RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPX8 (Homo sapiens)

Ensembl gene IDs: ENSG00000164294

Ensembl transcript IDs: ENST00000296734.6, ENST00000502733.1, ENST00000503787.6, ENST00000506123.5, ENST00000511617.5, ENST00000514317.1, ENST00000515370.1

Found 284 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGACAGTCCTGGTTGTTCCCAGTGCAGCTCCATTATCATCCATCTaGCAGTGGGGAGTCTCTGCTGCCCATGTGGTGCTGGCATATGCA +
Preference number: 1 (lower is better)
Translates to: GTVLVVPSAAPLSSI*QWGVSAAHVVLAYA
Trigger: TGCATATGCCAGCACCACATGGGCAGCAGAGACTCCCCACTGCCAGATGGATGATAATGGAGCTGCACTGGGAACAACCAGGACTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR GCA 90 bp TCCCAGTGCAGCTCCATTATCATCCATCTGGCAGTGGGGAGTCTCTaGTGCCCATGTGGTGCTGGCATATGCAGTTCTGCTCATGCTCCT +
Preference number: 1 (lower is better)
Translates to: SQCSSIIIHLAVGSL*CPCGAGICSSAHAP
Trigger: AGGAGCATGAGCAGAACTGCATATGCCAGCACCACATGGGCAGCAGAGACTCCCCACTGCCAGATGGATGATAATGGAGCTGCACTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR TCA 90 bp GCCCATGTGGTGCTGGCATATGCAGTTCTGCTCATGCTCCTAACGTaGATGCATAAAACACCCCTGCAGTGCCACAGCACTGCTATGAGT +
Preference number: 1 (lower is better)
Translates to: AHVVLAYAVLLMLLT*MHKTPLQCHSTAMS
Trigger: ACTCATAGCAGTGCTGTGGCACTGCAGGGGTGTTTTATGCATTCACGTTAGGAGCATGAGCAGAACTGCATATGCCAGCACCACATGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR CCA 90 bp GGCGTAGGTGAGGATACAAGGCAAGAGTGCTCTGGCACCAACACTTaGAGGGGCCACCTGAGCATAAGTTTTCTTAGAGGCTCAGAATTC +
Preference number: 1 (lower is better)
Translates to: GVGEDTRQECSGTNT*RGHLSISFLRGSEF
Trigger: GAATTCTGAGCCTCTAAGAAAACTTATGCTCAGGTGGCCCCTCCAAGTGTTGGTGCCAGAGCACTCTTGCCTTGTATCCTCACCTACGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR GCA 90 bp TGCTATGAGTTCATGGAAGGCGTAGGTGAGGATACAAGGCAAGAGTaGTCTGGCACCAACACTTGGAGGGGCCACCTGAGCATAAGTTTT +
Preference number: 1 (lower is better)
Translates to: CYEFMEGVGEDTRQE*SGTNTWRGHLSISF
Trigger: AAAACTTATGCTCAGGTGGCCCCTCCAAGTGTTGGTGCCAGAGCACTCTTGCCTTGTATCCTCACCTACGCCTTCCATGAACTCATAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR TCA 90 bp TGCCTACTCTGCTTACCTAAAGGGCAAGGGGAGAAAATCCAGCACTaGCATAGAGTCTGTAGGTTGAATAAGGCAGCCAAGATTAGAGAG +
Preference number: 1 (lower is better)
Translates to: CLLCLPKGQGEKIQH*HRVCRLNKAAKIRE
Trigger: CTCTCTAATCTTGGCTGCCTTATTCAACCTACAGACTCTATGTCAGTGCTGGATTTTCTCCCCTTGCCCTTTAGGTAAGCAGAGTAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR CCA 90 bp AGAGCTAGTGACTTAAGGCAGGATGTTCATCTGTATCATGTTGACTaGGACAGTCCTGGTTGTTCCCAGTGCAGCTCCATTATCATCCAT +
Preference number: 1 (lower is better)
Translates to: RASDLRQDVHLYHVD*DSPGCSQCSSIIIH
Trigger: ATGGATGATAATGGAGCTGCACTGGGAACAACCAGGACTGTCCCAGTCAACATGATACAGATGAACATCCTGCCTTAAGTCACTAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR GCA 90 bp CTTTCTTTCAAGGCAATATGTATGACACGCTTTCAAATCTCCTCCTaGCTACTCTGCTTACCTAAAGGGCAAGGGGAGAAAATCCAGCAC +
Preference number: 1 (lower is better)
Translates to: LSFKAICMTRFQISS*LLCLPKGQGEKIQH
Trigger: GTGCTGGATTTTCTCCCCTTGCCCTTTAGGTAAGCAGAGTAGGCAGGAGGAGATTTGAAAGCGTGTCATACATATTGCCTTGAAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR CCA 90 bp TCCAATATAGGAAAGATTCAACTTTTCCTCTATGTGTTTGTCCGCTaGTATTCCTATGAGGCATTTGAGTTACAGGTAGCAGCACATCAG +
Preference number: 1 (lower is better)
Translates to: SNIGKIQLFLYVFVR*YSYEAFELQVAAHQ
Trigger: CTGATGTGCTGCTACCTGTAACTCAAATGCCTCATAGGAATACCAGCGGACAAACACATAGAGGAAAAGTTGAATCTTTCCTATATTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR CCA 90 bp ATTCCAGAAATTTCAGTCATACACAGTGCTCTTGAATCCAAAGAGTaGTCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTAGAAAAT +
Preference number: 1 (lower is better)
Translates to: IPEISVIHSALESKE*SSVLAFSSSTVLEN
Trigger: ATTTTCTAGGACTGTACTTGATGAAAATGCCAACACACTAGACCACTCTTTGGATTCAAGAGCACTGTGTATGACTGAAATTTCTGGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296734.6
ENST00000503787.6
ENST00000515370.1
3UTR CCA 90 bp TTTGCCATACGAAACATCTTCACTTTCATCCATCAGGTCAGAATTTaGGAGTCAAGTCACAGACTACTTAAATTGGGTCTTTTTCTTCTT +
Preference number: 1 (lower is better)
Translates to: FAIRNIFTFIHQVRI*ESSHRLLKLGLFLL
Trigger: AAGAAGAAAAAGACCCAATTTAAGTAGTCTGTGACTTGACTCCCAAATTCTGACCTGATGGATGAAAGTGAAGATGTTTCGTATGGCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR CCA 90 bp CATCTGGCAGTGGGGAGTCTCTGCTGCCCATGTGGTGCTGGCATATGCAGTTCTAAGGCAAGAGTGCTCTaGCACCAACACTTGGAGGGG +
Preference number: 2 (lower is better)
Translates to: HLAVGSLCCPCGAGICSSKARVL*HQHLEG
Trigger: CCCCTCCAAGTGTTGGTGCCAGAGCACTCTTGCCTT...AGAACTGCATATGCCAGCACCACATGGGCAGCAGAGACTCCCCACTGCCAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR TCA 90 bp GCAGTGGGGAGTCTCTGCTGCCCATGTGGTGCTGGCATATGCAGTTCTGCTCATCTCATCTGGCATTCTTaGGGCTATCCCTACAAATCC +
Preference number: 2 (lower is better)
Translates to: AVGSLCCPCGAGICSSAHLIWHS*GYPYKS
Trigger: GGATTTGTAGGGATAGCCTCAAGAATGCCAGATGAG...ATGAGCAGAACTGCATATGCCAGCACCACATGGGCAGCAGAGACTCCCCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR GCA 90 bp CGAGAGGTAGGAGCAGGCTTTCTGACACACTCATCTGGCATTCTTGAGGCTATCCTGAGAACGCACTACTaGACTCCAGCCTGGGTGACA +
Preference number: 2 (lower is better)
Translates to: REVGAGFLTHSSGILEAILRTHY*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCAGTAGTGCGTTCTCAG...GATAGCCTCAAGAATGCCAGATGAGTGTGTCAGAAAGCCTGCTCCTACCTCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR CCA 90 bp GAGGCATTTGAGTTACAGGTAGCAGCACATCAGCAAATGACTCCGCTCCCTCTCAAGGCAAGAGTGCTCTaGCACCAACACTTGGAGGGG +
Preference number: 2 (lower is better)
Translates to: EAFELQVAAHQQMTPLPLKARVL*HQHLEG
Trigger: CCCCTCCAAGTGTTGGTGCCAGAGCACTCTTGCCTT...GAGAGGGAGCGGAGTCATTTGCTGATGTGCTGCTACCTGTAACTCAAATGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR TCA 90 bp GCAGTGGGGAGTCTCTGCTGCCCATGTGGTGCTGGCATATGCAGTTCTGCTCATAGAATGATGCAGCATTaGATTCCTCCCAAGTGGCTA +
Preference number: 2 (lower is better)
Translates to: AVGSLCCPCGAGICSSAHRMMQH*IPPKWL
Trigger: TAGCCACTTGGGAGGAATTCAATGCTGCATCATTCT...ATGAGCAGAACTGCATATGCCAGCACCACATGGGCAGCAGAGACTCCCCACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR TCA 90 bp ACGCAGCTGGCGAGAGGTAGGAGCAGGCTTTCTGACACACTCATCTGGCATTCTAGAATGATGCAGCATTaGATTCCTCCCAAGTGGCTA +
Preference number: 2 (lower is better)
Translates to: TQLARGRSRLSDTLIWHSRMMQH*IPPKWL
Trigger: TAGCCACTTGGGAGGAATTCAATGCTGCATCATTCT...AGAATGCCAGATGAGTGTGTCAGAAAGCCTGCTCCTACCTCTCGCCAGCTGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR TCA 90 bp GAGGCATTTGAGTTACAGGTAGCAGCACATCAGCAAATGACTCCGCTCCCTCTCGCTGGATATGGACTCTaGAGCAGAAGATGCTTCATG +
Preference number: 2 (lower is better)
Translates to: EAFELQVAAHQQMTPLPLAGYGL*SRRCFM
Trigger: CATGAAGCATCTTCTGCTTCAGAGTCCATATCCAGC...GAGAGGGAGCGGAGTCATTTGCTGATGTGCTGCTACCTGTAACTCAAATGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR GCA 90 bp GGTAGCAGCACATCAGCAAATGACTCCGCTCCCTCTCTCAGCACACATAGCCTACTTTGGGAGAAGAAATaGCTTGTGACTCTAAGAGGT +
Preference number: 2 (lower is better)
Translates to: GSSTSANDSAPSLSTHSLLWEKK*LVTLRG
Trigger: ACCTCTTAGAGTCACAAGGCATTTCTTCTCCCAAAG...TAGGCTATGTGTGCTGAGAGAGGGAGCGGAGTCATTTGCTGATGTGCTGCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR CCA 90 bp CATCTGGCAGTGGGGAGTCTCTGCTGCCCATGTGGTGCTGGCATATGCAGTTCTCTATTAGAAACGCAATaGCATTCTCATAGATCCTCT +
Preference number: 2 (lower is better)
Translates to: HLAVGSLCCPCGAGICSSLLETQ*HSHRSS
Trigger: AGAGGATCTATGAGAATGCCATTGCGTTTCTAATAG...AGAACTGCATATGCCAGCACCACATGGGCAGCAGAGACTCCCCACTGCCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296734.6
3UTR-3UTR CCA 90 bp ATTTTTCTGTTACAGTCCTTAGCCCAGGCATCCTGTAGCACTCTGTGTCCCAGACCATTATCATCCATCTaGCAGTGGGGAGTCTCTGCT +
Preference number: 2 (lower is better)
Translates to: IFLLQSLAQASCSTLCPRPLSSI*QWGVSA
Trigger: AGCAGAGACTCCCCACTGCCAGATGGATGATAATGG...TCTGGGACACAGAGTGCTACAGGATGCCTGGGCTAAGGACTGTAACAGAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR GCA 90 bp TTTGTCCGCTGGTATTCCTATGAGGCATTTGAGTTACAGGTAGCAGCACATCAGTGCATAAAACACCCCTaGAGTGCCACAGCACTGCTA +
Preference number: 2 (lower is better)
Translates to: FVRWYSYEAFELQVAAHQCIKHP*SATALL
Trigger: TAGCAGTGCTGTGGCACTGCAGGGGTGTTTTATGCA...CTGATGTGCTGCTACCTGTAACTCAAATGCCTCATAGGAATACCAGCGGACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR CCA 90 bp GGTAGCAGCACATCAGCAAATGACTCCGCTCCCTCTCTCAGCACACATAGCCTACTTGAATCCAAAGAGTaGTCTAGTGTGTTGGCATTT +
Preference number: 2 (lower is better)
Translates to: GSSTSANDSAPSLSTHSLLESKE*SSVLAF
Trigger: AAATGCCAACACACTAGACCACTCTTTGGATTCAAG...TAGGCTATGTGTGCTGAGAGAGGGAGCGGAGTCATTTGCTGATGTGCTGCTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR CCA 90 bp GAGGCATTTGAGTTACAGGTAGCAGCACATCAGCAAATGACTCCGCTCCCTCTCAAATACATTCATAGCTaGGTGGCTGGATATGGACTC +
Preference number: 2 (lower is better)
Translates to: EAFELQVAAHQQMTPLPLKYIHS*VAGYGL
Trigger: GAGTCCATATCCAGCCACCCAGCTATGAATGTATTT...GAGAGGGAGCGGAGTCATTTGCTGATGTGCTGCTACCTGTAACTCAAATGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR CCA 90 bp TTCAAGGCAATATGTATGACACGCTTTCAAATCTCCTCCTGCCTACTCTGCTTATCTGGCACCAACACTTaGAGGGGCCACCTGAGCATA +
Preference number: 2 (lower is better)
Translates to: FKAICMTRFQISSCLLCLSGTNT*RGHLSI
Trigger: TATGCTCAGGTGGCCCCTCCAAGTGTTGGTGCCAGA...TAAGCAGAGTAGGCAGGAGGAGATTTGAAAGCGTGTCATACATATTGCCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR CAA 90 bp GTTCAATTTACAGGTGAGGAAACTGAAATAAGGTACTTAAGTGACTaGCCTAAAGTCACGCAGCTGGCGAGAGGTAGGAGCAGGCTTTCT +
Preference number: 2 (lower is better)
Translates to: VQFTGEETEIRYLSD*PKVTQLARGRSRLS
Trigger: AGAAAGCCTGCTCCTACCTCTCGCCAGCTGCGTGACTTTAGGCAAGTCACTTAAGTACCTTATTTCAGTTTCCTCACCTGTAAATTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR TCA 90 bp GAGGCATTTGAGTTACAGGTAGCAGCACATCAGCAAATGACTCCGCTCCCTCTCTTCTTTGGCTACTCTTaGTTTTTGCTTTGGGTAACA +
Preference number: 2 (lower is better)
Translates to: EAFELQVAAHQQMTPLPLFFGYS*FLLWVT
Trigger: TGTTACCCAAAGCAAAAATCAAGAGTAGCCAAAGAA...GAGAGGGAGCGGAGTCATTTGCTGATGTGCTGCTACCTGTAACTCAAATGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR GCA 90 bp CAGTTATTCCAGAAATTTCAGTCATACACAGTGCTCTTGAATCCAAAGAGTGGTCTGAGAACGCACTACTaGACTCCAGCCTGGGTGACA +
Preference number: 2 (lower is better)
Translates to: QLFQKFQSYTVLLNPKSGLRTHY*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCAGTAGTGCGTTCTCAG...ACCACTCTTTGGATTCAAGAGCACTGTGTATGACTGAAATTTCTGGAATAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296734.6
ENST00000503787.6
ENST00000515370.1
3UTR-3UTR GCA 90 bp TTCAAGGCAATATGTATGACACGCTTTCAAATCTCCTCCTGCCTACTCTGCTTATGTGGTGCTGGCATATaGAGTTCTGCTCATGCTCCT +
Preference number: 2 (lower is better)
Translates to: FKAICMTRFQISSCLLCLCGAGI*SSAHAP
Trigger: AGGAGCATGAGCAGAACTGCATATGCCAGCACCACA...TAAGCAGAGTAGGCAGGAGGAGATTTGAAAGCGTGTCATACATATTGCCTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR GCA 90 bp TTTGTCCGCTGGTATTCCTATGAGGCATTTGAGTTACAGGTAGCAGCACATCAGCTTTGGGAGAAGAAATaGCTTGTGACTCTAAGAGGT +
Preference number: 2 (lower is better)
Translates to: FVRWYSYEAFELQVAAHQLWEKK*LVTLRG
Trigger: ACCTCTTAGAGTCACAAGGCATTTCTTCTCCCAAAG...CTGATGTGCTGCTACCTGTAACTCAAATGCCTCATAGGAATACCAGCGGACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR TCA 90 bp GCAGGCTTTCTGACACACTCATCTGGCATTCTTGAGGCTATCCCTACAAATCCTACTTTAGGACTTGTATaGTCACCCCCTTTTTATACT +
Preference number: 2 (lower is better)
Translates to: AGFLTHSSGILEAIPTNPTLGLV*SPPFYT
Trigger: AGTATAAAAAGGGGGTGATCATACAAGTCCTAAAGT...AGGATTTGTAGGGATAGCCTCAAGAATGCCAGATGAGTGTGTCAGAAAGCCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR TCA 90 bp GTTGCAAAGGGCTTTTTATTCCATTCAACCCCTGTTCAATTTACAGGTGAGGAAGCTGGATATGGACTCTaGAGCAGAAGATGCTTCATG +
Preference number: 2 (lower is better)
Translates to: VAKGFLFHSTPVQFTGEEAGYGL*SRRCFM
Trigger: CATGAAGCATCTTCTGCTTCAGAGTCCATATCCAGC...TTCCTCACCTGTAAATTGAACAGGGGTTGAATGGAATAAAAAGCCCTTTGCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR TCA 90 bp GTTGCAAAGGGCTTTTTATTCCATTCAACCCCTGTTCAATTTACAGGTGAGGAACTCATCTGGCATTCTTaGGGCTATCCCTACAAATCC +
Preference number: 2 (lower is better)
Translates to: VAKGFLFHSTPVQFTGEELIWHS*GYPYKS
Trigger: GGATTTGTAGGGATAGCCTCAAGAATGCCAGATGAG...TTCCTCACCTGTAAATTGAACAGGGGTTGAATGGAATAAAAAGCCCTTTGCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR TCA 90 bp TTTGTCCGCTGGTATTCCTATGAGGCATTTGAGTTACAGGTAGCAGCACATCAGTCAAGGCAATATGTATaGCACGCTTTCAAATCTCCT +
Preference number: 2 (lower is better)
Translates to: FVRWYSYEAFELQVAAHQSRQYV*HAFKSP
Trigger: AGGAGATTTGAAAGCGTGTCATACATATTGCCTTGA...CTGATGTGCTGCTACCTGTAACTCAAATGCCTCATAGGAATACCAGCGGACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR TCA 90 bp ATTTTTCTGTTACAGTCCTTAGCCCAGGCATCCTGTAGCACTCTGTGTCCCAGAATGCAGAAACAAGACTaGAGGAAGATTGTCCAATAT +
Preference number: 2 (lower is better)
Translates to: IFLLQSLAQASCSTLCPRMQKQD*RKIVQY
Trigger: ATATTGGACAATCTTCCTTCAGTCTTGTTTCTGCAT...TCTGGGACACAGAGTGCTACAGGATGCCTGGGCTAAGGACTGTAACAGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR CCA 90 bp TTTGTCCGCTGGTATTCCTATGAGGCATTTGAGTTACAGGTAGCAGCACATCAGGTAACATCCTCATCCTaGGAACATTCATTACCACTT +
