RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPX1 (Homo sapiens)

Ensembl gene IDs: ENSG00000233276

Ensembl transcript IDs: ENST00000419349.2, ENST00000496791.2

Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGAGCAACAGAAAGGAAACGAGAGAGTAGCCAGACTCTCCGCGCATaGAGCCGACGGCACCCACCAGCACACCGCCGGCGCCCCCAGCCA +
Preference number: 1 (lower is better)
Translates to: RATERKRESSQTLRA*SRRHPPAHRRRPQP
Trigger: TGGCTGGGGGCGCCGGCGGTGTGCTGGTGGGTGCCGTCGGCTCCATGCGCGGAGAGTCTGGCTACTCTCTCGTTTCCTTTCTGTTGCTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419349.2
3UTR TCA 90 bp GAGGAGGAGAGAAACGTTCTAACCACAAACAAGGGAGATTTTCTATaGGTCACCGGGATTTTGCCCTCCATGCGCAATCCCAAGGGCGGA +
Preference number: 1 (lower is better)
Translates to: EEERNVLTTNKGDFL*VTGILPSMRNPKGG
Trigger: TCCGCCCTTGGGATTGCGCATGGAGGGCAAAATCCCGGTGACTCATAGAAAATCTCCCTTGTTTGTGGTTAGAACGTTTCTCTCCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419349.2
3UTR GCA 90 bp CAAACAAGGGAGATTTTCTATGAGTCACCGGGATTTTGCCCTCCATaGGCAATCCCAAGGGCGGAGAGGAATTTCAGCAGCTACGAGCAA +
Preference number: 1 (lower is better)
Translates to: QTREIFYESPGFCPP*AIPRAERNFSSYEQ
Trigger: TTGCTCGTAGCTGCTGAAATTCCTCTCCGCCCTTGGGATTGCGCATGGAGGGCAAAATCCCGGTGACTCATAGAAAATCTCCCTTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419349.2
3UTR-3UTR CCA 90 bp CGGGATTTTGCCCTCCATGCGCAATCCCAAGGGCGGAGAGGAATTTCAGCAGCTCAGACTCTCCGCGCATaGAGCCGACGGCACCCACCA +
Preference number: 2 (lower is better)
Translates to: RDFALHAQSQGRRGISAAQTLRA*SRRHPP
Trigger: TGGTGGGTGCCGTCGGCTCCATGCGCGGAGAGTCTG...AGCTGCTGAAATTCCTCTCCGCCCTTGGGATTGCGCATGGAGGGCAAAATCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419349.2
3UTR GCA 72 bp GAGATTTTCTATGAGTCACCGGGATTTTGCCCTCCATaGGCAATCCCAAGGGCGGAGAGGAATTTCAGCAGC +
Preference number: 3 (lower is better)
Translates to: EIFYESPGFCPP*AIPRAERNFSS
Trigger: GCTGCTGAAATTCCTCTCCGCCCTTGGGATTGCGCATGGAGGGCAAAATCCCGGTGACTCATAGAAAATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419349.2
3UTR GCA 72 bp CAAACAAGGGAGATTTTCTATGAGTCACCGGGATTTTaGCCTCCATGCGCAATCCCAAGGGCGGAGAGGAAT +
Preference number: 3 (lower is better)
Translates to: QTREIFYESPGF*PPCAIPRAERN
Trigger: ATTCCTCTCCGCCCTTGGGATTGCGCATGGAGGGCAAAATCCCGGTGACTCATAGAAAATCTCCCTTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419349.2
3UTR TCA 72 bp AGAAACGTTCTAACCACAAACAAGGGAGATTTTCTATaGGTCACCGGGATTTTGCCCTCCATGCGCAATCCC +
Preference number: 3 (lower is better)
Translates to: RNVLTTNKGDFL*VTGILPSMRNP
Trigger: GGGATTGCGCATGGAGGGCAAAATCCCGGTGACTCATAGAAAATCTCCCTTGTTTGTGGTTAGAACGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419349.2
CDS-3UTR CCA 90 bp AACGAGAGAGTAGCCAGACTCTCCGCGCATGGAGCCGACGGCACCCACCAGCACAAGGCATACACCGACTaGGCCGCCGCCGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: NERVARLSAHGADGTHQHKAYTD*AAAAAA
Trigger: GGCGGCGGCGGCGGCGGCCCAGTCGGTGTATGCCTT...GTGCTGGTGGGTGCCGTCGGCTCCATGCGCGGAGAGTCTGGCTACTCTCTCGTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419349.2
CDS-3UTR CCA 90 bp AACGAGAGAGTAGCCAGACTCTCCGCGCATGGAGCCGACGGCACCCACCAGCACCAGACTCTCCGCGCATaGAGCCGACGGCACCCACCA +
Preference number: 4 (lower is better)
Translates to: NERVARLSAHGADGTHQHQTLRA*SRRHPP
