RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPX3 (Homo sapiens)

Ensembl gene IDs: ENSG00000211445

Ensembl transcript IDs: ENST00000388825.9, ENST00000517973.1, ENST00000519214.5, ENST00000520059.1, ENST00000520597.1, ENST00000521632.1, ENST00000521650.5, ENST00000521722.5, ENST00000614343.4, ENST00000622181.4, ENST00000625178.1

Found 338 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCAGGCACGGAGGTGACATAGATGTAGCAAGGCGACCCTCGAGGTaGCAGTGGGGAGAAAGTGCGAGCTCGGGGAGAGAGACCTTCCTC +
Preference number: 1 (lower is better)
Translates to: LRHGGDIDVARRPSR*QWGESASSGRETFL
Trigger: GAGGAAGGTCTCTCTCCCCGAGCTCGCACTTTCTCCCCACTGCCACCTCGAGGGTCGCCTTGCTACATCTATGTCACCTCCGTGCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519214.5
3UTR TCA 90 bp CTACATGGTGGACATGGGATGAGACGGCCTTCAGTTACTTCCTCTTaGCCCCCAGGGCTGCCTGCCGCCTCATGTAGGACAGGATGTCCA +
Preference number: 1 (lower is better)
Translates to: LHGGHGMRRPSVTSS*PPGLPAASCRTGCP
Trigger: TGGACATCCTGTCCTACATGAGGCGGCAGGCAGCCCTGGGGGTCAAGAGGAAGTAACTGAAGGCCGTCTCATCCCATGTCCACCATGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517973.1
ENST00000614343.4
3UTR GCA 90 bp CCACATGCACCCACACCCACATGCCTGGCAGTACACAGAACTGTATaGATCCATTTGTGCCAGGCTGGGGCCTTGAGTGATAGGAAAGGG +
Preference number: 1 (lower is better)
Translates to: PHAPTPTCLAVHRTV*IHLCQAGALSDRKG
Trigger: CCCTTTCCTATCACTCAAGGCCCCAGCCTGGCACAAATGGATGCATACAGTTCTGTGTACTGCCAGGCATGTGGGTGTGGGTGCATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
3UTR CCA 90 bp CACGGATTTCTTCCTGAACAAAGTCCCTCCCCTACATGGTGGACATaGGATGAGACGGCCTTCAGTTACTTCCTCTTGACCCCCAGGGCT +
Preference number: 1 (lower is better)
Translates to: HGFLPEQSPSPTWWT*DETAFSYFLLTPRA
Trigger: AGCCCTGGGGGTCAAGAGGAAGTAACTGAAGGCCGTCTCATCCCATGTCCACCATGTAGGGGAGGGACTTTGTTCAGGAAGAAATCCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614343.4
3UTR CCA 90 bp TGGAGACACGGATTTCTTCCTGAACAAAGTCCCTCCCCTACATGGTaGACATGGGATGAGACGGCCTTCAGTTACTTCCTCTTGACCCCC +
Preference number: 1 (lower is better)
Translates to: WRHGFLPEQSPSPTW*TWDETAFSYFLLTP
Trigger: GGGGGTCAAGAGGAAGTAACTGAAGGCCGTCTCATCCCATGTCCACCATGTAGGGGAGGGACTTTGTTCAGGAAGAAATCCGTGTCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614343.4
3UTR CCA 90 bp GGTTGGAGACACGGATTTCTTCCTGAACAAAGTCCCTCCCCTACATaGTGGACATGGGATGAGACGGCCTTCAGTTACTTCCTCTTGACC +
Preference number: 1 (lower is better)
Translates to: GWRHGFLPEQSPSPT*WTWDETAFSYFLLT
Trigger: GGTCAAGAGGAAGTAACTGAAGGCCGTCTCATCCCATGTCCACCATGTAGGGGAGGGACTTTGTTCAGGAAGAAATCCGTGTCTCCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614343.4
3UTR CCA 90 bp AAAGGGTTGTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATaGTACACATTCCCAGAAAGACACATAGGTAGACACGTGGCTGTA +
Preference number: 1 (lower is better)
Translates to: KGLSLSSTTQLQAHR*YTFPERHIGRHVAV
Trigger: TACAGCCACGTGTCTACCTATGTGTCTTTCTGGGAATGTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGACAACCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
3UTR CCA 90 bp GTTTTTCCTTTGGGTTTAGGTGTAAGTGAACTATTATCATTGGAGTaGAGAACTGGAGAGAAAGGGTTGTCACTGTCCAGCACTACACAG +
Preference number: 1 (lower is better)
Translates to: VFPLGLGVSELLSLE*RTGEKGLSLSSTTQ
Trigger: CTGTGTAGTGCTGGACAGTGACAACCCTTTCTCTCCAGTTCTCCACTCCAATGATAATAGTTCACTTACACCTAAACCCAAAGGAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
3UTR TCA 90 bp ACAATTGGACCTAGAGCTGGTTTTTCCTTTGGGTTTAGGTGTAAGTaGACTATTATCATTGGAGTGGAGAACTGGAGAGAAAGGGTTGTC +
Preference number: 1 (lower is better)
Translates to: TIGPRAGFSFGFRCK*TIIIGVENWRERVV
Trigger: GACAACCCTTTCTCTCCAGTTCTCCACTCCAATGATAATAGTTCACTTACACCTAAACCCAAAGGAAAAACCAGCTCTAGGTCCAATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
3UTR-3UTR CCA 90 bp TGCACTAAGGGCTGGCCCCTCAGACAGGCTCAGGGGAGGTCCGCCCACAAGGGCCTGCCATGGGGTCCGTaGCCCTTGCTGTCACATCTG +
Preference number: 2 (lower is better)
Translates to: CTKGWPLRQAQGRSAHKGLPWGP*PLLSHL
Trigger: CAGATGTGACAGCAAGGGCCACGGACCCCATGGCAG...GCCCTTGTGGGCGGACCTCCCCTGAGCCTGTCTGAGGGGCCAGCCCTTAGTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000622181.4
3UTR-3UTR TCA 90 bp AGATGTAGCAAGGCGACCCTCGAGGTGGCAGTGGGGAGAAAGTGCGAGCTCGGGGTCATTCTGCCCGCCTaGAGCACCAGGTCTCGGCTC +
Preference number: 2 (lower is better)
Translates to: RCSKATLEVAVGRKCELGVILPA*STRSRL
Trigger: GAGCCGAGACCTGGTGCTTCAGGCGGGCAGAATGAC...CCCGAGCTCGCACTTTCTCCCCACTGCCACCTCGAGGGTCGCCTTGCTACATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519214.5
3UTR-3UTR TCA 90 bp GGCAGACGGGGTGAGTCTCAAGCCAGTGGACCAGTGAGGGGTGAGGGCACGTCCACACGGATTTCTTCCTaGACAAAGTCCCTCCCCTAC +
Preference number: 2 (lower is better)
Translates to: GRRGESQASGPVRGEGTSTRISS*TKSLPY
Trigger: GTAGGGGAGGGACTTTGTTCAGGAAGAAATCCGTGT...GGACGTGCCCTCACCCCTCACTGGTCCACTGGCTTGAGACTCACCCCGTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
3UTR-3UTR CCA 90 bp GTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACATTCCCAGAACGCCACCCCTGCCATaGGGTCCGTGGCCCTTGCTG +
Preference number: 2 (lower is better)
Translates to: VTVQHYTAAGTQMVHIPRTPPLP*GPWPLL
Trigger: CAGCAAGGGCCACGGACCCCATGGCAGGGGTGGCGT...TCTGGGAATGTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000622181.4
3UTR-3UTR GCA 90 bp CCGCCTCATGTAGGACAGGATGTCCATCTTGACGTTGCTGACCGTGGTCCGGTGACCGTGGTCCGGTGGTaGCAGCGCATGATGGGTATA +
Preference number: 2 (lower is better)
Translates to: PPHVGQDVHLDVADRGPVTVVRW*QRMMGI
Trigger: TATACCCATCATGCGCTGGCACCACCGGACCACGGT...CACCGGACCACGGTCAGCAACGTCAAGATGGACATCCTGTCCTACATGAGGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517973.1
ENST00000614343.4
3UTR-3UTR TCA 90 bp TGGAGGCAGTGGGAGATGCTGGCCCCAAGGTTGAGGTATCAGTTAGAGCAGAACGCCAGGCTGGGGCCTTaGGTGATAGGAAAGGGGTCT +
Preference number: 2 (lower is better)
Translates to: WRQWEMLAPRLRYQLEQNARLGP*VIGKGS
Trigger: AGACCCCTTTCCTATCACTCAAGGCCCCAGCCTGGC...GTTCTGCTCTAACTGATACCTCAACCTTGGGGCCAGCATCTCCCACTGCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
3UTR-3UTR TCA 90 bp CGGTCAGATGTACCCAGGAGCTCCGAGGTGGGAGGACAGGAGTTCTTTAGGAAAGGTGGTGCCAGCGCATaGTGGGTATACCATCTGGCC +
Preference number: 2 (lower is better)
Translates to: RSDVPRSSEVGGQEFFRKGGASA*WVYHLA
Trigger: GGCCAGATGGTATACCCATCATGCGCTGGCACCACC...TTTCCTAAAGAACTCCTGTCCTCCCACCTCGGAGCTCCTGGGTACATCTGACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614343.4
3UTR-3UTR CCA 90 bp TGCACTAAGGGCTGGCCCCTCAGACAGGCTCAGGGGAGGTCCGCCCACAAGGGCGTGAACTATTATCATTaGAGTGGAGAACTGGAGAGA +
Preference number: 2 (lower is better)
Translates to: CTKGWPLRQAQGRSAHKGVNYYH*SGELER
Trigger: TCTCTCCAGTTCTCCACTCCAATGATAATAGTTCAC...GCCCTTGTGGGCGGACCTCCCCTGAGCCTGTCTGAGGGGCCAGCCCTTAGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000622181.4
3UTR-3UTR CCA 90 bp GGCTCCGTACTCGTAAATGGTGCCACTTATGCCACCATGGCAGTCCATCTGTATAGGCGACCCTCGAGGTaGCAGTGGGGAGAAAGTGCG +
Preference number: 2 (lower is better)
Translates to: GSVLVNGATYATMAVHLYRRPSR*QWGESA
Trigger: CGCACTTTCTCCCCACTGCCACCTCGAGGGTCGCCT...ATACAGATGGACTGCCATGGTGGCATAAGTGGCACCATTTACGAGTACGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519214.5
3UTR-3UTR TCA 90 bp CAGTGGGAGATGCTGGCCCCAAGGTTGAGGTATCAGTTAGAGCAGAACAATTGGGCCAGGCTGGGGCCTTaGGTGATAGGAAAGGGGTCT +
Preference number: 2 (lower is better)
Translates to: QWEMLAPRLRYQLEQNNWARLGP*VIGKGS
Trigger: AGACCCCTTTCCTATCACTCAAGGCCCCAGCCTGGC...CCAATTGTTCTGCTCTAACTGATACCTCAACCTTGGGGCCAGCATCTCCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
3UTR-3UTR GCA 90 bp TGGAGGCAGTGGGAGATGCTGGCCCCAAGGTTGAGGTATCAGTTAGAGCAGAACGCACCCACACCCACATaGCTGGCAGTACACAGAACT +
Preference number: 2 (lower is better)
Translates to: WRQWEMLAPRLRYQLEQNAPTPT*LAVHRT
Trigger: AGTTCTGTGTACTGCCAGGCATGTGGGTGTGGGTGC...GTTCTGCTCTAACTGATACCTCAACCTTGGGGCCAGCATCTCCCACTGCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
3UTR-3UTR GCA 90 bp GTGGGAGATGCTGGCCCCAAGGTTGAGGTATCAGTTAGAGCAGAACAATTGGACGGGGTCCGTGGCCCTTaGTGTCACATCTGCCTTGGT +
Preference number: 2 (lower is better)
Translates to: VGDAGPKVEVSVRAEQLDGVRGP*CHICLG
Trigger: ACCAAGGCAGATGTGACAGCAAGGGCCACGGACCCC...GTCCAATTGTTCTGCTCTAACTGATACCTCAACCTTGGGGCCAGCATCTCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
3UTR-3UTR GCA 90 bp GGCTCCGTACTCGTAAATGGTGCCACTTATGCCACCATGGCAGTCCATCTGTATGCAGTGGGGAGAAAGTaGGAGCTCGGGGAGAGAGAC +
Preference number: 2 (lower is better)
Translates to: GSVLVNGATYATMAVHLYAVGRK*ELGERD
Trigger: GTCTCTCTCCCCGAGCTCGCACTTTCTCCCCACTGC...ATACAGATGGACTGCCATGGTGGCATAAGTGGCACCATTTACGAGTACGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519214.5
3UTR-3UTR CCA 90 bp GCAGTGGGAGATGCTGGCCCCAAGGTTGAGGTATCAGTTAGAGCAGAACAATTGCCCTCCCCTACATGGTaGACATGGGATGAGACGGCC +
Preference number: 2 (lower is better)
Translates to: AVGDAGPKVEVSVRAEQLPSPTW*TWDETA
Trigger: GGCCGTCTCATCCCATGTCCACCATGTAGGGGAGGG...CAATTGTTCTGCTCTAACTGATACCTCAACCTTGGGGCCAGCATCTCCCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
3UTR-3UTR CCA 90 bp AGGGTTGTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACATTCCCTCCCCTACATGGTaGACATGGGATGAGACGGCC +
Preference number: 2 (lower is better)
Translates to: RVVTVQHYTAAGTQMVHIPSPTW*TWDETA
Trigger: GGCCGTCTCATCCCATGTCCACCATGTAGGGGAGGG...AATGTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGACAACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
3UTR-3UTR CCA 90 bp CTCATGAAGACGCCACCCCTGCCATGGGGTCCGTGGCCCTTGCTGTCACATCTGATTGGAGTGGAGAACTaGAGAGAAAGGGTTGTCACT +
Preference number: 2 (lower is better)
Translates to: LMKTPPLPWGPWPLLSHLIGVEN*RERVVT
Trigger: AGTGACAACCCTTTCTCTCCAGTTCTCCACTCCAAT...CAGATGTGACAGCAAGGGCCACGGACCCCATGGCAGGGGTGGCGTCTTCATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000622181.4
3UTR-3UTR TCA 90 bp GCCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTGGGACACGGATTTCTTCCTaGACAAAGTCCCTCCCCTAC +
Preference number: 2 (lower is better)
Translates to: ALVDLREVDLSQGELWGGTRISS*TKSLPY
Trigger: GTAGGGGAGGGACTTTGTTCAGGAAGAAATCCGTGT...CCCACCCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
3UTR-3UTR CCA 90 bp CACAGAACTGTATGCATCCATTTGTGCCAGGCTGGGGCCTTGAGTGATAGGAAACCCTCCCCTACATGGTaGACATGGGATGAGACGGCC +
Preference number: 2 (lower is better)
Translates to: HRTVCIHLCQAGALSDRKPSPTW*TWDETA
Trigger: GGCCGTCTCATCCCATGTCCACCATGTAGGGGAGGG...TTTCCTATCACTCAAGGCCCCAGCCTGGCACAAATGGATGCATACAGTTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
3UTR-3UTR GCA 90 bp AAAGGGTTGTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACAGCACCCACACCCACATaGCTGGCAGTACACAGAACT +
Preference number: 2 (lower is better)
Translates to: KGLSLSSTTQLQAHRWYTAPTPT*LAVHRT
Trigger: AGTTCTGTGTACTGCCAGGCATGTGGGTGTGGGTGC...TGTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGACAACCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
3UTR-3UTR CCA 90 bp GCAGTGGGAGATGCTGGCCCCAAGGTTGAGGTATCAGTTAGAGCAGAACAATTGAGTCCCTCCCCTACATaGTGGACATGGGATGAGACG +
Preference number: 2 (lower is better)
Translates to: AVGDAGPKVEVSVRAEQLSPSPT*WTWDET
Trigger: CGTCTCATCCCATGTCCACCATGTAGGGGAGGGACT...CAATTGTTCTGCTCTAACTGATACCTCAACCTTGGGGCCAGCATCTCCCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
3UTR-3UTR CCA 90 bp GCCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTGGGCTGCAGGCACACAGATaGTACACATTCCCAGAAAGA +
Preference number: 2 (lower is better)
Translates to: ALVDLREVDLSQGELWGGLQAHR*YTFPER
Trigger: TCTTTCTGGGAATGTGTACCATCTGTGTGCCTGCAG...CCCACCCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
3UTR-3UTR CCA 90 bp TCTGCCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTCCTACATGGTGGACATaGGATGAGACGGCCTTCAGT +
Preference number: 2 (lower is better)
Translates to: SALVDLREVDLSQGELWGPTWWT*DETAFS
Trigger: ACTGAAGGCCGTCTCATCCCATGTCCACCATGTAGG...ACCCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614343.4
3UTR-3UTR TCA 90 bp TCTGCCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTATGGTGGACATGGGATaGGACGGCCTTCAGTTACTT +
Preference number: 2 (lower is better)
Translates to: SALVDLREVDLSQGELWGMVDMG*DGLQLL
Trigger: AAGTAACTGAAGGCCGTCTCATCCCATGTCCACCAT...ACCCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614343.4
3UTR-3UTR GCA 90 bp CAGTGGGAGATGCTGGCCCCAAGGTTGAGGTATCAGTTAGAGCAGAACAATTGGGTATGCATCCATTTGTaGCAGGCTGGGGCCTTGAGT +
Preference number: 2 (lower is better)
Translates to: QWEMLAPRLRYQLEQNNWVCIHL*QAGALS
Trigger: ACTCAAGGCCCCAGCCTGGCACAAATGGATGCATAC...CCAATTGTTCTGCTCTAACTGATACCTCAACCTTGGGGCCAGCATCTCCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
3UTR-3UTR CCA 90 bp CACAGAACTGTATGCATCCATTTGTGCCAGGCTGGGGCCTTGAGTGATAGGAAAAGTCCCTCCCCTACATaGTGGACATGGGATGAGACG +
Preference number: 2 (lower is better)
Translates to: HRTVCIHLCQAGALSDRKSPSPT*WTWDET
Trigger: CGTCTCATCCCATGTCCACCATGTAGGGGAGGGACT...TTTCCTATCACTCAAGGCCCCAGCCTGGCACAAATGGATGCATACAGTTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
3UTR-3UTR CCA 90 bp GTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACATTCCCAGACCACACCCACATGCCTaGCAGTACACAGAACTGTAT +
Preference number: 2 (lower is better)
Translates to: VTVQHYTAAGTQMVHIPRPHPHA*QYTELY
Trigger: ATACAGTTCTGTGTACTGCCAGGCATGTGGGTGTGG...TCTGGGAATGTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
3UTR-3UTR TCA 90 bp GCAGTGGGAGATGCTGGCCCCAAGGTTGAGGTATCAGTTAGAGCAGAACAATTGACACGGATTTCTTCCTaGACAAAGTCCCTCCCCTAC +
Preference number: 2 (lower is better)
Translates to: AVGDAGPKVEVSVRAEQLTRISS*TKSLPY
Trigger: GTAGGGGAGGGACTTTGTTCAGGAAGAAATCCGTGT...CAATTGTTCTGCTCTAACTGATACCTCAACCTTGGGGCCAGCATCTCCCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
3UTR-3UTR GCA 90 bp GTTGAGGTATCAGTTAGAGCAGAACAATTGGACCTAGAGCTGGTTTTTCCTTTGCTTGACCCCCAGGGCTaGCTGCCGCCTCATGTAGGA +
Preference number: 2 (lower is better)
Translates to: VEVSVRAEQLDLELVFPLLDPQG*LPPHVG
Trigger: TCCTACATGAGGCGGCAGGCAGCCCTGGGGGTCAAG...CAAAGGAAAAACCAGCTCTAGGTCCAATTGTTCTGCTCTAACTGATACCTCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000614343.4
3UTR-3UTR CCA 90 bp AGGGTTGTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACATTCCACACCCACATGCCTaGCAGTACACAGAACTGTAT +
Preference number: 2 (lower is better)
Translates to: RVVTVQHYTAAGTQMVHIPHPHA*QYTELY
Trigger: ATACAGTTCTGTGTACTGCCAGGCATGTGGGTGTGG...AATGTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGACAACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
3UTR-3UTR CCA 90 bp CAGCTGCAGGCACACAGATGGTACACATTCCCAGAAAGACACATAGGTAGACACCCACACCCACATGCCTaGCAGTACACAGAACTGTAT +
Preference number: 2 (lower is better)
Translates to: QLQAHRWYTFPERHIGRHPHPHA*QYTELY
Trigger: ATACAGTTCTGTGTACTGCCAGGCATGTGGGTGTGG...GTGTCTACCTATGTGTCTTTCTGGGAATGTGTACCATCTGTGTGCCTGCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
3UTR-3UTR CCA 90 bp TTCTTCCTGAACAAAGTCCCTCCCCTACATGGTGGACATGGGATGAGACGGCCTATTGGAGTGGAGAACTaGAGAGAAAGGGTTGTCACT +
Preference number: 2 (lower is better)
Translates to: FFLNKVPPLHGGHGMRRPIGVEN*RERVVT
Trigger: AGTGACAACCCTTTCTCTCCAGTTCTCCACTCCAAT...AGGCCGTCTCATCCCATGTCCACCATGTAGGGGAGGGACTTTGTTCAGGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
3UTR-3UTR CCA 90 bp GCCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTGGGATAGTTACTAATATTTaGAGGCAGTGGGAGATGCTG +
