RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPR85 (Homo sapiens)

Ensembl gene IDs: ENSG00000164604

Ensembl transcript IDs: ENST00000297146.7, ENST00000424100.2, ENST00000438062.5, ENST00000449591.2, ENST00000449735.1, ENST00000487573.1, ENST00000610164.1

Found 404 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAATTGCTTTCTGCCTCCAAGCTGAACTTGGAACCTAGGTCTTTCTaGGCACGATGTTGTCCTACGTCCCCAGAAGGAGCCAAGGAGGCA +
Preference number: 1 (lower is better)
Translates to: ELLSASKLNLEPRSF*ARCCPTSPEGAKEA
Trigger: TGCCTCCTTGGCTCCTTCTGGGGACGTAGGACAACATCGTGCTCAGAAAGACCTAGGTTCCAAGTTCAGCTTGGAGGCAGAAAGCAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610164.1
3UTR TCA 90 bp CAAATAGCTAGGTGGAGTCAGGCAGCTTCACGTGGCCGTTGCTCTTaGCTCCTCAGTCCCCAACTCTTAACCCATATCTGTTTTCTTGTC +
Preference number: 1 (lower is better)
Translates to: QIARWSQAASRGRCS*LLSPQLLTHICFLV
Trigger: GACAAGAAAACAGATATGGGTTAAGAGTTGGGGACTGAGGAGTCAAGAGCAACGGCCACGTGAAGCTGCCTGACTCCACCTAGCTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297146.7
3UTR TCA 90 bp GGAGCTGGTTCTAAAATACAACACGCTGATTCGTGTAAGTGTGGGTaGAAGGTTCCTGGTGCTTTGAATAGAATGAGGGGGTTCCCTCTC +
Preference number: 1 (lower is better)
Translates to: GAGSKIQHADSCKCG*KVPGALNRMRGFPL
Trigger: GAGAGGGAACCCCCTCATTCTATTCAAAGCACCAGGAACCTTTCACCCACACTTACACGAATCAGCGTGTTGTATTTTAGAACCAGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610164.1
3UTR GCA 90 bp TGTTTCACAAGTTACTTGGGAGGGCCCCCGCAAGTCATCGTAAGATaGACACAAATAAGTCATTCCTTTGATTGCATTTTACCCACGCAT +
Preference number: 1 (lower is better)
Translates to: CFTSYLGGPPQVIVR*TQISHSFDCILPTH
Trigger: ATGCGTGGGTAAAATGCAATCAAAGGAATGACTTATTTGTGTGCATCTTACGATGACTTGCGGGGGCCCTCCCAAGTAACTTGTGAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610164.1
3UTR TCA 90 bp AAGGTTCCTGGTGCTTTGAATAGAATGAGGGGGTTCCCTCTCAGTTaGGGGAGTATGTATAATATATACGAGATCCCAAATAACACTGGG +
Preference number: 1 (lower is better)
Translates to: KVPGALNRMRGFPLS*GSMYNIYEIPNNTG
Trigger: CCCAGTGTTATTTGGGATCTCGTATATATTATACATACTCCCTCAACTGAGAGGGAACCCCCTCATTCTATTCAAAGCACCAGGAACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610164.1
3UTR GCA 90 bp ACTCCTCAGTCCCCAACTCTTAACCCATATCTGTTTTCTTGTCTATaGAATGGTGAACCTGTTCTCTCTGGCCTTAAGATTATTGCTGAA +
Preference number: 1 (lower is better)
Translates to: TPQSPTLNPYLFSCL*NGEPVLSGLKIIAE
Trigger: TTCAGCAATAATCTTAAGGCCAGAGAGAACAGGTTCACCATTGCATAGACAAGAAAACAGATATGGGTTAAGAGTTGGGGACTGAGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297146.7
3UTR GCA 90 bp CCGCAAGTCATCGTAAGATGCACACAAATAAGTCATTCCTTTGATTaGATTTTACCCACGCATTTTCATCCTATCTTGCAGGAACATGTG +
Preference number: 1 (lower is better)
Translates to: PQVIVRCTQISHSFD*ILPTHFHPILQEHV
Trigger: CACATGTTCCTGCAAGATAGGATGAAAATGCGTGGGTAAAATGCAATCAAAGGAATGACTTATTTGTGTGCATCTTACGATGACTTGCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610164.1
3UTR GCA 90 bp TTATCCAATAGTGAATACACAGAAGTGAAGAGTTTTGGCTCTGTTTaGAACTGTCCTACAGTAATCCCAGGTGCAACCCAACTCATTATG +
Preference number: 1 (lower is better)
Translates to: LSNSEYTEVKSFGSV*NCPTVIPGATQLIM
Trigger: CATAATGAGTTGGGTTGCACCTGGGATTACTGTAGGACAGTTGCAAACAGAGCCAAAACTCTTCACTTCTGTGTATTCACTATTGGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610164.1
3UTR TCA 90 bp AATGATCTTCCATGCACTTTTAGATGCATGACCATGACCAGTTACTaGTTTGATTTCCCTTGGCTATTTGCTCCAGTGCTAAATAAGATG +
Preference number: 1 (lower is better)
Translates to: NDLPCTFRCMTMTSY*FDFPWLFAPVLNKM
Trigger: CATCTTATTTAGCACTGGAGCAAATAGCCAAGGGAAATCAAATCAGTAACTGGTCATGGTCATGCATCTAAAAGTGCATGGAAGATCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
3UTR GCA 90 bp CTCAGATCTAATCAACTTTGGTGTAAAGTAAAAATGAGGTCAGAATaGTCACTAATTCATGGCTTGAGCTGTCCTTATAAGAGCAAAACT +
Preference number: 1 (lower is better)
Translates to: LRSNQLWCKVKMRSE*SLIHGLSCPYKSKT
Trigger: AGTTTTGCTCTTATAAGGACAGCTCAAGCCATGAATTAGTGAGCATTCTGACCTCATTTTTACTTTACACCAAAGTTGATTAGATCTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297146.7
3UTR CAA 90 bp TTCAGCTCAGATGTGTGCTCAGTCCAAGAGGGAGACACATTATTATaGATAATCAGTCTCACAGGGAAGTTGGACACCCCCTGCCCCGCT +
Preference number: 2 (lower is better)
Translates to: FSSDVCSVQEGDTLL*IISLTGKLDTPCPA
Trigger: AGCGGGGCAGGGGGTGTCCAACTTCCCTGTGAGACTGATTATCAATAATAATGTGTCTCCCTCTTGGACTGAGCACACATCTGAGCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297146.7
3UTR CAA 90 bp GGGGTCTCTGTGGAGAAATGGGCAAGTTACTCACCTCTTTCTGCCTaGGTTAATACCTGCATAGGATTCCACAGTCACAGACTGAATGCC +
Preference number: 2 (lower is better)
Translates to: GVSVEKWASYSPLSA*VNTCIGFHSHRLNA
Trigger: GGCATTCAGTCTGTGACTGTGGAATCCTATGCAGGTATTAACCAAGGCAGAAAGAGGTGAGTAACTTGCCCATTTCTCCACAGAGACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297146.7
3UTR-3UTR TCA 90 bp CTGAGCACGATGTTGTCCTACGTCCCCAGAAGGAGCCAAGGAGGCAGCTATGAAGTGAATACACAGAAGTaGAGAGTTTTGGCTCTGTTT +
Preference number: 2 (lower is better)
Translates to: LSTMLSYVPRRSQGGSYEVNTQK*RVLALF
Trigger: AAACAGAGCCAAAACTCTTCACTTCTGTGTATTCAC...TTCATAGCTGCCTCCTTGGCTCCTTCTGGGGACGTAGGACAACATCGTGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610164.1
3UTR-3UTR TCA 90 bp ATCACCACTATTATGAAAAACAATTTAAAGGCCGTTCAGCTCAGATGTGTGCTCCGTGGCCGTTGCTCTTaGCTCCTCAGTCCCCAACTC +
Preference number: 2 (lower is better)
Translates to: ITTIMKNNLKAVQLRCVLRGRCS*LLSPQL
Trigger: GAGTTGGGGACTGAGGAGTCAAGAGCAACGGCCACG...GAGCACACATCTGAGCTGAACGGCCTTTAAATTGTTTTTCATAATAGTGGTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297146.7
3UTR-3UTR GCA 90 bp ATCACCACTATTATGAAAAACAATTTAAAGGCCGTTCAGCTCAGATGTGTGCTCAAGTTGGACACCCCCTaGCCCGCTACAGTGGGGATG +
Preference number: 2 (lower is better)
Translates to: ITTIMKNNLKAVQLRCVLKLDTP*PATVGM
Trigger: CATCCCCACTGTAGCGGGGCAGGGGGTGTCCAACTT...GAGCACACATCTGAGCTGAACGGCCTTTAAATTGTTTTTCATAATAGTGGTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000297146.7
3UTR-3UTR GCA 90 bp CTGTGGAGAAATGGGCAAGTTACTCACCTCTTTCTGCCTTGGTTAATACCTGCATTCAGCTCAGATGTGTaGTCAGTCCAAGAGGGAGAC +
Preference number: 2 (lower is better)
Translates to: LWRNGQVTHLFLPWLIPAFSSDV*SVQEGD
Trigger: GTCTCCCTCTTGGACTGAGCACACATCTGAGCTGAA...TGCAGGTATTAACCAAGGCAGAAAGAGGTGAGTAACTTGCCCATTTCTCCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297146.7
3UTR-3UTR CCA 90 bp CTGTGGAGAAATGGGCAAGTTACTCACCTCTTTCTGCCTTGGTTAATACCTGCACTCAAAATATGGCTATaGGCCACAATTGCTCAGCAG +
Preference number: 2 (lower is better)
Translates to: LWRNGQVTHLFLPWLIPALKIWL*ATIAQQ
Trigger: CTGCTGAGCAATTGTGGCCCATAGCCATATTTTGAG...TGCAGGTATTAACCAAGGCAGAAAGAGGTGAGTAACTTGCCCATTTCTCCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297146.7
3UTR-3UTR GCA 90 bp AAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAACCTTTGCTGGCAGCTATGGGCCACAATTaGTCAGCAGAGAAGGTTAGT +
Preference number: 2 (lower is better)
Translates to: KKLRAVVQSLLNYKPLLAAMGHN*SAEKVS
Trigger: ACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGC...TGCCAGCAAAGGTTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
3UTR-3UTR TCA 90 bp GATGTGTGCTCAGTCCAAGAGGGAGACACATTATTATTGATAATCAGTCTCACATTGTCTATGCAATGGTaGACCTGTTCTCTCTGGCCT +
Preference number: 2 (lower is better)
Translates to: DVCSVQEGDTLLLIISLTLSMQW*TCSLWP
Trigger: AGGCCAGAGAGAACAGGTTCACCATTGCATAGACAA...TGTGAGACTGATTATCAATAATAATGTGTCTCCCTCTTGGACTGAGCACACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297146.7
3UTR CAA 90 bp GCATGCTTTAATAATAAAAGATATGCACCCTGTTTCACAAGTTACTaGGGAGGGCCCCCGCAAGTCATCGTAAGATGCACACAAATAAGT +
Preference number: 2 (lower is better)
Translates to: ACFNNKRYAPCFTSY*GGPPQVIVRCTQIS
Trigger: ACTTATTTGTGTGCATCTTACGATGACTTGCGGGGGCCCTCCCAAGTAACTTGTGAAACAGGGTGCATATCTTTTATTATTAAAGCATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610164.1
3UTR-3UTR GCA 90 bp AGTAGAATAAATGCTTCACAAATTGTGCAGGATGTCATACTAAGGCTGTGGTCTGCTATGGGCCACAATTaGTCAGCAGAGAAGGTTAGT +
Preference number: 2 (lower is better)
Translates to: SRINASQIVQDVILRLWSAMGHN*SAEKVS
Trigger: ACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGC...AGACCACAGCCTTAGTATGACATCCTGCACAATTTGTGAAGCATTTATTCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
3UTR-3UTR CCA 90 bp TGTTTGCAACTGTCCTACAGTAATCCCAGGTGCAACCCAACTCATTATGACACATTGGAAGTGGATAGTTaGGATATGAAGGGAACTTTG +
Preference number: 2 (lower is better)
Translates to: CLQLSYSNPRCNPTHYDTLEVDS*DMKGTL
Trigger: CAAAGTTCCCTTCATATCCCAACTATCCACTTCCAA...TGTGTCATAATGAGTTGGGTTGCACCTGGGATTACTGTAGGACAGTTGCAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610164.1
3UTR CAA 90 bp GACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTCTaGAATTTCTTCTCAAAATATGGCTATGGGCCACAATTGCTCAGC +
Preference number: 2 (lower is better)
Translates to: DCRMLPKSLKLLIPF*NFFSKYGYGPQLLS
Trigger: GCTGAGCAATTGTGGCCCATAGCCATATTTTGAGAAGAAATTCAAGAATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
3UTR-3UTR TCA 90 bp ATCACCACTATTATGAAAAACAATTTAAAGGCCGTTCAGCTCAGATGTGTGCTCAGAACTGCTCAGTTGTaGCAGGCTGGTACCATTAAT +
Preference number: 2 (lower is better)
Translates to: ITTIMKNNLKAVQLRCVLRTAQL*QAGTIN
Trigger: ATTAATGGTACCAGCCTGTCACAACTGAGCAGTTCT...GAGCACACATCTGAGCTGAACGGCCTTTAAATTGTTTTTCATAATAGTGGTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297146.7
3UTR-3UTR TCA 90 bp TGTGCCTTCAGTAGAATAAATGCTTCACAAATTGTGCAGGATGTCATACTAAGGAGAACTGCTCAGTTGTaGCAGGCTGGTACCATTAAT +
Preference number: 2 (lower is better)
Translates to: CAFSRINASQIVQDVILRRTAQL*QAGTIN
Trigger: ATTAATGGTACCAGCCTGTCACAACTGAGCAGTTCT...CCTTAGTATGACATCCTGCACAATTTGTGAAGCATTTATTCTACTGAAGGCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
3UTR-3UTR GCA 90 bp TTTGACCACATAAAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAAGCTATGGGCCACAATTaGTCAGCAGAGAAGGTTAGT +
Preference number: 2 (lower is better)
Translates to: FDHIKKLRAVVQSLLNYKAMGHN*SAEKVS
Trigger: ACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGC...TTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTTTATGTGGTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
3UTR-3UTR CCA 90 bp AGTAGAATAAATGCTTCACAAATTGTGCAGGATGTCATACTAAGGCTGTGGTCTCTCAAAATATGGCTATaGGCCACAATTGCTCAGCAG +
Preference number: 2 (lower is better)
Translates to: SRINASQIVQDVILRLWSLKIWL*ATIAQQ
Trigger: CTGCTGAGCAATTGTGGCCCATAGCCATATTTTGAG...AGACCACAGCCTTAGTATGACATCCTGCACAATTTGTGAAGCATTTATTCTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
3UTR-3UTR CCA 90 bp CTATTGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTCTCAAAATATGGCTATaGGCCACAATTGCTCAGCAG +
Preference number: 2 (lower is better)
Translates to: LLQRLQNVAQILKTADSILKIWL*ATIAQQ
Trigger: CTGCTGAGCAATTGTGGCCCATAGCCATATTTTGAG...AATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
3UTR-3UTR CCA 90 bp AGTAGAATAAATGCTTCACAAATTGTGCAGGATGTCATACTAAGGCTGTGGTCTATTACAAACCTTTGCTaGCAGTCAGCAGGATCACTC +
Preference number: 2 (lower is better)
Translates to: SRINASQIVQDVILRLWSITNLC*QSAGSL
Trigger: GAGTGATCCTGCTGACTGCCAGCAAAGGTTTGTAAT...AGACCACAGCCTTAGTATGACATCCTGCACAATTTGTGAAGCATTTATTCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
3UTR CAA 90 bp AAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAACCTTaGCTGGCAGTCAGCAGGATCACTCTGAGATTTAAAATAGGATTA +
Preference number: 2 (lower is better)
Translates to: KKLRAVVQSLLNYKP*LAVSRITLRFKIGL
Trigger: TAATCCTATTTTAAATCTCAGAGTGATCCTGCTGACTGCCAGCAAAGGTTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
3UTR-3UTR CCA 90 bp TTTGACCACATAAAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAACTCAAAATATGGCTATaGGCCACAATTGCTCAGCAG +
Preference number: 2 (lower is better)
Translates to: FDHIKKLRAVVQSLLNYKLKIWL*ATIAQQ
Trigger: CTGCTGAGCAATTGTGGCCCATAGCCATATTTTGAG...TTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTTTATGTGGTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
3UTR-3UTR CCA 90 bp ATCACCACTATTATGAAAAACAATTTAAAGGCCGTTCAGCTCAGATGTGTGCTCACTGATTACTGGGGCTaGTTTCTTACCAAAACTGTG +
Preference number: 2 (lower is better)
Translates to: ITTIMKNNLKAVQLRCVLTDYWG*FLTKTV
Trigger: CACAGTTTTGGTAAGAAACCAGCCCCAGTAATCAGT...GAGCACACATCTGAGCTGAACGGCCTTTAAATTGTTTTTCATAATAGTGGTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000297146.7
3UTR-3UTR TCA 90 bp TTCAGTACCAAGGAGACTTTATTGCTAGATCCAACTCACTGTTGTGCATTAAATACCATGACCAGTTACTaGTTTGATTTCCCTTGGCTA +
Preference number: 2 (lower is better)
Translates to: FSTKETLLLDPTHCCALNTMTSY*FDFPWL
Trigger: TAGCCAAGGGAAATCAAATCAGTAACTGGTCATGGT...ATTTAATGCACAACAGTGAGTTGGATCTAGCAATAAAGTCTCCTTGGTACTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297146.7
3UTR-3UTR TCA 90 bp ATGAGGTCAGAATGCTCACTAATTCATGGCTTGAGCTGTCCTTATAAGAGCAAACTGTATCTTAAAGAATaGGACTCACAGACTCTAATG +
Preference number: 2 (lower is better)
Translates to: MRSECSLIHGLSCPYKSKLYLKE*DSQTLM
Trigger: CATTAGAGTCTGTGAGTCTCATTCTTTAAGATACAG...TTTGCTCTTATAAGGACAGCTCAAGCCATGAATTAGTGAGCATTCTGACCTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297146.7
3UTR-3UTR CCA 90 bp TGTGCCTTCAGTAGAATAAATGCTTCACAAATTGTGCAGGATGTCATACTAAGGAGAAACTTAGGGCAGTaGTTCAGTCCCTTCTTAATT +
Preference number: 2 (lower is better)
Translates to: CAFSRINASQIVQDVILRRNLGQ*FSPFLI
Trigger: AATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCT...CCTTAGTATGACATCCTGCACAATTTGTGAAGCATTTATTCTACTGAAGGCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
3UTR-3UTR TCA 90 bp AGATGCACACAAATAAGTCATTCCTTTGATTGCATTTTACCCACGCATTTTCATTCTTGCAGGAACATGTaGGTATGTCAGAAAAGACAC +
Preference number: 2 (lower is better)
Translates to: RCTQISHSFDCILPTHFHSCRNM*VCQKRH
Trigger: GTGTCTTTTCTGACATACTCACATGTTCCTGCAAGA...ATGAAAATGCGTGGGTAAAATGCAATCAAAGGAATGACTTATTTGTGTGCATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610164.1
3UTR-3UTR GCA 90 bp CAAAACCATAATAAAGCTAGTCTTCCTAGTTTGTGCTTGCCTCCCAAATTAAAACCATGCACTTTTAGATaGATGACCATGACCAGTTAC +
Preference number: 2 (lower is better)
Translates to: QNHNKASLPSLCLPPKLKPCTFR*MTMTSY
Trigger: GTAACTGGTCATGGTCATGCATCTAAAAGTGCATGG...TTTTAATTTGGGAGGCAAGCACAAACTAGGAAGACTAGCTTTATTATGGTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297146.7
3UTR-3UTR GCA 90 bp ATCACCACTATTATGAAAAACAATTTAAAGGCCGTTCAGCTCAGATGTGTGCTCAAAATGAGGTCAGAATaGTCACTAATTCATGGCTTG +
Preference number: 2 (lower is better)
Translates to: ITTIMKNNLKAVQLRCVLKMRSE*SLIHGL
Trigger: CAAGCCATGAATTAGTGAGCATTCTGACCTCATTTT...GAGCACACATCTGAGCTGAACGGCCTTTAAATTGTTTTTCATAATAGTGGTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297146.7
3UTR-3UTR CCA 90 bp ACCAAGTTTTCAGCTGATAGGCGATTAGGGAGTTTTATTGTATTCCAATTAAGGAGAAACTTAGGGCAGTaGTTCAGTCCCTTCTTAATT +
Preference number: 2 (lower is better)
Translates to: TKFSADRRLGSFIVFQLRRNLGQ*FSPFLI
Trigger: AATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCT...CCTTAATTGGAATACAATAAAACTCCCTAATCGCCTATCAGCTGAAAACTTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610164.1
3UTR-3UTR TCA 90 bp AATCAGTTAACTTCTATAGACAATCCTGGTGAGAAATCCAACCAGCTGATATCTACTACTGTTACCAGTTaGGTTACAAATGGCATTGAT +
Preference number: 2 (lower is better)
Translates to: NQLTSIDNPGEKSNQLISTTVTS*VTNGID
Trigger: ATCAATGCCATTTGTAACTCAACTGGTAACAGTAGT...AGATATCAGCTGGTTGGATTTCTCACCAGGATTGTCTATAGAAGTTAACTGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297146.7
3UTR-3UTR GCA 90 bp ACAGAGCATTTAGCACTGATACTTAGCACCTGCTACTTTCATTATCTAGTTTTTTTAATTACAAACCTTTaGTGGCAGTCAGCAGGATCA +
Preference number: 2 (lower is better)
Translates to: TEHLALILSTCYFHYLVFLITNL*WQSAGS
Trigger: TGATCCTGCTGACTGCCAGCAAAGGTTTGTAATTAA...AAAAACTAGATAATGAAAGTAGCAGGTGCTAAGTATCAGTGCTAAATGCTCTGT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
3UTR TCA 72 bp AGGTGGAGTCAGGCAGCTTCACGTGGCCGTTGCTCTTaGCTCCTCAGTCCCCAACTCTTAACCCATATCTGT +
Preference number: 3 (lower is better)
Translates to: RWSQAASRGRCS*LLSPQLLTHIC
Trigger: ACAGATATGGGTTAAGAGTTGGGGACTGAGGAGTCAAGAGCAACGGCCACGTGAAGCTGCCTGACTCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297146.7
3UTR TCA 72 bp TCTGCCTCCAAGCTGAACTTGGAACCTAGGTCTTTCTaGGCACGATGTTGTCCTACGTCCCCAGAAGGAGCC +
Preference number: 3 (lower is better)
Translates to: SASKLNLEPRSF*ARCCPTSPEGA
Trigger: GGCTCCTTCTGGGGACGTAGGACAACATCGTGCTCAGAAAGACCTAGGTTCCAAGTTCAGCTTGGAGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610164.1
3UTR-3UTR CAA 90 bp CCTCTTTCTGCCTTGGTTAATACCTGCATAGGATTCCACAGTCACAGACTGAATAGCTTCACGTGGCCGTaGCTCTTGACTCCTCAGTCC +
Preference number: 3 (lower is better)
Translates to: PLSALVNTCIGFHSHRLNSFTWP*LLTPQS
Trigger: GGACTGAGGAGTCAAGAGCAACGGCCACGTGAAGCT...ATTCAGTCTGTGACTGTGGAATCCTATGCAGGTATTAACCAAGGCAGAAAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297146.7
3UTR TCA 72 bp TTCACTGAGGATGTGTCTTGTCAACTGCTTCCTGCTTaGCCTGCAAATGCCAAGTTAGTCAGGAGTAGGCTT +
Preference number: 3 (lower is better)
Translates to: FTEDVSCQLLPA*PANAKLVRSRL
Trigger: AAGCCTACTCCTGACTAACTTGGCATTTGCAGGTCAAGCAGGAAGCAGTTGACAAGACACATCCTCAGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297146.7
3UTR TCA 72 bp CTGTTACCAGTTGAGTTACAAATGGCATTGATTCACTaGGGATGTGTCTTGTCAACTGCTTCCTGCTTGACC +
Preference number: 3 (lower is better)
Translates to: LLPVELQMALIH*GCVLSTASCLT
Trigger: GGTCAAGCAGGAAGCAGTTGACAAGACACATCCTCAGTGAATCAATGCCATTTGTAACTCAACTGGTAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297146.7
