RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPRC5B (Homo sapiens)

Ensembl gene IDs: ENSG00000167191

Ensembl transcript IDs: ENST00000300571.7, ENST00000535671.5, ENST00000562348.1, ENST00000562469.5, ENST00000564449.1, ENST00000566822.1, ENST00000568214.1, ENST00000569102.1, ENST00000569479.5, ENST00000569847.1, ENST00000570142.5

Found 435 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTGAAGCCCTGCTAGGTGACATCATCGCGGAAAACCTGCCGTGGTaGCTGCCTTCCAACCTGCCTCCCGGAGGGGCTTTCAGCTGGAGA +
Preference number: 1 (lower is better)
Translates to: PEALLGDIIAENLPW*LPSNLPPGGAFSWR
Trigger: TCTCCAGCTGAAAGCCCCTCCGGGAGGCAGGTTGGAAGGCAGGCACCACGGCAGGTTTTCCGCGATGATGTCACCTAGCAGGGCTTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR GCA 90 bp AGGACCCGAGGTGTCACTGCTTGTGAGGCAGCGAGAGGTCATCTCTaGATCCTAGTGGGAACCCCTGAAGCCCTGCTAGGTGACATCATC +
Preference number: 1 (lower is better)
Translates to: RTRGVTACEAARGHL*ILVGTPEALLGDII
Trigger: GATGATGTCACCTAGCAGGGCTTCAGGGGTTCCCACTAGGATGCAGAGATGACCTCTCGCTGCCTCACAAGCAGTGACACCTCGGGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR CCA 90 bp CTCCCTTTCAACTTGGGGTTTGGCCTGAGGCGTTCAACTCAGCCTTaGCCAACCGAGACCACCACCCGAGTTCACCCTTGTTCAGTGGGT +
Preference number: 1 (lower is better)
Translates to: LPFNLGFGLRRSTQP*PTETTTRVHPCSVG
Trigger: ACCCACTGAACAAGGGTGAACTCGGGTGGTGGTCTCGGTTGGCCAAGGCTGAGTTGAACGCCTCAGGCCAAACCCCAAGTTGAAAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR CCA 90 bp GTCCCTCCACCTCTACTGGCTATAAAGCTCACCCCACGATTCAGTTaGGCCTCACCTTGGAATCCCACCCACAACCTCCTTAACTCTCCT +
Preference number: 1 (lower is better)
Translates to: VPPPLLAIKLTPRFS*ASPWNPTHNLLNSP
Trigger: AGGAGAGTTAAGGAGGTTGTGGGTGGGATTCCAAGGTGAGGCCCAACTGAATCGTGGGGTGAGCTTTATAGCCAGTAGAGGTGGAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR CCA 90 bp TCATTGGATTATAAAAGCCACAATGCTCCCTTTCAACTTGGGGTTTaGCCTGAGGCGTTCAACTCAGCCTTGGCCAACCGAGACCACCAC +
Preference number: 1 (lower is better)
Translates to: SLDYKSHNAPFQLGV*PEAFNSALANRDHH
Trigger: GTGGTGGTCTCGGTTGGCCAAGGCTGAGTTGAACGCCTCAGGCCAAACCCCAAGTTGAAAGGGAGCATTGTGGCTTTTATAATCCAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR CCA 90 bp TTAAATGAGGCTTCCCATGGCTCAAAGATGGCTCTGTTCTTATGCTaGGGAAGCACGACTTTCCATGGCAGCCATTTGTGCTGTGCTCAC +
Preference number: 1 (lower is better)
Translates to: LNEASHGSKMALFLC*GSTTFHGSHLCCAH
Trigger: GTGAGCACAGCACAAATGGCTGCCATGGAAAGTCGTGCTTCCCCAGCATAAGAACAGAGCCATCTTTGAGCCATGGGAAGCCTCATTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR GCA 90 bp TCATTAAATGAGGCTTCCCATGGCTCAAAGATGGCTCTGTTCTTATaGTGGGGAAGCACGACTTTCCATGGCAGCCATTTGTGCTGTGCT +
Preference number: 1 (lower is better)
Translates to: SLNEASHGSKMALFL*WGSTTFHGSHLCCA
Trigger: AGCACAGCACAAATGGCTGCCATGGAAAGTCGTGCTTCCCCAGCATAAGAACAGAGCCATCTTTGAGCCATGGGAAGCCTCATTTAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR GCA 90 bp AAACTCTGCTTTGAATCGATGCTAGAGGTTATGCTGGCCAAACAGTaGAGAGAACATGGGGGCTTTGAATGGCCGAGATGTTCGAAATGC +
Preference number: 1 (lower is better)
Translates to: KLCFESMLEVMLAKQ*REHGGFEWPRCSKC
Trigger: GCATTTCGAACATCTCGGCCATTCAAAGCCCCCATGTTCTCTGCACTGTTTGGCCAGCATAACCTCTAGCATCGATTCAAAGCAGAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR GCA 90 bp GGACCCACCCTCATTTATACATTCCATGCCGTCAGGTTAAAACTCTaGTTTGAATCGATGCTAGAGGTTATGCTGGCCAAACAGTGCAGA +
Preference number: 1 (lower is better)
Translates to: GPTLIYTFHAVRLKL*FESMLEVMLAKQCR
Trigger: TCTGCACTGTTTGGCCAGCATAACCTCTAGCATCGATTCAAAGCAGAGTTTTAACCTGACGGCATGGAATGTATAAATGAGGGTGGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR TCA 90 bp GCTAGAGGTTATGCTGGCCAAACAGTGCAGAGAACATGGGGGCTTTaGATGGCCGAGATGTTCGAAATGCTAAATAACAAAGGAATGACT +
Preference number: 1 (lower is better)
Translates to: ARGYAGQTVQRTWGL*MAEMFEMLNNKGMT
Trigger: AGTCATTCCTTTGTTATTTAGCATTTCGAACATCTCGGCCATTCAAAGCCCCCATGTTCTCTGCACTGTTTGGCCAGCATAACCTCTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR TCA 90 bp ACAATAAAGAACTTAGAAAACGAACGTGTGAATTGCTCCATCGTGTaGATGGTATCAGAAAGCTCCAAAGGACTCCAGAGAGCGGGGGTG +
Preference number: 1 (lower is better)
Translates to: TIKNLENERVNCSIV*MVSESSKGLQRAGV
Trigger: CACCCCCGCTCTCTGGAGTCCTTTGGAGCTTTCTGATACCATTCACACGATGGAGCAATTCACACGTTCGTTTTCTAAGTTCTTTATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR CCA 90 bp GCACCTGCTGAGAACTCCTGTAAGCTGGTATCATCATTGCATCATTaGATTATAAAAGCCACAATGCTCCCTTTCAACTTGGGGTTTGGC +
Preference number: 1 (lower is better)
Translates to: APAENSCKLVSSLHH*IIKATMLPFNLGFG
Trigger: GCCAAACCCCAAGTTGAAAGGGAGCATTGTGGCTTTTATAATCCAATGATGCAATGATGATACCAGCTTACAGGAGTTCTCAGCAGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR TCA 90 bp CACCCTCATTTATACATTCCATGCCGTCAGGTTAAAACTCTGCTTTaGATCGATGCTAGAGGTTATGCTGGCCAAACAGTGCAGAGAACA +
Preference number: 1 (lower is better)
Translates to: HPHLYIPCRQVKTLL*IDARGYAGQTVQRT
Trigger: TGTTCTCTGCACTGTTTGGCCAGCATAACCTCTAGCATCGATTCAAAGCAGAGTTTTAACCTGACGGCATGGAATGTATAAATGAGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR GCA 90 bp AGCACGACTTTCCATGGCAGCCATTTGTGCTGTGCTCACCTTATATaGTTGGACAATAAAGAACTTAGAAAACGAACGTGTGAATTGCTC +
Preference number: 1 (lower is better)
Translates to: STTFHGSHLCCAHLI*LDNKELRKRTCELL
Trigger: GAGCAATTCACACGTTCGTTTTCTAAGTTCTTTATTGTCCAAGCATATAAGGTGAGCACAGCACAAATGGCTGCCATGGAAAGTCGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR GCA 90 bp CTGTTCTTATGCTGGGGAAGCACGACTTTCCATGGCAGCCATTTGTaGTGTGCTCACCTTATATGCTTGGACAATAAAGAACTTAGAAAA +
Preference number: 1 (lower is better)
Translates to: LFLCWGSTTFHGSHL*CAHLICLDNKELRK
Trigger: TTTTCTAAGTTCTTTATTGTCCAAGCATATAAGGTGAGCACAGCACAAATGGCTGCCATGGAAAGTCGTGCTTCCCCAGCATAAGAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR CCA 90 bp CGACTTTCCATGGCAGCCATTTGTGCTGTGCTCACCTTATATGCTTaGACAATAAAGAACTTAGAAAACGAACGTGTGAATTGCTCCATC +
Preference number: 1 (lower is better)
Translates to: RLSMAAICAVLTLYA*TIKNLENERVNCSI
Trigger: GATGGAGCAATTCACACGTTCGTTTTCTAAGTTCTTTATTGTCCAAGCATATAAGGTGAGCACAGCACAAATGGCTGCCATGGAAAGTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR GCA 90 bp ATACTTAATGATCATTTCCAAAGGAGACCACTCCTTAACTTTTACTaGAAACCCAACAAGATGAGACACTTAAACCCAGACAGATGTAAC +
Preference number: 1 (lower is better)
Translates to: ILNDHFQRRPLLNFY*KPNKMRHLNPDRCN
Trigger: GTTACATCTGTCTGGGTTTAAGTGTCTCATCTTGTTGGGTTTGCAGTAAAAGTTAAGGAGTGGTCTCCTTTGGAAATGATCATTAAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR-3UTR TCA 90 bp GGTGCCTGCCTTCCAACCTGCCTCCCGGAGGGGCTTTCAGCTGGAGACCCCATTCTGGCCCACCAGCTGTaGATTTGGTTCTGTTCTACC +
Preference number: 2 (lower is better)
Translates to: GACLPTCLPEGLSAGDPILAHQL*IWFCST
Trigger: GGTAGAACAGAACCAAATTCACAGCTGGTGGGCCAG...AATGGGGTCTCCAGCTGAAAGCCCCTCCGGGAGGCAGGTTGGAAGGCAGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR-3UTR GCA 90 bp TCTTATGCTGGGGAAGCACGACTTTCCATGGCAGCCATTTGTGCTGTGCTCACCTGGGCAGAGGCGGGGTaGTTCCGGGGAGGTCAGGTG +
Preference number: 2 (lower is better)
Translates to: SYAGEARLSMAAICAVLTWAEAG*FRGGQV
Trigger: CACCTGACCTCCCCGGAAGCACCCCGCCTCTGCCCA...GGTGAGCACAGCACAAATGGCTGCCATGGAAAGTCGTGCTTCCCCAGCATAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR-3UTR CCA 90 bp GCAGCGAGAGGTCATCTCTGCATCCTAGTGGGAACCCCTGAAGCCCTGCTAGGTGGCTGTGAGGCGGCCTaGTTCGGCAACTGTTACCGA +
Preference number: 2 (lower is better)
Translates to: AARGHLCILVGTPEALLGGCEAA*FGNCYR
Trigger: TCGGTAACAGTTGCCGAACCAGGCCGCCTCACAGCC...ACCTAGCAGGGCTTCAGGGGTTCCCACTAGGATGCAGAGATGACCTCTCGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR CAA 90 bp GCTCCCTTTCAACTTGGGGTTTGGCCTGAGGCGTTCAACTCAGCCTaGGCCAACCGAGACCACCACCCGAGTTCACCCTTGTTCAGTGGG +
Preference number: 2 (lower is better)
Translates to: APFQLGVWPEAFNSA*ANRDHHPSSPLFSG
Trigger: CCCACTGAACAAGGGTGAACTCGGGTGGTGGTCTCGGTTGGCCAAGGCTGAGTTGAACGCCTCAGGCCAAACCCCAAGTTGAAAGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR-3UTR CCA 90 bp GGTGTCACTGCTTGTGAGGCAGCGAGAGGTCATCTCTGCATCCTAGTGGGAACCGCGGAAAACCTGCCGTaGTGCCTGCCTTCCAACCTG +
Preference number: 2 (lower is better)
Translates to: GVTACEAARGHLCILVGTAENLP*CLPSNL
Trigger: CAGGTTGGAAGGCAGGCACCACGGCAGGTTTTCCGC...GGTTCCCACTAGGATGCAGAGATGACCTCTCGCTGCCTCACAAGCAGTGACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR-3UTR CCA 90 bp CTATGGCTCTACAAGGGAAGGGGCGGGGCCTGTGTTCTCACCATAGACACTAGACTCCAAGAGGCTACCTaGGGTCCAGCACTTGCTGGG +
Preference number: 2 (lower is better)
Translates to: LWLYKGRGGACVLTIDTRLQEAT*GPALAG
Trigger: CCCAGCAAGTGCTGGACCCCAGGTAGCCTCTTGGAG...TCTAGTGTCTATGGTGAGAACACAGGCCCCGCCCCTTCCCTTGTAGAGCCATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR-3UTR CCA 90 bp GGAAAACTCGAAGGCGGGTCACACAGGGAGGGCCAGATTGGCCTTACTTTCCCCAGTTGGGCCTCACCTTaGAATCCCACCCACAACCTC +
Preference number: 2 (lower is better)
Translates to: GKLEGGSHREGQIGLTFPSWASP*NPTHNL
Trigger: GAGGTTGTGGGTGGGATTCCAAGGTGAGGCCCAACT...GGGGAAAGTAAGGCCAATCTGGCCCTCCCTGTGTGACCCGCCTTCGAGTTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR CAA 90 bp CTGAAATGTGCAAACCACCAGGCAAGCCGGTGGCAAAGTCCCCATTaGTCCTCAACGCAACGGTCATCTCCAAGAGGCTACCTGGGGTCC +
Preference number: 2 (lower is better)
Translates to: LKCANHQASRWQSPH*SSTQRSSPRGYLGS
Trigger: GGACCCCAGGTAGCCTCTTGGAGATGACCGTTGCGTTGAGGACAAATGGGGACTTTGCCACCGGCTTGCCTGGTGGTTTGCACATTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR-3UTR GCA 90 bp GAAACATACTCAGCTCAGACGTACTGGCTTATGAAGCGGTCAGTCCTCCCCCGGTCATCGCGGAAAACCTaGCGTGGTGCCTGCCTTCCA +
Preference number: 2 (lower is better)
Translates to: ETYSAQTYWLMKRSVLPRSSRKT*RGACLP
Trigger: TGGAAGGCAGGCACCACGGCAGGTTTTCCGCGATGA...CCGGGGGAGGACTGACCGCTTCATAAGCCAGTACGTCTGAGCTGAGTATGTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR-3UTR CCA 90 bp TGGCTCTACAAGGGAAGGGGCGGGGCCTGTGTTCTCACCATAGACACTAGAGCAAGTTGGGCCTCACCTTaGAATCCCACCCACAACCTC +
Preference number: 2 (lower is better)
Translates to: WLYKGRGGACVLTIDTRASWASP*NPTHNL
Trigger: GAGGTTGTGGGTGGGATTCCAAGGTGAGGCCCAACT...TGCTCTAGTGTCTATGGTGAGAACACAGGCCCCGCCCCTTCCCTTGTAGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR-3UTR CCA 90 bp CTATGGCTCTACAAGGGAAGGGGCGGGGCCTGTGTTCTCACCATAGACACTAGAGGGTCCAGCACTTGCTaGGGAGAGGTGATAAGAGTG +
Preference number: 2 (lower is better)
Translates to: LWLYKGRGGACVLTIDTRGSSTC*GEVIRV
Trigger: CACTCTTATCACCTCTCCCCAGCAAGTGCTGGACCC...TCTAGTGTCTATGGTGAGAACACAGGCCCCGCCCCTTCCCTTGTAGAGCCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR-3UTR CCA 90 bp GCCTTCCAACCTGCCTCCCGGAGGGGCTTTCAGCTGGAGACCCCATTGGAGCTCAATTGGGAGAGGATTTaGAGATACACCCGTAAGTGT +
Preference number: 2 (lower is better)
Translates to: AFQPASRRGFQLETPLELNWERI*RYTRKC
Trigger: ACACTTACGGGTGTATCTCCAAATCCTCTCCCAATT...GAGCTCCAATGGGGTCTCCAGCTGAAAGCCCCTCCGGGAGGCAGGTTGGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR-3UTR TCA 90 bp GGACTGCTGCCCCAAGCCAGAATATTTCTATGGCTCTACAAGGGAAGGGGCGGGTTAGTTTGCGGGGATTaGGGTTGGTCTGGTATTACG +
Preference number: 2 (lower is better)
Translates to: GLLPQARIFLWLYKGRGGLVCGD*GWSGIT
Trigger: CGTAATACCAGACCAACCTCAATCCCCGCAAACTAA...CCCGCCCCTTCCCTTGTAGAGCCATAGAAATATTCTGGCTTGGGGCAGCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR-3UTR GCA 90 bp TCTTATGCTGGGGAAGCACGACTTTCCATGGCAGCCATTTGTGCTGTGCTCACCCCTTACTTTCCCCAGTaGTTTGCAAGGATGGGGTGG +
Preference number: 2 (lower is better)
Translates to: SYAGEARLSMAAICAVLTPYFPQ*FARMGW
Trigger: CCACCCCATCCTTGCAAAGCACTGGGGAAAGTAAGG...GGTGAGCACAGCACAAATGGCTGCCATGGAAAGTCGTGCTTCCCCAGCATAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR-3UTR GCA 90 bp TCTTATGCTGGGGAAGCACGACTTTCCATGGCAGCCATTTGTGCTGTGCTCACCATGCTGGCCAAACAGTaGAGAGAACATGGGGGCTTT +
Preference number: 2 (lower is better)
Translates to: SYAGEARLSMAAICAVLTMLAKQ*REHGGF
Trigger: AAAGCCCCCATGTTCTCTGCACTGTTTGGCCAGCAT...GGTGAGCACAGCACAAATGGCTGCCATGGAAAGTCGTGCTTCCCCAGCATAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR-3UTR CCA 90 bp TGGCTCTACAAGGGAAGGGGCGGGGCCTGTGTTCTCACCATAGACACTAGAGCAGGATTGAGGTTGGTCTaGTATTACGTGTCTGTGTGT +
Preference number: 2 (lower is better)
Translates to: WLYKGRGGACVLTIDTRAGLRLV*YYVSVC
Trigger: ACACACAGACACGTAATACCAGACCAACCTCAATCC...TGCTCTAGTGTCTATGGTGAGAACACAGGCCCCGCCCCTTCCCTTGTAGAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR-3UTR GCA 90 bp GAAACATACTCAGCTCAGACGTACTGGCTTATGAAGCGGTCAGTCCTCCCCCGGAACAAAGGAATGACTTaGTCAGGACAGATGGAAACC +
Preference number: 2 (lower is better)
Translates to: ETYSAQTYWLMKRSVLPRNKGMT*SGQMET
Trigger: GGTTTCCATCTGTCCTGAGCAAGTCATTCCTTTGTT...CCGGGGGAGGACTGACCGCTTCATAAGCCAGTACGTCTGAGCTGAGTATGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR-3UTR CCA 90 bp GGACTGCTGCCCCAAGCCAGAATATTTCTATGGCTCTACAAGGGAAGGGGCGGGTACACGAAATCCCCTTaGCTAGGATTTCCAAATTTC +
Preference number: 2 (lower is better)
Translates to: GLLPQARIFLWLYKGRGGYTKSP*LGFPNF
Trigger: GAAATTTGGAAATCCTAGCCAAGGGGATTTCGTGTA...CCCGCCCCTTCCCTTGTAGAGCCATAGAAATATTCTGGCTTGGGGCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR CAA 90 bp TCATTGCATCATTGGATTATAAAAGCCACAATGCTCCCTTTCAACTaGGGGTTTGGCCTGAGGCGTTCAACTCAGCCTTGGCCAACCGAG +
Preference number: 2 (lower is better)
Translates to: SLHHWIIKATMLPFN*GFGLRRSTQPWPTE
Trigger: CTCGGTTGGCCAAGGCTGAGTTGAACGCCTCAGGCCAAACCCCAAGTTGAAAGGGAGCATTGTGGCTTTTATAATCCAATGATGCAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR-3UTR CCA 90 bp AGCAACAAGAAACCCTCATGTGATCCATTCCATCCAGGAATTTTCACCATAGCAGGAGGGGCTTTCAGCTaGAGACCCCATTGGAGCTCT +
Preference number: 2 (lower is better)
Translates to: SNKKPSCDPFHPGIFTIAGGAFS*RPHWSS
Trigger: AGAGCTCCAATGGGGTCTCCAGCTGAAAGCCCCTCC...TGCTATGGTGAAAATTCCTGGATGGAATGGATCACATGAGGGTTTCTTGTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR CAA 90 bp GTTAGCTTTTCAGTTCGTCAGTGTTCACATTTACACGAAATCCCCTaGGCTAGGATTTCCAAATTTCCTGGCTGTGAGGCGGCCTGGTTC +
Preference number: 2 (lower is better)
Translates to: VSFSVRQCSHLHEIP*ARISKFPGCEAAWF
Trigger: GAACCAGGCCGCCTCACAGCCAGGAAATTTGGAAATCCTAGCCAAGGGGATTTCGTGTAAATGTGAACACTGACGAACTGAAAAGCTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR-3UTR GCA 90 bp TATAAAAGCCACAATGCTCCCTTTCAACTTGGGGTTTGGCCTGAGGCGTTCAACATGGCTCTGTTCTTATaGTGGGGAAGCACGACTTTC +
Preference number: 2 (lower is better)
Translates to: YKSHNAPFQLGVWPEAFNMALFL*WGSTTF
Trigger: GAAAGTCGTGCTTCCCCAGCATAAGAACAGAGCCAT...GTTGAACGCCTCAGGCCAAACCCCAAGTTGAAAGGGAGCATTGTGGCTTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR-3UTR CCA 90 bp AGCAACAAGAAACCCTCATGTGATCCATTCCATCCAGGAATTTTCACCATAGCAACCCCACGATTCAGTTaGGCCTCACCTTGGAATCCC +
Preference number: 2 (lower is better)
Translates to: SNKKPSCDPFHPGIFTIATPRFS*ASPWNP
Trigger: GGGATTCCAAGGTGAGGCCCAACTGAATCGTGGGGT...TGCTATGGTGAAAATTCCTGGATGGAATGGATCACATGAGGGTTTCTTGTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR-3UTR CCA 90 bp CTTTCCATGGCAGCCATTTGTGCTGTGCTCACCTTATATGCTTGGACAATAAAGCAACCAACACCAGTCTaGCCCACCAGCTGTGAATTT +
Preference number: 2 (lower is better)
Translates to: LSMAAICAVLTLYAWTIKQPTPV*PTSCEF
Trigger: AAATTCACAGCTGGTGGGCCAGACTGGTGTTGGTTG...CTTTATTGTCCAAGCATATAAGGTGAGCACAGCACAAATGGCTGCCATGGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR CAA 90 bp GCTCTGTTCTTATGCTGGGGAAGCACGACTTTCCATGGCAGCCATTaGTGCTGTGCTCACCTTATATGCTTGGACAATAAAGAACTTAGA +
Preference number: 2 (lower is better)
Translates to: ALFLCWGSTTFHGSH*CCAHLICLDNKELR
Trigger: TCTAAGTTCTTTATTGTCCAAGCATATAAGGTGAGCACAGCACAAATGGCTGCCATGGAAAGTCGTGCTTCCCCAGCATAAGAACAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR-3UTR TCA 90 bp AGACACTTAAACCCAGACAGATGTAACAAAGGATTTTTGTTGTCTAAGTCCCAAAGGTGTCACTGCTTGTaGGGCAGCGAGAGGTCATCT +
Preference number: 2 (lower is better)
Translates to: RHLNPDRCNKGFLLSKSQRCHCL*GSERSS
Trigger: AGATGACCTCTCGCTGCCTCACAAGCAGTGACACCT...TTGGGACTTAGACAACAAAAATCCTTTGTTACATCTGTCTGGGTTTAAGTGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR CAA 90 bp ACGACTTTCCATGGCAGCCATTTGTGCTGTGCTCACCTTATATGCTaGGACAATAAAGAACTTAGAAAACGAACGTGTGAATTGCTCCAT +
Preference number: 2 (lower is better)
Translates to: TTFHGSHLCCAHLIC*DNKELRKRTCELLH
Trigger: ATGGAGCAATTCACACGTTCGTTTTCTAAGTTCTTTATTGTCCAAGCATATAAGGTGAGCACAGCACAAATGGCTGCCATGGAAAGTCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR-3UTR TCA 90 bp AGCAACAAGAAACCCTCATGTGATCCATTCCATCCAGGAATTTTCACCATAGCAATCACTTTCCAAATGTaGTGGTCACTTCATCACCCA +
Preference number: 2 (lower is better)
Translates to: SNKKPSCDPFHPGIFTIAITFQM*WSLHHP
Trigger: TGGGTGATGAAGTGACCATCACATTTGGAAAGTGAT...TGCTATGGTGAAAATTCCTGGATGGAATGGATCACATGAGGGTTTCTTGTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR CAA 90 bp CTTATATGCTTGGACAATAAAGAACTTAGAAAACGAACGTGTGAATaGCTCCATCGTGTGAATGGTATCAGAAAGCTCCAAAGGACTCCA +
Preference number: 2 (lower is better)
Translates to: LICLDNKELRKRTCE*LHRVNGIRKLQRTP
Trigger: TGGAGTCCTTTGGAGCTTTCTGATACCATTCACACGATGGAGCAATTCACACGTTCGTTTTCTAAGTTCTTTATTGTCCAAGCATATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR-3UTR GCA 90 bp AGACACTTAAACCCAGACAGATGTAACAAAGGATTTTTGTTGTCTAAGTCCCAACAGCCATTTGTGCTGTaGTCACCTTATATGCTTGGA +
Preference number: 2 (lower is better)
Translates to: RHLNPDRCNKGFLLSKSQQPFVL*SPYMLG
Trigger: TCCAAGCATATAAGGTGAGCACAGCACAAATGGCTG...TTGGGACTTAGACAACAAAAATCCTTTGTTACATCTGTCTGGGTTTAAGTGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR CCA 72 bp GCCCTGCTAGGTGACATCATCGCGGAAAACCTGCCGTaGTGCCTGCCTTCCAACCTGCCTCCCGGAGGGGCT +
Preference number: 3 (lower is better)
Translates to: ALLGDIIAENLP*CLPSNLPPGGA
Trigger: AGCCCCTCCGGGAGGCAGGTTGGAAGGCAGGCACCACGGCAGGTTTTCCGCGATGATGTCACCTAGCAGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR CCA 72 bp ACTGGAACGGGATTCTCTAGAAGCAAGCACATGCTCTaGGCAGAGGCGGGGTGCTTCCGGGGAGGTCAGGTG +
Preference number: 3 (lower is better)
Translates to: TGTGFSRSKHML*AEAGCFRGGQV
Trigger: CACCTGACCTCCCCGGAAGCACCCCGCCTCTGCCCAGAGCATGTGCTTGCTTCTAGAGAATCCCGTTCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR GCA 72 bp GGTGTCACTGCTTGTGAGGCAGCGAGAGGTCATCTCTaGATCCTAGTGGGAACCCCTGAAGCCCTGCTAGGT +
Preference number: 3 (lower is better)
Translates to: GVTACEAARGHL*ILVGTPEALLG
Trigger: ACCTAGCAGGGCTTCAGGGGTTCCCACTAGGATGCAGAGATGACCTCTCGCTGCCTCACAAGCAGTGACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR CCA 72 bp AACTTGGGGTTTGGCCTGAGGCGTTCAACTCAGCCTTaGCCAACCGAGACCACCACCCGAGTTCACCCTTGT +
Preference number: 3 (lower is better)
Translates to: NLGFGLRRSTQP*PTETTTRVHPC
Trigger: ACAAGGGTGAACTCGGGTGGTGGTCTCGGTTGGCCAAGGCTGAGTTGAACGCCTCAGGCCAAACCCCAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR CCA 72 bp AAAACTCGAAGGCGGGTCACACAGGGAGGGCCAGATTaGCCTTACTTTCCCCAGTGCTTTGCAAGGATGGGG +