Preference number: 2 (lower is better)
Translates to: ALVDLREVDLSQGELWGGIVTNI*RQWEML
Trigger: CAGCATCTCCCACTGCCTCCAAATATTAGTAACTAT...CCCACCCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
3UTR-3UTR CCA 90 bp CAGTGGGAGATGCTGGCCCCAAGGTTGAGGTATCAGTTAGAGCAGAACAATTGGATTGGAGTGGAGAACTaGAGAGAAAGGGTTGTCACT +
Preference number: 2 (lower is better)
Translates to: QWEMLAPRLRYQLEQNNWIGVEN*RERVVT
Trigger: AGTGACAACCCTTTCTCTCCAGTTCTCCACTCCAAT...CCAATTGTTCTGCTCTAACTGATACCTCAACCTTGGGGCCAGCATCTCCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
3UTR-3UTR GCA 90 bp GTTGAGGTATCAGTTAGAGCAGAACAATTGGACCTAGAGCTGGTTTTTCCTTTGGCACCCACACCCACATaGCTGGCAGTACACAGAACT +
Preference number: 2 (lower is better)
Translates to: VEVSVRAEQLDLELVFPLAPTPT*LAVHRT
Trigger: AGTTCTGTGTACTGCCAGGCATGTGGGTGTGGGTGC...CAAAGGAAAAACCAGCTCTAGGTCCAATTGTTCTGCTCTAACTGATACCTCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
3UTR-3UTR CCA 90 bp CATCTGCCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTGAACTATTATCATTaGAGTGGAGAACTGGAGAGA +
Preference number: 2 (lower is better)
Translates to: HLPWLISGRLISLRENCGVNYYH*SGELER
Trigger: TCTCTCCAGTTCTCCACTCCAATGATAATAGTTCAC...CCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGGCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
3UTR CAA 90 bp GGAGATGCTGGCCCCAAGGTTGAGGTATCAGTTAGAGCAGAACAATaGGACCTAGAGCTGGTTTTTCCTTTGGGTTTAGGTGTAAGTGAA +
Preference number: 2 (lower is better)
Translates to: GDAGPKVEVSVRAEQ*DLELVFPLGLGVSE
Trigger: TTCACTTACACCTAAACCCAAAGGAAAAACCAGCTCTAGGTCCAATTGTTCTGCTCTAACTGATACCTCAACCTTGGGGCCAGCATCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
3UTR CAA 90 bp GAGCTGGTTTTTCCTTTGGGTTTAGGTGTAAGTGAACTATTATCATaGGAGTGGAGAACTGGAGAGAAAGGGTTGTCACTGTCCAGCACT +
Preference number: 2 (lower is better)
Translates to: ELVFPLGLGVSELLS*EWRTGEKGLSLSST
Trigger: AGTGCTGGACAGTGACAACCCTTTCTCTCCAGTTCTCCACTCCAATGATAATAGTTCACTTACACCTAAACCCAAAGGAAAAACCAGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
3UTR CAA 90 bp GTATCAGTTAGAGCAGAACAATTGGACCTAGAGCTGGTTTTTCCTTaGGGTTTAGGTGTAAGTGAACTATTATCATTGGAGTGGAGAACT +
Preference number: 2 (lower is better)
Translates to: VSVRAEQLDLELVFP*GLGVSELLSLEWRT
Trigger: AGTTCTCCACTCCAATGATAATAGTTCACTTACACCTAAACCCAAAGGAAAAACCAGCTCTAGGTCCAATTGTTCTGCTCTAACTGATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
3UTR TCA 72 bp TGGGCAGACGGGGTGAGTCTCAAGCCAGTGGACCAGTaGGGGGTGAGGGCACGTCCTCCGAAGGAGCAGGGG +
Preference number: 3 (lower is better)
Translates to: WADGVSLKPVDQ*GVRARPPKEQG
Trigger: CCCCTGCTCCTTCGGAGGACGTGCCCTCACCCCTCACTGGTCCACTGGCTTGAGACTCACCCCGTCTGCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388825.9
ENST00000622181.4
3UTR TCA 72 bp TGGGCAGACGGGGTGAGTCTCAAGCCAGTGGACCAGTaGGGGGTGAGGGCACGTCCTCCGAAGGAGCATGGG +
Preference number: 3 (lower is better)
Translates to: WADGVSLKPVDQ*GVRARPPKEHG
Trigger: CCCATGCTCCTTCGGAGGACGTGCCCTCACCCCTCACTGGTCCACTGGCTTGAGACTCACCCCGTCTGCCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614343.4
3UTR CCA 72 bp GGAGGTGACATAGATGTAGCAAGGCGACCCTCGAGGTaGCAGTGGGGAGAAAGTGCGAGCTCGGGGAGAGAG +
Preference number: 3 (lower is better)
Translates to: GGDIDVARRPSR*QWGESASSGRE
Trigger: CTCTCTCCCCGAGCTCGCACTTTCTCCCCACTGCCACCTCGAGGGTCGCCTTGCTACATCTATGTCACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519214.5
3UTR GCA 72 bp ATGTCCATCTTGACGTTGCTGACCGTGGTCCGGTGGTaGCAGCGCATGATGGGTATACCATCTGGCCCCACC +
Preference number: 3 (lower is better)
Translates to: MSILTLLTVVRW*QRMMGIPSGPT
Trigger: GGTGGGGCCAGATGGTATACCCATCATGCGCTGGCACCACCGGACCACGGTCAGCAACGTCAAGATGGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517973.1
ENST00000614343.4
3UTR-3UTR CAA 90 bp CTGCCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTGTGGGGTCCGTGGCCCTaGCTGTCACATCTGCCTTGG +
Preference number: 3 (lower is better)
Translates to: LPWLISGRLISLRENCGVWGPWP*LSHLPW
Trigger: CCAAGGCAGATGTGACAGCAAGGGCCACGGACCCCA...CACCCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
3UTR GCA 72 bp GACGGCCTTCAGTTACTTCCTCTTGACCCCCAGGGCTaGCTGCCGCCTCATGTAGGACAGGATGTCCATCTT +
Preference number: 3 (lower is better)
Translates to: DGLQLLPLDPQG*LPPHVGQDVHL
Trigger: AAGATGGACATCCTGTCCTACATGAGGCGGCAGGCAGCCCTGGGGGTCAAGAGGAAGTAACTGAAGGCCGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517973.1
ENST00000614343.4
3UTR-3UTR CAA 90 bp CCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTGGGGGACAGGATGTCCATCTaGACGTTGCTGACCGTGGTC +
Preference number: 3 (lower is better)
Translates to: PWLISGRLISLRENCGVGDRMSI*TLLTVV
Trigger: GACCACGGTCAGCAACGTCAAGATGGACATCCTGTC...CCCCACCCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614343.4
3UTR-3UTR CAA 90 bp GTGGGAGATGCTGGCCCCAAGGTTGAGGTATCAGTTAGAGCAGAACAATTGGACTGCCAGGCTGGGGCCTaGAGTGATAGGAAAGGGGTC +
Preference number: 3 (lower is better)
Translates to: VGDAGPKVEVSVRAEQLDCQAGA*SDRKGV
Trigger: GACCCCTTTCCTATCACTCAAGGCCCCAGCCTGGCA...GTCCAATTGTTCTGCTCTAACTGATACCTCAACCTTGGGGCCAGCATCTCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
3UTR-3UTR CAA 90 bp AAAGGGTTGTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACATGCCAGGCTGGGGCCTaGAGTGATAGGAAAGGGGTC +
Preference number: 3 (lower is better)
Translates to: KGLSLSSTTQLQAHRWYTCQAGA*SDRKGV
Trigger: GACCCCTTTCCTATCACTCAAGGCCCCAGCCTGGCA...TGTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGACAACCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
3UTR-3UTR CAA 90 bp CCTACATGGTGGACATGGGATGAGACGGCCTTCAGTTACTTCCTCTTGACCCCCGACAGGATGTCCATCTaGACGTTGCTGACCGTGGTC +
Preference number: 3 (lower is better)
Translates to: PTWWTWDETAFSYFLLTPDRMSI*TLLTVV
Trigger: GACCACGGTCAGCAACGTCAAGATGGACATCCTGTC...GGGGGTCAAGAGGAAGTAACTGAAGGCCGTCTCATCCCATGTCCACCATGTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517973.1
ENST00000614343.4
3UTR-3UTR CAA 90 bp GGCCTTAGCCTGAATGCACTAAGGGCTGGCCCCTCAGACAGGCTCAGGGGAGGTGTTAGAGCAGAACAATaGGACCTAGAGCTGGTTTTT +
Preference number: 3 (lower is better)
Translates to: GLSLNALRAGPSDRLRGGVRAEQ*DLELVF
Trigger: AAAAACCAGCTCTAGGTCCAATTGTTCTGCTCTAAC...ACCTCCCCTGAGCCTGTCTGAGGGGCCAGCCCTTAGTGCATTCAGGCTAAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000622181.4
3UTR GCA 72 bp TGCCTGGCAGTACACAGAACTGTATGCATCCATTTGTaGCAGGCTGGGGCCTTGAGTGATAGGAAAGGGGTC +
Preference number: 3 (lower is better)
Translates to: CLAVHRTVCIHL*QAGALSDRKGV
Trigger: GACCCCTTTCCTATCACTCAAGGCCCCAGCCTGGCACAAATGGATGCATACAGTTCTGTGTACTGCCAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
3UTR-3UTR CAA 90 bp ACACAGCTGCAGGCACACAGATGGTACACATTCCCAGAAAGACACATAGGTAGATGCCAGGCTGGGGCCTaGAGTGATAGGAAAGGGGTC +
Preference number: 3 (lower is better)
Translates to: TQLQAHRWYTFPERHIGRCQAGA*SDRKGV
Trigger: GACCCCTTTCCTATCACTCAAGGCCCCAGCCTGGCA...TCTACCTATGTGTCTTTCTGGGAATGTGTACCATCTGTGTGCCTGCAGCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
3UTR-3UTR CAA 90 bp ATTTGGAGGCAGTGGGAGATGCTGGCCCCAAGGTTGAGGTATCAGTTAGAGCAGATGCTGGCCCCAAGGTaGAGGTATCAGTTAGAGCAG +
Preference number: 3 (lower is better)
Translates to: IWRQWEMLAPRLRYQLEQMLAPR*RYQLEQ
Trigger: CTGCTCTAACTGATACCTCAACCTTGGGGCCAGCAT...CTGCTCTAACTGATACCTCAACCTTGGGGCCAGCATCTCCCACTGCCTCCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
3UTR-3UTR CAA 90 bp TCTGCCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTATGCTGGCCCCAAGGTaGAGGTATCAGTTAGAGCAG +
Preference number: 3 (lower is better)
Translates to: SALVDLREVDLSQGELWGMLAPR*RYQLEQ
Trigger: CTGCTCTAACTGATACCTCAACCTTGGGGCCAGCAT...ACCCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
3UTR CCA 72 bp CTTCCTGAACAAAGTCCCTCCCCTACATGGTGGACATaGGATGAGACGGCCTTCAGTTACTTCCTCTTGACC +
Preference number: 3 (lower is better)
Translates to: LPEQSPSPTWWT*DETAFSYFLLT
Trigger: GGTCAAGAGGAAGTAACTGAAGGCCGTCTCATCCCATGTCCACCATGTAGGGGAGGGACTTTGTTCAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614343.4
3UTR-3UTR CAA 90 bp GCCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTGGGGTTAGAGCAGAACAATaGGACCTAGAGCTGGTTTTT +
Preference number: 3 (lower is better)
Translates to: ALVDLREVDLSQGELWGGVRAEQ*DLELVF
Trigger: AAAAACCAGCTCTAGGTCCAATTGTTCTGCTCTAAC...CCCACCCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
3UTR GCA 72 bp GAGAGAAAGGGTTGTCACTGTCCAGCACTACACAGCTaGAGGCACACAGATGGTACACATTCCCAGAAAGAC +
Preference number: 3 (lower is better)
Translates to: ERKGCHCPALHS*RHTDGTHSQKD
Trigger: GTCTTTCTGGGAATGTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGACAACCCTTTCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
3UTR CCA 72 bp GGATTTCTTCCTGAACAAAGTCCCTCCCCTACATGGTaGACATGGGATGAGACGGCCTTCAGTTACTTCCTC +
Preference number: 3 (lower is better)
Translates to: GFLPEQSPSPTW*TWDETAFSYFL
Trigger: GAGGAAGTAACTGAAGGCCGTCTCATCCCATGTCCACCATGTAGGGGAGGGACTTTGTTCAGGAAGAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614343.4
3UTR CCA 72 bp CACGGATTTCTTCCTGAACAAAGTCCCTCCCCTACATaGTGGACATGGGATGAGACGGCCTTCAGTTACTTC +
Preference number: 3 (lower is better)
Translates to: HGFLPEQSPSPT*WTWDETAFSYF
Trigger: GAAGTAACTGAAGGCCGTCTCATCCCATGTCCACCATGTAGGGGAGGGACTTTGTTCAGGAAGAAATCCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614343.4
3UTR-3UTR CAA 90 bp AGCACTACACAGCTGCAGGCACACAGATGGTACACATTCCCAGAAAGACACATAATGCTGGCCCCAAGGTaGAGGTATCAGTTAGAGCAG +
Preference number: 3 (lower is better)
Translates to: STTQLQAHRWYTFPERHIMLAPR*RYQLEQ
Trigger: CTGCTCTAACTGATACCTCAACCTTGGGGCCAGCAT...TATGTGTCTTTCTGGGAATGTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
3UTR-3UTR CAA 90 bp GTTGAGGTATCAGTTAGAGCAGAACAATTGGACCTAGAGCTGGTTTTTCCTTTGCCTGGTCGGACATACTaGAGGGTAGGAAGGATCTCT +
Preference number: 3 (lower is better)
Translates to: VEVSVRAEQLDLELVFPLPGRTY*RVGRIS
Trigger: AGAGATCCTTCCTACCCTCAAGTATGTCCGACCAGG...CAAAGGAAAAACCAGCTCTAGGTCCAATTGTTCTGCTCTAACTGATACCTCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614343.4
CDS-3UTR GCA 90 bp GCACTAAGGGCTGGCCCCTCAGACAGGCTCAGGGGAGGTCCGCCCACAAGGGCTGGGGCGGGCGCGACTTaGCCTCAGCTCCCCACCTCC +
Preference number: 4 (lower is better)
Translates to: ALRAGPSDRLRGGPPTRAGAGAT*PQLPTS
Trigger: GGAGGTGGGGAGCTGAGGGCAAGTCGCGCCCGCCCC...AGCCCTTGTGGGCGGACCTCCCCTGAGCCTGTCTGAGGGGCCAGCCCTTAGTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000622181.4
CDS-3UTR TCA 90 bp GGCAGACGGGGTGAGTCTCAAGCCAGTGGACCAGTGAGGGGTGAGGGCACGTCCTGGCCACCGTCCGTCTaGGGTGTCCGGCGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GRRGESQASGPVRGEGTSWPPSV*GVRRSQ
Trigger: CTGGGAGCGCCGGACACCTCAGACGGACGGTGGCCA...GGACGTGCCCTCACCCCTCACTGGTCCACTGGCTTGAGACTCACCCCGTCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622181.4
CDS-3UTR GCA 90 bp GCACTAAGGGCTGGCCCCTCAGACAGGCTCAGGGGAGGTCCGCCCACAAGGGCTGGTCGCCTGAGCCGCTaGCTGATCCCTGGCCACCGT +
Preference number: 4 (lower is better)
Translates to: ALRAGPSDRLRGGPPTRAGRLSR*LIPGHR
Trigger: ACGGTGGCCAGGGATCAGGCAGCGGCTCAGGCGACC...AGCCCTTGTGGGCGGACCTCCCCTGAGCCTGTCTGAGGGGCCAGCCCTTAGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388825.9
ENST00000622181.4
CDS-3UTR CCA 90 bp CGGGGTGAGTCTCAAGCCAGTGGACCAGTGAGGGGTGAGGGCACGTCCTCCGAAGCAGCAGCCGGGCCATaGCGGGGTGGGGGCACACTC +
Preference number: 4 (lower is better)
Translates to: RGESQASGPVRGEGTSSEAAAGP*RGGGTL
Trigger: GAGTGTGCCCCCACCCCGCCATGGCCCGGCTGCTGC...TTCGGAGGACGTGCCCTCACCCCTCACTGGTCCACTGGCTTGAGACTCACCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp GGTTCCCAGAAGAGGCGGTCAGATGTACCCAGGAGCTCCGAGGTGGGAGGACAGCGGGCCATGGCGGGGTaGGGGCACACTCAGGGTCGC +
Preference number: 4 (lower is better)
Translates to: GSQKRRSDVPRSSEVGGQRAMAG*GHTQGR
Trigger: GCGACCCTGAGTGTGCCCCCACCCCGCCATGGCCCG...CTGTCCTCCCACCTCGGAGCTCCTGGGTACATCTGACCGCCTCTTCTGGGAACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517973.1
ENST00000614343.4
CDS-3UTR CCA 90 bp AGATGTAGCAAGGCGACCCTCGAGGTGGCAGTGGGGAGAAAGTGCGAGCTCGGGGCAGCAGCCGGGCCATaGCGGGGTGGGGGCACACTC +
Preference number: 4 (lower is better)
Translates to: RCSKATLEVAVGRKCELGAAAGP*RGGGTL
Trigger: GAGTGTGCCCCCACCCCGCCATGGCCCGGCTGCTGC...CCCGAGCTCGCACTTTCTCCCCACTGCCACCTCGAGGGTCGCCTTGCTACATCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000519214.5
CDS-3UTR CCA 90 bp AGTGGACCAGTGAGGGGTGAGGGCACGTCCTCCGAAGGAGCAGGGGTGGCATCCACGCCACCCCTGCCATaGGGTCCGTGGCCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: SGPVRGEGTSSEGAGVASTPPLP*GPWPLL
Trigger: CAGCAAGGGCCACGGACCCCATGGCAGGGGTGGCGT...GGATGCCACCCCTGCTCCTTCGGAGGACGTGCCCTCACCCCTCACTGGTCCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000622181.4
CDS-3UTR CCA 90 bp CCCCCACAGCAGTTCTTCAGGACCAGGACCACCCAGCTGCCTCTCTCCTTTCTCCGGGCCATGGCGGGGTaGGGGCACACTCAGGGTCGC +
Preference number: 4 (lower is better)
Translates to: PPQQFFRTRTTQLPLSFLRAMAG*GHTQGR
Trigger: GCGACCCTGAGTGTGCCCCCACCCCGCCATGGCCCG...GAGAAAGGAGAGAGGCAGCTGGGTGGTCCTGGTCCTGAAGAACTGCTGTGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519214.5
CDS-3UTR CCA 90 bp GGACAGGATGTCCATCTTGACGTTGCTGACCGTGGTCCGGTGGTGCCAGCGCATGCAGCAGCCGGGCCATaGCGGGGTGGGGGCACACTC +
Preference number: 4 (lower is better)
Translates to: GQDVHLDVADRGPVVPAHAAAGP*RGGGTL
Trigger: GAGTGTGCCCCCACCCCGCCATGGCCCGGCTGCTGC...ATGCGCTGGCACCACCGGACCACGGTCAGCAACGTCAAGATGGACATCCTGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517973.1
ENST00000614343.4
CDS-3UTR TCA 90 bp GGCAGACGGGGTGAGTCTCAAGCCAGTGGACCAGTGAGGGGTGAGGGCACGTCCACTGGGCAGACGGGGTaGGTCTCAAGCCAGTGGACC +
Preference number: 4 (lower is better)
Translates to: GRRGESQASGPVRGEGTSTGQTG*VSSQWT
Trigger: GGTCCACTGGCTTGAGACTCACCCCGTCTGCCCAGT...GGACGTGCCCTCACCCCTCACTGGTCCACTGGCTTGAGACTCACCCCGTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR GCA 90 bp CGGGGTGAGTCTCAAGCCAGTGGACCAGTGAGGGGTGAGGGCACGTCCTCCGAATCTTGTCCCCGGCTCTaGGAGACGAAGCCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RGESQASGPVRGEGTSSESCPRL*ETKPAR
Trigger: CCTGGCCGGCTTCGTCTCGCAGAGCCGGGGACAAGA...TTCGGAGGACGTGCCCTCACCCCTCACTGGTCCACTGGCTTGAGACTCACCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR GCA 90 bp CGACCCTCGAGGTGGCAGTGGGGAGAAAGTGCGAGCTCGGGGAGAGAGACCTTCCTCGCACCTGGGGATTaGCCATCTGGCGGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: RPSRWQWGESASSGRETFLAPGD*PSGGEP
Trigger: AGGCTCCCCGCCAGATGGGCAATCCCCAGGTGCGAG...GAAGGTCTCTCTCCCCGAGCTCGCACTTTCTCCCCACTGCCACCTCGAGGGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000519214.5
CDS-3UTR CCA 90 bp GCACTAAGGGCTGGCCCCTCAGACAGGCTCAGGGGAGGTCCGCCCACAAGGGCTCCCTCCCCTACATGGTaGACATGGGATGAGACGGCC +
Preference number: 4 (lower is better)
Translates to: ALRAGPSDRLRGGPPTRAPSPTW*TWDETA
Trigger: GGCCGTCTCATCCCATGTCCACCATGTAGGGGAGGG...AGCCCTTGTGGGCGGACCTCCCCTGAGCCTGTCTGAGGGGCCAGCCCTTAGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000622181.4
CDS-3UTR TCA 90 bp GGCAGACGGGGTGAGTCTCAAGCCAGTGGACCAGTGAGGGGTGAGGGCACGTCCGGTGGTGCCAGCGCATaGTGGGTATACCATCTGGCC +
Preference number: 4 (lower is better)
Translates to: GRRGESQASGPVRGEGTSGGASA*WVYHLA
Trigger: GGCCAGATGGTATACCCATCATGCGCTGGCACCACC...GGACGTGCCCTCACCCCTCACTGGTCCACTGGCTTGAGACTCACCCCGTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR GCA 90 bp CCGCCTCATGTAGGACAGGATGTCCATCTTGACGTTGCTGACCGTGGTCCGGTGAGCAGGCAGGACGCCTaGAGCAGCCGGGCCATGGCG +
