRG*PASAPR
Trigger: CCGAGGTGCTGACGCAGGGCATCCCCTACCAGGACT...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAAGTCCTGGTAGGGGATaGCCTGCGTCAGCACCTCGG +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGSPGRG*PASAPR
Trigger: CCGAGGTGCTGACGCAGGGCATCCCCTACCAGGACT...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCAGGGCCAGACCCAGGATaGAGTAGCGGTGGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPGPDPG*SSGGQC
Trigger: ACACTGCCCACCGCTACTGCATCCTGGGTCTGGCCC...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp AGACACTCGGAGCCGCGCCTTGTTCCGGGCCAGACCCAGGATGCAGTAGCGGTGGGGCCAGACCCAGGATaGAGTAGCGGTGGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: RHSEPRLVPGQTQDAVAVGPDPG*SSGGQC
Trigger: ACACTGCCCACCGCTACTGCATCCTGGGTCTGGCCC...CACCGCTACTGCATCCTGGGTCTGGCCCGGAACAAGGCGCGGCTCCGAGTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR GCA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCGCCAGGGCCAGGCTGTaGCAGGACTCAAAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVARARL*QDSKVW
Trigger: CCACACCTTTGAGTCCTGGCACAGCCTGGCCCTGGC...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGCCGTCTGGGGGAACTTaGCCTTGGCCAGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWPSGGT*PWPGPG
Trigger: GCCTGGCCCTGGCCAAGGGCAAGTTCCCCCAGACGG...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCATCTGCCTCCACTTGTaGACCTCCACGCTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLICLHL*TSTLWN
Trigger: ATTCCACAGCGTGGAGGTGCACAAGTGGAGGCAGAT...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCGAGGCCCGCAGGATCTaGCTCCACTTGTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVEARRI*LHLCTS
Trigger: GGAGGTGCACAAGTGGAGGCAGATCCTGCGGGCCTC...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp AGACACTCGGAGCCGCGCCTTGTTCCGGGCCAGACCCAGGATGCAGTAGCGGTGGAGGCCCGCAGGATCTaGCTCCACTTGTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: RHSEPRLVPGQTQDAVAVEARRI*LHLCTS
Trigger: GGAGGTGCACAAGTGGAGGCAGATCCTGCGGGCCTC...CACCGCTACTGCATCCTGGGTCTGGCCCGGAACAAGGCGCGGCTCCGAGTGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR GCA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCAGAGGCCCGCAGGATCTaGCTCCACTTGTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPEARRI*LHLCTS
Trigger: GGAGGTGCACAAGTGGAGGCAGATCCTGCGGGCCTC...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp AGGCCGGGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTATGTGGGGGAACAGCTaGGTGGCCGGGGTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: RPGQLPGLKCISVPWSPRMWGNS*VAGVLR
Trigger: CCTGAGGACCCCGGCCACGCAGCTGTTCCCCCACAT...ACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp TCACCAGGCTCCACGGCTGCTTTCGGTAGCGGATCTCAGAAGACACTCGGAGCCCTGGCGCTCACACCGTaGCAGCAGTGGCCGCCGAGG +
Preference number: 4 (lower is better)
Translates to: SPGSTAAFGSGSQKTLGALALTP*QQWPPR
Trigger: CCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAG...GGCTCCGAGTGTCTTCTGAGATCCGCTACCGAAAGCAGCCGTGGAGCCTGGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR GCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGCGTGGTCCCCACGTCTaGACAGCCCCTGGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWRGPHV*TAPGWA
Trigger: GGCCCAACCAGGGGCTGTGCAGACGTGGGGACCACG...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTGCTCCGGCCAGAGTaGGGTGTGGTGTCGAACATG +
Preference number: 4 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCVLRPE*GVVSNM
Trigger: CATGTTCGACACCACACCCCACTCTGGCCGGAGCAC...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCCGTTTCCGGAGCGATaGGGAGCTGCTTGGCGTGCT +
Preference number: 4 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVPFPER*GAAWRA
Trigger: AGCACGCCAAGCAGCTCCCCATCGCTCCGGAAACGG...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCACCGTTTCCGGAGCGATaGGGAGCTGCTTGGCGTGCT +
Preference number: 4 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPPFPER*GAAWRA
Trigger: AGCACGCCAAGCAGCTCCCCATCGCTCCGGAAACGG...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGTGGTTCTGGCTCAGGTaGGGGCCGGCTTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWWFWLR*GPAWGQ
Trigger: CTGCCCCCAAGCCGGCCCCCACCTGAGCCAGAACCA...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GAAGGGCGAGTCCGAGAAGAGCATCTGCTGGAGCCGCTCAGCGCCCACATGGAATGGTTCTGGCTCAGGTaGGGGCCGGCTTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: EGRVREEHLLEPLSAHMEWFWLR*GPAWGQ
Trigger: CTGCCCCCAAGCCGGCCCCCACCTGAGCCAGAACCA...TTCCATGTGGGCGCTGAGCGGCTCCAGCAGATGCTCTTCTCGGACTCGCCCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGACTCCACCATGGTGCCTaGTTCTGGCTCAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGLHHGA*FWLRWG
Trigger: CCCCCACCTGAGCCAGAACCAGGCACCATGGTGGAG...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCACTCCACCATGGTGCCTaGTTCTGGCTCAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPLHHGA*FWLRWG
Trigger: CCCCCACCTGAGCCAGAACCAGGCACCATGGTGGAG...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCGTCACTTCCTTCAGCTaGATGGAGATCGTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLVTSFS*MEIVVS
Trigger: GGAGACCACGATCTCCATCCAGCTGAAGGAAGTGAC...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp TTCCGCCGCCGCAGGCCGGATAGCAAGCCCCGGGCATCCTTCCCGCCTTCCTCCAGATCTGGATGGCGTTaGGGATCAGCTTGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: FRRRRPDSKPRASFPPSSRSGWR*GSAWPS
Trigger: AGACGGCCAAGCTGATCCCCAACGCCATCCAGATCT...GGAGGAAGGCGGGAAGGATGCCCGGGGCTTGCTATCCGGCCTGCGGCGGCGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CCA 90 bp AGGCCGGGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTGGTCTGCGTCGCTGCTaGCTCGGGAAAGGTTGGGCG +
Preference number: 4 (lower is better)
Translates to: RPGQLPGLKCISVPWSPRGLRRC*LGKGWA
Trigger: CGCCCAACCTTTCCCGAGCCAGCAGCGACGCAGACC...ACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCGAGAAGAGCATCTGCTaGAGCCGCTCAGCGCCCACA +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVEKSIC*SRSAPT
Trigger: TGTGGGCGCTGAGCGGCTCCAGCAGATGCTCTTCTC...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTGCTGTAGGAAGCCCTaGAGGAAGGGCGAGTCCGAG +
Preference number: 4 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLCCRKP*RKGESE
Trigger: CTCGGACTCGCCCTTCCTCCAGGGCTTCCTACAGCA...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GGGTTGCTGATGGGGATGGTGTACGTCAGCACCCGGCGCTGGTGGCACTTGCTGAGCACCCGGCGCTGGTaGCACTTGCTGTCCCCACTC +
Preference number: 4 (lower is better)
Translates to: GLLMGMVYVSTRRWWHLLSTRRW*HLLSPL
Trigger: GAGTGGGGACAGCAAGTGCCACCAGCGCCGGGTGCT...CAGCAAGTGCCACCAGCGCCGGGTGCTGACGTACACCATCCCCATCAGCAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CCA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAAGTCAGCACCCGGCGCTaGTGGCACTTGCTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: RASSGRRGSVCPSVHVGEVSTRR*WHLLSP
Trigger: TGGGGACAGCAAGTGCCACCAGCGCCGGGTGCTGAC...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACACAGGGGTCAGGATCTaGGTGCTGGGGCCCGTCCCC +
Preference number: 4 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHTGVRI*VLGPVP
Trigger: GGGGACGGGCCCCAGCACCCAGATCCTGACCCCTGT...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTACAGGGGTCAGGATCTaGGTGCTGGGGCCCGTCCCC +
Preference number: 4 (lower is better)
Translates to: LTPCQQWPPRLCVSICPCTGVRI*VLGPVP
Trigger: GGGGACGGGCCCCAGCACCCAGATCCTGACCCCTGT...ACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACGGGGGAACTTGCCCTTaGCCAGGGCCAGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHGGTCP*PGPGCA
Trigger: GGCACAGCCTGGCCCTGGCCAAGGGCAAGTTCCCCC...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGACACTCTGTGGCCGTCTaGGGGAACTTGCCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGHSVAV*GNLPLA
Trigger: GGCCAAGGGCAAGTTCCCCCAGACGGCCACAGAGTG...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCTCTCGGCCCACTCTGTaGCCGTCTGGGGGAACTTGC +
Preference number: 4 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVSRPTL*PSGGTC
Trigger: GCAAGTTCCCCCAGACGGCCACAGAGTGGGCCGAGA...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp AGGAGGCGGCCGGAGAGGTCGGGAAGCAGGGCAGCCAAGTCCGCTTCCTCCCCATGCACCTCCACGCTGTaGAATTGCTTCTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: RRRPERSGSRAAKSASSPCTSTL*NCFCSA
Trigger: GGCGCTGCAGAAGCAATTCCACAGCGTGGAGGTGCA...TGGGGAGGAAGCGGACTTGGCTGCCCTGCTTCCCGACCTCTCCGGCCGCCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CCA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGGTCCATCTGTCCATGTaGGGGAACAGCTGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLVHLSM*GNSCVA
Trigger: GGCCACGCAGCTGTTCCCCCACATGGACAGATGGAC...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCGTCCATCTGTCCATGTaGGGGAACAGCTGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVVHLSM*GNSCVA
Trigger: GGCCACGCAGCTGTTCCCCCACATGGACAGATGGAC...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACCGGGTGGGAGATGCCTaGCGCTCACACCGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHRVGDA*RSHRAS
Trigger: GCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCG...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CAAAGGTGTGGGCTGTCCTTTCCAGGGACCAGAGGCGGTAGAAGAGCAGGACGTTGCACAGCCCCTGGTTaGGCCGTCGGGAGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: QRCGLSFPGTRGGRRAGRCTAPG*AVGRGG
Trigger: CCCGCCCCTCCCGACGGCCCAACCAGGGGCTGTGCA...ACGTCCTGCTCTTCTACCGCCTCTGGTCCCTGGAAAGGACAGCCCACACCTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CCA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTTGCATCTCGGTTCCGTaGTCCCCACGTCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCCISVP*SPRLHS
Trigger: GCTGTGCAGACGTGGGGACCACGGAACCGAGATGCA...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCCTTCTGACCCTTTATTaGGGCACTGTCGGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLLLTLY*GTVGPK
Trigger: TTTGGGGCCGACAGTGCCCCAATAAAGGGTCAGAAG...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAAAGGTCAGGCGAGCCCTaGGGACTGCCCTGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: RASSGRRGSVCPSVHVGERSGEP*GLPCAN
Trigger: GTTGGCACAGGGCAGTCCCCAGGGCTCGCCTGACCT...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS-3UTR TCA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAAGCCAGAGGCGGAAGATaGGGAGGAAGCAGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: RASSGRRGSVCPSVHVGEARGGR*GGSSGH
Trigger: GTGACCGCTGCTTCCTCCTCATCTTCCGCCTCTGGC...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAAGGTGAGGCCCAGCTCTaGGCCGTAGCACTGATGCAC +
Preference number: 4 (lower is better)
Translates to: RASSGRRGSVCPSVHVGEGEAQL*AVALMH
Trigger: GTGCATCAGTGCTACGGCTCAGAGCTGGGCCTCACC...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000680623.1
CDS-3UTR TCA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACCTGCCCCCGAGGAGGTaGTGTCGCTCAGGGCGATCA +
Preference number: 4 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHLPPRR*CRSGRS
Trigger: TGATCGCCCTGAGCGACATCACCTCCTCGGGGGCAG...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAGGCCCAGTGGGTTGCTaGTGGGGATGGTGTACGTCA +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGGPVGC*WGWCTS
Trigger: TGACGTACACCATCCCCATCAGCAACCCACTGGGCC...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCAGGCCCAGTGGGTTGCTaGTGGGGATGGTGTACGTCA +
Preference number: 4 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPGPVGC*WGWCTS
Trigger: TGACGTACACCATCCCCATCAGCAACCCACTGGGCC...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGCGGAGAAGCGGGAGCTaGGGGAGCCCGAGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWRRSGS*GSPRCE
Trigger: TTCACACCTCGGGCTCCCTCAGCTCCCGCTTCTCCG...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACCGGAGAAGCGGGAGCTaGGGGAGCCCGAGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHRRSGS*GSPRCE
Trigger: TTCACACCTCGGGCTCCCTCAGCTCCCGCTTCTCCG...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp CTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTCGGAGAAGCGGGAGCTaGGGGAGCCCGAGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: LTPCQQWPPRLCVSICPCRRSGS*GSPRCE
Trigger: TTCACACCTCGGGCTCCCTCAGCTCCCGCTTCTCCG...ACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp TCATCTCATCCAGGAGCTCCACGGAGGCCCGCAGGATCTGCCTCCACTTGTGCAGGAGCGATGGGGAGCTaGTTGGCGTGCTCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: SSHPGAPRRPAGSASTCAGAMGS*LACSGQ
Trigger: CTGGCCGGAGCACGCCAAGCAGCTCCCCATCGCTCC...TGCACAAGTGGAGGCAGATCCTGCGGGCCTCCGTGGAGCTCCTGGATGAGATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR GCA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTCCTTCTCCACCATGGTaGCTGGTTCTGGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCPSPPW*LVLAQV
Trigger: CACCTGAGCCAGAACCAGGCACCATGGTGGAGAAGG...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCCACAATGAGGCGTTCTaGTTCGGGGAGTTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLHNEAF*FGEFAE
Trigger: TTCAGCAAACTCCCCGAAGCAGAACGCCTCATTGTG...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCGCTTCTCGCTCTCCGTaGAGATCTGGATGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVASRSP*RSGWRW
Trigger: CCAACGCCATCCAGATCTGCACGGAGAGCGAGAAGC...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACCTGGCTGCGGTCAGCTaGCCCCGAGGAGGTGATGTC +
Preference number: 4 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHLAAVS*PRGGDV
Trigger: GACATCACCTCCTCGGGGGCAGCTGACCGCAGCCAG...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGACATGGTCTGCGTCGCTaGTGGCTCGGGAAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGHGLRR*WLGKGW
Trigger: CCAACCTTTCCCGAGCCAGCAGCGACGCAGACCATG...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGGTCTGCGTCGCTaGTGGCTCGGGAAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVHGLRR*WLGKGW
Trigger: CCAACCTTTCCCGAGCCAGCAGCGACGCAGACCATG...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp GAAGGGCGAGTCCGAGAAGAGCATCTGCTGGAGCCGCTCAGCGCCCACATGGAACTCTGCCCCATGGTCTaGGTCGCTGCTGGCTCGGGA +
Preference number: 4 (lower is better)
Translates to: EGRVREEHLLEPLSAHMELCPMV*VAAGSG
Trigger: TCCCGAGCCAGCAGCGACGCAGACCATGGGGCAGAG...TTCCATGTGGGCGCTGAGCGGCTCCAGCAGATGCTCTTCTCGGACTCGCCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR GCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGCTCTGCCCCATGGTCTaGGTCGCTGCTGGCTCGGGA +
Preference number: 4 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWLCPMV*VAAGSG
Trigger: TCCCGAGCCAGCAGCGACGCAGACCATGGGGCAGAG...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp AGGCCGGGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTTCCGAGAAGAGCATCTaGTGGAGCCGCTCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: RPGQLPGLKCISVPWSPRSEKSI*WSRSAP
Trigger: GGGCGCTGAGCGGCTCCAGCAGATGCTCTTCTCGGA...ACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAAAGTCCTGGTAGGGGATaGCCTGCGTCAGCACCTCGG +
Preference number: 4 (lower is better)
Translates to: RASSGRRGSVCPSVHVGESPGRG*PASAPR
Trigger: CCGAGGTGCTGACGCAGGGCATCCCCTACCAGGACT...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAAGGGCCAGACCCAGGATaGAGTAGCGGTGGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: RASSGRRGSVCPSVHVGEGPDPG*SSGGQC
Trigger: ACACTGCCCACCGCTACTGCATCCTGGGTCTGGCCC...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp GGGTTGCTGATGGGGATGGTGTACGTCAGCACCCGGCGCTGGTGGCACTTGCTGGCCAGGGCCAGGCTGTaGCAGGACTCAAAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GLLMGMVYVSTRRWWHLLARARL*QDSKVW
Trigger: CCACACCTTTGAGTCCTGGCACAGCCTGGCCCTGGC...CAGCAAGTGCCACCAGCGCCGGGTGCTGACGTACACCATCCCCATCAGCAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR GCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCTGTGGAATTGCTTCTaGAGCGCCAGGATCTCGGCC +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVLWNCF*SARISA
Trigger: GGCCGAGATCCTGGCGCTGCAGAAGCAATTCCACAG...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp GGCCGGAGAGGTCGGGAAGCAGGGCAGCCAAGTCCGCTTCCTCCCCAGTGGATGCTGTGGAATTGCTTCTaGAGCGCCAGGATCTCGGCC +
Preference number: 4 (lower is better)
Translates to: GRRGREAGQPSPLPPQWMLWNCF*SARISA
Trigger: GGCCGAGATCCTGGCGCTGCAGAAGCAATTCCACAG...CATCCACTGGGGAGGAAGCGGACTTGGCTGCCCTGCTTCCCGACCTCTCCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR GCA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAAGAGGCCCGCAGGATCTaGCTCCACTTGTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: RASSGRRGSVCPSVHVGEEARRI*LHLCTS
Trigger: GGAGGTGCACAAGTGGAGGCAGATCCTGCGGGCCTC...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGTGTGGTGTCGAACATaGATGCGGCGCGGTGGGCGC +
Preference number: 4 (lower is better)
Translates to: LTPCQQWPPRLCVSICPCVWCRT*MRRGGR
Trigger: GCGCCCACCGCGCCGCATCCATGTTCGACACCACAC...ACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp TGGAGCCGCTCAGCGCCCACATGGAAGACAGAGTTGATGAGGAGGCGGCCGGAGCCGTTTCCGGAGCGATaGGGAGCTGCTTGGCGTGCT +
Preference number: 4 (lower is better)
Translates to: WSRSAPTWKTELMRRRPEPFPER*GAAWRA
