RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000166123

Ensembl transcript IDs: ENST00000340124.9, ENST00000440783.2, ENST00000562132.5, ENST00000562801.5, ENST00000569193.1

Found 395 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGCAACATCCTGCCCAGTCCACGTGCTACTGCGCTCCCGGCGCCTaGCTCCAGGCCACCGGGCGGACCCTTTCTCAGCCCCAGGGGCCT +
Preference number: 1 (lower is better)
Translates to: VQHPAQSTCYCAPGA*LQATGRTLSQPQGP
Trigger: AGGCCCCTGGGGCTGAGAAAGGGTCCGCCCGGTGGCCTGGAGGCAGGCGCCGGGAGCGCAGTAGCACGTGGACTGGGCAGGATGTTGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR GCA 90 bp CGTGGCCGCAGCCCCCAGCATCTACCCCAAGCTAGTGCAACATCCTaGCCAGTCCACGTGCTACTGCGCTCCCGGCGCCTGCCTCCAGGC +
Preference number: 1 (lower is better)
Translates to: RGRSPQHLPQASATS*PVHVLLRSRRLPPG
Trigger: GCCTGGAGGCAGGCGCCGGGAGCGCAGTAGCACGTGGACTGGGCAGGATGTTGCACTAGCTTGGGGTAGATGCTGGGGGCTGCGGCCACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR CCA 90 bp GTGAGGGAGGCGAGGGCTAAGCCCGTAGCACCGCAGCCTCGAGTGTaGTCGGCCCGCCCAGGGCTGCTAATGGCAGAGAAGCCGCATGCT +
Preference number: 1 (lower is better)
Translates to: VREARAKPVAPQPRV*SARPGLLMAEKPHA
Trigger: AGCATGCGGCTTCTCTGCCATTAGCAGCCCTGGGCGGGCCGACCACACTCGAGGCTGCGGTGCTACGGGCTTAGCCCTCGCCTCCCTCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR GCA 90 bp ATCTACCCCAAGCTAGTGCAACATCCTGCCCAGTCCACGTGCTACTaGGCTCCCGGCGCCTGCCTCCAGGCCACCGGGCGGACCCTTTCT +
Preference number: 1 (lower is better)
Translates to: IYPKLVQHPAQSTCY*APGACLQATGRTLS
Trigger: AGAAAGGGTCCGCCCGGTGGCCTGGAGGCAGGCGCCGGGAGCGCAGTAGCACGTGGACTGGGCAGGATGTTGCACTAGCTTGGGGTAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR CCA 90 bp ACCCCTCATTCCCAAAGCCCGCCGGGCGCACAGAATTCTCAGGCCTaGCTGCGTTGCTGGGAAGCGGAGGCCCAGTTCCTCCTGCAGCCT +
Preference number: 1 (lower is better)
Translates to: TPHSQSPPGAQNSQA*LRCWEAEAQFLLQP
Trigger: AGGCTGCAGGAGGAACTGGGCCTCCGCTTCCCAGCAACGCAGCCAGGCCTGAGAATTCTGTGCGCCCGGCGGGCTTTGGGAATGAGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR CCA 90 bp TCACAGGCTCGGTCAGGGGAGAACAGGCACCGGTCACCCGCGGGATaGGTCCACACCATTCCAGCGGCTCTCTCCACGGAAGTGGGACAC +
Preference number: 1 (lower is better)
Translates to: SQARSGENRHRSPAG*VHTIPAALSTEVGH
Trigger: GTGTCCCACTTCCGTGGAGAGAGCCGCTGGAATGGTGTGGACCCATCCCGCGGGTGACCGGTGCCTGTTCTCCCCTGACCGAGCCTGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR CCA 90 bp GTGGTCGGCCCGCCCAGGGCTGCTAATGGCAGAGAAGCCGCATGCTaGGGGATGGCACCCTCCTGTACTGGGAGAAGCCTGATGCCACAG +
Preference number: 1 (lower is better)
Translates to: VVGPPRAANGREAAC*GMAPSCTGRSLMPQ
Trigger: CTGTGGCATCAGGCTTCTCCCAGTACAGGAGGGTGCCATCCCCCAGCATGCGGCTTCTCTGCCATTAGCAGCCCTGGGCGGGCCGACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR GCA 90 bp AGTGTGGTCGGCCCGCCCAGGGCTGCTAATGGCAGAGAAGCCGCATaGTGGGGGATGGCACCCTCCTGTACTGGGAGAAGCCTGATGCCA +
Preference number: 1 (lower is better)
Translates to: SVVGPPRAANGREAA*WGMAPSCTGRSLMP
Trigger: TGGCATCAGGCTTCTCCCAGTACAGGAGGGTGCCATCCCCCAGCATGCGGCTTCTCTGCCATTAGCAGCCCTGGGCGGGCCGACCACACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR GCA 90 bp CACTCCACACACACCAGAACAGGAATAGCCAGGCAAGCCTCTGGGTaGCCGGTGATGCACTGTCTGAGGCACAGCCCAGCACGTGCTTCC +
Preference number: 1 (lower is better)
Translates to: HSTHTRTGIARQASG*PVMHCLRHSPARAS
Trigger: GGAAGCACGTGCTGGGCTGTGCCTCAGACAGTGCATCACCGGGCACCCAGAGGCTTGCCTGGCTATTCCTGTTCTGGTGTGTGTGGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR CCA 90 bp CCAACACTCCACACACACCAGAACAGGAATAGCCAGGCAAGCCTCTaGGTGCCCGGTGATGCACTGTCTGAGGCACAGCCCAGCACGTGC +
Preference number: 1 (lower is better)
Translates to: PTLHTHQNRNSQASL*VPGDALSEAQPSTC
Trigger: GCACGTGCTGGGCTGTGCCTCAGACAGTGCATCACCGGGCACCCAGAGGCTTGCCTGGCTATTCCTGTTCTGGTGTGTGTGGAGTGTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR CCA 90 bp ACCGACCAGATTCAGCTCGCCACCATTCAAGAAAGGACAGGGCCTTaGCTGCTCGGCAGGTCCCGGGGATTGCCCTTGTGGGGAGGATAT +
Preference number: 1 (lower is better)
Translates to: TDQIQLATIQERTGP*LLGRSRGLPLWGGY
Trigger: ATATCCTCCCCACAAGGGCAATCCCCGGGACCTGCCGAGCAGCCAAGGCCCTGTCCTTTCTTGAATGGTGGCGAGCTGAATCTGGTCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR TCA 90 bp TCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACTaGAATTCAGGGAGACCTCTCAGACGGGGTTCCAGCCTACGCATG +
Preference number: 1 (lower is better)
Translates to: SLHGSGTLPGCTMCH*NSGRPLRRGSSLRM
Trigger: CATGCGTAGGCTGGAACCCCGTCTGAGAGGTCTCCCTGAATTTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR GCA 90 bp TGGGTCCACACCATTCCAGCGGCTCTCTCCACGGAAGTGGGACACTaGCGGGCTGCACTATGTGTCACTGAAATTCAGGGAGACCTCTCA +
Preference number: 1 (lower is better)
Translates to: WVHTIPAALSTEVGH*RAALCVTEIQGDLS
Trigger: TGAGAGGTCTCCCTGAATTTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGCTGGAATGGTGTGGACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR TCA 90 bp CTGGGAGGGGAGCCGGAAGCTAACATGAAGGCAAAACACTCTGCATaGAAGCACGGCAATGAACCTCCAACCACGACTGACTCCTCCACG +
Preference number: 1 (lower is better)
Translates to: LGGEPEANMKAKHSA*KHGNEPPTTTDSST
Trigger: CGTGGAGGAGTCAGTCGTGGTTGGAGGTTCATTGCCGTGCTTTCATGCAGAGTGTTTTGCCTTCATGTTAGCTTCCGGCTCCCCTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR GCA 90 bp GGAAATCACAGCATAGAGGCTGCTGCCTCACTCCTCGGCCTCTTCTaGTTTCTCTCCAGCTTCTCCAATCCCATTTTGGGACATGCGGGG +
Preference number: 1 (lower is better)
Translates to: GNHSIEAAASLLGLF*FLSSFSNPILGHAG
Trigger: CCCCGCATGTCCCAAAATGGGATTGGAGAAGCTGGAGAGAAAGCAGAAGAGGCCGAGGAGTGAGGCAGCAGCCTCTATGCTGTGATTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR CCA 90 bp GTAAGGACAGTTGGGAGTTTCTGTTTCCTCTGCACGGACCCGGTGTaGAAATCACAGCATAGAGGCTGCTGCCTCACTCCTCGGCCTCTT +
Preference number: 1 (lower is better)
Translates to: VRTVGSFCFLCTDPV*KSQHRGCCLTPRPL
Trigger: AAGAGGCCGAGGAGTGAGGCAGCAGCCTCTATGCTGTGATTTCCACACCGGGTCCGTGCAGAGGAAACAGAAACTCCCAACTGTCCTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR GCA 90 bp GATGCACTGTCTGAGGCACAGCCCAGCACGTGCTTCCTCAGCACATaGTACACACACAGATCTGGACGAATGACAGAAACTTCACAGATG +
Preference number: 1 (lower is better)
Translates to: DALSEAQPSTCFLST*YTHRSGRMTETSQM
Trigger: CATCTGTGAAGTTTCTGTCATTCGTCCAGATCTGTGTGTGTAGCATGTGCTGAGGAAGCACGTGCTGGGCTGTGCCTCAGACAGTGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR CCA 90 bp TTCAGAGAACCCTGGTCACACCTGCTGAGCAGGTCCCCTCTACTCTaGTTGCATATAGAATGCTTGTTTGCTCAAAAGAGAGGCGCTCTC +
Preference number: 1 (lower is better)
Translates to: FREPWSHLLSRSPLL*LHIECLFAQKRGAL
Trigger: GAGAGCGCCTCTCTTTTGAGCAAACAAGCATTCTATATGCAACCAGAGTAGAGGGGACCTGCTCAGCAGGTGTGACCAGGGTTCTCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR CCA 90 bp ACAGCCCAGCACGTGCTTCCTCAGCACATGCTACACACACAGATCTaGACGAATGACAGAAACTTCACAGATGTAACTTCCAAGTGCGAC +
Preference number: 1 (lower is better)
Translates to: TAQHVLPQHMLHTQI*TNDRNFTDVTSKCD
Trigger: GTCGCACTTGGAAGTTACATCTGTGAAGTTTCTGTCATTCGTCCAGATCTGTGTGTGTAGCATGTGCTGAGGAAGCACGTGCTGGGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR TCA 90 bp TTTCCAGCAGAGCCATTGTTAAGTACCTCTGTCAGGAGATACCTGTaGGAACCTAGACGGGAAAACAGCCACAGGTTGATCTGCATCTGT +
Preference number: 1 (lower is better)
Translates to: FPAEPLLSTSVRRYL*EPRRENSHRLICIC
Trigger: ACAGATGCAGATCAACCTGTGGCTGTTTTCCCGTCTAGGTTCTCACAGGTATCTCCTGACAGAGGTACTTAACAATGGCTCTGCTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR GCA 90 bp GCTGAGCAGGTCCCCTCTACTCTGGTTGCATATAGAATGCTTGTTTaGTCAAAAGAGAGGCGCTCTCAACATCAAGGCACAAAGAAAGAC +
Preference number: 1 (lower is better)
Translates to: AEQVPSTLVAYRMLV*SKERRSQHQGTKKD
Trigger: GTCTTTCTTTGTGCCTTGATGTTGAGAGCGCCTCTCTTTTGAGCAAACAAGCATTCTATATGCAACCAGAGTAGAGGGGACCTGCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR-3UTR GCA 90 bp GGAGAACAGGCACCGGTCACCCGCGGGATGGGTCCACACCATTCCAGCGGCTCTGTGACCAGCGGCCTCTaGGAGGCCCGAGGCAGAGTC +
Preference number: 2 (lower is better)
Translates to: GEQAPVTRGMGPHHSSGSVTSGL*EARGRV
Trigger: GACTCTGCCTCGGGCCTCGCAGAGGCCGCTGGTCAC...AGAGCCGCTGGAATGGTGTGGACCCATCCCGCGGGTGACCGGTGCCTGTTCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR-3UTR GCA 90 bp AGGATGGGGAAGCTCCCAGTGAGGGAGGCGAGGGCTAAGCCCGTAGCACCGCAGGGCAGAGAAGCCGCATaGTGGGGGATGGCACCCTCC +
Preference number: 2 (lower is better)
Translates to: RMGKLPVREARAKPVAPQGREAA*WGMAPS
Trigger: GGAGGGTGCCATCCCCCAGCATGCGGCTTCTCTGCC...CTGCGGTGCTACGGGCTTAGCCCTCGCCTCCCTCACTGGGAGCTTCCCCATCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR CAA 90 bp TTCCCAAAGCCCGCCGGGCGCACAGAATTCTCAGGCCTGGCTGCGTaGCTGGGAAGCGGAGGCCCAGTTCCTCCTGCAGCCTGGCTCACA +
Preference number: 2 (lower is better)
Translates to: FPKPAGRTEFSGLAA*LGSGGPVPPAAWLT
Trigger: TGTGAGCCAGGCTGCAGGAGGAACTGGGCCTCCGCTTCCCAGCAACGCAGCCAGGCCTGAGAATTCTGTGCGCCCGGCGGGCTTTGGGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR-3UTR TCA 90 bp CCAGGCCACCGGGCGGACCCTTTCTCAGCCCCAGGGGCCTTCCAGGCCCTTCTGAAAATGATGACGAAGTaGCCAGCGGCCTCTGCGAGG +
Preference number: 2 (lower is better)
Translates to: PGHRADPFSAPGAFQALLKMMTK*PAASAR
Trigger: CCTCGCAGAGGCCGCTGGTCACTTCGTCATCATTTT...CAGAAGGGCCTGGAAGGCCCCTGGGGCTGAGAAAGGGTCCGCCCGGTGGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR-3UTR GCA 90 bp ATTCCAGCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCCAGTCCACGTGCTACTaGGCTCCCGGCGCCTGCCTC +
Preference number: 2 (lower is better)
Translates to: IPAALSTEVGHCRAALCVQSTCY*APGACL
Trigger: GAGGCAGGCGCCGGGAGCGCAGTAGCACGTGGACTG...GACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGCTGGAAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR-3UTR TCA 90 bp TCTCAGACGGGGTTCCAGCCTACGCATGTTCAAGGGAACCCCTCATTCCCAAAGCACAGTGGGGCCCTCTaGCCGTGGCCGCAGCCCCCA +
Preference number: 2 (lower is better)
Translates to: SQTGFQPTHVQGNPSFPKHSGAL*PWPQPP
Trigger: TGGGGGCTGCGGCCACGGTCAGAGGGCCCCACTGTG...CTTTGGGAATGAGGGGTTCCCTTGAACATGCGTAGGCTGGAACCCCGTCTGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR-3UTR CCA 90 bp TCTCAGACGGGGTTCCAGCCTACGCATGTTCAAGGGAACCCCTCATTCCCAAAGACCCACGCCTCACAGTaGGGCCCTCTGACCGTGGCC +
Preference number: 2 (lower is better)
Translates to: SQTGFQPTHVQGNPSFPKTHASQ*GPLTVA
Trigger: GGCCACGGTCAGAGGGCCCCACTGTGAGGCGTGGGT...CTTTGGGAATGAGGGGTTCCCTTGAACATGCGTAGGCTGGAACCCCGTCTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR CAA 90 bp AACCGACCAGATTCAGCTCGCCACCATTCAAGAAAGGACAGGGCCTaGGCTGCTCGGCAGGTCCCGGGGATTGCCCTTGTGGGGAGGATA +
Preference number: 2 (lower is better)
Translates to: NRPDSARHHSRKDRA*AARQVPGIALVGRI
Trigger: TATCCTCCCCACAAGGGCAATCCCCGGGACCTGCCGAGCAGCCAAGGCCCTGTCCTTTCTTGAATGGTGGCGAGCTGAATCTGGTCGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR-3UTR GCA 90 bp AGGAATAGCCAGGCAAGCCTCTGGGTGCCCGGTGATGCACTGTCTGAGGCACAGCCACGGCAGCCAAGCTaGCAGGCACTTTTACCACCT +
Preference number: 2 (lower is better)
Translates to: RNSQASLWVPGDALSEAQPRQPS*QALLPP
Trigger: AGGTGGTAAAAGTGCCTGGCAGCTTGGCTGCCGTGG...CTGTGCCTCAGACAGTGCATCACCGGGCACCCAGAGGCTTGCCTGGCTATTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR-3UTR GCA 90 bp GCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACTGAAGCTAGTGCAACATCCTaGCCAGTCCACGTGCTACTG +
Preference number: 2 (lower is better)
Translates to: AALSTEVGHCRAALCVTEASATS*PVHVLL
Trigger: CAGTAGCACGTGGACTGGGCAGGATGTTGCACTAGC...TTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR-3UTR CCA 90 bp AGGAATAGCCAGGCAAGCCTCTGGGTGCCCGGTGATGCACTGTCTGAGGCACAGTGCACGGACCCGGTGTaGAAATCACAGCATAGAGGC +
Preference number: 2 (lower is better)
Translates to: RNSQASLWVPGDALSEAQCTDPV*KSQHRG
Trigger: GCCTCTATGCTGTGATTTCCACACCGGGTCCGTGCA...CTGTGCCTCAGACAGTGCATCACCGGGCACCCAGAGGCTTGCCTGGCTATTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR-3UTR CCA 90 bp GGAGAACAGGCACCGGTCACCCGCGGGATGGGTCCACACCATTCCAGCGGCTCTAGGTCCCCTCTACTCTaGTTGCATATAGAATGCTTG +
Preference number: 2 (lower is better)
Translates to: GEQAPVTRGMGPHHSSGSRSPLL*LHIECL
Trigger: CAAGCATTCTATATGCAACCAGAGTAGAGGGGACCT...AGAGCCGCTGGAATGGTGTGGACCCATCCCGCGGGTGACCGGTGCCTGTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR-3UTR CCA 90 bp GCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACTGAAAGATTCAGAGAACCCTaGTCACACCTGCTGAGCAGG +
Preference number: 2 (lower is better)
Translates to: AALSTEVGHCRAALCVTERFREP*SHLLSR
Trigger: CCTGCTCAGCAGGTGTGACCAGGGTTCTCTGAATCT...TTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR-3UTR TCA 90 bp AGGAATAGCCAGGCAAGCCTCTGGGTGCCCGGTGATGCACTGTCTGAGGCACAGCACAGATCATGGTGGTaGGTTTGGATTTCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: RNSQASLWVPGDALSEAQHRSWW*VWISSP
Trigger: AGGGCTGGAAATCCAAACTCACCACCATGATCTGTG...CTGTGCCTCAGACAGTGCATCACCGGGCACCCAGAGGCTTGCCTGGCTATTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR-3UTR CCA 90 bp GACACTGCCGGGCTGCACTATGTGTCACTGAAATTCAGGGAGACCTCTCAGACGCAGAATTCTCAGGCCTaGCTGCGTTGCTGGGAAGCG +
Preference number: 2 (lower is better)
Translates to: DTAGLHYVSLKFRETSQTQNSQA*LRCWEA
Trigger: CGCTTCCCAGCAACGCAGCCAGGCCTGAGAATTCTG...CGTCTGAGAGGTCTCCCTGAATTTCAGTGACACATAGTGCAGCCCGGCAGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR-3UTR TCA 90 bp TCTCAGACGGGGTTCCAGCCTACGCATGTTCAAGGGAACCCCTCATTCCCAAAGAAAATGATGACGAAGTaGCCAGCGGCCTCTGCGAGG +
Preference number: 2 (lower is better)
Translates to: SQTGFQPTHVQGNPSFPKKMMTK*PAASAR
Trigger: CCTCGCAGAGGCCGCTGGTCACTTCGTCATCATTTT...CTTTGGGAATGAGGGGTTCCCTTGAACATGCGTAGGCTGGAACCCCGTCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR-3UTR TCA 90 bp GCTAATGGCAGAGAAGCCGCATGCTGGGGGATGGCACCCTCCTGTACTGGGAGATGCACTATGTGTCACTaGAATTCAGGGAGACCTCTC +
Preference number: 2 (lower is better)
Translates to: ANGREAACWGMAPSCTGRCTMCH*NSGRPL
Trigger: GAGAGGTCTCCCTGAATTTCAGTGACACATAGTGCA...TCTCCCAGTACAGGAGGGTGCCATCCCCCAGCATGCGGCTTCTCTGCCATTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR-3UTR TCA 90 bp GCTAATGGCAGAGAAGCCGCATGCTGGGGGATGGCACCCTCCTGTACTGGGAGAAGCCGGAAGCTAACATaGAGGCAAAACACTCTGCAT +
Preference number: 2 (lower is better)
Translates to: ANGREAACWGMAPSCTGRSRKLT*RQNTLH
Trigger: ATGCAGAGTGTTTTGCCTTCATGTTAGCTTCCGGCT...TCTCCCAGTACAGGAGGGTGCCATCCCCCAGCATGCGGCTTCTCTGCCATTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR-3UTR GCA 90 bp GCTAGGAAACCGACCAGATTCAGCTCGCCACCATTCAAGAAAGGACAGGGCCTTACGGAAGTGGGACACTaGCGGGCTGCACTATGTGTC +
Preference number: 2 (lower is better)
Translates to: ARKPTRFSSPPFKKGQGLTEVGH*RAALCV
Trigger: GACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGT...AAGGCCCTGTCCTTTCTTGAATGGTGGCGAGCTGAATCTGGTCGGTTTCCTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR-3UTR CCA 90 bp AGGAATAGCCAGGCAAGCCTCTGGGTGCCCGGTGATGCACTGTCTGAGGCACAGGTGGGTAAGGACAGTTaGGAGTTTCTGTTTCCTCTG +
Preference number: 2 (lower is better)
Translates to: RNSQASLWVPGDALSEAQVGKDS*EFLFPL
Trigger: CAGAGGAAACAGAAACTCCCAACTGTCCTTACCCAC...CTGTGCCTCAGACAGTGCATCACCGGGCACCCAGAGGCTTGCCTGGCTATTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR-3UTR GCA 90 bp TCTCAGACGGGGTTCCAGCCTACGCATGTTCAAGGGAACCCCTCATTCCCAAAGGTTCAAAGGACCGGATaGTTCACACCGCTAAGGGCT +
Preference number: 2 (lower is better)
Translates to: SQTGFQPTHVQGNPSFPKVQRTG*FTPLRA
Trigger: AGCCCTTAGCGGTGTGAAGCATCCGGTCCTTTGAAC...CTTTGGGAATGAGGGGTTCCCTTGAACATGCGTAGGCTGGAACCCCGTCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR-3UTR CCA 90 bp AGGAATAGCCAGGCAAGCCTCTGGGTGCCCGGTGATGCACTGTCTGAGGCACAGCTACACACACAGATCTaGACGAATGACAGAAACTTC +
Preference number: 2 (lower is better)
Translates to: RNSQASLWVPGDALSEAQLHTQI*TNDRNF
Trigger: GAAGTTTCTGTCATTCGTCCAGATCTGTGTGTGTAG...CTGTGCCTCAGACAGTGCATCACCGGGCACCCAGAGGCTTGCCTGGCTATTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR-3UTR GCA 90 bp TTTGAGATTGTGGCTACTTTCTTCATAGGGGCTGTGATGTCGGTGGGTAAGGACCAGCATAGAGGCTGCTaGCTCACTCCTCGGCCTCTT +
Preference number: 2 (lower is better)
Translates to: FEIVATFFIGAVMSVGKDQHRGC*LTPRPL
Trigger: AAGAGGCCGAGGAGTGAGGCAGCAGCCTCTATGCTG...GTCCTTACCCACCGACATCACAGCCCCTATGAAGAAAGTAGCCACAATCTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR CAA 90 bp AGAGAACCCTGGTCACACCTGCTGAGCAGGTCCCCTCTACTCTGGTaGCATATAGAATGCTTGTTTGCTCAAAAGAGAGGCGCTCTCAAC +
Preference number: 2 (lower is better)
Translates to: REPWSHLLSRSPLLW*HIECLFAQKRGALN
Trigger: GTTGAGAGCGCCTCTCTTTTGAGCAAACAAGCATTCTATATGCAACCAGAGTAGAGGGGACCTGCTCAGCAGGTGTGACCAGGGTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR-3UTR TCA 90 bp ATTCCAGCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCGTTGTAAACCCCAAATaGACTTTCCAGAAGCAAAAA +
Preference number: 2 (lower is better)
Translates to: IPAALSTEVGHCRAALCVVVNPK*TFQKQK
Trigger: TTTTTGCTTCTGGAAAGTTCATTTGGGGTTTACAAC...GACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGCTGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR-3UTR CCA 90 bp GATTTCCAGCCCTCACCACGGTTAAGTCACACATTTCCCGACACCTGCTCATTTAGATTCAGAGAACCCTaGTCACACCTGCTGAGCAGG +
Preference number: 2 (lower is better)
Translates to: DFQPSPRLSHTFPDTCSFRFREP*SHLLSR
Trigger: CCTGCTCAGCAGGTGTGACCAGGGTTCTCTGAATCT...AAATGAGCAGGTGTCGGGAAATGTGTGACTTAACCGTGGTGAGGGCTGGAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR-3UTR GCA 90 bp GCTAATGGCAGAGAAGCCGCATGCTGGGGGATGGCACCCTCCTGTACTGGGAGATGGTTGCATATAGAATaGTTGTTTGCTCAAAAGAGA +