Preference number: 4 (lower is better)
Translates to: PPHVGQDVHLDVADRGPVSRQDA*SSRAMA
Trigger: CGCCATGGCCCGGCTGCTGCAGGCGTCCTGCCTGCT...CACCGGACCACGGTCAGCAACGTCAAGATGGACATCCTGTCCTACATGAGGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517973.1
ENST00000614343.4
CDS-3UTR GCA 90 bp TGGGTTCCCAGAAGAGGCGGTCAGATGTACCCAGGAGCTCCGAGGTGGGAGGACTCTTGTCCCCGGCTCTaGGAGACGAAGCCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: WVPRRGGQMYPGAPRWEDSCPRL*ETKPAR
Trigger: CCTGGCCGGCTTCGTCTCGCAGAGCCGGGGACAAGA...GTCCTCCCACCTCGGAGCTCCTGGGTACATCTGACCGCCTCTTCTGGGAACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517973.1
ENST00000614343.4
CDS-3UTR GCA 90 bp CGGGGTGAGTCTCAAGCCAGTGGACCAGTGAGGGGTGAGGGCACGTCCTCCGAACTTGACCCCCAGGGCTaGCTGCCGCCTCATGTAGGA +
Preference number: 4 (lower is better)
Translates to: RGESQASGPVRGEGTSSELDPQG*LPPHVG
Trigger: TCCTACATGAGGCGGCAGGCAGCCCTGGGGGTCAAG...TTCGGAGGACGTGCCCTCACCCCTCACTGGTCCACTGGCTTGAGACTCACCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp GCACTAAGGGCTGGCCCCTCAGACAGGCTCAGGGGAGGTCCGCCCACAAGGGCTCCAGGAGCTCCGAGGTaGGAGGACAGGAGTTTTGAG +
Preference number: 4 (lower is better)
Translates to: ALRAGPSDRLRGGPPTRAPGAPR*EDRSFE
Trigger: CTCAAAACTCCTGTCCTCCCACCTCGGAGCTCCTGG...AGCCCTTGTGGGCGGACCTCCCCTGAGCCTGTCTGAGGGGCCAGCCCTTAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521632.1
CDS-3UTR TCA 90 bp GGCCTTAGCCTGAATGCACTAAGGGCTGGCCCCTCAGACAGGCTCAGGGGAGGTACTGGGCAGACGGGGTaGGTCTCAAGCCAGTGGACC +
Preference number: 4 (lower is better)
Translates to: GLSLNALRAGPSDRLRGGTGQTG*VSSQWT
Trigger: GGTCCACTGGCTTGAGACTCACCCCGTCTGCCCAGT...ACCTCCCCTGAGCCTGTCTGAGGGGCCAGCCCTTAGTGCATTCAGGCTAAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388825.9
ENST00000622181.4
CDS-3UTR CCA 90 bp TGGAGGCAGTGGGAGATGCTGGCCCCAAGGTTGAGGTATCAGTTAGAGCAGAACCGGGCCATGGCGGGGTaGGGGCACACTCAGGGTCGC +
Preference number: 4 (lower is better)
Translates to: WRQWEMLAPRLRYQLEQNRAMAG*GHTQGR
Trigger: GCGACCCTGAGTGTGCCCCCACCCCGCCATGGCCCG...GTTCTGCTCTAACTGATACCTCAACCTTGGGGCCAGCATCTCCCACTGCCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp CTGAATGCACTAAGGGCTGGCCCCTCAGACAGGCTCAGGGGAGGTCCGCCCACACTGCCATGGGGTCCGTaGCCCTTGCTGTCACATCTG +
Preference number: 4 (lower is better)
Translates to: LNALRAGPSDRLRGGPPTLPWGP*PLLSHL
Trigger: CAGATGTGACAGCAAGGGCCACGGACCCCATGGCAG...TGTGGGCGGACCTCCCCTGAGCCTGTCTGAGGGGCCAGCCCTTAGTGCATTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000622181.4
CDS-3UTR CCA 90 bp AGATGTAGCAAGGCGACCCTCGAGGTGGCAGTGGGGAGAAAGTGCGAGCTCGGGGAGGTCTCTCGCACCTaGGGATTGCCCATCTGGCGG +
Preference number: 4 (lower is better)
Translates to: RCSKATLEVAVGRKCELGEVSRT*GLPIWR
Trigger: CCGCCAGATGGGCAATCCCCAGGTGCGAGAGACCTC...CCCGAGCTCGCACTTTCTCCCCACTGCCACCTCGAGGGTCGCCTTGCTACATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519214.5
CDS-3UTR CCA 90 bp TCGAGGTGGCAGTGGGGAGAAAGTGCGAGCTCGGGGAGAGAGACCTTCCTCCCTCCCTCGAGGTGGCAGTaGGGAGAAAGTGCGAGCTCG +
Preference number: 4 (lower is better)
Translates to: SRWQWGESASSGRETFLPPSRWQ*GESASS
Trigger: CGAGCTCGCACTTTCTCCCCACTGCCACCTCGAGGG...AGGGAGGAAGGTCTCTCTCCCCGAGCTCGCACTTTCTCCCCACTGCCACCTCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519214.5
CDS-3UTR TCA 90 bp CCCAGAAGAGGCGGTCAGATGTACCCAGGAGCTCCGAGGTGGGAGGACAGGAGTGGTGGTGCCAGCGCATaGTGGGTATACCATCTGGCC +
Preference number: 4 (lower is better)
Translates to: PRRGGQMYPGAPRWEDRSGGASA*WVYHLA
Trigger: GGCCAGATGGTATACCCATCATGCGCTGGCACCACC...ACTCCTGTCCTCCCACCTCGGAGCTCCTGGGTACATCTGACCGCCTCTTCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517973.1
ENST00000614343.4
CDS-3UTR TCA 90 bp TGGGTTCCCAGAAGAGGCGGTCAGATGTACCCAGGAGCTCCGAGGTGGGAGGACGGTGGTGCCAGCGCATaGTGGGTATACCATCTGGCC +
Preference number: 4 (lower is better)
Translates to: WVPRRGGQMYPGAPRWEDGGASA*WVYHLA
Trigger: GGCCAGATGGTATACCCATCATGCGCTGGCACCACC...GTCCTCCCACCTCGGAGCTCCTGGGTACATCTGACCGCCTCTTCTGGGAACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517973.1
ENST00000614343.4
CDS-3UTR TCA 90 bp GGGTTCCCAGAAGAGGCGGTCAGATGTACCCAGGAGCTCCGAGGTGGGAGGACAGCCAGGCTGGGGCCTTaGGTGATAGGAAAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: GFPEEAVRCTQELRGGRTARLGP*VIGKGS
Trigger: AGACCCCTTTCCTATCACTCAAGGCCCCAGCCTGGC...TGTCCTCCCACCTCGGAGCTCCTGGGTACATCTGACCGCCTCTTCTGGGAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614343.4
CDS-3UTR TCA 90 bp CCGCCTCATGTAGGACAGGATGTCCATCTTGACGTTGCTGACCGTGGTCCGGTGTGGACCAGTGAGGGGTaGGGGCACGTCCTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: PPHVGQDVHLDVADRGPVWTSEG*GHVLRR
Trigger: CCTTCGGAGGACGTGCCCTCACCCCTCACTGGTCCA...CACCGGACCACGGTCAGCAACGTCAAGATGGACATCCTGTCCTACATGAGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614343.4
CDS-3UTR GCA 90 bp ACATGCCTGGCAGTACACAGAACTGTATGCATCCATTTGTGCCAGGCTGGGGCCAGCAGGCAGGACGCCTaGAGCAGCCGGGCCATGGCG +
Preference number: 4 (lower is better)
Translates to: TCLAVHRTVCIHLCQAGASRQDA*SSRAMA
Trigger: CGCCATGGCCCGGCTGCTGCAGGCGTCCTGCCTGCT...GGCCCCAGCCTGGCACAAATGGATGCATACAGTTCTGTGTACTGCCAGGCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR GCA 90 bp CAGAAGAGGCGGTCAGATGTACCCAGGAGCTCCGAGGTGGGAGGACAGGAGTTCCTTGACCCCCAGGGCTaGCTGCCGCCTCATGTAGGA +
Preference number: 4 (lower is better)
Translates to: QKRRSDVPRSSEVGGQEFLDPQG*LPPHVG
Trigger: TCCTACATGAGGCGGCAGGCAGCCCTGGGGGTCAAG...GAACTCCTGTCCTCCCACCTCGGAGCTCCTGGGTACATCTGACCGCCTCTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517973.1
ENST00000614343.4
CDS-3UTR CCA 90 bp GTTGTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACATTCCCCGGGCCATGGCGGGGTaGGGGCACACTCAGGGTCGC +
Preference number: 4 (lower is better)
Translates to: VVTVQHYTAAGTQMVHIPRAMAG*GHTQGR
Trigger: GCGACCCTGAGTGTGCCCCCACCCCGCCATGGCCCG...GGGAATGTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGACAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp ATTTGGAGGCAGTGGGAGATGCTGGCCCCAAGGTTGAGGTATCAGTTAGAGCAGCGGGCCATGGCGGGGTaGGGGCACACTCAGGGTCGC +
Preference number: 4 (lower is better)
Translates to: IWRQWEMLAPRLRYQLEQRAMAG*GHTQGR
Trigger: GCGACCCTGAGTGTGCCCCCACCCCGCCATGGCCCG...CTGCTCTAACTGATACCTCAACCTTGGGGCCAGCATCTCCCACTGCCTCCAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp GAAAGGGTTGTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACGCAGCAGCCGGGCCATaGCGGGGTGGGGGCACACTC +
Preference number: 4 (lower is better)
Translates to: ERVVTVQHYTAAGTQMVHAAAGP*RGGGTL
Trigger: GAGTGTGCCCCCACCCCGCCATGGCCCGGCTGCTGC...GTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGACAACCCTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp CTCAGGCACGGAGGTGACATAGATGTAGCAAGGCGACCCTCGAGGTGGCAGTGGAGGCGACCCTCGAGGTaGCAGTGGGGAGAAAGTGCG +
Preference number: 4 (lower is better)
Translates to: LRHGGDIDVARRPSRWQWRRPSR*QWGESA
Trigger: CGCACTTTCTCCCCACTGCCACCTCGAGGGTCGCCT...CCACTGCCACCTCGAGGGTCGCCTTGCTACATCTATGTCACCTCCGTGCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519214.5
CDS-3UTR CCA 90 bp TGGGATGAGACGGCCTTCAGTTACTTCCTCTTGACCCCCAGGGCTGCCTGCCGCGGAGCATGGGGTCCGTaGCCCTTGCTGTCACATCTG +
Preference number: 4 (lower is better)
Translates to: WDETAFSYFLLTPRAACRGAWGP*PLLSHL
Trigger: CAGATGTGACAGCAAGGGCCACGGACCCCATGCTCC...GCGGCAGGCAGCCCTGGGGGTCAAGAGGAAGTAACTGAAGGCCGTCTCATCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614343.4
3UTR CAA 72 bp GGCACGTCCTCCGAAGGAGCATGGGGTCCGTGGCCCTaGCTGTCACATCTGCCTTGGTTGATCTCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GTSSEGAWGPWP*LSHLPWLISGR
Trigger: CCTCCCTGAGATCAACCAAGGCAGATGTGACAGCAAGGGCCACGGACCCCATGCTCCTTCGGAGGACGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614343.4
CDS-3UTR TCA 90 bp CCGCCTCATGTAGGACAGGATGTCCATCTTGACGTTGCTGACCGTGGTCCGGTGAAGCCAGTGGACCAGTaGGGGGTGAGGGCACGTCCT +
Preference number: 4 (lower is better)
Translates to: PPHVGQDVHLDVADRGPVKPVDQ*GVRARP
Trigger: AGGACGTGCCCTCACCCCTCACTGGTCCACTGGCTT...CACCGGACCACGGTCAGCAACGTCAAGATGGACATCCTGTCCTACATGAGGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614343.4
CDS-3UTR TCA 90 bp CCCAGAAGAGGCGGTCAGATGTACCCAGGAGCTCCGAGGTGGGAGGACAGGAGTAGTGTCAACCTTGCTTaGGGCCCCCTGACCCTCTTC +
Preference number: 4 (lower is better)
Translates to: PRRGGQMYPGAPRWEDRSSVNLA*GPLTLF
Trigger: GAAGAGGGTCAGGGGGCCTCAAGCAAGGTTGACACT...ACTCCTGTCCTCCCACCTCGGAGCTCCTGGGTACATCTGACCGCCTCTTCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520059.1
CDS-3UTR GCA 90 bp GTGAACCTTCATGGGTTCCCAGAAGAGGCGGTCAGATGTACCCAGGAGCTCCGATCTTGTCCCCGGCTCTaGGAGACGAAGCCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VNLHGFPEEAVRCTQELRSCPRL*ETKPAR
Trigger: CCTGGCCGGCTTCGTCTCGCAGAGCCGGGGACAAGA...TCGGAGCTCCTGGGTACATCTGACCGCCTCTTCTGGGAACCCATGAAGGTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517973.1
ENST00000614343.4
CDS-3UTR GCA 90 bp CCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTGGGGTCTTGTCCCCGGCTCTaGGAGACGAAGCCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PWLISGRLISLRENCGVGSCPRL*ETKPAR
Trigger: CCTGGCCGGCTTCGTCTCGCAGAGCCGGGGACAAGA...CCCCACCCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR GCA 90 bp AGATGTAGCAAGGCGACCCTCGAGGTGGCAGTGGGGAGAAAGTGCGAGCTCGGGCCAGGACCACCCAGCTaGCTCTCTCCTTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: RCSKATLEVAVGRKCELGPGPPS*LSPFSL
Trigger: CAAGGAGAAAGGAGAGAGGCAGCTGGGTGGTCCTGG...CCCGAGCTCGCACTTTCTCCCCACTGCCACCTCGAGGGTCGCCTTGCTACATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519214.5
CDS-3UTR GCA 90 bp GGTTCCCAGAAGAGGCGGTCAGATGTACCCAGGAGCTCCGAGGTGGGAGGACAGGAGGAGTGTCAACCTTaGTTGAGGCCCCCTGACCCT +
Preference number: 4 (lower is better)
Translates to: GSQKRRSDVPRSSEVGGQEECQP*LRPPDP
Trigger: AGGGTCAGGGGGCCTCAAGCAAGGTTGACACTCCTC...CTGTCCTCCCACCTCGGAGCTCCTGGGTACATCTGACCGCCTCTTCTGGGAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520059.1
CDS-3UTR CCA 90 bp GACACGGATTTCTTCCTGAACAAAGTCCCTCCCCTACATGGTGGACATGGGATGGCAGCAGCCGGGCCATaGCGGGGTGGGGGCACACTC +
Preference number: 4 (lower is better)
Translates to: DTDFFLNKVPPLHGGHGMAAAGP*RGGGTL
Trigger: GAGTGTGCCCCCACCCCGCCATGGCCCGGCTGCTGC...CATCCCATGTCCACCATGTAGGGGAGGGACTTTGTTCAGGAAGAAATCCGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp GGCAGACGGGGTGAGTCTCAAGCCAGTGGACCAGTGAGGGGTGAGGGCACGTCCGACAAAGCCTCCACCTaGTCGGACATACTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: GRRGESQASGPVRGEGTSDKAST*SDILEG
Trigger: ACCCTCAAGTATGTCCGACCAGGTGGAGGCTTTGTC...GGACGTGCCCTCACCCCTCACTGGTCCACTGGCTTGAGACTCACCCCGTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp AGTGGACCAGTGAGGGGTGAGGGCACGTCCTCCGAAGGAGCAGGGGTGGCATCCCCTACATGGTGGACATaGGATGAGACGGCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: SGPVRGEGTSSEGAGVASPTWWT*DETAFS
Trigger: ACTGAAGGCCGTCTCATCCCATGTCCACCATGTAGG...GGATGCCACCCCTGCTCCTTCGGAGGACGTGCCCTCACCCCTCACTGGTCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000622181.4
CDS-3UTR TCA 90 bp AGATGTAGCAAGGCGACCCTCGAGGTGGCAGTGGGGAGAAAGTGCGAGCTCGGGCCTCCCCATCAATGGTaGGGGCTCCGTACTCGTAAA +
Preference number: 4 (lower is better)
Translates to: RCSKATLEVAVGRKCELGPPHQW*GLRTRK
Trigger: TTTACGAGTACGGAGCCCTCACCATTGATGGGGAGG...CCCGAGCTCGCACTTTCTCCCCACTGCCACCTCGAGGGTCGCCTTGCTACATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519214.5
CDS-3UTR TCA 90 bp CCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTGGGGAAGCCAGTGGACCAGTaGGGGGTGAGGGCACGTCCT +
Preference number: 4 (lower is better)
Translates to: PWLISGRLISLRENCGVGKPVDQ*GVRARP
Trigger: AGGACGTGCCCTCACCCCTCACTGGTCCACTGGCTT...CCCCACCCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR GCA 90 bp TCTGCCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTGGTCGCCTGAGCCGCTaGCTGATCCCTGGCCACCGT +
Preference number: 4 (lower is better)
Translates to: SALVDLREVDLSQGELWGGRLSR*LIPGHR
Trigger: ACGGTGGCCAGGGATCAGGCAGCGGCTCAGGCGACC...ACCCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR GCA 90 bp GGCAGACGGGGTGAGTCTCAAGCCAGTGGACCAGTGAGGGGTGAGGGCACGTCCCGTACTCGTAAATGGTaGCACTTATGCCACCATGGC +
Preference number: 4 (lower is better)
Translates to: GRRGESQASGPVRGEGTSRTRKW*HLCHHG
Trigger: GCCATGGTGGCATAAGTGGCACCATTTACGAGTACG...GGACGTGCCCTCACCCCTCACTGGTCCACTGGCTTGAGACTCACCCCGTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR GCA 90 bp CCAGAAGAGGCGGTCAGATGTACCCAGGAGCTCCGAGGTGGGAGGACAGGAGTTACCGTGGTCCGGTGGTaGCAGCGCATGATGGGTATA +
Preference number: 4 (lower is better)
Translates to: PEEAVRCTQELRGGRTGVTVVRW*QRMMGI
Trigger: TATACCCATCATGCGCTGGCACCACCGGACCACGGT...AACTCCTGTCCTCCCACCTCGGAGCTCCTGGGTACATCTGACCGCCTCTTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517973.1
ENST00000614343.4
CDS-3UTR GCA 90 bp ACTGAAGGGGAGCAGCTCAGGCACGGAGGTGACATAGATGTAGCAAGGCGACCCGCAGTGGGGAGAAAGTaGGAGCTCGGGGAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: TEGEQLRHGGDIDVARRPAVGRK*ELGERD
Trigger: GTCTCTCTCCCCGAGCTCGCACTTTCTCCCCACTGC...GGGTCGCCTTGCTACATCTATGTCACCTCCGTGCCTGAGCTGCTCCCCTTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519214.5
CDS-3UTR GCA 90 bp CCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTGGGGCCAAGCCGAGACCCTTaGAGCCAATCGCTAGGCGGC +
Preference number: 4 (lower is better)
Translates to: PWLISGRLISLRENCGVGPSRDP*SQSLGG
Trigger: GCCGCCTAGCGATTGGCTGCAAGGGTCTCGGCTTGG...CCCCACCCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622181.4
CDS-3UTR CCA 90 bp GGCAGACGGGGTGAGTCTCAAGCCAGTGGACCAGTGAGGGGTGAGGGCACGTCCCCACACCCACATGCCTaGCAGTACACAGAACTGTAT +
Preference number: 4 (lower is better)
Translates to: GRRGESQASGPVRGEGTSPHPHA*QYTELY
Trigger: ATACAGTTCTGTGTACTGCCAGGCATGTGGGTGTGG...GGACGTGCCCTCACCCCTCACTGGTCCACTGGCTTGAGACTCACCCCGTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp ACTGAAGGGGAGCAGCTCAGGCACGGAGGTGACATAGATGTAGCAAGGCGACCCTGGGGATTGCCCATCTaGCGGGGAGCCTTCGACTTC +
Preference number: 4 (lower is better)
Translates to: TEGEQLRHGGDIDVARRPWGLPI*RGAFDF
Trigger: GAAGTCGAAGGCTCCCCGCCAGATGGGCAATCCCCA...GGGTCGCCTTGCTACATCTATGTCACCTCCGTGCCTGAGCTGCTCCCCTTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519214.5
CDS-3UTR TCA 90 bp TCGAGGTGGCAGTGGGGAGAAAGTGCGAGCTCGGGGAGAGAGACCTTCCTCCCTAGGGAAAGCCCAGAATaGCCAGACCGAATGGTGCAA +
Preference number: 4 (lower is better)
Translates to: SRWQWGESASSGRETFLPRESPE*PDRMVQ
Trigger: TTGCACCATTCGGTCTGGTCATTCTGGGCTTTCCCT...AGGGAGGAAGGTCTCTCTCCCCGAGCTCGCACTTTCTCCCCACTGCCACCTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519214.5
CDS-3UTR TCA 90 bp CCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTGGGGGCCAGGCTGGGGCCTTaGGTGATAGGAAAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: PWLISGRLISLRENCGVGARLGP*VIGKGS
Trigger: AGACCCCTTTCCTATCACTCAAGGCCCCAGCCTGGC...CCCCACCCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR TCA 90 bp CATCTGCCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGTGGACCAGTGAGGGGTaGGGGCACGTCCTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: HLPWLISGRLISLRENCGWTSEG*GHVLRR