Preference number: 3 (lower is better)
Translates to: KTRRRVTQGGPD*PYFPQCFARMG
Trigger: CCCCATCCTTGCAAAGCACTGGGGAAAGTAAGGCCAATCTGGCCCTCCCTGTGTGACCCGCCTTCGAGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR TCA 72 bp TGGAGATACACCCGTAAGTGTAGGAACAGGGCGAGATaGTCAAGGGAAGAAGGGACTGCTGCCCCAAGCCAG +
Preference number: 3 (lower is better)
Translates to: WRYTRKCRNRAR*SREEGTAAPSQ
Trigger: CTGGCTTGGGGCAGCAGTCCCTTCTTCCCTTGATCATCTCGCCCTGTTCCTACACTTACGGGTGTATCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR TCA 72 bp AAGCCACAATGCTCCCTTTCAACTTGGGGTTTGGCCTaGGGCGTTCAACTCAGCCTTGGCCAACCGAGACCA +
Preference number: 3 (lower is better)
Translates to: KPQCSLSTWGLA*GVQLSLGQPRP
Trigger: TGGTCTCGGTTGGCCAAGGCTGAGTTGAACGCCTCAGGCCAAACCCCAAGTTGAAAGGGAGCATTGTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR-3UTR CAA 90 bp CTATGGCTCTACAAGGGAAGGGGCGGGGCCTGTGTTCTCACCATAGACACTAGATGGCAAAGTCCCCATTaGTCCTCAACGCAACGGTCA +
Preference number: 3 (lower is better)
Translates to: LWLYKGRGGACVLTIDTRWQSPH*SSTQRS
Trigger: TGACCGTTGCGTTGAGGACAAATGGGGACTTTGCCA...TCTAGTGTCTATGGTGAGAACACAGGCCCCGCCCCTTCCCTTGTAGAGCCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR-3UTR CAA 90 bp TCCATTCCATCCAGGAATTTTCACCATAGCAACGGAAAGGACCCGAGGTGTCACCAGAGGGCCTCTTCTTaGGCACATGCCAGGGTCCCT +
Preference number: 3 (lower is better)
Translates to: SIPSRNFHHSNGKDPRCHQRASS*AHARVP
Trigger: AGGGACCCTGGCATGTGCCAAAGAAGAGGCCCTCTG...GTGACACCTCGGGTCCTTTCCGTTGCTATGGTGAAAATTCCTGGATGGAATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR TCA 72 bp CCCTCCCCAGGACTCTTACGTTTTCTGTCCACGCAATaGCTGGAACGGGATTCTCTAGAAGCAAGCACATGC +
Preference number: 3 (lower is better)
Translates to: PSPGLLRFLSTQ*LERDSLEASTC
Trigger: GCATGTGCTTGCTTCTAGAGAATCCCGTTCCAGTCATTGCGTGGACAGAAAACGTAAGAGTCCTGGGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR GCA 72 bp GAGGCTTCCCATGGCTCAAAGATGGCTCTGTTCTTATaGTGGGGAAGCACGACTTTCCATGGCAGCCATTTG +
Preference number: 3 (lower is better)
Translates to: EASHGSKMALFL*WGSTTFHGSHL
Trigger: CAAATGGCTGCCATGGAAAGTCGTGCTTCCCCAGCATAAGAACAGAGCCATCTTTGAGCCATGGGAAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR CCA 72 bp ATAAAGCTCACCCCACGATTCAGTTGGGCCTCACCTTaGAATCCCACCCACAACCTCCTTAACTCTCCTGAC +
Preference number: 3 (lower is better)
Translates to: IKLTPRFSWASP*NPTHNLLNSPD
Trigger: GTCAGGAGAGTTAAGGAGGTTGTGGGTGGGATTCCAAGGTGAGGCCCAACTGAATCGTGGGGTGAGCTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR CCA 72 bp GCTTCCCATGGCTCAAAGATGGCTCTGTTCTTATGCTaGGGAAGCACGACTTTCCATGGCAGCCATTTGTGC +
Preference number: 3 (lower is better)
Translates to: ASHGSKMALFLC*GSTTFHGSHLC
Trigger: GCACAAATGGCTGCCATGGAAAGTCGTGCTTCCCCAGCATAAGAACAGAGCCATCTTTGAGCCATGGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR-3UTR CAA 90 bp CACCAGTCTGGCCCACCAGCTGTGAATTTGGTTCTGTTCTACCCCCAGAGGATGTTTAGTTTGCGGGGATaGAGGTTGGTCTGGTATTAC +
Preference number: 3 (lower is better)
Translates to: HQSGPPAVNLVLFYPQRMFSLRG*RLVWYY
Trigger: GTAATACCAGACCAACCTCAATCCCCGCAAACTAAA...CATCCTCTGGGGGTAGAACAGAACCAAATTCACAGCTGGTGGGCCAGACTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR TCA 72 bp TTATTGAAACATACTCAGCTCAGACGTACTGGCTTATaGAGCGGTCAGTCCTCCCCCGGCCCCCAAACACTA +
Preference number: 3 (lower is better)
Translates to: LLKHTQLRRTGL*SGQSSPGPQTL
Trigger: TAGTGTTTGGGGGCCGGGGGAGGACTGACCGCTTCATAAGCCAGTACGTCTGAGCTGAGTATGTTTCAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR GCA 72 bp GAACAGGGCGAGATGATCAAGGGAAGAAGGGACTGCTaGCCCAAGCCAGAATATTTCTATGGCTCTACAAGG +
Preference number: 3 (lower is better)
Translates to: EQGEMIKGRRDC*PKPEYFYGSTR
Trigger: CCTTGTAGAGCCATAGAAATATTCTGGCTTGGGGCAGCAGTCCCTTCTTCCCTTGATCATCTCGCCCTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR CCA 72 bp GCTAGGATTTCCAAATTTCCTGGCTGTGAGGCGGCCTaGTTCGGCAACTGTTACCGATTTCTCCCTCAAGAA +
Preference number: 3 (lower is better)
Translates to: ARISKFPGCEAA*FGNCYRFLPQE
Trigger: TTCTTGAGGGAGAAATCGGTAACAGTTGCCGAACCAGGCCGCCTCACAGCCAGGAAATTTGGAAATCCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR CCA 72 bp TATAAAAGCCACAATGCTCCCTTTCAACTTGGGGTTTaGCCTGAGGCGTTCAACTCAGCCTTGGCCAACCGA +
Preference number: 3 (lower is better)
Translates to: YKSHNAPFQLGV*PEAFNSALANR
Trigger: TCGGTTGGCCAAGGCTGAGTTGAACGCCTCAGGCCAAACCCCAAGTTGAAAGGGAGCATTGTGGCTTTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR CCA 72 bp GGCTCTGTTCTTATGCTGGGGAAGCACGACTTTCCATaGCAGCCATTTGTGCTGTGCTCACCTTATATGCTT +
Preference number: 3 (lower is better)
Translates to: GSVLMLGKHDFP*QPFVLCSPYML
Trigger: AAGCATATAAGGTGAGCACAGCACAAATGGCTGCCATGGAAAGTCGTGCTTCCCCAGCATAAGAACAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR-3UTR CAA 90 bp CACCAGTCTGGCCCACCAGCTGTGAATTTGGTTCTGTTCTACCCCCAGAGGATGTTACACGAAATCCCCTaGGCTAGGATTTCCAAATTT +
Preference number: 3 (lower is better)
Translates to: HQSGPPAVNLVLFYPQRMLHEIP*ARISKF
Trigger: AAATTTGGAAATCCTAGCCAAGGGGATTTCGTGTAA...CATCCTCTGGGGGTAGAACAGAACCAAATTCACAGCTGGTGGGCCAGACTGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR GCA 72 bp TTTGAATCGATGCTAGAGGTTATGCTGGCCAAACAGTaGAGAGAACATGGGGGCTTTGAATGGCCGAGATGT +
Preference number: 3 (lower is better)
Translates to: FESMLEVMLAKQ*REHGGFEWPRC
Trigger: ACATCTCGGCCATTCAAAGCCCCCATGTTCTCTGCACTGTTTGGCCAGCATAACCTCTAGCATCGATTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR-3UTR CAA 90 bp CTGGGGAAGCACGACTTTCCATGGCAGCCATTTGTGCTGTGCTCACCTTATATGGCAGAGACTAGGGCCTaGAGAAATATCAAAAGGTTT +
Preference number: 3 (lower is better)
Translates to: LGKHDFPWQPFVLCSPYMAETRA*RNIKRF
Trigger: AAACCTTTTGATATTTCTCAAGGCCCTAGTCTCTGC...CATATAAGGTGAGCACAGCACAAATGGCTGCCATGGAAAGTCGTGCTTCCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR GCA 72 bp TGCTGGGGAAGCACGACTTTCCATGGCAGCCATTTGTaGTGTGCTCACCTTATATGCTTGGACAATAAAGAA +
Preference number: 3 (lower is better)
Translates to: CWGSTTFHGSHL*CAHLICLDNKE
Trigger: TTCTTTATTGTCCAAGCATATAAGGTGAGCACAGCACAAATGGCTGCCATGGAAAGTCGTGCTTCCCCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR-3UTR CAA 90 bp AGCAACAAGAAACCCTCATGTGATCCATTCCATCCAGGAATTTTCACCATAGCATTGCGGGGATTGAGGTaGGTCTGGTATTACGTGTCT +
Preference number: 3 (lower is better)
Translates to: SNKKPSCDPFHPGIFTIALRGLR*VWYYVS
Trigger: AGACACGTAATACCAGACCAACCTCAATCCCCGCAA...TGCTATGGTGAAAATTCCTGGATGGAATGGATCACATGAGGGTTTCTTGTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR-3UTR CAA 90 bp ACCCTCATTTATACATTCCATGCCGTCAGGTTAAAACTCTGCTTTGAATCGATGGAGAACATGGGGGCTTaGAATGGCCGAGATGTTCGA +
Preference number: 3 (lower is better)
Translates to: TLIYTFHAVRLKLCFESMENMGA*NGRDVR
Trigger: TCGAACATCTCGGCCATTCAAAGCCCCCATGTTCTC...CATCGATTCAAAGCAGAGTTTTAACCTGACGGCATGGAATGTATAAATGAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR TCA 72 bp TATGCTGGCCAAACAGTGCAGAGAACATGGGGGCTTTaGATGGCCGAGATGTTCGAAATGCTAAATAACAAA +
Preference number: 3 (lower is better)
Translates to: YAGQTVQRTWGL*MAEMFEMLNNK
Trigger: TTTGTTATTTAGCATTTCGAACATCTCGGCCATTCAAAGCCCCCATGTTCTCTGCACTGTTTGGCCAGCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR-3UTR CAA 90 bp CTTTCCATGGCAGCCATTTGTGCTGTGCTCACCTTATATGCTTGGACAATAAAGACAGAAACAATGGGCTaGGAAAAGGGCTGTTTTCAT +
Preference number: 3 (lower is better)
Translates to: LSMAAICAVLTLYAWTIKTETMG*EKGCFH
Trigger: ATGAAAACAGCCCTTTTCCAAGCCCATTGTTTCTGT...CTTTATTGTCCAAGCATATAAGGTGAGCACAGCACAAATGGCTGCCATGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR TCA 72 bp AACTTAGAAAACGAACGTGTGAATTGCTCCATCGTGTaGATGGTATCAGAAAGCTCCAAAGGACTCCAGAGA +
Preference number: 3 (lower is better)
Translates to: NLENERVNCSIV*MVSESSKGLQR
Trigger: TCTCTGGAGTCCTTTGGAGCTTTCTGATACCATTCACACGATGGAGCAATTCACACGTTCGTTTTCTAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR TCA 72 bp TTTAATAACCAGACACGGAACAATTTGTGCTTACAATaGGAGATTTTGATCACAGATGCTCTCCTCCCGGGT +
Preference number: 3 (lower is better)
Translates to: FNNQTRNNLCLQ*EILITDALLPG
Trigger: ACCCGGGAGGAGAGCATCTGTGATCAAAATCTCTCATTGTAAGCACAAATTGTTCCGTGTCTGGTTATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR GCA 72 bp CTCATTTATACATTCCATGCCGTCAGGTTAAAACTCTaGTTTGAATCGATGCTAGAGGTTATGCTGGCCAAA +
Preference number: 3 (lower is better)
Translates to: LIYTFHAVRLKL*FESMLEVMLAK
Trigger: TTTGGCCAGCATAACCTCTAGCATCGATTCAAAGCAGAGTTTTAACCTGACGGCATGGAATGTATAAATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR GCA 72 bp TTCCATGGCAGCCATTTGTGCTGTGCTCACCTTATATaGTTGGACAATAAAGAACTTAGAAAACGAACGTGT +
Preference number: 3 (lower is better)
Translates to: FHGSHLCCAHLI*LDNKELRKRTC
Trigger: ACACGTTCGTTTTCTAAGTTCTTTATTGTCCAAGCATATAAGGTGAGCACAGCACAAATGGCTGCCATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR CCA 72 bp ATGGCAGCCATTTGTGCTGTGCTCACCTTATATGCTTaGACAATAAAGAACTTAGAAAACGAACGTGTGAAT +
Preference number: 3 (lower is better)
Translates to: MAAICAVLTLYA*TIKNLENERVN
Trigger: ATTCACACGTTCGTTTTCTAAGTTCTTTATTGTCCAAGCATATAAGGTGAGCACAGCACAAATGGCTGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR CCA 72 bp GAGAACTCCTGTAAGCTGGTATCATCATTGCATCATTaGATTATAAAAGCCACAATGCTCCCTTTCAACTTG +
Preference number: 3 (lower is better)
Translates to: ENSCKLVSSLHH*IIKATMLPFNL
Trigger: CAAGTTGAAAGGGAGCATTGTGGCTTTTATAATCCAATGATGCAATGATGATACCAGCTTACAGGAGTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR GCA 90 bp GCCTTCCAACCTGCCTCCCGGAGGGGCTTTCAGCTGGAGACCCCATTGGAGCTCGCCTGCCTTCCAACCTaGCTCCCGGAGGGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: AFQPASRRGFQLETPLELACLPT*LPEGLS
Trigger: TGAAAGCCCCTCCGGGAGGCAGGTTGGAAGGCAGGC...GAGCTCCAATGGGGTCTCCAGCTGAAAGCCCCTCCGGGAGGCAGGTTGGAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR GCA 90 bp GCAGCGAGAGGTCATCTCTGCATCCTAGTGGGAACCCCTGAAGCCCTGCTAGGTCCTCCGCACGCGCCATaGCTGGCTCAGCAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: AARGHLCILVGTPEALLGPPHAP*LAQQAG
Trigger: TCCTGCCTGCTGAGCCAGGCATGGCGCGTGCGGAGG...ACCTAGCAGGGCTTCAGGGGTTCCCACTAGGATGCAGAGATGACCTCTCGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR GCA 90 bp GCCTTCCAACCTGCCTCCCGGAGGGGCTTTCAGCTGGAGACCCCATTGGAGCTCTTGGGCGTGTTCTCCTaGAGGGCTGGCAGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: AFQPASRRGFQLETPLELLGVFS*RAGRRV
Trigger: CACCCTTCTGCCAGCCCTGCAGGAGAACACGCCCAA...GAGCTCCAATGGGGTCTCCAGCTGAAAGCCCCTCCGGGAGGCAGGTTGGAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR TCA 90 bp ACATGCCAGGGTCCCTCCACCTCTACTGGCTATAAAGCTCACCCCACGATTCAGGCATCAGGAGCAGTGTaGTCAGGGCGCCCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: TCQGPSTSTGYKAHPTIQASGAV*SGRPPR
Trigger: CCGGGGCGGGCGCCCTGATCACACTGCTCCTGATGC...CTGAATCGTGGGGTGAGCTTTATAGCCAGTAGAGGTGGAGGGACCCTGGCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR TCA 90 bp TGCCTCCCGGAGGGGCTTTCAGCTGGAGACCCCATTGGAGCTCTTGAAATGAATCGCTGGCCGCCAGCGTaGTGGCCAAGGTGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: CLPEGLSAGDPIGALEMNRWPPA*WPRWGR
Trigger: ACGACCCCACCTTGGCCATCACGCTGGCGGCCAGCG...ATTCATTTCAAGAGCTCCAATGGGGTCTCCAGCTGAAAGCCCCTCCGGGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR GCA 90 bp GCAGCGAGAGGTCATCTCTGCATCCTAGTGGGAACCCCTGAAGCCCTGCTAGGTCCCTCTCCCGGGGGCTaGAGGAAGGGGAGATGCAGA +
Preference number: 4 (lower is better)
Translates to: AARGHLCILVGTPEALLGPSPGG*RKGRCR
Trigger: TCTGCATCTCCCCTTCCTGCAGCCCCCGGGAGAGGG...ACCTAGCAGGGCTTCAGGGGTTCCCACTAGGATGCAGAGATGACCTCTCGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569479.5
CDS-3UTR CCA 90 bp GCCTTCCAACCTGCCTCCCGGAGGGGCTTTCAGCTGGAGACCCCATTGGAGCTCCAGGGAGGGCCAGATTaGCCTTACTTTCCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: AFQPASRRGFQLETPLELQGGPD*PYFPQC
Trigger: GCACTGGGGAAAGTAAGGCCAATCTGGCCCTCCCTG...GAGCTCCAATGGGGTCTCCAGCTGAAAGCCCCTCCGGGAGGCAGGTTGGAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR TCA 90 bp TGGCTCTACAAGGGAAGGGGCGGGGCCTGTGTTCTCACCATAGACACTAGAGCAACTTGCCGCACAGAGTaGAGAGGGCCAGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: WLYKGRGGACVLTIDTRATCRTE*RGPAPG
Trigger: CCCTGGGGCTGGCCCTCTTCACTCTGTGCGGCAAGT...TGCTCTAGTGTCTATGGTGAGAACACAGGCCCCGCCCCTTCCCTTGTAGAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR GCA 90 bp GGAAAACTCGAAGGCGGGTCACACAGGGAGGGCCAGATTGGCCTTACTTTCCCCGCCTGCCTTCCAACCTaGCTCCCGGAGGGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: GKLEGGSHREGQIGLTFPACLPT*LPEGLS
Trigger: TGAAAGCCCCTCCGGGAGGCAGGTTGGAAGGCAGGC...GGGGAAAGTAAGGCCAATCTGGCCCTCCCTGTGTGACCCGCCTTCGAGTTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CCA 90 bp GCCTTCCAACCTGCCTCCCGGAGGGGCTTTCAGCTGGAGACCCCATTGGAGCTCACGTGTCGAAGTAGTTaGGCGTGTTCTCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: AFQPASRRGFQLETPLELTCRSS*ACSPAG
Trigger: CCCTGCAGGAGAACACGCCCAACTACTTCGACACGT...GAGCTCCAATGGGGTCTCCAGCTGAAAGCCCCTCCGGGAGGCAGGTTGGAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp GCAGCGAGAGGTCATCTCTGCATCCTAGTGGGAACCCCTGAAGCCCTGCTAGGTGAGGTCAGGTGGGGGTaGCATTCTGGGGCCATGCGT +
Preference number: 4 (lower is better)
Translates to: AARGHLCILVGTPEALLGEVRWG*HSGAMR
Trigger: ACGCATGGCCCCAGAATGCCACCCCCACCTGACCTC...ACCTAGCAGGGCTTCAGGGGTTCCCACTAGGATGCAGAGATGACCTCTCGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR GCA 90 bp GCAGCGAGAGGTCATCTCTGCATCCTAGTGGGAACCCCTGAAGCCCTGCTAGGTTTGGGCGTGTTCTCCTaGAGGGCTGGCAGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: AARGHLCILVGTPEALLGLGVFS*RAGRRV
Trigger: CACCCTTCTGCCAGCCCTGCAGGAGAACACGCCCAA...ACCTAGCAGGGCTTCAGGGGTTCCCACTAGGATGCAGAGATGACCTCTCGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp GGTGTCACTGCTTGTGAGGCAGCGAGAGGTCATCTCTGCATCCTAGTGGGAACCCCGTCTCCCGCATCCTaGGCTGCGACGTGTCGAAGT +
Preference number: 4 (lower is better)
Translates to: GVTACEAARGHLCILVGTPSPAS*AATCRS
Trigger: ACTTCGACACGTCGCAGCCCAGGATGCGGGAGACGG...GGTTCCCACTAGGATGCAGAGATGACCTCTCGCTGCCTCACAAGCAGTGACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR CAA 72 bp CAACTTGGGGTTTGGCCTGAGGCGTTCAACTCAGCCTaGGCCAACCGAGACCACCACCCGAGTTCACCCTTG +
Preference number: 4 (lower is better)
Translates to: QLGVWPEAFNSA*ANRDHHPSSPL
Trigger: CAAGGGTGAACTCGGGTGGTGGTCTCGGTTGGCCAAGGCTGAGTTGAACGCCTCAGGCCAAACCCCAAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR TCA 90 bp GGACTGCTGCCCCAAGCCAGAATATTTCTATGGCTCTACAAGGGAAGGGGCGGGCAGAGGCCACCGAGGTaGTCACGAAGAGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: GLLPQARIFLWLYKGRGGQRPPR*SRRAGG
Trigger: TCCTCCTGCTCTTCGTGATCACCTCGGTGGCCTCTG...CCCGCCCCTTCCCTTGTAGAGCCATAGAAATATTCTGGCTTGGGGCAGCAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR TCA 90 bp GCAGCGAGAGGTCATCTCTGCATCCTAGTGGGAACCCCTGAAGCCCTGCTAGGTCAAATTTCCTGGCTGTaGGGCGGCCTGGTTCGGCAA +
Preference number: 4 (lower is better)
Translates to: AARGHLCILVGTPEALLGQISWL*GGLVRQ
Trigger: TTGCCGAACCAGGCCGCCTCACAGCCAGGAAATTTG...ACCTAGCAGGGCTTCAGGGGTTCCCACTAGGATGCAGAGATGACCTCTCGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR TCA 90 bp TGGCTCTACAAGGGAAGGGGCGGGGCCTGTGTTCTCACCATAGACACTAGAGCAAATAGTGGCAGCCCCTaGTCTTTGGGGACCGTGGCC +
Preference number: 4 (lower is better)
Translates to: WLYKGRGGACVLTIDTRANSGSP*SLGTVA
Trigger: GGCCACGGTCCCCAAAGATCAGGGGCTGCCACTATT...TGCTCTAGTGTCTATGGTGAGAACACAGGCCCCGCCCCTTCCCTTGTAGAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000569479.5
CDS-3UTR CCA 90 bp GGACTGCTGCCCCAAGCCAGAATATTTCTATGGCTCTACAAGGGAAGGGGCGGGAGCCTCGGGATGTGCTaGCGTTTTCAGAGGCCACCG +
Preference number: 4 (lower is better)
Translates to: GLLPQARIFLWLYKGRGGSLGMC*RFQRPP
Trigger: CGGTGGCCTCTGAAAACGCCAGCACATCCCGAGGCT...CCCGCCCCTTCCCTTGTAGAGCCATAGAAATATTCTGGCTTGGGGCAGCAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp ACATGCCAGGGTCCCTCCACCTCTACTGGCTATAAAGCTCACCCCACGATTCAGCTCGTAGGCGCAGGCTaGCCTTGTGTCACGCAGCAC +
Preference number: 4 (lower is better)
Translates to: TCQGPSTSTGYKAHPTIQLVGAG*PCVTQH
Trigger: GTGCTGCGTGACACAAGGCCAGCCTGCGCCTACGAG...CTGAATCGTGGGGTGAGCTTTATAGCCAGTAGAGGTGGAGGGACCCTGGCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp TGGCTCTACAAGGGAAGGGGCGGGGCCTGTGTTCTCACCATAGACACTAGAGCAGGCTGTGAGGCGGCCTaGTTCGGCAACTGTTACCGA +
Preference number: 4 (lower is better)
Translates to: WLYKGRGGACVLTIDTRAGCEAA*FGNCYR
Trigger: TCGGTAACAGTTGCCGAACCAGGCCGCCTCACAGCC...TGCTCTAGTGTCTATGGTGAGAACACAGGCCCCGCCCCTTCCCTTGTAGAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp CACCAGTCTGGCCCACCAGCTGTGAATTTGGTTCTGTTCTACCCCCAGAGGATGGCAGCCCCTGATCTTTaGGGACCGTGGCCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: HQSGPPAVNLVLFYPQRMAAPDL*GPWPFQ
Trigger: CTGGAAGGGCCACGGTCCCCAAAGATCAGGGGCTGC...CATCCTCTGGGGGTAGAACAGAACCAAATTCACAGCTGGTGGGCCAGACTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569479.5
CDS-3UTR TCA 90 bp GGACTGCTGCCCCAAGCCAGAATATTTCTATGGCTCTACAAGGGAAGGGGCGGGAGACGTACTGGCTTATaGAGCGGTCAGTCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: GLLPQARIFLWLYKGRGGRRTGL*SGQSSP
Trigger: GGGGGAGGACTGACCGCTTCATAAGCCAGTACGTCT...CCCGCCCCTTCCCTTGTAGAGCCATAGAAATATTCTGGCTTGGGGCAGCAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR TCA 90 bp TGCCTCCCGGAGGGGCTTTCAGCTGGAGACCCCATTGGAGCTCTTGAAATGAATCCTCCGCCCCCATTATaGAGGCGTTCAGCCCACTCT +
Preference number: 4 (lower is better)
Translates to: CLPEGLSAGDPIGALEMNPPPPL*RRSAHS
Trigger: AGAGTGGGCTGAACGCCTTCATAATGGGGGCGGAGG...ATTCATTTCAAGAGCTCCAATGGGGTCTCCAGCTGAAAGCCCCTCCGGGAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR GCA 90 bp CCCACCTCCAACCAACACCAGTCTGGCCCACCAGCTGTGAATTTGGTTCTGTTCGGGCTGGCAGAAGGGTaGAGTGGATCTCAGGGATGG +
Preference number: 4 (lower is better)
Translates to: PTSNQHQSGPPAVNLVLFGLAEG*SGSQGW
Trigger: CCATCCCTGAGATCCACTGCACCCTTCTGCCAGCCC...GAACAGAACCAAATTCACAGCTGGTGGGCCAGACTGGTGTTGGTTGGAGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR GCA 90 bp GGTGCCTGCCTTCCAACCTGCCTCCCGGAGGGGCTTTCAGCTGGAGACCCCATTTGGAATCCCTGGAGATaGACAGAACTTCCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: GACLPTCLPEGLSAGDPIWNPWR*TELPSL
Trigger: CAAACTGGGAAGTTCTGTGCATCTCCAGGGATTCCA...AATGGGGTCTCCAGCTGAAAGCCCCTCCGGGAGGCAGGTTGGAAGGCAGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR GCA 90 bp GAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACCCGGGCCACTGGCCGTaGGCTCCGCAGACGGTCAGG +
Preference number: 4 (lower is better)
Translates to: ERHSQGGKSVREILILWNPGHWP*APQTVR
Trigger: CCTGACCGTCTGCGGAGCGCACGGCCAGTGGCCCGG...GTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569847.1
CDS-3UTR CCA 90 bp TGCCTCCCGGAGGGGCTTTCAGCTGGAGACCCCATTGGAGCTCTTGAAATGAATAGCCTCGGGATGTGCTaGCGTTTTCAGAGGCCACCG +
Preference number: 4 (lower is better)
Translates to: CLPEGLSAGDPIGALEMNSLGMC*RFQRPP