Preference number: 2 (lower is better)
Translates to: FVRWYSYEAFELQVAAHQVTSSS*EHSLPL
Trigger: AAGTGGTAATGAATGTTCCCAGGATGAGGATGTTAC...CTGATGTGCTGCTACCTGTAACTCAAATGCCTCATAGGAATACCAGCGGACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR TCA 90 bp CTAAATACATTCATAGCTGGGTGGCTGGATATGGACTCTGAAGCAGAAGATGCTTTTCAGCTATCAGAATaGTGCAGCATTGAATTCCTC +
Preference number: 2 (lower is better)
Translates to: LNTFIAGWLDMDSEAEDAFQLSE*CSIEFL
Trigger: GAGGAATTCAATGCTGCATCATTCTGATAGCTGAAA...AGCATCTTCTGCTTCAGAGTCCATATCCAGCCACCCAGCTATGAATGTATTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR GCA 90 bp GTAACATCCTCATCCTGGGAACATTCATTACCACTTAATAGCAAGATAACATTATTGTCTAACCAGAGCTaGTATGTCAGGCCTGATGAC +
Preference number: 2 (lower is better)
Translates to: VTSSSWEHSLPLNSKITLLSNQS*YVRPDD
Trigger: GTCATCAGGCCTGACATAGCAGCTCTGGTTAGACAA...TAATGTTATCTTGCTATTAAGTGGTAATGAATGTTCCCAGGATGAGGATGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296734.6
3UTR-3UTR TCA 90 bp GTTGCAAAGGGCTTTTTATTCCATTCAACCCCTGTTCAATTTACAGGTGAGGAATTCTTTGGCTACTCTTaGTTTTTGCTTTGGGTAACA +
Preference number: 2 (lower is better)
Translates to: VAKGFLFHSTPVQFTGEEFFGYS*FLLWVT
Trigger: TGTTACCCAAAGCAAAAATCAAGAGTAGCCAAAGAA...TTCCTCACCTGTAAATTGAACAGGGGTTGAATGGAATAAAAAGCCCTTTGCAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR CCA 90 bp TCCAAAGAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTAGAAAATGTAACATCCTCATCCTaGGAACATTCATTACCACTT +
Preference number: 2 (lower is better)
Translates to: SKEWSSVLAFSSSTVLENVTSSS*EHSLPL
Trigger: AAGTGGTAATGAATGTTCCCAGGATGAGGATGTTAC...ATTTTCTAGGACTGTACTTGATGAAAATGCCAACACACTAGACCACTCTTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296734.6
ENST00000503787.6
ENST00000515370.1
3UTR CAA 90 bp CCAAATACGTATACAGAACTATATACTGAGGTAGCATTACTGAATTaGCCATACGAAACATCTTCACTTTCATCCATCAGGTCAGAATTT +
Preference number: 2 (lower is better)
Translates to: PNTYTELYTEVALLN*PYETSSLSSIRSEF
Trigger: AAATTCTGACCTGATGGATGAAAGTGAAGATGTTTCGTATGGCAAATTCAGTAATGCTACCTCAGTATATAGTTCTGTATACGTATTTGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR GCA 72 bp TTCATGGAAGGCGTAGGTGAGGATACAAGGCAAGAGTaGTCTGGCACCAACACTTGGAGGGGCCACCTGAGC +
Preference number: 3 (lower is better)
Translates to: FMEGVGEDTRQE*SGTNTWRGHLS
Trigger: GCTCAGGTGGCCCCTCCAAGTGTTGGTGCCAGAGCACTCTTGCCTTGTATCCTCACCTACGCCTTCCATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR GCA 72 bp AGCTCCATTATCATCCATCTGGCAGTGGGGAGTCTCTaGTGCCCATGTGGTGCTGGCATATGCAGTTCTGCT +
Preference number: 3 (lower is better)
Translates to: SSIIIHLAVGSL*CPCGAGICSSA
Trigger: AGCAGAACTGCATATGCCAGCACCACATGGGCAGCAGAGACTCCCCACTGCCAGATGGATGATAATGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR CCA 72 bp GAGGATACAAGGCAAGAGTGCTCTGGCACCAACACTTaGAGGGGCCACCTGAGCATAAGTTTTCTTAGAGGC +
Preference number: 3 (lower is better)
Translates to: EDTRQECSGTNT*RGHLSISFLRG
Trigger: GCCTCTAAGAAAACTTATGCTCAGGTGGCCCCTCCAAGTGTTGGTGCCAGAGCACTCTTGCCTTGTATCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR CAA 90 bp GCAGTGGGGAGTCTCTGCTGCCCATGTGGTGCTGGCATATGCAGTTCTGCTCATGGCTCAGAATTCAAATaGCTAATAGGCTCTTGGAGC +
Preference number: 3 (lower is better)
Translates to: AVGSLCCPCGAGICSSAHGSEFK*LIGSWS
Trigger: GCTCCAAGAGCCTATTAGCAATTTGAATTCTGAGCC...ATGAGCAGAACTGCATATGCCAGCACCACATGGGCAGCAGAGACTCCCCACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR CAA 90 bp TTTGTCCGCTGGTATTCCTATGAGGCATTTGAGTTACAGGTAGCAGCACATCAGCTGGGACAGTCCTGGTaGTTCCCAGTGCAGCTCCAT +
Preference number: 3 (lower is better)
Translates to: FVRWYSYEAFELQVAAHQLGQSW*FPVQLH
Trigger: ATGGAGCTGCACTGGGAACAACCAGGACTGTCCCAG...CTGATGTGCTGCTACCTGTAACTCAAATGCCTCATAGGAATACCAGCGGACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR TCA 72 bp GTGCTGGCATATGCAGTTCTGCTCATGCTCCTAACGTaGATGCATAAAACACCCCTGCAGTGCCACAGCACT +
Preference number: 3 (lower is better)
Translates to: VLAYAVLLMLLT*MHKTPLQCHST
Trigger: AGTGCTGTGGCACTGCAGGGGTGTTTTATGCATTCACGTTAGGAGCATGAGCAGAACTGCATATGCCAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR GCA 72 bp TATCATGTTGACTGGGACAGTCCTGGTTGTTCCCAGTaGAGCTCCATTATCATCCATCTGGCAGTGGGGAGT +
Preference number: 3 (lower is better)
Translates to: YHVDWDSPGCSQ*SSIIIHLAVGS
Trigger: ACTCCCCACTGCCAGATGGATGATAATGGAGCTGCACTGGGAACAACCAGGACTGTCCCAGTCAACATGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR CAA 90 bp GGTAGCAGCACATCAGCAAATGACTCCGCTCCCTCTCTCAGCACACATAGCCTAACTCATCTGGCATTCTaGAGGCTATCCCTACAAATC +
Preference number: 3 (lower is better)
Translates to: GSSTSANDSAPSLSTHSLTHLAF*RLSLQI
Trigger: GATTTGTAGGGATAGCCTCAAGAATGCCAGATGAGT...TAGGCTATGTGTGCTGAGAGAGGGAGCGGAGTCATTTGCTGATGTGCTGCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR CAA 90 bp GAGGCATTTGAGTTACAGGTAGCAGCACATCAGCAAATGACTCCGCTCCCTCTCAGGTACTTAAGTGACTaGCCTAAAGTCACGCAGCTG +
Preference number: 3 (lower is better)
Translates to: EAFELQVAAHQQMTPLPLRYLSD*PKVTQL
Trigger: CAGCTGCGTGACTTTAGGCAAGTCACTTAAGTACCT...GAGAGGGAGCGGAGTCATTTGCTGATGTGCTGCTACCTGTAACTCAAATGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR CAA 90 bp GAGGCATTTGAGTTACAGGTAGCAGCACATCAGCAAATGACTCCGCTCCCTCTCCCACTTTATCTGGCTTaGGAGAGAGCTAGTGACTTA +
Preference number: 3 (lower is better)
Translates to: EAFELQVAAHQQMTPLPLPLYLA*ERASDL
Trigger: TAAGTCACTAGCTCTCTCCAAAGCCAGATAAAGTGG...GAGAGGGAGCGGAGTCATTTGCTGATGTGCTGCTACCTGTAACTCAAATGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR GCA 72 bp TGTATGACACGCTTTCAAATCTCCTCCTGCCTACTCTaGTTACCTAAAGGGCAAGGGGAGAAAATCCAGCAC +
Preference number: 3 (lower is better)
Translates to: CMTRFQISSCLL*LPKGQGEKIQH
Trigger: GTGCTGGATTTTCTCCCCTTGCCCTTTAGGTAAGCAGAGTAGGCAGGAGGAGATTTGAAAGCGTGTCATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR CCA 72 bp GACTTAAGGCAGGATGTTCATCTGTATCATGTTGACTaGGACAGTCCTGGTTGTTCCCAGTGCAGCTCCATT +
Preference number: 3 (lower is better)
Translates to: DLRQDVHLYHVD*DSPGCSQCSSI
Trigger: AATGGAGCTGCACTGGGAACAACCAGGACTGTCCCAGTCAACATGATACAGATGAACATCCTGCCTTAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR CAA 90 bp GAGGCATTTGAGTTACAGGTAGCAGCACATCAGCAAATGACTCCGCTCCCTCTCTCATACACAGTGCTCTaGAATCCAAAGAGTGGTCTA +
Preference number: 3 (lower is better)
Translates to: EAFELQVAAHQQMTPLPLSYTVL*NPKSGL
Trigger: TAGACCACTCTTTGGATTCAAGAGCACTGTGTATGA...GAGAGGGAGCGGAGTCATTTGCTGATGTGCTGCTACCTGTAACTCAAATGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR TCA 72 bp TGCTTACCTAAAGGGCAAGGGGAGAAAATCCAGCACTaGCATAGAGTCTGTAGGTTGAATAAGGCAGCCAAG +
Preference number: 3 (lower is better)
Translates to: CLPKGQGEKIQH*HRVCRLNKAAK
Trigger: CTTGGCTGCCTTATTCAACCTACAGACTCTATGTCAGTGCTGGATTTTCTCCCCTTGCCCTTTAGGTAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR CAA 90 bp ATTTTTCTGTTACAGTCCTTAGCCCAGGCATCCTGTAGCACTCTGTGTCCCAGACATAGAGTCTGTAGGTaGAATAAGGCAGCCAAGATT +
Preference number: 3 (lower is better)
Translates to: IFLLQSLAQASCSTLCPRHRVCR*NKAAKI
Trigger: AATCTTGGCTGCCTTATTCAACCTACAGACTCTATG...TCTGGGACACAGAGTGCTACAGGATGCCTGGGCTAAGGACTGTAACAGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR CAA 90 bp TTCAAGGCAATATGTATGACACGCTTTCAAATCTCCTCCTGCCTACTCTGCTTAAAAGGACAGATAGGCTaGTTGGTGGCTTCTGTTTTC +
Preference number: 3 (lower is better)
Translates to: FKAICMTRFQISSCLLCLKGQIG*LVASVF
Trigger: GAAAACAGAAGCCACCAACAAGCCTATCTGTCCTTT...TAAGCAGAGTAGGCAGGAGGAGATTTGAAAGCGTGTCATACATATTGCCTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR CAA 90 bp CAGTTATTCCAGAAATTTCAGTCATACACAGTGCTCTTGAATCCAAAGAGTGGTCTCTTGATTTTTGCTTaGGGTAACATCCTCATCCTG +
Preference number: 3 (lower is better)
Translates to: QLFQKFQSYTVLLNPKSGLLIFA*GNILIL
Trigger: CAGGATGAGGATGTTACCCAAAGCAAAAATCAAGAG...ACCACTCTTTGGATTCAAGAGCACTGTGTATGACTGAAATTTCTGGAATAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296734.6
ENST00000503787.6
ENST00000515370.1
3UTR-3UTR CAA 90 bp TTCAAGGCAATATGTATGACACGCTTTCAAATCTCCTCCTGCCTACTCTGCTTAATTCTTTGGCTACTCTaGATTTTTGCTTTGGGTAAC +
Preference number: 3 (lower is better)
Translates to: FKAICMTRFQISSCLLCLILWLL*IFALGN
Trigger: GTTACCCAAAGCAAAAATCAAGAGTAGCCAAAGAAT...TAAGCAGAGTAGGCAGGAGGAGATTTGAAAGCGTGTCATACATATTGCCTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR CCA 72 bp CGAAACATCTTCACTTTCATCCATCAGGTCAGAATTTaGGAGTCAAGTCACAGACTACTTAAATTGGGTCTT +
Preference number: 3 (lower is better)
Translates to: RNIFTFIHQVRI*ESSHRLLKLGL
Trigger: AAGACCCAATTTAAGTAGTCTGTGACTTGACTCCCAAATTCTGACCTGATGGATGAAAGTGAAGATGTTTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR CAA 90 bp TATACTGAGGTAGCATTACTGAATTTGCCATACGAAACATCTTCACTTTCATCCCTCTTGATTTTTGCTTaGGGTAACATCCTCATCCTG +
Preference number: 3 (lower is better)
Translates to: YTEVALLNLPYETSSLSSLLIFA*GNILIL
Trigger: CAGGATGAGGATGTTACCCAAAGCAAAAATCAAGAG...GGATGAAAGTGAAGATGTTTCGTATGGCAAATTCAGTAATGCTACCTCAGTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR CAA 90 bp TACACAGTGCTCTTGAATCCAAAGAGTGGTCTAGTGTGTTGGCATTTTCATCAAATTCTTTGGCTACTCTaGATTTTTGCTTTGGGTAAC +
Preference number: 3 (lower is better)
Translates to: YTVLLNPKSGLVCWHFHQILWLL*IFALGN
Trigger: GTTACCCAAAGCAAAAATCAAGAGTAGCCAAAGAAT...TTGATGAAAATGCCAACACACTAGACCACTCTTTGGATTCAAGAGCACTGTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296734.6
ENST00000503787.6
ENST00000515370.1
3UTR-3UTR CAA 90 bp TATACTGAGGTAGCATTACTGAATTTGCCATACGAAACATCTTCACTTTCATCCTTAACCTTCACCAACTaGGCAGGTTGCTTTGTTAGT +
Preference number: 3 (lower is better)
Translates to: YTEVALLNLPYETSSLSSLTFTN*AGCFVS
Trigger: ACTAACAAAGCAACCTGCCAAGTTGGTGAAGGTTAA...GGATGAAAGTGAAGATGTTTCGTATGGCAAATTCAGTAATGCTACCTCAGTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR CAA 90 bp TATACTGAGGTAGCATTACTGAATTTGCCATACGAAACATCTTCACTTTCATCCACTTGGCAGGTTGCTTaGTTAGTCAATTATAAGGCT +
Preference number: 3 (lower is better)
Translates to: YTEVALLNLPYETSSLSSTWQVA*LVNYKA
Trigger: AGCCTTATAATTGACTAACAAAGCAACCTGCCAAGT...GGATGAAAGTGAAGATGTTTCGTATGGCAAATTCAGTAATGCTACCTCAGTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR-3UTR CAA 90 bp CTATATACTGAGGTAGCATTACTGAATTTGCCATACGAAACATCTTCACTTTCATTAACCTTCACCAACTaGGCAGGTTGCTTTGTTAGT +
Preference number: 3 (lower is better)
Translates to: LYTEVALLNLPYETSSLSLTFTN*AGCFVS
Trigger: ACTAACAAAGCAACCTGCCAAGTTGGTGAAGGTTAA...TGAAAGTGAAGATGTTTCGTATGGCAAATTCAGTAATGCTACCTCAGTATATAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR TCA 90 bp GACTTGCCTAAAGTCACGCAGCTGGCGAGAGGTAGGAGCAGGCTTTCTGACACAGCCACAGCACTGCTATaGGTTCATGGAAGGCGTAGG +
Preference number: 4 (lower is better)
Translates to: DLPKVTQLARGRSRLSDTATALL*VHGRRR
Trigger: CCTACGCCTTCCATGAACTCATAGCAGTGCTGTGGC...TGTGTCAGAAAGCCTGCTCCTACCTCTCGCCAGCTGCGTGACTTTAGGCAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp GCAGTGGGGAGTCTCTGCTGCCCATGTGGTGCTGGCATATGCAGTTCTGCTCATGCAGTGCCACAGCACTaGTATGAGTTCATGGAAGGC +
Preference number: 4 (lower is better)
Translates to: AVGSLCCPCGAGICSSAHAVPQH*YEFMEG
Trigger: GCCTTCCATGAACTCATAGCAGTGCTGTGGCACTGC...ATGAGCAGAACTGCATATGCCAGCACCACATGGGCAGCAGAGACTCCCCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp CATCTGGCAGTGGGGAGTCTCTGCTGCCCATGTGGTGCTGGCATATGCAGTTCTCTGCCCATGTGGTGCTaGCATATGCAGTTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: HLAVGSLCCPCGAGICSSLPMWC*HMQFCS
Trigger: TGAGCAGAACTGCATATGCCAGCACCACATGGGCAG...AGAACTGCATATGCCAGCACCACATGGGCAGCAGAGACTCCCCACTGCCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR TCA 90 bp GGTAGCAGCACATCAGCAAATGACTCCGCTCCCTCTCTCAGCACACATAGCCTACAGCACATCAGCAAATaGCTCCGCTCCCTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: GSSTSANDSAPSLSTHSLQHISK*LRSLSQ
Trigger: CTGAGAGAGGGAGCGGAGTCATTTGCTGATGTGCTG...TAGGCTATGTGTGCTGAGAGAGGGAGCGGAGTCATTTGCTGATGTGCTGCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp GCAGTGGGGAGTCTCTGCTGCCCATGTGGTGCTGGCATATGCAGTTCTGCTCATTGTGGTGCTGGCATATaGAGTTCTGCTCATGCTCCT +
Preference number: 4 (lower is better)
Translates to: AVGSLCCPCGAGICSSAHCGAGI*SSAHAP
Trigger: AGGAGCATGAGCAGAACTGCATATGCCAGCACCACA...ATGAGCAGAACTGCATATGCCAGCACCACATGGGCAGCAGAGACTCCCCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp CATCTGGCAGTGGGGAGTCTCTGCTGCCCATGTGGTGCTGGCATATGCAGTTCTCTGGGTGGCTGGATATaGACTCTGAAGCAGAAGATG +
Preference number: 4 (lower is better)
Translates to: HLAVGSLCCPCGAGICSSLGGWI*TLKQKM
Trigger: CATCTTCTGCTTCAGAGTCCATATCCAGCCACCCAG...AGAACTGCATATGCCAGCACCACATGGGCAGCAGAGACTCCCCACTGCCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp CATCTGGCAGTGGGGAGTCTCTGCTGCCCATGTGGTGCTGGCATATGCAGTTCTCAGGTTGGAGTGCAGTaGTGCAATCTTGGCTCATTG +
Preference number: 4 (lower is better)
Translates to: HLAVGSLCCPCGAGICSSQVGVQ*CNLGSL