Trigger: CCTTCGGAGGACGTGCCCTCACCCCTCACTGGTCCA...CCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGGCAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR TCA 90 bp GTTGTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACATTCCCTGGACCAGTGAGGGGTaGGGGCACGTCCTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: VVTVQHYTAAGTQMVHIPWTSEG*GHVLRR
Trigger: CCTTCGGAGGACGTGCCCTCACCCCTCACTGGTCCA...GGGAATGTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGACAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR TCA 90 bp ACATGCCTGGCAGTACACAGAACTGTATGCATCCATTTGTGCCAGGCTGGGGCCAAGCCAGTGGACCAGTaGGGGGTGAGGGCACGTCCT +
Preference number: 4 (lower is better)
Translates to: TCLAVHRTVCIHLCQAGAKPVDQ*GVRARP
Trigger: AGGACGTGCCCTCACCCCTCACTGGTCCACTGGCTT...GGCCCCAGCCTGGCACAAATGGATGCATACAGTTCTGTGTACTGCCAGGCATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR GCA 90 bp GACACGGATTTCTTCCTGAACAAAGTCCCTCCCCTACATGGTGGACATGGGATGGGTCGCCTGAGCCGCTaGCTGATCCCTGGCCACCGT +
Preference number: 4 (lower is better)
Translates to: DTDFFLNKVPPLHGGHGMGRLSR*LIPGHR
Trigger: ACGGTGGCCAGGGATCAGGCAGCGGCTCAGGCGACC...CATCCCATGTCCACCATGTAGGGGAGGGACTTTGTTCAGGAAGAAATCCGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp GGCAGACGGGGTGAGTCTCAAGCCAGTGGACCAGTGAGGGGTGAGGGCACGTCCCTCCGTACTCGTAAATaGTGCCACTTATGCCACCAT +
Preference number: 4 (lower is better)
Translates to: GRRGESQASGPVRGEGTSLRTRK*CHLCHH
Trigger: ATGGTGGCATAAGTGGCACCATTTACGAGTACGGAG...GGACGTGCCCTCACCCCTCACTGGTCCACTGGCTTGAGACTCACCCCGTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp TGGGATGAGACGGCCTTCAGTTACTTCCTCTTGACCCCCAGGGCTGCCTGCCGCGACAAAGCCTCCACCTaGTCGGACATACTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: WDETAFSYFLLTPRAACRDKAST*SDILEG
Trigger: ACCCTCAAGTATGTCCGACCAGGTGGAGGCTTTGTC...GCGGCAGGCAGCCCTGGGGGTCAAGAGGAAGTAACTGAAGGCCGTCTCATCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517973.1
ENST00000614343.4
CDS-3UTR CCA 90 bp CCTACATGGTGGACATGGGATGAGACGGCCTTCAGTTACTTCCTCTTGACCCCCCTGACCGTGGTCCGGTaGTGCCAGCGCATGATGGGT +
Preference number: 4 (lower is better)
Translates to: PTWWTWDETAFSYFLLTPLTVVR*CQRMMG
Trigger: ACCCATCATGCGCTGGCACCACCGGACCACGGTCAG...GGGGGTCAAGAGGAAGTAACTGAAGGCCGTCTCATCCCATGTCCACCATGTAGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000517973.1
ENST00000614343.4
CDS-3UTR CCA 90 bp CCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTGGGGCCCTCCCCTACATGGTaGACATGGGATGAGACGGCC +
Preference number: 4 (lower is better)
Translates to: PWLISGRLISLRENCGVGPSPTW*TWDETA
Trigger: GGCCGTCTCATCCCATGTCCACCATGTAGGGGAGGG...CCCCACCCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp AAAGGGTTGTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACAACGCCACCCCTGCCATaGGGTCCGTGGCCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: KGLSLSSTTQLQAHRWYTTPPLP*GPWPLL
Trigger: CAGCAAGGGCCACGGACCCCATGGCAGGGGTGGCGT...TGTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGACAACCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000622181.4
CDS-3UTR CCA 90 bp TGGGTTCCCAGAAGAGGCGGTCAGATGTACCCAGGAGCTCCGAGGTGGGAGGACCAGAAAGGCTTTTACTaGGCAGACGGGGTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: WVPRRGGQMYPGAPRWEDQKGFY*ADGVSL
Trigger: GAGACTCACCCCGTCTGCCCAGTAAAAGCCTTTCTG...GTCCTCCCACCTCGGAGCTCCTGGGTACATCTGACCGCCTCTTCTGGGAACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614343.4
CDS-3UTR CCA 90 bp CGGGGAGAGAGACCTTCCTCCCTTAGTCATTCTGCCCGCCTGAAGCACCAGGTCCGGCTCTCCAACAGATaGAACTACGAGACGACGACG +
Preference number: 4 (lower is better)
Translates to: RGERPSSLSHSARLKHQVRLSNR*NYETTT
Trigger: CGTCGTCGTCTCGTAGTTCCATCTGTTGGAGAGCCG...GACCTGGTGCTTCAGGCGGGCAGAATGACTAAGGGAGGAAGGTCTCTCTCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519214.5
CDS-3UTR CCA 90 bp CGTGAACCTTCATGGGTTCCCAGAAGAGGCGGTCAGATGTACCCAGGAGCTCCGCTTCCCAGGCCTTCCTaGGGAATAGCCTGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: REPSWVPRRGGQMYPGAPLPRPS*GIAWPF
Trigger: AAAGGGCCAGGCTATTCCCCAGGAAGGCCTGGGAAG...CGGAGCTCCTGGGTACATCTGACCGCCTCTTCTGGGAACCCATGAAGGTTCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520059.1
CDS-3UTR CCA 90 bp TGGAGGCAGTGGGAGATGCTGGCCCCAAGGTTGAGGTATCAGTTAGAGCAGAACTCCTCCGAAGGAGCATaGGGTCCGTGGCCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: WRQWEMLAPRLRYQLEQNSSEGA*GPWPLL
Trigger: CAGCAAGGGCCACGGACCCCATGCTCCTTCGGAGGA...GTTCTGCTCTAACTGATACCTCAACCTTGGGGCCAGCATCTCCCACTGCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614343.4
CDS-3UTR TCA 90 bp CAGAAGAGGCGGTCAGATGTACCCAGGAGCTCCGAGGTGGGAGGACAGGAGTTCAGGGAAAGCCCAGAATaGCCAGACCGAATGGTGCAA +
Preference number: 4 (lower is better)
Translates to: QKRRSDVPRSSEVGGQEFRESPE*PDRMVQ
Trigger: TTGCACCATTCGGTCTGGTCATTCTGGGCTTTCCCT...GAACTCCTGTCCTCCCACCTCGGAGCTCCTGGGTACATCTGACCGCCTCTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517973.1
ENST00000614343.4
CDS-3UTR TCA 90 bp CTCATGAAGACGCCACCCCTGCCATGGGGTCCGTGGCCCTTGCTGTCACATCTGACACGGATTTCTTCCTaGACAAAGTCCCTCCCCTAC +
Preference number: 4 (lower is better)
Translates to: LMKTPPLPWGPWPLLSHLTRISS*TKSLPY
Trigger: GTAGGGGAGGGACTTTGTTCAGGAAGAAATCCGTGT...CAGATGTGACAGCAAGGGCCACGGACCCCATGGCAGGGGTGGCGTCTTCATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000622181.4
CDS-3UTR TCA 90 bp AAAGGGTTGTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACATGGGCCCCTCCCTCATaGAGACGCCACCCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: KGLSLSSTTQLQAHRWYTWAPPS*RRHPCH
Trigger: ATGGCAGGGGTGGCGTCTTCATGAGGGAGGGGCCCA...TGTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGACAACCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000622181.4
CDS-3UTR TCA 90 bp CAGTGGGAGATGCTGGCCCCAAGGTTGAGGTATCAGTTAGAGCAGAACAATTGGTGGACCAGTGAGGGGTaGGGGCACGTCCTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: QWEMLAPRLRYQLEQNNWWTSEG*GHVLRR
Trigger: CCTTCGGAGGACGTGCCCTCACCCCTCACTGGTCCA...CCAATTGTTCTGCTCTAACTGATACCTCAACCTTGGGGCCAGCATCTCCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR TCA 90 bp GTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACATTCCCAGAAAGCCAGTGGACCAGTaGGGGGTGAGGGCACGTCCT +
Preference number: 4 (lower is better)
Translates to: VTVQHYTAAGTQMVHIPRKPVDQ*GVRARP
Trigger: AGGACGTGCCCTCACCCCTCACTGGTCCACTGGCTT...TCTGGGAATGTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR TCA 90 bp CATCTGCCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGACTGGGCAGACGGGGTaGGTCTCAAGCCAGTGGACC +
Preference number: 4 (lower is better)
Translates to: HLPWLISGRLISLRENCGTGQTG*VSSQWT
Trigger: GGTCCACTGGCTTGAGACTCACCCCGTCTGCCCAGT...CCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGGCAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR GCA 90 bp GGCTCCGTACTCGTAAATGGTGCCACTTATGCCACCATGGCAGTCCATCTGTATTCTTGTCCCCGGCTCTaGGAGACGAAGCCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GSVLVNGATYATMAVHLYSCPRL*ETKPAR
Trigger: CCTGGCCGGCTTCGTCTCGCAGAGCCGGGGACAAGA...ATACAGATGGACTGCCATGGTGGCATAAGTGGCACCATTTACGAGTACGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519214.5
CDS-3UTR GCA 90 bp CATCTGCCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGCTTGACCCCCAGGGCTaGCTGCCGCCTCATGTAGGA +
Preference number: 4 (lower is better)
Translates to: HLPWLISGRLISLRENCGLDPQG*LPPHVG
Trigger: TCCTACATGAGGCGGCAGGCAGCCCTGGGGGTCAAG...CCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGGCAGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp CGGGGTGAGTCTCAAGCCAGTGGACCAGTGAGGGGTGAGGGCACGTCCTCCGAACTCCGTACTCGTAAATaGTGCCACTTATGCCACCAT +
Preference number: 4 (lower is better)
Translates to: RGESQASGPVRGEGTSSELRTRK*CHLCHH
Trigger: ATGGTGGCATAAGTGGCACCATTTACGAGTACGGAG...TTCGGAGGACGTGCCCTCACCCCTCACTGGTCCACTGGCTTGAGACTCACCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp TTCTTCCTGAACAAAGTCCCTCCCCTACATGGTGGACATGGGATGAGACGGCCTCTGACCGTGGTCCGGTaGTGCCAGCGCATGATGGGT +
Preference number: 4 (lower is better)
Translates to: FFLNKVPPLHGGHGMRRPLTVVR*CQRMMG
Trigger: ACCCATCATGCGCTGGCACCACCGGACCACGGTCAG...AGGCCGTCTCATCCCATGTCCACCATGTAGGGGAGGGACTTTGTTCAGGAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp GGACAGGATGTCCATCTTGACGTTGCTGACCGTGGTCCGGTGGTGCCAGCGCATCCTACATGGTGGACATaGGATGAGACGGCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: GQDVHLDVADRGPVVPAHPTWWT*DETAFS
Trigger: ACTGAAGGCCGTCTCATCCCATGTCCACCATGTAGG...ATGCGCTGGCACCACCGGACCACGGTCAGCAACGTCAAGATGGACATCCTGTCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517973.1
ENST00000614343.4
CDS-3UTR CCA 90 bp CCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTGGGGGAATGCACTAAGGGCTaGCCCCTCAGACAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PWLISGRLISLRENCGVGECTKG*PLRQAQ
Trigger: CTGAGCCTGTCTGAGGGGCCAGCCCTTAGTGCATTC...CCCCACCCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000622181.4
CDS-3UTR CCA 90 bp GCCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTGGGGAATGCACTAAGGGCTaGCCCCTCAGACAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: ALVDLREVDLSQGELWGGECTKG*PLRQAQ
Trigger: CTGAGCCTGTCTGAGGGGCCAGCCCTTAGTGCATTC...CCCACCCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000622181.4
CDS-3UTR CCA 90 bp TTGTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACATTCCCACAATCGCTAGGCGGCTaGGATTTCAGGGGCGGGCGC +
Preference number: 4 (lower is better)
Translates to: LSLSSTTQLQAHRWYTFPQSLGG*DFRGGR
Trigger: GCGCCCGCCCCTGAAATCCCAGCCGCCTAGCGATTG...TGGGAATGTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622181.4
CDS-3UTR TCA 90 bp CTCAGGCACGGAGGTGACATAGATGTAGCAAGGCGACCCTCGAGGTGGCAGTGGAGTAGCTGGCCACGTTaGCAAAGAGGACGTATTTGC +
Preference number: 4 (lower is better)
Translates to: LRHGGDIDVARRPSRWQWSSWPR*QRGRIC
Trigger: GCAAATACGTCCTCTTTGTCAACGTGGCCAGCTACT...CCACTGCCACCTCGAGGGTCGCCTTGCTACATCTATGTCACCTCCGTGCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519214.5
CDS-3UTR TCA 90 bp GAAAGGGTTGTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACGGTGGTGCCAGCGCATaGTGGGTATACCATCTGGCC +
Preference number: 4 (lower is better)
Translates to: ERVVTVQHYTAAGTQMVHGGASA*WVYHLA
Trigger: GGCCAGATGGTATACCCATCATGCGCTGGCACCACC...GTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGACAACCCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR TCA 90 bp CATCTGCCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGGTGGTGCCAGCGCATaGTGGGTATACCATCTGGCC +
Preference number: 4 (lower is better)
Translates to: HLPWLISGRLISLRENCGGGASA*WVYHLA
Trigger: GGCCAGATGGTATACCCATCATGCGCTGGCACCACC...CCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGGCAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR TCA 90 bp CACAGAACTGTATGCATCCATTTGTGCCAGGCTGGGGCCTTGAGTGATAGGAAATGGGCCCCTCCCTCATaGAGACGCCACCCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: HRTVCIHLCQAGALSDRKWAPPS*RRHPCH
Trigger: ATGGCAGGGGTGGCGTCTTCATGAGGGAGGGGCCCA...TTTCCTATCACTCAAGGCCCCAGCCTGGCACAAATGGATGCATACAGTTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000622181.4
CDS-3UTR GCA 90 bp TCGAGGTGGCAGTGGGGAGAAAGTGCGAGCTCGGGGAGAGAGACCTTCCTCCCTAAATGGTGCCACTTATaGCACCATGGCAGTCCATCT +
Preference number: 4 (lower is better)
Translates to: SRWQWGESASSGRETFLPKWCHL*HHGSPS
Trigger: AGATGGACTGCCATGGTGGCATAAGTGGCACCATTT...AGGGAGGAAGGTCTCTCTCCCCGAGCTCGCACTTTCTCCCCACTGCCACCTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519214.5
CDS-3UTR GCA 90 bp CCCCCACAGCAGTTCTTCAGGACCAGGACCACCCAGCTGCCTCTCTCCTTTCTCCGTACTCGTAAATGGTaGCACTTATGCCACCATGGC +
Preference number: 4 (lower is better)
Translates to: PPQQFFRTRTTQLPLSFLRTRKW*HLCHHG
Trigger: GCCATGGTGGCATAAGTGGCACCATTTACGAGTACG...GAGAAAGGAGAGAGGCAGCTGGGTGGTCCTGGTCCTGAAGAACTGCTGTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519214.5
CDS-3UTR GCA 90 bp CTGCCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTGACCGTGGTCCGGTGGTaGCAGCGCATGATGGGTATA +
Preference number: 4 (lower is better)
Translates to: LPWLISGRLISLRENCGVTVVRW*QRMMGI
Trigger: TATACCCATCATGCGCTGGCACCACCGGACCACGGT...CACCCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR GCA 90 bp GTACACAGAACTGTATGCATCCATTTGTGCCAGGCTGGGGCCTTGAGTGATAGGCTTGACCCCCAGGGCTaGCTGCCGCCTCATGTAGGA +
Preference number: 4 (lower is better)
Translates to: VHRTVCIHLCQAGALSDRLDPQG*LPPHVG
Trigger: TCCTACATGAGGCGGCAGGCAGCCCTGGGGGTCAAG...CCTATCACTCAAGGCCCCAGCCTGGCACAAATGGATGCATACAGTTCTGTGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR GCA 90 bp TCTGCCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTGGGGTCCGTGGCCCTTaGTGTCACATCTGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: SALVDLREVDLSQGELWGGVRGP*CHICLG
Trigger: ACCAAGGCAGATGTGACAGCAAGGGCCACGGACCCC...ACCCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp AGATGTAGCAAGGCGACCCTCGAGGTGGCAGTGGGGAGAAAGTGCGAGCTCGGGCTCCGTACTCGTAAATaGTGCCACTTATGCCACCAT +
Preference number: 4 (lower is better)
Translates to: RCSKATLEVAVGRKCELGLRTRK*CHLCHH
Trigger: ATGGTGGCATAAGTGGCACCATTTACGAGTACGGAG...CCCGAGCTCGCACTTTCTCCCCACTGCCACCTCGAGGGTCGCCTTGCTACATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519214.5
CDS-3UTR CCA 90 bp AGGGTTGTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACATTCTGACCGTGGTCCGGTaGTGCCAGCGCATGATGGGT +
Preference number: 4 (lower is better)
Translates to: RVVTVQHYTAAGTQMVHILTVVR*CQRMMG
Trigger: ACCCATCATGCGCTGGCACCACCGGACCACGGTCAG...AATGTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGACAACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp CGGGGTGAGTCTCAAGCCAGTGGACCAGTGAGGGGTGAGGGCACGTCCTCCGAAATTGGAGTGGAGAACTaGAGAGAAAGGGTTGTCACT +
Preference number: 4 (lower is better)
Translates to: RGESQASGPVRGEGTSSEIGVEN*RERVVT
Trigger: AGTGACAACCCTTTCTCTCCAGTTCTCCACTCCAAT...TTCGGAGGACGTGCCCTCACCCCTCACTGGTCCACTGGCTTGAGACTCACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp TCTGCCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTCTGCCATGGGGTCCGTaGCCCTTGCTGTCACATCTG +
Preference number: 4 (lower is better)
Translates to: SALVDLREVDLSQGELWGLPWGP*PLLSHL
Trigger: CAGATGTGACAGCAAGGGCCACGGACCCCATGGCAG...ACCCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000622181.4
CDS-3UTR CCA 90 bp AAGGCGACCCTCGAGGTGGCAGTGGGGAGAAAGTGCGAGCTCGGGGAGAGAGACCCACTTATGCCACCATaGCAGTCCATCTGTATCATT +
Preference number: 4 (lower is better)
Translates to: KATLEVAVGRKCELGERDPLMPP*QSICII
Trigger: AATGATACAGATGGACTGCCATGGTGGCATAAGTGG...GTCTCTCTCCCCGAGCTCGCACTTTCTCCCCACTGCCACCTCGAGGGTCGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519214.5
CDS-3UTR TCA 90 bp GTGAACCTTCATGGGTTCCCAGAAGAGGCGGTCAGATGTACCCAGGAGCTCCGAAGGGAAAGCCCAGAATaGCCAGACCGAATGGTGCAA +
Preference number: 4 (lower is better)
Translates to: VNLHGFPEEAVRCTQELRRESPE*PDRMVQ
Trigger: TTGCACCATTCGGTCTGGTCATTCTGGGCTTTCCCT...TCGGAGCTCCTGGGTACATCTGACCGCCTCTTCTGGGAACCCATGAAGGTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517973.1
ENST00000614343.4
CDS-3UTR TCA 90 bp AGTGGACCAGTGAGGGGTGAGGGCACGTCCTCCGAAGGAGCAGGGGTGGCATCCGGGTTTAGGTGTAAGTaGACTATTATCATTGGAGTG +
Preference number: 4 (lower is better)
Translates to: SGPVRGEGTSSEGAGVASGFRCK*TIIIGV
Trigger: CACTCCAATGATAATAGTTCACTTACACCTAAACCC...GGATGCCACCCCTGCTCCTTCGGAGGACGTGCCCTCACCCCTCACTGGTCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000622181.4