Trigger: CGGTGGCCTCTGAAAACGCCAGCACATCCCGAGGCT...ATTCATTTCAAGAGCTCCAATGGGGTCTCCAGCTGAAAGCCCCTCCGGGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp ACATGCCAGGGTCCCTCCACCTCTACTGGCTATAAAGCTCACCCCACGATTCAGGGCTGTGAGGCGGCCTaGTTCGGCAACTGTTACCGA +
Preference number: 4 (lower is better)
Translates to: TCQGPSTSTGYKAHPTIQGCEAA*FGNCYR
Trigger: TCGGTAACAGTTGCCGAACCAGGCCGCCTCACAGCC...CTGAATCGTGGGGTGAGCTTTATAGCCAGTAGAGGTGGAGGGACCCTGGCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp GGTGTCACTGCTTGTGAGGCAGCGAGAGGTCATCTCTGCATCCTAGTGGGAACCCACCAGGCAAGCCGGTaGCAAAGTCCCCATTTGTCC +
Preference number: 4 (lower is better)
Translates to: GVTACEAARGHLCILVGTHQASR*QSPHLS
Trigger: GGACAAATGGGGACTTTGCCACCGGCTTGCCTGGTG...GGTTCCCACTAGGATGCAGAGATGACCTCTCGCTGCCTCACAAGCAGTGACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp GGTGCCTGCCTTCCAACCTGCCTCCCGGAGGGGCTTTCAGCTGGAGACCCCATTGCCAGAATATTTCTATaGCTCTACAAGGGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: GACLPTCLPEGLSAGDPIARIFL*LYKGRG
Trigger: GCCCCTTCCCTTGTAGAGCCATAGAAATATTCTGGC...AATGGGGTCTCCAGCTGAAAGCCCCTCCGGGAGGCAGGTTGGAAGGCAGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR TCA 90 bp CAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGGCATCAGGAGCAGTGTaGTCAGGGCGCCCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: QERHSQGGKSVREILILWASGAV*SGRPPR
Trigger: CCGGGGCGGGCGCCCTGATCACACTGCTCCTGATGC...CCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR TCA 90 bp CACCAGTCTGGCCCACCAGCTGTGAATTTGGTTCTGTTCTACCCCCAGAGGATGAGGTGTCTTCCTGTGTaGCTTGGCGGAGCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: HQSGPPAVNLVLFYPQRMRCLPV*LGGAVG
Trigger: CCCAACTGCTCCGCCAAGTCACACAGGAAGACACCT...CATCCTCTGGGGGTAGAACAGAACCAAATTCACAGCTGGTGGGCCAGACTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR TCA 90 bp CACCAGTCTGGCCCACCAGCTGTGAATTTGGTTCTGTTCTACCCCCAGAGGATGCAAATTTCCTGGCTGTaGGGCGGCCTGGTTCGGCAA +
Preference number: 4 (lower is better)
Translates to: HQSGPPAVNLVLFYPQRMQISWL*GGLVRQ
Trigger: TTGCCGAACCAGGCCGCCTCACAGCCAGGAAATTTG...CATCCTCTGGGGGTAGAACAGAACCAAATTCACAGCTGGTGGGCCAGACTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR GCA 90 bp CACCAGTCTGGCCCACCAGCTGTGAATTTGGTTCTGTTCTACCCCCAGAGGATGCACAGCCTCGGGATGTaGTGGCGTTTTCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: HQSGPPAVNLVLFYPQRMHSLGM*WRFQRP
Trigger: TGGCCTCTGAAAACGCCAGCACATCCCGAGGCTGTG...CATCCTCTGGGGGTAGAACAGAACCAAATTCACAGCTGGTGGGCCAGACTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR GCA 90 bp CCCACCTCCAACCAACACCAGTCTGGCCCACCAGCTGTGAATTTGGTTCTGTTCCACAGCCTCGGGATGTaGTGGCGTTTTCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: PTSNQHQSGPPAVNLVLFHSLGM*WRFQRP
Trigger: TGGCCTCTGAAAACGCCAGCACATCCCGAGGCTGTG...GAACAGAACCAAATTCACAGCTGGTGGGCCAGACTGGTGTTGGTTGGAGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR GCA 90 bp TGCCTCCCGGAGGGGCTTTCAGCTGGAGACCCCATTGGAGCTCTTGAAATGAATTTCCAGGCATCCCCCTaGTGCAGCTTGACATTGCCG +
Preference number: 4 (lower is better)
Translates to: CLPEGLSAGDPIGALEMNFQASP*CSLTLP
Trigger: CGGCAATGTCAAGCTGCAGCAGGGGGATGCCTGGAA...ATTCATTTCAAGAGCTCCAATGGGGTCTCCAGCTGAAAGCCCCTCCGGGAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR GCA 90 bp CTATGGCTCTACAAGGGAAGGGGCGGGGCCTGTGTTCTCACCATAGACACTAGATCATCGCGGAAAACCTaGCGTGGTGCCTGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: LWLYKGRGGACVLTIDTRSSRKT*RGACLP
Trigger: TGGAAGGCAGGCACCACGGCAGGTTTTCCGCGATGA...TCTAGTGTCTATGGTGAGAACACAGGCCCCGCCCCTTCCCTTGTAGAGCCATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR GCA 90 bp GGTGTCACTGCTTGTGAGGCAGCGAGAGGTCATCTCTGCATCCTAGTGGGAACCGCGAGAGGTCATCTCTaGATCCTAGTGGGAACCCCT +
Preference number: 4 (lower is better)
Translates to: GVTACEAARGHLCILVGTARGHL*ILVGTP
Trigger: AGGGGTTCCCACTAGGATGCAGAGATGACCTCTCGC...GGTTCCCACTAGGATGCAGAGATGACCTCTCGCTGCCTCACAAGCAGTGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp CTATGGCTCTACAAGGGAAGGGGCGGGGCCTGTGTTCTCACCATAGACACTAGAGTTCTCCTGCAGGGCTaGCAGAAGGGTGCAGTGGAT +
Preference number: 4 (lower is better)
Translates to: LWLYKGRGGACVLTIDTRVLLQG*QKGAVD
Trigger: ATCCACTGCACCCTTCTGCCAGCCCTGCAGGAGAAC...TCTAGTGTCTATGGTGAGAACACAGGCCCCGCCCCTTCCCTTGTAGAGCCATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp AAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTCGGACGCGTGTCCGCTaGGCGGCCGTGGGACCTGCT +
Preference number: 4 (lower is better)
Translates to: KTQPGRQIGKRNSDSLELRTRVR*AAVGPA
Trigger: AGCAGGTCCCACGGCCGCCCAGCGGACACGCGTCCG...AAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569847.1
3UTR CAA 72 bp GCAAACCACCAGGCAAGCCGGTGGCAAAGTCCCCATTaGTCCTCAACGCAACGGTCATCTCCAAGAGGCTAC +
Preference number: 4 (lower is better)
Translates to: ANHQASRWQSPH*SSTQRSSPRGY
Trigger: GTAGCCTCTTGGAGATGACCGTTGCGTTGAGGACAAATGGGGACTTTGCCACCGGCTTGCCTGGTGGTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR CAA 72 bp GAAAACTCGAAGGCGGGTCACACAGGGAGGGCCAGATaGGCCTTACTTTCCCCAGTGCTTTGCAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: ENSKAGHTGRAR*ALLSPVLCKDG
Trigger: CCCATCCTTGCAAAGCACTGGGGAAAGTAAGGCCAATCTGGCCCTCCCTGTGTGACCCGCCTTCGAGTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR TCA 90 bp AAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTCGCTGGCCGCCAGCGTaGTGGCCAAGGTGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: KTQPGRQIGKRNSDSLELRWPPA*WPRWGR
Trigger: ACGACCCCACCTTGGCCATCACGCTGGCGGCCAGCG...AAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR TCA 90 bp AGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTACGCTGGCCGCCAGCGTaGTGGCCAAGGTGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: RHSQGGKSVREILILWNLRWPPA*WPRWGR
Trigger: ACGACCCCACCTTGGCCATCACGCTGGCGGCCAGCG...TAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR TCA 90 bp TCCATTCCATCCAGGAATTTTCACCATAGCAACGGAAAGGACCCGAGGTGTCACGGATGGTCCCACCGTTaGGCACGACGGCCATCTCAG +
Preference number: 4 (lower is better)
Translates to: SIPSRNFHHSNGKDPRCHGWSHR*ARRPSQ
Trigger: CTGAGATGGCCGTCGTGCTCAACGGTGGGACCATCC...GTGACACCTCGGGTCCTTTCCGTTGCTATGGTGAAAATTCCTGGATGGAATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR TCA 90 bp GGTGTCACTGCTTGTGAGGCAGCGAGAGGTCATCTCTGCATCCTAGTGGGAACCAGGAACAGGGCGAGATaGTCAAGGGAAGAAGGGACT +
Preference number: 4 (lower is better)
Translates to: GVTACEAARGHLCILVGTRNRAR*SREEGT
Trigger: AGTCCCTTCTTCCCTTGATCATCTCGCCCTGTTCCT...GGTTCCCACTAGGATGCAGAGATGACCTCTCGCTGCCTCACAAGCAGTGACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR TCA 90 bp CTATGGCTCTACAAGGGAAGGGGCGGGGCCTGTGTTCTCACCATAGACACTAGAGCCACGAACATTCTTTaGGCAGCATCCCTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LWLYKGRGGACVLTIDTRATNIL*AASLPC
Trigger: GCAGGGAAGGGATGCTGCTCAAAGAATGTTCGTGGC...TCTAGTGTCTATGGTGAGAACACAGGCCCCGCCCCTTCCCTTGTAGAGCCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569479.5
CDS-3UTR GCA 90 bp CAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGCCTCCGCACGCGCCATaGCTGGCTCAGCAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: QERHSQGGKSVREILILWPPHAP*LAQQAG
Trigger: TCCTGCCTGCTGAGCCAGGCATGGCGCGTGCGGAGG...CCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR GCA 90 bp TTTGATCACAGATGCTCTCCTCCCGGGTCGTTTTCCCCAAACGAGTCTTGTTTAACCTGCCGTGGTGCCTaGCTTCCAACCTGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: FDHRCSPPGSFSPNESCLTCRGA*LPTCLP
Trigger: CGGGAGGCAGGTTGGAAGGCAGGCACCACGGCAGGT...TAAACAAGACTCGTTTGGGGAAAACGACCCGGGAGGAGAGCATCTGTGATCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR TCA 90 bp TGTGAATTTGGTTCTGTTCTACCCCCAGAGGATGAAACAGTCTTCCCAGCCACACACAGGGACACGTACTaGGGGAGGAGGTCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: CEFGSVLPPEDETVFPATHRDTY*GRRSSP
Trigger: TGGGCTGGACCTCCTCCCTCAGTACGTGTCCCTGTG...TGTGGCTGGGAAGACTGTTTCATCCTCTGGGGGTAGAACAGAACCAAATTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR TCA 90 bp TGCTTTAGTTTGCGGGGATTGAGGTTGGTCTGGTATTACGTGTCTGTGTGTGTGTGTCACGCAGCACGGTaGGCACCAGCCACTCCACAG +
Preference number: 4 (lower is better)
Translates to: CFSLRGLRLVWYYVSVCVCHAAR*APATPQ
Trigger: CTGTGGAGTGGCTGGTGCTCACCGTGCTGCGTGACA...CACACACACAGACACGTAATACCAGACCAACCTCAATCCCCGCAAACTAAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR TCA 90 bp TGTGAATTTGGTTCTGTTCTACCCCCAGAGGATGAAACAGTCTTCCCAGCCACAGGATGGTCCCACCGTTaGGCACGACGGCCATCTCAG +
Preference number: 4 (lower is better)
Translates to: CEFGSVLPPEDETVFPATGWSHR*ARRPSQ
Trigger: CTGAGATGGCCGTCGTGCTCAACGGTGGGACCATCC...TGTGGCTGGGAAGACTGTTTCATCCTCTGGGGGTAGAACAGAACCAAATTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR TCA 90 bp GAAACATACTCAGCTCAGACGTACTGGCTTATGAAGCGGTCAGTCCTCCCCCGGAGGAACAGGGCGAGATaGTCAAGGGAAGAAGGGACT +
Preference number: 4 (lower is better)
Translates to: ETYSAQTYWLMKRSVLPRRNRAR*SREEGT
Trigger: AGTCCCTTCTTCCCTTGATCATCTCGCCCTGTTCCT...CCGGGGGAGGACTGACCGCTTCATAAGCCAGTACGTCTGAGCTGAGTATGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR TCA 90 bp CTGGGGAAGCACGACTTTCCATGGCAGCCATTTGTGCTGTGCTCACCTTATATGTCCAGAGAGCGGGGGTaGGTAACCATTTCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: LGKHDFPWQPFVLCSPYMSRERG*VTISWH
Trigger: GTGCCAGGAAATGGTTACTCACCCCCGCTCTCTGGA...CATATAAGGTGAGCACAGCACAAATGGCTGCCATGGAAAGTCGTGCTTCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR GCA 90 bp GGTGTTAGCTTTTCAGTTCGTCAGTGTTCACATTTACACGAAATCCCCTTGGCTCCACGCACGCCCGCCTaGGGGTCCAGCTTCACTGCA +
Preference number: 4 (lower is better)
Translates to: GVSFSVRQCSHLHEIPLAPRTPA*GSSFTA
Trigger: TGCAGTGAAGCTGGACCCGCAGGCGGGCGTGCGTGG...AGCCAAGGGGATTTCGTGTAAATGTGAACACTGACGAACTGAAAAGCTAACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR GCA 90 bp CCCACCCTCATTTATACATTCCATGCCGTCAGGTTAAAACTCTGCTTTGAATCGCCTCCGCACGCGCCATaGCTGGCTCAGCAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PTLIYTFHAVRLKLCFESPPHAP*LAQQAG
Trigger: TCCTGCCTGCTGAGCCAGGCATGGCGCGTGCGGAGG...CGATTCAAAGCAGAGTTTTAACCTGACGGCATGGAATGTATAAATGAGGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR GCA 90 bp CACCAGTCTGGCCCACCAGCTGTGAATTTGGTTCTGTTCTACCCCCAGAGGATGGCCGTTGGGAAATCCTaGTGTTCGGAGAGCTGCATT +
Preference number: 4 (lower is better)
Translates to: HQSGPPAVNLVLFYPQRMAVGKS*CSESCI
Trigger: AATGCAGCTCTCCGAACAGCAGGATTTCCCAACGGC...CATCCTCTGGGGGTAGAACAGAACCAAATTCACAGCTGGTGGGCCAGACTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR GCA 90 bp CTGGGGAAGCACGACTTTCCATGGCAGCCATTTGTGCTGTGCTCACCTTATATGTCATCGCGGAAAACCTaGCGTGGTGCCTGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: LGKHDFPWQPFVLCSPYMSSRKT*RGACLP
Trigger: TGGAAGGCAGGCACCACGGCAGGTTTTCCGCGATGA...CATATAAGGTGAGCACAGCACAAATGGCTGCCATGGAAAGTCGTGCTTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR GCA 90 bp CACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAAGTGGGCAGAGGCGGGGTaGTTCCGGGGAGGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: HSQGGKSVREILILWNLKWAEAG*FRGGQV
Trigger: CACCTGACCTCCCCGGAAGCACCCCGCCTCTGCCCA...CTTTAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR GCA 90 bp TCAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGCGCGGAAGCCTTCCTaGCCCCAGGCCACGCTCCAA +
Preference number: 4 (lower is better)
Translates to: SRKTQPGRQIGKRNSDSLARKPS*PQATLQ
Trigger: TTGGAGCGTGGCCTGGGGGCAGGAAGGCTTCCGCGC...CAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569847.1
CDS-3UTR CCA 90 bp TCTTATGCTGGGGAAGCACGACTTTCCATGGCAGCCATTTGTGCTGTGCTCACCACGTGTCGAAGTAGTTaGGCGTGTTCTCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SYAGEARLSMAAICAVLTTCRSS*ACSPAG
Trigger: CCCTGCAGGAGAACACGCCCAACTACTTCGACACGT...GGTGAGCACAGCACAAATGGCTGCCATGGAAAGTCGTGCTTCCCCAGCATAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CCA 90 bp GAAACATACTCAGCTCAGACGTACTGGCTTATGAAGCGGTCAGTCCTCCCCCGGTTCCCAAGCTGCCGTTaGGAAATCCTGCTGTTCGGA +
Preference number: 4 (lower is better)
Translates to: ETYSAQTYWLMKRSVLPRFPSCR*EILLFG
Trigger: TCCGAACAGCAGGATTTCCCAACGGCAGCTTGGGAA...CCGGGGGAGGACTGACCGCTTCATAAGCCAGTACGTCTGAGCTGAGTATGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp GGTGCCTGCCTTCCAACCTGCCTCCCGGAGGGGCTTTCAGCTGGAGACCCCATTTACACGAAATCCCCTTaGCTAGGATTTCCAAATTTC +
Preference number: 4 (lower is better)
Translates to: GACLPTCLPEGLSAGDPIYTKSP*LGFPNF
Trigger: GAAATTTGGAAATCCTAGCCAAGGGGATTTCGTGTA...AATGGGGTCTCCAGCTGAAAGCCCCTCCGGGAGGCAGGTTGGAAGGCAGGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp TCTTATGCTGGGGAAGCACGACTTTCCATGGCAGCCATTTGTGCTGTGCTCACCAGTTGGGCCTCACCTTaGAATCCCACCCACAACCTC +
Preference number: 4 (lower is better)
Translates to: SYAGEARLSMAAICAVLTSWASP*NPTHNL
Trigger: GAGGTTGTGGGTGGGATTCCAAGGTGAGGCCCAACT...GGTGAGCACAGCACAAATGGCTGCCATGGAAAGTCGTGCTTCCCCAGCATAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CCA 90 bp GAAATGTGCAAACCACCAGGCAAGCCGGTGGCAAAGTCCCCATTTGTCCTCAACACCCCACGATTCAGTTaGGCCTCACCTTGGAATCCC +
Preference number: 4 (lower is better)
Translates to: EMCKPPGKPVAKSPFVLNTPRFS*ASPWNP
Trigger: GGGATTCCAAGGTGAGGCCCAACTGAATCGTGGGGT...GTTGAGGACAAATGGGGACTTTGCCACCGGCTTGCCTGGTGGTTTGCACATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp TCCATTCCATCCAGGAATTTTCACCATAGCAACGGAAAGGACCCGAGGTGTCACAGCAAGCACATGCTCTaGGCAGAGGCGGGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: SIPSRNFHHSNGKDPRCHSKHML*AEAGCF
Trigger: GAAGCACCCCGCCTCTGCCCAGAGCATGTGCTTGCT...GTGACACCTCGGGTCCTTTCCGTTGCTATGGTGAAAATTCCTGGATGGAATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CCA 90 bp CCCTCAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTGGTGCACCCCTCACGTaGGTCCCTACGCAGGATCGC +
Preference number: 4 (lower is better)
Translates to: PSRKTQPGRQIGKRNSDSGAPLT*VPTQDR
Trigger: GCGATCCTGCGTAGGGACCCACGTGAGGGGTGCACC...AGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569847.1
3UTR CAA 72 bp ACCTCTACTGGCTATAAAGCTCACCCCACGATTCAGTaGGGCCTCACCTTGGAATCCCACCCACAACCTCCT +
Preference number: 4 (lower is better)
Translates to: TSTGYKAHPTIQ*GLTLESHPQPP
Trigger: AGGAGGTTGTGGGTGGGATTCCAAGGTGAGGCCCAACTGAATCGTGGGGTGAGCTTTATAGCCAGTAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR TCA 90 bp TGCTTTAGTTTGCGGGGATTGAGGTTGGTCTGGTATTACGTGTCTGTGTGTGTGCAGAGGCCACCGAGGTaGTCACGAAGAGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: CFSLRGLRLVWYYVSVCVQRPPR*SRRAGG
Trigger: TCCTCCTGCTCTTCGTGATCACCTCGGTGGCCTCTG...CACACACACAGACACGTAATACCAGACCAACCTCAATCCCCGCAAACTAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR TCA 90 bp CCCAAGCCAGAATATTTCTATGGCTCTACAAGGGAAGGGGCGGGGCCTGTGTTCGTACCATGTCGTAGATaGGGGCCATCACAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: PKPEYFYGSTREGAGPVFVPCRR*GPSQSP
Trigger: TGGACTTTGTGATGGCCCTCATCTACGACATGGTAC...GAACACAGGCCCCGCCCCTTCCCTTGTAGAGCCATAGAAATATTCTGGCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR TCA 90 bp AGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAAACTTGCCGCACAGAGTaGAGAGGGCCAGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: RKTQPGRQIGKRNSDSLETCRTE*RGPAPG
Trigger: CCCTGGGGCTGGCCCTCTTCACTCTGTGCGGCAAGT...TTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR TCA 90 bp CCTCAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCGGATGGCGTGGAAGATaGCGAAGACCCAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: PQERHSQGGKSVREILILGWRGR*RRPSRW
Trigger: CCAGCGGCTGGGTCTTCGTCATCTTCCACGCCATCC...GAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR TCA 90 bp GAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACGGATGGTCCCACCGTTaGGCACGACGGCCATCTCAG +
Preference number: 4 (lower is better)
Translates to: ERHSQGGKSVREILILWNGWSHR*ARRPSQ
Trigger: CTGAGATGGCCGTCGTGCTCAACGGTGGGACCATCC...GTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR TCA 90 bp CACCAGTCTGGCCCACCAGCTGTGAATTTGGTTCTGTTCTACCCCCAGAGGATGAGAACATGGGGGCTTTaGATGGCCGAGATGTTCGAA +
Preference number: 4 (lower is better)
Translates to: HQSGPPAVNLVLFYPQRMRTWGL*MAEMFE
Trigger: TTCGAACATCTCGGCCATTCAAAGCCCCCATGTTCT...CATCCTCTGGGGGTAGAACAGAACCAAATTCACAGCTGGTGGGCCAGACTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR GCA 90 bp CACCAGTCTGGCCCACCAGCTGTGAATTTGGTTCTGTTCTACCCCCAGAGGATGAAGGGAAGAAGGGACTaGTGCCCCAAGCCAGAATAT +
Preference number: 4 (lower is better)
Translates to: HQSGPPAVNLVLFYPQRMKGRRD*CPKPEY
Trigger: ATATTCTGGCTTGGGGCAGCAGTCCCTTCTTCCCTT...CATCCTCTGGGGGTAGAACAGAACCAAATTCACAGCTGGTGGGCCAGACTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR GCA 90 bp CAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAAGTCACCTGCCGTGGTGCCTaGCTTCCAACCTGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: QPGRQIGKRNSDSLELKVTCRGA*LPTCLP
Trigger: CGGGAGGCAGGTTGGAAGGCAGGCACCACGGCAGGT...GACTTTAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR GCA 90 bp CCCACCTCCAACCAACACCAGTCTGGCCCACCAGCTGTGAATTTGGTTCTGTTCATGCTGGCCAAACAGTaGAGAGAACATGGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: PTSNQHQSGPPAVNLVLFMLAKQ*REHGGF
Trigger: AAAGCCCCCATGTTCTCTGCACTGTTTGGCCAGCAT...GAACAGAACCAAATTCACAGCTGGTGGGCCAGACTGGTGTTGGTTGGAGGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR GCA 90 bp GGTGTCACTGCTTGTGAGGCAGCGAGAGGTCATCTCTGCATCCTAGTGGGAACCGATTTTGATCACAGATaGTCTCCTCCCGGGTCGTTT +
Preference number: 4 (lower is better)
Translates to: GVTACEAARGHLCILVGTDFDHR*SPPGSF
Trigger: AAACGACCCGGGAGGAGAGCATCTGTGATCAAAATC...GGTTCCCACTAGGATGCAGAGATGACCTCTCGCTGCCTCACAAGCAGTGACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR GCA 90 bp CAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAAGTCCACACGTCCAGTCGGTaGACCCCTCACGTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: QPGRQIGKRNSDSLELKVHTSSR*TPHVGP
Trigger: GGGACCCACGTGAGGGGTGCACCGACTGGACGTGTG...GACTTTAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569847.1
CDS-3UTR CCA 90 bp GAAATGTGCAAACCACCAGGCAAGCCGGTGGCAAAGTCCCCATTTGTCCTCAACTCTTCCTGTGTGACTTaGCGGAGCAGTTGGGATGGT +
Preference number: 4 (lower is better)
Translates to: EMCKPPGKPVAKSPFVLNSSCVT*RSSWDG
Trigger: ACCATCCCAACTGCTCCGCCAAGTCACACAGGAAGA...GTTGAGGACAAATGGGGACTTTGCCACCGGCTTGCCTGGTGGTTTGCACATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp CACCAGTCTGGCCCACCAGCTGTGAATTTGGTTCTGTTCTACCCCCAGAGGATGCATGGGGGCTTTGAATaGCCGAGATGTTCGAAATGC +
Preference number: 4 (lower is better)
Translates to: HQSGPPAVNLVLFYPQRMHGGFE*PRCSKC
Trigger: GCATTTCGAACATCTCGGCCATTCAAAGCCCCCATG...CATCCTCTGGGGGTAGAACAGAACCAAATTCACAGCTGGTGGGCCAGACTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp CTATGGCTCTACAAGGGAAGGGGCGGGGCCTGTGTTCTCACCATAGACACTAGACCCATGGCTCAAAGATaGCTCTGTTCTTATGCTGGG +
Preference number: 4 (lower is better)