Preference number: 2 (lower is better)
Translates to: ANGREAACWGMAPSCTGRWLHIE*LFAQKR
Trigger: TCTCTTTTGAGCAAACAAGCATTCTATATGCAACCA...TCTCCCAGTACAGGAGGGTGCCATCCCCCAGCATGCGGCTTCTCTGCCATTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR CAA 90 bp CACCTGCTGAGCAGGTCCCCTCTACTCTGGTTGCATATAGAATGCTaGTTTGCTCAAAAGAGAGGCGCTCTCAACATCAAGGCACAAAGA +
Preference number: 2 (lower is better)
Translates to: HLLSRSPLLWLHIEC*FAQKRGALNIKAQR
Trigger: TCTTTGTGCCTTGATGTTGAGAGCGCCTCTCTTTTGAGCAAACAAGCATTCTATATGCAACCAGAGTAGAGGGGACCTGCTCAGCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR-3UTR GCA 90 bp TCTCAGACGGGGTTCCAGCCTACGCATGTTCAAGGGAACCCCTCATTCCCAAAGTATAGAATGCTTGTTTaGTCAAAAGAGAGGCGCTCT +
Preference number: 2 (lower is better)
Translates to: SQTGFQPTHVQGNPSFPKYRMLV*SKERRS
Trigger: AGAGCGCCTCTCTTTTGAGCAAACAAGCATTCTATA...CTTTGGGAATGAGGGGTTCCCTTGAACATGCGTAGGCTGGAACCCCGTCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR-3UTR CCA 90 bp GATTTCCAGCCCTCACCACGGTTAAGTCACACATTTCCCGACACCTGCTCATTTAGGTCCCCTCTACTCTaGTTGCATATAGAATGCTTG +
Preference number: 2 (lower is better)
Translates to: DFQPSPRLSHTFPDTCSFRSPLL*LHIECL
Trigger: CAAGCATTCTATATGCAACCAGAGTAGAGGGGACCT...AAATGAGCAGGTGTCGGGAAATGTGTGACTTAACCGTGGTGAGGGCTGGAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR GCA 72 bp CCTGCCCAGTCCACGTGCTACTGCGCTCCCGGCGCCTaGCTCCAGGCCACCGGGCGGACCCTTTCTCAGCCC +
Preference number: 3 (lower is better)
Translates to: PAQSTCYCAPGA*LQATGRTLSQP
Trigger: GGGCTGAGAAAGGGTCCGCCCGGTGGCCTGGAGGCAGGCGCCGGGAGCGCAGTAGCACGTGGACTGGGCAGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR GCA 72 bp AAGCTAGTGCAACATCCTGCCCAGTCCACGTGCTACTaGGCTCCCGGCGCCTGCCTCCAGGCCACCGGGCGG +
Preference number: 3 (lower is better)
Translates to: KLVQHPAQSTCY*APGACLQATGR
Trigger: CCGCCCGGTGGCCTGGAGGCAGGCGCCGGGAGCGCAGTAGCACGTGGACTGGGCAGGATGTTGCACTAGCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR CCA 72 bp CCGGGCGCACAGAATTCTCAGGCCTGGCTGCGTTGCTaGGAAGCGGAGGCCCAGTTCCTCCTGCAGCCTGGC +
Preference number: 3 (lower is better)
Translates to: PGAQNSQAWLRC*EAEAQFLLQPG
Trigger: GCCAGGCTGCAGGAGGAACTGGGCCTCCGCTTCCCAGCAACGCAGCCAGGCCTGAGAATTCTGTGCGCCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR CCA 72 bp GCGAGGGCTAAGCCCGTAGCACCGCAGCCTCGAGTGTaGTCGGCCCGCCCAGGGCTGCTAATGGCAGAGAAG +
Preference number: 3 (lower is better)
Translates to: ARAKPVAPQPRV*SARPGLLMAEK
Trigger: CTTCTCTGCCATTAGCAGCCCTGGGCGGGCCGACCACACTCGAGGCTGCGGTGCTACGGGCTTAGCCCTCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR GCA 72 bp TACCCCAAGCTAGTGCAACATCCTGCCCAGTCCACGTaGTACTGCGCTCCCGGCGCCTGCCTCCAGGCCACC +
Preference number: 3 (lower is better)
Translates to: YPKLVQHPAQST*YCAPGACLQAT
Trigger: GGTGGCCTGGAGGCAGGCGCCGGGAGCGCAGTAGCACGTGGACTGGGCAGGATGTTGCACTAGCTTGGGGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR GCA 72 bp GGCCCGCCCAGGGCTGCTAATGGCAGAGAAGCCGCATaGTGGGGGATGGCACCCTCCTGTACTGGGAGAAGC +
Preference number: 3 (lower is better)
Translates to: GPPRAANGREAA*WGMAPSCTGRS
Trigger: GCTTCTCCCAGTACAGGAGGGTGCCATCCCCCAGCATGCGGCTTCTCTGCCATTAGCAGCCCTGGGCGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR GCA 72 bp AGCCCCCAGCATCTACCCCAAGCTAGTGCAACATCCTaGCCAGTCCACGTGCTACTGCGCTCCCGGCGCCTG +
Preference number: 3 (lower is better)
Translates to: SPQHLPQASATS*PVHVLLRSRRL
Trigger: CAGGCGCCGGGAGCGCAGTAGCACGTGGACTGGGCAGGATGTTGCACTAGCTTGGGGTAGATGCTGGGGGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR CCA 72 bp CCGCCCAGGGCTGCTAATGGCAGAGAAGCCGCATGCTaGGGGATGGCACCCTCCTGTACTGGGAGAAGCCTG +
Preference number: 3 (lower is better)
Translates to: PPRAANGREAAC*GMAPSCTGRSL
Trigger: CAGGCTTCTCCCAGTACAGGAGGGTGCCATCCCCCAGCATGCGGCTTCTCTGCCATTAGCAGCCCTGGGCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR GCA 72 bp CACACCAGAACAGGAATAGCCAGGCAAGCCTCTGGGTaGCCGGTGATGCACTGTCTGAGGCACAGCCCAGCA +
Preference number: 3 (lower is better)
Translates to: HTRTGIARQASG*PVMHCLRHSPA
Trigger: TGCTGGGCTGTGCCTCAGACAGTGCATCACCGGGCACCCAGAGGCTTGCCTGGCTATTCCTGTTCTGGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR CCA 72 bp ATTCAGCTCGCCACCATTCAAGAAAGGACAGGGCCTTaGCTGCTCGGCAGGTCCCGGGGATTGCCCTTGTGG +
Preference number: 3 (lower is better)
Translates to: IQLATIQERTGP*LLGRSRGLPLW
Trigger: CCACAAGGGCAATCCCCGGGACCTGCCGAGCAGCCAAGGCCCTGTCCTTTCTTGAATGGTGGCGAGCTGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR CCA 72 bp CACACACACCAGAACAGGAATAGCCAGGCAAGCCTCTaGGTGCCCGGTGATGCACTGTCTGAGGCACAGCCC +
Preference number: 3 (lower is better)
Translates to: HTHQNRNSQASL*VPGDALSEAQP
Trigger: GGGCTGTGCCTCAGACAGTGCATCACCGGGCACCCAGAGGCTTGCCTGGCTATTCCTGTTCTGGTGTGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR TCA 72 bp AAGAAAGACGTCTCCAGGGGCAAAATGATGACGAAGTaGCCAGCGGCCTCTGCGAGGCCCGAGGCAGAGTCA +
Preference number: 3 (lower is better)
Translates to: KKDVSRGKMMTK*PAASARPEAES
Trigger: TGACTCTGCCTCGGGCCTCGCAGAGGCCGCTGGTCACTTCGTCATCATTTTGCCCCTGGAGACGTCTTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR TCA 72 bp GGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACTaGAATTCAGGGAGACCTCTCAGACGGGGTTCCAGC +
Preference number: 3 (lower is better)
Translates to: GSGTLPGCTMCH*NSGRPLRRGSS
Trigger: GCTGGAACCCCGTCTGAGAGGTCTCCCTGAATTTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR-3UTR CAA 90 bp GCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACTGAAATCATGGTGGTGAGTTaGGATTTCCAGCCCTCACCA +
Preference number: 3 (lower is better)
Translates to: AALSTEVGHCRAALCVTEIMVVS*DFQPSP
Trigger: TGGTGAGGGCTGGAAATCCAAACTCACCACCATGAT...TTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR GCA 72 bp ACCATTCCAGCGGCTCTCTCCACGGAAGTGGGACACTaGCGGGCTGCACTATGTGTCACTGAAATTCAGGGA +
Preference number: 3 (lower is better)
Translates to: TIPAALSTEVGH*RAALCVTEIQG
Trigger: TCCCTGAATTTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGCTGGAATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR GCA 72 bp CGGTGGGTAAGGACAGTTGGGAGTTTCTGTTTCCTCTaGACGGACCCGGTGTGGAAATCACAGCATAGAGGC +
Preference number: 3 (lower is better)
Translates to: RWVRTVGSFCFL*TDPVWKSQHRG
Trigger: GCCTCTATGCTGTGATTTCCACACCGGGTCCGTGCAGAGGAAACAGAAACTCCCAACTGTCCTTACCCACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR-3UTR CAA 90 bp GCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACTGAATCCCCTCTACTCTGGTaGCATATAGAATGCTTGTTT +
Preference number: 3 (lower is better)
Translates to: AALSTEVGHCRAALCVTESPLLW*HIECLF
Trigger: AAACAAGCATTCTATATGCAACCAGAGTAGAGGGGA...TTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR TCA 72 bp ACCTGTGAGAACCTAGACGGGAAAACAGCCACAGGTTaGTCTGCATCTGTTCCTCCCCAACACTCCACACAC +
Preference number: 3 (lower is better)
Translates to: TCENLDGKTATG*SASVPPQHSTH
Trigger: GTGTGTGGAGTGTTGGGGAGGAACAGATGCAGATCAACCTGTGGCTGTTTTCCCGTCTAGGTTCTCACAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR GCA 72 bp AGGGGCCTTCCAGGCCCTTCTGTTCAAAGGACCGGATaGTTCACACCGCTAAGGGCTTTATTTCACAGATCA +
Preference number: 3 (lower is better)
Translates to: RGLPGPSVQRTG*FTPLRALFHRS
Trigger: TGATCTGTGAAATAAAGCCCTTAGCGGTGTGAAGCATCCGGTCCTTTGAACAGAAGGGCCTGGAAGGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR GCA 72 bp TCTGAGGCACAGCCCAGCACGTGCTTCCTCAGCACATaGTACACACACAGATCTGGACGAATGACAGAAACT +
Preference number: 3 (lower is better)
Translates to: SEAQPSTCFLST*YTHRSGRMTET
Trigger: AGTTTCTGTCATTCGTCCAGATCTGTGTGTGTAGCATGTGCTGAGGAAGCACGTGCTGGGCTGTGCCTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR TCA 72 bp GAGCCGGAAGCTAACATGAAGGCAAAACACTCTGCATaGAAGCACGGCAATGAACCTCCAACCACGACTGAC +
Preference number: 3 (lower is better)
Translates to: EPEANMKAKHSA*KHGNEPPTTTD
Trigger: GTCAGTCGTGGTTGGAGGTTCATTGCCGTGCTTTCATGCAGAGTGTTTTGCCTTCATGTTAGCTTCCGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR GCA 72 bp CCAAGTGCGACCTCAAATGACAACTTTCTCAGGTGGTaGCTGGATAGGAAAGGCACCGGAACAGAATCTGTA +
Preference number: 3 (lower is better)
Translates to: PSATSNDNFLRW*LDRKGTGTESV
Trigger: TACAGATTCTGTTCCGGTGCCTTTCCTATCCAGGCACCACCTGAGAAAGTTGTCATTTGAGGTCGCACTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR CCA 72 bp CCCTGGTCACACCTGCTGAGCAGGTCCCCTCTACTCTaGTTGCATATAGAATGCTTGTTTGCTCAAAAGAGA +
Preference number: 3 (lower is better)
Translates to: PWSHLLSRSPLL*LHIECLFAQKR
Trigger: TCTCTTTTGAGCAAACAAGCATTCTATATGCAACCAGAGTAGAGGGGACCTGCTCAGCAGGTGTGACCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR CCA 72 bp TCCAGAAGCAAAAACAATAACAGATTCAGAGAACCCTaGTCACACCTGCTGAGCAGGTCCCCTCTACTCTGG +
Preference number: 3 (lower is better)
Translates to: SRSKNNNRFREP*SHLLSRSPLLW
Trigger: CCAGAGTAGAGGGGACCTGCTCAGCAGGTGTGACCAGGGTTCTCTGAATCTGTTATTGTTTTTGCTTCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR-3UTR CAA 90 bp CTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACTGAAATTCAGTTGCATATAGAATGCTaGTTTGCTCAAAAGAGAGGC +
Preference number: 3 (lower is better)
Translates to: LSTEVGHCRAALCVTEIQLHIEC*FAQKRG
Trigger: GCCTCTCTTTTGAGCAAACAAGCATTCTATATGCAA...CTGAATTTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR TCA 72 bp GAGCCATTGTTAAGTACCTCTGTCAGGAGATACCTGTaGGAACCTAGACGGGAAAACAGCCACAGGTTGATC +
Preference number: 3 (lower is better)
Translates to: EPLLSTSVRRYL*EPRRENSHRLI
Trigger: GATCAACCTGTGGCTGTTTTCCCGTCTAGGTTCTCACAGGTATCTCCTGACAGAGGTACTTAACAATGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR CCA 72 bp CACGTGCTTCCTCAGCACATGCTACACACACAGATCTaGACGAATGACAGAAACTTCACAGATGTAACTTCC +
Preference number: 3 (lower is better)
Translates to: HVLPQHMLHTQI*TNDRNFTDVTS
Trigger: GGAAGTTACATCTGTGAAGTTTCTGTCATTCGTCCAGATCTGTGTGTGTAGCATGTGCTGAGGAAGCACGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR-3UTR CAA 90 bp GATTTCCAGCCCTCACCACGGTTAAGTCACACATTTCCCGACACCTGCTCATTTTTGCATATAGAATGCTaGTTTGCTCAAAAGAGAGGC +
Preference number: 3 (lower is better)
Translates to: DFQPSPRLSHTFPDTCSFLHIEC*FAQKRG
Trigger: GCCTCTCTTTTGAGCAAACAAGCATTCTATATGCAA...AAATGAGCAGGTGTCGGGAAATGTGTGACTTAACCGTGGTGAGGGCTGGAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp GCCTCCAGGCCACCGGGCGGACCCTTTCTCAGCCCCAGGGGCCTTCCAGGCCCTTGGGGGTGGACGTCGTaGGAAGGACCCCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: ASRPPGGPFLSPRGLPGPWGWTS*EGPQLG
Trigger: CCCCAGCTGGGGTCCTTCCCACGACGTCCACCCCCA...AGGGCCTGGAAGGCCCCTGGGGCTGAGAAAGGGTCCGCCCGGTGGCCTGGAGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS-3UTR CCA 90 bp CCAGGCCACCGGGCGGACCCTTTCTCAGCCCCAGGGGCCTTCCAGGCCCTTCTGACCCACGCCTCACAGTaGGGCCCTCTGACCGTGGCC +
Preference number: 4 (lower is better)
Translates to: PGHRADPFSAPGAFQALLTHASQ*GPLTVA
Trigger: GGCCACGGTCAGAGGGCCCCACTGTGAGGCGTGGGT...CAGAAGGGCCTGGAAGGCCCCTGGGGCTGAGAAAGGGTCCGCCCGGTGGCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp CCAGGCCACCGGGCGGACCCTTTCTCAGCCCCAGGGGCCTTCCAGGCCCTTCTGCATCACACCTGTCCGTaGCTTGCCGCCCCCGGAGAC +
Preference number: 4 (lower is better)
Translates to: PGHRADPFSAPGAFQALLHHTCP*LAAPGD
Trigger: GTCTCCGGGGGCGGCAAGTCACGGACAGGTGTGATG...CAGAAGGGCCTGGAAGGCCCCTGGGGCTGAGAAAGGGTCCGCCCGGTGGCCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp CGAAGTGACCAGCGGCCTCTGCGAGGCCCGAGGCAGAGTCACGGGGGAGGCGAGCATCACACCTGTCCGTaGCTTGCCGCCCCCGGAGAC +
Preference number: 4 (lower is better)
Translates to: RSDQRPLRGPRQSHGGGEHHTCP*LAAPGD
Trigger: GTCTCCGGGGGCGGCAAGTCACGGACAGGTGTGATG...CTCGCCTCCCCCGTGACTCTGCCTCGGGCCTCGCAGAGGCCGCTGGTCACTTCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp CAACATCCTGCCCAGTCCACGTGCTACTGCGCTCCCGGCGCCTGCCTCCAGGCCCAGTCCACGTGCTACTaGGCTCCCGGCGCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: QHPAQSTCYCAPGACLQAQSTCY*APGACL
Trigger: GAGGCAGGCGCCGGGAGCGCAGTAGCACGTGGACTG...GGCCTGGAGGCAGGCGCCGGGAGCGCAGTAGCACGTGGACTGGGCAGGATGTTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp CGAAGTGACCAGCGGCCTCTGCGAGGCCCGAGGCAGAGTCACGGGGGAGGCGAGAGCTGGCCATGGGGGTaGACGTCGTGGGAAGGACCC +
Preference number: 4 (lower is better)
Translates to: RSDQRPLRGPRQSHGGGESWPWG*TSWEGP
Trigger: GGGTCCTTCCCACGACGTCCACCCCCATGGCCAGCT...CTCGCCTCCCCCGTGACTCTGCCTCGGGCCTCGCAGAGGCCGCTGGTCACTTCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS-3UTR CCA 90 bp CCAGGCCACCGGGCGGACCCTTTCTCAGCCCCAGGGGCCTTCCAGGCCCTTCTGACAACGTGCGGTGCCTaGCAGCACGGCCCGCTCAAC +
Preference number: 4 (lower is better)
Translates to: PGHRADPFSAPGAFQALLTTCGA*QHGPLN
Trigger: GTTGAGCGGGCCGTGCTGCCAGGCACCGCACGTTGT...CAGAAGGGCCTGGAAGGCCCCTGGGGCTGAGAAAGGGTCCGCCCGGTGGCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS-3UTR GCA 90 bp GCCTCCAGGCCACCGGGCGGACCCTTTCTCAGCCCCAGGGGCCTTCCAGGCCCTTCCACCGCCTTCACCTaGGGGTTCATGGACTCCAGC +
Preference number: 4 (lower is better)
Translates to: ASRPPGGPFLSPRGLPGPSTAFT*GFMDSS
Trigger: GCTGGAGTCCATGAACCCGCAGGTGAAGGCGGTGGA...AGGGCCTGGAAGGCCCCTGGGGCTGAGAAAGGGTCCGCCCGGTGGCCTGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp GGAGAACAGGCACCGGTCACCCGCGGGATGGGTCCACACCATTCCAGCGGCTCTGTTAGCTCGCGCGCCTaGAGCAGCTACCCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: GEQAPVTRGMGPHHSSGSVSSRA*SSYPAP
Trigger: CGGGGCCGGGTAGCTGCTCCAGGCGCGCGAGCTAAC...AGAGCCGCTGGAATGGTGTGGACCCATCCCGCGGGTGACCGGTGCCTGTTCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340124.9
CDS-3UTR CCA 90 bp CCAGGCCACCGGGCGGACCCTTTCTCAGCCCCAGGGGCCTTCCAGGCCCTTCTGGATCACAGTGGTCTTTaGCCTCCTGCACCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: PGHRADPFSAPGAFQALLDHSGL*PPAPPA
Trigger: GGCGGGCGGTGCAGGAGGCCAAAGACCACTGTGATC...CAGAAGGGCCTGGAAGGCCCCTGGGGCTGAGAAAGGGTCCGCCCGGTGGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp GCCTCCAGGCCACCGGGCGGACCCTTTCTCAGCCCCAGGGGCCTTCCAGGCCCTAGAGAAGCCGCATGCTaGGGGATGGCACCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: ASRPPGGPFLSPRGLPGPREAAC*GMAPSC
Trigger: ACAGGAGGGTGCCATCCCCCAGCATGCGGCTTCTCT...AGGGCCTGGAAGGCCCCTGGGGCTGAGAAAGGGTCCGCCCGGTGGCCTGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp GGAGAACAGGCACCGGTCACCCGCGGGATGGGTCCACACCATTCCAGCGGCTCTCGATCTCGCCGGCCTTaGGCACGATGGGTCCCCGCA +
Preference number: 4 (lower is better)
Translates to: GEQAPVTRGMGPHHSSGSRSRRP*ARWVPA
Trigger: TGCGGGGACCCATCGTGCTCAAGGCCGGCGAGATCG...AGAGCCGCTGGAATGGTGTGGACCCATCCCGCGGGTGACCGGTGCCTGTTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp CAACATCCTGCCCAGTCCACGTGCTACTGCGCTCCCGGCGCCTGCCTCCAGGCCAGGCGAGCTCCACGTTaGTGGAGTACTCGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: QHPAQSTCYCAPGACLQARRAPR*WSTRAP
Trigger: TGGGGCCCGAGTACTCCAGCAACGTGGAGCTCGCCT...GGCCTGGAGGCAGGCGCCGGGAGCGCAGTAGCACGTGGACTGGGCAGGATGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp GGGATGGGTCCACACCATTCCAGCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCCTGCCCAGACACTaGGGGGCACAGGCGCACCGA +
Preference number: 4 (lower is better)
Translates to: GMGPHHSSGSLHGSGTLPGLPRH*GAQAHR
Trigger: TCGGTGCGCCTGTGCCCCCCAGTGTCTGGGCAGGCC...CGGCAGTGTCCCACTTCCGTGGAGAGAGCCGCTGGAATGGTGTGGACCCATCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp GCCTCCAGGCCACCGGGCGGACCCTTTCTCAGCCCCAGGGGCCTTCCAGGCCCTCAGAATTCTCAGGCCTaGCTGCGTTGCTGGGAAGCG +
Preference number: 4 (lower is better)
Translates to: ASRPPGGPFLSPRGLPGPQNSQA*LRCWEA
Trigger: CGCTTCCCAGCAACGCAGCCAGGCCTGAGAATTCTG...AGGGCCTGGAAGGCCCCTGGGGCTGAGAAAGGGTCCGCCCGGTGGCCTGGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp CAACATCCTGCCCAGTCCACGTGCTACTGCGCTCCCGGCGCCTGCCTCCAGGCCAGCCAGGCAAGCCTCTaGGTGCCCGGTGATGCACTG +
Preference number: 4 (lower is better)
Translates to: QHPAQSTCYCAPGACLQASQASL*VPGDAL
Trigger: CAGTGCATCACCGGGCACCCAGAGGCTTGCCTGGCT...GGCCTGGAGGCAGGCGCCGGGAGCGCAGTAGCACGTGGACTGGGCAGGATGTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp AGGATGGGGAAGCTCCCAGTGAGGGAGGCGAGGGCTAAGCCCGTAGCACCGCAGCCAGGCTTGGCTGACTaGGGAGCTGGCCATGGGGGT +
Preference number: 4 (lower is better)
Translates to: RMGKLPVREARAKPVAPQPGLAD*GAGHGG
Trigger: ACCCCCATGGCCAGCTCCTCAGTCAGCCAAGCCTGG...CTGCGGTGCTACGGGCTTAGCCCTCGCCTCCCTCACTGGGAGCTTCCCCATCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS-3UTR TCA 90 bp AGGATGGGGAAGCTCCCAGTGAGGGAGGCGAGGGCTAAGCCCGTAGCACCGCAGCTGGGCACCAGTAAGTaGACGGGCGGGAGGGGGCAT +
Preference number: 4 (lower is better)
Translates to: RMGKLPVREARAKPVAPQLGTSK*TGGRGH
Trigger: ATGCCCCCTCCCGCCCGTTCACTTACTGGTGCCCAG...CTGCGGTGCTACGGGCTTAGCCCTCGCCTCCCTCACTGGGAGCTTCCCCATCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS-3UTR GCA 90 bp AGGAATAGCCAGGCAAGCCTCTGGGTGCCCGGTGATGCACTGTCTGAGGCACAGAGCGCCGCCGCCCGCTaGATCGCGCGCTTGCGGAGA +
Preference number: 4 (lower is better)
Translates to: RNSQASLWVPGDALSEAQSAAAR*IARLRR
Trigger: TCTCCGCAAGCGCGCGATGCAGCGGGCGGCGGCGCT...CTGTGCCTCAGACAGTGCATCACCGGGCACCCAGAGGCTTGCCTGGCTATTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340124.9
CDS-3UTR GCA 90 bp CCAGGCCACCGGGCGGACCCTTTCTCAGCCCCAGGGGCCTTCCAGGCCCTTCTGCAGCATAGAGGCTGCTaGCTCACTCCTCGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: PGHRADPFSAPGAFQALLQHRGC*LTPRPL
