RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPRIN3 (Homo sapiens)

Ensembl gene IDs: ENSG00000185477

Ensembl transcript IDs: ENST00000333209.4, ENST00000609438.2

Found 723 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCACACTACCCCAATTCTCAAGGCGATGCTGCTCATCCAGGCCAGTaGCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTG +
Preference number: 1 (lower is better)
Translates to: PHYPNSQGDAAHPGQ*LGGYSCVSGHTSLL
Trigger: CAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACTGGCCTGGATGAGCAGCATCGCCTTGAGAATTGGGGTAGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR CCA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTaGAGACACGGGAGGGCCAAGGTCCCAGGAAGTATAATCCACCCA +
Preference number: 1 (lower is better)
Translates to: SALEDTHVSRDTRLF*RHGRAKVPGSIIHP
Trigger: TGGGTGGATTATACTTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR CCA 90 bp CTACCCCAATTCTCAAGGCGATGCTGCTCATCCAGGCCAGTGCCTTaGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGAC +
Preference number: 1 (lower is better)
Translates to: LPQFSRRCCSSRPVP*RILMCLGTHVSSGD
Trigger: GTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACTGGCCTGGATGAGCAGCATCGCCTTGAGAATTGGGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR TCA 90 bp ACAGCAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTaGCAGCTGCTACTGTGTACACAGGCTGTACTCTGTGTATACACA +
Preference number: 1 (lower is better)
Translates to: TAEDYLGPPIWSRPC*QLLLCTQAVLCVYT
Trigger: TGTGTATACACAGAGTACAGCCTGTGTACACAGTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR GCA 90 bp TGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTaGTCATCCAGGCCAGTGCCTTGGAGGATACTCATGTGTCTCGGG +
Preference number: 1 (lower is better)
Translates to: CSFFLSTLPQFSRRC*SSRPVPWRILMCLG
Trigger: CCCGAGACACATGAGTATCCTCCAAGGCACTGGCCTGGATGAGCAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR GCA 90 bp CTGGGGATATGGCTGGGCTTTCCATCTCCTTCTAGGAATCCAGACTaGAGGATCCCAGTTTATCTTCTCAGGAGTAGGCAGAAAGGCTGG +
Preference number: 1 (lower is better)
Translates to: LGIWLGFPSPSRNPD*RIPVYLLRSRQKGW
Trigger: CCAGCCTTTCTGCCTACTCCTGAGAAGATAAACTGGGATCCTGCAGTCTGGATTCCTAGAAGGAGATGGAAAGCCCAGCCATATCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR GCA 90 bp CGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATaGTGCTCATCCAGGCCAGTGCCTTGGAGGATACTCATGTGTCTC +
Preference number: 1 (lower is better)
Translates to: RCSFFLSTLPQFSRR*CSSRPVPWRILMCL
Trigger: GAGACACATGAGTATCCTCCAAGGCACTGGCCTGGATGAGCAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR TCA 90 bp CAGGAGATTCAGCATATCCTCTGTTATTTGCCAGGTGGCAGCAGCTaGCCCGAATTTGGAGAGAATCAACCAAAAAGGGCCACGCACAAC +
Preference number: 1 (lower is better)
Translates to: QEIQHILCYLPGGSS*PEFGENQPKRATHN
Trigger: GTTGTGCGTGGCCCTTTTTGGTTGATTCTCTCCAAATTCGGGTCAGCTGCTGCCACCTGGCAAATAACAGAGGATATGCTGAATCTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR CCA 90 bp GCATATCCTCTGTTATTTGCCAGGTGGCAGCAGCTGACCCGAATTTaGAGAGAATCAACCAAAAAGGGCCACGCACAACATCAGGAAGCA +
Preference number: 1 (lower is better)
Translates to: AYPLLFARWQQLTRI*RESTKKGHAQHQEA
Trigger: TGCTTCCTGATGTTGTGCGTGGCCCTTTTTGGTTGATTCTCTCCAAATTCGGGTCAGCTGCTGCCACCTGGCAAATAACAGAGGATATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR CCA 90 bp CAAGGATGGACAGGAGATTCAGCATATCCTCTGTTATTTGCCAGGTaGCAGCAGCTGACCCGAATTTGGAGAGAATCAACCAAAAAGGGC +
Preference number: 1 (lower is better)
Translates to: QGWTGDSAYPLLFAR*QQLTRIWRESTKKG
Trigger: GCCCTTTTTGGTTGATTCTCTCCAAATTCGGGTCAGCTGCTGCCACCTGGCAAATAACAGAGGATATGCTGAATCTCCTGTCCATCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR CCA 90 bp GTAGTGCTAGTTTTACTACTGGTCAAGTCAAACTGGGGATATGGCTaGGCTTTCCATCTCCTTCTAGGAATCCAGACTGCAGGATCCCAG +
Preference number: 1 (lower is better)
Translates to: VVLVLLLVKSNWGYG*AFHLLLGIQTAGSQ
Trigger: CTGGGATCCTGCAGTCTGGATTCCTAGAAGGAGATGGAAAGCCCAGCCATATCCCCAGTTTGACTTGACCAGTAGTAAAACTAGCACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR TCA 90 bp CCATGGTCTAAATGTCTGTATCCCTCCAAAACTCATGTTGAAGTCTaGACTCCTAAGGCGATGGTGTTAGAAAGTGGGGGCTTTGGGTGG +
Preference number: 1 (lower is better)
Translates to: PWSKCLYPSKTHVEV*TPKAMVLESGGFGW
Trigger: CCACCCAAAGCCCCCACTTTCTAACACCATCGCCTTAGGAGTTCAGACTTCAACATGAGTTTTGGAGGGATACAGACATTTAGACCATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR GCA 90 bp TCTCACCAAACAACACACACACAACGCACAAACACACACACACTCTaGTCTACCAAGTACAGGAAAAACCTCGCGTTTGATGACCAGGAG +
Preference number: 1 (lower is better)
Translates to: SHQTTHTQRTNTHTL*STKYRKNLAFDDQE
Trigger: CTCCTGGTCATCAAACGCGAGGTTTTTCCTGTACTTGGTAGAGCAGAGTGTGTGTGTGTTTGTGCGTTGTGTGTGTGTTGTTTGGTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR CCA 90 bp AACTGTAGTGCTAGTTTTACTACTGGTCAAGTCAAACTGGGGATATaGCTGGGCTTTCCATCTCCTTCTAGGAATCCAGACTGCAGGATC +
Preference number: 1 (lower is better)
Translates to: NCSASFTTGQVKLGI*LGFPSPSRNPDCRI
Trigger: GATCCTGCAGTCTGGATTCCTAGAAGGAGATGGAAAGCCCAGCCATATCCCCAGTTTGACTTGACCAGTAGTAAAACTAGCACTACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR CCA 90 bp AACATTTGGCTGGAAACGGCACCTAATGAAACAAACACCCACTGGTaGGACATAAACAGCTATAGGCATAAGACAAACCATCTCGGCCCT +
Preference number: 1 (lower is better)
Translates to: NIWLETAPNETNTHW*DINSYRHKTNHLGP
Trigger: AGGGCCGAGATGGTTTGTCTTATGCCTATAGCTGTTTATGTCCCACCAGTGGGTGTTTGTTTCATTAGGTGCCGTTTCCAGCCAAATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR CCA 90 bp GAGAACATTTGGCTGGAAACGGCACCTAATGAAACAAACACCCACTaGTGGGACATAAACAGCTATAGGCATAAGACAAACCATCTCGGC +
Preference number: 1 (lower is better)
Translates to: ENIWLETAPNETNTH*WDINSYRHKTNHLG
Trigger: GCCGAGATGGTTTGTCTTATGCCTATAGCTGTTTATGTCCCACCAGTGGGTGTTTGTTTCATTAGGTGCCGTTTCCAGCCAAATGTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR TCA 90 bp AGAGTTAGAGAGATTATGTCCTGGCAGAGGCATCTGAGACAGAAGTaGCACGAACACAACTACAAATGGGTATTTAAGGCCCAAAGAGAG +
Preference number: 1 (lower is better)
Translates to: RVREIMSWQRHLRQK*HEHNYKWVFKAQRE
Trigger: CTCTCTTTGGGCCTTAAATACCCATTTGTAGTTGTGTTCGTGTCACTTCTGTCTCAGATGCCTCTGCCAGGACATAATCTCTCTAACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR TCA 90 bp AGTTTAAAGTCTCCATTTCAACAAAACTTCTGGTTGCAGCTGTCTTaGGTTTTAAGCCAGCAAGACTTTGAGTGGCTCCTCTTCCCTCTG +
Preference number: 1 (lower is better)
Translates to: SLKSPFQQNFWLQLS*VLSQQDFEWLLFPL
Trigger: CAGAGGGAAGAGGAGCCACTCAAAGTCTTGCTGGCTTAAAACTCAAGACAGCTGCAACCAGAAGTTTTGTTGAAATGGAGACTTTAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR CCA 90 bp TCAGTCCCATGTACTTCCTCTAGGGTAAGAAAATATGAATATGTCTaGTCAGAATCACAGAGATGCGCCTTGCCTTCAGTGCAGGAAAAT +
Preference number: 1 (lower is better)
Translates to: SVPCTSSRVRKYEYV*SESQRCALPSVQEN
Trigger: ATTTTCCTGCACTGAAGGCAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGAGGAAGTACATGGGACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR CCA 90 bp TTCTGTTTGCTACTCAACATTGAAGATGTGAAGAATGAGAACATTTaGCTGGAAACGGCACCTAATGAAACAAACACCCACTGGTGGGAC +
Preference number: 1 (lower is better)
Translates to: FCLLLNIEDVKNENI*LETAPNETNTHWWD
Trigger: GTCCCACCAGTGGGTGTTTGTTTCATTAGGTGCCGTTTCCAGCCAAATGTTCTCATTCTTCACATCTTCAATGTTGAGTAGCAAACAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR TCA 90 bp AGCCCATGTGTCTGGACAGATGACATTTGTAATTGCTCAGCCAGTTaGAGAATTTCATTAAGAAGGATATCGTTACAAGGATGGACAGGA +
Preference number: 1 (lower is better)
Translates to: SPCVWTDDICNCSAS*RISLRRISLQGWTG
Trigger: TCCTGTCCATCCTTGTAACGATATCCTTCTTAATGAAATTCTTCAACTGGCTGAGCAATTACAAATGTCATCTGTCCAGACACATGGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR TCA 90 bp ACTGGAGAACACCTGCACAGTATCAATTTAGTATTATCCCTAATTTaGTGGCTCTTTTCAAGAATTCAGTCCCATGTACTTCCTCTAGGG +
Preference number: 1 (lower is better)
Translates to: TGEHLHSINLVLSLI*WLFSRIQSHVLPLG
Trigger: CCCTAGAGGAAGTACATGGGACTGAATTCTTGAAAAGAGCCATCAAATTAGGGATAATACTAAATTGATACTGTGCAGGTGTTCTCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR TCA 90 bp TTCCACTGCAGATTCCTAGCAGAAGCTGTCACATGGAAAATCAACTaGTTCTGCACATTCATGGTTAAAAGAACGATTTCAATAGCAGTG +
Preference number: 1 (lower is better)
Translates to: FHCRFLAEAVTWKIN*FCTFMVKRTISIAV
Trigger: CACTGCTATTGAAATCGTTCTTTTAACCATGAATGTGCAGAATCAGTTGATTTTCCATGTGACAGCTTCTGCTAGGAATCTGCAGTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR GCA 90 bp ACACTCACAGAATGTATTGACATACCACGACCAGCTACAGTATTATaGACGACATATTGTTCACACATTAGTACAGCAGAGATACACACA +
Preference number: 1 (lower is better)
Translates to: TLTECIDIPRPATVL*TTYCSHISTAEIHT
Trigger: TGTGTGTATCTCTGCTGTACTAATGTGTGAACAATATGTCGTGCATAATACTGTAGCTGGTCGTGGTATGTCAATACATTCTGTGAGTGT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR CCA 90 bp TATTTATCCTCTCCAAATTTCATGTTGAAATTTGGAGGTGGGGTCTaGTGGGAGGTGTTTTGGTTTACTCAGCCAAAGAATTTAGCTTCT +
Preference number: 1 (lower is better)
Translates to: YLSSPNFMLKFGGGV*WEVFWFTQPKNLAS
Trigger: AGAAGCTAAATTCTTTGGCTGAGTAAACCAAAACACCTCCCACCAGACCCCACCTCCAAATTTCAACATGAAATTTGGAGAGGATAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR TCA 90 bp ATCCATCTTCATTTATGTCCTTGGTCATTGCAAACCCAGCTTATTTaGTTTCTGCAGCCAAGGAGAATTGTTTTCTTTCCAAGAGTAGGA +
Preference number: 1 (lower is better)
Translates to: IHLHLCPWSLQTQLI*FLQPRRIVFFPRVG
Trigger: TCCTACTCTTGGAAAGAAAACAATTCTCCTTGGCTGCAGAAATCAAATAAGCTGGGTTTGCAATGACCAAGGACATAAATGAAGATGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR TCA 90 bp CCATTCTGGCCACCACAAGTCATTTCACCAAGGTCCAAGGTTATTTaGATGTTGTTTATAATTATCATCACGTTTACTTACCTAACAGCC +
Preference number: 1 (lower is better)
Translates to: PFWPPQVISPRSKVI*MLFIIIITFTYLTA
Trigger: GGCTGTTAGGTAAGTAAACGTGATGATAATTATAAACAACATTCAAATAACCTTGGACCTTGGTGAAATGACTTGTGGTGGCCAGAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR TCA 90 bp AATAGAAAACTGATCACTCAGACTGTACACACTCACAGAATGTATTaGCATACCACGACCAGCTACAGTATTATGCACGACATATTGTTC +
Preference number: 1 (lower is better)
Translates to: NRKLITQTVHTHRMY*HTTTSYSIMHDILF
Trigger: GAACAATATGTCGTGCATAATACTGTAGCTGGTCGTGGTATGTCAATACATTCTGTGAGTGTGTACAGTCTGAGTGATCAGTTTTCTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR CCA 90 bp ATTTGGATATTTATCCTCTCCAAATTTCATGTTGAAATTTGGAGGTaGGGTCTGGTGGGAGGTGTTTTGGTTTACTCAGCCAAAGAATTT +
Preference number: 1 (lower is better)
Translates to: IWIFILSKFHVEIWR*GLVGGVLVYSAKEF
Trigger: AAATTCTTTGGCTGAGTAAACCAAAACACCTCCCACCAGACCCCACCTCCAAATTTCAACATGAAATTTGGAGAGGATAAATATCCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR CCA 90 bp GAAATAATTTGGATATTTATCCTCTCCAAATTTCATGTTGAAATTTaGAGGTGGGGTCTGGTGGGAGGTGTTTTGGTTTACTCAGCCAAA +
Preference number: 1 (lower is better)
Translates to: EIIWIFILSKFHVEI*RWGLVGGVLVYSAK
Trigger: TTTGGCTGAGTAAACCAAAACACCTCCCACCAGACCCCACCTCCAAATTTCAACATGAAATTTGGAGAGGATAAATATCCAAATTATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR TCA 90 bp CACCAGAAATCTCTGCAAGCACTTTCAGCTTCCATCCAGACAATTTaGATTTCAACTATGTTAGACCTCTGTGATATATTTAGAAAAACC +
Preference number: 1 (lower is better)
Translates to: HQKSLQALSASIQTI*ISTMLDLCDIFRKT
Trigger: GGTTTTTCTAAATATATCACAGAGGTCTAACATAGTTGAAATTCAAATTGTCTGGATGGAAGCTGAAAGTGCTTGCAGAGATTTCTGGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR TCA 90 bp TGCACACTTTTGTTGGCTTTATTCATGTATGTACATATGCCTGCCTaGATACAGAAATTGGCCTTTAAATGGGATACGACAAGTTATTTT +
Preference number: 1 (lower is better)
Translates to: CTLLLALFMYVHMPA*IQKLAFKWDTTSYF
Trigger: AAAATAACTTGTCGTATCCCATTTAAAGGCCAATTTCTGTATTCAGGCAGGCATATGTACATACATGAATAAAGCCAACAAAAGTGTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR TCA 90 bp TTAACTGGTTGGAATTATGATAAGCTGACAAATCTTGTTCAGAGTTaGCACTTGCCAGCTAATGATTCTAATGTTGTTAGAATCCACACA +
Preference number: 1 (lower is better)
Translates to: LTGWNYDKLTNLVQS*HLPANDSNVVRIHT
Trigger: TGTGTGGATTCTAACAACATTAGAATCATTAGCTGGCAAGTGTCAACTCTGAACAAGATTTGTCAGCTTATCATAATTCCAACCAGTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR CCA 90 bp TTCCAGGAAGAAAGCAGAAACTATGCCTTTGCTTATTTTATCCTGTaGGTTACAGTCAGTCTTCATAAAGCAAACCATCATTATATAATG +
Preference number: 1 (lower is better)
Translates to: FQEESRNYAFAYFIL*VTVSLHKANHHYIM
Trigger: CATTATATAATGATGGTTTGCTTTATGAAGACTGACTGTAACCCACAGGATAAAATAAGCAAAGGCATAGTTTCTGCTTTCTTCCTGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR-3UTR TCA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACCCTGGCAGAGGCATCTaGGACAGAAGTGACACGAAC +
Preference number: 2 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYPGRGI*DRSDTN
Trigger: GTTCGTGTCACTTCTGTCTCAGATGCCTCTGCCAGG...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR-3UTR GCA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACCACAGAGATGCGCCTTaGCTTCAGTGCAGGAAAATG +
Preference number: 2 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYHRDAP*LQCRKM
Trigger: CATTTTCCTGCACTGAAGGCAAGGCGCATCTCTGTG...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR-3UTR CCA 90 bp CGGGGAATGAGTTCAAAGAAGACAACCGGTGCCCCTCCAGCATCTAAGTCTGGTGACACACGTCTCTTCTaGAGACACGGGAGGGCCAAG +
Preference number: 2 (lower is better)
Translates to: RGMSSKKTTGAPPASKSGDTRLF*RHGRAK
Trigger: CTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTC...ACCAGACTTAGATGCTGGAGGGGCACCGGTTGTCTTCTTTGAACTCATTCCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR CAA 90 bp ACTACCCCAATTCTCAAGGCGATGCTGCTCATCCAGGCCAGTGCCTaGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGA +
Preference number: 2 (lower is better)
Translates to: TTPILKAMLLIQASA*EDTHVSRDTRLFWR
Trigger: TCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACTGGCCTGGATGAGCAGCATCGCCTTGAGAATTGGGGTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR-3UTR GCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGTCAGAATCACAGAGATaGGCCTTGCCTTCAGTGCAG +
Preference number: 2 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGSESQR*ALPSVQ
Trigger: CTGCACTGAAGGCAAGGCGCATCTCTGTGATTCTGA...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR-3UTR GCA 90 bp GACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGTATAATCTCAGAATCACAGAGATaGGCCTTGCCTTCAGTGCAG +
Preference number: 2 (lower is better)
Translates to: DTRLFWRHGRAKVPGSIISESQR*ALPSVQ
Trigger: CTGCACTGAAGGCAAGGCGCATCTCTGTGATTCTGA...GATTATACTTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR-3UTR GCA 90 bp AATGCAGGGACAGCCTGTTCTAGCCACTTTACAGCAGAGGATTACCTGGGGCCAGCTCATCCAGGCCAGTaGCTTGGAGGATACTCATGT +
Preference number: 2 (lower is better)
Translates to: NAGTACSSHFTAEDYLGPAHPGQ*LGGYSC
Trigger: ACATGAGTATCCTCCAAGGCACTGGCCTGGATGAGC...TGGCCCCAGGTAATCCTCTGCTGTAAAGTGGCTAGAACAGGCTGTCCCTGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR-3UTR GCA 90 bp CGGGGAATGAGTTCAAAGAAGACAACCGGTGCCCCTCCAGCATCTAAGTCTGGTGCTCATCCAGGCCAGTaGCTTGGAGGATACTCATGT +
Preference number: 2 (lower is better)
Translates to: RGMSSKKTTGAPPASKSGAHPGQ*LGGYSC
Trigger: ACATGAGTATCCTCCAAGGCACTGGCCTGGATGAGC...ACCAGACTTAGATGCTGGAGGGGCACCGGTTGTCTTCTTTGAACTCATTCCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR-3UTR CCA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACTTTCTAAACGCAAAATaGAGACCAGCACTCCCCCAA +
Preference number: 2 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYFLNAK*RPALPQ
Trigger: TTGGGGGAGTGCTGGTCTCCATTTTGCGTTTAGAAA...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR-3UTR CCA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGTCCAGGCCAGTGCCTTaGAGGATACTCATGTGTCTC +
Preference number: 2 (lower is better)
Translates to: GPLFILPFHTTPILKAMLSRPVP*RILMCL
Trigger: GAGACACATGAGTATCCTCCAAGGCACTGGCCTGGA...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR CAA 90 bp TTAGATGGTGGTCACAGAGCCCTCATGAGTGAGATTAGTGCCCTTTaGAAAGTGGCCCGGGAGGGGACACTTCATCCCTTTTACTGTGTG +
Preference number: 2 (lower is better)
Translates to: LDGGHRALMSEISAL*KVAREGTLHPFYCV
Trigger: CACACAGTAAAAGGGATGAAGTGTCCCCTCCCGGGCCACTTTCAAAAGGGCACTAATCTCACTCATGAGGGCTCTGTGACCACCATCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR CAA 90 bp AGCATATCCTCTGTTATTTGCCAGGTGGCAGCAGCTGACCCGAATTaGGAGAGAATCAACCAAAAAGGGCCACGCACAACATCAGGAAGC +
Preference number: 2 (lower is better)
Translates to: SISSVICQVAAADPN*ERINQKGPRTTSGS
Trigger: GCTTCCTGATGTTGTGCGTGGCCCTTTTTGGTTGATTCTCTCCAAATTCGGGTCAGCTGCTGCCACCTGGCAAATAACAGAGGATATGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR-3UTR TCA 90 bp AATGCAGGGACAGCCTGTTCTAGCCACTTTACAGCAGAGGATTACCTGGGGCCAAAACTAAGCAAGCTTTaGCATAGAGGGACGCATGTG +
Preference number: 2 (lower is better)
Translates to: NAGTACSSHFTAEDYLGPKLSKL*HRGTHV
Trigger: CACATGCGTCCCTCTATGTCAAAGCTTGCTTAGTTT...TGGCCCCAGGTAATCCTCTGCTGTAAAGTGGCTAGAACAGGCTGTCCCTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR-3UTR TCA 90 bp AATGCAGGGACAGCCTGTTCTAGCCACTTTACAGCAGAGGATTACCTGGGGCCACATCTGAGACAGAAGTaGCACGAACACAACTACAAA +
Preference number: 2 (lower is better)
Translates to: NAGTACSSHFTAEDYLGPHLRQK*HEHNYK
Trigger: TTTGTAGTTGTGTTCGTGTCACTTCTGTCTCAGATG...TGGCCCCAGGTAATCCTCTGCTGTAAAGTGGCTAGAACAGGCTGTCCCTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR-3UTR GCA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCTCCCCCAACAATATCTaGAGGAAGGGAAGGCTTCCC +
Preference number: 2 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLSPNNI*RKGRLP
Trigger: GGGAAGCCTTCCCTTCCTGCAGATATTGTTGGGGGA...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR-3UTR CCA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACAAATATGAATATGTCTaGTCAGAATCACAGAGATGC +
Preference number: 2 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYKYEYV*SESQRC
Trigger: GCATCTCTGTGATTCTGACCAGACATATTCATATTT...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR-3UTR CCA 90 bp ACCAAGAATAAATGTTTAAGTATGCAAGAGTTAGAGAATGGCAGCCACAGGGCACCCTGTCTCCCAGGCTaGAGTGCAATGGCGCGAACT +
Preference number: 2 (lower is better)
Translates to: TKNKCLSMQELENGSHRAPCLPG*SAMART
Trigger: AGTTCGCGCCATTGCACTCCAGCCTGGGAGACAGGG...TGCCCTGTGGCTGCCATTCTCTAACTCTTGCATACTTAAACATTTATTCTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR-3UTR CCA 90 bp ACCAAGAATAAATGTTTAAGTATGCAAGAGTTAGAGAATGGCAGCCACAGGGCACAGCAAGACTTTGAGTaGCTCCTCTTCCCTCTGGGC +
Preference number: 2 (lower is better)
Translates to: TKNKCLSMQELENGSHRAQQDFE*LLFPLG
Trigger: GCCCAGAGGGAAGAGGAGCCACTCAAAGTCTTGCTG...TGCCCTGTGGCTGCCATTCTCTAACTCTTGCATACTTAAACATTTATTCTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR-3UTR CCA 90 bp CGGGGAATGAGTTCAAAGAAGACAACCGGTGCCCCTCCAGCATCTAAGTCTGGTGACTACATTTGTTACTaGAAGTTACTGAACCCAATT +
Preference number: 2 (lower is better)
Translates to: RGMSSKKTTGAPPASKSGDYICY*KLLNPI
Trigger: AATTGGGTTCAGTAACTTCCAGTAACAAATGTAGTC...ACCAGACTTAGATGCTGGAGGGGCACCGGTTGTCTTCTTTGAACTCATTCCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR CAA 90 bp GAGCCGGCAAGTAGGCCCTCACCAGACACCAAATTGGCCTTGATTTaGGGGTTCCCAGCTTCCAAAACTGTAAGAAATAAATTTATTTAC +
Preference number: 2 (lower is better)
Translates to: EPASRPSPDTKLALI*GFPASKTVRNKFIY
Trigger: GTAAATAAATTTATTTCTTACAGTTTTGGAAGCTGGGAACCCCAAAATCAAGGCCAATTTGGTGTCTGGTGAGGGCCTACTTGCCGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR-3UTR TCA 90 bp TTTTGTGACAATCTCTTGAGTGTTGTAGAAGTGAAGAATTTGGTCCCAGCACCACCAGAACAGATACTGTaGATTGACTGTACCCACGGG +
Preference number: 2 (lower is better)
Translates to: FCDNLLSVVEVKNLVPAPPEQIL*IDCTHG
Trigger: CCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGG...TGGTGCTGGGACCAAATTCTTCACTTCTACAACACTCAAGAGATTGTCACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR-3UTR CCA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGAAATATGAATATGTCTaGTCAGAATCACAGAGATGC +
Preference number: 2 (lower is better)
Translates to: GPLFILPFHTTPILKAMLKYEYV*SESQRC
Trigger: GCATCTCTGTGATTCTGACCAGACATATTCATATTT...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR-3UTR GCA 90 bp CTTTCTAACATCATTAAATCACTGGGGTATCTCATCATAATTATCACCATGCAGTTCTCAAGGCGATGCTaGTCATCCAGGCCAGTGCCT +
Preference number: 2 (lower is better)
Translates to: LSNIIKSLGYLIIIITMQFSRRC*SSRPVP
Trigger: AGGCACTGGCCTGGATGAGCAGCATCGCCTTGAGAA...CTGCATGGTGATAATTATGATGAGATACCCCAGTGATTTAATGATGTTAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR-3UTR CCA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCTCAGTAGAATATCACTaGAGAACACCTGCACAGTAT +
Preference number: 2 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLSVEYH*RTPAQY
Trigger: ATACTGTGCAGGTGTTCTCCAGTGATATTCTACTGA...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR-3UTR CCA 90 bp TTTTGTGACAATCTCTTGAGTGTTGTAGAAGTGAAGAATTTGGTCCCAGCACCATTTCTAAACGCAAAATaGAGACCAGCACTCCCCCAA +
Preference number: 2 (lower is better)
Translates to: FCDNLLSVVEVKNLVPAPFLNAK*RPALPQ
Trigger: TTGGGGGAGTGCTGGTCTCCATTTTGCGTTTAGAAA...TGGTGCTGGGACCAAATTCTTCACTTCTACAACACTCAAGAGATTGTCACAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR CAA 90 bp TGGGAGACAGAATTTTTCCACTTCAATCCATCTTCATTTATGTCCTaGGTCATTGCAAACCCAGCTTATTTGATTTCTGCAGCCAAGGAG +
Preference number: 2 (lower is better)
Translates to: WETEFFHFNPSSFMS*VIANPAYLISAAKE
Trigger: CTCCTTGGCTGCAGAAATCAAATAAGCTGGGTTTGCAATGACCAAGGACATAAATGAAGATGGATTGAAGTGGAAAAATTCTGTCTCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR CAA 90 bp CACTGGAGAACACCTGCACAGTATCAATTTAGTATTATCCCTAATTaGATGGCTCTTTTCAAGAATTCAGTCCCATGTACTTCCTCTAGG +
Preference number: 2 (lower is better)
Translates to: HWRTPAQYQFSIIPN*MALFKNSVPCTSSR
Trigger: CCTAGAGGAAGTACATGGGACTGAATTCTTGAAAAGAGCCATCAAATTAGGGATAATACTAAATTGATACTGTGCAGGTGTTCTCCAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR-3UTR TCA 90 bp CTTTCTAACATCATTAAATCACTGGGGTATCTCATCATAATTATCACCATGCAGGCTCATTACGGGGAATaGGTTCAAAGAAGACAACCG +
Preference number: 2 (lower is better)
Translates to: LSNIIKSLGYLIIIITMQAHYGE*VQRRQP
Trigger: CGGTTGTCTTCTTTGAACTCATTCCCCGTAATGAGC...CTGCATGGTGATAATTATGATGAGATACCCCAGTGATTTAATGATGTTAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR-3UTR TCA 90 bp CTTTCTAACATCATTAAATCACTGGGGTATCTCATCATAATTATCACCATGCAGAAACTAAGCAAGCTTTaGCATAGAGGGACGCATGTG +
Preference number: 2 (lower is better)
Translates to: LSNIIKSLGYLIIIITMQKLSKL*HRGTHV
Trigger: CACATGCGTCCCTCTATGTCAAAGCTTGCTTAGTTT...CTGCATGGTGATAATTATGATGAGATACCCCAGTGATTTAATGATGTTAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR-3UTR CCA 90 bp ACCAAGAATAAATGTTTAAGTATGCAAGAGTTAGAGAATGGCAGCCACAGGGCATTAAGCCCATGTGTCTaGACAGATGACATTTGTAAT +
Preference number: 2 (lower is better)
Translates to: TKNKCLSMQELENGSHRALSPCV*TDDICN
Trigger: ATTACAAATGTCATCTGTCCAGACACATGGGCTTAA...TGCCCTGTGGCTGCCATTCTCTAACTCTTGCATACTTAAACATTTATTCTTGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR CAA 90 bp TTGTTGCTGCTATCTACACATATATACAGATGCACTGGATTTATTTaGAGAGAGGTTATTTTGTTGTGGCAAGTGAGTAGTTTAGCTGGT +
Preference number: 2 (lower is better)
Translates to: LLLLSTHIYRCTGFI*REVILLWQVSSLAG
Trigger: ACCAGCTAAACTACTCACTTGCCACAACAAAATAACCTCTCTCAAAATAAATCCAGTGCATCTGTATATATGTGTAGATAGCAGCAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR-3UTR TCA 90 bp CTTTCTAACATCATTAAATCACTGGGGTATCTCATCATAATTATCACCATGCAGGGGATGTTTGACTTCTaGTTTCACCATGTACACAAA +
Preference number: 2 (lower is better)
Translates to: LSNIIKSLGYLIIIITMQGMFDF*FHHVHK
Trigger: TTTGTGTACATGGTGAAATCAGAAGTCAAACATCCC...CTGCATGGTGATAATTATGATGAGATACCCCAGTGATTTAATGATGTTAGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR-3UTR GCA 90 bp CTTTCTAACATCATTAAATCACTGGGGTATCTCATCATAATTATCACCATGCAGTGTGCCCATAATAGATaGATTTGCTGGTATAACTGC +
Preference number: 2 (lower is better)
Translates to: LSNIIKSLGYLIIIITMQCAHNR*ICWYNC
Trigger: GCAGTTATACCAGCAAATGCATCTATTATGGGCACA...CTGCATGGTGATAATTATGATGAGATACCCCAGTGATTTAATGATGTTAGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR-3UTR CCA 90 bp AGGCCTCTTCTTTCATTGGGTTTGAAGGATATTATGGGTATTTCTCTTAAAATCTCAGTAGAATATCACTaGAGAACACCTGCACAGTAT +
Preference number: 2 (lower is better)
Translates to: RPLLSLGLKDIMGISLKISVEYH*RTPAQY
Trigger: ATACTGTGCAGGTGTTCTCCAGTGATATTCTACTGA...GATTTTAAGAGAAATACCCATAATATCCTTCAAACCCAATGAAAGAAGAGGCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR TCA 72 bp TGGCCCGGGAGGGGACACTTCATCCCTTTTACTGTGTaGGGACACAGCAAACAGGCACCACACGTGAGCCGG +
Preference number: 3 (lower is better)
Translates to: WPGRGHFIPFTV*GHSKQAPHVSR
Trigger: CCGGCTCACGTGTGGTGCCTGTTTGCTGTGTCCTCACACAGTAAAAGGGATGAAGTGTCCCCTCCCGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR GCA 72 bp CCCAATTCTCAAGGCGATGCTGCTCATCCAGGCCAGTaGCTTGGAGGATACTCATGTGTCTCGGGACACACG +
Preference number: 3 (lower is better)
Translates to: PNSQGDAAHPGQ*LGGYSCVSGHT
Trigger: CGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACTGGCCTGGATGAGCAGCATCGCCTTGAGAATTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR TCA 72 bp GATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTaGCAGCTGCTACTGTGTACACAGGCTGTACTCTGT +
Preference number: 3 (lower is better)
Translates to: DYLGPPIWSRPC*QLLLCTQAVLC
Trigger: ACAGAGTACAGCCTGTGTACACAGTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR CCA 72 bp GAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTaGAGACACGGGAGGGCCAAGGTCCCAGGAAGTATA +
Preference number: 3 (lower is better)
Translates to: EDTHVSRDTRLF*RHGRAKVPGSI
Trigger: TATACTTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR CCA 72 bp TTCTCAAGGCGATGCTGCTCATCCAGGCCAGTGCCTTaGAGGATACTCATGTGTCTCGGGACACACGTCTCT +
Preference number: 3 (lower is better)
Translates to: FSRRCCSSRPVP*RILMCLGTHVS
Trigger: AGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACTGGCCTGGATGAGCAGCATCGCCTTGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR GCA 72 bp ACGCAAAATGGAGACCAGCACTCCCCCAACAATATCTaGAGGAAGGGAAGGCTTCCCAGGGCCGTTGTTCAT +
Preference number: 3 (lower is better)
Translates to: TQNGDQHSPNNI*RKGRLPRAVVH
Trigger: ATGAACAACGGCCCTGGGAAGCCTTCCCTTCCTGCAGATATTGTTGGGGGAGTGCTGGTCTCCATTTTGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR TCA 72 bp AAGGCGATGGTGTTAGAAAGTGGGGGCTTTGGGTGGTaGTTAGATGGTGGTCACAGAGCCCTCATGAGTGAG +
Preference number: 3 (lower is better)
Translates to: KAMVLESGGFGW*LDGGHRALMSE
Trigger: CTCACTCATGAGGGCTCTGTGACCACCATCTAATCACCACCCAAAGCCCCCACTTTCTAACACCATCGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR GCA 72 bp TTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTaGTCATCCAGGCCAGTGCCTTGGAGGATACTCATG +
Preference number: 3 (lower is better)
Translates to: FLSTLPQFSRRC*SSRPVPWRILM
Trigger: CATGAGTATCCTCCAAGGCACTGGCCTGGATGAGCAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR GCA 72 bp TTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATaGTGCTCATCCAGGCCAGTGCCTTGGAGGATACTC +
Preference number: 3 (lower is better)
Translates to: FFLSTLPQFSRR*CSSRPVPWRIL
Trigger: GAGTATCCTCCAAGGCACTGGCCTGGATGAGCAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR-3UTR CAA 90 bp CGGGGAATGAGTTCAAAGAAGACAACCGGTGCCCCTCCAGCATCTAAGTCTGGTTCACAGAGATGCGCCTaGCCTTCAGTGCAGGAAAAT +