Translates to: LWLYKGRGGACVLTIDTRPMAQR*LCSYAG
Trigger: CCCAGCATAAGAACAGAGCCATCTTTGAGCCATGGG...TCTAGTGTCTATGGTGAGAACACAGGCCCCGCCCCTTCCCTTGTAGAGCCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR TCA 90 bp AAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTTGTCACGCAGCACGGTaGGCACCAGCCACTCCACAG +
Preference number: 4 (lower is better)
Translates to: KTQPGRQIGKRNSDSLELCHAAR*APATPQ
Trigger: CTGTGGAGTGGCTGGTGCTCACCGTGCTGCGTGACA...AAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR TCA 90 bp AGCAACAAGAAACCCTCATGTGATCCATTCCATCCAGGAATTTTCACCATAGCAACTTGCCGCACAGAGTaGAGAGGGCCAGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SNKKPSCDPFHPGIFTIATCRTE*RGPAPG
Trigger: CCCTGGGGCTGGCCCTCTTCACTCTGTGCGGCAAGT...TGCTATGGTGAAAATTCCTGGATGGAATGGATCACATGAGGGTTTCTTGTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR TCA 90 bp CACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAAGGGATGGCGTGGAAGATaGCGAAGACCCAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: HSQGGKSVREILILWNLKGWRGR*RRPSRW
Trigger: CCAGCGGCTGGGTCTTCGTCATCTTCCACGCCATCC...CTTTAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR TCA 90 bp AGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAAGGATGGCGTGGAAGATaGCGAAGACCCAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: RKTQPGRQIGKRNSDSLEGWRGR*RRPSRW
Trigger: CCAGCGGCTGGGTCTTCGTCATCTTCCACGCCATCC...TTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR TCA 90 bp CTATGGCTCTACAAGGGAAGGGGCGGGGCCTGTGTTCTCACCATAGACACTAGATTAGTTTGCGGGGATTaGGGTTGGTCTGGTATTACG +
Preference number: 4 (lower is better)
Translates to: LWLYKGRGGACVLTIDTRLVCGD*GWSGIT
Trigger: CGTAATACCAGACCAACCTCAATCCCCGCAAACTAA...TCTAGTGTCTATGGTGAGAACACAGGCCCCGCCCCTTCCCTTGTAGAGCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR GCA 90 bp TGCTTTAGTTTGCGGGGATTGAGGTTGGTCTGGTATTACGTGTCTGTGTGTGTGCAGGCATCCCCCTGCTaGAGCTTGACATTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: CFSLRGLRLVWYYVSVCVQASPC*SLTLPK
Trigger: CTTCGGCAATGTCAAGCTGCAGCAGGGGGATGCCTG...CACACACACAGACACGTAATACCAGACCAACCTCAATCCCCGCAAACTAAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR GCA 90 bp CCTCAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCGGGCTGGCAGAAGGGTaGAGTGGATCTCAGGGATGG +
Preference number: 4 (lower is better)
Translates to: PQERHSQGGKSVREILILGLAEG*SGSQGW
Trigger: CCATCCCTGAGATCCACTGCACCCTTCTGCCAGCCC...GAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR GCA 90 bp CCCTCAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTTTGGGCGTGTTCTCCTaGAGGGCTGGCAGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: PSRKTQPGRQIGKRNSDSLGVFS*RAGRRV
Trigger: CACCCTTCTGCCAGCCCTGCAGGAGAACACGCCCAA...AGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR CCA 90 bp TCAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGCCACAATGCCCCAGATaGCGTCCAGGTCGCACAGGG +
Preference number: 4 (lower is better)
Translates to: SRKTQPGRQIGKRNSDSLPQCPR*RPGRTG
Trigger: CCCTGTGCGACCTGGACGCCATCTGGGGCATTGTGG...CAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR CCA 90 bp CACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAAGCTCGTAGGCGCAGGCTaGCCTTGTGTCACGCAGCAC +
Preference number: 4 (lower is better)
Translates to: HSQGGKSVREILILWNLKLVGAG*PCVTQH
Trigger: GTGCTGCGTGACACAAGGCCAGCCTGCGCCTACGAG...CTTTAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR CCA 90 bp AGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTACTCGTAGGCGCAGGCTaGCCTTGTGTCACGCAGCAC +
Preference number: 4 (lower is better)
Translates to: RHSQGGKSVREILILWNLLVGAG*PCVTQH
Trigger: GTGCTGCGTGACACAAGGCCAGCCTGCGCCTACGAG...TAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR CCA 90 bp TTTGATCACAGATGCTCTCCTCCCGGGTCGTTTTCCCCAAACGAGTCTTGTTTAGTTCTCCTGCAGGGCTaGCAGAAGGGTGCAGTGGAT +
Preference number: 4 (lower is better)
Translates to: FDHRCSPPGSFSPNESCLVLLQG*QKGAVD
Trigger: ATCCACTGCACCCTTCTGCCAGCCCTGCAGGAGAAC...TAAACAAGACTCGTTTGGGGAAAACGACCCGGGAGGAGAGCATCTGTGATCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CCA 90 bp CACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAAGCCGTCTCCCGCATCCTaGGCTGCGACGTGTCGAAGT +
Preference number: 4 (lower is better)
Translates to: HSQGGKSVREILILWNLKPSPAS*AATCRS
Trigger: ACTTCGACACGTCGCAGCCCAGGATGCGGGAGACGG...CTTTAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR CCA 90 bp CAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAAGTCCCGTCTCCCGCATCCTaGGCTGCGACGTGTCGAAGT +
Preference number: 4 (lower is better)
Translates to: QPGRQIGKRNSDSLELKVPSPAS*AATCRS
Trigger: ACTTCGACACGTCGCAGCCCAGGATGCGGGAGACGG...GACTTTAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR CCA 90 bp CAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGCTCCAAGAGGCTACCTaGGGTCCAGCACTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: QERHSQGGKSVREILILWLQEAT*GPALAG
Trigger: CCCAGCAAGTGCTGGACCCCAGGTAGCCTCTTGGAG...CCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp TCCATTCCATCCAGGAATTTTCACCATAGCAACGGAAAGGACCCGAGGTGTCACAGTTGGGCCTCACCTTaGAATCCCACCCACAACCTC +
Preference number: 4 (lower is better)
Translates to: SIPSRNFHHSNGKDPRCHSWASP*NPTHNL
Trigger: GAGGTTGTGGGTGGGATTCCAAGGTGAGGCCCAACT...GTGACACCTCGGGTCCTTTCCGTTGCTATGGTGAAAATTCCTGGATGGAATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp TGCCTCCCGGAGGGGCTTTCAGCTGGAGACCCCATTGGAGCTCTTGAAATGAATGCCAGAATATTTCTATaGCTCTACAAGGGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: CLPEGLSAGDPIGALEMNARIFL*LYKGRG
Trigger: GCCCCTTCCCTTGTAGAGCCATAGAAATATTCTGGC...ATTCATTTCAAGAGCTCCAATGGGGTCTCCAGCTGAAAGCCCCTCCGGGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp TATAAAAGCCACAATGCTCCCTTTCAACTTGGGGTTTGGCCTGAGGCGTTCAACGGAGGGGCTTTCAGCTaGAGACCCCATTGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: YKSHNAPFQLGVWPEAFNGGAFS*RPHWSS
Trigger: AGAGCTCCAATGGGGTCTCCAGCTGAAAGCCCCTCC...GTTGAACGCCTCAGGCCAAACCCCAAGTTGAAAGGGAGCATTGTGGCTTTTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR TCA 90 bp AAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTCAGAGGCCACCGAGGTaGTCACGAAGAGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: KTQPGRQIGKRNSDSLELQRPPR*SRRAGG
Trigger: TCCTCCTGCTCTTCGTGATCACCTCGGTGGCCTCTG...AAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR TCA 90 bp GAAATGTGCAAACCACCAGGCAAGCCGGTGGCAAAGTCCCCATTTGTCCTCAACGCCATCTCAGTTGGCTaGTACACGTTGCTTCTAAAC +
Preference number: 4 (lower is better)
Translates to: EMCKPPGKPVAKSPFVLNAISVG*YTLLLN
Trigger: GTTTAGAAGCAACGTGTATCAGCCAACTGAGATGGC...GTTGAGGACAAATGGGGACTTTGCCACCGGCTTGCCTGGTGGTTTGCACATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR TCA 90 bp GAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACAGGTGTCTTCCTGTGTaGCTTGGCGGAGCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: ERHSQGGKSVREILILWNRCLPV*LGGAVG
Trigger: CCCAACTGCTCCGCCAAGTCACACAGGAAGACACCT...GTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR TCA 90 bp TGGCTCTACAAGGGAAGGGGCGGGGCCTGTGTTCTCACCATAGACACTAGAGCATACAATGAGAGATTTTaGTCACAGATGCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: WLYKGRGGACVLTIDTRAYNERF*SQMLSS
Trigger: GGAGGAGAGCATCTGTGATCAAAATCTCTCATTGTA...TGCTCTAGTGTCTATGGTGAGAACACAGGCCCCGCCCCTTCCCTTGTAGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR GCA 90 bp CAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGCACAGCCTCGGGATGTaGTGGCGTTTTCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: QERHSQGGKSVREILILWHSLGM*WRFQRP
Trigger: TGGCCTCTGAAAACGCCAGCACATCCCGAGGCTGTG...CCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR GCA 90 bp TTTTCAGTTCGTCAGTGTTCACATTTACACGAAATCCCCTTGGCTAGGATTTCCCCGCCTCCACCACAATaGCCCAGATGGCGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: FSVRQCSHLHEIPLARISPPPPQ*PRWRPG
Trigger: ACCTGGACGCCATCTGGGGCATTGTGGTGGAGGCGG...GGAAATCCTAGCCAAGGGGATTTCGTGTAAATGTGAACACTGACGAACTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR GCA 90 bp GAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACCAGGCATCCCCCTGCTaGAGCTTGACATTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: ERHSQGGKSVREILILWNQASPC*SLTLPK
Trigger: CTTCGGCAATGTCAAGCTGCAGCAGGGGGATGCCTG...GTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR GCA 90 bp CACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAAGGGGCTGGCAGAAGGGTaGAGTGGATCTCAGGGATGG +
Preference number: 4 (lower is better)
Translates to: HSQGGKSVREILILWNLKGLAEG*SGSQGW
Trigger: CCATCCCTGAGATCCACTGCACCCTTCTGCCAGCCC...CTTTAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR GCA 90 bp GAAATGTGCAAACCACCAGGCAAGCCGGTGGCAAAGTCCCCATTTGTCCTCAACCATGGCAGCCATTTGTaGTGTGCTCACCTTATATGC +
Preference number: 4 (lower is better)
Translates to: EMCKPPGKPVAKSPFVLNHGSHL*CAHLIC
Trigger: GCATATAAGGTGAGCACAGCACAAATGGCTGCCATG...GTTGAGGACAAATGGGGACTTTGCCACCGGCTTGCCTGGTGGTTTGCACATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CCA 90 bp CAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAAGTCAGCCTCGGGATGTGCTaGCGTTTTCAGAGGCCACCG +
Preference number: 4 (lower is better)
Translates to: QPGRQIGKRNSDSLELKVSLGMC*RFQRPP
Trigger: CGGTGGCCTCTGAAAACGCCAGCACATCCCGAGGCT...GACTTTAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR CCA 90 bp CTGGGGAAGCACGACTTTCCATGGCAGCCATTTGTGCTGTGCTCACCTTATATGCAACCAACACCAGTCTaGCCCACCAGCTGTGAATTT +
Preference number: 4 (lower is better)
Translates to: LGKHDFPWQPFVLCSPYMQPTPV*PTSCEF
Trigger: AAATTCACAGCTGGTGGGCCAGACTGGTGTTGGTTG...CATATAAGGTGAGCACAGCACAAATGGCTGCCATGGAAAGTCGTGCTTCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CCA 90 bp CACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAAGCTCCAAGAGGCTACCTaGGGTCCAGCACTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: HSQGGKSVREILILWNLKLQEAT*GPALAG
Trigger: CCCAGCAAGTGCTGGACCCCAGGTAGCCTCTTGGAG...CTTTAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp CCTCAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCGGAGGGGCTTTCAGCTaGAGACCCCATTGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: PQERHSQGGKSVREILILGGAFS*RPHWSS
Trigger: AGAGCTCCAATGGGGTCTCCAGCTGAAAGCCCCTCC...GAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp AAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTGCGGAAAACCTGCCGTaGTGCCTGCCTTCCAACCTG +
Preference number: 4 (lower is better)
Translates to: KTQPGRQIGKRNSDSLELAENLP*CLPSNL
Trigger: CAGGTTGGAAGGCAGGCACCACGGCAGGTTTTCCGC...AAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp CCCACCCTCATTTATACATTCCATGCCGTCAGGTTAAAACTCTGCTTTGAATCGGCGGAAAACCTGCCGTaGTGCCTGCCTTCCAACCTG +
Preference number: 4 (lower is better)
Translates to: PTLIYTFHAVRLKLCFESAENLP*CLPSNL
Trigger: CAGGTTGGAAGGCAGGCACCACGGCAGGTTTTCCGC...CGATTCAAAGCAGAGTTTTAACCTGACGGCATGGAATGTATAAATGAGGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR CAA 72 bp TCCAACCAACACCAGTCTGGCCCACCAGCTGTGAATTaGGTTCTGTTCTACCCCCAGAGGATGAAACAGTCT +
Preference number: 4 (lower is better)
Translates to: SNQHQSGPPAVN*VLFYPQRMKQS
Trigger: AGACTGTTTCATCCTCTGGGGGTAGAACAGAACCAAATTCACAGCTGGTGGGCCAGACTGGTGTTGGTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR TCA 90 bp ATGGCAGCCATTTGTGCTGTGCTCACCTTATATGCTTGGACAATAAAGAACTTATGTCACGCAGCACGGTaGGCACCAGCCACTCCACAG +
Preference number: 4 (lower is better)
Translates to: MAAICAVLTLYAWTIKNLCHAAR*APATPQ
Trigger: CTGTGGAGTGGCTGGTGCTCACCGTGCTGCGTGACA...TAAGTTCTTTATTGTCCAAGCATATAAGGTGAGCACAGCACAAATGGCTGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR TCA 90 bp AGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACCCCCTGCTGCAGCTTaGCATTGCCGAAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: RKTQPGRQIGKRNSDSLEPPAAA*HCRRGT
Trigger: TGTACCTCTTCGGCAATGTCAAGCTGCAGCAGGGGG...TTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR TCA 90 bp AAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTCCCCCTGCTGCAGCTTaGCATTGCCGAAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: KTQPGRQIGKRNSDSLELPPAAA*HCRRGT
Trigger: TGTACCTCTTCGGCAATGTCAAGCTGCAGCAGGGGG...AAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR TCA 90 bp CAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAAGTCCCCCCTGCTGCAGCTTaGCATTGCCGAAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: QPGRQIGKRNSDSLELKVPPAAA*HCRRGT
Trigger: TGTACCTCTTCGGCAATGTCAAGCTGCAGCAGGGGG...GACTTTAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR TCA 90 bp TCAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGAGGTGTCTTCCTGTGTaGCTTGGCGGAGCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: SRKTQPGRQIGKRNSDSLRCLPV*LGGAVG
Trigger: CCCAACTGCTCCGCCAAGTCACACAGGAAGACACCT...CAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR TCA 90 bp CAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGTCTACCCCCAGAGGATaGAACAGTCTTCCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: QERHSQGGKSVREILILWSTPRG*NSLPSH
Trigger: GTGGCTGGGAAGACTGTTTCATCCTCTGGGGGTAGA...CCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR TCA 90 bp TGCTTTAGTTTGCGGGGATTGAGGTTGGTCTGGTATTACGTGTCTGTGTGTGTGCTGGCCCACCAGCTGTaGATTTGGTTCTGTTCTACC +
Preference number: 4 (lower is better)
Translates to: CFSLRGLRLVWYYVSVCVLAHQL*IWFCST
Trigger: GGTAGAACAGAACCAAATTCACAGCTGGTGGGCCAG...CACACACACAGACACGTAATACCAGACCAACCTCAATCCCCGCAAACTAAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR TCA 90 bp AGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAGACGTACTGGCTTATaGAGCGGTCAGTCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: RHSQGGKSVREILILWNLRRTGL*SGQSSP
Trigger: GGGGGAGGACTGACCGCTTCATAAGCCAGTACGTCT...TAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR TCA 90 bp GAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACACTTGGGGTTTGGCCTaGGGCGTTCAACTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: ERHSQGGKSVREILILWNTWGLA*GVQLSL
Trigger: AAGGCTGAGTTGAACGCCTCAGGCCAAACCCCAAGT...GTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR GCA 90 bp CACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAAGCAGGCATCCCCCTGCTaGAGCTTGACATTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: HSQGGKSVREILILWNLKQASPC*SLTLPK
Trigger: CTTCGGCAATGTCAAGCTGCAGCAGGGGGATGCCTG...CTTTAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR GCA 90 bp CAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAAGTCTTCCAGGCATCCCCCTaGTGCAGCTTGACATTGCCG +
Preference number: 4 (lower is better)
Translates to: QPGRQIGKRNSDSLELKVFQASP*CSLTLP
Trigger: CGGCAATGTCAAGCTGCAGCAGGGGGATGCCTGGAA...GACTTTAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR GCA 90 bp TCAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGTTCCAGGCATCCCCCTaGTGCAGCTTGACATTGCCG +
Preference number: 4 (lower is better)
Translates to: SRKTQPGRQIGKRNSDSLFQASP*CSLTLP
Trigger: CGGCAATGTCAAGCTGCAGCAGGGGGATGCCTGGAA...CAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR GCA 90 bp CAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAAGTCGAAAACCTGCCGTGGTaGCTGCCTTCCAACCTGCCT +
Preference number: 4 (lower is better)
Translates to: QPGRQIGKRNSDSLELKVENLPW*LPSNLP
Trigger: AGGCAGGTTGGAAGGCAGGCACCACGGCAGGTTTTC...GACTTTAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR GCA 90 bp GGTGTTAGCTTTTCAGTTCGTCAGTGTTCACATTTACACGAAATCCCCTTGGCTGAAAACCTGCCGTGGTaGCTGCCTTCCAACCTGCCT +
Preference number: 4 (lower is better)
Translates to: GVSFSVRQCSHLHEIPLAENLPW*LPSNLP
Trigger: AGGCAGGTTGGAAGGCAGGCACCACGGCAGGTTTTC...AGCCAAGGGGATTTCGTGTAAATGTGAACACTGACGAACTGAAAAGCTAACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR GCA 90 bp TGGCTCTACAAGGGAAGGGGCGGGGCCTGTGTTCTCACCATAGACACTAGAGCAGTCAGGTTAAAACTCTaGTTTGAATCGATGCTAGAG +
Preference number: 4 (lower is better)
Translates to: WLYKGRGGACVLTIDTRAVRLKL*FESMLE
Trigger: CTCTAGCATCGATTCAAAGCAGAGTTTTAACCTGAC...TGCTCTAGTGTCTATGGTGAGAACACAGGCCCCGCCCCTTCCCTTGTAGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR GCA 90 bp TCAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGCTAGAAGCAAGCACATaGTCTGGGCAGAGGCGGGGT +
Preference number: 4 (lower is better)
Translates to: SRKTQPGRQIGKRNSDSLLEAST*SGQRRG
Trigger: ACCCCGCCTCTGCCCAGAGCATGTGCTTGCTTCTAG...CAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR GCA 90 bp ACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAAATCGATCCCGCCCGGTaGCTCTCGAAGTCACCAACG +
Preference number: 4 (lower is better)
Translates to: TQPGRQIGKRNSDSLELKIDPAR*LSKSPT
Trigger: CGTTGGTGACTTCGAGAGGCACCGGGCGGGATCGAT...TTTAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569847.1
CDS-3UTR CCA 90 bp ACCCTCATTTATACATTCCATGCCGTCAGGTTAAAACTCTGCTTTGAATCGATGCCACAATGCCCCAGATaGCGTCCAGGTCGCACAGGG +
Preference number: 4 (lower is better)
Translates to: TLIYTFHAVRLKLCFESMPQCPR*RPGRTG
Trigger: CCCTGTGCGACCTGGACGCCATCTGGGGCATTGTGG...CATCGATTCAAAGCAGAGTTTTAACCTGACGGCATGGAATGTATAAATGAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp TCCATTCCATCCAGGAATTTTCACCATAGCAACGGAAAGGACCCGAGGTGTCACATGGTCTCGTCCTCCTaGATGATGAAGGCAAACGTC +
Preference number: 4 (lower is better)
Translates to: SIPSRNFHHSNGKDPRCHMVSSS*MMKANV
Trigger: GACGTTTGCCTTCATCATCCAGGAGGACGAGACCAT...GTGACACCTCGGGTCCTTTCCGTTGCTATGGTGAAAATTCCTGGATGGAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp CCCACCCTCATTTATACATTCCATGCCGTCAGGTTAAAACTCTGCTTTGAATCGCCATCACAAAGTCCATaGGCTCGTAGGCGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PTLIYTFHAVRLKLCFESPSQSP*ARRRRL
Trigger: CAGCCTGCGCCTACGAGCCCATGGACTTTGTGATGG...CGATTCAAAGCAGAGTTTTAACCTGACGGCATGGAATGTATAAATGAGGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp TCAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGCCATCACAAAGTCCATaGGCTCGTAGGCGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SRKTQPGRQIGKRNSDSLPSQSP*ARRRRL
Trigger: CAGCCTGCGCCTACGAGCCCATGGACTTTGTGATGG...CAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR CCA 90 bp AGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAAGTTCTCCTGCAGGGCTaGCAGAAGGGTGCAGTGGAT +
Preference number: 4 (lower is better)
Translates to: RKTQPGRQIGKRNSDSLEVLLQG*QKGAVD
Trigger: ATCCACTGCACCCTTCTGCCAGCCCTGCAGGAGAAC...TTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR CCA 90 bp CCTCAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCACGTGTCGAAGTAGTTaGGCGTGTTCTCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PQERHSQGGKSVREILILTCRSS*ACSPAG
Trigger: CCCTGCAGGAGAACACGCCCAACTACTTCGACACGT...GAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR CCA 90 bp GAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTCCCCAAGCTGCCACTaGGTCTTTTTCCCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: ERHSQGGKSVREILILWNSPSCH*VFFPSC