Trigger: AAGAGGCCGAGGAGTGAGGCAGCAGCCTCTATGCTG...CAGAAGGGCCTGGAAGGCCCCTGGGGCTGAGAAAGGGTCCGCCCGGTGGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp CGAAGTGACCAGCGGCCTCTGCGAGGCCCGAGGCAGAGTCACGGGGGAGGCGAGCAGCATAGAGGCTGCTaGCTCACTCCTCGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: RSDQRPLRGPRQSHGGGEQHRGC*LTPRPL
Trigger: AAGAGGCCGAGGAGTGAGGCAGCAGCCTCTATGCTG...CTCGCCTCCCCCGTGACTCTGCCTCGGGCCTCGCAGAGGCCGCTGGTCACTTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp CGAAGTGACCAGCGGCCTCTGCGAGGCCCGAGGCAGAGTCACGGGGGAGGCGAGTCACAGCATAGAGGCTaGTGCCTCACTCCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: RSDQRPLRGPRQSHGGGESQHRG*CLTPRP
Trigger: AGGCCGAGGAGTGAGGCAGCAGCCTCTATGCTGTGA...CTCGCCTCCCCCGTGACTCTGCCTCGGGCCTCGCAGAGGCCGCTGGTCACTTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp GCCTCCAGGCCACCGGGCGGACCCTTTCTCAGCCCCAGGGGCCTTCCAGGCCCTCGGGGATTGCCCTTGTaGGGAGGATATTTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: ASRPPGGPFLSPRGLPGPRGLPL*GGYFQP
Trigger: GGGCTGAAAATATCCTCCCCACAAGGGCAATCCCCG...AGGGCCTGGAAGGCCCCTGGGGCTGAGAAAGGGTCCGCCCGGTGGCCTGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp CAACATCCTGCCCAGTCCACGTGCTACTGCGCTCCCGGCGCCTGCCTCCAGGCCCGCCATCCCTCCTGGTaGTGTAGGCAGCCACATCTT +
Preference number: 4 (lower is better)
Translates to: QHPAQSTCYCAPGACLQARHPSW*CRQPHL
Trigger: AAGATGTGGCTGCCTACATCACCAGGAGGGATGGCG...GGCCTGGAGGCAGGCGCCGGGAGCGCAGTAGCACGTGGACTGGGCAGGATGTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp CGAAGTGACCAGCGGCCTCTGCGAGGCCCGAGGCAGAGTCACGGGGGAGGCGAGCATAGTGCCATCACCTaGCGGAGGAAGGTGATTGGC +
Preference number: 4 (lower is better)
Translates to: RSDQRPLRGPRQSHGGGEHSAIT*RRKVIG
Trigger: GCCAATCACCTTCCTCCGGCAGGTGATGGCACTATG...CTCGCCTCCCCCGTGACTCTGCCTCGGGCCTCGCAGAGGCCGCTGGTCACTTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp CCAGGCCACCGGGCGGACCCTTTCTCAGCCCCAGGGGCCTTCCAGGCCCTTCTGGCAGGTTTGGGTAGGTaGATAGTGCCATCACCTGCC +
Preference number: 4 (lower is better)
Translates to: PGHRADPFSAPGAFQALLAGLGR*IVPSPA
Trigger: GGCAGGTGATGGCACTATGCACCTACCCAAACCTGC...CAGAAGGGCCTGGAAGGCCCCTGGGGCTGAGAAAGGGTCCGCCCGGTGGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp AGGAATAGCCAGGCAAGCCTCTGGGTGCCCGGTGATGCACTGTCTGAGGCACAGCCTGCCCAGTCCACGTaGTACTGCGCTCCCGGCGCC +
Preference number: 4 (lower is better)
Translates to: RNSQASLWVPGDALSEAQPAQST*YCAPGA
Trigger: GGCGCCGGGAGCGCAGTAGCACGTGGACTGGGCAGG...CTGTGCCTCAGACAGTGCATCACCGGGCACCCAGAGGCTTGCCTGGCTATTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp GCCTCCAGGCCACCGGGCGGACCCTTTCTCAGCCCCAGGGGCCTTCCAGGCCCTGAGTACACGTTGTCCTaGTACACCTCATCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: ASRPPGGPFLSPRGLPGPEYTLS*YTSSAR
Trigger: CCTGGCTGATGAGGTGTACCAGGACAACGTGTACTC...AGGGCCTGGAAGGCCCCTGGGGCTGAGAAAGGGTCCGCCCGGTGGCCTGGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp GGAGAACAGGCACCGGTCACCCGCGGGATGGGTCCACACCATTCCAGCGGCTCTGAGGGAAGGCGTACATaGCCCCCTGCAAGGGGTTGC +
Preference number: 4 (lower is better)
Translates to: GEQAPVTRGMGPHHSSGSEGRRT*PPARGC
Trigger: GCAACCCCTTGCAGGGGGCCATGTACGCCTTCCCTC...AGAGCCGCTGGAATGGTGTGGACCCATCCCGCGGGTGACCGGTGCCTGTTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp GGAGAACAGGCACCGGTCACCCGCGGGATGGGTCCACACCATTCCAGCGGCTCTCCGCATGCTGGGGGATaGCACCCTCCTGTACTGGGA +
Preference number: 4 (lower is better)
Translates to: GEQAPVTRGMGPHHSSGSPHAGG*HPPVLG
Trigger: TCCCAGTACAGGAGGGTGCCATCCCCCAGCATGCGG...AGAGCCGCTGGAATGGTGTGGACCCATCCCGCGGGTGACCGGTGCCTGTTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp CTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACTGAAATTCAGGCTCGGGCCGCACCTTaGGCACCGCCGAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: LSTEVGHCRAALCVTEIQARAAP*APPRPR
Trigger: CCGAGGCCTCGGCGGTGCTCAAGGTGCGGCCCGAGC...CTGAATTTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340124.9
CDS-3UTR TCA 90 bp GCTAATGGCAGAGAAGCCGCATGCTGGGGGATGGCACCCTCCTGTACTGGGAGATCATGGACTCCAGCGTaGGGATGCGCTCGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: ANGREAACWGMAPSCTGRSWTPA*GCARAG
Trigger: GCCGGCGCGAGCGCATCCTCACGCTGGAGTCCATGA...TCTCCCAGTACAGGAGGGTGCCATCCCCCAGCATGCGGCTTCTCTGCCATTAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp GCCTCCAGGCCACCGGGCGGACCCTTTCTCAGCCCCAGGGGCCTTCCAGGCCCTCACAGATCATGGTGGTaGGTTTGGATTTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: ASRPPGGPFLSPRGLPGPHRSWW*VWISSP
Trigger: AGGGCTGGAAATCCAAACTCACCACCATGATCTGTG...AGGGCCTGGAAGGCCCCTGGGGCTGAGAAAGGGTCCGCCCGGTGGCCTGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp ACCGGTCACCCGCGGGATGGGTCCACACCATTCCAGCGGCTCTCTCCACGGAAGTTAGCCAGGCTTGGCTaGCTGAGGAGCTGGCCATGG +
Preference number: 4 (lower is better)
Translates to: TGHPRDGSTPFQRLSPRKLARLG*LRSWPW
Trigger: CCATGGCCAGCTCCTCAGTCAGCCAAGCCTGGCTAA...CTTCCGTGGAGAGAGCCGCTGGAATGGTGTGGACCCATCCCGCGGGTGACCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS-3UTR GCA 90 bp CACCATTCCAGCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGCACCTGTCCGTGACTTaGCGCCCCCGGAGACGAGGA +
Preference number: 4 (lower is better)
Translates to: HHSSGSLHGSGTLPGCTMHLSVT*RPRRRG
Trigger: TCCTCGTCTCCGGGGGCGGCAAGTCACGGACAGGTG...CATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGCTGGAATGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp GGAGAACAGGCACCGGTCACCCGCGGGATGGGTCCACACCATTCCAGCGGCTCTAGGCAAGCCTCTGGGTaGCCGGTGATGCACTGTCTG +
Preference number: 4 (lower is better)
Translates to: GEQAPVTRGMGPHHSSGSRQASG*PVMHCL
Trigger: CAGACAGTGCATCACCGGGCACCCAGAGGCTTGCCT...AGAGCCGCTGGAATGGTGTGGACCCATCCCGCGGGTGACCGGTGCCTGTTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp AGGCAGAGTCACGGGGGAGGCGAGTTCAGCCTGACGGGCATTGGGAGGAAGAGCGATCACAGTGGTCTTTaGCCTCCTGCACCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: RQSHGGGEFSLTGIGRKSDHSGL*PPAPPA
Trigger: GGCGGGCGGTGCAGGAGGCCAAAGACCACTGTGATC...GCTCTTCCTCCCAATGCCCGTCAGGCTGAACTCGCCTCCCCCGTGACTCTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp ACCGGTCACCCGCGGGATGGGTCCACACCATTCCAGCGGCTCTCTCCACGGAAGCGAGCTCCACGTTGCTaGAGTACTCGGGCCCCATCT +
Preference number: 4 (lower is better)
Translates to: TGHPRDGSTPFQRLSPRKRAPRC*STRAPS
Trigger: AGATGGGGCCCGAGTACTCCAGCAACGTGGAGCTCG...CTTCCGTGGAGAGAGCCGCTGGAATGGTGTGGACCCATCCCGCGGGTGACCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp AGGAATAGCCAGGCAAGCCTCTGGGTGCCCGGTGATGCACTGTCTGAGGCACAGGGACAGGTCTCCCGCTaGGGCTCAGGCGTCCTCACG +
Preference number: 4 (lower is better)
Translates to: RNSQASLWVPGDALSEAQGQVSR*GSGVLT
Trigger: CGTGAGGACGCCTGAGCCCCAGCGGGAGACCTGTCC...CTGTGCCTCAGACAGTGCATCACCGGGCACCCAGAGGCTTGCCTGGCTATTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp GCCTCCAGGCCACCGGGCGGACCCTTTCTCAGCCCCAGGGGCCTTCCAGGCCCTCGTACAGCACCTTCTTaGAGGAGTGGAATCTGCAAT +
Preference number: 4 (lower is better)
Translates to: ASRPPGGPFLSPRGLPGPRTAPS*RSGICN
Trigger: ATTGCAGATTCCACTCCTTCAAGAAGGTGCTGTACG...AGGGCCTGGAAGGCCCCTGGGGCTGAGAAAGGGTCCGCCCGGTGGCCTGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp CCTTCCAGGCCCTTCTGTTCAAAGGACCGGATGCTTCACACCGCTAAGGGCTTTCACAGTGGGGCCCTCTaGCCGTGGCCGCAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: PSRPFCSKDRMLHTAKGFHSGAL*PWPQPP
Trigger: TGGGGGCTGCGGCCACGGTCAGAGGGCCCCACTGTG...AAAGCCCTTAGCGGTGTGAAGCATCCGGTCCTTTGAACAGAAGGGCCTGGAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp GCCTCCAGGCCACCGGGCGGACCCTTTCTCAGCCCCAGGGGCCTTCCAGGCCCTTGCACTATGTGTCACTaGAATTCAGGGAGACCTCTC +
Preference number: 4 (lower is better)
Translates to: ASRPPGGPFLSPRGLPGPCTMCH*NSGRPL
Trigger: GAGAGGTCTCCCTGAATTTCAGTGACACATAGTGCA...AGGGCCTGGAAGGCCCCTGGGGCTGAGAAAGGGTCCGCCCGGTGGCCTGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp GCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACTGAATTCCCGCCACAAGCCTaGAGGATCCGCCGGGCACGT +
Preference number: 4 (lower is better)
Translates to: AALSTEVGHCRAALCVTEFPPQA*RIRRAR
Trigger: ACGTGCCCGGCGGATCCTGCAGGCTTGTGGCGGGAA...TTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp ATTCCAGCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCCACCTGTCCGTGACTTaGCGCCCCCGGAGACGAGGA +
Preference number: 4 (lower is better)
Translates to: IPAALSTEVGHCRAALCVHLSVT*RPRRRG
Trigger: TCCTCGTCTCCGGGGGCGGCAAGTCACGGACAGGTG...GACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGCTGGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp ATTCCAGCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCTGGTCTTTGGCCTCCTaGACCGCCCGCCGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: IPAALSTEVGHCRAALCVWSLAS*TARRSS
Trigger: TGAGCTCCGGCGGGCGGTGCAGGAGGCCAAAGACCA...GACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGCTGGAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp GCCTCCAGGCCACCGGGCGGACCCTTTCTCAGCCCCAGGGGCCTTCCAGGCCCTTGCTTCCTCAGCACATaGTACACACACAGATCTGGA +
Preference number: 4 (lower is better)
Translates to: ASRPPGGPFLSPRGLPGPCFLST*YTHRSG
Trigger: TCCAGATCTGTGTGTGTAGCATGTGCTGAGGAAGCA...AGGGCCTGGAAGGCCCCTGGGGCTGAGAAAGGGTCCGCCCGGTGGCCTGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp AGGCAGAGTCACGGGGGAGGCGAGTTCAGCCTGACGGGCATTGGGAGGAAGAGCAGGCAAGCCTCTGGGTaGCCGGTGATGCACTGTCTG +
Preference number: 4 (lower is better)
Translates to: RQSHGGGEFSLTGIGRKSRQASG*PVMHCL
Trigger: CAGACAGTGCATCACCGGGCACCCAGAGGCTTGCCT...GCTCTTCCTCCCAATGCCCGTCAGGCTGAACTCGCCTCCCCCGTGACTCTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp CCAGGCCACCGGGCGGACCCTTTCTCAGCCCCAGGGGCCTTCCAGGCCCTTCTGAGCCACAGGTTGATCTaGATCTGTTCCTCCCCAACA +
Preference number: 4 (lower is better)
Translates to: PGHRADPFSAPGAFQALLSHRLI*ICSSPT
Trigger: TGTTGGGGAGGAACAGATGCAGATCAACCTGTGGCT...CAGAAGGGCCTGGAAGGCCCCTGGGGCTGAGAAAGGGTCCGCCCGGTGGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp AGGCAGAGTCACGGGGGAGGCGAGTTCAGCCTGACGGGCATTGGGAGGAAGAGCCCCAGCTGGGGCTGCTaGGGTTTTTCCCTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: RQSHGGGEFSLTGIGRKSPSWGC*GFSLAQ
Trigger: CTGAGCAAGGGAAAAACCGCAGCAGCCCCAGCTGGG...GCTCTTCCTCCCAATGCCCGTCAGGCTGAACTCGCCTCCCCCGTGACTCTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS-3UTR CCA 90 bp GCCTCCAGGCCACCGGGCGGACCCTTTCTCAGCCCCAGGGGCCTTCCAGGCCCTATAGAGGGGATATTGTaGGATGGGGATCATCACACC +
Preference number: 4 (lower is better)
Translates to: ASRPPGGPFLSPRGLPGPIEGIL*DGDHHT
Trigger: GGTGTGATGATCCCCATCCCACAATATCCCCTCTAT...AGGGCCTGGAAGGCCCCTGGGGCTGAGAAAGGGTCCGCCCGGTGGCCTGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp ACCGGTCACCCGCGGGATGGGTCCACACCATTCCAGCGGCTCTCTCCACGGAAGTCACGACAATGTCCATaGCGGCCTGCCCAGACACTG +
Preference number: 4 (lower is better)
Translates to: TGHPRDGSTPFQRLSPRKSRQCP*RPAQTL
Trigger: CAGTGTCTGGGCAGGCCGCCATGGACATTGTCGTGA...CTTCCGTGGAGAGAGCCGCTGGAATGGTGTGGACCCATCCCGCGGGTGACCGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp GCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACTGAACGGTCACCCGCGGGATaGGTCCACACCATTCCAGCG +
Preference number: 4 (lower is better)
Translates to: AALSTEVGHCRAALCVTERSPAG*VHTIPA
Trigger: CGCTGGAATGGTGTGGACCCATCCCGCGGGTGACCG...TTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp GGGATGGGTCCACACCATTCCAGCGGCTCTCTCCACGGAAGTGGGACACTGCCGCTGAGTGCCCGGTGCTaGGCACCAGTAAGTGAACGG +
Preference number: 4 (lower is better)
Translates to: GMGPHHSSGSLHGSGTLPLSARC*APVSER
Trigger: CCGTTCACTTACTGGTGCCCAGCACCGGGCACTCAG...CGGCAGTGTCCCACTTCCGTGGAGAGAGCCGCTGGAATGGTGTGGACCCATCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS-3UTR TCA 90 bp ACCGGTCACCCGCGGGATGGGTCCACACCATTCCAGCGGCTCTCTCCACGGAAGTCTCAGGGTGCAGGTTaGTCACCTCCATGTAGCCTC +
Preference number: 4 (lower is better)
Translates to: TGHPRDGSTPFQRLSPRKSQGAG*SPPCSL
Trigger: GAGGCTACATGGAGGTGATCAACCTGCACCCTGAGA...CTTCCGTGGAGAGAGCCGCTGGAATGGTGTGGACCCATCCCGCGGGTGACCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp GCCTCCAGGCCACCGGGCGGACCCTTTCTCAGCCCCAGGGGCCTTCCAGGCCCTACTTCTCCAGGAAGTTaGTGTGGAAGTCTTTCACCT +
Preference number: 4 (lower is better)
Translates to: ASRPPGGPFLSPRGLPGPTSPGS*CGSLSP
Trigger: AGGTGAAAGACTTCCACATCAACTTCCTGGAGAAGT...AGGGCCTGGAAGGCCCCTGGGGCTGAGAAAGGGTCCGCCCGGTGGCCTGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp CAACATCCTGCCCAGTCCACGTGCTACTGCGCTCCCGGCGCCTGCCTCCAGGCCCACAGATCATGGTGGTaGGTTTGGATTTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: QHPAQSTCYCAPGACLQAHRSWW*VWISSP
Trigger: AGGGCTGGAAATCCAAACTCACCACCATGATCTGTG...GGCCTGGAGGCAGGCGCCGGGAGCGCAGTAGCACGTGGACTGGGCAGGATGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp GGAGAACAGGCACCGGTCACCCGCGGGATGGGTCCACACCATTCCAGCGGCTCTGTACTGGGAGAAGCCTaGTGCCACAGGTCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: GEQAPVTRGMGPHHSSGSVLGEA*CHRSES
Trigger: AGACTCTGACCTGTGGCATCAGGCTTCTCCCAGTAC...AGAGCCGCTGGAATGGTGTGGACCCATCCCGCGGGTGACCGGTGCCTGTTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp ATTCCAGCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCATTGCAAGGCCTCACTaGGTGCCCGGTGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: IPAALSTEVGHCRAALCVIARPH*VPGAGH
Trigger: GTGCCCAGCACCGGGCACTCAGTGAGGCCTTGCAAT...GACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGCTGGAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS-3UTR GCA 90 bp GCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACTGAAGCTGCATCGCGCGCTTaGGGAGAGAAACCCTGTCGC +
Preference number: 4 (lower is better)
Translates to: AALSTEVGHCRAALCVTEAASRA*GEKPCR
Trigger: GCGACAGGGTTTCTCTCCGCAAGCGCGCGATGCAGC...TTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340124.9
CDS-3UTR GCA 90 bp CCAGGCCACCGGGCGGACCCTTTCTCAGCCCCAGGGGCCTTCCAGGCCCTTCTGCTTCTATGCACTTTCTaGTTTGTACCTGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: PGHRADPFSAPGAFQALLLLCTF*FVPGLW
Trigger: CCACAGGCCAGGTACAAAGCAGAAAGTGCATAGAAG...CAGAAGGGCCTGGAAGGCCCCTGGGGCTGAGAAAGGGTCCGCCCGGTGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp CCAGGCCACCGGGCGGACCCTTTCTCAGCCCCAGGGGCCTTCCAGGCCCTTCTGTTCTCTCGGCTGAATTaGTCAAAGGACTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: PGHRADPFSAPGAFQALLFSRLN*SKDSSP
Trigger: AGGAGAGGAGTCCTTTGAGCAATTCAGCCGAGAGAA...CAGAAGGGCCTGGAAGGCCCCTGGGGCTGAGAAAGGGTCCGCCCGGTGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp AGATTCAGCTCGCCACCATTCAAGAAAGGACAGGGCCTTGGCTGCTCGGCAGGTCAGTCCACGTGCTACTaGGCTCCCGGCGCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: RFSSPPFKKGQGLGCSAGQSTCY*APGACL
Trigger: GAGGCAGGCGCCGGGAGCGCAGTAGCACGTGGACTG...ACCTGCCGAGCAGCCAAGGCCCTGTCCTTTCTTGAATGGTGGCGAGCTGAATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp ATTCCAGCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCCTGCGGTTTTTCCCTTaGTCAGCGGCCCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: IPAALSTEVGHCRAALCVLRFFP*SAAPAS
Trigger: GGAGGCTGGGGCCGCTGAGCAAGGGAAAAACCGCAG...GACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGCTGGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS-3UTR CCA 90 bp CGAAGTGACCAGCGGCCTCTGCGAGGCCCGAGGCAGAGTCACGGGGGAGGCGAGATAGAGGGGATATTGTaGGATGGGGATCATCACACC +
Preference number: 4 (lower is better)
Translates to: RSDQRPLRGPRQSHGGGEIEGIL*DGDHHT
Trigger: GGTGTGATGATCCCCATCCCACAATATCCCCTCTAT...CTCGCCTCCCCCGTGACTCTGCCTCGGGCCTCGCAGAGGCCGCTGGTCACTTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp GCCTCCAGGCCACCGGGCGGACCCTTTCTCAGCCCCAGGGGCCTTCCAGGCCCTACCTTCTTGAAGGAGTaGAATCTGCAATCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: ASRPPGGPFLSPRGLPGPTFLKE*NLQSGE
Trigger: CTCTCCAGATTGCAGATTCCACTCCTTCAAGAAGGT...AGGGCCTGGAAGGCCCCTGGGGCTGAGAAAGGGTCCGCCCGGTGGCCTGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp GACACTGCCGGGCTGCACTATGTGTCACTGAAATTCAGGGAGACCTCTCAGACGGGCCTGCCCAGACACTaGGGGGCACAGGCGCACCGA +
Preference number: 4 (lower is better)
Translates to: DTAGLHYVSLKFRETSQTGLPRH*GAQAHR
Trigger: TCGGTGCGCCTGTGCCCCCCAGTGTCTGGGCAGGCC...CGTCTGAGAGGTCTCCCTGAATTTCAGTGACACATAGTGCAGCCCGGCAGTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp GCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACTGAAGAGGGAAGGCGTACATaGCCCCCTGCAAGGGGTTGC +
Preference number: 4 (lower is better)
Translates to: AALSTEVGHCRAALCVTEEGRRT*PPARGC
Trigger: GCAACCCCTTGCAGGGGGCCATGTACGCCTTCCCTC...TTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp GCTAATGGCAGAGAAGCCGCATGCTGGGGGATGGCACCCTCCTGTACTGGGAGACCCAGACCACAGAAGTaGCTGGTCGGCCAAGGCTCC +
Preference number: 4 (lower is better)
Translates to: ANGREAACWGMAPSCTGRPRPQK*LVGQGS
Trigger: GGAGCCTTGGCCGACCAGCCACTTCTGTGGTCTGGG...TCTCCCAGTACAGGAGGGTGCCATCCCCCAGCATGCGGCTTCTCTGCCATTAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS-3UTR TCA 90 bp GACACTGCCGGGCTGCACTATGTGTCACTGAAATTCAGGGAGACCTCTCAGACGCGATCTCGCCGGCCTTaGGCACGATGGGTCCCCGCA +
Preference number: 4 (lower is better)
Translates to: DTAGLHYVSLKFRETSQTRSRRP*ARWVPA
Trigger: TGCGGGGACCCATCGTGCTCAAGGCCGGCGAGATCG...CGTCTGAGAGGTCTCCCTGAATTTCAGTGACACATAGTGCAGCCCGGCAGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp GGGATGGGTCCACACCATTCCAGCGGCTCTCTCCACGGAAGTGGGACACTGCCGGTACTGGGAGAAGCCTaGTGCCACAGGTCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: GMGPHHSSGSLHGSGTLPVLGEA*CHRSES