Trigger: AGCACGCCAAGCAGCTCCCCATCGCTCCGGAAACGG...CTCCGGCCGCCTCCTCATCAACTCTGTCTTCCATGTGGGCGCTGAGCGGCTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CCA 90 bp CTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTCATGGTGCCTGGTTCTaGCTCAGGTGGGGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: LTPCQQWPPRLCVSICPCHGAWF*LRWGPA
Trigger: AGCCGGCCCCCACCTGAGCCAGAACCAGGCACCATG...ACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GGCTCGGGAAAGGTTGGGCGTGACATGGCCACGGCGCGAACCCACTGGGCTTGGCCGTGCAGATCTGGATaGCGTTGGGGATCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: GSGKVGRDMATARTHWAWPCRSG*RWGSAW
Trigger: CCAAGCTGATCCCCAACGCCATCCAGATCTGCACGG...CCAAGCCCAGTGGGTTCGCGCCGTGGCCATGTCACGCCCAACCTTTCCCGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCCGTGCAGATCTGGATaGCGTTGGGGATCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVPCRSG*RWGSAW
Trigger: CCAAGCTGATCCCCAACGCCATCCAGATCTGCACGG...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTCTCTCCGTGCAGATCTaGATGGCGTTGGGGATCAGC +
Preference number: 4 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCLSVQI*MALGIS
Trigger: GCTGATCCCCAACGCCATCCAGATCTGCACGGAGAG...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTCCCACTTCCTTaGGGGTCCCCAGACCGTTCA +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVHLPLP*GSPDRS
Trigger: TGAACGGTCTGGGGACCCCCAAGGAAGTGGGAGATG...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTCGAACCCACTGGGCTTaGCTCCTGGCTGCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LTPCQQWPPRLCVSICPCRTHWA*LLAAVS
Trigger: GCTGACCGCAGCCAGGAGCCAAGCCCAGTGGGTTCG...ACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAAAGGTTGGGCGTGACATaGCCACGGCGCGAACCCACT +
Preference number: 4 (lower is better)
Translates to: RASSGRRGSVCPSVHVGERLGVT*PRREPT
Trigger: AGTGGGTTCGCGCCGTGGCCATGTCACGCCCAACCT...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp AGGCCGGGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTTCCTCCTCTGCCCCATaGTCTGCGTCGCTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: RPGQLPGLKCISVPWSPRSSSAP*SASLLA
Trigger: AGCCAGCAGCGACGCAGACCATGGGGCAGAGGAGGA...ACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp AGGCCGGGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTGAGGAGGCGTCTGGCTaGCTGTCTACCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RPGQLPGLKCISVPWSPREEASG*LSTCSS
Trigger: GGAGGAGCAGGTAGACAGCCAGCCAGACGCCTCCTC...ACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACACCGGGGTCACTGTCTaGCTGGAGGAGGCGTCTGGC +
Preference number: 4 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHTGVTV*LEEASG
Trigger: GCCAGACGCCTCCTCCAGCCAGACAGTGACCCCGGT...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCAGAGAAGAGCATCTGCTaGAGCCGCTCAGCGCCCACA +
Preference number: 4 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPEKSIC*SRSAPT
Trigger: TGTGGGCGCTGAGCGGCTCCAGCAGATGCTCTTCTC...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCGAGAAGAGCATCTGCTaGAGCCGCTCAGCGCCCACA +
Preference number: 4 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVEKSIC*SRSAPT
Trigger: TGTGGGCGCTGAGCGGCTCCAGCAGATGCTCTTCTC...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGATGCTGTAGGAAGCCCTaGAGGAAGGGCGAGTCCGAG +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGCCRKP*RKGESE
Trigger: CTCGGACTCGCCCTTCCTCCAGGGCTTCCTACAGCA...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCTGCTGTAGGAAGCCCTaGAGGAAGGGCGAGTCCGAG +
Preference number: 4 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVCCRKP*RKGESE
Trigger: CTCGGACTCGCCCTTCCTCCAGGGCTTCCTACAGCA...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGAGCACCCGGCGCTGGTaGCACTTGCTGTCCCCACTC +
Preference number: 4 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWSTRRW*HLLSPL
Trigger: GAGTGGGGACAGCAAGTGCCACCAGCGCCGGGTGCT...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCGCCCTGGTCCACAGATaGTTCGGAGAAGCGGGAGCT +
Preference number: 4 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVALVHR*FGEAGA
Trigger: AGCTCCCGCTTCTCCGAACCATCTGTGGACCAGGGC...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAGCCCTGGTCCACAGATaGTTCGGAGAAGCGGGAGCT +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGALVHR*FGEAGA
Trigger: AGCTCCCGCTTCTCCGAACCATCTGTGGACCAGGGC...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp AGGCCGGGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTTCTCGGCCCACTCTGTaGCCGTCTGGGGGAACTTGC +
Preference number: 4 (lower is better)
Translates to: RPGQLPGLKCISVPWSPRSRPTL*PSGGTC
Trigger: GCAAGTTCCCCCAGACGGCCACAGAGTGGGCCGAGA...ACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTGCACCTCCACGCTGTaGAATTGCTTCTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLCTSTL*NCFCSA
Trigger: GGCGCTGCAGAAGCAATTCCACAGCGTGGAGGTGCA...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAATCATCGGGCCGGGGCTaGGTGTCAAAGGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: RASSGRRGSVCPSVHVGESSGRG*VSKGGS
Trigger: AGACCCTCCCTTTGACACCCAGCCCCGGCCCGATGA...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGACACCGTGCCAGCAGTaGCCGCCGAGGCTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWTPCQQ*PPRLCV
Trigger: CACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGT...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTACACCGTGCCAGCAGTaGCCGCCGAGGCTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LTPCQQWPPRLCVSICPCTPCQQ*PPRLCV
Trigger: CACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGT...ACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAGCCGGGCCAGCTCCCTaGTCTAAAGTGCATCTCGGT +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGAGPAP*SKVHLG
Trigger: ACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGC...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAAGGCCAGAGTGGGGTGTaGTGCTGTCCTGGGACAGAC +
Preference number: 4 (lower is better)
Translates to: RASSGRRGSVCPSVHVGEGQSGV*CCPGTD
Trigger: GTCTGTCCCAGGACAGCACCACACCCCACTCTGGCC...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS-3UTR TCA 90 bp CTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGTGAGGCCCAGCTCTaGGCCGTAGCACTGATGCAC +
Preference number: 4 (lower is better)
Translates to: LTPCQQWPPRLCVSICPCGEAQL*AVALMH
Trigger: GTGCATCAGTGCTACGGCTCAGAGCTGGGCCTCACC...ACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000680623.1
CDS-3UTR TCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGCCTCATCCTCACTGGTaGGGCCCAGCTCTGAGCCGT +
Preference number: 4 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWPHPHW*GPALSR
Trigger: ACGGCTCAGAGCTGGGCCTCACCAGTGAGGATGAGG...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000680623.1
CDS-3UTR TCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCGTCAAAGGGAGGGTCTaGGACTGTGATGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVVKGRV*DCDALV
Trigger: CACCAAGGCATCACAGTCTCAGACCCTCCCTTTGAC...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCAAAGGGAGGGTCTaGGACTGTGATGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCVKGRV*DCDALV
Trigger: CACCAAGGCATCACAGTCTCAGACCCTCCCTTTGAC...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAGCTTCTCGCTCTCCGTaGAGATCTGGATGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGASRSP*RSGWRW
Trigger: CCAACGCCATCCAGATCTGCACGGAGAGCGAGAAGC...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACTCCGAGAAGAGCATCTaGTGGAGCCGCTCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHSEKSI*WSRSAP
Trigger: GGGCGCTGAGCGGCTCCAGCAGATGCTCTTCTCGGA...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp AGGAGGCGGCCGGAGAGGTCGGGAAGCAGGGCAGCCAAGTCCGCTTCCTCCCCATCTGTGAACTTGCACTaGTGTAGGAAGCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: RRRPERSGSRAAKSASSPSVNLH*CRKPWR
Trigger: CCTCCAGGGCTTCCTACAGCAGTGCAAGTTCACAGA...TGGGGAGGAAGCGGACTTGGCTGCCCTGCTTCCCGACCTCTCCGGCCGCCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR GCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGAGTCCTGGTAGGGGATaGCCTGCGTCAGCACCTCGG +
Preference number: 4 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWSPGRG*PASAPR
Trigger: CCGAGGTGCTGACGCAGGGCATCCCCTACCAGGACT...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTAGTCCTGGTAGGGGATaGCCTGCGTCAGCACCTCGG +
Preference number: 4 (lower is better)
Translates to: LTPCQQWPPRLCVSICPCSPGRG*PASAPR
Trigger: CCGAGGTGCTGACGCAGGGCATCCCCTACCAGGACT...ACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGCCAGGGCCAGGCTGTaGCAGGACTCAAAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LTPCQQWPPRLCVSICPCARARL*QDSKVW
Trigger: CCACACCTTTGAGTCCTGGCACAGCCTGGCCCTGGC...ACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACGCCAGGGCCAGGCTGTaGCAGGACTCAAAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHARARL*QDSKVW
Trigger: CCACACCTTTGAGTCCTGGCACAGCCTGGCCCTGGC...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCTCCACGCTGTGGAATTaGTTCTGCAGCGCCAGGATC +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVSTLWN*FCSARI
Trigger: GATCCTGGCGCTGCAGAAGCAATTCCACAGCGTGGA...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGAGGCCCGCAGGATCTaGCTCCACTTGTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: LTPCQQWPPRLCVSICPCEARRI*LHLCTS
Trigger: GGAGGTGCACAAGTGGAGGCAGATCCTGCGGGCCTC...ACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGCTCCCTGGTCTAAAGTaGATCTCGGTTCCGTGGTCC +
Preference number: 4 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLLPGLK*ISVPWS
Trigger: GGACCACGGAACCGAGATGCACTTTAGACCAGGGAG...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGACAGAGTGGGGTGTGGTaGTGTCCTGGGACAGACTCT +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGQSGVW*CPGTDS
Trigger: AGAGTCTGTCCCAGGACAGCACCACACCCCACTCTG...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS-3UTR CCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGCCGTTTCCGGAGCGATaGGGAGCTGCTTGGCGTGCT +
Preference number: 4 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWPFPER*GAAWRA
Trigger: AGCACGCCAAGCAGCTCCCCATCGCTCCGGAAACGG...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTCTCCACCATGGTGCCTaGTTCTGGCTCAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: LTPCQQWPPRLCVSICPCLHHGA*FWLRWG
Trigger: CCCCCACCTGAGCCAGAACCAGGCACCATGGTGGAG...ACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GGCTCGGGAAAGGTTGGGCGTGACATGGCCACGGCGCGAACCCACTGGGCTTGGATCCCTTCTCCACCATaGTGCCTGGTTCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GSGKVGRDMATARTHWAWIPSPP*CLVLAQ
Trigger: CTGAGCCAGAACCAGGCACCATGGTGGAGAAGGGAT...CCAAGCCCAGTGGGTTCGCGCCGTGGCCATGTCACGCCCAACCTTTCCCGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CCA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGCTTCCTTCAGCTGGATaGAGATCGTGGTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLLPSAG*RSWSPS
Trigger: GCTGGGAGACCACGATCTCCATCCAGCTGAAGGAAG...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTCTTCCTTCAGCTGGATaGAGATCGTGGTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCLPSAG*RSWSPS
Trigger: GCTGGGAGACCACGATCTCCATCCAGCTGAAGGAAG...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTAGATCTGGATGGCGTTaGGGATCAGCTTGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCRSGWR*GSAWPS
Trigger: AGACGGCCAAGCTGATCCCCAACGCCATCCAGATCT...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCACTCTCCGTGCAGATCTaGATGGCGTTGGGGATCAGC +
Preference number: 4 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPLSVQI*MALGIS
Trigger: GCTGATCCCCAACGCCATCCAGATCTGCACGGAGAG...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp AGACACTCGGAGCCGCGCCTTGTTCCGGGCCAGACCCAGGATGCAGTAGCGGTGCTCTCCGTGCAGATCTaGATGGCGTTGGGGATCAGC +
Preference number: 4 (lower is better)
Translates to: RHSEPRLVPGQTQDAVAVLSVQI*MALGIS
Trigger: GCTGATCCCCAACGCCATCCAGATCTGCACGGAGAG...CACCGCTACTGCATCCTGGGTCTGGCCCGGAACAAGGCGCGGCTCCGAGTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGACATCTCCCACTTCCTTaGGGGTCCCCAGACCGTTCA +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGHLPLP*GSPDRS
Trigger: TGAACGGTCTGGGGACCCCCAAGGAAGTGGGAGATG...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGGTTGGGCGTGACATaGCCACGGCGCGAACCCACT +
Preference number: 4 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHRLGVT*PRREPT
Trigger: AGTGGGTTCGCGCCGTGGCCATGTCACGCCCAACCT...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTTCCTCCTCTGCCCCATaGTCTGCGTCGCTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LTPCQQWPPRLCVSICPCSSSAP*SASLLA
Trigger: AGCCAGCAGCGACGCAGACCATGGGGCAGAGGAGGA...ACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACGAGGAGGCGTCTGGCTaGCTGTCTACCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHEEASG*LSTCSS
Trigger: GGAGGAGCAGGTAGACAGCCAGCCAGACGCCTCCTC...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCAATAGCTCCTCACTaGGCAGCAGATCCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLSIAPH*AADPRG
Trigger: GCCCCTTGGATCTGCTGCCCAGTGAGGAGCTATTGA...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCTCAATAGCTCCTCACTaGGCAGCAGATCCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVSIAPH*AADPRG
Trigger: GCCCCTTGGATCTGCTGCCCAGTGAGGAGCTATTGA...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp AGGCCGGGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTTGCTGTAGGAAGCCCTaGAGGAAGGGCGAGTCCGAG +
Preference number: 4 (lower is better)
Translates to: RPGQLPGLKCISVPWSPRCCRKP*RKGESE
Trigger: CTCGGACTCGCCCTTCCTCCAGGGCTTCCTACAGCA...ACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGTCTCGGCCCACTCTGTaGCCGTCTGGGGGAACTTGC +
Preference number: 4 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWSRPTL*PSGGTC
Trigger: GCAAGTTCCCCCAGACGGCCACAGAGTGGGCCGAGA...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGCACCTCCACGCTGTaGAATTGCTTCTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPCTSTL*NCFCSA
Trigger: GGCGCTGCAGAAGCAATTCCACAGCGTGGAGGTGCA...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTTCATCGGGCCGGGGCTaGGTGTCAAAGGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: LTPCQQWPPRLCVSICPCSSGRG*VSKGGS
Trigger: AGACCCTCCCTTTGACACCCAGCCCCGGCCCGATGA...ACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGTCATCGGGCCGGGGCTaGGTGTCAAAGGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWSSGRG*VSKGGS
Trigger: AGACCCTCCCTTTGACACCCAGCCCCGGCCCGATGA...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACGGGGGAACAGCTGCGTaGCCGGGGTCCTCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHGGTAA*PGSSGK
Trigger: TTTTCCTGAGGACCCCGGCCACGCAGCTGTTCCCCC...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp AGGCCGGGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTTGCATCTCGGTTCCGTaGTCCCCACGTCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: RPGQLPGLKCISVPWSPRCISVP*SPRLHS
Trigger: GCTGTGCAGACGTGGGGACCACGGAACCGAGATGCA...ACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp AGGCCGGGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTGCCGGGCCAGCTCCCTaGTCTAAAGTGCATCTCGGT +
Preference number: 4 (lower is better)
Translates to: RPGQLPGLKCISVPWSPRAGPAP*SKVHLG
Trigger: ACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGC...ACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAAGCCGGGCCAGCTCCCTaGTCTAAAGTGCATCTCGGT +
Preference number: 4 (lower is better)
Translates to: RASSGRRGSVCPSVHVGEAGPAP*SKVHLG
Trigger: ACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGC...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAAGGTGTGGTGCTGTCCTaGGACAGACTCTGCGGGTCT +
Preference number: 4 (lower is better)
Translates to: RASSGRRGSVCPSVHVGEGVVLS*DRLCGS
Trigger: AGACCCGCAGAGTCTGTCCCAGGACAGCACCACACC...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS-3UTR TCA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGCTTCGGGGAGTTTGCTaGACAGTTTCCGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLLRGVC*TVSGSP
Trigger: AGGACTTCCGGAAACTGTTCAGCAAACTCCCCGAAG...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp GGCTCGGGAAAGGTTGGGCGTGACATGGCCACGGCGCGAACCCACTGGGCTTGGCTTCGGGGAGTTTGCTaGACAGTTTCCGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: GSGKVGRDMATARTHWAWLRGVC*TVSGSP
Trigger: AGGACTTCCGGAAACTGTTCAGCAAACTCCCCGAAG...CCAAGCCCAGTGGGTTCGCGCCGTGGCCATGTCACGCCCAACCTTTCCCGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR TCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCGGGCCCCAAAGGAAGTaGAGAAATGCTTCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVGPQRK*RNASRS
Trigger: AGAGCGAGAAGCATTTCTTCACTTCCTTTGGGGCCC...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGGGCCCCAAAGGAAGTaGAGAAATGCTTCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCGPQRK*RNASRS
Trigger: AGAGCGAGAAGCATTTCTTCACTTCCTTTGGGGCCC...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTTCAGCGTCACGTCTGTaGACTTGCACTGCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCSASRL*TCTAVG
Trigger: TCCTACAGCAGTGCAAGTTCACAGACGTGACGCTGA...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACGGCCCAGTGGGTTGCTaGTGGGGATGGTGTACGTCA +
