RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPSM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000160360

Ensembl transcript IDs: ENST00000291775.3, ENST00000354753.7, ENST00000392944.5, ENST00000429455.5, ENST00000440944.6, ENST00000616132.4

Found 763 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCGGGGAGGCCGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATaGCCTCGGGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGG +
Preference number: 1 (lower is better)
Translates to: SGRPWGCMPSACPRQ*PREDVAVTVRPASR
Trigger: CCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACGGCCTCCCCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
3UTR GCA 90 bp GAGACCCTGTGTTCGGGCACCTGTCCCTGCTCTCGGGTGCGGCCCTaGCCCTCCAGAAGCAGGTCACCTCACCAGGCCCAGATCTGCCTC +
Preference number: 1 (lower is better)
Translates to: ETLCSGTCPCSRVRP*PSRSRSPHQAQICL
Trigger: GAGGCAGATCTGGGCCTGGTGAGGTGACCTGCTTCTGGAGGGGCAGGGCCGCACCCGAGAGCAGGGACAGGTGCCCGAACACAGGGTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
3UTR GCA 90 bp ACGTCCTGGAGACCCTGTGTTCGGGCACCTGTCCCTGCTCTCGGGTaGGGCCCTGCCCCTCCAGAAGCAGGTCACCTCACCAGGCCCAGA +
Preference number: 1 (lower is better)
Translates to: TSWRPCVRAPVPALG*GPAPPEAGHLTRPR
Trigger: TCTGGGCCTGGTGAGGTGACCTGCTTCTGGAGGGGCAGGGCCGCACCCGAGAGCAGGGACAGGTGCCCGAACACAGGGTCTCCAGGACGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
3UTR CCA 90 bp AGACAGGCTTGGAGGGAGCCCTGCCCCAGGACGAAGCTGGAGGGGTaGAGCATGCCTGTCACACGGCCATCCCAAGACCAGCTCTGGGGG +
Preference number: 1 (lower is better)
Translates to: RQAWREPCPRTKLEG*SMPVTRPSQDQLWG
Trigger: CCCCCAGAGCTGGTCTTGGGATGGCCGTGTGACAGGCATGCTCCACCCCTCCAGCTTCGTCCTGGGGCAGGGCTCCCTCCAAGCCTGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
3UTR TCA 90 bp TGTGTCTGCAGCACTGCTGACCGGCATGGGACGACCAGCGGTCCATaGATGAGGTCACCACGGTGGCCTCGCATGGCCTTGGGCCTTGCC +
Preference number: 1 (lower is better)
Translates to: CVCSTADRHGTTSGP*MRSPRWPRMALGLA
Trigger: GGCAAGGCCCAAGGCCATGCGAGGCCACCGTGGTGACCTCATTCATGGACCGCTGGTCGTCCCATGCCGGTCAGCAGTGCTGCAGACACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616132.4
3UTR TCA 90 bp TCTGCAGCACTGCTGACCGGCATGGGACGACCAGCGGTCCATGAATaGGGTCACCACGGTGGCCTCGCATGGCCTTGGGCCTTGCCTGAT +
Preference number: 1 (lower is better)
Translates to: SAALLTGMGRPAVHE*GHHGGLAWPWALPD
Trigger: ATCAGGCAAGGCCCAAGGCCATGCGAGGCCACCGTGGTGACCTCATTCATGGACCGCTGGTCGTCCCATGCCGGTCAGCAGTGCTGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616132.4
3UTR TCA 90 bp TTTTCGCTTTGCAGGGGACGTTCTGTCCTGTGTCTGCAGCACTGCTaGCCGGCATGGGACGACCAGCGGTCCATGAATGAGGTCACCACG +
Preference number: 1 (lower is better)
Translates to: FSLCRGRSVLCLQHC*PAWDDQRSMNEVTT
Trigger: CGTGGTGACCTCATTCATGGACCGCTGGTCGTCCCATGCCGGTCAGCAGTGCTGCAGACACAGGACAGAACGTCCCCTGCAAAGCGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616132.4
3UTR TCA 90 bp AAAAACAGAAAAACAAATGTACCTCTTGGGTTGGAAAGGACCCATTaGCAACATGGCACAGACGTGAGCAATAAATACGCACATACATTC +
Preference number: 1 (lower is better)
Translates to: KNRKTNVPLGLERTH*QHGTDVSNKYAHTF
Trigger: GAATGTATGTGCGTATTTATTGCTCACGTCTGTGCCATGTTGTCAATGGGTCCTTTCCAACCCAAGAGGTACATTTGTTTTTCTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR GCA 90 bp GGCCATGGGGGCCAGCCCGGGATGGAAGCACGCCCTCCCACCACGGGCAGCTTGGGCCGTGGGGCTGCATaGCCAGTGCCTGTCCTCGGC +
Preference number: 2 (lower is better)
Translates to: GHGGQPGMEARPPTTGSLGRGAA*PVPVLG
Trigger: GCCGAGGACAGGCACTGGGCATGCAGCCCCACGGCC...CAAGCTGCCCGTGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCCCATGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR CCA 90 bp GAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCCTGCGGGTCGGGGAGGCCGTaGGGCTGCATGCCCAGTGCC +
Preference number: 2 (lower is better)
Translates to: ESDSTRSGPTCRRPRPACGSGRP*GCMPSA
Trigger: GGCACTGGGCATGCAGCCCCACGGCCTCCCCGACCC...GCAGGCCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR CCA 90 bp TGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCTGAGCCTGTCGCCCTaGGTCGGGGAGGCCGTGGGG +
Preference number: 2 (lower is better)
Translates to: CGSLTAPGRGRHAEGPVRLSLSP*VGEAVG
Trigger: CCCCACGGCCTCCCCGACCCAGGGCGACAGGCTCAG...CCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR CCA 90 bp CCCCAGGCACATAGGGCTCCCACAGCCCAGCCCAGCCCAGCCCAGCCCAGCCCTAGGGGGAGGTGGGGGTaGAGGCCCTGGAGCAGCCAG +
Preference number: 2 (lower is better)
Translates to: PQAHRAPTAQPSPAQPSPRGRWG*RPWSSQ
Trigger: CTGGCTGCTCCAGGGCCTCCACCCCCACCTCCCCCT...AGGGCTGGGCTGGGCTGGGCTGGGCTGGGCTGTGGGAGCCCTATGTGCCTGGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000616132.4
3UTR-3UTR CCA 90 bp GGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGCTGAGCCTGTCGCCCTaGGTCGGGGAGGCCGTGGGG +
Preference number: 2 (lower is better)
Translates to: GKGLGERMRESDSTRSGPLSLSP*VGEAVG
Trigger: CCCCACGGCCTCCCCGACCCAGGGCGACAGGCTCAG...CGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR CCA 90 bp TGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGGGGGCCAGCCCGGGATaGAAGCACGCCCTCCCACCA +
Preference number: 2 (lower is better)
Translates to: CGSLTAPGRGRHAEGPVRGASPG*KHALPP
Trigger: TGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCC...CCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCA
72% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR TCA 90 bp ATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGACGGGCAGCTTGGCCTaGGCCTGTCGCCCTGGGTCG +
Preference number: 2 (lower is better)
Translates to: MRESDSTRSGPTCRRPRPTGSLA*ACRPGS
Trigger: CGACCCAGGGCGACAGGCTCAGGCCAAGCTGCCCGT...CGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR CCA 90 bp ACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCTGAGCCTGTCGCCCTaGGTCGGGGAGGCCGTGGGG +
Preference number: 2 (lower is better)
Translates to: TGRAWGRGCGSLTAPGRGLSLSP*VGEAVG
Trigger: CCCCACGGCCTCCCCGACCCAGGGCGACAGGCTCAG...GCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR CCA 90 bp GGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGGGGGCCAGCCCGGGATaGAAGCACGCCCTCCCACCA +
Preference number: 2 (lower is better)
Translates to: GKGLGERMRESDSTRSGPGASPG*KHALPP
Trigger: TGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCC...CGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR CCA 90 bp ATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGGGGCCAGCCCGGGATaGAAGCACGCCCTCCCACCA +
Preference number: 2 (lower is better)
Translates to: MRESDSTRSGPTCRRPRPGASPG*KHALPP
Trigger: TGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCC...CGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR TCA 90 bp GTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCTGTGGGACGGGCAGCTTGGCCTaGGCCTGTCGCCCTGGGTCG +
Preference number: 2 (lower is better)
Translates to: VGPRGTLLDGTASPGGCGTGSLA*ACRPGS
Trigger: CGACCCAGGGCGACAGGCTCAGGCCAAGCTGCCCGT...CCCACAGCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR TCA 90 bp ACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCACGGGCAGCTTGGCCTaGGCCTGTCGCCCTGGGTCG +
Preference number: 2 (lower is better)
Translates to: TGRAWGRGCGSLTAPGRGTGSLA*ACRPGS
Trigger: CGACCCAGGGCGACAGGCTCAGGCCAAGCTGCCCGT...GCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR GCA 90 bp GGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCGGCCGTGGGGCTGCATaGCCAGTGCCTGTCCTCGGC +
Preference number: 2 (lower is better)
Translates to: GLGERMRESDSTRSGPTCGRGAA*PVPVLG
Trigger: GCCGAGGACAGGCACTGGGCATGCAGCCCCACGGCC...GCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR GCA 90 bp GGGGCCATGGTAGGGCCCTTGGCAGTCTTGGGAGGTGCCAAGGCTGGGTCTGGAAGGTCGGGGCCGACATaGCGAAGGCCCCGTCCGGCC +
Preference number: 2 (lower is better)
Translates to: GAMVGPLAVLGGAKAGSGRSGPT*RRPRPA
Trigger: GGCCGGACGGGGCCTTCGGCATGTCGGCCCCGACCT...TCCAGACCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCCCTACCATGGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR CCA 90 bp GAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCCTGCGCCTGTCCTCGGCAATaGCCTCGGGAGGACGTGGCT +
Preference number: 2 (lower is better)
Translates to: ESDSTRSGPTCRRPRPACACPRQ*PREDVA
Trigger: AGCCACGTCCTCCCGAGGCCATTGCCGAGGACAGGC...GCAGGCCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR CCA 90 bp GGGGCCATGGTAGGGCCCTTGGCAGTCTTGGGAGGTGCCAAGGCTGGGTCTGGACTGAGCCTGTCGCCCTaGGTCGGGGAGGCCGTGGGG +
Preference number: 2 (lower is better)
Translates to: GAMVGPLAVLGGAKAGSGLSLSP*VGEAVG
Trigger: CCCCACGGCCTCCCCGACCCAGGGCGACAGGCTCAG...TCCAGACCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCCCTACCATGGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR TCA 90 bp AACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGACGGGCAGCTTGGCCTaGGCCTGTCGCCCTGGGTCG +
Preference number: 2 (lower is better)
Translates to: NGKGLGERMRESDSTRSGTGSLA*ACRPGS
Trigger: CGACCCAGGGCGACAGGCTCAGGCCAAGCTGCCCGT...CCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR CCA 90 bp AACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGGGGGCCAGCCCGGGATaGAAGCACGCCCTCCCACCA +
Preference number: 2 (lower is better)
Translates to: NGKGLGERMRESDSTRSGGASPG*KHALPP
Trigger: TGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCC...CCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTT
69% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR GCA 90 bp CCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAAGGTCGGGGCCGACATaGCGAAGGCCCCGTCCGGCC +
Preference number: 2 (lower is better)
Translates to: PLGRVGETAGFHIWQGRARSGPT*RRPRPA
Trigger: GGCCGGACGGGGCCTTCGGCATGTCGGCCCCGACCT...TGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR CCA 90 bp AGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGCCTGTCCTCGGCAATaGCCTCGGGAGGACGTGGCT +
Preference number: 2 (lower is better)
Translates to: RGCGSLTAPGRGRHAEGPACPRQ*PREDVA
Trigger: AGCCACGTCCTCCCGAGGCCATTGCCGAGGACAGGC...GGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR CCA 90 bp CCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAGGGTCGGGGAGGCCGTaGGGCTGCATGCCCAGTGCC +
Preference number: 2 (lower is better)
Translates to: PLGRVGETAGFHIWQGRAGSGRP*GCMPSA
Trigger: GGCACTGGGCATGCAGCCCCACGGCCTCCCCGACCC...TGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR TCA 90 bp CTGAGAGTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCGCCTTCTGTGGTTGCTaGCCTCTGGCCGGGGAGTGG +
Preference number: 2 (lower is better)
Translates to: LRVGPRGTLLDGTASPGGAFCGC*PLAGEW
Trigger: CCACTCCCCGGCCAGAGGTCAGCAACCACAGAAGGC...GCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCACTCTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR GCA 90 bp GACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAGAACGGGAAGGGCTTGGGGGGGCCGTGGGGCTGCATaGCCAGTGCCTGTCCTCGGC +
Preference number: 2 (lower is better)
Translates to: DSRVSHLAGQGRTGRAWGGRGAA*PVPVLG
Trigger: GCCGAGGACAGGCACTGGGCATGCAGCCCCACGGCC...CCCCCAAGCCCTTCCCGTTCTGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTC
67% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR GCA 90 bp CTGAGAGTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCGCTTGGAGGGAGCCCTaGCCCAGGACGAAGCTGGAG +
Preference number: 2 (lower is better)
Translates to: LRVGPRGTLLDGTASPGGAWREP*PRTKLE
Trigger: CTCCAGCTTCGTCCTGGGGCAGGGCTCCCTCCAAGC...GCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCACTCTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR CCA 90 bp AACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGGCCTGTCCTCGGCAATaGCCTCGGGAGGACGTGGCT +
Preference number: 2 (lower is better)
Translates to: NGKGLGERMRESDSTRSGACPRQ*PREDVA
Trigger: AGCCACGTCCTCCCGAGGCCATTGCCGAGGACAGGC...CCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR CCA 90 bp GGGGCCATGGTAGGGCCCTTGGCAGTCTTGGGAGGTGCCAAGGCTGGGTCTGGAGCCCCAGGACGAAGCTaGAGGGGTGGAGCATGCCTG +
Preference number: 2 (lower is better)
Translates to: GAMVGPLAVLGGAKAGSGAPGRS*RGGACL
Trigger: CAGGCATGCTCCACCCCTCCAGCTTCGTCCTGGGGC...TCCAGACCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCCCTACCATGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR TCA 90 bp CCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAGAGGATGCGGGAGTCTaGCAGCACCAGGTCGGGGCC +
Preference number: 2 (lower is better)
Translates to: PLGRVGETAGFHIWQGRAEDAGV*QHQVGA
Trigger: GGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTC...TGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR GCA 90 bp GGGGCCATGGTAGGGCCCTTGGCAGTCTTGGGAGGTGCCAAGGCTGGGTCTGGATGGAGGGGTGGAGCATaGCTGTCACACGGCCATCCC +
Preference number: 2 (lower is better)
Translates to: GAMVGPLAVLGGAKAGSGWRGGA*LSHGHP
Trigger: GGGATGGCCGTGTGACAGGCATGCTCCACCCCTCCA...TCCAGACCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCCCTACCATGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR CCA 90 bp CTGAGAGTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCACATGGCCCTGTCCTTaGTGGCCCCAAGAGGCGGCT +
Preference number: 2 (lower is better)
Translates to: LRVGPRGTLLDGTASPGGTWPCP*WPQEAA
Trigger: AGCCGCCTCTTGGGGCCACCAAGGACAGGGCCATGT...GCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCACTCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR CCA 90 bp GGCAGGCATCCCTTCTCGGGGGCTGGCAAACTCAAGACCTTTGGGAGTGGGGGATGGGGGTGGAGGCCCTaGAGCAGCCAGTGGGGCAAC +
Preference number: 2 (lower is better)
Translates to: GRHPFSGAGKLKTFGSGGWGWRP*SSQWGN
Trigger: GTTGCCCCACTGGCTGCTCCAGGGCCTCCACCCCCA...TCCCCCACTCCCAAAGGTCTTGAGTTTGCCAGCCCCCGAGAAGGGATGCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000616132.4
3UTR-3UTR GCA 90 bp GTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCTGTGGGCCCAGCCATTCCCTCTaGTTTAGAGATAGGCCCGGC +
Preference number: 2 (lower is better)
Translates to: VGPRGTLLDGTASPGGCGPSHSL*FRDRPG
Trigger: GCCGGGCCTATCTCTAAAGCAGAGGGAATGGCTGGG...CCCACAGCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR GCA 90 bp GGTCACCACGGTGGCCTCGCATGGCCTTGGGCCTTGCCTGATTACTGCCCCAGGTTCATCCAGCAGCCCTaGAGCGCCACTCAGGATGCG +
Preference number: 2 (lower is better)
Translates to: GHHGGLAWPWALPDYCPRFIQQP*SATQDA
Trigger: CGCATCCTGAGTGGCGCTGCAGGGCTGCTGGATGAA...CCTGGGGCAGTAATCAGGCAAGGCCCAAGGCCATGCGAGGCCACCGTGGTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
3UTR-3UTR CCA 90 bp CTGAGAGTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCAGAACGGGAAGGGCTTaGGGGAGAGGATGCGGGAGT +
Preference number: 2 (lower is better)
Translates to: LRVGPRGTLLDGTASPGGRTGRA*GRGCGS
Trigger: ACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTTCT...GCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCACTCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR CCA 90 bp GGGGCCATGGTAGGGCCCTTGGCAGTCTTGGGAGGTGCCAAGGCTGGGTCTGGATCCCAAGACCAGCTCTaGGGGGACAGAACATGGCCC +
Preference number: 2 (lower is better)
Translates to: GAMVGPLAVLGGAKAGSGSQDQL*GDRTWP
Trigger: GGGCCATGTTCTGTCCCCCCAGAGCTGGTCTTGGGA...TCCAGACCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCCCTACCATGGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR GCA 90 bp CTGAGAGTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCCCCAGCCATTCCCTCTaGTTTAGAGATAGGCCCGGC +
Preference number: 2 (lower is better)
Translates to: LRVGPRGTLLDGTASPGGPSHSL*FRDRPG
Trigger: GCCGGGCCTATCTCTAAAGCAGAGGGAATGGCTGGG...GCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCACTCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR CCA 90 bp GGGGCCATGGTAGGGCCCTTGGCAGTCTTGGGAGGTGCCAAGGCTGGGTCTGGAGCAGGGTTTCACATTTaGCAGGGCAGGGCAGAACGG +
Preference number: 2 (lower is better)
Translates to: GAMVGPLAVLGGAKAGSGAGFHI*QGRAER
Trigger: CCGTTCTGCCCTGCCCTGCCAAATGTGAAACCCTGC...TCCAGACCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCCCTACCATGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR CCA 90 bp GCAGGCATCCCTTCTCGGGGGCTGGCAAACTCAAGACCTTTGGGAGTGGGGGACCACGGTGGCCTCGCATaGCCTTGGGCCTTGCCTGAT +
Preference number: 2 (lower is better)
Translates to: AGIPSRGLANSRPLGVGDHGGLA*PWALPD
Trigger: ATCAGGCAAGGCCCAAGGCCATGCGAGGCCACCGTG...GTCCCCCACTCCCAAAGGTCTTGAGTTTGCCAGCCCCCGAGAAGGGATGCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000616132.4
3UTR-3UTR CCA 90 bp GGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTAGAACGGGAAGGGCTTaGGGGAGAGGATGCGGGAGT +
Preference number: 2 (lower is better)
Translates to: GGSETPLGRVGETAGFHIRTGRA*GRGCGS
Trigger: ACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTTCT...AATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR CCA 90 bp TACGTTCTGGGAGGCAGGCATCCCTTCTCGGGGGCTGGCAAACTCAAGACCTTTATGAGGTCACCACGGTaGCCTCGCATGGCCTTGGGC +
Preference number: 2 (lower is better)
Translates to: YVLGGRHPFSGAGKLKTFMRSPR*PRMALG
Trigger: GCCCAAGGCCATGCGAGGCCACCGTGGTGACCTCAT...AAAGGTCTTGAGTTTGCCAGCCCCCGAGAAGGGATGCCTGCCTCCCAGAACGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616132.4
3UTR-3UTR TCA 90 bp TTCGCTTTGCAGGGGACGTTCTGTCCTGTGTCTGCAGCACTGCTGACCGGCATGTCTCCTACTTGGGTCTaGGGACAGAAGCCCTCCCTG +
Preference number: 2 (lower is better)
Translates to: FALQGTFCPVSAALLTGMSPTWV*GQKPSL
Trigger: CAGGGAGGGCTTCTGTCCTCAGACCCAAGTAGGAGA...CATGCCGGTCAGCAGTGCTGCAGACACAGGACAGAACGTCCCCTGCAAAGCGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
3UTR-3UTR GCA 90 bp CTGGGAGGCAGGCATCCCTTCTCGGGGGCTGGCAAACTCAAGACCTTTGGGAGTGTTCTGTCCTGTGTCTaGAGCACTGCTGACCGGCAT +
Preference number: 2 (lower is better)
Translates to: LGGRHPFSGAGKLKTFGSVLSCV*STADRH
Trigger: ATGCCGGTCAGCAGTGCTGCAGACACAGGACAGAAC...ACTCCCAAAGGTCTTGAGTTTGCCAGCCCCCGAGAAGGGATGCCTGCCTCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616132.4
3UTR-3UTR CCA 90 bp TACGTTCTGGGAGGCAGGCATCCCTTCTCGGGGGCTGGCAAACTCAAGACCTTTCACTCAGGATGCGGGTaGGAAGGGCTCAGGGTGAAC +
Preference number: 2 (lower is better)
Translates to: YVLGGRHPFSGAGKLKTFHSGCG*EGLRVN
Trigger: GTTCACCCTGAGCCCTTCCCACCCGCATCCTGAGTG...AAAGGTCTTGAGTTTGCCAGCCCCCGAGAAGGGATGCCTGCCTCCCAGAACGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616132.4
3UTR-3UTR CCA 90 bp ATTAGTCTTTTCGCTTTGCAGGGGACGTTCTGTCCTGTGTCTGCAGCACTGCTGCCCAGCCCAGCCCTCTaGCTGATGCCCTCTCGCCTC +
Preference number: 2 (lower is better)
Translates to: ISLFALQGTFCPVSAALLPSPAL*LMPSRL
Trigger: GAGGCGAGAGGGCATCAGCCAGAGGGCTGGGCTGGG...CAGCAGTGCTGCAGACACAGGACAGAACGTCCCCTGCAAAGCGAAAAGACTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616132.4
3UTR-3UTR TCA 90 bp ATTAGTCTTTTCGCTTTGCAGGGGACGTTCTGTCCTGTGTCTGCAGCACTGCTGGCCTTGGGCCTTGCCTaGTTACTGCCCCAGGCACAT +
Preference number: 2 (lower is better)
Translates to: ISLFALQGTFCPVSAALLALGLA*LLPQAH
Trigger: ATGTGCCTGGGGCAGTAATCAGGCAAGGCCCAAGGC...CAGCAGTGCTGCAGACACAGGACAGAACGTCCCCTGCAAAGCGAAAAGACTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616132.4
3UTR-3UTR GCA 90 bp TACGTTCTGGGAGGCAGGCATCCCTTCTCGGGGGCTGGCAAACTCAAGACCTTTTTAGTCTTTTCGCTTTaGAGGGGACGTTCTGTCCTG +
Preference number: 2 (lower is better)
Translates to: YVLGGRHPFSGAGKLKTFLVFSL*RGRSVL
Trigger: CAGGACAGAACGTCCCCTGCAAAGCGAAAAGACTAA...AAAGGTCTTGAGTTTGCCAGCCCCCGAGAAGGGATGCCTGCCTCCCAGAACGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000616132.4
3UTR-3UTR CAA 90 bp GTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCTGTGGGCAGAACGGGAAGGGCTaGGGGGAGAGGATGCGGGAG +
Preference number: 3 (lower is better)
Translates to: VGPRGTLLDGTASPGGCGQNGKG*GERMRE
Trigger: CTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTTCTG...CCCACAGCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
3UTR GCA 72 bp AGACCCTGTGTTCGGGCACCTGTCCCTGCTCTCGGGTaGGGCCCTGCCCCTCCAGAAGCAGGTCACCTCACC +
Preference number: 3 (lower is better)
Translates to: RPCVRAPVPALG*GPAPPEAGHLT
Trigger: GGTGAGGTGACCTGCTTCTGGAGGGGCAGGGCCGCACCCGAGAGCAGGGACAGGTGCCCGAACACAGGGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
3UTR GCA 72 bp TACGTCCTGGAGACCCTGTGTTCGGGCACCTGTCCCTaGTCTCGGGTGCGGCCCTGCCCCTCCAGAAGCAGG +
Preference number: 3 (lower is better)
Translates to: YVLETLCSGTCP*SRVRPCPSRSR
Trigger: CCTGCTTCTGGAGGGGCAGGGCCGCACCCGAGAGCAGGGACAGGTGCCCGAACACAGGGTCTCCAGGACGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
3UTR CCA 72 bp CCGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATaGCCTCGGGAGGACGTGGCTGTGACTGTGAGACCG +
Preference number: 3 (lower is better)
Translates to: PWGCMPSACPRQ*PREDVAVTVRP
Trigger: CGGTCTCACAGTCACAGCCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR CAA 90 bp GTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCTGTGGGCCTAGGATCCCGAACTaGGTGCCCTGTGAGCCCCCT +
Preference number: 3 (lower is better)
Translates to: VGPRGTLLDGTASPGGCGPRIPN*VPCEPP
Trigger: AGGGGGCTCACAGGGCACCAAGTTCGGGATCCTAGG...CCCACAGCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
3UTR TCA 72 bp CTGCTGACCGGCATGGGACGACCAGCGGTCCATGAATaGGGTCACCACGGTGGCCTCGCATGGCCTTGGGCC +
Preference number: 3 (lower is better)
Translates to: LLTGMGRPAVHE*GHHGGLAWPWA
Trigger: GGCCCAAGGCCATGCGAGGCCACCGTGGTGACCTCATTCATGGACCGCTGGTCGTCCCATGCCGGTCAGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616132.4
3UTR GCA 72 bp AGCCCTGCCCCAGGACGAAGCTGGAGGGGTGGAGCATaGCTGTCACACGGCCATCCCAAGACCAGCTCTGGG +
Preference number: 3 (lower is better)
Translates to: SPAPGRSWRGGA*LSHGHPKTSSG
Trigger: CCCAGAGCTGGTCTTGGGATGGCCGTGTGACAGGCATGCTCCACCCCTCCAGCTTCGTCCTGGGGCAGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
3UTR GCA 72 bp GGTGGCCTCGCATGGCCTTGGGCCTTGCCTGATTACTaGCCCAGGCACATAGGGCTCCCACAGCCCAGCCCA +
Preference number: 3 (lower is better)
Translates to: GGLAWPWALPDY*PRHIGLPQPSP
Trigger: TGGGCTGGGCTGTGGGAGCCCTATGTGCCTGGGGCAGTAATCAGGCAAGGCCCAAGGCCATGCGAGGCCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616132.4
3UTR CCA 72 bp TGGAGGGAGCCCTGCCCCAGGACGAAGCTGGAGGGGTaGAGCATGCCTGTCACACGGCCATCCCAAGACCAG +
Preference number: 3 (lower is better)
Translates to: WREPCPRTKLEG*SMPVTRPSQDQ
Trigger: CTGGTCTTGGGATGGCCGTGTGACAGGCATGCTCCACCCCTCCAGCTTCGTCCTGGGGCAGGGCTCCCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR CAA 90 bp GGGGCCATGGTAGGGCCCTTGGCAGTCTTGGGAGGTGCCAAGGCTGGGTCTGGAGGCTCAGAGACACCTTaGGGGAGGGTGGGGGAGACA +
Preference number: 3 (lower is better)
Translates to: GAMVGPLAVLGGAKAGSGGSETP*GRVGET
Trigger: TGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCC...TCCAGACCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCCCTACCATGGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
3UTR GCA 72 bp ACAGGCGACCACCTCCTGTCCTTCATCCAGCAGCCCTaGAGCGCCACTCAGGATGCGGGTGGGAAGGGCTCA +
Preference number: 3 (lower is better)
Translates to: TGDHLLSFIQQP*SATQDAGGKGS
Trigger: TGAGCCCTTCCCACCCGCATCCTGAGTGGCGCTGCAGGGCTGCTGGATGAAGGACAGGAGGTGGTCGCCTGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616132.4
3UTR TCA 72 bp AGCACTGCTGACCGGCATGGGACGACCAGCGGTCCATaGATGAGGTCACCACGGTGGCCTCGCATGGCCTTG +
Preference number: 3 (lower is better)
Translates to: STADRHGTTSGP*MRSPRWPRMAL
Trigger: CAAGGCCATGCGAGGCCACCGTGGTGACCTCATTCATGGACCGCTGGTCGTCCCATGCCGGTCAGCAGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616132.4
3UTR GCA 72 bp CAGCAGGTCCTGCCAGTCCTAGGATCCCGAACTTGGTaGCCTGTGAGCCCCCTCCCCATGGAGAGAGCAGTG +
Preference number: 3 (lower is better)
Translates to: QQVLPVLGSRTW*PVSPLPMERAV
Trigger: CACTGCTCTCTCCATGGGGAGGGGGCTCACAGGGCACCAAGTTCGGGATCCTAGGACTGGCAGGACCTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
3UTR CCA 72 bp AGCATGCCTGTCACACGGCCATCCCAAGACCAGCTCTaGGGGGACAGAACATGGCCCTGTCCTTGGTGGCCC +
Preference number: 3 (lower is better)
Translates to: SMPVTRPSQDQL*GDRTWPCPWWP
Trigger: GGGCCACCAAGGACAGGGCCATGTTCTGTCCCCCCAGAGCTGGTCTTGGGATGGCCGTGTGACAGGCATGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
3UTR-3UTR CAA 90 bp GTTCTGTCCTGTGTCTGCAGCACTGCTGACCGGCATGGGACGACCAGCGGTCCAGCAGCCCTCTCCTACTaGGGTCTGAGGACAGAAGCC +
Preference number: 3 (lower is better)
Translates to: VLSCVCSTADRHGTTSGPAALSY*GLRTEA
Trigger: GGCTTCTGTCCTCAGACCCAAGTAGGAGAGGGCTGC...TGGACCGCTGGTCGTCCCATGCCGGTCAGCAGTGCTGCAGACACAGGACAGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616132.4
3UTR TCA 72 bp TGCAGGGGACGTTCTGTCCTGTGTCTGCAGCACTGCTaGCCGGCATGGGACGACCAGCGGTCCATGAATGAG +
Preference number: 3 (lower is better)
Translates to: CRGRSVLCLQHC*PAWDDQRSMNE
Trigger: CTCATTCATGGACCGCTGGTCGTCCCATGCCGGTCAGCAGTGCTGCAGACACAGGACAGAACGTCCCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
3UTR GCA 72 bp TCTTTTCGCTTTGCAGGGGACGTTCTGTCCTGTGTCTaGAGCACTGCTGACCGGCATGGGACGACCAGCGGT +
Preference number: 3 (lower is better)
Translates to: SFRFAGDVLSCV*STADRHGTTSG
Trigger: ACCGCTGGTCGTCCCATGCCGGTCAGCAGTGCTGCAGACACAGGACAGAACGTCCCCTGCAAAGCGAAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616132.4
3UTR CCA 72 bp GTACGTTCTGGGAGGCAGGCATCCCTTCTCGGGGGCTaGCAAACTCAAGACCTTTGGGAGTGGGGGACACAT +
Preference number: 3 (lower is better)
Translates to: VRSGRQASLLGG*QTQDLWEWGTH
Trigger: ATGTGTCCCCCACTCCCAAAGGTCTTGAGTTTGCCAGCCCCCGAGAAGGGATGCCTGCCTCCCAGAACGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000616132.4
3UTR GCA 72 bp TTTGGAATGTCGAAGTTCATGCCCAGCCATTCCCTCTaGTTTAGAGATAGGCCCGGCTCCTGTCGAGGCCCC +
Preference number: 3 (lower is better)
Translates to: FGMSKFMPSHSL*FRDRPGSCRGP
Trigger: GGGGCCTCGACAGGAGCCGGGCCTATCTCTAAAGCAGAGGGAATGGCTGGGCATGAACTTCGACATTCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
3UTR TCA 72 bp AAAACAAATGTACCTCTTGGGTTGGAAAGGACCCATTaGCAACATGGCACAGACGTGAGCAATAAATACGCA +
Preference number: 3 (lower is better)
Translates to: KTNVPLGLERTH*QHGTDVSNKYA
Trigger: TGCGTATTTATTGCTCACGTCTGTGCCATGTTGTCAATGGGTCCTTTCCAACCCAAGAGGTACATTTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp CCCACAGCCCAGCCCAGCCCAGCCCAGCCCAGCCCTCTGGCTGATGCCCTCTCGACATCGGGCGGCAGGTaGCCGGGGTCCTGCGTGGCG +
Preference number: 4 (lower is better)
Translates to: PTAQPSPAQPSPLADALSTSGGR*PGSCVA
Trigger: CGCCACGCAGGACCCCGGGCACCTGCCGCCCGATGT...CGAGAGGGCATCAGCCAGAGGGCTGGGCTGGGCTGGGCTGGGCTGGGCTGTGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp GGCCATGGGGGCCAGCCCGGGATGGAAGCACGCCCTCCCACCACGGGCAGCTTGCTGAGCCTGTCGCCCTaGGTCGGGGAGGCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: GHGGQPGMEARPPTTGSLLSLSP*VGEAVG
Trigger: CCCCACGGCCTCCCCGACCCAGGGCGACAGGCTCAG...CAAGCTGCCCGTGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCCCATGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGCCATGGGGGCCAGCCCGGGATGGAAGCACGCCCTCCCACCACGGGCAGCTTGTGGAGTAGAGGCGCCTaGCGGCCGGGCCCGGGAGCT +
Preference number: 4 (lower is better)
Translates to: GHGGQPGMEARPPTTGSLWSRGA*RPGPGA
Trigger: AGCTCCCGGGCCCGGCCGCCAGGCGCCTCTACTCCA...CAAGCTGCCCGTGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCCCATGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440944.6
CDS-3UTR TCA 90 bp GGCCATGGGGGCCAGCCCGGGATGGAAGCACGCCCTCCCACCACGGGCAGCTTGCGTTCATGCGGGCCGTaGGCTCCCCATGGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: GHGGQPGMEARPPTTGSLRSCGP*APHGGP
Trigger: GGGACCGCCATGGGGAGCTCACGGCCCGCATGAACG...CAAGCTGCCCGTGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCCCATGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR TCA 90 bp CCCACAGCCCAGCCCAGCCCAGCCCAGCCCAGCCCTCTGGCTGATGCCCTCTCGCCCCTCCGCAGCTCCTaGTGCGGTCCGTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: PTAQPSPAQPSPLADALSPLRSS*CGPCLW
Trigger: CCACAGGCACGGACCGCATCAGGAGCTGCGGAGGGG...CGAGAGGGCATCAGCCAGAGGGCTGGGCTGGGCTGGGCTGGGCTGGGCTGTGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR GCA 90 bp GAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCCTGCAGGTCGGGGCCGACATaGCGAAGGCCCCGTCCGGCC +
Preference number: 4 (lower is better)
Translates to: ESDSTRSGPTCRRPRPACRSGPT*RRPRPA
Trigger: GGCCGGACGGGGCCTTCGGCATGTCGGCCCCGACCT...GCAGGCCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp TGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGACATCGGGCGGCAGGTaGCCGGGGTCCTGCGTGGCG +
Preference number: 4 (lower is better)
Translates to: CGSLTAPGRGRHAEGPVRTSGGR*PGSCVA
Trigger: CGCCACGCAGGACCCCGGGCACCTGCCGCCCGATGT...CCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp TGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGGCAGGCTGCCCACGCTaGCCCGCTGGTCGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: CGSLTAPGRGRHAEGPVRAGCPR*PAGRPA
Trigger: GGCTGGACGACCAGCGGGCCAGCGTGGGCAGCCTGC...CCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCCTGCGCAGGCTGCCCACGCTaGCCCGCTGGTCGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: ESDSTRSGPTCRRPRPACAGCPR*PAGRPA
Trigger: GGCTGGACGACCAGCGGGCCAGCGTGGGCAGCCTGC...GCAGGCCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGCCATGGGGGCCAGCCCGGGATGGAAGCACGCCCTCCCACCACGGGCAGCTTGGGGGCCAGCCCGGGATaGAAGCACGCCCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: GHGGQPGMEARPPTTGSLGASPG*KHALPP
Trigger: TGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCC...CAAGCTGCCCGTGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCCCATGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGCCATGGGGGCCAGCCCGGGATGGAAGCACGCCCTCCCACCACGGGCAGCTTGAGCAGGTGCCGCAGGTaGTACTCGGCCGCGCGCTCG +
Preference number: 4 (lower is better)
Translates to: GHGGQPGMEARPPTTGSLSRCRR*YSAARS
Trigger: CGAGCGCGCGGCCGAGTACCACCTGCGGCACCTGCT...CAAGCTGCCCGTGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCCCATGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp GGCCATGGGGGCCAGCCCGGGATGGAAGCACGCCCTCCCACCACGGGCAGCTTGGTAGCGAGTCCCTGCTaGGCCCCCGCCAGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: GHGGQPGMEARPPTTGSLVASPC*APASPL
Trigger: CAGGGGACTGGCGGGGGCCCAGCAGGGACTCGCTAC...CAAGCTGCCCGTGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCCCATGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp GGGAGGCCGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGCTGTCCAGCGGGGAGTaGCTGCCCTCCCGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GRPWGCMPSACPRQWPRELSSGE*LPSRGL
Trigger: GAGGCCCCGGGAGGGCAGCCACTCCCCGCTGGACAG...CTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACGGCCTCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp ATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCACCAGGCTGGCACTaGTGCTGGGGCTCGGGCGGG +
Preference number: 4 (lower is better)
Translates to: MRESDSTRSGPTCRRPRPAPGWH*CWGSGG
Trigger: CCCGCCCGAGCCCCAGCAGCAGTGCCAGCCTGGTGC...CGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp GGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGGCACCAGGCTGGCACTaGTGCTGGGGCTCGGGCGGG +
Preference number: 4 (lower is better)
Translates to: GKGLGERMRESDSTRSGPAPGWH*CWGSGG
Trigger: CCCGCCCGAGCCCCAGCAGCAGTGCCAGCCTGGTGC...CGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp CGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGACGTGGGCACCAGGCTGGCACTaGTGCTGGGGCTCGGGCGGG +
Preference number: 4 (lower is better)
Translates to: RGAACPVPVLGNGLGRTWAPGWH*CWGSGG
Trigger: CCCGCCCGAGCCCCAGCAGCAGTGCCAGCCTGGTGC...CCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp GGGAGGCCGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGGCCGTGGGGCTGCATaGCCAGTGCCTGTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: GRPWGCMPSACPRQWPREGRGAA*PVPVLG