Preference number: 3 (lower is better)
Translates to: RGMSSKKTTGAPPASKSGSQRCA*PSVQEN
Trigger: ATTTTCCTGCACTGAAGGCAAGGCGCATCTCTGTGA...ACCAGACTTAGATGCTGGAGGGGCACCGGTTGTCTTCTTTGAACTCATTCCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR-3UTR CAA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGATCCAGGCCAGTGCCTaGGAGGATACTCATGTGTCT +
Preference number: 3 (lower is better)
Translates to: GPLFILPFHTTPILKAMLIQASA*EDTHVS
Trigger: AGACACATGAGTATCCTCCAAGGCACTGGCCTGGAT...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR GCA 72 bp TGGCTGGGCTTTCCATCTCCTTCTAGGAATCCAGACTaGAGGATCCCAGTTTATCTTCTCAGGAGTAGGCAG +
Preference number: 3 (lower is better)
Translates to: WLGFPSPSRNPD*RIPVYLLRSRQ
Trigger: CTGCCTACTCCTGAGAAGATAAACTGGGATCCTGCAGTCTGGATTCCTAGAAGGAGATGGAAAGCCCAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR-3UTR CAA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGAGGCCTCTTCTTTCATaGGGTTTGAAGGATATTATG +
Preference number: 3 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGRPLLS*GLKDIM
Trigger: CATAATATCCTTCAAACCCAATGAAAGAAGAGGCCT...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR CCA 72 bp CTGTTATTTGCCAGGTGGCAGCAGCTGACCCGAATTTaGAGAGAATCAACCAAAAAGGGCCACGCACAACAT +
Preference number: 3 (lower is better)
Translates to: LLFARWQQLTRI*RESTKKGHAQH
Trigger: ATGTTGTGCGTGGCCCTTTTTGGTTGATTCTCTCCAAATTCGGGTCAGCTGCTGCCACCTGGCAAATAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR CCA 72 bp ACAGGAGATTCAGCATATCCTCTGTTATTTGCCAGGTaGCAGCAGCTGACCCGAATTTGGAGAGAATCAACC +
Preference number: 3 (lower is better)
Translates to: TGDSAYPLLFAR*QQLTRIWREST
Trigger: GGTTGATTCTCTCCAAATTCGGGTCAGCTGCTGCCACCTGGCAAATAACAGAGGATATGCTGAATCTCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR-3UTR CAA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCTCACAGAGATGCGCCTaGCCTTCAGTGCAGGAAAAT +
Preference number: 3 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLSQRCA*PSVQEN
Trigger: ATTTTCCTGCACTGAAGGCAAGGCGCATCTCTGTGA...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR-3UTR CAA 90 bp AATGCAGGGACAGCCTGTTCTAGCCACTTTACAGCAGAGGATTACCTGGGGCCATTCAATTTGTTAAGGTaGCAAACCTTCAGTGAAGCT +
Preference number: 3 (lower is better)
Translates to: NAGTACSSHFTAEDYLGPFNLLR*QTFSEA
Trigger: AGCTTCACTGAAGGTTTGCAACCTTAACAAATTGAA...TGGCCCCAGGTAATCCTCTGCTGTAAAGTGGCTAGAACAGGCTGTCCCTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR GCA 72 bp CCCTGTAGCTACTCAGTTACCAGTCTGTGCTTCAGTTaGTGGAGTTTTCTAAGCACAAAATCTGCTACCAGG +
Preference number: 3 (lower is better)
Translates to: PCSYSVTSLCFS*WSFLSTKSATR
Trigger: CCTGGTAGCAGATTTTGTGCTTAGAAAACTCCAGCAACTGAAGCACAGACTGGTAACTGAGTAGCTACAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR CCA 72 bp GTTTTACTACTGGTCAAGTCAAACTGGGGATATGGCTaGGCTTTCCATCTCCTTCTAGGAATCCAGACTGCA +
Preference number: 3 (lower is better)
Translates to: VLLLVKSNWGYG*AFHLLLGIQTA
Trigger: TGCAGTCTGGATTCCTAGAAGGAGATGGAAAGCCCAGCCATATCCCCAGTTTGACTTGACCAGTAGTAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR CCA 72 bp GCTAGTTTTACTACTGGTCAAGTCAAACTGGGGATATaGCTGGGCTTTCCATCTCCTTCTAGGAATCCAGAC +
Preference number: 3 (lower is better)
Translates to: ASFTTGQVKLGI*LGFPSPSRNPD
Trigger: GTCTGGATTCCTAGAAGGAGATGGAAAGCCCAGCCATATCCCCAGTTTGACTTGACCAGTAGTAAAACTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR TCA 72 bp CAAGAGTTAGAGAGATTATGTCCTGGCAGAGGCATCTaGGACAGAAGTGACACGAACACAACTACAAATGGG +
Preference number: 3 (lower is better)
Translates to: QELERLCPGRGI*DRSDTNTTTNG
Trigger: CCCATTTGTAGTTGTGTTCGTGTCACTTCTGTCTCAGATGCCTCTGCCAGGACATAATCTCTCTAACTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR TCA 72 bp AAATGTCTGTATCCCTCCAAAACTCATGTTGAAGTCTaGACTCCTAAGGCGATGGTGTTAGAAAGTGGGGGC +
Preference number: 3 (lower is better)
Translates to: KCLYPSKTHVEV*TPKAMVLESGG
Trigger: GCCCCCACTTTCTAACACCATCGCCTTAGGAGTTCAGACTTCAACATGAGTTTTGGAGGGATACAGACATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR GCA 72 bp ACAACACACACACAACGCACAAACACACACACACTCTaGTCTACCAAGTACAGGAAAAACCTCGCGTTTGAT +
Preference number: 3 (lower is better)
Translates to: TTHTQRTNTHTL*STKYRKNLAFD
Trigger: ATCAAACGCGAGGTTTTTCCTGTACTTGGTAGAGCAGAGTGTGTGTGTGTTTGTGCGTTGTGTGTGTGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR TCA 72 bp TCTCCATTTCAACAAAACTTCTGGTTGCAGCTGTCTTaGGTTTTAAGCCAGCAAGACTTTGAGTGGCTCCTC +
Preference number: 3 (lower is better)
Translates to: SPFQQNFWLQLS*VLSQQDFEWLL
Trigger: GAGGAGCCACTCAAAGTCTTGCTGGCTTAAAACTCAAGACAGCTGCAACCAGAAGTTTTGTTGAAATGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR CCA 72 bp CTGGAAACGGCACCTAATGAAACAAACACCCACTGGTaGGACATAAACAGCTATAGGCATAAGACAAACCAT +
Preference number: 3 (lower is better)
Translates to: LETAPNETNTHW*DINSYRHKTNH
Trigger: ATGGTTTGTCTTATGCCTATAGCTGTTTATGTCCCACCAGTGGGTGTTTGTTTCATTAGGTGCCGTTTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR TCA 72 bp ACAGCTAAAGCTGGTAATCCTCTGGGCAGAGTTAACTaGATTGCTTTCTACATGCTAGTGTCCAGAAAGAGT +
Preference number: 3 (lower is better)
Translates to: TAKAGNPLGRVN*IAFYMLVSRKS
Trigger: ACTCTTTCTGGACACTAGCATGTAGAAAGCAATTCAGTTAACTCTGCCCAGAGGATTACCAGCTTTAGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR GCA 72 bp ATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTaGCTTCAGTGCAGGAAAATGGGTCTATATAAATCC +
Preference number: 3 (lower is better)
Translates to: MNMSGQNHRDAP*LQCRKMGLYKS
Trigger: GGATTTATATAGACCCATTTTCCTGCACTGAAGGCAAGGCGCATCTCTGTGATTCTGACCAGACATATTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR CCA 72 bp TGTACTTCCTCTAGGGTAAGAAAATATGAATATGTCTaGTCAGAATCACAGAGATGCGCCTTGCCTTCAGTG +
Preference number: 3 (lower is better)
Translates to: CTSSRVRKYEYV*SESQRCALPSV
Trigger: CACTGAAGGCAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGAGGAAGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR CCA 72 bp ATGTATACATTATACCTCCTAAGGTTGAGACATAGATaGAAGTGCCCAGCAAAACGTCTGGCACAAAGGCAT +
Preference number: 3 (lower is better)
Translates to: MYTLYLLRLRHR*KCPAKRLAQRH
Trigger: ATGCCTTTGTGCCAGACGTTTTGCTGGGCACTTCCATCTATGTCTCAACCTTAGGAGGTATAATGTATACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR-3UTR CAA 90 bp ACCAAGAATAAATGTTTAAGTATGCAAGAGTTAGAGAATGGCAGCCACAGGGCACCACCCAAGGGTTCATaGCTCATATCCTATTATCTC +
Preference number: 3 (lower is better)
Translates to: TKNKCLSMQELENGSHRAPPKGS*LISYYL
Trigger: GAGATAATAGGATATGAGCAATGAACCCTTGGGTGG...TGCCCTGTGGCTGCCATTCTCTAACTCTTGCATACTTAAACATTTATTCTTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR GCA 72 bp AGAAAATATGAATATGTCTGGTCAGAATCACAGAGATaGGCCTTGCCTTCAGTGCAGGAAAATGGGTCTATA +
Preference number: 3 (lower is better)
Translates to: RKYEYVWSESQR*ALPSVQENGSI
Trigger: TATAGACCCATTTTCCTGCACTGAAGGCAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR GCA 72 bp ACATTATACCTCCTAAGGTTGAGACATAGATGGAAGTaGCCAGCAAAACGTCTGGCACAAAGGCATTATTTT +
Preference number: 3 (lower is better)
Translates to: TLYLLRLRHRWK*PAKRLAQRHYF
Trigger: AAAATAATGCCTTTGTGCCAGACGTTTTGCTGGGCACTTCCATCTATGTCTCAACCTTAGGAGGTATAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR CCA 72 bp CTACTCAACATTGAAGATGTGAAGAATGAGAACATTTaGCTGGAAACGGCACCTAATGAAACAAACACCCAC +
Preference number: 3 (lower is better)
Translates to: LLNIEDVKNENI*LETAPNETNTH
Trigger: GTGGGTGTTTGTTTCATTAGGTGCCGTTTCCAGCCAAATGTTCTCATTCTTCACATCTTCAATGTTGAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR TCA 72 bp TTAAAAGTAGCTGTAATGACCTCTGGCAGATGTCACTaGTCACTTGGGAGACAGAATTTTTCCACTTCAATC +
Preference number: 3 (lower is better)
Translates to: LKVAVMTSGRCH*SLGRQNFSTSI
Trigger: GATTGAAGTGGAAAAATTCTGTCTCCCAAGTGATCAGTGACATCTGCCAGAGGTCATTACAGCTACTTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR GCA 72 bp GAATGTATTGACATACCACGACCAGCTACAGTATTATaGACGACATATTGTTCACACATTAGTACAGCAGAG +
Preference number: 3 (lower is better)
Translates to: ECIDIPRPATVL*TTYCSHISTAE
Trigger: CTCTGCTGTACTAATGTGTGAACAATATGTCGTGCATAATACTGTAGCTGGTCGTGGTATGTCAATACATTC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR-3UTR CAA 90 bp TTTTGTGACAATCTCTTGAGTGTTGTAGAAGTGAAGAATTTGGTCCCAGCACCATTCAATTTGTTAAGGTaGCAAACCTTCAGTGAAGCT +
Preference number: 3 (lower is better)
Translates to: FCDNLLSVVEVKNLVPAPFNLLR*QTFSEA
Trigger: AGCTTCACTGAAGGTTTGCAACCTTAACAAATTGAA...TGGTGCTGGGACCAAATTCTTCACTTCTACAACACTCAAGAGATTGTCACAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR-3UTR CAA 90 bp CTTTCTAACATCATTAAATCACTGGGGTATCTCATCATAATTATCACCATGCAGGCAGCTGACCCGAATTaGGAGAGAATCAACCAAAAA +
Preference number: 3 (lower is better)
Translates to: LSNIIKSLGYLIIIITMQAADPN*ERINQK
Trigger: TTTTTGGTTGATTCTCTCCAAATTCGGGTCAGCTGC...CTGCATGGTGATAATTATGATGAGATACCCCAGTGATTTAATGATGTTAGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR TCA 72 bp GGGATTGGGGAGTATGACTATAATACTGCAATCTCCTaGTATACCAGCATCATTTTAAGACACGATGGAAAA +
Preference number: 3 (lower is better)
Translates to: GIGEYDYNTAIS*YTSIILRHDGK
Trigger: TTTTCCATCGTGTCTTAAAATGATGCTGGTATATCAGGAGATTGCAGTATTATAGTCATACTCCCCAATCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR GCA 72 bp CAAGTTTTTCCAGGAAGAAAGCAGAAACTATGCCTTTaGTTATTTTATCCTGTGGGTTACAGTCAGTCTTCA +
Preference number: 3 (lower is better)
Translates to: QVFPGRKQKLCL*LFYPVGYSQSS
Trigger: TGAAGACTGACTGTAACCCACAGGATAAAATAAGCAAAGGCATAGTTTCTGCTTTCTTCCTGGAAAAACTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR GCA 72 bp AAAAAGTTCTTTCATTGCAAATACTTCCAGTTCCACTaGAGATTCCTAGCAGAAGCTGTCACATGGAAAATC +
Preference number: 3 (lower is better)
Translates to: KKFFHCKYFQFH*RFLAEAVTWKI
Trigger: GATTTTCCATGTGACAGCTTCTGCTAGGAATCTGCAGTGGAACTGGAAGTATTTGCAATGAAAGAACTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR CCA 72 bp CTGACCAGAACCTTAGCATTCTCAGTAGAATATCACTaGAGAACACCTGCACAGTATCAATTTAGTATTATC +
Preference number: 3 (lower is better)
Translates to: LTRTLAFSVEYH*RTPAQYQFSII
Trigger: GATAATACTAAATTGATACTGTGCAGGTGTTCTCCAGTGATATTCTACTGAGAATGCTAAGGTTCTGGTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR TCA 72 bp TTTCCAAATAGAACAACTGTAACAACTCTCAGGCTCTaGGAATACTGTTCCATATATGCAAGCTTTGTCTAC +
Preference number: 3 (lower is better)
Translates to: FPNRTTVTTLRL*EYCSIYASFVY
Trigger: GTAGACAAAGCTTGCATATATGGAACAGTATTCTCAGAGCCTGAGAGTTGTTACAGTTGTTCTATTTGGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR TCA 72 bp GTCTGGACAGATGACATTTGTAATTGCTCAGCCAGTTaGAGAATTTCATTAAGAAGGATATCGTTACAAGGA +
Preference number: 3 (lower is better)
Translates to: VWTDDICNCSAS*RISLRRISLQG
Trigger: TCCTTGTAACGATATCCTTCTTAATGAAATTCTTCAACTGGCTGAGCAATTACAAATGTCATCTGTCCAGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR TCA 72 bp TTGTTGGCTTTATTCATGTATGTACATATGCCTGCCTaGATACAGAAATTGGCCTTTAAATGGGATACGACA +
Preference number: 3 (lower is better)
Translates to: LLALFMYVHMPA*IQKLAFKWDTT
Trigger: TGTCGTATCCCATTTAAAGGCCAATTTCTGTATTCAGGCAGGCATATGTACATACATGAATAAAGCCAACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR TCA 72 bp AGATTCCTAGCAGAAGCTGTCACATGGAAAATCAACTaGTTCTGCACATTCATGGTTAAAAGAACGATTTCA +
Preference number: 3 (lower is better)
Translates to: RFLAEAVTWKIN*FCTFMVKRTIS
Trigger: TGAAATCGTTCTTTTAACCATGAATGTGCAGAATCAGTTGATTTTCCATGTGACAGCTTCTGCTAGGAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR TCA 72 bp CACCTGCACAGTATCAATTTAGTATTATCCCTAATTTaGTGGCTCTTTTCAAGAATTCAGTCCCATGTACTT +
Preference number: 3 (lower is better)
Translates to: HLHSINLVLSLI*WLFSRIQSHVL
Trigger: AAGTACATGGGACTGAATTCTTGAAAAGAGCCATCAAATTAGGGATAATACTAAATTGATACTGTGCAGGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR TCA 72 bp GAAACAAGAGGTATTTTGAGTTCACAATCAGTCCAGTaGAGCAATATTATGCTAAGAAGGATGTTCTTCTGT +
Preference number: 3 (lower is better)
Translates to: ETRGILSSQSVQ*SNIMLRRMFFC
Trigger: ACAGAAGAACATCCTTCTTAGCATAATATTGCTTCACTGGACTGATTGTGAACTCAAAATACCTCTTGTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR TCA 72 bp TCTCTGCAAGCACTTTCAGCTTCCATCCAGACAATTTaGATTTCAACTATGTTAGACCTCTGTGATATATTT +
Preference number: 3 (lower is better)
Translates to: SLQALSASIQTI*ISTMLDLCDIF
Trigger: AAATATATCACAGAGGTCTAACATAGTTGAAATTCAAATTGTCTGGATGGAAGCTGAAAGTGCTTGCAGAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGAGAACCAGCCTGCTCTaGCCGGCTCCGCGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGRTSLL*PAPRRG
Trigger: GCCGCGCCGCGGAGCCGGGCAGAGCAGGCTGGTTCT...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACGCGGCTGGGCCTGCGTaGGCTGGCTTTGACGGAGCG +
Preference number: 4 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYAAGPA*AGFDGA
Trigger: CGCTCCGTCAAAGCCAGCCCACGCAGGCCCAGCCGC...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp TGTCTCGGGACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAATGCAGAACTCGGGGCTaGTGCTGCGGGCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: CLGTHVSSGDTGGPRSQECRTRG*CCGLAA
Trigger: AGCAGCCAGCCCGCAGCATCAGCCCCGAGTTCTGCA...TTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGGCGGCTGGGCCTGCGTaGGCTGGCTTTGACGGAGCG +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGAAGPA*AGFDGA
Trigger: CGCTCCGTCAAAGCCAGCCCACGCAGGCCCAGCCGC...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGCCACTGCCTGCGCTGTaGCGGGGGCTTCCCGTCGCA +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGPLPAL*RGLPVA
Trigger: TGCGACGGGAAGCCCCCGCCACAGCGCAGGCAGTGG...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGCAGCTGCCCTGGGGCTaGGGTCTGGTTCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGQLPWG*GLVLQG
Trigger: CCCCTGCAGAACCAGACCTCAGCCCCAGGGCAGCTG...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGTGGTCGATGCCGAGGTaGGGCAGCCTGTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGWSMPR*GSLWLS
Trigger: GGAGAGCCACAGGCTGCCTCACCTCGGCATCGACCA...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACCTGCTCCCTGGCAGCTaGGGATTGCCGGGAGAGTTG +
Preference number: 4 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYLLPGS*GLPGEL
Trigger: CAACTCTCCCGGCAATCCCCAGCTGCCAGGGAGCAG...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACCAGCGGCACCTTCTCTaGACCTGGGGGACATGCCGA +
Preference number: 4 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYQRHLL*TWGTCR
Trigger: TCGGCATGTCCCCCAGGTCCAGAGAAGGTGCCGCTG...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp TGTCTCGGGACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAACCCACACGACGTCCCTaGCACGCTTGGACTGTTTCA +
Preference number: 4 (lower is better)
Translates to: CLGTHVSSGDTGGPRSQEPTRRP*HAWTVS
Trigger: TGAAACAGTCCAAGCGTGTCAGGGACGTCGTGTGGG...TTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp TGTCTCGGGACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAACACTCGCCACTGCCTaGACCTCCGCATCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: CLGTHVSSGDTGGPRSQETLATA*TSASCQ
Trigger: TTGGCAAGATGCGGAGGTGCAGGCAGTGGCGAGTGT...TTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp TGTCTCGGGACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAATGGTGGAGACGGATCTaGTCTCGACACTCGCCACTG +
Preference number: 4 (lower is better)
Translates to: CLGTHVSSGDTGGPRSQEWWRRI*SRHSPL
Trigger: CAGTGGCGAGTGTCGAGAGCAGATCCGTCTCCACCA...TTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp TGTCTCGGGACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAAGCTCTCTTGAGTACTaGTCCCACTGGTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: CLGTHVSSGDTGGPRSQESSLEY*SHWWGR
Trigger: CCTCCCCCACCAGTGGGACCAGTACTCAAGAGAGCT...TTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGCAGCGGCACCTTCTCTaGACCTGGGGGACATGCCGA +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGQRHLL*TWGTCR
Trigger: TCGGCATGTCCCCCAGGTCCAGAGAAGGTGCCGCTG...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp TGTCTCGGGACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGGCTGGAGTCACCCATaGGATCAGATGGCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: CLGTHVSSGDTGGPRSQEGWSHP*DQMAGS
Trigger: TGAGCCTGCCATCTGATCCCATGGGTGACTCCAGCC...TTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp TGTCTCGGGACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAACTTCTTGCCAGAACCTaGGCTGGAGTCACCCATGGG +
Preference number: 4 (lower is better)
Translates to: CLGTHVSSGDTGGPRSQELLART*AGVTHG
Trigger: CCCATGGGTGACTCCAGCCCAGGTTCTGGCAAGAAG...TTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp TGTCTCGGGACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAACTCCAGAGCTCTCTTaGGTACTGGTCCCACTGGTG +
Preference number: 4 (lower is better)
Translates to: CLGTHVSSGDTGGPRSQETPELS*VLVPLV
Trigger: CACCAGTGGGACCAGTACTCAAGAGAGCTCTGGAGT...TTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACGTGATGGCATTGGGCTaGTCACCTGGGATGGACTGG +
Preference number: 4 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYVMALG*SPGMDW
Trigger: CCAGTCCATCCCAGGTGATCAGCCCAATGCCATCAC...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACACACTCGCCACTGCCTaGACCTCCGCATCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYTLATA*TSASCQ
Trigger: TTGGCAAGATGCGGAGGTGCAGGCAGTGGCGAGTGT...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGTATAATCTACTGGTCCCACTGGTaGGGGAGGGGAGCGCAGTCA +
Preference number: 4 (lower is better)
Translates to: DTRLFWRHGRAKVPGSIIYWSHW*GRGAQS
Trigger: TGACTGCGCTCCCCTCCCCCACCAGTGGGACCAGTA...GATTATACTTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp AATGCAGGGACAGCCTGTTCTAGCCACTTTACAGCAGAGGATTACCTGGGGCCAGAGTACTGGTCCCACTaGTGGGGGAGGGGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: NAGTACSSHFTAEDYLGPEYWSH*WGRGAQ
Trigger: CTGCGCTCCCCTCCCCCACCAGTGGGACCAGTACTC...TGGCCCCAGGTAATCCTCTGCTGTAAAGTGGCTAGAACAGGCTGTCCCTGCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACCCTGGCTGCTGTCACTaGAGTCTGCACTGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYPGCCH*SLHCSL
Trigger: CAGGGAACAGTGCAGACTCCAGTGACAGCAGCCAGG...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp TGTCTCGGGACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGATTGCCGGGAGAGTTaGATGTGGCAGGTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: CLGTHVSSGDTGGPRSQEDCRES*MWQVLS
Trigger: AGAAAGCACCTGCCACATTCAACTCTCCCGGCAATC...TTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGACCTACAGGAGAGGATaGGTGACTGACCACCCTGGC +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGTYRRG*VTDHPG
Trigger: GCCAGGGTGGTCAGTCACTCATCCTCTCCTGTAGGT...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp CGGGGAATGAGTTCAAAGAAGACAACCGGTGCCCCTCCAGCATCTAAGTCTGGTTGTGCACCTGTGGCATaGTGCCAGGGCACTGGCTGG +
Preference number: 4 (lower is better)
Translates to: RGMSSKKTTGAPPASKSGCAPVA*CQGTGW
Trigger: CCAGCCAGTGCCCTGGCATCATGCCACAGGTGCACA...ACCAGACTTAGATGCTGGAGGGGCACCGGTTGTCTTCTTTGAACTCATTCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp AATGCAGGGACAGCCTGTTCTAGCCACTTTACAGCAGAGGATTACCTGGGGCCATGTGCACCTGTGGCATaGTGCCAGGGCACTGGCTGG +
Preference number: 4 (lower is better)
Translates to: NAGTACSSHFTAEDYLGPCAPVA*CQGTGW
Trigger: CCAGCCAGTGCCCTGGCATCATGCCACAGGTGCACA...TGGCCCCAGGTAATCCTCTGCTGTAAAGTGGCTAGAACAGGCTGTCCCTGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp TGTCTCGGGACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAATCATGCTCACAAACCTaGATCAGGGCTTCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: CLGTHVSSGDTGGPRSQESCSQT*IRASAA
Trigger: AGCTGCCGAAGCCCTGATGCAGGTTTGTGAGCATGA...TTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp TGTCTCGGGACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGGTTGGGTGGTCTCATaGTCACAAACCTGCATCAGG +
Preference number: 4 (lower is better)
Translates to: CLGTHVSSGDTGGPRSQEGWVVS*SQTCIR
Trigger: CCTGATGCAGGTTTGTGAGCATGAGACCACCCAACC...TTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGTGCACCTCCGCATCTTaGCAAGCCCTGCTGGGAACT +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGCTSAS*QALLGT
Trigger: AGTTCCCAGCAGGGCTTGGCAAGATGCGGAGGTGCA...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGTGGTGGAGACGGATCTaGTCTCGACACTCGCCACTG +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGWWRRI*SRHSPL
Trigger: CAGTGGCGAGTGTCGAGAGCAGATCCGTCTCCACCA...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACGAGATGGGGTCTTCTTaGCAGAACCTGGGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYEMGSS*QNLGWS
Trigger: ACTCCAGCCCAGGTTCTGGCAAGAAGACCCCATCTC...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGTCCCAGGTCATTCCCTaGTCATCCCACACGACGTCC +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGSQVIP*SSHTTS
Trigger: GGACGTCGTGTGGGATGAGCAGGGAATGACCTGGGA...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGTCTGAAGAACCAGCCTaGTCTGCCCGGCTCCGCGGC +
Preference number: 4 (lower is better)
Translates to: GPLFILPFHTTPILKAMLSEEPA*SARLRG
Trigger: GCCGCGGAGCCGGGCAGAGCAGGCTGGTTCTTCAGA...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGCACCTTCTCTGGACCTaGGGGACATGCCGAAGGTTC +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGHLLWT*GTCRRF
Trigger: GAACCTTCGGCATGTCCCCCAGGTCCAGAGAAGGTG...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACCACTGGCTGGACTCCTaGGGGGCTAGCGTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHHWLDS*GASVLS
Trigger: TGACAGCACGCTAGCCCCCCAGGAGTCCAGCCAGTG...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp TGTCTCGGGACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAATTTGACGGAGCGAGATaGGGTCTTCTTGCCAGAACC +
Preference number: 4 (lower is better)
Translates to: CLGTHVSSGDTGGPRSQEFDGAR*GLLART
Trigger: GGTTCTGGCAAGAAGACCCCATCTCGCTCCGTCAAA...TTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGCAGGCTGGAGTGCAATaGCGCGAACTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGQAGVQ*RELGSL
Trigger: CAGTGAGCCAAGTTCGCGCCATTGCACTCCAGCCTG...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGCAGGCATGGATGAGGTaGTGGCATTGGGCTGATCAC +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGQAWMR*WHWADH
Trigger: GTGATCAGCCCAATGCCATCACCTCATCCATGCCTG...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp AATGCAGGGACAGCCTGTTCTAGCCACTTTACAGCAGAGGATTACCTGGGGCCAAGGAGAGCTGGTCGATaGCGAGGTGAGGCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: NAGTACSSHFTAEDYLGPRRAGR*RGEAAC
Trigger: ACAGGCTGCCTCACCTCGGCATCGACCAGCTCTCCT...TGGCCCCAGGTAATCCTCTGCTGTAAAGTGGCTAGAACAGGCTGTCCCTGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp GACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGTATAATCACTGACCACCCTGGCTaGTGTCACTGGAGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: DTRLFWRHGRAKVPGSIITDHPG*CHWSLH
Trigger: GTGCAGACTCCAGTGACAGCAGCCAGGGTGGTCAGT...GATTATACTTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACCTCTGCGTCCAAGGATaGACCATACACTTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYLCVQG*TIHFPG
Trigger: ACCTGGGAAGTGTATGGTGCATCCTTGGACGCAGAG...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACGATTCCCAGGGACTCTaGGTCCAAGGATGCACCATA +
Preference number: 4 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYDSQGL*VQGCTI
Trigger: TATGGTGCATCCTTGGACGCAGAGTCCCTGGGAATC...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGATTGGGCTGATCACCTaGGATGGACTGGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGIGLIT*DGLAGV
Trigger: CACACCTGCCAGTCCATCCCAGGTGATCAGCCCAAT...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp CGGGGAATGAGTTCAAAGAAGACAACCGGTGCCCCTCCAGCATCTAAGTCTGGTCATCTGACGCTGTGCTaGCAGCGGCACCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: RGMSSKKTTGAPPASKSGHLTLC*QRHLLW
Trigger: CCAGAGAAGGTGCCGCTGCCAGCACAGCGTCAGATG...ACCAGACTTAGATGCTGGAGGGGCACCGGTTGTCTTCTTTGAACTCATTCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGTATAATCATGGCAGGCTCAGGCTaGTGGCTGTCTTGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: DTRLFWRHGRAKVPGSIIMAGSG*WLSWSV
Trigger: GACAGACCAAGACAGCCACCAGCCTGAGCCTGCCAT...GATTATACTTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp AATGCAGGGACAGCCTGTTCTAGCCACTTTACAGCAGAGGATTACCTGGGGCCAACCCATGGGATCAGATaGCAGGCTCAGGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: NAGTACSSHFTAEDYLGPTHGIR*QAQAGG
Trigger: GCCACCAGCCTGAGCCTGCCATCTGATCCCATGGGT...TGGCCCCAGGTAATCCTCTGCTGTAAAGTGGCTAGAACAGGCTGTCCCTGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp CGGGGAATGAGTTCAAAGAAGACAACCGGTGCCCCTCCAGCATCTAAGTCTGGTGACGGACGCAGCAGTTaGGGCGTCGGAAGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: RGMSSKKTTGAPPASKSGDGRSS*GVGSSA
Trigger: TGCAGAACTTCCGACGCCCCAACTGCTGCGTCCGTC...ACCAGACTTAGATGCTGGAGGGGCACCGGTTGTCTTCTTTGAACTCATTCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGTATAATCGACACACGTCTCTTCTaGAGACACGGGAGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: DTRLFWRHGRAKVPGSIIDTRLF*RHGRAK
Trigger: CTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTC...GATTATACTTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACGGAGGTGGGGTCTGGTaGGAGGTGTTTTGGTTTACT +
Preference number: 4 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYGGGVW*EVFWFT
Trigger: AGTAAACCAAAACACCTCCCACCAGACCCCACCTCC...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp GACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGTATAATCACTCCAGAGCTCTCTTaGGTACTGGTCCCACTGGTG +
Preference number: 4 (lower is better)
Translates to: DTRLFWRHGRAKVPGSIITPELS*VLVPLV
Trigger: CACCAGTGGGACCAGTACTCAAGAGAGCTCTGGAGT...GATTATACTTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGATCTTCAGGCATGGATaGGGTGATGGCATTGGGCTG +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGIFRHG*GDGIGL
Trigger: CAGCCCAATGCCATCACCTCATCCATGCCTGAAGAT...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACACCTACAGGAGAGGATaGGTGACTGACCACCCTGGC +
Preference number: 4 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHTYRRG*VTDHPG
Trigger: GCCAGGGTGGTCAGTCACTCATCCTCTCCTGTAGGT...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACTTGAACCTTGACATCTaGCGCTGTGCTGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHLNLDI*RCAGSG
Trigger: GCCGCTGCCAGCACAGCGTCAGATGTCAAGGTTCAA...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGGGCTTCTTTGAACCTTaGCATCTGACGCTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGGFFEP*HLTLCW
Trigger: CCAGCACAGCGTCAGATGTCAAGGTTCAAAGAAGCC...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp TGTCTCGGGACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAATCGTACTGGCTTCTTTaGACCTTGACATCTGACGCT +
Preference number: 4 (lower is better)
Translates to: CLGTHVSSGDTGGPRSQESYWLL*TLTSDA
Trigger: AGCGTCAGATGTCAAGGTTCAAAGAAGCCAGTACGA...TTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGCACTGCTGTGGCAAATaGCACGCAGCTGCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGHCCGK*HAAALV