Preference number: 4 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHGPVGC*WGWCTS
Trigger: TGACGTACACCATCCCCATCAGCAACCCACTGGGCC...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCACGAGTTCTTCTCAATaGGCGACTTCACCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVTSSSQ*ATSPGS
Trigger: GGAGCCTGGTGAAGTCGCTCATTGAGAAGAACTCGT...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTACGAGTTCTTCTCAATaGGCGACTTCACCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCTSSSQ*ATSPGS
Trigger: GGAGCCTGGTGAAGTCGCTCATTGAGAAGAACTCGT...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAGAGGGTCTGAGACTGTaGTGCCTTGGTGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGEGLRL*CLGAAS
Trigger: AGAAGCTGCACCAAGGCATCACAGTCTCAGACCCTC...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCAGAGGGTCTGAGACTGTaGTGCCTTGGTGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPEGLRL*CLGAAS
Trigger: AGAAGCTGCACCAAGGCATCACAGTCTCAGACCCTC...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCGAGGGTCTGAGACTGTaGTGCCTTGGTGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVEGLRL*CLGAAS
Trigger: AGAAGCTGCACCAAGGCATCACAGTCTCAGACCCTC...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp GCCCAGTGGGTTGCTGATGGGGATGGTGTACGTCAGCACCCGGCGCTGGTGGCAGTCAAAGGGAGGGTCTaGGACTGTGATGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: AQWVADGDGVRQHPALVAVKGRV*DCDALV
Trigger: CACCAAGGCATCACAGTCTCAGACCCTCCCTTTGAC...TGCCACCAGCGCCGGGTGCTGACGTACACCATCCCCATCAGCAACCCACTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR GCA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAACCTTCTCCACCATGGTaGCTGGTTCTGGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: RASSGRRGSVCPSVHVGEPSPPW*LVLAQV
Trigger: CACCTGAGCCAGAACCAGGCACCATGGTGGAGAAGG...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTTCAAGCAGTGCATTCTaGCAGAGGCGGAAGATGAGG +
Preference number: 4 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCSSSAF*QRRKMR
Trigger: CCTCATCTTCCGCCTCTGGCAGAATGCACTGCTTGA...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTTCTGTGAACTTGCACTaGTGTAGGAAGCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCSVNLH*CRKPWR
Trigger: CCTCCAGGGCTTCCTACAGCAGTGCAAGTTCACAGA...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCTGTGAACTTGCACTaGTGTAGGAAGCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLSVNLH*CRKPWR
Trigger: CCTCCAGGGCTTCCTACAGCAGTGCAAGTTCACAGA...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp AGGCCGGGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGTGGAATTGCTTCTaGAGCGCCAGGATCTCGGCC +
Preference number: 4 (lower is better)
Translates to: RPGQLPGLKCISVPWSPRLWNCF*SARISA
Trigger: GGCCGAGATCCTGGCGCTGCAGAAGCAATTCCACAG...ACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGATCCACGCTGTGGAATTaGTTCTGCAGCGCCAGGATC +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGSTLWN*FCSARI
Trigger: GATCCTGGCGCTGCAGAAGCAATTCCACAGCGTGGA...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTATCTGCCTCCACTTGTaGACCTCCACGCTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCICLHL*TSTLWN
Trigger: ATTCCACAGCGTGGAGGTGCACAAGTGGAGGCAGAT...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCACTGTGATGCCTTGGTaGAGCTTCTCCAGCGAGAAC +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVTVMPW*SFSSEN
Trigger: GTTCTCGCTGGAGAAGCTGCACCAAGGCATCACAGT...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTACTGTGATGCCTTGGTaGAGCTTCTCCAGCGAGAAC +
Preference number: 4 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCTVMPW*SFSSEN
Trigger: GTTCTCGCTGGAGAAGCTGCACCAAGGCATCACAGT...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCTCCCTGGTCTAAAGTaGATCTCGGTTCCGTGGTCC +
Preference number: 4 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVLPGLK*ISVPWS
Trigger: GGACCACGGAACCGAGATGCACTTTAGACCAGGGAG...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCAATCCCTTCTCCACCATaGTGCCTGGTTCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPIPSPP*CLVLAQ
Trigger: CTGAGCCAGAACCAGGCACCATGGTGGAGAAGGGAT...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCATCCCTTCTCCACCATaGTGCCTGGTTCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVIPSPP*CLVLAQ
Trigger: CTGAGCCAGAACCAGGCACCATGGTGGAGAAGGGAT...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCAGCTGGATGGAGATCGTaGTCTCCCAGCGGAAGATGT +
Preference number: 4 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPAGWRS*SPSGRC
Trigger: ACATCTTCCGCTGGGAGACCACGATCTCCATCCAGC...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCACTTCCTTCAGCTaGATGGAGATCGTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCVTSFS*MEIVVS
Trigger: GGAGACCACGATCTCCATCCAGCTGAAGGAAGTGAC...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCGTCACTTCCTTCAGCTaGATGGAGATCGTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVVTSFS*MEIVVS
Trigger: GGAGACCACGATCTCCATCCAGCTGAAGGAAGTGAC...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAAGATCTGGATGGCGTTaGGGATCAGCTTGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGRSGWR*GSAWPS
Trigger: AGACGGCCAAGCTGATCCCCAACGCCATCCAGATCT...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp AGGCCGGGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCCGTGCAGATCTGGATaGCGTTGGGGATCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: RPGQLPGLKCISVPWSPRPCRSG*RWGSAW
Trigger: CCAAGCTGATCCCCAACGCCATCCAGATCTGCACGG...ACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAACATCTCCCACTTCCTTaGGGGTCCCCAGACCGTTCA +
Preference number: 4 (lower is better)
Translates to: RASSGRRGSVCPSVHVGEHLPLP*GSPDRS
Trigger: TGAACGGTCTGGGGACCCCCAAGGAAGTGGGAGATG...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCCGCTTCCTCCCCAGTaGATGAAGAGGAGTTACTTG +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVPLPPQ*MKRSYL
Trigger: CAAGTAACTCCTCTTCATCCACTGGGGAGGAAGCGG...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTCCGCTTCCTCCCCAGTaGATGAAGAGGAGTTACTTG +
Preference number: 4 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCPLPPQ*MKRSYL
Trigger: CAAGTAACTCCTCTTCATCCACTGGGGAGGAAGCGG...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTTGCTGTAGGAAGCCCTaGAGGAAGGGCGAGTCCGAG +
Preference number: 4 (lower is better)
Translates to: LTPCQQWPPRLCVSICPCCCRKP*RKGESE
Trigger: CTCGGACTCGCCCTTCCTCCAGGGCTTCCTACAGCA...ACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCAACAGCTTCTCAGCCTTaGCGAGCTCTCGCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPTASQP*RALAPD
Trigger: ATCTGGAGCGAGAGCTCGCCAAGGCTGAGAAGCTGT...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGCCCTGGTCCACAGATaGTTCGGAGAAGCGGGAGCT +
Preference number: 4 (lower is better)
Translates to: LTPCQQWPPRLCVSICPCALVHR*FGEAGA
Trigger: AGCTCCCGCTTCTCCGAACCATCTGTGGACCAGGGC...ACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCAGGACTCAAAGGTGTaGGCTGTCCTTTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVQDSKV*AVLSRD
Trigger: GTCCCTGGAAAGGACAGCCCACACCTTTGAGTCCTG...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp AGGCCGGGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTTGCACCTCCACGCTGTaGAATTGCTTCTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: RPGQLPGLKCISVPWSPRCTSTL*NCFCSA
Trigger: GGCGCTGCAGAAGCAATTCCACAGCGTGGAGGTGCA...ACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCGAGACTGTGATGCCTTaGTGCAGCTTCTCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVETVMP*CSFSSE
Trigger: CTCGCTGGAGAAGCTGCACCAAGGCATCACAGTCTC...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAGAGACTGTGATGCCTTaGTGCAGCTTCTCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGETVMP*CSFSSE
Trigger: CTCGCTGGAGAAGCTGCACCAAGGCATCACAGTCTC...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGGCCGGGCCAGCTCCCTaGTCTAAAGTGCATCTCGGT +
Preference number: 4 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWAGPAP*SKVHLG
Trigger: ACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGC...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGCTTCTGACCCTTTATTaGGGCACTGTCGGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLLLTLY*GTVGPK
Trigger: TTTGGGGCCGACAGTGCCCCAATAAAGGGTCAGAAG...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTCTTCTGACCCTTTATTaGGGCACTGTCGGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCLLTLY*GTVGPK
Trigger: TTTGGGGCCGACAGTGCCCCAATAAAGGGTCAGAAG...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTTCTGGAACAGCGGTGTaGTCTCTTATTGGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCSGTAV*SLIGSS
Trigger: GGAGGACCCAATAAGAGACCACACCGCTGTTCCAGA...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS-3UTR CCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAGCAGGACATCATCCATaGAGAGGGTCTGGAACAGCG +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGAGHHP*RGSGTA
Trigger: CGCTGTTCCAGACCCTCTCCATGGATGATGTCCTGC...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599564.5
3UTR CAA 72 bp AGGAGCTCCACGGAGGCCCGCAGGATCTGCCTCCACTaGTGCACCTCCACGCTGTGGAATTGCTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RSSTEARRICLH*CTSTLWNCFCS
Trigger: GCTGCAGAAGCAATTCCACAGCGTGGAGGTGCACAAGTGGAGGCAGATCCTGCGGGCCTCCGTGGAGCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR TCA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCAAGGAGTAATCCACAATaGGGCGTTCTGCTTCGGGGA +
Preference number: 4 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPRSNPQ*GVLLRG
Trigger: TCCCCGAAGCAGAACGCCTCATTGTGGATTACTCCT...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp GCCCAGTGGGTTGCTGATGGGGATGGTGTACGTCAGCACCCGGCGCTGGTGGCAAGGAGTAATCCACAATaGGGCGTTCTGCTTCGGGGA +
Preference number: 4 (lower is better)
Translates to: AQWVADGDGVRQHPALVARSNPQ*GVLLRG
Trigger: TCCCCGAAGCAGAACGCCTCATTGTGGATTACTCCT...TGCCACCAGCGCCGGGTGCTGACGTACACCATCCCCATCAGCAACCCACTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR TCA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTTCCTCCCCAGTGGATaGAGAGGAGTTACTTGTGTC +
Preference number: 4 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLFLPSG*RGVTCV
Trigger: GACACAAGTAACTCCTCTTCATCCACTGGGGAGGAA...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCTTCCTCCCCAGTGGATaGAGAGGAGTTACTTGTGTC +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVFLPSG*RGVTCV
Trigger: GACACAAGTAACTCCTCTTCATCCACTGGGGAGGAA...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATCAGCGTCACGTCTGTaGACTTGCACTGCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPSASRL*TCTAVG
Trigger: TCCTACAGCAGTGCAAGTTCACAGACGTGACGCTGA...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp AGGCCGGGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTGTCAAAGGGAGGGTCTaGGACTGTGATGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: RPGQLPGLKCISVPWSPRVKGRV*DCDALV
Trigger: CACCAAGGCATCACAGTCTCAGACCCTCCCTTTGAC...ACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACCCTTCTCCACCATGGTaGCTGGTTCTGGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHPSPPW*LVLAQV
Trigger: CACCTGAGCCAGAACCAGGCACCATGGTGGAGAAGG...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGCCTTCTCCACCATGGTaGCTGGTTCTGGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWPSPPW*LVLAQV
Trigger: CACCTGAGCCAGAACCAGGCACCATGGTGGAGAAGG...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTCACAATGAGGCGTTCTaGTTCGGGGAGTTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCHNEAF*FGEFAE
Trigger: TTCAGCAAACTCCCCGAAGCAGAACGCCTCATTGTG...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGGCTTCTCGCTCTCCGTaGAGATCTGGATGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWASRSP*RSGWRW
Trigger: CCAACGCCATCCAGATCTGCACGGAGAGCGAGAAGC...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGATCAAGCAGTGCATTCTaGCAGAGGCGGAAGATGAGG +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGSSSAF*QRRKMR
Trigger: CCTCATCTTCCGCCTCTGGCAGAATGCACTGCTTGA...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCTCAAGCAGTGCATTCTaGCAGAGGCGGAAGATGAGG +
Preference number: 4 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVSSSAF*QRRKMR
Trigger: CCTCATCTTCCGCCTCTGGCAGAATGCACTGCTTGA...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CTCTTGGGGCCCAGTGGGTTGCTGATGGGGATGGTGTACGTCAGCACCCGGCGCTCAAGCAGTGCATTCTaGCAGAGGCGGAAGATGAGG +
Preference number: 4 (lower is better)
Translates to: LLGPSGLLMGMVYVSTRRSSSAF*QRRKMR
Trigger: CCTCATCTTCCGCCTCTGGCAGAATGCACTGCTTGA...GCGCCGGGTGCTGACGTACACCATCCCCATCAGCAACCCACTGGGCCCCAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR GCA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACCTGTGGAATTGCTTCTaGAGCGCCAGGATCTCGGCC +
Preference number: 4 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHLWNCF*SARISA
Trigger: GGCCGAGATCCTGGCGCTGCAGAAGCAATTCCACAG...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp AGGCCGGGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTATCCCTTCTCCACCATaGTGCCTGGTTCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: RPGQLPGLKCISVPWSPRIPSPP*CLVLAQ
Trigger: CTGAGCCAGAACCAGGCACCATGGTGGAGAAGGGAT...ACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCAGTCACTTCCTTCAGCTaGATGGAGATCGTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPVTSFS*MEIVVS
Trigger: GGAGACCACGATCTCCATCCAGCTGAAGGAAGTGAC...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCGTCACTTCCTTCAGCTaGATGGAGATCGTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVVTSFS*MEIVVS
Trigger: GGAGACCACGATCTCCATCCAGCTGAAGGAAGTGAC...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp AGGCCGGGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTAGATCTGGATGGCGTTaGGGATCAGCTTGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: RPGQLPGLKCISVPWSPRRSGWR*GSAWPS
Trigger: AGACGGCCAAGCTGATCCCCAACGCCATCCAGATCT...ACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTCCGTGCAGATCTGGATaGCGTTGGGGATCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: LTPCQQWPPRLCVSICPCPCRSG*RWGSAW
Trigger: CCAAGCTGATCCCCAACGCCATCCAGATCTGCACGG...ACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGCTCTCCGTGCAGATCTaGATGGCGTTGGGGATCAGC +
Preference number: 4 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWLSVQI*MALGIS
Trigger: GCTGATCCCCAACGCCATCCAGATCTGCACGGAGAG...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACCATCTCCCACTTCCTTaGGGGTCCCCAGACCGTTCA +
Preference number: 4 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHHLPLP*GSPDRS
Trigger: TGAACGGTCTGGGGACCCCCAAGGAAGTGGGAGATG...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGACCGCTTCCTCCCCAGTaGATGAAGAGGAGTTACTTG +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGPLPPQ*MKRSYL
Trigger: CAAGTAACTCCTCTTCATCCACTGGGGAGGAAGCGG...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCACCGCTTCCTCCCCAGTaGATGAAGAGGAGTTACTTG +
Preference number: 4 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPPLPPQ*MKRSYL
Trigger: CAAGTAACTCCTCTTCATCCACTGGGGAGGAAGCGG...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAAACAGCTTCTCAGCCTTaGCGAGCTCTCGCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: RASSGRRGSVCPSVHVGETASQP*RALAPD
Trigger: ATCTGGAGCGAGAGCTCGCCAAGGCTGAGAAGCTGT...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAACAGGACTCAAAGGTGTaGGCTGTCCTTTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: RASSGRRGSVCPSVHVGEQDSKV*AVLSRD
Trigger: GTCCCTGGAAAGGACAGCCCACACCTTTGAGTCCTG...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CAAAGGTGTGGGCTGTCCTTTCCAGGGACCAGAGGCGGTAGAAGAGCAGGACGTCACTCTGTGGCCGTCTaGGGGAACTTGCCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: QRCGLSFPGTRGGRRAGRHSVAV*GNLPLA
Trigger: GGCCAAGGGCAAGTTCCCCCAGACGGCCACAGAGTG...ACGTCCTGCTCTTCTACCGCCTCTGGTCCCTGGAAAGGACAGCCCACACCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CCA 90 bp CTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTTGCACCTCCACGCTGTaGAATTGCTTCTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: LTPCQQWPPRLCVSICPCCTSTL*NCFCSA
Trigger: GGCGCTGCAGAAGCAATTCCACAGCGTGGAGGTGCA...ACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp AGGCCGGGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTTCGGGGAGTTTGCTaGACAGTTTCCGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: RPGQLPGLKCISVPWSPRLRGVC*TVSGSP
Trigger: AGGACTTCCGGAAACTGTTCAGCAAACTCCCCGAAG...ACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp AGGCCGGGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTAGGAGTAATCCACAATaGGGCGTTCTGCTTCGGGGA +
Preference number: 4 (lower is better)
Translates to: RPGQLPGLKCISVPWSPRRSNPQ*GVLLRG
Trigger: TCCCCGAAGCAGAACGCCTCATTGTGGATTACTCCT...ACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp AGGCCGGGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTGGGCCCCAAAGGAAGTaGAGAAATGCTTCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: RPGQLPGLKCISVPWSPRGPQRK*RNASRS