CDS-3UTR TCA 90 bp GCACACAGATGGTACACATTCCCAGAAAGACACATAGGTAGACACGTGGCTGTATGGGCCCCTCCCTCATaGAGACGCCACCCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: AHRWYTFPERHIGRHVAVWAPPS*RRHPCH
Trigger: ATGGCAGGGGTGGCGTCTTCATGAGGGAGGGGCCCA...TACAGCCACGTGTCTACCTATGTGTCTTTCTGGGAATGTGTACCATCTGTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000622181.4
CDS-3UTR TCA 90 bp CTCCGTACTCGTAAATGGTGCCACTTATGCCACCATGGCAGTCCATCTGTATCAGTCATTCTGCCCGCCTaGAGCACCAGGTCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: LRTRKWCHLCHHGSPSVSVILPA*STRSRL
Trigger: GAGCCGAGACCTGGTGCTTCAGGCGGGCAGAATGAC...TGATACAGATGGACTGCCATGGTGGCATAAGTGGCACCATTTACGAGTACGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519214.5
CDS-3UTR TCA 90 bp GCACACAGATGGTACACATTCCCAGAAAGACACATAGGTAGACACGTGGCTGTATCAAGCCCTCGGGTGTaGCCAATCCGCGGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: AHRWYTFPERHIGRHVAVSSPRV*PIRGQA
Trigger: GGCTTGGCCGCGGATTGGTCACACCCGAGGGCTTGA...TACAGCCACGTGTCTACCTATGTGTCTTTCTGGGAATGTGTACCATCTGTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622181.4
CDS-3UTR GCA 90 bp CTCATGAAGACGCCACCCCTGCCATGGGGTCCGTGGCCCTTGCTGTCACATCTGTATTTGCCAGCATACTaGTTGAAGGGGATGTACTCC +
Preference number: 4 (lower is better)
Translates to: LMKTPPLPWGPWPLLSHLYLPAY*LKGMYS
Trigger: GGAGTACATCCCCTTCAAGCAGTATGCTGGCAAATA...CAGATGTGACAGCAAGGGCCACGGACCCCATGGCAGGGGTGGCGTCTTCATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000622181.4
CDS-3UTR GCA 90 bp GTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACATTCCCAGAACCGTGGTCCGGTGGTaGCAGCGCATGATGGGTATA +
Preference number: 4 (lower is better)
Translates to: VTVQHYTAAGTQMVHIPRTVVRW*QRMMGI
Trigger: TATACCCATCATGCGCTGGCACCACCGGACCACGGT...TCTGGGAATGTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR GCA 90 bp GCTGGCCCCAAGGTTGAGGTATCAGTTAGAGCAGAACAATTGGACCTAGAGCTGGGGGTCCGTGGCCCTTaGTGTCACATCTGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: AGPKVEVSVRAEQLDLELGVRGP*CHICLG
Trigger: ACCAAGGCAGATGTGACAGCAAGGGCCACGGACCCC...CAGCTCTAGGTCCAATTGTTCTGCTCTAACTGATACCTCAACCTTGGGGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp GTGAACCTTCATGGGTTCCCAGAAGAGGCGGTCAGATGTACCCAGGAGCTCCGAGACAAAGCCTCCACCTaGTCGGACATACTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: VNLHGFPEEAVRCTQELRDKAST*SDILEG
Trigger: ACCCTCAAGTATGTCCGACCAGGTGGAGGCTTTGTC...TCGGAGCTCCTGGGTACATCTGACCGCCTCTTCTGGGAACCCATGAAGGTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517973.1
ENST00000520059.1
ENST00000614343.4
CDS-3UTR CCA 90 bp CAGCTGCAGGCACACAGATGGTACACATTCCCAGAAAGACACATAGGTAGACACCTGACCGTGGTCCGGTaGTGCCAGCGCATGATGGGT +
Preference number: 4 (lower is better)
Translates to: QLQAHRWYTFPERHIGRHLTVVR*CQRMMG
Trigger: ACCCATCATGCGCTGGCACCACCGGACCACGGTCAG...GTGTCTACCTATGTGTCTTTCTGGGAATGTGTACCATCTGTGTGCCTGCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp CATGTAGGACAGGATGTCCATCTTGACGTTGCTGACCGTGGTCCGGTGGTGCCACCTACATGGTGGACATaGGATGAGACGGCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: HVGQDVHLDVADRGPVVPPTWWT*DETAFS
Trigger: ACTGAAGGCCGTCTCATCCCATGTCCACCATGTAGG...TGGCACCACCGGACCACGGTCAGCAACGTCAAGATGGACATCCTGTCCTACATG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517973.1
ENST00000614343.4
CDS-3UTR CCA 90 bp CCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTGGGGCAGAAAGGCTTTTACTaGGCAGACGGGGTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: PWLISGRLISLRENCGVGQKGFY*ADGVSL
Trigger: GAGACTCACCCCGTCTGCCCAGTAAAAGCCTTTCTG...CCCCACCCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR TCA 90 bp GAAAGGGTTGTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACCCTCCCCATCAATGGTaGGGGCTCCGTACTCGTAAA +
Preference number: 4 (lower is better)
Translates to: ERVVTVQHYTAAGTQMVHPPHQW*GLRTRK
Trigger: TTTACGAGTACGGAGCCCTCACCATTGATGGGGAGG...GTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGACAACCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR TCA 90 bp CATGTAGGACAGGATGTCCATCTTGACGTTGCTGACCGTGGTCCGGTGGTGCCAATGGTGGACATGGGATaGGACGGCCTTCAGTTACTT +
Preference number: 4 (lower is better)
Translates to: HVGQDVHLDVADRGPVVPMVDMG*DGLQLL
Trigger: AAGTAACTGAAGGCCGTCTCATCCCATGTCCACCAT...TGGCACCACCGGACCACGGTCAGCAACGTCAAGATGGACATCCTGTCCTACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517973.1
ENST00000614343.4
CDS-3UTR TCA 90 bp CCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTGGGGATGGTGGACATGGGATaGGACGGCCTTCAGTTACTT +
Preference number: 4 (lower is better)
Translates to: PWLISGRLISLRENCGVGMVDMG*DGLQLL
Trigger: AAGTAACTGAAGGCCGTCTCATCCCATGTCCACCAT...CCCCACCCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR GCA 90 bp CGGGGAGAGAGACCTTCCTCCCTTAGTCATTCTGCCCGCCTGAAGCACCAGGTCTATTTGCCAGCATACTaGTTGAAGGGGATGTACTCC +
Preference number: 4 (lower is better)
Translates to: RGERPSSLSHSARLKHQVYLPAY*LKGMYS
Trigger: GGAGTACATCCCCTTCAAGCAGTATGCTGGCAAATA...GACCTGGTGCTTCAGGCGGGCAGAATGACTAAGGGAGGAAGGTCTCTCTCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519214.5
CDS-3UTR GCA 90 bp GTACACAGAACTGTATGCATCCATTTGTGCCAGGCTGGGGCCTTGAGTGATAGGACCGTGGTCCGGTGGTaGCAGCGCATGATGGGTATA +
Preference number: 4 (lower is better)
Translates to: VHRTVCIHLCQAGALSDRTVVRW*QRMMGI
Trigger: TATACCCATCATGCGCTGGCACCACCGGACCACGGT...CCTATCACTCAAGGCCCCAGCCTGGCACAAATGGATGCATACAGTTCTGTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR GCA 90 bp CTGCCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTGGTATGCATCCATTTGTaGCAGGCTGGGGCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: LPWLISGRLISLRENCGVVCIHL*QAGALS
Trigger: ACTCAAGGCCCCAGCCTGGCACAAATGGATGCATAC...CACCCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR GCA 90 bp CAGCTGCAGGCACACAGATGGTACACATTCCCAGAAAGACACATAGGTAGACACGGGGTCCGTGGCCCTTaGTGTCACATCTGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: QLQAHRWYTFPERHIGRHGVRGP*CHICLG
Trigger: ACCAAGGCAGATGTGACAGCAAGGGCCACGGACCCC...GTGTCTACCTATGTGTCTTTCTGGGAATGTGTACCATCTGTGTGCCTGCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp ACATGCACCCACACCCACATGCCTGGCAGTACACAGAACTGTATGCATCCATTTCCCTCCCCTACATGGTaGACATGGGATGAGACGGCC +
Preference number: 4 (lower is better)
Translates to: TCTHTHMPGSTQNCMHPFPSPTW*TWDETA
Trigger: GGCCGTCTCATCCCATGTCCACCATGTAGGGGAGGG...AAATGGATGCATACAGTTCTGTGTACTGCCAGGCATGTGGGTGTGGGTGCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp CACCCACACCCACATGCCTGGCAGTACACAGAACTGTATGCATCCATTTGTGCCAGTCCCTCCCCTACATaGTGGACATGGGATGAGACG +
Preference number: 4 (lower is better)
Translates to: HPHPHAWQYTELYASICASPSPT*WTWDET
Trigger: CGTCTCATCCCATGTCCACCATGTAGGGGAGGGACT...GGCACAAATGGATGCATACAGTTCTGTGTACTGCCAGGCATGTGGGTGTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp TCTGCCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTAGTCCCTCCCCTACATaGTGGACATGGGATGAGACG +
Preference number: 4 (lower is better)
Translates to: SALVDLREVDLSQGELWGSPSPT*WTWDET
Trigger: CGTCTCATCCCATGTCCACCATGTAGGGGAGGGACT...ACCCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp GTGAACCTTCATGGGTTCCCAGAAGAGGCGGTCAGATGTACCCAGGAGCTCCGACCACACCCACATGCCTaGCAGTACACAGAACTGTAT +
Preference number: 4 (lower is better)
Translates to: VNLHGFPEEAVRCTQELRPHPHA*QYTELY
Trigger: ATACAGTTCTGTGTACTGCCAGGCATGTGGGTGTGG...TCGGAGCTCCTGGGTACATCTGACCGCCTCTTCTGGGAACCCATGAAGGTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614343.4
CDS-3UTR CCA 90 bp CGGGGTGAGTCTCAAGCCAGTGGACCAGTGAGGGGTGAGGGCACGTCCTCCGAAGTGAACTATTATCATTaGAGTGGAGAACTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: RGESQASGPVRGEGTSSEVNYYH*SGELER
Trigger: TCTCTCCAGTTCTCCACTCCAATGATAATAGTTCAC...TTCGGAGGACGTGCCCTCACCCCTCACTGGTCCACTGGCTTGAGACTCACCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp CGGGGTGAGTCTCAAGCCAGTGGACCAGTGAGGGGTGAGGGCACGTCCTCCGAAATAGTTACTAATATTTaGAGGCAGTGGGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: RGESQASGPVRGEGTSSEIVTNI*RQWEML
Trigger: CAGCATCTCCCACTGCCTCCAAATATTAGTAACTAT...TTCGGAGGACGTGCCCTCACCCCTCACTGGTCCACTGGCTTGAGACTCACCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp AAAGGGTTGTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACAGAATGCACTAAGGGCTaGCCCCTCAGACAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: KGLSLSSTTQLQAHRWYTECTKG*PLRQAQ
Trigger: CTGAGCCTGTCTGAGGGGCCAGCCCTTAGTGCATTC...TGTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGACAACCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000622181.4
CDS-3UTR TCA 90 bp CAGTGGGAGATGCTGGCCCCAAGGTTGAGGTATCAGTTAGAGCAGAACAATTGGCCTCCCCATCAATGGTaGGGGCTCCGTACTCGTAAA +
Preference number: 4 (lower is better)
Translates to: QWEMLAPRLRYQLEQNNWPPHQW*GLRTRK
Trigger: TTTACGAGTACGGAGCCCTCACCATTGATGGGGAGG...CCAATTGTTCTGCTCTAACTGATACCTCAACCTTGGGGCCAGCATCTCCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR TCA 90 bp CCTACATGGTGGACATGGGATGAGACGGCCTTCAGTTACTTCCTCTTGACCCCCAGTAGCTGGCCACGTTaGCAAAGAGGACGTATTTGC +
Preference number: 4 (lower is better)
Translates to: PTWWTWDETAFSYFLLTPSSWPR*QRGRIC
Trigger: GCAAATACGTCCTCTTTGTCAACGTGGCCAGCTACT...GGGGGTCAAGAGGAAGTAACTGAAGGCCGTCTCATCCCATGTCCACCATGTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614343.4
CDS-3UTR TCA 90 bp CATCTGCCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGAGGGAAAGCCCAGAATaGCCAGACCGAATGGTGCAA +
Preference number: 4 (lower is better)
Translates to: HLPWLISGRLISLRENCGRESPE*PDRMVQ
Trigger: TTGCACCATTCGGTCTGGTCATTCTGGGCTTTCCCT...CCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGGCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR TCA 90 bp GTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACATTCCCAGAAGGGAAAGCCCAGAATaGCCAGACCGAATGGTGCAA +
Preference number: 4 (lower is better)
Translates to: VTVQHYTAAGTQMVHIPRRESPE*PDRMVQ
Trigger: TTGCACCATTCGGTCTGGTCATTCTGGGCTTTCCCT...TCTGGGAATGTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR TCA 90 bp TTCCTGAACAAAGTCCCTCCCCTACATGGTGGACATGGGATGAGACGGCCTTCAAGGGAAAGCCCAGAATaGCCAGACCGAATGGTGCAA +
Preference number: 4 (lower is better)
Translates to: FLNKVPPLHGGHGMRRPSRESPE*PDRMVQ
Trigger: TTGCACCATTCGGTCTGGTCATTCTGGGCTTTCCCT...TGAAGGCCGTCTCATCCCATGTCCACCATGTAGGGGAGGGACTTTGTTCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR TCA 90 bp CGGTCAGATGTACCCAGGAGCTCCGAGGTGGGAGGACAGGAGTTCTTTAGGAAAACACGGATTTCTTCCTaGACAAAGTCCCTCCCCTAC +
Preference number: 4 (lower is better)
Translates to: RSDVPRSSEVGGQEFFRKTRISS*TKSLPY
Trigger: GTAGGGGAGGGACTTTGTTCAGGAAGAAATCCGTGT...TTTCCTAAAGAACTCCTGTCCTCCCACCTCGGAGCTCCTGGGTACATCTGACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614343.4
CDS-3UTR TCA 90 bp AGCACTACACAGCTGCAGGCACACAGATGGTACACATTCCCAGAAAGACACATAGCCAGGCTGGGGCCTTaGGTGATAGGAAAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: STTQLQAHRWYTFPERHIARLGP*VIGKGS
Trigger: AGACCCCTTTCCTATCACTCAAGGCCCCAGCCTGGC...TATGTGTCTTTCTGGGAATGTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR TCA 90 bp ACACAGCTGCAGGCACACAGATGGTACACATTCCCAGAAAGACACATAGGTAGAGCCAGGCTGGGGCCTTaGGTGATAGGAAAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: TQLQAHRWYTFPERHIGRARLGP*VIGKGS
Trigger: AGACCCCTTTCCTATCACTCAAGGCCCCAGCCTGGC...TCTACCTATGTGTCTTTCTGGGAATGTGTACCATCTGTGTGCCTGCAGCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR TCA 90 bp CTCCGTACTCGTAAATGGTGCCACTTATGCCACCATGGCAGTCCATCTGTATCAGCTCAGGCACGGAGGTaGCATAGATGTAGCAAGGCG +
Preference number: 4 (lower is better)
Translates to: LRTRKWCHLCHHGSPSVSAQARR*HRCSKA
Trigger: CGCCTTGCTACATCTATGTCACCTCCGTGCCTGAGC...TGATACAGATGGACTGCCATGGTGGCATAAGTGGCACCATTTACGAGTACGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519214.5
CDS-3UTR GCA 90 bp ACATGCCTGGCAGTACACAGAACTGTATGCATCCATTTGTGCCAGGCTGGGGCCCGTACTCGTAAATGGTaGCACTTATGCCACCATGGC +
Preference number: 4 (lower is better)
Translates to: TCLAVHRTVCIHLCQAGARTRKW*HLCHHG
Trigger: GCCATGGTGGCATAAGTGGCACCATTTACGAGTACG...GGCCCCAGCCTGGCACAAATGGATGCATACAGTTCTGTGTACTGCCAGGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR GCA 90 bp CAGTGGGAGATGCTGGCCCCAAGGTTGAGGTATCAGTTAGAGCAGAACAATTGGGCACCCACACCCACATaGCTGGCAGTACACAGAACT +
Preference number: 4 (lower is better)
Translates to: QWEMLAPRLRYQLEQNNWAPTPT*LAVHRT
Trigger: AGTTCTGTGTACTGCCAGGCATGTGGGTGTGGGTGC...CCAATTGTTCTGCTCTAACTGATACCTCAACCTTGGGGCCAGCATCTCCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp CTGCCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTGCCACACCCACATGCCTaGCAGTACACAGAACTGTAT +
Preference number: 4 (lower is better)
Translates to: LPWLISGRLISLRENCGVPHPHA*QYTELY
Trigger: ATACAGTTCTGTGTACTGCCAGGCATGTGGGTGTGG...CACCCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp TCTGCCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTCAGAAAGGCTTTTACTaGGCAGACGGGGTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: SALVDLREVDLSQGELWGQKGFY*ADGVSL
Trigger: GAGACTCACCCCGTCTGCCCAGTAAAAGCCTTTCTG...ACCCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR TCA 90 bp CACACCCACATGCCTGGCAGTACACAGAACTGTATGCATCCATTTGTGCCAGGCATGGTGGACATGGGATaGGACGGCCTTCAGTTACTT +
Preference number: 4 (lower is better)
Translates to: HTHMPGSTQNCMHPFVPGMVDMG*DGLQLL
Trigger: AAGTAACTGAAGGCCGTCTCATCCCATGTCCACCAT...GCCTGGCACAAATGGATGCATACAGTTCTGTGTACTGCCAGGCATGTGGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR TCA 90 bp GAAAGGGTTGTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACATGGTGGACATGGGATaGGACGGCCTTCAGTTACTT +
Preference number: 4 (lower is better)
Translates to: ERVVTVQHYTAAGTQMVHMVDMG*DGLQLL
Trigger: AAGTAACTGAAGGCCGTCTCATCCCATGTCCACCAT...GTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGACAACCCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR TCA 90 bp GTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACATTCCCAGAACACGGATTTCTTCCTaGACAAAGTCCCTCCCCTAC +
Preference number: 4 (lower is better)
Translates to: VTVQHYTAAGTQMVHIPRTRISS*TKSLPY
Trigger: GTAGGGGAGGGACTTTGTTCAGGAAGAAATCCGTGT...TCTGGGAATGTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR TCA 90 bp AGAAAGGGTTGTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACGTAGCTGGCCACGTTaGCAAAGAGGACGTATTTGC +
Preference number: 4 (lower is better)
Translates to: RKGCHCPALHSCRHTDGTRSWPR*QRGRIC
Trigger: GCAAATACGTCCTCTTTGTCAACGTGGCCAGCTACG...TGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGACAACCCTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622181.4
CDS-3UTR GCA 90 bp GCACACAGATGGTACACATTCCCAGAAAGACACATAGGTAGACACGTGGCTGTAACCGTGGTCCGGTGGTaGCAGCGCATGATGGGTATA +
Preference number: 4 (lower is better)
Translates to: AHRWYTFPERHIGRHVAVTVVRW*QRMMGI
Trigger: TATACCCATCATGCGCTGGCACCACCGGACCACGGT...TACAGCCACGTGTCTACCTATGTGTCTTTCTGGGAATGTGTACCATCTGTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR GCA 90 bp GCCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTGGGGTACACAGAACTGTATaGATCCATTTGTGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: ALVDLREVDLSQGELWGGVHRTV*IHLCQA