3UTR TCA 72 bp TCTAAAATACAACACGCTGATTCGTGTAAGTGTGGGTaGAAGGTTCCTGGTGCTTTGAATAGAATGAGGGGG +
Preference number: 3 (lower is better)
Translates to: SKIQHADSCKCG*KVPGALNRMRG
Trigger: CCCCCTCATTCTATTCAAAGCACCAGGAACCTTTCACCCACACTTACACGAATCAGCGTGTTGTATTTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610164.1
3UTR GCA 72 bp AGTGAATACACAGAAGTGAAGAGTTTTGGCTCTGTTTaGAACTGTCCTACAGTAATCCCAGGTGCAACCCAA +
Preference number: 3 (lower is better)
Translates to: SEYTEVKSFGSV*NCPTVIPGATQ
Trigger: TTGGGTTGCACCTGGGATTACTGTAGGACAGTTGCAAACAGAGCCAAAACTCTTCACTTCTGTGTATTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610164.1
3UTR TCA 72 bp CCATGCACTTTTAGATGCATGACCATGACCAGTTACTaGTTTGATTTCCCTTGGCTATTTGCTCCAGTGCTA +
Preference number: 3 (lower is better)
Translates to: PCTFRCMTMTSY*FDFPWLFAPVL
Trigger: TAGCACTGGAGCAAATAGCCAAGGGAAATCAAATCAGTAACTGGTCATGGTCATGCATCTAAAAGTGCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
3UTR TCA 72 bp GGAGTAGGCTTAAATAAAAGTCACTGCAGTTCAGCCTaGCTTACTGATTACTGGGGCTGGTTTCTTACCAAA +
Preference number: 3 (lower is better)
Translates to: GVGLNKSHCSSA*LTDYWGWFLTK
Trigger: TTTGGTAAGAAACCAGCCCCAGTAATCAGTAAGTCAGGCTGAACTGCAGTGACTTTTATTTAAGCCTACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297146.7
3UTR GCA 72 bp CCCACTAGATTAAGAAATCTAAATGAGAGACTGTTCTaGTTTGTTTTCCACTATGCACTCAGCACCAAGCCC +
Preference number: 3 (lower is better)
Translates to: PTRLRNLNERLF*FVFHYALSTKP
Trigger: GGGCTTGGTGCTGAGTGCATAGTGGAAAACAAAGCAGAACAGTCTCTCATTTAGATTTCTTAATCTAGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297146.7
ENST00000610164.1
3UTR GCA 72 bp AGTTACTTGGGAGGGCCCCCGCAAGTCATCGTAAGATaGACACAAATAAGTCATTCCTTTGATTGCATTTTA +
Preference number: 3 (lower is better)
Translates to: SYLGGPPQVIVR*TQISHSFDCIL
Trigger: TAAAATGCAATCAAAGGAATGACTTATTTGTGTGCATCTTACGATGACTTGCGGGGGCCCTCCCAAGTAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610164.1
3UTR-3UTR CAA 90 bp TGTTTGCAACTGTCCTACAGTAATCCCAGGTGCAACCCAACTCATTATGACACACATTTTCATCCTATCTaGCAGGAACATGTGAGTATG +
Preference number: 3 (lower is better)
Translates to: CLQLSYSNPRCNPTHYDTHFHPI*QEHVSM
Trigger: CATACTCACATGTTCCTGCAAGATAGGATGAAAATG...TGTGTCATAATGAGTTGGGTTGCACCTGGGATTACTGTAGGACAGTTGCAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610164.1
3UTR GCA 72 bp TCCCCAACTCTTAACCCATATCTGTTTTCTTGTCTATaGAATGGTGAACCTGTTCTCTCTGGCCTTAAGATT +
Preference number: 3 (lower is better)
Translates to: SPTLNPYLFSCL*NGEPVLSGLKI
Trigger: AATCTTAAGGCCAGAGAGAACAGGTTCACCATTGCATAGACAAGAAAACAGATATGGGTTAAGAGTTGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297146.7
3UTR-3UTR CAA 90 bp AAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAACCTTTGCTGGCAAAAGACTGCAGAATGTaGCCCAAATCCTTAAAACTG +
Preference number: 3 (lower is better)
Translates to: KKLRAVVQSLLNYKPLLAKDCRM*PKSLKL
Trigger: CAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTT...TGCCAGCAAAGGTTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
3UTR-3UTR CAA 90 bp AGTAGAATAAATGCTTCACAAATTGTGCAGGATGTCATACTAAGGCTGTGGTCTCTGGTACCATTAATGTaGCCTCCCAGACCAATATCT +
Preference number: 3 (lower is better)
Translates to: SRINASQIVQDVILRLWSLVPLM*PPRPIS
Trigger: AGATATTGGTCTGGGAGGCAACATTAATGGTACCAG...AGACCACAGCCTTAGTATGACATCCTGCACAATTTGTGAAGCATTTATTCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
3UTR TCA 72 bp GATTACTACTGTTACCAGTTGAGTTACAAATGGCATTaGTTCACTGAGGATGTGTCTTGTCAACTGCTTCCT +
Preference number: 3 (lower is better)
Translates to: DYYCYQLSYKWH*FTEDVSCQLLP
Trigger: AGGAAGCAGTTGACAAGACACATCCTCAGTGAATCAATGCCATTTGTAACTCAACTGGTAACAGTAGTAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297146.7
3UTR-3UTR CAA 90 bp AATCAGTTAACTTCTATAGACAATCCTGGTGAGAAATCCAACCAGCTGATATCTAACCAATATACTGCTTaGGAATGCTCCCCAGAACTT +
Preference number: 3 (lower is better)
Translates to: NQLTSIDNPGEKSNQLISNQYTA*ECSPEL
Trigger: AAGTTCTGGGGAGCATTCCAAAGCAGTATATTGGTT...AGATATCAGCTGGTTGGATTTCTCACCAGGATTGTCTATAGAAGTTAACTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297146.7
3UTR GCA 72 bp GTAAACTCTAATTGGAACCAATATACTGCTTTGGAATaGTCCCCAGAACTTACAAGGCGGTTTTTAAAGTGT +
Preference number: 3 (lower is better)
Translates to: VNSNWNQYTALE*SPELTRRFLKC
Trigger: ACACTTTAAAAACCGCCTTGTAAGTTCTGGGGAGCATTCCAAAGCAGTATATTGGTTCCAATTAGAGTTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
3UTR CCA 72 bp GATTCCATTCTTGAATTTCTTCTCAAAATATGGCTATaGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTC +
Preference number: 3 (lower is better)
Translates to: DSILEFLLKIWL*ATIAQQRRLVF
Trigger: GAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATTTTGAGAAGAAATTCAAGAATGGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
3UTR TCA 72 bp AGTCATCGTAAGATGCACACAAATAAGTCATTCCTTTaGTTGCATTTTACCCACGCATTTTCATCCTATCTT +
Preference number: 3 (lower is better)
Translates to: SHRKMHTNKSFL*LHFTHAFSSYL
Trigger: AAGATAGGATGAAAATGCGTGGGTAAAATGCAATCAAAGGAATGACTTATTTGTGTGCATCTTACGATGACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610164.1
3UTR GCA 72 bp AATCAACTTTGGTGTAAAGTAAAAATGAGGTCAGAATaGTCACTAATTCATGGCTTGAGCTGTCCTTATAAG +
Preference number: 3 (lower is better)
Translates to: NQLWCKVKMRSE*SLIHGLSCPYK
Trigger: CTTATAAGGACAGCTCAAGCCATGAATTAGTGAGCATTCTGACCTCATTTTTACTTTACACCAAAGTTGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297146.7
3UTR GCA 72 bp CAAGGAGACTTTATTGCTAGATCCAACTCACTGTTGTaGATTAAATTTTGTCTCAGATCTAATCAACTTTGG +
Preference number: 3 (lower is better)
Translates to: QGDFIARSNSLL*IKFCLRSNQLW
Trigger: CCAAAGTTGATTAGATCTGAGACAAAATTTAATGCACAACAGTGAGTTGGATCTAGCAATAAAGTCTCCTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297146.7
3UTR CCA 72 bp TCACAAGGTTTTAGAACCATAAATAACCCACAATTCTaGTTACCATCTACCTTGATTAATGTCTTTAGCCAG +
Preference number: 3 (lower is better)
Translates to: SQGFRTINNPQF*LPSTLINVFSQ
Trigger: CTGGCTAAAGACATTAATCAAGGTAGATGGTAACCAGAATTGTGGGTTATTTATGGTTCTAAAACCTTGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610164.1
3UTR TCA 72 bp AATCATAAATCAGTTAACTTCTATAGACAATCCTGGTaGGAAATCCAACCAGCTGATATAAGGCGGTTTTTA +
Preference number: 3 (lower is better)
Translates to: NHKSVNFYRQSW*EIQPADIRRFL
Trigger: TAAAAACCGCCTTATATCAGCTGGTTGGATTTCTCACCAGGATTGTCTATAGAAGTTAACTGATTTATGATT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR GCA 90 bp GGAGTCAGGCAGCTTCACGTGGCCGTTGCTCTTGACTCCTCAGTCCCCAACTCTAGCCTGACACGTGGGTaGTTAGGAATGCCTCTAGAA +
Preference number: 4 (lower is better)
Translates to: GVRQLHVAVALDSSVPNSSLTRG*LGMPLE
Trigger: TTCTAGAGGCATTCCTAAGCACCCACGTGTCAGGCT...AGAGTTGGGGACTGAGGAGTCAAGAGCAACGGCCACGTGAAGCTGCCTGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CCA 90 bp GCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATGCGGCGCCTGCGCGCTaGAGCCTCCTTGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: AMGHNCSAEKVSFHKAKDAAPAR*SLLELQ
Trigger: CTGGAGCTCAAGGAGGCTCCAGCGCGCAGGCGCCGC...ATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424100.2
CDS-3UTR GCA 90 bp GGAGTCAGGCAGCTTCACGTGGCCGTTGCTCTTGACTCCTCAGTCCCCAACTCTGCTTCCTGCTTGACCTaGAAATGCCAAGTTAGTCAG +
Preference number: 4 (lower is better)
Translates to: GVRQLHVAVALDSSVPNSASCLT*KCQVSQ
Trigger: CTGACTAACTTGGCATTTGCAGGTCAAGCAGGAAGC...AGAGTTGGGGACTGAGGAGTCAAGAGCAACGGCCACGTGAAGCTGCCTGACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR TCA 90 bp TGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTCTTGGCGCTGGAGCCTCCTTaGGCTCCAGCCGCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: CKDCRMLPKSLKLLIPFLALEPP*APAASS
Trigger: GGAGGACGCGGCTGGAGCTCAAGGAGGCTCCAGCGC...CAAGAATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424100.2
CDS-3UTR GCA 90 bp CTGAGCACGATGTTGTCCTACGTCCCCAGAAGGAGCCAAGGAGGCAGCTATGAAAGATTGCTTCTGTGCTaGAAAGGAACCGTTCCCGGT +
Preference number: 4 (lower is better)
Translates to: LSTMLSYVPRRSQGGSYERLLLC*KGTVPG
Trigger: ACCGGGAACGGTTCCTTTGCAGCACAGAAGCAATCT...TTCATAGCTGCCTCCTTGGCTCCTTCTGGGGACGTAGGACAACATCGTGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR TCA 90 bp GCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATGCAGGAACCCCTACCTaGCTCCAGAGCTGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: AMGHNCSAEKVSFHKAKDAGTPT*LQSWLG
Trigger: ACCCAGCCAGCTCTGGAGTCAGGTAGGGGTTCCTGC...ATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424100.2
CDS-3UTR GCA 90 bp GGAGTCAGGCAGCTTCACGTGGCCGTTGCTCTTGACTCCTCAGTCCCCAACTCTCAAAATGTTGTCAGCTaGATGGCTATAGTTCGCCAT +
Preference number: 4 (lower is better)
Translates to: GVRQLHVAVALDSSVPNSQNVVS*MAIVRH
Trigger: ATGGCGAACTATAGCCATGCAGCTGACAACATTTTG...AGAGTTGGGGACTGAGGAGTCAAGAGCAACGGCCACGTGAAGCTGCCTGACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR GCA 90 bp GGAGTCAGGCAGCTTCACGTGGCCGTTGCTCTTGACTCCTCAGTCCCCAACTCTGAAAGGCAATCACTTTaGAAGTCAGAGTCCCATAAG +
Preference number: 4 (lower is better)
Translates to: GVRQLHVAVALDSSVPNSERQSL*KSESHK
Trigger: CTTATGGGACTCTGACTTGCAAAGTGATTGCCTTTC...AGAGTTGGGGACTGAGGAGTCAAGAGCAACGGCCACGTGAAGCTGCCTGACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR GCA 90 bp GGAGTCAGGCAGCTTCACGTGGCCGTTGCTCTTGACTCCTCAGTCCCCAACTCTCCATGCACTTTTAGATaGATGACCATGACCAGTTAC +
Preference number: 4 (lower is better)
Translates to: GVRQLHVAVALDSSVPNSPCTFR*MTMTSY
Trigger: GTAACTGGTCATGGTCATGCATCTAAAAGTGCATGG...AGAGTTGGGGACTGAGGAGTCAAGAGCAACGGCCACGTGAAGCTGCCTGACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR GCA 90 bp ATATGCACCCTGTTTCACAAGTTACTTGGGAGGGCCCCCGCAAGTCATCGTAAGTCTGCCTGTGGTGTTTaGATTTTGCCTGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: ICTLFHKLLGRAPASHRKSACGV*ILPDAQ
Trigger: CTGGGCATCAGGCAAAATGCAAACACCACAGGCAGA...CTTACGATGACTTGCGGGGGCCCTCCCAAGTAACTTGTGAAACAGGGTGCATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR CCA 90 bp AATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTCAATTGGCAGCTGCCTaGCCACTGGCTCCAGGACCA +
Preference number: 4 (lower is better)
Translates to: NMAMGHNCSAEKVSFHKAQLAAA*PLAPGP
Trigger: TGGTCCTGGAGCCAGTGGCCAGGCAGCTGCCAATTG...AGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CCA 90 bp CCTCTTTCTGCCTTGGTTAATACCTGCATAGGATTCCACAGTCACAGACTGAATGCCCAGCAAGGTGGGTaGTGTGGGACCCCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: PLSALVNTCIGFHSHRLNAQQGG*CGTPSK
Trigger: TTTGGAAGGGGTCCCACACCACCCACCTTGCTGGGC...ATTCAGTCTGTGACTGTGGAATCCTATGCAGGTATTAACCAAGGCAGAAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CCA 90 bp GCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATGCCCAGCAAGGTGGGTaGTGTGGGACCCCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: AMGHNCSAEKVSFHKAKDAQQGG*CGTPSK
Trigger: TTTGGAAGGGGTCCCACACCACCCACCTTGCTGGGC...ATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR TCA 90 bp GGAGTCAGGCAGCTTCACGTGGCCGTTGCTCTTGACTCCTCAGTCCCCAACTCTAACAAATTGCAGATCTaGGGATATCTGAACAGCAAA +
Preference number: 4 (lower is better)
Translates to: GVRQLHVAVALDSSVPNSNKLQI*GYLNSK
Trigger: TTTGCTGTTCAGATATCCTCAGATCTGCAATTTGTT...AGAGTTGGGGACTGAGGAGTCAAGAGCAACGGCCACGTGAAGCTGCCTGACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR GCA 90 bp CTGAGCACGATGTTGTCCTACGTCCCCAGAAGGAGCCAAGGAGGCAGCTATGAACAAAATGTTGTCAGCTaGATGGCTATAGTTCGCCAT +
Preference number: 4 (lower is better)
Translates to: LSTMLSYVPRRSQGGSYEQNVVS*MAIVRH
Trigger: ATGGCGAACTATAGCCATGCAGCTGACAACATTTTG...TTCATAGCTGCCTCCTTGGCTCCTTCTGGGGACGTAGGACAACATCGTGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR CCA 90 bp ATATGCACCCTGTTTCACAAGTTACTTGGGAGGGCCCCCGCAAGTCATCGTAAGAGCATGAAAGCAGTGTaGAAACAGGACAAAACCCCC +
Preference number: 4 (lower is better)
Translates to: ICTLFHKLLGRAPASHRKSMKAV*KQDKTP
Trigger: GGGGGTTTTGTCCTGTTTCCACACTGCTTTCATGCT...CTTACGATGACTTGCGGGGGCCCTCCCAAGTAACTTGTGAAACAGGGTGCATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR TCA 90 bp GCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATAAAGAAGGGTTGTGCTaGAACAGCGCCTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: AMGHNCSAEKVSFHKAKDKEGLC*NSASAP
Trigger: GGGAGCTGAGGCGCTGTTTCAGCACAACCCTTCTTT...ATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR GCA 90 bp CTGAGCACGATGTTGTCCTACGTCCCCAGAAGGAGCCAAGGAGGCAGCTATGAAAGTTTTGGCTCTGTTTaGAACTGTCCTACAGTAATC +
Preference number: 4 (lower is better)
Translates to: LSTMLSYVPRRSQGGSYESFGSV*NCPTVI
Trigger: GATTACTGTAGGACAGTTGCAAACAGAGCCAAAACT...TTCATAGCTGCCTCCTTGGCTCCTTCTGGGGACGTAGGACAACATCGTGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR CCA 90 bp CTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATTATCCTGCTAGCCAATTaGCAGCTGCCTGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: LWATIAQQRRLVFTRLKIILLAN*QLPGHW
Trigger: CCAGTGGCCAGGCAGCTGCCAATTGGCTAGCAGGAT...AATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CCA 90 bp AAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAACCTTTGCTGGCAGCAAGGTGGGTGGTGTaGGACCCCTTCCAAATCCTG +
Preference number: 4 (lower is better)
Translates to: KKLRAVVQSLLNYKPLLAARWVV*DPFQIL
Trigger: CAGGATTTGGAAGGGGTCCCACACCACCCACCTTGC...TGCCAGCAAAGGTTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CCA 90 bp GAATTTCTTCTCAAAATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGCCCAGCAAGGTGGGTaGTGTGGGACCCCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: EFLLKIWLWATIAQQRRLAQQGG*CGTPSK
Trigger: TTTGGAAGGGGTCCCACACCACCCACCTTGCTGGGC...TAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATTTTGAGAAGAAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR TCA 90 bp CTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATTAAAGAAGGGTTGTGCTaGAACAGCGCCTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LWATIAQQRRLVFTRLKIKEGLC*NSASAP
Trigger: GGGAGCTGAGGCGCTGTTTCAGCACAACCCTTCTTT...AATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR GCA 90 bp CTGTGGAGAAATGGGCAAGTTACTCACCTCTTTCTGCCTTGGTTAATACCTGCAGAGAGATTGCTTCTGTaGTGCAAAGGAACCGTTCCC +
Preference number: 4 (lower is better)
Translates to: LWRNGQVTHLFLPWLIPAERLLL*CKGTVP
Trigger: GGGAACGGTTCCTTTGCAGCACAGAAGCAATCTCTC...TGCAGGTATTAACCAAGGCAGAAAGAGGTGAGTAACTTGCCCATTTCTCCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CCA 90 bp TTGGAATGCTCCCCAGAACTTACAAGGCGGTTTTTAAAGTGTGATATTCCAATACAATTGGCAGCTGCCTaGCCACTGGCTCCAGGACCA +
Preference number: 4 (lower is better)
Translates to: LECSPELTRRFLKCDIPIQLAAA*PLAPGP
Trigger: TGGTCCTGGAGCCAGTGGCCAGGCAGCTGCCAATTG...TATTGGAATATCACACTTTAAAAACCGCCTTGTAAGTTCTGGGGAGCATTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR CCA 90 bp GAATTTCTTCTCAAAATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGCAAGGTGGGTGGTGTaGGACCCCTTCCAAATCCTG +
Preference number: 4 (lower is better)
Translates to: EFLLKIWLWATIAQQRRLARWVV*DPFQIL
Trigger: CAGGATTTGGAAGGGGTCCCACACCACCCACCTTGC...TAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATTTTGAGAAGAAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CCA 90 bp TGTTTGCAACTGTCCTACAGTAATCCCAGGTGCAACCCAACTCATTATGACACAGTTTCACAAGTTACTTaGGAGGGCCCCCGCAAGTCA +
Preference number: 4 (lower is better)
Translates to: CLQLSYSNPRCNPTHYDTVSQVT*EGPRKS
Trigger: TGACTTGCGGGGGCCCTCCCAAGTAACTTGTGAAAC...TGTGTCATAATGAGTTGGGTTGCACCTGGGATTACTGTAGGACAGTTGCAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR TCA 90 bp TGTTTGCAACTGTCCTACAGTAATCCCAGGTGCAACCCAACTCATTATGACACAAAGTCCAGTTCTGGCTaGCTGCTGCTACAAACTGGA +
Preference number: 4 (lower is better)
Translates to: CLQLSYSNPRCNPTHYDTKSSSG*LLLQTG
Trigger: TCCAGTTTGTAGCAGCAGTCAGCCAGAACTGGACTT...TGTGTCATAATGAGTTGGGTTGCACCTGGGATTACTGTAGGACAGTTGCAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR TCA 90 bp CTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATTTGTTTGCATTTTGCCTaGTGCCCAGCAAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: LWATIAQQRRLVFTRLKICLHFA*CPARWV
Trigger: CACCCACCTTGCTGGGCATCAGGCAAAATGCAAACA...AATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR TCA 90 bp TTCAGTACCAAGGAGACTTTATTGCTAGATCCAACTCACTGTTGTGCATTAAATCGTGGCCGTTGCTCTTaGCTCCTCAGTCCCCAACTC +
Preference number: 4 (lower is better)
Translates to: FSTKETLLLDPTHCCALNRGRCS*LLSPQL
Trigger: GAGTTGGGGACTGAGGAGTCAAGAGCAACGGCCACG...ATTTAATGCACAACAGTGAGTTGGATCTAGCAATAAAGTCTCCTTGGTACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR GCA 90 bp GCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATGAGAGATTGCTTCTGTaGTGCAAAGGAACCGTTCCC +
Preference number: 4 (lower is better)
Translates to: AMGHNCSAEKVSFHKAKDERLLL*CKGTVP
Trigger: GGGAACGGTTCCTTTGCAGCACAGAAGCAATCTCTC...ATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR GCA 90 bp AATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTGTTCTGGCTGACTGCTaGTACAAACTGGACTGGCTT +
Preference number: 4 (lower is better)
Translates to: NMAMGHNCSAEKVSFHKAVLADC*YKLDWL
Trigger: AAGCCAGTCCAGTTTGTAGCAGCAGTCAGCCAGAAC...AGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR GCA 90 bp GCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATGTTCTGGCTGACTGCTaGTACAAACTGGACTGGCTT +
Preference number: 4 (lower is better)
Translates to: AMGHNCSAEKVSFHKAKDVLADC*YKLDWL
