Pregenerated sensors for GPR89A (Homo sapiens)
Ensembl gene IDs: ENSG00000117262Ensembl transcript IDs: ENST00000465185.2, ENST00000478703.5, ENST00000492401.2, ENST00000493684.5
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GAGGCTTTGAGAGGTTCGATAACTTGCTCAAAGTCACACAGCTGGTaGGTAGGCTCAGGTTTATCTGTTTCCAAAGCCTATGTTAACCTC | + |
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Preference number: 5 (lower is better) Translates to: EALRGSITCSKSHSW*VGSGLSVSKAYVNL Trigger: GAGGTTAACATAGGCTTTGGAAACAGATAAACCTGAGCCTACTCACCAGCTGTGTGACTTTGAGCAAGTTATCGAACCTCTCAAAGCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465185.2 |
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| CDS GCA 90 bp | CCTCCCTCCTCTCTGATTTTTCCCACTATTACCCAAATCAGTAAGTaGCCTTCAGTTCCTTCCTTAATAGTGGCTACTACTGGCATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PPSSLIFPTITQISK*PSVPSLIVATTGMV Trigger: AACCATGCCAGTAGTAGCCACTATTAAGGAAGGAACTGAAGGGCACTTACTGATTTGGGTAATAGTGGGAAAAATCAGAGAGGAGGGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000493684.5 |
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| CDS TCA 72 bp | ACAGTTATGTTTCTAGCTTTGCCACAAACCACCGTGTaGCTTAACCTCTCTGGGTCTATTTTCTCATCTGTA | + |
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Preference number: 6 (lower is better) Translates to: TVMFLALPQTTV*LNLSGSIFSSV Trigger: TACAGATGAGAAAATAGACCCAGAGAGGTTAAGTCACACGGTGGTTTGTGGCAAAGCTAGAAACATAACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493684.5 |
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| CDS CAA 90 bp | TATCTTATCTTCATGGGATTGTCTTATGCCATGGTGTTATCCATTTaGCACATAAGGAAAGTGAAGTTTCACTTCCTGATGCTGAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: YLIFMGLSYAMVLSI*HIRKVKFHFLMLKW Trigger: CCACTTCAGCATCAGGAAGTGAAACTTCACTTTCCTTATGTGCAAAATGGATAACACCATGGCATAAGACAATCCCATGAAGATAAGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000478703.5 ENST00000492401.2 |
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