Trigger: CAATGAGCCAAGATTGCACCACTGCACTCCAACCTG...AGAACTGCATATGCCAGCACCACATGGGCAGCAGAGACTCCCCACTGCCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp GAGGCATTTGAGTTACAGGTAGCAGCACATCAGCAAATGACTCCGCTCCCTCTCCTGAGAACGCACTACTaGACTCCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: EAFELQVAAHQQMTPLPLLRTHY*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCAGTAGTGCGTTCTCAG...GAGAGGGAGCGGAGTCATTTGCTGATGTGCTGCTACCTGTAACTCAAATGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp GGTAGCAGCACATCAGCAAATGACTCCGCTCCCTCTCTCAGCACACATAGCCTATCCTCCTGCCTACTCTaGTTACCTAAAGGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: GSSTSANDSAPSLSTHSLSSCLL*LPKGQG
Trigger: CCCTTGCCCTTTAGGTAAGCAGAGTAGGCAGGAGGA...TAGGCTATGTGTGCTGAGAGAGGGAGCGGAGTCATTTGCTGATGTGCTGCTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp CATCTGGCAGTGGGGAGTCTCTGCTGCCCATGTGGTGCTGGCATATGCAGTTCTTTCAATGGGCTCCTCTaGCTTCCAGAACTTCACAAC +
Preference number: 4 (lower is better)
Translates to: HLAVGSLCCPCGAGICSSFNGLL*LPELHN
Trigger: GTTGTGAAGTTCTGGAAGCCAGAGGAGCCCATTGAA...AGAACTGCATATGCCAGCACCACATGGGCAGCAGAGACTCCCCACTGCCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR TCA 90 bp CATCTGGCAGTGGGGAGTCTCTGCTGCCCATGTGGTGCTGGCATATGCAGTTCTAGAATGATGCAGCATTaGATTCCTCCCAAGTGGCTA +
Preference number: 4 (lower is better)
Translates to: HLAVGSLCCPCGAGICSSRMMQH*IPPKWL
Trigger: TAGCCACTTGGGAGGAATTCAATGCTGCATCATTCT...AGAACTGCATATGCCAGCACCACATGGGCAGCAGAGACTCCCCACTGCCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp ACGCAGCTGGCGAGAGGTAGGAGCAGGCTTTCTGACACACTCATCTGGCATTCTGGTCCAAACTCTTTGTaGAGTTCCTTCAGCCCTAAG +
Preference number: 4 (lower is better)
Translates to: TQLARGRSRLSDTLIWHSGPNSL*SSFSPK
Trigger: CTTAGGGCTGAAGGAACTGCACAAAGAGTTTGGACC...AGAATGCCAGATGAGTGTGTCAGAAAGCCTGCTCCTACCTCTCGCCAGCTGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503787.6
CDS-3UTR TCA 90 bp GACTTGCCTAAAGTCACGCAGCTGGCGAGAGGTAGGAGCAGGCTTTCTGACACAGAGAAAATCCAGCACTaGCATAGAGTCTGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: DLPKVTQLARGRSRLSDTEKIQH*HRVCRL
Trigger: CAACCTACAGACTCTATGTCAGTGCTGGATTTTCTC...TGTGTCAGAAAGCCTGCTCCTACCTCTCGCCAGCTGCGTGACTTTAGGCAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp GAGGCATTTGAGTTACAGGTAGCAGCACATCAGCAAATGACTCCGCTCCCTCTCGATACAAGGCAAGAGTaGTCTGGCACCAACACTTGG +
Preference number: 4 (lower is better)
Translates to: EAFELQVAAHQQMTPLPLDTRQE*SGTNTW
Trigger: CCAAGTGTTGGTGCCAGAGCACTCTTGCCTTGTATC...GAGAGGGAGCGGAGTCATTTGCTGATGTGCTGCTACCTGTAACTCAAATGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp GAGGCATTTGAGTTACAGGTAGCAGCACATCAGCAAATGACTCCGCTCCCTCTCTGTGGTGCTGGCATATaGAGTTCTGCTCATGCTCCT +
Preference number: 4 (lower is better)
Translates to: EAFELQVAAHQQMTPLPLCGAGI*SSAHAP
Trigger: AGGAGCATGAGCAGAACTGCATATGCCAGCACCACA...GAGAGGGAGCGGAGTCATTTGCTGATGTGCTGCTACCTGTAACTCAAATGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp GGTAGCAGCACATCAGCAAATGACTCCGCTCCCTCTCTCAGCACACATAGCCTAAGGCATGTGCCACCGTaGCCGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: GSSTSANDSAPSLSTHSLRHVPP*PANFCI
Trigger: AATACAAAAATTAGCCGGGCACGGTGGCACATGCCT...TAGGCTATGTGTGCTGAGAGAGGGAGCGGAGTCATTTGCTGATGTGCTGCTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp GGTAGCAGCACATCAGCAAATGACTCCGCTCCCTCTCTCAGCACACATAGCCTACAAGAGGCTCCATGTTaGAGGATTCTAGAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: GSSTSANDSAPSLSTHSLQEAPC*RILEGS
Trigger: ACTTCCCTCTAGAATCCTCCAACATGGAGCCTCTTG...TAGGCTATGTGTGCTGAGAGAGGGAGCGGAGTCATTTGCTGATGTGCTGCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296734.6
CDS-3UTR CCA 90 bp GAGGCATTTGAGTTACAGGTAGCAGCACATCAGCAAATGACTCCGCTCCCTCTCCACGCTGAAGTGGGATaGTCCAAACTCTTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: EAFELQVAAHQQMTPLPLHAEVG*SKLFVQ
Trigger: CTGCACAAAGAGTTTGGACCATCCCACTTCAGCGTG...GAGAGGGAGCGGAGTCATTTGCTGATGTGCTGCTACCTGTAACTCAAATGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503787.6
CDS-3UTR TCA 90 bp CGAGAGGTAGGAGCAGGCTTTCTGACACACTCATCTGGCATTCTTGAGGCTATCCTCATGCTCCTAACGTaGATGCATAAAACACCCCTG +
Preference number: 4 (lower is better)
Translates to: REVGAGFLTHSSGILEAILMLLT*MHKTPL
Trigger: CAGGGGTGTTTTATGCATTCACGTTAGGAGCATGAG...GATAGCCTCAAGAATGCCAGATGAGTGTGTCAGAAAGCCTGCTCCTACCTCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp GCAGTGGGGAGTCTCTGCTGCCCATGTGGTGCTGGCATATGCAGTTCTGCTCATAACAGTTCTTCCTTTTaGATCCTTCACTTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: AVGSLCCPCGAGICSSAHNSSSF*ILHFKG
Trigger: GCCTTTGAAGTGAAGGATGCAAAAGGAAGAACTGTT...ATGAGCAGAACTGCATATGCCAGCACCACATGGGCAGCAGAGACTCCCCACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp TGGCTACTCTTGATTTTTGCTTTGGGTAACATCCTCATCCTGGGAACATTCATTGCAGTGGGGAGTCTCTaGTGCCCATGTGGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: WLLLIFALGNILILGTFIAVGSL*CPCGAG
Trigger: GCCAGCACCACATGGGCAGCAGAGACTCCCCACTGC...AATGAATGTTCCCAGGATGAGGATGTTACCCAAAGCAAAAATCAAGAGTAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp GGTAGCAGCACATCAGCAAATGACTCCGCTCCCTCTCTCAGCACACATAGCCTAATTCTCCAAACTGATTaGAGGGAAAAGCCAACACGC +
Preference number: 4 (lower is better)
Translates to: GSSTSANDSAPSLSTHSLILQTD*REKPTR
Trigger: GCGTGTTGGCTTTTCCCTGCAATCAGTTTGGAGAAT...TAGGCTATGTGTGCTGAGAGAGGGAGCGGAGTCATTTGCTGATGTGCTGCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503787.6
CDS-3UTR GCA 90 bp GTAGGAGCAGGCTTTCTGACACACTCATCTGGCATTCTTGAGGCTATCCCTACAAAGATTCTACTTCCTTaGTTGGGCGGGGCTCCGATT +
Preference number: 4 (lower is better)
Translates to: VGAGFLTHSSGILEAIPTKILLP*LGGAPI
Trigger: AATCGGAGCCCCGCCCAAGCAAGGAAGTAGAATCTT...TGTAGGGATAGCCTCAAGAATGCCAGATGAGTGTGTCAGAAAGCCTGCTCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503787.6
CDS-3UTR CCA 90 bp GTAGGAGCAGGCTTTCTGACACACTCATCTGGCATTCTTGAGGCTATCCCTACACAGGTTGGAGTGCAGTaGTGCAATCTTGGCTCATTG +
Preference number: 4 (lower is better)
Translates to: VGAGFLTHSSGILEAIPTQVGVQ*CNLGSL
Trigger: CAATGAGCCAAGATTGCACCACTGCACTCCAACCTG...TGTAGGGATAGCCTCAAGAATGCCAGATGAGTGTGTCAGAAAGCCTGCTCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR TCA 90 bp GTAGGAGCAGGCTTTCTGACACACTCATCTGGCATTCTTGAGGCTATCCCTACACAGAACTTCACAACTTaGCCCTCAGGGTTGACAAGA +
Preference number: 4 (lower is better)
Translates to: VGAGFLTHSSGILEAIPTQNFTT*PSGLTR
Trigger: TCTTGTCAACCCTGAGGGTCAAGTTGTGAAGTTCTG...TGTAGGGATAGCCTCAAGAATGCCAGATGAGTGTGTCAGAAAGCCTGCTCCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR TCA 90 bp GAGGCATTTGAGTTACAGGTAGCAGCACATCAGCAAATGACTCCGCTCCCTCTCCCCTACAAATCCTCTTaGCCTCTGGTAGAAATTCCA +
Preference number: 4 (lower is better)
Translates to: EAFELQVAAHQQMTPLPLPYKSS*PLVEIP
Trigger: TGGAATTTCTACCAGAGGTCAAGAGGATTTGTAGGG...GAGAGGGAGCGGAGTCATTTGCTGATGTGCTGCTACCTGTAACTCAAATGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR TCA 90 bp CATCTGGCAGTGGGGAGTCTCTGCTGCCCATGTGGTGCTGGCATATGCAGTTCTCCTTGGTTCCTTCTTTaGAGAATCAACAAGAAATCT +
Preference number: 4 (lower is better)
Translates to: HLAVGSLCCPCGAGICSSPWFLL*RINKKS
Trigger: AGATTTCTTGTTGATTCTTCAAAGAAGGAACCAAGG...AGAACTGCATATGCCAGCACCACATGGGCAGCAGAGACTCCCCACTGCCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503787.6
CDS-3UTR GCA 90 bp ATTTTTCTGTTACAGTCCTTAGCCCAGGCATCCTGTAGCACTCTGTGTCCCAGATGCATAAAACACCCCTaGAGTGCCACAGCACTGCTA +
Preference number: 4 (lower is better)
Translates to: IFLLQSLAQASCSTLCPRCIKHP*SATALL
Trigger: TAGCAGTGCTGTGGCACTGCAGGGGTGTTTTATGCA...TCTGGGACACAGAGTGCTACAGGATGCCTGGGCTAAGGACTGTAACAGAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp CACAGTGCTCTTGAATCCAAAGAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTGTGGGGAGTCTCTGCTaGCCATGTGGTGCTGGCATA +
Preference number: 4 (lower is better)
Translates to: HSALESKEWSSVLAFSSSVGSLC*PCGAGI
Trigger: TATGCCAGCACCACATGGGCAGCAGAGACTCCCCAC...ACTTGATGAAAATGCCAACACACTAGACCACTCTTTGGATTCAAGAGCACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp GACTTGCCTAAAGTCACGCAGCTGGCGAGAGGTAGGAGCAGGCTTTCTGACACACTCTGTTGTTATGTCTaGTGTAAGATGATCAGGAGT +
Preference number: 4 (lower is better)
Translates to: DLPKVTQLARGRSRLSDTLCCYV*CKMIRS
Trigger: ACTCCTGATCATCTTACAGCAGACATAACAACAGAG...TGTGTCAGAAAGCCTGCTCCTACCTCTCGCCAGCTGCGTGACTTTAGGCAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503787.6
CDS-3UTR CCA 90 bp CTAAATACATTCATAGCTGGGTGGCTGGATATGGACTCTGAAGCAGAAGATGCTAAGGCAAGAGTGCTCTaGCACCAACACTTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LNTFIAGWLDMDSEAEDAKARVL*HQHLEG
Trigger: CCCCTCCAAGTGTTGGTGCCAGAGCACTCTTGCCTT...AGCATCTTCTGCTTCAGAGTCCATATCCAGCCACCCAGCTATGAATGTATTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp CGAGAGGTAGGAGCAGGCTTTCTGACACACTCATCTGGCATTCTTGAGGCTATCGAAACCCACTTTATCTaGCTTTGGAGAGAGCTAGTG +
Preference number: 4 (lower is better)
Translates to: REVGAGFLTHSSGILEAIETHFI*LWRELV
Trigger: CACTAGCTCTCTCCAAAGCCAGATAAAGTGGGTTTC...GATAGCCTCAAGAATGCCAGATGAGTGTGTCAGAAAGCCTGCTCCTACCTCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR CAA 72 bp ACAGGTGAGGAAACTGAAATAAGGTACTTAAGTGACTaGCCTAAAGTCACGCAGCTGGCGAGAGGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: TGEETEIRYLSD*PKVTQLARGRS
Trigger: GCTCCTACCTCTCGCCAGCTGCGTGACTTTAGGCAAGTCACTTAAGTACCTTATTTCAGTTTCCTCACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR TCA 90 bp GCAGGCTTTCTGACACACTCATCTGGCATTCTTGAGGCTATCCCTACAAATCCTCTCATCTGGCATTCTTaGGGCTATCCCTACAAATCC +
Preference number: 4 (lower is better)
Translates to: AGFLTHSSGILEAIPTNPLIWHS*GYPYKS
Trigger: GGATTTGTAGGGATAGCCTCAAGAATGCCAGATGAG...AGGATTTGTAGGGATAGCCTCAAGAATGCCAGATGAGTGTGTCAGAAAGCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR TCA 90 bp GACTTGCCTAAAGTCACGCAGCTGGCGAGAGGTAGGAGCAGGCTTTCTGACACATTAGAGAGATGTAAGTaGAGAAACCCACTTTATCTG +
Preference number: 4 (lower is better)
Translates to: DLPKVTQLARGRSRLSDTLERCK*RNPLYL
Trigger: CAGATAAAGTGGGTTTCTTCACTTACATCTCTCTAA...TGTGTCAGAAAGCCTGCTCCTACCTCTCGCCAGCTGCGTGACTTTAGGCAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp AAATTTCAGTCATACACAGTGCTCTTGAATCCAAAGAGTGGTCTAGTGTGTTGGGTGGGGAGTCTCTGCTaGCCATGTGGTGCTGGCATA +
Preference number: 4 (lower is better)
Translates to: KFQSYTVLLNPKSGLVCWVGSLC*PCGAGI
Trigger: TATGCCAGCACCACATGGGCAGCAGAGACTCCCCAC...CCAACACACTAGACCACTCTTTGGATTCAAGAGCACTGTGTATGACTGAAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp GGTAGCAGCACATCAGCAAATGACTCCGCTCCCTCTCTCAGCACACATAGCCTAAGTGGTCTAGTGTGTTaGCATTTTCATCAAGTACAG +
Preference number: 4 (lower is better)
Translates to: GSSTSANDSAPSLSTHSLSGLVC*HFHQVQ
Trigger: CTGTACTTGATGAAAATGCCAACACACTAGACCACT...TAGGCTATGTGTGCTGAGAGAGGGAGCGGAGTCATTTGCTGATGTGCTGCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp GTAGGAGCAGGCTTTCTGACACACTCATCTGGCATTCTTGAGGCTATCCCTACAACATTCATAGCTGGGTaGCTGGATATGGACTCTGAA +
Preference number: 4 (lower is better)
Translates to: VGAGFLTHSSGILEAIPTTFIAG*LDMDSE
Trigger: TTCAGAGTCCATATCCAGCCACCCAGCTATGAATGT...TGTAGGGATAGCCTCAAGAATGCCAGATGAGTGTGTCAGAAAGCCTGCTCCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp CACAGTGCTCTTGAATCCAAAGAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTTCTGGCACCAACACTTaGAGGGGCCACCTGAGCATA +
Preference number: 4 (lower is better)
Translates to: HSALESKEWSSVLAFSSSSGTNT*RGHLSI
Trigger: TATGCTCAGGTGGCCCCTCCAAGTGTTGGTGCCAGA...ACTTGATGAAAATGCCAACACACTAGACCACTCTTTGGATTCAAGAGCACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp GCAGGCTTTCTGACACACTCATCTGGCATTCTTGAGGCTATCCCTACAAATCCTCTGTATCATGTTGACTaGGACAGTCCTGGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: AGFLTHSSGILEAIPTNPLYHVD*DSPGCS
Trigger: GGAACAACCAGGACTGTCCCAGTCAACATGATACAG...AGGATTTGTAGGGATAGCCTCAAGAATGCCAGATGAGTGTGTCAGAAAGCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR TCA 90 bp TTGCTTTGGGTAACATCCTCATCCTGGGAACATTCATTACCACTTAATAGCAAGGCCACAGCACTGCTATaGGTTCATGGAAGGCGTAGG +
Preference number: 4 (lower is better)
Translates to: LLWVTSSSWEHSLPLNSKATALL*VHGRRR
Trigger: CCTACGCCTTCCATGAACTCATAGCAGTGCTGTGGC...CTTGCTATTAAGTGGTAATGAATGTTCCCAGGATGAGGATGTTACCCAAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR TCA 90 bp GCAGGCTTTCTGACACACTCATCTGGCATTCTTGAGGCTATCCCTACAAATCCTGAGAAAATCCAGCACTaGCATAGAGTCTGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: AGFLTHSSGILEAIPTNPEKIQH*HRVCRL
Trigger: CAACCTACAGACTCTATGTCAGTGCTGGATTTTCTC...AGGATTTGTAGGGATAGCCTCAAGAATGCCAGATGAGTGTGTCAGAAAGCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR TCA 90 bp TTCAAGGCAATATGTATGACACGCTTTCAAATCTCCTCCTGCCTACTCTGCTTACCCCGAAGGGACACCTaGATGTCCTTTCTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: FKAICMTRFQISSCLLCLPRRDT*MSFLSR
Trigger: CCTTGAAAGAAAGGACATTCAGGTGTCCCTTCGGGG...TAAGCAGAGTAGGCAGGAGGAGATTTGAAAGCGTGTCATACATATTGCCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR TCA 90 bp CACAGTGCTCTTGAATCCAAAGAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTCCCCGAAGGGACACCTaGATGTCCTTTCTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: HSALESKEWSSVLAFSSSPRRDT*MSFLSR
Trigger: CCTTGAAAGAAAGGACATTCAGGTGTCCCTTCGGGG...ACTTGATGAAAATGCCAACACACTAGACCACTCTTTGGATTCAAGAGCACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR TCA 90 bp GAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTAGAAAATGTCAAGATGGTCTCGAACTCCTaGCCTGAAGTGATCCACCCG +