Trigger: AGACTCTGACCTGTGGCATCAGGCTTCTCCCAGTAC...CGGCAGTGTCCCACTTCCGTGGAGAGAGCCGCTGGAATGGTGTGGACCCATCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp AGGAATAGCCAGGCAAGCCTCTGGGTGCCCGGTGATGCACTGTCTGAGGCACAGTCCACCGCCTTCACCTaGGGGTTCATGGACTCCAGC +
Preference number: 4 (lower is better)
Translates to: RNSQASLWVPGDALSEAQSTAFT*GFMDSS
Trigger: GCTGGAGTCCATGAACCCGCAGGTGAAGGCGGTGGA...CTGTGCCTCAGACAGTGCATCACCGGGCACCCAGAGGCTTGCCTGGCTATTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp ACCGGTCACCCGCGGGATGGGTCCACACCATTCCAGCGGCTCTCTCCACGGAAGCCCTTGATCTCAGGGTaGAGGTTGATCACCTCCATG +
Preference number: 4 (lower is better)
Translates to: TGHPRDGSTPFQRLSPRKPLISG*RLITSM
Trigger: CATGGAGGTGATCAACCTGCACCCTGAGATCAAGGG...CTTCCGTGGAGAGAGCCGCTGGAATGGTGTGGACCCATCCCGCGGGTGACCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp GGGATGGGTCCACACCATTCCAGCGGCTCTCTCCACGGAAGTGGGACACTGCCGCCCCCTGCAAGGGGTTaGAGTGAATTCCTGGGACTT +
Preference number: 4 (lower is better)
Translates to: GMGPHHSSGSLHGSGTLPPPARG*SEFLGL
Trigger: AAGTCCCAGGAATTCACTGCAACCCCTTGCAGGGGG...CGGCAGTGTCCCACTTCCGTGGAGAGAGCCGCTGGAATGGTGTGGACCCATCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp TCTCAGACGGGGTTCCAGCCTACGCATGTTCAAGGGAACCCCTCATTCCCAAAGGTGACCAGCGGCCTCTaGGAGGCCCGAGGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: SQTGFQPTHVQGNPSFPKVTSGL*EARGRV
Trigger: GACTCTGCCTCGGGCCTCGCAGAGGCCGCTGGTCAC...CTTTGGGAATGAGGGGTTCCCTTGAACATGCGTAGGCTGGAACCCCGTCTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp AGGATGGGGAAGCTCCCAGTGAGGGAGGCGAGGGCTAAGCCCGTAGCACCGCAGGTTCAAAGGACCGGATaGTTCACACCGCTAAGGGCT +
Preference number: 4 (lower is better)
Translates to: RMGKLPVREARAKPVAPQVQRTG*FTPLRA
Trigger: AGCCCTTAGCGGTGTGAAGCATCCGGTCCTTTGAAC...CTGCGGTGCTACGGGCTTAGCCCTCGCCTCCCTCACTGGGAGCTTCCCCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp CACCATTCCAGCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGACGGAAGTGGGACACTaGCGGGCTGCACTATGTGTC +
Preference number: 4 (lower is better)
Translates to: HHSSGSLHGSGTLPGCTMTEVGH*RAALCV
Trigger: GACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGT...CATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGCTGGAATGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp AGATTCAGCTCGCCACCATTCAAGAAAGGACAGGGCCTTGGCTGCTCGGCAGGTGGCAGAGAAGCCGCATaGTGGGGGATGGCACCCTCC +
Preference number: 4 (lower is better)
Translates to: RFSSPPFKKGQGLGCSAGGREAA*WGMAPS
Trigger: GGAGGGTGCCATCCCCCAGCATGCGGCTTCTCTGCC...ACCTGCCGAGCAGCCAAGGCCCTGTCCTTTCTTGAATGGTGGCGAGCTGAATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp TCTCAGACGGGGTTCCAGCCTACGCATGTTCAAGGGAACCCCTCATTCCCAAAGCGCGCGCTCACCCGCTaGAGCTCGAGCTCGATCTCG +
Preference number: 4 (lower is better)
Translates to: SQTGFQPTHVQGNPSFPKRALTR*SSSSIS
Trigger: CGAGATCGAGCTCGAGCTGCAGCGGGTGAGCGCGCG...CTTTGGGAATGAGGGGTTCCCTTGAACATGCGTAGGCTGGAACCCCGTCTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS-3UTR CCA 90 bp ACCGGTCACCCGCGGGATGGGTCCACACCATTCCAGCGGCTCTCTCCACGGAAGGGGGATATTGTGGGATaGGGATCATCACACCTGTCC +
Preference number: 4 (lower is better)
Translates to: TGHPRDGSTPFQRLSPRKGDIVG*GSSHLS
Trigger: GGACAGGTGTGATGATCCCCATCCCACAATATCCCC...CTTCCGTGGAGAGAGCCGCTGGAATGGTGTGGACCCATCCCGCGGGTGACCGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp GCTAATGGCAGAGAAGCCGCATGCTGGGGGATGGCACCCTCCTGTACTGGGAGACGAGCTCCACGTTGCTaGAGTACTCGGGCCCCATCT +
Preference number: 4 (lower is better)
Translates to: ANGREAACWGMAPSCTGRRAPRC*STRAPS
Trigger: AGATGGGGCCCGAGTACTCCAGCAACGTGGAGCTCG...TCTCCCAGTACAGGAGGGTGCCATCCCCCAGCATGCGGCTTCTCTGCCATTAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp CACCATTCCAGCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGAGCAGCTTCACCAGCTaGCCCTTGATCTCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: HHSSGSLHGSGTLPGCTMSSFTS*PLISGC
Trigger: GCACCCTGAGATCAAGGGCCAGCTGGTGAAGCTGCT...CATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGCTGGAATGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp GGAGAACAGGCACCGGTCACCCGCGGGATGGGTCCACACCATTCCAGCGGCTCTAGATTCAGAGAACCCTaGTCACACCTGCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GEQAPVTRGMGPHHSSGSRFREP*SHLLSR
Trigger: CCTGCTCAGCAGGTGTGACCAGGGTTCTCTGAATCT...AGAGCCGCTGGAATGGTGTGGACCCATCCCGCGGGTGACCGGTGCCTGTTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp CTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACTGAAATTCAGACCCACGCCTCACAGTaGGGCCCTCTGACCGTGGCC +
Preference number: 4 (lower is better)
Translates to: LSTEVGHCRAALCVTEIQTHASQ*GPLTVA
Trigger: GGCCACGGTCAGAGGGCCCCACTGTGAGGCGTGGGT...CTGAATTTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp CACCATTCCAGCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGCAGAATTCTCAGGCCTaGCTGCGTTGCTGGGAAGCG +
Preference number: 4 (lower is better)
Translates to: HHSSGSLHGSGTLPGCTMQNSQA*LRCWEA
Trigger: CGCTTCCCAGCAACGCAGCCAGGCCTGAGAATTCTG...CATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGCTGGAATGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp AGATTCAGCTCGCCACCATTCAAGAAAGGACAGGGCCTTGGCTGCTCGGCAGGTGAAAGGACAGGGCCTTaGCTGCTCGGCAGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: RFSSPPFKKGQGLGCSAGERTGP*LLGRSR
Trigger: CCGGGACCTGCCGAGCAGCCAAGGCCCTGTCCTTTC...ACCTGCCGAGCAGCCAAGGCCCTGTCCTTTCTTGAATGGTGGCGAGCTGAATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp ATTCCAGCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCTCAGAGTCTGCAGCCTaGGAGGGGAGCCGGAAGCTA +
Preference number: 4 (lower is better)
Translates to: IPAALSTEVGHCRAALCVSESAA*EGSRKL
Trigger: TAGCTTCCGGCTCCCCTCCCAGGCTGCAGACTCTGA...GACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGCTGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp AGGAATAGCCAGGCAAGCCTCTGGGTGCCCGGTGATGCACTGTCTGAGGCACAGTCAGAGTCTGCAGCCTaGGAGGGGAGCCGGAAGCTA +
Preference number: 4 (lower is better)
Translates to: RNSQASLWVPGDALSEAQSESAA*EGSRKL
Trigger: TAGCTTCCGGCTCCCCTCCCAGGCTGCAGACTCTGA...CTGTGCCTCAGACAGTGCATCACCGGGCACCCAGAGGCTTGCCTGGCTATTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR CAA 72 bp GATTCAGCTCGCCACCATTCAAGAAAGGACAGGGCCTaGGCTGCTCGGCAGGTCCCGGGGATTGCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: DSARHHSRKDRA*AARQVPGIALV
Trigger: CACAAGGGCAATCCCCGGGACCTGCCGAGCAGCCAAGGCCCTGTCCTTTCTTGAATGGTGGCGAGCTGAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp AGGATGGGGAAGCTCCCAGTGAGGGAGGCGAGGGCTAAGCCCGTAGCACCGCAGACTCCTTCTCTCGGCTaGATTGCTCAAAGGACTCCT +
Preference number: 4 (lower is better)
Translates to: RMGKLPVREARAKPVAPQTPSLG*IAQRTP
Trigger: AGGAGTCCTTTGAGCAATTCAGCCGAGAGAAGGAGT...CTGCGGTGCTACGGGCTTAGCCCTCGCCTCCCTCACTGGGAGCTTCCCCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp GGAGAACAGGCACCGGTCACCCGCGGGATGGGTCCACACCATTCCAGCGGCTCTTGCAAGGGGTTGCAGTaGATTCCTGGGACTTGGTTA +
Preference number: 4 (lower is better)
Translates to: GEQAPVTRGMGPHHSSGSCKGLQ*IPGTWL
Trigger: TAACCAAGTCCCAGGAATTCACTGCAACCCCTTGCA...AGAGCCGCTGGAATGGTGTGGACCCATCCCGCGGGTGACCGGTGCCTGTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp GGAGAACAGGCACCGGTCACCCGCGGGATGGGTCCACACCATTCCAGCGGCTCTAAAACAGCCACAGGTTaGTCTGCATCTGTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GEQAPVTRGMGPHHSSGSKTATG*SASVPP
Trigger: GGGAGGAACAGATGCAGATCAACCTGTGGCTGTTTT...AGAGCCGCTGGAATGGTGTGGACCCATCCCGCGGGTGACCGGTGCCTGTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp GGAGAACAGGCACCGGTCACCCGCGGGATGGGTCCACACCATTCCAGCGGCTCTGTCAGGAGATACCTGTaGGAACCTAGACGGGAAAAC +
Preference number: 4 (lower is better)
Translates to: GEQAPVTRGMGPHHSSGSVRRYL*EPRREN
Trigger: GTTTTCCCGTCTAGGTTCTCACAGGTATCTCCTGAC...AGAGCCGCTGGAATGGTGTGGACCCATCCCGCGGGTGACCGGTGCCTGTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp GCCTCCAGGCCACCGGGCGGACCCTTTCTCAGCCCCAGGGGCCTTCCAGGCCCTCCAAGAACTTATCACTaGGACTCTATTGCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: ASRPPGGPFLSPRGLPGPPRTYH*DSIASF
Trigger: GAAAGAAGCAATAGAGTCTCAGTGATAAGTTCTTGG...AGGGCCTGGAAGGCCCCTGGGGCTGAGAAAGGGTCCGCCCGGTGGCCTGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS-3UTR GCA 90 bp CTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACTGAAATTCAGTTCCCGCCACAAGCCTaGAGGATCCGCCGGGCACGT +
Preference number: 4 (lower is better)
Translates to: LSTEVGHCRAALCVTEIQFPPQA*RIRRAR
Trigger: ACGTGCCCGGCGGATCCTGCAGGCTTGTGGCGGGAA...CTGAATTTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp GCTCAAAAGAGAGGCGCTCTCAACATCAAGGCACAAAGAAAGACGTCTCCAGGGCCTGCCCAGTCCACGTaGTACTGCGCTCCCGGCGCC +
Preference number: 4 (lower is better)
Translates to: AQKRGALNIKAQRKTSPGPAQST*YCAPGA
Trigger: GGCGCCGGGAGCGCAGTAGCACGTGGACTGGGCAGG...CCCTGGAGACGTCTTTCTTTGTGCCTTGATGTTGAGAGCGCCTCTCTTTTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp ATTCCAGCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACGGAAGTGGGACACTaGCGGGCTGCACTATGTGTC +
Preference number: 4 (lower is better)
Translates to: IPAALSTEVGHCRAALCVTEVGH*RAALCV
Trigger: GACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGT...GACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGCTGGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp ATTCAGAGAACCCTGGTCACACCTGCTGAGCAGGTCCCCTCTACTCTGGTTGCACAGCAGGGGGCGATGTaGTCACAGGCTCGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: IQRTLVTPAEQVPSTLVAQQGAM*SQARSG
Trigger: CCCTGACCGAGCCTGTGAGCACATCGCCCCCTGCTG...TGCAACCAGAGTAGAGGGGACCTGCTCAGCAGGTGTGACCAGGGTTCTCTGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp CTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACTGAAATTCAGGGCAGAGAAGCCGCATaGTGGGGGATGGCACCCTCC +
Preference number: 4 (lower is better)
Translates to: LSTEVGHCRAALCVTEIQGREAA*WGMAPS
Trigger: GGAGGGTGCCATCCCCCAGCATGCGGCTTCTCTGCC...CTGAATTTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp AGGAATAGCCAGGCAAGCCTCTGGGTGCCCGGTGATGCACTGTCTGAGGCACAGTCACAGCATAGAGGCTaGTGCCTCACTCCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: RNSQASLWVPGDALSEAQSQHRG*CLTPRP
Trigger: AGGCCGAGGAGTGAGGCAGCAGCCTCTATGCTGTGA...CTGTGCCTCAGACAGTGCATCACCGGGCACCCAGAGGCTTGCCTGGCTATTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp GGAGAACAGGCACCGGTCACCCGCGGGATGGGTCCACACCATTCCAGCGGCTCTAACTTTCTCAGGTGGTaGCTGGATAGGAAAGGCACC +
Preference number: 4 (lower is better)
Translates to: GEQAPVTRGMGPHHSSGSNFLRW*LDRKGT
Trigger: GGTGCCTTTCCTATCCAGGCACCACCTGAGAAAGTT...AGAGCCGCTGGAATGGTGTGGACCCATCCCGCGGGTGACCGGTGCCTGTTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp CACCATTCCAGCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTTTCTGCTTTGTACCTaGCCTGTGGGGTTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: HHSSGSLHGSGTLPGCTMFLLCT*PVGFPG
Trigger: CCCTGGGAACCCCACAGGCCAGGTACAAAGCAGAAA...CATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGCTGGAATGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp CTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACTGAAATTCAGCGGTCACCCGCGGGATaGGTCCACACCATTCCAGCG +
Preference number: 4 (lower is better)
Translates to: LSTEVGHCRAALCVTEIQRSPAG*VHTIPA
Trigger: CGCTGGAATGGTGTGGACCCATCCCGCGGGTGACCG...CTGAATTTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp ATTCCAGCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCGGCACCCTCCTGTACTaGGAGAAGCCTGATGCCACA +
Preference number: 4 (lower is better)
Translates to: IPAALSTEVGHCRAALCVGTLLY*EKPDAT
Trigger: TGTGGCATCAGGCTTCTCCCAGTACAGGAGGGTGCC...GACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGCTGGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp GCTAATGGCAGAGAAGCCGCATGCTGGGGGATGGCACCCTCCTGTACTGGGAGAAAAATGATGACGAAGTaGCCAGCGGCCTCTGCGAGG +
Preference number: 4 (lower is better)
Translates to: ANGREAACWGMAPSCTGRKMMTK*PAASAR
Trigger: CCTCGCAGAGGCCGCTGGTCACTTCGTCATCATTTT...TCTCCCAGTACAGGAGGGTGCCATCCCCCAGCATGCGGCTTCTCTGCCATTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp TTTGAGATTGTGGCTACTTTCTTCATAGGGGCTGTGATGTCGGTGGGTAAGGACCACAGTGGGGCCCTCTaGCCGTGGCCGCAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: FEIVATFFIGAVMSVGKDHSGAL*PWPQPP
Trigger: TGGGGGCTGCGGCCACGGTCAGAGGGCCCCACTGTG...GTCCTTACCCACCGACATCACAGCCCCTATGAAGAAAGTAGCCACAATCTCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp ACCGGTCACCCGCGGGATGGGTCCACACCATTCCAGCGGCTCTCTCCACGGAAGAGCCGGAAGCTAACATaGAGGCAAAACACTCTGCAT +
Preference number: 4 (lower is better)
Translates to: TGHPRDGSTPFQRLSPRKSRKLT*RQNTLH
Trigger: ATGCAGAGTGTTTTGCCTTCATGTTAGCTTCCGGCT...CTTCCGTGGAGAGAGCCGCTGGAATGGTGTGGACCCATCCCGCGGGTGACCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp GGAGAACAGGCACCGGTCACCCGCGGGATGGGTCCACACCATTCCAGCGGCTCTAAGTGCGACCTCAAATaGCAACTTTCTCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GEQAPVTRGMGPHHSSGSKCDLK*QLSQVV
Trigger: CACCACCTGAGAAAGTTGTCATTTGAGGTCGCACTT...AGAGCCGCTGGAATGGTGTGGACCCATCCCGCGGGTGACCGGTGCCTGTTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp AGGAATAGCCAGGCAAGCCTCTGGGTGCCCGGTGATGCACTGTCTGAGGCACAGGCAGGTTTGGGTAGGTaGATAGTGCCATCACCTGCC +
Preference number: 4 (lower is better)
Translates to: RNSQASLWVPGDALSEAQAGLGR*IVPSPA
Trigger: GGCAGGTGATGGCACTATGCACCTACCCAAACCTGC...CTGTGCCTCAGACAGTGCATCACCGGGCACCCAGAGGCTTGCCTGGCTATTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp AGGCAGAGTCACGGGGGAGGCGAGTTCAGCCTGACGGGCATTGGGAGGAAGAGCAACTTTCTCAGGTGGTaGCTGGATAGGAAAGGCACC +
Preference number: 4 (lower is better)
Translates to: RQSHGGGEFSLTGIGRKSNFLRW*LDRKGT
Trigger: GGTGCCTTTCCTATCCAGGCACCACCTGAGAAAGTT...GCTCTTCCTCCCAATGCCCGTCAGGCTGAACTCGCCTCCCCCGTGACTCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp GCTAGGAAACCGACCAGATTCAGCTCGCCACCATTCAAGAAAGGACAGGGCCTTACACACAACGTGCGGTaGCTGGCAGCACGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: ARKPTRFSSPPFKKGQGLTHNVR*LAARPA
Trigger: AGCGGGCCGTGCTGCCAGGCACCGCACGTTGTGTGT...AAGGCCCTGTCCTTTCTTGAATGGTGGCGAGCTGAATCTGGTCGGTTTCCTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS-3UTR CCA 90 bp AGGCAGAGTCACGGGGGAGGCGAGTTCAGCCTGACGGGCATTGGGAGGAAGAGCTTTCTTAGCATCTTCTaGGAAGCTGGGGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: RQSHGGGEFSLTGIGRKSFLSIF*EAGAVQ
Trigger: CTGGACAGCCCCAGCTTCCCAGAAGATGCTAAGAAA...GCTCTTCCTCCCAATGCCCGTCAGGCTGAACTCGCCTCCCCCGTGACTCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp GCTAATGGCAGAGAAGCCGCATGCTGGGGGATGGCACCCTCCTGTACTGGGAGACGGGGATTGCCCTTGTaGGGAGGATATTTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: ANGREAACWGMAPSCTGRRGLPL*GGYFQP
Trigger: GGGCTGAAAATATCCTCCCCACAAGGGCAATCCCCG...TCTCCCAGTACAGGAGGGTGCCATCCCCCAGCATGCGGCTTCTCTGCCATTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp TCTCAGACGGGGTTCCAGCCTACGCATGTTCAAGGGAACCCCTCATTCCCAAAGCCGCATGCTGGGGGATaGCACCCTCCTGTACTGGGA +
Preference number: 4 (lower is better)
Translates to: SQTGFQPTHVQGNPSFPKPHAGG*HPPVLG
Trigger: TCCCAGTACAGGAGGGTGCCATCCCCCAGCATGCGG...CTTTGGGAATGAGGGGTTCCCTTGAACATGCGTAGGCTGGAACCCCGTCTGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp AGATTCAGCTCGCCACCATTCAAGAAAGGACAGGGCCTTGGCTGCTCGGCAGGTAGAGAAGCCGCATGCTaGGGGATGGCACCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: RFSSPPFKKGQGLGCSAGREAAC*GMAPSC
Trigger: ACAGGAGGGTGCCATCCCCCAGCATGCGGCTTCTCT...ACCTGCCGAGCAGCCAAGGCCCTGTCCTTTCTTGAATGGTGGCGAGCTGAATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp ACCGGTCACCCGCGGGATGGGTCCACACCATTCCAGCGGCTCTCTCCACGGAAGGTGGGTAAGGACAGTTaGGAGTTTCTGTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: TGHPRDGSTPFQRLSPRKVGKDS*EFLFPL
Trigger: CAGAGGAAACAGAAACTCCCAACTGTCCTTACCCAC...CTTCCGTGGAGAGAGCCGCTGGAATGGTGTGGACCCATCCCGCGGGTGACCGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp CCTTCCAGGCCCTTCTGTTCAAAGGACCGGATGCTTCACACCGCTAAGGGCTTTGGGAAGGACCCCAGCTaGGGCTGCTGCGGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: PSRPFCSKDRMLHTAKGFGKDPS*GCCGFS
Trigger: GGAAAAACCGCAGCAGCCCCAGCTGGGGTCCTTCCC...AAAGCCCTTAGCGGTGTGAAGCATCCGGTCCTTTGAACAGAAGGGCCTGGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS-3UTR TCA 90 bp GACACTGCCGGGCTGCACTATGTGTCACTGAAATTCAGGGAGACCTCTCAGACGACCTCCAACCACGACTaGCTCCTCCACGGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: DTAGLHYVSLKFRETSQTTSNHD*LLHGSQ
Trigger: TTGGCTGCCGTGGAGGAGTCAGTCGTGGTTGGAGGT...CGTCTGAGAGGTCTCCCTGAATTTCAGTGACACATAGTGCAGCCCGGCAGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp GCTAGGAAACCGACCAGATTCAGCTCGCCACCATTCAAGAAAGGACAGGGCCTTAGGCGAGCTCCACGTTaGTGGAGTACTCGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: ARKPTRFSSPPFKKGQGLRRAPR*WSTRAP
Trigger: TGGGGCCCGAGTACTCCAGCAACGTGGAGCTCGCCT...AAGGCCCTGTCCTTTCTTGAATGGTGGCGAGCTGAATCTGGTCGGTTTCCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp ATTCCAGCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCCCCTTGATCTCAGGGTaGAGGTTGATCACCTCCATG +
Preference number: 4 (lower is better)
Translates to: IPAALSTEVGHCRAALCVPLISG*RLITSM