Trigger: GCCGAGGACAGGCACTGGGCATGCAGCCCCACGGCC...CTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACGGCCTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp GGGAGGCCGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGTCCTGTCGAGGCCCCTaGAGGGCCCTGGGACTCGGC +
Preference number: 4 (lower is better)
Translates to: GRPWGCMPSACPRQWPRESCRGP*RALGLG
Trigger: GCCGAGTCCCAGGGCCCTGCAGGGGCCTCGACAGGA...CTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACGGCCTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp GAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCCTGCTCGGGCACCTGTCCCTaGTCTCGGGTGCGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: ESDSTRSGPTCRRPRPACSGTCP*SRVRPC
Trigger: GCAGGGCCGCACCCGAGAGCAGGGACAGGTGCCCGA...GCAGGCCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp TGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGTCGGGCACCTGTCCCTaGTCTCGGGTGCGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: CGSLTAPGRGRHAEGPVRSGTCP*SRVRPC
Trigger: GCAGGGCCGCACCCGAGAGCAGGGACAGGTGCCCGA...CCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp GGCCATGGGGGCCAGCCCGGGATGGAAGCACGCCCTCCCACCACGGGCAGCTTGCCTTGGCCTCCCCCATaGGGTCACCGATGGTCCGCG +
Preference number: 4 (lower is better)
Translates to: GHGGQPGMEARPPTTGSLPWPPP*GHRWSA
Trigger: CGCGGACCATCGGTGACCGCATGGGGGAGGCCAAGG...CAAGCTGCCCGTGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCCCATGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp GCCTCGGGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGACATCGGGCGGCAGGTaGCCGGGGTCCTGCGTGGCG +
Preference number: 4 (lower is better)
Translates to: ASGGRGCDCETGVQEWGQTSGGR*PGSCVA
Trigger: CGCCACGCAGGACCCCGGGCACCTGCCGCCCGATGT...CTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCCCGAGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp CCCCAGGCACATAGGGCTCCCACAGCCCAGCCCAGCCCAGCCCAGCCCAGCCCTGGGTGTTGCCCAGGTTaGCGTAGGCCCTGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: PQAHRAPTAQPSPAQPSPGCCPG*RRPCPA
Trigger: CGCAGGGCAGGGCCTACGGCAACCTGGGCAACACCC...AGGGCTGGGCTGGGCTGGGCTGGGCTGGGCTGTGGGAGCCCTATGTGCCTGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR GCA 90 bp CGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGACGTGGGGGGTAGCGAGTCCCTaGTGGGCCCCCGCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: RGAACPVPVLGNGLGRTWGVASP*WAPASP
Trigger: GGGACTGGCGGGGGCCCAGCAGGGACTCGCTACCCC...CCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACG
72% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp TGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCTCGTGCGTGGCACGTaGACCCGGACGTCGGCGCTG +
Preference number: 4 (lower is better)
Translates to: CGSLTAPGRGRHAEGPVRLVRGT*TRTSAL
Trigger: CAGCGCCGACGTCCGGGTGCACGTGCCACGCACGAG...CCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp GGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGTCCTGTCCTCCAGGGTaGGGGCGGCCGTGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: GGRGCDCETGVQEWGQGGSCPPG*GRPWPR
Trigger: CCGAGGCCACGGCCGCCCCCACCCTGGAGGACAGGA...CCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGTCCTGTCCTCCAGGGTaGGGGCGGCCGTGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: GKGLGERMRESDSTRSGPSCPPG*GRPWPR
Trigger: CCGAGGCCACGGCCGCCCCCACCCTGGAGGACAGGA...CGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCCTGCGGGTGGGCCTGGCGGTaGGCACAGGGCCTTAGCTCG +
Preference number: 4 (lower is better)
Translates to: ESDSTRSGPTCRRPRPACGWAWR*AQGLSS
Trigger: CGAGCTAAGGCCCTGTGCCCACCGCCAGGCCCACCC...GCAGGCCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp TGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGGGGTGGGCCTGGCGGTaGGCACAGGGCCTTAGCTCG +
Preference number: 4 (lower is better)
Translates to: CGSLTAPGRGRHAEGPVRGWAWR*AQGLSS
Trigger: CGAGCTAAGGCCCTGTGCCCACCGCCAGGCCCACCC...CCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGGAGGCCGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGGGTGGGCCTGGCGGTaGGCACAGGGCCTTAGCTCG +
Preference number: 4 (lower is better)
Translates to: GRPWGCMPSACPRQWPREGWAWR*AQGLSS
Trigger: CGAGCTAAGGCCCTGTGCCCACCGCCAGGCCCACCC...CTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACGGCCTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGGGGGCAGGGTGGGCCTaGCGGTGGGCACAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: GGRGCDCETGVQEWGQGGGAGWA*RWAQGL
Trigger: AAGGCCCTGTGCCCACCGCCAGGCCCACCCTGCCCC...CCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCC
72% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GCCTCGGGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGGGCAGGGTGGGCCTaGCGGTGGGCACAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: ASGGRGCDCETGVQEWGQGAGWA*RWAQGL
Trigger: AAGGCCCTGTGCCCACCGCCAGGCCCACCCTGCCCC...CTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCCCGAGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp ATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGGGGCAGGGTGGGCCTaGCGGTGGGCACAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: MRESDSTRSGPTCRRPRPGAGWA*RWAQGL
Trigger: AAGGCCCTGTGCCCACCGCCAGGCCCACCCTGCCCC...CGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCAT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGCGGGGCAGGGTGGGCCTaGCGGTGGGCACAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: EDVAVTVRPASRSGGRVGGAGWA*RWAQGL
Trigger: AAGGCCCTGTGCCCACCGCCAGGCCCACCCTGCCCC...GCCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGCTGAGCCTGTCGCCCTaGGTCGGGGAGGCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: GGRGCDCETGVQEWGQGGLSLSP*VGEAVG
Trigger: CCCCACGGCCTCCCCGACCCAGGGCGACAGGCTCAG...CCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCCTGCGGGGCCAGCCCGGGATaGAAGCACGCCCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: ESDSTRSGPTCRRPRPACGASPG*KHALPP
Trigger: TGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCC...GCAGGCCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGCCATGGGGGCCAGCCCGGGATGGAAGCACGCCCTCCCACCACGGGCAGCTTGGGTCAGGGCCTGCGCTaGGCGCCCCATGGACACGTA +
Preference number: 4 (lower is better)
Translates to: GHGGQPGMEARPPTTGSLGQGLR*APHGHV
Trigger: TACGTGTCCATGGGGCGCCCAGCGCAGGCCCTGACC...CAAGCTGCCCGTGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCCCATGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp CCCACAGCCCAGCCCAGCCCAGCCCAGCCCAGCCCTCTGGCTGATGCCCTCTCGGGTCAGGGCCTGCGCTaGGCGCCCCATGGACACGTA +
Preference number: 4 (lower is better)
Translates to: PTAQPSPAQPSPLADALSGQGLR*APHGHV
Trigger: TACGTGTCCATGGGGCGCCCAGCGCAGGCCCTGACC...CGAGAGGGCATCAGCCAGAGGGCTGGGCTGGGCTGGGCTGGGCTGGGCTGTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp CCCACAGCCCAGCCCAGCCCAGCCCAGCCCAGCCCTCTGGCTGATGCCCTCTCGGCCGTGAGCTCCCCATaGCGGTCCCCGATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PTAQPSPAQPSPLADALSAVSSP*RSPISW
Trigger: CCAGGAGATCGGGGACCGCCATGGGGAGCTCACGGC...CGAGAGGGCATCAGCCAGAGGGCTGGGCTGGGCTGGGCTGGGCTGGGCTGTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp TGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCTGAGGCTGCCGGGCTaGTCAGGCGGCCGAGCACCA +
Preference number: 4 (lower is better)
Translates to: CGSLTAPGRGRHAEGPVRLRLPG*SGGRAP
Trigger: TGGTGCTCGGCCGCCTGACCAGCCCGGCAGCCTCAG...CCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp GGGAGGCCGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGTAGCGAGTCCCTGCTaGGCCCCCGCCAGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: GRPWGCMPSACPRQWPREVASPC*APASPL
Trigger: CAGGGGACTGGCGGGGGCCCAGCAGGGACTCGCTAC...CTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACGGCCTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR TCA 90 bp GGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACGGGCAGCTTGGCCTaGGCCTGTCGCCCTGGGTCG +
Preference number: 4 (lower is better)
Translates to: GKGLGERMRESDSTRSGPTGSLA*ACRPGS
Trigger: CGACCCAGGGCGACAGGCTCAGGCCAAGCTGCCCGT...CGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp CGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGACGTGGACGGGCAGCTTGGCCTaGGCCTGTCGCCCTGGGTCG +
Preference number: 4 (lower is better)
Translates to: RGAACPVPVLGNGLGRTWTGSLA*ACRPGS
Trigger: CGACCCAGGGCGACAGGCTCAGGCCAAGCTGCCCGT...CCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp GAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCCTGCGAGGATGCGGGAGTCTaGCAGCACCAGGTCGGGGCC +
Preference number: 4 (lower is better)
Translates to: ESDSTRSGPTCRRPRPACEDAGV*QHQVGA
Trigger: GGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTC...GCAGGCCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp CGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGACGTGGGGCCGTGGGGCTGCATaGCCAGTGCCTGTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: RGAACPVPVLGNGLGRTWGRGAA*PVPVLG
Trigger: GCCGAGGACAGGCACTGGGCATGCAGCCCCACGGCC...CCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp ACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCAGGTCGGGGCCGACATaGCGAAGGCCCCGTCCGGCC +
Preference number: 4 (lower is better)
Translates to: TGRAWGRGCGSLTAPGRGRSGPT*RRPRPA
Trigger: GGCCGGACGGGGCCTTCGGCATGTCGGCCCCGACCT...GCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp AGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCAGGTCGGGGCCGACATaGCGAAGGCCCCGTCCGGCC +
Preference number: 4 (lower is better)
Translates to: RGCGSLTAPGRGRHAEGPRSGPT*RRPRPA
Trigger: GGCCGGACGGGGCCTTCGGCATGTCGGCCCCGACCT...GGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp GCCTCGGGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGTCCTGTCGAGGCCCCTaGAGGGCCCTGGGACTCGGC +
Preference number: 4 (lower is better)
Translates to: ASGGRGCDCETGVQEWGQSCRGP*RALGLG
Trigger: GCCGAGTCCCAGGGCCCTGCAGGGGCCTCGACAGGA...CTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCCCGAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp GAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCCTGCAGGTGCCCGGGGTCCTaGGTGGCGTTTGCGGCGTTC +
Preference number: 4 (lower is better)
Translates to: ESDSTRSGPTCRRPRPACRCPGS*VAFAAF
Trigger: GAACGCCGCAAACGCCACGCAGGACCCCGGGCACCT...GCAGGCCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp GGGAGGCCGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGAGGTGCCCGGGGTCCTaGGTGGCGTTTGCGGCGTTC +
Preference number: 4 (lower is better)
Translates to: GRPWGCMPSACPRQWPRERCPGS*VAFAAF
Trigger: GAACGCCGCAAACGCCACGCAGGACCCCGGGCACCT...CTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACGGCCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp GTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCTGTGGGGGTTGCCGTAGGCCCTaGCCTGCGCCGCACGGTCGC +
Preference number: 4 (lower is better)
Translates to: VGPRGTLLDGTASPGGCGGCRRP*PAPHGR
Trigger: GCGACCGTGCGGCGCAGGGCAGGGCCTACGGCAACC...CCCACAGCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp GAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCCTGCGGGTGTTGCCCAGGTTaGCGTAGGCCCTGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: ESDSTRSGPTCRRPRPACGCCPG*RRPCPA
Trigger: CGCAGGGCAGGGCCTACGGCAACCTGGGCAACACCC...GCAGGCCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp GGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGGCGAAGGTCAGGGCCTaGGCTGGGCGCCCCATGGAC +
Preference number: 4 (lower is better)
Translates to: GKGLGERMRESDSTRSGPAKVRA*AGRPMD
Trigger: GTCCATGGGGCGCCCAGCGCAGGCCCTGACCTTCGC...CGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp GGCCATGGGGGCCAGCCCGGGATGGAAGCACGCCCTCCCACCACGGGCAGCTTGAGCACCAGCTGCAGCTaGGCCACGTTCATGCGGGCC +
Preference number: 4 (lower is better)
Translates to: GHGGQPGMEARPPTTGSLSTSCS*ATFMRA
Trigger: GGCCCGCATGAACGTGGCGCAGCTGCAGCTGGTGCT...CAAGCTGCCCGTGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCCCATGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp TGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGACGTGGCTCCAGCGGGGAGTGGCTaGCCTCCCGGGGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: WGCMPSACPRQWPREDVAPAGSG*PPGASS
Trigger: AGAGGAGGCCCCGGGAGGGCAGCCACTCCCCGCTGG...AGCCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp GAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCCTGCTCGGCACCCGCCGACTaGCCCGGACTTCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: ESDSTRSGPTCRRPRPACSAPAD*PGLLPS
Trigger: AGAGGGGAGAAGTCCGGGGCAGTCGGCGGGTGCCGA...GCAGGCCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392944.5
CDS-3UTR GCA 90 bp GGCCATGGGGGCCAGCCCGGGATGGAAGCACGCCCTCCCACCACGGGCAGCTTGGGGCCCTCGGGATGCTaGGGATCACAGGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: GHGGQPGMEARPPTTGSLGPSGC*GSQAVS
Trigger: GGAGACAGCCTGTGATCCGCAGCATCCCGAGGGCCC...CAAGCTGCCCGTGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCCCATGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429455.5
CDS-3UTR GCA 90 bp CTCCCACAGCCCAGCCCAGCCCAGCCCAGCCCAGCCCTCTGGCTGATGCCCTCTCTGCCACCTCCGCCATaGTGGCCTGGCCTCGATCCC +
Preference number: 4 (lower is better)
Translates to: LPQPSPAQPSPALWLMPSLPPPP*WPGLDP
Trigger: GGGATCGAGGCCAGGCCAGCATGGCGGAGGTGGCAG...AGAGGGCATCAGCCAGAGGGCTGGGCTGGGCTGGGCTGGGCTGGGCTGTGGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp GGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCTCCTGTCCTCCAGGGTaGGGGCGGCCGTGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: GLGERMRESDSTRSGPTCSCPPG*GRPWPR
Trigger: CCGAGGCCACGGCCGCCCCCACCCTGGAGGACAGGA...GCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGGAGGCCGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGTCCAGCCGGCGGCTCTaGGAGCTGGCGATGAGGTCG +
Preference number: 4 (lower is better)
Translates to: GRPWGCMPSACPRQWPRESSRRL*ELAMRS
Trigger: CGACCTCATCGCCAGCTCCCAGAGCCGCCGGCTGGA...CTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACGGCCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCTGTGGGGCAGGCTGCCCACGCTaGCCCGCTGGTCGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: VGPRGTLLDGTASPGGCGAGCPR*PAGRPA
Trigger: GGCTGGACGACCAGCGGGCCAGCGTGGGCAGCCTGC...CCCACAGCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp CGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGACGTGGGGGTGGGCCTGGCGGTaGGCACAGGGCCTTAGCTCG +
Preference number: 4 (lower is better)
Translates to: RGAACPVPVLGNGLGRTWGWAWR*AQGLSS
Trigger: CGAGCTAAGGCCCTGTGCCCACCGCCAGGCCCACCC...CCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCTGTGGGGGGTCGGGGAGGCCGTaGGGCTGCATGCCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: VGPRGTLLDGTASPGGCGGSGRP*GCMPSA
Trigger: GGCACTGGGCATGCAGCCCCACGGCCTCCCCGACCC...CCCACAGCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCAC
71% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp TGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGACGTGGCTGGGTCGGGGAGGCCGTaGGGCTGCATGCCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: WGCMPSACPRQWPREDVAGSGRP*GCMPSA
Trigger: GGCACTGGGCATGCAGCCCCACGGCCTCCCCGACCC...AGCCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCTGAGCCTGTCGCCCTaGGTCGGGGAGGCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: GLGERMRESDSTRSGPTCLSLSP*VGEAVG
Trigger: CCCCACGGCCTCCCCGACCCAGGGCGACAGGCTCAG...GCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGGGGGCCAGCCCGGGATaGAAGCACGCCCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: GGRGCDCETGVQEWGQGGGASPG*KHALPP
Trigger: TGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCC...CCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCC
71% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp TGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCCTCTGGCCGGGGAGTaGGGAGACAGGCTTGGAGGG +
Preference number: 4 (lower is better)
Translates to: CGSLTAPGRGRHAEGPVRPLAGE*GDRLGG
Trigger: CCCTCCAAGCCTGTCTCCCCACTCCCCGGCCAGAGG...CCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GCCTCGGGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGCCCGGGGTCCTGCGTaGCGTTTGCGGCGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: ASGGRGCDCETGVQEWGQARGPA*RLRRSR
Trigger: CCTGGAACGCCGCAAACGCCACGCAGGACCCCGGGC...CTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCCCGAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp GGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGGCCCGGGGTCCTGCGTaGCGTTTGCGGCGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GGRGCDCETGVQEWGQGGARGPA*RLRRSR
Trigger: CCTGGAACGCCGCAAACGCCACGCAGGACCCCGGGC...CCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp GGCCATGGGGGCCAGCCCGGGATGGAAGCACGCCCTCCCACCACGGGCAGCTTGCTGTCGGCCAGCTCCTaGGCAATGAGCAGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: GHGGQPGMEARPPTTGSLLSASS*AMSRCR
Trigger: GCGGCACCTGCTCATTGCCCAGGAGCTGGCCGACAG...CAAGCTGCCCGTGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCCCATGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR TCA 90 bp AGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCACGGGCAGCTTGGCCTaGGCCTGTCGCCCTGGGTCG +
Preference number: 4 (lower is better)
Translates to: RGCGSLTAPGRGRHAEGPTGSLA*ACRPGS
Trigger: CGACCCAGGGCGACAGGCTCAGGCCAAGCTGCCCGT...GGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp GGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCACGGGCAGCTTGGCCTaGGCCTGTCGCCCTGGGTCG +
Preference number: 4 (lower is better)
Translates to: GLGERMRESDSTRSGPTCTGSLA*ACRPGS
Trigger: CGACCCAGGGCGACAGGCTCAGGCCAAGCTGCCCGT...GCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp CGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGACGTGGGAGGATGCGGGAGTCTaGCAGCACCAGGTCGGGGCC +
Preference number: 4 (lower is better)
Translates to: RGAACPVPVLGNGLGRTWEDAGV*QHQVGA
Trigger: GGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTC...CCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp GGGAGGCCGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGCCTTCTGTGGTTGCTaGCCTCTGGCCGGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GRPWGCMPSACPRQWPREAFCGC*PLAGEW
Trigger: CCACTCCCCGGCCAGAGGTCAGCAACCACAGAAGGC...CTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACGGCCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp CCCCAGGCACATAGGGCTCCCACAGCCCAGCCCAGCCCAGCCCAGCCCAGCCCTAGGCCACGCCTGTCTTaGAGTCGCCCGCCTTGCACA +
Preference number: 4 (lower is better)
Translates to: PQAHRAPTAQPSPAQPSPRPRLS*SRPPCT
Trigger: TGTGCAAGGCGGGCGACTTCAAGACAGGCGTGGCCT...AGGGCTGGGCTGGGCTGGGCTGGGCTGGGCTGTGGGAGCCCTATGTGCCTGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR TCA 90 bp TGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCCAGCTCCTGGGCAATaGGCAGGTGCCGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: CGSLTAPGRGRHAEGPVRPAPGQ*AGAAGG
Trigger: ACCACCTGCGGCACCTGCTCATTGCCCAGGAGCTGG...CCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR TCA 90 bp CCCACAGCCCAGCCCAGCCCAGCCCAGCCCAGCCCTCTGGCTGATGCCCTCTCGCCAGCGGTCCATGAATaGGGTCACCACGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PTAQPSPAQPSPLADALSPAVHE*GHHGGL
Trigger: GAGGCCACCGTGGTGACCTCATTCATGGACCGCTGG...CGAGAGGGCATCAGCCAGAGGGCTGGGCTGGGCTGGGCTGGGCTGGGCTGTGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR GCA 90 bp AGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCACGGGGCCCTCGGGATaGTCTGGGGAGGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: RGCGSLTAPGRGRHAEGPTGPSG*SGEGVG
Trigger: CCCCACTCCCTCCCCAGAGCATCCCGAGGGCCCCGT...GGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000291775.3
CDS-3UTR GCA 90 bp CTGAGAGTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCGCACCAGGCTGGCACTaGTGCTGGGGCTCGGGCGGG +
Preference number: 4 (lower is better)
Translates to: LRVGPRGTLLDGTASPGGAPGWH*CWGSGG
Trigger: CCCGCCCGAGCCCCAGCAGCAGTGCCAGCCTGGTGC...GCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCACTCTCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp GGCCATGGGGGCCAGCCCGGGATGGAAGCACGCCCTCCCACCACGGGCAGCTTGCCTCCTAGATGGAACTaGCAGCCCTGGGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GHGGQPGMEARPPTTGSLPPRWN*QPWGLW
Trigger: CCACAGCCCCCAGGGCTGGCAGTTCCATCTAGGAGG...CAAGCTGCCCGTGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCCCATGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp GTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCTGTGGGTCGGGCACCTGTCCCTaGTCTCGGGTGCGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: VGPRGTLLDGTASPGGCGSGTCP*SRVRPC
Trigger: GCAGGGCCGCACCCGAGAGCAGGGACAGGTGCCCGA...CCCACAGCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp CGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGACGTGGCCTTGGCCTCCCCCATaGGGTCACCGATGGTCCGCG +
Preference number: 4 (lower is better)
Translates to: RGAACPVPVLGNGLGRTWPWPPP*GHRWSA
Trigger: CGCGGACCATCGGTGACCGCATGGGGGAGGCCAAGG...CCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp GGGGCCATGGTAGGGCCCTTGGCAGTCTTGGGAGGTGCCAAGGCTGGGTCTGGAGGTTGCCGTAGGCCCTaGCCTGCGCCGCACGGTCGC +
Preference number: 4 (lower is better)
Translates to: GAMVGPLAVLGGAKAGSGGCRRP*PAPHGR
Trigger: GCGACCGTGCGGCGCAGGGCAGGGCCTACGGCAACC...TCCAGACCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCCCTACCATGGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp AACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGGGGGTAGCGAGTCCCTaGTGGGCCCCCGCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: NGKGLGERMRESDSTRSGGVASP*WAPASP
Trigger: GGGACTGGCGGGGGCCCAGCAGGGACTCGCTACCCC...CCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTT
70% GC, longest homopolymer 8 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp CGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGACGTGGCCTCTGTCCGTCACCTaGCCTGGGCCAGCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: RGAACPVPVLGNGLGRTWPLSVT*PGPASP
Trigger: TGGGGAGGCTGGCCCAGGGCAGGTGACGGACAGAGG...CCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392944.5
CDS-3UTR CCA 90 bp GGCCATGGGGGCCAGCCCGGGATGGAAGCACGCCCTCCCACCACGGGCAGCTTGTCCAGGGGACAACGCTaGTCGTCCATGCGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GHGGQPGMEARPPTTGSLSRGQR*SSMRLL
Trigger: GAGCAGCCGCATGGACGACCAGCGTTGTCCCCTGGA...CAAGCTGCCCGTGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCCCATGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp CGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGACGTGGTCGGCAGCCCCGGCCTaGCCATCGTCCAGGGGACAA +
Preference number: 4 (lower is better)
Translates to: RGAACPVPVLGNGLGRTWSAAPA*PSSRGQ
Trigger: TTGTCCCCTGGACGATGGCCAGGCCGGGGCTGCCGA...CCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGTCGGCAGCCCCGGCCTaGCCATCGTCCAGGGGACAA +
Preference number: 4 (lower is better)
Translates to: GGRGCDCETGVQEWGQGGSAAPA*PSSRGQ
Trigger: TTGTCCCCTGGACGATGGCCAGGCCGGGGCTGCCGA...CCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGCTCGGCAGCCCCGGCCTaGCCATCGTCCAGGGGACAA +
Preference number: 4 (lower is better)
Translates to: EDVAVTVRPASRSGGRVGSAAPA*PSSRGQ
Trigger: TTGTCCCCTGGACGATGGCCAGGCCGGGGCTGCCGA...GCCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp ATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGTCGGCAGCCCCGGCCTaGCCATCGTCCAGGGGACAA +
Preference number: 4 (lower is better)
Translates to: MRESDSTRSGPTCRRPRPSAAPA*PSSRGQ
Trigger: TTGTCCCCTGGACGATGGCCAGGCCGGGGCTGCCGA...CGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GCCTCGGGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGTCCAGCCGGCGGCTCTaGGAGCTGGCGATGAGGTCG +
Preference number: 4 (lower is better)
Translates to: ASGGRGCDCETGVQEWGQSSRRL*ELAMRS
Trigger: CGACCTCATCGCCAGCTCCCAGAGCCGCCGGCTGGA...CTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCCCGAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp ATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGTCCAGCCGGCGGCTCTaGGAGCTGGCGATGAGGTCG +
Preference number: 4 (lower is better)
Translates to: MRESDSTRSGPTCRRPRPSSRRL*ELAMRS
Trigger: CGACCTCATCGCCAGCTCCCAGAGCCGCCGGCTGGA...CGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCCTGCGGTGGCGGGCAGCGCTaGTCATCGATCCTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: ESDSTRSGPTCRRPRPACGGGQR*SSILED
Trigger: GTCCTCCAGGATCGATGACCAGCGCTGCCCGCCACC...GCAGGCCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGGAGGCCGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGCCTGTCCTCGGCAATaGCCTCGGGAGGACGTGGCT +
Preference number: 4 (lower is better)
Translates to: GRPWGCMPSACPRQWPREACPRQ*PREDVA
Trigger: AGCCACGTCCTCCCGAGGCCATTGCCGAGGACAGGC...CTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACGGCCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp ACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCGGGGCCAGCCCGGGATaGAAGCACGCCCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: TGRAWGRGCGSLTAPGRGGASPG*KHALPP
Trigger: TGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCC...GCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp AGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGGGGCCAGCCCGGGATaGAAGCACGCCCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: RGCGSLTAPGRGRHAEGPGASPG*KHALPP
Trigger: TGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCC...GGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGGAGGCCGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGTGGCCCTGTCCTTGGTaGCCCCAAGAGGCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GRPWGCMPSACPRQWPREWPCPW*PQEAAQ
Trigger: CTGAGCCGCCTCTTGGGGCCACCAAGGACAGGGCCA...CTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACGGCCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp CGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGACGTGGCCTCTGGCCGGGGAGTaGGGAGACAGGCTTGGAGGG +
Preference number: 4 (lower is better)
Translates to: RGAACPVPVLGNGLGRTWPLAGE*GDRLGG
Trigger: CCCTCCAAGCCTGTCTCCCCACTCCCCGGCCAGAGG...CCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GCCTCGGGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGCCTCTGGCCGGGGAGTaGGGAGACAGGCTTGGAGGG +
Preference number: 4 (lower is better)
Translates to: ASGGRGCDCETGVQEWGQPLAGE*GDRLGG
Trigger: CCCTCCAAGCCTGTCTCCCCACTCCCCGGCCAGAGG...CTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCCCGAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGCCATGGGGGCCAGCCCGGGATGGAAGCACGCCCTCCCACCACGGGCAGCTTGCTGCCATGCGTGGTCTaGGGGGCCTTCTGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: GHGGQPGMEARPPTTGSLLPCVV*GAFCGC
Trigger: GCAACCACAGAAGGCCCCCCAGACCACGCATGGCAG...CAAGCTGCCCGTGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCCCATGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp TGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGTGGAACTGCCAGCCCTaGGGGCTGTGGGGCCATGGT +
Preference number: 4 (lower is better)
Translates to: CGSLTAPGRGRHAEGPVRWNCQP*GLWGHG
Trigger: ACCATGGCCCCACAGCCCCCAGGGCTGGCAGTTCCA...CCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCCTGCTGGAACTGCCAGCCCTaGGGGCTGTGGGGCCATGGT +
Preference number: 4 (lower is better)
Translates to: ESDSTRSGPTCRRPRPACWNCQP*GLWGHG
Trigger: ACCATGGCCCCACAGCCCCCAGGGCTGGCAGTTCCA...GCAGGCCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGCCATGGGGGCCAGCCCGGGATGGAAGCACGCCCTCCCACCACGGGCAGCTTGATGCTCAGATGCCGCTaGCAGCAGACGGCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: GHGGQPGMEARPPTTGSLMLRCR*QQTAAS
Trigger: CGAGGCTGCCGTCTGCTGCCAGCGGCATCTGAGCAT...CAAGCTGCCCGTGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCCCATGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp CCCCAGGCACATAGGGCTCCCACAGCCCAGCCCAGCCCAGCCCAGCCCAGCCCTATGCTCAGATGCCGCTaGCAGCAGACGGCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: PQAHRAPTAQPSPAQPSPMLRCR*QQTAAS
Trigger: CGAGGCTGCCGTCTGCTGCCAGCGGCATCTGAGCAT...AGGGCTGGGCTGGGCTGGGCTGGGCTGGGCTGTGGGAGCCCTATGTGCCTGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp GGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGGCCGTGAGCTCCCCATaGCGGTCCCCGATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GKGLGERMRESDSTRSGPAVSSP*RSPISW
Trigger: CCAGGAGATCGGGGACCGCCATGGGGAGCTCACGGC...CGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp AACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCTGTCCAGCGGGGAGTaGCTGCCCTCCCGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: NGKGLGERMRESDSTRSGLSSGE*LPSRGL
Trigger: GAGGCCCCGGGAGGGCAGCCACTCCCCGCTGGACAG...CCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR TCA 90 bp GGCCATGGGGGCCAGCCCGGGATGGAAGCACGCCCTCCCACCACGGGCAGCTTGCTCTCCATCCTAGCCTaGGAGTGGGGCCTAGAGGCA +
Preference number: 4 (lower is better)
Translates to: GHGGQPGMEARPPTTGSLLSILA*EWGLEA
Trigger: TGCCTCTAGGCCCCACTCTCAGGCTAGGATGGAGAG...CAAGCTGCCCGTGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCCCATGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp GGGAGGCCGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGAGGCCACGCCTGTCTTaGAGTCGCCCGCCTTGCACA +
Preference number: 4 (lower is better)
Translates to: GRPWGCMPSACPRQWPRERPRLS*SRPPCT
Trigger: TGTGCAAGGCGGGCGACTTCAAGACAGGCGTGGCCT...CTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACGGCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR TCA 90 bp ATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGCCAGCTCCTGGGCAATaGGCAGGTGCCGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: MRESDSTRSGPTCRRPRPPAPGQ*AGAAGG
Trigger: ACCACCTGCGGCACCTGCTCATTGCCCAGGAGCTGG...CGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR TCA 90 bp GGGAGGCCGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGCCCCCGCCAGTCCCCTaGATGGTGGCTGTCTCCATT +
Preference number: 4 (lower is better)
Translates to: GRPWGCMPSACPRQWPREPPPVP*MVAVSI
Trigger: AATGGAGACAGCCACCATTCAGGGGACTGGCGGGGG...CTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACGGCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR TCA 90 bp TGGGGCAACAGGCGACCACCTCCTGTCCTTCATCCAGCAGCCCTGCAGCGCCACGCCCAGCCCTCTGGCTaGTGCCCTCTCGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: WGNRRPPPVLHPAALQRHAQPSG*CPLASQ
Trigger: CTGGGAGGCGAGAGGGCATCAGCCAGAGGGCTGGGC...GTGGCGCTGCAGGGCTGCTGGATGAAGGACAGGAGGTGGTCGCCTGTTGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR GCA 90 bp GCCTCGGGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGACGAGACCGGGGGCTaGTTGCCCAGGCCACACACA +
Preference number: 4 (lower is better)
Translates to: ASGGRGCDCETGVQEWGQDETGG*LPRPHT
Trigger: TGTGTGTGGCCTGGGCAAGCAGCCCCCGGTCTCGTC...CTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCCCGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291775.3
CDS-3UTR GCA 90 bp GCCTCGGGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGCGAGGTCCACCCGCTaGTCGTCCATGCGCTTAGCC +
Preference number: 4 (lower is better)
Translates to: ASGGRGCDCETGVQEWGQARSTR*SSMRLA
Trigger: GGCTAAGCGCATGGACGAGCAGCGGGTGGACCTCGC...CTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCCCGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp GGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGGCGAGGTCCACCCGCTaGTCGTCCATGCGCTTAGCC +
Preference number: 4 (lower is better)
Translates to: GGRGCDCETGVQEWGQGGARSTR*SSMRLA