Preference number: 4 (lower is better)
Translates to: EWSSVLAFSSSTVLENVKMVSNS*PEVIHP
Trigger: CGGGTGGATCACTTCAGGTCAGGAGTTCGAGACCAT...CTTGACATTTTCTAGGACTGTACTTGATGAAAATGCCAACACACTAGACCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR TCA 90 bp TTGCTTTGGGTAACATCCTCATCCTGGGAACATTCATTACCACTTAATAGCAAGATGGTCTCGAACTCCTaGCCTGAAGTGATCCACCCG +
Preference number: 4 (lower is better)
Translates to: LLWVTSSSWEHSLPLNSKMVSNS*PEVIHP
Trigger: CGGGTGGATCACTTCAGGTCAGGAGTTCGAGACCAT...CTTGCTATTAAGTGGTAATGAATGTTCCCAGGATGAGGATGTTACCCAAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp ATTTTTCTGTTACAGTCCTTAGCCCAGGCATCCTGTAGCACTCTGTGTCCCAGAAACTGCAAATACCTTTaGTCTGGGCCCGGAACATTT +
Preference number: 4 (lower is better)
Translates to: IFLLQSLAQASCSTLCPRNCKYL*SGPGTF
Trigger: AAATGTTCCGGGCCCAGAGCAAAGGTATTTGCAGTT...TCTGGGACACAGAGTGCTACAGGATGCCTGGGCTAAGGACTGTAACAGAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp CTTGAATCCAAAGAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTACTGAGAACGCACTACTaGACTCCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: LESKEWSSVLAFSSSTVLLRTHY*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCAGTAGTGCGTTCTCAG...TAGGACTGTACTTGATGAAAATGCCAACACACTAGACCACTCTTTGGATTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296734.6
ENST00000503787.6
ENST00000515370.1
CDS-3UTR GCA 90 bp TTGCTTTGGGTAACATCCTCATCCTGGGAACATTCATTACCACTTAATAGCAAGCTGCTGCCCATGTGGTaGTGGCATATGCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: LLWVTSSSWEHSLPLNSKLLPMW*WHMQFC
Trigger: GCAGAACTGCATATGCCAGCACCACATGGGCAGCAG...CTTGCTATTAAGTGGTAATGAATGTTCCCAGGATGAGGATGTTACCCAAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp GTTGCAAAGGGCTTTTTATTCCATTCAACCCCTGTTCAATTTACAGGTGAGGAACTGCTGCCCATGTGGTaGTGGCATATGCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: VAKGFLFHSTPVQFTGEELLPMW*WHMQFC
Trigger: GCAGAACTGCATATGCCAGCACCACATGGGCAGCAG...TTCCTCACCTGTAAATTGAACAGGGGTTGAATGGAATAAAAAGCCCTTTGCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp GGTAGCAGCACATCAGCAAATGACTCCGCTCCCTCTCTCAGCACACATAGCCTAAACAAGAAATCTAAATaGAGGTTCTCCTTCAGATCC +
Preference number: 4 (lower is better)
Translates to: GSSTSANDSAPSLSTHSLNKKSK*RFSFRS
Trigger: GGATCTGAAGGAGAACCTGCATTTAGATTTCTTGTT...TAGGCTATGTGTGCTGAGAGAGGGAGCGGAGTCATTTGCTGATGTGCTGCTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503787.6
CDS-3UTR CCA 90 bp CGAGAGGTAGGAGCAGGCTTTCTGACACACTCATCTGGCATTCTTGAGGCTATCAGTGGTCTAGTGTGTTaGCATTTTCATCAAGTACAG +
Preference number: 4 (lower is better)
Translates to: REVGAGFLTHSSGILEAISGLVC*HFHQVQ
Trigger: CTGTACTTGATGAAAATGCCAACACACTAGACCACT...GATAGCCTCAAGAATGCCAGATGAGTGTGTCAGAAAGCCTGCTCCTACCTCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp GTAGGAGCAGGCTTTCTGACACACTCATCTGGCATTCTTGAGGCTATCCCTACACATCAGGTCAGAATTTaGGAGTCAAGTCACAGACTA +
Preference number: 4 (lower is better)
Translates to: VGAGFLTHSSGILEAIPTHQVRI*ESSHRL
Trigger: TAGTCTGTGACTTGACTCCCAAATTCTGACCTGATG...TGTAGGGATAGCCTCAAGAATGCCAGATGAGTGTGTCAGAAAGCCTGCTCCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp TTGCTTTGGGTAACATCCTCATCCTGGGAACATTCATTACCACTTAATAGCAAGTCTGGCACCAACACTTaGAGGGGCCACCTGAGCATA +
Preference number: 4 (lower is better)
Translates to: LLWVTSSSWEHSLPLNSKSGTNT*RGHLSI
Trigger: TATGCTCAGGTGGCCCCTCCAAGTGTTGGTGCCAGA...CTTGCTATTAAGTGGTAATGAATGTTCCCAGGATGAGGATGTTACCCAAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp TTGCTTTGGGTAACATCCTCATCCTGGGAACATTCATTACCACTTAATAGCAAGAAGGCAAGAGTGCTCTaGCACCAACACTTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LLWVTSSSWEHSLPLNSKKARVL*HQHLEG
Trigger: CCCCTCCAAGTGTTGGTGCCAGAGCACTCTTGCCTT...CTTGCTATTAAGTGGTAATGAATGTTCCCAGGATGAGGATGTTACCCAAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp TTCAAGGCAATATGTATGACACGCTTTCAAATCTCCTCCTGCCTACTCTGCTTATCTCTGCTGCCCATGTaGTGCTGGCATATGCAGTTC +
Preference number: 4 (lower is better)
Translates to: FKAICMTRFQISSCLLCLSLLPM*CWHMQF
Trigger: GAACTGCATATGCCAGCACCACATGGGCAGCAGAGA...TAAGCAGAGTAGGCAGGAGGAGATTTGAAAGCGTGTCATACATATTGCCTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp TTGCTTTGGGTAACATCCTCATCCTGGGAACATTCATTACCACTTAATAGCAAGTTCTACTTCCTTGCTTaGGCGGGGCTCCGATTCTCC +
Preference number: 4 (lower is better)
Translates to: LLWVTSSSWEHSLPLNSKFYFLA*AGLRFS
Trigger: GGAGAATCGGAGCCCCGCCCAAGCAAGGAAGTAGAA...CTTGCTATTAAGTGGTAATGAATGTTCCCAGGATGAGGATGTTACCCAAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503787.6
ENST00000515370.1
CDS-3UTR TCA 90 bp GAGGCATTTGAGTTACAGGTAGCAGCACATCAGCAAATGACTCCGCTCCCTCTCATGCAGAAACAAGACTaGAGGAAGATTGTCCAATAT +
Preference number: 4 (lower is better)
Translates to: EAFELQVAAHQQMTPLPLMQKQD*RKIVQY
Trigger: ATATTGGACAATCTTCCTTCAGTCTTGTTTCTGCAT...GAGAGGGAGCGGAGTCATTTGCTGATGTGCTGCTACCTGTAACTCAAATGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR TCA 90 bp GCAGGCTTTCTGACACACTCATCTGGCATTCTTGAGGCTATCCCTACAAATCCTGTGTCCCAGACTTTTTaGTGCAGAAACAAGACTGAA +
Preference number: 4 (lower is better)
Translates to: AGFLTHSSGILEAIPTNPVSQTF*CRNKTE
Trigger: TTCAGTCTTGTTTCTGCATCAAAAAGTCTGGGACAC...AGGATTTGTAGGGATAGCCTCAAGAATGCCAGATGAGTGTGTCAGAAAGCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR TCA 90 bp TTCAAGGCAATATGTATGACACGCTTTCAAATCTCCTCCTGCCTACTCTGCTTAGAAAAGCCAACACGCTaGAGTGGGATGGTCCAAACT +
Preference number: 4 (lower is better)
Translates to: FKAICMTRFQISSCLLCLEKPTR*SGMVQT
Trigger: AGTTTGGACCATCCCACTTCAGCGTGTTGGCTTTTC...TAAGCAGAGTAGGCAGGAGGAGATTTGAAAGCGTGTCATACATATTGCCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503787.6
CDS-3UTR GCA 90 bp TCCAAAGAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTAGAAAATCTGAGAACGCACTACTaGACTCCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: SKEWSSVLAFSSSTVLENLRTHY*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCAGTAGTGCGTTCTCAG...ATTTTCTAGGACTGTACTTGATGAAAATGCCAACACACTAGACCACTCTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296734.6
ENST00000503787.6
ENST00000515370.1
CDS-3UTR GCA 90 bp GCAGGCTTTCTGACACACTCATCTGGCATTCTTGAGGCTATCCCTACAAATCCTCTTTGGGAGAAGAAATaGCTTGTGACTCTAAGAGGT +
Preference number: 4 (lower is better)
Translates to: AGFLTHSSGILEAIPTNPLWEKK*LVTLRG
Trigger: ACCTCTTAGAGTCACAAGGCATTTCTTCTCCCAAAG...AGGATTTGTAGGGATAGCCTCAAGAATGCCAGATGAGTGTGTCAGAAAGCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp CACAGTGCTCTTGAATCCAAAGAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTGATACAAGGCAAGAGTaGTCTGGCACCAACACTTGG +
Preference number: 4 (lower is better)
Translates to: HSALESKEWSSVLAFSSSDTRQE*SGTNTW
Trigger: CCAAGTGTTGGTGCCAGAGCACTCTTGCCTTGTATC...ACTTGATGAAAATGCCAACACACTAGACCACTCTTTGGATTCAAGAGCACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp TGGCTACTCTTGATTTTTGCTTTGGGTAACATCCTCATCCTGGGAACATTCATTGCAGTGCCACAGCACTaGTATGAGTTCATGGAAGGC +
Preference number: 4 (lower is better)
Translates to: WLLLIFALGNILILGTFIAVPQH*YEFMEG
Trigger: GCCTTCCATGAACTCATAGCAGTGCTGTGGCACTGC...AATGAATGTTCCCAGGATGAGGATGTTACCCAAAGCAAAAATCAAGAGTAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp AAATTTCAGTCATACACAGTGCTCTTGAATCCAAAGAGTGGTCTAGTGTGTTGGTCCTCCTGCCTACTCTaGTTACCTAAAGGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: KFQSYTVLLNPKSGLVCWSSCLL*LPKGQG
Trigger: CCCTTGCCCTTTAGGTAAGCAGAGTAGGCAGGAGGA...CCAACACACTAGACCACTCTTTGGATTCAAGAGCACTGTGTATGACTGAAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp GAGGCATTTGAGTTACAGGTAGCAGCACATCAGCAAATGACTCCGCTCCCTCTCCTATTAGAAACGCAATaGCATTCTCATAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: EAFELQVAAHQQMTPLPLLLETQ*HSHRSS
Trigger: AGAGGATCTATGAGAATGCCATTGCGTTTCTAATAG...GAGAGGGAGCGGAGTCATTTGCTGATGTGCTGCTACCTGTAACTCAAATGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp ATTTTTCTGTTACAGTCCTTAGCCCAGGCATCCTGTAGCACTCTGTGTCCCAGACATCAGGTCAGAATTTaGGAGTCAAGTCACAGACTA +
Preference number: 4 (lower is better)
Translates to: IFLLQSLAQASCSTLCPRHQVRI*ESSHRL
Trigger: TAGTCTGTGACTTGACTCCCAAATTCTGACCTGATG...TCTGGGACACAGAGTGCTACAGGATGCCTGGGCTAAGGACTGTAACAGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp GAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTAGAAAATGTCAAGCTGCCCATGTGGTGCTaGCATATGCAGTTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: EWSSVLAFSSSTVLENVKLPMWC*HMQFCS
Trigger: TGAGCAGAACTGCATATGCCAGCACCACATGGGCAG...CTTGACATTTTCTAGGACTGTACTTGATGAAAATGCCAACACACTAGACCACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp AAACATCTTCACTTTCATCCATCAGGTCAGAATTTGGGAGTCAAGTCACAGACTTCTCTGCTGCCCATGTaGTGCTGGCATATGCAGTTC +
Preference number: 4 (lower is better)
Translates to: KHLHFHPSGQNLGVKSQTSLLPM*CWHMQF
Trigger: GAACTGCATATGCCAGCACCACATGGGCAGCAGAGA...AGTCTGTGACTTGACTCCCAAATTCTGACCTGATGGATGAAAGTGAAGATGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp TTTGTCCGCTGGTATTCCTATGAGGCATTTGAGTTACAGGTAGCAGCACATCAGGAAACCCACTTTATCTaGCTTTGGAGAGAGCTAGTG +
Preference number: 4 (lower is better)
Translates to: FVRWYSYEAFELQVAAHQETHFI*LWRELV
Trigger: CACTAGCTCTCTCCAAAGCCAGATAAAGTGGGTTTC...CTGATGTGCTGCTACCTGTAACTCAAATGCCTCATAGGAATACCAGCGGACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR TCA 90 bp GTAGGAGCAGGCTTTCTGACACACTCATCTGGCATTCTTGAGGCTATCCCTACAACTTTAGGACTTGTATaGTCACCCCCTTTTTATACT +
Preference number: 4 (lower is better)
Translates to: VGAGFLTHSSGILEAIPTTLGLV*SPPFYT
Trigger: AGTATAAAAAGGGGGTGATCATACAAGTCCTAAAGT...TGTAGGGATAGCCTCAAGAATGCCAGATGAGTGTGTCAGAAAGCCTGCTCCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR TCA 90 bp TATACTGAGGTAGCATTACTGAATTTGCCATACGAAACATCTTCACTTTCATCCCAGCACATCAGCAAATaGCTCCGCTCCCTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: YTEVALLNLPYETSSLSSQHISK*LRSLSQ
Trigger: CTGAGAGAGGGAGCGGAGTCATTTGCTGATGTGCTG...GGATGAAAGTGAAGATGTTTCGTATGGCAAATTCAGTAATGCTACCTCAGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR TCA 90 bp GAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTAGAAAATGTCAAGGAAAAGCCAACACGCTaGAGTGGGATGGTCCAAACT +
Preference number: 4 (lower is better)
Translates to: EWSSVLAFSSSTVLENVKEKPTR*SGMVQT
Trigger: AGTTTGGACCATCCCACTTCAGCGTGTTGGCTTTTC...CTTGACATTTTCTAGGACTGTACTTGATGAAAATGCCAACACACTAGACCACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503787.6
ENST00000515370.1
CDS-3UTR GCA 90 bp TTGCTTTGGGTAACATCCTCATCCTGGGAACATTCATTACCACTTAATAGCAAGAAAACACCCCTGCAGTaGCACAGCACTGCTATGAGT +
Preference number: 4 (lower is better)
Translates to: LLWVTSSSWEHSLPLNSKKTPLQ*HSTAMS
Trigger: ACTCATAGCAGTGCTGTGGCACTGCAGGGGTGTTTT...CTTGCTATTAAGTGGTAATGAATGTTCCCAGGATGAGGATGTTACCCAAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp AAATTTCAGTCATACACAGTGCTCTTGAATCCAAAGAGTGGTCTAGTGTGTTGGTGCATAAAACACCCCTaGAGTGCCACAGCACTGCTA +
Preference number: 4 (lower is better)
Translates to: KFQSYTVLLNPKSGLVCWCIKHP*SATALL
Trigger: TAGCAGTGCTGTGGCACTGCAGGGGTGTTTTATGCA...CCAACACACTAGACCACTCTTTGGATTCAAGAGCACTGTGTATGACTGAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp CACAGTGCTCTTGAATCCAAAGAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTGGTCCAAACTCTTTGTaGAGTTCCTTCAGCCCTAAG +
Preference number: 4 (lower is better)
Translates to: HSALESKEWSSVLAFSSSGPNSL*SSFSPK
Trigger: CTTAGGGCTGAAGGAACTGCACAAAGAGTTTGGACC...ACTTGATGAAAATGCCAACACACTAGACCACTCTTTGGATTCAAGAGCACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503787.6
ENST00000515370.1
CDS-3UTR GCA 90 bp TACACAGTGCTCTTGAATCCAAAGAGTGGTCTAGTGTGTTGGCATTTTCATCAAAAGATTCTACTTCCTTaGTTGGGCGGGGCTCCGATT +
Preference number: 4 (lower is better)
Translates to: YTVLLNPKSGLVCWHFHQKILLP*LGGAPI
Trigger: AATCGGAGCCCCGCCCAAGCAAGGAAGTAGAATCTT...TTGATGAAAATGCCAACACACTAGACCACTCTTTGGATTCAAGAGCACTGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503787.6
ENST00000515370.1
CDS-3UTR CCA 90 bp ATTTTTCTGTTACAGTCCTTAGCCCAGGCATCCTGTAGCACTCTGTGTCCCAGAGTAACATCCTCATCCTaGGAACATTCATTACCACTT +
Preference number: 4 (lower is better)
Translates to: IFLLQSLAQASCSTLCPRVTSSS*EHSLPL
Trigger: AAGTGGTAATGAATGTTCCCAGGATGAGGATGTTAC...TCTGGGACACAGAGTGCTACAGGATGCCTGGGCTAAGGACTGTAACAGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp CTTGAATCCAAAGAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTACTGGGTGGCTGGATATaGACTCTGAAGCAGAAGATG +
Preference number: 4 (lower is better)
Translates to: LESKEWSSVLAFSSSTVLLGGWI*TLKQKM
Trigger: CATCTTCTGCTTCAGAGTCCATATCCAGCCACCCAG...TAGGACTGTACTTGATGAAAATGCCAACACACTAGACCACTCTTTGGATTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp GCAGGCTTTCTGACACACTCATCTGGCATTCTTGAGGCTATCCCTACAAATCCTTATGTGTTTGTCCGCTaGTATTCCTATGAGGCATTT +
Preference number: 4 (lower is better)
Translates to: AGFLTHSSGILEAIPTNPYVFVR*YSYEAF