Trigger: AAGCCAGTCCAGTTTGTAGCAGCAGTCAGCCAGAAC...ATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR GCA 90 bp AATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTGTGGTGTTTGCATTTTaGCTGATGCCCAGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: NMAMGHNCSAEKVSFHKAVVFAF*LMPSKV
Trigger: CACCTTGCTGGGCATCAGGCAAAATGCAAACACCAC...AGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR GCA 90 bp CCTCTTTCTGCCTTGGTTAATACCTGCATAGGATTCCACAGTCACAGACTGAATTCTGCCTGTGGTGTTTaGATTTTGCCTGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: PLSALVNTCIGFHSHRLNSACGV*ILPDAQ
Trigger: CTGGGCATCAGGCAAAATGCAAACACCACAGGCAGA...ATTCAGTCTGTGACTGTGGAATCCTATGCAGGTATTAACCAAGGCAGAAAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR GCA 90 bp TTTGACCACATAAAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAAAAGTTGGACACCCCCTaGCCCGCTACAGTGGGGATG +
Preference number: 4 (lower is better)
Translates to: FDHIKKLRAVVQSLLNYKKLDTP*PATVGM
Trigger: CATCCCCACTGTAGCGGGGCAGGGGGTGTCCAACTT...TTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTTTATGTGGTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CCA 90 bp AATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTACAAAGCCTGACACGTaGGTGCTTAGGAATGCCTCT +
Preference number: 4 (lower is better)
Translates to: NMAMGHNCSAEKVSFHKATKPDT*VLRNAS
Trigger: AGAGGCATTCCTAAGCACCCACGTGTCAGGCTTTGT...AGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CCA 90 bp AATAAAAGATATGCACCCTGTTTCACAAGTTACTTGGGAGGGCCCCCGCAAGTCTTCGCCATAGATGGATaGAGGATAAGGATACAGCCT +
Preference number: 4 (lower is better)
Translates to: NKRYAPCFTSYLGGPPQVFAIDG*RIRIQP
Trigger: AGGCTGTATCCTTATCCTCCATCCATCTATGGCGAA...GACTTGCGGGGGCCCTCCCAAGTAACTTGTGAAACAGGGTGCATATCTTTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR CCA 90 bp TTTGACCACATAAAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAACAATTGGCAGCTGCCTaGCCACTGGCTCCAGGACCA +
Preference number: 4 (lower is better)
Translates to: FDHIKKLRAVVQSLLNYKQLAAA*PLAPGP
Trigger: TGGTCCTGGAGCCAGTGGCCAGGCAGCTGCCAATTG...TTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTTTATGTGGTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CCA 90 bp AGTAGAATAAATGCTTCACAAATTGTGCAGGATGTCATACTAAGGCTGTGGTCTGCAAGGTGGGTGGTGTaGGACCCCTTCCAAATCCTG +
Preference number: 4 (lower is better)
Translates to: SRINASQIVQDVILRLWSARWVV*DPFQIL
Trigger: CAGGATTTGGAAGGGGTCCCACACCACCCACCTTGC...AGACCACAGCCTTAGTATGACATCCTGCACAATTTGTGAAGCATTTATTCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR CCA 90 bp TGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTCTTGTCAGGCAGCTTCACGTaGCCGTTGCTCTTGACTCCT +
Preference number: 4 (lower is better)
Translates to: CKDCRMLPKSLKLLIPFLSGSFT*PLLLTP
Trigger: AGGAGTCAAGAGCAACGGCCACGTGAAGCTGCCTGA...CAAGAATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR TCA 90 bp CTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATTGTCCAAACGGTCGGATaGTACCACAGACACCACAAA +
Preference number: 4 (lower is better)
Translates to: LWATIAQQRRLVFTRLKIVQTVG*YHRHHK
Trigger: TTTGTGGTGTCTGTGGTATCATCCGACCGTTTGGAC...AATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR TCA 90 bp GAATTTCTTCTCAAAATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTATGTTTGCATTTTGCCTaGTGCCCAGCAAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: EFLLKIWLWATIAQQRRLCLHFA*CPARWV
Trigger: CACCCACCTTGCTGGGCATCAGGCAAAATGCAAACA...TAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATTTTGAGAAGAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR TCA 90 bp TTTACCCACGCATTTTCATCCTATCTTGCAGGAACATGTGAGTATGTCAGAAAAAAAGAAGGGTTGTGCTaGAACAGCGCCTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: FTHAFSSYLAGTCEYVRKKEGLC*NSASAP
Trigger: GGGAGCTGAGGCGCTGTTTCAGCACAACCCTTCTTT...TTTTCTGACATACTCACATGTTCCTGCAAGATAGGATGAAAATGCGTGGGTAAA
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR TCA 90 bp GCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATAGCATCCATGGAAGTTaGGGCAAATGGATAAGTGGC +
Preference number: 4 (lower is better)
Translates to: AMGHNCSAEKVSFHKAKDSIHGS*GKWISG
Trigger: GCCACTTATCCATTTGCCTCAACTTCCATGGATGCT...ATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297146.7
ENST00000610164.1
CDS-3UTR TCA 90 bp TGTGCCTTCAGTAGAATAAATGCTTCACAAATTGTGCAGGATGTCATACTAAGGTTTGCCTTAGTGCCTTaGCTGAGCATCCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: CAFSRINASQIVQDVILRFALVP*LSIQAG
Trigger: CCCTGCCTGGATGCTCAGTCAAGGCACTAAGGCAAA...CCTTAGTATGACATCCTGCACAATTTGTGAAGCATTTATTCTACTGAAGGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424100.2
CDS-3UTR TCA 90 bp CTGGTTCTAAAATACAACACGCTGATTCGTGTAAGTGTGGGTGAAAGGTTCCTGTTTCTGCCTCCAAGCTaGACTTGGAACCTAGGTCTT +
Preference number: 4 (lower is better)
Translates to: LVLKYNTLIRVSVGERFLFLPPS*TWNLGL
Trigger: AAGACCTAGGTTCCAAGTTCAGCTTGGAGGCAGAAA...CAGGAACCTTTCACCCACACTTACACGAATCAGCGTGTTGTATTTTAGAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR GCA 90 bp AATAAAAGATATGCACCCTGTTTCACAAGTTACTTGGGAGGGCCCCCGCAAGTCTTTGCCATCAGAATATaGGAAGATGGGGAGAGAGAT +
Preference number: 4 (lower is better)
Translates to: NKRYAPCFTSYLGGPPQVFAIRI*EDGERD
Trigger: ATCTCTCTCCCCATCTTCGCATATTCTGATGGCAAA...GACTTGCGGGGGCCCTCCCAAGTAACTTGTGAAACAGGGTGCATATCTTTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR GCA 90 bp CTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATTTCTGCCTGTGGTGTTTaGATTTTGCCTGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: LWATIAQQRRLVFTRLKISACGV*ILPDAQ
Trigger: CTGGGCATCAGGCAAAATGCAAACACCACAGGCAGA...AATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CCA 90 bp AGATGCACACAAATAAGTCATTCCTTTGATTGCATTTTACCCACGCATTTTCATCAATTGGCAGCTGCCTaGCCACTGGCTCCAGGACCA +
Preference number: 4 (lower is better)
Translates to: RCTQISHSFDCILPTHFHQLAAA*PLAPGP
Trigger: TGGTCCTGGAGCCAGTGGCCAGGCAGCTGCCAATTG...ATGAAAATGCGTGGGTAAAATGCAATCAAAGGAATGACTTATTTGTGTGCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR CCA 90 bp ACCAAGTTTTCAGCTGATAGGCGATTAGGGAGTTTTATTGTATTCCAATTAAGGATCCTGCTAGCCAATTaGCAGCTGCCTGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: TKFSADRRLGSFIVFQLRILLAN*QLPGHW
Trigger: CCAGTGGCCAGGCAGCTGCCAATTGGCTAGCAGGAT...CCTTAATTGGAATACAATAAAACTCCCTAATCGCCTATCAGCTGAAAACTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR CCA 90 bp ACCAAGGAGACTTTATTGCTAGATCCAACTCACTGTTGTGCATTAAATTTTGTCGCAAGGTGGGTGGTGTaGGACCCCTTCCAAATCCTG +
Preference number: 4 (lower is better)
Translates to: TKETLLLDPTHCCALNFVARWVV*DPFQIL
Trigger: CAGGATTTGGAAGGGGTCCCACACCACCCACCTTGC...GACAAAATTTAATGCACAACAGTGAGTTGGATCTAGCAATAAAGTCTCCTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CCA 90 bp AGATGCACACAAATAAGTCATTCCTTTGATTGCATTTTACCCACGCATTTTCATGCCCAGCAAGGTGGGTaGTGTGGGACCCCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: RCTQISHSFDCILPTHFHAQQGG*CGTPSK
Trigger: TTTGGAAGGGGTCCCACACCACCCACCTTGCTGGGC...ATGAAAATGCGTGGGTAAAATGCAATCAAAGGAATGACTTATTTGTGTGCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610164.1
3UTR CAA 72 bp GTGGAGAAATGGGCAAGTTACTCACCTCTTTCTGCCTaGGTTAATACCTGCATAGGATTCCACAGTCACAGA +
Preference number: 4 (lower is better)
Translates to: VEKWASYSPLSA*VNTCIGFHSHR
Trigger: TCTGTGACTGTGGAATCCTATGCAGGTATTAACCAAGGCAGAAAGAGGTGAGTAACTTGCCCATTTCTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR TCA 90 bp ATCACCACTATTATGAAAAACAATTTAAAGGCCGTTCAGCTCAGATGTGTGCTCTGTTTGCATTTTGCCTaGTGCCCAGCAAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: ITTIMKNNLKAVQLRCVLCLHFA*CPARWV
Trigger: CACCCACCTTGCTGGGCATCAGGCAAAATGCAAACA...GAGCACACATCTGAGCTGAACGGCCTTTAAATTGTTTTTCATAATAGTGGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR TCA 90 bp CTATTGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTGCTGGCTGGGTTTATTaGCTGCCCTGTCCAATCCAA +
Preference number: 4 (lower is better)
Translates to: LLQRLQNVAQILKTADSIAGWVY*LPCPIQ
Trigger: TTGGATTGGACAGGGCAGTCAATAAACCCAGCCAGC...AATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424100.2
CDS-3UTR TCA 90 bp TGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTCTTGGAACCTAGGTCTTTCTaGGCACGATGTTGTCCTACG +
Preference number: 4 (lower is better)
Translates to: CKDCRMLPKSLKLLIPFLEPRSF*ARCCPT
Trigger: CGTAGGACAACATCGTGCTCAGAAAGACCTAGGTTC...CAAGAATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR GCA 90 bp CTATTGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTCCAGTTCTGGCTGACTaGTGCTACAAACTGGACTGG +
Preference number: 4 (lower is better)
Translates to: LLQRLQNVAQILKTADSIPVLAD*CYKLDW
Trigger: CCAGTCCAGTTTGTAGCAGCAGTCAGCCAGAACTGG...AATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CCA 90 bp AATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTTTCGCCATAGATGGATaGAGGATAAGGATACAGCCT +
Preference number: 4 (lower is better)
Translates to: NMAMGHNCSAEKVSFHKAFAIDG*RIRIQP
Trigger: AGGCTGTATCCTTATCCTCCATCCATCTATGGCGAA...AGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CCA 90 bp GCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATCTTTCACTAGCAAAATaGAGATCAGGAGGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: AMGHNCSAEKVSFHKAKDLSLAK*RSGGCP
Trigger: TGGGCAACCTCCTGATCTCCATTTTGCTAGTGAAAG...ATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CCA 90 bp CTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATTAGCATGAAAGCAGTGTaGAAACAGGACAAAACCCCC +
Preference number: 4 (lower is better)
Translates to: LWATIAQQRRLVFTRLKISMKAV*KQDKTP
Trigger: GGGGGTTTTGTCCTGTTTCCACACTGCTTTCATGCT...AATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CCA 90 bp ACAGAGCATTTAGCACTGATACTTAGCACCTGCTACTTTCATTATCTAGTTTTTATCCTGCTAGCCAATTaGCAGCTGCCTGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: TEHLALILSTCYFHYLVFILLAN*QLPGHW
Trigger: CCAGTGGCCAGGCAGCTGCCAATTGGCTAGCAGGAT...AAAAACTAGATAATGAAAGTAGCAGGTGCTAAGTATCAGTGCTAAATGCTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CCA 90 bp AATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTCCCTACTGTTGGTGTTaGATATCCCGACAGACTATA +
Preference number: 4 (lower is better)
Translates to: NMAMGHNCSAEKVSFHKAPYCWC*ISRQTI
Trigger: TATAGTCTGTCGGGATATCCAACACCAACAGTAGGG...AGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424100.2
3UTR CAA 72 bp AATAATAAAAGATATGCACCCTGTTTCACAAGTTACTaGGGAGGGCCCCCGCAAGTCATCGTAAGATGCACA +
Preference number: 4 (lower is better)
Translates to: NNKRYAPCFTSY*GGPPQVIVRCT
Trigger: TGTGCATCTTACGATGACTTGCGGGGGCCCTCCCAAGTAACTTGTGAAACAGGGTGCATATCTTTTATTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR TCA 90 bp AAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAACCTTTGCTGGCACAAAGAGAACTGATCTaGTCTGCAGTCATGCTTCCT +
Preference number: 4 (lower is better)
Translates to: KKLRAVVQSLLNYKPLLAQRELI*SAVMLP
Trigger: AGGAAGCATGACTGCAGATCAGATCAGTTCTCTTTG...TGCCAGCAAAGGTTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR TCA 90 bp AAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAACCTTTGCTGGCAATCCACAAAGAGAACTaGTCTGATCTGCAGTCATGC +
Preference number: 4 (lower is better)
Translates to: KKLRAVVQSLLNYKPLLAIHKEN*SDLQSC
Trigger: GCATGACTGCAGATCAGATCAGTTCTCTTTGTGGAT...TGCCAGCAAAGGTTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR TCA 90 bp AATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTTGTTGGAAGGTGCATTaGTCTTCCTCCCTAATGAAT +
Preference number: 4 (lower is better)
Translates to: NMAMGHNCSAEKVSFHKACWKVH*SSSLMN
Trigger: ATTCATTAGGGAGGAAGATCAATGCACCTTCCAACA...AGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR TCA 90 bp CTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATTCGAAAAATATCAGCTTaGGGTAGACAAGCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: LWATIAQQRRLVFTRLKIRKISA*GRQAVW
Trigger: CCACACAGCTTGTCTACCTCAAGCTGATATTTTTCG...AATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR TCA 90 bp AAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAACCTTTGCTGGCACGAAAAATATCAGCTTaGGGTAGACAAGCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: KKLRAVVQSLLNYKPLLARKISA*GRQAVW
Trigger: CCACACAGCTTGTCTACCTCAAGCTGATATTTTTCG...TGCCAGCAAAGGTTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR TCA 90 bp ATAGAATTAACTACATGGGAGCTGGTTCTAAAATACAACACGCTGATTCGTGTATGTTTGCATTTTGCCTaGTGCCCAGCAAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: IELTTWELVLKYNTLIRVCLHFA*CPARWV
Trigger: CACCCACCTTGCTGGGCATCAGGCAAAATGCAAACA...TACACGAATCAGCGTGTTGTATTTTAGAACCAGCTCCCATGTAGTTAATTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR TCA 90 bp ACAGAGCATTTAGCACTGATACTTAGCACCTGCTACTTTCATTATCTAGTTTTTAAAGAAGGGTTGTGCTaGAACAGCGCCTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: TEHLALILSTCYFHYLVFKEGLC*NSASAP
Trigger: GGGAGCTGAGGCGCTGTTTCAGCACAACCCTTCTTT...AAAAACTAGATAATGAAAGTAGCAGGTGCTAAGTATCAGTGCTAAATGCTCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR TCA 90 bp AATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTACCATGACCAGTTACTaGTTTGATTTCCCTTGGCTA +
Preference number: 4 (lower is better)
Translates to: NMAMGHNCSAEKVSFHKATMTSY*FDFPWL
Trigger: TAGCCAAGGGAAATCAAATCAGTAACTGGTCATGGT...AGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR TCA 90 bp AATCAGTTAACTTCTATAGACAATCCTGGTGAGAAATCCAACCAGCTGATATCTCACTGCAGTTCAGCCTaGCTTACTGATTACTGGGGC +
Preference number: 4 (lower is better)
Translates to: NQLTSIDNPGEKSNQLISHCSSA*LTDYWG
Trigger: GCCCCAGTAATCAGTAAGTCAGGCTGAACTGCAGTG...AGATATCAGCTGGTTGGATTTCTCACCAGGATTGTCTATAGAAGTTAACTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR TCA 90 bp GAATTTCTTCTCAAAATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTACAACTGCTTCCTGCTTaGCCTGCAAATGCCAAGTTA +
Preference number: 4 (lower is better)
Translates to: EFLLKIWLWATIAQQRRLQLLPA*PANAKL
Trigger: TAACTTGGCATTTGCAGGTCAAGCAGGAAGCAGTTG...TAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATTTTGAGAAGAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR TCA 90 bp CCTCTTTCTGCCTTGGTTAATACCTGCATAGGATTCCACAGTCACAGACTGAATTATAGACAATCCTGGTaGGAAATCCAACCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: PLSALVNTCIGFHSHRLNYRQSW*EIQPAD
Trigger: ATCAGCTGGTTGGATTTCTCACCAGGATTGTCTATA...ATTCAGTCTGTGACTGTGGAATCCTATGCAGGTATTAACCAAGGCAGAAAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR GCA 90 bp ATCACCACTATTATGAAAAACAATTTAAAGGCCGTTCAGCTCAGATGTGTGCTCAGATTGCTTCTGTGCTaGAAAGGAACCGTTCCCGGT +
Preference number: 4 (lower is better)
Translates to: ITTIMKNNLKAVQLRCVLRLLLC*KGTVPG
Trigger: ACCGGGAACGGTTCCTTTGCAGCACAGAAGCAATCT...GAGCACACATCTGAGCTGAACGGCCTTTAAATTGTTTTTCATAATAGTGGTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR GCA 90 bp CTATTGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTAGATTGCTTCTGTGCTaGAAAGGAACCGTTCCCGGT +
Preference number: 4 (lower is better)
Translates to: LLQRLQNVAQILKTADSIRLLLC*KGTVPG
Trigger: ACCGGGAACGGTTCCTTTGCAGCACAGAAGCAATCT...AATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR GCA 90 bp AGTAGAATAAATGCTTCACAAATTGTGCAGGATGTCATACTAAGGCTGTGGTCTAGATTGCTTCTGTGCTaGAAAGGAACCGTTCCCGGT +
Preference number: 4 (lower is better)
Translates to: SRINASQIVQDVILRLWSRLLLC*KGTVPG
Trigger: ACCGGGAACGGTTCCTTTGCAGCACAGAAGCAATCT...AGACCACAGCCTTAGTATGACATCCTGCACAATTTGTGAAGCATTTATTCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR GCA 90 bp TTGGAATGCTCCCCAGAACTTACAAGGCGGTTTTTAAAGTGTGATATTCCAATAGAGAGATTGCTTCTGTaGTGCAAAGGAACCGTTCCC +
Preference number: 4 (lower is better)
Translates to: LECSPELTRRFLKCDIPIERLLL*CKGTVP
Trigger: GGGAACGGTTCCTTTGCAGCACAGAAGCAATCTCTC...TATTGGAATATCACACTTTAAAAACCGCCTTGTAAGTTCTGGGGAGCATTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR GCA 90 bp AATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTTTTGCCATCAGAATATaGGAAGATGGGGAGAGAGAT +
Preference number: 4 (lower is better)
Translates to: NMAMGHNCSAEKVSFHKAFAIRI*EDGERD
Trigger: ATCTCTCTCCCCATCTTCGCATATTCTGATGGCAAA...AGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR GCA 90 bp GCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATCAAAATGTTGTCAGCTaGATGGCTATAGTTCGCCAT +
Preference number: 4 (lower is better)
Translates to: AMGHNCSAEKVSFHKAKDQNVVS*MAIVRH
Trigger: ATGGCGAACTATAGCCATGCAGCTGACAACATTTTG...ATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR GCA 90 bp AATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAGAGGCGAGAGATTTTaGAAAATGTTGTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: NMAMGHNCSAEKVSFHKARGERF*KMLSAA
Trigger: TGCAGCTGACAACATTTTGCAAAATCTCTCGCCTCT...AGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR GCA 90 bp TGTTTGCAACTGTCCTACAGTAATCCCAGGTGCAACCCAACTCATTATGACACAAGAGGCGAGAGATTTTaGAAAATGTTGTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: CLQLSYSNPRCNPTHYDTRGERF*KMLSAA
Trigger: TGCAGCTGACAACATTTTGCAAAATCTCTCGCCTCT...TGTGTCATAATGAGTTGGGTTGCACCTGGGATTACTGTAGGACAGTTGCAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR GCA 90 bp ACCAAGGAGACTTTATTGCTAGATCCAACTCACTGTTGTGCATTAAATTTTGTCCCAGTTCTGGCTGACTaGTGCTACAAACTGGACTGG +
Preference number: 4 (lower is better)
Translates to: TKETLLLDPTHCCALNFVPVLAD*CYKLDW
Trigger: CCAGTCCAGTTTGTAGCAGCAGTCAGCCAGAACTGG...GACAAAATTTAATGCACAACAGTGAGTTGGATCTAGCAATAAAGTCTCCTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR GCA 90 bp TTTGACCACATAAAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAACCAGTTCTGGCTGACTaGTGCTACAAACTGGACTGG +