Trigger: GGCTAAGCGCATGGACGAGCAGCGGGTGGACCTCGC...CCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp AACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGGGCCGTGGGGCTGCATaGCCAGTGCCTGTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: NGKGLGERMRESDSTRSGGRGAA*PVPVLG
Trigger: GCCGAGGACAGGCACTGGGCATGCAGCCCCACGGCC...CCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTT
69% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp GCCTCGGGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGCTTGGAGGGAGCCCTaGCCCAGGACGAAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: ASGGRGCDCETGVQEWGQAWREP*PRTKLE
Trigger: CTCCAGCTTCGTCCTGGGGCAGGGCTCCCTCCAAGC...CTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCCCGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp GGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGGCTTGGAGGGAGCCCTaGCCCAGGACGAAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GGRGCDCETGVQEWGQGGAWREP*PRTKLE
Trigger: CTCCAGCTTCGTCCTGGGGCAGGGCTCCCTCCAAGC...CCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp CGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGACGTGGGCTTGGAGGGAGCCCTaGCCCAGGACGAAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RGAACPVPVLGNGLGRTWAWREP*PRTKLE
Trigger: CTCCAGCTTCGTCCTGGGGCAGGGCTCCCTCCAAGC...CCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp CTGAGAGTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCTCCTGTCGAGGCCCCTaGAGGGCCCTGGGACTCGGC +
Preference number: 4 (lower is better)
Translates to: LRVGPRGTLLDGTASPGGSCRGP*RALGLG
Trigger: GCCGAGTCCCAGGGCCCTGCAGGGGCCTCGACAGGA...GCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCACTCTCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp GAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGCGGGCGTTCCCCAGGTTaGTGTAGGCCCTCCTCTCGG +
Preference number: 4 (lower is better)
Translates to: EDVAVTVRPASRSGGRVGGRSPG*CRPSSR
Trigger: CCGAGAGGAGGGCCTACAGCAACCTGGGGAACGCCC...GCCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp TGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGGCCTGGTCCCTGAGCTaGCGAGACAGTTGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: CGSLTAPGRGRHAEGPVRAWSLS*RDSCSV
Trigger: GACGCTGCAACTGTCTCGGCAGCTCAGGGACCAGGC...CCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp GGGAGGCCGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGTGGGCAATGAGCAGGTaGCGCAGGTGGTACTCGGCC +
Preference number: 4 (lower is better)
Translates to: GRPWGCMPSACPRQWPREWAMSR*RRWYSA
Trigger: GGCCGAGTACCACCTGCGGCACCTGCTCATTGCCCA...CTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACGGCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp GAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCCTGCTGGGCAATGAGCAGGTaGCGCAGGTGGTACTCGGCC +
Preference number: 4 (lower is better)
Translates to: ESDSTRSGPTCRRPRPACWAMSR*RRWYSA
Trigger: GGCCGAGTACCACCTGCGGCACCTGCTCATTGCCCA...GCAGGCCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp GGGGCCATGGTAGGGCCCTTGGCAGTCTTGGGAGGTGCCAAGGCTGGGTCTGGAGCGAAGGTCAGGGCCTaGGCTGGGCGCCCCATGGAC +
Preference number: 4 (lower is better)
Translates to: GAMVGPLAVLGGAKAGSGAKVRA*AGRPMD
Trigger: GTCCATGGGGCGCCCAGCGCAGGCCCTGACCTTCGC...TCCAGACCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCCCTACCATGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp GGTCACCACGGTGGCCTCGCATGGCCTTGGGCCTTGCCTGATTACTGCCCCAGGGCGAAGGTCAGGGCCTaGGCTGGGCGCCCCATGGAC +
Preference number: 4 (lower is better)
Translates to: GHHGGLAWPWALPDYCPRAKVRA*AGRPMD
Trigger: GTCCATGGGGCGCCCAGCGCAGGCCCTGACCTTCGC...CCTGGGGCAGTAATCAGGCAAGGCCCAAGGCCATGCGAGGCCACCGTGGTGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR GCA 90 bp AACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCTCGTGCGTGGCACGTaGACCCGGACGTCGGCGCTG +
Preference number: 4 (lower is better)
Translates to: NGKGLGERMRESDSTRSGLVRGT*TRTSAL
Trigger: CAGCGCCGACGTCCGGGTGCACGTGCCACGCACGAG...CCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp ACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCCGGGAAGCCTCCCGTaGCTCCTGTCCCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: TGRAWGRGCGSLTAPGRGPGSLP*LLSLCP
Trigger: TGGGCACAGGGACAGGAGGCACGGGAGGCTTCCCGG...GCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392944.5
CDS-3UTR CCA 90 bp GCCTCGGGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGCTCTGGGGAGGGAGTaGGGTCACCGCAGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: ASGGRGCDCETGVQEWGQALGRE*GHRSQS
Trigger: GCTTTGGCTGCGGTGACCCCACTCCCTCCCCAGAGC...CTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCCCGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291775.3
CDS-3UTR CCA 90 bp ACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCGCCCTCGGGATGCTCTaGGGAGGGAGTGGGGTCACC +
Preference number: 4 (lower is better)
Translates to: TGRAWGRGCGSLTAPGRGALGML*GGSGVT
Trigger: GGTGACCCCACTCCCTCCCCAGAGCATCCCGAGGGC...GCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291775.3
CDS-3UTR CCA 90 bp GAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCCTGCTCCAGGGGACAACGCTaGTCGTCCATGCGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: ESDSTRSGPTCRRPRPACSRGQR*SSMRLL
Trigger: GAGCAGCCGCATGGACGACCAGCGTTGTCCCCTGGA...GCAGGCCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp TGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGACGTGGCTTCCAGCCGGCGGCTCTaGGAGCTGGCGATGAGGTCG +
Preference number: 4 (lower is better)
Translates to: WGCMPSACPRQWPREDVASSRRL*ELAMRS
Trigger: CGACCTCATCGCCAGCTCCCAGAGCCGCCGGCTGGA...AGCCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp AGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCTCCAGCCGGCGGCTCTaGGAGCTGGCGATGAGGTCG +
Preference number: 4 (lower is better)
Translates to: RGCGSLTAPGRGRHAEGPSSRRL*ELAMRS
Trigger: CGACCTCATCGCCAGCTCCCAGAGCCGCCGGCTGGA...GGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCCTGCTGCCCTGCATTGCTGTaGGTGATTCGCAGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: ESDSTRSGPTCRRPRPACCPALL*VIRSPG
Trigger: GCCGGGGCTGCGAATCACCCACAGCAATGCAGGGCA...GCAGGCCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp ATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGGTGGCGGGCAGCGCTaGTCATCGATCCTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: MRESDSTRSGPTCRRPRPGGGQR*SSILED
Trigger: GTCCTCCAGGATCGATGACCAGCGCTGCCCGCCACC...CGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGGGTGGCGGGCAGCGCTaGTCATCGATCCTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: GKGLGERMRESDSTRSGPGGGQR*SSILED
Trigger: GTCCTCCAGGATCGATGACCAGCGCTGCCCGCCACC...CGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GCCTCGGGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGGCAGTACGTCAGGTaGCGGGCAGCGCTGGTCATC +
Preference number: 4 (lower is better)
Translates to: ASGGRGCDCETGVQEWGQGQYVR*RAALVI
Trigger: GATGACCAGCGCTGCCCGCCACCTGACGTACTGCCC...CTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCCCGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGGGGCAGTACGTCAGGTaGCGGGCAGCGCTGGTCATC +
Preference number: 4 (lower is better)
Translates to: GKGLGERMRESDSTRSGPGQYVR*RAALVI
Trigger: GATGACCAGCGCTGCCCGCCACCTGACGTACTGCCC...CGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGCGCCTGTCCTCGGCAATaGCCTCGGGAGGACGTGGCT +
Preference number: 4 (lower is better)
Translates to: EDVAVTVRPASRSGGRVGACPRQ*PREDVA
Trigger: AGCCACGTCCTCCCGAGGCCATTGCCGAGGACAGGC...GCCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp CCCAAGAGGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTCTGAGCCTGTCGCCCTaGGTCGGGGAGGCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: PKRRLRDTFGEGGGDSRVLSLSP*VGEAVG
Trigger: CCCCACGGCCTCCCCGACCCAGGGCGACAGGCTCAG...AACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCCTCTTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGCCATGGGGGCCAGCCCGGGATGGAAGCACGCCCTCCCACCACGGGCAGCTTGGCTCAGAGACACCTTTaGGGAGGGTGGGGGAGACAG +
Preference number: 4 (lower is better)
Translates to: GHGGQPGMEARPPTTGSLAQRHL*GGWGRQ
Trigger: CTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGC...CAAGCTGCCCGTGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCCCATGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGGAGGCCGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGACATGGCCCTGTCCTTaGTGGCCCCAAGAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: GRPWGCMPSACPRQWPRETWPCP*WPQEAA
Trigger: AGCCGCCTCTTGGGGCCACCAAGGACAGGGCCATGT...CTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACGGCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGGAGGCCGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGTGGTTGCTGACCTCTaGCCGGGGAGTGGGGAGACA +
Preference number: 4 (lower is better)
Translates to: GRPWGCMPSACPRQWPREVVADL*PGSGET
Trigger: TGTCTCCCCACTCCCCGGCCAGAGGTCAGCAACCAC...CTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACGGCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp TGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCTGCCATGCGTGGTCTaGGGGGCCTTCTGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: CGSLTAPGRGRHAEGPVRLPCVV*GAFCGC
Trigger: GCAACCACAGAAGGCCCCCCAGACCACGCATGGCAG...CCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGGCAACCTCAGGCCCCTaGGGCCCATCTCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GKGLGERMRESDSTRSGPATSGP*GPSQAP
Trigger: TGGAGCCTGAGATGGGCCCCAGGGGCCTGAGGTTGC...CGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGGCAACCTCAGGCCCCTaGGGCCCATCTCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GGRGCDCETGVQEWGQGGATSGP*GPSQAP
Trigger: TGGAGCCTGAGATGGGCCCCAGGGGCCTGAGGTTGC...CCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGCGCAACCTCAGGCCCCTaGGGCCCATCTCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: EDVAVTVRPASRSGGRVGATSGP*GPSQAP
Trigger: TGGAGCCTGAGATGGGCCCCAGGGGCCTGAGGTTGC...GCCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp TGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGGGCCCTTGGCAGTCTTaGGAGGTGCCAAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: CGSLTAPGRGRHAEGPVRGPWQS*EVPRLG
Trigger: ACCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCC...CCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCCTGCGGCCCTTGGCAGTCTTaGGAGGTGCCAAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: ESDSTRSGPTCRRPRPACGPWQS*EVPRLG
Trigger: ACCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCC...GCAGGCCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp ATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGGGGGCGCTACGTCCTaGAGACCCTGTGTTCGGGCA +
Preference number: 4 (lower is better)
Translates to: MRESDSTRSGPTCRRPRPGGATS*RPCVRA
Trigger: TGCCCGAACACAGGGTCTCCAGGACGTAGCGCCCCC...CGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCAT
69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGCCATGGGGGCCAGCCCGGGATGGAAGCACGCCCTCCCACCACGGGCAGCTTGAGGAGGTCATGCTTGTaGTATTCCAGCGCCCGGCCG +
Preference number: 4 (lower is better)
Translates to: GHGGQPGMEARPPTTGSLRRSCL*YSSARP
Trigger: CGGCCGGGCGCTGGAATACCACAAGCATGACCTCCT...CAAGCTGCCCGTGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCCCATGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp TGGGGCAACAGGCGACCACCTCCTGTCCTTCATCCAGCAGCCCTGCAGCGCCACGCCCGGGGTCCTGCGTaGCGTTTGCGGCGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: WGNRRPPPVLHPAALQRHARGPA*RLRRSR
Trigger: CCTGGAACGCCGCAAACGCCACGCAGGACCCCGGGC...GTGGCGCTGCAGGGCTGCTGGATGAAGGACAGGAGGTGGTCGCCTGTTGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp TGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGGCCAGGCGCTCCTTGTaGAAGGTCGTGGCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: CGSLTAPGRGRHAEGPVRARRSL*KVVASV
Trigger: CACAGAGGCCACGACCTTCCACAAGGAGCGCCTGGC...CCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp CTGAGAGTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCAGCAGGTGCCGCAGGTaGTACTCGGCCGCGCGCTCG +
Preference number: 4 (lower is better)
Translates to: LRVGPRGTLLDGTASPGGSRCRR*YSAARS
Trigger: CGAGCGCGCGGCCGAGTACCACCTGCGGCACCTGCT...GCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCACTCTCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp GGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGCTGTCGGCCAGCTCCTaGGCAATGAGCAGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: GKGLGERMRESDSTRSGPLSASS*AMSRCR
Trigger: GCGGCACCTGCTCATTGCCCAGGAGCTGGCCGACAG...CGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp GGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCGGTCAGGGCCTGCGCTaGGCGCCCCATGGACACGTA +
Preference number: 4 (lower is better)
Translates to: GLGERMRESDSTRSGPTCGQGLR*APHGHV
Trigger: TACGTGTCCATGGGGCGCCCAGCGCAGGCCCTGACC...GCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp CCCCAGGCACATAGGGCTCCCACAGCCCAGCCCAGCCCAGCCCAGCCCAGCCCTTCTGCAGGTGCTTCTTaGCGAAGGTCAGGGCCTGCG +
Preference number: 4 (lower is better)
Translates to: PQAHRAPTAQPSPAQPSPSAGAS*RRSGPA
Trigger: CGCAGGCCCTGACCTTCGCCAAGAAGCACCTGCAGA...AGGGCTGGGCTGGGCTGGGCTGGGCTGGGCTGTGGGAGCCCTATGTGCCTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp ACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCGCCGTGAGCTCCCCATaGCGGTCCCCGATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: TGRAWGRGCGSLTAPGRGAVSSP*RSPISW
Trigger: CCAGGAGATCGGGGACCGCCATGGGGAGCTCACGGC...GCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp GGGGCCATGGTAGGGCCCTTGGCAGTCTTGGGAGGTGCCAAGGCTGGGTCTGGACTGAGGCTGCCGGGCTaGTCAGGCGGCCGAGCACCA +
Preference number: 4 (lower is better)
Translates to: GAMVGPLAVLGGAKAGSGLRLPG*SGGRAP
Trigger: TGGTGCTCGGCCGCCTGACCAGCCCGGCAGCCTCAG...TCCAGACCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCCCTACCATGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp CCTGTCCTTCATCCAGCAGCCCTGCAGCGCCACTCAGGATGCGGGTGGGAAGGGCTGAGGCTGCCGGGCTaGTCAGGCGGCCGAGCACCA +
Preference number: 4 (lower is better)
Translates to: PVLHPAALQRHSGCGWEGLRLPG*SGGRAP
Trigger: TGGTGCTCGGCCGCCTGACCAGCCCGGCAGCCTCAG...CCCTTCCCACCCGCATCCTGAGTGGCGCTGCAGGGCTGCTGGATGAAGGACAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp GGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGAGGACGCCTCCATCCTaGAGTAGAGGCGCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: GGRGCDCETGVQEWGQGGRTPPS*SRGAWR
Trigger: CCGCCAGGCGCCTCTACTCCAGGATGGAGGCGTCCT...CCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440944.6
CDS-3UTR CCA 90 bp CCTGTCCTTCATCCAGCAGCCCTGCAGCGCCACTCAGGATGCGGGTGGGAAGGGAGGGGGAGGTGGGGGTaGAGGCCCTGGAGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: PVLHPAALQRHSGCGWEGRGRWG*RPWSSQ
Trigger: CTGGCTGCTCCAGGGCCTCCACCCCCACCTCCCCCT...CCCTTCCCACCCGCATCCTGAGTGGCGCTGCAGGGCTGCTGGATGAAGGACAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR TCA 90 bp TGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGGGCCACACACACTTCTaGGACCCTGGCCAAGATCGG +
Preference number: 4 (lower is better)
Translates to: CGSLTAPGRGRHAEGPVRGHTHF*DPGQDR
Trigger: CCGATCTTGGCCAGGGTCTCAGAAGTGTGTGTGGCC...CCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291775.3
CDS-3UTR TCA 90 bp GGGGCCATGGTAGGGCCCTTGGCAGTCTTGGGAGGTGCCAAGGCTGGGTCTGGAGAGGATGCGGGAGTCTaGCAGCACCAGGTCGGGGCC +
Preference number: 4 (lower is better)
Translates to: GAMVGPLAVLGGAKAGSGEDAGV*QHQVGA
Trigger: GGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTC...TCCAGACCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCCCTACCATGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp GTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCTGTGGGGCCTTCTGTGGTTGCTaGCCTCTGGCCGGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: VGPRGTLLDGTASPGGCGAFCGC*PLAGEW
Trigger: CCACTCCCCGGCCAGAGGTCAGCAACCACAGAAGGC...CCCACAGCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp GGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCGCCTTCTGTGGTTGCTaGCCTCTGGCCGGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GLGERMRESDSTRSGPTCAFCGC*PLAGEW
Trigger: CCACTCCCCGGCCAGAGGTCAGCAACCACAGAAGGC...GCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp GAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGCGAACTTGGTGCCCTGTaGGCCCCCTCCCCATGGAGA +
Preference number: 4 (lower is better)
Translates to: EDVAVTVRPASRSGGRVGELGAL*APSPWR
Trigger: TCTCCATGGGGAGGGGGCTCACAGGGCACCAAGTTC...GCCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp TGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCTCTCCATCCTAGCCTaGGAGTGGGGCCTAGAGGCA +
Preference number: 4 (lower is better)
Translates to: CGSLTAPGRGRHAEGPVRLSILA*EWGLEA
Trigger: TGCCTCTAGGCCCCACTCTCAGGCTAGGATGGAGAG...CCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp GGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGCCACTGCCTGGTCCCTaGGCTGCCGAGACAGTTGCA +
Preference number: 4 (lower is better)
Translates to: GGRGCDCETGVQEWGQGGPLPGP*AAETVA
Trigger: TGCAACTGTCTCGGCAGCTCAGGGACCAGGCAGTGG...CCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR TCA 90 bp CCCAAGAGGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTCGTTCATGCGGGCCGTaGGCTCCCCATGGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: PKRRLRDTFGEGGGDSRVRSCGP*APHGGP
Trigger: GGGACCGCCATGGGGAGCTCACGGCCCGCATGAACG...AACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCCTCTTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR TCA 90 bp GCCTCGGGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGTGTCAGCCCTGCCATaGGCTCCCTGTGTCCATGCC +
Preference number: 4 (lower is better)
Translates to: ASGGRGCDCETGVQEWGQVSALP*APCVHA
Trigger: GGCATGGACACAGGGAGCTCATGGCAGGGCTGACAC...CTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCCCGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392944.5
CDS-3UTR GCA 90 bp GGCCATGGGGGCCAGCCCGGGATGGAAGCACGCCCTCCCACCACGGGCAGCTTGAACGCTGGTCGTCCATaGGGCTGCTCTGGAACTTGG +
Preference number: 4 (lower is better)
Translates to: GHGGQPGMEARPPTTGSLNAGRP*GCSGTW
Trigger: CCAAGTTCCAGAGCAGCCGCATGGACGACCAGCGTT...CAAGCTGCCCGTGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCCCATGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp GGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCGCGAGGTCCACCCGCTaGTCGTCCATGCGCTTAGCC +
Preference number: 4 (lower is better)
Translates to: GLGERMRESDSTRSGPTCARSTR*SSMRLA
Trigger: GGCTAAGCGCATGGACGAGCAGCGGGTGGACCTCGC...GCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp ACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCGCGAGGTCCACCCGCTaGTCGTCCATGCGCTTAGCC +
Preference number: 4 (lower is better)
Translates to: TGRAWGRGCGSLTAPGRGARSTR*SSMRLA
Trigger: GGCTAAGCGCATGGACGAGCAGCGGGTGGACCTCGC...GCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp TGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGGCTTGGGGGAGAGGATaGGGGAGTCTGACAGCACCA +
Preference number: 4 (lower is better)
Translates to: CGSLTAPGRGRHAEGPVRAWGRG*GSLTAP
Trigger: TGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGC...CCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp GAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGCTGGAGGGGTGGAGCATaGCTGTCACACGGCCATCCC +
Preference number: 4 (lower is better)
Translates to: EDVAVTVRPASRSGGRVGWRGGA*LSHGHP
Trigger: GGGATGGCCGTGTGACAGGCATGCTCCACCCCTCCA...GCCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp GGCCATGGGGGCCAGCCCGGGATGGAAGCACGCCCTCCCACCACGGGCAGCTTGCCCAGCCATTCCCTCTaGTTTAGAGATAGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: GHGGQPGMEARPPTTGSLPSHSL*FRDRPG
Trigger: GCCGGGCCTATCTCTAAAGCAGAGGGAATGGCTGGG...CAAGCTGCCCGTGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCCCATGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp GGGAGGCCGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGCCTAGGACCAGGCCCTaGCCTTTTTCCTGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: GRPWGCMPSACPRQWPREPRTRP*PFSWLG
Trigger: CCCAAGCCAGGAAAAAGGGCAGGGCCTGGTCCTAGG...CTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACGGCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp AGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGGATCCCGAACTTGGTaGCCTGTGAGCCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: RGCGSLTAPGRGRHAEGPGSRTW*PVSPLP
Trigger: GGGGAGGGGGCTCACAGGGCACCAAGTTCGGGATCC...GGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp GAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCCTGCGGCAGTCTTGGGAGGTaGCAAGGCTGGGTCTGGACA +
Preference number: 4 (lower is better)
Translates to: ESDSTRSGPTCRRPRPACGSLGR*QGWVWT
Trigger: TGTCCAGACCCAGCCTTGGCACCTCCCAAGACTGCC...GCAGGCCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp GGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGCCTCCTAGATGGAACTaGCAGCCCTGGGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GKGLGERMRESDSTRSGPPPRWN*QPWGLW
Trigger: CCACAGCCCCCAGGGCTGGCAGTTCCATCTAGGAGG...CGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp CCCAAGAGGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCGGGCACCTGTCCCTaGTCTCGGGTGCGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: PKRRLRDTFGEGGGDSRVSGTCP*SRVRPC
Trigger: GCAGGGCCGCACCCGAGAGCAGGGACAGGTGCCCGA...AACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCCTCTTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp GCCTCGGGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGTGGGCGATGCTCAGATaGCGCTGGCAGCAGACGGCA +
Preference number: 4 (lower is better)
Translates to: ASGGRGCDCETGVQEWGQWAMLR*RWQQTA
Trigger: TGCCGTCTGCTGCCAGCGGCATCTGAGCATCGCCCA...CTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCCCGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp GAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGCTGGGCGATGCTCAGATaGCGCTGGCAGCAGACGGCA +
Preference number: 4 (lower is better)
Translates to: EDVAVTVRPASRSGGRVGWAMLR*RWQQTA
Trigger: TGCCGTCTGCTGCCAGCGGCATCTGAGCATCGCCCA...GCCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp CGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGACGTGGGCCTGGTCCCTGAGCTaGCGAGACAGTTGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: RGAACPVPVLGNGLGRTWAWSLS*RDSCSV
Trigger: GACGCTGCAACTGTCTCGGCAGCTCAGGGACCAGGC...CCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp AGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCCGGCCGAGCACCAGCTaGAGCTGCGCCACGTTCATG +
Preference number: 4 (lower is better)
Translates to: RGCGSLTAPGRGRHAEGPRPSTS*SCATFM
Trigger: CATGAACGTGGCGCAGCTGCAGCTGGTGCTCGGCCG...GGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp GAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGCCTCCCCTCTCATGGGTaGTACCCCAGTCCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: EDVAVTVRPASRSGGRVGLPSHG*YPSPGL
Trigger: GAGGCCTGGACTGGGGTAGCACCCATGAGAGGGGAG...GCCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392944.5
CDS-3UTR CCA 90 bp GCCTCGGGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGTCCAGGGGACAACGCTaGTCGTCCATGCGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: ASGGRGCDCETGVQEWGQSRGQR*SSMRLL
Trigger: GAGCAGCCGCATGGACGACCAGCGTTGTCCCCTGGA...CTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCCCGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAGAACGGGAAGGGCTTGGGGGTCCTGTCCTCCAGGGTaGGGGCGGCCGTGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: DSRVSHLAGQGRTGRAWGSCPPG*GRPWPR
Trigger: CCGAGGCCACGGCCGCCCCCACCCTGGAGGACAGGA...CCCCCAAGCCCTTCCCGTTCTGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAGAACGGGAAGGGCTTGGGGGGCAGGCTGCCCACGCTaGCCCGCTGGTCGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: DSRVSHLAGQGRTGRAWGAGCPR*PAGRPA
Trigger: GGCTGGACGACCAGCGGGCCAGCGTGGGCAGCCTGC...CCCCCAAGCCCTTCCCGTTCTGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGCTGCCCTGCATTGCTGTaGGTGATTCGCAGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: EDVAVTVRPASRSGGRVGCPALL*VIRSPG
Trigger: GCCGGGGCTGCGAATCACCCACAGCAATGCAGGGCA...GCCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp ACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCGGTGGCGGGCAGCGCTaGTCATCGATCCTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: TGRAWGRGCGSLTAPGRGGGGQR*SSILED
Trigger: GTCCTCCAGGATCGATGACCAGCGCTGCCCGCCACC...GCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp AGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGGGCAGTACGTCAGGTaGCGGGCAGCGCTGGTCATC +
Preference number: 4 (lower is better)
Translates to: RGCGSLTAPGRGRHAEGPGQYVR*RAALVI
Trigger: GATGACCAGCGCTGCCCGCCACCTGACGTACTGCCC...GGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp ACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCGGGCAGTACGTCAGGTaGCGGGCAGCGCTGGTCATC +
Preference number: 4 (lower is better)
Translates to: TGRAWGRGCGSLTAPGRGGQYVR*RAALVI
Trigger: GATGACCAGCGCTGCCCGCCACCTGACGTACTGCCC...GCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCTGTGGGGCCTGTCCTCGGCAATaGCCTCGGGAGGACGTGGCT +
Preference number: 4 (lower is better)
Translates to: VGPRGTLLDGTASPGGCGACPRQ*PREDVA
Trigger: AGCCACGTCCTCCCGAGGCCATTGCCGAGGACAGGC...CCCACAGCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCCTGCAGAACGGGAAGGGCTTaGGGGAGAGGATGCGGGAGT +
Preference number: 4 (lower is better)
Translates to: ESDSTRSGPTCRRPRPACRTGRA*GRGCGS
Trigger: ACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTTCT...GCAGGCCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp ACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCTGGCCCTGTCCTTGGTaGCCCCAAGAGGCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: TGRAWGRGCGSLTAPGRGWPCPW*PQEAAQ
Trigger: CTGAGCCGCCTCTTGGGGCCACCAAGGACAGGGCCA...GCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGACATGGCCCTGTCCTTaGTGGCCCCAAGAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: GGRGCDCETGVQEWGQGGTWPCP*WPQEAA
Trigger: AGCCGCCTCTTGGGGCCACCAAGGACAGGGCCATGT...CCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp TGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGTCCCAAGACCAGCTCTaGGGGGACAGAACATGGCCC +
Preference number: 4 (lower is better)
Translates to: CGSLTAPGRGRHAEGPVRSQDQL*GDRTWP
Trigger: GGGCCATGTTCTGTCCCCCCAGAGCTGGTCTTGGGA...CCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp TGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGACGAAGCTGGAGGGGTaGAGCATGCCTGTCACACGG +
Preference number: 4 (lower is better)
Translates to: CGSLTAPGRGRHAEGPVRTKLEG*SMPVTR
Trigger: CCGTGTGACAGGCATGCTCCACCCCTCCAGCTTCGT...CCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGGGCCATGGTAGGGCCCTTGGCAGTCTTGGGAGGTGCCAAGGCTGGGTCTGGACCTCTGGCCGGGGAGTaGGGAGACAGGCTTGGAGGG +
Preference number: 4 (lower is better)
Translates to: GAMVGPLAVLGGAKAGSGPLAGE*GDRLGG
Trigger: CCCTCCAAGCCTGTCTCCCCACTCCCCGGCCAGAGG...TCCAGACCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCCCTACCATGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp CGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGACGTGGGTGGTTGCTGACCTCTaGCCGGGGAGTGGGGAGACA +
Preference number: 4 (lower is better)
Translates to: RGAACPVPVLGNGLGRTWVVADL*PGSGET
Trigger: TGTCTCCCCACTCCCCGGCCAGAGGTCAGCAACCAC...CCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp CGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGACGTGGGGCCCTTGGCAGTCTTaGGAGGTGCCAAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: RGAACPVPVLGNGLGRTWGPWQS*EVPRLG
Trigger: ACCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCC...CCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGCAGGCACCCTCCTAGATaGAACTGCCAGCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: EDVAVTVRPASRSGGRVGRHPPR*NCQPWG
Trigger: CCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCT...GCCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGAGGCACCCTCCTAGATaGAACTGCCAGCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GGRGCDCETGVQEWGQGGRHPPR*NCQPWG
Trigger: CCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCT...CCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp AGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGGGGGCGCTACGTCCTaGAGACCCTGTGTTCGGGCA +
Preference number: 4 (lower is better)
Translates to: RGCGSLTAPGRGRHAEGPGGATS*RPCVRA
Trigger: TGCCCGAACACAGGGTCTCCAGGACGTAGCGCCCCC...GGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCGGGGGCGCTACGTCCTaGAGACCCTGTGTTCGGGCA +
Preference number: 4 (lower is better)
Translates to: GLGERMRESDSTRSGPTCGGATS*RPCVRA
Trigger: TGCCCGAACACAGGGTCTCCAGGACGTAGCGCCCCC...GCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCCTGCAGGAGGTCATGCTTGTaGTATTCCAGCGCCCGGCCG +
Preference number: 4 (lower is better)
Translates to: ESDSTRSGPTCRRPRPACRRSCL*YSSARP
Trigger: CGGCCGGGCGCTGGAATACCACAAGCATGACCTCCT...GCAGGCCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp GGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGATGCTCAGATGCCGCTaGCAGCAGACGGCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: GKGLGERMRESDSTRSGPMLRCR*QQTAAS
Trigger: CGAGGCTGCCGTCTGCTGCCAGCGGCATCTGAGCAT...CGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp AGCCAGTGGGGCAACAGGCGACCACCTCCTGTCCTTCATCCAGCAGCCCTGCAGAGCAGGTGCCGCAGGTaGTACTCGGCCGCGCGCTCG +
Preference number: 4 (lower is better)
Translates to: SQWGNRRPPPVLHPAALQSRCRR*YSAARS
Trigger: CGAGCGCGCGGCCGAGTACCACCTGCGGCACCTGCT...CTGCAGGGCTGCTGGATGAAGGACAGGAGGTGGTCGCCTGTTGCCCCACTGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp CGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGACGTGGGCGCTGGGCGCCCCATaGACACGTAGGCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: RGAACPVPVLGNGLGRTWALGAP*TRRHFP
Trigger: TGGGAAATGCCTACGTGTCCATGGGGCGCCCAGCGC...CCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp AGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGCGTCCTCTTGGGTCTaGCCCCCTGGGCCTCATAGC +
Preference number: 4 (lower is better)
Translates to: RGCGSLTAPGRGRHAEGPASSWV*PPGPHS
Trigger: GCTATGAGGCCCAGGGGGCCAGACCCAAGAGGACGC...GGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp GGCCATGGGGGCCAGCCCGGGATGGAAGCACGCCCTCCCACCACGGGCAGCTTGCGCCAGTCCCCTGAATaGTGGCTGTCTCCATTCTGC +
Preference number: 4 (lower is better)
Translates to: GHGGQPGMEARPPTTGSLRQSPE*WLSPFC
Trigger: GCAGAATGGAGACAGCCACCATTCAGGGGACTGGCG...CAAGCTGCCCGTGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCCCATGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp ATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCGTCCGGGCCTTCCTaGTACTTCCTGCTCCTCACG +
Preference number: 4 (lower is better)
Translates to: MRESDSTRSGPTCRRPRPASGPS*YFLLLT
Trigger: CGTGAGGAGCAGGAAGTACCAGGAAGGCCCGGACGC...CGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp GAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGCAGCAGGGAGCCACGCTaGGTGCTTGGCCACACAGAG +
Preference number: 4 (lower is better)
Translates to: EDVAVTVRPASRSGGRVGSREPR*VLGHTE
Trigger: CTCTGTGTGGCCAAGCACCCAGCGTGGCTCCCTGCT...GCCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429455.5
CDS-3UTR CCA 90 bp TGGGGCAACAGGCGACCACCTCCTGTCCTTCATCCAGCAGCCCTGCAGCGCCACCCCAGCCCAGCCCTCTaGCTGATGCCCTCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: WGNRRPPPVLHPAALQRHPSPAL*LMPSRL