Trigger: AACAAGAGCAGCTGCGTGTCATTTGCCACAGCAGTG...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp CGGGGAATGAGTTCAAAGAAGACAACCGGTGCCCCTCCAGCATCTAAGTCTGGTCCCACACGACGTCCCTaGCACGCTTGGACTGTTTCA +
Preference number: 4 (lower is better)
Translates to: RGMSSKKTTGAPPASKSGPTRRP*HAWTVS
Trigger: TGAAACAGTCCAAGCGTGTCAGGGACGTCGTGTGGG...ACCAGACTTAGATGCTGGAGGGGCACCGGTTGTCTTCTTTGAACTCATTCCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACTACCCACGGGACACATaGGTCTCTAGAGAGAATACC +
Preference number: 4 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYYPRDT*VSRENT
Trigger: GGTATTCTCTCTAGAGACTCATGTGTCCCGTGGGTA...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTGGCGGGCCCGCGAGCTaGGGTCCTTCTCAGCCCGGT +
Preference number: 4 (lower is better)
Translates to: STQITSHVFVKASSFIGFGGPAS*GPSQPG
Trigger: ACCGGGCTGAGAAGGACCTCAGCTCGCGGGCCCGCC...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGCCGGAGCGAGCTCCGTaGGTTCAGGAACTGAAATTA +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGPERAP*VQELKL
Trigger: TAATTTCAGTTCCTGAACGCACGGAGCTCGCTCCGG...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGACGAGGCAATTTAAGTaGCCTGGAACCCCACCCAAG +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGTRQFK*PGTPPK
Trigger: CTTGGGTGGGGTTCCAGGGCACTTAAATTGCCTCGT...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACTCTCCCAGGCTGGAGTaGAATGGCGCGAACTTGGCT +
Preference number: 4 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHSPRLE*NGANLA
Trigger: AGCCAAGTTCGCGCCATTGCACTCCAGCCTGGGAGA...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp AATGCAGGGACAGCCTGTTCTAGCCACTTTACAGCAGAGGATTACCTGGGGCCAAGCTCTCTTGAGTACTaGTCCCACTGGTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: NAGTACSSHFTAEDYLGPSSLEY*SHWWGR
Trigger: CCTCCCCCACCAGTGGGACCAGTACTCAAGAGAGCT...TGGCCCCAGGTAATCCTCTGCTGTAAAGTGGCTAGAACAGGCTGTCCCTGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGTATAATCGGCAGGTGTGCTGATTaGCGGGCATTGTCAATGGTG +
Preference number: 4 (lower is better)
Translates to: DTRLFWRHGRAKVPGSIIGRCAD*RALSMV
Trigger: CACCATTGACAATGCCCGCCAATCAGCACACCTGCC...GATTATACTTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGATACTGGGGCTGGTaGAGACGGATCTGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHGYWGW*RRICSR
Trigger: TCGAGAGCAGATCCGTCTCCACCAGCCCCAGTATCC...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGTATAATCGTTTCAGCTGGAGCTTaGAGTCTGCGCCAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: DTRLFWRHGRAKVPGSIIVSAGA*SLRQAA
Trigger: AGCAGCTTGGCGCAGACTCCAAGCTCCAGCTGAAAC...GATTATACTTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGTTGGACTGTTTCAGCTaGAGCTTGGAGTCTGCGCCA +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGLDCFS*SLESAP
Trigger: TGGCGCAGACTCCAAGCTCCAGCTGAAACAGTCCAA...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGACACACGTCTCTTCTaGAGACACGGGAGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHDTRLF*RHGRAK
Trigger: CTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTC...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp TGTCTCGGGACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAAGAGAGATTATGTCCTaGCAGAGGCATCTGAGACAG +
Preference number: 4 (lower is better)
Translates to: CLGTHVSSGDTGGPRSQEREIMS*QRHLRQ
Trigger: CTGTCTCAGATGCCTCTGCCAGGACATAATCTCTCT...TTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR CAA 72 bp ATTCTCAAGGCGATGCTGCTCATCCAGGCCAGTGCCTaGGAGGATACTCATGTGTCTCGGGACACACGTCTC +
Preference number: 4 (lower is better)
Translates to: ILKAMLLIQASA*EDTHVSRDTRL
Trigger: GAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACTGGCCTGGATGAGCAGCATCGCCTTGAGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGTTCTGCAGGGGCACCTaGAAAGCCATTGGCATTCTT +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGFCRGT*KAIGIL
Trigger: AAGAATGCCAATGGCTTTTCAGGTGCCCCTGCAGAA...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCTGCAGAACTCGGGGCTaGTGCTGCGGGCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLCRTRG*CCGLAA
Trigger: AGCAGCCAGCCCGCAGCATCAGCCCCGAGTTCTGCA...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGGATCTTTGCTGCTACTaGGGACGCCTCCCACAGGAC +
Preference number: 4 (lower is better)
Translates to: GPLFILPFHTTPILKAMLDLCCY*GRLPQD
Trigger: GTCCTGTGGGAGGCGTCCTCAGTAGCAGCAAAGATC...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACTCGTACTGGCTTCTTTaGACCTTGACATCTGACGCT +
Preference number: 4 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYSYWLL*TLTSDA
Trigger: AGCGTCAGATGTCAAGGTTCAAAGAAGCCAGTACGA...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp GACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGTATAATCCACTGCTGTGGCAAATaGCACGCAGCTGCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: DTRLFWRHGRAKVPGSIIHCCGK*HAAALV
Trigger: AACAAGAGCAGCTGCGTGTCATTTGCCACAGCAGTG...GATTATACTTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp GACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGTATAATCTCTTATCTCCTGGAGTaGGTCCTACCTGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: DTRLFWRHGRAKVPGSIISYLLE*VLPEQQ
Trigger: CTGCTGCTCAGGTAGGACTCACTCCAGGAGATAAGA...GATTATACTTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGCCAGAACAGATACTGTaGATTGACTGTACCCACGGG +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGPEQIL*IDCTHG
Trigger: CCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGG...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp CGGGGAATGAGTTCAAAGAAGACAACCGGTGCCCCTCCAGCATCTAAGTCTGGTAGATTAGTGCCCTTTTaGAAGTGGCCCGGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: RGMSSKKTTGAPPASKSGRLVPF*KWPGRG
Trigger: TCCCCTCCCGGGCCACTTTCAAAAGGGCACTAATCT...ACCAGACTTAGATGCTGGAGGGGCACCGGTTGTCTTCTTTGAACTCATTCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACACTCATGTTGAAGTCTaGACTCCTAAGGCGATGGTG +
Preference number: 4 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYTHVEV*TPKAMV
Trigger: CACCATCGCCTTAGGAGTTCAGACTTCAACATGAGT...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp AATGCAGGGACAGCCTGTTCTAGCCACTTTACAGCAGAGGATTACCTGGGGCCATCACAGATGGCTCCCTaGCTTTCCCCTTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: NAGTACSSHFTAEDYLGPSQMAP*LSPSGP
Trigger: TGGACCTGAAGGGGAAAGGCAGGGAGCCATCTGTGA...TGGCCCCAGGTAATCCTCTGCTGTAAAGTGGCTAGAACAGGCTGTCCCTGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGTGCACCTCCGCATCTTaGCAAGCCCTGCTGGGAACT +
Preference number: 4 (lower is better)
Translates to: GPLFILPFHTTPILKAMLCTSAS*QALLGT
Trigger: AGTTCCCAGCAGGGCTTGGCAAGATGCGGAGGTGCA...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp CGGGGAATGAGTTCAAAGAAGACAACCGGTGCCCCTCCAGCATCTAAGTCTGGTAGACTCAGCTGCAGCTaGCTGAATGTGCACCTGTGG +
Preference number: 4 (lower is better)
Translates to: RGMSSKKTTGAPPASKSGRLSCS*LNVHLW
Trigger: CCACAGGTGCACATTCAGGCAGCTGCAGCTGAGTCT...ACCAGACTTAGATGCTGGAGGGGCACCGGTTGTCTTCTTTGAACTCATTCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACAGACTCAGCTGCAGCTaGCTGAATGTGCACCTGTGG +
Preference number: 4 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHRLSCS*LNVHLW
Trigger: CCACAGGTGCACATTCAGGCAGCTGCAGCTGAGTCT...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp CGGGGAATGAGTTCAAAGAAGACAACCGGTGCCCCTCCAGCATCTAAGTCTGGTGAGATGGGGTCTTCTTaGCAGAACCTGGGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: RGMSSKKTTGAPPASKSGEMGSS*QNLGWS
Trigger: ACTCCAGCCCAGGTTCTGGCAAGAAGACCCCATCTC...ACCAGACTTAGATGCTGGAGGGGCACCGGTTGTCTTCTTTGAACTCATTCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGTCCCAGGTCATTCCCTaGTCATCCCACACGACGTCC +
Preference number: 4 (lower is better)
Translates to: GPLFILPFHTTPILKAMLSQVIP*SSHTTS
Trigger: GGACGTCGTGTGGGATGAGCAGGGAATGACCTGGGA...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACAGGAGAAGACATATCTaGTTGGGTGGTCTCATGCTC +
Preference number: 4 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYRRRHI*LGGLML
Trigger: GAGCATGAGACCACCCAACCAGATATGTCTTCTCCT...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGCAGGTGTGCTGATTaGCGGGCATTGTCAATGGTG +
Preference number: 4 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHGRCAD*RALSMV
Trigger: CACCATTGACAATGCCCGCCAATCAGCACACCTGCC...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp CGGGGAATGAGTTCAAAGAAGACAACCGGTGCCCCTCCAGCATCTAAGTCTGGTATTGGGCTGATCACCTaGGATGGACTGGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: RGMSSKKTTGAPPASKSGIGLIT*DGLAGV
Trigger: CACACCTGCCAGTCCATCCCAGGTGATCAGCCCAAT...ACCAGACTTAGATGCTGGAGGGGCACCGGTTGTCTTCTTTGAACTCATTCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGCCTGGCTGCTGTCACTaGAGTCTGCACTGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: GPLFILPFHTTPILKAMLPGCCH*SLHCSL
Trigger: CAGGGAACAGTGCAGACTCCAGTGACAGCAGCCAGG...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGACAGAAGTTGTGCCTTaGGGGCCCGAGGCAGTGACA +
Preference number: 4 (lower is better)
Translates to: GPLFILPFHTTPILKAMLTEVVP*GPEAVT
Trigger: TGTCACTGCCTCGGGCCCCCAAGGCACAACTTCTGT...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGGCAGGCTCAGGCTGGTaGCTGTCTTGGTCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: GPLFILPFHTTPILKAMLAGSGW*LSWSVC
Trigger: ACAGACAGACCAAGACAGCCACCAGCCTGAGCCTGC...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGTGCCAGAACCTGGGCTaGAGTCACCCATGGGATCAG +
Preference number: 4 (lower is better)
Translates to: GPLFILPFHTTPILKAMLCQNLG*SHPWDQ
Trigger: CTGATCCCATGGGTGACTCCAGCCCAGGTTCTGGCA...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGCTTCTTGCCAGAACCTaGGCTGGAGTCACCCATGGG +
Preference number: 4 (lower is better)
Translates to: GPLFILPFHTTPILKAMLLLART*AGVTHG
Trigger: CCCATGGGTGACTCCAGCCCAGGTTCTGGCAAGAAG...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGTATAATCTCCAGGCCAGTGCCTTaGAGGATACTCATGTGTCTC +
Preference number: 4 (lower is better)
Translates to: DTRLFWRHGRAKVPGSIISRPVP*RILMCL
Trigger: GAGACACATGAGTATCCTCCAAGGCACTGGCCTGGA...GATTATACTTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACCAGCAGAGGATTACCTaGGGCCACCCATCTGGAGTA +
Preference number: 4 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHQQRIT*GHPSGV
Trigger: TACTCCAGATGGGTGGCCCCAGGTAATCCTCTGCTG...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGGCAAGAGTTAGAGAATaGCAGCCACAGGGCACCATT +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGARVRE*QPQGTI
Trigger: AATGGTGCCCTGTGGCTGCCATTCTCTAACTCTTGC...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR CAA 72 bp GGTCACAGAGCCCTCATGAGTGAGATTAGTGCCCTTTaGAAAGTGGCCCGGGAGGGGACACTTCATCCCTTT +
Preference number: 4 (lower is better)
Translates to: GHRALMSEISAL*KVAREGTLHPF
Trigger: AAAGGGATGAAGTGTCCCCTCCCGGGCCACTTTCAAAAGGGCACTAATCTCACTCATGAGGGCTCTGTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGATTGCCGGGAGAGTTaGATGTGGCAGGTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHDCRES*MWQVLS
Trigger: AGAAAGCACCTGCCACATTCAACTCTCCCGGCAATC...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGCAGGCATGGATGAGGTaGTGGCATTGGGCTGATCAC +
Preference number: 4 (lower is better)
Translates to: GPLFILPFHTTPILKAMLQAWMR*WHWADH
Trigger: GTGATCAGCCCAATGCCATCACCTCATCCATGCCTG...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp CGGGGAATGAGTTCAAAGAAGACAACCGGTGCCCCTCCAGCATCTAAGTCTGGTATCTTCAGGCATGGATaGGGTGATGGCATTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RGMSSKKTTGAPPASKSGIFRHG*GDGIGL
Trigger: CAGCCCAATGCCATCACCTCATCCATGCCTGAAGAT...ACCAGACTTAGATGCTGGAGGGGCACCGGTTGTCTTCTTTGAACTCATTCCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp CGGGGAATGAGTTCAAAGAAGACAACCGGTGCCCCTCCAGCATCTAAGTCTGGTGGCTTCTTTGAACCTTaGCATCTGACGCTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RGMSSKKTTGAPPASKSGGFFEP*HLTLCW
Trigger: CCAGCACAGCGTCAGATGTCAAGGTTCAAAGAAGCC...ACCAGACTTAGATGCTGGAGGGGCACCGGTTGTCTTCTTTGAACTCATTCCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGGAGCTTTTTAGCAGTTaGCTCTTCCCTCACTGGAGT +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGELFSS*LFPHWS
Trigger: ACTCCAGTGAGGGAAGAGTCAACTGCTAAAAAGCTC...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCTGCGTGGGCTGGCTTTaGCGGAGCGAGATGGGGTCT +
Preference number: 4 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLCVGWL*RSEMGS
Trigger: AGACCCCATCTCGCTCCGTCAAAGCCAGCCCACGCA...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp AATGCAGGGACAGCCTGTTCTAGCCACTTTACAGCAGAGGATTACCTGGGGCCATCTTATCTCCTGGAGTaGGTCCTACCTGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: NAGTACSSHFTAEDYLGPSYLLE*VLPEQQ
Trigger: CTGCTGCTCAGGTAGGACTCACTCCAGGAGATAAGA...TGGCCCCAGGTAATCCTCTGCTGTAAAGTGGCTAGAACAGGCTGTCCCTGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGGCTCATTACGGGGAATaGGTTCAAAGAAGACAACCG +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGAHYGE*VQRRQP
Trigger: CGGTTGTCTTCTTTGAACTCATTCCCCGTAATGAGC...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp TGTCTCGGGACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGTACATATGCCTGCCTaGATACAGAAATTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: CLGTHVSSGDTGGPRSQEVHMPA*IQKLAF
Trigger: AAAGGCCAATTTCTGTATTCAGGCAGGCATATGTAC...TTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACAGCTGTAGACTCAGCTaGAGCTGCCTGAATGTGCAC +
Preference number: 4 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHSCRLS*SCLNVH
Trigger: GTGCACATTCAGGCAGCTGCAGCTGAGTCTACAGCT...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACGTTTGTCGTTTTCTCTaGAAACTCAGATGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYVCRFL*KLRWPG
Trigger: ACCAGGCCATCTGAGTTTGCAGAGAAAACGACAAAC...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp TGTCTCGGGACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGTCACATTTAACTTTTaGTCCTTGAGGAACTCGCTG +
Preference number: 4 (lower is better)
Translates to: CLGTHVSSGDTGGPRSQEVTFNF*SLRNSL
Trigger: CAGCGAGTTCCTCAAGGAGCAAAAGTTAAATGTGAC...TTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGGAGTCTGCGCCAAGCTaGTTTTTCTTATCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGESAPS*FFLSPG
Trigger: TCCAGGAGATAAGAAAAAGCAGCTTGGCGCAGACTC...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGATTCCCAGGGACTCTaGGTCCAAGGATGCACCATA +
Preference number: 4 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHDSQGL*VQGCTI
Trigger: TATGGTGCATCCTTGGACGCAGAGTCCCTGGGAATC...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp AATGCAGGGACAGCCTGTTCTAGCCACTTTACAGCAGAGGATTACCTGGGGCCACAATTCTCAAGGCGATaGTGCTCATCCAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: NAGTACSSHFTAEDYLGPQFSRR*CSSRPV
Trigger: CACTGGCCTGGATGAGCAGCATCGCCTTGAGAATTG...TGGCCCCAGGTAATCCTCTGCTGTAAAGTGGCTAGAACAGGCTGTCCCTGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp AATGCAGGGACAGCCTGTTCTAGCCACTTTACAGCAGAGGATTACCTGGGGCCATCCCCCAACAATATCTaGAGGAAGGGAAGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: NAGTACSSHFTAEDYLGPSPNNI*RKGRLP
Trigger: GGGAAGCCTTCCCTTCCTGCAGATATTGTTGGGGGA...TGGCCCCAGGTAATCCTCTGCTGTAAAGTGGCTAGAACAGGCTGTCCCTGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCTACTGGTCCCACTGGTaGGGGAGGGGAGCGCAGTCA +
Preference number: 4 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLYWSHW*GRGAQS
Trigger: TGACTGCGCTCCCCTCCCCCACCAGTGGGACCAGTA...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp TGTCTCGGGACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAATTTCACTTTCAGCTTaGTTGGTCATCGTACTGGCT +
Preference number: 4 (lower is better)
Translates to: CLGTHVSSGDTGGPRSQEISLSA*LVIVLA
Trigger: AGCCAGTACGATGACCAACCAAGCTGAAAGTGAAAT...TTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp TGTCTCGGGACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAATCTTTACACGTATGCTaGGCATTACTGGAGACCAAA +
Preference number: 4 (lower is better)
Translates to: CLGTHVSSGDTGGPRSQESLHVC*ALLETK
Trigger: TTTGGTCTCCAGTAATGCCCAGCATACGTGTAAAGA...TTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACCTCTGCAAACTCAGATaGCCTGGTTTCAAATTTCCC +
Preference number: 4 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYLCKLR*PGFKFP
Trigger: GGGAAATTTGAAACCAGGCCATCTGAGTTTGCAGAG...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACTTTGACGGAGCGAGATaGGGTCTTCTTGCCAGAACC +
Preference number: 4 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHFDGAR*GLLART
Trigger: GGTTCTGGCAAGAAGACCCCATCTCGCTCCGTCAAA...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp CGGGGAATGAGTTCAAAGAAGACAACCGGTGCCCCTCCAGCATCTAAGTCTGGTTTGGACTGTTTCAGCTaGAGCTTGGAGTCTGCGCCA +
Preference number: 4 (lower is better)
Translates to: RGMSSKKTTGAPPASKSGLDCFS*SLESAP
Trigger: TGGCGCAGACTCCAAGCTCCAGCTGAAACAGTCCAA...ACCAGACTTAGATGCTGGAGGGGCACCGGTTGTCTTCTTTGAACTCATTCCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGCAGCAAGACTTTGAGTaGCTCCTCTTCCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: GPLFILPFHTTPILKAMLQQDFE*LLFPLG
Trigger: GCCCAGAGGGAAGAGGAGCCACTCAAAGTCTTGCTG...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGAACTGGGGATATGGCTaGGCTTTCCATCTCCTTCTA +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGNWGYG*AFHLLL
Trigger: TAGAAGGAGATGGAAAGCCCAGCCATATCCCCAGTT...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACGCTGGAGGGAGAGTATaGCTCTTGGAAATTTTGAAG +
Preference number: 4 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYAGGRV*LLEILK
Trigger: CTTCAAAATTTCCAAGAGCCATACTCTCCCTCCAGC...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp GCATCGTTTTCTGTAAGGCATCATTTGAAGCCTCTTTGGATACAAGATCTCATGCAGCTGCCCTGGGGCTaGGGTCTGGTTCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ASFSVRHHLKPLWIQDLMQLPWG*GLVLQG
Trigger: CCCCTGCAGAACCAGACCTCAGCCCCAGGGCAGCTG...CATGAGATCTTGTATCCAAAGAGGCTTCAAATGATGCCTTACAGAAAACGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp CGGGGAATGAGTTCAAAGAAGACAACCGGTGCCCCTCCAGCATCTAAGTCTGGTAACTCACAGGACACCTaGTCTTTGCTGCTACTGAGG +
Preference number: 4 (lower is better)
Translates to: RGMSSKKTTGAPPASKSGNSQDT*SLLLLR
Trigger: CCTCAGTAGCAGCAAAGATCAGGTGTCCTGTGAGTT...ACCAGACTTAGATGCTGGAGGGGCACCGGTTGTCTTCTTTGAACTCATTCCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp CGGGGAATGAGTTCAAAGAAGACAACCGGTGCCCCTCCAGCATCTAAGTCTGGTTACCCACGGGACACATaGGTCTCTAGAGAGAATACC +
Preference number: 4 (lower is better)
Translates to: RGMSSKKTTGAPPASKSGYPRDT*VSRENT
Trigger: GGTATTCTCTCTAGAGACTCATGTGTCCCGTGGGTA...ACCAGACTTAGATGCTGGAGGGGCACCGGTTGTCTTCTTTGAACTCATTCCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp GACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGTATAATCATCCCTTTTACTGTGTaGGGACACAGCAAACAGGCA +
Preference number: 4 (lower is better)
Translates to: DTRLFWRHGRAKVPGSIIIPFTV*GHSKQA
Trigger: TGCCTGTTTGCTGTGTCCTCACACAGTAAAAGGGAT...GATTATACTTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGGGTTGGGTGGTCTCATaGTCACAAACCTGCATCAGG +
Preference number: 4 (lower is better)
Translates to: GPLFILPFHTTPILKAMLGWVVS*SQTCIR
Trigger: CCTGATGCAGGTTTGTGAGCATGAGACCACCCAACC...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACCTTGGTTTCTCAGGTTaGTCTCTATTTGAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYLGFSG*SLFEVL
Trigger: GAGAACCTCAAATAGAGAGCAACCTGAGAAACCAAG...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp AATGCAGGGACAGCCTGTTCTAGCCACTTTACAGCAGAGGATTACCTGGGGCCAGCTGTCACTGGAGTCTaGACTGTTCCCTGGATTGTT +
Preference number: 4 (lower is better)
Translates to: NAGTACSSHFTAEDYLGPAVTGV*TVPWIV
Trigger: AACAATCCAGGGAACAGTGCAGACTCCAGTGACAGC...TGGCCCCAGGTAATCCTCTGCTGTAAAGTGGCTAGAACAGGCTGTCCCTGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp CGGGGAATGAGTTCAAAGAAGACAACCGGTGCCCCTCCAGCATCTAAGTCTGGTGCTGTCACTGGAGTCTaGACTGTTCCCTGGATTGTT +
Preference number: 4 (lower is better)
Translates to: RGMSSKKTTGAPPASKSGAVTGV*TVPWIV
Trigger: AACAATCCAGGGAACAGTGCAGACTCCAGTGACAGC...ACCAGACTTAGATGCTGGAGGGGCACCGGTTGTCTTCTTTGAACTCATTCCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGCAGTGACAGAGGGCTaGTTGTTCTCTGAACATCCA +
Preference number: 4 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHAVTEG*LFSEHP
Trigger: TGGATGTTCAGAGAACAAGCAGCCCTCTGTCACTGC...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGAGCTGTAGACTCAGCTaGAGCTGCCTGAATGTGCAC +
Preference number: 4 (lower is better)
Translates to: GPLFILPFHTTPILKAMLSCRLS*SCLNVH
Trigger: GTGCACATTCAGGCAGCTGCAGCTGAGTCTACAGCT...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGTCTTCTTTACACGTATaGTGGGCATTACTGGAGACC +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGSSLHV*WALLET
Trigger: GGTCTCCAGTAATGCCCAGCATACGTGTAAAGAAGA...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp CGGGGAATGAGTTCAAAGAAGACAACCGGTGCCCCTCCAGCATCTAAGTCTGGTCTGGAGCTTGGAGTCTaGGCCAAGCTGCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: RGMSSKKTTGAPPASKSGLELGV*AKLLFL
Trigger: AAGAAAAAGCAGCTTGGCGCAGACTCCAAGCTCCAG...ACCAGACTTAGATGCTGGAGGGGCACCGGTTGTCTTCTTTGAACTCATTCCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACCACAGAGATGCGCCTTaGCTTCAGTGCAGGAAAATG +
Preference number: 4 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHHRDAP*LQCRKM
Trigger: CATTTTCCTGCACTGAAGGCAAGGCGCATCTCTGTG...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp AATGCAGGGACAGCCTGTTCTAGCCACTTTACAGCAGAGGATTACCTGGGGCCATCAGAATCACAGAGATaGGCCTTGCCTTCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: NAGTACSSHFTAEDYLGPSESQR*ALPSVQ
Trigger: CTGCACTGAAGGCAAGGCGCATCTCTGTGATTCTGA...TGGCCCCAGGTAATCCTCTGCTGTAAAGTGGCTAGAACAGGCTGTCCCTGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACTCTAAGCACAAAATCTaGTACCAGGGAGTAACACCA +
Preference number: 4 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYSKHKI*YQGVTP
Trigger: TGGTGTTACTCCCTGGTAGCAGATTTTGTGCTTAGA...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGGAAGACATATCTGGTTaGGTGGTCTCATGCTCACAA +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGEDISG*VVSCSQ
Trigger: TTGTGAGCATGAGACCACCCAACCAGATATGTCTTC...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGTCTGGGTCTGTTTTGTaGCCGTTTGTCGTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGSGSVL*PFVVFS
Trigger: AGAGAAAACGACAAACGGCCACAAAACAGACCCAGA...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACCTTTGCAAATGGTTCTaGATCGCGATTCCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHLCKWF*IAIPRD
Trigger: GTCCCTGGGAATCGCGATCCAGAACCATTTGCAAAG...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGTATAATCGGAAGTTCTGCAGCATaGACTGGAAAACACTGTGCT +
Preference number: 4 (lower is better)
Translates to: DTRLFWRHGRAKVPGSIIGSSAA*TGKHCA
Trigger: AGCACAGTGTTTTCCAGTCCATGCTGCAGAACTTCC...GATTATACTTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCCCCTGTCTCCCAGGCTaGAGTGCAATGGCGCGAACT +
Preference number: 4 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLPCLPG*SAMART
Trigger: AGTTCGCGCCATTGCACTCCAGCCTGGGAGACAGGG...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACGCCCAGCAAAACGTCTaGCACAAAGGCATTATTTTT +
Preference number: 4 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYAQQNV*HKGIIF
Trigger: AAAAATAATGCCTTTGTGCCAGACGTTTTGCTGGGC...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp CGGGGAATGAGTTCAAAGAAGACAACCGGTGCCCCTCCAGCATCTAAGTCTGGTGTTGAAATTTGGAGGTaGGGTCTGGTGGGAGGTGTT +
Preference number: 4 (lower is better)
Translates to: RGMSSKKTTGAPPASKSGVEIWR*GLVGGV
Trigger: AACACCTCCCACCAGACCCCACCTCCAAATTTCAAC...ACCAGACTTAGATGCTGGAGGGGCACCGGTTGTCTTCTTTGAACTCATTCCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGGAGCTAGGCTTTTTCTaGGATGGTAGAAACACTGTA +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGELGFF*DGRNTV
Trigger: TACAGTGTTTCTACCATCTCAGAAAAAGCCTAGCTC...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333209.4
CDS-3UTR TCA 90 bp CGGGGAATGAGTTCAAAGAAGACAACCGGTGCCCCTCCAGCATCTAAGTCTGGTGGGCTGCTTGTTCTCTaGACATCCAGATTCTCTAGT +
Preference number: 4 (lower is better)
Translates to: RGMSSKKTTGAPPASKSGGLLVL*TSRFSS
Trigger: ACTAGAGAATCTGGATGTTCAGAGAACAAGCAGCCC...ACCAGACTTAGATGCTGGAGGGGCACCGGTTGTCTTCTTTGAACTCATTCCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp GACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGTATAATCTGCTGGGAACTTCCTTaGTTTCACTTTCAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: DTRLFWRHGRAKVPGSIICWELP*FHFQLG
Trigger: ACCAAGCTGAAAGTGAAATCAAGGAAGTTCCCAGCA...GATTATACTTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp TGTCTCGGGACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAACGGGTCTGGCTATTTTaGGTTTTGATTAATTTCTCA +
Preference number: 4 (lower is better)
Translates to: CLGTHVSSGDTGGPRSQERVWLF*VLINFS
Trigger: TGAGAAATTAATCAAAACTCAAAATAGCCAGACCCG...TTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp GACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGTATAATCAAACTAAGCAAGCTTTaGCATAGAGGGACGCATGTG +
Preference number: 4 (lower is better)
Translates to: DTRLFWRHGRAKVPGSIIKLSKL*HRGTHV
Trigger: CACATGCGTCCCTCTATGTCAAAGCTTGCTTAGTTT...GATTATACTTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp AATGCAGGGACAGCCTGTTCTAGCCACTTTACAGCAGAGGATTACCTGGGGCCAGCTCATTACGGGGAATaGGTTCAAAGAAGACAACCG +
Preference number: 4 (lower is better)
Translates to: NAGTACSSHFTAEDYLGPAHYGE*VQRRQP
Trigger: CGGTTGTCTTCTTTGAACTCATTCCCCGTAATGAGC...TGGCCCCAGGTAATCCTCTGCTGTAAAGTGGCTAGAACAGGCTGTCCCTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACTCTGGCAGATGTCACTaGTCACTTGGGAGACAGAAT +
Preference number: 4 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHSGRCH*SLGRQN
Trigger: ATTCTGTCTCCCAAGTGATCAGTGACATCTGCCAGA...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACTGGTTGCAGCTGTCTTaGGTTTTAAGCCAGCAAGAC +
Preference number: 4 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHWLQLS*VLSQQD
Trigger: GTCTTGCTGGCTTAAAACTCAAGACAGCTGCAACCA...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGCTGGGCAGAGTTAACTaGATTGCTTTCTACATGCTA +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGLGRVN*IAFYML
Trigger: TAGCATGTAGAAAGCAATTCAGTTAACTCTGCCCAG...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACTGCAAATCAACACACTaGTACATGTCCAAAAGGAGT +
Preference number: 4 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYCKSTH*YMSKRS
Trigger: ACTCCTTTTGGACATGTATCAGTGTGTTGATTTGCA...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp AATGCAGGGACAGCCTGTTCTAGCCACTTTACAGCAGAGGATTACCTGGGGCCAACACCAAATTGGCCTTaGTTTTGGGGTTCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: NAGTACSSHFTAEDYLGPTPNWP*FWGSQL
Trigger: AAGCTGGGAACCCCAAAATCAAGGCCAATTTGGTGT...TGGCCCCAGGTAATCCTCTGCTGTAAAGTGGCTAGAACAGGCTGTCCCTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGGTTGAATGTGGCAGGTaGTTTCTGCACTTCATTGAA +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGVECGR*FLHFIE