Preference number: 4 (lower is better)
Translates to: FDHIKKLRAVVQSLLNYKPVLAD*CYKLDW
Trigger: CCAGTCCAGTTTGTAGCAGCAGTCAGCCAGAACTGG...TTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTTTATGTGGTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR GCA 90 bp AGTAGAATAAATGCTTCACAAATTGTGCAGGATGTCATACTAAGGCTGTGGTCTGTGGTGTTTGCATTTTaGCTGATGCCCAGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: SRINASQIVQDVILRLWSVVFAF*LMPSKV
Trigger: CACCTTGCTGGGCATCAGGCAAAATGCAAACACCAC...AGACCACAGCCTTAGTATGACATCCTGCACAATTTGTGAAGCATTTATTCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR GCA 90 bp TGTGCCTTCAGTAGAATAAATGCTTCACAAATTGTGCAGGATGTCATACTAAGGTCTGCCTGTGGTGTTTaGATTTTGCCTGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: CAFSRINASQIVQDVILRSACGV*ILPDAQ
Trigger: CTGGGCATCAGGCAAAATGCAAACACCACAGGCAGA...CCTTAGTATGACATCCTGCACAATTTGTGAAGCATTTATTCTACTGAAGGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR GCA 90 bp GAATTTCTTCTCAAAATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGCTATGGGCCACAATTaGTCAGCAGAGAAGGTTAGT +
Preference number: 4 (lower is better)
Translates to: EFLLKIWLWATIAQQRRLAMGHN*SAEKVS
Trigger: ACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGC...TAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATTTTGAGAAGAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR GCA 90 bp TGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTCTTGGCTATGGGCCACAATTaGTCAGCAGAGAAGGTTAGT +
Preference number: 4 (lower is better)
Translates to: CKDCRMLPKSLKLLIPFLAMGHN*SAEKVS
Trigger: ACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGC...CAAGAATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR GCA 90 bp AATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTCCATGCACTTTTAGATaGATGACCATGACCAGTTAC +
Preference number: 4 (lower is better)
Translates to: NMAMGHNCSAEKVSFHKAPCTFR*MTMTSY
Trigger: GTAACTGGTCATGGTCATGCATCTAAAAGTGCATGG...AGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR GCA 90 bp GAATTTCTTCTCAAAATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTACTTTGTTTTCCACTATaGACTCAGCACCAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: EFLLKIWLWATIAQQRRLLCFPL*TQHQAQ
Trigger: CTGGGCTTGGTGCTGAGTGCATAGTGGAAAACAAAG...TAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATTTTGAGAAGAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297146.7
ENST00000610164.1
CDS-3UTR GCA 90 bp CTATTGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTGCTGGGTTTATTGACTaGCCTGTCCAATCCAACTGG +
Preference number: 4 (lower is better)
Translates to: LLQRLQNVAQILKTADSIAGFID*PVQSNW
Trigger: CCAGTTGGATTGGACAGGGCAGTCAATAAACCCAGC...AATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424100.2
CDS-3UTR CCA 90 bp CTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATTCAGAATATGCGAAGATaGGGAGAGAGATTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: LWATIAQQRRLVFTRLKIQNMRR*GERLLL
Trigger: CAGAAGCAATCTCTCTCCCCATCTTCGCATATTCTG...AATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CCA 90 bp AAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAACCTTTGCTGGCATTCGCCATAGATGGATaGAGGATAAGGATACAGCCT +
Preference number: 4 (lower is better)
Translates to: KKLRAVVQSLLNYKPLLAFAIDG*RIRIQP
Trigger: AGGCTGTATCCTTATCCTCCATCCATCTATGGCGAA...TGCCAGCAAAGGTTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CCA 90 bp CTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATTCTTTCACTAGCAAAATaGAGATCAGGAGGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: LWATIAQQRRLVFTRLKILSLAK*RSGGCP
Trigger: TGGGCAACCTCCTGATCTCCATTTTGCTAGTGAAAG...AATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CCA 90 bp AAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAACCTTTGCTGGCAGGATTGATTCCTGCTTaGGCAAAACTCATCCAGACA +
Preference number: 4 (lower is better)
Translates to: KKLRAVVQSLLNYKPLLAGLIPA*AKLIQT
Trigger: TGTCTGGATGAGTTTTGCCCAAGCAGGAATCAATCC...TGCCAGCAAAGGTTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CCA 90 bp CTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATTCTCAAAATATGGCTATaGGCCACAATTGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LWATIAQQRRLVFTRLKILKIWL*ATIAQQ
Trigger: CTGCTGAGCAATTGTGGCCCATAGCCATATTTTGAG...AATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CCA 90 bp AAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAACCTTTGCTGGCACTCAAAATATGGCTATaGGCCACAATTGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: KKLRAVVQSLLNYKPLLALKIWL*ATIAQQ
Trigger: CTGCTGAGCAATTGTGGCCCATAGCCATATTTTGAG...TGCCAGCAAAGGTTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CCA 90 bp AAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAACCTTTGCTGGCAATTACAAACCTTTGCTaGCAGTCAGCAGGATCACTC +
Preference number: 4 (lower is better)
Translates to: KKLRAVVQSLLNYKPLLAITNLC*QSAGSL
Trigger: GAGTGATCCTGCTGACTGCCAGCAAAGGTTTGTAAT...TGCCAGCAAAGGTTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CCA 90 bp TGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTCTTGGCTTTTGTCCCTTCGTaGCTGCTTCTGAACTTTTCC +
Preference number: 4 (lower is better)
Translates to: CKDCRMLPKSLKLLIPFLAFVPS*LLLNFS
Trigger: GGAAAAGTTCAGAAGCAGCCACGAAGGGACAAAAGC...CAAGAATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424100.2
CDS-3UTR TCA 90 bp GAATTTCTTCTCAAAATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTACAAAGAGAACTGATCTaGTCTGCAGTCATGCTTCCT +
Preference number: 4 (lower is better)
Translates to: EFLLKIWLWATIAQQRRLQRELI*SAVMLP
Trigger: AGGAAGCATGACTGCAGATCAGATCAGTTCTCTTTG...TAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATTTTGAGAAGAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR TCA 90 bp TGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTCTTGCGAAAAATATCAGCTTaGGGTAGACAAGCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: CKDCRMLPKSLKLLIPFLRKISA*GRQAVW
Trigger: CCACACAGCTTGTCTACCTCAAGCTGATATTTTTCG...CAAGAATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR TCA 90 bp TTTGACCACATAAAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAAAAGTCCAGTTCTGGCTaGCTGCTGCTACAAACTGGA +
Preference number: 4 (lower is better)
Translates to: FDHIKKLRAVVQSLLNYKKSSSG*LLLQTG
Trigger: TCCAGTTTGTAGCAGCAGTCAGCCAGAACTGGACTT...TTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTTTATGTGGTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR TCA 90 bp ATAGAATTAACTACATGGGAGCTGGTTCTAAAATACAACACGCTGATTCGTGTATCGTGTAAGTGTGGGTaGAAGGTTCCTGGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: IELTTWELVLKYNTLIRVSCKCG*KVPGAL
Trigger: CAAAGCACCAGGAACCTTTCACCCACACTTACACGA...TACACGAATCAGCGTGTTGTATTTTAGAACCAGCTCCCATGTAGTTAATTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR TCA 90 bp GAATTTCTTCTCAAAATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTATGGATAGTTGGGATATaGAGGGAACTTTGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: EFLLKIWLWATIAQQRRLWIVGI*RELWKG
Trigger: TCCCTTCCAAAGTTCCCTTCATATCCCAACTATCCA...TAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATTTTGAGAAGAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR TCA 90 bp GAATTTCTTCTCAAAATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTACCAAGGAGGCAGCTATaGATGTCAGGTGTGAATAAT +
Preference number: 4 (lower is better)
Translates to: EFLLKIWLWATIAQQRRLPRRQL*MSGVNN
Trigger: ATTATTCACACCTGACATTCATAGCTGCCTCCTTGG...TAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATTTTGAGAAGAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR GCA 90 bp CCTCTTTCTGCCTTGGTTAATACCTGCATAGGATTCCACAGTCACAGACTGAATAGAACTGATCTGATCTaGAGTCATGCTTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: PLSALVNTCIGFHSHRLNRTDLI*SHASSF
Trigger: AAAAGAGGAAGCATGACTGCAGATCAGATCAGTTCT...ATTCAGTCTGTGACTGTGGAATCCTATGCAGGTATTAACCAAGGCAGAAAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR GCA 90 bp CTGGTTCTAAAATACAACACGCTGATTCGTGTAAGTGTGGGTGAAAGGTTCCTGAGAACTGATCTGATCTaGAGTCATGCTTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: LVLKYNTLIRVSVGERFLRTDLI*SHASSF
Trigger: AAAAGAGGAAGCATGACTGCAGATCAGATCAGTTCT...CAGGAACCTTTCACCCACACTTACACGAATCAGCGTGTTGTATTTTAGAACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR GCA 90 bp ACAGAGCATTTAGCACTGATACTTAGCACCTGCTACTTTCATTATCTAGTTTTTCCAGTTCTGGCTGACTaGTGCTACAAACTGGACTGG +
Preference number: 4 (lower is better)
Translates to: TEHLALILSTCYFHYLVFPVLAD*CYKLDW
Trigger: CCAGTCCAGTTTGTAGCAGCAGTCAGCCAGAACTGG...AAAAACTAGATAATGAAAGTAGCAGGTGCTAAGTATCAGTGCTAAATGCTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR GCA 90 bp ATAGAATTAACTACATGGGAGCTGGTTCTAAAATACAACACGCTGATTCGTGTAGTGGTGTTTGCATTTTaGCTGATGCCCAGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: IELTTWELVLKYNTLIRVVVFAF*LMPSKV
Trigger: CACCTTGCTGGGCATCAGGCAAAATGCAAACACCAC...TACACGAATCAGCGTGTTGTATTTTAGAACCAGCTCCCATGTAGTTAATTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR GCA 90 bp AAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAACCTTTGCTGGCACCAATAGCCTTCTTCTaGCTGTGGTGTTTGCATTTT +
Preference number: 4 (lower is better)
Translates to: KKLRAVVQSLLNYKPLLAPIAFF*LWCLHF
Trigger: AAAATGCAAACACCACAGGCAGAAGAAGGCTATTGG...TGCCAGCAAAGGTTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR GCA 90 bp GCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATTACTACAGGCCCTCTTaGAAAAACTCTCCAATAACA +
Preference number: 4 (lower is better)
Translates to: AMGHNCSAEKVSFHKAKDYYRPS*KNSPIT
Trigger: TGTTATTGGAGAGTTTTTGCAAGAGGGCCTGTAGTA...ATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR GCA 90 bp CTGGTTCTAAAATACAACACGCTGATTCGTGTAAGTGTGGGTGAAAGGTTCCTGTACTACAGGCCCTCTTaGAAAAACTCTCCAATAACA +
Preference number: 4 (lower is better)
Translates to: LVLKYNTLIRVSVGERFLYYRPS*KNSPIT
Trigger: TGTTATTGGAGAGTTTTTGCAAGAGGGCCTGTAGTA...CAGGAACCTTTCACCCACACTTACACGAATCAGCGTGTTGTATTTTAGAACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR GCA 90 bp AATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAAGGATTGATTCCTaGTTGGGCAAAACTCATCCA +
Preference number: 4 (lower is better)
Translates to: NMAMGHNCSAEKVSFHKAKRIDS*LGKTHP
Trigger: TGGATGAGTTTTGCCCAAGCAGGAATCAATCCTTTT...AGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR GCA 90 bp TGTTTGCAACTGTCCTACAGTAATCCCAGGTGCAACCCAACTCATTATGACACATTAATTACAAACCTTTaGTGGCAGTCAGCAGGATCA +
Preference number: 4 (lower is better)
Translates to: CLQLSYSNPRCNPTHYDTLITNL*WQSAGS
Trigger: TGATCCTGCTGACTGCCAGCAAAGGTTTGTAATTAA...TGTGTCATAATGAGTTGGGTTGCACCTGGGATTACTGTAGGACAGTTGCAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR GCA 90 bp ATGAGGTCAGAATGCTCACTAATTCATGGCTTGAGCTGTCCTTATAAGAGCAAAGCCTTGGTTAATACCTaGATAGGATTCCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: MRSECSLIHGLSCPYKSKALVNT*IGFHSH
Trigger: GTGACTGTGGAATCCTATGCAGGTATTAACCAAGGC...TTTGCTCTTATAAGGACAGCTCAAGCCATGAATTAGTGAGCATTCTGACCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CCA 90 bp CTATTGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTAGCATGAAAGCAGTGTaGAAACAGGACAAAACCCCC +
Preference number: 4 (lower is better)
Translates to: LLQRLQNVAQILKTADSISMKAV*KQDKTP
Trigger: GGGGGTTTTGTCCTGTTTCCACACTGCTTTCATGCT...AATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCAATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CCA 90 bp AGTAGAATAAATGCTTCACAAATTGTGCAGGATGTCATACTAAGGCTGTGGTCTAGCATGAAAGCAGTGTaGAAACAGGACAAAACCCCC +
Preference number: 4 (lower is better)
Translates to: SRINASQIVQDVILRLWSSMKAV*KQDKTP
Trigger: GGGGGTTTTGTCCTGTTTCCACACTGCTTTCATGCT...AGACCACAGCCTTAGTATGACATCCTGCACAATTTGTGAAGCATTTATTCTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR CCA 90 bp GCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATTGCTACAAACTGGACTaGCTTCATTTTTCTTCGATC +
Preference number: 4 (lower is better)
Translates to: AMGHNCSAEKVSFHKAKDCYKLD*LHFSSI
Trigger: GATCGAAGAAAAATGAAGCCAGTCCAGTTTGTAGCA...ATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CCA 90 bp TGTTTGCAACTGTCCTACAGTAATCCCAGGTGCAACCCAACTCATTATGACACAACTGCTGCTACAAACTaGACTGGCTTCATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: CLQLSYSNPRCNPTHYDTTAATN*TGFIFL
Trigger: AAGAAAAATGAAGCCAGTCCAGTTTGTAGCAGCAGT...TGTGTCATAATGAGTTGGGTTGCACCTGGGATTACTGTAGGACAGTTGCAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR CCA 90 bp CCTCTTTCTGCCTTGGTTAATACCTGCATAGGATTCCACAGTCACAGACTGAATGTTCCCTTGGTAACCTaGATTTTCTGCAGTAAAGAA +
Preference number: 4 (lower is better)
Translates to: PLSALVNTCIGFHSHRLNVPLVT*IFCSKE
Trigger: TTCTTTACTGCAGAAAATCCAGGTTACCAAGGGAAC...ATTCAGTCTGTGACTGTGGAATCCTATGCAGGTATTAACCAAGGCAGAAAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CCA 90 bp TGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTCTTGATTACAAACCTTTGCTaGCAGTCAGCAGGATCACTC +
Preference number: 4 (lower is better)
Translates to: CKDCRMLPKSLKLLIPFLITNLC*QSAGSL
Trigger: GAGTGATCCTGCTGACTGCCAGCAAAGGTTTGTAAT...CAAGAATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CCA 90 bp GCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATAGAAACTTAGGGCAGTaGTTCAGTCCCTTCTTAATT +
Preference number: 4 (lower is better)
Translates to: AMGHNCSAEKVSFHKAKDRNLGQ*FSPFLI
Trigger: AATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCT...ATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CCA 90 bp CTATTGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTTTCCAAATAGCTAGGTaGAGTCAGGCAGCTTCACGT +
Preference number: 4 (lower is better)
Translates to: LLQRLQNVAQILKTADSIFQIAR*SQAASR
Trigger: ACGTGAAGCTGCCTGACTCCACCTAGCTATTTGGAA...AATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CCA 90 bp AGTAGAATAAATGCTTCACAAATTGTGCAGGATGTCATACTAAGGCTGTGGTCTCCTGCCCCGCTACAGTaGGGATGTATTTTTATGGAT +
Preference number: 4 (lower is better)
Translates to: SRINASQIVQDVILRLWSPAPLQ*GCIFMD
Trigger: ATCCATAAAAATACATCCCCACTGTAGCGGGGCAGG...AGACCACAGCCTTAGTATGACATCCTGCACAATTTGTGAAGCATTTATTCTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CCA 90 bp TGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTCTTGGTCTCTGTGGAGAAATaGGCAAGTTACTCACCTCTT +
Preference number: 4 (lower is better)
Translates to: CKDCRMLPKSLKLLIPFLVSVEK*ASYSPL
Trigger: AAGAGGTGAGTAACTTGCCCATTTCTCCACAGAGAC...CAAGAATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CCA 90 bp CTATTGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTAGTAAGCCCTACTGTTaGTGTTGGATATCCCGACAG +
Preference number: 4 (lower is better)
Translates to: LLQRLQNVAQILKTADSISKPYC*CWISRQ
Trigger: CTGTCGGGATATCCAACACCAACAGTAGGGCTTACT...AATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424100.2
CDS-3UTR TCA 90 bp TTGGAATGCTCCCCAGAACTTACAAGGCGGTTTTTAAAGTGTGATATTCCAATACAAAGAGAACTGATCTaGTCTGCAGTCATGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LECSPELTRRFLKCDIPIQRELI*SAVMLP
Trigger: AGGAAGCATGACTGCAGATCAGATCAGTTCTCTTTG...TATTGGAATATCACACTTTAAAAACCGCCTTGTAAGTTCTGGGGAGCATTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR TCA 90 bp TGTGCCTTCAGTAGAATAAATGCTTCACAAATTGTGCAGGATGTCATACTAAGGATCCACAAAGAGAACTaGTCTGATCTGCAGTCATGC +
Preference number: 4 (lower is better)
Translates to: CAFSRINASQIVQDVILRIHKEN*SDLQSC
Trigger: GCATGACTGCAGATCAGATCAGTTCTCTTTGTGGAT...CCTTAGTATGACATCCTGCACAATTTGTGAAGCATTTATTCTACTGAAGGCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR TCA 90 bp CTATTGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTATCCACAAAGAGAACTaGTCTGATCTGCAGTCATGC +
Preference number: 4 (lower is better)
Translates to: LLQRLQNVAQILKTADSIIHKEN*SDLQSC
Trigger: GCATGACTGCAGATCAGATCAGTTCTCTTTGTGGAT...AATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR TCA 90 bp CTGGTTCTAAAATACAACACGCTGATTCGTGTAAGTGTGGGTGAAAGGTTCCTGCTCAGTCAAGTCTCATaGTCTAGATATAAGAACAAG +
Preference number: 4 (lower is better)
Translates to: LVLKYNTLIRVSVGERFLLSQVS*SRYKNK
Trigger: CTTGTTCTTATATCTAGATCATGAGACTTGACTGAG...CAGGAACCTTTCACCCACACTTACACGAATCAGCGTGTTGTATTTTAGAACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR TCA 90 bp GAATTTCTTCTCAAAATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTATGTTGGAAGGTGCATTaGTCTTCCTCCCTAATGAAT +
Preference number: 4 (lower is better)
Translates to: EFLLKIWLWATIAQQRRLCWKVH*SSSLMN
Trigger: ATTCATTAGGGAGGAAGATCAATGCACCTTCCAACA...TAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATTTTGAGAAGAAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR TCA 90 bp ACAGAGCATTTAGCACTGATACTTAGCACCTGCTACTTTCATTATCTAGTTTTTAAGTCCAGTTCTGGCTaGCTGCTGCTACAAACTGGA +
Preference number: 4 (lower is better)
Translates to: TEHLALILSTCYFHYLVFKSSSG*LLLQTG
Trigger: TCCAGTTTGTAGCAGCAGTCAGCCAGAACTGGACTT...AAAAACTAGATAATGAAAGTAGCAGGTGCTAAGTATCAGTGCTAAATGCTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR TCA 90 bp TGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTCTTGACCATGACCAGTTACTaGTTTGATTTCCCTTGGCTA +
Preference number: 4 (lower is better)
Translates to: CKDCRMLPKSLKLLIPFLTMTSY*FDFPWL
Trigger: TAGCCAAGGGAAATCAAATCAGTAACTGGTCATGGT...CAAGAATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR TCA 90 bp GCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATCTGTATCTTAAAGAATaGGACTCACAGACTCTAATG +