Trigger: CATGGAGGTGATCAACCTGCACCCTGAGATCAAGGG...GACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGCTGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp AGGATGGGGAAGCTCCCAGTGAGGGAGGCGAGGGCTAAGCCCGTAGCACCGCAGTCTTCCCAGGCAAAGTaGATCACATCTTCTATGCAC +
Preference number: 4 (lower is better)
Translates to: RMGKLPVREARAKPVAPQSSQAK*ITSSMH
Trigger: GTGCATAGAAGATGTGATCCACTTTGCCTGGGAAGA...CTGCGGTGCTACGGGCTTAGCCCTCGCCTCCCTCACTGGGAGCTTCCCCATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp AGGATGGGGAAGCTCCCAGTGAGGGAGGCGAGGGCTAAGCCCGTAGCACCGCAGACCTTCTTGAAGGAGTaGAATCTGCAATCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: RMGKLPVREARAKPVAPQTFLKE*NLQSGE
Trigger: CTCTCCAGATTGCAGATTCCACTCCTTCAAGAAGGT...CTGCGGTGCTACGGGCTTAGCCCTCGCCTCCCTCACTGGGAGCTTCCCCATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp GGGATGGGTCCACACCATTCCAGCGGCTCTCTCCACGGAAGTGGGACACTGCCGGTGGGTAAGGACAGTTaGGAGTTTCTGTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GMGPHHSSGSLHGSGTLPVGKDS*EFLFPL
Trigger: CAGAGGAAACAGAAACTCCCAACTGTCCTTACCCAC...CGGCAGTGTCCCACTTCCGTGGAGAGAGCCGCTGGAATGGTGTGGACCCATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp AGGAATAGCCAGGCAAGCCTCTGGGTGCCCGGTGATGCACTGTCTGAGGCACAGTTCTCAGGTGGTGCCTaGATAGGAAAGGCACCGGAA +
Preference number: 4 (lower is better)
Translates to: RNSQASLWVPGDALSEAQFSGGA*IGKAPE
Trigger: TTCCGGTGCCTTTCCTATCCAGGCACCACCTGAGAA...CTGTGCCTCAGACAGTGCATCACCGGGCACCCAGAGGCTTGCCTGGCTATTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp ATTCCAGCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCTTCTCAGGTGGTGCCTaGATAGGAAAGGCACCGGAA +
Preference number: 4 (lower is better)
Translates to: IPAALSTEVGHCRAALCVFSGGA*IGKAPE
Trigger: TTCCGGTGCCTTTCCTATCCAGGCACCACCTGAGAA...GACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGCTGGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp AGATTCAGCTCGCCACCATTCAAGAAAGGACAGGGCCTTGGCTGCTCGGCAGGTCGTTTTAGCCAGGCTTaGCTGACTGAGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: RFSSPPFKKGQGLGCSAGRFSQA*LTEELA
Trigger: GGCCAGCTCCTCAGTCAGCCAAGCCTGGCTAAAACG...ACCTGCCGAGCAGCCAAGGCCCTGTCCTTTCTTGAATGGTGGCGAGCTGAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS-3UTR TCA 90 bp TTTGAGATTGTGGCTACTTTCTTCATAGGGGCTGTGATGTCGGTGGGTAAGGACTCATGGACTCCAGCGTaGGGATGCGCTCGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: FEIVATFFIGAVMSVGKDSWTPA*GCARAG
Trigger: GCCGGCGCGAGCGCATCCTCACGCTGGAGTCCATGA...GTCCTTACCCACCGACATCACAGCCCCTATGAAGAAAGTAGCCACAATCTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp ATTCAGAGAACCCTGGTCACACCTGCTGAGCAGGTCCCCTCTACTCTGGTTGCACGCCATCCCTCCTGGTaGTGTAGGCAGCCACATCTT +
Preference number: 4 (lower is better)
Translates to: IQRTLVTPAEQVPSTLVARHPSW*CRQPHL
Trigger: AAGATGTGGCTGCCTACATCACCAGGAGGGATGGCG...TGCAACCAGAGTAGAGGGGACCTGCTCAGCAGGTGTGACCAGGGTTCTCTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp AGATTCAGCTCGCCACCATTCAAGAAAGGACAGGGCCTTGGCTGCTCGGCAGGTCAGCTTTGGCAGGAATaGAGATCCGAGGGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: RFSSPPFKKGQGLGCSAGQLWQE*RSEGRR
Trigger: ACGCCTTCCCTCGGATCTTCATTCCTGCCAAAGCTG...ACCTGCCGAGCAGCCAAGGCCCTGTCCTTTCTTGAATGGTGGCGAGCTGAATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp CAACATCCTGCCCAGTCCACGTGCTACTGCGCTCCCGGCGCCTGCCTCCAGGCCGTTGTAAACCCCAAATaGACTTTCCAGAAGCAAAAA +
Preference number: 4 (lower is better)
Translates to: QHPAQSTCYCAPGACLQAVVNPK*TFQKQK
Trigger: TTTTTGCTTCTGGAAAGTTCATTTGGGGTTTACAAC...GGCCTGGAGGCAGGCGCCGGGAGCGCAGTAGCACGTGGACTGGGCAGGATGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp GCTAGGAAACCGACCAGATTCAGCTCGCCACCATTCAAGAAAGGACAGGGCCTTACCTCCAACCACGACTaGCTCCTCCACGGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: ARKPTRFSSPPFKKGQGLTSNHD*LLHGSQ
Trigger: TTGGCTGCCGTGGAGGAGTCAGTCGTGGTTGGAGGT...AAGGCCCTGTCCTTTCTTGAATGGTGGCGAGCTGAATCTGGTCGGTTTCCTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp AGGCAGAGTCACGGGGGAGGCGAGTTCAGCCTGACGGGCATTGGGAGGAAGAGCGGCCCGCTCAACAATTaGCGAATTCAATTCAACAAG +
Preference number: 4 (lower is better)
Translates to: RQSHGGGEFSLTGIGRKSGPLNN*RIQFNK
Trigger: CTTGTTGAATTGAATTCGTCAATTGTTGAGCGGGCC...GCTCTTCCTCCCAATGCCCGTCAGGCTGAACTCGCCTCCCCCGTGACTCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS-3UTR GCA 90 bp AGATTCAGCTCGCCACCATTCAAGAAAGGACAGGGCCTTGGCTGCTCGGCAGGTCATAGTGCCATCACCTaGCGGAGGAAGGTGATTGGC +
Preference number: 4 (lower is better)
Translates to: RFSSPPFKKGQGLGCSAGHSAIT*RRKVIG
Trigger: GCCAATCACCTTCCTCCGGCAGGTGATGGCACTATG...ACCTGCCGAGCAGCCAAGGCCCTGTCCTTTCTTGAATGGTGGCGAGCTGAATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp AGATTCAGCTCGCCACCATTCAAGAAAGGACAGGGCCTTGGCTGCTCGGCAGGTCCCCCTGCAAGGGGTTaGAGTGAATTCCTGGGACTT +
Preference number: 4 (lower is better)
Translates to: RFSSPPFKKGQGLGCSAGPPARG*SEFLGL
Trigger: AAGTCCCAGGAATTCACTGCAACCCCTTGCAGGGGG...ACCTGCCGAGCAGCCAAGGCCCTGTCCTTTCTTGAATGGTGGCGAGCTGAATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp GCTAATGGCAGAGAAGCCGCATGCTGGGGGATGGCACCCTCCTGTACTGGGAGACCTCCAGGAGCTTCATaGAGTAGAACATGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: ANGREAACWGMAPSCTGRPPGAS*SRTCLE
Trigger: CTCCAGACATGTTCTACTGCATGAAGCTCCTGGAGG...TCTCCCAGTACAGGAGGGTGCCATCCCCCAGCATGCGGCTTCTCTGCCATTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp AGATTCAGCTCGCCACCATTCAAGAAAGGACAGGGCCTTGGCTGCTCGGCAGGTCTCCTCGGCCTCTTCTaGTTTCTCTCCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RFSSPPFKKGQGLGCSAGLLGLF*FLSSFS
Trigger: GGAGAAGCTGGAGAGAAAGCAGAAGAGGCCGAGGAG...ACCTGCCGAGCAGCCAAGGCCCTGTCCTTTCTTGAATGGTGGCGAGCTGAATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp CACCATTCCAGCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGCTTCCTCAGCACATaGTACACACACAGATCTGGA +
Preference number: 4 (lower is better)
Translates to: HHSSGSLHGSGTLPGCTMCFLST*YTHRSG
Trigger: TCCAGATCTGTGTGTGTAGCATGTGCTGAGGAAGCA...CATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGCTGGAATGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp AGGAATAGCCAGGCAAGCCTCTGGGTGCCCGGTGATGCACTGTCTGAGGCACAGACAAGTGAACCGTATTaGAAGGCCTCACTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: RNSQASLWVPGDALSEAQTSEPY*KASLSA
Trigger: GGCACTCAGTGAGGCCTTGCAATACGGTTCACTTGT...CTGTGCCTCAGACAGTGCATCACCGGGCACCCAGAGGCTTGCCTGGCTATTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS-3UTR GCA 90 bp GATTTCCAGCCCTCACCACGGTTAAGTCACACATTTCCCGACACCTGCTCATTTGGCAGACACACAACGTaGGGTGCCTGGCAGCACGGC +
Preference number: 4 (lower is better)
Translates to: DFQPSPRLSHTFPDTCSFGRHTT*GAWQHG
Trigger: GCCGTGCTGCCAGGCACCGCACGTTGTGTGTCTGCC...AAATGAGCAGGTGTCGGGAAATGTGTGACTTAACCGTGGTGAGGGCTGGAAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS-3UTR CCA 90 bp CCTTCCAGGCCCTTCTGTTCAAAGGACCGGATGCTTCACACCGCTAAGGGCTTTAGCAGCTTCACCAGCTaGCCCTTGATCTCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: PSRPFCSKDRMLHTAKGFSSFTS*PLISGC
Trigger: GCACCCTGAGATCAAGGGCCAGCTGGTGAAGCTGCT...AAAGCCCTTAGCGGTGTGAAGCATCCGGTCCTTTGAACAGAAGGGCCTGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp TTTGAGATTGTGGCTACTTTCTTCATAGGGGCTGTGATGTCGGTGGGTAAGGACGGACAGGTCTCCCGCTaGGGCTCAGGCGTCCTCACG +
Preference number: 4 (lower is better)
Translates to: FEIVATFFIGAVMSVGKDGQVSR*GSGVLT
Trigger: CGTGAGGACGCCTGAGCCCCAGCGGGAGACCTGTCC...GTCCTTACCCACCGACATCACAGCCCCTATGAAGAAAGTAGCCACAATCTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp ATTCAGAGAACCCTGGTCACACCTGCTGAGCAGGTCCCCTCTACTCTGGTTGCAGGCACCCTCCTGTACTaGGAGAAGCCTGATGCCACA +
Preference number: 4 (lower is better)
Translates to: IQRTLVTPAEQVPSTLVAGTLLY*EKPDAT
Trigger: TGTGGCATCAGGCTTCTCCCAGTACAGGAGGGTGCC...TGCAACCAGAGTAGAGGGGACCTGCTCAGCAGGTGTGACCAGGGTTCTCTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp GCTAATGGCAGAGAAGCCGCATGCTGGGGGATGGCACCCTCCTGTACTGGGAGACTCAGAGATGACAGCTaGATAGAGGGGATATTGTGG +
Preference number: 4 (lower is better)
Translates to: ANGREAACWGMAPSCTGRLRDDS*IEGILW
Trigger: CCACAATATCCCCTCTATTCAGCTGTCATCTCTGAG...TCTCCCAGTACAGGAGGGTGCCATCCCCCAGCATGCGGCTTCTCTGCCATTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp AGATTCAGCTCGCCACCATTCAAGAAAGGACAGGGCCTTGGCTGCTCGGCAGGTCGTCGAGCTCAGAGATaGCAGCTGAATAGAGGGGAT +
Preference number: 4 (lower is better)
Translates to: RFSSPPFKKGQGLGCSAGRRAQR*QLNRGD
Trigger: ATCCCCTCTATTCAGCTGTCATCTCTGAGCTCGACG...ACCTGCCGAGCAGCCAAGGCCCTGTCCTTTCTTGAATGGTGGCGAGCTGAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp ATTCCAGCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCCGTACAGCACCTTCTTaGAGGAGTGGAATCTGCAAT +
Preference number: 4 (lower is better)
Translates to: IPAALSTEVGHCRAALCVRTAPS*RSGICN
Trigger: ATTGCAGATTCCACTCCTTCAAGAAGGTGCTGTACG...GACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGCTGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp GACACTGCCGGGCTGCACTATGTGTCACTGAAATTCAGGGAGACCTCTCAGACGTCTCAGGGTGCAGGTTaGTCACCTCCATGTAGCCTC +
Preference number: 4 (lower is better)
Translates to: DTAGLHYVSLKFRETSQTSQGAG*SPPCSL
Trigger: GAGGCTACATGGAGGTGATCAACCTGCACCCTGAGA...CGTCTGAGAGGTCTCCCTGAATTTCAGTGACACATAGTGCAGCCCGGCAGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp CTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACTGAAATTCAGCAGCTTTGGCAGGAATaGAGATCCGAGGGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: LSTEVGHCRAALCVTEIQQLWQE*RSEGRR
Trigger: ACGCCTTCCCTCGGATCTTCATTCCTGCCAAAGCTG...CTGAATTTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp GCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACTGAAAAGTGCGACCTCAAATaGCAACTTTCTCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: AALSTEVGHCRAALCVTEKCDLK*QLSQVV
Trigger: CACCACCTGAGAAAGTTGTCATTTGAGGTCGCACTT...TTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp GGAGAACAGGCACCGGTCACCCGCGGGATGGGTCCACACCATTCCAGCGGCTCTTATAGAATGCTTGTTTaGTCAAAAGAGAGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: GEQAPVTRGMGPHHSSGSYRMLV*SKERRS
Trigger: AGAGCGCCTCTCTTTTGAGCAAACAAGCATTCTATA...AGAGCCGCTGGAATGGTGTGGACCCATCCCGCGGGTGACCGGTGCCTGTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp AGATTCAGCTCGCCACCATTCAAGAAAGGACAGGGCCTTGGCTGCTCGGCAGGTGTTCAAAGGACCGGATaGTTCACACCGCTAAGGGCT +
Preference number: 4 (lower is better)
Translates to: RFSSPPFKKGQGLGCSAGVQRTG*FTPLRA
Trigger: AGCCCTTAGCGGTGTGAAGCATCCGGTCCTTTGAAC...ACCTGCCGAGCAGCCAAGGCCCTGTCCTTTCTTGAATGGTGGCGAGCTGAATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp GACACTGCCGGGCTGCACTATGTGTCACTGAAATTCAGGGAGACCTCTCAGACGCTCCTCGGCCTCTTCTaGTTTCTCTCCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: DTAGLHYVSLKFRETSQTLLGLF*FLSSFS
Trigger: GGAGAAGCTGGAGAGAAAGCAGAAGAGGCCGAGGAG...CGTCTGAGAGGTCTCCCTGAATTTCAGTGACACATAGTGCAGCCCGGCAGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp TCTCAGACGGGGTTCCAGCCTACGCATGTTCAAGGGAACCCCTCATTCCCAAAGTCACTGAGTGCCCGGTaGTGGGCACCAGTAAGTGAA +
Preference number: 4 (lower is better)
Translates to: SQTGFQPTHVQGNPSFPKSLSAR*WAPVSE
Trigger: TTCACTTACTGGTGCCCAGCACCGGGCACTCAGTGA...CTTTGGGAATGAGGGGTTCCCTTGAACATGCGTAGGCTGGAACCCCGTCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS-3UTR CCA 90 bp GCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACTGAAGTGGAATCTGCAATCTaGAGAGTACACGTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: AALSTEVGHCRAALCVTEVESAI*RVHVVL
Trigger: CAGGACAACGTGTACTCTCCAGATTGCAGATTCCAC...TTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp CACCATTCCAGCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGGTTGCAGTGAATTCCTaGGACTTGGTTAAACAGGTC +
Preference number: 4 (lower is better)
Translates to: HHSSGSLHGSGTLPGCTMVAVNS*DLVKQV
Trigger: GACCTGTTTAACCAAGTCCCAGGAATTCACTGCAAC...CATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGCTGGAATGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp ATTCAGAGAACCCTGGTCACACCTGCTGAGCAGGTCCCCTCTACTCTGGTTGCATCTCCAATCCCATTTTaGGACATGCGGGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: IQRTLVTPAEQVPSTLVASPIPF*DMRGPR
Trigger: CCTGGGACCCCGCATGTCCCAAAATGGGATTGGAGA...TGCAACCAGAGTAGAGGGGACCTGCTCAGCAGGTGTGACCAGGGTTCTCTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp CTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACTGAAATTCAGTGCACGGACCCGGTGTaGAAATCACAGCATAGAGGC +
Preference number: 4 (lower is better)
Translates to: LSTEVGHCRAALCVTEIQCTDPV*KSQHRG
Trigger: GCCTCTATGCTGTGATTTCCACACCGGGTCCGTGCA...CTGAATTTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp TCTCAGACGGGGTTCCAGCCTACGCATGTTCAAGGGAACCCCTCATTCCCAAAGTGCACGGACCCGGTGTaGAAATCACAGCATAGAGGC +
Preference number: 4 (lower is better)
Translates to: SQTGFQPTHVQGNPSFPKCTDPV*KSQHRG
Trigger: GCCTCTATGCTGTGATTTCCACACCGGGTCCGTGCA...CTTTGGGAATGAGGGGTTCCCTTGAACATGCGTAGGCTGGAACCCCGTCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp GCTCAAAAGAGAGGCGCTCTCAACATCAAGGCACAAAGAAAGACGTCTCCAGGGGACCACAGAAGTGGCTaGTCGGCCAAGGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: AQKRGALNIKAQRKTSPGDHRSG*SAKAPE
Trigger: CTCTGGAGCCTTGGCCGACCAGCCACTTCTGTGGTC...CCCTGGAGACGTCTTTCTTTGTGCCTTGATGTTGAGAGCGCCTCTCTTTTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS-3UTR CCA 90 bp ATTCCAGCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCTCTTCCCAGGCAAAGTaGATCACATCTTCTATGCAC +
Preference number: 4 (lower is better)
Translates to: IPAALSTEVGHCRAALCVSSQAK*ITSSMH
Trigger: GTGCATAGAAGATGTGATCCACTTTGCCTGGGAAGA...GACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGCTGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp GACACTGCCGGGCTGCACTATGTGTCACTGAAATTCAGGGAGACCTCTCAGACGGAGTACACGTTGTCCTaGTACACCTCATCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: DTAGLHYVSLKFRETSQTEYTLS*YTSSAR
Trigger: CCTGGCTGATGAGGTGTACCAGGACAACGTGTACTC...CGTCTGAGAGGTCTCCCTGAATTTCAGTGACACATAGTGCAGCCCGGCAGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp GCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACTGAAGTTGCAGTGAATTCCTaGGACTTGGTTAAACAGGTC +
Preference number: 4 (lower is better)
Translates to: AALSTEVGHCRAALCVTEVAVNS*DLVKQV
Trigger: GACCTGTTTAACCAAGTCCCAGGAATTCACTGCAAC...TTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp AGATTCAGCTCGCCACCATTCAAGAAAGGACAGGGCCTTGGCTGCTCGGCAGGTGCAGTAGAACATGTCTaGAGCCATTTGATGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RFSSPPFKKGQGLGCSAGAVEHV*SHLMGL
Trigger: CAGGCCCATCAAATGGCTCCAGACATGTTCTACTGC...ACCTGCCGAGCAGCCAAGGCCCTGTCCTTTCTTGAATGGTGGCGAGCTGAATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp ATTCCAGCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCAGGTCCCCTCTACTCTaGTTGCATATAGAATGCTTG +
Preference number: 4 (lower is better)
Translates to: IPAALSTEVGHCRAALCVRSPLL*LHIECL
Trigger: CAAGCATTCTATATGCAACCAGAGTAGAGGGGACCT...GACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGCTGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp TTTGAGATTGTGGCTACTTTCTTCATAGGGGCTGTGATGTCGGTGGGTAAGGACAGCCAGGCAAGCCTCTaGGTGCCCGGTGATGCACTG +
Preference number: 4 (lower is better)
Translates to: FEIVATFFIGAVMSVGKDSQASL*VPGDAL
Trigger: CAGTGCATCACCGGGCACCCAGAGGCTTGCCTGGCT...GTCCTTACCCACCGACATCACAGCCCCTATGAAGAAAGTAGCCACAATCTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp CTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACTGAAATTCAGTGTTCCTCTCTCCACTaGACCTTGGTTCCACGAGAG +
Preference number: 4 (lower is better)
Translates to: LSTEVGHCRAALCVTEIQCSSLH*TLVPRE
Trigger: CTCTCGTGGAACCAAGGTCCAGTGGAGAGAGGAACA...CTGAATTTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS-3UTR CCA 90 bp GCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACTGAAGATGACCTCTGTGAATaGCTTTTTGATACCCTCGGT +
Preference number: 4 (lower is better)
Translates to: AALSTEVGHCRAALCVTEDDLCE*LFDTLG
Trigger: ACCGAGGGTATCAAAAAGCCATTCACAGAGGTCATC...TTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS-3UTR TCA 90 bp GCTAGGAAACCGACCAGATTCAGCTCGCCACCATTCAAGAAAGGACAGGGCCTTCGTCGAGCTCAGAGATaGCAGCTGAATAGAGGGGAT +
Preference number: 4 (lower is better)
Translates to: ARKPTRFSSPPFKKGQGLRRAQR*QLNRGD
Trigger: ATCCCCTCTATTCAGCTGTCATCTCTGAGCTCGACG...AAGGCCCTGTCCTTTCTTGAATGGTGGCGAGCTGAATCTGGTCGGTTTCCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp CTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACTGAAATTCAGTGCAAGGGGTTGCAGTaGATTCCTGGGACTTGGTTA +
Preference number: 4 (lower is better)
Translates to: LSTEVGHCRAALCVTEIQCKGLQ*IPGTWL
Trigger: TAACCAAGTCCCAGGAATTCACTGCAACCCCTTGCA...CTGAATTTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp CTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACTGAAATTCAGAAAACAGCCACAGGTTaGTCTGCATCTGTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: LSTEVGHCRAALCVTEIQKTATG*SASVPP
Trigger: GGGAGGAACAGATGCAGATCAACCTGTGGCTGTTTT...CTGAATTTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp TCTACTCTGGTTGCATATAGAATGCTTGTTTGCTCAAAAGAGAGGCGCTCTCAAGTGACCAGCGGCCTCTaGGAGGCCCGAGGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: STLVAYRMLVCSKERRSQVTSGL*EARGRV