Trigger: AGAGCGAGAAGCATTTCTTCACTTCCTTTGGGGCCC...ACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGATTCCTCCCCAGTGGATaGAGAGGAGTTACTTGTGTC +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGFLPSG*RGVTCV
Trigger: GACACAAGTAACTCCTCTTCATCCACTGGGGAGGAA...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAAACGAGTTCTTCTCAATaGGCGACTTCACCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: RASSGRRGSVCPSVHVGETSSSQ*ATSPGS
Trigger: GGAGCCTGGTGAAGTCGCTCATTGAGAAGAACTCGT...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACGTCAAAGGGAGGGTCTaGGACTGTGATGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHVKGRV*DCDALV
Trigger: CACCAAGGCATCACAGTCTCAGACCCTCCCTTTGAC...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTATACTGTACCAGCTCTaGATCTTCTTGCTGTTGCGG +
Preference number: 4 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCILYQL*IFLLLR
Trigger: CCGCAACAGCAAGAAGATGCAGAGCTGGTACAGTAT...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp TCATCTCATCCAGGAGCTCCACGGAGGCCCGCAGGATCTGCCTCCACTTGTGCAGCTTCTCGCTCTCCGTaGAGATCTGGATGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: SSHPGAPRRPAGSASTCAASRSP*RSGWRW
Trigger: CCAACGCCATCCAGATCTGCACGGAGAGCGAGAAGC...TGCACAAGTGGAGGCAGATCCTGCGGGCCTCCGTGGAGCTCCTGGATGAGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR GCA 90 bp GAAGGGCGAGTCCGAGAAGAGCATCTGCTGGAGCCGCTCAGCGCCCACATGGAATCCACGCTGTGGAATTaGTTCTGCAGCGCCAGGATC +
Preference number: 4 (lower is better)
Translates to: EGRVREEHLLEPLSAHMESTLWN*FCSARI
Trigger: GATCCTGGCGCTGCAGAAGCAATTCCACAGCGTGGA...TTCCATGTGGGCGCTGAGCGGCTCCAGCAGATGCTCTTCTCGGACTCGCCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR GCA 90 bp AGGCCGGGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTATCTGCCTCCACTTGTaGACCTCCACGCTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: RPGQLPGLKCISVPWSPRICLHL*TSTLWN
Trigger: ATTCCACAGCGTGGAGGTGCACAAGTGGAGGCAGAT...ACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGCTCCCTGGTCTAAAGTaGATCTCGGTTCCGTGGTCC +
Preference number: 4 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWLPGLK*ISVPWS
Trigger: GGACCACGGAACCGAGATGCACTTTAGACCAGGGAG...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTATCCCTTCTCCACCATaGTGCCTGGTTCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: LTPCQQWPPRLCVSICPCIPSPP*CLVLAQ
Trigger: CTGAGCCAGAACCAGGCACCATGGTGGAGAAGGGAT...ACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCTACGCTGCTTATAAGTaGGGCTCAGCATACTGTACC +
Preference number: 4 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVYAAYK*GSAYCT
Trigger: GGTACAGTATGCTGAGCCCCACTTATAAGCAGCGTA...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACGCTGGATGGAGATCGTaGTCTCCCAGCGGAAGATGT +
Preference number: 4 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHAGWRS*SPSGRC
Trigger: ACATCTTCCGCTGGGAGACCACGATCTCCATCCAGC...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGGCTGGATGGAGATCGTaGTCTCCCAGCGGAAGATGT +
Preference number: 4 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWAGWRS*SPSGRC
Trigger: ACATCTTCCGCTGGGAGACCACGATCTCCATCCAGC...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGCTTCCTTCAGCTGGATaGAGATCGTGGTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWLPSAG*RSWSPS
Trigger: GCTGGGAGACCACGATCTCCATCCAGCTGAAGGAAG...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACTCAATAGCTCCTCACTaGGCAGCAGATCCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHSIAPH*AADPRG
Trigger: GCCCCTTGGATCTGCTGCCCAGTGAGGAGCTATTGA...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGTCAATAGCTCCTCACTaGGCAGCAGATCCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWSIAPH*AADPRG
Trigger: GCCCCTTGGATCTGCTGCCCAGTGAGGAGCTATTGA...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTACAGCTTCTCAGCCTTaGCGAGCTCTCGCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: LTPCQQWPPRLCVSICPCTASQP*RALAPD
Trigger: ATCTGGAGCGAGAGCTCGCCAAGGCTGAGAAGCTGT...ACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGACAGCTTCTCAGCCTTaGCGAGCTCTCGCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWTASQP*RALAPD
Trigger: ATCTGGAGCGAGAGCTCGCCAAGGCTGAGAAGCTGT...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GAGACAGCTTCTCAGCCTTGGCGAGCTCTCGCTCCAGATGGTGGAAATAGTCTTACAGGGGTCAGGATCTaGGTGCTGGGGCCCGTCCCC +
Preference number: 4 (lower is better)
Translates to: ETASQPWRALAPDGGNSLTGVRI*VLGPVP
Trigger: GGGGACGGGCCCCAGCACCCAGATCCTGACCCCTGT...AAGACTATTTCCACCATCTGGAGCGAGAGCTCGCCAAGGCTGAGAAGCTGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGCAGGACTCAAAGGTGTaGGCTGTCCTTTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWQDSKV*AVLSRD
Trigger: GTCCCTGGAAAGGACAGCCCACACCTTTGAGTCCTG...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACCAGGACTCAAAGGTGTaGGCTGTCCTTTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHQDSKV*AVLSRD
Trigger: GTCCCTGGAAAGGACAGCCCACACCTTTGAGTCCTG...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGGAGACTGTGATGCCTTaGTGCAGCTTCTCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWETVMP*CSFSSE
Trigger: CTCGCTGGAGAAGCTGCACCAAGGCATCACAGTCTC...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAACTTCTGACCCTTTATTaGGGCACTGTCGGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: RASSGRRGSVCPSVHVGELLTLY*GTVGPK
Trigger: TTTGGGGCCGACAGTGCCCCAATAAAGGGTCAGAAG...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGCTTCGGGGAGTTTGCTaGACAGTTTCCGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWLRGVC*TVSGSP
Trigger: AGGACTTCCGGAAACTGTTCAGCAAACTCCCCGAAG...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp CTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTAGGAGTAATCCACAATaGGGCGTTCTGCTTCGGGGA +
Preference number: 4 (lower is better)
Translates to: LTPCQQWPPRLCVSICPCRSNPQ*GVLLRG
Trigger: TCCCCGAAGCAGAACGCCTCATTGTGGATTACTCCT...ACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACGGGCCCCAAAGGAAGTaGAGAAATGCTTCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHGPQRK*RNASRS
Trigger: AGAGCGAGAAGCATTTCTTCACTTCCTTTGGGGCCC...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR TCA 90 bp CCTCCACGCTGTGGAATTGCTTCTGCAGCGCCAGGATCTCGGCCCACTCTGTGGGGGCCCCAAAGGAAGTaGAGAAATGCTTCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: PPRCGIASAAPGSRPTLWGPQRK*RNASRS
Trigger: AGAGCGAGAAGCATTTCTTCACTTCCTTTGGGGCCC...CCACAGAGTGGGCCGAGATCCTGGCGCTGCAGAAGCAATTCCACAGCGTGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR GCA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCAATACTGTACCAGCTCTaGATCTTCTTGCTGTTGCGG +
Preference number: 4 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPILYQL*IFLLLR
Trigger: CCGCAACAGCAAGAAGATGCAGAGCTGGTACAGTAT...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAATACTGTACCAGCTCTaGATCTTCTTGCTGTTGCGG +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGILYQL*IFLLLR
Trigger: CCGCAACAGCAAGAAGATGCAGAGCTGGTACAGTAT...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAACACAATGAGGCGTTCTaGTTCGGGGAGTTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: RASSGRRGSVCPSVHVGEHNEAF*FGEFAE
Trigger: TTCAGCAAACTCCCCGAAGCAGAACGCCTCATTGTG...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTTCAAGCAGTGCATTCTaGCAGAGGCGGAAGATGAGG +
Preference number: 4 (lower is better)
Translates to: LTPCQQWPPRLCVSICPCSSSAF*QRRKMR
Trigger: CCTCATCTTCCGCCTCTGGCAGAATGCACTGCTTGA...ACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTTCTGTGAACTTGCACTaGTGTAGGAAGCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LTPCQQWPPRLCVSICPCSVNLH*CRKPWR
Trigger: CCTCCAGGGCTTCCTACAGCAGTGCAAGTTCACAGA...ACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGGGAAATAGTCTTCAATaGCGCTCCACGAGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLGNSLQ*RSTSSS
Trigger: AGAAGAACTCGTGGAGCGGCATTGAAGACTATTTCC...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGACTGTGATGCCTTGGTaGAGCTTCTCCAGCGAGAAC +
Preference number: 4 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWTVMPW*SFSSEN
Trigger: GTTCTCGCTGGAGAAGCTGCACCAAGGCATCACAGT...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp AGACAGCTTCTCAGCCTTGGCGAGCTCTCGCTCCAGATGGTGGAAATAGTCTTCGTCAGCACCCGGCGCTaGTGGCACTTGCTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: RQLLSLGELSLQMVEIVFVSTRR*WHLLSP
Trigger: TGGGGACAGCAAGTGCCACCAGCGCCGGGTGCTGAC...GAAGACTATTTCCACCATCTGGAGCGAGAGCTCGCCAAGGCTGAGAAGCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CCA 90 bp GAAGGGCGAGTCCGAGAAGAGCATCTGCTGGAGCCGCTCAGCGCCCACATGGAACTTCTGACCCTTTATTaGGGCACTGTCGGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: EGRVREEHLLEPLSAHMELLTLY*GTVGPK
Trigger: TTTGGGGCCGACAGTGCCCCAATAAAGGGTCAGAAG...TTCCATGTGGGCGCTGAGCGGCTCCAGCAGATGCTCTTCTCGGACTCGCCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGATACGCTGCTTATAAGTaGGGCTCAGCATCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGYAAYK*GSASCC
Trigger: ACAGCAAGATGCTGAGCCCCACTTATAAGCAGCGTA...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411896.6
CDS-3UTR CCA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAACTCCCCATCACTGGATaGCGTTATGTGAATGATGGG +
Preference number: 4 (lower is better)
Translates to: RASSGRRGSVCPSVHVGELPITG*RYVNDG
Trigger: CCCATCATTCACATAACGCCATCCAGTGATGGGGAG...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS-3UTR CCA 90 bp TGGAGCCGCTCAGCGCCCACATGGAAGACAGAGTTGATGAGGAGGCGGCCGGAGCATCTCCCACTTCCTTaGGGGTCCTTTTCAAGCAGT +
Preference number: 4 (lower is better)
Translates to: WSRSAPTWKTELMRRRPEHLPLP*GSFSSS
Trigger: ACTGCTTGAAAAGGACCCCCAAGGAAGTGGGAGATG...CTCCGGCCGCCTCCTCATCAACTCTGTCTTCCATGTGGGCGCTGAGCGGCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR TCA 90 bp GTGTCTGTCAATAGCTCCTCACTGGGCAGCAGATCCAAGGGGCCCAGGGTGGTGTCAGCGTCACGTCTGTaGACTTGCACTGCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: VSVNSSSLGSRSKGPRVVSASRL*TCTAVG
Trigger: TCCTACAGCAGTGCAAGTTCACAGACGTGACGCTGA...CACCACCCTGGGCCCCTTGGATCTGCTGCCCAGTGAGGAGCTATTGACAGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR GCA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACCACAATGAGGCGTTCTaGTTCGGGGAGTTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHHNEAF*FGEFAE
Trigger: TTCAGCAAACTCCCCGAAGCAGAACGCCTCATTGTG...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAGGAAATAGTCTTCAATaGCGCTCCACGAGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGGNSLQ*RSTSSS
Trigger: AGAAGAACTCGTGGAGCGGCATTGAAGACTATTTCC...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCGGAAATAGTCTTCAATaGCGCTCCACGAGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVGNSLQ*RSTSSS
Trigger: AGAAGAACTCGTGGAGCGGCATTGAAGACTATTTCC...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp CTCTTGGGGCCCAGTGGGTTGCTGATGGGGATGGTGTACGTCAGCACCCGGCGCGGAAATAGTCTTCAATaGCGCTCCACGAGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LLGPSGLLMGMVYVSTRRGNSLQ*RSTSSS
Trigger: AGAAGAACTCGTGGAGCGGCATTGAAGACTATTTCC...GCGCCGGGTGCTGACGTACACCATCCCCATCAGCAACCCACTGGGCCCCAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CCA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAATACGCTGCTTATAAGTaGGGCTCAGCATACTGTACC +
Preference number: 4 (lower is better)
Translates to: RASSGRRGSVCPSVHVGEYAAYK*GSAYCT
Trigger: GGTACAGTATGCTGAGCCCCACTTATAAGCAGCGTA...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp AGGCCGGGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTTACGCTGCTTATAAGTaGGGCTCAGCATACTGTACC +
Preference number: 4 (lower is better)
Translates to: RPGQLPGLKCISVPWSPRYAAYK*GSAYCT
Trigger: GGTACAGTATGCTGAGCCCCACTTATAAGCAGCGTA...ACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CCA 90 bp CAAAGGTGTGGGCTGTCCTTTCCAGGGACCAGAGGCGGTAGAAGAGCAGGACGTCAGGACTCAAAGGTGTaGGCTGTCCTTTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: QRCGLSFPGTRGGRRAGRQDSKV*AVLSRD
Trigger: GTCCCTGGAAAGGACAGCCCACACCTTTGAGTCCTG...ACGTCCTGCTCTTCTACCGCCTCTGGTCCCTGGAAAGGACAGCCCACACCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CCA 90 bp TTTACTATTTCTGCTGTTCCTGAGCAGCTGTGTGAGGTAACAGGTTGCAGGGAAGAGCGGGGGACCGCGTaGTCCCGTCACCGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: FTISAVPEQLCEVTGCREERGTA*SRHRVL
Trigger: GAGGACCCGGTGACGGGACCACGCGGTCCCCCGCTC...TTCCCTGCAACCTGTTACCTCACACAGCTGCTCAGGAACAGCAGAAATAGTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424536.2
CDS-3UTR GCA 90 bp CTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTATACTGTACCAGCTCTaGATCTTCTTGCTGTTGCGG +
Preference number: 4 (lower is better)
Translates to: LTPCQQWPPRLCVSICPCILYQL*IFLLLR
Trigger: CCGCAACAGCAAGAAGATGCAGAGCTGGTACAGTAT...ACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR GCA 90 bp AGGTTGCAGGGAAAGAGAGGAGAGGCTGGTGCGGGGATCAGGTCAGGGGTGATGCACAATGAGGCGTTCTaGTTCGGGGAGTTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: RLQGKRGEAGAGIRSGVMHNEAF*FGEFAE
Trigger: TTCAGCAAACTCCCCGAAGCAGAACGCCTCATTGTG...CATCACCCCTGACCTGATCCCCGCACCAGCCTCTCCTCTCTTTCCCTGCAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424536.2
CDS-3UTR CCA 90 bp TTTACTATTTCTGCTGTTCCTGAGCAGCTGTGTGAGGTAACAGGTTGCAGGGAACGGCTGCCTAGGCTCTaGGTGCTGGGGGTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: FTISAVPEQLCEVTGCRERLPRL*VLGVPG
Trigger: GCCTGGGACCCCCAGCACCCAGAGCCTAGGCAGCCG...TTCCCTGCAACCTGTTACCTCACACAGCTGCTCAGGAACAGCAGAAATAGTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424536.2
CDS-3UTR CCA 90 bp GAGAAGAGCATCTGCTGGAGCCGCTCAGCGCCCACATGGAAGACAGAGTTGATGCTTCCTTCAGCTGGATaGAGATCGTGGTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: EKSICWSRSAPTWKTELMLPSAG*RSWSPS
Trigger: GCTGGGAGACCACGATCTCCATCCAGCTGAAGGAAG...CATCAACTCTGTCTTCCATGTGGGCGCTGAGCGGCTCCAGCAGATGCTCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CCA 90 bp GCCACTTCTGACCCTTTATTGGGGCACTGTCGGCCCCAAATAAATATAATACATCCAAGGGGCCCAGGGTaGTGGGCCCGTCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ATSDPLLGHCRPQINIIHPRGPG*WARQAG
Trigger: CCCAGCCTGACGGGCCCACCACCCTGGGCCCCTTGG...ATGTATTATATTTATTTGGGGCCGACAGTGCCCCAATAAAGGGTCAGAAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS-3UTR CCA 90 bp GAGAAGAGCATCTGCTGGAGCCGCTCAGCGCCCACATGGAAGACAGAGTTGATGACAGCTTCTCAGCCTTaGCGAGCTCTCGCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: EKSICWSRSAPTWKTELMTASQP*RALAPD
Trigger: ATCTGGAGCGAGAGCTCGCCAAGGCTGAGAAGCTGT...CATCAACTCTGTCTTCCATGTGGGCGCTGAGCGGCTCCAGCAGATGCTCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR GCA 90 bp GCCACTTCTGACCCTTTATTGGGGCACTGTCGGCCCCAAATAAATATAATACATGGGTCTGGCATCCTCTaGTGCTGCCGGCGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: ATSDPLLGHCRPQINIIHGSGIL*CCRRRG
Trigger: CCCCCGACGCCGGCAGCAGCAGAGGATGCCAGACCC...ATGTATTATATTTATTTGGGGCCGACAGTGCCCCAATAAAGGGTCAGAAGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS-3UTR CCA 90 bp TTTACTATTTCTGCTGTTCCTGAGCAGCTGTGTGAGGTAACAGGTTGCAGGGAATGGTTCTGGCTCAGGTaGGGGCCGGCTTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: FTISAVPEQLCEVTGCREWFWLR*GPAWGQ
Trigger: CTGCCCCCAAGCCGGCCCCCACCTGAGCCAGAACCA...TTCCCTGCAACCTGTTACCTCACACAGCTGCTCAGGAACAGCAGAAATAGTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424536.2
CDS-3UTR CCA 90 bp AGTTTTACTATTTCTGCTGTTCCTGAGCAGCTGTGTGAGGTAACAGGTTGCAGGCTAGGCTCTGGGTGCTaGGGGTCCCAGGCACCCCAC +
Preference number: 4 (lower is better)
Translates to: SFTISAVPEQLCEVTGCRLGSGC*GSQAPH
Trigger: GTGGGGTGCCTGGGACCCCCAGCACCCAGAGCCTAG...CCTGCAACCTGTTACCTCACACAGCTGCTCAGGAACAGCAGAAATAGTAAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424536.2
CDS-3UTR CCA 90 bp GAGAAGAGCATCTGCTGGAGCCGCTCAGCGCCCACATGGAAGACAGAGTTGATGCCGCTTCCTCCCCAGTaGATGAAGAGGAGTTACTTG +
Preference number: 4 (lower is better)
Translates to: EKSICWSRSAPTWKTELMPLPPQ*MKRSYL
Trigger: CAAGTAACTCCTCTTCATCCACTGGGGAGGAAGCGG...CATCAACTCTGTCTTCCATGTGGGCGCTGAGCGGCTCCAGCAGATGCTCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR TCA 90 bp GAGACAGCTTCTCAGCCTTGGCGAGCTCTCGCTCCAGATGGTGGAAATAGTCTTGAGGGTCTGAGACTGTaGTGCCTTGGTGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: ETASQPWRALAPDGGNSLEGLRL*CLGAAS
Trigger: AGAAGCTGCACCAAGGCATCACAGTCTCAGACCCTC...AAGACTATTTCCACCATCTGGAGCGAGAGCTCGCCAAGGCTGAGAAGCTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR GCA 90 bp GTGCCACATACATGGAAGAGTTTTACTATTTCTGCTGTTCCTGAGCAGCTGTGTGGAGCGATGGGGAGCTaGTTGGCGTGCTCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: VPHTWKSFTISAVPEQLCGAMGS*LACSGQ
Trigger: CTGGCCGGAGCACGCCAAGCAGCTCCCCATCGCTCC...ACACAGCTGCTCAGGAACAGCAGAAATAGTAAAACTCTTCCATGTATGTGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424536.2
CDS-3UTR GCA 90 bp GCCACTTCTGACCCTTTATTGGGGCACTGTCGGCCCCAAATAAATATAATACATGGAGCGATGGGGAGCTaGTTGGCGTGCTCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: ATSDPLLGHCRPQINIIHGAMGS*LACSGQ
Trigger: CTGGCCGGAGCACGCCAAGCAGCTCCCCATCGCTCC...ATGTATTATATTTATTTGGGGCCGACAGTGCCCCAATAAAGGGTCAGAAGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS-3UTR CCA 90 bp TTTACTATTTCTGCTGTTCCTGAGCAGCTGTGTGAGGTAACAGGTTGCAGGGAAGTGTGGTGTCGAACATaGATGCGGCGCGGTGGGCGC +