Trigger: TTCAATGAAGTGCAGAAAGCACCTGCCACATTCAAC...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGGCAGTGACAGAGGGCTaGTTGTTCTCTGAACATCCA +
Preference number: 4 (lower is better)
Translates to: GPLFILPFHTTPILKAMLAVTEG*LFSEHP
Trigger: TGGATGTTCAGAGAACAAGCAGCCCTCTGTCACTGC...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp CGGGGAATGAGTTCAAAGAAGACAACCGGTGCCCCTCCAGCATCTAAGTCTGGTGCTTTCCTTCAGAAATaGAGTGAGGATACTGGGGCT +
Preference number: 4 (lower is better)
Translates to: RGMSSKKTTGAPPASKSGAFLQK*SEDTGA
Trigger: AGCCCCAGTATCCTCACTGCATTTCTGAAGGAAAGC...ACCAGACTTAGATGCTGGAGGGGCACCGGTTGTCTTCTTTGAACTCATTCCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp AATGCAGGGACAGCCTGTTCTAGCCACTTTACAGCAGAGGATTACCTGGGGCCATGCTCTTGTTCAAAATaGTCAGGAGCACGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: NAGTACSSHFTAEDYLGPCSCSK*SGARLS
Trigger: GGAAAGCCGTGCTCCTGAGCATTTTGAACAAGAGCA...TGGCCCCAGGTAATCCTCTGCTGTAAAGTGGCTAGAACAGGCTGTCCCTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGCAAATGACACGCAGCTaGTCTTGTTCAAAATGCTCA +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGQMTRS*SCSKCS
Trigger: TGAGCATTTTGAACAAGAGCAGCTGCGTGTCATTTG...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp GACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGTATAATCTCCCTGATTTGTCTTTaGAAATGGTTCTGGATCGCG +
Preference number: 4 (lower is better)
Translates to: DTRLFWRHGRAKVPGSIISLICL*KWFWIA
Trigger: CGCGATCCAGAACCATTTGCAAAGACAAATCAGGGA...GATTATACTTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACATATCCTCTGTTATTTaGCAGGTGGCAGCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHISSVI*QVAAAD
Trigger: GTCAGCTGCTGCCACCTGGCAAATAACAGAGGATAT...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGGAGTACTGGTCCCACTaGTGGGGGAGGGGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: SRVRKYEYVWSESQRCALEYWSH*WGRGAQ
Trigger: CTGCGCTCCCCTCCCCCACCAGTGGGACCAGTACTC...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACCAGGTACAGTCCCCATaGAATTTCTCTTCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHQVQSP*NFSSGA
Trigger: TGCTCCTGAAGAGAAATTCCATGGGGACTGTACCTG...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp CGGGGAATGAGTTCAAAGAAGACAACCGGTGCCCCTCCAGCATCTAAGTCTGGTAGGAGAAGACATATCTaGTTGGGTGGTCTCATGCTC +
Preference number: 4 (lower is better)
Translates to: RGMSSKKTTGAPPASKSGRRRHI*LGGLML
Trigger: GAGCATGAGACCACCCAACCAGATATGTCTTCTCCT...ACCAGACTTAGATGCTGGAGGGGCACCGGTTGTCTTCTTTGAACTCATTCCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTCTGCTCCCTGGCAGCTaGGGATTGCCGGGAGAGTTG +
Preference number: 4 (lower is better)
Translates to: STQITSHVFVKASSFIGFLLPGS*GLPGEL
Trigger: CAACTCTCCCGGCAATCCCCAGCTGCCAGGGAGCAG...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACTCCCACAGGACAACTTaGTTTCTCAGGTTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHSHRTT*FLRLLS
Trigger: AGAGAGCAACCTGAGAAACCAAGTTGTCCTGTGGGA...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp AATGCAGGGACAGCCTGTTCTAGCCACTTTACAGCAGAGGATTACCTGGGGCCAGTCTGCACTGTTCCCTaGATTGTTTCTGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: NAGTACSSHFTAEDYLGPVCTVP*IVSGEG
Trigger: TCCTTCTCCAGAAACAATCCAGGGAACAGTGCAGAC...TGGCCCCAGGTAATCCTCTGCTGTAAAGTGGCTAGAACAGGCTGTCCCTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGTATAATCCACTTTCAGCTTGGTTaGTCATCGTACTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: DTRLFWRHGRAKVPGSIIHFQLG*SSYWLL
Trigger: AAGAAGCCAGTACGATGACCAACCAAGCTGAAAGTG...GATTATACTTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACAGTTTATTTTCCCGTTaGAAAGCTGTAGACTCAGCT +
Preference number: 4 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYSLFSR*KAVDSA
Trigger: AGCTGAGTCTACAGCTTTCCAACGGGAAAATAAACT...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGTATAATCGCACTGATAGAAATCTaGTCAATGGCGGTAGCTTTC +
Preference number: 4 (lower is better)
Translates to: DTRLFWRHGRAKVPGSIIALIEI*SMAVAF
Trigger: GAAAGCTACCGCCATTGACCAGATTTCTATCAGTGC...GATTATACTTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCATGGCAGGCTCAGGCTaGTGGCTGTCTTGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLMAGSG*WLSWSV
Trigger: GACAGACCAAGACAGCCACCAGCCTGAGCCTGCCAT...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACTTCTGCAGCATGGACTaGAAAACACTGTGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHFCSMD*KTLCCL
Trigger: AAGGCAGCACAGTGTTTTCCAGTCCATGCTGCAGAA...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp AATGCAGGGACAGCCTGTTCTAGCCACTTTACAGCAGAGGATTACCTGGGGCCAGGAAGTTCTGCAGCATaGACTGGAAAACACTGTGCT +
Preference number: 4 (lower is better)
Translates to: NAGTACSSHFTAEDYLGPGSSAA*TGKHCA
Trigger: AGCACAGTGTTTTCCAGTCCATGCTGCAGAACTTCC...TGGCCCCAGGTAATCCTCTGCTGTAAAGTGGCTAGAACAGGCTGTCCCTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp AATGCAGGGACAGCCTGTTCTAGCCACTTTACAGCAGAGGATTACCTGGGGCCAAGAGAGATTATGTCCTaGCAGAGGCATCTGAGACAG +
Preference number: 4 (lower is better)
Translates to: NAGTACSSHFTAEDYLGPREIMS*QRHLRQ
Trigger: CTGTCTCAGATGCCTCTGCCAGGACATAATCTCTCT...TGGCCCCAGGTAATCCTCTGCTGTAAAGTGGCTAGAACAGGCTGTCCCTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp TGTCTCGGGACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAATTGTCTTCCAGACATaGAGTTCTAACTCACCTTTT +
Preference number: 4 (lower is better)
Translates to: CLGTHVSSGDTGGPRSQEIVFQT*SSNSPF
Trigger: AAAAGGTGAGTTAGAACTCCATGTCTGGAAGACAAT...TTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGGGGCTGCTTGTTCTCTaGACATCCAGATTCTCTAGT +
Preference number: 4 (lower is better)
Translates to: GPLFILPFHTTPILKAMLGLLVL*TSRFSS
Trigger: ACTAGAGAATCTGGATGTTCAGAGAACAAGCAGCCC...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp ACCAAGAATAAATGTTTAAGTATGCAAGAGTTAGAGAATGGCAGCCACAGGGCATGCGTGGGCTGGCTTTaGCGGAGCGAGATGGGGTCT +
Preference number: 4 (lower is better)
Translates to: TKNKCLSMQELENGSHRACVGWL*RSEMGS
Trigger: AGACCCCATCTCGCTCCGTCAAAGCCAGCCCACGCA...TGCCCTGTGGCTGCCATTCTCTAACTCTTGCATACTTAAACATTTATTCTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCCCTGGCAGAGGCATCTaGGACAGAAGTGACACGAAC +
Preference number: 4 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLPGRGI*DRSDTN
Trigger: GTTCGTGTCACTTCTGTCTCAGATGCCTCTGCCAGG...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACAAAATGCTGCTGTCTTaGATAGGTCCCTATCTTATT +
Preference number: 4 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYKMLLS*IGPYLI
Trigger: AATAAGATAGGGACCTATTCAAGACAGCAGCATTTT...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACACCAGGAGGAATTGTTaGTTCTATGGGAATTCTATT +
Preference number: 4 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYTRRNC*FYGNSI
Trigger: AATAGAATTCCCATAGAATCAACAATTCCTCCTGGT...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTCTCGACACTCGCCACTaGCTGCACCTCCGCATCTTG +
Preference number: 4 (lower is better)
Translates to: STQITSHVFVKASSFIGFLDTRH*LHLRIL
Trigger: CAAGATGCGGAGGTGCAGGCAGTGGCGAGTGTCGAG...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACAAGAGTCAGATAGTTTaGAATCTGGGTCTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYKSQIV*NLGLFC
Trigger: ACAAAACAGACCCAGATTGCAAACTATCTGACTCTT...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGTACTACCTGAGGAGATaGAGGCTTCTTTTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: GPLFILPFHTTPILKAMLYYLRR*RLLFPC
Trigger: GCAAGGGAAAAGAAGCCTGCATCTCCTCAGGTAGTA...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACTGGAAAACACTGTGCTaGCTTCCTCTGAGCTTCTTA +
Preference number: 4 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHWKTLC*LPLSFL
Trigger: TAAGAAGCTCAGAGGAAGGCAGCACAGTGTTTTCCA...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp TGTCTCGGGACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAATCATGTATGTACATATaGCTGCCTGAATACAGAAAT +
Preference number: 4 (lower is better)
Translates to: CLGTHVSSGDTGGPRSQESCMYI*LPEYRN
Trigger: ATTTCTGTATTCAGGCAGGCATATGTACATACATGA...TTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp CGGGGAATGAGTTCAAAGAAGACAACCGGTGCCCCTCCAGCATCTAAGTCTGGTCACCTGAAAAGCCATTaGCATTCTTACACAGGAGAG +
Preference number: 4 (lower is better)
Translates to: RGMSSKKTTGAPPASKSGHLKSH*HSYTGE
Trigger: CTCTCCTGTGTAAGAATGCCAATGGCTTTTCAGGTG...ACCAGACTTAGATGCTGGAGGGGCACCGGTTGTCTTCTTTGAACTCATTCCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGTCCCACAGGACAACTTaGTTTCTCAGGTTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: GPLFILPFHTTPILKAMLSHRTT*FLRLLS
Trigger: AGAGAGCAACCTGAGAAACCAAGTTGTCCTGTGGGA...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp AATGCAGGGACAGCCTGTTCTAGCCACTTTACAGCAGAGGATTACCTGGGGCCAGCACTGATAGAAATCTaGTCAATGGCGGTAGCTTTC +
Preference number: 4 (lower is better)
Translates to: NAGTACSSHFTAEDYLGPALIEI*SMAVAF
Trigger: GAAAGCTACCGCCATTGACCAGATTTCTATCAGTGC...TGGCCCCAGGTAATCCTCTGCTGTAAAGTGGCTAGAACAGGCTGTCCCTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGTTCTGCAGCATGGACTaGAAAACACTGTGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: GPLFILPFHTTPILKAMLFCSMD*KTLCCL
Trigger: AAGGCAGCACAGTGTTTTCCAGTCCATGCTGCAGAA...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp AATGCAGGGACAGCCTGTTCTAGCCACTTTACAGCAGAGGATTACCTGGGGCCATTTCTAAACGCAAAATaGAGACCAGCACTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: NAGTACSSHFTAEDYLGPFLNAK*RPALPQ
Trigger: TTGGGGGAGTGCTGGTCTCCATTTTGCGTTTAGAAA...TGGCCCCAGGTAATCCTCTGCTGTAAAGTGGCTAGAACAGGCTGTCCCTGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGTATAATCAAGCTGGTAATCCTCTaGGCAGAGTTAACTGAATTG +
Preference number: 4 (lower is better)
Translates to: DTRLFWRHGRAKVPGSIIKLVIL*AELTEL
Trigger: CAATTCAGTTAACTCTGCCCAGAGGATTACCAGCTT...GATTATACTTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGAAGAATGAGAACATTTaGCTGGAAACGGCACCTAAT +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGKNENI*LETAPN
Trigger: ATTAGGTGCCGTTTCCAGCCAAATGTTCTCATTCTT...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR CAA 72 bp TCTGTTATTTGCCAGGTGGCAGCAGCTGACCCGAATTaGGAGAGAATCAACCAAAAAGGGCCACGCACAACA +
Preference number: 4 (lower is better)
Translates to: SVICQVAAADPN*ERINQKGPRTT
Trigger: TGTTGTGCGTGGCCCTTTTTGGTTGATTCTCTCCAAATTCGGGTCAGCTGCTGCCACCTGGCAAATAACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTGAGAGGATGAGTGACTaGCCACCCTGGCTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: STQITSHVFVKASSFIGFERMSD*PPWLLS
Trigger: TGACAGCAGCCAGGGTGGTCAGTCACTCATCCTCTC...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTGGAGTGAGTCCTACCTaGGCAGCAGCTGCTGTCACA +
Preference number: 4 (lower is better)
Translates to: STQITSHVFVKASSFIGFGVSPT*AAAAVT
Trigger: TGTGACAGCAGCTGCTGCTCAGGTAGGACTCACTCC...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACCATCTGAGACAGAAGTaGCACGAACACAACTACAAA +
Preference number: 4 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHHLRQK*HEHNYK
Trigger: TTTGTAGTTGTGTTCGTGTCACTTCTGTCTCAGATG...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGTTCAAGATAAACATATaGCAGCTGAAGCTGTCACAT +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGFKINI*QLKLSH
Trigger: ATGTGACAGCTTCAGCTGTCATATGTTTATCTTGAA...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGATGCCAATTAACATaGGTAAGCCCTTTCTACTCA +
Preference number: 4 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHGCQLT*VSPFYS
Trigger: TGAGTAGAAAGGGCTTACTCATGTTAATTGGCATCC...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGTCAAACAGCCCTTTCTaGCCTTCAAAAATAAAAGGA +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGSNSPF*PSKIKG
Trigger: TCCTTTTATTTTTGAAGGTCAGAAAGGGCTGTTTGA...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGAAGGCTTTTAACAATTaGGTGGTAAAGTTCAAGTGG +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGKAFNN*VVKFKW
Trigger: CCACTTGAACTTTACCACTCAATTGTTAAAAGCCTT...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTACTGACCACCCTGGCTaGTGTCACTGGAGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: STQITSHVFVKASSFIGFTDHPG*CHWSLH
Trigger: GTGCAGACTCCAGTGACAGCAGCCAGGGTGGTCAGT...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGCTCGACACTCGCCACTaGCTGCACCTCCGCATCTTG +
Preference number: 4 (lower is better)
Translates to: SRVRKYEYVWSESQRCALLDTRH*LHLRIL
Trigger: CAAGATGCGGAGGTGCAGGCAGTGGCGAGTGTCGAG...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGAAGAGTCAGATAGTTTaGAATCTGGGTCTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGKSQIV*NLGLFC
Trigger: ACAAAACAGACCCAGATTGCAAACTATCTGACTCTT...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGTCCCTGATTTGTCTTTaGAAATGGTTCTGGATCGCG +
Preference number: 4 (lower is better)
Translates to: GPLFILPFHTTPILKAMLSLICL*KWFWIA
Trigger: CGCGATCCAGAACCATTTGCAAAGACAAATCAGGGA...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGTTCAGAGTTGACACTTaGCAGCTAATGATTCTAATG +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGFRVDT*QLMILM
Trigger: CATTAGAATCATTAGCTGGCAAGTGTCAACTCTGAA...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp GACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGTATAATCCCTGTATTTTCACAATaGTCAGCTCTCATCATTCTC +
Preference number: 4 (lower is better)
Translates to: DTRLFWRHGRAKVPGSIIPVFSQ*SALIIL
Trigger: GAGAATGATGAGAGCTGAGCATTGTGAAAATACAGG...GATTATACTTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGGGATGTTCTTCTGTTTaGTACTCAACATTGAAGATG +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGGCSSV*YSTLKM
Trigger: CATCTTCAATGTTGAGTAGCAAACAGAAGAACATCC...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp TTTTGTGACAATCTCTTGAGTGTTGTAGAAGTGAAGAATTTGGTCCCAGCACCACATCTGACGCTGTGCTaGCAGCGGCACCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: FCDNLLSVVEVKNLVPAPHLTLC*QRHLLW
Trigger: CCAGAGAAGGTGCCGCTGCCAGCACAGCGTCAGATG...TGGTGCTGGGACCAAATTCTTCACTTCTACAACACTCAAGAGATTGTCACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp AATGCAGGGACAGCCTGTTCTAGCCACTTTACAGCAGAGGATTACCTGGGGCCAATTTCACTTTCAGCTTaGTTGGTCATCGTACTGGCT +
Preference number: 4 (lower is better)
Translates to: NAGTACSSHFTAEDYLGPISLSA*LVIVLA
Trigger: AGCCAGTACGATGACCAACCAAGCTGAAAGTGAAAT...TGGCCCCAGGTAATCCTCTGCTGTAAAGTGGCTAGAACAGGCTGTCCCTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTGAGAGCTCCAGTGTGTaGCTCCCACTGCTGTGGCAA +
Preference number: 4 (lower is better)
Translates to: STQITSHVFVKASSFIGFESSSV*LPLLWQ
Trigger: TTGCCACAGCAGTGGGAGCCACACACTGGAGCTCTC...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACCAAACTCAGATGGCCTaGTTTCAAATTTCCCCAATC +
Preference number: 4 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHQTQMA*FQISPI
Trigger: GATTGGGGAAATTTGAAACCAGGCCATCTGAGTTTG...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGAAGTATCTGAGGAAATaGATCTCCGGGTCTGGCTAT +
Preference number: 4 (lower is better)
Translates to: GPLFILPFHTTPILKAMLKYLRK*ISGSGY
Trigger: ATAGCCAGACCCGGAGATCCATTTCCTCAGATACTT...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGGACGGACGCAGCAGTTaGGGCGTCGGAAGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: SRVRKYEYVWSESQRCALDGRSS*GVGSSA
Trigger: TGCAGAACTTCCGACGCCCCAACTGCTGCGTCCGTC...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCTCCAGGCCAGTGCCTTaGAGGATACTCATGTGTCTC +
Preference number: 4 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLSRPVP*RILMCL
Trigger: GAGACACATGAGTATCCTCCAAGGCACTGGCCTGGA...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGTTTCTAAACGCAAAATaGAGACCAGCACTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: GPLFILPFHTTPILKAMLFLNAK*RPALPQ
Trigger: TTGGGGGAGTGCTGGTCTCCATTTTGCGTTTAGAAA...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACAATAGATGCATTTGCTaGTATAACTGCCTCTTTTTG +
Preference number: 4 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYNRCIC*YNCLFL
Trigger: CAAAAAGAGGCAGTTATACCAGCAAATGCATCTATT...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACTTAGAAGTGCCCATCTaGAGCATCGTTTTCTGTAAG +
Preference number: 4 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHLEVPI*SIVFCK
Trigger: CTTACAGAAAACGATGCTCCAGATGGGCACTTCTAA...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGAGGTTGAGACATAGATaGAAGTGCCCAGCAAAACGT +
Preference number: 4 (lower is better)
Translates to: GPLFILPFHTTPILKAMLRLRHR*KCPAKR
Trigger: ACGTTTTGCTGGGCACTTCCATCTATGTCTCAACCT...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp AGGCCTCTTCTTTCATTGGGTTTGAAGGATATTATGGGTATTTCTCTTAAAATCTGGTCGATGCCGAGGTaGGGCAGCCTGTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: RPLLSLGLKDIMGISLKIWSMPR*GSLWLS
Trigger: GGAGAGCCACAGGCTGCCTCACCTCGGCATCGACCA...GATTTTAAGAGAAATACCCATAATATCCTTCAAACCCAATGAAAGAAGAGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp TTTTGTGACAATCTCTTGAGTGTTGTAGAAGTGAAGAATTTGGTCCCAGCACCAGATCTTTGCTGCTACTaGGGACGCCTCCCACAGGAC +
Preference number: 4 (lower is better)
Translates to: FCDNLLSVVEVKNLVPAPDLCCY*GRLPQD
Trigger: GTCCTGTGGGAGGCGTCCTCAGTAGCAGCAAAGATC...TGGTGCTGGGACCAAATTCTTCACTTCTACAACACTCAAGAGATTGTCACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp ACCAAGAATAAATGTTTAAGTATGCAAGAGTTAGAGAATGGCAGCCACAGGGCAGAGAGGATGAGTGACTaGCCACCCTGGCTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: TKNKCLSMQELENGSHRAERMSD*PPWLLS
Trigger: TGACAGCAGCCAGGGTGGTCAGTCACTCATCCTCTC...TGCCCTGTGGCTGCCATTCTCTAACTCTTGCATACTTAAACATTTATTCTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp TTTTGTGACAATCTCTTGAGTGTTGTAGAAGTGAAGAATTTGGTCCCAGCACCATTGAACCTTGACATCTaGCGCTGTGCTGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: FCDNLLSVVEVKNLVPAPLNLDI*RCAGSG
Trigger: GCCGCTGCCAGCACAGCGTCAGATGTCAAGGTTCAA...TGGTGCTGGGACCAAATTCTTCACTTCTACAACACTCAAGAGATTGTCACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTCCTTCAGAAATGCAGTaGGGATACTGGGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: STQITSHVFVKASSFIGFPSEMQ*GYWGWW
Trigger: CCACCAGCCCCAGTATCCTCACTGCATTTCTGAAGG...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp GACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGTATAATCAAAATGCTGCTGTCTTaGATAGGTCCCTATCTTATT +
Preference number: 4 (lower is better)
Translates to: DTRLFWRHGRAKVPGSIIKMLLS*IGPYLI
Trigger: AATAAGATAGGGACCTATTCAAGACAGCAGCATTTT...GATTATACTTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCGGGAAATACCATTCTTaGGATGCCAGTACTCCCACC +
Preference number: 4 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLGKYHS*DASTPT
Trigger: GGTGGGAGTACTGGCATCTCAAGAATGGTATTTCCC...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGCTCCAAATTTCATGTTaGAATTTGGAGGTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: GPLFILPFHTTPILKAMLLQISC*NLEVGS
Trigger: AGACCCCACCTCCAAATTTCAACATGAAATTTGGAG...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGTGGACCTGGGGGACATaGCGAAGGTTCGCTAGTGAG +
Preference number: 4 (lower is better)
Translates to: SRVRKYEYVWSESQRCALWTWGT*RRFASE
Trigger: CTCACTAGCGAACCTTCGGCATGTCCCCCAGGTCCA...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp ACCAAGAATAAATGTTTAAGTATGCAAGAGTTAGAGAATGGCAGCCACAGGGCATGGACCTGGGGGACATaGCGAAGGTTCGCTAGTGAG +
Preference number: 4 (lower is better)
Translates to: TKNKCLSMQELENGSHRAWTWGT*RRFASE
Trigger: CTCACTAGCGAACCTTCGGCATGTCCCCCAGGTCCA...TGCCCTGTGGCTGCCATTCTCTAACTCTTGCATACTTAAACATTTATTCTTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGAGGCTTCTTTTCCCTTaGATCTCCTTTATTAGTGGG +
Preference number: 4 (lower is better)
Translates to: GPLFILPFHTTPILKAMLRLLFP*ISFISG
Trigger: CCCACTAATAAAGGAGATGCAAGGGAAAAGAAGCCT...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp CGGGGAATGAGTTCAAAGAAGACAACCGGTGCCCCTCCAGCATCTAAGTCTGGTCCAGCTACAGTATTATaGACGACATATTGTTCACAC +
Preference number: 4 (lower is better)
Translates to: RGMSSKKTTGAPPASKSGPATVL*TTYCSH
Trigger: GTGTGAACAATATGTCGTGCATAATACTGTAGCTGG...ACCAGACTTAGATGCTGGAGGGGCACCGGTTGTCTTCTTTGAACTCATTCCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGTATGTACATATGCCTaGCTGAATACAGAAATTGGC +
Preference number: 4 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHVCTYA*LNTEIG
Trigger: GCCAATTTCTGTATTCAGGCAGGCATATGTACATAC...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTGCGAACTTGGCTCACTaGAACCTCTGCTTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: STQITSHVFVKASSFIGFANLAH*NLCFPG
Trigger: ACCTGGGAAGCAGAGGTTGCAGTGAGCCAAGTTCGC...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp TTTTGTGACAATCTCTTGAGTGTTGTAGAAGTGAAGAATTTGGTCCCAGCACCACACCTTCTCTGGACCTaGGGGACATGCCGAAGGTTC +
Preference number: 4 (lower is better)
Translates to: FCDNLLSVVEVKNLVPAPHLLWT*GTCRRF
Trigger: GAACCTTCGGCATGTCCCCCAGGTCCAGAGAAGGTG...TGGTGCTGGGACCAAATTCTTCACTTCTACAACACTCAAGAGATTGTCACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GCATCGTTTTCTGTAAGGCATCATTTGAAGCCTCTTTGGATACAAGATCTCATGGGATACTGGGGCTGGTaGAGACGGATCTGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: ASFSVRHHLKPLWIQDLMGYWGW*RRICSR
Trigger: TCGAGAGCAGATCCGTCTCCACCAGCCCCAGTATCC...CATGAGATCTTGTATCCAAAGAGGCTTCAAATGATGCCTTACAGAAAACGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp TTTTGTGACAATCTCTTGAGTGTTGTAGAAGTGAAGAATTTGGTCCCAGCACCAGAGAGCTCCAGTGTGTaGCTCCCACTGCTGTGGCAA +
Preference number: 4 (lower is better)
Translates to: FCDNLLSVVEVKNLVPAPESSSV*LPLLWQ
Trigger: TTGCCACAGCAGTGGGAGCCACACACTGGAGCTCTC...TGGTGCTGGGACCAAATTCTTCACTTCTACAACACTCAAGAGATTGTCACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp CGGGGAATGAGTTCAAAGAAGACAACCGGTGCCCCTCCAGCATCTAAGTCTGGTAGTTTATTTTCCCGTTaGAAAGCTGTAGACTCAGCT +
Preference number: 4 (lower is better)
Translates to: RGMSSKKTTGAPPASKSGSLFSR*KAVDSA
Trigger: AGCTGAGTCTACAGCTTTCCAACGGGAAAATAAACT...ACCAGACTTAGATGCTGGAGGGGCACCGGTTGTCTTCTTTGAACTCATTCCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GCATCGTTTTCTGTAAGGCATCATTTGAAGCCTCTTTGGATACAAGATCTCATGGGCTGGAGTCACCCATaGGATCAGATGGCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: ASFSVRHHLKPLWIQDLMGWSHP*DQMAGS
Trigger: TGAGCCTGCCATCTGATCCCATGGGTGACTCCAGCC...CATGAGATCTTGTATCCAAAGAGGCTTCAAATGATGCCTTACAGAAAACGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp ACCAAGAATAAATGTTTAAGTATGCAAGAGTTAGAGAATGGCAGCCACAGGGCATGCCAGAACCTGGGCTaGAGTCACCCATGGGATCAG +
Preference number: 4 (lower is better)
Translates to: TKNKCLSMQELENGSHRACQNLG*SHPWDQ
Trigger: CTGATCCCATGGGTGACTCCAGCCCAGGTTCTGGCA...TGCCCTGTGGCTGCCATTCTCTAACTCTTGCATACTTAAACATTTATTCTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACTCAGTAGAATATCACTaGAGAACACCTGCACAGTAT +
Preference number: 4 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHSVEYH*RTPAQY
Trigger: ATACTGTGCAGGTGTTCTCCAGTGATATTCTACTGA...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp AATGCAGGGACAGCCTGTTCTAGCCACTTTACAGCAGAGGATTACCTGGGGCCATCAGTAGAATATCACTaGAGAACACCTGCACAGTAT +
Preference number: 4 (lower is better)
Translates to: NAGTACSSHFTAEDYLGPSVEYH*RTPAQY
Trigger: ATACTGTGCAGGTGTTCTCCAGTGATATTCTACTGA...TGGCCCCAGGTAATCCTCTGCTGTAAAGTGGCTAGAACAGGCTGTCCCTGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGCATTTGAAGCCTCTTTaGATACAAGATCTCATGTTT +
Preference number: 4 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGHLKPL*IQDLMF
Trigger: AAACATGAGATCTTGTATCCAAAGAGGCTTCAAATG...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp GACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGTATAATCAACAAGCAAATGCTTTaGAGCCCTTTAAGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: DTRLFWRHGRAKVPGSIINKQML*SPLRSL
Trigger: AAGACTTCTTAAAGGGCTCCAAAGCATTTGCTTGTT...GATTATACTTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGTGGTGGGAGGTGTTTTaGTTTACTCAGCCAAAGAAT +
Preference number: 4 (lower is better)
Translates to: GPLFILPFHTTPILKAMLWWEVF*FTQPKN
Trigger: ATTCTTTGGCTGAGTAAACCAAAACACCTCCCACCA...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp TTTTGTGACAATCTCTTGAGTGTTGTAGAAGTGAAGAATTTGGTCCCAGCACCAGACTGGCAGGTGTGCTaGTTGGCGGGCATTGTCAAT +
Preference number: 4 (lower is better)
Translates to: FCDNLLSVVEVKNLVPAPDWQVC*LAGIVN
Trigger: ATTGACAATGCCCGCCAATCAGCACACCTGCCAGTC...TGGTGCTGGGACCAAATTCTTCACTTCTACAACACTCAAGAGATTGTCACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp TTTTGTGACAATCTCTTGAGTGTTGTAGAAGTGAAGAATTTGGTCCCAGCACCACCTTCAGAAATGCAGTaGGGATACTGGGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: FCDNLLSVVEVKNLVPAPPSEMQ*GYWGWW
Trigger: CCACCAGCCCCAGTATCCTCACTGCATTTCTGAAGG...TGGTGCTGGGACCAAATTCTTCACTTCTACAACACTCAAGAGATTGTCACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCACAGATACTGTGAATTaGCTGTACCCACGGGACACA +
Preference number: 4 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLTDTVN*LYPRDT
Trigger: TGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGT...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp TTTTGTGACAATCTCTTGAGTGTTGTAGAAGTGAAGAATTTGGTCCCAGCACCACCTGGCAGAGGCATCTaGGACAGAAGTGACACGAAC +
Preference number: 4 (lower is better)
Translates to: FCDNLLSVVEVKNLVPAPPGRGI*DRSDTN
Trigger: GTTCGTGTCACTTCTGTCTCAGATGCCTCTGCCAGG...TGGTGCTGGGACCAAATTCTTCACTTCTACAACACTCAAGAGATTGTCACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGCTTCATCTGTTGAATaGACCTTAGGTTTCACAAAT +
Preference number: 4 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHASSVE*TLGFTN
Trigger: ATTTGTGAAACCTAAGGTTCATTCAACAGATGAAGC...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp AATGCAGGGACAGCCTGTTCTAGCCACTTTACAGCAGAGGATTACCTGGGGCCAACATGGAAAATCAACTaGTTCTGCACATTCATGGTT +
Preference number: 4 (lower is better)
Translates to: NAGTACSSHFTAEDYLGPTWKIN*FCTFMV
Trigger: AACCATGAATGTGCAGAATCAGTTGATTTTCCATGT...TGGCCCCAGGTAATCCTCTGCTGTAAAGTGGCTAGAACAGGCTGTCCCTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACAAACAAGAGGTATTTTaGGTTCACAATCAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHKQEVF*VHNQSS
Trigger: ACTGGACTGATTGTGAACTCAAAATACCTCTTGTTT...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp GCATCGTTTTCTGTAAGGCATCATTTGAAGCCTCTTTGGATACAAGATCTCATGGGGGGCTTTGGGTGGTaGTTAGATGGTGGTCACAGA +
Preference number: 4 (lower is better)
Translates to: ASFSVRHHLKPLWIQDLMGGFGW*LDGGHR
Trigger: TCTGTGACCACCATCTAATCACCACCCAAAGCCCCC...CATGAGATCTTGTATCCAAAGAGGCTTCAAATGATGCCTTACAGAAAACGATGC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCGTGGCAGGTGCTTTCTaGACTTCATTGAACACACCA +
Preference number: 4 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLVAGAF*TSLNTP
Trigger: TGGTGTGTTCAATGAAGTGCAGAAAGCACCTGCCAC...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTGGGCGTCGGAAGTTCTaGAGCATGGACTGGAAAACA +
Preference number: 4 (lower is better)
Translates to: STQITSHVFVKASSFIGFGRRKF*SMDWKT
Trigger: TGTTTTCCAGTCCATGCTGCAGAACTTCCGACGCCC...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp TTTTGTGACAATCTCTTGAGTGTTGTAGAAGTGAAGAATTTGGTCCCAGCACCATTCTCAAGGCGATGCTaGTCATCCAGGCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: FCDNLLSVVEVKNLVPAPFSRRC*SSRPVP