Trigger: AGCCTGGCACAAATGGATGCATACAGTTCTGTGTAC...CCCACCCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR GCA 90 bp CACAGAACTGTATGCATCCATTTGTGCCAGGCTGGGGCCTTGAGTGATAGGAAAGCACCCACACCCACATaGCTGGCAGTACACAGAACT +
Preference number: 4 (lower is better)
Translates to: HRTVCIHLCQAGALSDRKAPTPT*LAVHRT
Trigger: AGTTCTGTGTACTGCCAGGCATGTGGGTGTGGGTGC...TTTCCTATCACTCAAGGCCCCAGCCTGGCACAAATGGATGCATACAGTTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR GCA 90 bp ACATGCACCCACACCCACATGCCTGGCAGTACACAGAACTGTATGCATCCATTTGCACCCACACCCACATaGCTGGCAGTACACAGAACT +
Preference number: 4 (lower is better)
Translates to: TCTHTHMPGSTQNCMHPFAPTPT*LAVHRT
Trigger: AGTTCTGTGTACTGCCAGGCATGTGGGTGTGGGTGC...AAATGGATGCATACAGTTCTGTGTACTGCCAGGCATGTGGGTGTGGGTGCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR GCA 90 bp TGGGTAGATAGTGTGGTTGGAGACACGGATTTCTTCCTGAACAAAGTCCCTCCCGCACCCACACCCACATaGCTGGCAGTACACAGAACT +
Preference number: 4 (lower is better)
Translates to: WVDSVVGDTDFFLNKVPPAPTPT*LAVHRT
Trigger: AGTTCTGTGTACTGCCAGGCATGTGGGTGTGGGTGC...GGGAGGGACTTTGTTCAGGAAGAAATCCGTGTCTCCAACCACACTATCTACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp CTGCCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTGCTGCAGGCACACAGATaGTACACATTCCCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: LPWLISGRLISLRENCGVLQAHR*YTFPER
Trigger: TCTTTCTGGGAATGTGTACCATCTGTGTGCCTGCAG...CACCCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp GTATCAGTTAGAGCAGAACAATTGGACCTAGAGCTGGTTTTTCCTTTGGGTTTAACGCCACCCCTGCCATaGGGTCCGTGGCCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: VSVRAEQLDLELVFPLGLTPPLP*GPWPLL
Trigger: CAGCAAGGGCCACGGACCCCATGGCAGGGGTGGCGT...TAAACCCAAAGGAAAAACCAGCTCTAGGTCCAATTGTTCTGCTCTAACTGATAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000622181.4
CDS-3UTR TCA 90 bp GCACACAGATGGTACACATTCCCAGAAAGACACATAGGTAGACACGTGGCTGTACCTCCCCATCAATGGTaGGGGCTCCGTACTCGTAAA +
Preference number: 4 (lower is better)
Translates to: AHRWYTFPERHIGRHVAVPPHQW*GLRTRK
Trigger: TTTACGAGTACGGAGCCCTCACCATTGATGGGGAGG...TACAGCCACGTGTCTACCTATGTGTCTTTCTGGGAATGTGTACCATCTGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR TCA 90 bp ACACAGCTGCAGGCACACAGATGGTACACATTCCCAGAAAGACACATAGGTAGACCTCCCCATCAATGGTaGGGGCTCCGTACTCGTAAA +
Preference number: 4 (lower is better)
Translates to: TQLQAHRWYTFPERHIGRPPHQW*GLRTRK
Trigger: TTTACGAGTACGGAGCCCTCACCATTGATGGGGAGG...TCTACCTATGTGTCTTTCTGGGAATGTGTACCATCTGTGTGCCTGCAGCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR TCA 90 bp AGAAAGGGTTGTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACAACACGGATTTCTTCCTaGACAAAGTCCCTCCCCTAC +
Preference number: 4 (lower is better)
Translates to: RKGCHCPALHSCRHTDGTTRISS*TKSLPY
Trigger: GTAGGGGAGGGACTTTGTTCAGGAAGAAATCCGTGT...TGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGACAACCCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR GCA 90 bp GTACACAGAACTGTATGCATCCATTTGTGCCAGGCTGGGGCCTTGAGTGATAGGCGTACTCGTAAATGGTaGCACTTATGCCACCATGGC +
Preference number: 4 (lower is better)
Translates to: VHRTVCIHLCQAGALSDRRTRKW*HLCHHG
Trigger: GCCATGGTGGCATAAGTGGCACCATTTACGAGTACG...CCTATCACTCAAGGCCCCAGCCTGGCACAAATGGATGCATACAGTTCTGTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR GCA 90 bp TGGGTAGATAGTGTGGTTGGAGACACGGATTTCTTCCTGAACAAAGTCCCTCCCGTATGCATCCATTTGTaGCAGGCTGGGGCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: WVDSVVGDTDFFLNKVPPVCIHL*QAGALS
Trigger: ACTCAAGGCCCCAGCCTGGCACAAATGGATGCATAC...GGGAGGGACTTTGTTCAGGAAGAAATCCGTGTCTCCAACCACACTATCTACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp GTTGAGGTATCAGTTAGAGCAGAACAATTGGACCTAGAGCTGGTTTTTCCTTTGCTGACCGTGGTCCGGTaGTGCCAGCGCATGATGGGT +
Preference number: 4 (lower is better)
Translates to: VEVSVRAEQLDLELVFPLLTVVR*CQRMMG
Trigger: ACCCATCATGCGCTGGCACCACCGGACCACGGTCAG...CAAAGGAAAAACCAGCTCTAGGTCCAATTGTTCTGCTCTAACTGATACCTCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp CAGCTGCAGGCACACAGATGGTACACATTCCCAGAAAGACACATAGGTAGACACCCTACATGGTGGACATaGGATGAGACGGCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: QLQAHRWYTFPERHIGRHPTWWT*DETAFS
Trigger: ACTGAAGGCCGTCTCATCCCATGTCCACCATGTAGG...GTGTCTACCTATGTGTCTTTCTGGGAATGTGTACCATCTGTGTGCCTGCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp TGGGTAGATAGTGTGGTTGGAGACACGGATTTCTTCCTGAACAAAGTCCCTCCCCCTACATGGTGGACATaGGATGAGACGGCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: WVDSVVGDTDFFLNKVPPPTWWT*DETAFS
Trigger: ACTGAAGGCCGTCTCATCCCATGTCCACCATGTAGG...GGGAGGGACTTTGTTCAGGAAGAAATCCGTGTCTCCAACCACACTATCTACCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp GTTGTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACATTCCCCTGCAGGCACACAGATaGTACACATTCCCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: VVTVQHYTAAGTQMVHIPLQAHR*YTFPER
Trigger: TCTTTCTGGGAATGTGTACCATCTGTGTGCCTGCAG...GGGAATGTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp CACCCACACCCACATGCCTGGCAGTACACAGAACTGTATGCATCCATTTGTGCCCTGCAGGCACACAGATaGTACACATTCCCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: HPHPHAWQYTELYASICALQAHR*YTFPER
Trigger: TCTTTCTGGGAATGTGTACCATCTGTGTGCCTGCAG...GGCACAAATGGATGCATACAGTTCTGTGTACTGCCAGGCATGTGGGTGTGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR TCA 90 bp GCCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTGGGGGGTTTAGGTGTAAGTaGACTATTATCATTGGAGTG +
Preference number: 4 (lower is better)
Translates to: ALVDLREVDLSQGELWGGGFRCK*TIIIGV
Trigger: CACTCCAATGATAATAGTTCACTTACACCTAAACCC...CCCACCCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGGC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR GCA 90 bp GACACGGATTTCTTCCTGAACAAAGTCCCTCCCCTACATGGTGGACATGGGATGAAATGGTGCCACTTATaGCACCATGGCAGTCCATCT +
Preference number: 4 (lower is better)
Translates to: DTDFFLNKVPPLHGGHGMKWCHL*HHGSPS
Trigger: AGATGGACTGCCATGGTGGCATAAGTGGCACCATTT...CATCCCATGTCCACCATGTAGGGGAGGGACTTTGTTCAGGAAGAAATCCGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR GCA 90 bp AAAGGGTTGTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACAAAATGGTGCCACTTATaGCACCATGGCAGTCCATCT +
Preference number: 4 (lower is better)
Translates to: KGLSLSSTTQLQAHRWYTKWCHL*HHGSPS
Trigger: AGATGGACTGCCATGGTGGCATAAGTGGCACCATTT...TGTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGACAACCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR GCA 90 bp GCACACAGATGGTACACATTCCCAGAAAGACACATAGGTAGACACGTGGCTGTAGTATGCATCCATTTGTaGCAGGCTGGGGCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: AHRWYTFPERHIGRHVAVVCIHL*QAGALS
Trigger: ACTCAAGGCCCCAGCCTGGCACAAATGGATGCATAC...TACAGCCACGTGTCTACCTATGTGTCTTTCTGGGAATGTGTACCATCTGTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR GCA 90 bp CATCTGCCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTACACAGAACTGTATaGATCCATTTGTGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: HLPWLISGRLISLRENCGVHRTV*IHLCQA
Trigger: AGCCTGGCACAAATGGATGCATACAGTTCTGTGTAC...CCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGGCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR GCA 90 bp GTTGAGGTATCAGTTAGAGCAGAACAATTGGACCTAGAGCTGGTTTTTCCTTTGGGGGTCCGTGGCCCTTaGTGTCACATCTGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: VEVSVRAEQLDLELVFPLGVRGP*CHICLG
Trigger: ACCAAGGCAGATGTGACAGCAAGGGCCACGGACCCC...CAAAGGAAAAACCAGCTCTAGGTCCAATTGTTCTGCTCTAACTGATACCTCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp GTACACAGAACTGTATGCATCCATTTGTGCCAGGCTGGGGCCTTGAGTGATAGGCTCCGTACTCGTAAATaGTGCCACTTATGCCACCAT +
Preference number: 4 (lower is better)
Translates to: VHRTVCIHLCQAGALSDRLRTRK*CHLCHH
Trigger: ATGGTGGCATAAGTGGCACCATTTACGAGTACGGAG...CCTATCACTCAAGGCCCCAGCCTGGCACAAATGGATGCATACAGTTCTGTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp GCTGGCCCCAAGGTTGAGGTATCAGTTAGAGCAGAACAATTGGACCTAGAGCTGCTGCAGGCACACAGATaGTACACATTCCCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: AGPKVEVSVRAEQLDLELLQAHR*YTFPER
Trigger: TCTTTCTGGGAATGTGTACCATCTGTGTGCCTGCAG...CAGCTCTAGGTCCAATTGTTCTGCTCTAACTGATACCTCAACCTTGGGGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp TTCCTGAACAAAGTCCCTCCCCTACATGGTGGACATGGGATGAGACGGCCTTCAATTGGAGTGGAGAACTaGAGAGAAAGGGTTGTCACT +
Preference number: 4 (lower is better)
Translates to: FLNKVPPLHGGHGMRRPSIGVEN*RERVVT
Trigger: AGTGACAACCCTTTCTCTCCAGTTCTCCACTCCAAT...TGAAGGCCGTCTCATCCCATGTCCACCATGTAGGGGAGGGACTTTGTTCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp GAAAGGGTTGTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACATTGGAGTGGAGAACTaGAGAGAAAGGGTTGTCACT +
Preference number: 4 (lower is better)
Translates to: ERVVTVQHYTAAGTQMVHIGVEN*RERVVT
Trigger: AGTGACAACCCTTTCTCTCCAGTTCTCCACTCCAAT...GTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGACAACCCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR TCA 90 bp ACACAGCTGCAGGCACACAGATGGTACACATTCCCAGAAAGACACATAGGTAGAAGTAGCTGGCCACGTTaGCAAAGAGGACGTATTTGC +
Preference number: 4 (lower is better)
Translates to: TQLQAHRWYTFPERHIGRSSWPR*QRGRIC
Trigger: GCAAATACGTCCTCTTTGTCAACGTGGCCAGCTACT...TCTACCTATGTGTCTTTCTGGGAATGTGTACCATCTGTGTGCCTGCAGCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
CDS-3UTR GCA 90 bp GACACGGATTTCTTCCTGAACAAAGTCCCTCCCCTACATGGTGGACATGGGATGTATTTGCCAGCATACTaGTTGAAGGGGATGTACTCC +
Preference number: 4 (lower is better)
Translates to: DTDFFLNKVPPLHGGHGMYLPAY*LKGMYS
Trigger: GGAGTACATCCCCTTCAAGCAGTATGCTGGCAAATA...CATCCCATGTCCACCATGTAGGGGAGGGACTTTGTTCAGGAAGAAATCCGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp GTATCAGTTAGAGCAGAACAATTGGACCTAGAGCTGGTTTTTCCTTTGGGTTTACCCTCCCCTACATGGTaGACATGGGATGAGACGGCC +
Preference number: 4 (lower is better)
Translates to: VSVRAEQLDLELVFPLGLPSPTW*TWDETA
Trigger: GGCCGTCTCATCCCATGTCCACCATGTAGGGGAGGG...TAAACCCAAAGGAAAAACCAGCTCTAGGTCCAATTGTTCTGCTCTAACTGATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp AGCACTACACAGCTGCAGGCACACAGATGGTACACATTCCCAGAAAGACACATACCACACCCACATGCCTaGCAGTACACAGAACTGTAT +
Preference number: 4 (lower is better)
Translates to: STTQLQAHRWYTFPERHIPHPHA*QYTELY
Trigger: ATACAGTTCTGTGTACTGCCAGGCATGTGGGTGTGG...TATGTGTCTTTCTGGGAATGTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp AAAGGGTTGTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACAATTGGAGTGGAGAACTaGAGAGAAAGGGTTGTCACT +
Preference number: 4 (lower is better)
Translates to: KGLSLSSTTQLQAHRWYTIGVEN*RERVVT
Trigger: AGTGACAACCCTTTCTCTCCAGTTCTCCACTCCAAT...TGTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGACAACCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR TCA 90 bp CACCCACACCCACATGCCTGGCAGTACACAGAACTGTATGCATCCATTTGTGCCGGGTTTAGGTGTAAGTaGACTATTATCATTGGAGTG +
Preference number: 4 (lower is better)
Translates to: HPHPHAWQYTELYASICAGFRCK*TIIIGV
Trigger: CACTCCAATGATAATAGTTCACTTACACCTAAACCC...GGCACAAATGGATGCATACAGTTCTGTGTACTGCCAGGCATGTGGGTGTGGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR GCA 90 bp AGCACTACACAGCTGCAGGCACACAGATGGTACACATTCCCAGAAAGACACATAAAATGGTGCCACTTATaGCACCATGGCAGTCCATCT +
Preference number: 4 (lower is better)
Translates to: STTQLQAHRWYTFPERHIKWCHL*HHGSPS
Trigger: AGATGGACTGCCATGGTGGCATAAGTGGCACCATTT...TATGTGTCTTTCTGGGAATGTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR GCA 90 bp CACAGAACTGTATGCATCCATTTGTGCCAGGCTGGGGCCTTGAGTGATAGGAAATATTTGCCAGCATACTaGTTGAAGGGGATGTACTCC +
Preference number: 4 (lower is better)
Translates to: HRTVCIHLCQAGALSDRKYLPAY*LKGMYS
Trigger: GGAGTACATCCCCTTCAAGCAGTATGCTGGCAAATA...TTTCCTATCACTCAAGGCCCCAGCCTGGCACAAATGGATGCATACAGTTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR GCA 90 bp CAGCTGCAGGCACACAGATGGTACACATTCCCAGAAAGACACATAGGTAGACACGTACACAGAACTGTATaGATCCATTTGTGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: QLQAHRWYTFPERHIGRHVHRTV*IHLCQA
Trigger: AGCCTGGCACAAATGGATGCATACAGTTCTGTGTAC...GTGTCTACCTATGTGTCTTTCTGGGAATGTGTACCATCTGTGTGCCTGCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp GAAAGGGTTGTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACGTGAACTATTATCATTaGAGTGGAGAACTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: ERVVTVQHYTAAGTQMVHVNYYH*SGELER
Trigger: TCTCTCCAGTTCTCCACTCCAATGATAATAGTTCAC...GTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGACAACCCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR GCA 90 bp AGCACTACACAGCTGCAGGCACACAGATGGTACACATTCCCAGAAAGACACATATATTTGCCAGCATACTaGTTGAAGGGGATGTACTCC +
Preference number: 4 (lower is better)
Translates to: STTQLQAHRWYTFPERHIYLPAY*LKGMYS
Trigger: GGAGTACATCCCCTTCAAGCAGTATGCTGGCAAATA...TATGTGTCTTTCTGGGAATGTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR GCA 90 bp GCACACAGATGGTACACATTCCCAGAAAGACACATAGGTAGACACGTGGCTGTAGTACACAGAACTGTATaGATCCATTTGTGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: AHRWYTFPERHIGRHVAVVHRTV*IHLCQA
Trigger: AGCCTGGCACAAATGGATGCATACAGTTCTGTGTAC...TACAGCCACGTGTCTACCTATGTGTCTTTCTGGGAATGTGTACCATCTGTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp GTTGAGGTATCAGTTAGAGCAGAACAATTGGACCTAGAGCTGGTTTTTCCTTTGGACAAAGCCTCCACCTaGTCGGACATACTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: VEVSVRAEQLDLELVFPLDKAST*SDILEG
Trigger: ACCCTCAAGTATGTCCGACCAGGTGGAGGCTTTGTC...CAAAGGAAAAACCAGCTCTAGGTCCAATTGTTCTGCTCTAACTGATACCTCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp GTATCAGTTAGAGCAGAACAATTGGACCTAGAGCTGGTTTTTCCTTTGGGTTTAAGTCCCTCCCCTACATaGTGGACATGGGATGAGACG +
Preference number: 4 (lower is better)
Translates to: VSVRAEQLDLELVFPLGLSPSPT*WTWDET
Trigger: CGTCTCATCCCATGTCCACCATGTAGGGGAGGGACT...TAAACCCAAAGGAAAAACCAGCTCTAGGTCCAATTGTTCTGCTCTAACTGATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp GCTGGCCCCAAGGTTGAGGTATCAGTTAGAGCAGAACAATTGGACCTAGAGCTGGTGAACTATTATCATTaGAGTGGAGAACTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: AGPKVEVSVRAEQLDLELVNYYH*SGELER
Trigger: TCTCTCCAGTTCTCCACTCCAATGATAATAGTTCAC...CAGCTCTAGGTCCAATTGTTCTGCTCTAACTGATACCTCAACCTTGGGGCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp GCAGTACACAGAACTGTATGCATCCATTTGTGCCAGGCTGGGGCCTTGAGTGATATAGTTACTAATATTTaGAGGCAGTGGGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: AVHRTVCIHLCQAGALSDIVTNI*RQWEML
Trigger: CAGCATCTCCCACTGCCTCCAAATATTAGTAACTAT...ATCACTCAAGGCCCCAGCCTGGCACAAATGGATGCATACAGTTCTGTGTACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
3UTR CAA 72 bp GGCCCCAAGGTTGAGGTATCAGTTAGAGCAGAACAATaGGACCTAGAGCTGGTTTTTCCTTTGGGTTTAGGT +
Preference number: 4 (lower is better)
Translates to: GPKVEVSVRAEQ*DLELVFPLGLG
Trigger: ACCTAAACCCAAAGGAAAAACCAGCTCTAGGTCCAATTGTTCTGCTCTAACTGATACCTCAACCTTGGGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR TCA 90 bp ACATGCACCCACACCCACATGCCTGGCAGTACACAGAACTGTATGCATCCATTTGGGTTTAGGTGTAAGTaGACTATTATCATTGGAGTG +
Preference number: 4 (lower is better)
Translates to: TCTHTHMPGSTQNCMHPFGFRCK*TIIIGV
Trigger: CACTCCAATGATAATAGTTCACTTACACCTAAACCC...AAATGGATGCATACAGTTCTGTGTACTGCCAGGCATGTGGGTGTGGGTGCATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp CAGCTGCAGGCACACAGATGGTACACATTCCCAGAAAGACACATAGGTAGACACGTGAACTATTATCATTaGAGTGGAGAACTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: QLQAHRWYTFPERHIGRHVNYYH*SGELER