Trigger: GCAGCTTGGGAAAAAGACCCAGTGGCAGCTTGGGGA...GTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR CCA 90 bp GAAATGTGCAAACCACCAGGCAAGCCGGTGGCAAAGTCCCCATTTGTCCTCAACGGATTGAGGTTGGTCTaGTATTACGTGTCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: EMCKPPGKPVAKSPFVLNGLRLV*YYVSVC
Trigger: ACACACAGACACGTAATACCAGACCAACCTCAATCC...GTTGAGGACAAATGGGGACTTTGCCACCGGCTTGCCTGGTGGTTTGCACATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp ACATGCCAGGGTCCCTCCACCTCTACTGGCTATAAAGCTCACCCCACGATTCAGCAGAAACAATGGGCTTaGAAAAGGGCTGTTTTCATG +
Preference number: 4 (lower is better)
Translates to: TCQGPSTSTGYKAHPTIQQKQWA*KRAVFM
Trigger: CATGAAAACAGCCCTTTTCCAAGCCCATTGTTTCTG...CTGAATCGTGGGGTGAGCTTTATAGCCAGTAGAGGTGGAGGGACCCTGGCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp CTTTCCATGGCAGCCATTTGTGCTGTGCTCACCTTATATGCTTGGACAATAAAGCGTTCAACTCAGCCTTaGCCAACCGAGACCACCACC +
Preference number: 4 (lower is better)
Translates to: LSMAAICAVLTLYAWTIKRSTQP*PTETTT
Trigger: GGTGGTGGTCTCGGTTGGCCAAGGCTGAGTTGAACG...CTTTATTGTCCAAGCATATAAGGTGAGCACAGCACAAATGGCTGCCATGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CCA 90 bp GCAGCGAGAGGTCATCTCTGCATCCTAGTGGGAACCCCTGAAGCCCTGCTAGGTAGAACTCCTGTAAGCTaGTATCATCATTGCATCATT +
Preference number: 4 (lower is better)
Translates to: AARGHLCILVGTPEALLGRTPVS*YHHCII
Trigger: AATGATGCAATGATGATACCAGCTTACAGGAGTTCT...ACCTAGCAGGGCTTCAGGGGTTCCCACTAGGATGCAGAGATGACCTCTCGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CCA 90 bp CCTCAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTCCGTTTACGCACACTaGGACCAACACCCGCTTCCT +
Preference number: 4 (lower is better)
Translates to: PQERHSQGGKSVREILILSVYAH*DQHPLP
Trigger: AGGAAGCGGGTGTTGGTCCCAGTGTGCGTAAACGGA...GAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569847.1
CDS-3UTR CCA 90 bp CAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGCAGGCAGGTTCCTCCTaGACACACTCTTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: QERHSQGGKSVREILILWQAGSS*THSSLS
Trigger: GGAGAGAGAAGAGTGTGTCCAGGAGGAACCTGCCTG...CCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569847.1
3UTR CAA 72 bp ATGCTCTCCTCCCGGGTCGTTTTCCCCAAACGAGTCTaGTTTACACACGCAGATCTTAAACAGAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: MLSSRVVFPKRV*FTHADLKQRCH
Trigger: ATGGCACCTCTGTTTAAGATCTGCGTGTGTAAACAAGACTCGTTTGGGGAAAACGACCCGGGAGGAGAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR TCA 90 bp TCAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGTCTACCCCCAGAGGATaGAACAGTCTTCCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: SRKTQPGRQIGKRNSDSLSTPRG*NSLPSH
Trigger: GTGGCTGGGAAGACTGTTTCATCCTCTGGGGGTAGA...CAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR TCA 90 bp TCTTATGCTGGGGAAGCACGACTTTCCATGGCAGCCATTTGTGCTGTGCTCACCATCACTTTCCAAATGTaGTGGTCACTTCATCACCCA +
Preference number: 4 (lower is better)
Translates to: SYAGEARLSMAAICAVLTITFQM*WSLHHP
Trigger: TGGGTGATGAAGTGACCATCACATTTGGAAAGTGAT...GGTGAGCACAGCACAAATGGCTGCCATGGAAAGTCGTGCTTCCCCAGCATAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR TCA 90 bp TCAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGAGGTGTCACTGCTTGTaGGGCAGCGAGAGGTCATCT +
Preference number: 4 (lower is better)
Translates to: SRKTQPGRQIGKRNSDSLRCHCL*GSERSS
Trigger: AGATGACCTCTCGCTGCCTCACAAGCAGTGACACCT...CAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR TCA 90 bp TGTGAATTTGGTTCTGTTCTACCCCCAGAGGATGAAACAGTCTTCCCAGCCACAAGAACATGGGGGCTTTaGATGGCCGAGATGTTCGAA +
Preference number: 4 (lower is better)
Translates to: CEFGSVLPPEDETVFPATRTWGL*MAEMFE
Trigger: TTCGAACATCTCGGCCATTCAAAGCCCCCATGTTCT...TGTGGCTGGGAAGACTGTTTCATCCTCTGGGGGTAGAACAGAACCAAATTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR TCA 90 bp TCCATTCCATCCAGGAATTTTCACCATAGCAACGGAAAGGACCCGAGGTGTCACTTTCTGTCCACGCAATaGCTGGAACGGGATTCTCTA +
Preference number: 4 (lower is better)
Translates to: SIPSRNFHHSNGKDPRCHFLSTQ*LERDSL
Trigger: TAGAGAATCCCGTTCCAGTCATTGCGTGGACAGAAA...GTGACACCTCGGGTCCTTTCCGTTGCTATGGTGAAAATTCCTGGATGGAATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR GCA 90 bp CCTCAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCGCCGTTGGGAAATCCTaGTGTTCGGAGAGCTGCATT +
Preference number: 4 (lower is better)
Translates to: PQERHSQGGKSVREILILAVGKS*CSESCI
Trigger: AATGCAGCTCTCCGAACAGCAGGATTTCCCAACGGC...GAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR GCA 90 bp AGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAGCGAGAGGTCATCTCTaGATCCTAGTGGGAACCCCT +
Preference number: 4 (lower is better)
Translates to: RHSQGGKSVREILILWNLARGHL*ILVGTP
Trigger: AGGGGTTCCCACTAGGATGCAGAGATGACCTCTCGC...TAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR GCA 90 bp TGCTTTAGTTTGCGGGGATTGAGGTTGGTCTGGTATTACGTGTCTGTGTGTGTGATGCTGGCCAAACAGTaGAGAGAACATGGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: CFSLRGLRLVWYYVSVCVMLAKQ*REHGGF
Trigger: AAAGCCCCCATGTTCTCTGCACTGTTTGGCCAGCAT...CACACACACAGACACGTAATACCAGACCAACCTCAATCCCCGCAAACTAAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR GCA 90 bp CAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAAGTCTACGCACATGTCCACTaGCCTTCAGGGCTCACACAC +
Preference number: 4 (lower is better)
Translates to: QPGRQIGKRNSDSLELKVYAHVH*PSGLTH
Trigger: GTGTGTGAGCCCTGAAGGGCAGTGGACATGTGCGTA...GACTTTAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569847.1
CDS-3UTR CCA 90 bp CCCACCCTCATTTATACATTCCATGCCGTCAGGTTAAAACTCTGCTTTGAATCGGGGTCCAGCACTTGCTaGGGAGAGGTGATAAGAGTG +
Preference number: 4 (lower is better)
Translates to: PTLIYTFHAVRLKLCFESGSSTC*GEVIRV
Trigger: CACTCTTATCACCTCTCCCCAGCAAGTGCTGGACCC...CGATTCAAAGCAGAGTTTTAACCTGACGGCATGGAATGTATAAATGAGGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp AGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAAGGGTCCAGCACTTGCTaGGGAGAGGTGATAAGAGTG +
Preference number: 4 (lower is better)
Translates to: RKTQPGRQIGKRNSDSLEGSSTC*GEVIRV
Trigger: CACTCTTATCACCTCTCCCCAGCAAGTGCTGGACCC...TTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp AGCAACAAGAAACCCTCATGTGATCCATTCCATCCAGGAATTTTCACCATAGCACACCAGGCAAGCCGGTaGCAAAGTCCCCATTTGTCC +
Preference number: 4 (lower is better)
Translates to: SNKKPSCDPFHPGIFTIAHQASR*QSPHLS
Trigger: GGACAAATGGGGACTTTGCCACCGGCTTGCCTGGTG...TGCTATGGTGAAAATTCCTGGATGGAATGGATCACATGAGGGTTTCTTGTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
3UTR CAA 72 bp CATTGGATTATAAAAGCCACAATGCTCCCTTTCAACTaGGGGTTTGGCCTGAGGCGTTCAACTCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: HWIIKATMLPFN*GFGLRRSTQPW
Trigger: CCAAGGCTGAGTTGAACGCCTCAGGCCAAACCCCAAGTTGAAAGGGAGCATTGTGGCTTTTATAATCCAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR TCA 90 bp CCCTCAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTGTACCATGTCGTAGATaGGGGCCATCACAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: PSRKTQPGRQIGKRNSDSVPCRR*GPSQSP
Trigger: TGGACTTTGTGATGGCCCTCATCTACGACATGGTAC...AGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR TCA 90 bp AGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTACTGGCCCACCAGCTGTaGATTTGGTTCTGTTCTACC +
Preference number: 4 (lower is better)
Translates to: RHSQGGKSVREILILWNLLAHQL*IWFCST
Trigger: GGTAGAACAGAACCAAATTCACAGCTGGTGGGCCAG...TAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR TCA 90 bp CTATGGCTCTACAAGGGAAGGGGCGGGGCCTGTGTTCTCACCATAGACACTAGAGTTAAAACTCTGCTTTaGATCGATGCTAGAGGTTAT +
Preference number: 4 (lower is better)
Translates to: LWLYKGRGGACVLTIDTRVKTLL*IDARGY
Trigger: ATAACCTCTAGCATCGATTCAAAGCAGAGTTTTAAC...TCTAGTGTCTATGGTGAGAACACAGGCCCCGCCCCTTCCCTTGTAGAGCCATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR TCA 90 bp TGCCTCCCGGAGGGGCTTTCAGCTGGAGACCCCATTGGAGCTCTTGAAATGAATATTATCTATCAAAAGTaGGCCTTAGCTCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: CLPEGLSAGDPIGALEMNIIYQK*ALALHQ
Trigger: CTGATGAAGAGCTAAGGCTCACTTTTGATAGATAAT...ATTCATTTCAAGAGCTCCAATGGGGTCTCCAGCTGAAAGCCCCTCCGGGAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR GCA 90 bp CCCTCAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTGTCTTTTTCCCAAGCTaGCGTTGGGAAATCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PSRKTQPGRQIGKRNSDSVFFPS*RWEILL
Trigger: CAGCAGGATTTCCCAACGGCAGCTTGGGAAAAAGAC...AGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTGAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR GCA 90 bp CCCTCAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTAAGGGAAGAAGGGACTaGTGCCCCAAGCCAGAATAT +
Preference number: 4 (lower is better)
Translates to: PSRKTQPGRQIGKRNSDSKGRRD*CPKPEY
Trigger: ATATTCTGGCTTGGGGCAGCAGTCCCTTCTTCCCTT...AGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR GCA 90 bp TCTTATGCTGGGGAAGCACGACTTTCCATGGCAGCCATTTGTGCTGTGCTCACCACTTGTGGCCGCCTTTaGAAAGATCCATATTCTAAT +
Preference number: 4 (lower is better)
Translates to: SYAGEARLSMAAICAVLTTCGRL*KDPYSN
Trigger: ATTAGAATATGGATCTTTGCAAAGGCGGCCACAAGT...GGTGAGCACAGCACAAATGGCTGCCATGGAAAGTCGTGCTTCCCCAGCATAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR GCA 90 bp ACATGCCAGGGTCCCTCCACCTCTACTGGCTATAAAGCTCACCCCACGATTCAGCAAGGAATACAGAAGTaGTCTTATTACCAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: TCQGPSTSTGYKAHPTIQQGIQK*SYYQFS
Trigger: GGAAAACTGGTAATAAGAGCACTTCTGTATTCCTTG...CTGAATCGTGGGGTGAGCTTTATAGCCAGTAGAGGTGGAGGGACCCTGGCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR GCA 90 bp AAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTCTTCTCTCTCCTCACTaGCCAACTCCCAGATGTCGT +
Preference number: 4 (lower is better)
Translates to: KTQPGRQIGKRNSDSLELLLSPH*PTPRCR
Trigger: ACGACATCTGGGAGTTGGGCAGTGAGGAGAGAGAAG...AAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569847.1
CDS-3UTR CCA 90 bp CCTCAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCATGGTCTCGTCCTCCTaGATGATGAAGGCAAACGTC +
Preference number: 4 (lower is better)
Translates to: PQERHSQGGKSVREILILMVSSS*MMKANV
Trigger: GACGTTTGCCTTCATCATCCAGGAGGACGAGACCAT...GAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR CCA 90 bp ATGGCAGCCATTTGTGCTGTGCTCACCTTATATGCTTGGACAATAAAGAACTTACCATCACAAAGTCCATaGGCTCGTAGGCGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: MAAICAVLTLYAWTIKNLPSQSP*ARRRRL
Trigger: CAGCCTGCGCCTACGAGCCCATGGACTTTGTGATGG...TAAGTTCTTTATTGTCCAAGCATATAAGGTGAGCACAGCACAAATGGCTGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CCA 90 bp GGTGTTAGCTTTTCAGTTCGTCAGTGTTCACATTTACACGAAATCCCCTTGGCTATCTCAGGGATGGCGTaGAAGATGACGAAGACCCAG +
Preference number: 4 (lower is better)
Translates to: GVSFSVRQCSHLHEIPLAISGMA*KMTKTQ
Trigger: CTGGGTCTTCGTCATCTTCCACGCCATCCCTGAGAT...AGCCAAGGGGATTTCGTGTAAATGTGAACACTGACGAACTGAAAAGCTAACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp CACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAAGATCTCAGGGATGGCGTaGAAGATGACGAAGACCCAG +
Preference number: 4 (lower is better)
Translates to: HSQGGKSVREILILWNLKISGMA*KMTKTQ
Trigger: CTGGGTCTTCGTCATCTTCCACGCCATCCCTGAGAT...CTTTAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR CCA 90 bp CACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAAGTTCCCAAGCTGCCGTTaGGAAATCCTGCTGTTCGGA +
Preference number: 4 (lower is better)
Translates to: HSQGGKSVREILILWNLKFPSCR*EILLFG
Trigger: TCCGAACAGCAGGATTTCCCAACGGCAGCTTGGGAA...CTTTAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR CCA 90 bp AGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTATTCCCAAGCTGCCGTTaGGAAATCCTGCTGTTCGGA +
Preference number: 4 (lower is better)
Translates to: RHSQGGKSVREILILWNLFPSCR*EILLFG
Trigger: TCCGAACAGCAGGATTTCCCAACGGCAGCTTGGGAA...TAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR CCA 90 bp TTTTCAGTTCGTCAGTGTTCACATTTACACGAAATCCCCTTGGCTAGGATTTCCTCCCCAAGCTGCCACTaGGTCTTTTTCCCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: FSVRQCSHLHEIPLARISSPSCH*VFFPSC
Trigger: GCAGCTTGGGAAAAAGACCCAGTGGCAGCTTGGGGA...GGAAATCCTAGCCAAGGGGATTTCGTGTAAATGTGAACACTGACGAACTGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp AGCAACAAGAAACCCTCATGTGATCCATTCCATCCAGGAATTTTCACCATAGCATCCCCAAGCTGCCACTaGGTCTTTTTCCCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: SNKKPSCDPFHPGIFTIASPSCH*VFFPSC
Trigger: GCAGCTTGGGAAAAAGACCCAGTGGCAGCTTGGGGA...TGCTATGGTGAAAATTCCTGGATGGAATGGATCACATGAGGGTTTCTTGTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp AAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTTCTTCCTGTGTGACTTaGCGGAGCAGTTGGGATGGT +
Preference number: 4 (lower is better)
Translates to: KTQPGRQIGKRNSDSLELSSCVT*RSSWDG
Trigger: ACCATCCCAACTGCTCCGCCAAGTCACACAGGAAGA...AAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR CCA 90 bp CTGGGGAAGCACGACTTTCCATGGCAGCCATTTGTGCTGTGCTCACCTTATATGAATTGGGAGAGGATTTaGAGATACACCCGTAAGTGT +
Preference number: 4 (lower is better)
Translates to: LGKHDFPWQPFVLCSPYMNWERI*RYTRKC
Trigger: ACACTTACGGGTGTATCTCCAAATCCTCTCCCAATT...CATATAAGGTGAGCACAGCACAAATGGCTGCCATGGAAAGTCGTGCTTCCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CCA 90 bp GAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACCAGTTTTCCCACTTGTaGCCGCCTTTGCAAAGATCC +
Preference number: 4 (lower is better)
Translates to: ERHSQGGKSVREILILWNQFSHL*PPLQRS
Trigger: GGATCTTTGCAAAGGCGGCCACAAGTGGGAAAACTG...GTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR TCA 90 bp TCAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGTACCATGTCGTAGATaGGGGCCATCACAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: SRKTQPGRQIGKRNSDSLVPCRR*GPSQSP
Trigger: TGGACTTTGTGATGGCCCTCATCTACGACATGGTAC...CAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR TCA 90 bp CCCTCAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTGCCATCTCAGTTGGCTaGTACACGTTGCTTCTAAAC +
Preference number: 4 (lower is better)
Translates to: PSRKTQPGRQIGKRNSDSAISVG*YTLLLN
Trigger: GTTTAGAAGCAACGTGTATCAGCCAACTGAGATGGC...AGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR TCA 90 bp ACCCTCATTTATACATTCCATGCCGTCAGGTTAAAACTCTGCTTTGAATCGATGAGGTGTCACTGCTTGTaGGGCAGCGAGAGGTCATCT +
Preference number: 4 (lower is better)
Translates to: TLIYTFHAVRLKLCFESMRCHCL*GSERSS
Trigger: AGATGACCTCTCGCTGCCTCACAAGCAGTGACACCT...CATCGATTCAAAGCAGAGTTTTAACCTGACGGCATGGAATGTATAAATGAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR TCA 90 bp CCCTCAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTTCTCATCTTTCTCTCTaGTGCCACGAACATTCGAGG +
Preference number: 4 (lower is better)
Translates to: PSRKTQPGRQIGKRNSDSSHLSL*CHEHSR
Trigger: CCTCGAATGTTCGTGGCATCAGAGAGAAAGATGAGA...AGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569847.1
CDS-3UTR GCA 90 bp AGCAACAAGAAACCCTCATGTGATCCATTCCATCCAGGAATTTTCACCATAGCAGCCGTTGGGAAATCCTaGTGTTCGGAGAGCTGCATT +
Preference number: 4 (lower is better)
Translates to: SNKKPSCDPFHPGIFTIAAVGKS*CSESCI
Trigger: AATGCAGCTCTCCGAACAGCAGGATTTCCCAACGGC...TGCTATGGTGAAAATTCCTGGATGGAATGGATCACATGAGGGTTTCTTGTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR GCA 90 bp CAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAAGTCGTCTTTTTCCCAAGCTaGCGTTGGGAAATCCTGCTG +
Preference number: 4 (lower is better)
Translates to: QPGRQIGKRNSDSLELKVVFFPS*RWEILL
Trigger: CAGCAGGATTTCCCAACGGCAGCTTGGGAAAAAGAC...GACTTTAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR GCA 90 bp CTGGGGAAGCACGACTTTCCATGGCAGCCATTTGTGCTGTGCTCACCTTATATGGTCAGGTTAAAACTCTaGTTTGAATCGATGCTAGAG +
Preference number: 4 (lower is better)
Translates to: LGKHDFPWQPFVLCSPYMVRLKL*FESMLE
Trigger: CTCTAGCATCGATTCAAAGCAGAGTTTTAACCTGAC...CATATAAGGTGAGCACAGCACAAATGGCTGCCATGGAAAGTCGTGCTTCCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR GCA 90 bp AGCAACAAGAAACCCTCATGTGATCCATTCCATCCAGGAATTTTCACCATAGCACCTTACTTTCCCCAGTaGTTTGCAAGGATGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SNKKPSCDPFHPGIFTIAPYFPQ*FARMGW
Trigger: CCACCCCATCCTTGCAAAGCACTGGGGAAAGTAAGG...TGCTATGGTGAAAATTCCTGGATGGAATGGATCACATGAGGGTTTCTTGTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CCA 90 bp AAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTATGGTCTCGTCCTCCTaGATGATGAAGGCAAACGTC +
Preference number: 4 (lower is better)
Translates to: KTQPGRQIGKRNSDSLELMVSSS*MMKANV
Trigger: GACGTTTGCCTTCATCATCCAGGAGGACGAGACCAT...AAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR CCA 90 bp ACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAATCTTCCTGTGTGACTTaGCGGAGCAGTTGGGATGGT +
Preference number: 4 (lower is better)
Translates to: TQPGRQIGKRNSDSLELKSSCVT*RSSWDG
Trigger: ACCATCCCAACTGCTCCGCCAAGTCACACAGGAAGA...TTTAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR CCA 90 bp TATAAAAGCCACAATGCTCCCTTTCAACTTGGGGTTTGGCCTGAGGCGTTCAACGGATTGAGGTTGGTCTaGTATTACGTGTCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: YKSHNAPFQLGVWPEAFNGLRLV*YYVSVC
Trigger: ACACACAGACACGTAATACCAGACCAACCTCAATCC...GTTGAACGCCTCAGGCCAAACCCCAAGTTGAAAGGGAGCATTGTGGCTTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CCA 90 bp CACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAAGCAACCAACACCAGTCTaGCCCACCAGCTGTGAATTT +
Preference number: 4 (lower is better)
Translates to: HSQGGKSVREILILWNLKQPTPV*PTSCEF
Trigger: AAATTCACAGCTGGTGGGCCAGACTGGTGTTGGTTG...CTTTAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp AGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTACATGGGGGCTTTGAATaGCCGAGATGTTCGAAATGC +
Preference number: 4 (lower is better)
Translates to: RHSQGGKSVREILILWNLHGGFE*PRCSKC
Trigger: GCATTTCGAACATCTCGGCCATTCAAAGCCCCCATG...TAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp TCAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGTCAGCTCAGACGTACTaGCTTATGAAGCGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: SRKTQPGRQIGKRNSDSLSAQTY*LMKRSV
Trigger: GACTGACCGCTTCATAAGCCAGTACGTCTGAGCTGA...CAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp CTTTCCATGGCAGCCATTTGTGCTGTGCTCACCTTATATGCTTGGACAATAAAGAAGCACGACTTTCCATaGCAGCCATTTGTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: LSMAAICAVLTLYAWTIKKHDFP*QPFVLC
Trigger: GCACAGCACAAATGGCTGCCATGGAAAGTCGTGCTT...CTTTATTGTCCAAGCATATAAGGTGAGCACAGCACAAATGGCTGCCATGGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CCA 90 bp CCTCAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTTTCAACTTGGGGTTTaGCCTGAGGCGTTCAACTCA +
Preference number: 4 (lower is better)
Translates to: PQERHSQGGKSVREILILFQLGV*PEAFNS