Trigger: TGGTGGGTGCCGTCGGCTCCATGCGCGGAGAGTCTG...GTGCTGGTGGGTGCCGTCGGCTCCATGCGCGGAGAGTCTGGCTACTCTCTCGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419349.2
CDS-3UTR CCA 90 bp CAGGAGAGAAGGGCAGCTAGAACCCGGGGTCAAGAGGAGGAGAGAAACGTTCTAAAGGCATACACCGACTaGGCCGCCGCCGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: QERRAARTRGQEEERNVLKAYTD*AAAAAA
Trigger: GGCGGCGGCGGCGGCGGCCCAGTCGGTGTATGCCTT...TAGAACGTTTCTCTCCTCCTCTTGACCCCGGGTTCTAGCTGCCCTTCTCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419349.2
ENST00000496791.2
CDS-3UTR TCA 90 bp CCTCCATGCGCAATCCCAAGGGCGGAGAGGAATTTCAGCAGCTACGAGCAACAGTCCGCCCGGCGCACCTaGTGCCCAAACTGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: PPCAIPRAERNFSSYEQQSARRT*CPNWLH
Trigger: GTGCAACCAGTTTGGGCATCAGGTGCGCCGGGCGGA...CTGTTGCTCGTAGCTGCTGAAATTCCTCTCCGCCCTTGGGATTGCGCATGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419349.2
CDS-3UTR GCA 90 bp GGCGTTCTCCTACAGGAGAGAAGGGCAGCTAGAACCCGGGGTCAAGAGGAGGAGGGATTTTGCCCTCCATaGGCAATCCCAAGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: GVLLQERRAARTRGQEEEGFCPP*AIPRAE
Trigger: CTCCGCCCTTGGGATTGCGCATGGAGGGCAAAATCC...CTCCTCCTCTTGACCCCGGGTTCTAGCTGCCCTTCTCTCCTGTAGGAGAACGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419349.2
ENST00000496791.2
CDS-3UTR GCA 90 bp CTCTTCGTTCTTGGCGTTCTCCTACAGGAGAGAAGGGCAGCTAGAACCCGGGGTGGATTTTGCCCTCCATaGGCAATCCCAAGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: LFVLGVLLQERRAARTRGGFCPP*AIPRAE
Trigger: CTCCGCCCTTGGGATTGCGCATGGAGGGCAAAATCC...ACCCCGGGTTCTAGCTGCCCTTCTCTCCTGTAGGAGAACGCCAAGAACGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419349.2
ENST00000496791.2
CDS-3UTR GCA 90 bp CGGGATTTTGCCCTCCATGCGCAATCCCAAGGGCGGAGAGGAATTTCAGCAGCTGAGTCACCGGGATTTTaGCCTCCATGCGCAATCCCA +
Preference number: 4 (lower is better)
Translates to: RDFALHAQSQGRRGISAAESPGF*PPCAIP
Trigger: TGGGATTGCGCATGGAGGGCAAAATCCCGGTGACTC...AGCTGCTGAAATTCCTCTCCGCCCTTGGGATTGCGCATGGAGGGCAAAATCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419349.2
CDS-3UTR GCA 90 bp CTCTTCGTTCTTGGCGTTCTCCTACAGGAGAGAAGGGCAGCTAGAACCCGGGGTGAGTCACCGGGATTTTaGCCTCCATGCGCAATCCCA +
Preference number: 4 (lower is better)
Translates to: LFVLGVLLQERRAARTRGESPGF*PPCAIP
Trigger: TGGGATTGCGCATGGAGGGCAAAATCCCGGTGACTC...ACCCCGGGTTCTAGCTGCCCTTCTCTCCTGTAGGAGAACGCCAAGAACGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419349.2
ENST00000496791.2
CDS-3UTR TCA 90 bp GGCGTTCTCCTACAGGAGAGAAGGGCAGCTAGAACCCGGGGTCAAGAGGAGGAGAAGGGAGATTTTCTATaGGTCACCGGGATTTTGCCC +
Preference number: 4 (lower is better)
Translates to: GVLLQERRAARTRGQEEEKGDFL*VTGILP
Trigger: GGGCAAAATCCCGGTGACTCATAGAAAATCTCCCTT...CTCCTCCTCTTGACCCCGGGTTCTAGCTGCCCTTCTCTCCTGTAGGAGAACGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000419349.2
ENST00000496791.2
CDS-3UTR TCA 90 bp GCAATCCCAAGGGCGGAGAGGAATTTCAGCAGCTACGAGCAACAGAAAGGAAACAAGGGAGATTTTCTATaGGTCACCGGGATTTTGCCC +
Preference number: 4 (lower is better)
Translates to: AIPRAERNFSSYEQQKGNKGDFL*VTGILP
Trigger: GGGCAAAATCCCGGTGACTCATAGAAAATCTCCCTT...GTTTCCTTTCTGTTGCTCGTAGCTGCTGAAATTCCTCTCCGCCCTTGGGATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419349.2