Trigger: TCTCTCCAGTTCTCCACTCCAATGATAATAGTTCAC...GTGTCTACCTATGTGTCTTTCTGGGAATGTGTACCATCTGTGTGCCTGCAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CCA 90 bp GTATCAGTTAGAGCAGAACAATTGGACCTAGAGCTGGTTTTTCCTTTGGGTTTACTCCGTACTCGTAAATaGTGCCACTTATGCCACCAT +
Preference number: 4 (lower is better)
Translates to: VSVRAEQLDLELVFPLGLLRTRK*CHLCHH
Trigger: ATGGTGGCATAAGTGGCACCATTTACGAGTACGGAG...TAAACCCAAAGGAAAAACCAGCTCTAGGTCCAATTGTTCTGCTCTAACTGATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
3UTR CAA 72 bp AGAGCAGAACAATTGGACCTAGAGCTGGTTTTTCCTTaGGGTTTAGGTGTAAGTGAACTATTATCATTGGAG +
Preference number: 4 (lower is better)
Translates to: RAEQLDLELVFP*GLGVSELLSLE
Trigger: CTCCAATGATAATAGTTCACTTACACCTAAACCCAAAGGAAAAACCAGCTCTAGGTCCAATTGTTCTGCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS TCA 90 bp TCAGGGTCGCCTGAGCCGCTGCCTGATCCCTGGCCACCGTCCGTCTaGGGTGTCCGGCGCTCCCAGCCACCTTTCAAGCCCTCGGGTGTG +
Preference number: 5 (lower is better)
Translates to: SGSPEPLPDPWPPSV*GVRRSQPPFKPSGV
Trigger: CACACCCGAGGGCTTGAAAGGTGGCTGGGAGCGCCGGACACCTCAGACGGACGGTGGCCAGGGATCAGGCAGCGGCTCAGGCGACCCTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622181.4
CDS CCA 90 bp AATCCGCGGCCAAGCCGAGACCCTTGCAGCCAATCGCTAGGCGGCTaGGATTTCAGGGGCGGGCGCGACTTGCCCTCAGCTCCCCACCTC +
Preference number: 5 (lower is better)
Translates to: NPRPSRDPCSQSLGG*DFRGGRDLPSAPHL
Trigger: GAGGTGGGGAGCTGAGGGCAAGTCGCGCCCGCCCCTGAAATCCCAGCCGCCTAGCGATTGGCTGCAAGGGTCTCGGCTTGGCCGCGGATT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622181.4
CDS GCA 90 bp TTGCCCATCTGGCGGGGAGCCTTCGACTTCTCTTGTCCCCGGCTCTaGGAGACGAAGCCGGCCAGGAGCAGGGAAAGCAGGCAGGACGCC +
Preference number: 5 (lower is better)
Translates to: LPIWRGAFDFSCPRL*ETKPARSRESRQDA
Trigger: GGCGTCCTGCCTGCTTTCCCTGCTCCTGGCCGGCTTCGTCTCGCAGAGCCGGGGACAAGAGAAGTCGAAGGCTCCCCGCCAGATGGGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519214.5
ENST00000521650.5
CDS GCA 90 bp TTCAAGCCCTCGGGTGTGACCAATCCGCGGCCAAGCCGAGACCCTTaGAGCCAATCGCTAGGCGGCTGGGATTTCAGGGGCGGGCGCGAC +
Preference number: 5 (lower is better)
Translates to: FKPSGVTNPRPSRDP*SQSLGGWDFRGGRD
Trigger: GTCGCGCCCGCCCCTGAAATCCCAGCCGCCTAGCGATTGGCTGCAAGGGTCTCGGCTTGGCCGCGGATTGGTCACACCCGAGGGCTTGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622181.4
CDS-3UTR CAA 90 bp AAGGCGACCCTCGAGGTGGCAGTGGGGAGAAAGTGCGAGCTCGGGGAGAGAGACTCTCGCACCTGGGGATaGCCCATCTGGCGGGGAGCC +
Preference number: 5 (lower is better)
Translates to: KATLEVAVGRKCELGERDSRTWG*PIWRGA
Trigger: GGCTCCCCGCCAGATGGGCAATCCCCAGGTGCGAGA...GTCTCTCTCCCCGAGCTCGCACTTTCTCCCCACTGCCACCTCGAGGGTCGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000519214.5
CDS TCA 90 bp ATCCACACCACTCCCCCGGCTCACCCGCTGTGCCGCTGGAACTACTaGGGCCCGAGAAAGGGAGGGACTTGCGCAGGATCACCAGTGAGT +
Preference number: 5 (lower is better)
Translates to: IHTTPPAHPLCRWNY*GPRKGGTCAGSPVS
Trigger: ACTCACTGGTGATCCTGCGCAAGTCCCTCCCTTTCTCGGGCCTCAGTAGTTCCAGCGGCACAGCGGGTGAGCCGGGGGAGTGGTGTGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000520597.1
ENST00000521722.5
CDS GCA 90 bp ATGCCACCATGGCAGTCCATCTTCGACTTCTCTTGTCCCCGGCTCTaGGAGACGAAGCCGGCCAGGAGCAGGGAAAGCAGGCAGGACGCC +
Preference number: 5 (lower is better)
Translates to: MPPWQSIFDFSCPRL*ETKPARSRESRQDA
Trigger: GGCGTCCTGCCTGCTTTCCCTGCTCCTGGCCGGCTTCGTCTCGCAGAGCCGGGGACAAGAGAAGTCGAAGATGGACTGCCATGGTGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521722.5
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CAA 90 bp CTGCCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTGAGGGGCGGGCGCGACTaGCCCTCAGCTCCCCACCTC +
Preference number: 5 (lower is better)
Translates to: LPWLISGRLISLRENCGVRGGRD*PSAPHL
Trigger: GAGGTGGGGAGCTGAGGGCAAGTCGCGCCCGCCCCT...CACCCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622181.4
CDS-3UTR CAA 90 bp GGCCTTAGCCTGAATGCACTAAGGGCTGGCCCCTCAGACAGGCTCAGGGGAGGTTGCCAGGCTGGGGCCTaGAGTGATAGGAAAGGGGTC +
Preference number: 5 (lower is better)
Translates to: GLSLNALRAGPSDRLRGGCQAGA*SDRKGV
Trigger: GACCCCTTTCCTATCACTCAAGGCCCCAGCCTGGCA...ACCTCCCCTGAGCCTGTCTGAGGGGCCAGCCCTTAGTGCATTCAGGCTAAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000622181.4
CDS-3UTR CAA 90 bp ACTGAAGGGGAGCAGCTCAGGCACGGAGGTGACATAGATGTAGCAAGGCGACCCTCTCTCCCTGGGAACTaGCACAGCCCACCCAGACGC +
Preference number: 5 (lower is better)
Translates to: TEGEQLRHGGDIDVARRPSLPGN*HSPPRR
Trigger: GCGTCTGGGTGGGCTGTGCAAGTTCCCAGGGAGAGA...GGGTCGCCTTGCTACATCTATGTCACCTCCGTGCCTGAGCTGCTCCCCTTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519214.5
CDS-3UTR CAA 90 bp TGGGATGAGACGGCCTTCAGTTACTTCCTCTTGACCCCCAGGGCTGCCTGCCGCGACAGGATGTCCATCTaGACGTTGCTGACCGTGGTC +
Preference number: 5 (lower is better)
Translates to: WDETAFSYFLLTPRAACRDRMSI*TLLTVV
Trigger: GACCACGGTCAGCAACGTCAAGATGGACATCCTGTC...GCGGCAGGCAGCCCTGGGGGTCAAGAGGAAGTAACTGAAGGCCGTCTCATCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517973.1
ENST00000614343.4
CDS-3UTR CAA 90 bp ACTGAAGGGGAGCAGCTCAGGCACGGAGGTGACATAGATGTAGCAAGGCGACCCAGCCTTCGACTTCTCTaGTCCCCGGCTCTGCGAGAC +
Preference number: 5 (lower is better)
Translates to: TEGEQLRHGGDIDVARRPSLRLL*SPALRD
Trigger: GTCTCGCAGAGCCGGGGACAAGAGAAGTCGAAGGCT...GGGTCGCCTTGCTACATCTATGTCACCTCCGTGCCTGAGCTGCTCCCCTTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519214.5
CDS-3UTR CAA 90 bp GGACAGGATGTCCATCTTGACGTTGCTGACCGTGGTCCGGTGGTGCCAGCGCATGTTCTTCGACTTCTCTaGTCCCCGGCTCTGCGAGAC +
Preference number: 5 (lower is better)
Translates to: GQDVHLDVADRGPVVPAHVLRLL*SPALRD
Trigger: GTCTCGCAGAGCCGGGGACAAGAGAAGTCGAAGAAC...ATGCGCTGGCACCACCGGACCACGGTCAGCAACGTCAAGATGGACATCCTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517973.1
CDS TCA 90 bp GAGCTCGGGGAGAGAGACCTTCCTCCCTTAGTCATTCTGCCCGCCTaGAGCACCAGGTCTCGGCTCTCCAACAGATGGAACTACGAGACG +
Preference number: 5 (lower is better)
Translates to: ELGERDLPPLVILPA*STRSRLSNRWNYET
Trigger: CGTCTCGTAGTTCCATCTGTTGGAGAGCCGAGACCTGGTGCTTCAGGCGGGCAGAATGACTAAGGGAGGAAGGTCTCTCTCCCCGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519214.5
CDS-3UTR CAA 90 bp GTTCCCAGAAGAGGCGGTCAGATGTACCCAGGAGCTCCGAGGTGGGAGGACAGGCCTGGTCGGACATACTaGAGGGTAGGAAGGATCTCT +
Preference number: 5 (lower is better)
Translates to: VPRRGGQMYPGAPRWEDRPGRTY*RVGRIS
Trigger: AGAGATCCTTCCTACCCTCAAGTATGTCCGACCAGG...CCTGTCCTCCCACCTCGGAGCTCCTGGGTACATCTGACCGCCTCTTCTGGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517973.1
ENST00000520059.1
ENST00000614343.4
CDS-3UTR CAA 90 bp CGTGAACCTTCATGGGTTCCCAGAAGAGGCGGTCAGATGTACCCAGGAGCTCCGATGTCCATCTTGACGTaGCTGACCGTGGTCCGGTGG +
Preference number: 5 (lower is better)
Translates to: REPSWVPRRGGQMYPGAPMSILT*LTVVRW
Trigger: CCACCGGACCACGGTCAGCAACGTCAAGATGGACAT...CGGAGCTCCTGGGTACATCTGACCGCCTCTTCTGGGAACCCATGAAGGTTCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517973.1
ENST00000614343.4
CDS-3UTR CAA 90 bp CCGCCTCATGTAGGACAGGATGTCCATCTTGACGTTGCTGACCGTGGTCCGGTGTTCAGTTACTTCCTCTaGACCCCCAGGGCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: PPHVGQDVHLDVADRGPVFSYFL*TPRAAC
Trigger: GCAGGCAGCCCTGGGGGTCAAGAGGAAGTAACTGAA...CACCGGACCACGGTCAGCAACGTCAAGATGGACATCCTGTCCTACATGAGGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517973.1
ENST00000614343.4
CDS-3UTR CAA 90 bp CGGTCAGATGTACCCAGGAGCTCCGAGGTGGGAGGACAGGAGTTCTTTAGGAAATGGGGTCCGTGGCCCTaGCTGTCACATCTGCCTTGG +
Preference number: 5 (lower is better)
Translates to: RSDVPRSSEVGGQEFFRKWGPWP*LSHLPW
Trigger: CCAAGGCAGATGTGACAGCAAGGGCCACGGACCCCA...TTTCCTAAAGAACTCCTGTCCTCCCACCTCGGAGCTCCTGGGTACATCTGACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614343.4
CDS-3UTR CAA 90 bp ATTTGGAGGCAGTGGGAGATGCTGGCCCCAAGGTTGAGGTATCAGTTAGAGCAGCCGCCCACAAGGGCTTaGGGCCCCTCCCTCATGAAG +
Preference number: 5 (lower is better)
Translates to: IWRQWEMLAPRLRYQLEQPPTRA*GPSLMK
Trigger: CTTCATGAGGGAGGGGCCCAAAGCCCTTGTGGGCGG...CTGCTCTAACTGATACCTCAACCTTGGGGCCAGCATCTCCCACTGCCTCCAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000622181.4
CDS-3UTR CAA 90 bp TCTGCCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTCCGCCCACAAGGGCTTaGGGCCCCTCCCTCATGAAG +
Preference number: 5 (lower is better)
Translates to: SALVDLREVDLSQGELWGPPTRA*GPSLMK
Trigger: CTTCATGAGGGAGGGGCCCAAAGCCCTTGTGGGCGG...ACCCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000622181.4
CDS-3UTR CAA 90 bp CACACCCACATGCCTGGCAGTACACAGAACTGTATGCATCCATTTGTGCCAGGCCCGCCCACAAGGGCTTaGGGCCCCTCCCTCATGAAG +
Preference number: 5 (lower is better)
Translates to: HTHMPGSTQNCMHPFVPGPPTRA*GPSLMK
Trigger: CTTCATGAGGGAGGGGCCCAAAGCCCTTGTGGGCGG...GCCTGGCACAAATGGATGCATACAGTTCTGTGTACTGCCAGGCATGTGGGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000622181.4
CDS-3UTR CAA 90 bp CGTGAACCTTCATGGGTTCCCAGAAGAGGCGGTCAGATGTACCCAGGAGCTCCGGAGTGTCAACCTTGCTaGAGGCCCCCTGACCCTCTT +
Preference number: 5 (lower is better)
Translates to: REPSWVPRRGGQMYPGAPECQPC*RPPDPL
Trigger: AAGAGGGTCAGGGGGCCTCAAGCAAGGTTGACACTC...CGGAGCTCCTGGGTACATCTGACCGCCTCTTCTGGGAACCCATGAAGGTTCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520059.1
CDS-3UTR CAA 90 bp CCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTGGGGTTCAGTTACTTCCTCTaGACCCCCAGGGCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: PWLISGRLISLRENCGVGFSYFL*TPRAAC
Trigger: GCAGGCAGCCCTGGGGGTCAAGAGGAAGTAACTGAA...CCCCACCCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CAA 90 bp ACATGCCTGGCAGTACACAGAACTGTATGCATCCATTTGTGCCAGGCTGGGGCCTGCCAGGCTGGGGCCTaGAGTGATAGGAAAGGGGTC +
Preference number: 5 (lower is better)
Translates to: TCLAVHRTVCIHLCQAGACQAGA*SDRKGV
Trigger: GACCCCTTTCCTATCACTCAAGGCCCCAGCCTGGCA...GGCCCCAGCCTGGCACAAATGGATGCATACAGTTCTGTGTACTGCCAGGCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CAA 90 bp GTTGTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACATTCCCTGGGGTCCGTGGCCCTaGCTGTCACATCTGCCTTGG +
Preference number: 5 (lower is better)
Translates to: VVTVQHYTAAGTQMVHIPWGPWP*LSHLPW
Trigger: CCAAGGCAGATGTGACAGCAAGGGCCACGGACCCCA...GGGAATGTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CAA 90 bp ATTTGGAGGCAGTGGGAGATGCTGGCCCCAAGGTTGAGGTATCAGTTAGAGCAGTGGGGTCCGTGGCCCTaGCTGTCACATCTGCCTTGG +
Preference number: 5 (lower is better)
Translates to: IWRQWEMLAPRLRYQLEQWGPWP*LSHLPW
Trigger: CCAAGGCAGATGTGACAGCAAGGGCCACGGACCCCA...CTGCTCTAACTGATACCTCAACCTTGGGGCCAGCATCTCCCACTGCCTCCAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS CCA 90 bp GTACATACTGTCAAAGGAGATAAGCATGCTGGGTCATCCCACTCCTaGCCTCAGTATCCCCACTCCAGGTGTGGGCCACACACCTGCTGG +
Preference number: 5 (lower is better)
Translates to: VHTVKGDKHAGSSHS*PQYPHSRCGPHTCW
Trigger: CCAGCAGGTGTGTGGCCCACACCTGGAGTGGGGATACTGAGGCCAGGAGTGGGATGACCCAGCATGCTTATCTCCTTTGACAGTATGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625178.1
CDS-3UTR CAA 90 bp CCTACATGGTGGACATGGGATGAGACGGCCTTCAGTTACTTCCTCTTGACCCCCATGTCCATCTTGACGTaGCTGACCGTGGTCCGGTGG +
Preference number: 5 (lower is better)
Translates to: PTWWTWDETAFSYFLLTPMSILT*LTVVRW
Trigger: CCACCGGACCACGGTCAGCAACGTCAAGATGGACAT...GGGGGTCAAGAGGAAGTAACTGAAGGCCGTCTCATCCCATGTCCACCATGTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517973.1
ENST00000614343.4
CDS-3UTR CAA 90 bp AGTGGACCAGTGAGGGGTGAGGGCACGTCCTCCGAAGGAGCAGGGGTGGCATCCGAGCTGGTTTTTCCTTaGGGTTTAGGTGTAAGTGAA +
Preference number: 5 (lower is better)
Translates to: SGPVRGEGTSSEGAGVASELVFP*GLGVSE
Trigger: TTCACTTACACCTAAACCCAAAGGAAAAACCAGCTC...GGATGCCACCCCTGCTCCTTCGGAGGACGTGCCCTCACCCCTCACTGGTCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000622181.4
CDS-3UTR CAA 90 bp GGCAGACGGGGTGAGTCTCAAGCCAGTGGACCAGTGAGGGGTGAGGGCACGTCCGAGCTGGTTTTTCCTTaGGGTTTAGGTGTAAGTGAA +
Preference number: 5 (lower is better)
Translates to: GRRGESQASGPVRGEGTSELVFP*GLGVSE
Trigger: TTCACTTACACCTAAACCCAAAGGAAAAACCAGCTC...GGACGTGCCCTCACCCCTCACTGGTCCACTGGCTTGAGACTCACCCCGTCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CAA 90 bp GTACACAGAACTGTATGCATCCATTTGTGCCAGGCTGGGGCCTTGAGTGATAGGTGGGGTCCGTGGCCCTaGCTGTCACATCTGCCTTGG +
Preference number: 5 (lower is better)
Translates to: VHRTVCIHLCQAGALSDRWGPWP*LSHLPW
Trigger: CCAAGGCAGATGTGACAGCAAGGGCCACGGACCCCA...CCTATCACTCAAGGCCCCAGCCTGGCACAAATGGATGCATACAGTTCTGTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CAA 90 bp GTGAACCTTCATGGGTTCCCAGAAGAGGCGGTCAGATGTACCCAGGAGCTCCGACCTGGTCGGACATACTaGAGGGTAGGAAGGATCTCT +
Preference number: 5 (lower is better)
Translates to: VNLHGFPEEAVRCTQELRPGRTY*RVGRIS
Trigger: AGAGATCCTTCCTACCCTCAAGTATGTCCGACCAGG...TCGGAGCTCCTGGGTACATCTGACCGCCTCTTCTGGGAACCCATGAAGGTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517973.1
ENST00000520059.1
ENST00000614343.4
CDS-3UTR CAA 90 bp TTCTTCCTGAACAAAGTCCCTCCCCTACATGGTGGACATGGGATGAGACGGCCTATGTCCATCTTGACGTaGCTGACCGTGGTCCGGTGG +
Preference number: 5 (lower is better)
Translates to: FFLNKVPPLHGGHGMRRPMSILT*LTVVRW
Trigger: CCACCGGACCACGGTCAGCAACGTCAAGATGGACAT...AGGCCGTCTCATCCCATGTCCACCATGTAGGGGAGGGACTTTGTTCAGGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CAA 90 bp ACATGCCTGGCAGTACACAGAACTGTATGCATCCATTTGTGCCAGGCTGGGGCCGACAGGATGTCCATCTaGACGTTGCTGACCGTGGTC +
Preference number: 5 (lower is better)
Translates to: TCLAVHRTVCIHLCQAGADRMSI*TLLTVV
Trigger: GACCACGGTCAGCAACGTCAAGATGGACATCCTGTC...GGCCCCAGCCTGGCACAAATGGATGCATACAGTTCTGTGTACTGCCAGGCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CAA 90 bp TTCTTCCTGAACAAAGTCCCTCCCCTACATGGTGGACATGGGATGAGACGGCCTTTCAGTTACTTCCTCTaGACCCCCAGGGCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: FFLNKVPPLHGGHGMRRPFSYFL*TPRAAC
Trigger: GCAGGCAGCCCTGGGGGTCAAGAGGAAGTAACTGAA...AGGCCGTCTCATCCCATGTCCACCATGTAGGGGAGGGACTTTGTTCAGGAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CAA 90 bp TCTGCCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGGTTTCAGTTACTTCCTCTaGACCCCCAGGGCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: SALVDLREVDLSQGELWGFSYFL*TPRAAC
Trigger: GCAGGCAGCCCTGGGGGTCAAGAGGAAGTAACTGAA...ACCCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CAA 90 bp CAGTGGGAGATGCTGGCCCCAAGGTTGAGGTATCAGTTAGAGCAGAACAATTGGTGCCAGGCTGGGGCCTaGAGTGATAGGAAAGGGGTC +
Preference number: 5 (lower is better)
Translates to: QWEMLAPRLRYQLEQNNWCQAGA*SDRKGV
Trigger: GACCCCTTTCCTATCACTCAAGGCCCCAGCCTGGCA...CCAATTGTTCTGCTCTAACTGATACCTCAACCTTGGGGCCAGCATCTCCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CAA 90 bp AGAAAGGGTTGTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACATGCCAGGCTGGGGCCTaGAGTGATAGGAAAGGGGTC +
Preference number: 5 (lower is better)
Translates to: RKGCHCPALHSCRHTDGTCQAGA*SDRKGV
Trigger: GACCCCTTTCCTATCACTCAAGGCCCCAGCCTGGCA...TGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGACAACCCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CAA 90 bp CAGTGGGAGATGCTGGCCCCAAGGTTGAGGTATCAGTTAGAGCAGAACAATTGGCATCTTCGACTTCTCTaGTCCCCGGCTCTGCGAGAC +
Preference number: 5 (lower is better)
Translates to: QWEMLAPRLRYQLEQNNWHLRLL*SPALRD
Trigger: GTCTCGCAGAGCCGGGGACAAGAGAAGTCGAAGATG...CCAATTGTTCTGCTCTAACTGATACCTCAACCTTGGGGCCAGCATCTCCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CAA 90 bp CGGGGAGAGAGACCTTCCTCCCTTAGTCATTCTGCCCGCCTGAAGCACCAGGTCACAAAGAGGACGTATTaGCCAGCATACTGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: RGERPSSLSHSARLKHQVTKRTY*PAYCLK