Trigger: AGGCACTGGCCTGGATGAGCAGCATCGCCTTGAGAA...TGGTGCTGGGACCAAATTCTTCACTTCTACAACACTCAAGAGATTGTCACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGTTCTCAAGGCGATGCTaGTCATCCAGGCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: SRVRKYEYVWSESQRCALFSRRC*SSRPVP
Trigger: AGGCACTGGCCTGGATGAGCAGCATCGCCTTGAGAA...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTCAATTCTCAAGGCGATaGTGCTCATCCAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: STQITSHVFVKASSFIGFQFSRR*CSSRPV
Trigger: CACTGGCCTGGATGAGCAGCATCGCCTTGAGAATTG...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp AGGCCTCTTCTTTCATTGGGTTTGAAGGATATTATGGGTATTTCTCTTAAAATCCACTGGCTGGACTCCTaGGGGGCTAGCGTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: RPLLSLGLKDIMGISLKIHWLDS*GASVLS
Trigger: TGACAGCACGCTAGCCCCCCAGGAGTCCAGCCAGTG...GATTTTAAGAGAAATACCCATAATATCCTTCAAACCCAATGAAAGAAGAGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCCTGGTTCTTCCTAATTaGGGAGGGTGTAGGATTAGC +
Preference number: 4 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLLVLPN*GGCRIS
Trigger: GCTAATCCTACACCCTCCCCAATTAGGAAGAACCAG...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp TTTTGTGACAATCTCTTGAGTGTTGTAGAAGTGAAGAATTTGGTCCCAGCACCAGTTTCAGCTGGAGCTTaGAGTCTGCGCCAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: FCDNLLSVVEVKNLVPAPVSAGA*SLRQAA
Trigger: AGCAGCTTGGCGCAGACTCCAAGCTCCAGCTGAAAC...TGGTGCTGGGACCAAATTCTTCACTTCTACAACACTCAAGAGATTGTCACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGAGGTTATTTTGTTGTaGCAAGTGAGTAGTTTAGCT +
Preference number: 4 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHEVILL*QVSSLA
Trigger: AGCTAAACTACTCACTTGCCACAACAAAATAACCTC...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp AATGCAGGGACAGCCTGTTCTAGCCACTTTACAGCAGAGGATTACCTGGGGCCAATAACTGCCTCTTTTTaGCACATTATTGCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: NAGTACSSHFTAEDYLGPITASF*HIIAWL
Trigger: AAGCCAAGCAATAATGTGCCAAAAAGAGGCAGTTAT...TGGCCCCAGGTAATCCTCTGCTGTAAAGTGGCTAGAACAGGCTGTCCCTGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGATGAGAACATTTGGCTaGAAACGGCACCTAATGAAA +
Preference number: 4 (lower is better)
Translates to: GPLFILPFHTTPILKAMLMRTFG*KRHLMK
Trigger: TTTCATTAGGTGCCGTTTCCAGCCAAATGTTCTCAT...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTAACTCACAGGACACCTaGTCTTTGCTGCTACTGAGG +
Preference number: 4 (lower is better)
Translates to: STQITSHVFVKASSFIGFNSQDT*SLLLLR
Trigger: CCTCAGTAGCAGCAAAGATCAGGTGTCCTGTGAGTT...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGATTTCTCATGTTCCCTaGTTTGTCTTTGCAAATGGT +
Preference number: 4 (lower is better)
Translates to: GPLFILPFHTTPILKAMLISHVP*FVFANG
Trigger: ACCATTTGCAAAGACAAATCAGGGAACATGAGAAAT...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCGTTTGTCGTTTTCTCTaGAAACTCAGATGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLVCRFL*KLRWPG
Trigger: ACCAGGCCATCTGAGTTTGCAGAGAAAACGACAAAC...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp ACCAAGAATAAATGTTTAAGTATGCAAGAGTTAGAGAATGGCAGCCACAGGGCACTCTGCGTCCAAGGATaGACCATACACTTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: TKNKCLSMQELENGSHRALCVQG*TIHFPG
Trigger: ACCTGGGAAGTGTATGGTGCATCCTTGGACGCAGAG...TGCCCTGTGGCTGCCATTCTCTAACTCTTGCATACTTAAACATTTATTCTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGGGGCGTCGGAAGTTCTaGAGCATGGACTGGAAAACA +
Preference number: 4 (lower is better)
Translates to: SRVRKYEYVWSESQRCALGRRKF*SMDWKT
Trigger: TGTTTTCCAGTCCATGCTGCAGAACTTCCGACGCCC...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp TTTTGTGACAATCTCTTGAGTGTTGTAGAAGTGAAGAATTTGGTCCCAGCACCATCCCCCAACAATATCTaGAGGAAGGGAAGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: FCDNLLSVVEVKNLVPAPSPNNI*RKGRLP
Trigger: GGGAAGCCTTCCCTTCCTGCAGATATTGTTGGGGGA...TGGTGCTGGGACCAAATTCTTCACTTCTACAACACTCAAGAGATTGTCACAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp CGGGGAATGAGTTCAAAGAAGACAACCGGTGCCCCTCCAGCATCTAAGTCTGGTGTTACTGAATACATGTaGACACTTTTGTTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: RGMSSKKTTGAPPASKSGVTEYM*TLLLAL
Trigger: TAAAGCCAACAAAAGTGTGCACATGTATTCAGTAAC...ACCAGACTTAGATGCTGGAGGGGCACCGGTTGTCTTCTTTGAACTCATTCCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGCAGTCATGGAAATATaGAACTTTCAATTAGTGGTT +
Preference number: 4 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHAVMEI*NFQLVV
Trigger: AACCACTAATTGAAAGTTGCATATTTCCATGACTGC...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp AGGCCTCTTCTTTCATTGGGTTTGAAGGATATTATGGGTATTTCTCTTAAAATCACCCATGGGATCAGATaGCAGGCTCAGGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: RPLLSLGLKDIMGISLKITHGIR*QAQAGG
Trigger: GCCACCAGCCTGAGCCTGCCATCTGATCCCATGGGT...GATTTTAAGAGAAATACCCATAATATCCTTCAAACCCAATGAAAGAAGAGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGGAACACAACTACAAATaGGTATTTAAGGCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: GPLFILPFHTTPILKAMLEHNYK*VFKAQR
Trigger: TCTTTGGGCCTTAAATACCCATTTGTAGTTGTGTTC...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGGTGGTAAAGTTCAAGTaGAAGAAAGCAAAACTCAGA +
Preference number: 4 (lower is better)
Translates to: GPLFILPFHTTPILKAMLVVKFK*KKAKLR
Trigger: TCTGAGTTTTGCTTTCTTCCACTTGAACTTTACCAC...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp TTTTGTGACAATCTCTTGAGTGTTGTAGAAGTGAAGAATTTGGTCCCAGCACCATTCTGCAGGGGCACCTaGAAAGCCATTGGCATTCTT +
Preference number: 4 (lower is better)
Translates to: FCDNLLSVVEVKNLVPAPFCRGT*KAIGIL
Trigger: AAGAATGCCAATGGCTTTTCAGGTGCCCCTGCAGAA...TGGTGCTGGGACCAAATTCTTCACTTCTACAACACTCAAGAGATTGTCACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp AGGCCTCTTCTTTCATTGGGTTTGAAGGATATTATGGGTATTTCTCTTAAAATCGTGATGGCATTGGGCTaGTCACCTGGGATGGACTGG +
Preference number: 4 (lower is better)
Translates to: RPLLSLGLKDIMGISLKIVMALG*SPGMDW
Trigger: CCAGTCCATCCCAGGTGATCAGCCCAATGCCATCAC...GATTTTAAGAGAAATACCCATAATATCCTTCAAACCCAATGAAAGAAGAGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp AGGCCTCTTCTTTCATTGGGTTTGAAGGATATTATGGGTATTTCTCTTAAAATCGGAGTGAGTCCTACCTaGGCAGCAGCTGCTGTCACA +
Preference number: 4 (lower is better)
Translates to: RPLLSLGLKDIMGISLKIGVSPT*AAAAVT
Trigger: TGTGACAGCAGCTGCTGCTCAGGTAGGACTCACTCC...GATTTTAAGAGAAATACCCATAATATCCTTCAAACCCAATGAAAGAAGAGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTACAGATACTGTGAATTaGCTGTACCCACGGGACACA +
Preference number: 4 (lower is better)
Translates to: STQITSHVFVKASSFIGFTDTVN*LYPRDT
Trigger: TGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGT...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp ACCAAGAATAAATGTTTAAGTATGCAAGAGTTAGAGAATGGCAGCCACAGGGCATATATAGGGTACACCTaGTGGCTCTGGGTAAGAGGC +
Preference number: 4 (lower is better)
Translates to: TKNKCLSMQELENGSHRAYIGYT*WLWVRG
Trigger: GCCTCTTACCCAGAGCCATCAGGTGTACCCTATATA...TGCCCTGTGGCTGCCATTCTCTAACTCTTGCATACTTAAACATTTATTCTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGGGCTCTTTTGCAGTTTaGTTGAGAGACGTCAAGCGG +
Preference number: 4 (lower is better)
Translates to: SRVRKYEYVWSESQRCALGSFAV*LRDVKR
Trigger: CCGCTTGACGTCTCTCAATCAAACTGCAAAAGAGCC...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCTTCTTTTCCGGAAGCTaGAATCAGGGAAGTTTTAGC +
Preference number: 4 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLFFSGS*NQGSFS
Trigger: GCTAAAACTTCCCTGATTGCAGCTTCCGGAAAAGAA...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTGTGGCAGGTGCTTTCTaGACTTCATTGAACACACCA +
Preference number: 4 (lower is better)
Translates to: STQITSHVFVKASSFIGFVAGAF*TSLNTP
Trigger: TGGTGTGTTCAATGAAGTGCAGAAAGCACCTGCCAC...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCGTTGAATGTGGCAGGTaGTTTCTGCACTTCATTGAA +
Preference number: 4 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLVECGR*FLHFIE
Trigger: TTCAATGAAGTGCAGAAAGCACCTGCCACATTCAAC...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp ACCAAGAATAAATGTTTAAGTATGCAAGAGTTAGAGAATGGCAGCCACAGGGCACTGGAGCTTGGAGTCTaGGCCAAGCTGCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: TKNKCLSMQELENGSHRALELGV*AKLLFL
Trigger: AAGAAAAAGCAGCTTGGCGCAGACTCCAAGCTCCAG...TGCCCTGTGGCTGCCATTCTCTAACTCTTGCATACTTAAACATTTATTCTTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGTCAGAATCACAGAGATaGGCCTTGCCTTCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: SRVRKYEYVWSESQRCALSESQR*ALPSVQ
Trigger: CTGCACTGAAGGCAAGGCGCATCTCTGTGATTCTGA...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGATTTGCTGGTATAACTaGCTCTTTTTGGCACATTAT +
Preference number: 4 (lower is better)
Translates to: GPLFILPFHTTPILKAMLICWYN*LFLAHY
Trigger: ATAATGTGCCAAAAAGAGGCAGTTATACCAGCAAAT...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp AGGCCTCTTCTTTCATTGGGTTTGAAGGATATTATGGGTATTTCTCTTAAAATCACAGAAGTTGTGCCTTaGGGGCCCGAGGCAGTGACA +
Preference number: 4 (lower is better)
Translates to: RPLLSLGLKDIMGISLKITEVVP*GPEAVT
Trigger: TGTCACTGCCTCGGGCCCCCAAGGCACAACTTCTGT...GATTTTAAGAGAAATACCCATAATATCCTTCAAACCCAATGAAAGAAGAGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp AGGCCTCTTCTTTCATTGGGTTTGAAGGATATTATGGGTATTTCTCTTAAAATCGCAGGCTCAGGCTGGTaGCTGTCTTGGTCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: RPLLSLGLKDIMGISLKIAGSGW*LSWSVC
Trigger: ACAGACAGACCAAGACAGCCACCAGCCTGAGCCTGC...GATTTTAAGAGAAATACCCATAATATCCTTCAAACCCAATGAAAGAAGAGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGGACTACATTTGTTACTaGAAGTTACTGAACCCAATT +
Preference number: 4 (lower is better)
Translates to: GPLFILPFHTTPILKAMLDYICY*KLLNPI
Trigger: AATTGGGTTCAGTAACTTCCAGTAACAAATGTAGTC...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GCATCGTTTTCTGTAAGGCATCATTTGAAGCCTCTTTGGATACAAGATCTCATGGTCAAACTGGGGATATaGCTGGGCTTTCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: ASFSVRHHLKPLWIQDLMVKLGI*LGFPSP
Trigger: AGGAGATGGAAAGCCCAGCCATATCCCCAGTTTGAC...CATGAGATCTTGTATCCAAAGAGGCTTCAAATGATGCCTTACAGAAAACGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp GCATCGTTTTCTGTAAGGCATCATTTGAAGCCTCTTTGGATACAAGATCTCATGTTTGGAGGTGGGGTCTaGTGGGAGGTGTTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: ASFSVRHHLKPLWIQDLMFGGGV*WEVFWF
Trigger: AAACCAAAACACCTCCCACCAGACCCCACCTCCAAA...CATGAGATCTTGTATCCAAAGAGGCTTCAAATGATGCCTTACAGAAAACGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR CAA 72 bp AGTAGGCCCTCACCAGACACCAAATTGGCCTTGATTTaGGGGTTCCCAGCTTCCAAAACTGTAAGAAATAAA +
Preference number: 4 (lower is better)
Translates to: SRPSPDTKLALI*GFPASKTVRNK
Trigger: TTTATTTCTTACAGTTTTGGAAGCTGGGAACCCCAAAATCAAGGCCAATTTGGTGTCTGGTGAGGGCCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp AGGCCTCTTCTTTCATTGGGTTTGAAGGATATTATGGGTATTTCTCTTAAAATCGACTGGCAGGTGTGCTaGTTGGCGGGCATTGTCAAT +
Preference number: 4 (lower is better)
Translates to: RPLLSLGLKDIMGISLKIDWQVC*LAGIVN
Trigger: ATTGACAATGCCCGCCAATCAGCACACCTGCCAGTC...GATTTTAAGAGAAATACCCATAATATCCTTCAAACCCAATGAAAGAAGAGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTTGCTGGGAACTTCCTTaGTTTCACTTTCAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: STQITSHVFVKASSFIGFCWELP*FHFQLG
Trigger: ACCAAGCTGAAAGTGAAATCAAGGAAGTTCCCAGCA...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp TTTTGTGACAATCTCTTGAGTGTTGTAGAAGTGAAGAATTTGGTCCCAGCACCAGAGCTTTTTAGCAGTTaGCTCTTCCCTCACTGGAGT +
Preference number: 4 (lower is better)
Translates to: FCDNLLSVVEVKNLVPAPELFSS*LFPHWS
Trigger: ACTCCAGTGAGGGAAGAGTCAACTGCTAAAAAGCTC...TGGTGCTGGGACCAAATTCTTCACTTCTACAACACTCAAGAGATTGTCACAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTAAACTAAGCAAGCTTTaGCATAGAGGGACGCATGTG +
Preference number: 4 (lower is better)
Translates to: STQITSHVFVKASSFIGFKLSKL*HRGTHV
Trigger: CACATGCGTCCCTCTATGTCAAAGCTTGCTTAGTTT...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTACTCACAGAATGTATTaGCATACCACGACCAGCTAC +
Preference number: 4 (lower is better)
Translates to: STQITSHVFVKASSFIGFTHRMY*HTTTSY
Trigger: GTAGCTGGTCGTGGTATGTCAATACATTCTGTGAGT...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCAAGCCTCCCAGTTTATaGTACTTTATTATAGCAGCC +
Preference number: 4 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLKPPSL*YFIIAA
Trigger: GGCTGCTATAATAAAGTATCATAAACTGGGAGGCTT...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp ACCAAGAATAAATGTTTAAGTATGCAAGAGTTAGAGAATGGCAGCCACAGGGCACTTTTGCAGTTTGATTaGGAGACGTCAAGCGGGACT +
Preference number: 4 (lower is better)
Translates to: TKNKCLSMQELENGSHRALLQFD*ETSSGT
Trigger: AGTCCCGCTTGACGTCTCTCAATCAAACTGCAAAAG...TGCCCTGTGGCTGCCATTCTCTAACTCTTGCATACTTAAACATTTATTCTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp GCATCGTTTTCTGTAAGGCATCATTTGAAGCCTCTTTGGATACAAGATCTCATGGAACCCAGGGTCCTTTaGTTCCAAGCCCAGATATTT +
Preference number: 4 (lower is better)
Translates to: ASFSVRHHLKPLWIQDLMEPRVL*FQAQIF
Trigger: AAATATCTGGGCTTGGAATCAAAGGACCCTGGGTTC...CATGAGATCTTGTATCCAAAGAGGCTTCAAATGATGCCTTACAGAAAACGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp GCATCGTTTTCTGTAAGGCATCATTTGAAGCCTCTTTGGATACAAGATCTCATGTCTTTGATTCGAAGCTaGGATTTGAACCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: ASFSVRHHLKPLWIQDLMSLIRS*DLNPGS
Trigger: GGACCCTGGGTTCAAATCTCAGCTTCGAATCAAAGA...CATGAGATCTTGTATCCAAAGAGGCTTCAAATGATGCCTTACAGAAAACGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGGCTTTCCTTCAGAAATaGAGTGAGGATACTGGGGCT +
Preference number: 4 (lower is better)
Translates to: SRVRKYEYVWSESQRCALAFLQK*SEDTGA
Trigger: AGCCCCAGTATCCTCACTGCATTTCTGAAGGAAAGC...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGTGCTCTTGTTCAAAATaGTCAGGAGCACGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: SRVRKYEYVWSESQRCALCSCSK*SGARLS
Trigger: GGAAAGCCGTGCTCCTGAGCATTTTGAACAAGAGCA...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGGAGTCTGCGCCAAGCTaGTTTTTCTTATCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SRVRKYEYVWSESQRCALESAPS*FFLSPG
Trigger: TCCAGGAGATAAGAAAAAGCAGCTTGGCGCAGACTC...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCTGTGCCCATAATAGATaGATTTGCTGGTATAACTGC +
Preference number: 4 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLCAHNR*ICWYNC
Trigger: GCAGTTATACCAGCAAATGCATCTATTATGGGCACA...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTTACTTCCAGTTCCACTaGAGATTCCTAGCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: STQITSHVFVKASSFIGFYFQFH*RFLAEA
Trigger: AGCTTCTGCTAGGAATCTGCAGTGGAACTGGAAGTA...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp ACCAAGAATAAATGTTTAAGTATGCAAGAGTTAGAGAATGGCAGCCACAGGGCAAGACATAGATGGAAGTaGCCAGCAAAACGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: TKNKCLSMQELENGSHRARHRWK*PAKRLA
Trigger: TGCCAGACGTTTTGCTGGGCACTTCCATCTATGTCT...TGCCCTGTGGCTGCCATTCTCTAACTCTTGCATACTTAAACATTTATTCTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTCTCTGCAAACTCAGATaGCCTGGTTTCAAATTTCCC +
Preference number: 4 (lower is better)
Translates to: STQITSHVFVKASSFIGFLCKLR*PGFKFP
Trigger: GGGAAATTTGAAACCAGGCCATCTGAGTTTGCAGAG...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GCATCGTTTTCTGTAAGGCATCATTTGAAGCCTCTTTGGATACAAGATCTCATGCTGGTTCTTCCTAATTaGGGAGGGTGTAGGATTAGC +
Preference number: 4 (lower is better)
Translates to: ASFSVRHHLKPLWIQDLMLVLPN*GGCRIS
Trigger: GCTAATCCTACACCCTCCCCAATTAGGAAGAACCAG...CATGAGATCTTGTATCCAAAGAGGCTTCAAATGATGCCTTACAGAAAACGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp TTTTGTGACAATCTCTTGAGTGTTGTAGAAGTGAAGAATTTGGTCCCAGCACCATCTAAGGTGCTCTCCTaGTTCTTCCTAATTGGGGAG +
Preference number: 4 (lower is better)
Translates to: FCDNLLSVVEVKNLVPAPSKVLS*FFLIGE
Trigger: CTCCCCAATTAGGAAGAACCAGGAGAGCACCTTAGA...TGGTGCTGGGACCAAATTCTTCACTTCTACAACACTCAAGAGATTGTCACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp AGGCCTCTTCTTTCATTGGGTTTGAAGGATATTATGGGTATTTCTCTTAAAATCCAGCAGAGGATTACCTaGGGCCACCCATCTGGAGTA +
Preference number: 4 (lower is better)
Translates to: RPLLSLGLKDIMGISLKIQQRIT*GHPSGV
Trigger: TACTCCAGATGGGTGGCCCCAGGTAATCCTCTGCTG...GATTTTAAGAGAAATACCCATAATATCCTTCAAACCCAATGAAAGAAGAGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GCATCGTTTTCTGTAAGGCATCATTTGAAGCCTCTTTGGATACAAGATCTCATGAGTAGGCAGAAAGGCTaGAGCTATATAGGGTACACC +
Preference number: 4 (lower is better)
Translates to: ASFSVRHHLKPLWIQDLMSRQKG*SYIGYT
Trigger: GGTGTACCCTATATAGCTCCAGCCTTTCTGCCTACT...CATGAGATCTTGTATCCAAAGAGGCTTCAAATGATGCCTTACAGAAAACGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR CAA 72 bp ACTGATCACTCAGACTGTACACACTCACAGAATGTATaGACATACCACGACCAGCTACAGTATTATGCACGA +
Preference number: 4 (lower is better)
Translates to: TDHSDCTHSQNV*TYHDQLQYYAR
Trigger: TCGTGCATAATACTGTAGCTGGTCGTGGTATGTCAATACATTCTGTGAGTGTGTACAGTCTGAGTGATCAGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp AGGCCTCTTCTTTCATTGGGTTTGAAGGATATTATGGGTATTTCTCTTAAAATCAAGCCAGCAAGACTTTaGGTGGCTCCTCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: RPLLSLGLKDIMGISLKIKPARL*VAPLPS
Trigger: AGAGGGAAGAGGAGCCACTCAAAGTCTTGCTGGCTT...GATTTTAAGAGAAATACCCATAATATCCTTCAAACCCAATGAAAGAAGAGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp ACCAAGAATAAATGTTTAAGTATGCAAGAGTTAGAGAATGGCAGCCACAGGGCACCAGGTGAGACTTTTTaGTCCCTAATAGAGCACTTC +
Preference number: 4 (lower is better)
Translates to: TKNKCLSMQELENGSHRAPGETF*SLIEHF
Trigger: GAAGTGCTCTATTAGGGATCAAAAAGTCTCACCTGG...TGCCCTGTGGCTGCCATTCTCTAACTCTTGCATACTTAAACATTTATTCTTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCTTCTCTATCAAGGGGTaGTTCTGGTATTTCCATTTA +
Preference number: 4 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLFSIKG*FWYFHL
Trigger: TAAATGGAAATACCAGAATCACCCCTTGATAGAGAA...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp CTTTCTAACATCATTAAATCACTGGGGTATCTCATCATAATTATCACCATGCAGCCATCTCGGCCCTCCTaGGACTTGCAAGATCTAACT +
Preference number: 4 (lower is better)
Translates to: LSNIIKSLGYLIIIITMQPSRPS*DLQDLT
Trigger: AGTTAGATCTTGCAAGTCTCAGGAGGGCCGAGATGG...CTGCATGGTGATAATTATGATGAGATACCCCAGTGATTTAATGATGTTAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCTCACAATCAGTCCAGTaGAGCAATATTATGCTAAGA +
Preference number: 4 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLSQSVQ*SNIMLR
Trigger: TCTTAGCATAATATTGCTTCACTGGACTGATTGTGA...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCATATTAGTTTCTGCTTaGATCCCACTAATGTCTAGC +
Preference number: 4 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLILVSA*IPLMSS
Trigger: GCTAGACATTAGTGGGATGCAAGCAGAAACTAATAT...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333209.4
CDS-3UTR GCA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTCTTGGTTTCTCAGGTTaGTCTCTATTTGAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: STQITSHVFVKASSFIGFLGFSG*SLFEVL
Trigger: GAGAACCTCAAATAGAGAGCAACCTGAGAAACCAAG...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTCAAATGACACGCAGCTaGTCTTGTTCAAAATGCTCA +
Preference number: 4 (lower is better)
Translates to: STQITSHVFVKASSFIGFQMTRS*SCSKCS
Trigger: TGAGCATTTTGAACAAGAGCAGCTGCGTGTCATTTG...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTGTCACATTTAACTTTTaGTCCTTGAGGAACTCGCTG +
Preference number: 4 (lower is better)
Translates to: STQITSHVFVKASSFIGFVTFNF*SLRNSL
Trigger: CAGCGAGTTCCTCAAGGAGCAAAAGTTAAATGTGAC...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp TTTTGTGACAATCTCTTGAGTGTTGTAGAAGTGAAGAATTTGGTCCCAGCACCATGGAAAACACTGTGCTaGCTTCCTCTGAGCTTCTTA +
Preference number: 4 (lower is better)
Translates to: FCDNLLSVVEVKNLVPAPWKTLC*LPLSFL
Trigger: TAAGAAGCTCAGAGGAAGGCAGCACAGTGTTTTCCA...TGGTGCTGGGACCAAATTCTTCACTTCTACAACACTCAAGAGATTGTCACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp AGGCCTCTTCTTTCATTGGGTTTGAAGGATATTATGGGTATTTCTCTTAAAATCGCTCATCCAGGCCAGTaGCTTGGAGGATACTCATGT +
Preference number: 4 (lower is better)
Translates to: RPLLSLGLKDIMGISLKIAHPGQ*LGGYSC
Trigger: ACATGAGTATCCTCCAAGGCACTGGCCTGGATGAGC...GATTTTAAGAGAAATACCCATAATATCCTTCAAACCCAATGAAAGAAGAGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTAGGTCAAGGCTCTTTTaGAGTTTGATTGAGAGACGT +
Preference number: 4 (lower is better)
Translates to: STQITSHVFVKASSFIGFRSRLF*SLIERR
Trigger: ACGTCTCTCAATCAAACTGCAAAAGAGCCTTGACCT...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCTTTCATAGAAGGAGTTaGCAAACTGTTCATGCATCT +
Preference number: 4 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLFHRRS*QTVHAS
Trigger: AGATGCATGAACAGTTTGCCAACTCCTTCTATGAAA...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333209.4
CDS-3UTR CCA 90 bp TTTTGTGACAATCTCTTGAGTGTTGTAGAAGTGAAGAATTTGGTCCCAGCACCACACCTGAAAAGCCATTaGCATTCTTACACAGGAGAG +
Preference number: 4 (lower is better)
Translates to: FCDNLLSVVEVKNLVPAPHLKSH*HSYTGE
Trigger: CTCTCCTGTGTAAGAATGCCAATGGCTTTTCAGGTG...TGGTGCTGGGACCAAATTCTTCACTTCTACAACACTCAAGAGATTGTCACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp TTTTGTGACAATCTCTTGAGTGTTGTAGAAGTGAAGAATTTGGTCCCAGCACCAACATATCTGGTTGGGTaGTCTCATGCTCACAAACCT +
Preference number: 4 (lower is better)
Translates to: FCDNLLSVVEVKNLVPAPTYLVG*SHAHKP
Trigger: AGGTTTGTGAGCATGAGACCACCCAACCAGATATGT...TGGTGCTGGGACCAAATTCTTCACTTCTACAACACTCAAGAGATTGTCACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp TTTTGTGACAATCTCTTGAGTGTTGTAGAAGTGAAGAATTTGGTCCCAGCACCAGAAGACATATCTGGTTaGGTGGTCTCATGCTCACAA +
Preference number: 4 (lower is better)
Translates to: FCDNLLSVVEVKNLVPAPEDISG*VVSCSQ
Trigger: TTGTGAGCATGAGACCACCCAACCAGATATGTCTTC...TGGTGCTGGGACCAAATTCTTCACTTCTACAACACTCAAGAGATTGTCACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GCATCGTTTTCTGTAAGGCATCATTTGAAGCCTCTTTGGATACAAGATCTCATGCACTTTCAGCTTGGTTaGTCATCGTACTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: ASFSVRHHLKPLWIQDLMHFQLG*SSYWLL
Trigger: AAGAAGCCAGTACGATGACCAACCAAGCTGAAAGTG...CATGAGATCTTGTATCCAAAGAGGCTTCAAATGATGCCTTACAGAAAACGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGTCTGGGTCTGTTTTGTaGCCGTTTGTCGTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: SRVRKYEYVWSESQRCALSGSVL*PFVVFS
Trigger: AGAGAAAACGACAAACGGCCACAAAACAGACCCAGA...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGGTGCCTCCACTTTCTTaGGATTTAGGATTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: SRVRKYEYVWSESQRCALVPPLS*DLGLSS
Trigger: ACTGCTCAATCCTAAATCCCAAGAAAGTGGAGGCAC...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTATTTGTCTTTGCAAATaGTTCTGGATCGCGATTCCC +
Preference number: 4 (lower is better)
Translates to: STQITSHVFVKASSFIGFICLCK*FWIAIP
Trigger: GGGAATCGCGATCCAGAACCATTTGCAAAGACAAAT...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp TTTTGTGACAATCTCTTGAGTGTTGTAGAAGTGAAGAATTTGGTCCCAGCACCAAAGTATCTGAGGAAATaGATCTCCGGGTCTGGCTAT +
Preference number: 4 (lower is better)
Translates to: FCDNLLSVVEVKNLVPAPKYLRK*ISGSGY
Trigger: ATAGCCAGACCCGGAGATCCATTTCCTCAGATACTT...TGGTGCTGGGACCAAATTCTTCACTTCTACAACACTCAAGAGATTGTCACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCGAACACAACTACAAATaGGTATTTAAGGCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLEHNYK*VFKAQR
Trigger: TCTTTGGGCCTTAAATACCCATTTGTAGTTGTGTTC...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp ACCAAGAATAAATGTTTAAGTATGCAAGAGTTAGAGAATGGCAGCCACAGGGCAAGCTGTAATGACCTCTaGCAGATGTCACTGATCACT +
Preference number: 4 (lower is better)
Translates to: TKNKCLSMQELENGSHRASCNDL*QMSLIT
Trigger: AGTGATCAGTGACATCTGCCAGAGGTCATTACAGCT...TGCCCTGTGGCTGCCATTCTCTAACTCTTGCATACTTAAACATTTATTCTTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGCTTGTTGCACCATTCTaGCCACCACAAGTCATTTCA +
Preference number: 4 (lower is better)
Translates to: SRVRKYEYVWSESQRCALLVAPF*PPQVIS
Trigger: TGAAATGACTTGTGGTGGCCAGAATGGTGCAACAAG...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGACAAACACCCACTGGTaGGACATAAACAGCTATAGG +
Preference number: 4 (lower is better)
Translates to: SRVRKYEYVWSESQRCALTNTHW*DINSYR
Trigger: CCTATAGCTGTTTATGTCCCACCAGTGGGTGTTTGT...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR CAA 72 bp GTAAAACTGTGCATGTATACATTATACCTCCTAAGGTaGAGACATAGATGGAAGTGCCCAGCAAAACGTCTG +
Preference number: 4 (lower is better)
Translates to: VKLCMYTLYLLR*RHRWKCPAKRL
Trigger: CAGACGTTTTGCTGGGCACTTCCATCTATGTCTCAACCTTAGGAGGTATAATGTATACATGCACAGTTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp CTTTCTAACATCATTAAATCACTGGGGTATCTCATCATAATTATCACCATGCAGCCAGAACAGATACTGTaGATTGACTGTACCCACGGG +
Preference number: 4 (lower is better)
Translates to: LSNIIKSLGYLIIIITMQPEQIL*IDCTHG
Trigger: CCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGG...CTGCATGGTGATAATTATGATGAGATACCCCAGTGATTTAATGATGTTAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGCATCTGAGACAGAAGTaGCACGAACACAACTACAAA +
Preference number: 4 (lower is better)
Translates to: SRVRKYEYVWSESQRCALHLRQK*HEHNYK
Trigger: TTTGTAGTTGTGTTCGTGTCACTTCTGTCTCAGATG...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp ACCAAGAATAAATGTTTAAGTATGCAAGAGTTAGAGAATGGCAGCCACAGGGCATATGCAAGATACTGCTaGGTTCACTGTTCTACCACA +
Preference number: 4 (lower is better)
Translates to: TKNKCLSMQELENGSHRAYARYC*VHCSTT
Trigger: TGTGGTAGAACAGTGAACTCAGCAGTATCTTGCATA...TGCCCTGTGGCTGCCATTCTCTAACTCTTGCATACTTAAACATTTATTCTTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGATGCCAACTGTATCCTaGCTAATGCTCATTAGTGCT +
Preference number: 4 (lower is better)
Translates to: SRVRKYEYVWSESQRCALMPTVS*LMLISA
Trigger: AGCACTAATGAGCATTAGTCAGGATACAGTTGGCAT...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp TTTTGTGACAATCTCTTGAGTGTTGTAGAAGTGAAGAATTTGGTCCCAGCACCATTCTTTTCCGGAAGCTaGAATCAGGGAAGTTTTAGC +
Preference number: 4 (lower is better)
Translates to: FCDNLLSVVEVKNLVPAPFFSGS*NQGSFS
Trigger: GCTAAAACTTCCCTGATTGCAGCTTCCGGAAAAGAA...TGGTGCTGGGACCAAATTCTTCACTTCTACAACACTCAAGAGATTGTCACAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp ACCAAGAATAAATGTTTAAGTATGCAAGAGTTAGAGAATGGCAGCCACAGGGCACAAATAACATCTTGTTaGACCATTCTGGCCACCACA +
Preference number: 4 (lower is better)
Translates to: TKNKCLSMQELENGSHRAQITSC*TILATT
Trigger: TGTGGTGGCCAGAATGGTGCAACAAGATGTTATTTG...TGCCCTGTGGCTGCCATTCTCTAACTCTTGCATACTTAAACATTTATTCTTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp TTTTGTGACAATCTCTTGAGTGTTGTAGAAGTGAAGAATTTGGTCCCAGCACCATCTAGGAATCCAGACTaGAGGATCCCAGTTTATCTT +
Preference number: 4 (lower is better)
Translates to: FCDNLLSVVEVKNLVPAPSRNPD*RIPVYL
Trigger: AAGATAAACTGGGATCCTGCAGTCTGGATTCCTAGA...TGGTGCTGGGACCAAATTCTTCACTTCTACAACACTCAAGAGATTGTCACAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGATACCATTCTTGAGATaGCAGTACTCCCACCAGAAA +
Preference number: 4 (lower is better)
Translates to: SRVRKYEYVWSESQRCALIPFLR*QYSHQK
Trigger: TTTCTGGTGGGAGTACTGGCATCTCAAGAATGGTAT...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGTCTTTACACGTATGCTaGGCATTACTGGAGACCAAA +