Preference number: 4 (lower is better)
Translates to: AMGHNCSAEKVSFHKAKDLYLKE*DSQTLM
Trigger: CATTAGAGTCTGTGAGTCTCATTCTTTAAGATACAG...ATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR TCA 90 bp ACCAAGGAGACTTTATTGCTAGATCCAACTCACTGTTGTGCATTAAATTTTGTCTTCAGCCTGACTTACTaGTTACTGGGGCTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: TKETLLLDPTHCCALNFVFSLTY*LLGLVS
Trigger: AGAAACCAGCCCCAGTAATCAGTAAGTCAGGCTGAA...GACAAAATTTAATGCACAACAGTGAGTTGGATCTAGCAATAAAGTCTCCTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR TCA 90 bp AATCAGTTAACTTCTATAGACAATCCTGGTGAGAAATCCAACCAGCTGATATCTAGCATCCATGGAAGTTaGGGCAAATGGATAAGTGGC +
Preference number: 4 (lower is better)
Translates to: NQLTSIDNPGEKSNQLISSIHGS*GKWISG
Trigger: GCCACTTATCCATTTGCCTCAACTTCCATGGATGCT...AGATATCAGCTGGTTGGATTTCTCACCAGGATTGTCTATAGAAGTTAACTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR GCA 90 bp ACAGAGCATTTAGCACTGATACTTAGCACCTGCTACTTTCATTATCTAGTTTTTGAGAGATTGCTTCTGTaGTGCAAAGGAACCGTTCCC +
Preference number: 4 (lower is better)
Translates to: TEHLALILSTCYFHYLVFERLLL*CKGTVP
Trigger: GGGAACGGTTCCTTTGCAGCACAGAAGCAATCTCTC...AAAAACTAGATAATGAAAGTAGCAGGTGCTAAGTATCAGTGCTAAATGCTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR GCA 90 bp TGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTCTTGAGAGGCGAGAGATTTTaGAAAATGTTGTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: CKDCRMLPKSLKLLIPFLRGERF*KMLSAA
Trigger: TGCAGCTGACAACATTTTGCAAAATCTCTCGCCTCT...CAAGAATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR GCA 90 bp GAATTTCTTCTCAAAATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTACAGGAAGTAGTAAGGTaGTCTATGCAAGGTCTTATC +
Preference number: 4 (lower is better)
Translates to: EFLLKIWLWATIAQQRRLQEVVR*SMQGLI
Trigger: GATAAGACCTTGCATAGAGCACCTTACTACTTCCTG...TAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATTTTGAGAAGAAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR GCA 90 bp TGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTCTTGCAGGAAGTAGTAAGGTaGTCTATGCAAGGTCTTATC +
Preference number: 4 (lower is better)
Translates to: CKDCRMLPKSLKLLIPFLQEVVR*SMQGLI
Trigger: GATAAGACCTTGCATAGAGCACCTTACTACTTCCTG...CAAGAATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR GCA 90 bp TGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTCTTGGAAAGGCAATCACTTTaGAAGTCAGAGTCCCATAAG +
Preference number: 4 (lower is better)
Translates to: CKDCRMLPKSLKLLIPFLERQSL*KSESHK
Trigger: CTTATGGGACTCTGACTTGCAAAGTGATTGCCTTTC...CAAGAATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR GCA 90 bp AAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAACCTTTGCTGGCAAAAAGGATTGATTCCTaGTTGGGCAAAACTCATCCA +
Preference number: 4 (lower is better)
Translates to: KKLRAVVQSLLNYKPLLAKRIDS*LGKTHP
Trigger: TGGATGAGTTTTGCCCAAGCAGGAATCAATCCTTTT...TGCCAGCAAAGGTTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR GCA 90 bp GAATTTCTTCTCAAAATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTAACCTGGATTTTCTaGAGTAAAGAAGGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: EFLLKIWLWATIAQQRRLVTWIF*SKEGLC
Trigger: GCACAACCCTTCTTTACTGCAGAAAATCCAGGTTAC...TAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATTTTGAGAAGAAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR GCA 90 bp AATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTCATACATCAACTGCCTaGTTCTTAGAACAGTTTAGA +
Preference number: 4 (lower is better)
Translates to: NMAMGHNCSAEKVSFHKAHTSTA*FLEQFR
Trigger: TCTAAACTGTTCTAAGAAGCAGGCAGTTGATGTATG...AGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR GCA 90 bp CAAAACCATAATAAAGCTAGTCTTCCTAGTTTGTGCTTGCCTCCCAAATTAAAATTCAGCTCAGATGTGTaGTCAGTCCAAGAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: QNHNKASLPSLCLPPKLKFSSDV*SVQEGD
Trigger: GTCTCCCTCTTGGACTGAGCACACATCTGAGCTGAA...TTTTAATTTGGGAGGCAAGCACAAACTAGGAAGACTAGCTTTATTATGGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR GCA 90 bp GCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATAATGAGAGACTGTTCTaGTTTGTTTTCCACTATGCA +
Preference number: 4 (lower is better)
Translates to: AMGHNCSAEKVSFHKAKDNERLF*FVFHYA
Trigger: TGCATAGTGGAAAACAAAGCAGAACAGTCTCTCATT...ATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297146.7
ENST00000610164.1
CDS-3UTR GCA 90 bp GAATTTCTTCTCAAAATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAAAAGGAATTGCTTTCTaGCTCCAAGCTGAACTTGGA +
Preference number: 4 (lower is better)
Translates to: EFLLKIWLWATIAQQRRLKGIAF*LQAELG
Trigger: TCCAAGTTCAGCTTGGAGGCAGAAAGCAATTCCTTT...TAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATTTTGAGAAGAAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR CCA 90 bp AGTAGAATAAATGCTTCACAAATTGTGCAGGATGTCATACTAAGGCTGTGGTCTCAGAATATGCGAAGATaGGGAGAGAGATTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SRINASQIVQDVILRLWSQNMRR*GERLLL
Trigger: CAGAAGCAATCTCTCTCCCCATCTTCGCATATTCTG...AGACCACAGCCTTAGTATGACATCCTGCACAATTTGTGAAGCATTTATTCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR CCA 90 bp TTGGAATGCTCCCCAGAACTTACAAGGCGGTTTTTAAAGTGTGATATTCCAATACAGAATATGCGAAGATaGGGAGAGAGATTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: LECSPELTRRFLKCDIPIQNMRR*GERLLL
Trigger: CAGAAGCAATCTCTCTCCCCATCTTCGCATATTCTG...TATTGGAATATCACACTTTAAAAACCGCCTTGTAAGTTCTGGGGAGCATTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR CCA 90 bp TTTACCCACGCATTTTCATCCTATCTTGCAGGAACATGTGAGTATGTCAGAAAACTTTCACTAGCAAAATaGAGATCAGGAGGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: FTHAFSSYLAGTCEYVRKLSLAK*RSGGCP
Trigger: TGGGCAACCTCCTGATCTCCATTTTGCTAGTGAAAG...TTTTCTGACATACTCACATGTTCCTGCAAGATAGGATGAAAATGCGTGGGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR CCA 90 bp CTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATTACTGCTGCTACAAACTaGACTGGCTTCATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: LWATIAQQRRLVFTRLKITAATN*TGFIFL
Trigger: AAGAAAAATGAAGCCAGTCCAGTTTGTAGCAGCAGT...AATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CCA 90 bp ATCACCACTATTATGAAAAACAATTTAAAGGCCGTTCAGCTCAGATGTGTGCTCGGATTGATTCCTGCTTaGGCAAAACTCATCCAGACA +
Preference number: 4 (lower is better)
Translates to: ITTIMKNNLKAVQLRCVLGLIPA*AKLIQT
Trigger: TGTCTGGATGAGTTTTGCCCAAGCAGGAATCAATCC...GAGCACACATCTGAGCTGAACGGCCTTTAAATTGTTTTTCATAATAGTGGTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CCA 90 bp AAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAACCTTTGCTGGCAGTTCCCTTGGTAACCTaGATTTTCTGCAGTAAAGAA +
Preference number: 4 (lower is better)
Translates to: KKLRAVVQSLLNYKPLLAVPLVT*IFCSKE
Trigger: TTCTTTACTGCAGAAAATCCAGGTTACCAAGGGAAC...TGCCAGCAAAGGTTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CCA 90 bp CTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATTGTTCCCTTGGTAACCTaGATTTTCTGCAGTAAAGAA +
Preference number: 4 (lower is better)
Translates to: LWATIAQQRRLVFTRLKIVPLVT*IFCSKE
Trigger: TTCTTTACTGCAGAAAATCCAGGTTACCAAGGGAAC...AATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CCA 90 bp ATCACCACTATTATGAAAAACAATTTAAAGGCCGTTCAGCTCAGATGTGTGCTCCTCAAAATATGGCTATaGGCCACAATTGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: ITTIMKNNLKAVQLRCVLLKIWL*ATIAQQ
Trigger: CTGCTGAGCAATTGTGGCCCATAGCCATATTTTGAG...GAGCACACATCTGAGCTGAACGGCCTTTAAATTGTTTTTCATAATAGTGGTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CCA 90 bp CTATTGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTATTACAAACCTTTGCTaGCAGTCAGCAGGATCACTC +
Preference number: 4 (lower is better)
Translates to: LLQRLQNVAQILKTADSIITNLC*QSAGSL
Trigger: GAGTGATCCTGCTGACTGCCAGCAAAGGTTTGTAAT...AATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CCA 90 bp GAATTTCTTCTCAAAATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAACTGATTACTGGGGCTaGTTTCTTACCAAAACTGTG +
Preference number: 4 (lower is better)
Translates to: EFLLKIWLWATIAQQRRLTDYWG*FLTKTV
Trigger: CACAGTTTTGGTAAGAAACCAGCCCCAGTAATCAGT...TAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATTTTGAGAAGAAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR TCA 90 bp ATAGAATTAACTACATGGGAGCTGGTTCTAAAATACAACACGCTGATTCGTGTACAAAGAGAACTGATCTaGTCTGCAGTCATGCTTCCT +
Preference number: 4 (lower is better)
Translates to: IELTTWELVLKYNTLIRVQRELI*SAVMLP
Trigger: AGGAAGCATGACTGCAGATCAGATCAGTTCTCTTTG...TACACGAATCAGCGTGTTGTATTTTAGAACCAGCTCCCATGTAGTTAATTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR TCA 90 bp TTGGAATGCTCCCCAGAACTTACAAGGCGGTTTTTAAAGTGTGATATTCCAATATGTTGGAAGGTGCATTaGTCTTCCTCCCTAATGAAT +
Preference number: 4 (lower is better)
Translates to: LECSPELTRRFLKCDIPICWKVH*SSSLMN
Trigger: ATTCATTAGGGAGGAAGATCAATGCACCTTCCAACA...TATTGGAATATCACACTTTAAAAACCGCCTTGTAAGTTCTGGGGAGCATTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR TCA 90 bp TTTGACCACATAAAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAACGAAAAATATCAGCTTaGGGTAGACAAGCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: FDHIKKLRAVVQSLLNYKRKISA*GRQAVW
Trigger: CCACACAGCTTGTCTACCTCAAGCTGATATTTTTCG...TTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTTTATGTGGTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR TCA 90 bp ACAGAGCATTTAGCACTGATACTTAGCACCTGCTACTTTCATTATCTAGTTTTTTTGTCTATGCAATGGTaGACCTGTTCTCTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: TEHLALILSTCYFHYLVFLSMQW*TCSLWP
Trigger: AGGCCAGAGAGAACAGGTTCACCATTGCATAGACAA...AAAAACTAGATAATGAAAGTAGCAGGTGCTAAGTATCAGTGCTAAATGCTCTGT
40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR GCA 90 bp TGTGCCTTCAGTAGAATAAATGCTTCACAAATTGTGCAGGATGTCATACTAAGGTTTGCCATCAGAATATaGGAAGATGGGGAGAGAGAT +
Preference number: 4 (lower is better)
Translates to: CAFSRINASQIVQDVILRFAIRI*EDGERD
Trigger: ATCTCTCTCCCCATCTTCGCATATTCTGATGGCAAA...CCTTAGTATGACATCCTGCACAATTTGTGAAGCATTTATTCTACTGAAGGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR GCA 90 bp TGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTCTTGAGAACTGATCTGATCTaGAGTCATGCTTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: CKDCRMLPKSLKLLIPFLRTDLI*SHASSF
Trigger: AAAAGAGGAAGCATGACTGCAGATCAGATCAGTTCT...CAAGAATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR GCA 90 bp AGTAGAATAAATGCTTCACAAATTGTGCAGGATGTCATACTAAGGCTGTGGTCTAGAGGCGAGAGATTTTaGAAAATGTTGTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SRINASQIVQDVILRLWSRGERF*KMLSAA
Trigger: TGCAGCTGACAACATTTTGCAAAATCTCTCGCCTCT...AGACCACAGCCTTAGTATGACATCCTGCACAATTTGTGAAGCATTTATTCTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR GCA 90 bp TGTGCCTTCAGTAGAATAAATGCTTCACAAATTGTGCAGGATGTCATACTAAGGCAGGAAGTAGTAAGGTaGTCTATGCAAGGTCTTATC +
Preference number: 4 (lower is better)
Translates to: CAFSRINASQIVQDVILRQEVVR*SMQGLI
Trigger: GATAAGACCTTGCATAGAGCACCTTACTACTTCCTG...CCTTAGTATGACATCCTGCACAATTTGTGAAGCATTTATTCTACTGAAGGCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR GCA 90 bp TGTGCCTTCAGTAGAATAAATGCTTCACAAATTGTGCAGGATGTCATACTAAGGGAAAGGCAATCACTTTaGAAGTCAGAGTCCCATAAG +
Preference number: 4 (lower is better)
Translates to: CAFSRINASQIVQDVILRERQSL*KSESHK
Trigger: CTTATGGGACTCTGACTTGCAAAGTGATTGCCTTTC...CCTTAGTATGACATCCTGCACAATTTGTGAAGCATTTATTCTACTGAAGGCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR GCA 90 bp TTGGAATGCTCCCCAGAACTTACAAGGCGGTTTTTAAAGTGTGATATTCCAATACCAATAGCCTTCTTCTaGCTGTGGTGTTTGCATTTT +
Preference number: 4 (lower is better)
Translates to: LECSPELTRRFLKCDIPIPIAFF*LWCLHF
Trigger: AAAATGCAAACACCACAGGCAGAAGAAGGCTATTGG...TATTGGAATATCACACTTTAAAAACCGCCTTGTAAGTTCTGGGGAGCATTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR GCA 90 bp ATGAGGTCAGAATGCTCACTAATTCATGGCTTGAGCTGTCCTTATAAGAGCAAATACTACAGGCCCTCTTaGAAAAACTCTCCAATAACA +
Preference number: 4 (lower is better)
Translates to: MRSECSLIHGLSCPYKSKYYRPS*KNSPIT
Trigger: TGTTATTGGAGAGTTTTTGCAAGAGGGCCTGTAGTA...TTTGCTCTTATAAGGACAGCTCAAGCCATGAATTAGTGAGCATTCTGACCTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR GCA 90 bp TGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTCTTGTACTACAGGCCCTCTTaGAAAAACTCTCCAATAACA +
Preference number: 4 (lower is better)
Translates to: CKDCRMLPKSLKLLIPFLYYRPS*KNSPIT
Trigger: TGTTATTGGAGAGTTTTTGCAAGAGGGCCTGTAGTA...CAAGAATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR GCA 90 bp TGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTCTTGAAAAGGATTGATTCCTaGTTGGGCAAAACTCATCCA +
Preference number: 4 (lower is better)
Translates to: CKDCRMLPKSLKLLIPFLKRIDS*LGKTHP
Trigger: TGGATGAGTTTTGCCCAAGCAGGAATCAATCCTTTT...CAAGAATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR GCA 90 bp AGTAGAATAAATGCTTCACAAATTGTGCAGGATGTCATACTAAGGCTGTGGTCTGTAACCTGGATTTTCTaGAGTAAAGAAGGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: SRINASQIVQDVILRLWSVTWIF*SKEGLC
Trigger: GCACAACCCTTCTTTACTGCAGAAAATCCAGGTTAC...AGACCACAGCCTTAGTATGACATCCTGCACAATTTGTGAAGCATTTATTCTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR GCA 90 bp ACAGAGCATTTAGCACTGATACTTAGCACCTGCTACTTTCATTATCTAGTTTTTGCTATGGGCCACAATTaGTCAGCAGAGAAGGTTAGT +
Preference number: 4 (lower is better)
Translates to: TEHLALILSTCYFHYLVFAMGHN*SAEKVS
Trigger: ACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGC...AAAAACTAGATAATGAAAGTAGCAGGTGCTAAGTATCAGTGCTAAATGCTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR GCA 90 bp TGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTCTTGTTAATTACAAACCTTTaGTGGCAGTCAGCAGGATCA +
Preference number: 4 (lower is better)
Translates to: CKDCRMLPKSLKLLIPFLLITNL*WQSAGS
Trigger: TGATCCTGCTGACTGCCAGCAAAGGTTTGTAATTAA...CAAGAATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR GCA 90 bp AATCAGTTAACTTCTATAGACAATCCTGGTGAGAAATCCAACCAGCTGATATCTTTGTCAACTGCTTCCTaGTTGACCTGCAAATGCCAA +
Preference number: 4 (lower is better)
Translates to: NQLTSIDNPGEKSNQLISLSTAS*LTCKCQ
Trigger: TTGGCATTTGCAGGTCAAGCAGGAAGCAGTTGACAA...AGATATCAGCTGGTTGGATTTCTCACCAGGATTGTCTATAGAAGTTAACTGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR GCA 90 bp ACAGAGCATTTAGCACTGATACTTAGCACCTGCTACTTTCATTATCTAGTTTTTCTTTGTTTTCCACTATaGACTCAGCACCAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: TEHLALILSTCYFHYLVFLCFPL*TQHQAQ
Trigger: CTGGGCTTGGTGCTGAGTGCATAGTGGAAAACAAAG...AAAAACTAGATAATGAAAGTAGCAGGTGCTAAGTATCAGTGCTAAATGCTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297146.7
ENST00000610164.1
CDS-3UTR CCA 90 bp TTTGACCACATAAAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAACAGAATATGCGAAGATaGGGAGAGAGATTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: FDHIKKLRAVVQSLLNYKQNMRR*GERLLL
Trigger: CAGAAGCAATCTCTCTCCCCATCTTCGCATATTCTG...TTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTTTATGTGGTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CCA 90 bp TTCAGTACCAAGGAGACTTTATTGCTAGATCCAACTCACTGTTGTGCATTAAATCTTTCACTAGCAAAATaGAGATCAGGAGGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: FSTKETLLLDPTHCCALNLSLAK*RSGGCP
Trigger: TGGGCAACCTCCTGATCTCCATTTTGCTAGTGAAAG...ATTTAATGCACAACAGTGAGTTGGATCTAGCAATAAAGTCTCCTTGGTACTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CCA 90 bp TGTTTGCAACTGTCCTACAGTAATCCCAGGTGCAACCCAACTCATTATGACACAATTTTTCTTCGATCGTaGACGAAAAATATCAGCTTG +
Preference number: 4 (lower is better)
Translates to: CLQLSYSNPRCNPTHYDTIFLRS*TKNISL
Trigger: CAAGCTGATATTTTTCGTCCACGATCGAAGAAAAAT...TGTGTCATAATGAGTTGGGTTGCACCTGGGATTACTGTAGGACAGTTGCAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR CCA 90 bp GAATTTCTTCTCAAAATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAACTGCTGCTACAAACTaGACTGGCTTCATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: EFLLKIWLWATIAQQRRLTAATN*TGFIFL
Trigger: AAGAAAAATGAAGCCAGTCCAGTTTGTAGCAGCAGT...TAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATTTTGAGAAGAAATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CCA 90 bp ACCAAGTTTTCAGCTGATAGGCGATTAGGGAGTTTTATTGTATTCCAATTAAGGGGATTGATTCCTGCTTaGGCAAAACTCATCCAGACA +
Preference number: 4 (lower is better)
Translates to: TKFSADRRLGSFIVFQLRGLIPA*AKLIQT
Trigger: TGTCTGGATGAGTTTTGCCCAAGCAGGAATCAATCC...CCTTAATTGGAATACAATAAAACTCCCTAATCGCCTATCAGCTGAAAACTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR CCA 90 bp AATCAGTTAACTTCTATAGACAATCCTGGTGAGAAATCCAACCAGCTGATATCTATTACAAACCTTTGCTaGCAGTCAGCAGGATCACTC +
Preference number: 4 (lower is better)
Translates to: NQLTSIDNPGEKSNQLISITNLC*QSAGSL
Trigger: GAGTGATCCTGCTGACTGCCAGCAAAGGTTTGTAAT...AGATATCAGCTGGTTGGATTTCTCACCAGGATTGTCTATAGAAGTTAACTGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR TCA 90 bp ACAGAGCATTTAGCACTGATACTTAGCACCTGCTACTTTCATTATCTAGTTTTTATCCACAAAGAGAACTaGTCTGATCTGCAGTCATGC +
Preference number: 4 (lower is better)
Translates to: TEHLALILSTCYFHYLVFIHKEN*SDLQSC
Trigger: GCATGACTGCAGATCAGATCAGTTCTCTTTGTGGAT...AAAAACTAGATAATGAAAGTAGCAGGTGCTAAGTATCAGTGCTAAATGCTCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR TCA 90 bp AATCAGTTAACTTCTATAGACAATCCTGGTGAGAAATCCAACCAGCTGATATCTTGTTGGAAGGTGCATTaGTCTTCCTCCCTAATGAAT +
Preference number: 4 (lower is better)
Translates to: NQLTSIDNPGEKSNQLISCWKVH*SSSLMN