Trigger: GACTCTGCCTCGGGCCTCGCAGAGGCCGCTGGTCAC...TTGAGAGCGCCTCTCTTTTGAGCAAACAAGCATTCTATATGCAACCAGAGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp TCTACTCTGGTTGCATATAGAATGCTTGTTTGCTCAAAAGAGAGGCGCTCTCAATGGTCTTTGGCCTCCTaGACCGCCCGCCGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: STLVAYRMLVCSKERRSQWSLAS*TARRSS
Trigger: TGAGCTCCGGCGGGCGGTGCAGGAGGCCAAAGACCA...TTGAGAGCGCCTCTCTTTTGAGCAAACAAGCATTCTATATGCAACCAGAGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp GCTAATGGCAGAGAAGCCGCATGCTGGGGGATGGCACCCTCCTGTACTGGGAGAGGATCACATCTTCTATaGACTTTCTGCTTTGTACCT +
Preference number: 4 (lower is better)
Translates to: ANGREAACWGMAPSCTGRGSHLL*TFCFVP
Trigger: AGGTACAAAGCAGAAAGTGCATAGAAGATGTGATCC...TCTCCCAGTACAGGAGGGTGCCATCCCCCAGCATGCGGCTTCTCTGCCATTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp CCTTCCAGGCCCTTCTGTTCAAAGGACCGGATGCTTCACACCGCTAAGGGCTTTTTCTCTCGGCTGAATTaGTCAAAGGACTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: PSRPFCSKDRMLHTAKGFFSRLN*SKDSSP
Trigger: AGGAGAGGAGTCCTTTGAGCAATTCAGCCGAGAGAA...AAAGCCCTTAGCGGTGTGAAGCATCCGGTCCTTTGAACAGAAGGGCCTGGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp GATTTCCAGCCCTCACCACGGTTAAGTCACACATTTCCCGACACCTGCTCATTTGCTAGTGCAACATCCTaGCCAGTCCACGTGCTACTG +
Preference number: 4 (lower is better)
Translates to: DFQPSPRLSHTFPDTCSFASATS*PVHVLL
Trigger: CAGTAGCACGTGGACTGGGCAGGATGTTGCACTAGC...AAATGAGCAGGTGTCGGGAAATGTGTGACTTAACCGTGGTGAGGGCTGGAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp TCTACTCTGGTTGCATATAGAATGCTTGTTTGCTCAAAAGAGAGGCGCTCTCAACAGCAGGGGGCGATGTaGTCACAGGCTCGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: STLVAYRMLVCSKERRSQQQGAM*SQARSG
Trigger: CCCTGACCGAGCCTGTGAGCACATCGCCCCCTGCTG...TTGAGAGCGCCTCTCTTTTGAGCAAACAAGCATTCTATATGCAACCAGAGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp TTTGAGATTGTGGCTACTTTCTTCATAGGGGCTGTGATGTCGGTGGGTAAGGACCCACGGCAGCCAAGCTaGCAGGCACTTTTACCACCT +
Preference number: 4 (lower is better)
Translates to: FEIVATFFIGAVMSVGKDPRQPS*QALLPP
Trigger: AGGTGGTAAAAGTGCCTGGCAGCTTGGCTGCCGTGG...GTCCTTACCCACCGACATCACAGCCCCTATGAAGAAAGTAGCCACAATCTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp GATTTCCAGCCCTCACCACGGTTAAGTCACACATTTCCCGACACCTGCTCATTTTTTCTGCTTTGTACCTaGCCTGTGGGGTTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: DFQPSPRLSHTFPDTCSFFLLCT*PVGFPG
Trigger: CCCTGGGAACCCCACAGGCCAGGTACAAAGCAGAAA...AAATGAGCAGGTGTCGGGAAATGTGTGACTTAACCGTGGTGAGGGCTGGAAATC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp CTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACTGAAATTCAGGTGGAATCTGCAATCTaGAGAGTACACGTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: LSTEVGHCRAALCVTEIQVESAI*RVHVVL
Trigger: CAGGACAACGTGTACTCTCCAGATTGCAGATTCCAC...CTGAATTTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp TTTGAGATTGTGGCTACTTTCTTCATAGGGGCTGTGATGTCGGTGGGTAAGGACTCACGACAATGTCCATaGCGGCCTGCCCAGACACTG +
Preference number: 4 (lower is better)
Translates to: FEIVATFFIGAVMSVGKDSRQCP*RPAQTL
Trigger: CAGTGTCTGGGCAGGCCGCCATGGACATTGTCGTGA...GTCCTTACCCACCGACATCACAGCCCCTATGAAGAAAGTAGCCACAATCTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp TTTGAGATTGTGGCTACTTTCTTCATAGGGGCTGTGATGTCGGTGGGTAAGGACAAAATGATGACGAAGTaGCCAGCGGCCTCTGCGAGG +
Preference number: 4 (lower is better)
Translates to: FEIVATFFIGAVMSVGKDKMMTK*PAASAR
Trigger: CCTCGCAGAGGCCGCTGGTCACTTCGTCATCATTTT...GTCCTTACCCACCGACATCACAGCCCCTATGAAGAAAGTAGCCACAATCTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp GCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACTGAAGTTGTAAACCCCAAATaGACTTTCCAGAAGCAAAAA +
Preference number: 4 (lower is better)
Translates to: AALSTEVGHCRAALCVTEVVNPK*TFQKQK
Trigger: TTTTTGCTTCTGGAAAGTTCATTTGGGGTTTACAAC...TTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp GCTAGGAAACCGACCAGATTCAGCTCGCCACCATTCAAGAAAGGACAGGGCCTTTGCACTATGTGTCACTaGAATTCAGGGAGACCTCTC +
Preference number: 4 (lower is better)
Translates to: ARKPTRFSSPPFKKGQGLCTMCH*NSGRPL
Trigger: GAGAGGTCTCCCTGAATTTCAGTGACACATAGTGCA...AAGGCCCTGTCCTTTCTTGAATGGTGGCGAGCTGAATCTGGTCGGTTTCCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp GCTAGGAAACCGACCAGATTCAGCTCGCCACCATTCAAGAAAGGACAGGGCCTTGCAAAACACTCTGCATaGAAGCACGGCAATGAACCT +
Preference number: 4 (lower is better)
Translates to: ARKPTRFSSPPFKKGQGLAKHSA*KHGNEP
Trigger: AGGTTCATTGCCGTGCTTTCATGCAGAGTGTTTTGC...AAGGCCCTGTCCTTTCTTGAATGGTGGCGAGCTGAATCTGGTCGGTTTCCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp CCTTCCAGGCCCTTCTGTTCAAAGGACCGGATGCTTCACACCGCTAAGGGCTTTAAGTCTTTCACCTTCTaGAGCACCGTTTTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PSRPFCSKDRMLHTAKGFKSFTF*STVFSF
Trigger: GAAGCTGAAAACGGTGCTGCAGAAGGTGAAAGACTT...AAAGCCCTTAGCGGTGTGAAGCATCCGGTCCTTTGAACAGAAGGGCCTGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp GACACTGCCGGGCTGCACTATGTGTCACTGAAATTCAGGGAGACCTCTCAGACGAAGTCTTTCACCTTCTaGAGCACCGTTTTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: DTAGLHYVSLKFRETSQTKSFTF*STVFSF
Trigger: GAAGCTGAAAACGGTGCTGCAGAAGGTGAAAGACTT...CGTCTGAGAGGTCTCCCTGAATTTCAGTGACACATAGTGCAGCCCGGCAGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp GCTCAAAAGAGAGGCGCTCTCAACATCAAGGCACAAAGAAAGACGTCTCCAGGGTTTCTTAGCATCTTCTaGGAAGCTGGGGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: AQKRGALNIKAQRKTSPGFLSIF*EAGAVQ
Trigger: CTGGACAGCCCCAGCTTCCCAGAAGATGCTAAGAAA...CCCTGGAGACGTCTTTCTTTGTGCCTTGATGTTGAGAGCGCCTCTCTTTTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp CTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACTGAAATTCAGAGGTCCCCTCTACTCTaGTTGCATATAGAATGCTTG +
Preference number: 4 (lower is better)
Translates to: LSTEVGHCRAALCVTEIQRSPLL*LHIECL
Trigger: CAAGCATTCTATATGCAACCAGAGTAGAGGGGACCT...CTGAATTTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp GCTAGGAAACCGACCAGATTCAGCTCGCCACCATTCAAGAAAGGACAGGGCCTTAAACCAAACCTATCATaGTCAGCATTCCTACCCGAC +
Preference number: 4 (lower is better)
Translates to: ARKPTRFSSPPFKKGQGLKPNLS*SAFLPD
Trigger: GTCGGGTAGGAATGCTGATCATGATAGGTTTGGTTT...AAGGCCCTGTCCTTTCTTGAATGGTGGCGAGCTGAATCTGGTCGGTTTCCTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp ATTCAGAGAACCCTGGTCACACCTGCTGAGCAGGTCCCCTCTACTCTGGTTGCAACAGATCTGGACGAATaGCAGAAACTTCACAGATGT +
Preference number: 4 (lower is better)
Translates to: IQRTLVTPAEQVPSTLVATDLDE*QKLHRC
Trigger: ACATCTGTGAAGTTTCTGTCATTCGTCCAGATCTGT...TGCAACCAGAGTAGAGGGGACCTGCTCAGCAGGTGTGACCAGGGTTCTCTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp CCTTCCAGGCCCTTCTGTTCAAAGGACCGGATGCTTCACACCGCTAAGGGCTTTACAGATCTGGACGAATaGCAGAAACTTCACAGATGT +
Preference number: 4 (lower is better)
Translates to: PSRPFCSKDRMLHTAKGFTDLDE*QKLHRC
Trigger: ACATCTGTGAAGTTTCTGTCATTCGTCCAGATCTGT...AAAGCCCTTAGCGGTGTGAAGCATCCGGTCCTTTGAACAGAAGGGCCTGGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp TTTGAGATTGTGGCTACTTTCTTCATAGGGGCTGTGATGTCGGTGGGTAAGGACTTTTTGATACCCCGCTaGAGCTCGAGCTCGATCTCG +
Preference number: 4 (lower is better)
Translates to: FEIVATFFIGAVMSVGKDFLIPR*SSSSIS
Trigger: CGAGATCGAGCTCGAGCTGCAGCGGGGTATCAAAAA...GTCCTTACCCACCGACATCACAGCCCCTATGAAGAAAGTAGCCACAATCTCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340124.9
CDS-3UTR GCA 90 bp GATTTCCAGCCCTCACCACGGTTAAGTCACACATTTCCCGACACCTGCTCATTTAGTTTCTGTTTCCTCTaGACGGACCCGGTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: DFQPSPRLSHTFPDTCSFSFCFL*TDPVWK
Trigger: TTTCCACACCGGGTCCGTGCAGAGGAAACAGAAACT...AAATGAGCAGGTGTCGGGAAATGTGTGACTTAACCGTGGTGAGGGCTGGAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp ATTCAGAGAACCCTGGTCACACCTGCTGAGCAGGTCCCCTCTACTCTGGTTGCACTACACACACAGATCTaGACGAATGACAGAAACTTC +
Preference number: 4 (lower is better)
Translates to: IQRTLVTPAEQVPSTLVALHTQI*TNDRNF
Trigger: GAAGTTTCTGTCATTCGTCCAGATCTGTGTGTGTAG...TGCAACCAGAGTAGAGGGGACCTGCTCAGCAGGTGTGACCAGGGTTCTCTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR CAA 72 bp TGGTCACACCTGCTGAGCAGGTCCCCTCTACTCTGGTaGCATATAGAATGCTTGTTTGCTCAAAAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: WSHLLSRSPLLW*HIECLFAQKRG
Trigger: GCCTCTCTTTTGAGCAAACAAGCATTCTATATGCAACCAGAGTAGAGGGGACCTGCTCAGCAGGTGTGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp TTTGAGATTGTGGCTACTTTCTTCATAGGGGCTGTGATGTCGGTGGGTAAGGACACTCCTTCTCTCGGCTaGATTGCTCAAAGGACTCCT +
Preference number: 4 (lower is better)
Translates to: FEIVATFFIGAVMSVGKDTPSLG*IAQRTP
Trigger: AGGAGTCCTTTGAGCAATTCAGCCGAGAGAAGGAGT...GTCCTTACCCACCGACATCACAGCCCCTATGAAGAAAGTAGCCACAATCTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp GCTCAAAAGAGAGGCGCTCTCAACATCAAGGCACAAAGAAAGACGTCTCCAGGGACTTCTCCAGGAAGTTaGTGTGGAAGTCTTTCACCT +
Preference number: 4 (lower is better)
Translates to: AQKRGALNIKAQRKTSPGTSPGS*CGSLSP
Trigger: AGGTGAAAGACTTCCACATCAACTTCCTGGAGAAGT...CCCTGGAGACGTCTTTCTTTGTGCCTTGATGTTGAGAGCGCCTCTCTTTTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp GATTTCCAGCCCTCACCACGGTTAAGTCACACATTTCCCGACACCTGCTCATTTGCAAAACACTCTGCATaGAAGCACGGCAATGAACCT +
Preference number: 4 (lower is better)
Translates to: DFQPSPRLSHTFPDTCSFAKHSA*KHGNEP
Trigger: AGGTTCATTGCCGTGCTTTCATGCAGAGTGTTTTGC...AAATGAGCAGGTGTCGGGAAATGTGTGACTTAACCGTGGTGAGGGCTGGAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp GACACTGCCGGGCTGCACTATGTGTCACTGAAATTCAGGGAGACCTCTCAGACGGGATCACATCTTCTATaGACTTTCTGCTTTGTACCT +
Preference number: 4 (lower is better)
Translates to: DTAGLHYVSLKFRETSQTGSHLL*TFCFVP
Trigger: AGGTACAAAGCAGAAAGTGCATAGAAGATGTGATCC...CGTCTGAGAGGTCTCCCTGAATTTCAGTGACACATAGTGCAGCCCGGCAGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp CTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACTGAAATTCAGTATAGAATGCTTGTTTaGTCAAAAGAGAGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: LSTEVGHCRAALCVTEIQYRMLV*SKERRS
Trigger: AGAGCGCCTCTCTTTTGAGCAAACAAGCATTCTATA...CTGAATTTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp TCTACTCTGGTTGCATATAGAATGCTTGTTTGCTCAAAAGAGAGGCGCTCTCAACCACGGCAGCCAAGCTaGCAGGCACTTTTACCACCT +
Preference number: 4 (lower is better)
Translates to: STLVAYRMLVCSKERRSQPRQPS*QALLPP
Trigger: AGGTGGTAAAAGTGCCTGGCAGCTTGGCTGCCGTGG...TTGAGAGCGCCTCTCTTTTGAGCAAACAAGCATTCTATATGCAACCAGAGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp TTTGAGATTGTGGCTACTTTCTTCATAGGGGCTGTGATGTCGGTGGGTAAGGACAGCCACAGGTTGATCTaGATCTGTTCCTCCCCAACA +
Preference number: 4 (lower is better)
Translates to: FEIVATFFIGAVMSVGKDSHRLI*ICSSPT
Trigger: TGTTGGGGAGGAACAGATGCAGATCAACCTGTGGCT...GTCCTTACCCACCGACATCACAGCCCCTATGAAGAAAGTAGCCACAATCTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp TTTGAGATTGTGGCTACTTTCTTCATAGGGGCTGTGATGTCGGTGGGTAAGGACGCAGTAGAACATGTCTaGAGCCATTTGATGGGCCTG +
Preference number: 4 (lower is better)
Translates to: FEIVATFFIGAVMSVGKDAVEHV*SHLMGL
Trigger: CAGGCCCATCAAATGGCTCCAGACATGTTCTACTGC...GTCCTTACCCACCGACATCACAGCCCCTATGAAGAAAGTAGCCACAATCTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp TTTGAGATTGTGGCTACTTTCTTCATAGGGGCTGTGATGTCGGTGGGTAAGGACAGCCGGAAGCTAACATaGAGGCAAAACACTCTGCAT +
Preference number: 4 (lower is better)
Translates to: FEIVATFFIGAVMSVGKDSRKLT*RQNTLH
Trigger: ATGCAGAGTGTTTTGCCTTCATGTTAGCTTCCGGCT...GTCCTTACCCACCGACATCACAGCCCCTATGAAGAAAGTAGCCACAATCTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp GATTTCCAGCCCTCACCACGGTTAAGTCACACATTTCCCGACACCTGCTCATTTAAACCAAACCTATCATaGTCAGCATTCCTACCCGAC +
Preference number: 4 (lower is better)
Translates to: DFQPSPRLSHTFPDTCSFKPNLS*SAFLPD
Trigger: GTCGGGTAGGAATGCTGATCATGATAGGTTTGGTTT...AAATGAGCAGGTGTCGGGAAATGTGTGACTTAACCGTGGTGAGGGCTGGAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp TTTGAGATTGTGGCTACTTTCTTCATAGGGGCTGTGATGTCGGTGGGTAAGGACCTTCTATGCACTTTCTaGTTTGTACCTGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: FEIVATFFIGAVMSVGKDLLCTF*FVPGLW
Trigger: CCACAGGCCAGGTACAAAGCAGAAAGTGCATAGAAG...GTCCTTACCCACCGACATCACAGCCCCTATGAAGAAAGTAGCCACAATCTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp AGATTCAGCTCGCCACCATTCAAGAAAGGACAGGGCCTTGGCTGCTCGGCAGGTTGGTTGCATATAGAATaGTTGTTTGCTCAAAAGAGA +
Preference number: 4 (lower is better)
Translates to: RFSSPPFKKGQGLGCSAGWLHIE*LFAQKR
Trigger: TCTCTTTTGAGCAAACAAGCATTCTATATGCAACCA...ACCTGCCGAGCAGCCAAGGCCCTGTCCTTTCTTGAATGGTGGCGAGCTGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp GATTTCCAGCCCTCACCACGGTTAAGTCACACATTTCCCGACACCTGCTCATTTATTCAATTCAACAAGTaGACCGTATTGCAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: DFQPSPRLSHTFPDTCSFIQFNK*TVLQGL
Trigger: GAGGCCTTGCAATACGGTTCACTTGTTGAATTGAAT...AAATGAGCAGGTGTCGGGAAATGTGTGACTTAACCGTGGTGAGGGCTGGAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS-3UTR CCA 90 bp TTTGAGATTGTGGCTACTTTCTTCATAGGGGCTGTGATGTCGGTGGGTAAGGACTCCAGGAAGTTGATGTaGAAGTCTTTCACCTTCTGC +
Preference number: 4 (lower is better)
Translates to: FEIVATFFIGAVMSVGKDSRKLM*KSFTFC
Trigger: GCAGAAGGTGAAAGACTTCCACATCAACTTCCTGGA...GTCCTTACCCACCGACATCACAGCCCCTATGAAGAAAGTAGCCACAATCTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
3UTR CAA 72 bp AGCAGGTCCCCTCTACTCTGGTTGCATATAGAATGCTaGTTTGCTCAAAAGAGAGGCGCTCTCAACATCAAG +
Preference number: 4 (lower is better)
Translates to: SRSPLLWLHIEC*FAQKRGALNIK
Trigger: CTTGATGTTGAGAGCGCCTCTCTTTTGAGCAAACAAGCATTCTATATGCAACCAGAGTAGAGGGGACCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp TCTACTCTGGTTGCATATAGAATGCTTGTTTGCTCAAAAGAGAGGCGCTCTCAAGTCAGGAGATACCTGTaGGAACCTAGACGGGAAAAC +
Preference number: 4 (lower is better)
Translates to: STLVAYRMLVCSKERRSQVRRYL*EPRREN
Trigger: GTTTTCCCGTCTAGGTTCTCACAGGTATCTCCTGAC...TTGAGAGCGCCTCTCTTTTGAGCAAACAAGCATTCTATATGCAACCAGAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR GCA 90 bp TCTACTCTGGTTGCATATAGAATGCTTGTTTGCTCAAAAGAGAGGCGCTCTCAAAGTTTCTGTTTCCTCTaGACGGACCCGGTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: STLVAYRMLVCSKERRSQSFCFL*TDPVWK
Trigger: TTTCCACACCGGGTCCGTGCAGAGGAAACAGAAACT...TTGAGAGCGCCTCTCTTTTGAGCAAACAAGCATTCTATATGCAACCAGAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR TCA 90 bp TCTACTCTGGTTGCATATAGAATGCTTGTTTGCTCAAAAGAGAGGCGCTCTCAACTCAGAGATGACAGCTaGATAGAGGGGATATTGTGG +
Preference number: 4 (lower is better)
Translates to: STLVAYRMLVCSKERRSQLRDDS*IEGILW
Trigger: CCACAATATCCCCTCTATTCAGCTGTCATCTCTGAG...TTGAGAGCGCCTCTCTTTTGAGCAAACAAGCATTCTATATGCAACCAGAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp TCTACTCTGGTTGCATATAGAATGCTTGTTTGCTCAAAAGAGAGGCGCTCTCAAGATGACCTCTGTGAATaGCTTTTTGATACCCCGCTG +
Preference number: 4 (lower is better)
Translates to: STLVAYRMLVCSKERRSQDDLCE*LFDTPL
Trigger: CAGCGGGGTATCAAAAAGCCATTCACAGAGGTCATC...TTGAGAGCGCCTCTCTTTTGAGCAAACAAGCATTCTATATGCAACCAGAGTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340124.9
CDS-3UTR GCA 90 bp GATTTCCAGCCCTCACCACGGTTAAGTCACACATTTCCCGACACCTGCTCATTTTGGTTGCATATAGAATaGTTGTTTGCTCAAAAGAGA +
Preference number: 4 (lower is better)
Translates to: DFQPSPRLSHTFPDTCSFWLHIE*LFAQKR
Trigger: TCTCTTTTGAGCAAACAAGCATTCTATATGCAACCA...AAATGAGCAGGTGTCGGGAAATGTGTGACTTAACCGTGGTGAGGGCTGGAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CCA 90 bp TCTACTCTGGTTGCATATAGAATGCTTGTTTGCTCAAAAGAGAGGCGCTCTCAATCCAGGAAGTTGATGTaGAAGTCTTTCACCTTCTGC +
Preference number: 4 (lower is better)
Translates to: STLVAYRMLVCSKERRSQSRKLM*KSFTFC
Trigger: GCAGAAGGTGAAAGACTTCCACATCAACTTCCTGGA...TTGAGAGCGCCTCTCTTTTGAGCAAACAAGCATTCTATATGCAACCAGAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp CCAGGCCACCGGGCGGACCCTTTCTCAGCCCCAGGGGCCTTCCAGGCCCTTCTGTCGATCTCGCCGGCCTaGAGCACGATGGGTCCCCGC +
Preference number: 5 (lower is better)
Translates to: PGHRADPFSAPGAFQALLSISPA*STMGPR
Trigger: GCGGGGACCCATCGTGCTCAAGGCCGGCGAGATCGA...CAGAAGGGCCTGGAAGGCCCCTGGGGCTGAGAAAGGGTCCGCCCGGTGGCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp GCCTCCAGGCCACCGGGCGGACCCTTTCTCAGCCCCAGGGGCCTTCCAGGCCCTAGAAAGGACAGGGCCTaGGCTGCTCGGCAGGTCCCG +
Preference number: 5 (lower is better)
Translates to: ASRPPGGPFLSPRGLPGPRKDRA*AARQVP
Trigger: CGGGACCTGCCGAGCAGCCAAGGCCCTGTCCTTTCT...AGGGCCTGGAAGGCCCCTGGGGCTGAGAAAGGGTCCGCCCGGTGGCCTGGAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp CAACATCCTGCCCAGTCCACGTGCTACTGCGCTCCCGGCGCCTGCCTCCAGGCCACACCTGTCCGTGACTaGCCGCCCCCGGAGACGAGG +
Preference number: 5 (lower is better)
Translates to: QHPAQSTCYCAPGACLQATPVRD*PPPETR
Trigger: CCTCGTCTCCGGGGGCGGCAAGTCACGGACAGGTGT...GGCCTGGAGGCAGGCGCCGGGAGCGCAGTAGCACGTGGACTGGGCAGGATGTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp CAACATCCTGCCCAGTCCACGTGCTACTGCGCTCCCGGCGCCTGCCTCCAGGCCGAGGCGAGCTCCACGTaGCTGGAGTACTCGGGCCCC +
Preference number: 5 (lower is better)
Translates to: QHPAQSTCYCAPGACLQAEASST*LEYSGP
Trigger: GGGGCCCGAGTACTCCAGCAACGTGGAGCTCGCCTC...GGCCTGGAGGCAGGCGCCGGGAGCGCAGTAGCACGTGGACTGGGCAGGATGTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp AGGATGGGGAAGCTCCCAGTGAGGGAGGCGAGGGCTAAGCCCGTAGCACCGCAGTCGATCTCGCCGGCCTaGAGCACGATGGGTCCCCGC +
Preference number: 5 (lower is better)
Translates to: RMGKLPVREARAKPVAPQSISPA*STMGPR