Trigger: AAATGCCTCATAGGAATACCAGCGGACAAACACATA...AGGATTTGTAGGGATAGCCTCAAGAATGCCAGATGAGTGTGTCAGAAAGCCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp AAATTTCAGTCATACACAGTGCTCTTGAATCCAAAGAGTGGTCTAGTGTGTTGGCACGCTGAAGTGGGATaGTCCAAACTCTTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: KFQSYTVLLNPKSGLVCWHAEVG*SKLFVQ
Trigger: CTGCACAAAGAGTTTGGACCATCCCACTTCAGCGTG...CCAACACACTAGACCACTCTTTGGATTCAAGAGCACTGTGTATGACTGAAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503787.6
ENST00000515370.1
CDS-3UTR CCA 90 bp GAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTAGAAAATGTCAAGGCCAACACGCTGAAGTaGGATGGTCCAAACTCTTTG +
Preference number: 4 (lower is better)
Translates to: EWSSVLAFSSSTVLENVKANTLK*DGPNSL
Trigger: CAAAGAGTTTGGACCATCCCACTTCAGCGTGTTGGC...CTTGACATTTTCTAGGACTGTACTTGATGAAAATGCCAACACACTAGACCACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503787.6
ENST00000515370.1
CDS-3UTR CCA 90 bp TGGCTACTCTTGATTTTTGCTTTGGGTAACATCCTCATCCTGGGAACATTCATTGTGAAACCTTTGCTCTaGGCCCGGAACATTTTAGCG +
Preference number: 4 (lower is better)
Translates to: WLLLIFALGNILILGTFIVKPLL*ARNILA
Trigger: CGCTAAAATGTTCCGGGCCCAGAGCAAAGGTTTCAC...AATGAATGTTCCCAGGATGAGGATGTTACCCAAAGCAAAAATCAAGAGTAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515370.1
3UTR CAA 72 bp CTCTTGGAGCAAAATTGCAAAGGACAGATAGGCTTGTaGGTGGCTTCTGTTTTCTTCGCTAACAATCCAGGT +
Preference number: 4 (lower is better)
Translates to: LLEQNCKGQIGL*VASVFFANNPG
Trigger: ACCTGGATTGTTAGCGAAGAAAACAGAAGCCACCAACAAGCCTATCTGTCCTTTGCAATTTTGCTCCAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR TCA 90 bp ATTTTTCTGTTACAGTCCTTAGCCCAGGCATCCTGTAGCACTCTGTGTCCCAGATTAGAGAGATGTAAGTaGAGAAACCCACTTTATCTG +
Preference number: 4 (lower is better)
Translates to: IFLLQSLAQASCSTLCPRLERCK*RNPLYL
Trigger: CAGATAAAGTGGGTTTCTTCACTTACATCTCTCTAA...TCTGGGACACAGAGTGCTACAGGATGCCTGGGCTAAGGACTGTAACAGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR TCA 90 bp TTTGTCCGCTGGTATTCCTATGAGGCATTTGAGTTACAGGTAGCAGCACATCAGATAGAGTCTGTAGGTTaGATAAGGCAGCCAAGATTA +
Preference number: 4 (lower is better)
Translates to: FVRWYSYEAFELQVAAHQIESVG*IRQPRL
Trigger: TAATCTTGGCTGCCTTATTCAACCTACAGACTCTAT...CTGATGTGCTGCTACCTGTAACTCAAATGCCTCATAGGAATACCAGCGGACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp GAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTAGAAAATGTCAAGTTGTCTAACCAGAGCTaGTATGTCAGGCCTGATGAC +
Preference number: 4 (lower is better)
Translates to: EWSSVLAFSSSTVLENVKLSNQS*YVRPDD
Trigger: GTCATCAGGCCTGACATAGCAGCTCTGGTTAGACAA...CTTGACATTTTCTAGGACTGTACTTGATGAAAATGCCAACACACTAGACCACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296734.6
ENST00000503787.6
ENST00000515370.1
CDS-3UTR GCA 90 bp GTTGCAAAGGGCTTTTTATTCCATTCAACCCCTGTTCAATTTACAGGTGAGGAATTGTCTAACCAGAGCTaGTATGTCAGGCCTGATGAC +
Preference number: 4 (lower is better)
Translates to: VAKGFLFHSTPVQFTGEELSNQS*YVRPDD
Trigger: GTCATCAGGCCTGACATAGCAGCTCTGGTTAGACAA...TTCCTCACCTGTAAATTGAACAGGGGTTGAATGGAATAAAAAGCCCTTTGCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp AAATTTCAGTCATACACAGTGCTCTTGAATCCAAAGAGTGGTCTAGTGTGTTGGTTGTCTAACCAGAGCTaGTATGTCAGGCCTGATGAC +
Preference number: 4 (lower is better)
Translates to: KFQSYTVLLNPKSGLVCWLSNQS*YVRPDD
Trigger: GTCATCAGGCCTGACATAGCAGCTCTGGTTAGACAA...CCAACACACTAGACCACTCTTTGGATTCAAGAGCACTGTGTATGACTGAAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296734.6
ENST00000503787.6
ENST00000515370.1
CDS-3UTR GCA 90 bp AAACATCTTCACTTTCATCCATCAGGTCAGAATTTGGGAGTCAAGTCACAGACTCCTGGTTGTTCCCAGTaGAGCTCCATTATCATCCAT +
Preference number: 4 (lower is better)
Translates to: KHLHFHPSGQNLGVKSQTPGCSQ*SSIIIH
Trigger: ATGGATGATAATGGAGCTGCACTGGGAACAACCAGG...AGTCTGTGACTTGACTCCCAAATTCTGACCTGATGGATGAAAGTGAAGATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp GTTGCAAAGGGCTTTTTATTCCATTCAACCCCTGTTCAATTTACAGGTGAGGAAAGGCATGTGCCACCGTaGCCGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: VAKGFLFHSTPVQFTGEERHVPP*PANFCI
Trigger: AATACAAAAATTAGCCGGGCACGGTGGCACATGCCT...TTCCTCACCTGTAAATTGAACAGGGGTTGAATGGAATAAAAAGCCCTTTGCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp AAATTTCAGTCATACACAGTGCTCTTGAATCCAAAGAGTGGTCTAGTGTGTTGGGCAATCTTGGCTCATTaGAACCTCAGCCTCCTGTTT +
Preference number: 4 (lower is better)
Translates to: KFQSYTVLLNPKSGLVCWAILAH*NLSLLF
Trigger: AAACAGGAGGCTGAGGTTGCAATGAGCCAAGATTGC...CCAACACACTAGACCACTCTTTGGATTCAAGAGCACTGTGTATGACTGAAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp GAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTAGAAAATGTCAAGGCAATCTTGGCTCATTaGAACCTCAGCCTCCTGTTT +
Preference number: 4 (lower is better)
Translates to: EWSSVLAFSSSTVLENVKAILAH*NLSLLF
Trigger: AAACAGGAGGCTGAGGTTGCAATGAGCCAAGATTGC...CTTGACATTTTCTAGGACTGTACTTGATGAAAATGCCAACACACTAGACCACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp GAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTAGAAAATGTCAAGCAAGAGGCTCCATGTTaGAGGATTCTAGAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: EWSSVLAFSSSTVLENVKQEAPC*RILEGS
Trigger: ACTTCCCTCTAGAATCCTCCAACATGGAGCCTCTTG...CTTGACATTTTCTAGGACTGTACTTGATGAAAATGCCAACACACTAGACCACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000515370.1
CDS-3UTR CCA 90 bp AAATTTCAGTCATACACAGTGCTCTTGAATCCAAAGAGTGGTCTAGTGTGTTGGCAAATACCTTTGCTCTaGGCCCGGAACATTTTAGCG +
Preference number: 4 (lower is better)
Translates to: KFQSYTVLLNPKSGLVCWQIPLL*ARNILA
Trigger: CGCTAAAATGTTCCGGGCCCAGAGCAAAGGTATTTG...CCAACACACTAGACCACTCTTTGGATTCAAGAGCACTGTGTATGACTGAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp CAGTTATTCCAGAAATTTCAGTCATACACAGTGCTCTTGAATCCAAAGAGTGGTCCATTATCATCCATCTaGCAGTGGGGAGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: QLFQKFQSYTVLLNPKSGPLSSI*QWGVSA
Trigger: AGCAGAGACTCCCCACTGCCAGATGGATGATAATGG...ACCACTCTTTGGATTCAAGAGCACTGTGTATGACTGAAATTTCTGGAATAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp TGGCTACTCTTGATTTTTGCTTTGGGTAACATCCTCATCCTGGGAACATTCATTTTTCTGTCTGTGAGTTaGCAGTCACTGGCCACGTTT +
Preference number: 4 (lower is better)
Translates to: WLLLIFALGNILILGTFIFLSVS*QSLATF
Trigger: AAACGTGGCCAGTGACTGCCAACTCACAGACAGAAA...AATGAATGTTCCCAGGATGAGGATGTTACCCAAAGCAAAAATCAAGAGTAGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000503787.6
ENST00000515370.1
CDS-3UTR CCA 90 bp GTAACATCCTCATCCTGGGAACATTCATTACCACTTAATAGCAAGATAACATTATTCTACTTCCTTGCTTaGGCGGGGCTCCGATTCTCC +
Preference number: 4 (lower is better)
Translates to: VTSSSWEHSLPLNSKITLFYFLA*AGLRFS
Trigger: GGAGAATCGGAGCCCCGCCCAAGCAAGGAAGTAGAA...TAATGTTATCTTGCTATTAAGTGGTAATGAATGTTCCCAGGATGAGGATGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503787.6
ENST00000515370.1
CDS-3UTR TCA 90 bp TCCAAAGAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTAGAAAATCAGAACTTCACAACTTaGCCCTCAGGGTTGACAAGA +
Preference number: 4 (lower is better)
Translates to: SKEWSSVLAFSSSTVLENQNFTT*PSGLTR
Trigger: TCTTGTCAACCCTGAGGGTCAAGTTGTGAAGTTCTG...ATTTTCTAGGACTGTACTTGATGAAAATGCCAACACACTAGACCACTCTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296734.6
ENST00000503787.6
ENST00000515370.1
CDS-3UTR TCA 90 bp TCCAAAGAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTAGAAAATGCTGGATATGGACTCTaGAGCAGAAGATGCTTCATG +
Preference number: 4 (lower is better)
Translates to: SKEWSSVLAFSSSTVLENAGYGL*SRRCFM
Trigger: CATGAAGCATCTTCTGCTTCAGAGTCCATATCCAGC...ATTTTCTAGGACTGTACTTGATGAAAATGCCAACACACTAGACCACTCTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp AAACATCTTCACTTTCATCCATCAGGTCAGAATTTGGGAGTCAAGTCACAGACTAACTGCAAATACCTTTaGTCTGGGCCCGGAACATTT +
Preference number: 4 (lower is better)
Translates to: KHLHFHPSGQNLGVKSQTNCKYL*SGPGTF
Trigger: AAATGTTCCGGGCCCAGAGCAAAGGTATTTGCAGTT...AGTCTGTGACTTGACTCCCAAATTCTGACCTGATGGATGAAAGTGAAGATGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp TATACTGAGGTAGCATTACTGAATTTGCCATACGAAACATCTTCACTTTCATCCAAAACACCCCTGCAGTaGCACAGCACTGCTATGAGT +
Preference number: 4 (lower is better)
Translates to: YTEVALLNLPYETSSLSSKTPLQ*HSTAMS
Trigger: ACTCATAGCAGTGCTGTGGCACTGCAGGGGTGTTTT...GGATGAAAGTGAAGATGTTTCGTATGGCAAATTCAGTAATGCTACCTCAGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp TATACTGAGGTAGCATTACTGAATTTGCCATACGAAACATCTTCACTTTCATCCCCATTATCATCCATCTaGCAGTGGGGAGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: YTEVALLNLPYETSSLSSPLSSI*QWGVSA
Trigger: AGCAGAGACTCCCCACTGCCAGATGGATGATAATGG...GGATGAAAGTGAAGATGTTTCGTATGGCAAATTCAGTAATGCTACCTCAGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR TCA 90 bp GAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTAGAAAATGTCAAGCTTGACCCTCAGGGTTaGCAAGATACTTCCAAAAAT +
Preference number: 4 (lower is better)
Translates to: EWSSVLAFSSSTVLENVKLDPQG*QDTSKN
Trigger: ATTTTTGGAAGTATCTTGTCAACCCTGAGGGTCAAG...CTTGACATTTTCTAGGACTGTACTTGATGAAAATGCCAACACACTAGACCACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296734.6
ENST00000503787.6
ENST00000515370.1
CDS-3UTR TCA 90 bp GTTGCAAAGGGCTTTTTATTCCATTCAACCCCTGTTCAATTTACAGGTGAGGAACTTGACCCTCAGGGTTaGCAAGATACTTCCAAAAAT +
Preference number: 4 (lower is better)
Translates to: VAKGFLFHSTPVQFTGEELDPQG*QDTSKN
Trigger: ATTTTTGGAAGTATCTTGTCAACCCTGAGGGTCAAG...TTCCTCACCTGTAAATTGAACAGGGGTTGAATGGAATAAAAAGCCCTTTGCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR TCA 90 bp AAATTTCAGTCATACACAGTGCTCTTGAATCCAAAGAGTGGTCTAGTGTGTTGGCTTGACCCTCAGGGTTaGCAAGATACTTCCAAAAAT +
Preference number: 4 (lower is better)
Translates to: KFQSYTVLLNPKSGLVCWLDPQG*QDTSKN
Trigger: ATTTTTGGAAGTATCTTGTCAACCCTGAGGGTCAAG...CCAACACACTAGACCACTCTTTGGATTCAAGAGCACTGTGTATGACTGAAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296734.6
ENST00000503787.6
ENST00000515370.1
CDS-3UTR TCA 90 bp CAGTTATTCCAGAAATTTCAGTCATACACAGTGCTCTTGAATCCAAAGAGTGGTCCCTACAAATCCTCTTaGCCTCTGGTAGAAATTCCA +
Preference number: 4 (lower is better)
Translates to: QLFQKFQSYTVLLNPKSGPYKSS*PLVEIP
Trigger: TGGAATTTCTACCAGAGGTCAAGAGGATTTGTAGGG...ACCACTCTTTGGATTCAAGAGCACTGTGTATGACTGAAATTTCTGGAATAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR TCA 90 bp GTTGCAAAGGGCTTTTTATTCCATTCAACCCCTGTTCAATTTACAGGTGAGGAAGTGTCCCAGACTTTTTaGTGCAGAAACAAGACTGAA +
Preference number: 4 (lower is better)
Translates to: VAKGFLFHSTPVQFTGEEVSQTF*CRNKTE
Trigger: TTCAGTCTTGTTTCTGCATCAAAAAGTCTGGGACAC...TTCCTCACCTGTAAATTGAACAGGGGTTGAATGGAATAAAAAGCCCTTTGCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp CACAGTGCTCTTGAATCCAAAGAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTTATAGACAGCAAAACTaGAAATACCTTTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: HSALESKEWSSVLAFSSSYRQQN*KYLCSG
Trigger: CCCAGAGCAAAGGTATTTGCAGTTTTGCTGTCTATA...ACTTGATGAAAATGCCAACACACTAGACCACTCTTTGGATTCAAGAGCACTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp TCCAAAGAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTAGAAAATATTCTCCAAACTGATTaGAGGGAAAAGCCAACACGC +
Preference number: 4 (lower is better)
Translates to: SKEWSSVLAFSSSTVLENILQTD*REKPTR
Trigger: GCGTGTTGGCTTTTCCCTGCAATCAGTTTGGAGAAT...ATTTTCTAGGACTGTACTTGATGAAAATGCCAACACACTAGACCACTCTTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503787.6
ENST00000515370.1
CDS-3UTR CCA 90 bp TCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTAGAAAATGTCAAGTTGAACCAAATACCTTTGCTCTaGGCCCGGAACATTTTAGCG +
Preference number: 4 (lower is better)
Translates to: SSVLAFSSSTVLENVKLNQIPLL*ARNILA
Trigger: CGCTAAAATGTTCCGGGCCCAGAGCAAAGGTATTTG...GTTCAACTTGACATTTTCTAGGACTGTACTTGATGAAAATGCCAACACACTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp TTCAAGGCAATATGTATGACACGCTTTCAAATCTCCTCCTGCCTACTCTGCTTACTTGAATCCAAAGAGTaGTCTAGTGTGTTGGCATTT +
Preference number: 4 (lower is better)
Translates to: FKAICMTRFQISSCLLCLLESKE*SSVLAF
Trigger: AAATGCCAACACACTAGACCACTCTTTGGATTCAAG...TAAGCAGAGTAGGCAGGAGGAGATTTGAAAGCGTGTCATACATATTGCCTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp TCCAAAGAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTAGAAAATACATTCATAGCTGGGTaGCTGGATATGGACTCTGAA +
Preference number: 4 (lower is better)
Translates to: SKEWSSVLAFSSSTVLENTFIAG*LDMDSE
Trigger: TTCAGAGTCCATATCCAGCCACCCAGCTATGAATGT...ATTTTCTAGGACTGTACTTGATGAAAATGCCAACACACTAGACCACTCTTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp GTTGCAAAGGGCTTTTTATTCCATTCAACCCCTGTTCAATTTACAGGTGAGGAAAAATACATTCATAGCTaGGTGGCTGGATATGGACTC +
Preference number: 4 (lower is better)
Translates to: VAKGFLFHSTPVQFTGEEKYIHS*VAGYGL
Trigger: GAGTCCATATCCAGCCACCCAGCTATGAATGTATTT...TTCCTCACCTGTAAATTGAACAGGGGTTGAATGGAATAAAAAGCCCTTTGCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp TTGCTTTGGGTAACATCCTCATCCTGGGAACATTCATTACCACTTAATAGCAAGAAATACATTCATAGCTaGGTGGCTGGATATGGACTC +
Preference number: 4 (lower is better)
Translates to: LLWVTSSSWEHSLPLNSKKYIHS*VAGYGL
Trigger: GAGTCCATATCCAGCCACCCAGCTATGAATGTATTT...CTTGCTATTAAGTGGTAATGAATGTTCCCAGGATGAGGATGTTACCCAAAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp TATACTGAGGTAGCATTACTGAATTTGCCATACGAAACATCTTCACTTTCATCCCTGTATCATGTTGACTaGGACAGTCCTGGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: YTEVALLNLPYETSSLSSLYHVD*DSPGCS