Trigger: GAGGCGAGAGGGCATCAGCCAGAGGGCTGGGCTGGG...GTGGCGCTGCAGGGCTGCTGGATGAAGGACAGGAGGTGGTCGCCTGTTGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp CCCACAGCCCAGCCCAGCCCAGCCCAGCCCAGCCCTCTGGCTGATGCCCTCTCGGCACCAGGTACGTTCTaGGAGGCAGGCATCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PTAQPSPAQPSPLADALSAPGTF*EAGIPS
Trigger: AGAAGGGATGCCTGCCTCCCAGAACGTACCTGGTGC...CGAGAGGGCATCAGCCAGAGGGCTGGGCTGGGCTGGGCTGGGCTGGGCTGTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR TCA 90 bp GGGAGGCCGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGTCTGGGAGCTGGCGATaGGGTCGAAGAATTCCTCGG +
Preference number: 4 (lower is better)
Translates to: GRPWGCMPSACPRQWPRESGSWR*GRRIPR
Trigger: CCGAGGAATTCTTCGACCTCATCGCCAGCTCCCAGA...CTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACGGCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp CCCAAGAGGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTGAGGATGCGGGAGTCTaGCAGCACCAGGTCGGGGCC +
Preference number: 4 (lower is better)
Translates to: PKRRLRDTFGEGGGDSRVEDAGV*QHQVGA
Trigger: GGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTC...AACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCCTCTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp AACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGGCCTTCTGTGGTTGCTaGCCTCTGGCCGGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: NGKGLGERMRESDSTRSGAFCGC*PLAGEW
Trigger: CCACTCCCCGGCCAGAGGTCAGCAACCACAGAAGGC...CCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp TGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGACGTGGCTGAACTTGGTGCCCTGTaGGCCCCCTCCCCATGGAGA +
Preference number: 4 (lower is better)
Translates to: WGCMPSACPRQWPREDVAELGAL*APSPWR
Trigger: TCTCCATGGGGAGGGGGCTCACAGGGCACCAAGTTC...AGCCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp GTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCTGTGGGCCCCCGCCAGTCCCCTaGATGGTGGCTGTCTCCATT +
Preference number: 4 (lower is better)
Translates to: VGPRGTLLDGTASPGGCGPPPVP*MVAVSI
Trigger: AATGGAGACAGCCACCATTCAGGGGACTGGCGGGGG...CCCACAGCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR TCA 90 bp TTCGCTTTGCAGGGGACGTTCTGTCCTGTGTCTGCAGCACTGCTGACCGGCATGGAGGCGCCGAGGAAGTaGTGTGCGCGGGGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: FALQGTFCPVSAALLTGMEAPRK*CARGAA
Trigger: GGCGGCGCCCCGCGCACATCACTTCCTCGGCGCCTC...CATGCCGGTCAGCAGTGCTGCAGACACAGGACAGAACGTCCCCTGCAAAGCGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR TCA 90 bp CTCCCACAGCCCAGCCCAGCCCAGCCCAGCCCAGCCCTCTGGCTGATGCCCTCTTCTCCTACTTGGGTCTaGGGACAGAAGCCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: LPQPSPAQPSPALWLMPSSPTWV*GQKPSL
Trigger: CAGGGAGGGCTTCTGTCCTCAGACCCAAGTAGGAGA...AGAGGGCATCAGCCAGAGGGCTGGGCTGGGCTGGGCTGGGCTGGGCTGTGGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR GCA 90 bp ACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCAGACCGGGGGCTGCTTaGCCAGGCCACACACACTTC +
Preference number: 4 (lower is better)
Translates to: TGRAWGRGCGSLTAPGRGRPGAA*PGHTHF
Trigger: GAAGTGTGTGTGGCCTGGGCAAGCAGCCCCCGGTCT...GCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000291775.3
CDS-3UTR GCA 90 bp GGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGGCCTCGGAGGTGCCCTaGATTGCTGTGGGTGATTCG +
Preference number: 4 (lower is better)
Translates to: GKGLGERMRESDSTRSGPASEVP*IAVGDS
Trigger: CGAATCACCCACAGCAATGCAGGGCACCTCCGAGGC...CGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp GCCTCGGGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGCCTCGGAGGTGCCCTaGATTGCTGTGGGTGATTCG +
Preference number: 4 (lower is better)
Translates to: ASGGRGCDCETGVQEWGQASEVP*IAVGDS
Trigger: CGAATCACCCACAGCAATGCAGGGCACCTCCGAGGC...CTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCCCGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp GGGGCCATGGTAGGGCCCTTGGCAGTCTTGGGAGGTGCCAAGGCTGGGTCTGGAGCGAGGTCCACCCGCTaGTCGTCCATGCGCTTAGCC +
Preference number: 4 (lower is better)
Translates to: GAMVGPLAVLGGAKAGSGARSTR*SSMRLA
Trigger: GGCTAAGCGCATGGACGAGCAGCGGGTGGACCTCGC...TCCAGACCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCCCTACCATGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp GGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTGCACCAGGCTGGCACTaGTGCTGGGGCTCGGGCGGG +
Preference number: 4 (lower is better)
Translates to: GGSETPLGRVGETAGFHIAPGWH*CWGSGG
Trigger: CCCGCCCGAGCCCCAGCAGCAGTGCCAGCCTGGTGC...AATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp GGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGGCTTGGGGGAGAGGATaGGGGAGTCTGACAGCACCA +
Preference number: 4 (lower is better)
Translates to: GGRGCDCETGVQEWGQGGAWGRG*GSLTAP
Trigger: TGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGC...CCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp TGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGACGTGGCTTGGAGGGGTGGAGCATaGCTGTCACACGGCCATCCC +
Preference number: 4 (lower is better)
Translates to: WGCMPSACPRQWPREDVAWRGGA*LSHGHP
Trigger: GGGATGGCCGTGTGACAGGCATGCTCCACCCCTCCA...AGCCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp AACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGGCTTGGAGGGAGCCCTaGCCCAGGACGAAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: NGKGLGERMRESDSTRSGAWREP*PRTKLE
Trigger: CTCCAGCTTCGTCCTGGGGCAGGGCTCCCTCCAAGC...CCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp GACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAGAACGGGAAGGGCTTGGGGGTCCTGTCGAGGCCCCTaGAGGGCCCTGGGACTCGGC +
Preference number: 4 (lower is better)
Translates to: DSRVSHLAGQGRTGRAWGSCRGP*RALGLG
Trigger: GCCGAGTCCCAGGGCCCTGCAGGGGCCTCGACAGGA...CCCCCAAGCCCTTCCCGTTCTGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp CTGAGAGTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCGGATCCCGAACTTGGTaGCCTGTGAGCCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LRVGPRGTLLDGTASPGGGSRTW*PVSPLP
Trigger: GGGGAGGGGGCTCACAGGGCACCAAGTTCGGGATCC...GCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCACTCTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp GGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGGGCAGTCTTGGGAGGTaGCAAGGCTGGGTCTGGACA +
Preference number: 4 (lower is better)
Translates to: GKGLGERMRESDSTRSGPGSLGR*QGWVWT
Trigger: TGTCCAGACCCAGCCTTGGCACCTCCCAAGACTGCC...CGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp AACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGTCTCGGGTGCGGCCCTaGCCCTCCAGAAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: NGKGLGERMRESDSTRSGSRVRP*PSRSRS
Trigger: TGACCTGCTTCTGGAGGGGCAGGGCCGCACCCGAGA...CCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp CTGAGAGTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCTCTCGGGTGCGGCCCTaGCCCTCCAGAAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: LRVGPRGTLLDGTASPGGSRVRP*PSRSRS
Trigger: TGACCTGCTTCTGGAGGGGCAGGGCCGCACCCGAGA...GCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCACTCTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp GAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCCTGCGGCCCTCCTCTCGGCTaGCTTGTCTCCAAACTCCTT +
Preference number: 4 (lower is better)
Translates to: ESDSTRSGPTCRRPRPACGPPLG*LVSKLL
Trigger: AAGGAGTTTGGAGACAAGGCAGCCGAGAGGAGGGCC...GCAGGCCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp GAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCCTGCGCAGCGTGTAGGTGTTaGCCAGACTGTAGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: ESDSTRSGPTCRRPRPACAACRC*PDCSRP
Trigger: AGGCCTGCTACAGTCTGGGCAACACCTACACGCTGC...GCAGGCCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp CTGAGAGTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCAGCACCAGCTGCAGCTaGGCCACGTTCATGCGGGCC +
Preference number: 4 (lower is better)
Translates to: LRVGPRGTLLDGTASPGGSTSCS*ATFMRA
Trigger: GGCCCGCATGAACGTGGCGCAGCTGCAGCTGGTGCT...GCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCACTCTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp CCTGTCCTTCATCCAGCAGCCCTGCAGCGCCACTCAGGATGCGGGTGGGAAGGGAGCACCAGCTGCAGCTaGGCCACGTTCATGCGGGCC +
Preference number: 4 (lower is better)
Translates to: PVLHPAALQRHSGCGWEGSTSCS*ATFMRA
Trigger: GGCCCGCATGAACGTGGCGCAGCTGCAGCTGGTGCT...CCCTTCCCACCCGCATCCTGAGTGGCGCTGCAGGGCTGCTGGATGAAGGACAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR GCA 90 bp GGGGCCATGGTAGGGCCCTTGGCAGTCTTGGGAGGTGCCAAGGCTGGGTCTGGACGGCCGAGCACCAGCTaGAGCTGCGCCACGTTCATG +
Preference number: 4 (lower is better)
Translates to: GAMVGPLAVLGGAKAGSGRPSTS*SCATFM
Trigger: CATGAACGTGGCGCAGCTGCAGCTGGTGCTCGGCCG...TCCAGACCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCCCTACCATGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp GGGGCCATGGTAGGGCCCTTGGCAGTCTTGGGAGGTGCCAAGGCTGGGTCTGGATCCGCGCTCAGCCTCTaGGTCCTCTTGGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: GAMVGPLAVLGGAKAGSGSALSL*VLLGLA
Trigger: GGCCAGACCCAAGAGGACGCAGAGGCTGAGCGCGGA...TCCAGACCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCCCTACCATGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp TGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCTTCCTGGTACTTCCTaGTCCTCACGGGGAGGGGTA +
Preference number: 4 (lower is better)
Translates to: CGSLTAPGRGRHAEGPVRLPGTS*SSRGGV
Trigger: TACCCCTCCCCGTGAGGAGCAGGAAGTACCAGGAAG...CCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp GGGAGGCCGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGCTTCCTGGTACTTCCTaGTCCTCACGGGGAGGGGTA +
Preference number: 4 (lower is better)
Translates to: GRPWGCMPSACPRQWPRELPGTS*SSRGGV
Trigger: TACCCCTCCCCGTGAGGAGCAGGAAGTACCAGGAAG...CTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACGGCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp GGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTCCAGCGGGGAGTGGCTaGCCTCCCGGGGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GGSETPLGRVGETAGFHIPAGSG*PPGASS
Trigger: AGAGGAGGCCCCGGGAGGGCAGCCACTCCCCGCTGG...AATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp GGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTGGGGCAGGGTGGGCCTaGCGGTGGGCACAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: GGSETPLGRVGETAGFHIGAGWA*RWAQGL
Trigger: AAGGCCCTGTGCCCACCGCCAGGCCCACCCTGCCCC...AATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp CTGAGAGTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCGCCTGTCCTCGGCAATaGCCTCGGGAGGACGTGGCT +
Preference number: 4 (lower is better)
Translates to: LRVGPRGTLLDGTASPGGACPRQ*PREDVA
Trigger: AGCCACGTCCTCCCGAGGCCATTGCCGAGGACAGGC...GCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCACTCTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTGGGTCGGGGAGGCCGTaGGGCTGCATGCCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: GGSETPLGRVGETAGFHIGSGRP*GCMPSA
Trigger: GGCACTGGGCATGCAGCCCCACGGCCTCCCCGACCC...AATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GCCTCGGGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGAGAACGGGAAGGGCTTaGGGGAGAGGATGCGGGAGT +
Preference number: 4 (lower is better)
Translates to: ASGGRGCDCETGVQEWGQRTGRA*GRGCGS
Trigger: ACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTTCT...CTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCCCGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp ACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCACATGGCCCTGTCCTTaGTGGCCCCAAGAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: TGRAWGRGCGSLTAPGRGTWPCP*WPQEAA
Trigger: AGCCGCCTCTTGGGGCCACCAAGGACAGGGCCATGT...GCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACGAAGCTGGAGGGGTaGAGCATGCCTGTCACACGG +
Preference number: 4 (lower is better)
Translates to: GKGLGERMRESDSTRSGPTKLEG*SMPVTR
Trigger: CCGTGTGACAGGCATGCTCCACCCCTCCAGCTTCGT...CGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GCCTCGGGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGACGAAGCTGGAGGGGTaGAGCATGCCTGTCACACGG +
Preference number: 4 (lower is better)
Translates to: ASGGRGCDCETGVQEWGQTKLEG*SMPVTR
Trigger: CCGTGTGACAGGCATGCTCCACCCCTCCAGCTTCGT...CTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCCCGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp AACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGGCCCCAGGACGAAGCTaGAGGGGTGGAGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: NGKGLGERMRESDSTRSGAPGRS*RGGACL
Trigger: CAGGCATGCTCCACCCCTCCAGCTTCGTCCTGGGGC...CCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp ACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCTGCCATGCGTGGTCTaGGGGGCCTTCTGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: TGRAWGRGCGSLTAPGRGLPCVV*GAFCGC
Trigger: GCAACCACAGAAGGCCCCCCAGACCACGCATGGCAG...GCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGCTAGGATCCCGAACTTaGTGCCCTGTGAGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: GKGLGERMRESDSTRSGPLGSRT*CPVSPL
Trigger: GAGGGGGCTCACAGGGCACCAAGTTCGGGATCCTAG...CGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp AGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGGCCCTTGGCAGTCTTaGGAGGTGCCAAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: RGCGSLTAPGRGRHAEGPGPWQS*EVPRLG
Trigger: ACCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCC...GGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGGGCCATGGTAGGGCCCTTGGCAGTCTTGGGAGGTGCCAAGGCTGGGTCTGGATGGAACTGCCAGCCCTaGGGGCTGTGGGGCCATGGT +
Preference number: 4 (lower is better)
Translates to: GAMVGPLAVLGGAKAGSGWNCQP*GLWGHG
Trigger: ACCATGGCCCCACAGCCCCCAGGGCTGGCAGTTCCA...TCCAGACCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCCCTACCATGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp ATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGTTCCCAGGTTTCCACTaGCCTTGGCCTCCCCCATGC +
Preference number: 4 (lower is better)
Translates to: MRESDSTRSGPTCRRPRPFPGFH*PWPPPC
Trigger: GCATGGGGGAGGCCAAGGCCAGTGGAAACCTGGGAA...CGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp CTGAGAGTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCGCGTCCTCTTGGGTCTaGCCCCCTGGGCCTCATAGC +
Preference number: 4 (lower is better)
Translates to: LRVGPRGTLLDGTASPGGASSWV*PPGPHS
Trigger: GCTATGAGGCCCAGGGGGCCAGACCCAAGAGGACGC...GCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCACTCTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp GGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCGCGTCCGGGCCTTCCTaGTACTTCCTGCTCCTCACG +
Preference number: 4 (lower is better)
Translates to: GLGERMRESDSTRSGPTCASGPS*YFLLLT
Trigger: CGTGAGGAGCAGGAAGTACCAGGAAGGCCCGGACGC...GCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp CCCAAGAGGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTCGGGATGCTCGTGCGTaGCACGTGCACCCGGACGTC +
Preference number: 4 (lower is better)
Translates to: PKRRLRDTFGEGGGDSRVRDARA*HVHPDV
Trigger: GACGTCCGGGTGCACGTGCCACGCACGAGCATCCCG...AACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCCTCTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp CTGAGAGTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCGCCACGCTGGGTGCTTaGCCACACAGAGCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LRVGPRGTLLDGTASPGGATLGA*PHRAQA
Trigger: TGCCTGCGCTCTGTGTGGCCAAGCACCCAGCGTGGC...GCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCACTCTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429455.5
CDS-3UTR CCA 90 bp CAGCGGTCCATGAATGAGGTCACCACGGTGGCCTCGCATGGCCTTGGGCCTTGCTCCGCCATGCTGGCCTaGCCTCGATCCCACCCCTCC +
Preference number: 4 (lower is better)
Translates to: QRSMNEVTTVASHGLGPCSAMLA*PRSHPS
Trigger: GGAGGGGTGGGATCGAGGCCAGGCCAGCATGGCGGA...GCAAGGCCCAAGGCCATGCGAGGCCACCGTGGTGACCTCATTCATGGACCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR TCA 90 bp GGCCATGGGGGCCAGCCCGGGATGGAAGCACGCCCTCCCACCACGGGCAGCTTGTTAGCCTGCACCCTCTaGATGAGGCTGAAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: GHGGQPGMEARPPTTGSLLACTL*MRLKKS
Trigger: GGACTTCTTCAGCCTCATTCAGAGGGTGCAGGCTAA...CAAGCTGCCCGTGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCCCATGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp GGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGTCTGCAGGGTTGAGCTaGGTGAAGCCTCCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: GGRGCDCETGVQEWGQGGSAGLS*VKPPQL
Trigger: AAGCTGGGGAGGCTTCACTCAGCTCAACCCTGCAGA...CCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp GAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGCCCATGGAGAGAGCAGTaGTGTCATCTCCCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: EDVAVTVRPASRSGGRVGPWREQ*CHLPQL
Trigger: CAGCTGGGGGAGATGACATCACTGCTCTCTCCATGG...GCCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp CTGAGAGTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCGAACTTGGTGCCCTGTaGGCCCCCTCCCCATGGAGA +
Preference number: 4 (lower is better)
Translates to: LRVGPRGTLLDGTASPGGELGAL*APSPWR
Trigger: TCTCCATGGGGAGGGGGCTCACAGGGCACCAAGTTC...GCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCACTCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp GCCTCGGGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGAGCGCCCCAGGACCTTaGGTGTGTTTCCCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: ASGGRGCDCETGVQEWGQSAPGP*VCFPGF
Trigger: GAAACCTGGGAAACACACTCAAGGTCCTGGGGCGCT...CTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCCCGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR TCA 90 bp AACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCACTGCCTGGTCCCTaGGCTGCCGAGACAGTTGCA +
Preference number: 4 (lower is better)
Translates to: NGKGLGERMRESDSTRSGPLPGP*AAETVA
Trigger: TGCAACTGTCTCGGCAGCTCAGGGACCAGGCAGTGG...CCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR TCA 90 bp AGGCCCTGGAGCAGCCAGTGGGGCAACAGGCGACCACCTCCTGTCCTTCATCCACCAGCTCCTGGGCAATaGGCAGGTGCCGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: RPWSSQWGNRRPPPVLHPPAPGQ*AGAAGG
Trigger: ACCACCTGCGGCACCTGCTCATTGCCCAGGAGCTGG...TGGATGAAGGACAGGAGGTGGTCGCCTGTTGCCCCACTGGCTGCTCCAGGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR GCA 90 bp ATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGAACGCTGGTCGTCCATaGGGCTGCTCTGGAACTTGG +
Preference number: 4 (lower is better)
Translates to: MRESDSTRSGPTCRRPRPNAGRP*GCSGTW
Trigger: CCAAGTTCCAGAGCAGCCGCATGGACGACCAGCGTT...CGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp ACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCGCCTCGGAGGTGCCCTaGATTGCTGTGGGTGATTCG +
Preference number: 4 (lower is better)
Translates to: TGRAWGRGCGSLTAPGRGASEVP*IAVGDS
Trigger: CGAATCACCCACAGCAATGCAGGGCACCTCCGAGGC...GCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp TGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGACGTGGCTGCCTCGGAGGTGCCCTaGATTGCTGTGGGTGATTCG +
Preference number: 4 (lower is better)
Translates to: WGCMPSACPRQWPREDVAASEVP*IAVGDS
Trigger: CGAATCACCCACAGCAATGCAGGGCACCTCCGAGGC...AGCCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp ACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCGCTTGGGGGAGAGGATaGGGGAGTCTGACAGCACCA +
Preference number: 4 (lower is better)
Translates to: TGRAWGRGCGSLTAPGRGAWGRG*GSLTAP
Trigger: TGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGC...GCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp GTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCTGTGGGCCTAGGACCAGGCCCTaGCCTTTTTCCTGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: VGPRGTLLDGTASPGGCGPRTRP*PFSWLG
Trigger: CCCAAGCCAGGAAAAAGGGCAGGGCCTGGTCCTAGG...CCCACAGCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp AGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCCCTAGGACCAGGCCCTaGCCTTTTTCCTGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: RGCGSLTAPGRGRHAEGPPRTRP*PFSWLG
Trigger: CCCAAGCCAGGAAAAAGGGCAGGGCCTGGTCCTAGG...GGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp CCCAAGAGGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTGGATCCCGAACTTGGTaGCCTGTGAGCCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: PKRRLRDTFGEGGGDSRVGSRTW*PVSPLP
Trigger: GGGGAGGGGGCTCACAGGGCACCAAGTTCGGGATCC...AACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCCTCTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp AGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGGCAGTCTTGGGAGGTaGCAAGGCTGGGTCTGGACA +
Preference number: 4 (lower is better)
Translates to: RGCGSLTAPGRGRHAEGPGSLGR*QGWVWT
Trigger: TGTCCAGACCCAGCCTTGGCACCTCCCAAGACTGCC...GGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp GAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGCGCCAGCAGGAGGTCATaGTTGTGGTATTCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: EDVAVTVRPASRSGGRVGASRRS*LWYSSA
Trigger: GGCGCTGGAATACCACAAGCATGACCTCCTGCTGGC...GCCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp GCCTCGGGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGCCAGCAGGAGGTCATaGTTGTGGTATTCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: ASGGRGCDCETGVQEWGQASRRS*LWYSSA
Trigger: GGCGCTGGAATACCACAAGCATGACCTCCTGCTGGC...CTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCCCGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp GGCAGGCATCCCTTCTCGGGGGCTGGCAAACTCAAGACCTTTGGGAGTGGGGGACCTTGGCCTCCCCCATaGGGTCACCGATGGTCCGCG +
Preference number: 4 (lower is better)
Translates to: GRHPFSGAGKLKTFGSGGPWPPP*GHRWSA
Trigger: CGCGGACCATCGGTGACCGCATGGGGGAGGCCAAGG...TCCCCCACTCCCAAAGGTCTTGAGTTTGCCAGCCCCCGAGAAGGGATGCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR GCA 90 bp GGGGCCATGGTAGGGCCCTTGGCAGTCTTGGGAGGTGCCAAGGCTGGGTCTGGACCTGCTCTTGGGCGATaGTCAGATGCCGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: GAMVGPLAVLGGAKAGSGPALGR*SDAAGS
Trigger: GCTGCCAGCGGCATCTGAGCATCGCCCAAGAGCAGG...TCCAGACCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCCCTACCATGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp GGTCACCACGGTGGCCTCGCATGGCCTTGGGCCTTGCCTGATTACTGCCCCAGGCCTGCTCTTGGGCGATaGTCAGATGCCGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: GHHGGLAWPWALPDYCPRPALGR*SDAAGS
Trigger: GCTGCCAGCGGCATCTGAGCATCGCCCAAGAGCAGG...CCTGGGGCAGTAATCAGGCAAGGCCCAAGGCCATGCGAGGCCACCGTGGTGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR GCA 90 bp GGGAGGCCGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGCGTTCCAGGACAGTTaGTTGCCTTTGGCGTGGTAC +
Preference number: 4 (lower is better)
Translates to: GRPWGCMPSACPRQWPREAFQDS*LPLAWY
Trigger: GTACCACGCCAAAGGCAAGCAACTGTCCTGGAACGC...CTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACGGCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp TGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGGCGTTCCAGGACAGTTaGTTGCCTTTGGCGTGGTAC +
Preference number: 4 (lower is better)
Translates to: CGSLTAPGRGRHAEGPVRAFQDS*LPLAWY
Trigger: GTACCACGCCAAAGGCAAGCAACTGTCCTGGAACGC...CCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp ACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCGTCCTGCGTGGCGTTTaGGGCGTTCCAGGACAGTTG +
Preference number: 4 (lower is better)
Translates to: TGRAWGRGCGSLTAPGRGVLRGV*GVPGQL
Trigger: CAACTGTCCTGGAACGCCGCAAACGCCACGCAGGAC...GCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp GGGAGGCCGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGAGAACTCGGAGGCCTTaGACAGGGTCTCTCGGACAT +
Preference number: 4 (lower is better)
Translates to: GRPWGCMPSACPRQWPRERTRRP*TGSLGH
Trigger: ATGTCCGAGAGACCCTGTGCAAGGCCTCCGAGTTCT...CTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACGGCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp CCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAGGGTGTTGCCCAGGTTaGCGTAGGCCCTGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: PLGRVGETAGFHIWQGRAGCCPG*RRPCPA
Trigger: CGCAGGGCAGGGCCTACGGCAACCTGGGCAACACCC...TGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp GAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCCTGCACAAATAGTGGGTGTTaGCCAGGTTGCCGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: ESDSTRSGPTCRRPRPACTNSGC*PGCRRP
Trigger: GGGCCTACGGCAACCTGGGCAACACCCACTATTTGT...GCAGGCCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp CCCAAGAGGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTGGGCGTTCCCCAGGTTaGTGTAGGCCCTCCTCTCGG +
Preference number: 4 (lower is better)
Translates to: PKRRLRDTFGEGGGDSRVGRSPG*CRPSSR
Trigger: CCGAGAGGAGGGCCTACAGCAACCTGGGGAACGCCC...AACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCCTCTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp GAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGCGCAGCGTGTAGGTGTTaGCCAGACTGTAGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: EDVAVTVRPASRSGGRVGAACRC*PDCSRP
Trigger: AGGCCTGCTACAGTCTGGGCAACACCTACACGCTGC...GCCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp GGCCATGGGGGCCAGCCCGGGATGGAAGCACGCCCTCCCACCACGGGCAGCTTGTCCATGCGGCTGCTCTaGAACTTGGTCAACAGGTCA +
Preference number: 4 (lower is better)
Translates to: GHGGQPGMEARPPTTGSLSMRLL*NLVNRS
Trigger: TGACCTGTTGACCAAGTTCCAGAGCAGCCGCATGGA...CAAGCTGCCCGTGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCCCATGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAGAACGGGAAGGGCTTGGGGGTCGGCAGCCCCGGCCTaGCCATCGTCCAGGGGACAA +
Preference number: 4 (lower is better)
Translates to: DSRVSHLAGQGRTGRAWGSAAPA*PSSRGQ
Trigger: TTGTCCCCTGGACGATGGCCAGGCCGGGGCTGCCGA...CCCCCAAGCCCTTCCCGTTCTGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGAAGAATTCCTCGGTCTaGGGCGAGGCCGTCATCGAG +
Preference number: 4 (lower is better)
Translates to: GKGLGERMRESDSTRSGPKNSSV*GEAVIE
Trigger: CTCGATGACGGCCTCGCCCCAGACCGAGGAATTCTT...CGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GCCTCGGGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGAAGAATTCCTCGGTCTaGGGCGAGGCCGTCATCGAG +
Preference number: 4 (lower is better)
Translates to: ASGGRGCDCETGVQEWGQKNSSV*GEAVIE
Trigger: CTCGATGACGGCCTCGCCCCAGACCGAGGAATTCTT...CTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCCCGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp AACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGTGCCCTGCATTGCTGTaGGTGATTCGCAGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: NGKGLGERMRESDSTRSGCPALL*VIRSPG
Trigger: GCCGGGGCTGCGAATCACCCACAGCAATGCAGGGCA...CCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCAGAACGGGAAGGGCTTaGGGGAGAGGATGCGGGAGT +
Preference number: 4 (lower is better)
Translates to: GLGERMRESDSTRSGPTCRTGRA*GRGCGS
Trigger: ACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTTCT...GCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGCGCAGGGTTTCACATTTaGCAGGGCAGGGCAGAACGG +
Preference number: 4 (lower is better)
Translates to: EDVAVTVRPASRSGGRVGAGFHI*QGRAER
Trigger: CCGTTCTGCCCTGCCCTGCCAAATGTGAAACCCTGC...GCCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp CGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGACGTGGGCAGGGTTTCACATTTaGCAGGGCAGGGCAGAACGG +
Preference number: 4 (lower is better)
Translates to: RGAACPVPVLGNGLGRTWAGFHI*QGRAER
Trigger: CCGTTCTGCCCTGCCCTGCCAAATGTGAAACCCTGC...CCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCGCTCAGAGACACCTTTaGGGAGGGTGGGGGAGACAG +
Preference number: 4 (lower is better)
Translates to: GLGERMRESDSTRSGPTCAQRHL*GGWGRQ
Trigger: CTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGC...GCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp AACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGACATGGCCCTGTCCTTaGTGGCCCCAAGAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: NGKGLGERMRESDSTRSGTWPCP*WPQEAA
Trigger: AGCCGCCTCTTGGGGCCACCAAGGACAGGGCCATGT...CCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp AGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCTCCCAAGACCAGCTCTaGGGGGACAGAACATGGCCC +
Preference number: 4 (lower is better)
Translates to: RGCGSLTAPGRGRHAEGPSQDQL*GDRTWP
Trigger: GGGCCATGTTCTGTCCCCCCAGAGCTGGTCTTGGGA...GGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCTGTGGGACGAAGCTGGAGGGGTaGAGCATGCCTGTCACACGG +
Preference number: 4 (lower is better)
Translates to: VGPRGTLLDGTASPGGCGTKLEG*SMPVTR
Trigger: CCGTGTGACAGGCATGCTCCACCCCTCCAGCTTCGT...CCCACAGCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp CCCAAGAGGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTGCCCCAGGACGAAGCTaGAGGGGTGGAGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: PKRRLRDTFGEGGGDSRVAPGRS*RGGACL
Trigger: CAGGCATGCTCCACCCCTCCAGCTTCGTCCTGGGGC...AACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCCTCTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp CCCAAGAGGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTGGAACTGCCAGCCCTaGGGGCTGTGGGGCCATGGT +
Preference number: 4 (lower is better)
Translates to: PKRRLRDTFGEGGGDSRVWNCQP*GLWGHG
Trigger: ACCATGGCCCCACAGCCCCCAGGGCTGGCAGTTCCA...AACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCCTCTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGGGCCATGGTAGGGCCCTTGGCAGTCTTGGGAGGTGCCAAGGCTGGGTCTGGAGGTTTCCACTGGCCTTaGCCTCCCCCATGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: GAMVGPLAVLGGAKAGSGGFHWP*PPPCGH
Trigger: GTGACCGCATGGGGGAGGCCAAGGCCAGTGGAAACC...TCCAGACCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCCCTACCATGGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp CCCAAGAGGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTCGCCCCAGGAAGACGTaGGCGTTCCCCAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: PKRRLRDTFGEGGGDSRVRPRKT*AFPRLL
Trigger: CAGCAACCTGGGGAACGCCCACGTCTTCCTGGGGCG...AACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCCTCTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp GACCACCTCCTGTCCTTCATCCAGCAGCCCTGCAGCGCCACTCAGGATGCGGGTCTGTCGGCCAGCTCCTaGGCAATGAGCAGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: DHLLSFIQQPCSATQDAGLSASS*AMSRCR
Trigger: GCGGCACCTGCTCATTGCCCAGGAGCTGGCCGACAG...ACCCGCATCCTGAGTGGCGCTGCAGGGCTGCTGGATGAAGGACAGGAGGTGGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp TGGGGCAACAGGCGACCACCTCCTGTCCTTCATCCAGCAGCCCTGCAGCGCCACGCGCTGGGCGCCCCATaGACACGTAGGCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: WGNRRPPPVLHPAALQRHALGAP*TRRHFP
Trigger: TGGGAAATGCCTACGTGTCCATGGGGCGCCCAGCGC...GTGGCGCTGCAGGGCTGCTGGATGAAGGACAGGAGGTGGTCGCCTGTTGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp AGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCTCTGCAGGTGCTTCTTaGCGAAGGTCAGGGCCTGCG +
Preference number: 4 (lower is better)
Translates to: RGCGSLTAPGRGRHAEGPSAGAS*RRSGPA
Trigger: CGCAGGCCCTGACCTTCGCCAAGAAGCACCTGCAGA...GGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp CCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTTGGCAGGGCAGGGCACGGGATGCTCGTGCGTaGCACGTGCACCCGGACGTC +
Preference number: 4 (lower is better)
Translates to: PLGRVGETAGFHIWQGRARDARA*HVHPDV
Trigger: GACGTCCGGGTGCACGTGCCACGCACGAGCATCCCG...TGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp GGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGTCCCCAGCCTTGGCCTaGAACACTTCCCAGACATCC +
Preference number: 4 (lower is better)