Preference number: 4 (lower is better)
Translates to: FTISAVPEQLCEVTGCREVWCRT*MRRGGR
Trigger: GCGCCCACCGCGCCGCATCCATGTTCGACACCACAC...TTCCCTGCAACCTGTTACCTCACACAGCTGCTCAGGAACAGCAGAAATAGTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424536.2
CDS-3UTR CCA 90 bp AGTTTTACTATTTCTGCTGTTCCTGAGCAGCTGTGTGAGGTAACAGGTTGCAGGCGATGGGGAGCTGCTTaGCGTGCTCCGGCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: SFTISAVPEQLCEVTGCRRWGAA*RAPARV
Trigger: CACTCTGGCCGGAGCACGCCAAGCAGCTCCCCATCG...CCTGCAACCTGTTACCTCACACAGCTGCTCAGGAACAGCAGAAATAGTAAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424536.2
CDS-3UTR CCA 90 bp GAGACAGCTTCTCAGCCTTGGCGAGCTCTCGCTCCAGATGGTGGAAATAGTCTTGCTGGATGGAGATCGTaGTCTCCCAGCGGAAGATGT +
Preference number: 4 (lower is better)
Translates to: ETASQPWRALAPDGGNSLAGWRS*SPSGRC
Trigger: ACATCTTCCGCTGGGAGACCACGATCTCCATCCAGC...AAGACTATTTCCACCATCTGGAGCGAGAGCTCGCCAAGGCTGAGAAGCTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR TCA 90 bp AGACAGCTTCTCAGCCTTGGCGAGCTCTCGCTCCAGATGGTGGAAATAGTCTTCACGAGTTCTTCTCAATaGGCGACTTCACCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: RQLLSLGELSLQMVEIVFTSSSQ*ATSPGS
Trigger: GGAGCCTGGTGAAGTCGCTCATTGAGAAGAACTCGT...GAAGACTATTTCCACCATCTGGAGCGAGAGCTCGCCAAGGCTGAGAAGCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR GCA 90 bp AGTTTTACTATTTCTGCTGTTCCTGAGCAGCTGTGTGAGGTAACAGGTTGCAGGCTTGGGGGCAGGAGCTaGAGCCGTTTCCGGAGCGAT +
Preference number: 4 (lower is better)
Translates to: SFTISAVPEQLCEVTGCRLGGRS*SRFRSD
Trigger: ATCGCTCCGGAAACGGCTGCAGCTCCTGCCCCCAAG...CCTGCAACCTGTTACCTCACACAGCTGCTCAGGAACAGCAGAAATAGTAAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424536.2
CDS-3UTR GCA 90 bp GAGACAGCTTCTCAGCCTTGGCGAGCTCTCGCTCCAGATGGTGGAAATAGTCTTATCTGCCTCCACTTGTaGACCTCCACGCTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: ETASQPWRALAPDGGNSLICLHL*TSTLWN
Trigger: ATTCCACAGCGTGGAGGTGCACAAGTGGAGGCAGAT...AAGACTATTTCCACCATCTGGAGCGAGAGCTCGCCAAGGCTGAGAAGCTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR GCA 90 bp ATTTCTGCTGTTCCTGAGCAGCTGTGTGAGGTAACAGGTTGCAGGGAAAGAGAGCCTTCTCGCTCTCCGTaGAGATCTGGATGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: ISAVPEQLCEVTGCREREPSRSP*RSGWRW
Trigger: CCAACGCCATCCAGATCTGCACGGAGAGCGAGAAGG...CTCTCTTTCCCTGCAACCTGTTACCTCACACAGCTGCTCAGGAACAGCAGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424536.2
CDS-3UTR GCA 90 bp GCCACTTCTGACCCTTTATTGGGGCACTGTCGGCCCCAAATAAATATAATACATGCGAGCCCTGGGGACTaGCCTGTGCCAACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: ATSDPLLGHCRPQINIIHASPGD*PVPTGS
Trigger: AGACCCTGTTGGCACAGGGCAGTCCCCAGGGCTCGC...ATGTATTATATTTATTTGGGGCCGACAGTGCCCCAATAAAGGGTCAGAAGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS-3UTR CCA 90 bp TTTACTATTTCTGCTGTTCCTGAGCAGCTGTGTGAGGTAACAGGTTGCAGGGAACCGTTTCCGGAGCGATaGGGAGCTGCTTGGCGTGCT +
Preference number: 4 (lower is better)
Translates to: FTISAVPEQLCEVTGCREPFPER*GAAWRA
Trigger: AGCACGCCAAGCAGCTCCCCATCGCTCCGGAAACGG...TTCCCTGCAACCTGTTACCTCACACAGCTGCTCAGGAACAGCAGAAATAGTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424536.2
CDS-3UTR CCA 90 bp GTGCCACATACATGGAAGAGTTTTACTATTTCTGCTGTTCCTGAGCAGCTGTGTCATGGTGCCTGGTTCTaGCTCAGGTGGGGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: VPHTWKSFTISAVPEQLCHGAWF*LRWGPA
Trigger: AGCCGGCCCCCACCTGAGCCAGAACCAGGCACCATG...ACACAGCTGCTCAGGAACAGCAGAAATAGTAAAACTCTTCCATGTATGTGGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424536.2
CDS-3UTR CCA 90 bp AGTTTTACTATTTCTGCTGTTCCTGAGCAGCTGTGTGAGGTAACAGGTTGCAGGCTCCACCATGGTGCCTaGTTCTGGCTCAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SFTISAVPEQLCEVTGCRLHHGA*FWLRWG
Trigger: CCCCCACCTGAGCCAGAACCAGGCACCATGGTGGAG...CCTGCAACCTGTTACCTCACACAGCTGCTCAGGAACAGCAGAAATAGTAAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424536.2
CDS-3UTR CCA 90 bp GCCACTTCTGACCCTTTATTGGGGCACTGTCGGCCCCAAATAAATATAATACATACCGGGGTCACTGTCTaGCTGGAGGAGGCGTCTGGC +
Preference number: 4 (lower is better)
Translates to: ATSDPLLGHCRPQINIIHTGVTV*LEEASG
Trigger: GCCAGACGCCTCCTCCAGCCAGACAGTGACCCCGGT...ATGTATTATATTTATTTGGGGCCGACAGTGCCCCAATAAAGGGTCAGAAGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS-3UTR CCA 90 bp AGTTTTACTATTTCTGCTGTTCCTGAGCAGCTGTGTGAGGTAACAGGTTGCAGGGGGGCTTTGCATGTTTaGGGGAGGCGGCCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: SFTISAVPEQLCEVTGCRGALHV*GRRPAE
Trigger: CTCAGCAGGCCGCCTCCCCCAAACATGCAAAGCCCC...CCTGCAACCTGTTACCTCACACAGCTGCTCAGGAACAGCAGAAATAGTAAAACT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000424536.2
CDS-3UTR TCA 90 bp GCCACTTCTGACCCTTTATTGGGGCACTGTCGGCCCCAAATAAATATAATACATGCCAGAGGCGGAAGATaGGGAGGAAGCAGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: ATSDPLLGHCRPQINIIHARGGR*GGSSGH
Trigger: GTGACCGCTGCTTCCTCCTCATCTTCCGCCTCTGGC...ATGTATTATATTTATTTGGGGCCGACAGTGCCCCAATAAAGGGTCAGAAGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS-3UTR TCA 90 bp GCCACTTCTGACCCTTTATTGGGGCACTGTCGGCCCCAAATAAATATAATACATCCTCATCCTCACTGGTaGGGCCCAGCTCTGAGCCGT +
Preference number: 4 (lower is better)
Translates to: ATSDPLLGHCRPQINIIHPHPHW*GPALSR
Trigger: ACGGCTCAGAGCTGGGCCTCACCAGTGAGGATGAGG...ATGTATTATATTTATTTGGGGCCGACAGTGCCCCAATAAAGGGTCAGAAGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS-3UTR GCA 90 bp GCCACTTCTGACCCTTTATTGGGGCACTGTCGGCCCCAAATAAATATAATACATCTTGGGGGCAGGAGCTaGAGCCGTTTCCGGAGCGAT +
Preference number: 4 (lower is better)
Translates to: ATSDPLLGHCRPQINIIHLGGRS*SRFRSD
Trigger: ATCGCTCCGGAAACGGCTGCAGCTCCTGCCCCCAAG...ATGTATTATATTTATTTGGGGCCGACAGTGCCCCAATAAAGGGTCAGAAGTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS-3UTR CCA 90 bp ATTTCTGCTGTTCCTGAGCAGCTGTGTGAGGTAACAGGTTGCAGGGAAAGAGAGCTTCCTTCAGCTGGATaGAGATCGTGGTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: ISAVPEQLCEVTGCRERELPSAG*RSWSPS
Trigger: GCTGGGAGACCACGATCTCCATCCAGCTGAAGGAAG...CTCTCTTTCCCTGCAACCTGTTACCTCACACAGCTGCTCAGGAACAGCAGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424536.2
CDS-3UTR TCA 90 bp ATTTCTGCTGTTCCTGAGCAGCTGTGTGAGGTAACAGGTTGCAGGGAAAGAGAGAGGAGTAATCCACAATaGGGCGTTCTGCTTCGGGGA +
Preference number: 4 (lower is better)
Translates to: ISAVPEQLCEVTGCRERERSNPQ*GVLLRG
Trigger: TCCCCGAAGCAGAACGCCTCATTGTGGATTACTCCT...CTCTCTTTCCCTGCAACCTGTTACCTCACACAGCTGCTCAGGAACAGCAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424536.2
CDS-3UTR GCA 90 bp AGTTTTACTATTTCTGCTGTTCCTGAGCAGCTGTGTGAGGTAACAGGTTGCAGGCCTTCTCCACCATGGTaGCTGGTTCTGGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: SFTISAVPEQLCEVTGCRPSPPW*LVLAQV
Trigger: CACCTGAGCCAGAACCAGGCACCATGGTGGAGAAGG...CCTGCAACCTGTTACCTCACACAGCTGCTCAGGAACAGCAGAAATAGTAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424536.2
CDS-3UTR CCA 90 bp TTTACTATTTCTGCTGTTCCTGAGCAGCTGTGTGAGGTAACAGGTTGCAGGGAACCGTGCAGATCTGGATaGCGTTGGGGATCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: FTISAVPEQLCEVTGCREPCRSG*RWGSAW
Trigger: CCAAGCTGATCCCCAACGCCATCCAGATCTGCACGG...TTCCCTGCAACCTGTTACCTCACACAGCTGCTCAGGAACAGCAGAAATAGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424536.2
CDS-3UTR CCA 90 bp TTTACTATTTCTGCTGTTCCTGAGCAGCTGTGTGAGGTAACAGGTTGCAGGGAACTCTCCGTGCAGATCTaGATGGCGTTGGGGATCAGC +
Preference number: 4 (lower is better)
Translates to: FTISAVPEQLCEVTGCRELSVQI*MALGIS
Trigger: GCTGATCCCCAACGCCATCCAGATCTGCACGGAGAG...TTCCCTGCAACCTGTTACCTCACACAGCTGCTCAGGAACAGCAGAAATAGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424536.2
CDS-3UTR CCA 90 bp GCCACTTCTGACCCTTTATTGGGGCACTGTCGGCCCCAAATAAATATAATACATGAGAAGAGCATCTGCTaGAGCCGCTCAGCGCCCACA +
Preference number: 4 (lower is better)
Translates to: ATSDPLLGHCRPQINIIHEKSIC*SRSAPT
Trigger: TGTGGGCGCTGAGCGGCTCCAGCAGATGCTCTTCTC...ATGTATTATATTTATTTGGGGCCGACAGTGCCCCAATAAAGGGTCAGAAGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS-3UTR CCA 90 bp GCCACTTCTGACCCTTTATTGGGGCACTGTCGGCCCCAAATAAATATAATACATGCCCTGGTCCACAGATaGTTCGGAGAAGCGGGAGCT +
Preference number: 4 (lower is better)
Translates to: ATSDPLLGHCRPQINIIHALVHR*FGEAGA
Trigger: AGCTCCCGCTTCTCCGAACCATCTGTGGACCAGGGC...ATGTATTATATTTATTTGGGGCCGACAGTGCCCCAATAAAGGGTCAGAAGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS-3UTR CCA 90 bp GCCACTTCTGACCCTTTATTGGGGCACTGTCGGCCCCAAATAAATATAATACATTGCATCTCGGTTCCGTaGTCCCCACGTCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: ATSDPLLGHCRPQINIIHCISVP*SPRLHS
Trigger: GCTGTGCAGACGTGGGGACCACGGAACCGAGATGCA...ATGTATTATATTTATTTGGGGCCGACAGTGCCCCAATAAAGGGTCAGAAGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS-3UTR CCA 90 bp TTTACTATTTCTGCTGTTCCTGAGCAGCTGTGTGAGGTAACAGGTTGCAGGGAAATCCCTTCTCCACCATaGTGCCTGGTTCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: FTISAVPEQLCEVTGCREIPSPP*CLVLAQ
Trigger: CTGAGCCAGAACCAGGCACCATGGTGGAGAAGGGAT...TTCCCTGCAACCTGTTACCTCACACAGCTGCTCAGGAACAGCAGAAATAGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424536.2
CDS-3UTR CCA 90 bp TTTACTATTTCTGCTGTTCCTGAGCAGCTGTGTGAGGTAACAGGTTGCAGGGAAGCTGGATGGAGATCGTaGTCTCCCAGCGGAAGATGT +
Preference number: 4 (lower is better)
Translates to: FTISAVPEQLCEVTGCREAGWRS*SPSGRC
Trigger: ACATCTTCCGCTGGGAGACCACGATCTCCATCCAGC...TTCCCTGCAACCTGTTACCTCACACAGCTGCTCAGGAACAGCAGAAATAGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424536.2
CDS-3UTR CCA 90 bp TTTACTATTTCTGCTGTTCCTGAGCAGCTGTGTGAGGTAACAGGTTGCAGGGAAAGATCTGGATGGCGTTaGGGATCAGCTTGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: FTISAVPEQLCEVTGCRERSGWR*GSAWPS
Trigger: AGACGGCCAAGCTGATCCCCAACGCCATCCAGATCT...TTCCCTGCAACCTGTTACCTCACACAGCTGCTCAGGAACAGCAGAAATAGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424536.2
CDS-3UTR CCA 90 bp ATTTCTGCTGTTCCTGAGCAGCTGTGTGAGGTAACAGGTTGCAGGGAAAGAGAGTACGCTGCTTATAAGTaGGGCTCAGCATACTGTACC +
Preference number: 4 (lower is better)
Translates to: ISAVPEQLCEVTGCREREYAAYK*GSAYCT
Trigger: GGTACAGTATGCTGAGCCCCACTTATAAGCAGCGTA...CTCTCTTTCCCTGCAACCTGTTACCTCACACAGCTGCTCAGGAACAGCAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424536.2
CDS-3UTR CCA 90 bp TTTACTATTTCTGCTGTTCCTGAGCAGCTGTGTGAGGTAACAGGTTGCAGGGAAGTCACTTCCTTCAGCTaGATGGAGATCGTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: FTISAVPEQLCEVTGCREVTSFS*MEIVVS
Trigger: GGAGACCACGATCTCCATCCAGCTGAAGGAAGTGAC...TTCCCTGCAACCTGTTACCTCACACAGCTGCTCAGGAACAGCAGAAATAGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424536.2
CDS-3UTR TCA 90 bp GTGCCACATACATGGAAGAGTTTTACTATTTCTGCTGTTCCTGAGCAGCTGTGTCTTCGGGGAGTTTGCTaGACAGTTTCCGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: VPHTWKSFTISAVPEQLCLRGVC*TVSGSP
Trigger: AGGACTTCCGGAAACTGTTCAGCAAACTCCCCGAAG...ACACAGCTGCTCAGGAACAGCAGAAATAGTAAAACTCTTCCATGTATGTGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424536.2
CDS-3UTR TCA 90 bp GCCACTTCTGACCCTTTATTGGGGCACTGTCGGCCCCAAATAAATATAATACATACGAGTTCTTCTCAATaGGCGACTTCACCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: ATSDPLLGHCRPQINIIHTSSSQ*ATSPGS
Trigger: GGAGCCTGGTGAAGTCGCTCATTGAGAAGAACTCGT...ATGTATTATATTTATTTGGGGCCGACAGTGCCCCAATAAAGGGTCAGAAGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS-3UTR TCA 90 bp GCCACTTCTGACCCTTTATTGGGGCACTGTCGGCCCCAAATAAATATAATACATATGGCGTTATGTGAATaGTGGGCACCTCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: ATSDPLLGHCRPQINIIHMALCE*WAPPGA
Trigger: AGCTCCTGGAGGTGCCCATCATTCACATAACGCCAT...ATGTATTATATTTATTTGGGGCCGACAGTGCCCCAATAAAGGGTCAGAAGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS-3UTR GCA 90 bp GCCACTTCTGACCCTTTATTGGGGCACTGTCGGCCCCAAATAAATATAATACATATCTGCCTCCACTTGTaGACCTCCACGCTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: ATSDPLLGHCRPQINIIHICLHL*TSTLWN
Trigger: ATTCCACAGCGTGGAGGTGCACAAGTGGAGGCAGAT...ATGTATTATATTTATTTGGGGCCGACAGTGCCCCAATAAAGGGTCAGAAGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS-3UTR GCA 90 bp AGTTTTACTATTTCTGCTGTTCCTGAGCAGCTGTGTGAGGTAACAGGTTGCAGGGGAGAGAACTCAGGGTaGAGAACAAATGGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: SFTISAVPEQLCEVTGCRGENSG*RTNGAL
Trigger: CAAAGCCCCATTTGTTCTGCACCCTGAGTTCTCTCC...CCTGCAACCTGTTACCTCACACAGCTGCTCAGGAACAGCAGAAATAGTAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424536.2
CDS-3UTR CCA 90 bp TTTACTATTTCTGCTGTTCCTGAGCAGCTGTGTGAGGTAACAGGTTGCAGGGAAAGGGTGCAGAACAAATaGGGCTTTGCATGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: FTISAVPEQLCEVTGCRERVQNK*GFACLG
Trigger: CCCCAAACATGCAAAGCCCCATTTGTTCTGCACCCT...TTCCCTGCAACCTGTTACCTCACACAGCTGCTCAGGAACAGCAGAAATAGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424536.2
CDS-3UTR CCA 90 bp GCCACTTCTGACCCTTTATTGGGGCACTGTCGGCCCCAAATAAATATAATACATGGTGTGGTCTCTTATTaGGTCCTCCTCCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: ATSDPLLGHCRPQINIIHGVVSY*VLLLCP
Trigger: TGGACAGAGGAGGAGGACCCAATAAGAGACCACACC...ATGTATTATATTTATTTGGGGCCGACAGTGCCCCAATAAAGGGTCAGAAGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS-3UTR GCA 90 bp AGTTTTACTATTTCTGCTGTTCCTGAGCAGCTGTGTGAGGTAACAGGTTGCAGGATACTGTACCAGCTCTaGATCTTCTTGCTGTTGCGG +
Preference number: 4 (lower is better)
Translates to: SFTISAVPEQLCEVTGCRILYQL*IFLLLR
Trigger: CCGCAACAGCAAGAAGATGCAGAGCTGGTACAGTAT...CCTGCAACCTGTTACCTCACACAGCTGCTCAGGAACAGCAGAAATAGTAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424536.2
CDS CCA 90 bp CTCCGGCCAGAGTGGGGTGTGGTGTCGAACATGGATGCGGCGCGGTaGGCGCGCCCCGGGCGCAGGGCAGGGCAGGGCAGGGCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: LRPEWGVVSNMDAAR*ARPGRRAGQGRAGL
Trigger: CAGCCCTGCCCTGCCCTGCCCTGCCCTGCGCCCGGGGCGCGCCCACCGCGCCGCATCCATGTTCGACACCACACCCCACTCTGGCCGGAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317991.10
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp CCCCGTGAGCCCGCCAGCTCAGGGGCCGCTTCCGCCGCCGCAGGCCGGATAGCAGCCGTCTGGGGGAACTaGCCCTTGGCCAGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PREPASSGAASAAAGRIAAVWGN*PLARAR
Trigger: CCTGGCCCTGGCCAAGGGCAAGTTCCCCCAGACGGC...TGCTATCCGGCCTGCGGCGGCGGAAGCGGCCCCTGAGCTGGCGGGCTCACGGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CAA 90 bp CCCCGTGAGCCCGCCAGCTCAGGGGCCGCTTCCGCCGCCGCAGGCCGGATAGCATGGGGGAACTTGCCCTaGGCCAGGGCCAGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: PREPASSGAASAAAGRIAWGNLP*ARARLC
Trigger: GCACAGCCTGGCCCTGGCCAAGGGCAAGTTCCCCCA...TGCTATCCGGCCTGCGGCGGCGGAAGCGGCCCCTGAGCTGGCGGGCTCACGGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CAA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCGCGAACCCACTGGGCTaGGCTCCTGGCTGCGGTCAG +
Preference number: 5 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLANPLG*APGCGQ
Trigger: CTGACCGCAGCCAGGAGCCAAGCCCAGTGGGTTCGC...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp TTCCGCCGCCGCAGGCCGGATAGCAAGCCCCGGGCATCCTTCCCGCCTTCCTCCCGGCGCTGGTGGCACTaGCTGTCCCCACTCCAGGGG +
Preference number: 5 (lower is better)
Translates to: FRRRRPDSKPRASFPPSSRRWWH*LSPLQG
Trigger: CCCCTGGAGTGGGGACAGCAAGTGCCACCAGCGCCG...GGAGGAAGGCGGGAAGGATGCCCGGGGCTTGCTATCCGGCCTGCGGCGGCGGAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS GCA 90 bp CAGGCCCTGGGCCCTGTCACCCTGTGGCTGCTGCTTCCGCTGCCCTaGTGGGAGGTCAGGCGAGCCCTGGGGACTGCCCTGTGCCAACAG +
Preference number: 5 (lower is better)
Translates to: QALGPVTLWLLLPLP*WEVRRALGTALCQQ
Trigger: CTGTTGGCACAGGGCAGTCCCCAGGGCTCGCCTGACCTCCCAGCAGGGCAGCGGAAGCAGCAGCCACAGGGTGACAGGGCCCAGGGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS CCA 90 bp GCCCTGGGCCCTGTCACCCTGTGGCTGCTGCTTCCGCTGCCCTGCTaGGAGGTCAGGCGAGCCCTGGGGACTGCCCTGTGCCAACAGGGT +
Preference number: 5 (lower is better)
Translates to: ALGPVTLWLLLPLPC*EVRRALGTALCQQG
Trigger: ACCCTGTTGGCACAGGGCAGTCCCCAGGGCTCGCCTGACCTCCCAGCAGGGCAGCGGAAGCAGCAGCCACAGGGTGACAGGGCCCAGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS-3UTR CAA 90 bp CCCCGTGAGCCCGCCAGCTCAGGGGCCGCTTCCGCCGCCGCAGGCCGGATAGCAAGGATCTGCCTCCACTaGTGCACCTCCACGCTGTGG +
Preference number: 5 (lower is better)
Translates to: PREPASSGAASAAAGRIARICLH*CTSTLW
Trigger: CCACAGCGTGGAGGTGCACAAGTGGAGGCAGATCCT...TGCTATCCGGCCTGCGGCGGCGGAAGCGGCCCCTGAGCTGGCGGGCTCACGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS CCA 90 bp CGGCCCGCCAGATTCCCCACCAGCCCTCGGCCTCCGCAGTTCCCCTaGCTTCCACAAGGAGGCAGCCACGATCTCCCGCACCAGACCTGG +
Preference number: 5 (lower is better)
Translates to: RPARFPTSPRPPQFP*LPQGGSHDLPHQTW
Trigger: CCAGGTCTGGTGCGGGAGATCGTGGCTGCCTCCTTGTGGAAGCCAGGGGAACTGCGGAGGCCGAGGGCTGGTGGGGAATCTGGCGGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595596.1
CDS-3UTR CAA 90 bp AGGAGGCGGCCGGAGAGGTCGGGAAGCAGGGCAGCCAAGTCCGCTTCCTCCCCAGCGAACCCACTGGGCTaGGCTCCTGGCTGCGGTCAG +
Preference number: 5 (lower is better)
Translates to: RRRPERSGSRAAKSASSPANPLG*APGCGQ
Trigger: CTGACCGCAGCCAGGAGCCAAGCCCAGTGGGTTCGC...TGGGGAGGAAGCGGACTTGGCTGCCCTGCTTCCCGACCTCTCCGGCCGCCTCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CAA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGGCCGTCTGGGGGAACTaGCCCTTGGCCAGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLAVWGN*PLARAR