Trigger: GGAACAACCAGGACTGTCCCAGTCAACATGATACAG...GGATGAAAGTGAAGATGTTTCGTATGGCAAATTCAGTAATGCTACCTCAGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp TCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTAGAAAATGTCAAGTTGAACTTTCTGTCTGTGAGTTaGCAGTCACTGGCCACGTTT +
Preference number: 4 (lower is better)
Translates to: SSVLAFSSSTVLENVKLNFLSVS*QSLATF
Trigger: AAACGTGGCCAGTGACTGCCAACTCACAGACAGAAA...GTTCAACTTGACATTTTCTAGGACTGTACTTGATGAAAATGCCAACACACTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503787.6
ENST00000515370.1
CDS-3UTR CCA 90 bp CTATATACTGAGGTAGCATTACTGAATTTGCCATACGAAACATCTTCACTTTCAGCCAACACGCTGAAGTaGGATGGTCCAAACTCTTTG +
Preference number: 4 (lower is better)
Translates to: LYTEVALLNLPYETSSLSANTLK*DGPNSL
Trigger: CAAAGAGTTTGGACCATCCCACTTCAGCGTGTTGGC...TGAAAGTGAAGATGTTTCGTATGGCAAATTCAGTAATGCTACCTCAGTATATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503787.6
CDS-3UTR TCA 90 bp GTAACATCCTCATCCTGGGAACATTCATTACCACTTAATAGCAAGATAACATTAGCTGGATATGGACTCTaGAGCAGAAGATGCTTCATG +
Preference number: 4 (lower is better)
Translates to: VTSSSWEHSLPLNSKITLAGYGL*SRRCFM
Trigger: CATGAAGCATCTTCTGCTTCAGAGTCCATATCCAGC...TAATGTTATCTTGCTATTAAGTGGTAATGAATGTTCCCAGGATGAGGATGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR TCA 90 bp CTATATACTGAGGTAGCATTACTGAATTTGCCATACGAAACATCTTCACTTTCACTCATCTGGCATTCTTaGGGCTATCCCTACAAATCC +
Preference number: 4 (lower is better)
Translates to: LYTEVALLNLPYETSSLSLIWHS*GYPYKS
Trigger: GGATTTGTAGGGATAGCCTCAAGAATGCCAGATGAG...TGAAAGTGAAGATGTTTCGTATGGCAAATTCAGTAATGCTACCTCAGTATATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR TCA 90 bp CTATATACTGAGGTAGCATTACTGAATTTGCCATACGAAACATCTTCACTTTCACTCATGCTCCTAACGTaGATGCATAAAACACCCCTG +
Preference number: 4 (lower is better)
Translates to: LYTEVALLNLPYETSSLSLMLLT*MHKTPL
Trigger: CAGGGGTGTTTTATGCATTCACGTTAGGAGCATGAG...TGAAAGTGAAGATGTTTCGTATGGCAAATTCAGTAATGCTACCTCAGTATATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR TCA 90 bp GTTGCAAAGGGCTTTTTATTCCATTCAACCCCTGTTCAATTTACAGGTGAGGAAATAGAGTCTGTAGGTTaGATAAGGCAGCCAAGATTA +
Preference number: 4 (lower is better)
Translates to: VAKGFLFHSTPVQFTGEEIESVG*IRQPRL
Trigger: TAATCTTGGCTGCCTTATTCAACCTACAGACTCTAT...TTCCTCACCTGTAAATTGAACAGGGGTTGAATGGAATAAAAAGCCCTTTGCAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR TCA 90 bp AAACATCTTCACTTTCATCCATCAGGTCAGAATTTGGGAGTCAAGTCACAGACTGATCAGGAGTTAGTATaGAGTATTCTTCTCTACGCA +
Preference number: 4 (lower is better)
Translates to: KHLHFHPSGQNLGVKSQTDQELV*SILLYA
Trigger: TGCGTAGAGAAGAATACTTCATACTAACTCCTGATC...AGTCTGTGACTTGACTCCCAAATTCTGACCTGATGGATGAAAGTGAAGATGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503787.6
CDS-3UTR GCA 90 bp AAACATCTTCACTTTCATCCATCAGGTCAGAATTTGGGAGTCAAGTCACAGACTTTTCAAATCTCCTCCTaGCTACTCTGCTTACCTAAA +
Preference number: 4 (lower is better)
Translates to: KHLHFHPSGQNLGVKSQTFQISS*LLCLPK
Trigger: TTTAGGTAAGCAGAGTAGGCAGGAGGAGATTTGAAA...AGTCTGTGACTTGACTCCCAAATTCTGACCTGATGGATGAAAGTGAAGATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp CACAGTGCTCTTGAATCCAAAGAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTAACAAGAAATCTAAATaGAGGTTCTCCTTCAGATCC +
Preference number: 4 (lower is better)
Translates to: HSALESKEWSSVLAFSSSNKKSK*RFSFRS
Trigger: GGATCTGAAGGAGAACCTGCATTTAGATTTCTTGTT...ACTTGATGAAAATGCCAACACACTAGACCACTCTTTGGATTCAAGAGCACTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503787.6
ENST00000515370.1
CDS-3UTR CCA 90 bp GAGAAGAAATGCCTTGTGACTCTAAGAGGTTCAGTGACTGCTGATCTACACTTTCTATTAGAAACGCAATaGCATTCTCATAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: EKKCLVTLRGSVTADLHFLLETQ*HSHRSS
Trigger: AGAGGATCTATGAGAATGCCATTGCGTTTCTAATAG...AAAGTGTAGATCAGCAGTCACTGAACCTCTTAGAGTCACAAGGCATTTCTTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp TGGCTACTCTTGATTTTTGCTTTGGGTAACATCCTCATCCTGGGAACATTCATTCTTGAATCCAAAGAGTaGTCTAGTGTGTTGGCATTT +
Preference number: 4 (lower is better)
Translates to: WLLLIFALGNILILGTFILESKE*SSVLAF
Trigger: AAATGCCAACACACTAGACCACTCTTTGGATTCAAG...AATGAATGTTCCCAGGATGAGGATGTTACCCAAAGCAAAAATCAAGAGTAGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296734.6
ENST00000503787.6
ENST00000515370.1
CDS-3UTR CCA 90 bp TACACAGTGCTCTTGAATCCAAAGAGTGGTCTAGTGTGTTGGCATTTTCATCAATATGTGTTTGTCCGCTaGTATTCCTATGAGGCATTT +
Preference number: 4 (lower is better)
Translates to: YTVLLNPKSGLVCWHFHQYVFVR*YSYEAF
Trigger: AAATGCCTCATAGGAATACCAGCGGACAAACACATA...TTGATGAAAATGCCAACACACTAGACCACTCTTTGGATTCAAGAGCACTGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp CTAAATACATTCATAGCTGGGTGGCTGGATATGGACTCTGAAGCAGAAGATGCTAGAATCTTAATCTTGTaGAAGATGGGGAAAGTTACT +
Preference number: 4 (lower is better)
Translates to: LNTFIAGWLDMDSEAEDARILIL*KMGKVT
Trigger: AGTAACTTTCCCCATCTTCCACAAGATTAAGATTCT...AGCATCTTCTGCTTCAGAGTCCATATCCAGCCACCCAGCTATGAATGTATTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503787.6
CDS-3UTR TCA 90 bp GAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTAGAAAATGTCAAGTTCTTTGGCTACTCTTaGTTTTTGCTTTGGGTAACA +
Preference number: 4 (lower is better)
Translates to: EWSSVLAFSSSTVLENVKFFGYS*FLLWVT
Trigger: TGTTACCCAAAGCAAAAATCAAGAGTAGCCAAAGAA...CTTGACATTTTCTAGGACTGTACTTGATGAAAATGCCAACACACTAGACCACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296734.6
ENST00000503787.6
ENST00000515370.1
CDS-3UTR TCA 90 bp TCCAAAGAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTAGAAAATTTTCAGCTATCAGAATaGTGCAGCATTGAATTCCTC +
Preference number: 4 (lower is better)
Translates to: SKEWSSVLAFSSSTVLENFQLSE*CSIEFL
Trigger: GAGGAATTCAATGCTGCATCATTCTGATAGCTGAAA...ATTTTCTAGGACTGTACTTGATGAAAATGCCAACACACTAGACCACTCTTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR TCA 90 bp CTTGAATCCAAAGAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTACCTTGGTTCCTTCTTTaGAGAATCAACAAGAAATCT +
Preference number: 4 (lower is better)
Translates to: LESKEWSSVLAFSSSTVLPWFLL*RINKKS
Trigger: AGATTTCTTGTTGATTCTTCAAAGAAGGAACCAAGG...TAGGACTGTACTTGATGAAAATGCCAACACACTAGACCACTCTTTGGATTCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503787.6
ENST00000515370.1
CDS-3UTR GCA 90 bp TATACTGAGGTAGCATTACTGAATTTGCCATACGAAACATCTTCACTTTCATCCCTTTGGGAGAAGAAATaGCTTGTGACTCTAAGAGGT +
Preference number: 4 (lower is better)
Translates to: YTEVALLNLPYETSSLSSLWEKK*LVTLRG
Trigger: ACCTCTTAGAGTCACAAGGCATTTCTTCTCCCAAAG...GGATGAAAGTGAAGATGTTTCGTATGGCAAATTCAGTAATGCTACCTCAGTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp CTTGAATCCAAAGAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTACTATTAGAAACGCAATaGCATTCTCATAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: LESKEWSSVLAFSSSTVLLLETQ*HSHRSS
Trigger: AGAGGATCTATGAGAATGCCATTGCGTTTCTAATAG...TAGGACTGTACTTGATGAAAATGCCAACACACTAGACCACTCTTTGGATTCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296734.6
ENST00000503787.6
ENST00000515370.1
3UTR CAA 72 bp TTCATGTTGATTCTTTGGCTACTCTTGATTTTTGCTTaGGGTAACATCCTCATCCTGGGAACATTCATTACC +
Preference number: 4 (lower is better)
Translates to: FMLILWLLLIFA*GNILILGTFIT
Trigger: GGTAATGAATGTTCCCAGGATGAGGATGTTACCCAAAGCAAAAATCAAGAGTAGCCAAAGAATCAACATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296734.6
ENST00000503787.6
ENST00000515370.1
CDS-3UTR TCA 90 bp TCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTAGAAAATGTCAAGTTGAACTTTCAGCTATCAGAATaGTGCAGCATTGAATTCCTC +
Preference number: 4 (lower is better)
Translates to: SSVLAFSSSTVLENVKLNFQLSE*CSIEFL
Trigger: GAGGAATTCAATGCTGCATCATTCTGATAGCTGAAA...GTTCAACTTGACATTTTCTAGGACTGTACTTGATGAAAATGCCAACACACTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR TCA 90 bp TCCAAAGAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTAGAAAATACTTTAGGACTTGTATaGTCACCCCCTTTTTATACT +
Preference number: 4 (lower is better)
Translates to: SKEWSSVLAFSSSTVLENTLGLV*SPPFYT
Trigger: AGTATAAAAAGGGGGTGATCATACAAGTCCTAAAGT...ATTTTCTAGGACTGTACTTGATGAAAATGCCAACACACTAGACCACTCTTTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR TCA 90 bp TCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTAGAAAATGTCAAGTTGAACTCAAGGCAATATGTATaGCACGCTTTCAAATCTCCT +
Preference number: 4 (lower is better)
Translates to: SSVLAFSSSTVLENVKLNSRQYV*HAFKSP
Trigger: AGGAGATTTGAAAGCGTGTCATACATATTGCCTTGA...GTTCAACTTGACATTTTCTAGGACTGTACTTGATGAAAATGCCAACACACTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp TCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTAGAAAATGTCAAGTTGAACTTTCAAATCTCCTCCTaGCTACTCTGCTTACCTAAA +
Preference number: 4 (lower is better)
Translates to: SSVLAFSSSTVLENVKLNFQISS*LLCLPK
Trigger: TTTAGGTAAGCAGAGTAGGCAGGAGGAGATTTGAAA...GTTCAACTTGACATTTTCTAGGACTGTACTTGATGAAAATGCCAACACACTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp TCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTAGAAAATGTCAAGTTGAACAGTGGTCTAGTGTGTTaGCATTTTCATCAAGTACAG +
Preference number: 4 (lower is better)
Translates to: SSVLAFSSSTVLENVKLNSGLVC*HFHQVQ
Trigger: CTGTACTTGATGAAAATGCCAACACACTAGACCACT...GTTCAACTTGACATTTTCTAGGACTGTACTTGATGAAAATGCCAACACACTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296734.6
ENST00000503787.6
ENST00000515370.1
CDS-3UTR CCA 90 bp TTGCTTTGGGTAACATCCTCATCCTGGGAACATTCATTACCACTTAATAGCAAGAGAATCTTAATCTTGTaGAAGATGGGGAAAGTTACT +
Preference number: 4 (lower is better)
Translates to: LLWVTSSSWEHSLPLNSKRILIL*KMGKVT
Trigger: AGTAACTTTCCCCATCTTCCACAAGATTAAGATTCT...CTTGCTATTAAGTGGTAATGAATGTTCCCAGGATGAGGATGTTACCCAAAGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503787.6
ENST00000515370.1
CDS-3UTR TCA 90 bp CTATATACTGAGGTAGCATTACTGAATTTGCCATACGAAACATCTTCACTTTCATCAAGGCAATATGTATaGCACGCTTTCAAATCTCCT +
Preference number: 4 (lower is better)
Translates to: LYTEVALLNLPYETSSLSSRQYV*HAFKSP
Trigger: AGGAGATTTGAAAGCGTGTCATACATATTGCCTTGA...TGAAAGTGAAGATGTTTCGTATGGCAAATTCAGTAATGCTACCTCAGTATATAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR GCA 90 bp CTATATACTGAGGTAGCATTACTGAATTTGCCATACGAAACATCTTCACTTTCATATAGACAGCAAAACTaGAAATACCTTTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LYTEVALLNLPYETSSLSYRQQN*KYLCSG
Trigger: CCCAGAGCAAAGGTATTTGCAGTTTTGCTGTCTATA...TGAAAGTGAAGATGTTTCGTATGGCAAATTCAGTAATGCTACCTCAGTATATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CCA 90 bp GTAACATCCTCATCCTGGGAACATTCATTACCACTTAATAGCAAGATAACATTACTTGAATCCAAAGAGTaGTCTAGTGTGTTGGCATTT +
Preference number: 4 (lower is better)
Translates to: VTSSSWEHSLPLNSKITLLESKE*SSVLAF
Trigger: AAATGCCAACACACTAGACCACTCTTTGGATTCAAG...TAATGTTATCTTGCTATTAAGTGGTAATGAATGTTCCCAGGATGAGGATGTTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296734.6
ENST00000503787.6
ENST00000515370.1
CDS-3UTR TCA 90 bp GTAACATCCTCATCCTGGGAACATTCATTACCACTTAATAGCAAGATAACATTATTCTTTGGCTACTCTTaGTTTTTGCTTTGGGTAACA +
Preference number: 4 (lower is better)
Translates to: VTSSSWEHSLPLNSKITLFFGYS*FLLWVT
Trigger: TGTTACCCAAAGCAAAAATCAAGAGTAGCCAAAGAA...TAATGTTATCTTGCTATTAAGTGGTAATGAATGTTCCCAGGATGAGGATGTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296734.6
ENST00000503787.6
ENST00000515370.1
CDS-3UTR TCA 90 bp GTAACATCCTCATCCTGGGAACATTCATTACCACTTAATAGCAAGATAACATTAATGCAGAAACAAGACTaGAGGAAGATTGTCCAATAT +
Preference number: 4 (lower is better)
Translates to: VTSSSWEHSLPLNSKITLMQKQD*RKIVQY
Trigger: ATATTGGACAATCTTCCTTCAGTCTTGTTTCTGCAT...TAATGTTATCTTGCTATTAAGTGGTAATGAATGTTCCCAGGATGAGGATGTTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
3UTR CAA 72 bp TATACAGAACTATATACTGAGGTAGCATTACTGAATTaGCCATACGAAACATCTTCACTTTCATCCATCAGG +
Preference number: 4 (lower is better)
Translates to: YTELYTEVALLN*PYETSSLSSIR
Trigger: CCTGATGGATGAAAGTGAAGATGTTTCGTATGGCAAATTCAGTAATGCTACCTCAGTATATAGTTCTGTATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp GCAGTGGGGAGTCTCTGCTGCCCATGTGGTGCTGGCATATGCAGTTCTGCTCATCTGGGACAGTCCTGGTaGTTCCCAGTGCAGCTCCAT +
Preference number: 5 (lower is better)
Translates to: AVGSLCCPCGAGICSSAHLGQSW*FPVQLH
Trigger: ATGGAGCTGCACTGGGAACAACCAGGACTGTCCCAG...ATGAGCAGAACTGCATATGCCAGCACCACATGGGCAGCAGAGACTCCCCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp CATCTGGCAGTGGGGAGTCTCTGCTGCCCATGTGGTGCTGGCATATGCAGTTCTGCAAGAGGCTCCATGTaGGAGGATTCTAGAGGGAAG +
Preference number: 5 (lower is better)
Translates to: HLAVGSLCCPCGAGICSSARGSM*EDSRGK
Trigger: CTTCCCTCTAGAATCCTCCAACATGGAGCCTCTTGC...AGAACTGCATATGCCAGCACCACATGGGCAGCAGAGACTCCCCACTGCCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp ACGCAGCTGGCGAGAGGTAGGAGCAGGCTTTCTGACACACTCATCTGGCATTCTTGCAATCTTGGCTCATaGCAACCTCAGCCTCCTGTT +
Preference number: 5 (lower is better)
Translates to: TQLARGRSRLSDTLIWHSCNLGS*QPQPPV