Translates to: GGRGCDCETGVQEWGQGGSPALA*NTSQTS
Trigger: GGATGTCTGGGAAGTGTTCCAGGCCAAGGCTGGGGA...CCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392944.5
CDS-3UTR CCA 90 bp AGCCAGTGGGGCAACAGGCGACCACCTCCTGTCCTTCATCCAGCAGCCCTGCAGAGGACGCCTCCATCCTaGAGTAGAGGCGCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: SQWGNRRPPPVLHPAALQRTPPS*SRGAWR
Trigger: CCGCCAGGCGCCTCTACTCCAGGATGGAGGCGTCCT...CTGCAGGGCTGCTGGATGAAGGACAGGAGGTGGTCGCCTGTTGCCCCACTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR TCA 90 bp TGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGACGTGGCTTCTGGGAGCTGGCGATaGGGTCGAAGAATTCCTCGG +
Preference number: 4 (lower is better)
Translates to: WGCMPSACPRQWPREDVASGSWR*GRRIPR
Trigger: CCGAGGAATTCTTCGACCTCATCGCCAGCTCCCAGA...AGCCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp GGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCTCTGGGAGCTGGCGATaGGGTCGAAGAATTCCTCGG +
Preference number: 4 (lower is better)
Translates to: GLGERMRESDSTRSGPTCSGSWR*GRRIPR
Trigger: CCGAGGAATTCTTCGACCTCATCGCCAGCTCCCAGA...GCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp GTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCTGTGGGCCATGGAGAGAGCAGTaGTGTCATCTCCCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: VGPRGTLLDGTASPGGCGPWREQ*CHLPQL
Trigger: CAGCTGGGGGAGATGACATCACTGCTCTCTCCATGG...CCCACAGCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp GGTCACCACGGTGGCCTCGCATGGCCTTGGGCCTTGCCTGATTACTGCCCCAGGGCCTTGGGCCTTGCCTaGTTACTGCCCCAGGCACAT +
Preference number: 4 (lower is better)
Translates to: GHHGGLAWPWALPDYCPRALGLA*LLPQAH
Trigger: ATGTGCCTGGGGCAGTAATCAGGCAAGGCCCAAGGC...CCTGGGGCAGTAATCAGGCAAGGCCCAAGGCCATGCGAGGCCACCGTGGTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR GCA 90 bp CTGAGAGTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCATCGGGACTCTAACCTaGCCCCTGTCGGCTACCCCT +
Preference number: 4 (lower is better)
Translates to: LRVGPRGTLLDGTASPGGIGTLT*PLSATP
Trigger: AGGGGTAGCCGACAGGGGGCAGGTTAGAGTCCCGAT...GCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCACTCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000291775.3
CDS-3UTR GCA 90 bp GGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGGGTCGTCCATGCGGCTaGTCTGGAACTTGGTCAACA +
Preference number: 4 (lower is better)
Translates to: GKGLGERMRESDSTRSGPGRPCG*SGTWST
Trigger: TGTTGACCAAGTTCCAGAGCAGCCGCATGGACGACC...CGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp CTGAGAGTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCGCCTCGGAGGTGCCCTaGATTGCTGTGGGTGATTCG +
Preference number: 4 (lower is better)
Translates to: LRVGPRGTLLDGTASPGGASEVP*IAVGDS
Trigger: CGAATCACCCACAGCAATGCAGGGCACCTCCGAGGC...GCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCACTCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp CCCAAGAGGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTGGAGGGGTGGAGCATaGCTGTCACACGGCCATCCC +
Preference number: 4 (lower is better)
Translates to: PKRRLRDTFGEGGGDSRVWRGGA*LSHGHP
Trigger: GGGATGGCCGTGTGACAGGCATGCTCCACCCCTCCA...AACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCCTCTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp GACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAGAACGGGAAGGGCTTGGGGGGGATCCCGAACTTGGTaGCCTGTGAGCCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: DSRVSHLAGQGRTGRAWGGSRTW*PVSPLP
Trigger: GGGGAGGGGGCTCACAGGGCACCAAGTTCGGGATCC...CCCCCAAGCCCTTCCCGTTCTGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp CCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTTGGCAGGGCAGGGCATCTCGGGTGCGGCCCTaGCCCTCCAGAAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: PLGRVGETAGFHIWQGRASRVRP*PSRSRS
Trigger: TGACCTGCTTCTGGAGGGGCAGGGCCGCACCCGAGA...TGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp GAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGCGGTAGAAGTAGGCGTTaGCCAGCTGGCTGTAGATGG +
Preference number: 4 (lower is better)
Translates to: EDVAVTVRPASRSGGRVGGRSRR*PAGCRW
Trigger: CCATCTACAGCCAGCTGGGCAACGCCTACTTCTACC...GCCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp ATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGGTAGAAGTAGGCGTTaGCCAGCTGGCTGTAGATGG +
Preference number: 4 (lower is better)
Translates to: MRESDSTRSGPTCRRPRPGRSRR*PAGCRW
Trigger: CCATCTACAGCCAGCTGGGCAACGCCTACTTCTACC...CGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp GGGGCCATGGTAGGGCCCTTGGCAGTCTTGGGAGGTGCCAAGGCTGGGTCTGGAGTCCTGCGTGGCGTTTaGGGCGTTCCAGGACAGTTG +
Preference number: 4 (lower is better)
Translates to: GAMVGPLAVLGGAKAGSGVLRGV*GVPGQL
Trigger: CAACTGTCCTGGAACGCCGCAAACGCCACGCAGGAC...TCCAGACCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCCCTACCATGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp TCCCTTCTCGGGGGCTGGCAAACTCAAGACCTTTGGGAGTGGGGGACACATGGGAGGTGCCCGGGGTCCTaGGTGGCGTTTGCGGCGTTC +
Preference number: 4 (lower is better)
Translates to: SLLGGWQTQDLWEWGTHGRCPGS*VAFAAF
Trigger: GAACGCCGCAAACGCCACGCAGGACCCCGGGCACCT...CCCATGTGTCCCCCACTCCCAAAGGTCTTGAGTTTGCCAGCCCCCGAGAAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR GCA 90 bp TACGTTCTGGGAGGCAGGCATCCCTTCTCGGGGGCTGGCAAACTCAAGACCTTTGGTTGCCGTAGGCCCTaGCCTGCGCCGCACGGTCGC +
Preference number: 4 (lower is better)
Translates to: YVLGGRHPFSGAGKLKTFGCRRP*PAPHGR
Trigger: GCGACCGTGCGGCGCAGGGCAGGGCCTACGGCAACC...AAAGGTCTTGAGTTTGCCAGCCCCCGAGAAGGGATGCCTGCCTCCCAGAACGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR GCA 90 bp CGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGACGTGGACAAATAGTGGGTGTTaGCCAGGTTGCCGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: RGAACPVPVLGNGLGRTWTNSGC*PGCRRP
Trigger: GGGCCTACGGCAACCTGGGCAACACCCACTATTTGT...CCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp ACGTTCTGTCCTGTGTCTGCAGCACTGCTGACCGGCATGGGACGACCAGCGGTCGGGCGTTCCCCAGGTTaGTGTAGGCCCTCCTCTCGG +
Preference number: 4 (lower is better)
Translates to: TFCPVSAALLTGMGRPAVGRSPG*CRPSSR
Trigger: CCGAGAGGAGGGCCTACAGCAACCTGGGGAACGCCC...GACCGCTGGTCGTCCCATGCCGGTCAGCAGTGCTGCAGACACAGGACAGAACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR GCA 90 bp AGCCAGTGGGGCAACAGGCGACCACCTCCTGTCCTTCATCCAGCAGCCCTGCAGTGGGCAATGAGCAGGTaGCGCAGGTGGTACTCGGCC +
Preference number: 4 (lower is better)
Translates to: SQWGNRRPPPVLHPAALQWAMSR*RRWYSA
Trigger: GGCCGAGTACCACCTGCGGCACCTGCTCATTGCCCA...CTGCAGGGCTGCTGGATGAAGGACAGGAGGTGGTCGCCTGTTGCCCCACTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR GCA 90 bp GCCTCGGGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGTGGGAGATCTGCAGGTaGTTCTTGGCGAAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: ASGGRGCDCETGVQEWGQWEICR*FLAKVR
Trigger: CCTGACCTTCGCCAAGAAGCACCTGCAGATCTCCCA...CTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCCCGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp GACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAGAACGGGAAGGGCTTGGGGGTCCGCGCTCAGCCTCTaGGTCCTCTTGGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: DSRVSHLAGQGRTGRAWGSALSL*VLLGLA
Trigger: GGCCAGACCCAAGAGGACGCAGAGGCTGAGCGCGGA...CCCCCAAGCCCTTCCCGTTCTGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp CAGCGGTCCATGAATGAGGTCACCACGGTGGCCTCGCATGGCCTTGGGCCTTGCCCATTTTCTGGCGGCTaGCACCTCCGCCATGCTGGC +
Preference number: 4 (lower is better)
Translates to: QRSMNEVTTVASHGLGPCPFSGG*HLRHAG
Trigger: GCCAGCATGGCGGAGGTGGCAGCCGCCAGAAAATGG...GCAAGGCCCAAGGCCATGCGAGGCCACCGTGGTGACCTCATTCATGGACCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR GCA 90 bp GGCAGGCATCCCTTCTCGGGGGCTGGCAAACTCAAGACCTTTGGGAGTGGGGGACAGCGCCACTCAGGATaGGGGTGGGAAGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GRHPFSGAGKLKTFGSGGQRHSG*GWEGLR
Trigger: CCTGAGCCCTTCCCACCCGCATCCTGAGTGGCGCTG...TCCCCCACTCCCAAAGGTCTTGAGTTTGCCAGCCCCCGAGAAGGGATGCCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp GGCCATGGGGGCCAGCCCGGGATGGAAGCACGCCCTCCCACCACGGGCAGCTTGGGCTGCTCTGGAACTTaGTCAACAGGTCAAAGAAGC +
Preference number: 4 (lower is better)
Translates to: GHGGQPGMEARPPTTGSLGCSGT*STGQRS
Trigger: GCTTCTTTGACCTGTTGACCAAGTTCCAGAGCAGCC...CAAGCTGCCCGTGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCCCATGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCAAGAATTCCTCGGTCTaGGGCGAGGCCGTCATCGAG +
Preference number: 4 (lower is better)
Translates to: GLGERMRESDSTRSGPTCKNSSV*GEAVIE
Trigger: CTCGATGACGGCCTCGCCCCAGACCGAGGAATTCTT...GCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp AGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCAAGAATTCCTCGGTCTaGGGCGAGGCCGTCATCGAG +
Preference number: 4 (lower is better)
Translates to: RGCGSLTAPGRGRHAEGPKNSSV*GEAVIE
Trigger: CTCGATGACGGCCTCGCCCCAGACCGAGGAATTCTT...GGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCTGTGGGAAGAATTCCTCGGTCTaGGGCGAGGCCGTCATCGAG +
Preference number: 4 (lower is better)
Translates to: VGPRGTLLDGTASPGGCGKNSSV*GEAVIE
Trigger: CTCGATGACGGCCTCGCCCCAGACCGAGGAATTCTT...CCCACAGCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp CCCAAGAGGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTGCCCTGCATTGCTGTaGGTGATTCGCAGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: PKRRLRDTFGEGGGDSRVCPALL*VIRSPG
Trigger: GCCGGGGCTGCGAATCACCCACAGCAATGCAGGGCA...AACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCCTCTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAGAACGGGAAGGGCTTGGGGGGCCCCAGGACGAAGCTaGAGGGGTGGAGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: DSRVSHLAGQGRTGRAWGAPGRS*RGGACL
Trigger: CAGGCATGCTCCACCCCTCCAGCTTCGTCCTGGGGC...CCCCCAAGCCCTTCCCGTTCTGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGCCATGGGGGCCAGCCCGGGATGGAAGCACGCCCTCCCACCACGGGCAGCTTGCCTGGCTTGGGGTTTTaGAATGTCGAAGTTCATGCC +
Preference number: 4 (lower is better)
Translates to: GHGGQPGMEARPPTTGSLPGLGF*NVEVHA
Trigger: GGCATGAACTTCGACATTCCAAAACCCCAAGCCAGG...CAAGCTGCCCGTGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCCCATGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp AACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCTAGGATCCCGAACTTaGTGCCCTGTGAGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: NGKGLGERMRESDSTRSGLGSRT*CPVSPL
Trigger: GAGGGGGCTCACAGGGCACCAAGTTCGGGATCCTAG...CCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp CCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAGCAACCTCAGGCCCCTaGGGCCCATCTCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: PLGRVGETAGFHIWQGRAATSGP*GPSQAP
Trigger: TGGAGCCTGAGATGGGCCCCAGGGGCCTGAGGTTGC...TGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAGAACGGGAAGGGCTTGGGGGGGGGGCGCTACGTCCTaGAGACCCTGTGTTCGGGCA +
Preference number: 4 (lower is better)
Translates to: DSRVSHLAGQGRTGRAWGGGATS*RPCVRA
Trigger: TGCCCGAACACAGGGTCTCCAGGACGTAGCGCCCCC...CCCCCAAGCCCTTCCCGTTCTGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTC
64% GC, longest homopolymer 10 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCCTGCCCAGCTGGCTGTAGATaGCACTCAGTGTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: ESDSTRSGPTCRRPRPACPAGCR*HSVSSG
Trigger: ACCTGAAGACACTGAGTGCCATCTACAGCCAGCTGG...GCAGGCCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp GACCACCTCCTGTCCTTCATCCAGCAGCCCTGCAGCGCCACTCAGGATGCGGGTGGTTTCCACTGGCCTTaGCCTCCCCCATGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: DHLLSFIQQPCSATQDAGGFHWP*PPPCGH
Trigger: GTGACCGCATGGGGGAGGCCAAGGCCAGTGGAAACC...ACCCGCATCCTGAGTGGCGCTGCAGGGCTGCTGGATGAAGGACAGGAGGTGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp TGGGGCAACAGGCGACCACCTCCTGTCCTTCATCCAGCAGCCCTGCAGCGCCACTTCCCAGGTTTCCACTaGCCTTGGCCTCCCCCATGC +
Preference number: 4 (lower is better)
Translates to: WGNRRPPPVLHPAALQRHFPGFH*PWPPPC
Trigger: GCATGGGGGAGGCCAAGGCCAGTGGAAACCTGGGAA...GTGGCGCTGCAGGGCTGCTGGATGAAGGACAGGAGGTGGTCGCCTGTTGCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp CCCAAGAGGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTGCCAGGCGCTCCTTGTaGAAGGTCGTGGCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: PKRRLRDTFGEGGGDSRVARRSL*KVVASV
Trigger: CACAGAGGCCACGACCTTCCACAAGGAGCGCCTGGC...AACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCCTCTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp GACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAGAACGGGAAGGGCTTGGGGGCGCCCCAGGAAGACGTaGGCGTTCCCCAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: DSRVSHLAGQGRTGRAWGRPRKT*AFPRLL
Trigger: CAGCAACCTGGGGAACGCCCACGTCTTCCTGGGGCG...CCCCCAAGCCCTTCCCGTTCTGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp GGGGCCATGGTAGGGCCCTTGGCAGTCTTGGGAGGTGCCAAGGCTGGGTCTGGACGGTCCCCGATCTCCTaGGAGATCTGCAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: GAMVGPLAVLGGAKAGSGRSPIS*EICRCF
Trigger: GAAGCACCTGCAGATCTCCCAGGAGATCGGGGACCG...TCCAGACCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCCCTACCATGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp GTCACCACGGTGGCCTCGCATGGCCTTGGGCCTTGCCTGATTACTGCCCCAGGCCACTCAGGATGCGGGTaGGAAGGGCTCAGGGTGAAC +
Preference number: 4 (lower is better)
Translates to: VTTVASHGLGPCLITAPGHSGCG*EGLRVN
Trigger: GTTCACCCTGAGCCCTTCCCACCCGCATCCTGAGTG...GCCTGGGGCAGTAATCAGGCAAGGCCCAAGGCCATGCGAGGCCACCGTGGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp ACGTTCTGTCCTGTGTCTGCAGCACTGCTGACCGGCATGGGACGACCAGCGGTCCCCTGGAGCAGCCAGTaGGGCAACAGGCGACCACCT +
Preference number: 4 (lower is better)
Translates to: TFCPVSAALLTGMGRPAVPWSSQ*GNRRPP
Trigger: AGGTGGTCGCCTGTTGCCCCACTGGCTGCTCCAGGG...GACCGCTGGTCGTCCCATGCCGGTCAGCAGTGCTGCAGACACAGGACAGAACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp CTGGGAGGCAGGCATCCCTTCTCGGGGGCTGGCAAACTCAAGACCTTTGGGAGTTGGGGGTGGAGGCCCTaGAGCAGCCAGTGGGGCAAC +
Preference number: 4 (lower is better)
Translates to: LGGRHPFSGAGKLKTFGSWGWRP*SSQWGN
Trigger: GTTGCCCCACTGGCTGCTCCAGGGCCTCCACCCCCA...ACTCCCAAAGGTCTTGAGTTTGCCAGCCCCCGAGAAGGGATGCCTGCCTCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp AGCCAGTGGGGCAACAGGCGACCACCTCCTGTCCTTCATCCAGCAGCCCTGCAGATGAGGTCACCACGGTaGCCTCGCATGGCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: SQWGNRRPPPVLHPAALQMRSPR*PRMALG
Trigger: GCCCAAGGCCATGCGAGGCCACCGTGGTGACCTCAT...CTGCAGGGCTGCTGGATGAAGGACAGGAGGTGGTCGCCTGTTGCCCCACTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR TCA 90 bp GGGGCCATGGTAGGGCCCTTGGCAGTCTTGGGAGGTGCCAAGGCTGGGTCTGGATCTGGGAGCTGGCGATaGGGTCGAAGAATTCCTCGG +
Preference number: 4 (lower is better)
Translates to: GAMVGPLAVLGGAKAGSGSGSWR*GRRIPR
Trigger: CCGAGGAATTCTTCGACCTCATCGCCAGCTCCCAGA...TCCAGACCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCCCTACCATGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp GAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGCTTAGCCTGCACCCTCTaGATGAGGCTGAAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: EDVAVTVRPASRSGGRVGLACTL*MRLKKS
Trigger: GGACTTCTTCAGCCTCATTCAGAGGGTGCAGGCTAA...GCCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp AACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCATGGAGAGAGCAGTaGTGTCATCTCCCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: NGKGLGERMRESDSTRSGPWREQ*CHLPQL
Trigger: CAGCTGGGGGAGATGACATCACTGCTCTCTCCATGG...CCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp GACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAGAACGGGAAGGGCTTGGGGGGAACTTGGTGCCCTGTaGGCCCCCTCCCCATGGAGA +
Preference number: 4 (lower is better)
Translates to: DSRVSHLAGQGRTGRAWGELGAL*APSPWR
Trigger: TCTCCATGGGGAGGGGGCTCACAGGGCACCAAGTTC...CCCCCAAGCCCTTCCCGTTCTGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp CCCAAGAGGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTCTCTCCATCCTAGCCTaGGAGTGGGGCCTAGAGGCA +
Preference number: 4 (lower is better)
Translates to: PKRRLRDTFGEGGGDSRVLSILA*EWGLEA
Trigger: TGCCTCTAGGCCCCACTCTCAGGCTAGGATGGAGAG...AACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCCTCTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp TGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGTTGGAAAGGACCCATTaGCAACATGGCACAGACGTG +
Preference number: 4 (lower is better)
Translates to: CGSLTAPGRGRHAEGPVRLERTH*QHGTDV
Trigger: CACGTCTGTGCCATGTTGTCAATGGGTCCTTTCCAA...CCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp GGGAGGCCGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGTTGGAAAGGACCCATTaGCAACATGGCACAGACGTG +
Preference number: 4 (lower is better)
Translates to: GRPWGCMPSACPRQWPRELERTH*QHGTDV
Trigger: CACGTCTGTGCCATGTTGTCAATGGGTCCTTTCCAA...CTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACGGCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp GAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCCTGCTTGGAAAGGACCCATTaGCAACATGGCACAGACGTG +
Preference number: 4 (lower is better)
Translates to: ESDSTRSGPTCRRPRPACLERTH*QHGTDV
Trigger: CACGTCTGTGCCATGTTGTCAATGGGTCCTTTCCAA...GCAGGCCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp CCTGTCCTTCATCCAGCAGCCCTGCAGCGCCACTCAGGATGCGGGTGGGAAGGGAGCGCCCCAGGACCTTaGGTGTGTTTCCCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: PVLHPAALQRHSGCGWEGSAPGP*VCFPGF
Trigger: GAAACCTGGGAAACACACTCAAGGTCCTGGGGCGCT...CCCTTCCCACCCGCATCCTGAGTGGCGCTGCAGGGCTGCTGGATGAAGGACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR TCA 90 bp GGCAGGCATCCCTTCTCGGGGGCTGGCAAACTCAAGACCTTTGGGAGTGGGGGACCACTGCCTGGTCCCTaGGCTGCCGAGACAGTTGCA +
Preference number: 4 (lower is better)
Translates to: GRHPFSGAGKLKTFGSGGPLPGP*AAETVA
Trigger: TGCAACTGTCTCGGCAGCTCAGGGACCAGGCAGTGG...TCCCCCACTCCCAAAGGTCTTGAGTTTGCCAGCCCCCGAGAAGGGATGCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR TCA 90 bp GGCAGGCATCCCTTCTCGGGGGCTGGCAAACTCAAGACCTTTGGGAGTGGGGGAGGGAAGGGCTCAGGGTaGACCTCAGGCCTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: GRHPFSGAGKLKTFGSGGGKGSG*TSGLCC
Trigger: ACAGCACAGGCCTGAGGTTCACCCTGAGCCCTTCCC...TCCCCCACTCCCAAAGGTCTTGAGTTTGCCAGCCCCCGAGAAGGGATGCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR GCA 90 bp CTGAGAGTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCAACGCTGGTCGTCCATaGGGCTGCTCTGGAACTTGG +
Preference number: 4 (lower is better)
Translates to: LRVGPRGTLLDGTASPGGNAGRP*GCSGTW
Trigger: CCAAGTTCCAGAGCAGCCGCATGGACGACCAGCGTT...GCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCACTCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp CCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTTGGCAGGGCAGGGCATGGAGGGGTGGAGCATaGCTGTCACACGGCCATCCC +
Preference number: 4 (lower is better)
Translates to: PLGRVGETAGFHIWQGRAWRGGA*LSHGHP
Trigger: GGGATGGCCGTGTGACAGGCATGCTCCACCCCTCCA...TGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp AACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCCAGCCATTCCCTCTaGTTTAGAGATAGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: NGKGLGERMRESDSTRSGPSHSL*FRDRPG
Trigger: GCCGGGCCTATCTCTAAAGCAGAGGGAATGGCTGGG...CCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp CCCAAGAGGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTGGCAGTCTTGGGAGGTaGCAAGGCTGGGTCTGGACA +
Preference number: 4 (lower is better)
Translates to: PKRRLRDTFGEGGGDSRVGSLGR*QGWVWT
Trigger: TGTCCAGACCCAGCCTTGGCACCTCCCAAGACTGCC...AACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCCTCTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp CCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTTGGCAGGGCAGGGCACCTCCTAGATGGAACTaGCAGCCCTGGGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PLGRVGETAGFHIWQGRAPPRWN*QPWGLW
Trigger: CCACAGCCCCCAGGGCTGGCAGTTCCATCTAGGAGG...TGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp CCCAAGAGGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTCGCCATACACCACCTTaGACACGGCCTTCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: PKRRLRDTFGEGGGDSRVRHTPP*TRPSPP
Trigger: TGGCGGAGAAGGCCGTGTGCAAGGTGGTGTATGGCG...AACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCCTCTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354753.7
CDS-3UTR GCA 90 bp GTTCTGTCCTGTGTCTGCAGCACTGCTGACCGGCATGGGACGACCAGCGGTCCATGGGCGATGCTCAGATaGCGCTGGCAGCAGACGGCA +
Preference number: 4 (lower is better)
Translates to: VLSCVCSTADRHGTTSGPWAMLR*RWQQTA
Trigger: TGCCGTCTGCTGCCAGCGGCATCTGAGCATCGCCCA...TGGACCGCTGGTCGTCCCATGCCGGTCAGCAGTGCTGCAGACACAGGACAGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR GCA 90 bp CCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTTGGCAGGGCAGGGCACCTGCTCTTGGGCGATaGTCAGATGCCGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: PLGRVGETAGFHIWQGRAPALGR*SDAAGS
Trigger: GCTGCCAGCGGCATCTGAGCATCGCCCAAGAGCAGG...TGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp AGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCTGGGAGATCTGCAGGTaGTTCTTGGCGAAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: RGCGSLTAPGRGRHAEGPWEICR*FLAKVR
Trigger: CCTGACCTTCGCCAAGAAGCACCTGCAGATCTCCCA...GGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp GGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTGGGAGCCACGCTGGGTaGTTGGCCACACAGAGCGCA +
Preference number: 4 (lower is better)
Translates to: GGSETPLGRVGETAGFHIGSHAG*LATQSA
Trigger: TGCGCTCTGTGTGGCCAAGCACCCAGCGTGGCTCCC...AATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429455.5
CDS-3UTR GCA 90 bp GACCACCTCCTGTCCTTCATCCAGCAGCCCTGCAGCGCCACTCAGGATGCGGGTTTCATCCAGCAGCCCTaGAGCGCCACTCAGGATGCG +
Preference number: 4 (lower is better)
Translates to: DHLLSFIQQPCSATQDAGFIQQP*SATQDA
Trigger: CGCATCCTGAGTGGCGCTGCAGGGCTGCTGGATGAA...ACCCGCATCCTGAGTGGCGCTGCAGGGCTGCTGGATGAAGGACAGGAGGTGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR GCA 90 bp GTCACCACGGTGGCCTCGCATGGCCTTGGGCCTTGCCTGATTACTGCCCCAGGCGCCTTGCCTGATTACTaGCCCAGGCACATAGGGCTC +
Preference number: 4 (lower is better)
Translates to: VTTVASHGLGPCLITAPGALPDY*PRHIGL
Trigger: GAGCCCTATGTGCCTGGGGCAGTAATCAGGCAAGGC...GCCTGGGGCAGTAATCAGGCAAGGCCCAAGGCCATGCGAGGCCACCGTGGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp GAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGCTCCATGCGGCTGCTCTaGAACTTGGTCAACAGGTCA +
Preference number: 4 (lower is better)
Translates to: EDVAVTVRPASRSGGRVGSMRLL*NLVNRS
Trigger: TGACCTGTTGACCAAGTTCCAGAGCAGCCGCATGGA...GCCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp CCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTTGGCAGGGCAGGGCATCCAGGGGACAACGCTaGTCGTCCATGCGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PLGRVGETAGFHIWQGRASRGQR*SSMRLL
Trigger: GAGCAGCCGCATGGACGACCAGCGTTGTCCCCTGGA...TGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAGAACGGGAAGGGCTTGGGGGTCCAGGGGACAACGCTaGTCGTCCATGCGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: DSRVSHLAGQGRTGRAWGSRGQR*SSMRLL
Trigger: GAGCAGCCGCATGGACGACCAGCGTTGTCCCCTGGA...CCCCCAAGCCCTTCCCGTTCTGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAGAACGGGAAGGGCTTGGGGGTGCCCTGCATTGCTGTaGGTGATTCGCAGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: DSRVSHLAGQGRTGRAWGCPALL*VIRSPG
Trigger: GCCGGGGCTGCGAATCACCCACAGCAATGCAGGGCA...CCCCCAAGCCCTTCCCGTTCTGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGCCATGGGGGCCAGCCCGGGATGGAAGCACGCCCTCCCACCACGGGCAGCTTGTCGATCCTGGAGGACTaGTACTTGATGAGCATGTTG +
Preference number: 4 (lower is better)
Translates to: GHGGQPGMEARPPTTGSLSILED*YLMSML
Trigger: CAACATGCTCATCAAGTACCAGTCCTCCAGGATCGA...CAAGCTGCCCGTGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCCCATGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTGGGCAGTACGTCAGGTaGCGGGCAGCGCTGGTCATC +
Preference number: 4 (lower is better)
Translates to: GGSETPLGRVGETAGFHIGQYVR*RAALVI
Trigger: GATGACCAGCGCTGCCCGCCACCTGACGTACTGCCC...AATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp CCCAAGAGGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTAGAACGGGAAGGGCTTaGGGGAGAGGATGCGGGAGT +
Preference number: 4 (lower is better)
Translates to: PKRRLRDTFGEGGGDSRVRTGRA*GRGCGS
Trigger: ACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTTCT...AACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCCTCTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp CCCAAGAGGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTGCTCAGAGACACCTTTaGGGAGGGTGGGGGAGACAG +
Preference number: 4 (lower is better)
Translates to: PKRRLRDTFGEGGGDSRVAQRHL*GGWGRQ
Trigger: CTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGC...AACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCCTCTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTTGGCCCTGTCCTTGGTaGCCCCAAGAGGCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GGSETPLGRVGETAGFHIWPCPW*PQEAAQ
Trigger: CTGAGCCGCCTCTTGGGGCCACCAAGGACAGGGCCA...AATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp CCCAAGAGGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCCCAAGACCAGCTCTaGGGGGACAGAACATGGCCC +
Preference number: 4 (lower is better)
Translates to: PKRRLRDTFGEGGGDSRVSQDQL*GDRTWP
Trigger: GGGCCATGTTCTGTCCCCCCAGAGCTGGTCTTGGGA...AACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCCTCTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp CCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTTGGCAGGGCAGGGCACTGCCATGCGTGGTCTaGGGGGCCTTCTGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: PLGRVGETAGFHIWQGRALPCVV*GAFCGC
Trigger: GCAACCACAGAAGGCCCCCCAGACCACGCATGGCAG...TGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp CCCAAGAGGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTCTAGGATCCCGAACTTaGTGCCCTGTGAGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: PKRRLRDTFGEGGGDSRVLGSRT*CPVSPL
Trigger: GAGGGGGCTCACAGGGCACCAAGTTCGGGATCCTAG...AACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCCTCTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp CCCAAGAGGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTTCCCAGGTTTCCACTaGCCTTGGCCTCCCCCATGC +
Preference number: 4 (lower is better)
Translates to: PKRRLRDTFGEGGGDSRVFPGFH*PWPPPC
Trigger: GCATGGGGGAGGCCAAGGCCAGTGGAAACCTGGGAA...AACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCCTCTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp CAGGTACGTTCTGGGAGGCAGGCATCCCTTCTCGGGGGCTGGCAAACTCAAGACCGCCCCAGGAAGACGTaGGCGTTCCCCAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: QVRSGRQASLLGGWQTQDRPRKT*AFPRLL
Trigger: CAGCAACCTGGGGAACGCCCACGTCTTCCTGGGGCG...GTCTTGAGTTTGCCAGCCCCCGAGAAGGGATGCCTGCCTCCCAGAACGTACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp TCCTGTCCTTCATCCAGCAGCCCTGCAGCGCCACTCAGGATGCGGGTGGGAAGGCGGTCCCCGATCTCCTaGGAGATCTGCAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: SCPSSSSPAAPLRMRVGRRSPIS*EICRCF
Trigger: GAAGCACCTGCAGATCTCCCAGGAGATCGGGGACCG...CCTTCCCACCCGCATCCTGAGTGGCGCTGCAGGGCTGCTGGATGAAGGACAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp ACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCAGTCCCCTGAATGGTaGCTGTCTCCATTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TGRAWGRGCGSLTAPGRGQSPEW*LSPFCS
Trigger: GGAGCAGAATGGAGACAGCCACCATTCAGGGGACTG...GCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp CTGAGAGTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCCGCCAGTCCCCTGAATaGTGGCTGTCTCCATTCTGC +
Preference number: 4 (lower is better)
Translates to: LRVGPRGTLLDGTASPGGRQSPE*WLSPFC
Trigger: GCAGAATGGAGACAGCCACCATTCAGGGGACTGGCG...GCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCACTCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp TTCGCTTTGCAGGGGACGTTCTGTCCTGTGTCTGCAGCACTGCTGACCGGCATGCCACCTCCGCCATGCTaGCCTGGCCTCGATCCCACC +
Preference number: 4 (lower is better)
Translates to: FALQGTFCPVSAALLTGMPPPPC*PGLDPT
Trigger: GGTGGGATCGAGGCCAGGCCAGCATGGCGGAGGTGG...CATGCCGGTCAGCAGTGCTGCAGACACAGGACAGAACGTCCCCTGCAAAGCGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp CTCCCACAGCCCAGCCCAGCCCAGCCCAGCCCAGCCCTCTGGCTGATGCCCTCTGAGGCCAAGAAGAACTaGCTTGTAGGCGCCATTTTC +
Preference number: 4 (lower is better)
Translates to: LPQPSPAQPSPALWLMPSEAKKN*LVGAIF
Trigger: GAAAATGGCGCCTACAAGCCAGTTCTTCTTGGCCTC...AGAGGGCATCAGCCAGAGGGCTGGGCTGGGCTGGGCTGGGCTGGGCTGTGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp GTTCTGTCCTGTGTCTGCAGCACTGCTGACCGGCATGGGACGACCAGCGGTCCACACGGTGGCCTCGCATaGCCTTGGGCCTTGCCTGAT +
Preference number: 4 (lower is better)
Translates to: VLSCVCSTADRHGTTSGPHGGLA*PWALPD
Trigger: ATCAGGCAAGGCCCAAGGCCATGCGAGGCCACCGTG...TGGACCGCTGGTCGTCCCATGCCGGTCAGCAGTGCTGCAGACACAGGACAGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp GTTCTGTCCTGTGTCTGCAGCACTGCTGACCGGCATGGGACGACCAGCGGTCCACTGGTGTTCCCAGCCTaGTCCTTAGCAGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: VLSCVCSTADRHGTTSGPLVFPA*SLAGLG
Trigger: CCCCAGGCCTGCTAAGGACCAGGCTGGGAACACCAG...TGGACCGCTGGTCGTCCCATGCCGGTCAGCAGTGCTGCAGACACAGGACAGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR TCA 90 bp GGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCTTAGCCTGCACCCTCTaGATGAGGCTGAAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: GLGERMRESDSTRSGPTCLACTL*MRLKKS
Trigger: GGACTTCTTCAGCCTCATTCAGAGGGTGCAGGCTAA...GCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp ACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCTTAGCCTGCACCCTCTaGATGAGGCTGAAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: TGRAWGRGCGSLTAPGRGLACTL*MRLKKS
Trigger: GGACTTCTTCAGCCTCATTCAGAGGGTGCAGGCTAA...GCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp CCCAAGAGGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCTGCAGGGTTGAGCTaGGTGAAGCCTCCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: PKRRLRDTFGEGGGDSRVSAGLS*VKPPQL
Trigger: AAGCTGGGGAGGCTTCACTCAGCTCAACCCTGCAGA...AACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCCTCTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp GACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAGAACGGGAAGGGCTTGGGGGCTCTCCATCCTAGCCTaGGAGTGGGGCCTAGAGGCA +
Preference number: 4 (lower is better)
Translates to: DSRVSHLAGQGRTGRAWGLSILA*EWGLEA
Trigger: TGCCTCTAGGCCCCACTCTCAGGCTAGGATGGAGAG...CCCCCAAGCCCTTCCCGTTCTGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp GGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGAGGTCGTGGCCTCTGTaGAGTTCCCCAACAAATAGT +
Preference number: 4 (lower is better)
Translates to: GKGLGERMRESDSTRSGPRSWPL*SSPTNS
Trigger: ACTATTTGTTGGGGAACTTCACAGAGGCCACGACCT...CGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR TCA 90 bp ATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGAGGTCGTGGCCTCTGTaGAGTTCCCCAACAAATAGT +
Preference number: 4 (lower is better)
Translates to: MRESDSTRSGPTCRRPRPRSWPL*SSPTNS
Trigger: ACTATTTGTTGGGGAACTTCACAGAGGCCACGACCT...CGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR TCA 90 bp GGCAGGCATCCCTTCTCGGGGGCTGGCAAACTCAAGACCTTTGGGAGTGGGGGAACGACCAGCGGTCCATaGATGAGGTCACCACGGTGG +
Preference number: 4 (lower is better)
Translates to: GRHPFSGAGKLKTFGSGGTTSGP*MRSPRW
Trigger: CCACCGTGGTGACCTCATTCATGGACCGCTGGTCGT...TCCCCCACTCCCAAAGGTCTTGAGTTTGCCAGCCCCCGAGAAGGGATGCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR GCA 90 bp GACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAGAACGGGAAGGGCTTGGGGGGCTTGGGGGAGAGGATaGGGGAGTCTGACAGCACCA +