Trigger: CCTGGCCCTGGCCAAGGGCAAGTTCCCCCAGACGGC...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS CCA 90 bp GCTTTGCATGTTTGGGGGAGGCGGCCTGCTGAGCGGGGGACCGCGTaGTCCCGTCACCGGGTCCTCCGTCACCTTCTCGCTCTCCGTGCA +
Preference number: 5 (lower is better)
Translates to: ALHVWGRRPAERGTA*SRHRVLRHLLALRA
Trigger: TGCACGGAGAGCGAGAAGGTGACGGAGGACCCGGTGACGGGACCACGCGGTCCCCCGCTCAGCAGGCCGCCTCCCCCAAACATGCAAAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424536.2
ENST00000599476.1
CDS-3UTR CAA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCGCGAACCCACTGGGCTaGGCTCCTGGCTGCGGTCAG +
Preference number: 5 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVANPLG*APGCGQ
Trigger: CTGACCGCAGCCAGGAGCCAAGCCCAGTGGGTTCGC...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTACCACGGAGGCGCTCTaGGGGCCCAGTGGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCTTEAL*GPSGLL
Trigger: CAGCAACCCACTGGGCCCCAAGAGCGCCTCCGTGGT...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGACCACGGAGGCGCTCTaGGGGCCCAGTGGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLTTEAL*GPSGLL
Trigger: CAGCAACCCACTGGGCCCCAAGAGCGCCTCCGTGGT...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAACTCGGAGCCGCGCCTaGTTCCGGGCCAGACCCAGG +
Preference number: 5 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGTRSRA*FRARPR
Trigger: CCTGGGTCTGGCCCGGAACAAGGCGCGGCTCCGAGT...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp GCGGGTGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCGACAGCTTCTCAGCCTaGGCGAGCTCTCGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: AGGRCLALTPCQQWPPRLDSFSA*ASSRSR
Trigger: TCTGGAGCGAGAGCTCGCCAAGGCTGAGAAGCTGTC...GAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCACCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS GCA 90 bp GCAGGAGCTGCAGCCGTTTCCGGAGCGATGGGGAGCTGCTTGGCGTaGTCCGGCCAGAGTGGGGTGTGGTGTCGAACATGGATGCGGCGC +
Preference number: 5 (lower is better)
Translates to: AGAAAVSGAMGSCLA*SGQSGVWCRTWMRR
Trigger: GCGCCGCATCCATGTTCGACACCACACCCCACTCTGGCCGGAGCACGCCAAGCAGCTCCCCATCGCTCCGGAAACGGCTGCAGCTCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000424536.2
ENST00000600231.5
ENST00000680623.1
CDS CCA 90 bp GGAAAGGTTGGGCGTGACATGGCCACGGCGCGAACCCACTGGGCTTaGCTCCTGGCTGCGGTCAGCTGCCCCCGAGGAGGTGATGTCGCT +
Preference number: 5 (lower is better)
Translates to: GKVGRDMATARTHWA*LLAAVSCPRGGDVA
Trigger: AGCGACATCACCTCCTCGGGGGCAGCTGACCGCAGCCAGGAGCCAAGCCCAGTGGGTTCGCGCCGTGGCCATGTCACGCCCAACCTTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000595596.1
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS CCA 90 bp CCATGGTCTGCGTCGCTGCTGGCTCGGGAAAGGTTGGGCGTGACATaGCCACGGCGCGAACCCACTGGGCTTGGCTCCTGGCTGCGGTCA +
Preference number: 5 (lower is better)
Translates to: PWSASLLARERLGVT*PRREPTGLGSWLRS
Trigger: TGACCGCAGCCAGGAGCCAAGCCCAGTGGGTTCGCGCCGTGGCCATGTCACGCCCAACCTTTCCCGAGCCAGCAGCGACGCAGACCATGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000595596.1
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCGCGATGGGGAGCTGCTaGGCGTGCTCCGGCCAGAGT +
Preference number: 5 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVAMGSC*ACSGQS
Trigger: ACTCTGGCCGGAGCACGCCAAGCAGCTCCCCATCGC...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCAGCGATGGGGAGCTGCTaGGCGTGCTCCGGCCAGAGT +
Preference number: 5 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPAMGSC*ACSGQS
Trigger: ACTCTGGCCGGAGCACGCCAAGCAGCTCCCCATCGC...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAACGGCGCTGGTGGCACTaGCTGTCCCCACTCCAGGGG +
Preference number: 5 (lower is better)
Translates to: RASSGRRGSVCPSVHVGERRWWH*LSPLQG
Trigger: CCCCTGGAGTGGGGACAGCAAGTGCCACCAGCGCCG...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp AGGCCGGGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCGGCGCTGGTGGCACTaGCTGTCCCCACTCCAGGGG +
Preference number: 5 (lower is better)
Translates to: RPGQLPGLKCISVPWSPRRRWWH*LSPLQG
Trigger: CCCCTGGAGTGGGGACAGCAAGTGCCACCAGCGCCG...ACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAAACTCGGAGCCGCGCCTaGTTCCGGGCCAGACCCAGG +
Preference number: 5 (lower is better)
Translates to: RASSGRRGSVCPSVHVGETRSRA*FRARPR
Trigger: CCTGGGTCTGGCCCGGAACAAGGCGCGGCTCCGAGT...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp AGGCCGGGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTACTCGGAGCCGCGCCTaGTTCCGGGCCAGACCCAGG +
Preference number: 5 (lower is better)
Translates to: RPGQLPGLKCISVPWSPRTRSRA*FRARPR
Trigger: CCTGGGTCTGGCCCGGAACAAGGCGCGGCTCCGAGT...ACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCTGGGGGAACTTGCCCTaGGCCAGGGCCAGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVWGNLP*ARARLC
Trigger: GCACAGCCTGGCCCTGGCCAAGGGCAAGTTCCCCCA...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAAGCCGTCTGGGGGAACTaGCCCTTGGCCAGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: RASSGRRGSVCPSVHVGEAVWGN*PLARAR
Trigger: CCTGGCCCTGGCCAAGGGCAAGTTCCCCCAGACGGC...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS CCA 90 bp GAGGAGGCGGCCGGAGAGGTCGGGAAGCAGGGCAGCCAAGTCCGCTaGAGACAGAGGAGAGCCGAGGATGATGACTGCCTCCACTCCTCC +
Preference number: 5 (lower is better)
Translates to: EEAAGEVGKQGSQVR*RQRRAEDDDCLHSS
Trigger: GGAGGAGTGGAGGCAGTCATCATCCTCGGCTCTCCTCTGTCTCCAGCGGACTTGGCTGCCCTGCTTCCCGACCTCTCCGGCCGCCTCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598118.1
CDS-3UTR CAA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCTGGCTCGGGAAAGGTaGGGCGTGACATGGCCACGG +
Preference number: 5 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVLARER*GVTWPR
Trigger: CCGTGGCCATGTCACGCCCAACCTTTCCCGAGCCAG...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp CTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTCGGCGCTGGTGGCACTaGCTGTCCCCACTCCAGGGG +
Preference number: 5 (lower is better)
Translates to: LTPCQQWPPRLCVSICPCRRWWH*LSPLQG
Trigger: CCCCTGGAGTGGGGACAGCAAGTGCCACCAGCGCCG...ACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp AGGCCGGGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTACCACGGAGGCGCTCTaGGGGCCCAGTGGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: RPGQLPGLKCISVPWSPRTTEAL*GPSGLL
Trigger: CAGCAACCCACTGGGCCCCAAGAGCGCCTCCGTGGT...ACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACACTCGGAGCCGCGCCTaGTTCCGGGCCAGACCCAGG +
Preference number: 5 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHTRSRA*FRARPR
Trigger: CCTGGGTCTGGCCCGGAACAAGGCGCGGCTCCGAGT...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAATGGGGGAACTTGCCCTaGGCCAGGGCCAGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: RASSGRRGSVCPSVHVGEWGNLP*ARARLC
Trigger: GCACAGCCTGGCCCTGGCCAAGGGCAAGTTCCCCCA...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGGCGATGGGGAGCTGCTaGGCGTGCTCCGGCCAGAGT +
Preference number: 5 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWAMGSC*ACSGQS
Trigger: ACTCTGGCCGGAGCACGCCAAGCAGCTCCCCATCGC...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp CCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGACATCTCCCACTTCCTaGGGGGTCCCCAGACCGTTC +
Preference number: 5 (lower is better)
Translates to: PGAHTVPAVAAEALCVHLTSPTS*GVPRPF
Trigger: GAACGGTCTGGGGACCCCCAAGGAAGTGGGAGATGT...CAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000680623.1
CDS-3UTR CAA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCACATCTCCCACTTCCTaGGGGGTCCCCAGACCGTTC +
Preference number: 5 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVTSPTS*GVPRPF
Trigger: GAACGGTCTGGGGACCCCCAAGGAAGTGGGAGATGT...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000680623.1
CDS-3UTR CAA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAACTGGCTCGGGAAAGGTaGGGCGTGACATGGCCACGG +
Preference number: 5 (lower is better)
Translates to: RASSGRRGSVCPSVHVGELARER*GVTWPR
Trigger: CCGTGGCCATGTCACGCCCAACCTTTCCCGAGCCAG...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp TGGAGCCGCTCAGCGCCCACATGGAAGACAGAGTTGATGAGGAGGCGGCCGGAGCTGGCTCGGGAAAGGTaGGGCGTGACATGGCCACGG +
Preference number: 5 (lower is better)
Translates to: WSRSAPTWKTELMRRRPELARER*GVTWPR
Trigger: CCGTGGCCATGTCACGCCCAACCTTTCCCGAGCCAG...CTCCGGCCGCCTCCTCATCAACTCTGTCTTCCATGTGGGCGCTGAGCGGCTCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CAA 90 bp GAAGGGCGAGTCCGAGAAGAGCATCTGCTGGAGCCGCTCAGCGCCCACATGGAAACCACGGAGGCGCTCTaGGGGCCCAGTGGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: EGRVREEHLLEPLSAHMETTEAL*GPSGLL
Trigger: CAGCAACCCACTGGGCCCCAAGAGCGCCTCCGTGGT...TTCCATGTGGGCGCTGAGCGGCTCCAGCAGATGCTCTTCTCGGACTCGCCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CAA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCGACAGCTTCTCAGCCTaGGCGAGCTCTCGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVDSFSA*ASSRSR
Trigger: TCTGGAGCGAGAGCTCGCCAAGGCTGAGAAGCTGTC...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGTGGGGGAACTTGCCCTaGGCCAGGGCCAGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWWGNLP*ARARLC
Trigger: GCACAGCCTGGCCCTGGCCAAGGGCAAGTTCCCCCA...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGACAGATCTGGATGGCGTaGGGGATCAGCTTGGCCGTC +
Preference number: 5 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGQIWMA*GISLAV
Trigger: GACGGCCAAGCTGATCCCCAACGCCATCCAGATCTG...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp CTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTCTGGCTCGGGAAAGGTaGGGCGTGACATGGCCACGG +
Preference number: 5 (lower is better)
Translates to: LTPCQQWPPRLCVSICPCLARER*GVTWPR
Trigger: CCGTGGCCATGTCACGCCCAACCTTTCCCGAGCCAG...ACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCTCTACCTGCTCCTCCTaGTCCTCCTCTGCCCCATGG +
Preference number: 5 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVSTCSS*SSSAPW
Trigger: CCATGGGGCAGAGGAGGACAAGGAGGAGCAGGTAGA...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCAGACAGCTTCTCAGCCTaGGCGAGCTCTCGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPDSFSA*ASSRSR
Trigger: TCTGGAGCGAGAGCTCGCCAAGGCTGAGAAGCTGTC...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS TCA 90 bp GGGTGCAGGCGGGGGACTCCCCATCACTGGATGGCGTTATGTGAATaGTGGGCACCTCCAGGAGCTTCCAGGACTCAGAGGCCAGGCCCT +
Preference number: 5 (lower is better)
Translates to: GCRRGTPHHWMALCE*WAPPGASRTQRPGP
Trigger: AGGGCCTGGCCTCTGAGTCCTGGAAGCTCCTGGAGGTGCCCATCATTCACATAACGCCATCCAGTGATGGGGAGTCCCCCGCCTGCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS GCA 90 bp CGCGTGGTCCCGTCACCGGGTCCTCCGTCACCTTCTCGCTCTCCGTaGAGATCTGGATGGCGTTGGGGATCAGCTTGGCCGTCTTTTCCT +
Preference number: 5 (lower is better)
Translates to: RVVPSPGPPSPSRSP*RSGWRWGSAWPSFP
Trigger: AGGAAAAGACGGCCAAGCTGATCCCCAACGCCATCCAGATCTGCACGGAGAGCGAGAAGGTGACGGAGGACCCGGTGACGGGACCACGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424536.2
ENST00000599476.1
CDS GCA 90 bp GCGCCTCCTACCTCATCCAGGAGCTCCACGGAGGCCCGCAGGATCTaGCTCCACTTGTGCACCTCCACGCTGTGGAATTGCTTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: APPTSSRSSTEARRI*LHLCTSTLWNCFCS
Trigger: GCTGCAGAAGCAATTCCACAGCGTGGAGGTGCACAAGTGGAGGCAGATCCTGCGGGCCTCCGTGGAGCTCCTGGATGAGGTAGGAGGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603907.1
CDS CCA 90 bp GAGCACAGCTGGACACTGACACAGAGCCCTCCTGTGACTCAGGGATaGGTTGAGGGTGGGCACGTGCTCCAGGCCCAGACAGACAGCCAC +
Preference number: 5 (lower is better)
Translates to: EHSWTLTQSPPVTQG*VEGGHVLQAQTDSH
Trigger: GTGGCTGTCTGTCTGGGCCTGGAGCACGTGCCCACCCTCAACCCATCCCTGAGTCACAGGAGGGCTCTGTGTCAGTGTCCAGCTGTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598118.1
CDS-3UTR CAA 90 bp AGGCCGGGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCAGATCTGGATGGCGTaGGGGATCAGCTTGGCCGTC +
Preference number: 5 (lower is better)
Translates to: RPGQLPGLKCISVPWSPRQIWMA*GISLAV
Trigger: GACGGCCAAGCTGATCCCCAACGCCATCCAGATCTG...ACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAATCTACCTGCTCCTCCTaGTCCTCCTCTGCCCCATGG +
Preference number: 5 (lower is better)
Translates to: RASSGRRGSVCPSVHVGESTCSS*SSSAPW
Trigger: CCATGGGGCAGAGGAGGACAAGGAGGAGCAGGTAGA...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCACGTCTGTGAACTaGCACTGCTGTAGGAAGCCC +
Preference number: 5 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCVTSVN*HCCRKP
Trigger: GGGCTTCCTACAGCAGTGCAAGTTCACAGACGTGAC...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAAAGGATCTGCCTCCACTaGTGCACCTCCACGCTGTGG +
Preference number: 5 (lower is better)
Translates to: RASSGRRGSVCPSVHVGERICLH*CTSTLW
Trigger: CCACAGCGTGGAGGTGCACAAGTGGAGGCAGATCCT...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCACGGTGTGGTCTCTTATaGGGTCCTCCTCCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPRCGLL*GPPPLS
Trigger: GGACAGAGGAGGAGGACCCAATAAGAGACCACACCG...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS-3UTR CAA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCTGCATCTTCTTGCTGTaGCGGATGAAGTTCCGGCTG +
Preference number: 5 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVCIFLL*RMKFRL
Trigger: CAGCCGGAACTTCATCCGCAACAGCAAGAAGATGCA...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAGCGTTGGGGATCAGCTaGGCCGTCTTTTCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGALGIS*AVFSFF
Trigger: GAAGAAGGAAAAGACGGCCAAGCTGATCCCCAACGC...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACCAGATCTGGATGGCGTaGGGGATCAGCTTGGCCGTC +
Preference number: 5 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHQIWMA*GISLAV
Trigger: GACGGCCAAGCTGATCCCCAACGCCATCCAGATCTG...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACACATCTCCCACTTCCTaGGGGGTCCCCAGACCGTTC +
Preference number: 5 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHTSPTS*GVPRPF
Trigger: GAACGGTCTGGGGACCCCCAAGGAAGTGGGAGATGT...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000680623.1
CDS-3UTR CAA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGACATCTCCCACTTCCTaGGGGGTCCCCAGACCGTTC +
Preference number: 5 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWTSPTS*GVPRPF
Trigger: GAACGGTCTGGGGACCCCCAAGGAAGTGGGAGATGT...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000680623.1
CDS-3UTR CAA 90 bp GAAGGGCGAGTCCGAGAAGAGCATCTGCTGGAGCCGCTCAGCGCCCACATGGAATCTACCTGCTCCTCCTaGTCCTCCTCTGCCCCATGG +
Preference number: 5 (lower is better)
Translates to: EGRVREEHLLEPLSAHMESTCSS*SSSAPW
Trigger: CCATGGGGCAGAGGAGGACAAGGAGGAGCAGGTAGA...TTCCATGTGGGCGCTGAGCGGCTCCAGCAGATGCTCTTCTCGGACTCGCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CAA 90 bp CTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTTCTACCTGCTCCTCCTaGTCCTCCTCTGCCCCATGG +
Preference number: 5 (lower is better)
Translates to: LTPCQQWPPRLCVSICPCSTCSS*SSSAPW
Trigger: CCATGGGGCAGAGGAGGACAAGGAGGAGCAGGTAGA...ACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAGTCACGTCTGTGAACTaGCACTGCTGTAGGAAGCCC +
Preference number: 5 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGVTSVN*HCCRKP
Trigger: GGGCTTCCTACAGCAGTGCAAGTTCACAGACGTGAC...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCAGTCACGTCTGTGAACTaGCACTGCTGTAGGAAGCCC +
Preference number: 5 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPVTSVN*HCCRKP
Trigger: GGGCTTCCTACAGCAGTGCAAGTTCACAGACGTGAC...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGGACAGCTTCTCAGCCTaGGCGAGCTCTCGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWDSFSA*ASSRSR
Trigger: TCTGGAGCGAGAGCTCGCCAAGGCTGAGAAGCTGTC...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACGACAGCTTCTCAGCCTaGGCGAGCTCTCGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHDSFSA*ASSRSR
Trigger: TCTGGAGCGAGAGCTCGCCAAGGCTGAGAAGCTGTC...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGGATCTGCCTCCACTaGTGCACCTCCACGCTGTGG +
Preference number: 5 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHRICLH*CTSTLW
Trigger: CCACAGCGTGGAGGTGCACAAGTGGAGGCAGATCCT...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGAGGATCTGCCTCCACTaGTGCACCTCCACGCTGTGG +
Preference number: 5 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWRICLH*CTSTLW
Trigger: CCACAGCGTGGAGGTGCACAAGTGGAGGCAGATCCT...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp GCCCAGTGGGTTGCTGATGGGGATGGTGTACGTCAGCACCCGGCGCTGGTGGCAACTTCTGACCCTTTATaGGGGCACTGTCGGCCCCAA +
Preference number: 5 (lower is better)
Translates to: AQWVADGDGVRQHPALVATSDPL*GHCRPQ
Trigger: TTGGGGCCGACAGTGCCCCAATAAAGGGTCAGAAGT...TGCCACCAGCGCCGGGTGCTGACGTACACCATCCCCATCAGCAACCCACTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CAA 90 bp CCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGACTCAGCATCTTGCTGTaGCGGATGAAGTTCCGGCTG +
Preference number: 5 (lower is better)
Translates to: PCQQWPPRLCVSICPCGGLSILL*RMKFRL
Trigger: CAGCCGGAACTTCATCCGCAACAGCAAGATGCTGAG...TCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411896.6