Trigger: AACAGGAGGCTGAGGTTGCAATGAGCCAAGATTGCA...AGAATGCCAGATGAGTGTGTCAGAAAGCCTGCTCCTACCTCTCGCCAGCTGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp ACGCAGCTGGCGAGAGGTAGGAGCAGGCTTTCTGACACACTCATCTGGCATTCTCAGAATGATGCAGCATaGAATTCCTCCCAAGTGGCT +
Preference number: 5 (lower is better)
Translates to: TQLARGRSRLSDTLIWHSQNDAA*NSSQVA
Trigger: AGCCACTTGGGAGGAATTCAATGCTGCATCATTCTG...AGAATGCCAGATGAGTGTGTCAGAAAGCCTGCTCCTACCTCTCGCCAGCTGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp GGTAGCAGCACATCAGCAAATGACTCCGCTCCCTCTCTCAGCACACATAGCCTAGATGGTCCAAACTCTTaGTGCAGTTCCTTCAGCCCT +
Preference number: 5 (lower is better)
Translates to: GSSTSANDSAPSLSTHSLDGPNS*CSSFSP
Trigger: AGGGCTGAAGGAACTGCACAAAGAGTTTGGACCATC...TAGGCTATGTGTGCTGAGAGAGGGAGCGGAGTCATTTGCTGATGTGCTGCTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503787.6
CDS CCA 90 bp GTCCAGAGCTGCTATGTCAGGCCTGATGACTTCAATGGGCTCCTCTaGCTTCCAGAACTTCACAACTTGACCCTCAGGGTTGACAAGATA +
Preference number: 5 (lower is better)
Translates to: VQSCYVRPDDFNGLL*LPELHNLTLRVDKI
Trigger: TATCTTGTCAACCCTGAGGGTCAAGTTGTGAAGTTCTGGAAGCCAGAGGAGCCCATTGAAGTCATCAGGCCTGACATAGCAGCTCTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502733.1
CDS-3UTR CAA 90 bp CATCTGGCAGTGGGGAGTCTCTGCTGCCCATGTGGTGCTGGCATATGCAGTTCTTTAACCTTCACCAACTaGGCAGGTTGCTTTGTTAGT +
Preference number: 5 (lower is better)
Translates to: HLAVGSLCCPCGAGICSSLTFTN*AGCFVS
Trigger: ACTAACAAAGCAACCTGCCAAGTTGGTGAAGGTTAA...AGAACTGCATATGCCAGCACCACATGGGCAGCAGAGACTCCCCACTGCCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp ACGCAGCTGGCGAGAGGTAGGAGCAGGCTTTCTGACACACTCATCTGGCATTCTCCACTTTATCTGGCTTaGGAGAGAGCTAGTGACTTA +
Preference number: 5 (lower is better)
Translates to: TQLARGRSRLSDTLIWHSPLYLA*ERASDL
Trigger: TAAGTCACTAGCTCTCTCCAAAGCCAGATAAAGTGG...AGAATGCCAGATGAGTGTGTCAGAAAGCCTGCTCCTACCTCTCGCCAGCTGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp CATCTGGCAGTGGGGAGTCTCTGCTGCCCATGTGGTGCTGGCATATGCAGTTCTTTTTCCTCTATGTGTTaGTCCGCTGGTATTCCTATG +
Preference number: 5 (lower is better)
Translates to: HLAVGSLCCPCGAGICSSFSSMC*SAGIPM
Trigger: CATAGGAATACCAGCGGACAAACACATAGAGGAAAA...AGAACTGCATATGCCAGCACCACATGGGCAGCAGAGACTCCCCACTGCCAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS CCA 90 bp AACCAGAGCTGCTATGTCAGGCCTGATGACTTCAATGGGCTCCTCTaGCTTCCAGAACTTCACAACTTGACCCTCAGGGTTGACAAGATA +
Preference number: 5 (lower is better)
Translates to: NQSCYVRPDDFNGLL*LPELHNLTLRVDKI
Trigger: TATCTTGTCAACCCTGAGGGTCAAGTTGTGAAGTTCTGGAAGCCAGAGGAGCCCATTGAAGTCATCAGGCCTGACATAGCAGCTCTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296734.6
ENST00000503787.6
ENST00000506123.5
ENST00000514317.1
ENST00000515370.1
CDS-3UTR CAA 90 bp CGAGAGGTAGGAGCAGGCTTTCTGACACACTCATCTGGCATTCTTGAGGCTATCAAACTGCAAATACCTTaGCTCTGGGCCCGGAACATT +
Preference number: 5 (lower is better)
Translates to: REVGAGFLTHSSGILEAIKLQIP*LWARNI
Trigger: AATGTTCCGGGCCCAGAGCAAAGGTATTTGCAGTTT...GATAGCCTCAAGAATGCCAGATGAGTGTGTCAGAAAGCCTGCTCCTACCTCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp ACGCAGCTGGCGAGAGGTAGGAGCAGGCTTTCTGACACACTCATCTGGCATTCTTCATACACAGTGCTCTaGAATCCAAAGAGTGGTCTA +
Preference number: 5 (lower is better)
Translates to: TQLARGRSRLSDTLIWHSSYTVL*NPKSGL
Trigger: TAGACCACTCTTTGGATTCAAGAGCACTGTGTATGA...AGAATGCCAGATGAGTGTGTCAGAAAGCCTGCTCCTACCTCTCGCCAGCTGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp GAGGCATTTGAGTTACAGGTAGCAGCACATCAGCAAATGACTCCGCTCCCTCTCTCCCTACAAATCCTCTaGACCTCTGGTAGAAATTCC +
Preference number: 5 (lower is better)
Translates to: EAFELQVAAHQQMTPLPLSLQIL*TSGRNS
Trigger: GGAATTTCTACCAGAGGTCAAGAGGATTTGTAGGGA...GAGAGGGAGCGGAGTCATTTGCTGATGTGCTGCTACCTGTAACTCAAATGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp GAGAAGAAATGCCTTGTGACTCTAAGAGGTTCAGTGACTGCTGATCTACACTTTCTGGGACAGTCCTGGTaGTTCCCAGTGCAGCTCCAT +
Preference number: 5 (lower is better)
Translates to: EKKCLVTLRGSVTADLHFLGQSW*FPVQLH
Trigger: ATGGAGCTGCACTGGGAACAACCAGGACTGTCCCAG...AAAGTGTAGATCAGCAGTCACTGAACCTCTTAGAGTCACAAGGCATTTCTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp GAGGCATTTGAGTTACAGGTAGCAGCACATCAGCAAATGACTCCGCTCCCTCTCTTCATCTGTATCATGTaGACTGGGACAGTCCTGGTT +
Preference number: 5 (lower is better)
Translates to: EAFELQVAAHQQMTPLPLFICIM*TGTVLV
Trigger: AACCAGGACTGTCCCAGTCAACATGATACAGATGAA...GAGAGGGAGCGGAGTCATTTGCTGATGTGCTGCTACCTGTAACTCAAATGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp CTAAATACATTCATAGCTGGGTGGCTGGATATGGACTCTGAAGCAGAAGATGCTATTCTACTTCCTTGCTaGGGCGGGGCTCCGATTCTC +
Preference number: 5 (lower is better)
Translates to: LNTFIAGWLDMDSEAEDAILLPC*GGAPIL
Trigger: GAGAATCGGAGCCCCGCCCAAGCAAGGAAGTAGAAT...AGCATCTTCTGCTTCAGAGTCCATATCCAGCCACCCAGCTATGAATGTATTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503787.6
CDS-3UTR CAA 90 bp GACTTGCCTAAAGTCACGCAGCTGGCGAGAGGTAGGAGCAGGCTTTCTGACACAGTAGCATTACTGAATTaGCCATACGAAACATCTTCA +
Preference number: 5 (lower is better)
Translates to: DLPKVTQLARGRSRLSDTVALLN*PYETSS
Trigger: TGAAGATGTTTCGTATGGCAAATTCAGTAATGCTAC...TGTGTCAGAAAGCCTGCTCCTACCTCTCGCCAGCTGCGTGACTTTAGGCAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp CAGTTATTCCAGAAATTTCAGTCATACACAGTGCTCTTGAATCCAAAGAGTGGTCTCTGGCACCAACACTaGGAGGGGCCACCTGAGCAT +
Preference number: 5 (lower is better)
Translates to: QLFQKFQSYTVLLNPKSGLWHQH*EGPPEH
Trigger: ATGCTCAGGTGGCCCCTCCAAGTGTTGGTGCCAGAG...ACCACTCTTTGGATTCAAGAGCACTGTGTATGACTGAAATTTCTGGAATAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp GAGGCATTTGAGTTACAGGTAGCAGCACATCAGCAAATGACTCCGCTCCCTCTCTTTTCCTCTATGTGTTaGTCCGCTGGTATTCCTATG +
Preference number: 5 (lower is better)
Translates to: EAFELQVAAHQQMTPLPLFSSMC*SAGIPM
Trigger: CATAGGAATACCAGCGGACAAACACATAGAGGAAAA...GAGAGGGAGCGGAGTCATTTGCTGATGTGCTGCTACCTGTAACTCAAATGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS TCA 90 bp TGGGCTCCTCTGGCTTCCAGAACTTCACAACTTGACCCTCAGGGTTaGCAAGATACTTCCAAAAATTCCACCTTGGTTCCTTCTTTGAAG +
Preference number: 5 (lower is better)
Translates to: WAPLASRTSQLDPQG*QDTSKNSTLVPSLK
Trigger: CTTCAAAGAAGGAACCAAGGTGGAATTTTTGGAAGTATCTTGTCAACCCTGAGGGTCAAGTTGTGAAGTTCTGGAAGCCAGAGGAGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296734.6
ENST00000502733.1
ENST00000503787.6
ENST00000506123.5
ENST00000514317.1
ENST00000515370.1
CDS TCA 90 bp CTGATGACTTCAATGGGCTCCTCTGGCTTCCAGAACTTCACAACTTaGCCCTCAGGGTTGACAAGATACTTCCAAAAATTCCACCTTGGT +
Preference number: 5 (lower is better)
Translates to: LMTSMGSSGFQNFTT*PSGLTRYFQKFHLG
Trigger: ACCAAGGTGGAATTTTTGGAAGTATCTTGTCAACCCTGAGGGTCAAGTTGTGAAGTTCTGGAAGCCAGAGGAGCCCATTGAAGTCATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296734.6
ENST00000502733.1
ENST00000503787.6
ENST00000506123.5
ENST00000514317.1
ENST00000515370.1
CDS-3UTR CAA 90 bp CGAGAGGTAGGAGCAGGCTTTCTGACACACTCATCTGGCATTCTTGAGGCTATCACTTGGCAGGTTGCTTaGTTAGTCAATTATAAGGCT +
Preference number: 5 (lower is better)
Translates to: REVGAGFLTHSSGILEAITWQVA*LVNYKA
Trigger: AGCCTTATAATTGACTAACAAAGCAACCTGCCAAGT...GATAGCCTCAAGAATGCCAGATGAGTGTGTCAGAAAGCCTGCTCCTACCTCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp ATTTTTCTGTTACAGTCCTTAGCCCAGGCATCCTGTAGCACTCTGTGTCCCAGAACTCATCTGGCATTCTaGAGGCTATCCCTACAAATC +
Preference number: 5 (lower is better)
Translates to: IFLLQSLAQASCSTLCPRTHLAF*RLSLQI
Trigger: GATTTGTAGGGATAGCCTCAAGAATGCCAGATGAGT...TCTGGGACACAGAGTGCTACAGGATGCCTGGGCTAAGGACTGTAACAGAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp TTTGTCCGCTGGTATTCCTATGAGGCATTTGAGTTACAGGTAGCAGCACATCAGAGGTACTTAAGTGACTaGCCTAAAGTCACGCAGCTG +
Preference number: 5 (lower is better)
Translates to: FVRWYSYEAFELQVAAHQRYLSD*PKVTQL
Trigger: CAGCTGCGTGACTTTAGGCAAGTCACTTAAGTACCT...CTGATGTGCTGCTACCTGTAACTCAAATGCCTCATAGGAATACCAGCGGACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp ATTTTTCTGTTACAGTCCTTAGCCCAGGCATCCTGTAGCACTCTGTGTCCCAGAAAAGGACAGATAGGCTaGTTGGTGGCTTCTGTTTTC +
Preference number: 5 (lower is better)
Translates to: IFLLQSLAQASCSTLCPRKGQIG*LVASVF
Trigger: GAAAACAGAAGCCACCAACAAGCCTATCTGTCCTTT...TCTGGGACACAGAGTGCTACAGGATGCCTGGGCTAAGGACTGTAACAGAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp ATTTTTCTGTTACAGTCCTTAGCCCAGGCATCCTGTAGCACTCTGTGTCCCAGAGCTCTTGGAGCAAAATaGCAAAGGACAGATAGGCTT +
Preference number: 5 (lower is better)
Translates to: IFLLQSLAQASCSTLCPRALGAK*QRTDRL
Trigger: AAGCCTATCTGTCCTTTGCAATTTTGCTCCAAGAGC...TCTGGGACACAGAGTGCTACAGGATGCCTGGGCTAAGGACTGTAACAGAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp GTTGCAAAGGGCTTTTTATTCCATTCAACCCCTGTTCAATTTACAGGTGAGGAAGCAAGAGGCTCCATGTaGGAGGATTCTAGAGGGAAG +
Preference number: 5 (lower is better)
Translates to: VAKGFLFHSTPVQFTGEEARGSM*EDSRGK
Trigger: CTTCCCTCTAGAATCCTCCAACATGGAGCCTCTTGC...TTCCTCACCTGTAAATTGAACAGGGGTTGAATGGAATAAAAAGCCCTTTGCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp TGGCTACTCTTGATTTTTGCTTTGGGTAACATCCTCATCCTGGGAACATTCATTGCAAGAGGCTCCATGTaGGAGGATTCTAGAGGGAAG +
Preference number: 5 (lower is better)
Translates to: WLLLIFALGNILILGTFIARGSM*EDSRGK
Trigger: CTTCCCTCTAGAATCCTCCAACATGGAGCCTCTTGC...AATGAATGTTCCCAGGATGAGGATGTTACCCAAAGCAAAAATCAAGAGTAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296734.6
ENST00000503787.6
ENST00000515370.1
CDS-3UTR CAA 90 bp CTATATACTGAGGTAGCATTACTGAATTTGCCATACGAAACATCTTCACTTTCACTCTGGCACCAACACTaGGAGGGGCCACCTGAGCAT +
Preference number: 5 (lower is better)
Translates to: LYTEVALLNLPYETSSLSLWHQH*EGPPEH
Trigger: ATGCTCAGGTGGCCCCTCCAAGTGTTGGTGCCAGAG...TGAAAGTGAAGATGTTTCGTATGGCAAATTCAGTAATGCTACCTCAGTATATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp GCAGGCTTTCTGACACACTCATCTGGCATTCTTGAGGCTATCCCTACAAATCCTCATAGAGTCTGTAGGTaGAATAAGGCAGCCAAGATT +
Preference number: 5 (lower is better)
Translates to: AGFLTHSSGILEAIPTNPHRVCR*NKAAKI
Trigger: AATCTTGGCTGCCTTATTCAACCTACAGACTCTATG...AGGATTTGTAGGGATAGCCTCAAGAATGCCAGATGAGTGTGTCAGAAAGCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp CACAGTGCTCTTGAATCCAAAGAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTGATGGTCCAAACTCTTaGTGCAGTTCCTTCAGCCCT +
Preference number: 5 (lower is better)
Translates to: HSALESKEWSSVLAFSSSDGPNS*CSSFSP
Trigger: AGGGCTGAAGGAACTGCACAAAGAGTTTGGACCATC...ACTTGATGAAAATGCCAACACACTAGACCACTCTTTGGATTCAAGAGCACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503787.6
ENST00000515370.1
CDS-3UTR CAA 90 bp TCCAAAGAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTAGAAAATATTCTACTTCCTTGCTaGGGCGGGGCTCCGATTCTC +
Preference number: 5 (lower is better)
Translates to: SKEWSSVLAFSSSTVLENILLPC*GGAPIL
Trigger: GAGAATCGGAGCCCCGCCCAAGCAAGGAAGTAGAAT...ATTTTCTAGGACTGTACTTGATGAAAATGCCAACACACTAGACCACTCTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503787.6
ENST00000515370.1
CDS-3UTR CAA 90 bp TTGCTTTGGGTAACATCCTCATCCTGGGAACATTCATTACCACTTAATAGCAAGAAAGATTCTACTTCCTaGCTTGGGCGGGGCTCCGAT +
Preference number: 5 (lower is better)
Translates to: LLWVTSSSWEHSLPLNSKKDSTS*LGRGSD
Trigger: ATCGGAGCCCCGCCCAAGCAAGGAAGTAGAATCTTT...CTTGCTATTAAGTGGTAATGAATGTTCCCAGGATGAGGATGTTACCCAAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503787.6
ENST00000515370.1
CDS-3UTR CAA 90 bp CTAAATACATTCATAGCTGGGTGGCTGGATATGGACTCTGAAGCAGAAGATGCTGCTCTTGGAGCAAAATaGCAAAGGACAGATAGGCTT +
Preference number: 5 (lower is better)
Translates to: LNTFIAGWLDMDSEAEDAALGAK*QRTDRL
Trigger: AAGCCTATCTGTCCTTTGCAATTTTGCTCCAAGAGC...AGCATCTTCTGCTTCAGAGTCCATATCCAGCCACCCAGCTATGAATGTATTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp GTTGCAAAGGGCTTTTTATTCCATTCAACCCCTGTTCAATTTACAGGTGAGGAATGCAATCTTGGCTCATaGCAACCTCAGCCTCCTGTT +
Preference number: 5 (lower is better)
Translates to: VAKGFLFHSTPVQFTGEECNLGS*QPQPPV
Trigger: AACAGGAGGCTGAGGTTGCAATGAGCCAAGATTGCA...TTCCTCACCTGTAAATTGAACAGGGGTTGAATGGAATAAAAAGCCCTTTGCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp TACACAGTGCTCTTGAATCCAAAGAGTGGTCTAGTGTGTTGGCATTTTCATCAAATTTCTGTCTGTGAGTaGGCAGTCACTGGCCACGTT +
Preference number: 5 (lower is better)
Translates to: YTVLLNPKSGLVCWHFHQISVCE*AVTGHV
Trigger: AACGTGGCCAGTGACTGCCAACTCACAGACAGAAAT...TTGATGAAAATGCCAACACACTAGACCACTCTTTGGATTCAAGAGCACTGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503787.6
ENST00000515370.1
CDS-3UTR CAA 90 bp AAATTTCAGTCATACACAGTGCTCTTGAATCCAAAGAGTGGTCTAGTGTGTTGGATTTCTGTCTGTGAGTaGGCAGTCACTGGCCACGTT +
Preference number: 5 (lower is better)
Translates to: KFQSYTVLLNPKSGLVCWISVCE*AVTGHV
Trigger: AACGTGGCCAGTGACTGCCAACTCACAGACAGAAAT...CCAACACACTAGACCACTCTTTGGATTCAAGAGCACTGTGTATGACTGAAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503787.6
ENST00000515370.1
CDS-3UTR CAA 90 bp TGGCTACTCTTGATTTTTGCTTTGGGTAACATCCTCATCCTGGGAACATTCATTCAACTAGTGAAACCTTaGCTCTGGGCCCGGAACATT +
Preference number: 5 (lower is better)
Translates to: WLLLIFALGNILILGTFIQLVKP*LWARNI
Trigger: AATGTTCCGGGCCCAGAGCAAAGGTTTCACTAGTTG...AATGAATGTTCCCAGGATGAGGATGTTACCCAAAGCAAAAATCAAGAGTAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515370.1