Preference number: 4 (lower is better)
Translates to: SRVRKYEYVWSESQRCALSLHVC*ALLETK
Trigger: TTTGGTCTCCAGTAATGCCCAGCATACGTGTAAAGA...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp TTTTGTGACAATCTCTTGAGTGTTGTAGAAGTGAAGAATTTGGTCCCAGCACCACAAACTCAGATGGCCTaGTTTCAAATTTCCCCAATC +
Preference number: 4 (lower is better)
Translates to: FCDNLLSVVEVKNLVPAPQTQMA*FQISPI
Trigger: GATTGGGGAAATTTGAAACCAGGCCATCTGAGTTTG...TGGTGCTGGGACCAAATTCTTCACTTCTACAACACTCAAGAGATTGTCACAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp CTTTCTAACATCATTAAATCACTGGGGTATCTCATCATAATTATCACCATGCAGCTTTGCAAATGGTTCTaGATCGCGATTCCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LSNIIKSLGYLIIIITMQLCKWF*IAIPRD
Trigger: GTCCCTGGGAATCGCGATCCAGAACCATTTGCAAAG...CTGCATGGTGATAATTATGATGAGATACCCCAGTGATTTAATGATGTTAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp ACCAAGAATAAATGTTTAAGTATGCAAGAGTTAGAGAATGGCAGCCACAGGGCACAGCTGACCCGAATTTaGAGAGAATCAACCAAAAAG +
Preference number: 4 (lower is better)
Translates to: TKNKCLSMQELENGSHRAQLTRI*RESTKK
Trigger: CTTTTTGGTTGATTCTCTCCAAATTCGGGTCAGCTG...TGCCCTGTGGCTGCCATTCTCTAACTCTTGCATACTTAAACATTTATTCTTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp AGGCCTCTTCTTTCATTGGGTTTGAAGGATATTATGGGTATTTCTCTTAAAATCCTGTTATTTGCCAGGTaGCAGCAGCTGACCCGAATT +
Preference number: 4 (lower is better)
Translates to: RPLLSLGLKDIMGISLKILLFAR*QQLTRI
Trigger: AATTCGGGTCAGCTGCTGCCACCTGGCAAATAACAG...GATTTTAAGAGAAATACCCATAATATCCTTCAAACCCAATGAAAGAAGAGGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp CTTTCTAACATCATTAAATCACTGGGGTATCTCATCATAATTATCACCATGCAGCTGGTCAAGTCAAACTaGGGATATGGCTGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: LSNIIKSLGYLIIIITMQLVKSN*GYGWAF
Trigger: GAAAGCCCAGCCATATCCCCAGTTTGACTTGACCAG...CTGCATGGTGATAATTATGATGAGATACCCCAGTGATTTAATGATGTTAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTTGTCAATTAGCTCAGTaGTTGTGTAGAATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: STQITSHVFVKASSFIGFCQLAQ*LCRMVL
Trigger: CAACACCATTCTACACAACCACTGAGCTAATTGACA...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTCGGGTCTGGCTATTTTaGGTTTTGATTAATTTCTCA +
Preference number: 4 (lower is better)
Translates to: STQITSHVFVKASSFIGFRVWLF*VLINFS
Trigger: TGAGAAATTAATCAAAACTCAAAATAGCCAGACCCG...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGACAACTCTCAGGCTCTaGGAATACTGTTCCATATAT +
Preference number: 4 (lower is better)
Translates to: SRVRKYEYVWSESQRCALTTLRL*EYCSIY
Trigger: ATATATGGAACAGTATTCTCAGAGCCTGAGAGTTGT...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp TTTTGTGACAATCTCTTGAGTGTTGTAGAAGTGAAGAATTTGGTCCCAGCACCAACAACTCTCAGGCTCTaGGAATACTGTTCCATATAT +
Preference number: 4 (lower is better)
Translates to: FCDNLLSVVEVKNLVPAPTTLRL*EYCSIY
Trigger: ATATATGGAACAGTATTCTCAGAGCCTGAGAGTTGT...TGGTGCTGGGACCAAATTCTTCACTTCTACAACACTCAAGAGATTGTCACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp ACCAAGAATAAATGTTTAAGTATGCAAGAGTTAGAGAATGGCAGCCACAGGGCATTCAGACAGGGTGGTTaGCCAAAAGTGATCTTATAT +
Preference number: 4 (lower is better)
Translates to: TKNKCLSMQELENGSHRAFRQGG*PKVILY
Trigger: ATATAAGATCACTTTTGGTCAACCACCCTGTCTGAA...TGCCCTGTGGCTGCCATTCTCTAACTCTTGCATACTTAAACATTTATTCTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp AGGCCTCTTCTTTCATTGGGTTTGAAGGATATTATGGGTATTTCTCTTAAAATCTACTACCTGAGGAGATaGAGGCTTCTTTTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: RPLLSLGLKDIMGISLKIYYLRR*RLLFPC
Trigger: GCAAGGGAAAAGAAGCCTGCATCTCCTCAGGTAGTA...GATTTTAAGAGAAATACCCATAATATCCTTCAAACCCAATGAAAGAAGAGGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp AGGCCTCTTCTTTCATTGGGTTTGAAGGATATTATGGGTATTTCTCTTAAAATCAGGCACACACCACCATaGCCGGCTAGTTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: RPLLSLGLKDIMGISLKIRHTPP*PASFCI
Trigger: AATACAAAAACTAGCCGGGCATGGTGGTGTGTGCCT...GATTTTAAGAGAAATACCCATAATATCCTTCAAACCCAATGAAAGAAGAGGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp AGGCCTCTTCTTTCATTGGGTTTGAAGGATATTATGGGTATTTCTCTTAAAATCCCCACCAGAAATCTCTaGAAGCACTTTCAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: RPLLSLGLKDIMGISLKIPTRNL*KHFQLP
Trigger: TGGAAGCTGAAAGTGCTTGCAGAGATTTCTGGTGGG...GATTTTAAGAGAAATACCCATAATATCCTTCAAACCCAATGAAAGAAGAGGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp AGGCCTCTTCTTTCATTGGGTTTGAAGGATATTATGGGTATTTCTCTTAAAATCCAGGTACAGTCCCCATaGAATTTCTCTTCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: RPLLSLGLKDIMGISLKIQVQSP*NFSSGA
Trigger: TGCTCCTGAAGAGAAATTCCATGGGGACTGTACCTG...GATTTTAAGAGAAATACCCATAATATCCTTCAAACCCAATGAAAGAAGAGGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp CTTTCTAACATCATTAAATCACTGGGGTATCTCATCATAATTATCACCATGCAGTCTAAGGTGCTCTCCTaGTTCTTCCTAATTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LSNIIKSLGYLIIIITMQSKVLS*FFLIGE
Trigger: CTCCCCAATTAGGAAGAACCAGGAGAGCACCTTAGA...CTGCATGGTGATAATTATGATGAGATACCCCAGTGATTTAATGATGTTAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp CTTTCTAACATCATTAAATCACTGGGGTATCTCATCATAATTATCACCATGCAGGATGGTGTTAGAAAGTaGGGGCTTTGGGTGGTGATT +
Preference number: 4 (lower is better)
Translates to: LSNIIKSLGYLIIIITMQDGVRK*GLWVVI
Trigger: AATCACCACCCAAAGCCCCCACTTTCTAACACCATC...CTGCATGGTGATAATTATGATGAGATACCCCAGTGATTTAATGATGTTAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGGTTATTGGTGTAATCTaGCTTAGCAGATGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: SRVRKYEYVWSESQRCALVIGVI*LSRCQK
Trigger: TTTCTGACATCTGCTAAGTCAGATTACACCAATAAC...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333209.4
CDS-3UTR TCA 90 bp TTTTGTGACAATCTCTTGAGTGTTGTAGAAGTGAAGAATTTGGTCCCAGCACCATGCTATGTCACAGATTaGAGTGAAGGAAAATTCTCA +
Preference number: 4 (lower is better)
Translates to: FCDNLLSVVEVKNLVPAPCYVTD*SEGKFS
Trigger: TGAGAATTTTCCTTCACTTCAATCTGTGACATAGCA...TGGTGCTGGGACCAAATTCTTCACTTCTACAACACTCAAGAGATTGTCACAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR TCA 90 bp GCATCGTTTTCTGTAAGGCATCATTTGAAGCCTCTTTGGATACAAGATCTCATGGCTTCATCTGTTGAATaGACCTTAGGTTTCACAAAT +
Preference number: 4 (lower is better)
Translates to: ASFSVRHHLKPLWIQDLMASSVE*TLGFTN
Trigger: ATTTGTGAAACCTAAGGTTCATTCAACAGATGAAGC...CATGAGATCTTGTATCCAAAGAGGCTTCAAATGATGCCTTACAGAAAACGATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGAATTGCTCAGCCAGTTaGAGAATTTCATTAAGAAGG +
Preference number: 4 (lower is better)
Translates to: SRVRKYEYVWSESQRCALNCSAS*RISLRR
Trigger: CCTTCTTAATGAAATTCTTCAACTGGCTGAGCAATT...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGACACAAGGCTACAAGTaGCCAGTTTTCAATAAAAAC +
Preference number: 4 (lower is better)
Translates to: SRVRKYEYVWSESQRCALTQGYK*PVFNKN
Trigger: GTTTTTATTGAAAACTGGGCACTTGTAGCCTTGTGT...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp ACCAAGAATAAATGTTTAAGTATGCAAGAGTTAGAGAATGGCAGCCACAGGGCATATGTCCTTGGTCATTaGAAACCCAGCTTATTTGAT +
Preference number: 4 (lower is better)
Translates to: TKNKCLSMQELENGSHRAYVLGH*KPSLFD
Trigger: ATCAAATAAGCTGGGTTTGCAATGACCAAGGACATA...TGCCCTGTGGCTGCCATTCTCTAACTCTTGCATACTTAAACATTTATTCTTGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp ACCAAGAATAAATGTTTAAGTATGCAAGAGTTAGAGAATGGCAGCCACAGGGCACAGAAACTATGCCTTTaGTTATTTTATCCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: TKNKCLSMQELENGSHRAQKLCL*LFYPVG
Trigger: ACCCACAGGATAAAATAAGCAAAGGCATAGTTTCTG...TGCCCTGTGGCTGCCATTCTCTAACTCTTGCATACTTAAACATTTATTCTTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp AGGCCTCTTCTTTCATTGGGTTTGAAGGATATTATGGGTATTTCTCTTAAAATCACATATCTGGTTGGGTaGTCTCATGCTCACAAACCT +
Preference number: 4 (lower is better)
Translates to: RPLLSLGLKDIMGISLKITYLVG*SHAHKP
Trigger: AGGTTTGTGAGCATGAGACCACCCAACCAGATATGT...GATTTTAAGAGAAATACCCATAATATCCTTCAAACCCAATGAAAGAAGAGGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTAAATATGAATATGTCTaGTCAGAATCACAGAGATGC +
Preference number: 4 (lower is better)
Translates to: STQITSHVFVKASSFIGFKYEYV*SESQRC
Trigger: GCATCTCTGTGATTCTGACCAGACATATTCATATTT...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGATATCGTTACAAGGATaGACAGGAGATTCAGCATAT +
Preference number: 4 (lower is better)
Translates to: SRVRKYEYVWSESQRCALISLQG*TGDSAY
Trigger: ATATGCTGAATCTCCTGTCCATCCTTGTAACGATAT...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGCCTGAATACAGAAATTaGCCTTTAAATGGGATACGA +
Preference number: 4 (lower is better)
Translates to: SRVRKYEYVWSESQRCALPEYRN*PLNGIR
Trigger: TCGTATCCCATTTAAAGGCCAATTTCTGTATTCAGG...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR CAA 72 bp AGATGCACTGGATTTATTTTGAGAGAGGTTATTTTGTaGTGGCAAGTGAGTAGTTTAGCTGGTGACTGTTCA +
Preference number: 4 (lower is better)
Translates to: RCTGFILREVIL*WQVSSLAGDCS
Trigger: TGAACAGTCACCAGCTAAACTACTCACTTGCCACAACAAAATAACCTCTCTCAAAATAAATCCAGTGCATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp AGGCCTCTTCTTTCATTGGGTTTGAAGGATATTATGGGTATTTCTCTTAAAATCTTCAACTTTTGCCAGTaGCCCAAAGCACAAAGGTTA +
Preference number: 4 (lower is better)
Translates to: RPLLSLGLKDIMGISLKIFNFCQ*PKAQRL
Trigger: TAACCTTTGTGCTTTGGGTCACTGGCAAAAGTTGAA...GATTTTAAGAGAAATACCCATAATATCCTTCAAACCCAATGAAAGAAGAGGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp AGGCCTCTTCTTTCATTGGGTTTGAAGGATATTATGGGTATTTCTCTTAAAATCAGGCTTCTTTTCCCTTaGATCTCCTTTATTAGTGGG +
Preference number: 4 (lower is better)
Translates to: RPLLSLGLKDIMGISLKIRLLFP*ISFISG
Trigger: CCCACTAATAAAGGAGATGCAAGGGAAAAGAAGCCT...GATTTTAAGAGAAATACCCATAATATCCTTCAAACCCAATGAAAGAAGAGGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR GCA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGAGCTTATTTGATTTCTaGAGCCAAGGAGAATTGTTT +
Preference number: 4 (lower is better)
Translates to: SRVRKYEYVWSESQRCALSLFDF*SQGELF
Trigger: AAACAATTCTCCTTGGCTGCAGAAATCAAATAAGCT...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp CTTTCTAACATCATTAAATCACTGGGGTATCTCATCATAATTATCACCATGCAGATTTGTCTTTGCAAATaGTTCTGGATCGCGATTCCC +
Preference number: 4 (lower is better)
Translates to: LSNIIKSLGYLIIIITMQICLCK*FWIAIP
Trigger: GGGAATCGCGATCCAGAACCATTTGCAAAGACAAAT...CTGCATGGTGATAATTATGATGAGATACCCCAGTGATTTAATGATGTTAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGAAATATGAATATGTCTaGTCAGAATCACAGAGATGC +
Preference number: 4 (lower is better)
Translates to: SRVRKYEYVWSESQRCALKYEYV*SESQRC
Trigger: GCATCTCTGTGATTCTGACCAGACATATTCATATTT...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGGACTACATTTGTTACTaGAAGTTACTGAACCCAATT +
Preference number: 4 (lower is better)
Translates to: SRVRKYEYVWSESQRCALDYICY*KLLNPI
Trigger: AATTGGGTTCAGTAACTTCCAGTAACAAATGTAGTC...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CCA 90 bp GCATCGTTTTCTGTAAGGCATCATTTGAAGCCTCTTTGGATACAAGATCTCATGAAAGTAGTTGGTCTGTaGCATTCAAAGTCAATAATC +
Preference number: 4 (lower is better)
Translates to: ASFSVRHHLKPLWIQDLMKVVGL*HSKSII
Trigger: GATTATTGACTTTGAATGCCACAGACCAACTACTTT...CATGAGATCTTGTATCCAAAGAGGCTTCAAATGATGCCTTACAGAAAACGATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp GCATCGTTTTCTGTAAGGCATCATTTGAAGCCTCTTTGGATACAAGATCTCATGTGTGCACACTTTTGTTaGCTTTATTCATGTATGTAC +
Preference number: 4 (lower is better)
Translates to: ASFSVRHHLKPLWIQDLMCAHFC*LYSCMY
Trigger: GTACATACATGAATAAAGCCAACAAAAGTGTGCACA...CATGAGATCTTGTATCCAAAGAGGCTTCAAATGATGCCTTACAGAAAACGATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp AGGCCTCTTCTTTCATTGGGTTTGAAGGATATTATGGGTATTTCTCTTAAAATCATGTCACTGATCACTTaGGAGACAGAATTTTTCCAC +
Preference number: 4 (lower is better)
Translates to: RPLLSLGLKDIMGISLKIMSLIT*ETEFFH
Trigger: GTGGAAAAATTCTGTCTCCCAAGTGATCAGTGACAT...GATTTTAAGAGAAATACCCATAATATCCTTCAAACCCAATGAAAGAAGAGGCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp AGGCCTCTTCTTTCATTGGGTTTGAAGGATATTATGGGTATTTCTCTTAAAATCACGTCGCTTAAGGATTaGAAAATAAACCAAACTGTC +
Preference number: 4 (lower is better)
Translates to: RPLLSLGLKDIMGISLKITSLKD*KINQTV
Trigger: GACAGTTTGGTTTATTTTTCAATCCTTAAGCGACGT...GATTTTAAGAGAAATACCCATAATATCCTTCAAACCCAATGAAAGAAGAGGCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333209.4
CDS-3UTR TCA 90 bp CTTTCTAACATCATTAAATCACTGGGGTATCTCATCATAATTATCACCATGCAGTGCTATGTCACAGATTaGAGTGAAGGAAAATTCTCA +
Preference number: 4 (lower is better)
Translates to: LSNIIKSLGYLIIIITMQCYVTD*SEGKFS
Trigger: TGAGAATTTTCCTTCACTTCAATCTGTGACATAGCA...CTGCATGGTGATAATTATGATGAGATACCCCAGTGATTTAATGATGTTAGAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR TCA 90 bp CTTTCTAACATCATTAAATCACTGGGGTATCTCATCATAATTATCACCATGCAGTATCACCATGCAGGTTaGTCATCAATATCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: LSNIIKSLGYLIIIITMQYHHAG*SSISFS
Trigger: AGAAAAGGATATTGATGATCAACCTGCATGGTGATA...CTGCATGGTGATAATTATGATGAGATACCCCAGTGATTTAATGATGTTAGAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp AGGCCTCTTCTTTCATTGGGTTTGAAGGATATTATGGGTATTTCTCTTAAAATCGCTTATTTTATCCTGTaGGTTACAGTCAGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: RPLLSLGLKDIMGISLKIAYFIL*VTVSLH
Trigger: ATGAAGACTGACTGTAACCCACAGGATAAAATAAGC...GATTTTAAGAGAAATACCCATAATATCCTTCAAACCCAATGAAAGAAGAGGCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp CTTTCTAACATCATTAAATCACTGGGGTATCTCATCATAATTATCACCATGCAGTTGTACTTTGCCAAATaGAATTCTCTATCAAGGGGT +
Preference number: 4 (lower is better)
Translates to: LSNIIKSLGYLIIIITMQLYFAK*NSLSRG
Trigger: ACCCCTTGATAGAGAATTCCATTTGGCAAAGTACAA...CTGCATGGTGATAATTATGATGAGATACCCCAGTGATTTAATGATGTTAGAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CCA 90 bp CTTTCTAACATCATTAAATCACTGGGGTATCTCATCATAATTATCACCATGCAGCTTTCTACTGAGAAGTaGTTGTTTGTACTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: LSNIIKSLGYLIIIITMQLSTEK*LFVLCQ
Trigger: TTGGCAAAGTACAAACAACCACTTCTCAGTAGAAAG...CTGCATGGTGATAATTATGATGAGATACCCCAGTGATTTAATGATGTTAGAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR CAA 72 bp ACACCTGCACAGTATCAATTTAGTATTATCCCTAATTaGATGGCTCTTTTCAAGAATTCAGTCCCATGTACT +
Preference number: 4 (lower is better)
Translates to: TPAQYQFSIIPN*MALFKNSVPCT
Trigger: AGTACATGGGACTGAATTCTTGAAAAGAGCCATCAAATTAGGGATAATACTAAATTGATACTGTGCAGGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
3UTR CAA 72 bp TTCTGGTTAACATTGACTTATCAGGATGTTCAACTTTaGCCAGTGACCCAAAGCACAAAGGTTAATCAATAT +
Preference number: 4 (lower is better)
Translates to: FWLTLTYQDVQL*PVTQSTKVNQY
Trigger: ATATTGATTAACCTTTGTGCTTTGGGTCACTGGCAAAAGTTGAACATCCTGATAAGTCAATGTTAACCAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR CAA 72 bp CTATCTACACATATATACAGATGCACTGGATTTATTTaGAGAGAGGTTATTTTGTTGTGGCAAGTGAGTAGT +
Preference number: 4 (lower is better)
Translates to: LSTHIYRCTGFI*REVILLWQVSS
Trigger: ACTACTCACTTGCCACAACAAAATAACCTCTCTCAAAATAAATCCAGTGCATCTGTATATATGTGTAGATAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
3UTR CAA 72 bp AATGTTATTCTTAACTTTCTACTGAGAAGTGGTTGTTaGTACTTTGCCAAATGGAATTCTCTATCAAGGGGT +
Preference number: 4 (lower is better)
Translates to: NVILNFLLRSGC*YFAKWNSLSRG
Trigger: ACCCCTTGATAGAGAATTCCATTTGGCAAAGTACAAACAACCACTTCTCAGTAGAAAGTTAAGAATAACATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp CTTTCTAACATCATTAAATCACTGGGGTATCTCATCATAATTATCACCATGCAGCATAATAGATGCATTTaGTGGTATAACTGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: LSNIIKSLGYLIIIITMQHNRCI*WYNCLF
Trigger: AAAGAGGCAGTTATACCAGCAAATGCATCTATTATG...CTGCATGGTGATAATTATGATGAGATACCCCAGTGATTTAATGATGTTAGAAAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR GCA 90 bp AGGCCTCTTCTTTCATTGGGTTTGAAGGATATTATGGGTATTTCTCTTAAAATCCTTCTTTCCTGCAACTaGTTTGAGGATTTAGATAAT +
Preference number: 4 (lower is better)
Translates to: RPLLSLGLKDIMGISLKILLSCN*FEDLDN
Trigger: ATTATCTAAATCCTCAAAGCAGTTGCAGGAAAGAAG...GATTTTAAGAGAAATACCCATAATATCCTTCAAACCCAATGAAAGAAGAGGCCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS CCA 90 bp TGCTCTGCCCGGCTCCGCGGCGCGGCGGGGCCACTGCCTGCGCTGTaGCGGGGGCTTCCCGTCGCATATCCCAAGCACCGTCTCTCGGCG +
Preference number: 5 (lower is better)
Translates to: CSARLRGAAGPLPAL*RGLPVAYPKHRLSA
Trigger: CGCCGAGAGACGGTGCTTGGGATATGCGACGGGAAGCCCCCGCCACAGCGCAGGCAGTGGCCCCGCCGCGCCGCGGAGCCGGGCAGAGCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS TCA 90 bp ACCGTCTCTCGGCGCCACACCGATGGCTCCGGCGGGCCCGCGAGCTaGGGTCCTTCTCAGCCCGGTCCCGGAGCGAGCTCCGTGCGTTCA +
Preference number: 5 (lower is better)
Translates to: TVSRRHTDGSGGPAS*GPSQPGPGASSVRS
Trigger: TGAACGCACGGAGCTCGCTCCGGGACCGGGCTGAGAAGGACCTCAGCTCGCGGGCCCGCCGGAGCCATCGGTGTGGCGCCGAGAGACGGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS CCA 90 bp CTTCCCGTCGCATATCCCAAGCACCGTCTCTCGGCGCCACACCGATaGCTCCGGCGGGCCCGCGAGCTGAGGTCCTTCTCAGCCCGGTCC +
Preference number: 5 (lower is better)
Translates to: LPVAYPKHRLSAPHR*LRRARELRSFSARS
Trigger: GGACCGGGCTGAGAAGGACCTCAGCTCGCGGGCCCGCCGGAGCCATCGGTGTGGCGCCGAGAGACGGTGCTTGGGATATGCGACGGGAAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS CCA 90 bp GCTGACGCGGCTGGGCCTGCGTGGGCTGGCTTTGACGGAGCGAGATaGGGTCTTCTTGCCAGAACCTGGGCTGGAGTCACCCATGGGATC +
Preference number: 5 (lower is better)
Translates to: ADAAGPAWAGFDGAR*GLLARTWAGVTHGI
Trigger: GATCCCATGGGTGACTCCAGCCCAGGTTCTGGCAAGAAGACCCCATCTCGCTCCGTCAAAGCCAGCCCACGCAGGCCCAGCCGCGTCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp TGTCTCGGGACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGAGGTGTCACAGAAGTaGTGCCTTGGGGGCCCGAGG +
Preference number: 5 (lower is better)
Translates to: CLGTHVSSGDTGGPRSQEEVSQK*CLGGPR
Trigger: CCTCGGGCCCCCAAGGCACAACTTCTGTGACACCTC...TTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACGGACGGACGCAGCAGTaGGGGCGTCGGAAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYGRTQQ*GRRKFC
Trigger: GCAGAACTTCCGACGCCCCAACTGCTGCGTCCGTCC...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS GCA 90 bp CTGGGGCTGGTGGAGACGGATCTGCTCTCGACACTCGCCACTGCCTaGACCTCCGCATCTTGCCAAGCCCTGCTGGGAACTTCCTTGATT +
Preference number: 5 (lower is better)
Translates to: LGLVETDLLSTLATA*TSASCQALLGTSLI
Trigger: AATCAAGGAAGTTCCCAGCAGGGCTTGGCAAGATGCGGAGGTGCAGGCAGTGGCGAGTGTCGAGAGCAGATCCGTCTCCACCAGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS GCA 90 bp GATACTGGGGCTGGTGGAGACGGATCTGCTCTCGACACTCGCCACTaGCTGCACCTCCGCATCTTGCCAAGCCCTGCTGGGAACTTCCTT +
Preference number: 5 (lower is better)
Translates to: DTGAGGDGSALDTRH*LHLRILPSPAGNFL
Trigger: AAGGAAGTTCCCAGCAGGGCTTGGCAAGATGCGGAGGTGCAGGCAGTGGCGAGTGTCGAGAGCAGATCCGTCTCCACCAGCCCCAGTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CCA 90 bp TGGGCTGGCTTTGACGGAGCGAGATGGGGTCTTCTTGCCAGAACCTaGGCTGGAGTCACCCATGGGATCAGATGGCAGGCTCAGGCTGGT +
Preference number: 5 (lower is better)
Translates to: WAGFDGARWGLLART*AGVTHGIRWQAQAG
Trigger: ACCAGCCTGAGCCTGCCATCTGATCCCATGGGTGACTCCAGCCCAGGTTCTGGCAAGAAGACCCCATCTCGCTCCGTCAAAGCCAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp TGTCTCGGGACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAACGAGATGGGGTCTTCTaGCCAGAACCTGGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: CLGTHVSSGDTGGPRSQERDGVF*PEPGLE
Trigger: CTCCAGCCCAGGTTCTGGCAAGAAGACCCCATCTCG...TTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS TCA 90 bp GCTCCCTGCCTTTCCCCTTCAGGTCCACCTACAGGAGAGGATGAGTaGCTGACCACCCTGGCTGCTGTCACTGGAGTCTGCACTGTTCCC +
Preference number: 5 (lower is better)
Translates to: APCLSPSGPPTGEDE*LTTLAAVTGVCTVP
Trigger: GGGAACAGTGCAGACTCCAGTGACAGCAGCCAGGGTGGTCAGTCACTCATCCTCTCCTGTAGGTGGACCTGAAGGGGAAAGGCAGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CCA 90 bp AGCGAGATGGGGTCTTCTTGCCAGAACCTGGGCTGGAGTCACCCATaGGATCAGATGGCAGGCTCAGGCTGGTGGCTGTCTTGGTCTGTC +
Preference number: 5 (lower is better)
Translates to: SEMGSSCQNLGWSHP*DQMAGSGWWLSWSV
Trigger: GACAGACCAAGACAGCCACCAGCCTGAGCCTGCCATCTGATCCCATGGGTGACTCCAGCCCAGGTTCTGGCAAGAAGACCCCATCTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGCACAGAAGTTGTGCCTaGGGGGCCCGAGGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGHRSCA*GARGSD
Trigger: GTCACTGCCTCGGGCCCCCAAGGCACAACTTCTGTG...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS TCA 90 bp GATGGCTCCCTGCCTTTCCCCTTCAGGTCCACCTACAGGAGAGGATaGGTGACTGACCACCCTGGCTGCTGTCACTGGAGTCTGCACTGT +
Preference number: 5 (lower is better)
Translates to: DGSLPFPFRSTYRRG*VTDHPGCCHWSLHC
Trigger: ACAGTGCAGACTCCAGTGACAGCAGCCAGGGTGGTCAGTCACTCATCCTCTCCTGTAGGTGGACCTGAAGGGGAAAGGCAGGGAGCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGCGAGATGGGGTCTTCTaGCCAGAACCTGGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGRDGVF*PEPGLE
Trigger: CTCCAGCCCAGGTTCTGGCAAGAAGACCCCATCTCG...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGACGGACGCAGCAGTaGGGGCGTCGGAAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHGRTQQ*GRRKFC
Trigger: GCAGAACTTCCGACGCCCCAACTGCTGCGTCCGTCC...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS GCA 90 bp CCAGGAGAAGACATATCTGGTTGGGTGGTCTCATGCTCACAAACCTaGATCAGGGCTTCGGCAGCTGCCCTGGGGCTGAGGTCTGGTTCT +
Preference number: 5 (lower is better)
Translates to: PGEDISGWVVSCSQT*IRASAAALGLRSGS
Trigger: AGAACCAGACCTCAGCCCCAGGGCAGCTGCCGAAGCCCTGATGCAGGTTTGTGAGCATGAGACCACCCAACCAGATATGTCTTCTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CCA 90 bp TCTTCAGGAGCACTCCAGAGCTCTCTTGAGTACTGGTCCCACTGGTaGGGGAGGGGAGCGCAGTCAGAGCTCAGAGTGATGACACAGTCA +
Preference number: 5 (lower is better)
Translates to: SSGALQSSLEYWSHW*GRGAQSELRVMTQS
Trigger: TGACTGTGTCATCACTCTGAGCTCTGACTGCGCTCCCCTCCCCCACCAGTGGGACCAGTACTCAAGAGAGCTCTGGAGTGCTCCTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACCTGCACCTCCGCATCTaGCCAAGCCCTGCTGGGAAC +
Preference number: 5 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHLHLRI*PSPAGN
Trigger: GTTCCCAGCAGGGCTTGGCAAGATGCGGAGGTGCAG...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS GCA 90 bp ACGGATCTGCTCTCGACACTCGCCACTGCCTGCACCTCCGCATCTTaGCAAGCCCTGCTGGGAACTTCCTTGATTTCACTTTCAGCTTGG +
Preference number: 5 (lower is better)
Translates to: TDLLSTLATACTSAS*QALLGTSLISLSAW
Trigger: CCAAGCTGAAAGTGAAATCAAGGAAGTTCCCAGCAGGGCTTGGCAAGATGCGGAGGTGCAGGCAGTGGCGAGTGTCGAGAGCAGATCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS GCA 90 bp GACTCTGCGTCCAAGGATGCACCATACACTTCCCAGGTCATTCCCTaGTCATCCCACACGACGTCCCTGACACGCTTGGACTGTTTCAGC +
Preference number: 5 (lower is better)
Translates to: DSASKDAPYTSQVIP*SSHTTSLTRLDCFS
Trigger: GCTGAAACAGTCCAAGCGTGTCAGGGACGTCGTGTGGGATGAGCAGGGAATGACCTGGGAAGTGTATGGTGCATCCTTGGACGCAGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CCA 90 bp CTGGGCTGGAGTCACCCATGGGATCAGATGGCAGGCTCAGGCTGGTaGCTGTCTTGGTCTGTCTGTTTTCTTCTAAGGTGCTCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: LGWSHPWDQMAGSGW*LSWSVCFLLRCSPG
Trigger: ACCAGGAGAGCACCTTAGAAGAAAACAGACAGACCAAGACAGCCACCAGCCTGAGCCTGCCATCTGATCCCATGGGTGACTCCAGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CCA 90 bp GGTCTTCTTGCCAGAACCTGGGCTGGAGTCACCCATGGGATCAGATaGCAGGCTCAGGCTGGTGGCTGTCTTGGTCTGTCTGTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: GLLARTWAGVTHGIR*QAQAGGCLGLSVFF
Trigger: GAAGAAAACAGACAGACCAAGACAGCCACCAGCCTGAGCCTGCCATCTGATCCCATGGGTGACTCCAGCCCAGGTTCTGGCAAGAAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGCACTCCAGAGCTCTCTaGAGTACTGGTCCCACTGGT +
Preference number: 5 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGHSRAL*STGPTG
Trigger: ACCAGTGGGACCAGTACTCAAGAGAGCTCTGGAGTG...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS GCA 90 bp CAAATGGTTCTGGATCGCGATTCCCAGGGACTCTGCGTCCAAGGATaGACCATACACTTCCCAGGTCATTCCCTGCTCATCCCACACGAC +
Preference number: 5 (lower is better)
Translates to: QMVLDRDSQGLCVQG*TIHFPGHSLLIPHD
Trigger: GTCGTGTGGGATGAGCAGGGAATGACCTGGGAAGTGTATGGTGCATCCTTGGACGCAGAGTCCCTGGGAATCGCGATCCAGAACCATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CCA 90 bp CCTTTCAATCTAACACAGAAGACGGGGCAGGACGGACGCAGCAGTTaGGGCGTCGGAAGTTCTGCAGCATGGACTGGAAAACACTGTGCT +
Preference number: 5 (lower is better)
Translates to: PFNLTQKTGQDGRSS*GVGSSAAWTGKHCA
Trigger: AGCACAGTGTTTTCCAGTCCATGCTGCAGAACTTCCGACGCCCCAACTGCTGCGTCCGTCCTGCCCCGTCTTCTGTGTTAGATTGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACTGTTTCAGCTGGAGCTaGGAGTCTGCGCCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHCFSWS*ESAPSC
Trigger: GCAGCTTGGCGCAGACTCCAAGCTCCAGCTGAAACA...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp CGGGGAATGAGTTCAAAGAAGACAACCGGTGCCCCTCCAGCATCTAAGTCTGGTACGTCCCTGACACGCTaGGACTGTTTCAGCTGGAGC +
Preference number: 5 (lower is better)
Translates to: RGMSSKKTTGAPPASKSGTSLTR*DCFSWS
Trigger: GCTCCAGCTGAAACAGTCCAAGCGTGTCAGGGACGT...ACCAGACTTAGATGCTGGAGGGGCACCGGTTGTCTTCTTTGAACTCATTCCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp TGTCTCGGGACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGCAAACCCAGCTTATTaGATTTCTGCAGCCAAGGAG +
Preference number: 5 (lower is better)
Translates to: CLGTHVSSGDTGGPRSQEANPAY*ISAAKE
Trigger: CTCCTTGGCTGCAGAAATCAAATAAGCTGGGTTTGC...TTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp TGTCTCGGGACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAAGGGAAATACCATTCTaGAGATGCCAGTACTCCCAC +
Preference number: 5 (lower is better)
Translates to: CLGTHVSSGDTGGPRSQEREIPF*RCQYSH
Trigger: GTGGGAGTACTGGCATCTCAAGAATGGTATTTCCCT...TTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS TCA 90 bp TGCTGTCAGAGAGCTCCAGTGTGTGGCTCCCACTGCTGTGGCAAATaGCACGCAGCTGCTCTTGTTCAAAATGCTCAGGAGCACGGCTTT +
Preference number: 5 (lower is better)
Translates to: CCQRAPVCGSHCCGK*HAAALVQNAQEHGF
Trigger: AAAGCCGTGCTCCTGAGCATTTTGAACAAGAGCAGCTGCGTGTCATTTGCCACAGCAGTGGGAGCCACACACTGGAGCTCTCTGACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS TCA 90 bp AGTTTATTTTCCCGTTGGAAAGCTGTAGACTCAGCTGCAGCTGCCTaGATGTGCACCTGTGGCATGATGCCAGGGCACTGGCTGGACTCC +
Preference number: 5 (lower is better)
Translates to: SLFSRWKAVDSAAAA*MCTCGMMPGHWLDS
Trigger: GGAGTCCAGCCAGTGCCCTGGCATCATGCCACAGGTGCACATTCAGGCAGCTGCAGCTGAGTCTACAGCTTTCCAACGGGAAAATAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS GCA 90 bp GCTCCCTGGCAGCTGGGGATTGCCGGGAGAGTTGAATGTGGCAGGTaGTTTCTGCACTTCATTGAACACACCAGGAGAAGACATATCTGG +
Preference number: 5 (lower is better)
Translates to: APWQLGIAGRVECGR*FLHFIEHTRRRHIW
Trigger: CCAGATATGTCTTCTCCTGGTGTGTTCAATGAAGTGCAGAAAGCACCTGCCACATTCAACTCTCCCGGCAATCCCCAGCTGCCAGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS GCA 90 bp CGCAAGTTTATTTTCCCGTTGGAAAGCTGTAGACTCAGCTGCAGCTaGCTGAATGTGCACCTGTGGCATGATGCCAGGGCACTGGCTGGA +
Preference number: 5 (lower is better)
Translates to: RKFIFPLESCRLSCS*LNVHLWHDARALAG
Trigger: TCCAGCCAGTGCCCTGGCATCATGCCACAGGTGCACATTCAGGCAGCTGCAGCTGAGTCTACAGCTTTCCAACGGGAAAATAAACTTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CCA 90 bp TGCTCATCCCACACGACGTCCCTGACACGCTTGGACTGTTTCAGCTaGAGCTTGGAGTCTGCGCCAAGCTGCTTTTTCTTATCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: CSSHTTSLTRLDCFS*SLESAPSCFFLSPG