Trigger: TGAGTTGAACGCCTCAGGCCAAACCCCAAGTTGAAA...GAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR CAA 72 bp TCAGTTCGTCAGTGTTCACATTTACACGAAATCCCCTaGGCTAGGATTTCCAAATTTCCTGGCTGTGAGGCG +
Preference number: 4 (lower is better)
Translates to: SVRQCSHLHEIP*ARISKFPGCEA
Trigger: CGCCTCACAGCCAGGAAATTTGGAAATCCTAGCCAAGGGGATTTCGTGTAAATGTGAACACTGACGAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR TCA 90 bp AAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTTTAGTTTGCGGGGATTaGGGTTGGTCTGGTATTACG +
Preference number: 4 (lower is better)
Translates to: KTQPGRQIGKRNSDSLELLVCGD*GWSGIT
Trigger: CGTAATACCAGACCAACCTCAATCCCCGCAAACTAA...AAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR TCA 90 bp TGTGAATTTGGTTCTGTTCTACCCCCAGAGGATGAAACAGTCTTCCCAGCCACAATCACTTTCCAAATGTaGTGGTCACTTCATCACCCA +
Preference number: 4 (lower is better)
Translates to: CEFGSVLPPEDETVFPATITFQM*WSLHHP
Trigger: TGGGTGATGAAGTGACCATCACATTTGGAAAGTGAT...TGTGGCTGGGAAGACTGTTTCATCCTCTGGGGGTAGAACAGAACCAAATTCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR TCA 90 bp CCCTCAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCAAGAAACCCTCATGTaGTCCATTCCATCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: PSRKTQPGRQIGKRNSDSQETLM*SIPSRN
Trigger: ATTCCTGGATGGAATGGATCACATGAGGGTTTCTTG...AGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR TCA 90 bp TTTGATCACAGATGCTCTCCTCCCGGGTCGTTTTCCCCAAACGAGTCTTGTTTAAAAGGTCTCATTAAATaGGGCTTCCCATGGCTCAAA +
Preference number: 4 (lower is better)
Translates to: FDHRCSPPGSFSPNESCLKGLIK*GFPWLK
Trigger: TTTGAGCCATGGGAAGCCTCATTTAATGAGACCTTT...TAAACAAGACTCGTTTGGGGAAAACGACCCGGGAGGAGAGCATCTGTGATCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR TCA 90 bp CACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAAGTGCACTGGGTTGTTTTaGCAAGCTACCACACGTCTT +
Preference number: 4 (lower is better)
Translates to: HSQGGKSVREILILWNLKCTGLF*QATTRL
Trigger: AAGACGTGTGGTAGCTTGTCAAAACAACCCAGTGCA...CTTTAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR GCA 90 bp CCTCAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCGCGTTTTCTTCCCCATaGGTGGTAACACAAGGAAAT +
Preference number: 4 (lower is better)
Translates to: PQERHSQGGKSVREILILAFSSP*VVTQGN
Trigger: ATTTCCTTGTGTTACCACGCATGGGGAAGAAAACGC...GAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR GCA 90 bp CAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGCAGCCATTTGTGCTGTaGTCACCTTATATGCTTGGA +
Preference number: 4 (lower is better)
Translates to: QERHSQGGKSVREILILWQPFVL*SPYMLG
Trigger: TCCAAGCATATAAGGTGAGCACAGCACAAATGGCTG...CCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR GCA 90 bp AGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAAATGGCTCTGTTCTTATaGTGGGGAAGCACGACTTTC +
Preference number: 4 (lower is better)
Translates to: RKTQPGRQIGKRNSDSLEMALFL*WGSTTF
Trigger: GAAAGTCGTGCTTCCCCAGCATAAGAACAGAGCCAT...TTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CCA 90 bp AGCAACAAGAAACCCTCATGTGATCCATTCCATCCAGGAATTTTCACCATAGCATCAGCTCAGACGTACTaGCTTATGAAGCGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: SNKKPSCDPFHPGIFTIASAQTY*LMKRSV
Trigger: GACTGACCGCTTCATAAGCCAGTACGTCTGAGCTGA...TGCTATGGTGAAAATTCCTGGATGGAATGGATCACATGAGGGTTTCTTGTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp AGACACTTAAACCCAGACAGATGTAACAAAGGATTTTTGTTGTCTAAGTCCCAAGTGGGGGTGGCATTCTaGGGCCATGCGTTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: RHLNPDRCNKGFLLSKSQVGVAF*GHAFSS
Trigger: GGAAGAAAACGCATGGCCCCAGAATGCCACCCCCAC...TTGGGACTTAGACAACAAAAATCCTTTGTTACATCTGTCTGGGTTTAAGTGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CCA 90 bp TTTTCAGTTCGTCAGTGTTCACATTTACACGAAATCCCCTTGGCTAGGATTTCCCAACTCTGGAATCCCTaGAGATGCACAGAACTTCCC +
Preference number: 4 (lower is better)
Translates to: FSVRQCSHLHEIPLARISQLWNP*RCTELP
Trigger: GGGAAGTTCTGTGCATCTCCAGGGATTCCAGAGTTG...GGAAATCCTAGCCAAGGGGATTTCGTGTAAATGTGAACACTGACGAACTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CCA 90 bp CTTTCCATGGCAGCCATTTGTGCTGTGCTCACCTTATATGCTTGGACAATAAAGCCAGATCTTCAACTCTaGAATCCCTGGAGATGCACA +
Preference number: 4 (lower is better)
Translates to: LSMAAICAVLTLYAWTIKPDLQL*NPWRCT
Trigger: TGTGCATCTCCAGGGATTCCAGAGTTGAAGATCTGG...CTTTATTGTCCAAGCATATAAGGTGAGCACAGCACAAATGGCTGCCATGGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR TCA 90 bp ACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAATCTCATCTTTCTCTCTaGTGCCACGAACATTCGACC +
Preference number: 4 (lower is better)
Translates to: TQPGRQIGKRNSDSLELKSHLSL*CHEHST
Trigger: GGTCGAATGTTCGTGGCATCAGAGAGAAAGATGAGA...TTTAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR TCA 90 bp CAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAAGTCAATTGCTCCATCGTGTaGATGGTATCAGAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: QPGRQIGKRNSDSLELKVNCSIV*MVSESS
Trigger: GGAGCTTTCTGATACCATTCACACGATGGAGCAATT...GACTTTAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR GCA 90 bp AAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTTTCTCCCATTTAAAATaGCACAGACCGACCCTCAAG +
Preference number: 4 (lower is better)
Translates to: KTQPGRQIGKRNSDSLELFSHLK*HRPTLK
Trigger: CTTGAGGGTCGGTCTGTGGCATTTTAAATGGGAGAA...AAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CCA 90 bp CAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAAGTCGCTCCATCGTGTGAATaGTATCAGAAAGCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: QPGRQIGKRNSDSLELKVAPSCE*YQKAPK
Trigger: CTTTGGAGCTTTCTGATACCATTCACACGATGGAGC...GACTTTAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CCA 90 bp AGACACTTAAACCCAGACAGATGTAACAAAGGATTTTTGTTGTCTAAGTCCCAAACCCTCCACCTCCAGTaGGGAGAAATCCAGGCTAGA +
Preference number: 4 (lower is better)
Translates to: RHLNPDRCNKGFLLSKSQTLHLQ*GEIQAR
Trigger: TCTAGCCTGGATTTCTCCCCACTGGAGGTGGAGGGT...TTGGGACTTAGACAACAAAAATCCTTTGTTACATCTGTCTGGGTTTAAGTGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CCA 90 bp AGACACTTAAACCCAGACAGATGTAACAAAGGATTTTTGTTGTCTAAGTCCCAATTCACCCTTGTTCAGTaGGTCCTGACGGCATCTGGG +
Preference number: 4 (lower is better)
Translates to: RHLNPDRCNKGFLLSKSQFTLVQ*VLTASG
Trigger: CCCAGATGCCGTCAGGACCCACTGAACAAGGGTGAA...TTGGGACTTAGACAACAAAAATCCTTTGTTACATCTGTCTGGGTTTAAGTGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR CAA 72 bp GCACCTGCTGAGAACTCCTGTAAGCTGGTATCATCATaGCATCATTGGATTATAAAAGCCACAATGCTCCCT +
Preference number: 4 (lower is better)
Translates to: APAENSCKLVSS*HHWIIKATMLP
Trigger: AGGGAGCATTGTGGCTTTTATAATCCAATGATGCAATGATGATACCAGCTTACAGGAGTTCTCAGCAGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR TCA 90 bp ACCCTCATTTATACATTCCATGCCGTCAGGTTAAAACTCTGCTTTGAATCGATGGCCATCTCAGTTGGCTaGTACACGTTGCTTCTAAAC +
Preference number: 4 (lower is better)
Translates to: TLIYTFHAVRLKLCFESMAISVG*YTLLLN
Trigger: GTTTAGAAGCAACGTGTATCAGCCAACTGAGATGGC...CATCGATTCAAAGCAGAGTTTTAACCTGACGGCATGGAATGTATAAATGAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR TCA 90 bp CACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAAGCAGGACCGAGGTGTTTaGAGATTTCTTTCTTTTCAG +
Preference number: 4 (lower is better)
Translates to: HSQGGKSVREILILWNLKQDRGV*RFLSFQ
Trigger: CTGAAAAGAAAGAAATCTTCAAACACCTCGGTCCTG...CTTTAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR GCA 90 bp AGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAACAAAGGAATGACTTaGTCAGGACAGATGGAAACC +
Preference number: 4 (lower is better)
Translates to: RHSQGGKSVREILILWNLNKGMT*SGQMET
Trigger: GGTTTCCATCTGTCCTGAGCAAGTCATTCCTTTGTT...TAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR GCA 90 bp CACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAAGAACAAAGGAATGACTTaGTCAGGACAGATGGAAACC +
Preference number: 4 (lower is better)
Translates to: HSQGGKSVREILILWNLKNKGMT*SGQMET
Trigger: GGTTTCCATCTGTCCTGAGCAAGTCATTCCTTTGTT...CTTTAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp CCTCAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTACACGAAATCCCCTTaGCTAGGATTTCCAAATTTC +
Preference number: 4 (lower is better)
Translates to: PQERHSQGGKSVREILILYTKSP*LGFPNF
Trigger: GAAATTTGGAAATCCTAGCCAAGGGGATTTCGTGTA...GAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp CCCACCCTCATTTATACATTCCATGCCGTCAGGTTAAAACTCTGCTTTGAATCGAATTGGGAGAGGATTTaGAGATACACCCGTAAGTGT +
Preference number: 4 (lower is better)
Translates to: PTLIYTFHAVRLKLCFESNWERI*RYTRKC
Trigger: ACACTTACGGGTGTATCTCCAAATCCTCTCCCAATT...CGATTCAAAGCAGAGTTTTAACCTGACGGCATGGAATGTATAAATGAGGGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp TCAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGCAGAAACAATGGGCTTaGAAAAGGGCTGTTTTCATG +
Preference number: 4 (lower is better)
Translates to: SRKTQPGRQIGKRNSDSLQKQWA*KRAVFM
Trigger: CATGAAAACAGCCCTTTTCCAAGCCCATTGTTTCTG...CAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp ACCCTCATTTATACATTCCATGCCGTCAGGTTAAAACTCTGCTTTGAATCGATGGCTCTGTTCTTATGCTaGGGAAGCACGACTTTCCAT +
Preference number: 4 (lower is better)
Translates to: TLIYTFHAVRLKLCFESMALFLC*GSTTFH
Trigger: ATGGAAAGTCGTGCTTCCCCAGCATAAGAACAGAGC...CATCGATTCAAAGCAGAGTTTTAACCTGACGGCATGGAATGTATAAATGAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR TCA 90 bp ACCCTCATTTATACATTCCATGCCGTCAGGTTAAAACTCTGCTTTGAATCGATGCAAGAAACCCTCATGTaGTCCATTCCATCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: TLIYTFHAVRLKLCFESMQETLM*SIPSRN
Trigger: ATTCCTGGATGGAATGGATCACATGAGGGTTTCTTG...CATCGATTCAAAGCAGAGTTTTAACCTGACGGCATGGAATGTATAAATGAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR TCA 90 bp AGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACAGAGACTAGGGCCTTaGGAAATATCAAAAGGTTTA +
Preference number: 4 (lower is better)
Translates to: RKTQPGRQIGKRNSDSLEQRLGP*EISKGL
Trigger: TAAACCTTTTGATATTTCTCAAGGCCCTAGTCTCTG...TTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR GCA 90 bp TGCTTTAGTTTGCGGGGATTGAGGTTGGTCTGGTATTACGTGTCTGTGTGTGTGTGTGCTCACCTTATATaGTTGGACAATAAAGAACTT +
Preference number: 4 (lower is better)
Translates to: CFSLRGLRLVWYYVSVCVCAHLI*LDNKEL
Trigger: AAGTTCTTTATTGTCCAAGCATATAAGGTGAGCACA...CACACACACAGACACGTAATACCAGACCAACCTCAATCCCCGCAAACTAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR CAA 72 bp CATGGCAGCCATTTGTGCTGTGCTCACCTTATATGCTaGGACAATAAAGAACTTAGAAAACGAACGTGTGAA +
Preference number: 4 (lower is better)
Translates to: HGSHLCCAHLIC*DNKELRKRTCE
Trigger: TTCACACGTTCGTTTTCTAAGTTCTTTATTGTCCAAGCATATAAGGTGAGCACAGCACAAATGGCTGCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR TCA 90 bp ACCCTCATTTATACATTCCATGCCGTCAGGTTAAAACTCTGCTTTGAATCGATGGGCAAAGATGTCTCTTaGTACTTTTCAGGTGTAGTC +
Preference number: 4 (lower is better)
Translates to: TLIYTFHAVRLKLCFESMGKDVS*YFSGVV
Trigger: GACTACACCTGAAAAGTATCAAGAGACATCTTTGCC...CATCGATTCAAAGCAGAGTTTTAACCTGACGGCATGGAATGTATAAATGAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR TCA 90 bp ACCCTCATTTATACATTCCATGCCGTCAGGTTAAAACTCTGCTTTGAATCGATGTCTCATCTTTCTCTCTaGTGCCACGAACATTCTTTG +
Preference number: 4 (lower is better)
Translates to: TLIYTFHAVRLKLCFESMSHLSL*CHEHSL
Trigger: CAAAGAATGTTCGTGGCATCAGAGAGAAAGATGAGA...CATCGATTCAAAGCAGAGTTTTAACCTGACGGCATGGAATGTATAAATGAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569479.5
CDS-3UTR GCA 90 bp CCCACCCTCATTTATACATTCCATGCCGTCAGGTTAAAACTCTGCTTTGAATCGCATTTATACATTCCATaGCGTCAGGTTAAAACTCTG +
Preference number: 4 (lower is better)
Translates to: PTLIYTFHAVRLKLCFESHLYIP*RQVKTL
Trigger: CAGAGTTTTAACCTGACGGCATGGAATGTATAAATG...CGATTCAAAGCAGAGTTTTAACCTGACGGCATGGAATGTATAAATGAGGGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CCA 90 bp ACCCTCATTTATACATTCCATGCCGTCAGGTTAAAACTCTGCTTTGAATCGATGGCTGCTACAGTCTCTTaGCAAAGATGTCTCTTGATA +
Preference number: 4 (lower is better)
Translates to: TLIYTFHAVRLKLCFESMAATVS*QRCLLI
Trigger: TATCAAGAGACATCTTTGCCAAGAGACTGTAGCAGC...CATCGATTCAAAGCAGAGTTTTAACCTGACGGCATGGAATGTATAAATGAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR GCA 90 bp ACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAACATTTATACATTCCATaGCGTCAGGTTAAAACTCTG +
Preference number: 4 (lower is better)
Translates to: TQPGRQIGKRNSDSLELKHLYIP*RQVKTL
Trigger: CAGAGTTTTAACCTGACGGCATGGAATGTATAAATG...TTTAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR GCA 90 bp AGCAACAAGAAACCCTCATGTGATCCATTCCATCCAGGAATTTTCACCATAGCACCAGTCTTCACTTTCTaGATTATCCCCACATTTTAT +
Preference number: 4 (lower is better)
Translates to: SNKKPSCDPFHPGIFTIAPVFTF*IIPTFY
Trigger: ATAAAATGTGGGGATAATGCAGAAAGTGAAGACTGG...TGCTATGGTGAAAATTCCTGGATGGAATGGATCACATGAGGGTTTCTTGTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300571.7
3UTR CAA 72 bp TTGGACAATAAAGAACTTAGAAAACGAACGTGTGAATaGCTCCATCGTGTGAATGGTATCAGAAAGCTCCAA +
Preference number: 4 (lower is better)
Translates to: LDNKELRKRTCE*LHRVNGIRKLQ
Trigger: TTGGAGCTTTCTGATACCATTCACACGATGGAGCAATTCACACGTTCGTTTTCTAAGTTCTTTATTGTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR TCA 90 bp AGACACTTAAACCCAGACAGATGTAACAAAGGATTTTTGTTGTCTAAGTCCCAAGTTAAAACTCTGCTTTaGATCGATGCTAGAGGTTAT +
Preference number: 4 (lower is better)
Translates to: RHLNPDRCNKGFLLSKSQVKTLL*IDARGY
Trigger: ATAACCTCTAGCATCGATTCAAAGCAGAGTTTTAAC...TTGGGACTTAGACAACAAAAATCCTTTGTTACATCTGTCTGGGTTTAAGTGTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS GCA 90 bp CGCTCCACGCACGCCCGCCTGCGGGTCCAGCTTCACTGCAGCGCCTaGCAGAGTCGCTGCCGCGCGAGGCGCCCCCTGGCCCGGCCCGCG +
Preference number: 5 (lower is better)
Translates to: RSTHARLRVQLHCSA*QSRCRARRPLARPA
Trigger: CGCGGGCCGGGCCAGGGGGCGCCTCGCGCGGCAGCGACTCTGGCAGGCGCTGCAGTGAAGCTGGACCCGCAGGCGGGCGTGCGTGGAGCG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562469.5
CDS GCA 90 bp CTGCCCTTCAGGGCTCACACACTCAGCGGCCCGGGCCACTGGCCGTaGGCTCCGCAGACGGTCAGGGCACAGCCCGGACGCGTGTCCGCT +
Preference number: 5 (lower is better)
Translates to: LPFRAHTLSGPGHWP*APQTVRAQPGRVSA
Trigger: AGCGGACACGCGTCCGGGCTGTGCCCTGACCGTCTGCGGAGCGCACGGCCAGTGGCCCGGGCCGCTGAGTGTGTGAGCCCTGAAGGGCAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569847.1
CDS CCA 90 bp TGTCCACTGCCCTTCAGGGCTCACACACTCAGCGGCCCGGGCCACTaGCCGTGCGCTCCGCAGACGGTCAGGGCACAGCCCGGACGCGTG +
Preference number: 5 (lower is better)
Translates to: CPLPFRAHTLSGPGH*PCAPQTVRAQPGRV
Trigger: CACGCGTCCGGGCTGTGCCCTGACCGTCTGCGGAGCGCACGGCCAGTGGCCCGGGCCGCTGAGTGTGTGAGCCCTGAAGGGCAGTGGACA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569847.1
CDS GCA 90 bp ATGATGACTTGCACCAGCATCAGGCACAGCGCCAGGCCCACCAGCTaGCAGCCCGCGGGGCCCGTGCCATGCCGCACCAGCCTCCGCACG +
Preference number: 5 (lower is better)
Translates to: MMTCTSIRHSARPTS*QPAGPVPCRTSLRT
Trigger: CGTGCGGAGGCTGGTGCGGCATGGCACGGGCCCCGCGGGCTGGCAGCTGGTGGGCCTGGCGCTGTGCCTGATGCTGGTGCAAGTCATCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300571.7
ENST00000535671.5
ENST00000566822.1
ENST00000569479.5
ENST00000569847.1
CDS CCA 90 bp CCCGCGGCAGCTGCACGTCCTCCTCGAAGGCCGTCTCCCGCATCCTaGGCTGCGACGTGTCGAAGTAGTTGGGCGTGTTCTCCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: PAAAARPPRRPSPAS*AATCRSSWACSPAG
Trigger: CCCTGCAGGAGAACACGCCCAACTACTTCGACACGTCGCAGCCCAGGATGCGGGAGACGGCCTTCGAGGAGGACGTGCAGCTGCCGCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300571.7
ENST00000535671.5
ENST00000569479.5
ENST00000569847.1
CDS GCA 90 bp CCACCACCCCTACCGCACACATCACCCACGTACGCACATGTCCACTaGCCTTCAGGGCTCACACACTCAGCGGCCCGGGCCACTGGCCGT +
Preference number: 5 (lower is better)
Translates to: PPPLPHTSPTYAHVH*PSGLTHSAARATGR
Trigger: ACGGCCAGTGGCCCGGGCCGCTGAGTGTGTGAGCCCTGAAGGGCAGTGGACATGTGCGTACGTGGGTGATGTGTGCGGTAGGGGTGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569847.1
CDS GCA 90 bp TCACGCAGCACGGTGAGCACCAGCCACTCCACAGCGATGATGACTTaGACCAGCATCAGGCACAGCGCCAGGCCCACCAGCTGCCAGCCC +
Preference number: 5 (lower is better)
Translates to: SRSTVSTSHSTAMMT*TSIRHSARPTSCQP
Trigger: GGGCTGGCAGCTGGTGGGCCTGGCGCTGTGCCTGATGCTGGTGCAAGTCATCATCGCTGTGGAGTGGCTGGTGCTCACCGTGCTGCGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300571.7
ENST00000535671.5
ENST00000569479.5
ENST00000569847.1
CDS GCA 90 bp CACCAGCACCAGGTCCAGGACGCAGAGAGGATCGATCCCGCCCGGTaGCTCTCGAAGTCACCAACGCCCCGGTATACACCTAGGCGCACA +
Preference number: 5 (lower is better)
Translates to: HQHQVQDAERIDPAR*LSKSPTPRYTPRRT
Trigger: TGTGCGCCTAGGTGTATACCGGGGCGTTGGTGACTTCGAGAGGCACCGGGCGGGATCGATCCTCTCTGCGTCCTGGACCTGGTGCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564449.1
ENST00000569847.1
CDS GCA 90 bp GCCGCCAGCGTGATGGCCAAGGTGGGGTCGTTCCAGGCATCCCCCTaGTGCAGCTTGACATTGCCGAAGAGGTACATGGTCATCCAGGCC +
Preference number: 5 (lower is better)
Translates to: AASVMAKVGSFQASP*CSLTLPKRYMVIQA
Trigger: GGCCTGGATGACCATGTACCTCTTCGGCAATGTCAAGCTGCAGCAGGGGGATGCCTGGAACGACCCCACCTTGGCCATCACGCTGGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300571.7
ENST00000535671.5
ENST00000569479.5
ENST00000569847.1
CDS CCA 90 bp CGAAGGCCGTCTCCCGCATCCTGGGCTGCGACGTGTCGAAGTAGTTaGGCGTGTTCTCCTGCAGGGCTGGCAGAAGGGTGCAGTGGATCT +
Preference number: 5 (lower is better)
Translates to: RRPSPASWAATCRSS*ACSPAGLAEGCSGS
Trigger: AGATCCACTGCACCCTTCTGCCAGCCCTGCAGGAGAACACGCCCAACTACTTCGACACGTCGCAGCCCAGGATGCGGGAGACGGCCTTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300571.7
ENST00000535671.5
ENST00000569479.5
ENST00000569847.1
CDS GCA 90 bp GCCAGCGTGATGGCCAAGGTGGGGTCGTTCCAGGCATCCCCCTGCTaGAGCTTGACATTGCCGAAGAGGTACATGGTCATCCAGGCCACC +
Preference number: 5 (lower is better)
Translates to: ASVMAKVGSFQASPC*SLTLPKRYMVIQAT
Trigger: GGTGGCCTGGATGACCATGTACCTCTTCGGCAATGTCAAGCTGCAGCAGGGGGATGCCTGGAACGACCCCACCTTGGCCATCACGCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300571.7
ENST00000535671.5
ENST00000569479.5
ENST00000569847.1
CDS-3UTR CAA 90 bp GGTGCCTGCCTTCCAACCTGCCTCCCGGAGGGGCTTTCAGCTGGAGACCCCATTATGCTCCCTTTCAACTaGGGGTTTGGCCTGAGGCGT +
Preference number: 5 (lower is better)
Translates to: GACLPTCLPEGLSAGDPIMLPFN*GFGLRR
Trigger: ACGCCTCAGGCCAAACCCCAAGTTGAAAGGGAGCAT...AATGGGGTCTCCAGCTGAAAGCCCCTCCGGGAGGCAGGTTGGAAGGCAGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS CCA 90 bp ATGTCGTTGTCCGTTTACGCACACTGGGACCAACACCCGCTTCCTTaGCCCCTCGAAACACACACGTCCAGTCGGTGCACCCCTCACGTG +
Preference number: 5 (lower is better)
Translates to: MSLSVYAHWDQHPLP*PLETHTSSRCTPHV
Trigger: CACGTGAGGGGTGCACCGACTGGACGTGTGTGTTTCGAGGGGCCAAGGAAGCGGGTGTTGGTCCCAGTGTGCGTAAACGGACAACGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569847.1
CDS CCA 90 bp TCCTCACTGCCCAACTCCCAGATGTCGTTGTCCGTTTACGCACACTaGGACCAACACCCGCTTCCTTGGCCCCTCGAAACACACACGTCC +
Preference number: 5 (lower is better)