CDS-3UTR CAA 90 bp AAACATCTTCACTTTCATCCATCAGGTCAGAATTTGGGAGTCAAGTCACAGACTAAACTGCAAATACCTTaGCTCTGGGCCCGGAACATT +
Preference number: 5 (lower is better)
Translates to: KHLHFHPSGQNLGVKSQTKLQIP*LWARNI
Trigger: AATGTTCCGGGCCCAGAGCAAAGGTATTTGCAGTTT...AGTCTGTGACTTGACTCCCAAATTCTGACCTGATGGATGAAAGTGAAGATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp GAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTAGAAAATGTCAAGCAGAATGATGCAGCATaGAATTCCTCCCAAGTGGCT +
Preference number: 5 (lower is better)
Translates to: EWSSVLAFSSSTVLENVKQNDAA*NSSQVA
Trigger: AGCCACTTGGGAGGAATTCAATGCTGCATCATTCTG...CTTGACATTTTCTAGGACTGTACTTGATGAAAATGCCAACACACTAGACCACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp TTTGTCCGCTGGTATTCCTATGAGGCATTTGAGTTACAGGTAGCAGCACATCAGACTTGGCAGGTTGCTTaGTTAGTCAATTATAAGGCT +
Preference number: 5 (lower is better)
Translates to: FVRWYSYEAFELQVAAHQTWQVA*LVNYKA
Trigger: AGCCTTATAATTGACTAACAAAGCAACCTGCCAAGT...CTGATGTGCTGCTACCTGTAACTCAAATGCCTCATAGGAATACCAGCGGACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp TCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTAGAAAATGTCAAGTTGAACAAAGATTCTACTTCCTaGCTTGGGCGGGGCTCCGAT +
Preference number: 5 (lower is better)
Translates to: SSVLAFSSSTVLENVKLNKDSTS*LGRGSD
Trigger: ATCGGAGCCCCGCCCAAGCAAGGAAGTAGAATCTTT...GTTCAACTTGACATTTTCTAGGACTGTACTTGATGAAAATGCCAACACACTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503787.6
ENST00000515370.1
CDS CCA 90 bp ATTCCAGAAATTTCAGTCATACACAGTGCTCTTGAATCCAAAGAGTaGTCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: IPEISVIHSALESKE*SSVLAFSSSTVQSC
Trigger: GCAGCTCTGGACTGTACTTGATGAAAATGCCAACACACTAGACCACTCTTTGGATTCAAGAGCACTGTGTATGACTGAAATTTCTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502733.1
CDS-3UTR CAA 90 bp TTCAAGGCAATATGTATGACACGCTTTCAAATCTCCTCCTGCCTACTCTGCTTATCATACACAGTGCTCTaGAATCCAAAGAGTGGTCTA +
Preference number: 5 (lower is better)
Translates to: FKAICMTRFQISSCLLCLSYTVL*NPKSGL
Trigger: TAGACCACTCTTTGGATTCAAGAGCACTGTGTATGA...TAAGCAGAGTAGGCAGGAGGAGATTTGAAAGCGTGTCATACATATTGCCTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp TTCAAGGCAATATGTATGACACGCTTTCAAATCTCCTCCTGCCTACTCTGCTTATTAACCTTCACCAACTaGGCAGGTTGCTTTGTTAGT +
Preference number: 5 (lower is better)
Translates to: FKAICMTRFQISSCLLCLLTFTN*AGCFVS
Trigger: ACTAACAAAGCAACCTGCCAAGTTGGTGAAGGTTAA...TAAGCAGAGTAGGCAGGAGGAGATTTGAAAGCGTGTCATACATATTGCCTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp TTGCTTTGGGTAACATCCTCATCCTGGGAACATTCATTACCACTTAATAGCAAGTCCCTACAAATCCTCTaGACCTCTGGTAGAAATTCC +
Preference number: 5 (lower is better)
Translates to: LLWVTSSSWEHSLPLNSKSLQIL*TSGRNS
Trigger: GGAATTTCTACCAGAGGTCAAGAGGATTTGTAGGGA...CTTGCTATTAAGTGGTAATGAATGTTCCCAGGATGAGGATGTTACCCAAAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp GAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTAGAAAATGTCAAGAAAGGACAGATAGGCTaGTTGGTGGCTTCTGTTTTC +
Preference number: 5 (lower is better)
Translates to: EWSSVLAFSSSTVLENVKKGQIG*LVASVF
Trigger: GAAAACAGAAGCCACCAACAAGCCTATCTGTCCTTT...CTTGACATTTTCTAGGACTGTACTTGATGAAAATGCCAACACACTAGACCACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp AAATTTCAGTCATACACAGTGCTCTTGAATCCAAAGAGTGGTCTAGTGTGTTGGGGCTCAGAATTCAAATaGCTAATAGGCTCTTGGAGC +
Preference number: 5 (lower is better)
Translates to: KFQSYTVLLNPKSGLVCWGSEFK*LIGSWS
Trigger: GCTCCAAGAGCCTATTAGCAATTTGAATTCTGAGCC...CCAACACACTAGACCACTCTTTGGATTCAAGAGCACTGTGTATGACTGAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp TGGCTACTCTTGATTTTTGCTTTGGGTAACATCCTCATCCTGGGAACATTCATTGGCTCAGAATTCAAATaGCTAATAGGCTCTTGGAGC +
Preference number: 5 (lower is better)
Translates to: WLLLIFALGNILILGTFIGSEFK*LIGSWS
Trigger: GCTCCAAGAGCCTATTAGCAATTTGAATTCTGAGCC...AATGAATGTTCCCAGGATGAGGATGTTACCCAAAGCAAAAATCAAGAGTAGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp AAATTTCAGTCATACACAGTGCTCTTGAATCCAAAGAGTGGTCTAGTGTGTTGGTTCATCTGTATCATGTaGACTGGGACAGTCCTGGTT +
Preference number: 5 (lower is better)
Translates to: KFQSYTVLLNPKSGLVCWFICIM*TGTVLV
Trigger: AACCAGGACTGTCCCAGTCAACATGATACAGATGAA...CCAACACACTAGACCACTCTTTGGATTCAAGAGCACTGTGTATGACTGAAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp GAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTAGAAAATGTCAAGCCACTTTATCTGGCTTaGGAGAGAGCTAGTGACTTA +
Preference number: 5 (lower is better)
Translates to: EWSSVLAFSSSTVLENVKPLYLA*ERASDL
Trigger: TAAGTCACTAGCTCTCTCCAAAGCCAGATAAAGTGG...CTTGACATTTTCTAGGACTGTACTTGATGAAAATGCCAACACACTAGACCACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp TGGCTACTCTTGATTTTTGCTTTGGGTAACATCCTCATCCTGGGAACATTCATTCTCTTGATTTTTGCTTaGGGTAACATCCTCATCCTG +
Preference number: 5 (lower is better)
Translates to: WLLLIFALGNILILGTFILLIFA*GNILIL
Trigger: CAGGATGAGGATGTTACCCAAAGCAAAAATCAAGAG...AATGAATGTTCCCAGGATGAGGATGTTACCCAAAGCAAAAATCAAGAGTAGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296734.6
ENST00000503787.6
ENST00000515370.1
CDS-3UTR CAA 90 bp GAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTAGAAAATGTCAAGCTCTTGATTTTTGCTTaGGGTAACATCCTCATCCTG +
Preference number: 5 (lower is better)
Translates to: EWSSVLAFSSSTVLENVKLLIFA*GNILIL
Trigger: CAGGATGAGGATGTTACCCAAAGCAAAAATCAAGAG...CTTGACATTTTCTAGGACTGTACTTGATGAAAATGCCAACACACTAGACCACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296734.6
ENST00000503787.6
ENST00000515370.1
CDS-3UTR CAA 90 bp CTTGAATCCAAAGAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTATCATACACAGTGCTCTaGAATCCAAAGAGTGGTCTA +
Preference number: 5 (lower is better)
Translates to: LESKEWSSVLAFSSSTVLSYTVL*NPKSGL
Trigger: TAGACCACTCTTTGGATTCAAGAGCACTGTGTATGA...TAGGACTGTACTTGATGAAAATGCCAACACACTAGACCACTCTTTGGATTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296734.6
ENST00000503787.6
ENST00000515370.1
CDS-3UTR CAA 90 bp GAGAAGAAATGCCTTGTGACTCTAAGAGGTTCAGTGACTGCTGATCTACACTTTTCCAAAAATTCCACCTaGGTTCCTTCTTTGAAGAAT +
Preference number: 5 (lower is better)
Translates to: EKKCLVTLRGSVTADLHFSKNST*VPSLKN
Trigger: ATTCTTCAAAGAAGGAACCAAGGTGGAATTTTTGGA...AAAGTGTAGATCAGCAGTCACTGAACCTCTTAGAGTCACAAGGCATTTCTTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp TCCAAAGAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTAGAAAATCTCTTGATTTTTGCTTaGGGTAACATCCTCATCCTG +
Preference number: 5 (lower is better)
Translates to: SKEWSSVLAFSSSTVLENLLIFA*GNILIL
Trigger: CAGGATGAGGATGTTACCCAAAGCAAAAATCAAGAG...ATTTTCTAGGACTGTACTTGATGAAAATGCCAACACACTAGACCACTCTTTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296734.6
ENST00000503787.6
ENST00000515370.1
CDS-3UTR CAA 90 bp GTAACATCCTCATCCTGGGAACATTCATTACCACTTAATAGCAAGATAACATTAAGGTACTTAAGTGACTaGCCTAAAGTCACGCAGCTG +
Preference number: 5 (lower is better)
Translates to: VTSSSWEHSLPLNSKITLRYLSD*PKVTQL
Trigger: CAGCTGCGTGACTTTAGGCAAGTCACTTAAGTACCT...TAATGTTATCTTGCTATTAAGTGGTAATGAATGTTCCCAGGATGAGGATGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp TGGCTACTCTTGATTTTTGCTTTGGGTAACATCCTCATCCTGGGAACATTCATTCCTAGAATCTTAATCTaGTGGAAGATGGGGAAAGTT +
Preference number: 5 (lower is better)
Translates to: WLLLIFALGNILILGTFIPRILI*WKMGKV
Trigger: AACTTTCCCCATCTTCCACAAGATTAAGATTCTAGG...AATGAATGTTCCCAGGATGAGGATGTTACCCAAAGCAAAAATCAAGAGTAGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503787.6
ENST00000515370.1
CDS-3UTR CAA 90 bp CTTGAATCCAAAGAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTACCTAGAATCTTAATCTaGTGGAAGATGGGGAAAGTT +
Preference number: 5 (lower is better)
Translates to: LESKEWSSVLAFSSSTVLPRILI*WKMGKV
Trigger: AACTTTCCCCATCTTCCACAAGATTAAGATTCTAGG...TAGGACTGTACTTGATGAAAATGCCAACACACTAGACCACTCTTTGGATTCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503787.6
ENST00000515370.1
CDS-3UTR CAA 90 bp GTTGCAAAGGGCTTTTTATTCCATTCAACCCCTGTTCAATTTACAGGTGAGGAATCCAAAAATTCCACCTaGGTTCCTTCTTTGAAGAAT +
Preference number: 5 (lower is better)
Translates to: VAKGFLFHSTPVQFTGEESKNST*VPSLKN
Trigger: ATTCTTCAAAGAAGGAACCAAGGTGGAATTTTTGGA...TTCCTCACCTGTAAATTGAACAGGGGTTGAATGGAATAAAAAGCCCTTTGCAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp TGGCTACTCTTGATTTTTGCTTTGGGTAACATCCTCATCCTGGGAACATTCATTTCCAAAAATTCCACCTaGGTTCCTTCTTTGAAGAAT +
Preference number: 5 (lower is better)
Translates to: WLLLIFALGNILILGTFISKNST*VPSLKN
Trigger: ATTCTTCAAAGAAGGAACCAAGGTGGAATTTTTGGA...AATGAATGTTCCCAGGATGAGGATGTTACCCAAAGCAAAAATCAAGAGTAGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296734.6
ENST00000503787.6
ENST00000515370.1
CDS-3UTR CAA 90 bp AAATTTCAGTCATACACAGTGCTCTTGAATCCAAAGAGTGGTCTAGTGTGTTGGATTCTTTGGCTACTCTaGATTTTTGCTTTGGGTAAC +
Preference number: 5 (lower is better)
Translates to: KFQSYTVLLNPKSGLVCWILWLL*IFALGN
Trigger: GTTACCCAAAGCAAAAATCAAGAGTAGCCAAAGAAT...CCAACACACTAGACCACTCTTTGGATTCAAGAGCACTGTGTATGACTGAAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296734.6
ENST00000503787.6
ENST00000515370.1
CDS-3UTR CAA 90 bp AAATTTCAGTCATACACAGTGCTCTTGAATCCAAAGAGTGGTCTAGTGTGTTGGTTGAACAATAAGATATaGAGGCACATTGGTCACTGT +
Preference number: 5 (lower is better)
Translates to: KFQSYTVLLNPKSGLVCWLNNKI*RHIGHC
Trigger: ACAGTGACCAATGTGCCTCAATATCTTATTGTTCAA...CCAACACACTAGACCACTCTTTGGATTCAAGAGCACTGTGTATGACTGAAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296734.6
ENST00000503787.6
ENST00000515370.1
CDS-3UTR CAA 90 bp TACACAGTGCTCTTGAATCCAAAGAGTGGTCTAGTGTGTTGGCATTTTCATCAATTGAACAATAAGATATaGAGGCACATTGGTCACTGT +
Preference number: 5 (lower is better)
Translates to: YTVLLNPKSGLVCWHFHQLNNKI*RHIGHC
Trigger: ACAGTGACCAATGTGCCTCAATATCTTATTGTTCAA...TTGATGAAAATGCCAACACACTAGACCACTCTTTGGATTCAAGAGCACTGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296734.6
ENST00000503787.6
ENST00000515370.1
CDS-3UTR CAA 90 bp GAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTAGAAAATGTCAAGTTGAACAATAAGATATaGAGGCACATTGGTCACTGT +
Preference number: 5 (lower is better)
Translates to: EWSSVLAFSSSTVLENVKLNNKI*RHIGHC
Trigger: ACAGTGACCAATGTGCCTCAATATCTTATTGTTCAA...CTTGACATTTTCTAGGACTGTACTTGATGAAAATGCCAACACACTAGACCACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296734.6
ENST00000503787.6
ENST00000515370.1
CDS-3UTR CAA 90 bp TCCAAAGAGTGGTCTAGTGTGTTGGCATTTTCATCAAGTACAGTCCTAGAAAATATTCTTTGGCTACTCTaGATTTTTGCTTTGGGTAAC +
Preference number: 5 (lower is better)
Translates to: SKEWSSVLAFSSSTVLENILWLL*IFALGN
Trigger: GTTACCCAAAGCAAAAATCAAGAGTAGCCAAAGAAT...ATTTTCTAGGACTGTACTTGATGAAAATGCCAACACACTAGACCACTCTTTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296734.6
ENST00000503787.6
ENST00000515370.1
CDS-3UTR CAA 90 bp GTAACATCCTCATCCTGGGAACATTCATTACCACTTAATAGCAAGATAACATTACATAGAGTCTGTAGGTaGAATAAGGCAGCCAAGATT +
Preference number: 5 (lower is better)
Translates to: VTSSSWEHSLPLNSKITLHRVCR*NKAAKI
Trigger: AATCTTGGCTGCCTTATTCAACCTACAGACTCTATG...TAATGTTATCTTGCTATTAAGTGGTAATGAATGTTCCCAGGATGAGGATGTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS-3UTR CAA 90 bp GTAACATCCTCATCCTGGGAACATTCATTACCACTTAATAGCAAGATAACATTAGTAGCATTACTGAATTaGCCATACGAAACATCTTCA +
Preference number: 5 (lower is better)
Translates to: VTSSSWEHSLPLNSKITLVALLN*PYETSS
Trigger: TGAAGATGTTTCGTATGGCAAATTCAGTAATGCTAC...TAATGTTATCTTGCTATTAAGTGGTAATGAATGTTCCCAGGATGAGGATGTTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296734.6
ENST00000503787.6
CDS CCA 72 bp TGCTATGTCAGGCCTGATGACTTCAATGGGCTCCTCTaGCTTCCAGAACTTCACAACTTGACCCTCAGGGTT +
Preference number: 6 (lower is better)
Translates to: CYVRPDDFNGLL*LPELHNLTLRV
Trigger: AACCCTGAGGGTCAAGTTGTGAAGTTCTGGAAGCCAGAGGAGCCCATTGAAGTCATCAGGCCTGACATAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296734.6
ENST00000502733.1
ENST00000503787.6
ENST00000506123.5
ENST00000514317.1
ENST00000515370.1
CDS CAA 90 bp CCTGATGACTTCAATGGGCTCCTCTGGCTTCCAGAACTTCACAACTaGACCCTCAGGGTTGACAAGATACTTCCAAAAATTCCACCTTGG +
Preference number: 6 (lower is better)
Translates to: PDDFNGLLWLPELHN*TLRVDKILPKIPPW
Trigger: CCAAGGTGGAATTTTTGGAAGTATCTTGTCAACCCTGAGGGTCAAGTTGTGAAGTTCTGGAAGCCAGAGGAGCCCATTGAAGTCATCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296734.6
ENST00000502733.1
ENST00000503787.6
ENST00000506123.5
ENST00000514317.1
ENST00000515370.1
CDS TCA 72 bp CTGGCTTCCAGAACTTCACAACTTGACCCTCAGGGTTaGCAAGATACTTCCAAAAATTCCACCTTGGTTCCT +
Preference number: 6 (lower is better)
Translates to: LASRTSQLDPQG*QDTSKNSTLVP
Trigger: AGGAACCAAGGTGGAATTTTTGGAAGTATCTTGTCAACCCTGAGGGTCAAGTTGTGAAGTTCTGGAAGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296734.6
ENST00000502733.1
ENST00000503787.6
ENST00000506123.5
ENST00000514317.1
ENST00000515370.1
CDS CAA 72 bp AAAGCCAACACGCTGAAGTGGGATGGTCCAAACTCTTaGTGCAGTTCCTTCAGCCTTTGCCTTTATACTTTT +
Preference number: 6 (lower is better)
Translates to: KANTLKWDGPNS*CSSFSLCLYTF
Trigger: AAAAGTATAAAGGCAAAGGCTGAAGGAACTGCACAAAGAGTTTGGACCATCCCACTTCAGCGTGTTGGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511617.5