Trigger: GCGGGGACCCATCGTGCTCAAGGCCGGCGAGATCGA...CTGCGGTGCTACGGGCTTAGCCCTCGCCTCCCTCACTGGGAGCTTCCCCATCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp ACCGGTCACCCGCGGGATGGGTCCACACCATTCCAGCGGCTCTCTCCACGGAAGGGATCACAGTGGTCTTaGGCCTCCTGCACCGCCCGC +
Preference number: 5 (lower is better)
Translates to: TGHPRDGSTPFQRLSPRKGSQWS*ASCTAR
Trigger: GCGGGCGGTGCAGGAGGCCAAAGACCACTGTGATCC...CTTCCGTGGAGAGAGCCGCTGGAATGGTGTGGACCCATCCCGCGGGTGACCGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp GGGATGGGTCCACACCATTCCAGCGGCTCTCTCCACGGAAGTGGGACACTGCCGAGAAAGGACAGGGCCTaGGCTGCTCGGCAGGTCCCG +
Preference number: 5 (lower is better)
Translates to: GMGPHHSSGSLHGSGTLPRKDRA*AARQVP
Trigger: CGGGACCTGCCGAGCAGCCAAGGCCCTGTCCTTTCT...CGGCAGTGTCCCACTTCCGTGGAGAGAGCCGCTGGAATGGTGTGGACCCATCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp CCAGGCCACCGGGCGGACCCTTTCTCAGCCCCAGGGGCCTTCCAGGCCCTTCTGTTCTCCAATCCCATTTaGGGACATGCGGGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: PGHRADPFSAPGAFQALLFSNPI*GHAGSQ
Trigger: CTGGGACCCCGCATGTCCCAAAATGGGATTGGAGAA...CAGAAGGGCCTGGAAGGCCCCTGGGGCTGAGAAAGGGTCCGCCCGGTGGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp CTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACTGAAATTCAGCGCTCGGGCCGCACCTaGAGCACCGCCGAGGCCTCG +
Preference number: 5 (lower is better)
Translates to: LSTEVGHCRAALCVTEIQRSGRT*STAEAS
Trigger: CGAGGCCTCGGCGGTGCTCAAGGTGCGGCCCGAGCG...CTGAATTTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340124.9
CDS-3UTR CAA 90 bp CCAGGCCACCGGGCGGACCCTTTCTCAGCCCCAGGGGCCTTCCAGGCCCTTCTGGTGGGGTTCCCAGGGTaGATTATGCAGAGCACCTTA +
Preference number: 5 (lower is better)
Translates to: PGHRADPFSAPGAFQALLVGFPG*IMQSTL
Trigger: TAAGGTGCTCTGCATAATCAACCCTGGGAACCCCAC...CAGAAGGGCCTGGAAGGCCCCTGGGGCTGAGAAAGGGTCCGCCCGGTGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp GCCTCCAGGCCACCGGGCGGACCCTTTCTCAGCCCCAGGGGCCTTCCAGGCCCTTATGCACTTTCTGCTTaGTACCTGGCCTGTGGGGTT +
Preference number: 5 (lower is better)
Translates to: ASRPPGGPFLSPRGLPGPYALSA*YLACGV
Trigger: AACCCCACAGGCCAGGTACAAAGCAGAAAGTGCATA...AGGGCCTGGAAGGCCCCTGGGGCTGAGAAAGGGTCCGCCCGGTGGCCTGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp CAACATCCTGCCCAGTCCACGTGCTACTGCGCTCCCGGCGCCTGCCTCCAGGCCGCAGCCTCCACAGCTTaGGCAGGAATGAAGATCCGA +
Preference number: 5 (lower is better)
Translates to: QHPAQSTCYCAPGACLQAAASTA*AGMKIR
Trigger: TCGGATCTTCATTCCTGCCAAAGCTGTGGAGGCTGC...GGCCTGGAGGCAGGCGCCGGGAGCGCAGTAGCACGTGGACTGGGCAGGATGTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp CAACATCCTGCCCAGTCCACGTGCTACTGCGCTCCCGGCGCCTGCCTCCAGGCCTCTGTGAATGGCTTTTaGATACCCCGCTGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: QHPAQSTCYCAPGACLQASVNGF*IPRCSS
Trigger: CGAGCTGCAGCGGGGTATCAAAAAGCCATTCACAGA...GGCCTGGAGGCAGGCGCCGGGAGCGCAGTAGCACGTGGACTGGGCAGGATGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340124.9
CDS-3UTR CAA 90 bp GCTAATGGCAGAGAAGCCGCATGCTGGGGGATGGCACCCTCCTGTACTGGGAGAGGATCACAGTGGTCTTaGGCCTCCTGCACCGCCCGC +
Preference number: 5 (lower is better)
Translates to: ANGREAACWGMAPSCTGRGSQWS*ASCTAR
Trigger: GCGGGCGGTGCAGGAGGCCAAAGACCACTGTGATCC...TCTCCCAGTACAGGAGGGTGCCATCCCCCAGCATGCGGCTTCTCTGCCATTAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp AGGATGGGGAAGCTCCCAGTGAGGGAGGCGAGGGCTAAGCCCGTAGCACCGCAGTCTTCACGGATGCAGTaGACACCCTGGCTAGCACTG +
Preference number: 5 (lower is better)
Translates to: RMGKLPVREARAKPVAPQSSRMQ*TPWLAL
Trigger: CAGTGCTAGCCAGGGTGTCAACTGCATCCGTGAAGA...CTGCGGTGCTACGGGCTTAGCCCTCGCCTCCCTCACTGGGAGCTTCCCCATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp CCAGGCCACCGGGCGGACCCTTTCTCAGCCCCAGGGGCCTTCCAGGCCCTTCTGGTGAATTCCTGGGACTaGGTTAAACAGGTCTTCCGT +
Preference number: 5 (lower is better)
Translates to: PGHRADPFSAPGAFQALLVNSWD*VKQVFR
Trigger: ACGGAAGACCTGTTTAACCAAGTCCCAGGAATTCAC...CAGAAGGGCCTGGAAGGCCCCTGGGGCTGAGAAAGGGTCCGCCCGGTGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp AGGCAGAGTCACGGGGGAGGCGAGTTCAGCCTGACGGGCATTGGGAGGAAGAGCCATGTCTGGAGCCATTaGATGGGCCTGAGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: RQSHGGGEFSLTGIGRKSHVWSH*MGLSSL
Trigger: GAGGCTGCTCAGGCCCATCAAATGGCTCCAGACATG...GCTCTTCCTCCCAATGCCCGTCAGGCTGAACTCGCCTCCCCCGTGACTCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp CCAGGCCACCGGGCGGACCCTTTCTCAGCCCCAGGGGCCTTCCAGGCCCTTCTGTTTCCAGCAGAGCCATaGTTAAGTACCTCTGTCAGG +
Preference number: 5 (lower is better)
Translates to: PGHRADPFSAPGAFQALLFPAEP*LSTSVR
Trigger: CCTGACAGAGGTACTTAACAATGGCTCTGCTGGAAA...CAGAAGGGCCTGGAAGGCCCCTGGGGCTGAGAAAGGGTCCGCCCGGTGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS TCA 90 bp GTATTGCAAGGCCTCACTGAGTGCCCGGTGCTGGGCACCAGTAAGTaGACGGGCGGGAGGGGGCATTCTCTCGTTTTAGCCAGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: VLQGLTECPVLGTSK*TGGRGHSLVLARLG
Trigger: GCCAAGCCTGGCTAAAACGAGAGAATGCCCCCTCCCGCCCGTTCACTTACTGGTGCCCAGCACCGGGCACTCAGTGAGGCCTTGCAATAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS-3UTR CAA 90 bp AGATTCAGCTCGCCACCATTCAAGAAAGGACAGGGCCTTGGCTGCTCGGCAGGTCGCTGCATCGCGCGCTaGCGGAGAGAAACCCTGTCG +
Preference number: 5 (lower is better)
Translates to: RFSSPPFKKGQGLGCSAGRCIAR*RRETLS
Trigger: CGACAGGGTTTCTCTCCGCAAGCGCGCGATGCAGCG...ACCTGCCGAGCAGCCAAGGCCCTGTCCTTTCTTGAATGGTGGCGAGCTGAATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340124.9
CDS-3UTR CAA 90 bp GACACTGCCGGGCTGCACTATGTGTCACTGAAATTCAGGGAGACCTCTCAGACGACACCTGTCCGTGACTaGCCGCCCCCGGAGACGAGG +
Preference number: 5 (lower is better)
Translates to: DTAGLHYVSLKFRETSQTTPVRD*PPPETR
Trigger: CCTCGTCTCCGGGGGCGGCAAGTCACGGACAGGTGT...CGTCTGAGAGGTCTCCCTGAATTTCAGTGACACATAGTGCAGCCCGGCAGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp CCTTCCAGGCCCTTCTGTTCAAAGGACCGGATGCTTCACACCGCTAAGGGCTTTGAGGCGAGCTCCACGTaGCTGGAGTACTCGGGCCCC +
Preference number: 5 (lower is better)
Translates to: PSRPFCSKDRMLHTAKGFEASST*LEYSGP
Trigger: GGGGCCCGAGTACTCCAGCAACGTGGAGCTCGCCTC...AAAGCCCTTAGCGGTGTGAAGCATCCGGTCCTTTGAACAGAAGGGCCTGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp CAACATCCTGCCCAGTCCACGTGCTACTGCGCTCCCGGCGCCTGCCTCCAGGCCGTGAATTCCTGGGACTaGGTTAAACAGGTCTTCCGT +
Preference number: 5 (lower is better)
Translates to: QHPAQSTCYCAPGACLQAVNSWD*VKQVFR
Trigger: ACGGAAGACCTGTTTAACCAAGTCCCAGGAATTCAC...GGCCTGGAGGCAGGCGCCGGGAGCGCAGTAGCACGTGGACTGGGCAGGATGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS TCA 90 bp GAGCCATTTGATGGGCCTGAGCAGCCTCCACAGCTTTGGCAGGAATaGAGATCCGAGGGAAGGCGTACATGGCCCCCTGCAAGGGGTTGC +
Preference number: 5 (lower is better)
Translates to: EPFDGPEQPPQLWQE*RSEGRRTWPPARGC
Trigger: GCAACCCCTTGCAGGGGGCCATGTACGCCTTCCCTCGGATCTTCATTCCTGCCAAAGCTGTGGAGGCTGCTCAGGCCCATCAAATGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340124.9
ENST00000440783.2
ENST00000562801.5
ENST00000569193.1
CDS-3UTR CAA 90 bp AGGAATAGCCAGGCAAGCCTCTGGGTGCCCGGTGATGCACTGTCTGAGGCACAGGGCTGTCCAGCAGGTTaGGGTAGGTGCATAGTGCCA +
Preference number: 5 (lower is better)
Translates to: RNSQASLWVPGDALSEAQGCPAG*GRCIVP
Trigger: TGGCACTATGCACCTACCCAAACCTGCTGGACAGCC...CTGTGCCTCAGACAGTGCATCACCGGGCACCCAGAGGCTTGCCTGGCTATTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp ACCGGTCACCCGCGGGATGGGTCCACACCATTCCAGCGGCTCTCTCCACGGAAGATCATGGTGGTGAGTTaGGATTTCCAGCCCTCACCA +
Preference number: 5 (lower is better)
Translates to: TGHPRDGSTPFQRLSPRKIMVVS*DFQPSP
Trigger: TGGTGAGGGCTGGAAATCCAAACTCACCACCATGAT...CTTCCGTGGAGAGAGCCGCTGGAATGGTGTGGACCCATCCCGCGGGTGACCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp GACACTGCCGGGCTGCACTATGTGTCACTGAAATTCAGGGAGACCTCTCAGACGGCTGCGGTTTTTCCCTaGCTCAGCGGCCCCAGCCTC +
Preference number: 5 (lower is better)
Translates to: DTAGLHYVSLKFRETSQTAAVFP*LSGPSL
Trigger: GAGGCTGGGGCCGCTGAGCAAGGGAAAAACCGCAGC...CGTCTGAGAGGTCTCCCTGAATTTCAGTGACACATAGTGCAGCCCGGCAGTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS-3UTR CAA 90 bp GGAGAACAGGCACCGGTCACCCGCGGGATGGGTCCACACCATTCCAGCGGCTCTTCTGTGAATGGCTTTTaGATACCCTCGGTGACTGTC +
Preference number: 5 (lower is better)
Translates to: GEQAPVTRGMGPHHSSGSSVNGF*IPSVTV
Trigger: GACAGTCACCGAGGGTATCAAAAAGCCATTCACAGA...AGAGCCGCTGGAATGGTGTGGACCCATCCCGCGGGTGACCGGTGCCTGTTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS GCA 90 bp AATTCAACAAGTGAACCGTATTGCAAGGCCTCACTGAGTGCCCGGTaGTGGGCACCAGTAAGTGAACGGGCGGGAGGGGGCATTCTCTCG +
Preference number: 5 (lower is better)
Translates to: NSTSEPYCKASLSAR*WAPVSERAGGGILS
Trigger: CGAGAGAATGCCCCCTCCCGCCCGTTCACTTACTGGTGCCCAGCACCGGGCACTCAGTGAGGCCTTGCAATACGGTTCACTTGTTGAATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS CCA 90 bp GTGGGGTTCCCAGGGTTGATTATGCAGAGCACCTTAGGATCACAGTaGTCTTTGGCCTCCTGCACCGCCCGCCGGAGCTCATTCACATTC +
Preference number: 5 (lower is better)
Translates to: VGFPGLIMQSTLGSQ*SLASCTARRSSFTF
Trigger: GAATGTGAATGAGCTCCGGCGGGCGGTGCAGGAGGCCAAAGACCACTGTGATCCTAAGGTGCTCTGCATAATCAACCCTGGGAACCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS CCA 90 bp TCAACAAGTGAACCGTATTGCAAGGCCTCACTGAGTGCCCGGTGCTaGGCACCAGTAAGTGAACGGGCGGGAGGGGGCATTCTCTCGTTT +
Preference number: 5 (lower is better)
Translates to: STSEPYCKASLSARC*APVSERAGGGILSF
Trigger: AAACGAGAGAATGCCCCCTCCCGCCCGTTCACTTACTGGTGCCCAGCACCGGGCACTCAGTGAGGCCTTGCAATACGGTTCACTTGTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS GCA 90 bp TTGATTATGCAGAGCACCTTAGGATCACAGTGGTCTTTGGCCTCCTaGACCGCCCGCCGGAGCTCATTCACATTCAGCGCCCAGCAGTTC +
Preference number: 5 (lower is better)
Translates to: LIMQSTLGSQWSLAS*TARRSSFTFSAQQF
Trigger: GAACTGCTGGGCGCTGAATGTGAATGAGCTCCGGCGGGCGGTGCAGGAGGCCAAAGACCACTGTGATCCTAAGGTGCTCTGCATAATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp CTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACTGAAATTCAGGGCTGTCCAGCAGGTTaGGGTAGGTGCATAGTGCCA +
Preference number: 5 (lower is better)
Translates to: LSTEVGHCRAALCVTEIQGCPAG*GRCIVP
Trigger: TGGCACTATGCACCTACCCAAACCTGCTGGACAGCC...CTGAATTTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp GCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACTGAATATGCACTTTCTGCTTaGTACCTGGCCTGTGGGGTT +
Preference number: 5 (lower is better)
Translates to: AALSTEVGHCRAALCVTEYALSA*YLACGV
Trigger: AACCCCACAGGCCAGGTACAAAGCAGAAAGTGCATA...TTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp TCTCAGACGGGGTTCCAGCCTACGCATGTTCAAGGGAACCCCTCATTCCCAAAGTTCACCAGCTGGCCCTaGATCTCAGGGTGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: SQTGFQPTHVQGNPSFPKFTSWP*ISGCRL
Trigger: CAACCTGCACCCTGAGATCAAGGGCCAGCTGGTGAA...CTTTGGGAATGAGGGGTTCCCTTGAACATGCGTAGGCTGGAACCCCGTCTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp CCTTCCAGGCCCTTCTGTTCAAAGGACCGGATGCTTCACACCGCTAAGGGCTTTCATGTCTGGAGCCATTaGATGGGCCTGAGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: PSRPFCSKDRMLHTAKGFHVWSH*MGLSSL
Trigger: GAGGCTGCTCAGGCCCATCAAATGGCTCCAGACATG...AAAGCCCTTAGCGGTGTGAAGCATCCGGTCCTTTGAACAGAAGGGCCTGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp GGAGAACAGGCACCGGTCACCCGCGGGATGGGTCCACACCATTCCAGCGGCTCTTCCCCTCTACTCTGGTaGCATATAGAATGCTTGTTT +
Preference number: 5 (lower is better)
Translates to: GEQAPVTRGMGPHHSSGSSPLLW*HIECLF
Trigger: AAACAAGCATTCTATATGCAACCAGAGTAGAGGGGA...AGAGCCGCTGGAATGGTGTGGACCCATCCCGCGGGTGACCGGTGCCTGTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp ATTCCAGCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCATCATGGTGGTGAGTTaGGATTTCCAGCCCTCACCA +
Preference number: 5 (lower is better)
Translates to: IPAALSTEVGHCRAALCVIMVVS*DFQPSP
Trigger: TGGTGAGGGCTGGAAATCCAAACTCACCACCATGAT...GACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGCTGGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS TCA 90 bp TCCCGCTGGGGCTCAGGCGTCCTCACGCGTACTTCTCCAGGAAGTTaGTGTGGAAGTCTTTCACCTTCTGCAGCACCGTTTTCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: SRWGSGVLTRTSPGS*CGSLSPSAAPFSAS
Trigger: AGAAGCTGAAAACGGTGCTGCAGAAGGTGAAAGACTTCCACATCAACTTCCTGGAGAAGTACGCGTGAGGACGCCTGAGCCCCAGCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340124.9
ENST00000440783.2
ENST00000569193.1
CDS GCA 90 bp CTGGACCTTGGTTCCACGAGAGTAGGGCAGACACACAACGTGCGGTaGCTGGCAGCACGGCCCGCTCAACAATTGACGAATTCAATTCAA +
Preference number: 5 (lower is better)
Translates to: LDLGSTRVGQTHNVR*LAARPAQQLTNSIQ
Trigger: TTGAATTGAATTCGTCAATTGTTGAGCGGGCCGTGCTGCCAGGCACCGCACGTTGTGTGTCTGCCCTACTCTCGTGGAACCAAGGTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS CCA 90 bp ACACCACACAGACGGAGTGGGTGGGGTGGTCTGTTCCTTCGACACTaGGGTATCAGACAGACTGACCAAAGAAGAGCTTGTGTGAGCCTG +
Preference number: 5 (lower is better)
Translates to: TPHRRSGWGGLFLRH*GIRQTDQRRACVSL
Trigger: CAGGCTCACACAAGCTCTTCTTTGGTCAGTCTGTCTGATACCCCAGTGTCGAAGGAACAGACCACCCCACCCACTCCGTCTGTGTGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569193.1
CDS-3UTR CAA 90 bp TCTCAGACGGGGTTCCAGCCTACGCATGTTCAAGGGAACCCCTCATTCCCAAAGTCTTCACGGATGCAGTaGACACCCTGGCTAGCACTG +
Preference number: 5 (lower is better)
Translates to: SQTGFQPTHVQGNPSFPKSSRMQ*TPWLAL
Trigger: CAGTGCTAGCCAGGGTGTCAACTGCATCCGTGAAGA...CTTTGGGAATGAGGGGTTCCCTTGAACATGCGTAGGCTGGAACCCCGTCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp AGATTCAGCTCGCCACCATTCAAGAAAGGACAGGGCCTTGGCTGCTCGGCAGGTGTGGGGTTCCCAGGGTaGATTATGCAGAGCACCTTA +
Preference number: 5 (lower is better)
Translates to: RFSSPPFKKGQGLGCSAGVGFPG*IMQSTL
Trigger: TAAGGTGCTCTGCATAATCAACCCTGGGAACCCCAC...ACCTGCCGAGCAGCCAAGGCCCTGTCCTTTCTTGAATGGTGGCGAGCTGAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp AGGATGGGGAAGCTCCCAGTGAGGGAGGCGAGGGCTAAGCCCGTAGCACCGCAGTTGCATATAGAATGCTaGTTTGCTCAAAAGAGAGGC +
Preference number: 5 (lower is better)
Translates to: RMGKLPVREARAKPVAPQLHIEC*FAQKRG
Trigger: GCCTCTCTTTTGAGCAAACAAGCATTCTATATGCAA...CTGCGGTGCTACGGGCTTAGCCCTCGCCTCCCTCACTGGGAGCTTCCCCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp CCTTCCAGGCCCTTCTGTTCAAAGGACCGGATGCTTCACACCGCTAAGGGCTTTTTCTCCAATCCCATTTaGGGACATGCGGGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: PSRPFCSKDRMLHTAKGFFSNPI*GHAGSQ
Trigger: CTGGGACCCCGCATGTCCCAAAATGGGATTGGAGAA...AAAGCCCTTAGCGGTGTGAAGCATCCGGTCCTTTGAACAGAAGGGCCTGGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS TCA 90 bp AAGATCCGAGGGAAGGCGTACATGGCCCCCTGCAAGGGGTTGCAGTaGATTCCTGGGACTTGGTTAAACAGGTCTTCCGTCAGCTTTGCT +
Preference number: 5 (lower is better)
Translates to: KIRGKAYMAPCKGLQ*IPGTWLNRSSVSFA
Trigger: AGCAAAGCTGACGGAAGACCTGTTTAACCAAGTCCCAGGAATTCACTGCAACCCCTTGCAGGGGGCCATGTACGCCTTCCCTCGGATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340124.9
ENST00000440783.2
ENST00000562801.5
ENST00000569193.1
CDS CCA 90 bp CTGGGGCTCAGGCGTCCTCACGCGTACTTCTCCAGGAAGTTGATGTaGAAGTCTTTCACCTTCTGCAGCACCGTTTTCAGCTTCTCCACT +
Preference number: 5 (lower is better)
Translates to: LGLRRPHAYFSRKLM*KSFTFCSTVFSFST
Trigger: AGTGGAGAAGCTGAAAACGGTGCTGCAGAAGGTGAAAGACTTCCACATCAACTTCCTGGAGAAGTACGCGTGAGGACGCCTGAGCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340124.9
ENST00000440783.2
ENST00000569193.1
CDS CCA 90 bp CCAAAGAAGAGCTTGTGTGAGCCTGAGCACAGCAAAACAGGGAGGTaGGTGGAACACATCTCCCGGCACAAATTCTTCCACAGCGCTCAC +
Preference number: 5 (lower is better)
Translates to: PKKSLCEPEHSKTGR*VEHISRHKFFHSAH
Trigger: GTGAGCGCTGTGGAAGAATTTGTGCCGGGAGATGTGTTCCACCCACCTCCCTGTTTTGCTGTGCTCAGGCTCACACAAGCTCTTCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569193.1
CDS-3UTR CAA 90 bp GCTAGGAAACCGACCAGATTCAGCTCGCCACCATTCAAGAAAGGACAGGGCCTTGCAGCCTCCACAGCTTaGGCAGGAATGAAGATCCGA +
Preference number: 5 (lower is better)
Translates to: ARKPTRFSSPPFKKGQGLAASTA*AGMKIR
Trigger: TCGGATCTTCATTCCTGCCAAAGCTGTGGAGGCTGC...AAGGCCCTGTCCTTTCTTGAATGGTGGCGAGCTGAATCTGGTCGGTTTCCTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp GCGGCTCTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACTGAACGGCCCGCTCAACAATaGACGAATTCAATTCAACAA +
Preference number: 5 (lower is better)
Translates to: AALSTEVGHCRAALCVTERPAQQ*TNSIQQ
Trigger: TTGTTGAATTGAATTCGTCAATTGTTGAGCGGGCCG...TTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAGAGCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS CCA 90 bp TTGCTTCTTTCTTCATTCGCTTATGTTCCTCTCTCCACTGGACCTTaGTTCCACGAGAGTAGGGCAGACACACAACGTGCGGTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: LLLSSFAYVPLSTGP*FHESRADTQRAVPG
Trigger: GCCAGGCACCGCACGTTGTGTGTCTGCCCTACTCTCGTGGAACCAAGGTCCAGTGGAGAGAGGAACATAAGCGAATGAAGAAAGAAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS-3UTR CAA 90 bp GACACTGCCGGGCTGCACTATGTGTCACTGAAATTCAGGGAGACCTCTCAGACGTCTGGAGAGTACACGTaGTCCTGGTACACCTCATCA +
Preference number: 5 (lower is better)
Translates to: DTAGLHYVSLKFRETSQTSGEYT*SWYTSS
Trigger: TGATGAGGTGTACCAGGACAACGTGTACTCTCCAGA...CGTCTGAGAGGTCTCCCTGAATTTCAGTGACACATAGTGCAGCCCGGCAGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp GATTTCCAGCCCTCACCACGGTTAAGTCACACATTTCCCGACACCTGCTCATTTTTCACCAGCTGGCCCTaGATCTCAGGGTGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: DFQPSPRLSHTFPDTCSFFTSWP*ISGCRL
Trigger: CAACCTGCACCCTGAGATCAAGGGCCAGCTGGTGAA...AAATGAGCAGGTGTCGGGAAATGTGTGACTTAACCGTGGTGAGGGCTGGAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp CTCTCCACGGAAGTGGGACACTGCCGGGCTGCACTATGTGTCACTGAAATTCAGGTCAGCTTTGCTTTTTaGGCCAGATTACCCAGGACC +