Translates to: SSLPNSQMSLSVYAH*DQHPLPWPLETHTS
Trigger: GGACGTGTGTGTTTCGAGGGGCCAAGGAAGCGGGTGTTGGTCCCAGTGTGCGTAAACGGACAACGACATCTGGGAGTTGGGCAGTGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569847.1
CDS-3UTR CAA 90 bp GAAACATACTCAGCTCAGACGTACTGGCTTATGAAGCGGTCAGTCCTCCCCCGGGGGATGGTCCCACCGTaGAGCACGACGGCCATCTCA +
Preference number: 5 (lower is better)
Translates to: ETYSAQTYWLMKRSVLPRGMVPP*STTAIS
Trigger: TGAGATGGCCGTCGTGCTCAACGGTGGGACCATCCC...CCGGGGGAGGACTGACCGCTTCATAAGCCAGTACGTCTGAGCTGAGTATGTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CAA 90 bp GCAGCGAGAGGTCATCTCTGCATCCTAGTGGGAACCCCTGAAGCCCTGCTAGGTCAGTTGGGCCTCACCTaGGAATCCCACCCACAACCT +
Preference number: 5 (lower is better)
Translates to: AARGHLCILVGTPEALLGQLGLT*ESHPQP
Trigger: AGGTTGTGGGTGGGATTCCAAGGTGAGGCCCAACTG...ACCTAGCAGGGCTTCAGGGGTTCCCACTAGGATGCAGAGATGACCTCTCGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS TCA 90 bp GCCACCGAGGTGATCACGAAGAGCAGGAGGAAGGTGAGCACCTGGTaGGCTCTCATCTTTCTCTCTGATGCCACGAACATTCGACCCCCG +
Preference number: 5 (lower is better)
Translates to: ATEVITKSRRKVSTW*ALIFLSDATNIRPP
Trigger: CGGGGGTCGAATGTTCGTGGCATCAGAGAGAAAGATGAGAGCTCACCAGGTGCTCACCTTCCTCCTGCTCTTCGTGATCACCTCGGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CAA 90 bp GGTGTCACTGCTTGTGAGGCAGCGAGAGGTCATCTCTGCATCCTAGTGGGAACCTCCCCCTGCTGCAGCTaGACATTGCCGAAGAGGTAC +
Preference number: 5 (lower is better)
Translates to: GVTACEAARGHLCILVGTSPCCS*TLPKRY
Trigger: GTACCTCTTCGGCAATGTCAAGCTGCAGCAGGGGGA...GGTTCCCACTAGGATGCAGAGATGACCTCTCGCTGCCTCACAAGCAGTGACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CAA 90 bp TGGCTCTACAAGGGAAGGGGCGGGGCCTGTGTTCTCACCATAGACACTAGAGCACAGTTGGGCCTCACCTaGGAATCCCACCCACAACCT +
Preference number: 5 (lower is better)
Translates to: WLYKGRGGACVLTIDTRAQLGLT*ESHPQP
Trigger: AGGTTGTGGGTGGGATTCCAAGGTGAGGCCCAACTG...TGCTCTAGTGTCTATGGTGAGAACACAGGCCCCGCCCCTTCCCTTGTAGAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS TCA 90 bp GTTGGGATGGTCCCACCGTTGAGCACGACGGCCATCTCAGTTGGCTaGTACACGTTGCTTCTAAACGGAGCGCTGGGTCTTTTCCCCAAG +
Preference number: 5 (lower is better)
Translates to: VGMVPPLSTTAISVG*YTLLLNGALGLFPK
Trigger: CTTGGGGAAAAGACCCAGCGCTCCGTTTAGAAGCAACGTGTATCAGCCAACTGAGATGGCCGTCGTGCTCAACGGTGGGACCATCCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300571.7
ENST00000562348.1
ENST00000569479.5
ENST00000569847.1
CDS TCA 90 bp GCCACCGAGGTGATCACGAAGAGCAGGAGGAAGGTGAGCACCTGGTaGGCTCTCATCTTTCTCTCTGATGCCACGAACATTCGAGGGAGG +
Preference number: 5 (lower is better)
Translates to: ATEVITKSRRKVSTW*ALIFLSDATNIRGR
Trigger: CCTCCCTCGAATGTTCGTGGCATCAGAGAGAAAGATGAGAGCTCACCAGGTGCTCACCTTCCTCCTGCTCTTCGTGATCACCTCGGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569847.1
CDS GCA 90 bp CAAGCTGCCACTGGGTCTTTTTCCCAAGCTGCCGTTGGGAAATCCTaGTGTTCGGAGAGCTGGGGGAGGGAGGGATTGGCAAGACAACAT +
Preference number: 5 (lower is better)
Translates to: QAATGSFSQAAVGKS*CSESWGREGLARQH
Trigger: ATGTTGTCTTGCCAATCCCTCCCTCCCCCAGCTCTCCGAACAGCAGGATTTCCCAACGGCAGCTTGGGAAAAAGACCCAGTGGCAGCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000562348.1
CDS CCA 90 bp AGCAGTTGGGATGGTCCCACCGTTGAGCACGACGGCCATCTCAGTTaGCTGATACACGTTGCTTCTAAACGGAGCGCTGGGTCTTTTCCC +
Preference number: 5 (lower is better)
Translates to: SSWDGPTVEHDGHLS*LIHVASKRSAGSFP
Trigger: GGGAAAAGACCCAGCGCTCCGTTTAGAAGCAACGTGTATCAGCCAACTGAGATGGCCGTCGTGCTCAACGGTGGGACCATCCCAACTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300571.7
ENST00000562348.1
ENST00000569479.5
ENST00000569847.1
CDS-3UTR CAA 90 bp GCCTTCCAACCTGCCTCCCGGAGGGGCTTTCAGCTGGAGACCCCATTGGAGCTCTTCCCCAAACGAGTCTaGTTTACACACGCAGATCTT +
Preference number: 5 (lower is better)
Translates to: AFQPASRRGFQLETPLELFPKRV*FTHADL
Trigger: AAGATCTGCGTGTGTAAACAAGACTCGTTTGGGGAA...GAGCTCCAATGGGGTCTCCAGCTGAAAGCCCCTCCGGGAGGCAGGTTGGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS TCA 90 bp ACCATTTCGGTCCCACCGTTGAGCACGACGGCCATCTCAGTTGGCTaGTACACGTTGCTTCTAAACGGAGCGCTGGGTCTTTTCCCCAAG +
Preference number: 5 (lower is better)
Translates to: TISVPPLSTTAISVG*YTLLLNGALGLFPK
Trigger: CTTGGGGAAAAGACCCAGCGCTCCGTTTAGAAGCAACGTGTATCAGCCAACTGAGATGGCCGTCGTGCTCAACGGTGGGACCGAAATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535671.5
CDS-3UTR CAA 90 bp GGACTGCTGCCCCAAGCCAGAATATTTCTATGGCTCTACAAGGGAAGGGGCGGGTTCAGCTTCCACCTCTaGAACTTGCCGCACAGAGTG +
Preference number: 5 (lower is better)
Translates to: GLLPQARIFLWLYKGRGGFSFHL*NLPHRV
Trigger: CACTCTGTGCGGCAAGTTCAAGAGGTGGAAGCTGAA...CCCGCCCCTTCCCTTGTAGAGCCATAGAAATATTCTGGCTTGGGGCAGCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CAA 90 bp TCTTATGCTGGGGAAGCACGACTTTCCATGGCAGCCATTTGTGCTGTGCTCACCTCCCCCTGCTGCAGCTaGACATTGCCGAAGAGGTAC +
Preference number: 5 (lower is better)
Translates to: SYAGEARLSMAAICAVLTSPCCS*TLPKRY
Trigger: GTACCTCTTCGGCAATGTCAAGCTGCAGCAGGGGGA...GGTGAGCACAGCACAAATGGCTGCCATGGAAAGTCGTGCTTCCCCAGCATAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CAA 90 bp GAAACATACTCAGCTCAGACGTACTGGCTTATGAAGCGGTCAGTCCTCCCCCGGTTTCCCAAGCTGCCGTaGGGAAATCCTGCTGTTCGG +
Preference number: 5 (lower is better)
Translates to: ETYSAQTYWLMKRSVLPRFPKLP*GNPAVR
Trigger: CCGAACAGCAGGATTTCCCAACGGCAGCTTGGGAAA...CCGGGGGAGGACTGACCGCTTCATAAGCCAGTACGTCTGAGCTGAGTATGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CAA 90 bp GGTGTCACTGCTTGTGAGGCAGCGAGAGGTCATCTCTGCATCCTAGTGGGAACCTGGCAAAGTCCCCATTaGTCCTCAACGCAACGGTCA +
Preference number: 5 (lower is better)
Translates to: GVTACEAARGHLCILVGTWQSPH*SSTQRS
Trigger: TGACCGTTGCGTTGAGGACAAATGGGGACTTTGCCA...GGTTCCCACTAGGATGCAGAGATGACCTCTCGCTGCCTCACAAGCAGTGACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CAA 90 bp CTGGGGAAGCACGACTTTCCATGGCAGCCATTTGTGCTGTGCTCACCTTATATGGCGTTCAACTCAGCCTaGGCCAACCGAGACCACCAC +
Preference number: 5 (lower is better)
Translates to: LGKHDFPWQPFVLCSPYMAFNSA*ANRDHH
Trigger: GTGGTGGTCTCGGTTGGCCAAGGCTGAGTTGAACGC...CATATAAGGTGAGCACAGCACAAATGGCTGCCATGGAAAGTCGTGCTTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS TCA 90 bp GCCACCGAGGTGATCACGAAGAGCAGGAGGAAGGTGAGCACCTGGTaGGCTCTCATCTTTCTCTCTGATGCCACGAACATTCTGGATGAG +
Preference number: 5 (lower is better)
Translates to: ATEVITKSRRKVSTW*ALIFLSDATNILDE
Trigger: CTCATCCAGAATGTTCGTGGCATCAGAGAGAAAGATGAGAGCTCACCAGGTGCTCACCTTCCTCCTGCTCTTCGTGATCACCTCGGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568214.1
CDS CCA 90 bp AGTAACCATTTCGGTCCCACCGTTGAGCACGACGGCCATCTCAGTTaGCTGATACACGTTGCTTCTAAACGGAGCGCTGGGTCTTTTCCC +
Preference number: 5 (lower is better)
Translates to: SNHFGPTVEHDGHLS*LIHVASKRSAGSFP
Trigger: GGGAAAAGACCCAGCGCTCCGTTTAGAAGCAACGTGTATCAGCCAACTGAGATGGCCGTCGTGCTCAACGGTGGGACCGAAATGGTTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535671.5
CDS-3UTR CAA 90 bp CTGGGGAAGCACGACTTTCCATGGCAGCCATTTGTGCTGTGCTCACCTTATATGCACCCCACGATTCAGTaGGGCCTCACCTTGGAATCC +
Preference number: 5 (lower is better)
Translates to: LGKHDFPWQPFVLCSPYMHPTIQ*GLTLES
Trigger: GGATTCCAAGGTGAGGCCCAACTGAATCGTGGGGTG...CATATAAGGTGAGCACAGCACAAATGGCTGCCATGGAAAGTCGTGCTTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CAA 90 bp TGCCTCCCGGAGGGGCTTTCAGCTGGAGACCCCATTGGAGCTCTTGAAATGAATTGCCACGAACATTCTTaGAGCAGCATCCCTTCCCTG +
Preference number: 5 (lower is better)
Translates to: CLPEGLSAGDPIGALEMNCHEHS*SSIPSL
Trigger: CAGGGAAGGGATGCTGCTCAAAGAATGTTCGTGGCA...ATTCATTTCAAGAGCTCCAATGGGGTCTCCAGCTGAAAGCCCCTCCGGGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569479.5
CDS TCA 90 bp GCCACCGAGGTGATCACGAAGAGCAGGAGGAAGGTGAGCACCTGGTaGGCTCTCATCTTTCTCTCTGATGCCACGAACATTCCTCTGATA +
Preference number: 5 (lower is better)
Translates to: ATEVITKSRRKVSTW*ALIFLSDATNIPLI
Trigger: TATCAGAGGAATGTTCGTGGCATCAGAGAGAAAGATGAGAGCTCACCAGGTGCTCACCTTCCTCCTGCTCTTCGTGATCACCTCGGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566822.1
ENST00000570142.5
CDS-3UTR CAA 90 bp CAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGGGGATGGTCCCACCGTaGAGCACGACGGCCATCTCA +
Preference number: 5 (lower is better)
Translates to: QERHSQGGKSVREILILWGMVPP*STTAIS
Trigger: TGAGATGGCCGTCGTGCTCAACGGTGGGACCATCCC...CCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR CAA 90 bp TTTGATCACAGATGCTCTCCTCCCGGGTCGTTTTCCCCAAACGAGTCTTGTTTACAGAGGGCCTCTTCTTaGGCACATGCCAGGGTCCCT +
Preference number: 5 (lower is better)
Translates to: FDHRCSPPGSFSPNESCLQRASS*AHARVP
Trigger: AGGGACCCTGGCATGTGCCAAAGAAGAGGCCCTCTG...TAAACAAGACTCGTTTGGGGAAAACGACCCGGGAGGAGAGCATCTGTGATCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CAA 90 bp TGGCTCTACAAGGGAAGGGGCGGGGCCTGTGTTCTCACCATAGACACTAGAGCATTGCACTGGGTTGTTTaGACAAGCTACCACACGTCT +
Preference number: 5 (lower is better)
Translates to: WLYKGRGGACVLTIDTRALHWVV*TSYHTS
Trigger: AGACGTGTGGTAGCTTGTCAAAACAACCCAGTGCAA...TGCTCTAGTGTCTATGGTGAGAACACAGGCCCCGCCCCTTCCCTTGTAGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS TCA 90 bp GATTCTCTGGAACTTAAAGTCTTTCACCAAAGGTGTCTTCCTGTGTaGCTTGGCGGAGCAGTTGGGATGGTCCCACCGTTGAGCACGACG +
Preference number: 5 (lower is better)
Translates to: DSLELKVFHQRCLPV*LGGAVGMVPPLSTT
Trigger: CGTCGTGCTCAACGGTGGGACCATCCCAACTGCTCCGCCAAGTCACACAGGAAGACACCTTTGGTGAAAGACTTTAAGTTCCAGAGAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300571.7
ENST00000562348.1
ENST00000569479.5
ENST00000569847.1
CDS CCA 90 bp GCACCTGGTGAGCTCTCATCTTTCTCTCTGATGCCACGAACATTCTaGATGAGAACCATGGCTGTAGACTCAAGCTCGACACACAGCACC +
Preference number: 5 (lower is better)
Translates to: APGELSSFSLMPRTF*MRTMAVDSSSTHST
Trigger: GGTGCTGTGTGTCGAGCTTGAGTCTACAGCCATGGTTCTCATCCAGAATGTTCGTGGCATCAGAGAGAAAGATGAGAGCTCACCAGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568214.1
CDS-3UTR CAA 90 bp GAAATGTGCAAACCACCAGGCAAGCCGGTGGCAAAGTCCCCATTTGTCCTCAACTTGCGGGGATTGAGGTaGGTCTGGTATTACGTGTCT +
Preference number: 5 (lower is better)
Translates to: EMCKPPGKPVAKSPFVLNLRGLR*VWYYVS
Trigger: AGACACGTAATACCAGACCAACCTCAATCCCCGCAA...GTTGAGGACAAATGGGGACTTTGCCACCGGCTTGCCTGGTGGTTTGCACATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CAA 90 bp CCCACCTCCAACCAACACCAGTCTGGCCCACCAGCTGTGAATTTGGTTCTGTTCTTTAGTTTGCGGGGATaGAGGTTGGTCTGGTATTAC +
Preference number: 5 (lower is better)
Translates to: PTSNQHQSGPPAVNLVLFFSLRG*RLVWYY
Trigger: GTAATACCAGACCAACCTCAATCCCCGCAAACTAAA...GAACAGAACCAAATTCACAGCTGGTGGGCCAGACTGGTGTTGGTTGGAGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CAA 90 bp AAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTCAGAGGGCCTCTTCTTaGGCACATGCCAGGGTCCCT +
Preference number: 5 (lower is better)
Translates to: KTQPGRQIGKRNSDSLELQRASS*AHARVP
Trigger: AGGGACCCTGGCATGTGCCAAAGAAGAGGCCCTCTG...AAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CAA 90 bp TCCATTCCATCCAGGAATTTTCACCATAGCAACGGAAAGGACCCGAGGTGTCACGAGAACATGGGGGCTTaGAATGGCCGAGATGTTCGA +
Preference number: 5 (lower is better)
Translates to: SIPSRNFHHSNGKDPRCHENMGA*NGRDVR
Trigger: TCGAACATCTCGGCCATTCAAAGCCCCCATGTTCTC...GTGACACCTCGGGTCCTTTCCGTTGCTATGGTGAAAATTCCTGGATGGAATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CAA 90 bp ACATGCCAGGGTCCCTCCACCTCTACTGGCTATAAAGCTCACCCCACGATTCAGAAACGAACGTGTGAATaGCTCCATCGTGTGAATGGT +
Preference number: 5 (lower is better)
Translates to: TCQGPSTSTGYKAHPTIQKRTCE*LHRVNG
Trigger: ACCATTCACACGATGGAGCAATTCACACGTTCGTTT...CTGAATCGTGGGGTGAGCTTTATAGCCAGTAGAGGTGGAGGGACCCTGGCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CAA 90 bp AGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTACCAACACCCGCTTCCTaGGCCCCTCGAAACACACAC +
Preference number: 5 (lower is better)
Translates to: RHSQGGKSVREILILWNLPTPAS*APRNTH
Trigger: GTGTGTGTTTCGAGGGGCCAAGGAAGCGGGTGTTGG...TAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569847.1
CDS-3UTR CAA 90 bp CCTCAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTTCTTCTCCTTCTCCTaGATGAAGGGCAGCCGCACC +
Preference number: 5 (lower is better)
Translates to: PQERHSQGGKSVREILILFFSFS*MKGSRT
Trigger: GGTGCGGCTGCCCTTCATCAAGGAGAAGGAGAAGAA...GAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR CAA 90 bp CAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGTTCTTCTCCTTCTCCTaGATGAAGGGCAGCCGCACC +
Preference number: 5 (lower is better)
Translates to: QERHSQGGKSVREILILWFFSFS*MKGSRT
Trigger: GGTGCGGCTGCCCTTCATCAAGGAGAAGGAGAAGAA...CCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR CAA 90 bp TGTGAATTTGGTTCTGTTCTACCCCCAGAGGATGAAACAGTCTTCCCAGCCACATGCTGCAGCTTGACATaGCCGAAGAGGTACATGGTC +
Preference number: 5 (lower is better)
Translates to: CEFGSVLPPEDETVFPATCCSLT*PKRYMV
Trigger: GACCATGTACCTCTTCGGCAATGTCAAGCTGCAGCA...TGTGGCTGGGAAGACTGTTTCATCCTCTGGGGGTAGAACAGAACCAAATTCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CAA 90 bp AGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAATCCCCCTGCTGCAGCTaGACATTGCCGAAGAGGTAC +
Preference number: 5 (lower is better)
Translates to: RKTQPGRQIGKRNSDSLESPCCS*TLPKRY
Trigger: GTACCTCTTCGGCAATGTCAAGCTGCAGCAGGGGGA...TTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR CAA 90 bp TCCATTCCATCCAGGAATTTTCACCATAGCAACGGAAAGGACCCGAGGTGTCACGTTCGGAGAGCTGCATaGTGTTCATCCATGGAGAAG +
Preference number: 5 (lower is better)
Translates to: SIPSRNFHHSNGKDPRCHVRRAA*CSSMEK
Trigger: CTTCTCCATGGATGAACACAATGCAGCTCTCCGAAC...GTGACACCTCGGGTCCTTTCCGTTGCTATGGTGAAAATTCCTGGATGGAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CAA 90 bp CAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAAGTCGTCTTCCTGTGTGACTaGGCGGAGCAGTTGGGATGG +
Preference number: 5 (lower is better)
Translates to: QPGRQIGKRNSDSLELKVVFLCD*AEQLGW
Trigger: CCATCCCAACTGCTCCGCCAAGTCACACAGGAAGAC...GACTTTAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR CAA 90 bp CCCACCCTCATTTATACATTCCATGCCGTCAGGTTAAAACTCTGCTTTGAATCGGTCTTCCTGTGTGACTaGGCGGAGCAGTTGGGATGG +
Preference number: 5 (lower is better)
Translates to: PTLIYTFHAVRLKLCFESVFLCD*AEQLGW
Trigger: CCATCCCAACTGCTCCGCCAAGTCACACAGGAAGAC...CGATTCAAAGCAGAGTTTTAACCTGACGGCATGGAATGTATAAATGAGGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CAA 90 bp AGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAGTCTTCCTGTGTGACTaGGCGGAGCAGTTGGGATGG +
Preference number: 5 (lower is better)
Translates to: RHSQGGKSVREILILWNLVFLCD*AEQLGW
Trigger: CCATCCCAACTGCTCCGCCAAGTCACACAGGAAGAC...TAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR CAA 90 bp CCCACCCTCATTTATACATTCCATGCCGTCAGGTTAAAACTCTGCTTTGAATCGCACCCCACGATTCAGTaGGGCCTCACCTTGGAATCC +
Preference number: 5 (lower is better)
Translates to: PTLIYTFHAVRLKLCFESHPTIQ*GLTLES
Trigger: GGATTCCAAGGTGAGGCCCAACTGAATCGTGGGGTG...CGATTCAAAGCAGAGTTTTAACCTGACGGCATGGAATGTATAAATGAGGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CAA 90 bp CAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAAGTCTTCTTCTCCTTCTCCTaGATGAAGGGCAGCCGCACC +
Preference number: 5 (lower is better)
Translates to: QPGRQIGKRNSDSLELKVFFSFS*MKGSRT
Trigger: GGTGCGGCTGCCCTTCATCAAGGAGAAGGAGAAGAA...GACTTTAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR CAA 90 bp CAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGTGCTGCAGCTTGACATaGCCGAAGAGGTACATGGTC +
Preference number: 5 (lower is better)
Translates to: QERHSQGGKSVREILILWCCSLT*PKRYMV
Trigger: GACCATGTACCTCTTCGGCAATGTCAAGCTGCAGCA...CCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR CAA 90 bp TCAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGTTTCCCAAGCTGCCGTaGGGAAATCCTGCTGTTCGG +
Preference number: 5 (lower is better)
Translates to: SRKTQPGRQIGKRNSDSLFPKLP*GNPAVR
Trigger: CCGAACAGCAGGATTTCCCAACGGCAGCTTGGGAAA...CAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR CAA 90 bp AAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTCGACGGCCATCTCAGTaGGCTGATACACGTTGCTTC +
Preference number: 5 (lower is better)
Translates to: KTQPGRQIGKRNSDSLELRRPSQ*ADTRCF
Trigger: GAAGCAACGTGTATCAGCCAACTGAGATGGCCGTCG...AAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR CAA 90 bp CCCACCCTCATTTATACATTCCATGCCGTCAGGTTAAAACTCTGCTTTGAATCGCGACGGCCATCTCAGTaGGCTGATACACGTTGCTTC +
Preference number: 5 (lower is better)
Translates to: PTLIYTFHAVRLKLCFESRRPSQ*ADTRCF
Trigger: GAAGCAACGTGTATCAGCCAACTGAGATGGCCGTCG...CGATTCAAAGCAGAGTTTTAACCTGACGGCATGGAATGTATAAATGAGGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CAA 90 bp AGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAATTCAGCTTCCACCTCTaGAACTTGCCGCACAGAGTG +
Preference number: 5 (lower is better)
Translates to: RKTQPGRQIGKRNSDSLEFSFHL*NLPHRV
Trigger: CACTCTGTGCGGCAAGTTCAAGAGGTGGAAGCTGAA...TTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR CAA 90 bp CAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAAGTCTGCTGCAGCTTGACATaGCCGAAGAGGTACATGGTC +
Preference number: 5 (lower is better)
Translates to: QPGRQIGKRNSDSLELKVCCSLT*PKRYMV
Trigger: GACCATGTACCTCTTCGGCAATGTCAAGCTGCAGCA...GACTTTAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR CAA 90 bp ACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAACGACGGCCATCTCAGTaGGCTGATACACGTTGCTTC +
Preference number: 5 (lower is better)
Translates to: TQPGRQIGKRNSDSLELKRRPSQ*ADTRCF
Trigger: GAAGCAACGTGTATCAGCCAACTGAGATGGCCGTCG...TTTAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR CAA 90 bp CAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGTTGCGGGGATTGAGGTaGGTCTGGTATTACGTGTCT +
Preference number: 5 (lower is better)
Translates to: QERHSQGGKSVREILILWLRGLR*VWYYVS
Trigger: AGACACGTAATACCAGACCAACCTCAATCCCCGCAA...CCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CAA 90 bp AGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAGAGAACATGGGGGCTTaGAATGGCCGAGATGTTCGA +
Preference number: 5 (lower is better)
Translates to: RHSQGGKSVREILILWNLENMGA*NGRDVR
Trigger: TCGAACATCTCGGCCATTCAAAGCCCCCATGTTCTC...TAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CAA 90 bp CCCACCTCCAACCAACACCAGTCTGGCCCACCAGCTGTGAATTTGGTTCTGTTCAATATGTTCTGTGGTTaGCTGTTAACCAAGATTCTC +
Preference number: 5 (lower is better)
Translates to: PTSNQHQSGPPAVNLVLFNMFCG*LLTKIL
Trigger: GAGAATCTTGGTTAACAGCAAACCACAGAACATATT...GAACAGAACCAAATTCACAGCTGGTGGGCCAGACTGGTGTTGGTTGGAGGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CAA 90 bp TCTTATGCTGGGGAAGCACGACTTTCCATGGCAGCCATTTGTGCTGTGCTCACCCCCCAACCTCTGAATTaGGTTTTAAGTTTACCTAGT +
Preference number: 5 (lower is better)
Translates to: SYAGEARLSMAAICAVLTPQPLN*VLSLPS