CDS-3UTR CAA 90 bp GCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGCATCTTCTTGCTGTaGCGGATGAAGTTCCGGCTG +
Preference number: 5 (lower is better)
Translates to: ALTPCQQWPPRLCVSICPCIFLL*RMKFRL
Trigger: CAGCCGGAACTTCATCCGCAACAGCAAGAAGATGCA...TGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp GAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCAGCTCTGCATCTTCTaGCTGTTGCGGATGAAGTTC +
Preference number: 5 (lower is better)
Translates to: EMPGAHTVPAVAAEALCVQLCIF*LLRMKF
Trigger: GAACTTCATCCGCAACAGCAAGAAGATGCAGAGCTG...GACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp TGGGAGATGCCTGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTCAGCTCTGCATCTTCTaGCTGTTGCGGATGAAGTTC +
Preference number: 5 (lower is better)
Translates to: WEMPGAHTVPAVAAEALCQLCIF*LLRMKF
Trigger: GAACTTCATCCGCAACAGCAAGAAGATGCAGAGCTG...ACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCAGGCATCTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp TGGCGCTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCTCTGCTTCGGGGAGTTaGCTGAACAGTTTCCGGAAG +
Preference number: 5 (lower is better)
Translates to: WRSHRASSGRRGSVCPSVSASGS*LNSFRK
Trigger: CTTCCGGAAACTGTTCAGCAAACTCCCCGAAGCAGA...GACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAGCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAAGCGTTGGGGATCAGCTaGGCCGTCTTTTCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: RASSGRRGSVCPSVHVGEALGIS*AVFSFF
Trigger: GAAGAAGGAAAAGACGGCCAAGCTGATCCCCAACGC...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp TCACCAGGCTCCACGGCTGCTTTCGGTAGCGGATCTCAGAAGACACTCGGAGCCCAGATCTGGATGGCGTaGGGGATCAGCTTGGCCGTC +
Preference number: 5 (lower is better)
Translates to: SPGSTAAFGSGSQKTLGAQIWMA*GISLAV
Trigger: GACGGCCAAGCTGATCCCCAACGCCATCCAGATCTG...GGCTCCGAGTGTCTTCTGAGATCCGCTACCGAAAGCAGCCGTGGAGCCTGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CAA 90 bp CGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGGGGGAAACTTCTGACCCTTTATaGGGGCACTGTCGGCCCCAA +
Preference number: 5 (lower is better)
Translates to: RASSGRRGSVCPSVHVGETSDPL*GHCRPQ
Trigger: TTGGGGCCGACAGTGCCCCAATAAAGGGTCAGAAGT...TTCCCCCACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp AGGCCGGGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTACTTCTGACCCTTTATaGGGGCACTGTCGGCCCCAA +
Preference number: 5 (lower is better)
Translates to: RPGQLPGLKCISVPWSPRTSDPL*GHCRPQ
Trigger: TTGGGGCCGACAGTGCCCCAATAAAGGGTCAGAAGT...ACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCCCGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS TCA 90 bp GACCGTTCAGCTGCAAGGGGGAGACATAGTCCTCATCCTCACTGGTaGGGCCCAGCTCTGAGCCGTAGCACTGATGCACCAGGTGCCAGA +
Preference number: 5 (lower is better)
Translates to: DRSAARGRHSPHPHW*GPALSRSTDAPGAR
Trigger: TCTGGCACCTGGTGCATCAGTGCTACGGCTCAGAGCTGGGCCTCACCAGTGAGGATGAGGACTATGTCTCCCCCTTGCAGCTGAACGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000595596.1
ENST00000598580.1
ENST00000599564.5
ENST00000680623.1
CDS CCA 90 bp CCCGTCACCGGGTCCTCCGTCACCTTCTCGCTCTCCGTGCAGATCTaGATGGCGTTGGGGATCAGCTTGGCCGTCTTTTCCTTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: PVTGSSVTFSLSVQI*MALGISLAVFSFFR
Trigger: TCTGAAGAAGGAAAAGACGGCCAAGCTGATCCCCAACGCCATCCAGATCTGCACGGAGAGCGAGAAGGTGACGGAGGACCCGGTGACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424536.2
ENST00000599476.1
CDS-3UTR CAA 90 bp GAGACAGCTTCTCAGCCTTGGCGAGCTCTCGCTCCAGATGGTGGAAATAGTCTTGCGATGGGGAGCTGCTaGGCGTGCTCCGGCCAGAGT +
Preference number: 5 (lower is better)
Translates to: ETASQPWRALAPDGGNSLAMGSC*ACSGQS
Trigger: ACTCTGGCCGGAGCACGCCAAGCAGCTCCCCATCGC...AAGACTATTTCCACCATCTGGAGCGAGAGCTCGCCAAGGCTGAGAAGCTGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CAA 90 bp CTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTGCGTTGGGGATCAGCTaGGCCGTCTTTTCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: LTPCQQWPPRLCVSICPCALGIS*AVFSFF
Trigger: GAAGAAGGAAAAGACGGCCAAGCTGATCCCCAACGC...ACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp CTCACACCGTGCCAGCAGTGGCCGCCGAGGCTCTGTGTGTCCATCTGTCCATGTACTTCTGACCCTTTATaGGGGCACTGTCGGCCCCAA +
Preference number: 5 (lower is better)
Translates to: LTPCQQWPPRLCVSICPCTSDPL*GHCRPQ
Trigger: TTGGGGCCGACAGTGCCCCAATAAAGGGTCAGAAGT...ACATGGACAGATGGACACACAGAGCCTCGGCGGCCACTGCTGGCACGGTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGGTGGGGCTCAGCATCTaGCTGTTGCGGATGAAGTTC +
Preference number: 5 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWVGLSI*LLRMKF
Trigger: GAACTTCATCCGCAACAGCAAGATGCTGAGCCCCAC...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000411896.6
CDS GCA 90 bp CCTGCTACAGCCCCTCCAGGGCCTGCGCCCAGGACTCAAACTTCCTaGTTCCCAAGTCCCCACAATACTCTGGCCAGAGAATGTTCCCAT +
Preference number: 5 (lower is better)
Translates to: PATAPPGPAPRTQTS*FPSPHNTLARECSH
Trigger: ATGGGAACATTCTCTGGCCAGAGTATTGTGGGGACTTGGGAAGCAGGAAGTTTGAGTCCTGGGCGCAGGCCCTGGAGGGGCTGTAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595596.1
CDS-3UTR CAA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGTGCATCTTCTTGCTGTaGCGGATGAAGTTCCGGCTG +
Preference number: 5 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWCIFLL*RMKFRL
Trigger: CAGCCGGAACTTCATCCGCAACAGCAAGAAGATGCA...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp CCTCCACGCTGTGGAATTGCTTCTGCAGCGCCAGGATCTCGGCCCACTCTGTGGTGCATCTTCTTGCTGTaGCGGATGAAGTTCCGGCTG +
Preference number: 5 (lower is better)
Translates to: PPRCGIASAAPGSRPTLWCIFLL*RMKFRL
Trigger: CAGCCGGAACTTCATCCGCAACAGCAAGAAGATGCA...CCACAGAGTGGGCCGAGATCCTGGCGCTGCAGAAGCAATTCCACAGCGTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS-3UTR CAA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACTCTGCTTCGGGGAGTTaGCTGAACAGTTTCCGGAAG +
Preference number: 5 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHSASGS*LNSFRK
Trigger: CTTCCGGAAACTGTTCAGCAAACTCCCCGAAGCAGA...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp AGGTTGCAGGGAAAGAGAGGAGAGGCTGGTGCGGGGATCAGGTCAGGGGTGATGGCGTTGGGGATCAGCTaGGCCGTCTTTTCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: RLQGKRGEAGAGIRSGVMALGIS*AVFSFF
Trigger: GAAGAAGGAAAAGACGGCCAAGCTGATCCCCAACGC...CATCACCCCTGACCTGATCCCCGCACCAGCCTCTCCTCTCTTTCCCTGCAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000424536.2
CDS CCA 90 bp TGCTTAAGACTGAGCGAGGCTTGCAAGTACCGGAGGCGAATGAATTaGGCCCGCCTGCCTCACCTTCCTCCCCAGTGGATGAAGAGGAGT +
Preference number: 5 (lower is better)
Translates to: CLRLSEACKYRRRMN*ARLPHLPPQWMKRS
Trigger: ACTCCTCTTCATCCACTGGGGAGGAAGGTGAGGCAGGCGGGCCCAATTCATTCGCCTCCGGTACTTGCAAGCCTCGCTCAGTCTTAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598362.1
CDS-3UTR CAA 90 bp ATTTCTGCTGTTCCTGAGCAGCTGTGTGAGGTAACAGGTTGCAGGGAAAGAGAGGCGATGGGGAGCTGCTaGGCGTGCTCCGGCCAGAGT +
Preference number: 5 (lower is better)
Translates to: ISAVPEQLCEVTGCREREAMGSC*ACSGQS
Trigger: ACTCTGGCCGGAGCACGCCAAGCAGCTCCCCATCGC...CTCTCTTTCCCTGCAACCTGTTACCTCACACAGCTGCTCAGGAACAGCAGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424536.2
CDS-3UTR CAA 90 bp CCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACAGCCCCTGGCAGCTCTGCATCTTCTaGCTGTTGCGGATGAAGTTC +
Preference number: 5 (lower is better)
Translates to: PGLKCISVPWSPRLHSPWQLCIF*LLRMKF
Trigger: GAACTTCATCCGCAACAGCAAGAAGATGCAGAGCTG...CCAGGGGCTGTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp GGCCAGCTCCCTGGTCTAAAGTGCATCTCGGTTCCGTGGTCCCCACGTCTGCACCAGCTCTGCATCTTCTaGCTGTTGCGGATGAAGTTC +
Preference number: 5 (lower is better)
Translates to: GQLPGLKCISVPWSPRLHQLCIF*LLRMKF
Trigger: GAACTTCATCCGCAACAGCAAGAAGATGCAGAGCTG...GTGCAGACGTGGGGACCACGGAACCGAGATGCACTTTAGACCAGGGAGCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317991.10
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS-3UTR CAA 90 bp AGGTTGCAGGGAAAGAGAGGAGAGGCTGGTGCGGGGATCAGGTCAGGGGTGATGTCTGCTTCGGGGAGTTaGCTGAACAGTTTCCGGAAG +
Preference number: 5 (lower is better)
Translates to: RLQGKRGEAGAGIRSGVMSASGS*LNSFRK
Trigger: CTTCCGGAAACTGTTCAGCAAACTCCCCGAAGCAGA...CATCACCCCTGACCTGATCCCCGCACCAGCCTCTCCTCTCTTTCCCTGCAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424536.2
CDS-3UTR CAA 90 bp GAGGCCCGCAGGATCTGCCTCCACTTGTGCACCTCCACGCTGTGGAATTGCTTCTCTGCTTCGGGGAGTTaGCTGAACAGTTTCCGGAAG +
Preference number: 5 (lower is better)
Translates to: EARRICLHLCTSTLWNCFSASGS*LNSFRK
Trigger: CTTCCGGAAACTGTTCAGCAAACTCCCCGAAGCAGA...GAAGCAATTCCACAGCGTGGAGGTGCACAAGTGGAGGCAGATCCTGCGGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600231.5
CDS GCA 90 bp AGTTTGAGAGGTGAGAACCTGGATGGGGGTTCACACTCCCAATGCTaGCCCACAAAGCTCCTGGAACCCCCTCAGTCTCTTAAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: SLRGENLDGGSHSQC*PTKLLEPPQSLKSL
Trigger: CAGGGACTTAAGAGACTGAGGGGGTTCCAGGAGCTTTGTGGGGCAGCATTGGGAGTGTGAACCCCCATCCAGGTTCTCACCTCTCAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000599476.1
CDS CCA 90 bp GGTCCTCCGTCACCTTCTCGCTCTCCGTGCAGATCTGGATGGCGTTaGGGATCAGCTTGGCCGTCTTTTCCTTCTTCAGACATGTCACTT +
Preference number: 5 (lower is better)
Translates to: GPPSPSRSPCRSGWR*GSAWPSFPSSDMSL
Trigger: AAGTGACATGTCTGAAGAAGGAAAAGACGGCCAAGCTGATCCCCAACGCCATCCAGATCTGCACGGAGAGCGAGAAGGTGACGGAGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424536.2
ENST00000599476.1
CDS-3UTR CAA 90 bp ATTTCTGCTGTTCCTGAGCAGCTGTGTGAGGTAACAGGTTGCAGGGAAAGAGAGCAGATCTGGATGGCGTaGGGGATCAGCTTGGCCGTC +
Preference number: 5 (lower is better)
Translates to: ISAVPEQLCEVTGCREREQIWMA*GISLAV
Trigger: GACGGCCAAGCTGATCCCCAACGCCATCCAGATCTG...CTCTCTTTCCCTGCAACCTGTTACCTCACACAGCTGCTCAGGAACAGCAGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424536.2
CDS-3UTR CAA 90 bp GCCACTTCTGACCCTTTATTGGGGCACTGTCGGCCCCAAATAAATATAATACATGCGAACCCACTGGGCTaGGCTCCTGGCTGCGGTCAG +
Preference number: 5 (lower is better)
Translates to: ATSDPLLGHCRPQINIIHANPLG*APGCGQ
Trigger: CTGACCGCAGCCAGGAGCCAAGCCCAGTGGGTTCGC...ATGTATTATATTTATTTGGGGCCGACAGTGCCCCAATAAAGGGTCAGAAGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS GCA 90 bp GCGGCAAGCTGCCTTCAGTCTGTGCTTGTGTTCACCCTGCCATGCTaGCTTCAAAACAGAGTAAAGACAGAGATTTCTAGCAACAGCGCC +
Preference number: 5 (lower is better)
Translates to: AASCLQSVLVFTLPC*LQNRVKTEISSNSA
Trigger: GGCGCTGTTGCTAGAAATCTCTGTCTTTACTCTGTTTTGAAGGCAGCATGGCAGGGTGAACACAAGCACAGACTGAAGGCAGCTTGCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598362.1
CDS TCA 90 bp GACAGCCACTGTGCTTGGTTCTGGGTGGAGAACACACCTAGGCCCTaGGATTTAAATCACAGGGATTCATTACCAGATAGCACGCCTCCT +
Preference number: 5 (lower is better)
Translates to: DSHCAWFWVENTPRP*DLNHRDSLPDSTPP
Trigger: AGGAGGCGTGCTATCTGGTAATGAATCCCTGTGATTTAAATCTCAGGGCCTAGGTGTGTTCTCCACCCAGAACCAAGCACAGTGGCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598118.1
CDS GCA 90 bp ACCGCGGCAAGCTGCCTTCAGTCTGTGCTTGTGTTCACCCTGCCATaGTGCCTTCAAAACAGAGTAAAGACAGAGATTTCTAGCAACAGC +
Preference number: 5 (lower is better)
Translates to: TAASCLQSVLVFTLP*CLQNRVKTEISSNS
Trigger: GCTGTTGCTAGAAATCTCTGTCTTTACTCTGTTTTGAAGGCAGCATGGCAGGGTGAACACAAGCACAGACTGAAGGCAGCTTGCCGCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598362.1
CDS-3UTR CAA 90 bp GCCACTTCTGACCCTTTATTGGGGCACTGTCGGCCCCAAATAAATATAATACATTCTACCTGCTCCTCCTaGTCCTCCTCTGCCCCATGG +
Preference number: 5 (lower is better)
Translates to: ATSDPLLGHCRPQINIIHSTCSS*SSSAPW
Trigger: CCATGGGGCAGAGGAGGACAAGGAGGAGCAGGTAGA...ATGTATTATATTTATTTGGGGCCGACAGTGCCCCAATAAAGGGTCAGAAGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS GCA 90 bp GACAGATTCCAACGCACACAACACACCAGTAGCCACAATGACAGCTaGCATTTACAGATTTCTTATGTAAGCCGGGCCCCGTACCAAGCA +
Preference number: 5 (lower is better)
Translates to: DRFQRTQHTSSHNDS*HLQISYVSRAPYQA
Trigger: TGCTTGGTACGGGGCCCGGCTTACATAAGAAATCTGTAAATGGCAGCTGTCATTGTGGCTACTGGTGTGTTGTGTGCGTTGGAATCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599476.1
CDS-3UTR CAA 90 bp AGTTTTACTATTTCTGCTGTTCCTGAGCAGCTGTGTGAGGTAACAGGTTGCAGGTGCATCTTCTTGCTGTaGCGGATGAAGTTCCGGCTG +
Preference number: 5 (lower is better)
Translates to: SFTISAVPEQLCEVTGCRCIFLL*RMKFRL
Trigger: CAGCCGGAACTTCATCCGCAACAGCAAGAAGATGCA...CCTGCAACCTGTTACCTCACACAGCTGCTCAGGAACAGCAGAAATAGTAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424536.2
CDS-3UTR CAA 90 bp GCCACTTCTGACCCTTTATTGGGGCACTGTCGGCCCCAAATAAATATAATACATTCTGCTTCGGGGAGTTaGCTGAACAGTTTCCGGAAG +
Preference number: 5 (lower is better)
Translates to: ATSDPLLGHCRPQINIIHSASGS*LNSFRK
Trigger: CTTCCGGAAACTGTTCAGCAAACTCCCCGAAGCAGA...ATGTATTATATTTATTTGGGGCCGACAGTGCCCCAATAAAGGGTCAGAAGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS-3UTR CAA 90 bp GTGCCACATACATGGAAGAGTTTTACTATTTCTGCTGTTCCTGAGCAGCTGTGTCAGCTCTGCATCTTCTaGCTGTTGCGGATGAAGTTC +
Preference number: 5 (lower is better)
Translates to: VPHTWKSFTISAVPEQLCQLCIF*LLRMKF
Trigger: GAACTTCATCCGCAACAGCAAGAAGATGCAGAGCTG...ACACAGCTGCTCAGGAACAGCAGAAATAGTAAAACTCTTCCATGTATGTGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424536.2
CDS GCA 72 bp GAGGCCAGGCCCTGGGCCCTGTCACCCTGTGGCTGCTaGTTCCGCTGCCCTGCTGGGAGGTCAGGCGAGCCC +
Preference number: 6 (lower is better)
Translates to: EARPWALSPCGC*FRCPAGRSGEP
Trigger: GGGCTCGCCTGACCTCCCAGCAGGGCAGCGGAAGCAGCAGCCACAGGGTGACAGGGCCCAGGGCCTGGCCTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS GCA 72 bp GGCCCTGTCACCCTGTGGCTGCTGCTTCCGCTGCCCTaGTGGGAGGTCAGGCGAGCCCTGGGGACTGCCCTG +
Preference number: 6 (lower is better)
Translates to: GPVTLWLLLPLP*WEVRRALGTAL
Trigger: CAGGGCAGTCCCCAGGGCTCGCCTGACCTCCCAGCAGGGCAGCGGAAGCAGCAGCCACAGGGTGACAGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS CCA 72 bp GGGCGTGACATGGCCACGGCGCGAACCCACTGGGCTTaGCTCCTGGCTGCGGTCAGCTGCCCCCGAGGAGGT +
Preference number: 6 (lower is better)
Translates to: GRDMATARTHWA*LLAAVSCPRGG
Trigger: ACCTCCTCGGGGGCAGCTGACCGCAGCCAGGAGCCAAGCCCAGTGGGTTCGCGCCGTGGCCATGTCACGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000595596.1
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS CCA 72 bp GTTTGGGGGAGGCGGCCTGCTGAGCGGGGGACCGCGTaGTCCCGTCACCGGGTCCTCCGTCACCTTCTCGCT +
Preference number: 6 (lower is better)
Translates to: VWGRRPAERGTA*SRHRVLRHLLA
Trigger: AGCGAGAAGGTGACGGAGGACCCGGTGACGGGACCACGCGGTCCCCCGCTCAGCAGGCCGCCTCCCCCAAAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424536.2
ENST00000599476.1
CDS CCA 72 bp CCTGTCACCCTGTGGCTGCTGCTTCCGCTGCCCTGCTaGGAGGTCAGGCGAGCCCTGGGGACTGCCCTGTGC +
Preference number: 6 (lower is better)
Translates to: PVTLWLLLPLPC*EVRRALGTALC
Trigger: GCACAGGGCAGTCCCCAGGGCTCGCCTGACCTCCCAGCAGGGCAGCGGAAGCAGCAGCCACAGGGTGACAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS GCA 72 bp GCAGGAGCTGCAGCCGTTTCCGGAGCGATGGGGAGCTaGTTGGCGTGCTCCGGCCAGAGTGGGGTGTGGTGC +
Preference number: 6 (lower is better)
Translates to: AGAAAVSGAMGS*LACSGQSGVWC
Trigger: GCACCACACCCCACTCTGGCCGGAGCACGCCAAGCAGCTCCCCATCGCTCCGGAAACGGCTGCAGCTCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594597.5
ENST00000599564.5
CDS CCA 72 bp TGCTTCCGCTGCCCTGCTGGGAGGTCAGGCGAGCCCTaGGGACTGCCCTGTGCCAACAGGGTCTCCCAAGGC +
Preference number: 6 (lower is better)
Translates to: CFRCPAGRSGEP*GLPCANRVSQG
Trigger: GCCTTGGGAGACCCTGTTGGCACAGGGCAGTCCCCAGGGCTCGCCTGACCTCCCAGCAGGGCAGCGGAAGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS GCA 72 bp GCAGGAGCTGCAGCCGTTTCCGGAGCGATGGGGAGCTaGTTGGCGTGCTCCGGCCAGAGTGGGGTGTGGTGT +
Preference number: 6 (lower is better)
Translates to: AGAAAVSGAMGS*LACSGQSGVWC
Trigger: ACACCACACCCCACTCTGGCCGGAGCACGCCAAGCAGCTCCCCATCGCTCCGGAAACGGCTGCAGCTCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000424536.2
ENST00000600231.5
ENST00000680623.1
CDS CCA 72 bp AGCGATGGGGAGCTGCTTGGCGTGCTCCGGCCAGAGTaGGGTGTGGTGTCGAACATGGATGCGGCGCGGTGG +
Preference number: 6 (lower is better)
Translates to: SDGELLGVLRPE*GVVSNMDAARW
Trigger: CCACCGCGCCGCATCCATGTTCGACACCACACCCCACTCTGGCCGGAGCACGCCAAGCAGCTCCCCATCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000424536.2
ENST00000600231.5
ENST00000680623.1
CDS CCA 72 bp AGCGATGGGGAGCTGCTTGGCGTGCTCCGGCCAGAGTaGGGTGTGGTGCTGTCCTGGGACAGACTCTGCGGG +
Preference number: 6 (lower is better)
Translates to: SDGELLGVLRPE*GVVLSWDRLCG
Trigger: CCCGCAGAGTCTGTCCCAGGACAGCACCACACCCCACTCTGGCCGGAGCACGCCAAGCAGCTCCCCATCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS CCA 72 bp GAGCTGCAGCCGTTTCCGGAGCGATGGGGAGCTGCTTaGCGTGCTCCGGCCAGAGTGGGGTGTGGTGCTGTC +
Preference number: 6 (lower is better)
Translates to: ELQPFPERWGAA*RAPARVGCGAV
Trigger: GACAGCACCACACCCCACTCTGGCCGGAGCACGCCAAGCAGCTCCCCATCGCTCCGGAAACGGCTGCAGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS CCA 72 bp GAGCTGCAGCCGTTTCCGGAGCGATGGGGAGCTGCTTaGCGTGCTCCGGCCAGAGTGGGGTGTGGTGCTCAC +
Preference number: 6 (lower is better)
Translates to: ELQPFPERWGAA*RAPARVGCGAH
Trigger: GTGAGCACCACACCCCACTCTGGCCGGAGCACGCCAAGCAGCTCCCCATCGCTCCGGAAACGGCTGCAGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594597.5