Preference number: 4 (lower is better)
Translates to: DSRVSHLAGQGRTGRAWGAWGRG*GSLTAP
Trigger: TGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGC...CCCCCAAGCCCTTCCCGTTCTGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp ACCACCTCCTGTCCTTCATCCAGCAGCCCTGCAGCGCCACTCAGGATGCGGGTGGCCAGCAGGAGGTCATaGTTGTGGTATTCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: TTSCPSSSSPAAPLRMRVASRRS*LWYSSA
Trigger: GGCGCTGGAATACCACAAGCATGACCTCCTGCTGGC...CACCCGCATCCTGAGTGGCGCTGCAGGGCTGCTGGATGAAGGACAGGAGGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR GCA 90 bp GGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCTCCAGGACAGTTGCTTaGCTTTGGCGTGGTACACGT +
Preference number: 4 (lower is better)
Translates to: GLGERMRESDSTRSGPTCSRTVA*LWRGTR
Trigger: ACGTGTACCACGCCAAAGGCAAGCAACTGTCCTGGA...GCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp TGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGACGTGGCTTCCAGGACAGTTGCTTaGCTTTGGCGTGGTACACGT +
Preference number: 4 (lower is better)
Translates to: WGCMPSACPRQWPREDVASRTVA*LWRGTR
Trigger: ACGTGTACCACGCCAAAGGCAAGCAACTGTCCTGGA...AGCCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp CCCAAGAGGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTGGCCCTCCTCTCGGCTaGCTTGTCTCCAAACTCCTT +
Preference number: 4 (lower is better)
Translates to: PKRRLRDTFGEGGGDSRVGPPLG*LVSKLL
Trigger: AAGGAGTTTGGAGACAAGGCAGCCGAGAGGAGGGCC...AACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCCTCTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp CAGGTACGTTCTGGGAGGCAGGCATCCCTTCTCGGGGGCTGGCAAACTCAAGACGCCTGGTCCCTGAGCTaGCGAGACAGTTGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: QVRSGRQASLLGGWQTQDAWSLS*RDSCSV
Trigger: GACGCTGCAACTGTCTCGGCAGCTCAGGGACCAGGC...GTCTTGAGTTTGCCAGCCCCCGAGAAGGGATGCCTGCCTCCCAGAACGTACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR GCA 90 bp CTCCCACAGCCCAGCCCAGCCCAGCCCAGCCCAGCCCTCTGGCTGATGCCCTCTTTAGTCTTTTCGCTTTaGAGGGGACGTTCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: LPQPSPAQPSPALWLMPSLVFSL*RGRSVL
Trigger: CAGGACAGAACGTCCCCTGCAAAGCGAAAAGACTAA...AGAGGGCATCAGCCAGAGGGCTGGGCTGGGCTGGGCTGGGCTGGGCTGTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR GCA 90 bp CAGGTACGTTCTGGGAGGCAGGCATCCCTTCTCGGGGGCTGGCAAACTCAAGACTGCCCCTCACCCACCTaGCAGCCACCTCAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: QVRSGRQASLLGGWQTQDCPSPT*QPPQEV
Trigger: GACTTCCTGAGGTGGCTGGCAGGTGGGTGAGGGGCA...GTCTTGAGTTTGCCAGCCCCCGAGAAGGGATGCCTGCCTCCCAGAACGTACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp GAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGCGGCTGCTCTGGAACTTaGTCAACAGGTCAAAGAAGC +
Preference number: 4 (lower is better)
Translates to: EDVAVTVRPASRSGGRVGGCSGT*STGQRS
Trigger: GCTTCTTTGACCTGTTGACCAAGTTCCAGAGCAGCC...GCCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp ACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCTCCATGCGGCTGCTCTaGAACTTGGTCAACAGGTCA +
Preference number: 4 (lower is better)
Translates to: TGRAWGRGCGSLTAPGRGSMRLL*NLVNRS
Trigger: TGACCTGTTGACCAAGTTCCAGAGCAGCCGCATGGA...GCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAGAACGGGAAGGGCTTGGGGGGCTCAGAGACACCTTTaGGGAGGGTGGGGGAGACAG +
Preference number: 4 (lower is better)
Translates to: DSRVSHLAGQGRTGRAWGAQRHL*GGWGRQ
Trigger: CTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGC...CCCCCAAGCCCTTCCCGTTCTGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTGTGGTTGCTGACCTCTaGCCGGGGAGTGGGGAGACA +
Preference number: 4 (lower is better)
Translates to: GGSETPLGRVGETAGFHIVVADL*PGSGET
Trigger: TGTCTCCCCACTCCCCGGCCAGAGGTCAGCAACCAC...AATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGGAGGCCGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGCCCTTTTTCCTGGCTTaGGGTTTTGGAATGTCGAAG +
Preference number: 4 (lower is better)
Translates to: GRPWGCMPSACPRQWPREPFFLA*GFGMSK
Trigger: CTTCGACATTCCAAAACCCCAAGCCAGGAAAAAGGG...CTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACGGCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTAGGCACCCTCCTAGATaGAACTGCCAGCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GGSETPLGRVGETAGFHIRHPPR*NCQPWG
Trigger: CCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCT...AATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GCAGGCATCCCTTCTCGGGGGCTGGCAAACTCAAGACCTTTGGGAGTGGGGGACAGGAGGTCATGCTTGTaGTATTCCAGCGCCCGGCCG +
Preference number: 4 (lower is better)
Translates to: AGIPSRGLANSRPLGVGDRRSCL*YSSARP
Trigger: CGGCCGGGCGCTGGAATACCACAAGCATGACCTCCT...GTCCCCCACTCCCAAAGGTCTTGAGTTTGCCAGCCCCCGAGAAGGGATGCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp ACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCTGCTTGCCTTTGGCGTaGTACACGTTCCCGATGTTG +
Preference number: 4 (lower is better)
Translates to: TGRAWGRGCGSLTAPGRGCLPLA*YTFPML
Trigger: CAACATCGGGAACGTGTACCACGCCAAAGGCAAGCA...GCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp ACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCACAGTTGCTTGCCTTTaGCGTGGTACACGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: TGRAWGRGCGSLTAPGRGTVACL*RGTRSR
Trigger: TCGGGAACGTGTACCACGCCAAAGGCAAGCAACTGT...GCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp GGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTGCGCTGGGCGCCCCATaGACACGTAGGCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: GGSETPLGRVGETAGFHIALGAP*TRRHFP
Trigger: TGGGAAATGCCTACGTGTCCATGGGGCGCCCAGCGC...AATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp CCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTTGGCAGGGCAGGGCATCTGCAGGTGCTTCTTaGCGAAGGTCAGGGCCTGCG +
Preference number: 4 (lower is better)
Translates to: PLGRVGETAGFHIWQGRASAGAS*RRSGPA
Trigger: CGCAGGCCCTGACCTTCGCCAAGAAGCACCTGCAGA...TGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp CTGAGAGTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCCAGTCCCCTGAATGGTaGCTGTCTCCATTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LRVGPRGTLLDGTASPGGQSPEW*LSPFCS
Trigger: GGAGCAGAATGGAGACAGCCACCATTCAGGGGACTG...GCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCACTCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp ACCACCTCCTGTCCTTCATCCAGCAGCCCTGCAGCGCCACTCAGGATGCGGGTGCACCACATCCAAGCCTaGTGTTCCCAGCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: TTSCPSSSSPAAPLRMRVHHIQA*CSQPGP
Trigger: AGGACCAGGCTGGGAACACCAGGCTTGGATGTGGTG...CACCCGCATCCTGAGTGGCGCTGCAGGGCTGCTGGATGAAGGACAGGAGGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR TCA 90 bp GACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAGAACGGGAAGGGCTTGGGGGTCTGCAGGGTTGAGCTaGGTGAAGCCTCCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: DSRVSHLAGQGRTGRAWGSAGLS*VKPPQL
Trigger: AAGCTGGGGAGGCTTCACTCAGCTCAACCCTGCAGA...CCCCCAAGCCCTTCCCGTTCTGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp CCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTTGGCAGGGCAGGGCATCTGCAGGGTTGAGCTaGGTGAAGCCTCCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: PLGRVGETAGFHIWQGRASAGLS*VKPPQL
Trigger: AAGCTGGGGAGGCTTCACTCAGCTCAACCCTGCAGA...TGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp GGCCATGGGGGCCAGCCCGGGATGGAAGCACGCCCTCCCACCACGGGCAGCTTGAACATGGCACAGACGTaGGCAATAAATACGCACATA +
Preference number: 4 (lower is better)
Translates to: GHGGQPGMEARPPTTGSLNMAQT*AINTHI
Trigger: TATGTGCGTATTTATTGCTCACGTCTGTGCCATGTT...CAAGCTGCCCGTGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCCCATGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp CCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAAGCGCCCCAGGACCTTaGGTGTGTTTCCCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: PLGRVGETAGFHIWQGRASAPGP*VCFPGF
Trigger: GAAACCTGGGAAACACACTCAAGGTCCTGGGGCGCT...TGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR TCA 90 bp GATAAGAAAAAGAAACTCCGGCAGCCCAGCACCACATCCAAGCCTGGTGTTCCCCGTTCATGCGGGCCGTaGGCTCCCCATGGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: DKKKKLRQPSTTSKPGVPRSCGP*APHGGP
Trigger: GGGACCGCCATGGGGAGCTCACGGCCCGCATGAACG...GGGAACACCAGGCTTGGATGTGGTGCTGGGCTGCCGGAGTTTCTTTTTCTTATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR GCA 90 bp CCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAAACGCTGGTCGTCCATaGGGCTGCTCTGGAACTTGG +
Preference number: 4 (lower is better)
Translates to: PLGRVGETAGFHIWQGRANAGRP*GCSGTW
Trigger: CCAAGTTCCAGAGCAGCCGCATGGACGACCAGCGTT...TGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp GACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAGAACGGGAAGGGCTTGGGGGCCCAGCCATTCCCTCTaGTTTAGAGATAGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: DSRVSHLAGQGRTGRAWGPSHSL*FRDRPG
Trigger: GCCGGGCCTATCTCTAAAGCAGAGGGAATGGCTGGG...CCCCCAAGCCCTTCCCGTTCTGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp GGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTCCTAGGACCAGGCCCTaGCCTTTTTCCTGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: GGSETPLGRVGETAGFHIPRTRP*PFSWLG
Trigger: CCCAAGCCAGGAAAAAGGGCAGGGCCTGGTCCTAGG...AATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp CTGGGAGGCAGGCATCCCTTCTCGGGGGCTGGCAAACTCAAGACCTTTGGGAGTGTCCTGCGTGGCGTTTaGGGCGTTCCAGGACAGTTG +
Preference number: 4 (lower is better)
Translates to: LGGRHPFSGAGKLKTFGSVLRGV*GVPGQL
Trigger: CAACTGTCCTGGAACGCCGCAAACGCCACGCAGGAC...ACTCCCAAAGGTCTTGAGTTTGCCAGCCCCCGAGAAGGGATGCCTGCCTCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR GCA 90 bp CAGCGGTCCATGAATGAGGTCACCACGGTGGCCTCGCATGGCCTTGGGCCTTGCACAAATAGTGGGTGTTaGCCAGGTTGCCGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: QRSMNEVTTVASHGLGPCTNSGC*PGCRRP
Trigger: GGGCCTACGGCAACCTGGGCAACACCCACTATTTGT...GCAAGGCCCAAGGCCATGCGAGGCCACCGTGGTGACCTCATTCATGGACCGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR GCA 90 bp GCAGGCATCCCTTCTCGGGGGCTGGCAAACTCAAGACCTTTGGGAGTGGGGGACGCAGCGTGTAGGTGTTaGCCAGACTGTAGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: AGIPSRGLANSRPLGVGDAACRC*PDCSRP
Trigger: AGGCCTGCTACAGTCTGGGCAACACCTACACGCTGC...GTCCCCCACTCCCAAAGGTCTTGAGTTTGCCAGCCCCCGAGAAGGGATGCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR GCA 90 bp AGGCCCTGGAGCAGCCAGTGGGGCAACAGGCGACCACCTCCTGTCCTTCATCCATGGGAGATCTGCAGGTaGTTCTTGGCGAAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: RPWSSQWGNRRPPPVLHPWEICR*FLAKVR
Trigger: CCTGACCTTCGCCAAGAAGCACCTGCAGATCTCCCA...TGGATGAAGGACAGGAGGTGGTCGCCTGTTGCCCCACTGGCTGCTCCAGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp TGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGACGTGGCTGGCTGCTCTGGAACTTaGTCAACAGGTCAAAGAAGC +
Preference number: 4 (lower is better)
Translates to: WGCMPSACPRQWPREDVAGCSGT*STGQRS
Trigger: GCTTCTTTGACCTGTTGACCAAGTTCCAGAGCAGCC...AGCCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp CTGAGAGTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCTCCATGCGGCTGCTCTaGAACTTGGTCAACAGGTCA +
Preference number: 4 (lower is better)
Translates to: LRVGPRGTLLDGTASPGGSMRLL*NLVNRS
Trigger: TGACCTGTTGACCAAGTTCCAGAGCAGCCGCATGGA...GCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCACTCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp AACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGTCCATGCGGCTGCTCTaGAACTTGGTCAACAGGTCA +
Preference number: 4 (lower is better)
Translates to: NGKGLGERMRESDSTRSGSMRLL*NLVNRS
Trigger: TGACCTGTTGACCAAGTTCCAGAGCAGCCGCATGGA...CCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGCTCGATCCTGGAGGACTaGTACTTGATGAGCATGTTG +
Preference number: 4 (lower is better)
Translates to: EDVAVTVRPASRSGGRVGSILED*YLMSML
Trigger: CAACATGCTCATCAAGTACCAGTCCTCCAGGATCGA...GCCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp CCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAGCAGGGTTTCACATTTaGCAGGGCAGGGCAGAACGG +
Preference number: 4 (lower is better)
Translates to: PLGRVGETAGFHIWQGRAAGFHI*QGRAER
Trigger: CCGTTCTGCCCTGCCCTGCCAAATGTGAAACCCTGC...TGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCTGTGGGCCTGGCTTGGGGTTTTaGAATGTCGAAGTTCATGCC +
Preference number: 4 (lower is better)
Translates to: VGPRGTLLDGTASPGGCGPGLGF*NVEVHA
Trigger: GGCATGAACTTCGACATTCCAAAACCCCAAGCCAGG...CCCACAGCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGCCCCTTTTTCCTGGCTTaGGGTTTTGGAATGTCGAAG +
Preference number: 4 (lower is better)
Translates to: EDVAVTVRPASRSGGRVGPFFLA*GFGMSK
Trigger: CTTCGACATTCCAAAACCCCAAGCCAGGAAAAAGGG...GCCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTCTAGGATCCCGAACTTaGTGCCCTGTGAGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: GGSETPLGRVGETAGFHILGSRT*CPVSPL
Trigger: GAGGGGGCTCACAGGGCACCAAGTTCGGGATCCTAG...AATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGGGCCATGGTAGGGCCCTTGGCAGTCTTGGGAGGTGCCAAGGCTGGGTCTGGACCAGCTGGCTGTAGATaGCACTCAGTGTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: GAMVGPLAVLGGAKAGSGPAGCR*HSVSSG
Trigger: ACCTGAAGACACTGAGTGCCATCTACAGCCAGCTGG...TCCAGACCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCCCTACCATGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp CTGAGAGTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCTGCTTGCCTTTGGCGTaGTACACGTTCCCGATGTTG +
Preference number: 4 (lower is better)
Translates to: LRVGPRGTLLDGTASPGGCLPLA*YTFPML
Trigger: CAACATCGGGAACGTGTACCACGCCAAAGGCAAGCA...GCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCACTCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp GGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTCGGTCCCCGATCTCCTaGGAGATCTGCAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: GGSETPLGRVGETAGFHIRSPIS*EICRCF
Trigger: GAAGCACCTGCAGATCTCCCAGGAGATCGGGGACCG...AATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp ATTAGTCTTTTCGCTTTGCAGGGGACGTTCTGTCCTGTGTCTGCAGCACTGCTGTGGAGTAGAGGCGCCTaGCGGCCGGGCCCGGGAGCT +
Preference number: 4 (lower is better)
Translates to: ISLFALQGTFCPVSAALLWSRGA*RPGPGA
Trigger: AGCTCCCGGGCCCGGCCGCCAGGCGCCTCTACTCCA...CAGCAGTGCTGCAGACACAGGACAGAACGTCCCCTGCAAAGCGAAAAGACTAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp GGTCACCACGGTGGCCTCGCATGGCCTTGGGCCTTGCCTGATTACTGCCCCAGGCAAACTCAAGACCTTTaGGAGTGGGGGACACATGGG +
Preference number: 4 (lower is better)
Translates to: GHHGGLAWPWALPDYCPRQTQDL*EWGTHG
Trigger: CCCATGTGTCCCCCACTCCCAAAGGTCTTGAGTTTG...CCTGGGGCAGTAATCAGGCAAGGCCCAAGGCCATGCGAGGCCACCGTGGTGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp ACCACCTCCTGTCCTTCATCCAGCAGCCCTGCAGCGCCACTCAGGATGCGGGTGTCCCTTCTCGGGGGCTaGCAAACTCAAGACCTTTGG +
Preference number: 4 (lower is better)
Translates to: TTSCPSSSSPAAPLRMRVSLLGG*QTQDLW
Trigger: CCAAAGGTCTTGAGTTTGCCAGCCCCCGAGAAGGGA...CACCCGCATCCTGAGTGGCGCTGCAGGGCTGCTGGATGAAGGACAGGAGGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR TCA 90 bp TGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGAACATGGCACAGACGTaGGCAATAAATACGCACATA +
Preference number: 4 (lower is better)
Translates to: CGSLTAPGRGRHAEGPVRNMAQT*AINTHI
Trigger: TATGTGCGTATTTATTGCTCACGTCTGTGCCATGTT...CCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp GAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCCTGCAACATGGCACAGACGTaGGCAATAAATACGCACATA +
Preference number: 4 (lower is better)
Translates to: ESDSTRSGPTCRRPRPACNMAQT*AINTHI
Trigger: TATGTGCGTATTTATTGCTCACGTCTGTGCCATGTT...GCAGGCCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp GGGGCCATGGTAGGGCCCTTGGCAGTCTTGGGAGGTGCCAAGGCTGGGTCTGGATTGGAAAGGACCCATTaGCAACATGGCACAGACGTG +
Preference number: 4 (lower is better)
Translates to: GAMVGPLAVLGGAKAGSGLERTH*QHGTDV
Trigger: CACGTCTGTGCCATGTTGTCAATGGGTCCTTTCCAA...TCCAGACCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCCCTACCATGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp TTCGCTTTGCAGGGGACGTTCTGTCCTGTGTCTGCAGCACTGCTGACCGGCATGGGCCTGTGCTGTCCCTaGGGCCAAGAAGAACTGGCT +
Preference number: 4 (lower is better)
Translates to: FALQGTFCPVSAALLTGMGLCCP*GQEELA
Trigger: AGCCAGTTCTTCTTGGCCTCAGGGACAGCACAGGCC...CATGCCGGTCAGCAGTGCTGCAGACACAGGACAGAACGTCCCCTGCAAAGCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR TCA 90 bp TACGTTCTGGGAGGCAGGCATCCCTTCTCGGGGGCTGGCAAACTCAAGACCTTTTGTCTGCAGCACTGCTaGCCGGCATGGGACGACCAG +
Preference number: 4 (lower is better)
Translates to: YVLGGRHPFSGAGKLKTFCLQHC*PAWDDQ
Trigger: CTGGTCGTCCCATGCCGGTCAGCAGTGCTGCAGACA...AAAGGTCTTGAGTTTGCCAGCCCCCGAGAAGGGATGCCTGCCTCCCAGAACGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR GCA 90 bp ACCACCTCCTGTCCTTCATCCAGCAGCCCTGCAGCGCCACTCAGGATGCGGGTGTCCAGGACAGTTGCTTaGCTTTGGCGTGGTACACGT +
Preference number: 4 (lower is better)
Translates to: TTSCPSSSSPAAPLRMRVSRTVA*LWRGTR
Trigger: ACGTGTACCACGCCAAAGGCAAGCAACTGTCCTGGA...CACCCGCATCCTGAGTGGCGCTGCAGGGCTGCTGGATGAAGGACAGGAGGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR GCA 90 bp CCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAAGAACTCGGAGGCCTTaGACAGGGTCTCTCGGACAT +
Preference number: 4 (lower is better)
Translates to: PLGRVGETAGFHIWQGRARTRRP*TGSLGH
Trigger: ATGTCCGAGAGACCCTGTGCAAGGCCTCCGAGTTCT...TGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR GCA 90 bp GCAGGCATCCCTTCTCGGGGGCTGGCAAACTCAAGACCTTTGGGAGTGGGGGACAGAACTCGGAGGCCTTaGACAGGGTCTCTCGGACAT +
Preference number: 4 (lower is better)
Translates to: AGIPSRGLANSRPLGVGDRTRRP*TGSLGH
Trigger: ATGTCCGAGAGACCCTGTGCAAGGCCTCCGAGTTCT...GTCCCCCACTCCCAAAGGTCTTGAGTTTGCCAGCCCCCGAGAAGGGATGCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp GTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCTGTGGGTCGATCCTGGAGGACTaGTACTTGATGAGCATGTTG +
Preference number: 4 (lower is better)
Translates to: VGPRGTLLDGTASPGGCGSILED*YLMSML
Trigger: CAACATGCTCATCAAGTACCAGTCCTCCAGGATCGA...CCCACAGCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTGCAGGGTTTCACATTTaGCAGGGCAGGGCAGAACGG +
Preference number: 4 (lower is better)
Translates to: GGSETPLGRVGETAGFHIAGFHI*QGRAER
Trigger: CCGTTCTGCCCTGCCCTGCCAAATGTGAAACCCTGC...AATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp AGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCCCCTTTTTCCTGGCTTaGGGTTTTGGAATGTCGAAG +
Preference number: 4 (lower is better)
Translates to: RGCGSLTAPGRGRHAEGPPFFLA*GFGMSK
Trigger: CTTCGACATTCCAAAACCCCAAGCCAGGAAAAAGGG...GGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp CGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGACGTGGATGTACCTCTTGGGTTaGAAAGGACCCATTGACAAC +
Preference number: 4 (lower is better)
Translates to: RGAACPVPVLGNGLGRTWMYLLG*KGPIDN
Trigger: GTTGTCAATGGGTCCTTTCCAACCCAAGAGGTACAT...CCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp TGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGAACAAATGTACCTCTTaGGTTGGAAAGGACCCATTG +
Preference number: 4 (lower is better)
Translates to: CGSLTAPGRGRHAEGPVRNKCTS*VGKDPL
Trigger: CAATGGGTCCTTTCCAACCCAAGAGGTACATTTGTT...CCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp TACGTTCTGGGAGGCAGGCATCCCTTCTCGGGGGCTGGCAAACTCAAGACCTTTGTAGGCGCCATTTTCTaGCGGCTGCCACCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: YVLGGRHPFSGAGKLKTFVGAIF*RLPPPP
Trigger: TGGCGGAGGTGGCAGCCGCCAGAAAATGGCGCCTAC...AAAGGTCTTGAGTTTGCCAGCCCCCGAGAAGGGATGCCTGCCTCCCAGAACGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR GCA 90 bp GATAAGAAAAAGAAACTCCGGCAGCCCAGCACCACATCCAAGCCTGGTGTTCCCCGGCCGAGCACCAGCTaGAGCTGCGCCACGTTCATG +
Preference number: 4 (lower is better)
Translates to: DKKKKLRQPSTTSKPGVPRPSTS*SCATFM
Trigger: CATGAACGTGGCGCAGCTGCAGCTGGTGCTCGGCCG...GGGAACACCAGGCTTGGATGTGGTGCTGGGCTGCCGGAGTTTCTTTTTCTTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR GCA 90 bp TACGTTCTGGGAGGCAGGCATCCCTTCTCGGGGGCTGGCAAACTCAAGACCTTTCATGGCCTTGGGCCTTaGCTGATTACTGCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: YVLGGRHPFSGAGKLKTFHGLGP*LITAPG
Trigger: GCCTGGGGCAGTAATCAGGCAAGGCCCAAGGCCATG...AAAGGTCTTGAGTTTGCCAGCCCCCGAGAAGGGATGCCTGCCTCCCAGAACGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp CCCAAGAGGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTCCTGGCTTGGGGTTTTaGAATGTCGAAGTTCATGCC +
Preference number: 4 (lower is better)
Translates to: PKRRLRDTFGEGGGDSRVPGLGF*NVEVHA
Trigger: GGCATGAACTTCGACATTCCAAAACCCCAAGCCAGG...AACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCCTCTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GGGGCCATGGTAGGGCCCTTGGCAGTCTTGGGAGGTGCCAAGGCTGGGTCTGGACCCTTTTTCCTGGCTTaGGGTTTTGGAATGTCGAAG +
Preference number: 4 (lower is better)
Translates to: GAMVGPLAVLGGAKAGSGPFFLA*GFGMSK
Trigger: CTTCGACATTCCAAAACCCCAAGCCAGGAAAAAGGG...TCCAGACCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCCCTACCATGGCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp GTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCTGTGGGATGTACCTCTTGGGTTaGAAAGGACCCATTGACAAC +
Preference number: 4 (lower is better)
Translates to: VGPRGTLLDGTASPGGCGMYLLG*KGPIDN
Trigger: GTTGTCAATGGGTCCTTTCCAACCCAAGAGGTACAT...CCCACAGCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp CGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGACGTGGAACAAATGTACCTCTTaGGTTGGAAAGGACCCATTG +
Preference number: 4 (lower is better)
Translates to: RGAACPVPVLGNGLGRTWNKCTS*VGKDPL
Trigger: CAATGGGTCCTTTCCAACCCAAGAGGTACATTTGTT...CCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR TCA 90 bp ACGTTCTGTCCTGTGTCTGCAGCACTGCTGACCGGCATGGGACGACCAGCGGTCAGGTCGTGGCCTCTGTaGAGTTCCCCAACAAATAGT +
Preference number: 4 (lower is better)
Translates to: TFCPVSAALLTGMGRPAVRSWPL*SSPTNS
Trigger: ACTATTTGTTGGGGAACTTCACAGAGGCCACGACCT...GACCGCTGGTCGTCCCATGCCGGTCAGCAGTGCTGCAGACACAGGACAGAACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR GCA 90 bp TTCGCTTTGCAGGGGACGTTCTGTCCTGTGTCTGCAGCACTGCTGACCGGCATGGGTAGAAGTAGGCGTTaGCCAGCTGGCTGTAGATGG +
Preference number: 4 (lower is better)
Translates to: FALQGTFCPVSAALLTGMGRSRR*PAGCRW
Trigger: CCATCTACAGCCAGCTGGGCAACGCCTACTTCTACC...CATGCCGGTCAGCAGTGCTGCAGACACAGGACAGAACGTCCCCTGCAAAGCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR GCA 90 bp TTCGCTTTGCAGGGGACGTTCTGTCCTGTGTCTGCAGCACTGCTGACCGGCATGGCGTTCCAGGACAGTTaGTTGCCTTTGGCGTGGTAC +
Preference number: 4 (lower is better)
Translates to: FALQGTFCPVSAALLTGMAFQDS*LPLAWY
Trigger: GTACCACGCCAAAGGCAAGCAACTGTCCTGGAACGC...CATGCCGGTCAGCAGTGCTGCAGACACAGGACAGAACGTCCCCTGCAAAGCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp CCCAAGAGGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCGATCCTGGAGGACTaGTACTTGATGAGCATGTTG +
Preference number: 4 (lower is better)
Translates to: PKRRLRDTFGEGGGDSRVSILED*YLMSML
Trigger: CAACATGCTCATCAAGTACCAGTCCTCCAGGATCGA...AACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCCTCTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp CCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTTGGCAGGGCAGGGCACCTGGCTTGGGGTTTTaGAATGTCGAAGTTCATGCC +
Preference number: 4 (lower is better)
Translates to: PLGRVGETAGFHIWQGRAPGLGF*NVEVHA
Trigger: GGCATGAACTTCGACATTCCAAAACCCCAAGCCAGG...TGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp AACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGATGTACCTCTTGGGTTaGAAAGGACCCATTGACAAC +
Preference number: 4 (lower is better)
Translates to: NGKGLGERMRESDSTRSGMYLLG*KGPIDN
Trigger: GTTGTCAATGGGTCCTTTCCAACCCAAGAGGTACAT...CCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp AGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCAACAAATGTACCTCTTaGGTTGGAAAGGACCCATTG +
Preference number: 4 (lower is better)
Translates to: RGCGSLTAPGRGRHAEGPNKCTS*VGKDPL
Trigger: CAATGGGTCCTTTCCAACCCAAGAGGTACATTTGTT...GGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp TGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGACGTGGCTAACAAATGTACCTCTTaGGTTGGAAAGGACCCATTG +
Preference number: 4 (lower is better)
Translates to: WGCMPSACPRQWPREDVANKCTS*VGKDPL
Trigger: CAATGGGTCCTTTCCAACCCAAGAGGTACATTTGTT...AGCCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp CAGGTACGTTCTGGGAGGCAGGCATCCCTTCTCGGGGGCTGGCAAACTCAAGACCCAGCTGGCTGTAGATaGCACTCAGTGTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: QVRSGRQASLLGGWQTQDPAGCR*HSVSSG
Trigger: ACCTGAAGACACTGAGTGCCATCTACAGCCAGCTGG...GTCTTGAGTTTGCCAGCCCCCGAGAAGGGATGCCTGCCTCCCAGAACGTACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp GGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTACAGTTGCTTGCCTTTaGCGTGGTACACGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: GGSETPLGRVGETAGFHITVACL*RGTRSR
Trigger: TCGGGAACGTGTACCACGCCAAAGGCAAGCAACTGT...AATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CCA 90 bp TTCGCTTTGCAGGGGACGTTCTGTCCTGTGTCTGCAGCACTGCTGACCGGCATGTGCTTGCCTTTGGCGTaGTACACGTTCCCGATGTTG +
Preference number: 4 (lower is better)
Translates to: FALQGTFCPVSAALLTGMCLPLA*YTFPML
Trigger: CAACATCGGGAACGTGTACCACGCCAAAGGCAAGCA...CATGCCGGTCAGCAGTGCTGCAGACACAGGACAGAACGTCCCCTGCAAAGCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp ATTAGTCTTTTCGCTTTGCAGGGGACGTTCTGTCCTGTGTCTGCAGCACTGCTGGCCAGGCGCTCCTTGTaGAAGGTCGTGGCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: ISLFALQGTFCPVSAALLARRSL*KVVASV
Trigger: CACAGAGGCCACGACCTTCCACAAGGAGCGCCTGGC...CAGCAGTGCTGCAGACACAGGACAGAACGTCCCCTGCAAAGCGAAAAGACTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp GGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTTCGATCCTGGAGGACTaGTACTTGATGAGCATGTTG +
Preference number: 4 (lower is better)
Translates to: GGSETPLGRVGETAGFHISILED*YLMSML
Trigger: CAACATGCTCATCAAGTACCAGTCCTCCAGGATCGA...AATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CCA 90 bp TACGTTCTGGGAGGCAGGCATCCCTTCTCGGGGGCTGGCAAACTCAAGACCTTTACAGTTGCTTGCCTTTaGCGTGGTACACGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: YVLGGRHPFSGAGKLKTFTVACL*RGTRSR
Trigger: TCGGGAACGTGTACCACGCCAAAGGCAAGCAACTGT...AAAGGTCTTGAGTTTGCCAGCCCCCGAGAAGGGATGCCTGCCTCCCAGAACGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616132.4
3UTR CAA 72 bp AGGACCAGGCCCTGCCCTTTTTCCTGGCTTGGGGTTTaGGAATGTCGAAGTTCATGCCCAGCCATTCCCTCT +
Preference number: 4 (lower is better)
Translates to: RTRPCPFSWLGV*ECRSSCPAIPS
Trigger: AGAGGGAATGGCTGGGCATGAACTTCGACATTCCAAAACCCCAAGCCAGGAAAAAGGGCAGGGCCTGGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp ATTAGTCTTTTCGCTTTGCAGGGGACGTTCTGTCCTGTGTCTGCAGCACTGCTGGGCCCTCCTCTCGGCTaGCTTGTCTCCAAACTCCTT +
Preference number: 4 (lower is better)
Translates to: ISLFALQGTFCPVSAALLGPPLG*LVSKLL
Trigger: AAGGAGTTTGGAGACAAGGCAGCCGAGAGGAGGGCC...CAGCAGTGCTGCAGACACAGGACAGAACGTCCCCTGCAAAGCGAAAAGACTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CCA 90 bp GGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTATGTACCTCTTGGGTTaGAAAGGACCCATTGACAAC +
Preference number: 4 (lower is better)
Translates to: GGSETPLGRVGETAGFHIMYLLG*KGPIDN
Trigger: GTTGTCAATGGGTCCTTTCCAACCCAAGAGGTACAT...AATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR GCA 90 bp ATTAGTCTTTTCGCTTTGCAGGGGACGTTCTGTCCTGTGTCTGCAGCACTGCTGGTTCTGTCCTGTGTCTaGAGCACTGCTGACCGGCAT +
Preference number: 4 (lower is better)
Translates to: ISLFALQGTFCPVSAALLVLSCV*STADRH
Trigger: ATGCCGGTCAGCAGTGCTGCAGACACAGGACAGAAC...CAGCAGTGCTGCAGACACAGGACAGAACGTCCCCTGCAAAGCGAAAAGACTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS GCA 90 bp CCCGCGCCGTGGCCGTCCGCCCCCTGCCCGCCCTGCTGTCCTCCCTaGTGTCCGCCCTGCTGTCCGCCTGTCCGTCCGCGCCTCGTTCGC +
Preference number: 5 (lower is better)
Translates to: PAPWPSAPCPPCCPP*CPPCCPPVRPRLVR
Trigger: GCGAACGAGGCGCGGACGGACAGGCGGACAGCAGGGCGGACAGCAGGGAGGACAGCAGGGCGGGCAGGGGGCGGACGGCCACGGCGCGGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440944.6
ENST00000616132.4
CDS GCA 90 bp CCGTCCGCCCCCTGCCCGCCCTGCTGTCCTCCCTGCTGTCCGCCCTaGTGTCCGCCTGTCCGTCCGCGCCTCGTTCGCCCGTCCTCCCCC +
Preference number: 5 (lower is better)
Translates to: PSAPCPPCCPPCCPP*CPPVRPRLVRPSSP
Trigger: GGGGGAGGACGGGCGAACGAGGCGCGGACGGACAGGCGGACAGCAGGGCGGACAGCAGGGAGGACAGCAGGGCGGGCAGGGGGCGGACGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440944.6
ENST00000616132.4
CDS CCA 90 bp GTGCGTGGCACGTGCACCCGGACGTCGGCGCTGTCCAGCGGGGAGTaGCTGCCCTCCCGGGGCCTCCTCTCAGCGTCCGGGCCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: VRGTCTRTSALSSGE*LPSRGLLSASGPSW
Trigger: CCAGGAAGGCCCGGACGCTGAGAGGAGGCCCCGGGAGGGCAGCCACTCCCCGCTGGACAGCGCCGACGTCCGGGTGCACGTGCCACGCAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS CCA 90 bp GGCTCCTGGGGCTCGCCGTGGCCTCGGAGGTGCCCTGCATTGCTGTaGGTGATTCGCAGCCCCGGCAGGCTGCCCACGCTGGCCCGCTGG +
Preference number: 5 (lower is better)
Translates to: GSWGSPWPRRCPALL*VIRSPGRLPTLARW
Trigger: CCAGCGGGCCAGCGTGGGCAGCCTGCCGGGGCTGCGAATCACCCACAGCAATGCAGGGCACCTCCGAGGCCACGGCGAGCCCCAGGAGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS GCA 90 bp TCTGAGGCTGCCGGGCTGGTCAGGCGGCCGAGCACCAGCTGCAGCTaGGCCACGTTCATGCGGGCCGTGAGCTCCCCATGGCGGTCCCCG +
Preference number: 5 (lower is better)
Translates to: SEAAGLVRRPSTSCS*ATFMRAVSSPWRSP
Trigger: CGGGGACCGCCATGGGGAGCTCACGGCCCGCATGAACGTGGCGCAGCTGCAGCTGGTGCTCGGCCGCCTGACCAGCCCGGCAGCCTCAGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS GCA 90 bp GTGGCACGTGCACCCGGACGTCGGCGCTGTCCAGCGGGGAGTGGCTaGCCTCCCGGGGCCTCCTCTCAGCGTCCGGGCCTTCCTGGTACT +
Preference number: 5 (lower is better)
Translates to: VARAPGRRRCPAGSG*PPGASSQRPGLPGT
Trigger: AGTACCAGGAAGGCCCGGACGCTGAGAGGAGGCCCCGGGAGGGCAGCCACTCCCCGCTGGACAGCGCCGACGTCCGGGTGCACGTGCCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS TCA 90 bp GGGTCTGGCCCCCTGGGCCTCATAGCCGGCCAGGTCAGGCTTCTCTaGGGCTGCCGGGCTGGTCAGGCGGCCGAGCACCAGCTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: GSGPLGLIAGQVRLL*GCRAGQAAEHQLQL
Trigger: CAGCTGCAGCTGGTGCTCGGCCGCCTGACCAGCCCGGCAGCCTCAGAGAAGCCTGACCTGGCCGGCTATGAGGCCCAGGGGGCCAGACCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS GCA 90 bp GGCTTCTCTGAGGCTGCCGGGCTGGTCAGGCGGCCGAGCACCAGCTaGAGCTGCGCCACGTTCATGCGGGCCGTGAGCTCCCCATGGCGG +
Preference number: 5 (lower is better)
Translates to: GFSEAAGLVRRPSTS*SCATFMRAVSSPWR
Trigger: CCGCCATGGGGAGCTCACGGCCCGCATGAACGTGGCGCAGCTGCAGCTGGTGCTCGGCCGCCTGACCAGCCCGGCAGCCTCAGAGAAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS-3UTR CAA 90 bp GGCCATGGGGGCCAGCCCGGGATGGAAGCACGCCCTCCCACCACGGGCAGCTTGGGGCCCTTGGCAGTCTaGGGAGGTGCCAAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: GHGGQPGMEARPPTTGSLGPLAV*GGAKAG
Trigger: CCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCCC...CAAGCTGCCCGTGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCCCATGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS CCA 90 bp GGCAGGCTGCCCACGCTGGCCCGCTGGTCGTCCAGCCGGCGGCTCTaGGAGCTGGCGATGAGGTCGAAGAATTCCTCGGTCTGGGGCGAG +
Preference number: 5 (lower is better)
Translates to: GRLPTLARWSSSRRL*ELAMRSKNSSVWGE
Trigger: CTCGCCCCAGACCGAGGAATTCTTCGACCTCATCGCCAGCTCCCAGAGCCGCCGGCTGGACGACCAGCGGGCCAGCGTGGGCAGCCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp GGCCATGGGGGCCAGCCCGGGATGGAAGCACGCCCTCCCACCACGGGCAGCTTGCAGAACGGGAAGGGCTaGGGGGAGAGGATGCGGGAG +