Trigger: ACTAGGTAAACTTAAAACCAAATTCAGAGGTTGGGG...GGTGAGCACAGCACAAATGGCTGCCATGGAAAGTCGTGCTTCCCCAGCATAAGA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CAA 90 bp GAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTACCAGTTTTCCCACTaGTGGCCGCCTTTGCAAAGA +
Preference number: 5 (lower is better)
Translates to: ERHSQGGKSVREILILWNYQFSH*WPPLQR
Trigger: TCTTTGCAAAGGCGGCCACAAGTGGGAAAACTGGTA...GTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CAA 90 bp CACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAAGAACTCCCAGATGTCGTaGTCCGTTTACGCACACTGG +
Preference number: 5 (lower is better)
Translates to: HSQGGKSVREILILWNLKNSQMS*SVYAHW
Trigger: CCAGTGTGCGTAAACGGACAACGACATCTGGGAGTT...CTTTAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569847.1
CDS-3UTR CAA 90 bp TCAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGTTCGGAGAGCTGCATaGTGTTCATCCATGGAGAAG +
Preference number: 5 (lower is better)
Translates to: SRKTQPGRQIGKRNSDSLVRRAA*CSSMEK
Trigger: CTTCTCCATGGATGAACACAATGCAGCTCTCCGAAC...CAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300571.7
ENST00000569479.5
ENST00000569847.1
CDS-3UTR CAA 90 bp CTGGGGAAGCACGACTTTCCATGGCAGCCATTTGTGCTGTGCTCACCTTATATGTTACACGAAATCCCCTaGGCTAGGATTTCCAAATTT +
Preference number: 5 (lower is better)
Translates to: LGKHDFPWQPFVLCSPYMLHEIP*ARISKF
Trigger: AAATTTGGAAATCCTAGCCAAGGGGATTTCGTGTAA...CATATAAGGTGAGCACAGCACAAATGGCTGCCATGGAAAGTCGTGCTTCCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CAA 90 bp ACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTAAACCACCAGCTGTGAATTaGGTTCTGTTCTACCCCCAG +
Preference number: 5 (lower is better)
Translates to: TQPGRQIGKRNSDSLELKPPAVN*VLFYPQ
Trigger: CTGGGGGTAGAACAGAACCAAATTCACAGCTGGTGG...TTTAAGTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CAA 90 bp AGCAACAAGAAACCCTCATGTGATCCATTCCATCCAGGAATTTTCACCATAGCACCACCAGCTGTGAATTaGGTTCTGTTCTACCCCCAG +
Preference number: 5 (lower is better)
Translates to: SNKKPSCDPFHPGIFTIAPPAVN*VLFYPQ
Trigger: CTGGGGGTAGAACAGAACCAAATTCACAGCTGGTGG...TGCTATGGTGAAAATTCCTGGATGGAATGGATCACATGAGGGTTTCTTGTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CAA 90 bp TTTTCAGTTCGTCAGTGTTCACATTTACACGAAATCCCCTTGGCTAGGATTTCCTGGCAAAGTCCCCATTaGTCCTCAACGCAACGGTCA +
Preference number: 5 (lower is better)
Translates to: FSVRQCSHLHEIPLARISWQSPH*SSTQRS
Trigger: TGACCGTTGCGTTGAGGACAAATGGGGACTTTGCCA...GGAAATCCTAGCCAAGGGGATTTCGTGTAAATGTGAACACTGACGAACTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CAA 90 bp CTGGGGAAGCACGACTTTCCATGGCAGCCATTTGTGCTGTGCTCACCTTATATGTGGCAAAGATGTCTCTaGATACTTTTCAGGTGTAGT +
Preference number: 5 (lower is better)
Translates to: LGKHDFPWQPFVLCSPYMWQRCL*ILFRCS
Trigger: ACTACACCTGAAAAGTATCAAGAGACATCTTTGCCA...CATATAAGGTGAGCACAGCACAAATGGCTGCCATGGAAAGTCGTGCTTCCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CAA 90 bp GAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACTTTAGTTTGCGGGGATaGAGGTTGGTCTGGTATTAC +
Preference number: 5 (lower is better)
Translates to: ERHSQGGKSVREILILWNFSLRG*RLVWYY
Trigger: GTAATACCAGACCAACCTCAATCCCCGCAAACTAAA...GTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CAA 90 bp TCCATTCCATCCAGGAATTTTCACCATAGCAACGGAAAGGACCCGAGGTGTCACACAGGACCGAGGTGTTaGAAGATTTCTTTCTTTTCA +
Preference number: 5 (lower is better)
Translates to: SIPSRNFHHSNGKDPRCHTGPRC*KISFFS
Trigger: TGAAAAGAAAGAAATCTTCAAACACCTCGGTCCTGT...GTGACACCTCGGGTCCTTTCCGTTGCTATGGTGAAAATTCCTGGATGGAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CAA 90 bp AGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAAGGCTGCTACAGTCTCTaGGCAAAGATGTCTCTTGAT +
Preference number: 5 (lower is better)
Translates to: RKTQPGRQIGKRNSDSLEGCYSL*AKMSLD
Trigger: ATCAAGAGACATCTTTGCCAAGAGACTGTAGCAGCC...TTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CAA 90 bp AGACACTTAAACCCAGACAGATGTAACAAAGGATTTTTGTTGTCTAAGTCCCAATTTCCCAAGCTGCCGTaGGGAAATCCTGCTGTTCGG +
Preference number: 5 (lower is better)
Translates to: RHLNPDRCNKGFLLSKSQFPKLP*GNPAVR
Trigger: CCGAACAGCAGGATTTCCCAACGGCAGCTTGGGAAA...TTGGGACTTAGACAACAAAAATCCTTTGTTACATCTGTCTGGGTTTAAGTGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CAA 90 bp TGCTTTAGTTTGCGGGGATTGAGGTTGGTCTGGTATTACGTGTCTGTGTGTGTGTTACACGAAATCCCCTaGGCTAGGATTTCCAAATTT +
Preference number: 5 (lower is better)
Translates to: CFSLRGLRLVWYYVSVCVLHEIP*ARISKF
Trigger: AAATTTGGAAATCCTAGCCAAGGGGATTTCGTGTAA...CACACACACAGACACGTAATACCAGACCAACCTCAATCCCCGCAAACTAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CAA 90 bp CAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGACAGAAACAATGGGCTaGGAAAAGGGCTGTTTTCAT +
Preference number: 5 (lower is better)
Translates to: QERHSQGGKSVREILILWTETMG*EKGCFH
Trigger: ATGAAAACAGCCCTTTTCCAAGCCCATTGTTTCTGT...CCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300571.7
ENST00000569479.5
CDS-3UTR CAA 90 bp GAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGAACGCAGAGACTAGGGCCTaGAGAAATATCAAAAGGTTT +
Preference number: 5 (lower is better)
Translates to: ERHSQGGKSVREILILWNAETRA*RNIKRF
Trigger: AAACCTTTTGATATTTCTCAAGGCCCTAGTCTCTGC...GTTCCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CAA 90 bp TATAAAAGCCACAATGCTCCCTTTCAACTTGGGGTTTGGCCTGAGGCGTTCAACAGGTGCCATTTAATTTaGTCTTTAAACCTTGCTCCA +
Preference number: 5 (lower is better)
Translates to: YKSHNAPFQLGVWPEAFNRCHLI*SLNLAP
Trigger: TGGAGCAAGGTTTAAAGACAAAATTAAATGGCACCT...GTTGAACGCCTCAGGCCAAACCCCAAGTTGAAAGGGAGCATTGTGGCTTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS-3UTR CAA 90 bp CAAGAAAGACACAGCCAGGGAGGCAAATCGGTAAGAGAAATTCTGATTCTCTGGGCTCACCTTATATGCTaGGACAATAAAGAACTTAGA +
Preference number: 5 (lower is better)
Translates to: QERHSQGGKSVREILILWAHLIC*DNKELR
Trigger: TCTAAGTTCTTTATTGTCCAAGCATATAAGGTGAGC...CCAGAGAATCAGAATTTCTCTTACCGATTTGCCTCCCTGGCTGTGTCTTTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300571.7
CDS GCA 72 bp CACGCCCGCCTGCGGGTCCAGCTTCACTGCAGCGCCTaGCAGAGTCGCTGCCGCGCGAGGCGCCCCCTGGCC +
Preference number: 6 (lower is better)
Translates to: HARLRVQLHCSA*QSRCRARRPLA
Trigger: GGCCAGGGGGCGCCTCGCGCGGCAGCGACTCTGGCAGGCGCTGCAGTGAAGCTGGACCCGCAGGCGGGCGTG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562469.5
CDS GCA 72 bp CGCTCCACGCACGCCCGCCTGCGGGTCCAGCTTCACTaGAGCGCCTGCCAGAGTCGCTGCCGCGCGAGGCGC +
Preference number: 6 (lower is better)
Translates to: RSTHARLRVQLH*SACQSRCRARR
Trigger: GCGCCTCGCGCGGCAGCGACTCTGGCAGGCGCTGCAGTGAAGCTGGACCCGCAGGCGGGCGTGCGTGGAGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562469.5
CDS GCA 72 bp AGGGCTCACACACTCAGCGGCCCGGGCCACTGGCCGTaGGCTCCGCAGACGGTCAGGGCACAGCCCGGACGC +
Preference number: 6 (lower is better)
Translates to: RAHTLSGPGHWP*APQTVRAQPGR
Trigger: GCGTCCGGGCTGTGCCCTGACCGTCTGCGGAGCGCACGGCCAGTGGCCCGGGCCGCTGAGTGTGTGAGCCCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569847.1
CDS CCA 72 bp CCCTTCAGGGCTCACACACTCAGCGGCCCGGGCCACTaGCCGTGCGCTCCGCAGACGGTCAGGGCACAGCCC +
Preference number: 6 (lower is better)
Translates to: PFRAHTLSGPGH*PCAPQTVRAQP
Trigger: GGGCTGTGCCCTGACCGTCTGCGGAGCGCACGGCCAGTGGCCCGGGCCGCTGAGTGTGTGAGCCCTGAAGGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569847.1
CDS GCA 72 bp GCCCGTGCCATGCCGCACCAGCCTCCGCACGCGCCATaGCTGGCTCAGCAGGCAGGAGAAGCAGAGCGCAAA +
Preference number: 6 (lower is better)
Translates to: ARAMPHQPPHAP*LAQQAGEAERK
Trigger: TTTGCGCTCTGCTTCTCCTGCCTGCTGAGCCAGGCATGGCGCGTGCGGAGGCTGGTGCGGCATGGCACGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300571.7
ENST00000535671.5
ENST00000566822.1
ENST00000569479.5
ENST00000569847.1
CDS TCA 72 bp CCCCAGATGGCGTCCAGGTCGCACAGGGACACGTACTaGGGGAGGAGGTCCAGCCCACAGCCTCGGGATGTG +
Preference number: 6 (lower is better)
Translates to: PQMASRSHRDTY*GRRSSPQPRDV
Trigger: CACATCCCGAGGCTGTGGGCTGGACCTCCTCCCTCAGTACGTGTCCCTGTGCGACCTGGACGCCATCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300571.7
ENST00000535671.5
ENST00000562469.5
ENST00000566822.1
ENST00000568214.1
ENST00000569479.5
ENST00000569847.1
ENST00000570142.5
CDS CAA 90 bp GTCACGCAGCACGGTGAGCACCAGCCACTCCACAGCGATGATGACTaGCACCAGCATCAGGCACAGCGCCAGGCCCACCAGCTGCCAGCC +
Preference number: 6 (lower is better)
Translates to: VTQHGEHQPLHSDDD*HQHQAQRQAHQLPA
Trigger: GGCTGGCAGCTGGTGGGCCTGGCGCTGTGCCTGATGCTGGTGCAAGTCATCATCGCTGTGGAGTGGCTGGTGCTCACCGTGCTGCGTGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300571.7
ENST00000535671.5
ENST00000569479.5
ENST00000569847.1
CDS CCA 72 bp AGCTGCTGTAGAGACCAGGGGAAGGAGGCCCATGGTTaGGCCTCTGGTTCCCCCTCCAAGCCACGCAGCCTC +
Preference number: 6 (lower is better)
Translates to: SCCRDQGKEAHG*ASGSPSKPRSL
Trigger: GAGGCTGCGTGGCTTGGAGGGGGAACCAGAGGCCCAACCATGGGCCTCCTTCCCCTGGTCTCTACAGCAGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562348.1
CDS CCA 72 bp TCGAAACACACACGTCCAGTCGGTGCACCCCTCACGTaGGTCCCTACGCAGGATCGCCACCACCCCTACCGC +
Preference number: 6 (lower is better)
Translates to: SKHTRPVGAPLT*VPTQDRHHPYR
Trigger: GCGGTAGGGGTGGTGGCGATCCTGCGTAGGGACCCACGTGAGGGGTGCACCGACTGGACGTGTGTGTTTCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569847.1
CDS GCA 72 bp CTTCCTTGGCCCCTCGAAACACACACGTCCAGTCGGTaGACCCCTCACGTGGGTCCCTACGCAGGATCGCCA +
Preference number: 6 (lower is better)
Translates to: LPWPLETHTSSR*TPHVGPYAGSP
Trigger: TGGCGATCCTGCGTAGGGACCCACGTGAGGGGTGCACCGACTGGACGTGTGTGTTTCGAGGGGCCAAGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569847.1
CDS GCA 72 bp CAGGTCCAGGACGCAGAGAGGATCGATCCCGCCCGGTaGCTCTCGAAGTCACCAACGCCCCGGTATACACCT +
Preference number: 6 (lower is better)
Translates to: QVQDAERIDPAR*LSKSPTPRYTP
Trigger: AGGTGTATACCGGGGCGTTGGTGACTTCGAGAGGCACCGGGCGGGATCGATCCTCTCTGCGTCCTGGACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564449.1
ENST00000569847.1
CDS CCA 72 bp GGCCATCACAAAGTCCATGGGCTCGTAGGCGCAGGCTaGCCTTGTGTCACGCAGCACGGTGAGCACCAGCCA +
Preference number: 6 (lower is better)
Translates to: GHHKVHGLVGAG*PCVTQHGEHQP
Trigger: TGGCTGGTGCTCACCGTGCTGCGTGACACAAGGCCAGCCTGCGCCTACGAGCCCATGGACTTTGTGATGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300571.7
ENST00000535671.5
ENST00000569479.5
ENST00000569847.1
CDS CCA 72 bp TCTCCCGCATCCTGGGCTGCGACGTGTCGAAGTAGTTaGGCGTGTTCTCCTGCAGGGCTGGCAGAAGGGTGC +
Preference number: 6 (lower is better)
Translates to: SPASWAATCRSS*ACSPAGLAEGC
Trigger: GCACCCTTCTGCCAGCCCTGCAGGAGAACACGCCCAACTACTTCGACACGTCGCAGCCCAGGATGCGGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300571.7
ENST00000535671.5
ENST00000569479.5
ENST00000569847.1
CDS CCA 72 bp GCTGCACGTCCTCCTCGAAGGCCGTCTCCCGCATCCTaGGCTGCGACGTGTCGAAGTAGTTGGGCGTGTTCT +
Preference number: 6 (lower is better)
Translates to: AARPPRRPSPAS*AATCRSSWACS
Trigger: AGAACACGCCCAACTACTTCGACACGTCGCAGCCCAGGATGCGGGAGACGGCCTTCGAGGAGGACGTGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300571.7
ENST00000535671.5
ENST00000569479.5
ENST00000569847.1
CDS CAA 72 bp CACGGTGAGCACCAGCCACTCCACAGCGATGATGACTaGCACCAGCATCAGGCACAGCGCCAGGCCCACCAG +
Preference number: 6 (lower is better)
Translates to: HGEHQPLHSDDD*HQHQAQRQAHQ
Trigger: CTGGTGGGCCTGGCGCTGTGCCTGATGCTGGTGCAAGTCATCATCGCTGTGGAGTGGCTGGTGCTCACCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300571.7
ENST00000535671.5
ENST00000569479.5
ENST00000569847.1
CDS CCA 72 bp CGTGTCGAAGTAGTTGGGCGTGTTCTCCTGCAGGGCTaGCAGAAGGGTGCAGTGGATCTCAGGGATGGCGTG +
Preference number: 6 (lower is better)
Translates to: RVEVVGRVLLQG*QKGAVDLRDGV
Trigger: CACGCCATCCCTGAGATCCACTGCACCCTTCTGCCAGCCCTGCAGGAGAACACGCCCAACTACTTCGACACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300571.7
ENST00000535671.5
ENST00000569479.5
ENST00000569847.1
CDS CCA 72 bp TCCGTTTACGCACACTGGGACCAACACCCGCTTCCTTaGCCCCTCGAAACACACACGTCCAGTCGGTGCACC +
Preference number: 6 (lower is better)
Translates to: SVYAHWDQHPLP*PLETHTSSRCT
Trigger: GGTGCACCGACTGGACGTGTGTGTTTCGAGGGGCCAAGGAAGCGGGTGTTGGTCCCAGTGTGCGTAAACGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569847.1
CDS CAA 72 bp GTGATGAGGAGGAAGGCCCCGTTCAGCTTCCACCTCTaGAACTTGCCGCACAGAGTGAAGAGGGCCAGCCCC +
Preference number: 6 (lower is better)
Translates to: VMRRKAPFSFHL*NLPHRVKRASP
Trigger: GGGGCTGGCCCTCTTCACTCTGTGCGGCAAGTTCAAGAGGTGGAAGCTGAACGGGGCCTTCCTCCTCATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300571.7
ENST00000535671.5
ENST00000569479.5
ENST00000569847.1
CDS CAA 72 bp GGGTCGTTCCAGGCATCCCCCTGCTGCAGCTTGACATaGCCGAAGAGGTACATGGTCATCCAGGCCACCCAG +
Preference number: 6 (lower is better)
Translates to: GSFQASPCCSLT*PKRYMVIQATQ
Trigger: CTGGGTGGCCTGGATGACCATGTACCTCTTCGGCAATGTCAAGCTGCAGCAGGGGGATGCCTGGAACGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300571.7
ENST00000535671.5
ENST00000569479.5
ENST00000569847.1
CDS CAA 72 bp CCCAAGCTGCCACTGGGTCTTTTTCCCAAGCTGCCGTaGGGAAATCCTGCTGTTCGGAGAGCTGGGGGAGGG +
Preference number: 6 (lower is better)
Translates to: PKLPLGLFPKLP*GNPAVRRAGGG
Trigger: CCCTCCCCCAGCTCTCCGAACAGCAGGATTTCCCAACGGCAGCTTGGGAAAAAGACCCAGTGGCAGCTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000562348.1
CDS CAA 72 bp GTCCGTTTACGCACACTGGGACCAACACCCGCTTCCTaGGCCCCTCGAAACACACACGTCCAGTCGGTGCAC +
Preference number: 6 (lower is better)
Translates to: VRLRTLGPTPAS*APRNTHVQSVH
Trigger: GTGCACCGACTGGACGTGTGTGTTTCGAGGGGCCAAGGAAGCGGGTGTTGGTCCCAGTGTGCGTAAACGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569847.1
CDS CAA 90 bp GCCAAGGTGGGGTCGTTCCAGGCATCCCCCTGCTGCAGCTTGACATaGCCGAAGAGGTACATGGTCATCCAGGCCACCCAGATGAGCACA +
Preference number: 6 (lower is better)
Translates to: AKVGSFQASPCCSLT*PKRYMVIQATQMST
Trigger: TGTGCTCATCTGGGTGGCCTGGATGACCATGTACCTCTTCGGCAATGTCAAGCTGCAGCAGGGGGATGCCTGGAACGACCCCACCTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300571.7
ENST00000535671.5
ENST00000569479.5
ENST00000569847.1
CDS CAA 90 bp GTGATGGCCAAGGTGGGGTCGTTCCAGGCATCCCCCTGCTGCAGCTaGACATTGCCGAAGAGGTACATGGTCATCCAGGCCACCCAGATG +
Preference number: 6 (lower is better)
Translates to: VMAKVGSFQASPCCS*TLPKRYMVIQATQM
Trigger: CATCTGGGTGGCCTGGATGACCATGTACCTCTTCGGCAATGTCAAGCTGCAGCAGGGGGATGCCTGGAACGACCCCACCTTGGCCATCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300571.7
ENST00000535671.5
ENST00000569479.5
ENST00000569847.1
CDS CAA 90 bp GATGTCGTTGTCCGTTTACGCACACTGGGACCAACACCCGCTTCCTaGGCCCCTCGAAACACACACGTCCAGTCGGTGCACCCCTCACGT +
Preference number: 6 (lower is better)
Translates to: DVVVRLRTLGPTPAS*APRNTHVQSVHPSR
Trigger: ACGTGAGGGGTGCACCGACTGGACGTGTGTGTTTCGAGGGGCCAAGGAAGCGGGTGTTGGTCCCAGTGTGCGTAAACGGACAACGACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569847.1
CDS GCA 72 bp GTGATGGCCAAGGTGGGGTCGTTCCAGGCATCCCCCTaGTGCAGCTTGACATTGCCGAAGAGGTACATGGTC +
Preference number: 6 (lower is better)
Translates to: VMAKVGSFQASP*CSLTLPKRYMV
Trigger: GACCATGTACCTCTTCGGCAATGTCAAGCTGCAGCAGGGGGATGCCTGGAACGACCCCACCTTGGCCATCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300571.7
ENST00000535671.5
ENST00000569479.5
ENST00000569847.1
CDS CCA 72 bp CCAAGCTGCCACTGGGTCTTTTTCCCAAGCTGCCGTTaGGAAATCCTGCTGTTCGGAGAGCTGGGGGAGGGA +
Preference number: 6 (lower is better)
Translates to: PSCHWVFFPSCR*EILLFGELGEG
Trigger: TCCCTCCCCCAGCTCTCCGAACAGCAGGATTTCCCAACGGCAGCTTGGGAAAAAGACCCAGTGGCAGCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000562348.1
CDS CAA 72 bp AAGGTGGGGTCGTTCCAGGCATCCCCCTGCTGCAGCTaGACATTGCCGAAGAGGTACATGGTCATCCAGGCC +
Preference number: 6 (lower is better)
Translates to: KVGSFQASPCCS*TLPKRYMVIQA
Trigger: GGCCTGGATGACCATGTACCTCTTCGGCAATGTCAAGCTGCAGCAGGGGGATGCCTGGAACGACCCCACCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300571.7
ENST00000535671.5
ENST00000569479.5
ENST00000569847.1
CDS GCA 72 bp AGGAGCCTGACCCATCTCAGTGGGTTTGGGAAAAGCTaGTGTAGAGACCAGGGGAAGGAGGCCCATGGTTGG +
Preference number: 6 (lower is better)
Translates to: RSLTHLSGFGKS*CRDQGKEAHGW
Trigger: CCAACCATGGGCCTCCTTCCCCTGGTCTCTACAGCAGCTTTTCCCAAACCCACTGAGATGGGTCAGGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562348.1
CDS CCA 72 bp CCCAACTCCCAGATGTCGTTGTCCGTTTACGCACACTaGGACCAACACCCGCTTCCTTGGCCCCTCGAAACA +
Preference number: 6 (lower is better)
Translates to: PNSQMSLSVYAH*DQHPLPWPLET
Trigger: TGTTTCGAGGGGCCAAGGAAGCGGGTGTTGGTCCCAGTGTGCGTAAACGGACAACGACATCTGGGAGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564449.1
ENST00000569847.1
CDS CAA 90 bp AGGAACAGAAAGTGGAGGCCCACAGGGCTCTTCTTCTCCTTCTCCTaGATGAAGGGCAGCCGCACCAGGAGGATGAGCATCAGGAGCAGT +
Preference number: 6 (lower is better)
Translates to: RNRKWRPTGLFFSFS*MKGSRTRRMSIRSS
Trigger: ACTGCTCCTGATGCTCATCCTCCTGGTGCGGCTGCCCTTCATCAAGGAGAAGGAGAAGAAGAGCCCTGTGGGCCTCCACTTTCTGTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300571.7
ENST00000535671.5
ENST00000562469.5
ENST00000566822.1
ENST00000569479.5
ENST00000569847.1
CDS CAA 72 bp CCCAAGCTGCCACTGGGTCTTTTTCCCAAGCTGCCGTaGGGAAATCCTGCTGTTCGGAGAGCTGCATTGTGT +
Preference number: 6 (lower is better)
Translates to: PKLPLGLFPKLP*GNPAVRRAALC
Trigger: ACACAATGCAGCTCTCCGAACAGCAGGATTTCCCAACGGCAGCTTGGGAAAAAGACCCAGTGGCAGCTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300571.7
ENST00000535671.5
ENST00000569479.5
ENST00000569847.1
CDS CCA 72 bp CCAAGCTGCCACTGGGTCTTTTTCCCAAGCTGCCGTTaGGAAATCCTGCTGTTCGGAGAGCTGCATTGTGTT +
Preference number: 6 (lower is better)
Translates to: PSCHWVFFPSCR*EILLFGELHCV
Trigger: AACACAATGCAGCTCTCCGAACAGCAGGATTTCCCAACGGCAGCTTGGGAAAAAGACCCAGTGGCAGCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300571.7
ENST00000535671.5
ENST00000569479.5
ENST00000569847.1
CDS TCA 72 bp GACCACCACCCGAGTTCACCCTTGTTCAGTGGGTCCTaGCGGCATCTGGGAATGAGAGATTTTGATCACAGA +
Preference number: 6 (lower is better)
Translates to: DHHPSSPLFSGS*RHLGMRDFDHR
Trigger: TCTGTGATCAAAATCTCTCATTCCCAGATGCCGTCAGGACCCACTGAACAAGGGTGAACTCGGGTGGTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569102.1
CDS TCA 72 bp GAACTTAAAGTCTTTCACCAAAGGTGTCTTCCTGTGTaGCTTGGCGGAGCAGTTGGGATGGTCCCACCGTTG +
Preference number: 6 (lower is better)
Translates to: ELKVFHQRCLPV*LGGAVGMVPPL
Trigger: CAACGGTGGGACCATCCCAACTGCTCCGCCAAGTCACACAGGAAGACACCTTTGGTGAAAGACTTTAAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300571.7
ENST00000562348.1
ENST00000569479.5
ENST00000569847.1
CDS CCA 72 bp GAGCTCTCATCTTTCTCTCTGATGCCACGAACATTCTaGATGAGAACCATGGCTGTAGACTCAAGCTCGACA +
Preference number: 6 (lower is better)
Translates to: ELSSFSLMPRTF*MRTMAVDSSST
Trigger: TGTCGAGCTTGAGTCTACAGCCATGGTTCTCATCCAGAATGTTCGTGGCATCAGAGAGAAAGATGAGAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568214.1