CDS CAA 72 bp GGAGCTGCAGCCGTTTCCGGAGCGATGGGGAGCTGCTaGGCGTGCTCCGGCCAGAGTGGGGTGTGGTGTCGA +
Preference number: 6 (lower is better)
Translates to: GAAAVSGAMGSC*ACSGQSGVWCR
Trigger: TCGACACCACACCCCACTCTGGCCGGAGCACGCCAAGCAGCTCCCCATCGCTCCGGAAACGGCTGCAGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000424536.2
ENST00000600231.5
ENST00000680623.1
CDS CAA 72 bp GGAGCTGCAGCCGTTTCCGGAGCGATGGGGAGCTGCTaGGCGTGCTCCGGCCAGAGTGGGGTGTGGTGCTGT +
Preference number: 6 (lower is better)
Translates to: GAAAVSGAMGSC*ACSGQSGVWCC
Trigger: ACAGCACCACACCCCACTCTGGCCGGAGCACGCCAAGCAGCTCCCCATCGCTCCGGAAACGGCTGCAGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS CAA 72 bp GGAGCTGCAGCCGTTTCCGGAGCGATGGGGAGCTGCTaGGCGTGCTCCGGCCAGAGTGGGGTGTGGTGCTCA +
Preference number: 6 (lower is better)
Translates to: GAAAVSGAMGSC*ACSGQSGVWCS
Trigger: TGAGCACCACACCCCACTCTGGCCGGAGCACGCCAAGCAGCTCCCCATCGCTCCGGAAACGGCTGCAGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594597.5
CDS GCA 72 bp GCAGCCGTTTCCGGAGCGATGGGGAGCTGCTTGGCGTaGTCCGGCCAGAGTGGGGTGTGGTGTCGAACATGG +
Preference number: 6 (lower is better)
Translates to: AAVSGAMGSCLA*SGQSGVWCRTW
Trigger: CCATGTTCGACACCACACCCCACTCTGGCCGGAGCACGCCAAGCAGCTCCCCATCGCTCCGGAAACGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000424536.2
ENST00000600231.5
ENST00000680623.1
CDS CCA 72 bp CCACAAGGAGGCAGCCACGATCTCCCGCACCAGACCTaGCCTCAGCAAGCGGGGAATCCCCTGCTACAGCCC +
Preference number: 6 (lower is better)
Translates to: PQGGSHDLPHQT*PQQAGNPLLQP
Trigger: GGGCTGTAGCAGGGGATTCCCCGCTTGCTGAGGCCAGGTCTGGTGCGGGAGATCGTGGCTGCCTCCTTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595596.1
CDS GCA 72 bp CCGTCACCGGGTCCTCCGTCACCTTCTCGCTCTCCGTaGAGATCTGGATGGCGTTGGGGATCAGCTTGGCCG +
Preference number: 6 (lower is better)
Translates to: PSPGPPSPSRSP*RSGWRWGSAWP
Trigger: CGGCCAAGCTGATCCCCAACGCCATCCAGATCTGCACGGAGAGCGAGAAGGTGACGGAGGACCCGGTGACGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424536.2
ENST00000599476.1
CDS CCA 72 bp GAGCTGCAGCCGTTTCCGGAGCGATGGGGAGCTGCTTaGCGTGCTCCGGCCAGAGTGGGGTGTGGTGATAGT +
Preference number: 6 (lower is better)
Translates to: ELQPFPERWGAA*RAPARVGCGDS
Trigger: ACTATCACCACACCCCACTCTGGCCGGAGCACGCCAAGCAGCTCCCCATCGCTCCGGAAACGGCTGCAGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603669.5
CDS CCA 72 bp GCCGGAGAGGTCGGGAAGCAGGGCAGCCAAGTCCGCTaGAGACAGAGGAGAGCCGAGGATGATGACTGCCTC +
Preference number: 6 (lower is better)
Translates to: AGEVGKQGSQVR*RQRRAEDDDCL
Trigger: GAGGCAGTCATCATCCTCGGCTCTCCTCTGTCTCCAGCGGACTTGGCTGCCCTGCTTCCCGACCTCTCCGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598118.1
CDS TCA 72 bp TTGGCTCCTGGCTGCGGTCAGCTGCCCCCGAGGAGGTaGTGTCGCTCAGGGCGATCACATCTCCCACTTCCT +
Preference number: 6 (lower is better)
Translates to: LAPGCGQLPPRR*CRSGRSHLPLP
Trigger: AGGAAGTGGGAGATGTGATCGCCCTGAGCGACATCACCTCCTCGGGGGCAGCTGACCGCAGCCAGGAGCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000595596.1
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS CAA 90 bp CCCGAGGAGGTGATGTCGCTCAGGGCGATCACATCTCCCACTTCCTaGGGGGTCCTGTGGGAAAGGGGAGGAAGCGGGACTGCTGTGTCC +
Preference number: 6 (lower is better)
Translates to: PEEVMSLRAITSPTS*GVLWERGGSGTAVS
Trigger: GGACACAGCAGTCCCGCTTCCTCCCCTTTCCCACAGGACCCCCAAGGAAGTGGGAGATGTGATCGCCCTGAGCGACATCACCTCCTCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595596.1
CDS CAA 90 bp ACCTCATCCAGGAGCTCCACGGAGGCCCGCAGGATCTGCCTCCACTaGTGCACCTCCACGCTGTGGAATTGCTTCTGCAGCGCCAGGATC +
Preference number: 6 (lower is better)
Translates to: TSSRSSTEARRICLH*CTSTLWNCFCSARI
Trigger: GATCCTGGCGCTGCAGAAGCAATTCCACAGCGTGGAGGTGCACAAGTGGAGGCAGATCCTGCGGGCCTCCGTGGAGCTCCTGGATGAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603907.1
CDS TCA 72 bp ACTGACACAGAGCCCTCCTGTGACTCAGGGATGGGTTaGGGGTGGGCACGTGCTCCAGGCCCAGACAGACAG +
Preference number: 6 (lower is better)
Translates to: TDTEPSCDSGMG*GWARAPGPDRQ
Trigger: CTGTCTGTCTGGGCCTGGAGCACGTGCCCACCCTCAACCCATCCCTGAGTCACAGGAGGGCTCTGTGTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598118.1
CDS GCA 72 bp ACCTCATCCAGGAGCTCCACGGAGGCCCGCAGGATCTaGCTCCACTTGTGCACCTCCACGCTGTGGAATTGC +
Preference number: 6 (lower is better)
Translates to: TSSRSSTEARRI*LHLCTSTLWNC
Trigger: GCAATTCCACAGCGTGGAGGTGCACAAGTGGAGGCAGATCCTGCGGGCCTCCGTGGAGCTCCTGGATGAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603907.1
CDS CCA 72 bp CTGAGCGAGGCTTGCAAGTACCGGAGGCGAATGAATTaGGCCCGCCTGCCTCACCTTCCTCCCCAGTGGATG +
Preference number: 6 (lower is better)
Translates to: LSEACKYRRRMN*ARLPHLPPQWM
Trigger: CATCCACTGGGGAGGAAGGTGAGGCAGGCGGGCCCAATTCATTCGCCTCCGGTACTTGCAAGCCTCGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598362.1
CDS GCA 72 bp GCCCCTCCAGGGCCTGCGCCCAGGACTCAAACTTCCTaGTTCCCAAGTCCCCACAATACTCTGGCCAGAGAA +
Preference number: 6 (lower is better)
Translates to: APPGPAPRTQTS*FPSPHNTLARE
Trigger: TTCTCTGGCCAGAGTATTGTGGGGACTTGGGAAGCAGGAAGTTTGAGTCCTGGGCGCAGGCCCTGGAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595596.1
CDS CCA 72 bp GGGTCCTCCGTCACCTTCTCGCTCTCCGTGCAGATCTaGATGGCGTTGGGGATCAGCTTGGCCGTCTTTTCC +
Preference number: 6 (lower is better)
Translates to: GSSVTFSLSVQI*MALGISLAVFS
Trigger: GGAAAAGACGGCCAAGCTGATCCCCAACGCCATCCAGATCTGCACGGAGAGCGAGAAGGTGACGGAGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424536.2
ENST00000599476.1
CDS CAA 90 bp TGCTGCGGGCGAATCCATCCCCTCTTGCTTAAGACTGAGCGAGGCTaGCAAGTACCGGAGGCGAATGAATTGGGCCCGCCTGCCTCACCT +
Preference number: 6 (lower is better)
Translates to: CCGRIHPLLLKTERG*QVPEANELGPPASP
Trigger: AGGTGAGGCAGGCGGGCCCAATTCATTCGCCTCCGGTACTTGCAAGCCTCGCTCAGTCTTAAGCAAGAGGGGATGGATTCGCCCGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598362.1
CDS TCA 72 bp GCTGCAAGGGGGAGACATAGTCCTCATCCTCACTGGTaGGGCCCAGCTCTGAGCCGTAGCACTGATGCACCA +
Preference number: 6 (lower is better)
Translates to: AARGRHSPHPHW*GPALSRSTDAP
Trigger: TGGTGCATCAGTGCTACGGCTCAGAGCTGGGCCTCACCAGTGAGGATGAGGACTATGTCTCCCCCTTGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000595596.1
ENST00000598580.1
ENST00000599564.5
ENST00000680623.1
CDS TCA 72 bp CGGGGGACTCCCCATCACTGGATGGCGTTATGTGAATaGTGGGCACCTCCAGGAGCTTCCAGGACTCAGAGG +
Preference number: 6 (lower is better)
Translates to: RGTPHHWMALCE*WAPPGASRTQR
Trigger: CCTCTGAGTCCTGGAAGCTCCTGGAGGTGCCCATCATTCACATAACGCCATCCAGTGATGGGGAGTCCCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS TCA 72 bp CAGGCGGGGGACTCCCCATCACTGGATGGCGTTATGTaGATGATGGGCACCTCCAGGAGCTTCCAGGACTCA +
Preference number: 6 (lower is better)
Translates to: QAGDSPSLDGVM*MMGTSRSFQDS
Trigger: TGAGTCCTGGAAGCTCCTGGAGGTGCCCATCATTCACATAACGCCATCCAGTGATGGGGAGTCCCCCGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS GCA 72 bp AGATTTCTAGCAACAGCGCCTGAACGCCATCCCGCCTaGCCCTGGATTCTCAGTGCTGCGGGCGAATCCATC +
Preference number: 6 (lower is better)
Translates to: RFLATAPERHPA*PWILSAAGESI
Trigger: GATGGATTCGCCCGCAGCACTGAGAATCCAGGGGCAGGCGGGATGGCGTTCAGGCGCTGTTGCTAGAAATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598362.1
CDS GCA 72 bp TTACAGAGGAGGACACTGAGATCCGGAGAGGGGAAGTaGCTGCCGCACGGTGGGGTTTCAACACAGGACCCT +
Preference number: 6 (lower is better)
Translates to: LQRRTLRSGEGK*LPHGGVSTQDP
Trigger: AGGGTCCTGTGTTGAAACCCCACCGTGCGGCAGGCACTTCCCCTCTCCGGATCTCAGTGTCCTCCTCTGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603907.1
CDS CAA 72 bp GACCGTCCTGTTCTCCCCCGAACCCTTCAACCTCCTTaGACCTCCAACTCACCCCAGACCGTTCAGCTGCAA +
Preference number: 6 (lower is better)
Translates to: DRPVLPRTLQPP*TSNSPQTVQLQ
Trigger: TTGCAGCTGAACGGTCTGGGGTGAGTTGGAGGTCAAAGGAGGTTGAAGGGTTCGGGGGAGAACAGGACGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595596.1
ENST00000598580.1
CDS CAA 72 bp CACAGTGATTGGTTCAGGGGCAGGCACACTCTCAAGTaGGCCCAATCAGAGCCAACCCTAGGGTGTCCGCTG +
Preference number: 6 (lower is better)
Translates to: HSDWFRGRHTLK*AQSEPTLGCPL
Trigger: CAGCGGACACCCTAGGGTTGGCTCTGATTGGGCCAACTTGAGAGTGTGCCTGCCCCTGAACCAATCACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598118.1
CDS CAA 90 bp GGGTCCTCCGTCACCTTCTCGCTCTCCGTGCAGATCTGGATGGCGTaGGGGATCAGCTTGGCCGTCTTTTCCTTCTTCAGACATGTCACT +
Preference number: 6 (lower is better)
Translates to: GSSVTFSLSVQIWMA*GISLAVFSFFRHVT
Trigger: AGTGACATGTCTGAAGAAGGAAAAGACGGCCAAGCTGATCCCCAACGCCATCCAGATCTGCACGGAGAGCGAGAAGGTGACGGAGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424536.2
ENST00000599476.1
CDS TCA 72 bp GGGACTGCTGTGTCCTTGAGACCCCATACACCCTCCTaGATCCTCCAGACGTCATACAACCATCTCAGGCCC +
Preference number: 6 (lower is better)
Translates to: GTAVSLRPHTPS*ILQTSYNHLRP
Trigger: GGGCCTGAGATGGTTGTATGACGTCTGGAGGATTCAGGAGGGTGTATGGGGTCTCAAGGACACAGCAGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595596.1
ENST00000598580.1
CDS TCA 72 bp AGCATCAACCTAGGGGCACAGCAATTGGTTCAGGGGTaGGTGGGTGGCCCAGGTCTATCCGATCAACCACAG +
Preference number: 6 (lower is better)
Translates to: SINLGAQQLVQG*VGGPGLSDQPQ
Trigger: CTGTGGTTGATCGGATAGACCTGGGCCACCCACTCACCCCTGAACCAATTGCTGTGCCCCTAGGTTGATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598118.1
CDS GCA 72 bp GAATCCATCCCCTCTTGCTTAAGACTGAGCGAGGCTTaGAAGTACCGGAGGCGAATGAATTGGGCCCGCCTG +
Preference number: 6 (lower is better)
Translates to: ESIPSCLRLSEA*KYRRRMNWARL
Trigger: CAGGCGGGCCCAATTCATTCGCCTCCGGTACTTGCAAGCCTCGCTCAGTCTTAAGCAAGAGGGGATGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598362.1
CDS CCA 72 bp GGGTCTCCCAAGGCATCAGGGGCAGGACATCATCCATaGAGAGGGTCTGGAACAGCGGTGTGGTCTCTTATT +
Preference number: 6 (lower is better)
Translates to: GSPKASGAGHHP*RGSGTAVWSLI
Trigger: AATAAGAGACCACACCGCTGTTCCAGACCCTCTCCATGGATGATGTCCTGCCCCTGATGCCTTGGGAGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599564.5
CDS CCA 72 bp TGGGTGGCCCAGGTCTATCCGATCAACCACAGTGATTaGTTCAGGGGCAGGCACACTCTCAAGTTGGCCCAA +
Preference number: 6 (lower is better)
Translates to: WVAQVYPINHSD*FRGRHTLKLAQ
Trigger: TTGGGCCAACTTGAGAGTGTGCCTGCCCCTGAACCAATCACTGTGGTTGATCGGATAGACCTGGGCCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598118.1
CDS CCA 72 bp CCTAGGGGCACAGCAATTGGTTCAGGGGTGAGTGGGTaGCCCAGGTCTATCCGATCAACCACAGTGATTGGT +
Preference number: 6 (lower is better)
Translates to: PRGTAIGSGVSG*PRSIRSTTVIG
Trigger: ACCAATCACTGTGGTTGATCGGATAGACCTGGGCCACCCACTCACCCCTGAACCAATTGCTGTGCCCCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598118.1
CDS CAA 72 bp GTGGGGCTCAGCATACTGTACCAGCTCTGCATCTTCTaGCTGTTGCGGATGAAGTTCCGGCTGCCTAGGCTC +
Preference number: 6 (lower is better)
Translates to: VGLSILYQLCIF*LLRMKFRLPRL
Trigger: GAGCCTAGGCAGCCGGAACTTCATCCGCAACAGCAAGAAGATGCAGAGCTGGTACAGTATGCTGAGCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317991.10
ENST00000424536.2
ENST00000594597.5
ENST00000598073.5
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS CAA 72 bp CGAATCCATCCCCTCTTGCTTAAGACTGAGCGAGGCTaGCAAGTACCGGAGGCGAATGAATTGGGCCCGCCT +
Preference number: 6 (lower is better)
Translates to: RIHPLLLKTERG*QVPEANELGPP
Trigger: AGGCGGGCCCAATTCATTCGCCTCCGGTACTTGCAAGCCTCGCTCAGTCTTAAGCAAGAGGGGATGGATTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598362.1
CDS GCA 72 bp CTGCAGGGCGCAGGAGTAATCCACAATGAGGCGTTCTaGTTCGGGGAGTTTGCTGAACAGTTTCCGGAAGTC +
Preference number: 6 (lower is better)
Translates to: LQGAGVIHNEAF*FGEFAEQFPEV
Trigger: GACTTCCGGAAACTGTTCAGCAAACTCCCCGAAGCAGAACGCCTCATTGTGGATTACTCCTGCGCCCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000424536.2
ENST00000594597.5
ENST00000598073.5
ENST00000599476.1
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS CCA 72 bp TCACCTTCTCGCTCTCCGTGCAGATCTGGATGGCGTTaGGGATCAGCTTGGCCGTCTTTTCCTTCTTCAGAC +
Preference number: 6 (lower is better)
Translates to: SPSRSPCRSGWR*GSAWPSFPSSD
Trigger: GTCTGAAGAAGGAAAAGACGGCCAAGCTGATCCCCAACGCCATCCAGATCTGCACGGAGAGCGAGAAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424536.2
ENST00000599476.1
CDS CAA 72 bp CTCAGCATACTGTACCAGCTCTGCATCTTCTTGCTGTaGCGGATGAAGTTCCGGCTGCCTAGGCTCTGGGTG +
Preference number: 6 (lower is better)
Translates to: LSILYQLCIFLL*RMKFRLPRLWV
Trigger: CACCCAGAGCCTAGGCAGCCGGAACTTCATCCGCAACAGCAAGAAGATGCAGAGCTGGTACAGTATGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317991.10
ENST00000424536.2
ENST00000594597.5
ENST00000598073.5
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS CAA 72 bp GTCACCTTCTCGCTCTCCGTGCAGATCTGGATGGCGTaGGGGATCAGCTTGGCCGTCTTTTCCTTCTTCAGA +
Preference number: 6 (lower is better)
Translates to: VTFSLSVQIWMA*GISLAVFSFFR
Trigger: TCTGAAGAAGGAAAAGACGGCCAAGCTGATCCCCAACGCCATCCAGATCTGCACGGAGAGCGAGAAGGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424536.2
ENST00000599476.1
CDS CAA 72 bp GGATGTGAACCGCGGCAAGCTGCCTTCAGTCTGTGCTaGTGTTCACCCTGCCATGCTGCCTTCAAAACAGAG +
Preference number: 6 (lower is better)
Translates to: GCEPRQAAFSLC*CSPCHAAFKTE
Trigger: CTCTGTTTTGAAGGCAGCATGGCAGGGTGAACACAAGCACAGACTGAAGGCAGCTTGCCGCGGTTCACATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598362.1
CDS CAA 90 bp TGCTTCTCGCTCTCCGTGCAGATCTGGATGGCGTTGGGGATCAGCTaGGCCGTCTTTTCCTTCTTCAGACATGTCACTTCCTTCAGCTGG +
Preference number: 6 (lower is better)
Translates to: CFSLSVQIWMALGIS*AVFSFFRHVTSFSW
Trigger: CCAGCTGAAGGAAGTGACATGTCTGAAGAAGGAAAAGACGGCCAAGCTGATCCCCAACGCCATCCAGATCTGCACGGAGAGCGAGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS CAA 90 bp ACCTTCTCGCTCTCCGTGCAGATCTGGATGGCGTTGGGGATCAGCTaGGCCGTCTTTTCCTTCTTCAGACATGTCACTTCCTTCAGCTGG +
Preference number: 6 (lower is better)
Translates to: TFSLSVQIWMALGIS*AVFSFFRHVTSFSW
Trigger: CCAGCTGAAGGAAGTGACATGTCTGAAGAAGGAAAAGACGGCCAAGCTGATCCCCAACGCCATCCAGATCTGCACGGAGAGCGAGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424536.2
ENST00000599476.1
CDS CCA 72 bp AATGCTTCTCGCTCTCCGTGCAGATCTGGATGGCGTTaGGGATCAGCTTGGCCGTCTTTTCCTTCTTCAGAC +
Preference number: 6 (lower is better)
Translates to: NASRSPCRSGWR*GSAWPSFPSSD
Trigger: GTCTGAAGAAGGAAAAGACGGCCAAGCTGATCCCCAACGCCATCCAGATCTGCACGGAGAGCGAGAAGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS CCA 72 bp GAAGTGAAGAAATGCTTCTCGCTCTCCGTGCAGATCTaGATGGCGTTGGGGATCAGCTTGGCCGTCTTTTCC +
Preference number: 6 (lower is better)
Translates to: EVKKCFSLSVQI*MALGISLAVFS
Trigger: GGAAAAGACGGCCAAGCTGATCCCCAACGCCATCCAGATCTGCACGGAGAGCGAGAAGCATTTCTTCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS CAA 72 bp CTCTCCGTGCAGATCTGGATGGCGTTGGGGATCAGCTaGGCCGTCTTTTCCTTCTTCAGACATGTCACTTCC +
Preference number: 6 (lower is better)
Translates to: LSVQIWMALGIS*AVFSFFRHVTS
Trigger: GGAAGTGACATGTCTGAAGAAGGAAAAGACGGCCAAGCTGATCCCCAACGCCATCCAGATCTGCACGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000424536.2
ENST00000594597.5
ENST00000599476.1
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS CAA 72 bp AAATGCTTCTCGCTCTCCGTGCAGATCTGGATGGCGTaGGGGATCAGCTTGGCCGTCTTTTCCTTCTTCAGA +
Preference number: 6 (lower is better)
Translates to: KCFSLSVQIWMA*GISLAVFSFFR
Trigger: TCTGAAGAAGGAAAAGACGGCCAAGCTGATCCCCAACGCCATCCAGATCTGCACGGAGAGCGAGAAGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS CAA 90 bp GAAGTGAAGAAATGCTTCTCGCTCTCCGTGCAGATCTGGATGGCGTaGGGGATCAGCTTGGCCGTCTTTTCCTTCTTCAGACATGTCACT +
Preference number: 6 (lower is better)
Translates to: EVKKCFSLSVQIWMA*GISLAVFSFFRHVT
Trigger: AGTGACATGTCTGAAGAAGGAAAAGACGGCCAAGCTGATCCCCAACGCCATCCAGATCTGCACGGAGAGCGAGAAGCATTTCTTCACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317991.10
ENST00000411896.6
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS GCA 72 bp CAACGCACACAACACACCAGTAGCCACAATGACAGCTaGCATTTACAGATTTCTTATGTAAGCCGGGCCCCG +
Preference number: 6 (lower is better)
Translates to: QRTQHTSSHNDS*HLQISYVSRAP
Trigger: CGGGGCCCGGCTTACATAAGAAATCTGTAAATGGCAGCTGTCATTGTGGCTACTGGTGTGTTGTGTGCGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599476.1
CDS CCA 72 bp ACAGTTTCCGGAAGTCCTCATTACGCTGCTTATAAGTaGGGCTCAGCATACTGTACCAGCTCTGCATCTTCT +
Preference number: 6 (lower is better)
Translates to: TVSGSPHYAAYK*GSAYCTSSASS
Trigger: AGAAGATGCAGAGCTGGTACAGTATGCTGAGCCCCACTTATAAGCAGCGTAATGAGGACTTCCGGAAACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317991.10
ENST00000424536.2
ENST00000594597.5
ENST00000598073.5
ENST00000599564.5
ENST00000600231.5
ENST00000680623.1
CDS TCA 72 bp TGTGCTTGGTTCTGGGTGGAGAACACACCTAGGCCCTaGGATTTAAATCACAGGGATTCATTACCAGATAGC +
Preference number: 6 (lower is better)
Translates to: CAWFWVENTPRP*DLNHRDSLPDS
Trigger: GCTATCTGGTAATGAATCCCTGTGATTTAAATCTCAGGGCCTAGGTGTGTTCTCCACCCAGAACCAAGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598118.1
CDS GCA 72 bp TGCCTTCAGTCTGTGCTTGTGTTCACCCTGCCATGCTaGCTTCAAAACAGAGTAAAGACAGAGATTTCTAGC +
Preference number: 6 (lower is better)
Translates to: CLQSVLVFTLPC*LQNRVKTEISS
Trigger: GCTAGAAATCTCTGTCTTTACTCTGTTTTGAAGGCAGCATGGCAGGGTGAACACAAGCACAGACTGAAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598362.1