Preference number: 5 (lower is better)
Translates to: GHGGQPGMEARPPTTGSLQNGKG*GERMRE
Trigger: CTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTTCTG...CAAGCTGCCCGTGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCCCATGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp GGCCATGGGGGCCAGCCCGGGATGGAAGCACGCCCTCCCACCACGGGCAGCTTGAACATGGCCCTGTCCTaGGTGGCCCCAAGAGGCGGC +
Preference number: 5 (lower is better)
Translates to: GHGGQPGMEARPPTTGSLNMALS*VAPRGG
Trigger: GCCGCCTCTTGGGGCCACCAAGGACAGGGCCATGTT...CAAGCTGCCCGTGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCCCATGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS TCA 90 bp GGCGGCCGAGCACCAGCTGCAGCTGCGCCACGTTCATGCGGGCCGTaGGCTCCCCATGGCGGTCCCCGATCTCCTGGGAGATCTGCAGGT +
Preference number: 5 (lower is better)
Translates to: GGRAPAAAAPRSCGP*APHGGPRSPGRSAG
Trigger: ACCTGCAGATCTCCCAGGAGATCGGGGACCGCCATGGGGAGCTCACGGCCCGCATGAACGTGGCGCAGCTGCAGCTGGTGCTCGGCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS-3UTR CAA 90 bp TGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCAGAACGGGAAGGGCTaGGGGGAGAGGATGCGGGAG +
Preference number: 5 (lower is better)
Translates to: CGSLTAPGRGRHAEGPVRQNGKG*GERMRE
Trigger: CTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTTCTG...CCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp GAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGCGGGGGCCTTCTGTGGTaGCTGACCTCTGGCCGGGGA +
Preference number: 5 (lower is better)
Translates to: EDVAVTVRPASRSGGRVGGGLLW*LTSGRG
Trigger: TCCCCGGCCAGAGGTCAGCAACCACAGAAGGCCCCC...GCCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp ATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGGGCCCTTGGCAGTCTaGGGAGGTGCCAAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: MRESDSTRSGPTCRRPRPGPLAV*GGAKAG
Trigger: CCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCCC...CGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp GAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCCTGCGCCATGGTAGGGCCCTaGGCAGTCTTGGGAGGTGCC +
Preference number: 5 (lower is better)
Translates to: ESDSTRSGPTCRRPRPACAMVGP*AVLGGA
Trigger: GGCACCTCCCAAGACTGCCAAGGGCCCTACCATGGC...GCAGGCCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp TGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGGCGCCATACACCACCTaGCACACGGCCTTCTCCGCC +
Preference number: 5 (lower is better)
Translates to: CGSLTAPGRGRHAEGPVRAPYTT*HTAFSA
Trigger: GGCGGAGAAGGCCGTGTGCAAGGTGGTGTATGGCGC...CCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354753.7
CDS-3UTR CAA 90 bp CCCACAGCCCAGCCCAGCCCAGCCCAGCCCAGCCCTCTGGCTGATGCCCTCTCGATGGCCAGGCGCTCCTaGTGGAAGGTCGTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: PTAQPSPAQPSPLADALSMARRS*WKVVAS
Trigger: AGAGGCCACGACCTTCCACAAGGAGCGCCTGGCCAT...CGAGAGGGCATCAGCCAGAGGGCTGGGCTGGGCTGGGCTGGGCTGGGCTGTGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CAA 90 bp ACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCAGCCTCTGCGTCCTCTaGGGTCTGGCCCCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: TGRAWGRGCGSLTAPGRGSLCVL*GLAPWA
Trigger: GGCCCAGGGGGCCAGACCCAAGAGGACGCAGAGGCT...GCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS TCA 90 bp CTGGAACTCACCCTGGGCCTCATAGCCGGCCAGGTCAGGCTTCTCTaGGGCTGCCGGGCTGGTCAGGCGGCCGAGCACCAGCTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: LELTLGLIAGQVRLL*GCRAGQAAEHQLQL
Trigger: CAGCTGCAGCTGGTGCTCGGCCGCCTGACCAGCCCGGCAGCCTCAGAGAAGCCTGACCTGGCCGGCTATGAGGCCCAGGGTGAGTTCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS CCA 90 bp TGTAGGCGCCATTTTCTGGCGGCTGCCACCTCCGCCATGCTGGCCTaGCCTCGATCCCACCCCTCCGCAGCTCCTGATGCGGTCCGTGCC +
Preference number: 5 (lower is better)
Translates to: CRRHFLAAATSAMLA*PRSHPSAAPDAVRA
Trigger: GGCACGGACCGCATCAGGAGCTGCGGAGGGGTGGGATCGAGGCCAGGCCAGCATGGCGGAGGTGGCAGCCGCCAGAAAATGGCGCCTACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CAA 90 bp CGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGACGTGGCAGAACGGGAAGGGCTaGGGGGAGAGGATGCGGGAG +
Preference number: 5 (lower is better)
Translates to: RGAACPVPVLGNGLGRTWQNGKG*GERMRE
Trigger: CTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTTCTG...CCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp ATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGCAGAACGGGAAGGGCTaGGGGGAGAGGATGCGGGAG +
Preference number: 5 (lower is better)
Translates to: MRESDSTRSGPTCRRPRPQNGKG*GERMRE
Trigger: CTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTTCTG...CGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp GCCTCGGGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGAACATGGCCCTGTCCTaGGTGGCCCCAAGAGGCGGC +
Preference number: 5 (lower is better)
Translates to: ASGGRGCDCETGVQEWGQNMALS*VAPRGG
Trigger: GCCGCCTCTTGGGGCCACCAAGGACAGGGCCATGTT...CTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCCCGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp TGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGACGTGGCTGGGGGCCTTCTGTGGTaGCTGACCTCTGGCCGGGGA +
Preference number: 5 (lower is better)
Translates to: WGCMPSACPRQWPREDVAGGLLW*LTSGRG
Trigger: TCCCCGGCCAGAGGTCAGCAACCACAGAAGGCCCCC...AGCCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp ACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCGGGGGCCTTCTGTGGTaGCTGACCTCTGGCCGGGGA +
Preference number: 5 (lower is better)
Translates to: TGRAWGRGCGSLTAPGRGGGLLW*LTSGRG
Trigger: TCCCCGGCCAGAGGTCAGCAACCACAGAAGGCCCCC...GCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp GGGAGGCCGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGCCTAGGATCCCGAACTaGGTGCCCTGTGAGCCCCCT +
Preference number: 5 (lower is better)
Translates to: GRPWGCMPSACPRQWPREPRIPN*VPCEPP
Trigger: AGGGGGCTCACAGGGCACCAAGTTCGGGATCCTAGG...CTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACGGCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp GAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGCGCCATGGTAGGGCCCTaGGCAGTCTTGGGAGGTGCC +
Preference number: 5 (lower is better)
Translates to: EDVAVTVRPASRSGGRVGAMVGP*AVLGGA
Trigger: GGCACCTCCCAAGACTGCCAAGGGCCCTACCATGGC...GCCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp GGCCATGGGGGCCAGCCCGGGATGGAAGCACGCCCTCCCACCACGGGCAGCTTGCTTGTCTCCCTGCTCTaGGGCGATGCTCAGATGCCG +
Preference number: 5 (lower is better)
Translates to: GHGGQPGMEARPPTTGSLLVSLL*GDAQMP
Trigger: CGGCATCTGAGCATCGCCCAAGAGCAGGGAGACAAG...CAAGCTGCCCGTGGTGGGAGGGCGTGCTTCCATCCCGGGCTGGCCCCCATGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CAA 90 bp TGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGGGTCCTGCGTGGCGTTaGCGGCGTTCCAGGACAGTT +
Preference number: 5 (lower is better)
Translates to: CGSLTAPGRGRHAEGPVRGPAWR*RRSRTV
Trigger: AACTGTCCTGGAACGCCGCAAACGCCACGCAGGACC...CCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CAA 90 bp GGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGCCAGCCTCCCCAGCCTaGGCCTGGAACACTTCCCAG +
Preference number: 5 (lower is better)
Translates to: GKGLGERMRESDSTRSGPPASPA*AWNTSQ
Trigger: CTGGGAAGTGTTCCAGGCCAAGGCTGGGGAGGCTGG...CGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392944.5
CDS-3UTR CAA 90 bp ACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCAGCCACGCTGGGTGCTaGGCCACACAGAGCGCAGGC +
Preference number: 5 (lower is better)
Translates to: TGRAWGRGCGSLTAPGRGSHAGC*ATQSAG
Trigger: GCCTGCGCTCTGTGTGGCCAAGCACCCAGCGTGGCT...GCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429455.5
CDS GCA 90 bp CTCGCCTCCCCAACCTTGTCTCCCTGCTCTTGGGCGATGCTCAGATaGCGCTGGCAGCAGACGGCAGCCTCGTCGAAGCGCCCCAGGACC +
Preference number: 5 (lower is better)
Translates to: LASPTLSPCSWAMLR*RWQQTAASSKRPRT
Trigger: GGTCCTGGGGCGCTTCGACGAGGCTGCCGTCTGCTGCCAGCGGCATCTGAGCATCGCCCAAGAGCAGGGAGACAAGGTTGGGGAGGCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS GCA 90 bp AACTCGGAGGCCTTGCACAGGGTCTCTCGGACATCGGGCGGCAGGTaGCCGGGGTCCTGCGTGGCGTTTGCGGCGTTCCAGGACAGTTGC +
Preference number: 5 (lower is better)
Translates to: NSEALHRVSRTSGGR*PGSCVAFAAFQDSC
Trigger: GCAACTGTCCTGGAACGCCGCAAACGCCACGCAGGACCCCGGGCACCTGCCGCCCGATGTCCGAGAGACCCTGTGCAAGGCCTCCGAGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS CCA 90 bp TGGCTTGTAGGCGCCATTTTCTGGCGGCTGCCACCTCCGCCATGCTaGCCTGGCCTCGATCCCACCCCTCCGCAGCTCCTGATGCGGTCC +
Preference number: 5 (lower is better)
Translates to: WLVGAIFWRLPPPPC*PGLDPTPPQLLMRS
Trigger: GGACCGCATCAGGAGCTGCGGAGGGGTGGGATCGAGGCCAGGCCAGCATGGCGGAGGTGGCAGCCGCCAGAAAATGGCGCCTACAAGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CAA 90 bp CGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGACGTGGCGGAGGTGCCCTGCATaGCTGTGGGTGATTCGCAGC +
Preference number: 5 (lower is better)
Translates to: RGAACPVPVLGNGLGRTWRRCPA*LWVIRS
Trigger: GCTGCGAATCACCCACAGCAATGCAGGGCACCTCCG...CCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp GCCTCGGGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGCGGAGGTGCCCTGCATaGCTGTGGGTGATTCGCAGC +
Preference number: 5 (lower is better)
Translates to: ASGGRGCDCETGVQEWGQRRCPA*LWVIRS
Trigger: GCTGCGAATCACCCACAGCAATGCAGGGCACCTCCG...CTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCCCGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp GAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGCCGGAGGTGCCCTGCATaGCTGTGGGTGATTCGCAGC +
Preference number: 5 (lower is better)
Translates to: EDVAVTVRPASRSGGRVGRRCPA*LWVIRS
Trigger: GCTGCGAATCACCCACAGCAATGCAGGGCACCTCCG...GCCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp GGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGGGCTCAGAGACACCTTaGGGGAGGGTGGGGGAGACA +
Preference number: 5 (lower is better)
Translates to: GKGLGERMRESDSTRSGPGSETP*GRVGET
Trigger: TGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCC...CGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp AACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGGGGCCCTTGGCAGTCTaGGGAGGTGCCAAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: NGKGLGERMRESDSTRSGGPLAV*GGAKAG
Trigger: CCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCCC...CCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTT
68% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp ACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCGCCATGGTAGGGCCCTaGGCAGTCTTGGGAGGTGCC +
Preference number: 5 (lower is better)
Translates to: TGRAWGRGCGSLTAPGRGAMVGP*AVLGGA
Trigger: GGCACCTCCCAAGACTGCCAAGGGCCCTACCATGGC...GCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp GGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCGCCATGGTAGGGCCCTaGGCAGTCTTGGGAGGTGCC +
Preference number: 5 (lower is better)
Translates to: GLGERMRESDSTRSGPTCAMVGP*AVLGGA
Trigger: GGCACCTCCCAAGACTGCCAAGGGCCCTACCATGGC...GCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp AGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCTTGAAGTCGCCCGCCTaGCACAGACGCTCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: RGCGSLTAPGRGRHAEGPLKSPA*HRRSPS
Trigger: GGAGGGCGAGCGTCTGTGCAAGGCGGGCGACTTCAA...GGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CAA 90 bp GGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGAGGTTTCCACTGGCCTaGGCCTCCCCCATGCGGTCA +
Preference number: 5 (lower is better)
Translates to: GGRGCDCETGVQEWGQGGRFPLA*ASPMRS
Trigger: TGACCGCATGGGGGAGGCCAAGGCCAGTGGAAACCT...CCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CAA 90 bp CTCCCACAGCCCAGCCCAGCCCAGCCCAGCCCAGCCCTCTGGCTGATGCCCTCTCTTGTCTCCCTGCTCTaGGGCGATGCTCAGATGCCG +
Preference number: 5 (lower is better)
Translates to: LPQPSPAQPSPALWLMPSLVSLL*GDAQMP
Trigger: CGGCATCTGAGCATCGCCCAAGAGCAGGGAGACAAG...AGAGGGCATCAGCCAGAGGGCTGGGCTGGGCTGGGCTGGGCTGGGCTGTGGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CAA 90 bp ACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCTCGCCTCCCCAACCTaGTCTCCCTGCTCTTGGGCG +
Preference number: 5 (lower is better)
Translates to: TGRAWGRGCGSLTAPGRGLASPT*SPCSWA
Trigger: CGCCCAAGAGCAGGGAGACAAGGTTGGGGAGGCGAG...GCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CAA 90 bp GGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCTCGCCTCCCCAACCTaGTCTCCCTGCTCTTGGGCG +
Preference number: 5 (lower is better)
Translates to: GLGERMRESDSTRSGPTCLASPT*SPCSWA
Trigger: CGCCCAAGAGCAGGGAGACAAGGTTGGGGAGGCGAG...GCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS TCA 90 bp CGGTGCCCACCTGCACAGCAGCCTCAAAGAAGGCCACGCCTGTCTTaGAGTCGCCCGCCTTGCACAGACGCTCGCCCTCCAGCGCCAGCT +
Preference number: 5 (lower is better)
Translates to: RCPPAQQPQRRPRLS*SRPPCTDARPPAPA
Trigger: AGCTGGCGCTGGAGGGCGAGCGTCTGTGCAAGGCGGGCGACTTCAAGACAGGCGTGGCCTTCTTTGAGGCTGCTGTGCAGGTGGGCACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS GCA 90 bp TTGCACAGGGTCTCTCGGACATCGGGCGGCAGGTGCCCGGGGTCCTaGGTGGCGTTTGCGGCGTTCCAGGACAGTTGCTTGCCTTTGGCG +
Preference number: 5 (lower is better)
Translates to: LHRVSRTSGGRCPGS*VAFAAFQDSCLPLA
Trigger: CGCCAAAGGCAAGCAACTGTCCTGGAACGCCGCAAACGCCACGCAGGACCCCGGGCACCTGCCGCCCGATGTCCGAGAGACCCTGTGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS GCA 90 bp AACTGGCTTGTAGGCGCCATTTTCTGGCGGCTGCCACCTCCGCCATaGTGGCCTGGCCTCGATCCCACCCCTCCGCAGCTCCTGATGCGG +
Preference number: 5 (lower is better)
Translates to: NWLVGAIFWRLPPPP*WPGLDPTPPQLLMR
Trigger: CCGCATCAGGAGCTGCGGAGGGGTGGGATCGAGGCCAGGCCAGCATGGCGGAGGTGGCAGCCGCCAGAAAATGGCGCCTACAAGCCAGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS CCA 90 bp ACAGGGTCTCTCGGACATCGGGCGGCAGGTGCCCGGGGTCCTGCGTaGCGTTTGCGGCGTTCCAGGACAGTTGCTTGCCTTTGGCGTGGT +
Preference number: 5 (lower is better)
Translates to: TGSLGHRAAGARGPA*RLRRSRTVACLWRG
Trigger: ACCACGCCAAAGGCAAGCAACTGTCCTGGAACGCCGCAAACGCCACGCAGGACCCCGGGCACCTGCCGCCCGATGTCCGAGAGACCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS-3UTR CAA 90 bp CCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAAGCCTCTGCGTCCTCTaGGGTCTGGCCCCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: PLGRVGETAGFHIWQGRASLCVL*GLAPWA
Trigger: GGCCCAGGGGGCCAGACCCAAGAGGACGCAGAGGCT...TGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS TCA 90 bp GCGAGGTCCACCCGCTGCTCGTCCATGCGCTTAGCCTGCACCCTCTaGATGAGGCTGAAGAAGTCCTCGTCCGGCATGGTAGGGCCCCGG +
Preference number: 5 (lower is better)
Translates to: ARSTRCSSMRLACTL*MRLKKSSSGMVGPR
Trigger: CCGGGGCCCTACCATGCCGGACGAGGACTTCTTCAGCCTCATTCAGAGGGTGCAGGCTAAGCGCATGGACGAGCAGCGGGTGGACCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS GCA 90 bp CTCTCGGACATCGGGCGGCAGGTGCCCGGGGTCCTGCGTGGCGTTTaGGGCGTTCCAGGACAGTTGCTTGCCTTTGGCGTGGTACACGTT +
Preference number: 5 (lower is better)
Translates to: LSDIGRQVPGVLRGV*GVPGQLLAFGVVHV
Trigger: AACGTGTACCACGCCAAAGGCAAGCAACTGTCCTGGAACGCCGCAAACGCCACGCAGGACCCCGGGCACCTGCCGCCCGATGTCCGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS CCA 90 bp GTGGCCTCGGCAGCCCCGGCCTGGCCATCGTCCAGGGGACAACGCTaGTCGTCCATGCGGCTGCTCTGGAACTTGGTCAACAGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: VASAAPAWPSSRGQR*SSMRLLWNLVNRSK
Trigger: CTTTGACCTGTTGACCAAGTTCCAGAGCAGCCGCATGGACGACCAGCGTTGTCCCCTGGACGATGGCCAGGCCGGGGCTGCCGAGGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS CCA 90 bp ATGAGCATGTTGAAGAAGTCGTCCCCCGGCTCCTGGGGCTCGCCGTaGCCTCGGAGGTGCCCTGCATTGCTGTGGGTGATTCGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: MSMLKKSSPGSWGSP*PRRCPALLWVIRSP
Trigger: GGGGCTGCGAATCACCCACAGCAATGCAGGGCACCTCCGAGGCCACGGCGAGCCCCAGGAGCCGGGGGACGACTTCTTCAACATGCTCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp CTGAGAGTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCCGGAGGTGCCCTGCATaGCTGTGGGTGATTCGCAGC +
Preference number: 5 (lower is better)
Translates to: LRVGPRGTLLDGTASPGGRRCPA*LWVIRS
Trigger: GCTGCGAATCACCCACAGCAATGCAGGGCACCTCCG...GCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCACTCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp CTGAGAGTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCGGCTCAGAGACACCTTaGGGGAGGGTGGGGGAGACA +
Preference number: 5 (lower is better)
Translates to: LRVGPRGTLLDGTASPGGGSETP*GRVGET
Trigger: TGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCC...GCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCACTCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp CTGAGAGTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCCCTAGGATCCCGAACTaGGTGCCCTGTGAGCCCCCT +
Preference number: 5 (lower is better)
Translates to: LRVGPRGTLLDGTASPGGPRIPN*VPCEPP
Trigger: AGGGGGCTCACAGGGCACCAAGTTCGGGATCCTAGG...GCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCACTCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp GACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAGAACGGGAAGGGCTTGGGGGGGGCCCTTGGCAGTCTaGGGAGGTGCCAAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: DSRVSHLAGQGRTGRAWGGPLAV*GGAKAG
Trigger: CCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCCC...CCCCCAAGCCCTTCCCGTTCTGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTC
66% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp AACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGAAGGCCACGCCTGTCTaGAAGTCGCCCGCCTTGCAC +
Preference number: 5 (lower is better)
Translates to: NGKGLGERMRESDSTRSGKATPV*KSPALH
Trigger: GTGCAAGGCGGGCGACTTCAAGACAGGCGTGGCCTT...CCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CAA 90 bp GGGGCCATGGTAGGGCCCTTGGCAGTCTTGGGAGGTGCCAAGGCTGGGTCTGGAAAGGCCACGCCTGTCTaGAAGTCGCCCGCCTTGCAC +
Preference number: 5 (lower is better)
Translates to: GAMVGPLAVLGGAKAGSGKATPV*KSPALH
Trigger: GTGCAAGGCGGGCGACTTCAAGACAGGCGTGGCCTT...TCCAGACCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCCCTACCATGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CAA 90 bp ACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCAGCAGGAGGTCATGCTaGTGGTATTCCAGCGCCCGG +
Preference number: 5 (lower is better)
Translates to: TGRAWGRGCGSLTAPGRGSRRSC*WYSSAR
Trigger: CCGGGCGCTGGAATACCACAAGCATGACCTCCTGCT...GCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CAA 90 bp GTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCTGTGGGAGCAGGAGGTCATGCTaGTGGTATTCCAGCGCCCGG +
Preference number: 5 (lower is better)
Translates to: VGPRGTLLDGTASPGGCGSRRSC*WYSSAR
Trigger: CCGGGCGCTGGAATACCACAAGCATGACCTCCTGCT...CCCACAGCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CAA 90 bp GTCACCACGGTGGCCTCGCATGGCCTTGGGCCTTGCCTGATTACTGCCCCAGGCAGGTTTCCACTGGCCTaGGCCTCCCCCATGCGGTCA +
Preference number: 5 (lower is better)
Translates to: VTTVASHGLGPCLITAPGRFPLA*ASPMRS
Trigger: TGACCGCATGGGGGAGGCCAAGGCCAGTGGAAACCT...GCCTGGGGCAGTAATCAGGCAAGGCCCAAGGCCATGCGAGGCCACCGTGGTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CAA 90 bp AGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCCTTGTCTCCCTGCTCTaGGGCGATGCTCAGATGCCG +
Preference number: 5 (lower is better)
Translates to: RGCGSLTAPGRGRHAEGPLVSLL*GDAQMP
Trigger: CGGCATCTGAGCATCGCCCAAGAGCAGGGAGACAAG...GGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CAA 90 bp AGCCAGTGGGGCAACAGGCGACCACCTCCTGTCCTTCATCCAGCAGCCCTGCAGCTCGCCTCCCCAACCTaGTCTCCCTGCTCTTGGGCG +
Preference number: 5 (lower is better)
Translates to: SQWGNRRPPPVLHPAALQLASPT*SPCSWA
Trigger: CGCCCAAGAGCAGGGAGACAAGGTTGGGGAGGCGAG...CTGCAGGGCTGCTGGATGAAGGACAGGAGGTGGTCGCCTGTTGCCCCACTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CAA 90 bp GAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGCGGCGTTCCAGGACAGTaGCTTGCCTTTGGCGTGGTA +
Preference number: 5 (lower is better)
Translates to: EDVAVTVRPASRSGGRVGGVPGQ*LAFGVV
Trigger: TACCACGCCAAAGGCAAGCAACTGTCCTGGAACGCC...GCCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CAA 90 bp GGGGCCATGGTAGGGCCCTTGGCAGTCTTGGGAGGTGCCAAGGCTGGGTCTGGAGGTCCTGCGTGGCGTTaGCGGCGTTCCAGGACAGTT +
Preference number: 5 (lower is better)
Translates to: GAMVGPLAVLGGAKAGSGGPAWR*RRSRTV
Trigger: AACTGTCCTGGAACGCCGCAAACGCCACGCAGGACC...TCCAGACCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCCCTACCATGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CAA 90 bp TGGGGCAACAGGCGACCACCTCCTGTCCTTCATCCAGCAGCCCTGCAGCGCCACGGTCCTGCGTGGCGTTaGCGGCGTTCCAGGACAGTT +
Preference number: 5 (lower is better)
Translates to: WGNRRPPPVLHPAALQRHGPAWR*RRSRTV
Trigger: AACTGTCCTGGAACGCCGCAAACGCCACGCAGGACC...GTGGCGCTGCAGGGCTGCTGGATGAAGGACAGGAGGTGGTCGCCTGTTGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CAA 90 bp AACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGATGGCCAGGCGCTCCTaGTGGAAGGTCGTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: NGKGLGERMRESDSTRSGMARRS*WKVVAS
Trigger: AGAGGCCACGACCTTCCACAAGGAGCGCCTGGCCAT...CCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS GCA 90 bp GCCCGGGGTCCTGCGTGGCGTTTGCGGCGTTCCAGGACAGTTGCTTaGCTTTGGCGTGGTACACGTTCCCGATGTTGTAGAGGGCCCTCG +
Preference number: 5 (lower is better)
Translates to: ARGPAWRLRRSRTVA*LWRGTRSRCCRGPS
Trigger: CGAGGGCCCTCTACAACATCGGGAACGTGTACCACGCCAAAGGCAAGCAACTGTCCTGGAACGCCGCAAACGCCACGCAGGACCCCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS GCA 90 bp AGTTCCCCAACAAATAGTGGGTGTTGCCCAGGTTGCCGTAGGCCCTaGCCTGCGCCGCACGGTCGCCCAGCTCCTTCACCAGGGACAGGT +
Preference number: 5 (lower is better)
Translates to: SSPTNSGCCPGCRRP*PAPHGRPAPSPGTG
Trigger: ACCTGTCCCTGGTGAAGGAGCTGGGCGACCGTGCGGCGCAGGGCAGGGCCTACGGCAACCTGGGCAACACCCACTATTTGTTGGGGAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS CCA 90 bp GAAGTCCTCGTCCGGCATGGTAGGGCCCCGGGGCAGTACGTCAGGTaGCGGGCAGCGCTGGTCATCGATCCTGGAGGACTGGTACTTGAT +
Preference number: 5 (lower is better)
Translates to: EVLVRHGRAPGQYVR*RAALVIDPGGLVLD
Trigger: ATCAAGTACCAGTCCTCCAGGATCGATGACCAGCGCTGCCCGCCACCTGACGTACTGCCCCGGGGCCCTACCATGCCGGACGAGGACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS CCA 90 bp TCCCCAACCTTGTCTCCCTGCTCTTGGGCGATGCTCAGATGCCGCTaGCAGCAGACGGCAGCCTCGTCGAAGCGCCCCAGGACCTTGAGT +
Preference number: 5 (lower is better)
Translates to: SPTLSPCSWAMLRCR*QQTAASSKRPRTLS
Trigger: ACTCAAGGTCCTGGGGCGCTTCGACGAGGCTGCCGTCTGCTGCCAGCGGCATCTGAGCATCGCCCAAGAGCAGGGAGACAAGGTTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS CCA 90 bp GCTGTCCCTGAGGCCAAGAAGAACTGGCTTGTAGGCGCCATTTTCTaGCGGCTGCCACCTCCGCCATGCTGGCCTGGCCTCGATCCCACC +
Preference number: 5 (lower is better)
Translates to: AVPEAKKNWLVGAIF*RLPPPPCWPGLDPT
Trigger: GGTGGGATCGAGGCCAGGCCAGCATGGCGGAGGTGGCAGCCGCCAGAAAATGGCGCCTACAAGCCAGTTCTTCTTGGCCTCAGGGACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CAA 90 bp GGGAGGCCGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGCGGCTGCTCTGGAACTaGGTCAACAGGTCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: GRPWGCMPSACPRQWPRERLLWN*VNRSKK
Trigger: CTTCTTTGACCTGTTGACCAAGTTCCAGAGCAGCCG...CTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACGGCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp TGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGTACTTGATGAGCATGTaGAAGAAGTCGTCCCCCGGC +
Preference number: 5 (lower is better)
Translates to: CGSLTAPGRGRHAEGPVRYLMSM*KKSSPG
Trigger: GCCGGGGGACGACTTCTTCAACATGCTCATCAAGTA...CCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp GAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGCCTGCTACTTGATGAGCATGTaGAAGAAGTCGTCCCCCGGC +
Preference number: 5 (lower is better)
Translates to: ESDSTRSGPTCRRPRPACYLMSM*KKSSPG
Trigger: GCCGGGGGACGACTTCTTCAACATGCTCATCAAGTA...GCAGGCCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp GACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAGAACGGGAAGGGCTTGGGGGAACATGGCCCTGTCCTaGGTGGCCCCAAGAGGCGGC +
Preference number: 5 (lower is better)
Translates to: DSRVSHLAGQGRTGRAWGNMALS*VAPRGG
Trigger: GCCGCCTCTTGGGGCCACCAAGGACAGGGCCATGTT...CCCCCAAGCCCTTCCCGTTCTGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp TGGGGCAACAGGCGACCACCTCCTGTCCTTCATCCAGCAGCCCTGCAGCGCCACAGCAGGAGGTCATGCTaGTGGTATTCCAGCGCCCGG +
Preference number: 5 (lower is better)
Translates to: WGNRRPPPVLHPAALQRHSRRSC*WYSSAR
Trigger: CCGGGCGCTGGAATACCACAAGCATGACCTCCTGCT...GTGGCGCTGCAGGGCTGCTGGATGAAGGACAGGAGGTGGTCGCCTGTTGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CAA 90 bp CCCAAGAGGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTAGGTTTCCACTGGCCTaGGCCTCCCCCATGCGGTCA +
Preference number: 5 (lower is better)
Translates to: PKRRLRDTFGEGGGDSRVRFPLA*ASPMRS
Trigger: TGACCGCATGGGGGAGGCCAAGGCCAGTGGAAACCT...AACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCCTCTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CAA 90 bp AGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGACAGTTGCTTGCCTTaGGCGTGGTACACGTTCCCG +
Preference number: 5 (lower is better)
Translates to: RGCGSLTAPGRGRHAEGPDSCLP*AWYTFP
Trigger: CGGGAACGTGTACCACGCCAAAGGCAAGCAACTGTC...GGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CAA 90 bp GGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGTTCCAGGACAGTTGCTaGCCTTTGGCGTGGTACACG +
Preference number: 5 (lower is better)
Translates to: GGRGCDCETGVQEWGQGGFQDSC*PLAWYT
Trigger: CGTGTACCACGCCAAAGGCAAGCAACTGTCCTGGAA...CCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS CCA 90 bp GACTGGTACTTGATGAGCATGTTGAAGAAGTCGTCCCCCGGCTCCTaGGGCTCGCCGTGGCCTCGGAGGTGCCCTGCATTGCTGTGGGTG +
Preference number: 5 (lower is better)
Translates to: DWYLMSMLKKSSPGS*GSPWPRRCPALLWV
Trigger: CACCCACAGCAATGCAGGGCACCTCCGAGGCCACGGCGAGCCCCAGGAGCCGGGGGACGACTTCTTCAACATGCTCATCAAGTACCAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS CCA 90 bp GGTCCTGCGTGGCGTTTGCGGCGTTCCAGGACAGTTGCTTGCCTTTaGCGTGGTACACGTTCCCGATGTTGTAGAGGGCCCTCGCCTCCC +
Preference number: 5 (lower is better)
Translates to: GPAWRLRRSRTVACL*RGTRSRCCRGPSPP
Trigger: GGGAGGCGAGGGCCCTCTACAACATCGGGAACGTGTACCACGCCAAAGGCAAGCAACTGTCCTGGAACGCCGCAAACGCCACGCAGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS-3UTR CAA 90 bp GAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGCCGGCTGCTCTGGAACTaGGTCAACAGGTCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: EDVAVTVRPASRSGGRVGRLLWN*VNRSKK
Trigger: CTTCTTTGACCTGTTGACCAAGTTCCAGAGCAGCCG...GCCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp GGAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGCGGCTGCTCTGGAACTaGGTCAACAGGTCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: GGRGCDCETGVQEWGQGGRLLWN*VNRSKK
Trigger: CTTCTTTGACCTGTTGACCAAGTTCCAGAGCAGCCG...CCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp CGTGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGACGTGGTACTTGATGAGCATGTaGAAGAAGTCGTCCCCCGGC +
Preference number: 5 (lower is better)
Translates to: RGAACPVPVLGNGLGRTWYLMSM*KKSSPG
Trigger: GCCGGGGGACGACTTCTTCAACATGCTCATCAAGTA...CCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp GGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTAACATGGCCCTGTCCTaGGTGGCCCCAAGAGGCGGC +
Preference number: 5 (lower is better)
Translates to: GGSETPLGRVGETAGFHINMALS*VAPRGG
Trigger: GCCGCCTCTTGGGGCCACCAAGGACAGGGCCATGTT...AATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp TGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGTCCTGGCTTGGGGTTTaGGAATGTCGAAGTTCATGC +
Preference number: 5 (lower is better)
Translates to: CGSLTAPGRGRHAEGPVRSWLGV*ECRSSC
Trigger: GCATGAACTTCGACATTCCAAAACCCCAAGCCAGGA...CCGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp CCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTTGGCAGGGCAGGGCACCTAGGATCCCGAACTaGGTGCCCTGTGAGCCCCCT +
Preference number: 5 (lower is better)
Translates to: PLGRVGETAGFHIWQGRAPRIPN*VPCEPP
Trigger: AGGGGGCTCACAGGGCACCAAGTTCGGGATCCTAGG...TGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp GGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTTTGAAGTCGCCCGCCTaGCACAGACGCTCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: GGSETPLGRVGETAGFHILKSPA*HRRSPS
Trigger: GGAGGGCGAGCGTCTGTGCAAGGCGGGCGACTTCAA...AATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CAA 90 bp ACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCAAGCGCCCCAGGACCTaGAGTGTGTTTCCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: TGRAWGRGCGSLTAPGRGKRPRT*SVFPRF
Trigger: AAACCTGGGAAACACACTCAAGGTCCTGGGGCGCTT...GCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CAA 90 bp GTCACCACGGTGGCCTCGCATGGCCTTGGGCCTTGCCTGATTACTGCCCCAGGCGACAGTTGCTTGCCTTaGGCGTGGTACACGTTCCCG +
Preference number: 5 (lower is better)
Translates to: VTTVASHGLGPCLITAPGDSCLP*AWYTFP
Trigger: CGGGAACGTGTACCACGCCAAAGGCAAGCAACTGTC...GCCTGGGGCAGTAATCAGGCAAGGCCCAAGGCCATGCGAGGCCACCGTGGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CAA 90 bp GGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGGAGCTGCCGAGACAGTaGCAGCGTCTTCTTGTAGTA +
Preference number: 5 (lower is better)
Translates to: GKGLGERMRESDSTRSGPELPRQ*QRLLVV
Trigger: TACTACAAGAAGACGCTGCAACTGTCTCGGCAGCTC...CGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CAA 90 bp GCAGGCATCCCTTCTCGGGGGCTGGCAAACTCAAGACCTTTGGGAGTGGGGGACGCATGGCCTTGGGCCTaGCCTGATTACTGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: AGIPSRGLANSRPLGVGDAWPWA*PDYCPR
Trigger: CCTGGGGCAGTAATCAGGCAAGGCCCAAGGCCATGC...GTCCCCCACTCCCAAAGGTCTTGAGTTTGCCAGCCCCCGAGAAGGGATGCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS TCA 90 bp TGTTGCCCAGACTGTAGCAGGCCTGCGCCTCCACTGCCTGGTCCCTaGGCTGCCGAGACAGTTGCAGCGTCTTCTTGTAGTACTCGGCGG +
Preference number: 5 (lower is better)
Translates to: CCPDCSRPAPPLPGP*AAETVAASSCSTRR
Trigger: CCGCCGAGTACTACAAGAAGACGCTGCAACTGTCTCGGCAGCTCAGGGACCAGGCAGTGGAGGCGCAGGCCTGCTACAGTCTGGGCAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS GCA 90 bp CGGCCTGGCCATCGTCCAGGGGACAACGCTGGTCGTCCATGCGGCTaGTCTGGAACTTGGTCAACAGGTCAAAGAAGCACTCCTCGTCCG +
Preference number: 5 (lower is better)
Translates to: RPGHRPGDNAGRPCG*SGTWSTGQRSTPRP
Trigger: CGGACGAGGAGTGCTTCTTTGACCTGTTGACCAAGTTCCAGAGCAGCCGCATGGACGACCAGCGTTGTCCCCTGGACGATGGCCAGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS GCA 90 bp CAGCCCCGGCCTGGCCATCGTCCAGGGGACAACGCTGGTCGTCCATaGGGCTGCTCTGGAACTTGGTCAACAGGTCAAAGAAGCACTCCT +
Preference number: 5 (lower is better)
Translates to: QPRPGHRPGDNAGRP*GCSGTWSTGQRSTP
Trigger: AGGAGTGCTTCTTTGACCTGTTGACCAAGTTCCAGAGCAGCCGCATGGACGACCAGCGTTGTCCCCTGGACGATGGCCAGGCCGGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS CCA 90 bp CGTCCAGGGGACAACGCTGGTCGTCCATGCGGCTGCTCTGGAACTTaGTCAACAGGTCAAAGAAGCACTCCTCGTCCGAAGACGGGGCCC +
Preference number: 5 (lower is better)
Translates to: RPGDNAGRPCGCSGT*STGQRSTPRPKTGP
Trigger: GGGCCCCGTCTTCGGACGAGGAGTGCTTCTTTGACCTGTTGACCAAGTTCCAGAGCAGCCGCATGGACGACCAGCGTTGTCCCCTGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS CCA 90 bp CAGGGTGAACCTCAGGCCTGTGCTGTCCCTGAGGCCAAGAAGAACTaGCTTGTAGGCGCCATTTTCTGGCGGCTGCCACCTCCGCCATGC +
Preference number: 5 (lower is better)
Translates to: QGEPQACAVPEAKKN*LVGAIFWRLPPPPC
Trigger: GCATGGCGGAGGTGGCAGCCGCCAGAAAATGGCGCCTACAAGCCAGTTCTTCTTGGCCTCAGGGACAGCACAGGCCTGAGGTTCACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CAA 90 bp GGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGGCTGCTCTGGAACTaGGTCAACAGGTCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: GLGERMRESDSTRSGPTCRLLWN*VNRSKK