Trigger: TCCAGGAGATAAGAAAAAGCAGCTTGGCGCAGACTCCAAGCTCCAGCTGAAACAGTCCAAGCGTGTCAGGGACGTCGTGTGGGATGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACCAATCTGGGTCTGTTTaGTGGCCGTTTGTCGTTTTC +
Preference number: 5 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYQSGSV*WPFVVF
Trigger: GAAAACGACAAACGGCCACAAAACAGACCCAGATTG...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp GACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGTATAATCATCCAGGCCAGTGCCTaGGAGGATACTCATGTGTCT +
Preference number: 5 (lower is better)
Translates to: DTRLFWRHGRAKVPGSIIIQASA*EDTHVS
Trigger: AGACACATGAGTATCCTCCAAGGCACTGGCCTGGAT...GATTATACTTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACCTGGTGGGAGGTGTTTaGGTTTACTCAGCCAAAGAA +
Preference number: 5 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYLVGGV*VYSAKE
Trigger: TTCTTTGGCTGAGTAAACCAAAACACCTCCCACCAG...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS TCA 90 bp TTCACTTTCAGCTTGGTTGGTCATCGTACTGGCTTCTTTGAACCTTaGCATCTGACGCTGTGCTGGCAGCGGCACCTTCTCTGGACCTGG +
Preference number: 5 (lower is better)
Translates to: FTFSLVGHRTGFFEP*HLTLCWQRHLLWTW
Trigger: CCAGGTCCAGAGAAGGTGCCGCTGCCAGCACAGCGTCAGATGTCAAGGTTCAAAGAAGCCAGTACGATGACCAACCAAGCTGAAAGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS GCA 90 bp GCACCTGAAAAGCCATTGGCATTCTTACACAGGAGAGCTGGTCGATaGCGAGGTGAGGCAGCCTGTGGCTCTCCTAGATCGTCTTCTTTT +
Preference number: 5 (lower is better)
Translates to: APEKPLAFLHRRAGR*RGEAACGSPRSSSF
Trigger: AAAAGAAGACGATCTAGGAGAGCCACAGGCTGCCTCACCTCGGCATCGACCAGCTCTCCTGTGTAAGAATGCCAATGGCTTTTCAGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp AATGCAGGGACAGCCTGTTCTAGCCACTTTACAGCAGAGGATTACCTGGGGCCACTCCCACAGGACAACTaGGTTTCTCAGGTTGCTCTC +
Preference number: 5 (lower is better)
Translates to: NAGTACSSHFTAEDYLGPLPQDN*VSQVAL
Trigger: GAGAGCAACCTGAGAAACCAAGTTGTCCTGTGGGAG...TGGCCCCAGGTAATCCTCTGCTGTAAAGTGGCTAGAACAGGCTGTCCCTGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCCACAGAAGTTGTGCCTaGGGGGCCCGAGGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLHRSCA*GARGSD
Trigger: GTCACTGCCTCGGGCCCCCAAGGCACAACTTCTGTG...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGGATTTCACTTTCAGCTaGGTTGGTCATCGTACTGGC +
Preference number: 5 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGDFTFS*VGHRTG
Trigger: GCCAGTACGATGACCAACCAAGCTGAAAGTGAAATC...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGACACGCAGCTGCTCTaGTTCAAAATGCTCAGGAGC +
Preference number: 5 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHDTQLL*FKMLRS
Trigger: GCTCCTGAGCATTTTGAACAAGAGCAGCTGCGTGTC...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp GACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGTATAATCTTTAACTTTTGCTCCTaGAGGAACTCGCTGACGCGG +
Preference number: 5 (lower is better)
Translates to: DTRLFWRHGRAKVPGSIIFNFCS*RNSLTR
Trigger: CCGCGTCAGCGAGTTCCTCAAGGAGCAAAAGTTAAA...GATTATACTTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp TGTCTCGGGACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAACTCATGTTCCCTGATTaGTCTTTGCAAATGGTTCTG +
Preference number: 5 (lower is better)
Translates to: CLGTHVSSGDTGGPRSQELMFPD*SLQMVL
Trigger: CAGAACCATTTGCAAAGACAAATCAGGGAACATGAG...TTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp GACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGTATAATCTCACAGAGATGCGCCTaGCCTTCAGTGCAGGAAAAT +
Preference number: 5 (lower is better)
Translates to: DTRLFWRHGRAKVPGSIISQRCA*PSVQEN
Trigger: ATTTTCCTGCACTGAAGGCAAGGCGCATCTCTGTGA...GATTATACTTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGTCACCAGACACCAAATaGGCCTTGATTTTGGGGTTC +
Preference number: 5 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGSPDTK*ALILGF
Trigger: GAACCCCAAAATCAAGGCCAATTTGGTGTCTGGTGA...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS GCA 90 bp GATTTGTCTTTGCAAATGGTTCTGGATCGCGATTCCCAGGGACTCTaGGTCCAAGGATGCACCATACACTTCCCAGGTCATTCCCTGCTC +
Preference number: 5 (lower is better)
Translates to: DLSLQMVLDRDSQGL*VQGCTIHFPGHSLL
Trigger: GAGCAGGGAATGACCTGGGAAGTGTATGGTGCATCCTTGGACGCAGAGTCCCTGGGAATCGCGATCCAGAACCATTTGCAAAGACAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGCTCCCACAGGACAACTaGGTTTCTCAGGTTGCTCTC +
Preference number: 5 (lower is better)
Translates to: GPLFILPFHTTPILKAMLLPQDN*VSQVAL
Trigger: GAGAGCAACCTGAGAAACCAAGTTGTCCTGTGGGAG...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGTGACAGAGGGCTGCTaGTTCTCTGAACATCCAGAT +
Preference number: 5 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHVTEGC*FSEHPD
Trigger: ATCTGGATGTTCAGAGAACAAGCAGCCCTCTGTCAC...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp CGGGGAATGAGTTCAAAGAAGACAACCGGTGCCCCTCCAGCATCTAAGTCTGGTAGGCTGGTGGCTGTCTaGGTCTGTCTGTTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: RGMSSKKTTGAPPASKSGRLVAV*VCLFSS
Trigger: AGAAGAAAACAGACAGACCAAGACAGCCACCAGCCT...ACCAGACTTAGATGCTGGAGGGGCACCGGTTGTCTTCTTTGAACTCATTCCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp GACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGTATAATCAACAGATACTGTGAATaGACTGTACCCACGGGACAC +
Preference number: 5 (lower is better)
Translates to: DTRLFWRHGRAKVPGSIINRYCE*TVPTGH
Trigger: GTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTT...GATTATACTTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGGCAGCTGACCCGAATTaGGAGAGAATCAACCAAAAA +
Preference number: 5 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGAADPN*ERINQK
Trigger: TTTTTGGTTGATTCTCTCCAAATTCGGGTCAGCTGC...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp GACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGTATAATCGCAAATAACATCTTGTaGCACCATTCTGGCCACCAC +
Preference number: 5 (lower is better)
Translates to: DTRLFWRHGRAKVPGSIIANNIL*HHSGHH
Trigger: GTGGTGGCCAGAATGGTGCAACAAGATGTTATTTGC...GATTATACTTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS CCA 90 bp AGGTGCTTTCTGCACTTCATTGAACACACCAGGAGAAGACATATCTaGTTGGGTGGTCTCATGCTCACAAACCTGCATCAGGGCTTCGGC +
Preference number: 5 (lower is better)
Translates to: RCFLHFIEHTRRRHI*LGGLMLTNLHQGFG
Trigger: GCCGAAGCCCTGATGCAGGTTTGTGAGCATGAGACCACCCAACCAGATATGTCTTCTCCTGGTGTGTTCAATGAAGTGCAGAAAGCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGGTGACAGAGGGCTGCTaGTTCTCTGAACATCCAGAT +
Preference number: 5 (lower is better)
Translates to: GPLFILPFHTTPILKAMLVTEGC*FSEHPD
Trigger: ATCTGGATGTTCAGAGAACAAGCAGCCCTCTGTCAC...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACCTGCTGGGAACTTCCTaGATTTCACTTTCAGCTTGG +
Preference number: 5 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHLLGTS*ISLSAW
Trigger: CCAAGCTGAAAGTGAAATCAAGGAAGTTCCCAGCAG...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp TTTTGTGACAATCTCTTGAGTGTTGTAGAAGTGAAGAATTTGGTCCCAGCACCACTGCGTGGGCTGGCTTaGACGGAGCGAGATGGGGTC +
Preference number: 5 (lower is better)
Translates to: FCDNLLSVVEVKNLVPAPLRGLA*TERDGV
Trigger: GACCCCATCTCGCTCCGTCAAAGCCAGCCCACGCAG...TGGTGCTGGGACCAAATTCTTCACTTCTACAACACTCAAGAGATTGTCACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCACGTCCCTGACACGCTaGGACTGTTTCAGCTGGAGC +
Preference number: 5 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLTSLTR*DCFSWS
Trigger: GCTCCAGCTGAAACAGTCCAAGCGTGTCAGGGACGT...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp CGGGGAATGAGTTCAAAGAAGACAACCGGTGCCCCTCCAGCATCTAAGTCTGGTAACAGATACTGTGAATaGACTGTACCCACGGGACAC +
Preference number: 5 (lower is better)
Translates to: RGMSSKKTTGAPPASKSGNRYCE*TVPTGH
Trigger: GTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTT...ACCAGACTTAGATGCTGGAGGGGCACCGGTTGTCTTCTTTGAACTCATTCCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp TGTCTCGGGACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAATTTTGTGACAATCTCTaGAGTGTTGTAGAAGTGAAG +
Preference number: 5 (lower is better)
Translates to: CLGTHVSSGDTGGPRSQEFCDNL*SVVEVK
Trigger: CTTCACTTCTACAACACTCAAGAGATTGTCACAAAA...TTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp AATGCAGGGACAGCCTGTTCTAGCCACTTTACAGCAGAGGATTACCTGGGGCCACAGTCTGTGCTTCAGTaGCTGGAGTTTTCTAAGCAC +
Preference number: 5 (lower is better)
Translates to: NAGTACSSHFTAEDYLGPQSVLQ*LEFSKH
Trigger: GTGCTTAGAAAACTCCAGCAACTGAAGCACAGACTG...TGGCCCCAGGTAATCCTCTGCTGTAAAGTGGCTAGAACAGGCTGTCCCTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp AATGCAGGGACAGCCTGTTCTAGCCACTTTACAGCAGAGGATTACCTGGGGCCAGGAAAAACCTCGCGTTaGATGACCAGGAGGAATTGT +
Preference number: 5 (lower is better)
Translates to: NAGTACSSHFTAEDYLGPGKTSR*MTRRNC
Trigger: ACAATTCCTCCTGGTCATCAAACGCGAGGTTTTTCC...TGGCCCCAGGTAATCCTCTGCTGTAAAGTGGCTAGAACAGGCTGTCCCTGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS TCA 90 bp GGAGCTTGGAGTCTGCGCCAAGCTGCTTTTTCTTATCTCCTGGAGTaGGTCCTACCTGAGCAGCAGCTGCTGTCACATTTAACTTTTGCT +
Preference number: 5 (lower is better)
Translates to: GAWSLRQAAFSYLLE*VLPEQQLLSHLTFA
Trigger: AGCAAAAGTTAAATGTGACAGCAGCTGCTGCTCAGGTAGGACTCACTCCAGGAGATAAGAAAAAGCAGCTTGGCGCAGACTCCAAGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCCACTCCAGAGCTCTCTaGAGTACTGGTCCCACTGGT +
Preference number: 5 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLHSRAL*STGPTG
Trigger: ACCAGTGGGACCAGTACTCAAGAGAGCTCTGGAGTG...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGAGAAGACATATCTGGTaGGGTGGTCTCATGCTCACA +
Preference number: 5 (lower is better)
Translates to: GPLFILPFHTTPILKAMLRRHIW*GGLMLT
Trigger: TGTGAGCATGAGACCACCCAACCAGATATGTCTTCT...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp ACCAAGAATAAATGTTTAAGTATGCAAGAGTTAGAGAATGGCAGCCACAGGGCAGAGGTGTCACAGAAGTaGTGCCTTGGGGGCCCGAGG +
Preference number: 5 (lower is better)
Translates to: TKNKCLSMQELENGSHRAEVSQK*CLGGPR
Trigger: CCTCGGGCCCCCAAGGCACAACTTCTGTGACACCTC...TGCCCTGTGGCTGCCATTCTCTAACTCTTGCATACTTAAACATTTATTCTTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGCTGCTGGGAACTTCCTaGATTTCACTTTCAGCTTGG +
Preference number: 5 (lower is better)
Translates to: GPLFILPFHTTPILKAMLLLGTS*ISLSAW
Trigger: CCAAGCTGAAAGTGAAATCAAGGAAGTTCCCAGCAG...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp AGTGCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACCTGTTTTGTGGCCGTTaGTCGTTTTCTCTGCAAACT +
Preference number: 5 (lower is better)
Translates to: SALEDTHVSRDTRLFWRHLFCGR*SFSLQT
Trigger: AGTTTGCAGAGAAAACGACAAACGGCCACAAAACAG...GTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp GCCTTGGAGGATACTCATGTGTCTCGGGACACACGTCTCTTCTGGAGACACGGGGCTCCTATTATGAATTaGGTTCTGAAATCCAACCTC +
Preference number: 5 (lower is better)
Translates to: ALEDTHVSRDTRLFWRHGAPIMN*VLKSNL
Trigger: GAGGTTGGATTTCAGAACCAAATTCATAATAGGAGC...CCCGTGTCTCCAGAAGAGACGTGTGTCCCGAGACACATGAGTATCCTCCAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp CGGGGAATGAGTTCAAAGAAGACAACCGGTGCCCCTCCAGCATCTAAGTCTGGTCTTGCAAATAACATCTaGTTGCACCATTCTGGCCAC +
Preference number: 5 (lower is better)
Translates to: RGMSSKKTTGAPPASKSGLANNI*LHHSGH
Trigger: GTGGCCAGAATGGTGCAACAAGATGTTATTTGCAAG...ACCAGACTTAGATGCTGGAGGGGCACCGGTTGTCTTCTTTGAACTCATTCCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGCTGGTTGCAGCTGTCTaGAGTTTTAAGCCAGCAAGA +
Preference number: 5 (lower is better)
Translates to: GPLFILPFHTTPILKAMLLVAAV*SFKPAR
Trigger: TCTTGCTGGCTTAAAACTCAAGACAGCTGCAACCAG...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACTTATCACCATGCAGGTaGATCATCAATATCCTTTTC +
Preference number: 5 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYLSPCR*IINILF
Trigger: GAAAAGGATATTGATGATCAACCTGCATGGTGATAA...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGGACTTCTCTTCGGTGTaGGTAGGCATAGTTTTGCTG +
Preference number: 5 (lower is better)
Translates to: GPLFILPFHTTPILKAMLDFSSV*VGIVLL
Trigger: CAGCAAAACTATGCCTACCAACACCGAAGAGAAGTC...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACGGAAATGAAGTTTTATaGGTCAATATCTGGAGGATG +
Preference number: 5 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYGNEVL*VNIWRM
Trigger: CATCCTCCAGATATTGACCAATAAAACTTCATTTCC...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp CAGAGGATTACCTGGGGCCACCCATCTGGAGTAGGCCCTGTTGACAGCTGCTACCAAGTATCTGTGCCATaGACAAATTGTAAAACTGTG +
Preference number: 5 (lower is better)
Translates to: QRITWGHPSGVGPVDSCYQVSVP*TNCKTV
Trigger: CACAGTTTTACAATTTGTCAATGGCACAGATACTTG...GTAGCAGCTGTCAACAGGGCCTACTCCAGATGGGTGGCCCCAGGTAATCCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS TCA 90 bp TCTGCGCCAAGCTGCTTTTTCTTATCTCCTGGAGTGAGTCCTACCTaGGCAGCAGCTGCTGTCACATTTAACTTTTGCTCCTTGAGGAAC +
Preference number: 5 (lower is better)
Translates to: SAPSCFFLSPGVSPT*AAAAVTFNFCSLRN
Trigger: GTTCCTCAAGGAGCAAAAGTTAAATGTGACAGCAGCTGCTGCTCAGGTAGGACTCACTCCAGGAGATAAGAAAAAGCAGCTTGGCGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS GCA 90 bp CAGTTGGGGCGTCGGAAGTTCTGCAGCATGGACTGGAAAACACTGTaGTGCCTTCCTCTGAGCTTCTTATTTGAAGAAGTATCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: QLGRRKFCSMDWKTL*CLPLSFLFEEVSEE
Trigger: TTCCTCAGATACTTCTTCAAATAAGAAGCTCAGAGGAAGGCAGCACAGTGTTTTCCAGTCCATGCTGCAGAACTTCCGACGCCCCAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp TTTTGTGACAATCTCTTGAGTGTTGTAGAAGTGAAGAATTTGGTCCCAGCACCACCTGGCAGCTGGGGATaGCCGGGAGAGTTGAATGTG +
Preference number: 5 (lower is better)
Translates to: FCDNLLSVVEVKNLVPAPPGSWG*PGELNV
Trigger: CACATTCAACTCTCCCGGCAATCCCCAGCTGCCAGG...TGGTGCTGGGACCAAATTCTTCACTTCTACAACACTCAAGAGATTGTCACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGTCTTGGGATTTAGGATaGAGCAGTAGGGTTTTGGCA +
Preference number: 5 (lower is better)
Translates to: GPLFILPFHTTPILKAMLSWDLG*SSRVLA
Trigger: TGCCAAAACCCTACTGCTCAATCCTAAATCCCAAGA...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp GACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGTATAATCAGGCCTCTTCTTTCATaGGGTTTGAAGGATATTATG +
Preference number: 5 (lower is better)
Translates to: DTRLFWRHGRAKVPGSIIRPLLS*GLKDIM
Trigger: CATAATATCCTTCAAACCCAATGAAAGAAGAGGCCT...GATTATACTTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGCACTCACAGAATGTATaGACATACCACGACCAGCTA +
Preference number: 5 (lower is better)
Translates to: GPLFILPFHTTPILKAMLHSQNV*TYHDQL
Trigger: TAGCTGGTCGTGGTATGTCAATACATTCTGTGAGTG...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGCCACCCAAGGGTTCATaGCTCATATCCTATTATCTC +
Preference number: 5 (lower is better)
Translates to: GPLFILPFHTTPILKAMLPPKGS*LISYYL
Trigger: GAGATAATAGGATATGAGCAATGAACCCTTGGGTGG...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp GACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGTATAATCATTCAGACAGGGTGGTaGACCAAAAGTGATCTTATA +
Preference number: 5 (lower is better)
Translates to: DTRLFWRHGRAKVPGSIIIQTGW*TKSDLI
Trigger: TATAAGATCACTTTTGGTCAACCACCCTGTCTGAAT...GATTATACTTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS GCA 90 bp TTGGGGCGTCGGAAGTTCTGCAGCATGGACTGGAAAACACTGTGCTaGCTTCCTCTGAGCTTCTTATTTGAAGAAGTATCTGAGGAAATG +
Preference number: 5 (lower is better)
Translates to: LGRRKFCSMDWKTLC*LPLSFLFEEVSEEM
Trigger: CATTTCCTCAGATACTTCTTCAAATAAGAAGCTCAGAGGAAGGCAGCACAGTGTTTTCCAGTCCATGCTGCAGAACTTCCGACGCCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCTTGAGCAGTAGGGTTTaGGCATCCGAGGTATCAGTG +
Preference number: 5 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLLSSRV*ASEVSV
Trigger: CACTGATACCTCGGATGCCAAAACCCTACTGCTCAA...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp TTTTGTGACAATCTCTTGAGTGTTGTAGAAGTGAAGAATTTGGTCCCAGCACCATGTTTCAGCTGGAGCTaGGAGTCTGCGCCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: FCDNLLSVVEVKNLVPAPCFSWS*ESAPSC
Trigger: GCAGCTTGGCGCAGACTCCAAGCTCCAGCTGAAACA...TGGTGCTGGGACCAAATTCTTCACTTCTACAACACTCAAGAGATTGTCACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp CGGGGAATGAGTTCAAAGAAGACAACCGGTGCCCCTCCAGCATCTAAGTCTGGTAGGCCTCTTCTTTCATaGGGTTTGAAGGATATTATG +
Preference number: 5 (lower is better)
Translates to: RGMSSKKTTGAPPASKSGRPLLS*GLKDIM
Trigger: CATAATATCCTTCAAACCCAATGAAAGAAGAGGCCT...ACCAGACTTAGATGCTGGAGGGGCACCGGTTGTCTTCTTTGAACTCATTCCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp GACACACGTCTCTTCTGGAGACACGGGAGGGCCAAGGTCCCAGGAAGTATAATCAAAAATGCTGCTGTCTaGAATAGGTCCCTATCTTAT +
Preference number: 5 (lower is better)
Translates to: DTRLFWRHGRAKVPGSIIKNAAV*NRSLSY
Trigger: ATAAGATAGGGACCTATTCAAGACAGCAGCATTTTT...GATTATACTTCCTGGGACCTTGGCCCTCCCGTGTCTCCAGAAGAGACGTGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGCAATTAGCTCAGTGGTaGTGTAGAATGGTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: GPLFILPFHTTPILKAMLQLAQW*CRMVLK
Trigger: CTTCAACACCATTCTACACAACCACTGAGCTAATTG...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCAGAAGACATATCTGGTaGGGTGGTCTCATGCTCACA +
Preference number: 5 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLRRHIW*GGLMLT
Trigger: TGTGAGCATGAGACCACCCAACCAGATATGTCTTCT...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCGATTTCACTTTCAGCTaGGTTGGTCATCGTACTGGC +
Preference number: 5 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLDFTFS*VGHRTG
Trigger: GCCAGTACGATGACCAACCAAGCTGAAAGTGAAATC...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp CGGGGAATGAGTTCAAAGAAGACAACCGGTGCCCCTCCAGCATCTAAGTCTGGTTTCAATTTGTTAAGGTaGCAAACCTTCAGTGAAGCT +
Preference number: 5 (lower is better)
Translates to: RGMSSKKTTGAPPASKSGFNLLR*QTFSEA
Trigger: AGCTTCACTGAAGGTTTGCAACCTTAACAAATTGAA...ACCAGACTTAGATGCTGGAGGGGCACCGGTTGTCTTCTTTGAACTCATTCCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CCA 90 bp ATAGAGCCACAAGAGTCAGATAGTTTGCAATCTGGGTCTGTTTTGTaGCCGTTTGTCGTTTTCTCTGCAAACTCAGATGGCCTGGTTTCA +
Preference number: 5 (lower is better)
Translates to: IEPQESDSLQSGSVL*PFVVFSANSDGLVS
Trigger: TGAAACCAGGCCATCTGAGTTTGCAGAGAAAACGACAAACGGCCACAAAACAGACCCAGATTGCAAACTATCTGACTCTTGTGGCTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CCA 90 bp TTGATTAATTTCTCATGTTCCCTGATTTGTCTTTGCAAATGGTTCTaGATCGCGATTCCCAGGGACTCTGCGTCCAAGGATGCACCATAC +
Preference number: 5 (lower is better)
Translates to: LINFSCSLICLCKWF*IAIPRDSASKDAPY
Trigger: GTATGGTGCATCCTTGGACGCAGAGTCCCTGGGAATCGCGATCCAGAACCATTTGCAAAGACAAATCAGGGAACATGAGAAATTAATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGGACACGCAGCTGCTCTaGTTCAAAATGCTCAGGAGC +
Preference number: 5 (lower is better)
Translates to: SRVRKYEYVWSESQRCALDTQLL*FKMLRS
Trigger: GCTCCTGAGCATTTTGAACAAGAGCAGCTGCGTGTC...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCCTGTTTTGTGGCCGTTaGTCGTTTTCTCTGCAAACT +
Preference number: 5 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLLFCGR*SFSLQT
Trigger: AGTTTGCAGAGAAAACGACAAACGGCCACAAAACAG...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGATCCAGGCCAGTGCCTaGGAGGATACTCATGTGTCT +
Preference number: 5 (lower is better)
Translates to: SRVRKYEYVWSESQRCALIQASA*EDTHVS
Trigger: AGACACATGAGTATCCTCCAAGGCACTGGCCTGGAT...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp GGGCCGTTGTTCATTCTTCCTTTCCACACTACCCCAATTCTCAAGGCGATGCTGGATTTTCATCCCTGTTaGCCATTTCCAGATATGAAA +
Preference number: 5 (lower is better)
Translates to: GPLFILPFHTTPILKAMLDFHPC*PFPDMK
Trigger: TTTCATATCTGGAAATGGCAAACAGGGATGAAAATC...CAGCATCGCCTTGAGAATTGGGGTAGTGTGGAAAGGAAGAATGAACAACGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCAAGTTTATTTTCCCGTaGGAAAGCTGTAGACTCAGC +
Preference number: 5 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLKFIFP*ESCRLS
Trigger: GCTGAGTCTACAGCTTTCCAACGGGAAAATAAACTT...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTTGTGCCTCCACTTTCTaGGGATTTAGGATTGAGCAG +
Preference number: 5 (lower is better)
Translates to: STQITSHVFVKASSFIGFCASTF*GFRIEQ
Trigger: CTGCTCAATCCTAAATCCCAAGAAAGTGGAGGCACA...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS TCA 90 bp TTTTCCCTTGCATCTCCTTTATTAGTGGGATCCAAGCTCCCAGAATaGTCAGCTTTGCTGATAGAGCCACAAGAGTCAGATAGTTTGCAA +
Preference number: 5 (lower is better)
Translates to: FSLASPLLVGSKLPE*SALLIEPQESDSLQ
Trigger: TTGCAAACTATCTGACTCTTGTGGCTCTATCAGCAAAGCTGATCATTCTGGGAGCTTGGATCCCACTAATAAAGGAGATGCAAGGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp TTTTGTGACAATCTCTTGAGTGTTGTAGAAGTGAAGAATTTGGTCCCAGCACCATCACTTTCAGCTTGGTaGGTCATCGTACTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: FCDNLLSVVEVKNLVPAPSLSAW*VIVLAS
Trigger: AGAAGCCAGTACGATGACCAACCAAGCTGAAAGTGA...TGGTGCTGGGACCAAATTCTTCACTTCTACAACACTCAAGAGATTGTCACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp GCATCGTTTTCTGTAAGGCATCATTTGAAGCCTCTTTGGATACAAGATCTCATGTCACTTTCAGCTTGGTaGGTCATCGTACTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: ASFSVRHHLKPLWIQDLMSLSAW*VIVLAS
Trigger: AGAAGCCAGTACGATGACCAACCAAGCTGAAAGTGA...CATGAGATCTTGTATCCAAAGAGGCTTCAAATGATGCCTTACAGAAAACGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp GCATCGTTTTCTGTAAGGCATCATTTGAAGCCTCTTTGGATACAAGATCTCATGCAATCTGGGTCTGTTTaGTGGCCGTTTGTCGTTTTC +
Preference number: 5 (lower is better)
Translates to: ASFSVRHHLKPLWIQDLMQSGSV*WPFVVF
Trigger: GAAAACGACAAACGGCCACAAAACAGACCCAGATTG...CATGAGATCTTGTATCCAAAGAGGCTTCAAATGATGCCTTACAGAAAACGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGTGTGCCTCCACTTTCTaGGGATTTAGGATTGAGCAG +
Preference number: 5 (lower is better)
Translates to: SRVRKYEYVWSESQRCALCASTF*GFRIEQ
Trigger: CTGCTCAATCCTAAATCCCAAGAAAGTGGAGGCACA...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTTTCCCTGATTTGTCTTaGCAAATGGTTCTGGATCGC +
Preference number: 5 (lower is better)
Translates to: STQITSHVFVKASSFIGFFPDLS*QMVLDR
Trigger: GCGATCCAGAACCATTTGCAAAGACAAATCAGGGAA...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGCAGGATGTTCAACTTTaGCCAGTGACCCAAAGCACA +
Preference number: 5 (lower is better)
Translates to: SRVRKYEYVWSESQRCALQDVQL*PVTQST
Trigger: TGTGCTTTGGGTCACTGGCAAAAGTTGAACATCCTG...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCGAAACAAGAGGTATTTaGAGTTCACAATCAGTCCAG +
Preference number: 5 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLETRGI*SSQSVQ
Trigger: CTGGACTGATTGTGAACTCAAAATACCTCTTGTTTC...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp TTTTGTGACAATCTCTTGAGTGTTGTAGAAGTGAAGAATTTGGTCCCAGCACCAAGGCTCTTTTGCAGTTaGATTGAGAGACGTCAAGCG +
Preference number: 5 (lower is better)
Translates to: FCDNLLSVVEVKNLVPAPRLFCS*IERRQA
Trigger: CGCTTGACGTCTCTCAATCAAACTGCAAAAGAGCCT...TGGTGCTGGGACCAAATTCTTCACTTCTACAACACTCAAGAGATTGTCACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTAAGTTTATTTTCCCGTaGGAAAGCTGTAGACTCAGC +
Preference number: 5 (lower is better)
Translates to: STQITSHVFVKASSFIGFKFIFP*ESCRLS
Trigger: GCTGAGTCTACAGCTTTCCAACGGGAAAATAAACTT...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGTCCCCAATCCATAACTaGTTTCAGCTTGACTGCATG +
Preference number: 5 (lower is better)
Translates to: SRVRKYEYVWSESQRCALSPIHN*FQLDCM
Trigger: CATGCAGTCAAGCTGAAACAAGTTATGGATTGGGGA...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp ACCAAGAATAAATGTTTAAGTATGCAAGAGTTAGAGAATGGCAGCCACAGGGCATCCCCAATCCATAACTaGTTTCAGCTTGACTGCATG +
Preference number: 5 (lower is better)
Translates to: TKNKCLSMQELENGSHRASPIHN*FQLDCM
Trigger: CATGCAGTCAAGCTGAAACAAGTTATGGATTGGGGA...TGCCCTGTGGCTGCCATTCTCTAACTCTTGCATACTTAAACATTTATTCTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGTTCCCTGATTTGTCTTaGCAAATGGTTCTGGATCGC +
Preference number: 5 (lower is better)
Translates to: SRVRKYEYVWSESQRCALFPDLS*QMVLDR
Trigger: GCGATCCAGAACCATTTGCAAAGACAAATCAGGGAA...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCTTTTGTGACAATCTCTaGAGTGTTGTAGAAGTGAAG +
Preference number: 5 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLFCDNL*SVVEVK
Trigger: CTTCACTTCTACAACACTCAAGAGATTGTCACAAAA...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCACCAAGAAAACTGTTTaGCAGCTTCATCTGTTGAAT +
Preference number: 5 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLTKKTV*QLHLLN
Trigger: ATTCAACAGATGAAGCTGCAAAACAGTTTTCTTGGT...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTGATGTCACTGATCACTaGGGAGACAGAATTTTTCCA +
Preference number: 5 (lower is better)
Translates to: STQITSHVFVKASSFIGFDVTDH*GDRIFP
Trigger: TGGAAAAATTCTGTCTCCCAAGTGATCAGTGACATC...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp AAAAGCCAGAACAGATACTGTGAATTGACTGTACCCACGGGACACATGAGTCTCTCATTTGAAGCCTCTTaGGATACAAGATCTCATGTT +
Preference number: 5 (lower is better)
Translates to: KSQNRYCELTVPTGHMSLSFEAS*DTRSHV
Trigger: AACATGAGATCTTGTATCCAAAGAGGCTTCAAATGA...GAGACTCATGTGTCCCGTGGGTACAGTCAATTCACAGTATCTGTTCTGGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGCAAGAGTCAGATAGTTaGCAATCTGGGTCTGTTTTG +
Preference number: 5 (lower is better)
Translates to: SRVRKYEYVWSESQRCALQESDS*QSGSVL
Trigger: CAAAACAGACCCAGATTGCAAACTATCTGACTCTTG...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp CTTTCTAACATCATTAAATCACTGGGGTATCTCATCATAATTATCACCATGCAGTTGAGCAGTAGGGTTTaGGCATCCGAGGTATCAGTG +
Preference number: 5 (lower is better)
Translates to: LSNIIKSLGYLIIIITMQLSSRV*ASEVSV
Trigger: CACTGATACCTCGGATGCCAAAACCCTACTGCTCAA...CTGCATGGTGATAATTATGATGAGATACCCCAGTGATTTAATGATGTTAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp CTTTCTAACATCATTAAATCACTGGGGTATCTCATCATAATTATCACCATGCAGTTTAACTTTTGCTCCTaGAGGAACTCGCTGACGCGG +
Preference number: 5 (lower is better)
Translates to: LSNIIKSLGYLIIIITMQFNFCS*RNSLTR
Trigger: CCGCGTCAGCGAGTTCCTCAAGGAGCAAAAGTTAAA...CTGCATGGTGATAATTATGATGAGATACCCCAGTGATTTAATGATGTTAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGCTCATGTTCCCTGATTaGTCTTTGCAAATGGTTCTG +
Preference number: 5 (lower is better)
Translates to: SRVRKYEYVWSESQRCALLMFPD*SLQMVL
Trigger: CAGAACCATTTGCAAAGACAAATCAGGGAACATGAG...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp CTTTCTAACATCATTAAATCACTGGGGTATCTCATCATAATTATCACCATGCAGTCACAGAGATGCGCCTaGCCTTCAGTGCAGGAAAAT +
Preference number: 5 (lower is better)
Translates to: LSNIIKSLGYLIIIITMQSQRCA*PSVQEN
Trigger: ATTTTCCTGCACTGAAGGCAAGGCGCATCTCTGTGA...CTGCATGGTGATAATTATGATGAGATACCCCAGTGATTTAATGATGTTAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp TTTTGTGACAATCTCTTGAGTGTTGTAGAAGTGAAGAATTTGGTCCCAGCACCATTGGTAGGCATAGTTTaGCTGAGCTCAAGAGAAGAA +
Preference number: 5 (lower is better)
Translates to: FCDNLLSVVEVKNLVPAPLVGIV*LSSREE
Trigger: TTCTTCTCTTGAGCTCAGCAAAACTATGCCTACCAA...TGGTGCTGGGACCAAATTCTTCACTTCTACAACACTCAAGAGATTGTCACAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTCTGAGAAGTGGTTGTTaGTACTTTGCCAAATGGAAT +
Preference number: 5 (lower is better)
Translates to: STQITSHVFVKASSFIGFLRSGC*YFAKWN
Trigger: ATTCCATTTGGCAAAGTACAAACAACCACTTCTCAG...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp GCATCGTTTTCTGTAAGGCATCATTTGAAGCCTCTTTGGATACAAGATCTCATGTTATACCTCCTAAGGTaGAGACATAGATGGAAGTGC +