Trigger: ATTCATTAGGGAGGAAGATCAATGCACCTTCCAACA...AGATATCAGCTGGTTGGATTTCTCACCAGGATTGTCTATAGAAGTTAACTGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR TCA 90 bp GAATTTCTTCTCAAAATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTACTGTATCTTAAAGAATaGGACTCACAGACTCTAATG +
Preference number: 4 (lower is better)
Translates to: EFLLKIWLWATIAQQRRLLYLKE*DSQTLM
Trigger: CATTAGAGTCTGTGAGTCTCATTCTTTAAGATACAG...TAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATTTTGAGAAGAAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR TCA 90 bp TGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTCTTGCTGTATCTTAAAGAATaGGACTCACAGACTCTAATG +
Preference number: 4 (lower is better)
Translates to: CKDCRMLPKSLKLLIPFLLYLKE*DSQTLM
Trigger: CATTAGAGTCTGTGAGTCTCATTCTTTAAGATACAG...CAAGAATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR TCA 90 bp ACCAAGGAGACTTTATTGCTAGATCCAACTCACTGTTGTGCATTAAATTTTGTCATGGCATTGATTCACTaGGGATGTGTCTTGTCAACT +
Preference number: 4 (lower is better)
Translates to: TKETLLLDPTHCCALNFVMALIH*GCVLST
Trigger: AGTTGACAAGACACATCCTCAGTGAATCAATGCCAT...GACAAAATTTAATGCACAACAGTGAGTTGGATCTAGCAATAAAGTCTCCTTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR TCA 90 bp ACCAAGTTTTCAGCTGATAGGCGATTAGGGAGTTTTATTGTATTCCAATTAAGGTCTTGCAGGAACATGTaGGTATGTCAGAAAAGACAC +
Preference number: 4 (lower is better)
Translates to: TKFSADRRLGSFIVFQLRSCRNM*VCQKRH
Trigger: GTGTCTTTTCTGACATACTCACATGTTCCTGCAAGA...CCTTAATTGGAATACAATAAAACTCCCTAATCGCCTATCAGCTGAAAACTTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR GCA 90 bp ACCAAGGAGACTTTATTGCTAGATCCAACTCACTGTTGTGCATTAAATTTTGTCTTTGCCATCAGAATATaGGAAGATGGGGAGAGAGAT +
Preference number: 4 (lower is better)
Translates to: TKETLLLDPTHCCALNFVFAIRI*EDGERD
Trigger: ATCTCTCTCCCCATCTTCGCATATTCTGATGGCAAA...GACAAAATTTAATGCACAACAGTGAGTTGGATCTAGCAATAAAGTCTCCTTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR GCA 90 bp TTGGAATGCTCCCCAGAACTTACAAGGCGGTTTTTAAAGTGTGATATTCCAATAAGAACTGATCTGATCTaGAGTCATGCTTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: LECSPELTRRFLKCDIPIRTDLI*SHASSF
Trigger: AAAAGAGGAAGCATGACTGCAGATCAGATCAGTTCT...TATTGGAATATCACACTTTAAAAACCGCCTTGTAAGTTCTGGGGAGCATTCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR GCA 90 bp TTTGACCACATAAAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAACAAAATGTTGTCAGCTaGATGGCTATAGTTCGCCAT +
Preference number: 4 (lower is better)
Translates to: FDHIKKLRAVVQSLLNYKQNVVS*MAIVRH
Trigger: ATGGCGAACTATAGCCATGCAGCTGACAACATTTTG...TTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTTTATGTGGTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR GCA 90 bp TTTGACCACATAAAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAAGAAAGGCAATCACTTTaGAAGTCAGAGTCCCATAAG +
Preference number: 4 (lower is better)
Translates to: FDHIKKLRAVVQSLLNYKERQSL*KSESHK
Trigger: CTTATGGGACTCTGACTTGCAAAGTGATTGCCTTTC...TTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTTTATGTGGTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR GCA 90 bp TTCAGTACCAAGGAGACTTTATTGCTAGATCCAACTCACTGTTGTGCATTAAATCCAATAGCCTTCTTCTaGCTGTGGTGTTTGCATTTT +
Preference number: 4 (lower is better)
Translates to: FSTKETLLLDPTHCCALNPIAFF*LWCLHF
Trigger: AAAATGCAAACACCACAGGCAGAAGAAGGCTATTGG...ATTTAATGCACAACAGTGAGTTGGATCTAGCAATAAAGTCTCCTTGGTACTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR GCA 90 bp TTGGAATGCTCCCCAGAACTTACAAGGCGGTTTTTAAAGTGTGATATTCCAATATTAATTACAAACCTTTaGTGGCAGTCAGCAGGATCA +
Preference number: 4 (lower is better)
Translates to: LECSPELTRRFLKCDIPILITNL*WQSAGS
Trigger: TGATCCTGCTGACTGCCAGCAAAGGTTTGTAATTAA...TATTGGAATATCACACTTTAAAAACCGCCTTGTAAGTTCTGGGGAGCATTCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR GCA 90 bp AAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAACCTTTGCTGGCAATAAATGATCTTCCATaGACTTTTAGATGCATGACC +
Preference number: 4 (lower is better)
Translates to: KKLRAVVQSLLNYKPLLAINDLP*TFRCMT
Trigger: GGTCATGCATCTAAAAGTGCATGGAAGATCATTTAT...TGCCAGCAAAGGTTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR GCA 90 bp GAATTTCTTCTCAAAATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAAAAATGAGGTCAGAATaGTCACTAATTCATGGCTTG +
Preference number: 4 (lower is better)
Translates to: EFLLKIWLWATIAQQRRLKMRSE*SLIHGL
Trigger: CAAGCCATGAATTAGTGAGCATTCTGACCTCATTTT...TAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATTTTGAGAAGAAATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR GCA 90 bp CAAAACCATAATAAAGCTAGTCTTCCTAGTTTGTGCTTGCCTCCCAAATTAAAAATGTGTCTTGTCAACTaGTTCCTGCTTGACCTGCAA +
Preference number: 4 (lower is better)
Translates to: QNHNKASLPSLCLPPKLKMCLVN*FLLDLQ
Trigger: TTGCAGGTCAAGCAGGAAGCAGTTGACAAGACACAT...TTTTAATTTGGGAGGCAAGCACAAACTAGGAAGACTAGCTTTATTATGGTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR GCA 90 bp TTTGACCACATAAAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAATACAGTAATCCCAGGTaGAACCCAACTCATTATGAC +
Preference number: 4 (lower is better)
Translates to: FDHIKKLRAVVQSLLNYKYSNPR*NPTHYD
Trigger: GTCATAATGAGTTGGGTTGCACCTGGGATTACTGTA...TTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTTTATGTGGTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR CCA 90 bp CAAAACCATAATAAAGCTAGTCTTCCTAGTTTGTGCTTGCCTCCCAAATTAAAATTCGCCATAGATGGATaGAGGATAAGGATACAGCCT +
Preference number: 4 (lower is better)
Translates to: QNHNKASLPSLCLPPKLKFAIDG*RIRIQP
Trigger: AGGCTGTATCCTTATCCTCCATCCATCTATGGCGAA...TTTTAATTTGGGAGGCAAGCACAAACTAGGAAGACTAGCTTTATTATGGTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CCA 90 bp AAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAACCTTTGCTGGCAATTTTTCTTCGATCGTaGACGAAAAATATCAGCTTG +
Preference number: 4 (lower is better)
Translates to: KKLRAVVQSLLNYKPLLAIFLRS*TKNISL
Trigger: CAAGCTGATATTTTTCGTCCACGATCGAAGAAAAAT...TGCCAGCAAAGGTTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CCA 90 bp AGTAGAATAAATGCTTCACAAATTGTGCAGGATGTCATACTAAGGCTGTGGTCTTGCTACAAACTGGACTaGCTTCATTTTTCTTCGATC +
Preference number: 4 (lower is better)
Translates to: SRINASQIVQDVILRLWSCYKLD*LHFSSI
Trigger: GATCGAAGAAAAATGAAGCCAGTCCAGTTTGTAGCA...AGACCACAGCCTTAGTATGACATCCTGCACAATTTGTGAAGCATTTATTCTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR CCA 90 bp ACAGAGCATTTAGCACTGATACTTAGCACCTGCTACTTTCATTATCTAGTTTTTCTCAAAATATGGCTATaGGCCACAATTGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: TEHLALILSTCYFHYLVFLKIWL*ATIAQQ
Trigger: CTGCTGAGCAATTGTGGCCCATAGCCATATTTTGAG...AAAAACTAGATAATGAAAGTAGCAGGTGCTAAGTATCAGTGCTAAATGCTCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CCA 90 bp CTATTGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTAGAAACTTAGGGCAGTaGTTCAGTCCCTTCTTAATT +
Preference number: 4 (lower is better)
Translates to: LLQRLQNVAQILKTADSIRNLGQ*FSPFLI
Trigger: AATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCT...AATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CCA 90 bp TTTGACCACATAAAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAAAGAAGTGAAGAGTTTTaGCTCTGTTTGCAACTGTCC +
Preference number: 4 (lower is better)
Translates to: FDHIKKLRAVVQSLLNYKRSEEF*LCLQLS
Trigger: GGACAGTTGCAAACAGAGCCAAAACTCTTCACTTCT...TTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTTTATGTGGTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR TCA 90 bp TTGGAATGCTCCCCAGAACTTACAAGGCGGTTTTTAAAGTGTGATATTCCAATACTCAGTCAAGTCTCATaGTCTAGATATAAGAACAAG +
Preference number: 4 (lower is better)
Translates to: LECSPELTRRFLKCDIPILSQVS*SRYKNK
Trigger: CTTGTTCTTATATCTAGATCATGAGACTTGACTGAG...TATTGGAATATCACACTTTAAAAACCGCCTTGTAAGTTCTGGGGAGCATTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR TCA 90 bp ACAGAGCATTTAGCACTGATACTTAGCACCTGCTACTTTCATTATCTAGTTTTTACCATGACCAGTTACTaGTTTGATTTCCCTTGGCTA +
Preference number: 4 (lower is better)
Translates to: TEHLALILSTCYFHYLVFTMTSY*FDFPWL
Trigger: TAGCCAAGGGAAATCAAATCAGTAACTGGTCATGGT...AAAAACTAGATAATGAAAGTAGCAGGTGCTAAGTATCAGTGCTAAATGCTCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR TCA 90 bp ACAGAGCATTTAGCACTGATACTTAGCACCTGCTACTTTCATTATCTAGTTTTTTATAGACAATCCTGGTaGGAAATCCAACCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: TEHLALILSTCYFHYLVFYRQSW*EIQPAD
Trigger: ATCAGCTGGTTGGATTTCTCACCAGGATTGTCTATA...AAAAACTAGATAATGAAAGTAGCAGGTGCTAAGTATCAGTGCTAAATGCTCTGT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000297146.7
ENST00000610164.1
CDS-3UTR TCA 90 bp ATAGAATTAACTACATGGGAGCTGGTTCTAAAATACAACACGCTGATTCGTGTAGTGAATACACAGAAGTaGAGAGTTTTGGCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: IELTTWELVLKYNTLIRVVNTQK*RVLALF
Trigger: AAACAGAGCCAAAACTCTTCACTTCTGTGTATTCAC...TACACGAATCAGCGTGTTGTATTTTAGAACCAGCTCCCATGTAGTTAATTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR TCA 90 bp ACAGAGCATTTAGCACTGATACTTAGCACCTGCTACTTTCATTATCTAGTTTTTTTAACCCAAAGGGATTaGGCAGCTAATGGACATCAT +
Preference number: 4 (lower is better)
Translates to: TEHLALILSTCYFHYLVFLTQRD*AANGHH
Trigger: ATGATGTCCATTAGCTGCTCAATCCCTTTGGGTTAA...AAAAACTAGATAATGAAAGTAGCAGGTGCTAAGTATCAGTGCTAAATGCTCTGT
38% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR GCA 90 bp ACAGAGCATTTAGCACTGATACTTAGCACCTGCTACTTTCATTATCTAGTTTTTCAGGAAGTAGTAAGGTaGTCTATGCAAGGTCTTATC +
Preference number: 4 (lower is better)
Translates to: TEHLALILSTCYFHYLVFQEVVR*SMQGLI
Trigger: GATAAGACCTTGCATAGAGCACCTTACTACTTCCTG...AAAAACTAGATAATGAAAGTAGCAGGTGCTAAGTATCAGTGCTAAATGCTCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR GCA 90 bp ACAGAGCATTTAGCACTGATACTTAGCACCTGCTACTTTCATTATCTAGTTTTTGTAACCTGGATTTTCTaGAGTAAAGAAGGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: TEHLALILSTCYFHYLVFVTWIF*SKEGLC
Trigger: GCACAACCCTTCTTTACTGCAGAAAATCCAGGTTAC...AAAAACTAGATAATGAAAGTAGCAGGTGCTAAGTATCAGTGCTAAATGCTCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR GCA 90 bp GAATTTCTTCTCAAAATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAATAAATGATCTTCCATaGACTTTTAGATGCATGACC +
Preference number: 4 (lower is better)
Translates to: EFLLKIWLWATIAQQRRLINDLP*TFRCMT
Trigger: GGTCATGCATCTAAAAGTGCATGGAAGATCATTTAT...TAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATTTTGAGAAGAAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR CCA 90 bp ATAGAATTAACTACATGGGAGCTGGTTCTAAAATACAACACGCTGATTCGTGTATGCTACAAACTGGACTaGCTTCATTTTTCTTCGATC +
Preference number: 4 (lower is better)
Translates to: IELTTWELVLKYNTLIRVCYKLD*LHFSSI
Trigger: GATCGAAGAAAAATGAAGCCAGTCCAGTTTGTAGCA...TACACGAATCAGCGTGTTGTATTTTAGAACCAGCTCCCATGTAGTTAATTCTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR CCA 90 bp ACCAAGGAGACTTTATTGCTAGATCCAACTCACTGTTGTGCATTAAATTTTGTCACTGCTGCTACAAACTaGACTGGCTTCATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: TKETLLLDPTHCCALNFVTAATN*TGFIFL
Trigger: AAGAAAAATGAAGCCAGTCCAGTTTGTAGCAGCAGT...GACAAAATTTAATGCACAACAGTGAGTTGGATCTAGCAATAAAGTCTCCTTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CCA 90 bp ATAGAATTAACTACATGGGAGCTGGTTCTAAAATACAACACGCTGATTCGTGTAGTTCCCTTGGTAACCTaGATTTTCTGCAGTAAAGAA +
Preference number: 4 (lower is better)
Translates to: IELTTWELVLKYNTLIRVVPLVT*IFCSKE
Trigger: TTCTTTACTGCAGAAAATCCAGGTTACCAAGGGAAC...TACACGAATCAGCGTGTTGTATTTTAGAACCAGCTCCCATGTAGTTAATTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR CCA 90 bp TTGGAATGCTCCCCAGAACTTACAAGGCGGTTTTTAAAGTGTGATATTCCAATACATACATTTCCAGTCTaGAATGTAGTAGCTACAAGA +
Preference number: 4 (lower is better)
Translates to: LECSPELTRRFLKCDIPIHTFPV*NVVATR
Trigger: TCTTGTAGCTACTACATTCCAGACTGGAAATGTATG...TATTGGAATATCACACTTTAAAAACCGCCTTGTAAGTTCTGGGGAGCATTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CCA 90 bp GAATTTCTTCTCAAAATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAAGGCAAATGGATAAGTaGCCATATTTATGTGTTAAC +
Preference number: 4 (lower is better)
Translates to: EFLLKIWLWATIAQQRRLRQMDK*PYLCVN
Trigger: GTTAACACATAAATATGGCCACTTATCCATTTGCCT...TAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATTTTGAGAAGAAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297146.7
ENST00000610164.1
3UTR CAA 72 bp ATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTCTaGAATTTCTTCTCAAAATATGGCTATGGGCCACAA +
Preference number: 4 (lower is better)
Translates to: MLPKSLKLLIPF*NFFSKYGYGPQ
Trigger: TTGTGGCCCATAGCCATATTTTGAGAAGAAATTCAAGAATGGAATCAGCAGTTTTAAGGATTTGGGCAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR TCA 90 bp TTTGACCACATAAAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAACTCAGTCAAGTCTCATaGTCTAGATATAAGAACAAG +
Preference number: 4 (lower is better)
Translates to: FDHIKKLRAVVQSLLNYKLSQVS*SRYKNK
Trigger: CTTGTTCTTATATCTAGATCATGAGACTTGACTGAG...TTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTTTATGTGGTCAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR TCA 90 bp TTTGACCACATAAAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAAAACAAATTGCAGATCTaGGGATATCTGAACAGCAAA +
Preference number: 4 (lower is better)
Translates to: FDHIKKLRAVVQSLLNYKNKLQI*GYLNSK
Trigger: TTTGCTGTTCAGATATCCTCAGATCTGCAATTTGTT...TTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTTTATGTGGTCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR TCA 90 bp ACCAAGGAGACTTTATTGCTAGATCCAACTCACTGTTGTGCATTAAATTTTGTCACTACTGTTACCAGTTaGGTTACAAATGGCATTGAT +
Preference number: 4 (lower is better)
Translates to: TKETLLLDPTHCCALNFVTTVTS*VTNGID
Trigger: ATCAATGCCATTTGTAACTCAACTGGTAACAGTAGT...GACAAAATTTAATGCACAACAGTGAGTTGGATCTAGCAATAAAGTCTCCTTGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR TCA 90 bp ACAGAGCATTTAGCACTGATACTTAGCACCTGCTACTTTCATTATCTAGTTTTTGGTTACCATCTACCTTaGTTAATGTCTTTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: TEHLALILSTCYFHYLVFGYHLP*LMSLAS
Trigger: ACTGGCTAAAGACATTAATCAAGGTAGATGGTAACC...AAAAACTAGATAATGAAAGTAGCAGGTGCTAAGTATCAGTGCTAAATGCTCTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR GCA 90 bp ACCAAGGAGACTTTATTGCTAGATCCAACTCACTGTTGTGCATTAAATTTTGTCCATACATCAACTGCCTaGTTCTTAGAACAGTTTAGA +
Preference number: 4 (lower is better)
Translates to: TKETLLLDPTHCCALNFVHTSTA*FLEQFR
Trigger: TCTAAACTGTTCTAAGAAGCAGGCAGTTGATGTATG...GACAAAATTTAATGCACAACAGTGAGTTGGATCTAGCAATAAAGTCTCCTTGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR GCA 90 bp TTTGACCACATAAAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAACATACATCAACTGCCTaGTTCTTAGAACAGTTTAGA +
Preference number: 4 (lower is better)
Translates to: FDHIKKLRAVVQSLLNYKHTSTA*FLEQFR
Trigger: TCTAAACTGTTCTAAGAAGCAGGCAGTTGATGTATG...TTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTTTATGTGGTCAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR GCA 90 bp TTTGACCACATAAAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAAAATGAGAGACTGTTCTaGTTTGTTTTCCACTATGCA +
Preference number: 4 (lower is better)
Translates to: FDHIKKLRAVVQSLLNYKNERLF*FVFHYA
Trigger: TGCATAGTGGAAAACAAAGCAGAACAGTCTCTCATT...TTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTTTATGTGGTCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297146.7
ENST00000610164.1
CDS-3UTR CCA 90 bp AGTAGAATAAATGCTTCACAAATTGTGCAGGATGTCATACTAAGGCTGTGGTCTATTTTTCTTCGATCGTaGACGAAAAATATCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SRINASQIVQDVILRLWSIFLRS*TKNISL
Trigger: CAAGCTGATATTTTTCGTCCACGATCGAAGAAAAAT...AGACCACAGCCTTAGTATGACATCCTGCACAATTTGTGAAGCATTTATTCTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR CCA 90 bp ACAGAGCATTTAGCACTGATACTTAGCACCTGCTACTTTCATTATCTAGTTTTTTGCTACAAACTGGACTaGCTTCATTTTTCTTCGATC +
Preference number: 4 (lower is better)
Translates to: TEHLALILSTCYFHYLVFCYKLD*LHFSSI
Trigger: GATCGAAGAAAAATGAAGCCAGTCCAGTTTGTAGCA...AAAAACTAGATAATGAAAGTAGCAGGTGCTAAGTATCAGTGCTAAATGCTCTGT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CCA 90 bp ACAGAGCATTTAGCACTGATACTTAGCACCTGCTACTTTCATTATCTAGTTTTTAGAAACTTAGGGCAGTaGTTCAGTCCCTTCTTAATT +
Preference number: 4 (lower is better)
Translates to: TEHLALILSTCYFHYLVFRNLGQ*FSPFLI
Trigger: AATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCT...AAAAACTAGATAATGAAAGTAGCAGGTGCTAAGTATCAGTGCTAAATGCTCTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CCA 90 bp TGTGCCTTCAGTAGAATAAATGCTTCACAAATTGTGCAGGATGTCATACTAAGGAGGCAAATGGATAAGTaGCCATATTTATGTGTTAAC +
Preference number: 4 (lower is better)
Translates to: CAFSRINASQIVQDVILRRQMDK*PYLCVN
Trigger: GTTAACACATAAATATGGCCACTTATCCATTTGCCT...CCTTAGTATGACATCCTGCACAATTTGTGAAGCATTTATTCTACTGAAGGCACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CCA 90 bp AGATGCACACAAATAAGTCATTCCTTTGATTGCATTTTACCCACGCATTTTCATTTGGAAGTGGATAGTTaGGATATGAAGGGAACTTTG +
Preference number: 4 (lower is better)
Translates to: RCTQISHSFDCILPTHFHLEVDS*DMKGTL
Trigger: CAAAGTTCCCTTCATATCCCAACTATCCACTTCCAA...ATGAAAATGCGTGGGTAAAATGCAATCAAAGGAATGACTTATTTGTGTGCATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR TCA 90 bp ACAGAGCATTTAGCACTGATACTTAGCACCTGCTACTTTCATTATCTAGTTTTTAACAAATTGCAGATCTaGGGATATCTGAACAGCAAA +
Preference number: 4 (lower is better)
Translates to: TEHLALILSTCYFHYLVFNKLQI*GYLNSK