Trigger: CTTCTTTGACCTGTTGACCAAGTTCCAGAGCAGCCG...GCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp AGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCCGGCTGCTCTGGAACTaGGTCAACAGGTCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: RGCGSLTAPGRGRHAEGPRLLWN*VNRSKK
Trigger: CTTCTTTGACCTGTTGACCAAGTTCCAGAGCAGCCG...GGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp GGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTCGGAGGTGCCCTGCATaGCTGTGGGTGATTCGCAGC +
Preference number: 5 (lower is better)
Translates to: GGSETPLGRVGETAGFHIRRCPA*LWVIRS
Trigger: GCTGCGAATCACCCACAGCAATGCAGGGCACCTCCG...AATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp GGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCTACTTGATGAGCATGTaGAAGAAGTCGTCCCCCGGC +
Preference number: 5 (lower is better)
Translates to: GLGERMRESDSTRSGPTCYLMSM*KKSSPG
Trigger: GCCGGGGGACGACTTCTTCAACATGCTCATCAAGTA...GCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp ACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCTACTTGATGAGCATGTaGAAGAAGTCGTCCCCCGGC +
Preference number: 5 (lower is better)
Translates to: TGRAWGRGCGSLTAPGRGYLMSM*KKSSPG
Trigger: GCCGGGGGACGACTTCTTCAACATGCTCATCAAGTA...GCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp ATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGACATGCCGAAGGCCCCGTCCGGTTGGAAAGGACCCATaGACAACATGGCACAGACGT +
Preference number: 5 (lower is better)
Translates to: MRESDSTRSGPTCRRPRPVGKDP*TTWHRR
Trigger: ACGTCTGTGCCATGTTGTCAATGGGTCCTTTCCAAC...CGGACGGGGCCTTCGGCATGTCGGCCCCGACCTGGTGCTGTCAGACTCCCGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp GAGGACGTGGCTGTGACTGTGAGACCGGCGTCCAGGAGTGGGGGCAGGGTGGGCGTTGGAAAGGACCCATaGACAACATGGCACAGACGT +
Preference number: 5 (lower is better)
Translates to: EDVAVTVRPASRSGGRVGVGKDP*TTWHRR
Trigger: ACGTCTGTGCCATGTTGTCAATGGGTCCTTTCCAAC...GCCCACCCTGCCCCCACTCCTGGACGCCGGTCTCACAGTCACAGCCACGTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp CTGAGAGTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCTTCCAGGACAGTTGCTaGCCTTTGGCGTGGTACACG +
Preference number: 5 (lower is better)
Translates to: LRVGPRGTLLDGTASPGGFQDSC*PLAWYT
Trigger: CGTGTACCACGCCAAAGGCAAGCAACTGTCCTGGAA...GCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCACTCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CAA 90 bp GGTCACCACGGTGGCCTCGCATGGCCTTGGGCCTTGCCTGATTACTGCCCCAGGTTCCAGGACAGTTGCTaGCCTTTGGCGTGGTACACG +
Preference number: 5 (lower is better)
Translates to: GHHGGLAWPWALPDYCPRFQDSC*PLAWYT
Trigger: CGTGTACCACGCCAAAGGCAAGCAACTGTCCTGGAA...CCTGGGGCAGTAATCAGGCAAGGCCCAAGGCCATGCGAGGCCACCGTGGTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CAA 90 bp CCCAAGAGGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTGGCGTTCCAGGACAGTaGCTTGCCTTTGGCGTGGTA +
Preference number: 5 (lower is better)
Translates to: PKRRLRDTFGEGGGDSRVGVPGQ*LAFGVV
Trigger: TACCACGCCAAAGGCAAGCAACTGTCCTGGAACGCC...AACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCCTCTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CAA 90 bp GGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTATGGCCAGGCGCTCCTaGTGGAAGGTCGTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: GGSETPLGRVGETAGFHIMARRS*WKVVAS
Trigger: AGAGGCCACGACCTTCCACAAGGAGCGCCTGGCCAT...AATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CAA 90 bp GGGGCCATGGTAGGGCCCTTGGCAGTCTTGGGAGGTGCCAAGGCTGGGTCTGGACTCCTCTCGGCTGCCTaGTCTCCAAACTCCTTAGCA +
Preference number: 5 (lower is better)
Translates to: GAMVGPLAVLGGAKAGSGLLSAA*SPNSLA
Trigger: TGCTAAGGAGTTTGGAGACAAGGCAGCCGAGAGGAG...TCCAGACCCAGCCTTGGCACCTCCCAAGACTGCCAAGGGCCCTACCATGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS GCA 90 bp GGTATTCCAGCGCCCGGCCGTGCTCCTTCAGGTAGAAGTAGGCGTTaGCCAGCTGGCTGTAGATGGCACTCAGTGTCTTCAGGTCCTCGG +
Preference number: 5 (lower is better)
Translates to: GIPAPGRAPSGRSRR*PAGCRWHSVSSGPR
Trigger: CCGAGGACCTGAAGACACTGAGTGCCATCTACAGCCAGCTGGGCAACGCCTACTTCTACCTGAAGGAGCACGGCCGGGCGCTGGAATACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS GCA 90 bp GAAGACGTGGGCGTTCCCCAGGTTGCTGTAGGCCCTCCTCTCGGCTaGCTTGTCTCCAAACTCCTTAGCAATGGCCAGGCGCTCCTTGTG +
Preference number: 5 (lower is better)
Translates to: EDVGVPQVAVGPPLG*LVSKLLSNGQALLV
Trigger: CACAAGGAGCGCCTGGCCATTGCTAAGGAGTTTGGAGACAAGGCAGCCGAGAGGAGGGCCTACAGCAACCTGGGGAACGCCCACGTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS GCA 90 bp CAGCGTGTAGGTGTTGCCCAGACTGTAGCAGGCCTGCGCCTCCACTaGCTGGTCCCTGAGCTGCCGAGACAGTTGCAGCGTCTTCTTGTA +
Preference number: 5 (lower is better)
Translates to: QRVGVAQTVAGLRLH*LVPELPRQLQRLLV
Trigger: TACAAGAAGACGCTGCAACTGTCTCGGCAGCTCAGGGACCAGGCAGTGGAGGCGCAGGCCTGCTACAGTCTGGGCAACACCTACACGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS-3UTR CAA 90 bp GGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCGCTGGAGGACTGGTACTaGATGAGCATGTTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: GKGLGERMRESDSTRSGPLEDWY*MSMLKK
Trigger: CTTCTTCAACATGCTCATCAAGTACCAGTCCTCCAG...CGGCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp GTGGGGCCTAGAGGCACCCTCCTAGATGGAACTGCCAGCCCTGGGGGCTGTGGGTCCTGGCTTGGGGTTTaGGAATGTCGAAGTTCATGC +
Preference number: 5 (lower is better)
Translates to: VGPRGTLLDGTASPGGCGSWLGV*ECRSSC
Trigger: GCATGAACTTCGACATTCCAAAACCCCAAGCCAGGA...CCCACAGCCCCCAGGGCTGGCAGTTCCATCTAGGAGGGTGCCTCTAGGCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp CCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAGACAGTTGCTTGCCTTaGGCGTGGTACACGTTCCCG +
Preference number: 5 (lower is better)
Translates to: PLGRVGETAGFHIWQGRADSCLP*AWYTFP
Trigger: CGGGAACGTGTACCACGCCAAAGGCAAGCAACTGTC...TGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CAA 90 bp AGGCCCTGGAGCAGCCAGTGGGGCAACAGGCGACCACCTCCTGTCCTTCATCCACTCCTCTCGGCTGCCTaGTCTCCAAACTCCTTAGCA +
Preference number: 5 (lower is better)
Translates to: RPWSSQWGNRRPPPVLHPLLSAA*SPNSLA
Trigger: TGCTAAGGAGTTTGGAGACAAGGCAGCCGAGAGGAG...TGGATGAAGGACAGGAGGTGGTCGCCTGTTGCCCCACTGGCTGCTCCAGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CAA 90 bp GTCACCACGGTGGCCTCGCATGGCCTTGGGCCTTGCCTGATTACTGCCCCAGGCGAGCTGCCGAGACAGTaGCAGCGTCTTCTTGTAGTA +
Preference number: 5 (lower is better)
Translates to: VTTVASHGLGPCLITAPGELPRQ*QRLLVV
Trigger: TACTACAAGAAGACGCTGCAACTGTCTCGGCAGCTC...GCCTGGGGCAGTAATCAGGCAAGGCCCAAGGCCATGCGAGGCCACCGTGGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CAA 90 bp TCCCTTCTCGGGGGCTGGCAAACTCAAGACCTTTGGGAGTGGGGGACACATGGGGCAGCCCTCTCCTACTaGGGTCTGAGGACAGAAGCC +
Preference number: 5 (lower is better)
Translates to: SLLGGWQTQDLWEWGTHGAALSY*GLRTEA
Trigger: GGCTTCTGTCCTCAGACCCAAGTAGGAGAGGGCTGC...CCCATGTGTCCCCCACTCCCAAAGGTCTTGAGTTTGCCAGCCCCCGAGAAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS CCA 90 bp CGTGCTCCTTCAGGTAGAAGTAGGCGTTGCCCAGCTGGCTGTAGATaGCACTCAGTGTCTTCAGGTCCTCGGTGCCCACCTGCACAGCAG +
Preference number: 5 (lower is better)
Translates to: RAPSGRSRRCPAGCR*HSVSSGPRCPPAQQ
Trigger: CTGCTGTGCAGGTGGGCACCGAGGACCTGAAGACACTGAGTGCCATCTACAGCCAGCTGGGCAACGCCTACTTCTACCTGAAGGAGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS-3UTR CAA 90 bp ACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGCCTGGAGGACTGGTACTaGATGAGCATGTTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: TGRAWGRGCGSLTAPGRGLEDWY*MSMLKK
Trigger: CTTCTTCAACATGCTCATCAAGTACCAGTCCTCCAG...GCCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp TGGGGCTGCATGCCCAGTGCCTGTCCTCGGCAATGGCCTCGGGAGGACGTGGCTCTGGAGGACTGGTACTaGATGAGCATGTTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: WGCMPSACPRQWPREDVALEDWY*MSMLKK
Trigger: CTTCTTCAACATGCTCATCAAGTACCAGTCCTCCAG...AGCCACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCATGCAGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp AACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGTCCTGGCTTGGGGTTTaGGAATGTCGAAGTTCATGC +
Preference number: 5 (lower is better)
Translates to: NGKGLGERMRESDSTRSGSWLGV*ECRSSC
Trigger: GCATGAACTTCGACATTCCAAAACCCCAAGCCAGGA...CCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp AACGGGAAGGGCTTGGGGGAGAGGATGCGGGAGTCTGACAGCACCAGGTCGGGGGTTGGAAAGGACCCATaGACAACATGGCACAGACGT +
Preference number: 5 (lower is better)
Translates to: NGKGLGERMRESDSTRSGVGKDP*TTWHRR
Trigger: ACGTCTGTGCCATGTTGTCAATGGGTCCTTTCCAAC...CCCCGACCTGGTGCTGTCAGACTCCCGCATCCTCTCCCCCAAGCCCTTCCCGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp GACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAGAACGGGAAGGGCTTGGGGGAAGCGCCCCAGGACCTaGAGTGTGTTTCCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: DSRVSHLAGQGRTGRAWGKRPRT*SVFPRF
Trigger: AAACCTGGGAAACACACTCAAGGTCCTGGGGCGCTT...CCCCCAAGCCCTTCCCGTTCTGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CAA 90 bp GACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAGAACGGGAAGGGCTTGGGGGCTCCTCTCGGCTGCCTaGTCTCCAAACTCCTTAGCA +
Preference number: 5 (lower is better)
Translates to: DSRVSHLAGQGRTGRAWGLLSAA*SPNSLA
Trigger: TGCTAAGGAGTTTGGAGACAAGGCAGCCGAGAGGAG...CCCCCAAGCCCTTCCCGTTCTGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS CCA 90 bp TGGCCATCGTCCAGGGGACAACGCTGGTCGTCCATGCGGCTGCTCTaGAACTTGGTCAACAGGTCAAAGAAGCACTCCTCGTCCGAAGAC +
Preference number: 5 (lower is better)
Translates to: WPSSRGQRWSSMRLL*NLVNRSKKHSSSED
Trigger: GTCTTCGGACGAGGAGTGCTTCTTTGACCTGTTGACCAAGTTCCAGAGCAGCCGCATGGACGACCAGCGTTGTCCCCTGGACGATGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp CCCAAGAGGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCCTGGCTTGGGGTTTaGGAATGTCGAAGTTCATGC +
Preference number: 5 (lower is better)
Translates to: PKRRLRDTFGEGGGDSRVSWLGV*ECRSSC
Trigger: GCATGAACTTCGACATTCCAAAACCCCAAGCCAGGA...AACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCCTCTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp CCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAGTTGGAAAGGACCCATaGACAACATGGCACAGACGT +
Preference number: 5 (lower is better)
Translates to: PLGRVGETAGFHIWQGRAVGKDP*TTWHRR
Trigger: ACGTCTGTGCCATGTTGTCAATGGGTCCTTTCCAAC...TGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp GCACCTATTAGTCTTTTCGCTTTGCAGGGGACGTTCTGTCCTGTGTCTGCAGCATTGAAGTCGCCCGCCTaGCACAGACGCTCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: APISLFALQGTFCPVSAALKSPA*HRRSPS
Trigger: GGAGGGCGAGCGTCTGTGCAAGGCGGGCGACTTCAA...TGCTGCAGACACAGGACAGAACGTCCCCTGCAAAGCGAAAAGACTAATAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CAA 90 bp GATAAGAAAAAGAAACTCCGGCAGCCCAGCACCACATCCAAGCCTGGTGTTCCCAAGGCCACGCCTGTCTaGAAGTCGCCCGCCTTGCAC +
Preference number: 5 (lower is better)
Translates to: DKKKKLRQPSTTSKPGVPKATPV*KSPALH
Trigger: GTGCAAGGCGGGCGACTTCAAGACAGGCGTGGCCTT...GGGAACACCAGGCTTGGATGTGGTGCTGGGCTGCCGGAGTTTCTTTTTCTTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CAA 90 bp TTCGCTTTGCAGGGGACGTTCTGTCCTGTGTCTGCAGCACTGCTGACCGGCATGAAGCGCCCCAGGACCTaGAGTGTGTTTCCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: FALQGTFCPVSAALLTGMKRPRT*SVFPRF
Trigger: AAACCTGGGAAACACACTCAAGGTCCTGGGGCGCTT...CATGCCGGTCAGCAGTGCTGCAGACACAGGACAGAACGTCCCCTGCAAAGCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CAA 90 bp TACGTTCTGGGAGGCAGGCATCCCTTCTCGGGGGCTGGCAAACTCAAGACCTTTGGCGTTCCAGGACAGTaGCTTGCCTTTGGCGTGGTA +
Preference number: 5 (lower is better)
Translates to: YVLGGRHPFSGAGKLKTFGVPGQ*LAFGVV
Trigger: TACCACGCCAAAGGCAAGCAACTGTCCTGGAACGCC...AAAGGTCTTGAGTTTGCCAGCCCCCGAGAAGGGATGCCTGCCTCCCAGAACGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS-3UTR CAA 90 bp GGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTGAGCTGCCGAGACAGTaGCAGCGTCTTCTTGTAGTA +
Preference number: 5 (lower is better)
Translates to: GGSETPLGRVGETAGFHIELPRQ*QRLLVV
Trigger: TACTACAAGAAGACGCTGCAACTGTCTCGGCAGCTC...AATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS-3UTR CAA 90 bp GACAGCAGGGTTTCACATTTGGCAGGGCAGGGCAGAACGGGAAGGGCTTGGGGGCTGGAGGACTGGTACTaGATGAGCATGTTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: DSRVSHLAGQGRTGRAWGLEDWY*MSMLKK
Trigger: CTTCTTCAACATGCTCATCAAGTACCAGTCCTCCAG...CCCCCAAGCCCTTCCCGTTCTGCCCTGCCCTGCCAAATGTGAAACCCTGCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp GGCGGCTCAGAGACACCTTTGGGGAGGGTGGGGGAGACAGCAGGGTTTCACATTCTGGAGGACTGGTACTaGATGAGCATGTTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: GGSETPLGRVGETAGFHILEDWY*MSMLKK
Trigger: CTTCTTCAACATGCTCATCAAGTACCAGTCCTCCAG...AATGTGAAACCCTGCTGTCTCCCCCACCCTCCCCAAAGGTGTCTCTGAGCCGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000429455.5
ENST00000440944.6
CDS-3UTR CAA 90 bp ATTAGTCTTTTCGCTTTGCAGGGGACGTTCTGTCCTGTGTCTGCAGCACTGCTGATTAGTCTTTTCGCTTaGCAGGGGACGTTCTGTCCT +
Preference number: 5 (lower is better)
Translates to: ISLFALQGTFCPVSAALLISLFA*QGTFCP
Trigger: AGGACAGAACGTCCCCTGCAAAGCGAAAAGACTAAT...CAGCAGTGCTGCAGACACAGGACAGAACGTCCCCTGCAAAGCGAAAAGACTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS CCA 72 bp CCGTCATCGAGGGCTGGGCGATCCTGTCCTCCAGGGTaGGGGCGGCCGTGGCCTCGGCAGCCCCGGCCTGGC +
Preference number: 6 (lower is better)
Translates to: PSSRAGRSCPPG*GRPWPRQPRPG
Trigger: GCCAGGCCGGGGCTGCCGAGGCCACGGCCGCCCCCACCCTGGAGGACAGGATCGCCCAGCCCTCGATGACGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS GCA 72 bp GCACCCGGACGTCGGCGCTGTCCAGCGGGGAGTGGCTaGCCTCCCGGGGCCTCCTCTCAGCGTCCGGGCCTT +
Preference number: 6 (lower is better)
Translates to: APGRRRCPAGSG*PPGASSQRPGL
Trigger: AAGGCCCGGACGCTGAGAGGAGGCCCCGGGAGGGCAGCCACTCCCCGCTGGACAGCGCCGACGTCCGGGTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS CCA 72 bp ATTCGCAGCCCCGGCAGGCTGCCCACGCTGGCCCGCTaGTCGTCCAGCCGGCGGCTCTGGGAGCTGGCGATG +
Preference number: 6 (lower is better)
Translates to: IRSPGRLPTLAR*SSSRRLWELAM
Trigger: CATCGCCAGCTCCCAGAGCCGCCGGCTGGACGACCAGCGGGCCAGCGTGGGCAGCCTGCCGGGGCTGCGAAT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS GCA 72 bp GCCGGGCTGGTCAGGCGGCCGAGCACCAGCTGCAGCTaGGCCACGTTCATGCGGGCCGTGAGCTCCCCATGG +
Preference number: 6 (lower is better)
Translates to: AGLVRRPSTSCS*ATFMRAVSSPW
Trigger: CCATGGGGAGCTCACGGCCCGCATGAACGTGGCGCAGCTGCAGCTGGTGCTCGGCCGCCTGACCAGCCCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS GCA 72 bp GAAGACGGGGCCCTCGGGATGCTCGTGCGTGGCACGTaGACCCGGACGTCGGCGCTGTCCAGCGGGGAGTGG +
Preference number: 6 (lower is better)
Translates to: EDGALGMLVRGT*TRTSALSSGEW
Trigger: CCACTCCCCGCTGGACAGCGCCGACGTCCGGGTGCACGTGCCACGCACGAGCATCCCGAGGGCCCCGTCTTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS TCA 72 bp GGCCCTCGCCCACTCTGTCGGCCAGCTCCTGGGCAATaGGCAGGTGCCGCAGGTGGTACTCGGCCGCGCGCT +
Preference number: 6 (lower is better)
Translates to: GPRPLCRPAPGQ*AGAAGGTRPRA
Trigger: AGCGCGCGGCCGAGTACCACCTGCGGCACCTGCTCATTGCCCAGGAGCTGGCCGACAGAGTGGGCGAGGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS GCA 72 bp ACGGGGCCCTCGGGATGCTCCTCGGCACCCGCCGACTaGCCCGGACTTCTCCCCTCTCATGGGTGCTACCCC +
Preference number: 6 (lower is better)
Translates to: TGPSGCSSAPAD*PGLLPSHGCYP
Trigger: GGGGTAGCACCCATGAGAGGGGAGAAGTCCGGGGCAGTCGGCGGGTGCCGAGGAGCATCCCGAGGGCCCCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392944.5
CDS CCA 72 bp GGCTCGCCGTGGCCTCGGAGGTGCCCTGCATTGCTGTaGGTGATTCGCAGCCCCGGCAGGCTGCCCACGCTG +
Preference number: 6 (lower is better)
Translates to: GSPWPRRCPALL*VIRSPGRLPTL
Trigger: CAGCGTGGGCAGCCTGCCGGGGCTGCGAATCACCCACAGCAATGCAGGGCACCTCCGAGGCCACGGCGAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS CCA 72 bp CACGCCCGGCCCTCGCCCACTCTGTCGGCCAGCTCCTaGGCAATGAGCAGGTGCCGCAGGTGGTACTCGGCC +
Preference number: 6 (lower is better)
Translates to: HARPSPTLSASS*AMSRCRRWYSA
Trigger: GGCCGAGTACCACCTGCGGCACCTGCTCATTGCCCAGGAGCTGGCCGACAGAGTGGGCGAGGGCCGGGCGTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS GCA 72 bp GCCTTGCACAGGGTCTCTCGGACATCGGGCGGCAGGTaGCCGGGGTCCTGCGTGGCGTTTGCGGCGTTCCAG +
Preference number: 6 (lower is better)
Translates to: ALHRVSRTSGGR*PGSCVAFAAFQ
Trigger: CTGGAACGCCGCAAACGCCACGCAGGACCCCGGGCACCTGCCGCCCGATGTCCGAGAGACCCTGTGCAAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS CCA 72 bp GGCGCCATTTTCTGGCGGCTGCCACCTCCGCCATGCTaGCCTGGCCTCGATCCCACCCCTCCGCAGCTCCTG +
Preference number: 6 (lower is better)
Translates to: GAIFWRLPPPPC*PGLDPTPPQLL
Trigger: CAGGAGCTGCGGAGGGGTGGGATCGAGGCCAGGCCAGCATGGCGGAGGTGGCAGCCGCCAGAAAATGGCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS TCA 72 bp GCACCAGCTGCAGCTGCGCCACGTTCATGCGGGCCGTaGGCTCCCCATGGCGGTCCCCGATCTCCTGGGAGA +
Preference number: 6 (lower is better)
Translates to: APAAAAPRSCGP*APHGGPRSPGR
Trigger: TCTCCCAGGAGATCGGGGACCGCCATGGGGAGCTCACGGCCCGCATGAACGTGGCGCAGCTGCAGCTGGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS CCA 72 bp GTCCGGCATGGTAGGGCCCCGGGGCAGTACGTCAGGTaGCGGGCAGCGCTGGTCATCGATCCTGGAGGACTG +
Preference number: 6 (lower is better)
Translates to: VRHGRAPGQYVR*RAALVIDPGGL
Trigger: CAGTCCTCCAGGATCGATGACCAGCGCTGCCCGCCACCTGACGTACTGCCCCGGGGCCCTACCATGCCGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS CCA 72 bp AGCGAGTCCCTGCTGGGCCCCCGCCAGTCCCCTGAATaGTGGCTGTCTCCATTCTGCTCCCGCTCCAGGGGG +
Preference number: 6 (lower is better)
Translates to: SESLLGPRQSPE*WLSPFCSRSRG
Trigger: CCCCCTGGAGCGGGAGCAGAATGGAGACAGCCACCATTCAGGGGACTGGCGGGGGCCCAGCAGGGACTCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354753.7
ENST00000440944.6
CDS GCA 72 bp ATCGGGCGGCAGGTGCCCGGGGTCCTGCGTGGCGTTTaGGGCGTTCCAGGACAGTTGCTTGCCTTTGGCGTG +
Preference number: 6 (lower is better)
Translates to: IGRQVPGVLRGV*GVPGQLLAFGV
Trigger: CACGCCAAAGGCAAGCAACTGTCCTGGAACGCCGCAAACGCCACGCAGGACCCCGGGCACCTGCCGCCCGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS GCA 72 bp GTCTCTCGGACATCGGGCGGCAGGTGCCCGGGGTCCTaGGTGGCGTTTGCGGCGTTCCAGGACAGTTGCTTG +
Preference number: 6 (lower is better)
Translates to: VSRTSGGRCPGS*VAFAAFQDSCL
Trigger: CAAGCAACTGTCCTGGAACGCCGCAAACGCCACGCAGGACCCCGGGCACCTGCCGCCCGATGTCCGAGAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS GCA 72 bp CCATGGCGGTCCCCGATCTCCTGGGAGATCTGCAGGTaGTTCTTGGCGAAGGTCAGGGCCTGCGCTGGGCGC +
Preference number: 6 (lower is better)
Translates to: PWRSPISWEICR*FLAKVRACAGR
Trigger: GCGCCCAGCGCAGGCCCTGACCTTCGCCAAGAAGCACCTGCAGATCTCCCAGGAGATCGGGGACCGCCATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS CCA 72 bp CACTCCTCGTCCGAAGACGGGGCCCTCGGGATGCTCTaGGGAGGGAGTGGGGTCACCGCAGCCAAAGCTAGC +
Preference number: 6 (lower is better)
Translates to: HSSSEDGALGML*GGSGVTAAKAS
Trigger: GCTAGCTTTGGCTGCGGTGACCCCACTCCCTCCCCAGAGCATCCCGAGGGCCCCGTCTTCGGACGAGGAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291775.3
CDS CCA 72 bp CTCGGACATCGGGCGGCAGGTGCCCGGGGTCCTGCGTaGCGTTTGCGGCGTTCCAGGACAGTTGCTTGCCTT +
Preference number: 6 (lower is better)
Translates to: LGHRAAGARGPA*RLRRSRTVACL
Trigger: AAGGCAAGCAACTGTCCTGGAACGCCGCAAACGCCACGCAGGACCCCGGGCACCTGCCGCCCGATGTCCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS CCA 72 bp TCTTGGCGAAGGTCAGGGCCTGCGCTGGGCGCCCCATaGACACGTAGGCATTTCCCAGGCTCCAGCACGCCC +
Preference number: 6 (lower is better)
Translates to: SWRRSGPALGAP*TRRHFPGSSTP
Trigger: GGGCGTGCTGGAGCCTGGGAAATGCCTACGTGTCCATGGGGCGCCCAGCGCAGGCCCTGACCTTCGCCAAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS CCA 72 bp GGTCCCCGATCTCCTGGGAGATCTGCAGGTGCTTCTTaGCGAAGGTCAGGGCCTGCGCTGGGCGCCCCATGG +
Preference number: 6 (lower is better)
Translates to: GPRSPGRSAGAS*RRSGPALGAPW
Trigger: CCATGGGGCGCCCAGCGCAGGCCCTGACCTTCGCCAAGAAGCACCTGCAGATCTCCCAGGAGATCGGGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS CCA 72 bp AGCTGCGCCACGTTCATGCGGGCCGTGAGCTCCCCATaGCGGTCCCCGATCTCCTGGGAGATCTGCAGGTGC +
Preference number: 6 (lower is better)
Translates to: SCATFMRAVSSP*RSPISWEICRC
Trigger: GCACCTGCAGATCTCCCAGGAGATCGGGGACCGCCATGGGGAGCTCACGGCCCGCATGAACGTGGCGCAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS CCA 72 bp CATTTTCTGGCGGCTGCCACCTCCGCCATGCTGGCCTaGCCTCGATCCCACCCCTCCGCAGCTCCTGATGCG +
Preference number: 6 (lower is better)
Translates to: HFLAAATSAMLA*PRSHPSAAPDA
Trigger: CGCATCAGGAGCTGCGGAGGGGTGGGATCGAGGCCAGGCCAGCATGGCGGAGGTGGCAGCCGCCAGAAAATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS CAA 72 bp CATCGGGCGGCAGGTGCCCGGGGTCCTGCGTGGCGTTaGCGGCGTTCCAGGACAGTTGCTTGCCTTTGGCGT +
Preference number: 6 (lower is better)
Translates to: HRAAGARGPAWR*RRSRTVACLWR
Trigger: ACGCCAAAGGCAAGCAACTGTCCTGGAACGCCGCAAACGCCACGCAGGACCCCGGGCACCTGCCGCCCGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS CAA 90 bp TCGGTGCCCACCTGCACAGCAGCCTCAAAGAAGGCCACGCCTGTCTaGAAGTCGCCCGCCTTGCACAGACGCTCGCCCTCCAGCGCCAGC +
Preference number: 6 (lower is better)
Translates to: SVPTCTAASKKATPV*KSPALHRRSPSSAS
Trigger: GCTGGCGCTGGAGGGCGAGCGTCTGTGCAAGGCGGGCGACTTCAAGACAGGCGTGGCCTTCTTTGAGGCTGCTGTGCAGGTGGGCACCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS GCA 72 bp CCGCGCGCTCGTAGTCCTGCAGCAGCGTGTAGGTGTTaGCCAGACTGTAGCAGGCCTGCGCCTCCACTGCCT +
Preference number: 6 (lower is better)
Translates to: PRARSPAAACRC*PDCSRPAPPLP
Trigger: AGGCAGTGGAGGCGCAGGCCTGCTACAGTCTGGGCAACACCTACACGCTGCTGCAGGACTACGAGCGCGCGG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS CCA 72 bp GCAGCCCCGGCCTGGCCATCGTCCAGGGGACAACGCTaGTCGTCCATGCGGCTGCTCTGGAACTTGGTCAAC +
Preference number: 6 (lower is better)
Translates to: AAPAWPSSRGQR*SSMRLLWNLVN
Trigger: GTTGACCAAGTTCCAGAGCAGCCGCATGGACGACCAGCGTTGTCCCCTGGACGATGGCCAGGCCGGGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS CCA 72 bp GGGCCCCGGGGCAGTACGTCAGGTGGCGGGCAGCGCTaGTCATCGATCCTGGAGGACTGGTACTTGATGAGC +
Preference number: 6 (lower is better)
Translates to: GPRGSTSGGGQR*SSILEDWYLMS
Trigger: GCTCATCAAGTACCAGTCCTCCAGGATCGATGACCAGCGCTGCCCGCCACCTGACGTACTGCCCCGGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS CCA 72 bp TTGTCTCCCTGCTCTTGGGCGATGCTCAGATGCCGCTaGCAGCAGACGGCAGCCTCGTCGAAGCGCCCCAGG +
Preference number: 6 (lower is better)
Translates to: LSPCSWAMLRCR*QQTAASSKRPR
Trigger: CCTGGGGCGCTTCGACGAGGCTGCCGTCTGCTGCCAGCGGCATCTGAGCATCGCCCAAGAGCAGGGAGACAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS CAA 72 bp CGGTCACCGATGGTCCGCGCCAGCAGGAGGTCATGCTaGTGGTATTCCAGCGCCCGGCCGTGCTCCTTCAGG +
Preference number: 6 (lower is better)
Translates to: RSPMVRASRRSC*WYSSARPCSFR
Trigger: CCTGAAGGAGCACGGCCGGGCGCTGGAATACCACAAGCATGACCTCCTGCTGGCGCGGACCATCGGTGACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS CAA 90 bp TCTCTCGGACATCGGGCGGCAGGTGCCCGGGGTCCTGCGTGGCGTTaGCGGCGTTCCAGGACAGTTGCTTGCCTTTGGCGTGGTACACGT +
Preference number: 6 (lower is better)
Translates to: SLGHRAAGARGPAWR*RRSRTVACLWRGTR
Trigger: ACGTGTACCACGCCAAAGGCAAGCAACTGTCCTGGAACGCCGCAAACGCCACGCAGGACCCCGGGCACCTGCCGCCCGATGTCCGAGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS GCA 72 bp ATGCGGTCACCGATGGTCCGCGCCAGCAGGAGGTCATaGTTGTGGTATTCCAGCGCCCGGCCGTGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: MRSPMVRASRRS*LWYSSARPCSF
Trigger: GAAGGAGCACGGCCGGGCGCTGGAATACCACAAGCATGACCTCCTGCTGGCGCGGACCATCGGTGACCGCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS GCA 72 bp TCGCCTCCCCAACCTTGTCTCCCTGCTCTTGGGCGATaGTCAGATGCCGCTGGCAGCAGACGGCAGCCTCGT +
Preference number: 6 (lower is better)
Translates to: SPPQPCLPALGR*SDAAGSRRQPR
Trigger: ACGAGGCTGCCGTCTGCTGCCAGCGGCATCTGAGCATCGCCCAAGAGCAGGGAGACAAGGTTGGGGAGGCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS GCA 72 bp CCAGGGACAGGTTCCTCTCGTAGAACTCGGAGGCCTTaGACAGGGTCTCTCGGACATCGGGCGGCAGGTGCC +
Preference number: 6 (lower is better)
Translates to: PGTGSSRRTRRP*TGSLGHRAAGA
Trigger: GGCACCTGCCGCCCGATGTCCGAGAGACCCTGTGCAAGGCCTCCGAGTTCTACGAGAGGAACCTGTCCCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS GCA 72 bp ACAAATAGTGGGTGTTGCCCAGGTTGCCGTAGGCCCTaGCCTGCGCCGCACGGTCGCCCAGCTCCTTCACCA +
Preference number: 6 (lower is better)
Translates to: TNSGCCPGCRRP*PAPHGRPAPSP
Trigger: TGGTGAAGGAGCTGGGCGACCGTGCGGCGCAGGGCAGGGCCTACGGCAACCTGGGCAACACCCACTATTTGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS CCA 72 bp TGGGAGCTGGCGATGAGGTCGAAGAATTCCTCGGTCTaGGGCGAGGCCGTCATCGAGGGCTGGGCGATCCTG +
Preference number: 6 (lower is better)
Translates to: WELAMRSKNSSV*GEAVIEGWAIL
Trigger: CAGGATCGCCCAGCCCTCGATGACGGCCTCGCCCCAGACCGAGGAATTCTTCGACCTCATCGCCAGCTCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS TCA 72 bp AGACCGGGGGCTGCTTGCCCAGGCCACACACACTTCTaGGACCCTGGCCAAGATCGGGACTCTAACCTGCCC +
Preference number: 6 (lower is better)
Translates to: RPGAACPGHTHF*DPGQDRDSNLP
Trigger: GGGCAGGTTAGAGTCCCGATCTTGGCCAGGGTCTCAGAAGTGTGTGTGGCCTGGGCAAGCAGCCCCCGGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291775.3
CDS TCA 72 bp CCTGCACAGCAGCCTCAAAGAAGGCCACGCCTGTCTTaGAGTCGCCCGCCTTGCACAGACGCTCGCCCTCCA +
Preference number: 6 (lower is better)
Translates to: PAQQPQRRPRLS*SRPPCTDARPP
Trigger: TGGAGGGCGAGCGTCTGTGCAAGGCGGGCGACTTCAAGACAGGCGTGGCCTTCTTTGAGGCTGCTGTGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS GCA 72 bp TGTTTCCCAGGTTTCCACTGGCCTTGGCCTCCCCCATaGGGTCACCGATGGTCCGCGCCAGCAGGAGGTCAT +
Preference number: 6 (lower is better)
Translates to: CFPGFHWPWPPP*GHRWSAPAGGH
Trigger: ATGACCTCCTGCTGGCGCGGACCATCGGTGACCGCATGGGGGAGGCCAAGGCCAGTGGAAACCTGGGAAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS GCA 72 bp CAAAGCGCCCCAGGAAGACGTGGGCGTTCCCCAGGTTaGTGTAGGCCCTCCTCTCGGCTGCCTTGTCTCCAA +
Preference number: 6 (lower is better)
Translates to: QSAPGRRGRSPG*CRPSSRLPCLQ
Trigger: TTGGAGACAAGGCAGCCGAGAGGAGGGCCTACAGCAACCTGGGGAACGCCCACGTCTTCCTGGGGCGCTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS GCA 72 bp CTGGAACACTTCCCAGACATCCCGGGAAGCCTCCCGTaGCTCCTGTCCCTGTGCCCACCACACCCTGTGTCA +
Preference number: 6 (lower is better)
Translates to: LEHFPDIPGSLP*LLSLCPPHPVS
Trigger: TGACACAGGGTGTGGTGGGCACAGGGACAGGAGGCACGGGAGGCTTCCCGGGATGTCTGGGAAGTGTTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392944.5
CDS CCA 72 bp TTGATGAGCATGTTGAAGAAGTCGTCCCCCGGCTCCTaGGGCTCGCCGTGGCCTCGGAGGTGCCCTGCATTG +
Preference number: 6 (lower is better)
Translates to: LMSMLKKSSPGS*GSPWPRRCPAL
Trigger: CAATGCAGGGCACCTCCGAGGCCACGGCGAGCCCCAGGAGCCGGGGGACGACTTCTTCAACATGCTCATCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS CAA 72 bp ACCTGCACAGCAGCCTCAAAGAAGGCCACGCCTGTCTaGAAGTCGCCCGCCTTGCACAGACGCTCGCCCTCC +
Preference number: 6 (lower is better)
Translates to: TCTAASKKATPV*KSPALHRRSPS
Trigger: GGAGGGCGAGCGTCTGTGCAAGGCGGGCGACTTCAAGACAGGCGTGGCCTTCTTTGAGGCTGCTGTGCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS CAA 90 bp CAGGTGCCCGGGGTCCTGCGTGGCGTTTGCGGCGTTCCAGGACAGTaGCTTGCCTTTGGCGTGGTACACGTTCCCGATGTTGTAGAGGGC +
Preference number: 6 (lower is better)
Translates to: QVPGVLRGVCGVPGQ*LAFGVVHVPDVVEG
Trigger: GCCCTCTACAACATCGGGAACGTGTACCACGCCAAAGGCAAGCAACTGTCCTGGAACGCCGCAAACGCCACGCAGGACCCCGGGCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS GCA 72 bp GGCGTTCCCCAGGTTGCTGTAGGCCCTCCTCTCGGCTaGCTTGTCTCCAAACTCCTTAGCAATGGCCAGGCG +
Preference number: 6 (lower is better)
Translates to: GVPQVAVGPPLG*LVSKLLSNGQA
Trigger: CGCCTGGCCATTGCTAAGGAGTTTGGAGACAAGGCAGCCGAGAGGAGGGCCTACAGCAACCTGGGGAACGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS CAA 90 bp TCGTCCAGGGGACAACGCTGGTCGTCCATGCGGCTGCTCTGGAACTaGGTCAACAGGTCAAAGAAGCACTCCTCGTCCGAAGACGGGGCC +
Preference number: 6 (lower is better)
Translates to: SSRGQRWSSMRLLWN*VNRSKKHSSSEDGA
Trigger: GGCCCCGTCTTCGGACGAGGAGTGCTTCTTTGACCTGTTGACCAAGTTCCAGAGCAGCCGCATGGACGACCAGCGTTGTCCCCTGGACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS GCA 72 bp GCGCCCGGCCGTGCTCCTTCAGGTAGAAGTAGGCGTTaGCCAGCTGGCTGTAGATGGCACTCAGTGTCTTCA +
Preference number: 6 (lower is better)
Translates to: APGRAPSGRSRR*PAGCRWHSVSS
Trigger: TGAAGACACTGAGTGCCATCTACAGCCAGCTGGGCAACGCCTACTTCTACCTGAAGGAGCACGGCCGGGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS GCA 72 bp GGGTCCTGCGTGGCGTTTGCGGCGTTCCAGGACAGTTaGTTGCCTTTGGCGTGGTACACGTTCCCGATGTTG +
Preference number: 6 (lower is better)
Translates to: GSCVAFAAFQDS*LPLAWYTFPML
Trigger: CAACATCGGGAACGTGTACCACGCCAAAGGCAAGCAACTGTCCTGGAACGCCGCAAACGCCACGCAGGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS CCA 72 bp CCTCAGGCCTGTGCTGTCCCTGAGGCCAAGAAGAACTaGCTTGTAGGCGCCATTTTCTGGCGGCTGCCACCT +
Preference number: 6 (lower is better)
Translates to: PQACAVPEAKKN*LVGAIFWRLPP
Trigger: AGGTGGCAGCCGCCAGAAAATGGCGCCTACAAGCCAGTTCTTCTTGGCCTCAGGGACAGCACAGGCCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616132.4
CDS CAA 72 bp GGGGTCCTGCGTGGCGTTTGCGGCGTTCCAGGACAGTaGCTTGCCTTTGGCGTGGTACACGTTCCCGATGTT +
Preference number: 6 (lower is better)
Translates to: GVLRGVCGVPGQ*LAFGVVHVPDV
Trigger: AACATCGGGAACGTGTACCACGCCAAAGGCAAGCAACTGTCCTGGAACGCCGCAAACGCCACGCAGGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS TCA 72 bp ACCCGCTGCTCGTCCATGCGCTTAGCCTGCACCCTCTaGATGAGGCTGAAGAAGTCCTCGTCCGGCATGGTA +
Preference number: 6 (lower is better)
Translates to: TRCSSMRLACTL*MRLKKSSSGMV
Trigger: TACCATGCCGGACGAGGACTTCTTCAGCCTCATTCAGAGGGTGCAGGCTAAGCGCATGGACGAGCAGCGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS GCA 72 bp CCTGGCCATCGTCCAGGGGACAACGCTGGTCGTCCATaGGGCTGCTCTGGAACTTGGTCAACAGGTCAAAGA +
Preference number: 6 (lower is better)
Translates to: PGHRPGDNAGRP*GCSGTWSTGQR
Trigger: TCTTTGACCTGTTGACCAAGTTCCAGAGCAGCCGCATGGACGACCAGCGTTGTCCCCTGGACGATGGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS CCA 72 bp TGGCGTTTGCGGCGTTCCAGGACAGTTGCTTGCCTTTaGCGTGGTACACGTTCCCGATGTTGTAGAGGGCCC +
Preference number: 6 (lower is better)
Translates to: WRLRRSRTVACL*RGTRSRCCRGP
Trigger: GGGCCCTCTACAACATCGGGAACGTGTACCACGCCAAAGGCAAGCAACTGTCCTGGAACGCCGCAAACGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS CAA 72 bp TCATCGATCCTGGAGGACTGGTACTTGATGAGCATGTaGAAGAAGTCGTCCCCCGGCTCCTGGGGCTCGCCG +
Preference number: 6 (lower is better)
Translates to: SSILEDWYLMSM*KKSSPGSWGSP
Trigger: CGGCGAGCCCCAGGAGCCGGGGGACGACTTCTTCAACATGCTCATCAAGTACCAGTCCTCCAGGATCGATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6
CDS GCA 72 bp CCTGCGTGGCGTTTGCGGCGTTCCAGGACAGTTGCTTaGCTTTGGCGTGGTACACGTTCCCGATGTTGTAGA +
Preference number: 6 (lower is better)
Translates to: PAWRLRRSRTVA*LWRGTRSRCCR
Trigger: TCTACAACATCGGGAACGTGTACCACGCCAAAGGCAAGCAACTGTCCTGGAACGCCGCAAACGCCACGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS CCA 72 bp TCAGGTAGAAGTAGGCGTTGCCCAGCTGGCTGTAGATaGCACTCAGTGTCTTCAGGTCCTCGGTGCCCACCT +
Preference number: 6 (lower is better)
Translates to: SGRSRRCPAGCR*HSVSSGPRCPP
Trigger: AGGTGGGCACCGAGGACCTGAAGACACTGAGTGCCATCTACAGCCAGCTGGGCAACGCCTACTTCTACCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354753.7
ENST00000440944.6
ENST00000616132.4
CDS GCA 72 bp CATCGTCCAGGGGACAACGCTGGTCGTCCATGCGGCTaGTCTGGAACTTGGTCAACAGGTCAAAGAAGCACT +
Preference number: 6 (lower is better)
Translates to: HRPGDNAGRPCG*SGTWSTGQRST
Trigger: AGTGCTTCTTTGACCTGTTGACCAAGTTCCAGAGCAGCCGCATGGACGACCAGCGTTGTCCCCTGGACGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291775.3
ENST00000354753.7
ENST00000392944.5
ENST00000429455.5
ENST00000440944.6