Preference number: 5 (lower is better)
Translates to: ASFSVRHHLKPLWIQDLMLYLLR*RHRWKC
Trigger: GCACTTCCATCTATGTCTCAACCTTAGGAGGTATAA...CATGAGATCTTGTATCCAAAGAGGCTTCAAATGATGCCTTACAGAAAACGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp ACCAAGAATAAATGTTTAAGTATGCAAGAGTTAGAGAATGGCAGCCACAGGGCATCTCCAAATTTCATGTaGAAATTTGGAGGTGGGGTC +
Preference number: 5 (lower is better)
Translates to: TKNKCLSMQELENGSHRASPNFM*KFGGGV
Trigger: GACCCCACCTCCAAATTTCAACATGAAATTTGGAGA...TGCCCTGTGGCTGCCATTCTCTAACTCTTGCATACTTAAACATTTATTCTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTTTCAATTTGTTAAGGTaGCAAACCTTCAGTGAAGCT +
Preference number: 5 (lower is better)
Translates to: STQITSHVFVKASSFIGFFNLLR*QTFSEA
Trigger: AGCTTCACTGAAGGTTTGCAACCTTAACAAATTGAA...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTAAAAATGCTGCTGTCTaGAATAGGTCCCTATCTTAT +
Preference number: 5 (lower is better)
Translates to: STQITSHVFVKASSFIGFKNAAV*NRSLSY
Trigger: ATAAGATAGGGACCTATTCAAGACAGCAGCATTTTT...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp ACCAAGAATAAATGTTTAAGTATGCAAGAGTTAGAGAATGGCAGCCACAGGGCATTGAGAGAGGTTATTTaGTTGTGGCAAGTGAGTAGT +
Preference number: 5 (lower is better)
Translates to: TKNKCLSMQELENGSHRALREVI*LWQVSS
Trigger: ACTACTCACTTGCCACAACAAAATAACCTCTCTCAA...TGCCCTGTGGCTGCCATTCTCTAACTCTTGCATACTTAAACATTTATTCTTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp TCCACCCAAATCACAAGCCATGTTTTCGTAAAGGCCTCTTCTTTCATTGGGTTTTGCAGCCAATTAATTTaGAGCTTGAATCCAGAAAGA +
Preference number: 5 (lower is better)
Translates to: STQITSHVFVKASSFIGFCSQLI*SLNPER
Trigger: TCTTTCTGGATTCAAGCTCAAAATTAATTGGCTGCA...AAACCCAATGAAAGAAGAGGCCTTTACGAAAACATGGCTTGTGATTTGGGTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp CTTTCTAACATCATTAAATCACTGGGGTATCTCATCATAATTATCACCATGCAGTCTTGGGATTTAGGATaGAGCAGTAGGGTTTTGGCA +
Preference number: 5 (lower is better)
Translates to: LSNIIKSLGYLIIIITMQSWDLG*SSRVLA
Trigger: TGCCAAAACCCTACTGCTCAATCCTAAATCCCAAGA...CTGCATGGTGATAATTATGATGAGATACCCCAGTGATTTAATGATGTTAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp TTTTGTGACAATCTCTTGAGTGTTGTAGAAGTGAAGAATTTGGTCCCAGCACCAACCAAGAAAACTGTTTaGCAGCTTCATCTGTTGAAT +
Preference number: 5 (lower is better)
Translates to: FCDNLLSVVEVKNLVPAPTKKTV*QLHLLN
Trigger: ATTCAACAGATGAAGCTGCAAAACAGTTTTCTTGGT...TGGTGCTGGGACCAAATTCTTCACTTCTACAACACTCAAGAGATTGTCACAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS-3UTR CAA 90 bp GCATCGTTTTCTGTAAGGCATCATTTGAAGCCTCTTTGGATACAAGATCTCATGAGAGAGGTTATTTTGTaGTGGCAAGTGAGTAGTTTA +
Preference number: 5 (lower is better)
Translates to: ASFSVRHHLKPLWIQDLMREVIL*WQVSSL
Trigger: TAAACTACTCACTTGCCACAACAAAATAACCTCTCT...CATGAGATCTTGTATCCAAAGAGGCTTCAAATGATGCCTTACAGAAAACGATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp ACCAAGAATAAATGTTTAAGTATGCAAGAGTTAGAGAATGGCAGCCACAGGGCAATGTTTCAGGATTGTTaGTTGCTGCTATCTACACAT +
Preference number: 5 (lower is better)
Translates to: TKNKCLSMQELENGSHRAMFQDC*LLLSTH
Trigger: ATGTGTAGATAGCAGCAACAAACAATCCTGAAACAT...TGCCCTGTGGCTGCCATTCTCTAACTCTTGCATACTTAAACATTTATTCTTGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGAATGTAGGGCTTTTATaGGTTTGTGCAAATCAACAC +
Preference number: 5 (lower is better)
Translates to: SRVRKYEYVWSESQRCALNVGLL*VCANQH
Trigger: GTGTTGATTTGCACAAACCAATAAAAGCCCTACATT...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp ACCAAGAATAAATGTTTAAGTATGCAAGAGTTAGAGAATGGCAGCCACAGGGCAGTGATCATATCCACTTaGAGTGATTATACATGCTTG +
Preference number: 5 (lower is better)
Translates to: TKNKCLSMQELENGSHRAVIIST*SDYTCL
Trigger: CAAGCATGTATAATCACTCAAAGTGGATATGATCAC...TGCCCTGTGGCTGCCATTCTCTAACTCTTGCATACTTAAACATTTATTCTTGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGCAGATCCTTGATGAATaGAAGATATTCAAGGAGGTA +
Preference number: 5 (lower is better)
Translates to: SRVRKYEYVWSESQRCALQILDE*KIFKEV
Trigger: TACCTCCTTGAATATCTTCAATTCATCAAGGATCTG...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp TCTAGGGTAAGAAAATATGAATATGTCTGGTCAGAATCACAGAGATGCGCCTTGAGGATGTTCTTCTGTTaGCTACTCAACATTGAAGAT +
Preference number: 5 (lower is better)
Translates to: SRVRKYEYVWSESQRCALRMFFC*LLNIED
Trigger: ATCTTCAATGTTGAGTAGCAAACAGAAGAACATCCT...CAAGGCGCATCTCTGTGATTCTGACCAGACATATTCATATTTTCTTACCCTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS-3UTR CAA 90 bp CTTTCTAACATCATTAAATCACTGGGGTATCTCATCATAATTATCACCATGCAGCAAGAGTCAGATAGTTaGCAATCTGGGTCTGTTTTG +
Preference number: 5 (lower is better)
Translates to: LSNIIKSLGYLIIIITMQQESDS*QSGSVL
Trigger: CAAAACAGACCCAGATTGCAAACTATCTGACTCTTG...CTGCATGGTGATAATTATGATGAGATACCCCAGTGATTTAATGATGTTAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS TCA 90 bp AATGGGGACTTAATCTATGACAAAAGAAGTATTACAATTTGGTGGTaGAAGGCTGAGTTATTTCATAGAAGGAGTTGGCAAACTGTTCAT +
Preference number: 5 (lower is better)
Translates to: NGDLIYDKRSITIWW*KAELFHRRSWQTVH
Trigger: ATGAACAGTTTGCCAACTCCTTCTATGAAATAACTCAGCCTTTCACCACCAAATTGTAATACTTCTTTTGTCATAGATTAAGTCCCCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333209.4
CDS-3UTR CAA 90 bp AGGCCTCTTCTTTCATTGGGTTTGAAGGATATTATGGGTATTTCTCTTAAAATCGTGGTTGTTTGTACTTaGCCAAATGGAATTCTCTAT +
Preference number: 5 (lower is better)
Translates to: RPLLSLGLKDIMGISLKIVVVCT*PNGILY
Trigger: ATAGAGAATTCCATTTGGCAAAGTACAAACAACCAC...GATTTTAAGAGAAATACCCATAATATCCTTCAAACCCAATGAAAGAAGAGGCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS TCA 72 bp CGGCGCCACACCGATGGCTCCGGCGGGCCCGCGAGCTaGGGTCCTTCTCAGCCCGGTCCCGGAGCGAGCTCC +
Preference number: 6 (lower is better)
Translates to: RRHTDGSGGPAS*GPSQPGPGASS
Trigger: GGAGCTCGCTCCGGGACCGGGCTGAGAAGGACCTCAGCTCGCGGGCCCGCCGGAGCCATCGGTGTGGCGCCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS GCA 72 bp CTCTGCCCGGCTCCGCGGCGCGGCGGGGCCACTGCCTaGGCTGTGGCGGGGGCTTCCCGTCGCATATCCCAA +
Preference number: 6 (lower is better)
Translates to: LCPAPRRGGATA*AVAGASRRISQ
Trigger: TTGGGATATGCGACGGGAAGCCCCCGCCACAGCGCAGGCAGTGGCCCCGCCGCGCCGCGGAGCCGGGCAGAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS CCA 72 bp GCATATCCCAAGCACCGTCTCTCGGCGCCACACCGATaGCTCCGGCGGGCCCGCGAGCTGAGGTCCTTCTCA +
Preference number: 6 (lower is better)
Translates to: AYPKHRLSAPHR*LRRARELRSFS
Trigger: TGAGAAGGACCTCAGCTCGCGGGCCCGCCGGAGCCATCGGTGTGGCGCCGAGAGACGGTGCTTGGGATATGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609438.2
CDS GCA 72 bp GCTGGTGGAGACGGATCTGCTCTCGACACTCGCCACTaGCTGCACCTCCGCATCTTGCCAAGCCCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: AGGDGSALDTRH*LHLRILPSPAG
Trigger: CCCAGCAGGGCTTGGCAAGATGCGGAGGTGCAGGCAGTGGCGAGTGTCGAGAGCAGATCCGTCTCCACCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CCA 72 bp GCTGGGCCTGCGTGGGCTGGCTTTGACGGAGCGAGATaGGGTCTTCTTGCCAGAACCTGGGCTGGAGTCACC +
Preference number: 6 (lower is better)
Translates to: AGPAWAGFDGAR*GLLARTWAGVT
Trigger: GGTGACTCCAGCCCAGGTTCTGGCAAGAAGACCCCATCTCGCTCCGTCAAAGCCAGCCCACGCAGGCCCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CAA 90 bp TCCTTGAGGAACTCGCTGACGCGGCTGGGCCTGCGTGGGCTGGCTTaGACGGAGCGAGATGGGGTCTTCTTGCCAGAACCTGGGCTGGAG +
Preference number: 6 (lower is better)
Translates to: SLRNSLTRLGLRGLA*TERDGVFLPEPGLE
Trigger: CTCCAGCCCAGGTTCTGGCAAGAAGACCCCATCTCGCTCCGTCAAAGCCAGCCCACGCAGGCCCAGCCGCGTCAGCGAGTTCCTCAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CAA 72 bp AACTCGCTGACGCGGCTGGGCCTGCGTGGGCTGGCTTaGACGGAGCGAGATGGGGTCTTCTTGCCAGAACCT +
Preference number: 6 (lower is better)
Translates to: NSLTRLGLRGLA*TERDGVFLPEP
Trigger: AGGTTCTGGCAAGAAGACCCCATCTCGCTCCGTCAAAGCCAGCCCACGCAGGCCCAGCCGCGTCAGCGAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CAA 90 bp CTGGGCCTGCGTGGGCTGGCTTTGACGGAGCGAGATGGGGTCTTCTaGCCAGAACCTGGGCTGGAGTCACCCATGGGATCAGATGGCAGG +
Preference number: 6 (lower is better)
Translates to: LGLRGLALTERDGVF*PEPGLESPMGSDGR
Trigger: CCTGCCATCTGATCCCATGGGTGACTCCAGCCCAGGTTCTGGCAAGAAGACCCCATCTCGCTCCGTCAAAGCCAGCCCACGCAGGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CCA 72 bp CGGAGCGAGATGGGGTCTTCTTGCCAGAACCTGGGCTaGAGTCACCCATGGGATCAGATGGCAGGCTCAGGC +
Preference number: 6 (lower is better)
Translates to: RSEMGSSCQNLG*SHPWDQMAGSG
Trigger: GCCTGAGCCTGCCATCTGATCCCATGGGTGACTCCAGCCCAGGTTCTGGCAAGAAGACCCCATCTCGCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CCA 72 bp TGTAGACTCAGCTGCAGCTGCCTGAATGTGCACCTGTaGCATGATGCCAGGGCACTGGCTGGACTCCTGGGG +
Preference number: 6 (lower is better)
Translates to: CRLSCSCLNVHL*HDARALAGLLG
Trigger: CCCCAGGAGTCCAGCCAGTGCCCTGGCATCATGCCACAGGTGCACATTCAGGCAGCTGCAGCTGAGTCTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CCA 72 bp GGGTCTTCTTGCCAGAACCTGGGCTGGAGTCACCCATaGGATCAGATGGCAGGCTCAGGCTGGTGGCTGTCT +
Preference number: 6 (lower is better)
Translates to: GSSCQNLGWSHP*DQMAGSGWWLS
Trigger: AGACAGCCACCAGCCTGAGCCTGCCATCTGATCCCATGGGTGACTCCAGCCCAGGTTCTGGCAAGAAGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CAA 72 bp CGTGGGCTGGCTTTGACGGAGCGAGATGGGGTCTTCTaGCCAGAACCTGGGCTGGAGTCACCCATGGGATCA +
Preference number: 6 (lower is better)
Translates to: RGLALTERDGVF*PEPGLESPMGS
Trigger: TGATCCCATGGGTGACTCCAGCCCAGGTTCTGGCAAGAAGACCCCATCTCGCTCCGTCAAAGCCAGCCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS TCA 72 bp CCCCTTCAGGTCCACCTACAGGAGAGGATGAGTGACTaGCCACCCTGGCTGCTGTCACTGGAGTCTGCACTG +
Preference number: 6 (lower is better)
Translates to: PLQVHLQERMSD*PPWLLSLESAL
Trigger: CAGTGCAGACTCCAGTGACAGCAGCCAGGGTGGTCAGTCACTCATCCTCTCCTGTAGGTGGACCTGAAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS GCA 72 bp GACATATCTGGTTGGGTGGTCTCATGCTCACAAACCTaGATCAGGGCTTCGGCAGCTGCCCTGGGGCTGAGG +
Preference number: 6 (lower is better)
Translates to: DISGWVVSCSQT*IRASAAALGLR
Trigger: CCTCAGCCCCAGGGCAGCTGCCGAAGCCCTGATGCAGGTTTGTGAGCATGAGACCACCCAACCAGATATGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS GCA 72 bp GCAGGACGGACGCAGCAGTTGGGGCGTCGGAAGTTCTaGAGCATGGACTGGAAAACACTGTGCTGCCTTCCT +
Preference number: 6 (lower is better)
Translates to: AGRTQQLGRRKF*SMDWKTLCCLP
Trigger: AGGAAGGCAGCACAGTGTTTTCCAGTCCATGCTGCAGAACTTCCGACGCCCCAACTGCTGCGTCCGTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CAA 90 bp TCCCAGGTCATTCCCTGCTCATCCCACACGACGTCCCTGACACGCTaGGACTGTTTCAGCTGGAGCTTGGAGTCTGCGCCAAGCTGCTTT +
Preference number: 6 (lower is better)
Translates to: SQVIPCSSHTTSLTR*DCFSWSLESAPSCF
Trigger: AAAGCAGCTTGGCGCAGACTCCAAGCTCCAGCTGAAACAGTCCAAGCGTGTCAGGGACGTCGTGTGGGATGAGCAGGGAATGACCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS TCA 72 bp TGCCCTGGGGCTGAGGTCTGGTTCTGCAGGGGCACCTaGAAAGCCATTGGCATTCTTACACAGGAGAGCTGG +
Preference number: 6 (lower is better)
Translates to: CPGAEVWFCRGT*KAIGILTQESW
Trigger: CCAGCTCTCCTGTGTAAGAATGCCAATGGCTTTTCAGGTGCCCCTGCAGAACCAGACCTCAGCCCCAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS TCA 72 bp CTTTCCCCTTCAGGTCCACCTACAGGAGAGGATGAGTaGCTGACCACCCTGGCTGCTGTCACTGGAGTCTGC +
Preference number: 6 (lower is better)
Translates to: LSPSGPPTGEDE*LTTLAAVTGVC
Trigger: GCAGACTCCAGTGACAGCAGCCAGGGTGGTCAGTCACTCATCCTCTCCTGTAGGTGGACCTGAAGGGGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS TCA 72 bp CTGCCTTTCCCCTTCAGGTCCACCTACAGGAGAGGATaGGTGACTGACCACCCTGGCTGCTGTCACTGGAGT +
Preference number: 6 (lower is better)
Translates to: LPFPFRSTYRRG*VTDHPGCCHWS
Trigger: ACTCCAGTGACAGCAGCCAGGGTGGTCAGTCACTCATCCTCTCCTGTAGGTGGACCTGAAGGGGAAAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS TCA 72 bp TCCCGTTGGAAAGCTGTAGACTCAGCTGCAGCTGCCTaGATGTGCACCTGTGGCATGATGCCAGGGCACTGG +
Preference number: 6 (lower is better)
Translates to: SRWKAVDSAAAA*MCTCGMMPGHW
Trigger: CCAGTGCCCTGGCATCATGCCACAGGTGCACATTCAGGCAGCTGCAGCTGAGTCTACAGCTTTCCAACGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CCA 72 bp TTTGACGGAGCGAGATGGGGTCTTCTTGCCAGAACCTaGGCTGGAGTCACCCATGGGATCAGATGGCAGGCT +
Preference number: 6 (lower is better)
Translates to: FDGARWGLLART*AGVTHGIRWQA
Trigger: AGCCTGCCATCTGATCCCATGGGTGACTCCAGCCCAGGTTCTGGCAAGAAGACCCCATCTCGCTCCGTCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CCA 72 bp CTAACACAGAAGACGGGGCAGGACGGACGCAGCAGTTaGGGCGTCGGAAGTTCTGCAGCATGGACTGGAAAA +
Preference number: 6 (lower is better)
Translates to: LTQKTGQDGRSS*GVGSSAAWTGK
Trigger: TTTTCCAGTCCATGCTGCAGAACTTCCGACGCCCCAACTGCTGCGTCCGTCCTGCCCCGTCTTCTGTGTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CAA 72 bp GCTCTCGACACTCGCCACTGCCTGCACCTCCGCATCTaGCCAAGCCCTGCTGGGAACTTCCTTGATTTCACT +
Preference number: 6 (lower is better)
Translates to: ALDTRHCLHLRI*PSPAGNFLDFT
Trigger: AGTGAAATCAAGGAAGTTCCCAGCAGGGCTTGGCAAGATGCGGAGGTGCAGGCAGTGGCGAGTGTCGAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CAA 72 bp ATTCCCTGCTCATCCCACACGACGTCCCTGACACGCTaGGACTGTTTCAGCTGGAGCTTGGAGTCTGCGCCA +
Preference number: 6 (lower is better)
Translates to: IPCSSHTTSLTR*DCFSWSLESAP
Trigger: TGGCGCAGACTCCAAGCTCCAGCTGAAACAGTCCAAGCGTGTCAGGGACGTCGTGTGGGATGAGCAGGGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CAA 72 bp TCTAACACAGAAGACGGGGCAGGACGGACGCAGCAGTaGGGGCGTCGGAAGTTCTGCAGCATGGACTGGAAA +
Preference number: 6 (lower is better)
Translates to: SNTEDGAGRTQQ*GRRKFCSMDWK
Trigger: TTTCCAGTCCATGCTGCAGAACTTCCGACGCCCCAACTGCTGCGTCCGTCCTGCCCCGTCTTCTGTGTTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CAA 90 bp GACGGATCTGCTCTCGACACTCGCCACTGCCTGCACCTCCGCATCTaGCCAAGCCCTGCTGGGAACTTCCTTGATTTCACTTTCAGCTTG +
Preference number: 6 (lower is better)
Translates to: DGSALDTRHCLHLRI*PSPAGNFLDFTFSL
Trigger: CAAGCTGAAAGTGAAATCAAGGAAGTTCCCAGCAGGGCTTGGCAAGATGCGGAGGTGCAGGCAGTGGCGAGTGTCGAGAGCAGATCCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS TCA 72 bp ATGGAATTTCTCTTCAGGAGCACTCCAGAGCTCTCTTaGGTACTGGTCCCACTGGTGGGGGAGGGGAGCGCA +
Preference number: 6 (lower is better)
Translates to: MEFLFRSTPELS*VLVPLVGEGSA
Trigger: TGCGCTCCCCTCCCCCACCAGTGGGACCAGTACTCAAGAGAGCTCTGGAGTGCTCCTGAAGAGAAATTCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS GCA 72 bp AAGCCATTGGCATTCTTACACAGGAGAGCTGGTCGATaGCGAGGTGAGGCAGCCTGTGGCTCTCCTAGATCG +
Preference number: 6 (lower is better)
Translates to: KPLAFLHRRAGR*RGEAACGSPRS
Trigger: CGATCTAGGAGAGCCACAGGCTGCCTCACCTCGGCATCGACCAGCTCTCCTGTGTAAGAATGCCAATGGCTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS GCA 72 bp CTCTCGACACTCGCCACTGCCTGCACCTCCGCATCTTaGCAAGCCCTGCTGGGAACTTCCTTGATTTCACTT +
Preference number: 6 (lower is better)
Translates to: LSTLATACTSAS*QALLGTSLISL
Trigger: AAGTGAAATCAAGGAAGTTCCCAGCAGGGCTTGGCAAGATGCGGAGGTGCAGGCAGTGGCGAGTGTCGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS GCA 72 bp TCCAAGGATGCACCATACACTTCCCAGGTCATTCCCTaGTCATCCCACACGACGTCCCTGACACGCTTGGAC +
Preference number: 6 (lower is better)
Translates to: SKDAPYTSQVIP*SSHTTSLTRLD
Trigger: GTCCAAGCGTGTCAGGGACGTCGTGTGGGATGAGCAGGGAATGACCTGGGAAGTGTATGGTGCATCCTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS GCA 72 bp CTGGATCGCGATTCCCAGGGACTCTGCGTCCAAGGATaGACCATACACTTCCCAGGTCATTCCCTGCTCATC +
Preference number: 6 (lower is better)
Translates to: LDRDSQGLCVQG*TIHFPGHSLLI
Trigger: GATGAGCAGGGAATGACCTGGGAAGTGTATGGTGCATCCTTGGACGCAGAGTCCCTGGGAATCGCGATCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS GCA 72 bp ACACCAGGAGAAGACATATCTGGTTGGGTGGTCTCATaGTCACAAACCTGCATCAGGGCTTCGGCAGCTGCC +
Preference number: 6 (lower is better)
Translates to: TPGEDISGWVVS*SQTCIRASAAA
Trigger: GGCAGCTGCCGAAGCCCTGATGCAGGTTTGTGAGCATGAGACCACCCAACCAGATATGTCTTCTCCTGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CAA 90 bp TCCCACACGACGTCCCTGACACGCTTGGACTGTTTCAGCTGGAGCTaGGAGTCTGCGCCAAGCTGCTTTTTCTTATCTCCTGGAGTGAGT +
Preference number: 6 (lower is better)
Translates to: SHTTSLTRLDCFSWS*ESAPSCFFLSPGVS
Trigger: ACTCACTCCAGGAGATAAGAAAAAGCAGCTTGGCGCAGACTCCAAGCTCCAGCTGAAACAGTCCAAGCGTGTCAGGGACGTCGTGTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS TCA 72 bp TTGGTCATCGTACTGGCTTCTTTGAACCTTGACATCTaGCGCTGTGCTGGCAGCGGCACCTTCTCTGGACCT +
Preference number: 6 (lower is better)
Translates to: LVIVLASLNLDI*RCAGSGTFSGP
Trigger: AGGTCCAGAGAAGGTGCCGCTGCCAGCACAGCGTCAGATGTCAAGGTTCAAAGAAGCCAGTACGATGACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS TCA 72 bp AGCTTGGTTGGTCATCGTACTGGCTTCTTTGAACCTTaGCATCTGACGCTGTGCTGGCAGCGGCACCTTCTC +
Preference number: 6 (lower is better)
Translates to: SLVGHRTGFFEP*HLTLCWQRHLL
Trigger: GAGAAGGTGCCGCTGCCAGCACAGCGTCAGATGTCAAGGTTCAAAGAAGCCAGTACGATGACCAACCAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS TCA 72 bp AATGCTCAGGAGCACGGCTTTCCTTCAGAAATGCAGTaGGGATACTGGGGCTGGTGGAGACGGATCTGCTCT +
Preference number: 6 (lower is better)
Translates to: NAQEHGFPSEMQ*GYWGWWRRICS
Trigger: AGAGCAGATCCGTCTCCACCAGCCCCAGTATCCTCACTGCATTTCTGAAGGAAAGCCGTGCTCCTGAGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS TCA 72 bp AGAGCTCCAGTGTGTGGCTCCCACTGCTGTGGCAAATaGCACGCAGCTGCTCTTGTTCAAAATGCTCAGGAG +
Preference number: 6 (lower is better)
Translates to: RAPVCGSHCCGK*HAAALVQNAQE
Trigger: CTCCTGAGCATTTTGAACAAGAGCAGCTGCGTGTCATTTGCCACAGCAGTGGGAGCCACACACTGGAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CCA 72 bp AGTCACCCATGGGATCAGATGGCAGGCTCAGGCTGGTaGCTGTCTTGGTCTGTCTGTTTTCTTCTAAGGTGC +
Preference number: 6 (lower is better)
Translates to: SHPWDQMAGSGW*LSWSVCFLLRC
Trigger: GCACCTTAGAAGAAAACAGACAGACCAAGACAGCCACCAGCCTGAGCCTGCCATCTGATCCCATGGGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CCA 72 bp CACACGACGTCCCTGACACGCTTGGACTGTTTCAGCTaGAGCTTGGAGTCTGCGCCAAGCTGCTTTTTCTTA +
Preference number: 6 (lower is better)
Translates to: HTTSLTRLDCFS*SLESAPSCFFL
Trigger: TAAGAAAAAGCAGCTTGGCGCAGACTCCAAGCTCCAGCTGAAACAGTCCAAGCGTGTCAGGGACGTCGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS TCA 72 bp CACTTTCAGCTTGGTTGGTCATCGTACTGGCTTCTTTaGACCTTGACATCTGACGCTGTGCTGGCAGCGGCA +
Preference number: 6 (lower is better)
Translates to: HFQLGWSSYWLL*TLTSDAVLAAA
Trigger: TGCCGCTGCCAGCACAGCGTCAGATGTCAAGGTTCAAAGAAGCCAGTACGATGACCAACCAAGCTGAAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS GCA 72 bp TTACAGGACCTCATTTCAGAGTCACAGATGGCTCCCTaGCTTTCCCCTTCAGGTCCACCTACAGGAGAGGAT +
Preference number: 6 (lower is better)
Translates to: LQDLISESQMAP*LSPSGPPTGED
Trigger: ATCCTCTCCTGTAGGTGGACCTGAAGGGGAAAGGCAGGGAGCCATCTGTGACTCTGAAATGAGGTCCTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS GCA 72 bp TTGCAAATGGTTCTGGATCGCGATTCCCAGGGACTCTaGGTCCAAGGATGCACCATACACTTCCCAGGTCAT +
Preference number: 6 (lower is better)
Translates to: LQMVLDRDSQGL*VQGCTIHFPGH
Trigger: ATGACCTGGGAAGTGTATGGTGCATCCTTGGACGCAGAGTCCCTGGGAATCGCGATCCAGAACCATTTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CAA 72 bp ACGTCCCTGACACGCTTGGACTGTTTCAGCTGGAGCTaGGAGTCTGCGCCAAGCTGCTTTTTCTTATCTCCT +
Preference number: 6 (lower is better)
Translates to: TSLTRLDCFSWS*ESAPSCFFLSP
Trigger: AGGAGATAAGAAAAAGCAGCTTGGCGCAGACTCCAAGCTCCAGCTGAAACAGTCCAAGCGTGTCAGGGACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CAA 90 bp ACTGCCTGCACCTCCGCATCTTGCCAAGCCCTGCTGGGAACTTCCTaGATTTCACTTTCAGCTTGGTTGGTCATCGTACTGGCTTCTTTG +
Preference number: 6 (lower is better)
Translates to: TACTSASCQALLGTS*ISLSAWLVIVLASL
Trigger: CAAAGAAGCCAGTACGATGACCAACCAAGCTGAAAGTGAAATCAAGGAAGTTCCCAGCAGGGCTTGGCAAGATGCGGAGGTGCAGGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CAA 90 bp TGCTTTCTGCACTTCATTGAACACACCAGGAGAAGACATATCTGGTaGGGTGGTCTCATGCTCACAAACCTGCATCAGGGCTTCGGCAGC +
Preference number: 6 (lower is better)
Translates to: CFLHFIEHTRRRHIW*GGLMLTNLHQGFGS
Trigger: GCTGCCGAAGCCCTGATGCAGGTTTGTGAGCATGAGACCACCCAACCAGATATGTCTTCTCCTGGTGTGTTCAATGAAGTGCAGAAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS TCA 72 bp AGTCTGCGCCAAGCTGCTTTTTCTTATCTCCTGGAGTaGGTCCTACCTGAGCAGCAGCTGCTGTCACATTTA +
Preference number: 6 (lower is better)
Translates to: SLRQAAFSYLLE*VLPEQQLLSHL
Trigger: TAAATGTGACAGCAGCTGCTGCTCAGGTAGGACTCACTCCAGGAGATAAGAAAAAGCAGCTTGGCGCAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS GCA 72 bp CTGTGGCAAATGACACGCAGCTGCTCTTGTTCAAAATaGTCAGGAGCACGGCTTTCCTTCAGAAATGCAGTG +
Preference number: 6 (lower is better)
Translates to: LWQMTRSCSCSK*SGARLSFRNAV
Trigger: CACTGCATTTCTGAAGGAAAGCCGTGCTCCTGAGCATTTTGAACAAGAGCAGCTGCGTGTCATTTGCCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CAA 72 bp CACTTCATTGAACACACCAGGAGAAGACATATCTGGTaGGGTGGTCTCATGCTCACAAACCTGCATCAGGGC +
Preference number: 6 (lower is better)
Translates to: HFIEHTRRRHIW*GGLMLTNLHQG
Trigger: GCCCTGATGCAGGTTTGTGAGCATGAGACCACCCAACCAGATATGTCTTCTCCTGGTGTGTTCAATGAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CCA 72 bp CTGCACTTCATTGAACACACCAGGAGAAGACATATCTaGTTGGGTGGTCTCATGCTCACAAACCTGCATCAG +
Preference number: 6 (lower is better)
Translates to: LHFIEHTRRRHI*LGGLMLTNLHQ
Trigger: CTGATGCAGGTTTGTGAGCATGAGACCACCCAACCAGATATGTCTTCTCCTGGTGTGTTCAATGAAGTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CCA 72 bp GCCCTGCTGGGAACTTCCTTGATTTCACTTTCAGCTTaGTTGGTCATCGTACTGGCTTCTTTGAACCTTGAC +
Preference number: 6 (lower is better)
Translates to: ALLGTSLISLSA*LVIVLASLNLD
Trigger: GTCAAGGTTCAAAGAAGCCAGTACGATGACCAACCAAGCTGAAAGTGAAATCAAGGAAGTTCCCAGCAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CAA 72 bp GGAGAGTTGAATGTGGCAGGTGCTTTCTGCACTTCATaGAACACACCAGGAGAAGACATATCTGGTTGGGTG +
Preference number: 6 (lower is better)
Translates to: GELNVAGAFCTS*NTPGEDISGWV
Trigger: CACCCAACCAGATATGTCTTCTCCTGGTGTGTTCAATGAAGTGCAGAAAGCACCTGCCACATTCAACTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CAA 72 bp GCTGATTCTGTGCCTCCACTTTCTTGGGATTTAGGATaGAGCAGTAGGGTTTTGGCATCCGAGGTATCAGTG +
Preference number: 6 (lower is better)
Translates to: ADSVPPLSWDLG*SSRVLASEVSV
Trigger: CACTGATACCTCGGATGCCAAAACCCTACTGCTCAATCCTAAATCCCAAGAAAGTGGAGGCACAGAATCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CAA 90 bp CTGATAGAGCCACAAGAGTCAGATAGTTTGCAATCTGGGTCTGTTTaGTGGCCGTTTGTCGTTTTCTCTGCAAACTCAGATGGCCTGGTT +
Preference number: 6 (lower is better)
Translates to: LIEPQESDSLQSGSV*WPFVVFSANSDGLV
Trigger: AACCAGGCCATCTGAGTTTGCAGAGAAAACGACAAACGGCCACAAAACAGACCCAGATTGCAAACTATCTGACTCTTGTGGCTCTATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS TCA 72 bp AGCTGCTTTTTCTTATCTCCTGGAGTGAGTCCTACCTaGGCAGCAGCTGCTGTCACATTTAACTTTTGCTCC +
Preference number: 6 (lower is better)
Translates to: SCFFLSPGVSPT*AAAAVTFNFCS
Trigger: GGAGCAAAAGTTAAATGTGACAGCAGCTGCTGCTCAGGTAGGACTCACTCCAGGAGATAAGAAAAAGCAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS TCA 72 bp GCATCTCCTTTATTAGTGGGATCCAAGCTCCCAGAATaGTCAGCTTTGCTGATAGAGCCACAAGAGTCAGAT +
Preference number: 6 (lower is better)
Translates to: ASPLLVGSKLPE*SALLIEPQESD
Trigger: ATCTGACTCTTGTGGCTCTATCAGCAAAGCTGATCATTCTGGGAGCTTGGATCCCACTAATAAAGGAGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS GCA 72 bp CGGAAGTTCTGCAGCATGGACTGGAAAACACTGTGCTaGCTTCCTCTGAGCTTCTTATTTGAAGAAGTATCT +
Preference number: 6 (lower is better)
Translates to: RKFCSMDWKTLC*LPLSFLFEEVS
Trigger: AGATACTTCTTCAAATAAGAAGCTCAGAGGAAGGCAGCACAGTGTTTTCCAGTCCATGCTGCAGAACTTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CCA 72 bp CAAGAGTCAGATAGTTTGCAATCTGGGTCTGTTTTGTaGCCGTTTGTCGTTTTCTCTGCAAACTCAGATGGC +
Preference number: 6 (lower is better)
Translates to: QESDSLQSGSVL*PFVVFSANSDG
Trigger: GCCATCTGAGTTTGCAGAGAAAACGACAAACGGCCACAAAACAGACCCAGATTGCAAACTATCTGACTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CAA 72 bp CTGCTGGGAACTTCCTTGATTTCACTTTCAGCTTGGTaGGTCATCGTACTGGCTTCTTTGAACCTTGACATC +
Preference number: 6 (lower is better)
Translates to: LLGTSLISLSAW*VIVLASLNLDI
Trigger: GATGTCAAGGTTCAAAGAAGCCAGTACGATGACCAACCAAGCTGAAAGTGAAATCAAGGAAGTTCCCAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CAA 72 bp CAGATAGTTTGCAATCTGGGTCTGTTTTGTGGCCGTTaGTCGTTTTCTCTGCAAACTCAGATGGCCTGGTTT +
Preference number: 6 (lower is better)
Translates to: QIVCNLGLFCGR*SFSLQTQMAWF
Trigger: AAACCAGGCCATCTGAGTTTGCAGAGAAAACGACAAACGGCCACAAAACAGACCCAGATTGCAAACTATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CAA 72 bp TCAGCTTTGCTGATAGAGCCACAAGAGTCAGATAGTTaGCAATCTGGGTCTGTTTTGTGGCCGTTTGTCGTT +
Preference number: 6 (lower is better)
Translates to: SALLIEPQESDS*QSGSVLWPFVV
Trigger: AACGACAAACGGCCACAAAACAGACCCAGATTGCAAACTATCTGACTCTTGTGGCTCTATCAGCAAAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CAA 72 bp CCACTTTCTTGGGATTTAGGATTGAGCAGTAGGGTTTaGGCATCCGAGGTATCAGTGCCAGTAGACTCTTTT +
Preference number: 6 (lower is better)
Translates to: PLSWDLGLSSRV*ASEVSVPVDSF
Trigger: AAAAGAGTCTACTGGCACTGATACCTCGGATGCCAAAACCCTACTGCTCAATCCTAAATCCCAAGAAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CAA 90 bp CACAAGAGTCAGATAGTTTGCAATCTGGGTCTGTTTTGTGGCCGTTaGTCGTTTTCTCTGCAAACTCAGATGGCCTGGTTTCAAATTTCC +
Preference number: 6 (lower is better)
Translates to: HKSQIVCNLGLFCGR*SFSLQTQMAWFQIS
Trigger: GGAAATTTGAAACCAGGCCATCTGAGTTTGCAGAGAAAACGACAAACGGCCACAAAACAGACCCAGATTGCAAACTATCTGACTCTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CAA 90 bp TCTGTGCCTCCACTTTCTTGGGATTTAGGATTGAGCAGTAGGGTTTaGGCATCCGAGGTATCAGTGCCAGTAGACTCTTTTTCTTTTACT +
Preference number: 6 (lower is better)
Translates to: SVPPLSWDLGLSSRV*ASEVSVPVDSFSFT
Trigger: AGTAAAAGAAAAAGAGTCTACTGGCACTGATACCTCGGATGCCAAAACCCTACTGCTCAATCCTAAATCCCAAGAAAGTGGAGGCACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CAA 72 bp CCACAAGAGTCAGATAGTTTGCAATCTGGGTCTGTTTaGTGGCCGTTTGTCGTTTTCTCTGCAAACTCAGAT +
Preference number: 6 (lower is better)
Translates to: PQESDSLQSGSV*WPFVVFSANSD
Trigger: ATCTGAGTTTGCAGAGAAAACGACAAACGGCCACAAAACAGACCCAGATTGCAAACTATCTGACTCTTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS CAA 90 bp AGATGGCCTGGTTTCAAATTTCCCCAATCCATAACTTGTTTCAGCTaGACTGCATGCACTGATAGAAATCTGGTCAATGGCGGTAGCTTT +
Preference number: 6 (lower is better)
Translates to: RWPGFKFPQSITCFS*TACTDRNLVNGGSF
Trigger: AAAGCTACCGCCATTGACCAGATTTCTATCAGTGCATGCAGTCAAGCTGAAACAAGTTATGGATTGGGGAAATTTGAAACCAGGCCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333209.4
ENST00000609438.2
CDS TCA 72 bp AAATGTAATCTAGAGACAGGTGAGCTAGGCTTTTTCTaGGATGGTAGAAACACTGTAAGAGAAAACAAACAT +
Preference number: 6 (lower is better)
Translates to: KCNLETGELGFF*DGRNTVRENKH
Trigger: ATGTTTGTTTTCTCTTACAGTGTTTCTACCATCTCAGAAAAAGCCTAGCTCACCTGTCTCTAGATTACATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333209.4
CDS TCA 72 bp AGGGATAGATCCAAATATAAATGGGGACTTAATCTATaGCAAAAGAAGTATTACAATTTGGTGGTGAAAGGC +
Preference number: 6 (lower is better)
Translates to: RDRSKYKWGLNL*QKKYYNLVVKG
Trigger: GCCTTTCACCACCAAATTGTAATACTTCTTTTGTCATAGATTAAGTCCCCATTTATATTTGGATCTATCCCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333209.4