Trigger: TTTGCTGTTCAGATATCCTCAGATCTGCAATTTGTT...AAAAACTAGATAATGAAAGTAGCAGGTGCTAAGTATCAGTGCTAAATGCTCTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR TCA 90 bp ACAGAGCATTTAGCACTGATACTTAGCACCTGCTACTTTCATTATCTAGTTTTTCAACCCAACTCATTATaGCACAGTTTAGCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: TEHLALILSTCYFHYLVFQPNSL*HSLAEK
Trigger: TTTTTCAGCTAAACTGTGTCATAATGAGTTGGGTTG...AAAAACTAGATAATGAAAGTAGCAGGTGCTAAGTATCAGTGCTAAATGCTCTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR GCA 90 bp ACCAAGGAGACTTTATTGCTAGATCCAACTCACTGTTGTGCATTAAATTTTGTCATAAATGATCTTCCATaGACTTTTAGATGCATGACC +
Preference number: 4 (lower is better)
Translates to: TKETLLLDPTHCCALNFVINDLP*TFRCMT
Trigger: GGTCATGCATCTAAAAGTGCATGGAAGATCATTTAT...GACAAAATTTAATGCACAACAGTGAGTTGGATCTAGCAATAAAGTCTCCTTGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CCA 90 bp TTTGACCACATAAAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAAATTTTTCTTCGATCGTaGACGAAAAATATCAGCTTG +
Preference number: 4 (lower is better)
Translates to: FDHIKKLRAVVQSLLNYKIFLRS*TKNISL
Trigger: CAAGCTGATATTTTTCGTCCACGATCGAAGAAAAAT...TTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTTTATGTGGTCAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR GCA 90 bp ACAGAGCATTTAGCACTGATACTTAGCACCTGCTACTTTCATTATCTAGTTTTTAGTCATTCCTTTGATTaGATTTTACCCACGCATTTT +
Preference number: 4 (lower is better)
Translates to: TEHLALILSTCYFHYLVFSHSFD*ILPTHF
Trigger: AAAATGCGTGGGTAAAATGCAATCAAAGGAATGACT...AAAAACTAGATAATGAAAGTAGCAGGTGCTAAGTATCAGTGCTAAATGCTCTGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR CCA 90 bp CAAAACCATAATAAAGCTAGTCTTCCTAGTTTGTGCTTGCCTCCCAAATTAAAATTCTTACCAAAACTGTaGGAATCGGTTATTCCAAAT +
Preference number: 4 (lower is better)
Translates to: QNHNKASLPSLCLPPKLKFLPKL*ESVIPN
Trigger: ATTTGGAATAACCGATTCCCACAGTTTTGGTAAGAA...TTTTAATTTGGGAGGCAAGCACAAACTAGGAAGACTAGCTTTATTATGGTTTTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CCA 90 bp AGATGCACACAAATAAGTCATTCCTTTGATTGCATTTTACCCACGCATTTTCATAATAACCCACAATTCTaGTTACCATCTACCTTGATT +
Preference number: 4 (lower is better)
Translates to: RCTQISHSFDCILPTHFHNNPQF*LPSTLI
Trigger: AATCAAGGTAGATGGTAACCAGAATTGTGGGTTATT...ATGAAAATGCGTGGGTAAAATGCAATCAAAGGAATGACTTATTTGTGTGCATCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS GCA 90 bp GGGCCGCGGCGGCGGCGGCTGCGGTGGCGAGGGCGGCGGCGGGGCTaGTTCAGCCTCTGTGGAACCAGCAGGAACCCCTACCTGACTCCA +
Preference number: 5 (lower is better)
Translates to: GPRRRRLRWRGRRRG*FSLCGTSRNPYLTP
Trigger: TGGAGTCAGGTAGGGGTTCCTGCTGGTTCCACAGAGGCTGAAGCAGCCCCGCCGCCGCCCTCGCCACCGCAGCCGCCGCCGCCGCGGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424100.2
CDS TCA 90 bp CTAAGACCAATAGCCTTCTTCTGCCTGTGGTGTTTGCATTTTGCCTaGTGCCCAGCAAGGTGGGTGGTGTGGGACCCCTTCCAAATCCTG +
Preference number: 5 (lower is better)
Translates to: LRPIAFFCLWCLHFA*CPARWVVWDPFQIL
Trigger: CAGGATTTGGAAGGGGTCCCACACCACCCACCTTGCTGGGCATCAGGCAAAATGCAAACACCACAGGCAGAAGAAGGCTATTGGTCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS GCA 90 bp TCGTCTAAGACCAATAGCCTTCTTCTGCCTGTGGTGTTTGCATTTTaGCTGATGCCCAGCAAGGTGGGTGGTGTGGGACCCCTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: SSKTNSLLLPVVFAF*LMPSKVGGVGPLPN
Trigger: ATTTGGAAGGGGTCCCACACCACCCACCTTGCTGGGCATCAGGCAAAATGCAAACACCACAGGCAGAAGAAGGCTATTGGTCTTAGACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CAA 90 bp CTGAGCACGATGTTGTCCTACGTCCCCAGAAGGAGCCAAGGAGGCAGCTATGAAGTGTTGGAAGGTGCATaGATCTTCCTCCCTAATGAA +
Preference number: 5 (lower is better)
Translates to: LSTMLSYVPRRSQGGSYEVLEGA*IFLPNE
Trigger: TTCATTAGGGAGGAAGATCAATGCACCTTCCAACAC...TTCATAGCTGCCTCCTTGGCTCCTTCTGGGGACGTAGGACAACATCGTGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR CAA 90 bp GCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATATGGAGATCAGGAGGTaGCCCACCACGCTGACTCCT +
Preference number: 5 (lower is better)
Translates to: AMGHNCSAEKVSFHKAKDMEIRR*PTTLTP
Trigger: AGGAGTCAGCGTGGTGGGCAACCTCCTGATCTCCAT...ATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CAA 90 bp ACAGAGCATTTAGCACTGATACTTAGCACCTGCTACTTTCATTATCTAGTTTTTCGCGCTGGAGCCTCCTaGAGCTCCAGCCGCGTCCTC +
Preference number: 5 (lower is better)
Translates to: TEHLALILSTCYFHYLVFRAGAS*SSSRVL
Trigger: GAGGACGCGGCTGGAGCTCAAGGAGGCTCCAGCGCG...AAAAACTAGATAATGAAAGTAGCAGGTGCTAAGTATCAGTGCTAAATGCTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424100.2
CDS GCA 90 bp TTTTGCCATCAGAATATGCGAAGATGGGGAGAGAGATTGCTTCTGTaGTGCAAAGGAACCGTTCCCGGTGATTCGCAGTCTGATATTCCT +
Preference number: 5 (lower is better)
Translates to: FCHQNMRRWGERLLL*CKGTVPGDSQSDIP
Trigger: AGGAATATCAGACTGCGAATCACCGGGAACGGTTCCTTTGCAGCACAGAAGCAATCTCTCTCCCCATCTTCGCATATTCTGATGGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000438062.5
ENST00000449591.2
ENST00000487573.1
ENST00000610164.1
CDS-3UTR CAA 90 bp CTGTGGAGAAATGGGCAAGTTACTCACCTCTTTCTGCCTTGGTTAATACCTGCAAGATGGGGAGAGAGATaGCTTCTGTGCTGCAAAGGA +
Preference number: 5 (lower is better)
Translates to: LWRNGQVTHLFLPWLIPARWGER*LLCCKG
Trigger: TCCTTTGCAGCACAGAAGCAATCTCTCTCCCCATCT...TGCAGGTATTAACCAAGGCAGAAAGAGGTGAGTAACTTGCCCATTTCTCCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CAA 90 bp GAATTTCTTCTCAAAATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAATGGAGATCAGGAGGTaGCCCACCACGCTGACTCCT +
Preference number: 5 (lower is better)
Translates to: EFLLKIWLWATIAQQRRLMEIRR*PTTLTP
Trigger: AGGAGTCAGCGTGGTGGGCAACCTCCTGATCTCCAT...TAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATTTTGAGAAGAAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CAA 90 bp AATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTGGCAGCATTAAGCTTTaGTCCCTTCGTGGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: NMAMGHNCSAEKVSFHKAGSIKL*SLRGCF
Trigger: GAAGCAGCCACGAAGGGACAAAAGCTTAATGCTGCC...AGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424100.2
CDS-3UTR CAA 90 bp CTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATTCCTGAAGGAGCGGTGTaGGAAGGTGCATTGATCTTC +
Preference number: 5 (lower is better)
Translates to: LWATIAQQRRLVFTRLKIPEGAV*EGALIF
Trigger: GAAGATCAATGCACCTTCCAACACCGCTCCTTCAGG...AATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CAA 90 bp AATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTTGTGGTGTTTGCATTTaGCCTGATGCCCAGCAAGGT +
Preference number: 5 (lower is better)
Translates to: NMAMGHNCSAEKVSFHKACGVCI*PDAQQG
Trigger: ACCTTGCTGGGCATCAGGCAAAATGCAAACACCACA...AGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CAA 90 bp ATCACCACTATTATGAAAAACAATTTAAAGGCCGTTCAGCTCAGATGTGTGCTCACGTGGCCGTTGCTCTaGACTCCTCAGTCCCCAACT +
Preference number: 5 (lower is better)
Translates to: ITTIMKNNLKAVQLRCVLTWPLL*TPQSPT
Trigger: AGTTGGGGACTGAGGAGTCAAGAGCAACGGCCACGT...GAGCACACATCTGAGCTGAACGGCCTTTAAATTGTTTTTCATAATAGTGGTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CAA 90 bp ACAGAGCATTTAGCACTGATACTTAGCACCTGCTACTTTCATTATCTAGTTTTTAGTCTCACAGGGAAGTaGGACACCCCCTGCCCCGCT +
Preference number: 5 (lower is better)
Translates to: TEHLALILSTCYFHYLVFSLTGK*DTPCPA
Trigger: AGCGGGGCAGGGGGTGTCCAACTTCCCTGTGAGACT...AAAAACTAGATAATGAAAGTAGCAGGTGCTAAGTATCAGTGCTAAATGCTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CAA 90 bp AAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAACCTTTGCTGGCAAGCTGGCTGGGTTTATaGACTGCCCTGTCCAATCCA +
Preference number: 5 (lower is better)
Translates to: KKLRAVVQSLLNYKPLLASWLGL*TALSNP
Trigger: TGGATTGGACAGGGCAGTCAATAAACCCAGCCAGCT...TGCCAGCAAAGGTTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424100.2
CDS-3UTR CAA 90 bp AAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAACCTTTGCTGGCATTTTGCCTTAGTGCCTaGACTGAGCATCCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: KKLRAVVQSLLNYKPLLAFCLSA*TEHPGR
Trigger: CCTGCCTGGATGCTCAGTCAAGGCACTAAGGCAAAA...TGCCAGCAAAGGTTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424100.2
CDS-3UTR CAA 90 bp CTGGTTCTAAAATACAACACGCTGATTCGTGTAAGTGTGGGTGAAAGGTTCCTGGGAAACACAGTCTCCTaGATTTCCTCTGGGGACCTT +
Preference number: 5 (lower is better)
Translates to: LVLKYNTLIRVSVGERFLGNTVS*ISSGDL
Trigger: AAGGTCCCCAGAGGAAATCAAGGAGACTGTGTTTCC...CAGGAACCTTTCACCCACACTTACACGAATCAGCGTGTTGTATTTTAGAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR CAA 90 bp AAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAACCTTTGCTGGCAAGATGGGGAGAGAGATaGCTTCTGTGCTGCAAAGGA +
Preference number: 5 (lower is better)
Translates to: KKLRAVVQSLLNYKPLLARWGER*LLCCKG
Trigger: TCCTTTGCAGCACAGAAGCAATCTCTCTCCCCATCT...TGCCAGCAAAGGTTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CAA 90 bp TTTGACCACATAAAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAAATGGAGATCAGGAGGTaGCCCACCACGCTGACTCCT +
Preference number: 5 (lower is better)
Translates to: FDHIKKLRAVVQSLLNYKMEIRR*PTTLTP
Trigger: AGGAGTCAGCGTGGTGGGCAACCTCCTGATCTCCAT...TTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTTTATGTGGTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CAA 90 bp CTGTGGAGAAATGGGCAAGTTACTCACCTCTTTCTGCCTTGGTTAATACCTGCAGTGTTGGAAGGTGCATaGATCTTCCTCCCTAATGAA +
Preference number: 5 (lower is better)
Translates to: LWRNGQVTHLFLPWLIPAVLEGA*IFLPNE
Trigger: TTCATTAGGGAGGAAGATCAATGCACCTTCCAACAC...TGCAGGTATTAACCAAGGCAGAAAGAGGTGAGTAACTTGCCCATTTCTCCACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CAA 90 bp ATGAGGTCAGAATGCTCACTAATTCATGGCTTGAGCTGTCCTTATAAGAGCAAACCTGAAGGAGCGGTGTaGGAAGGTGCATTGATCTTC +
Preference number: 5 (lower is better)
Translates to: MRSECSLIHGLSCPYKSKPEGAV*EGALIF
Trigger: GAAGATCAATGCACCTTCCAACACCGCTCCTTCAGG...TTTGCTCTTATAAGGACAGCTCAAGCCATGAATTAGTGAGCATTCTGACCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CAA 90 bp TGTTTGCAACTGTCCTACAGTAATCCCAGGTGCAACCCAACTCATTATGACACAAGGATTGATTCCTGCTaGGGCAAAACTCATCCAGAC +
Preference number: 5 (lower is better)
Translates to: CLQLSYSNPRCNPTHYDTRIDSC*GKTHPD
Trigger: GTCTGGATGAGTTTTGCCCAAGCAGGAATCAATCCT...TGTGTCATAATGAGTTGGGTTGCACCTGGGATTACTGTAGGACAGTTGCAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR CAA 90 bp CTGTGGAGAAATGGGCAAGTTACTCACCTCTTTCTGCCTTGGTTAATACCTGCACTGGTACCATTAATGTaGCCTCCCAGACCAATATCT +
Preference number: 5 (lower is better)
Translates to: LWRNGQVTHLFLPWLIPALVPLM*PPRPIS
Trigger: AGATATTGGTCTGGGAGGCAACATTAATGGTACCAG...TGCAGGTATTAACCAAGGCAGAAAGAGGTGAGTAACTTGCCCATTTCTCCACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CAA 90 bp ACCAAGGAGACTTTATTGCTAGATCCAACTCACTGTTGTGCATTAAATTTTGTCAGCTTCACGTGGCCGTaGCTCTTGACTCCTCAGTCC +
Preference number: 5 (lower is better)
Translates to: TKETLLLDPTHCCALNFVSFTWP*LLTPQS
Trigger: GGACTGAGGAGTCAAGAGCAACGGCCACGTGAAGCT...GACAAAATTTAATGCACAACAGTGAGTTGGATCTAGCAATAAAGTCTCCTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS GCA 90 bp AACGGTCGGATGATACCACAGACACCACAAAGCCTGACACGTGGGTaGTTAGGAATGCCTCTAGAATCATGCATTTTCTTATTTTACCAT +
Preference number: 5 (lower is better)
Translates to: NGRMIPQTPQSLTRG*LGMPLESCIFLFYH
Trigger: ATGGTAAAATAAGAAAATGCATGATTCTAGAGGCATTCCTAAGCACCCACGTGTCAGGCTTTGTGGTGTCTGTGGTATCATCCGACCGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297146.7
ENST00000487573.1
CDS CCA 90 bp TCCAAACGGTCGGATGATACCACAGACACCACAAAGCCTGACACGTaGGTGCTTAGGAATGCCTCTAGAATCATGCATTTTCTTATTTTA +
Preference number: 5 (lower is better)
Translates to: SKRSDDTTDTTKPDT*VLRNASRIMHFLIL
Trigger: TAAAATAAGAAAATGCATGATTCTAGAGGCATTCCTAAGCACCCACGTGTCAGGCTTTGTGGTGTCTGTGGTATCATCCGACCGTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297146.7
ENST00000487573.1
CDS-3UTR CAA 90 bp TGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTCTTGAGATGGGGAGAGAGATaGCTTCTGTGCTGCAAAGGA +
Preference number: 5 (lower is better)
Translates to: CKDCRMLPKSLKLLIPFLRWGER*LLCCKG
Trigger: TCCTTTGCAGCACAGAAGCAATCTCTCTCCCCATCT...CAAGAATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CAA 90 bp ACAGAGCATTTAGCACTGATACTTAGCACCTGCTACTTTCATTATCTAGTTTTTATGGAGATCAGGAGGTaGCCCACCACGCTGACTCCT +
Preference number: 5 (lower is better)
Translates to: TEHLALILSTCYFHYLVFMEIRR*PTTLTP
Trigger: AGGAGTCAGCGTGGTGGGCAACCTCCTGATCTCCAT...AAAAACTAGATAATGAAAGTAGCAGGTGCTAAGTATCAGTGCTAAATGCTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CAA 90 bp TGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTCTTGTGTGGTGTTTGCATTTaGCCTGATGCCCAGCAAGGT +
Preference number: 5 (lower is better)
Translates to: CKDCRMLPKSLKLLIPFLCGVCI*PDAQQG
Trigger: ACCTTGCTGGGCATCAGGCAAAATGCAAACACCACA...CAAGAATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CAA 90 bp AAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAACCTTTGCTGGCACACAGTAAGGTTCCCTaGGTAACCTGGATTTTCTGC +
Preference number: 5 (lower is better)
Translates to: KKLRAVVQSLLNYKPLLAHSKVP*VTWIFC
Trigger: GCAGAAAATCCAGGTTACCAAGGGAACCTTACTGTG...TGCCAGCAAAGGTTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CAA 90 bp CTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATTGGCTGTGGTCTCCCCTaGACAGCTGACTTAAAATAT +
Preference number: 5 (lower is better)
Translates to: LWATIAQQRRLVFTRLKIGCGLP*TADLKY
Trigger: ATATTTTAAGTCAGCTGTCAAGGGGAGACCACAGCC...AATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR CAA 90 bp ATAGAATTAACTACATGGGAGCTGGTTCTAAAATACAACACGCTGATTCGTGTATGTTTCACAAGTTACTaGGGAGGGCCCCCGCAAGTC +
Preference number: 5 (lower is better)
Translates to: IELTTWELVLKYNTLIRVCFTSY*GGPPQV
Trigger: GACTTGCGGGGGCCCTCCCAAGTAACTTGTGAAACA...TACACGAATCAGCGTGTTGTATTTTAGAACCAGCTCCCATGTAGTTAATTCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR CAA 90 bp ACCAAGTTTTCAGCTGATAGGCGATTAGGGAGTTTTATTGTATTCCAATTAAGGCCTGAAGGAGCGGTGTaGGAAGGTGCATTGATCTTC +
Preference number: 5 (lower is better)
Translates to: TKFSADRRLGSFIVFQLRPEGAV*EGALIF
Trigger: GAAGATCAATGCACCTTCCAACACCGCTCCTTCAGG...CCTTAATTGGAATACAATAAAACTCCCTAATCGCCTATCAGCTGAAAACTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR CAA 90 bp AGTAGAATAAATGCTTCACAAATTGTGCAGGATGTCATACTAAGGCTGTGGTCTTGTGGTGTTTGCATTTaGCCTGATGCCCAGCAAGGT +
Preference number: 5 (lower is better)
Translates to: SRINASQIVQDVILRLWSCGVCI*PDAQQG
Trigger: ACCTTGCTGGGCATCAGGCAAAATGCAAACACCACA...AGACCACAGCCTTAGTATGACATCCTGCACAATTTGTGAAGCATTTATTCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR CAA 90 bp GAATTTCTTCTCAAAATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAAGGATTGATTCCTGCTaGGGCAAAACTCATCCAGAC +
Preference number: 5 (lower is better)
Translates to: EFLLKIWLWATIAQQRRLRIDSC*GKTHPD
Trigger: GTCTGGATGAGTTTTGCCCAAGCAGGAATCAATCCT...TAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATTTTGAGAAGAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CAA 90 bp GATGTGTGCTCAGTCCAAGAGGGAGACACATTATTATTGATAATCAGTCTCACACACAGTAAGGTTCCCTaGGTAACCTGGATTTTCTGC +
Preference number: 5 (lower is better)
Translates to: DVCSVQEGDTLLLIISLTHSKVP*VTWIFC
Trigger: GCAGAAAATCCAGGTTACCAAGGGAACCTTACTGTG...TGTGAGACTGATTATCAATAATAATGTGTCTCCCTCTTGGACTGAGCACACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CAA 90 bp GCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATAACCAATATACTGCTTaGGAATGCTCCCCAGAACTT +
Preference number: 5 (lower is better)
Translates to: AMGHNCSAEKVSFHKAKDNQYTA*ECSPEL
Trigger: AAGTTCTGGGGAGCATTCCAAAGCAGTATATTGGTT...ATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR CAA 90 bp CTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATTCTGGTACCATTAATGTaGCCTCCCAGACCAATATCT +
Preference number: 5 (lower is better)
Translates to: LWATIAQQRRLVFTRLKILVPLM*PPRPIS
Trigger: AGATATTGGTCTGGGAGGCAACATTAATGGTACCAG...AATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR CAA 90 bp TGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTCTTGGGCTGTGGTCTCCCCTaGACAGCTGACTTAAAATAT +
Preference number: 5 (lower is better)
Translates to: CKDCRMLPKSLKLLIPFLGCGLP*TADLKY
Trigger: ATATTTTAAGTCAGCTGTCAAGGGGAGACCACAGCC...CAAGAATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR CAA 90 bp CTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATTTCACCTCTTTCTGCCTaGGTTAATACCTGCATAGGA +
Preference number: 5 (lower is better)
Translates to: LWATIAQQRRLVFTRLKISPLSA*VNTCIG
Trigger: TCCTATGCAGGTATTAACCAAGGCAGAAAGAGGTGA...AATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CAA 90 bp CTATTGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTGCCCTACTGTTGGTGTaGGATATCCCGACAGACTAT +
Preference number: 5 (lower is better)
Translates to: LLQRLQNVAQILKTADSIALLLV*DIPTDY
Trigger: ATAGTCTGTCGGGATATCCAACACCAACAGTAGGGC...AATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424100.2
CDS-3UTR CAA 90 bp TTTGACCACATAAAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAATTTCTGAGCACGATGTaGTCCTACGTCCCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: FDHIKKLRAVVQSLLNYKFLSTM*SYVPRR
Trigger: CCTTCTGGGGACGTAGGACAACATCGTGCTCAGAAA...TTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTTTATGTGGTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS CCA 90 bp ATTTTGCAAAATGTTGTCAGCTGCATGGCTATAGTTCGCCATAGATaGATGGAGGATAAGGATACAGCCTCAGTCAAGTCTCATGATCTA +
Preference number: 5 (lower is better)
Translates to: ILQNVVSCMAIVRHR*MEDKDTASVKSHDL
Trigger: TAGATCATGAGACTTGACTGAGGCTGTATCCTTATCCTCCATCCATCTATGGCGAACTATAGCCATGCAGCTGACAACATTTTGCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000438062.5