Trigger: CTTCAAGCAGTATGCTGGCAAATACGTCCTCTTTGT...GACCTGGTGCTTCAGGCGGGCAGAATGACTAAGGGAGGAAGGTCTCTCTCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519214.5
CDS-3UTR CAA 90 bp AGGGTTGTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACATTATGTCCATCTTGACGTaGCTGACCGTGGTCCGGTGG +
Preference number: 5 (lower is better)
Translates to: RVVTVQHYTAAGTQMVHIMSILT*LTVVRW
Trigger: CCACCGGACCACGGTCAGCAACGTCAAGATGGACAT...AATGTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGACAACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CAA 90 bp AGAAAGGGTTGTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACAATGTCCATCTTGACGTaGCTGACCGTGGTCCGGTGG +
Preference number: 5 (lower is better)
Translates to: RKGCHCPALHSCRHTDGTMSILT*LTVVRW
Trigger: CCACCGGACCACGGTCAGCAACGTCAAGATGGACAT...TGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGACAACCCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CAA 90 bp AGGGTTGTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACATTTTCAGTTACTTCCTCTaGACCCCCAGGGCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: RVVTVQHYTAAGTQMVHIFSYFL*TPRAAC
Trigger: GCAGGCAGCCCTGGGGGTCAAGAGGAAGTAACTGAA...AATGTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGACAACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CAA 90 bp ACATGCCTGGCAGTACACAGAACTGTATGCATCCATTTGTGCCAGGCTGGGGCCGGGAGGACAGGAGTTTaGAGGGTAGGAAGGATCTCT +
Preference number: 5 (lower is better)
Translates to: TCLAVHRTVCIHLCQAGAGRTGV*RVGRIS
Trigger: AGAGATCCTTCCTACCCTCAAAACTCCTGTCCTCCC...GGCCCCAGCCTGGCACAAATGGATGCATACAGTTCTGTGTACTGCCAGGCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521632.1
CDS CCA 90 bp GCAGAGAACTTCTTTGGGGTGAGGTTACAACCCTCCCATAATCTTTaGCAAATCAGGAACACAGATGAGGCCCTGGCCCAGCTCCCCAGT +
Preference number: 5 (lower is better)
Translates to: AENFFGVRLQPSHNL*QIRNTDEALAQLPS
Trigger: ACTGGGGAGCTGGGCCAGGGCCTCATCTGTGTTCCTGATTTGCCAAAGATTATGGGAGGGTTGTAACCTCACCCCAAAGAAGTTCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520597.1
CDS-3UTR CAA 90 bp CACAGAACTGTATGCATCCATTTGTGCCAGGCTGGGGCCTTGAGTGATAGGAAACATCTTCGACTTCTCTaGTCCCCGGCTCTGCGAGAC +
Preference number: 5 (lower is better)
Translates to: HRTVCIHLCQAGALSDRKHLRLL*SPALRD
Trigger: GTCTCGCAGAGCCGGGGACAAGAGAAGTCGAAGATG...TTTCCTATCACTCAAGGCCCCAGCCTGGCACAAATGGATGCATACAGTTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CAA 90 bp TTCCTGAACAAAGTCCCTCCCCTACATGGTGGACATGGGATGAGACGGCCTTCACCTGGTCGGACATACTaGAGGGTAGGAAGGATCTCT +
Preference number: 5 (lower is better)
Translates to: FLNKVPPLHGGHGMRRPSPGRTY*RVGRIS
Trigger: AGAGATCCTTCCTACCCTCAAGTATGTCCGACCAGG...TGAAGGCCGTCTCATCCCATGTCCACCATGTAGGGGAGGGACTTTGTTCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CAA 90 bp TTGTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACATTCCCAGACAGGATGTCCATCTaGACGTTGCTGACCGTGGTC +
Preference number: 5 (lower is better)
Translates to: LSLSSTTQLQAHRWYTFPDRMSI*TLLTVV
Trigger: GACCACGGTCAGCAACGTCAAGATGGACATCCTGTC...TGGGAATGTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CAA 90 bp CTTGACCCCCAGGGCTGCCTGCCGCCTCATGTAGGACAGGATGTCCATCTTGACGAGCTGGTTTTTCCTTaGGGTTTAGGTGTAAGTGAA +
Preference number: 5 (lower is better)
Translates to: LDPQGCLPPHVGQDVHLDELVFP*GLGVSE
Trigger: TTCACTTACACCTAAACCCAAAGGAAAAACCAGCTC...GTCAAGATGGACATCCTGTCCTACATGAGGCGGCAGGCAGCCCTGGGGGTCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000614343.4
CDS-3UTR CAA 90 bp GAAAGGGTTGTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACATGCTGGCCCCAAGGTaGAGGTATCAGTTAGAGCAG +
Preference number: 5 (lower is better)
Translates to: ERVVTVQHYTAAGTQMVHMLAPR*RYQLEQ
Trigger: CTGCTCTAACTGATACCTCAACCTTGGGGCCAGCAT...GTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGACAACCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CAA 90 bp CATCTGCCTTGGTTGATCTCAGGGAGGTTGATCTCTCTCAGGGAGAACTGTGGGATGCTGGCCCCAAGGTaGAGGTATCAGTTAGAGCAG +
Preference number: 5 (lower is better)
Translates to: HLPWLISGRLISLRENCGMLAPR*RYQLEQ
Trigger: CTGCTCTAACTGATACCTCAACCTTGGGGCCAGCAT...CCCACAGTTCTCCCTGAGAGAGATCAACCTCCCTGAGATCAACCAAGGCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS TCA 90 bp CCTCCACCTGGGCCAGCTAGAGCACTCATTCAGAACCCTCAGGATTaGGTTTTCTGGAGCAAGAACTATCCATCCCTGGATACAAGGCAG +
Preference number: 5 (lower is better)
Translates to: PPPGPARALIQNPQD*VFWSKNYPSLDTRQ
Trigger: CTGCCTTGTATCCAGGGATGGATAGTTCTTGCTCCAGAAAACTCAATCCTGAGGGTTCTGAATGAGTGCTCTAGCTGGCCCAGGTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520597.1
CDS-3UTR CAA 90 bp AGCACTACACAGCTGCAGGCACACAGATGGTACACATTCCCAGAAAGACACATACATCTTCGACTTCTCTaGTCCCCGGCTCTGCGAGAC +
Preference number: 5 (lower is better)
Translates to: STTQLQAHRWYTFPERHIHLRLL*SPALRD
Trigger: GTCTCGCAGAGCCGGGGACAAGAGAAGTCGAAGATG...TATGTGTCTTTCTGGGAATGTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CAA 90 bp AGGGTTGTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACATTCCTGGTCGGACATACTaGAGGGTAGGAAGGATCTCT +
Preference number: 5 (lower is better)
Translates to: RVVTVQHYTAAGTQMVHIPGRTY*RVGRIS
Trigger: AGAGATCCTTCCTACCCTCAAGTATGTCCGACCAGG...AATGTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGACAACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CAA 90 bp GGTTGGAGACACGGATTTCTTCCTGAACAAAGTCCCTCCCCTACATGGTGGACACCTGGTCGGACATACTaGAGGGTAGGAAGGATCTCT +
Preference number: 5 (lower is better)
Translates to: GWRHGFLPEQSPSPTWWTPGRTY*RVGRIS
Trigger: AGAGATCCTTCCTACCCTCAAGTATGTCCGACCAGG...TGTCCACCATGTAGGGGAGGGACTTTGTTCAGGAAGAAATCCGTGTCTCCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388825.9
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CAA 90 bp TGGGTAGATAGTGTGGTTGGAGACACGGATTTCTTCCTGAACAAAGTCCCTCCCGACAGGATGTCCATCTaGACGTTGCTGACCGTGGTC +
Preference number: 5 (lower is better)
Translates to: WVDSVVGDTDFFLNKVPPDRMSI*TLLTVV
Trigger: GACCACGGTCAGCAACGTCAAGATGGACATCCTGTC...GGGAGGGACTTTGTTCAGGAAGAAATCCGTGTCTCCAACCACACTATCTACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CAA 90 bp TTGTCACTGTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACATTCCCAATGCTGGCCCCAAGGTaGAGGTATCAGTTAGAGCAG +
Preference number: 5 (lower is better)
Translates to: LSLSSTTQLQAHRWYTFPMLAPR*RYQLEQ
Trigger: CTGCTCTAACTGATACCTCAACCTTGGGGCCAGCAT...TGGGAATGTGTACCATCTGTGTGCCTGCAGCTGTGTAGTGCTGGACAGTGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CAA 90 bp GCTGGCCCCAAGGTTGAGGTATCAGTTAGAGCAGAACAATTGGACCTAGAGCTGATGCTGGCCCCAAGGTaGAGGTATCAGTTAGAGCAG +
Preference number: 5 (lower is better)
Translates to: AGPKVEVSVRAEQLDLELMLAPR*RYQLEQ
Trigger: CTGCTCTAACTGATACCTCAACCTTGGGGCCAGCAT...CAGCTCTAGGTCCAATTGTTCTGCTCTAACTGATACCTCAACCTTGGGGCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CAA 90 bp CACACCCACATGCCTGGCAGTACACAGAACTGTATGCATCCATTTGTGCCAGGCGAGCTGGTTTTTCCTTaGGGTTTAGGTGTAAGTGAA +
Preference number: 5 (lower is better)
Translates to: HTHMPGSTQNCMHPFVPGELVFP*GLGVSE
Trigger: TTCACTTACACCTAAACCCAAAGGAAAAACCAGCTC...GCCTGGCACAAATGGATGCATACAGTTCTGTGTACTGCCAGGCATGTGGGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS CCA 90 bp AGAACCCTCAGGATTGAGTTTTCTGGAGCAAGAACTATCCATCCCTaGATACAAGGCAGAGAACTTCTTTGGGGTGAGGTTACAACCCTC +
Preference number: 5 (lower is better)
Translates to: RTLRIEFSGARTIHP*IQGRELLWGEVTTL
Trigger: GAGGGTTGTAACCTCACCCCAAAGAAGTTCTCTGCCTTGTATCCAGGGATGGATAGTTCTTGCTCCAGAAAACTCAATCCTGAGGGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520597.1
CDS-3UTR CAA 90 bp GTACACAGAACTGTATGCATCCATTTGTGCCAGGCTGGGGCCTTGAGTGATAGGGTTAGAGCAGAACAATaGGACCTAGAGCTGGTTTTT +
Preference number: 5 (lower is better)
Translates to: VHRTVCIHLCQAGALSDRVRAEQ*DLELVF
Trigger: AAAAACCAGCTCTAGGTCCAATTGTTCTGCTCTAAC...CCTATCACTCAAGGCCCCAGCCTGGCACAAATGGATGCATACAGTTCTGTGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS-3UTR CAA 90 bp CACAGAACTGTATGCATCCATTTGTGCCAGGCTGGGGCCTTGAGTGATAGGAAAGTTAGAGCAGAACAATaGGACCTAGAGCTGGTTTTT +
Preference number: 5 (lower is better)
Translates to: HRTVCIHLCQAGALSDRKVRAEQ*DLELVF
Trigger: AAAAACCAGCTCTAGGTCCAATTGTTCTGCTCTAAC...TTTCCTATCACTCAAGGCCCCAGCCTGGCACAAATGGATGCATACAGTTCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS TCA 90 bp AAGAACTATCCATCCCTGGATACAAGGCAGAGAACTTCTTTGGGGTaGGGTTACAACCCTCCCATAATCTTTGGCAAATCAGGAACACAG +
Preference number: 5 (lower is better)
Translates to: KNYPSLDTRQRTSLG*GYNPPIIFGKSGTQ
Trigger: CTGTGTTCCTGATTTGCCAAAGATTATGGGAGGGTTGTAACCTCACCCCAAAGAAGTTCTCTGCCTTGTATCCAGGGATGGATAGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520597.1
CDS-3UTR CAA 90 bp GTTGAGGTATCAGTTAGAGCAGAACAATTGGACCTAGAGCTGGTTTTTCCTTTGACAAAGAGGACGTATTaGCCAGCATACTGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: VEVSVRAEQLDLELVFPLTKRTY*PAYCLK
Trigger: CTTCAAGCAGTATGCTGGCAAATACGTCCTCTTTGT...CAAAGGAAAAACCAGCTCTAGGTCCAATTGTTCTGCTCTAACTGATACCTCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521632.1
ENST00000614343.4
ENST00000622181.4
CDS TCA 72 bp TCCGGCGCTCCCAGCCACCTTTCAAGCCCTCGGGTGTaGCCAATCCGCGGCCAAGCCGAGACCCTTGCAGCC +
Preference number: 6 (lower is better)
Translates to: SGAPSHLSSPRV*PIRGQAETLAA
Trigger: GGCTGCAAGGGTCTCGGCTTGGCCGCGGATTGGTCACACCCGAGGGCTTGAAAGGTGGCTGGGAGCGCCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622181.4
CDS GCA 72 bp TGGCGGGGAGCCTTCGACTTCTCTTGTCCCCGGCTCTaGGAGACGAAGCCGGCCAGGAGCAGGGAAAGCAGG +
Preference number: 6 (lower is better)
Translates to: WRGAFDFSCPRL*ETKPARSRESR
Trigger: CCTGCTTTCCCTGCTCCTGGCCGGCTTCGTCTCGCAGAGCCGGGGACAAGAGAAGTCGAAGGCTCCCCGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519214.5
ENST00000521650.5
CDS CCA 72 bp CCAAGCCGAGACCCTTGCAGCCAATCGCTAGGCGGCTaGGATTTCAGGGGCGGGCGCGACTTGCCCTCAGCT +
Preference number: 6 (lower is better)
Translates to: PSRDPCSQSLGG*DFRGGRDLPSA
Trigger: AGCTGAGGGCAAGTCGCGCCCGCCCCTGAAATCCCAGCCGCCTAGCGATTGGCTGCAAGGGTCTCGGCTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622181.4
CDS CAA 90 bp TTTCAAGCCCTCGGGTGTGACCAATCCGCGGCCAAGCCGAGACCCTaGCAGCCAATCGCTAGGCGGCTGGGATTTCAGGGGCGGGCGCGA +
Preference number: 6 (lower is better)
Translates to: FQALGCDQSAAKPRP*QPIARRLGFQGRAR
Trigger: TCGCGCCCGCCCCTGAAATCCCAGCCGCCTAGCGATTGGCTGCAAGGGTCTCGGCTTGGCCGCGGATTGGTCACACCCGAGGGCTTGAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622181.4
CDS GCA 72 bp TCGGGTGTGACCAATCCGCGGCCAAGCCGAGACCCTTaGAGCCAATCGCTAGGCGGCTGGGATTTCAGGGGC +
Preference number: 6 (lower is better)
Translates to: SGVTNPRPSRDP*SQSLGGWDFRG
Trigger: GCCCCTGAAATCCCAGCCGCCTAGCGATTGGCTGCAAGGGTCTCGGCTTGGCCGCGGATTGGTCACACCCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622181.4
CDS GCA 72 bp TGGCAGTCCATCTTCGACTTCTCTTGTCCCCGGCTCTaGGAGACGAAGCCGGCCAGGAGCAGGGAAAGCAGG +
Preference number: 6 (lower is better)
Translates to: WQSIFDFSCPRL*ETKPARSRESR
Trigger: CCTGCTTTCCCTGCTCCTGGCCGGCTTCGTCTCGCAGAGCCGGGGACAAGAGAAGTCGAAGATGGACTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388825.9
ENST00000521722.5
ENST00000614343.4
ENST00000622181.4
CDS GCA 72 bp TGCATTCAGTTCTTCGACTTCTCTTGTCCCCGGCTCTaGGAGACGAAGCCGGCCAGGAGCAGGGAAAGCAGG +
Preference number: 6 (lower is better)
Translates to: CIQFFDFSCPRL*ETKPARSRESR
Trigger: CCTGCTTTCCCTGCTCCTGGCCGGCTTCGTCTCGCAGAGCCGGGGACAAGAGAAGTCGAAGAACTGAATGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517973.1
CDS CCA 72 bp CTGGGCCAAAGAGAAAGAGCAGATGTGGGAGTATCCTaGCGAGGAGCCCTGTCTCATCCACACCACTCCCCC +
Preference number: 6 (lower is better)
Translates to: LGQRERADVGVS*RGALSHPHHSP
Trigger: GGGGGAGTGGTGTGGATGAGACAGGGCTCCTCGCCAGGATACTCCCACATCTGCTCTTTCTCTTTGGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520597.1
CDS TCA 72 bp GAGAGAGACCTTCCTCCCTTAGTCATTCTGCCCGCCTaGAGCACCAGGTCTCGGCTCTCCAACAGATGGAAC +
Preference number: 6 (lower is better)
Translates to: ERDLPPLVILPA*STRSRLSNRWN
Trigger: GTTCCATCTGTTGGAGAGCCGAGACCTGGTGCTTCAGGCGGGCAGAATGACTAAGGGAGGAAGGTCTCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519214.5
CDS CAA 90 bp TCACCAGTGAGTTCACAGCAATGCTGGGACTCAGGTCCTATCCTCTaGACTCTAATCAATGTACTGGCCCGTCAGGCCTCAGTAGCTGGC +
Preference number: 6 (lower is better)
Translates to: SPVSSQQCWDSGPIL*TLINVLARQASVAG
Trigger: GCCAGCTACTGAGGCCTGACGGGCCAGTACATTGATTAGAGTCAAGAGGATAGGACCTGAGTCCCAGCATTGCTGTGAACTCACTGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521722.5
CDS CAA 90 bp TGTGAGTTATGCATGTTGGGAAGTTGGAGACAGAAATCGCTCGCTTaGAGTCTATCCCTACACCTGGCTTCTGCCTCCTTCCCCACCCAC +
Preference number: 6 (lower is better)
Translates to: CELCMLGSWRQKSLA*SLSLHLASASFPTH
Trigger: GTGGGTGGGGAAGGAGGCAGAAGCCAGGTGTAGGGATAGACTCAAAGCGAGCGATTTCTGTCTCCAACTTCCCAACATGCATAACTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625178.1
CDS CCA 72 bp TTCTTTGGGGTGAGGTTACAACCCTCCCATAATCTTTaGCAAATCAGGAACACAGATGAGGCCCTGGCCCAG +
Preference number: 6 (lower is better)
Translates to: FFGVRLQPSHNL*QIRNTDEALAQ
Trigger: CTGGGCCAGGGCCTCATCTGTGTTCCTGATTTGCCAAAGATTATGGGAGGGTTGTAACCTCACCCCAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520597.1
CDS CAA 72 bp AGTTCACAGCAATGCTGGGACTCAGGTCCTATCCTCTaGACTCTAATCAATGTACTGGCCCGTCAGGCCTCA +
Preference number: 6 (lower is better)
Translates to: SSQQCWDSGPIL*TLINVLARQAS
Trigger: TGAGGCCTGACGGGCCAGTACATTGATTAGAGTCAAGAGGATAGGACCTGAGTCCCAGCATTGCTGTGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521722.5
CDS CAA 72 bp TGCATGTTGGGAAGTTGGAGACAGAAATCGCTCGCTTaGAGTCTATCCCTACACCTGGCTTCTGCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: CMLGSWRQKSLA*SLSLHLASASF
Trigger: GAAGGAGGCAGAAGCCAGGTGTAGGGATAGACTCAAAGCGAGCGATTTCTGTCTCCAACTTCCCAACATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625178.1
CDS TCA 72 bp GGGCCAGCTAGAGCACTCATTCAGAACCCTCAGGATTaGGTTTTCTGGAGCAAGAACTATCCATCCCTGGAT +
Preference number: 6 (lower is better)
Translates to: GPARALIQNPQD*VFWSKNYPSLD
Trigger: ATCCAGGGATGGATAGTTCTTGCTCCAGAAAACTCAATCCTGAGGGTTCTGAATGAGTGCTCTAGCTGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520597.1
CDS CAA 72 bp AGTTCACAGCAATGCTGGGACTCAGGTCCTATCCTCTaGACTCTAATCTGGATGGATTGGAGGTTTGGAGGA +
Preference number: 6 (lower is better)
Translates to: SSQQCWDSGPIL*TLIWMDWRFGG
Trigger: TCCTCCAAACCTCCAATCCATCCAGATTAGAGTCAAGAGGATAGGACCTGAGTCCCAGCATTGCTGTGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520597.1
CDS CAA 90 bp ATGCTGGGACTCAGGTCCTATCCTCTTGACTCTAATCTGGATGGATaGGAGGTTTGGAGGACAAGAATAATACCCTTCCTCAAGTCAGCT +
Preference number: 6 (lower is better)
Translates to: MLGLRSYPLDSNLDG*EVWRTRIIPFLKSA
Trigger: AGCTGACTTGAGGAAGGGTATTATTCTTGTCCTCCAAACCTCCAATCCATCCAGATTAGAGTCAAGAGGATAGGACCTGAGTCCCAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520597.1
CDS CCA 72 bp AGGATTGAGTTTTCTGGAGCAAGAACTATCCATCCCTaGATACAAGGCAGAGAACTTCTTTGGGGTGAGGTT +
Preference number: 6 (lower is better)
Translates to: RIEFSGARTIHP*IQGRELLWGEV
Trigger: AACCTCACCCCAAAGAAGTTCTCTGCCTTGTATCCAGGGATGGATAGTTCTTGCTCCAGAAAACTCAATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520597.1