Preference number: 5 (lower is better)
Translates to: LSTEVGHCRAALCVTEIQVSFAF*ARLPRT
Trigger: GGTCCTGGGTAATCTGGCCAAAAAAGCAAAGCTGAC...CTGAATTTCAGTGACACATAGTGCAGCCCGGCAGTGTCCCACTTCCGTGGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp GACACTGCCGGGCTGCACTATGTGTCACTGAAATTCAGGGAGACCTCTCAGACGGAAAACAGCCACAGGTaGATCTGCATCTGTTCCTCC +
Preference number: 5 (lower is better)
Translates to: DTAGLHYVSLKFRETSQTENSHR*ICICSS
Trigger: GGAGGAACAGATGCAGATCAACCTGTGGCTGTTTTC...CGTCTGAGAGGTCTCCCTGAATTTCAGTGACACATAGTGCAGCCCGGCAGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp CCTTCCAGGCCCTTCTGTTCAAAGGACCGGATGCTTCACACCGCTAAGGGCTTTTTTCCAGCAGAGCCATaGTTAAGTACCTCTGTCAGG +
Preference number: 5 (lower is better)
Translates to: PSRPFCSKDRMLHTAKGFFPAEP*LSTSVR
Trigger: CCTGACAGAGGTACTTAACAATGGCTCTGCTGGAAA...AAAGCCCTTAGCGGTGTGAAGCATCCGGTCCTTTGAACAGAAGGGCCTGGAAGG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS TCA 90 bp CTGCAGCACTTGCGGAAATCCCAGATGATGACTTTGCTCCAGCTTTaGACACATGTCCCCTCTGACCCATGCGTTGACTCAGATTTGCTC +
Preference number: 5 (lower is better)
Translates to: LQHLRKSQMMTLLQL*THVPSDPCVDSDLL
Trigger: GAGCAAATCTGAGTCAACGCATGGGTCAGAGGGGACATGTGTTCAAAGCTGGAGCAAAGTCATCATCTGGGATTTCCGCAAGTGCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569193.1
CDS GCA 90 bp CACGCGTACTTCTCCAGGAAGTTGATGTGGAAGTCTTTCACCTTCTaGAGCACCGTTTTCAGCTTCTCCACTGGAGGGAGGATAGTCATC +
Preference number: 5 (lower is better)
Translates to: HAYFSRKLMWKSFTF*STVFSFSTGGRIVI
Trigger: GATGACTATCCTCCCTCCAGTGGAGAAGCTGAAAACGGTGCTGCAGAAGGTGAAAGACTTCCACATCAACTTCCTGGAGAAGTACGCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340124.9
ENST00000440783.2
ENST00000562801.5
ENST00000569193.1
CDS GCA 90 bp GCCCGCTCAACAATTGACGAATTCAATTCAACAAGTGAACCGTATTaGAAGGCCTCACTGAGTGCCCGGTGCTGGGCACCAGTAAGTGAA +
Preference number: 5 (lower is better)
Translates to: ARSTIDEFNSTSEPY*KASLSARCWAPVSE
Trigger: TTCACTTACTGGTGCCCAGCACCGGGCACTCAGTGAGGCCTTGCAATACGGTTCACTTGTTGAATTGAATTCGTCAATTGTTGAGCGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS-3UTR CAA 90 bp GCTCAAAAGAGAGGCGCTCTCAACATCAAGGCACAAAGAAAGACGTCTCCAGGGTCTGGAGAGTACACGTaGTCCTGGTACACCTCATCA +
Preference number: 5 (lower is better)
Translates to: AQKRGALNIKAQRKTSPGSGEYT*SWYTSS
Trigger: TGATGAGGTGTACCAGGACAACGTGTACTCTCCAGA...CCCTGGAGACGTCTTTCTTTGTGCCTTGATGTTGAGAGCGCCTCTCTTTTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp GCTCAAAAGAGAGGCGCTCTCAACATCAAGGCACAAAGAAAGACGTCTCCAGGGGTCAGCTTTGCTTTTTaGGCCAGATTACCCAGGACC +
Preference number: 5 (lower is better)
Translates to: AQKRGALNIKAQRKTSPGVSFAF*ARLPRT
Trigger: GGTCCTGGGTAATCTGGCCAAAAAAGCAAAGCTGAC...CCCTGGAGACGTCTTTCTTTGTGCCTTGATGTTGAGAGCGCCTCTCTTTTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS CCA 90 bp CCAGGGAGTTCTAGGCCAAAGGGTAGAGCCCAGCAGCCTGTGTCATaGGTTCTATTCTCGTACCAGGATGTCTTTCCAGAAAATGAGAAA +
Preference number: 5 (lower is better)
Translates to: PGSSRPKGRAQQPVS*VLFSYQDVFPENEK
Trigger: TTTCTCATTTTCTGGAAAGACATCCTGGTACGAGAATAGAACCCATGACACAGGCTGCTGGGCTCTACCCTTTGGCCTAGAACTCCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569193.1
CDS-3UTR CAA 90 bp CCTTCCAGGCCCTTCTGTTCAAAGGACCGGATGCTTCACACCGCTAAGGGCTTTTCCCCTCTACTCTGGTaGCATATAGAATGCTTGTTT +
Preference number: 5 (lower is better)
Translates to: PSRPFCSKDRMLHTAKGFSPLLW*HIECLF
Trigger: AAACAAGCATTCTATATGCAACCAGAGTAGAGGGGA...AAAGCCCTTAGCGGTGTGAAGCATCCGGTCCTTTGAACAGAAGGGCCTGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS-3UTR CAA 90 bp AGATTCAGCTCGCCACCATTCAAGAAAGGACAGGGCCTTGGCTGCTCGGCAGGTATCACTGAGACTCTATaGCTTCTTTCTTCATTCGCT +
Preference number: 5 (lower is better)
Translates to: RFSSPPFKKGQGLGCSAGITETL*LLSSFA
Trigger: AGCGAATGAAGAAAGAAGCAATAGAGTCTCAGTGAT...ACCTGCCGAGCAGCCAAGGCCCTGTCCTTTCTTGAATGGTGGCGAGCTGAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS-3UTR CAA 90 bp CCTTCCAGGCCCTTCTGTTCAAAGGACCGGATGCTTCACACCGCTAAGGGCTTTTTGCATATAGAATGCTaGTTTGCTCAAAAGAGAGGC +
Preference number: 5 (lower is better)
Translates to: PSRPFCSKDRMLHTAKGFLHIEC*FAQKRG
Trigger: GCCTCTCTTTTGAGCAAACAAGCATTCTATATGCAA...AAAGCCCTTAGCGGTGTGAAGCATCCGGTCCTTTGAACAGAAGGGCCTGGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS TCA 90 bp CAGCACAGCAGTCAGTATCTCTGGATAAAGATTCACTCCAGCCACTaGTCTTTCCTGCAGCACTTGCGGAAATCCCAGATGATGACTTTG +
Preference number: 5 (lower is better)
Translates to: QHSSQYLWIKIHSSH*SFLQHLRKSQMMTL
Trigger: CAAAGTCATCATCTGGGATTTCCGCAAGTGCTGCAGGAAAGATCAGTGGCTGGAGTGAATCTTTATCCAGAGATACTGACTGCTGTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569193.1
CDS CCA 90 bp TTTTGGCCAGATTACCCAGGACCGACTCCTTCTCCTGATGAGAGATaGAAACAGCACAGCAGTCAGTATCTCTGGATAAAGATTCACTCC +
Preference number: 5 (lower is better)
Translates to: FWPDYPGPTPSPDER*KQHSSQYLWIKIHS
Trigger: GGAGTGAATCTTTATCCAGAGATACTGACTGCTGTGCTGTTTCCATCTCTCATCAGGAGAAGGAGTCGGTCCTGGGTAATCTGGCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569193.1
CDS-3UTR CAA 90 bp TCTACTCTGGTTGCATATAGAATGCTTGTTTGCTCAAAAGAGAGGCGCTCTCAAGAAAACAGCCACAGGTaGATCTGCATCTGTTCCTCC +
Preference number: 5 (lower is better)
Translates to: STLVAYRMLVCSKERRSQENSHR*ICICSS
Trigger: GGAGGAACAGATGCAGATCAACCTGTGGCTGTTTTC...TTGAGAGCGCCTCTCTTTTGAGCAAACAAGCATTCTATATGCAACCAGAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS CCA 72 bp GGTAGGCCCTCGCCGCACTCGGTTAGCTCGCGCGCCTaGAGCAGCTACCCGGCCCCGGCGCCCACAGCCGCA +
Preference number: 6 (lower is better)
Translates to: GRPSPHSVSSRA*SSYPAPAPTAA
Trigger: TGCGGCTGTGGGCGCCGGGGCCGGGTAGCTGCTCCAGGCGCGCGAGCTAACCGAGTGCGGCGAGGGCCTACC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340124.9
CDS TCA 72 bp CCACCGCCTTCACCTGCGGGTTCATGGACTCCAGCGTaGGGATGCGCTCGCGCCGGCTGCGCTCGGGCCGCA +
Preference number: 6 (lower is better)
Translates to: PPPSPAGSWTPA*GCARAGCARAA
Trigger: TGCGGCCCGAGCGCAGCCGGCGCGAGCGCATCCTCACGCTGGAGTCCATGAACCCGCAGGTGAAGGCGGTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340124.9
CDS CCA 72 bp GTTCACGACAATGTCCATGGCGGCCTGCCCAGACACTaGGGGGCACAGGCGCACCGACAGCAGCTTCACCAG +
Preference number: 6 (lower is better)
Translates to: VHDNVHGGLPRH*GAQAHRQQLHQ
Trigger: CTGGTGAAGCTGCTGTCGGTGCGCCTGTGCCCCCCAGTGTCTGGGCAGGCCGCCATGGACATTGTCGTGAAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340124.9
ENST00000440783.2
ENST00000562801.5
CDS CCA 72 bp CATCTCCCGGCACAAATTCTTCCACAGCGCTCACCCTaGGAGGCTGCCACGTGCCCTGGGGTGTGGGGCACA +
Preference number: 6 (lower is better)
Translates to: HLPAQILPQRSP*EAATCPGVWGT
Trigger: TGTGCCCCACACCCCAGGGCACGTGGCAGCCTCCCAGGGTGAGCGCTGTGGAAGAATTTGTGCCGGGAGATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569193.1
CDS TCA 72 bp GGCCTCACTGAGTGCCCGGTGCTGGGCACCAGTAAGTaGACGGGCGGGAGGGGGCATTCTCTCGTTTTAGCC +
Preference number: 6 (lower is better)
Translates to: GLTECPVLGTSK*TGGRGHSLVLA
Trigger: GGCTAAAACGAGAGAATGCCCCCTCCCGCCCGTTCACTTACTGGTGCCCAGCACCGGGCACTCAGTGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS TCA 72 bp GCCTCCAGGGACGCCCAGAAGAGCAGCCTGTGTGTCTaGCTCTCCTCAGCCAGTTATGCGAGGGAGAAGGGG +
Preference number: 6 (lower is better)
Translates to: ASRDAQKSSLCV*LSSASYAREKG
Trigger: CCCCTTCTCCCTCGCATAACTGGCTGAGGAGAGTCAGACACACAGGCTGCTCTTCTGGGCGTCCCTGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562801.5
CDS TCA 72 bp GATGGGCCTGAGCAGCCTCCACAGCTTTGGCAGGAATaGAGATCCGAGGGAAGGCGTACATGGCCCCCTGCA +
Preference number: 6 (lower is better)
Translates to: DGPEQPPQLWQE*RSEGRRTWPPA
Trigger: TGCAGGGGGCCATGTACGCCTTCCCTCGGATCTTCATTCCTGCCAAAGCTGTGGAGGCTGCTCAGGCCCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340124.9
ENST00000440783.2
ENST00000562801.5
ENST00000569193.1
CDS GCA 72 bp CAGAGCACCTTAGGATCACAGTGGTCTTTGGCCTCCTaGACCGCCCGCCGGAGCTCATTCACATTCAGCGCC +
Preference number: 6 (lower is better)
Translates to: QSTLGSQWSLAS*TARRSSFTFSA
Trigger: GGCGCTGAATGTGAATGAGCTCCGGCGGGCGGTGCAGGAGGCCAAAGACCACTGTGATCCTAAGGTGCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS GCA 72 bp GGTTCCACGAGAGTAGGGCAGACACACAACGTGCGGTaGCTGGCAGCACGGCCCGCTCAACAATTGACGAAT +
Preference number: 6 (lower is better)
Translates to: GSTRVGQTHNVR*LAARPAQQLTN
Trigger: ATTCGTCAATTGTTGAGCGGGCCGTGCTGCCAGGCACCGCACGTTGTGTGTCTGCCCTACTCTCGTGGAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS CAA 72 bp AAGCCCATCCAGAATCACTCAGTGCCCTGTGTTCCCTaGAGACCCATAGAACACCCTCCCCGCAGAGGCCCC +
Preference number: 6 (lower is better)
Translates to: KPIQNHSVPCVP*RPIEHPPRRGP
Trigger: GGGGCCTCTGCGGGGAGGGTGTTCTATGGGTCTCAAGGGAACACAGGGCACTGAGTGATTCTGGATGGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562801.5
CDS CAA 90 bp TTCCCAGGGTTGATTATGCAGAGCACCTTAGGATCACAGTGGTCTTaGGCCTCCTGCACCGCCCGCCGGAGCTCATTCACATTCAGCGCC +
Preference number: 6 (lower is better)
Translates to: FPGLIMQSTLGSQWS*ASCTARRSSFTFSA
Trigger: GGCGCTGAATGTGAATGAGCTCCGGCGGGCGGTGCAGGAGGCCAAAGACCACTGTGATCCTAAGGTGCTCTGCATAATCAACCCTGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS CAA 90 bp CTCCCGCTGGGGCTCAGGCGTCCTCACGCGTACTTCTCCAGGAAGTaGATGTGGAAGTCTTTCACCTTCTGCAGCACCGTTTTCAGCTTC +
Preference number: 6 (lower is better)
Translates to: LPLGLRRPHAYFSRK*MWKSFTFCSTVFSF
Trigger: GAAGCTGAAAACGGTGCTGCAGAAGGTGAAAGACTTCCACATCAACTTCCTGGAGAAGTACGCGTGAGGACGCCTGAGCCCCAGCGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340124.9
ENST00000440783.2
ENST00000569193.1
CDS TCA 72 bp GGGAAGGCGTACATGGCCCCCTGCAAGGGGTTGCAGTaGATTCCTGGGACTTGGTTAAACAGGTCTTCCGTC +
Preference number: 6 (lower is better)
Translates to: GKAYMAPCKGLQ*IPGTWLNRSSV
Trigger: GACGGAAGACCTGTTTAACCAAGTCCCAGGAATTCACTGCAACCCCTTGCAGGGGGCCATGTACGCCTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340124.9
ENST00000440783.2
ENST00000562801.5
ENST00000569193.1
CDS TCA 72 bp GGCTCAGGCGTCCTCACGCGTACTTCTCCAGGAAGTTaGTGTGGAAGTCTTTCACCTTCTGCAGCACCGTTT +
Preference number: 6 (lower is better)
Translates to: GSGVLTRTSPGS*CGSLSPSAAPF
Trigger: AAACGGTGCTGCAGAAGGTGAAAGACTTCCACATCAACTTCCTGGAGAAGTACGCGTGAGGACGCCTGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340124.9
ENST00000440783.2
ENST00000569193.1
CDS CCA 72 bp GTACATGGCCCCCTGCAAGGGGTTGCAGTGAATTCCTaGGACTTGGTTAAACAGGTCTTCCGTCAGCTTTGC +
Preference number: 6 (lower is better)
Translates to: VHGPLQGVAVNS*DLVKQVFRQLC
Trigger: GCAAAGCTGACGGAAGACCTGTTTAACCAAGTCCCAGGAATTCACTGCAACCCCTTGCAGGGGGCCATGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340124.9
ENST00000440783.2
ENST00000562801.5
ENST00000569193.1
CDS CCA 72 bp AGCTTGTGTGAGCCTGAGCACAGCAAAACAGGGAGGTaGGTGGAACACATCTCCCGGCACAAATTCTTCCAC +
Preference number: 6 (lower is better)
Translates to: SLCEPEHSKTGR*VEHISRHKFFH
Trigger: GTGGAAGAATTTGTGCCGGGAGATGTGTTCCACCCACCTCCCTGTTTTGCTGTGCTCAGGCTCACACAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569193.1
CDS CCA 72 bp AGACGGAGTGGGTGGGGTGGTCTGTTCCTTCGACACTaGGGTATCAGACAGACTGACCAAAGAAGAGCTTGT +
Preference number: 6 (lower is better)
Translates to: RRSGWGGLFLRH*GIRQTDQRRAC
Trigger: ACAAGCTCTTCTTTGGTCAGTCTGTCTGATACCCCAGTGTCGAAGGAACAGACCACCCCACCCACTCCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569193.1
CDS CAA 90 bp CAGACACACAACGTGCGGTGCCTGGCAGCACGGCCCGCTCAACAATaGACGAATTCAATTCAACAAGTGAACCGTATTGCAAGGCCTCAC +
Preference number: 6 (lower is better)
Translates to: QTHNVRCLAARPAQQ*TNSIQQVNRIARPH
Trigger: GTGAGGCCTTGCAATACGGTTCACTTGTTGAATTGAATTCGTCAATTGTTGAGCGGGCCGTGCTGCCAGGCACCGCACGTTGTGTGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS CAA 90 bp TGTGCACGCATACACTCACATGTGCATGTGTCTGTGTGTGGTGTGTaGGCATGGTGGGATGTGTGTGTGTGTAGGTGTGGTGGGTGTGTG +
Preference number: 6 (lower is better)
Translates to: CARIHSHVHVSVCGV*AWWDVCVCRCGGCV
Trigger: CACACACCCACCACACCTACACACACACACATCCCACCATGCCAACACACCACACACAGACACATGCACATGTGAGTGTATGCGTGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562801.5
CDS TCA 72 bp TGGTCTGTTCCTTCGACACTGGGGTATCAGACAGACTaGCCAAAGAAGAGCTTGTGTGAGCCTGAGCACAGC +
Preference number: 6 (lower is better)
Translates to: WSVPSTLGYQTD*PKKSLCEPEHS
Trigger: GCTGTGCTCAGGCTCACACAAGCTCTTCTTTGGTCAGTCTGTCTGATACCCCAGTGTCGAAGGAACAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569193.1
CDS CCA 72 bp AGGCGTCCTCACGCGTACTTCTCCAGGAAGTTGATGTaGAAGTCTTTCACCTTCTGCAGCACCGTTTTCAGC +
Preference number: 6 (lower is better)
Translates to: RRPHAYFSRKLM*KSFTFCSTVFS
Trigger: GCTGAAAACGGTGCTGCAGAAGGTGAAAGACTTCCACATCAACTTCCTGGAGAAGTACGCGTGAGGACGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340124.9
ENST00000440783.2
ENST00000562801.5
ENST00000569193.1
CDS CCA 72 bp TCTTCATTCGCTTATGTTCCTCTCTCCACTGGACCTTaGTTCCACGAGAGTAGGGCAGACACACAACGTGCG +
Preference number: 6 (lower is better)
Translates to: SSFAYVPLSTGP*FHESRADTQRA
Trigger: CGCACGTTGTGTGTCTGCCCTACTCTCGTGGAACCAAGGTCCAGTGGAGAGAGGAACATAAGCGAATGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS TCA 72 bp ATTCACCTGGATGGCGTCGAGCTCAGAGATGACAGCTaGATAGAGGGGATATTGTGGGATGGGGATCATCAC +
Preference number: 6 (lower is better)
Translates to: IHLDGVELRDDS*IEGILWDGDHH
Trigger: GTGATGATCCCCATCCCACAATATCCCCTCTATTCAGCTGTCATCTCTGAGCTCGACGCCATCCAGGTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340124.9
ENST00000440783.2
ENST00000562132.5
CDS TCA 72 bp GGTAGTAATTCACCTGGATGGCGTCGAGCTCAGAGATaGCAGCTGAATAGAGGGGATATTGTGGGATGGGGA +
Preference number: 6 (lower is better)
Translates to: GSNSPGWRRAQR*QLNRGDIVGWG
Trigger: TCCCCATCCCACAATATCCCCTCTATTCAGCTGTCATCTCTGAGCTCGACGCCATCCAGGTGAATTACTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340124.9
ENST00000440783.2
ENST00000562132.5
CDS GCA 72 bp GCTTCTCTTCCCAGGCAAAGTGGATCACATCTTCTATaGACTTTCTGCTTTGTACCTGGCCTGTGGGGTTCC +
Preference number: 6 (lower is better)
Translates to: ASLPRQSGSHLL*TFCFVPGLWGS
Trigger: GGAACCCCACAGGCCAGGTACAAAGCAGAAAGTGCATAGAAGATGTGATCCACTTTGCCTGGGAAGAGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS GCA 72 bp TTCTCCAGGAAGTTGATGTGGAAGTCTTTCACCTTCTaGAGCACCGTTTTCAGCTTCTCCACTGGAGGGAGG +
Preference number: 6 (lower is better)
Translates to: FSRKLMWKSFTF*STVFSFSTGGR
Trigger: CCTCCCTCCAGTGGAGAAGCTGAAAACGGTGCTGCAGAAGGTGAAAGACTTCCACATCAACTTCCTGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340124.9
ENST00000440783.2
ENST00000562801.5
ENST00000569193.1
CDS CAA 72 bp TTTCTGCTTTGTACCTGGCCTGTGGGGTTCCCAGGGTaGATTATGCAGAGCACCTTAGGATCACAGTGGTCT +
Preference number: 6 (lower is better)
Translates to: FLLCTWPVGFPG*IMQSTLGSQWS
Trigger: AGACCACTGTGATCCTAAGGTGCTCTGCATAATCAACCCTGGGAACCCCACAGGCCAGGTACAAAGCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340124.9
ENST00000440783.2
CDS CAA 72 bp AACGTGCGGTGCCTGGCAGCACGGCCCGCTCAACAATaGACGAATTCAATTCAACAAGTGAACCGTATTGCA +
Preference number: 6 (lower is better)
Translates to: NVRCLAARPAQQ*TNSIQQVNRIA
Trigger: TGCAATACGGTTCACTTGTTGAATTGAATTCGTCAATTGTTGAGCGGGCCGTGCTGCCAGGCACCGCACGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440783.2
CDS CAA 90 bp ATTCCTGGGACTTGGTTAAACAGGTCTTCCGTCAGCTTTGCTTTTTaGGCCAGATTACCCAGGACCGACTCCTTCTCTCGGCTGAATTGC +
Preference number: 6 (lower is better)
Translates to: IPGTWLNRSSVSFAF*ARLPRTDSFSRLNC
Trigger: GCAATTCAGCCGAGAGAAGGAGTCGGTCCTGGGTAATCTGGCCAAAAAAGCAAAGCTGACGGAAGACCTGTTTAACCAAGTCCCAGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340124.9
ENST00000440783.2
ENST00000562801.5
CDS TCA 72 bp TTGCGGAAATCCCAGATGATGACTTTGCTCCAGCTTTaGACACATGTCCCCTCTGACCCATGCGTTGACTCA +
Preference number: 6 (lower is better)
Translates to: LRKSQMMTLLQL*THVPSDPCVDS
Trigger: TGAGTCAACGCATGGGTCAGAGGGGACATGTGTTCAAAGCTGGAGCAAAGTCATCATCTGGGATTTCCGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569193.1
CDS CAA 72 bp ACTTGGTTAAACAGGTCTTCCGTCAGCTTTGCTTTTTaGGCCAGATTACCCAGGACCGACTCCTTCTCTCGG +
Preference number: 6 (lower is better)
Translates to: TWLNRSSVSFAF*ARLPRTDSFSR
Trigger: CCGAGAGAAGGAGTCGGTCCTGGGTAATCTGGCCAAAAAAGCAAAGCTGACGGAAGACCTGTTTAACCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340124.9
ENST00000440783.2
ENST00000562801.5
CDS CCA 72 bp GATTACCCAGGACCGACTCCTTCTCCTGATGAGAGATaGAAACAGCACAGCAGTCAGTATCTCTGGATAAAG +
Preference number: 6 (lower is better)
Translates to: DYPGPTPSPDER*KQHSSQYLWIK
Trigger: CTTTATCCAGAGATACTGACTGCTGTGCTGTTTCCATCTCTCATCAGGAGAAGGAGTCGGTCCTGGGTAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569193.1
CDS CAA 90 bp CAGAAAATGAGAAAAACCAGTTGTTGCCTGTCAGTCTGTATGGACTaGGCTCTGGACGGAATTCCTCAGAACATGCTTCTAGGACACATG +
Preference number: 6 (lower is better)
Translates to: QKMRKTSCCLSVCMD*ALDGIPQNMLLGHM
Trigger: CATGTGTCCTAGAAGCATGTTCTGAGGAATTCCGTCCAGAGCCAAGTCCATACAGACTGACAGGCAACAACTGGTTTTTCTCATTTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569193.1
CDS CAA 72 bp AGAAAAACCAGTTGTTGCCTGTCAGTCTGTATGGACTaGGCTCTGGACGGAATTCCTCAGAACATGCTTCTA +
Preference number: 6 (lower is better)
Translates to: RKTSCCLSVCMD*ALDGIPQNMLL
Trigger: TAGAAGCATGTTCTGAGGAATTCCGTCCAGAGCCAAGTCCATACAGACTGACAGGCAACAACTGGTTTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569193.1