ENST00000449591.2
ENST00000449735.1
ENST00000610164.1
CDS-3UTR CAA 90 bp TTTGACCACATAAAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAAAGATGGGGAGAGAGATaGCTTCTGTGCTGCAAAGGA +
Preference number: 5 (lower is better)
Translates to: FDHIKKLRAVVQSLLNYKRWGER*LLCCKG
Trigger: TCCTTTGCAGCACAGAAGCAATCTCTCTCCCCATCT...TTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTTTATGTGGTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CAA 90 bp TGTGCCTTCAGTAGAATAAATGCTTCACAAATTGTGCAGGATGTCATACTAAGGAAAAGGTCAGCCTCTTaGTATAGAAGCGGTGATGGG +
Preference number: 5 (lower is better)
Translates to: CAFSRINASQIVQDVILRKRSAS*YRSGDG
Trigger: CCCATCACCGCTTCTATACAAAGAGGCTGACCTTTT...CCTTAGTATGACATCCTGCACAATTTGTGAAGCATTTATTCTACTGAAGGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR CAA 90 bp TTTACCCACGCATTTTCATCCTATCTTGCAGGAACATGTGAGTATGTCAGAAAAAAAAGGTCAGCCTCTTaGTATAGAAGCGGTGATGGG +
Preference number: 5 (lower is better)
Translates to: FTHAFSSYLAGTCEYVRKKRSAS*YRSGDG
Trigger: CCCATCACCGCTTCTATACAAAGAGGCTGACCTTTT...TTTTCTGACATACTCACATGTTCCTGCAAGATAGGATGAAAATGCGTGGGTAAA
42% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR CAA 90 bp GAATTTCTTCTCAAAATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTGTTGGAAGGTGCATaGATCTTCCTCCCTAATGAA +
Preference number: 5 (lower is better)
Translates to: EFLLKIWLWATIAQQRRLVLEGA*IFLPNE
Trigger: TTCATTAGGGAGGAAGATCAATGCACCTTCCAACAC...TAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATTTTGAGAAGAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CAA 90 bp CTATTGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTAGGATTGATTCCTGCTaGGGCAAAACTCATCCAGAC +
Preference number: 5 (lower is better)
Translates to: LLQRLQNVAQILKTADSIRIDSC*GKTHPD
Trigger: GTCTGGATGAGTTTTGCCCAAGCAGGAATCAATCCT...AATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CAA 90 bp TGTGCCTTCAGTAGAATAAATGCTTCACAAATTGTGCAGGATGTCATACTAAGGCACAGTAAGGTTCCCTaGGTAACCTGGATTTTCTGC +
Preference number: 5 (lower is better)
Translates to: CAFSRINASQIVQDVILRHSKVP*VTWIFC
Trigger: GCAGAAAATCCAGGTTACCAAGGGAACCTTACTGTG...CCTTAGTATGACATCCTGCACAATTTGTGAAGCATTTATTCTACTGAAGGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR CAA 90 bp TTGGAATGCTCCCCAGAACTTACAAGGCGGTTTTTAAAGTGTGATATTCCAATACACAGTAAGGTTCCCTaGGTAACCTGGATTTTCTGC +
Preference number: 5 (lower is better)
Translates to: LECSPELTRRFLKCDIPIHSKVP*VTWIFC
Trigger: GCAGAAAATCCAGGTTACCAAGGGAACCTTACTGTG...TATTGGAATATCACACTTTAAAAACCGCCTTGTAAGTTCTGGGGAGCATTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR CAA 90 bp GCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATAAAGACTGCAGAATGTaGCCCAAATCCTTAAAACTG +
Preference number: 5 (lower is better)
Translates to: AMGHNCSAEKVSFHKAKDKDCRM*PKSLKL
Trigger: CAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTT...ATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CAA 90 bp TGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTCTTGCTGGTACCATTAATGTaGCCTCCCAGACCAATATCT +
Preference number: 5 (lower is better)
Translates to: CKDCRMLPKSLKLLIPFLLVPLM*PPRPIS
Trigger: AGATATTGGTCTGGGAGGCAACATTAATGGTACCAG...CAAGAATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR CAA 90 bp CTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATTTCACTAATTCATGGCTaGAGCTGTCCTTATAAGAGC +
Preference number: 5 (lower is better)
Translates to: LWATIAQQRRLVFTRLKISLIHG*SCPYKS
Trigger: GCTCTTATAAGGACAGCTCAAGCCATGAATTAGTGA...AATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CAA 90 bp CTATTGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTTCAACTGCTTCCTGCTaGACCTGCAAATGCCAAGTT +
Preference number: 5 (lower is better)
Translates to: LLQRLQNVAQILKTADSISTASC*TCKCQV
Trigger: AACTTGGCATTTGCAGGTCAAGCAGGAAGCAGTTGA...AATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CAA 90 bp GCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATCCTACTGAAGATGCATaGTCTGAATGTACTTCCATT +
Preference number: 5 (lower is better)
Translates to: AMGHNCSAEKVSFHKAKDPTEDA*SECTSI
Trigger: AATGGAAGTACATTCAGACAATGCATCTTCAGTAGG...ATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449591.2
CDS-3UTR CAA 90 bp AAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAACCTTTGCTGGCAGAGTTTTGGCTCTGTTaGCAACTGTCCTACAGTAAT +
Preference number: 5 (lower is better)
Translates to: KKLRAVVQSLLNYKPLLAEFWLC*QLSYSN
Trigger: ATTACTGTAGGACAGTTGCAAACAGAGCCAAAACTC...TGCCAGCAAAGGTTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR CAA 90 bp AATCAGTTAACTTCTATAGACAATCCTGGTGAGAAATCCAACCAGCTGATATCTAAAAGGTCAGCCTCTTaGTATAGAAGCGGTGATGGG +
Preference number: 5 (lower is better)
Translates to: NQLTSIDNPGEKSNQLISKRSAS*YRSGDG
Trigger: CCCATCACCGCTTCTATACAAAGAGGCTGACCTTTT...AGATATCAGCTGGTTGGATTTCTCACCAGGATTGTCTATAGAAGTTAACTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CAA 90 bp TTTGACCACATAAAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAAAAAAGGTCAGCCTCTTaGTATAGAAGCGGTGATGGG +
Preference number: 5 (lower is better)
Translates to: FDHIKKLRAVVQSLLNYKKRSAS*YRSGDG
Trigger: CCCATCACCGCTTCTATACAAAGAGGCTGACCTTTT...TTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTTTATGTGGTCAAA
41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CAA 90 bp ATCACCACTATTATGAAAAACAATTTAAAGGCCGTTCAGCTCAGATGTGTGCTCGTACTACAGGCCCTCTaGCAAAAACTCTCCAATAAC +
Preference number: 5 (lower is better)
Translates to: ITTIMKNNLKAVQLRCVLVLQAL*QKLSNN
Trigger: GTTATTGGAGAGTTTTTGCAAGAGGGCCTGTAGTAC...GAGCACACATCTGAGCTGAACGGCCTTTAAATTGTTTTTCATAATAGTGGTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CAA 90 bp AGTAGAATAAATGCTTCACAAATTGTGCAGGATGTCATACTAAGGCTGTGGTCTGTACTACAGGCCCTCTaGCAAAAACTCTCCAATAAC +
Preference number: 5 (lower is better)
Translates to: SRINASQIVQDVILRLWSVLQAL*QKLSNN
Trigger: GTTATTGGAGAGTTTTTGCAAGAGGGCCTGTAGTAC...AGACCACAGCCTTAGTATGACATCCTGCACAATTTGTGAAGCATTTATTCTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR CAA 90 bp CTATTGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTGTACTACAGGCCCTCTaGCAAAAACTCTCCAATAAC +
Preference number: 5 (lower is better)
Translates to: LLQRLQNVAQILKTADSIVLQAL*QKLSNN
Trigger: GTTATTGGAGAGTTTTTGCAAGAGGGCCTGTAGTAC...AATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCAATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CAA 90 bp TTCAGTACCAAGGAGACTTTATTGCTAGATCCAACTCACTGTTGTGCATTAAATGGCTGTGGTCTCCCCTaGACAGCTGACTTAAAATAT +
Preference number: 5 (lower is better)
Translates to: FSTKETLLLDPTHCCALNGCGLP*TADLKY
Trigger: ATATTTTAAGTCAGCTGTCAAGGGGAGACCACAGCC...ATTTAATGCACAACAGTGAGTTGGATCTAGCAATAAAGTCTCCTTGGTACTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CAA 90 bp TTGGAATGCTCCCCAGAACTTACAAGGCGGTTTTTAAAGTGTGATATTCCAATAGCTAGTCTTCCTAGTTaGTGCTTGCCTCCCAAATTA +
Preference number: 5 (lower is better)
Translates to: LECSPELTRRFLKCDIPIASLPS*CLPPKL
Trigger: TAATTTGGGAGGCAAGCACAAACTAGGAAGACTAGC...TATTGGAATATCACACTTTAAAAACCGCCTTGTAAGTTCTGGGGAGCATTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CAA 90 bp GCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTAAAGATAGATCCAACTCACTGTaGTGCATTAAATTTTGTCTC +
Preference number: 5 (lower is better)
Translates to: AMGHNCSAEKVSFHKAKDRSNSL*CIKFCL
Trigger: GAGACAAAATTTAATGCACAACAGTGAGTTGGATCT...ATCTTTAGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CAA 90 bp GATGTGTGCTCAGTCCAAGAGGGAGACACATTATTATTGATAATCAGTCTCACAACCAAGGAGACTTTATaGCTAGATCCAACTCACTGT +
Preference number: 5 (lower is better)
Translates to: DVCSVQEGDTLLLIISLTTKETL*LDPTHC
Trigger: ACAGTGAGTTGGATCTAGCAATAAAGTCTCCTTGGT...TGTGAGACTGATTATCAATAATAATGTGTCTCCCTCTTGGACTGAGCACACATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CAA 90 bp ACCAAGTTTTCAGCTGATAGGCGATTAGGGAGTTTTATTGTATTCCAATTAAGGAAGGTTCCTGGTGCTTaGAATAGAATGAGGGGGTTC +
Preference number: 5 (lower is better)
Translates to: TKFSADRRLGSFIVFQLRKVPGA*NRMRGF
Trigger: GAACCCCCTCATTCTATTCAAAGCACCAGGAACCTT...CCTTAATTGGAATACAATAAAACTCCCTAATCGCCTATCAGCTGAAAACTTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR CAA 90 bp AATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTAGTTTTCACAAGGCTATGCCTTTAACTTATTaGACTGTTTTGACTGATGGC +
Preference number: 5 (lower is better)
Translates to: NMAMGHNCSAEKVSFHKAMPLTY*TVLTDG
Trigger: GCCATCAGTCAAAACAGTCAAATAAGTTAAAGGCAT...AGCCTTGTGAAAACTAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR CAA 90 bp TTTGACCACATAAAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAAGTGTTGGAAGGTGCATaGATCTTCCTCCCTAATGAA +
Preference number: 5 (lower is better)
Translates to: FDHIKKLRAVVQSLLNYKVLEGA*IFLPNE
Trigger: TTCATTAGGGAGGAAGATCAATGCACCTTCCAACAC...TTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTTTATGTGGTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CAA 90 bp TTTGACCACATAAAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAAGTACTACAGGCCCTCTaGCAAAAACTCTCCAATAAC +
Preference number: 5 (lower is better)
Translates to: FDHIKKLRAVVQSLLNYKVLQAL*QKLSNN
Trigger: GTTATTGGAGAGTTTTTGCAAGAGGGCCTGTAGTAC...TTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTTTATGTGGTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CAA 90 bp ACAGAGCATTTAGCACTGATACTTAGCACCTGCTACTTTCATTATCTAGTTTTTAGGATTGATTCCTGCTaGGGCAAAACTCATCCAGAC +
Preference number: 5 (lower is better)
Translates to: TEHLALILSTCYFHYLVFRIDSC*GKTHPD
Trigger: GTCTGGATGAGTTTTGCCCAAGCAGGAATCAATCCT...AAAAACTAGATAATGAAAGTAGCAGGTGCTAAGTATCAGTGCTAAATGCTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CAA 90 bp GATGTGTGCTCAGTCCAAGAGGGAGACACATTATTATTGATAATCAGTCTCACAAAAGACTGCAGAATGTaGCCCAAATCCTTAAAACTG +
Preference number: 5 (lower is better)
Translates to: DVCSVQEGDTLLLIISLTKDCRM*PKSLKL
Trigger: CAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTT...TGTGAGACTGATTATCAATAATAATGTGTCTCCCTCTTGGACTGAGCACACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CAA 90 bp ATCACCACTATTATGAAAAACAATTTAAAGGCCGTTCAGCTCAGATGTGTGCTCAACCAATATACTGCTTaGGAATGCTCCCCAGAACTT +
Preference number: 5 (lower is better)
Translates to: ITTIMKNNLKAVQLRCVLNQYTA*ECSPEL
Trigger: AAGTTCTGGGGAGCATTCCAAAGCAGTATATTGGTT...GAGCACACATCTGAGCTGAACGGCCTTTAAATTGTTTTTCATAATAGTGGTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CAA 90 bp TTGGAATGCTCCCCAGAACTTACAAGGCGGTTTTTAAAGTGTGATATTCCAATAAGAGACTGTTCTGCTTaGTTTTCCACTATGCACTCA +
Preference number: 5 (lower is better)
Translates to: LECSPELTRRFLKCDIPIRDCSA*FSTMHS
Trigger: TGAGTGCATAGTGGAAAACAAAGCAGAACAGTCTCT...TATTGGAATATCACACTTTAAAAACCGCCTTGTAAGTTCTGGGGAGCATTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CAA 90 bp CTATTGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTAGAGACTGTTCTGCTTaGTTTTCCACTATGCACTCA +
Preference number: 5 (lower is better)
Translates to: LLQRLQNVAQILKTADSIRDCSA*FSTMHS
Trigger: TGAGTGCATAGTGGAAAACAAAGCAGAACAGTCTCT...AATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297146.7
ENST00000610164.1
CDS-3UTR CAA 90 bp GAATTTCTTCTCAAAATATGGCTATGGGCCACAATTGCTCAGCAGAGAAGGTTACATTTTCATCCTATCTaGCAGGAACATGTGAGTATG +
Preference number: 5 (lower is better)
Translates to: EFLLKIWLWATIAQQRRLHFHPI*QEHVSM
Trigger: CATACTCACATGTTCCTGCAAGATAGGATGAAAATG...TAACCTTCTCTGCTGAGCAATTGTGGCCCATAGCCATATTTTGAGAAGAAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR CAA 90 bp TGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTCTTGTTAGAGCCTGTTACATaGCAGCATAAGGCAAAAACA +
Preference number: 5 (lower is better)
Translates to: CKDCRMLPKSLKLLIPFLLEPVT*QHKAKT
Trigger: TGTTTTTGCCTTATGCTGCAATGTAACAGGCTCTAA...CAAGAATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR CAA 90 bp CTATTGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTTTTCTTCCACTTGTTTaGCCATCAGAATATGCGAAG +
Preference number: 5 (lower is better)
Translates to: LLQRLQNVAQILKTADSIFLPLV*PSEYAK
Trigger: CTTCGCATATTCTGATGGCAAAACAAGTGGAAGAAA...AATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCAATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CAA 90 bp TGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTCTTGCAGGTAGAACCATTTTaGACAGAGTTGAACACAAAT +
Preference number: 5 (lower is better)
Translates to: CKDCRMLPKSLKLLIPFLQVEPF*TELNTN
Trigger: ATTTGTGTTCAACTCTGTCAAAAATGGTTCTACCTG...CAAGAATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS-3UTR CAA 90 bp TGTGCCTTCAGTAGAATAAATGCTTCACAAATTGTGCAGGATGTCATACTAAGGAAAGACTGCAGAATGTaGCCCAAATCCTTAAAACTG +
Preference number: 5 (lower is better)
Translates to: CAFSRINASQIVQDVILRKDCRM*PKSLKL
Trigger: CAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTT...CCTTAGTATGACATCCTGCACAATTTGTGAAGCATTTATTCTACTGAAGGCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR CAA 90 bp TTGGAATGCTCCCCAGAACTTACAAGGCGGTTTTTAAAGTGTGATATTCCAATAAAAGACTGCAGAATGTaGCCCAAATCCTTAAAACTG +
Preference number: 5 (lower is better)
Translates to: LECSPELTRRFLKCDIPIKDCRM*PKSLKL
Trigger: CAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTT...TATTGGAATATCACACTTTAAAAACCGCCTTGTAAGTTCTGGGGAGCATTCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR CAA 90 bp CTATTGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTTGGTTACCATCTACCTaGATTAATGTCTTTAGCCAG +
Preference number: 5 (lower is better)
Translates to: LLQRLQNVAQILKTADSIWLPST*INVFSQ
Trigger: CTGGCTAAAGACATTAATCAAGGTAGATGGTAACCA...AATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR CAA 90 bp AGTAGAATAAATGCTTCACAAATTGTGCAGGATGTCATACTAAGGCTGTGGTCTCAGGTAGAACCATTTTaGACAGAGTTGAACACAAAT +
Preference number: 5 (lower is better)
Translates to: SRINASQIVQDVILRLWSQVEPF*TELNTN
Trigger: ATTTGTGTTCAACTCTGTCAAAAATGGTTCTACCTG...AGACCACAGCCTTAGTATGACATCCTGCACAATTTGTGAAGCATTTATTCTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR CAA 90 bp ACAGAGCATTTAGCACTGATACTTAGCACCTGCTACTTTCATTATCTAGTTTTTAACCAATATACTGCTTaGGAATGCTCCCCAGAACTT +
Preference number: 5 (lower is better)
Translates to: TEHLALILSTCYFHYLVFNQYTA*ECSPEL
Trigger: AAGTTCTGGGGAGCATTCCAAAGCAGTATATTGGTT...AAAAACTAGATAATGAAAGTAGCAGGTGCTAAGTATCAGTGCTAAATGCTCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
CDS-3UTR CAA 90 bp TTTGACCACATAAAGAAACTTAGGGCAGTGGTTCAGTCCCTTCTTAATTACAAAGGAGACACATTATTATaGATAATCAGTCTCACAGGG +
Preference number: 5 (lower is better)
Translates to: FDHIKKLRAVVQSLLNYKGDTLL*IISLTG
Trigger: CCCTGTGAGACTGATTATCAATAATAATGTGTCTCC...TTTGTAATTAAGAAGGGACTGAACCACTGCCCTAAGTTTCTTTATGTGGTCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CAA 90 bp CTATTGCAAAGACTGCAGAATGTTGCCCAAATCCTTAAAACTGCTGATTCCATTTCACTGTGGTCAATTTaGTGTTATTTAAATGGGGTC +
Preference number: 5 (lower is better)
Translates to: LLQRLQNVAQILKTADSISLWSI*CYLNGV
Trigger: GACCCCATTTAAATAACACAAAATTGACCACAGTGA...AATGGAATCAGCAGTTTTAAGGATTTGGGCAACATTCTGCAGTCTTTGCAATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CAA 90 bp ACCAAGGAGACTTTATTGCTAGATCCAACTCACTGTTGTGCATTAAATTTTGTCCAGGTAGAACCATTTTaGACAGAGTTGAACACAAAT +
Preference number: 5 (lower is better)
Translates to: TKETLLLDPTHCCALNFVQVEPF*TELNTN
Trigger: ATTTGTGTTCAACTCTGTCAAAAATGGTTCTACCTG...GACAAAATTTAATGCACAACAGTGAGTTGGATCTAGCAATAAAGTCTCCTTGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297146.7
CDS-3UTR CAA 90 bp AGATGCACACAAATAAGTCATTCCTTTGATTGCATTTTACCCACGCATTTTCATAAACTTCTCTCTACGTaGCTCCAATTCAAATATGCC +
Preference number: 5 (lower is better)
Translates to: RCTQISHSFDCILPTHFHKLLST*LQFKYA
Trigger: GGCATATTTGAATTGGAGCAACGTAGAGAGAAGTTT...ATGAAAATGCGTGGGTAAAATGCAATCAAAGGAATGACTTATTTGTGTGCATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS-3UTR CAA 90 bp AGATGCACACAAATAAGTCATTCCTTTGATTGCATTTTACCCACGCATTTTCATCAGGTAGAACCATTTTaGACAGAGTTGAACACAAAT +
Preference number: 5 (lower is better)
Translates to: RCTQISHSFDCILPTHFHQVEPF*TELNTN
Trigger: ATTTGTGTTCAACTCTGTCAAAAATGGTTCTACCTG...ATGAAAATGCGTGGGTAAAATGCAATCAAAGGAATGACTTATTTGTGTGCATCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610164.1
CDS GCA 72 bp CGGCGGCGGCTGCGGTGGCGAGGGCGGCGGCGGGGCTaGTTCAGCCTCTGTGGAACCAGCAGGAACCCCTAC +
Preference number: 6 (lower is better)
Translates to: RRRLRWRGRRRG*FSLCGTSRNPY
Trigger: GTAGGGGTTCCTGCTGGTTCCACAGAGGCTGAAGCAGCCCCGCCGCCGCCCTCGCCACCGCAGCCGCCGCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424100.2
CDS CAA 90 bp GAGCATCCAGGCAGGGCTCGGCGGCGCCTGCGCGCTGGAGCCTCCTaGAGCTCCAGCCGCGTCCTCCCCTGTCGCAGCGGCACCGTCTCC +
Preference number: 6 (lower is better)
Translates to: EHPGRARRRLRAGAS*SSSRVLPCRSGTVS
Trigger: GGAGACGGTGCCGCTGCGACAGGGGAGGACGCGGCTGGAGCTCAAGGAGGCTCCAGCGCGCAGGCGCCGCCGAGCCCTGCCTGGATGCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424100.2
CDS TCA 72 bp GCTTCAGCCTCTGTGGAACCAGCAGGAACCCCTACCTaGCTCCAGAGCTGGCTGGGTTTATTGACTGCCCTG +
Preference number: 6 (lower is better)
Translates to: ASASVEPAGTPT*LQSWLGLLTAL
Trigger: CAGGGCAGTCAATAAACCCAGCCAGCTCTGGAGTCAGGTAGGGGTTCCTGCTGGTTCCACAGAGGCTGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424100.2
CDS TCA 72 bp ATAGCCTTCTTCTGCCTGTGGTGTTTGCATTTTGCCTaGTGCCCAGCAAGGTGGGTGGTGTGGGACCCCTTC +
Preference number: 6 (lower is better)
Translates to: IAFFCLWCLHFA*CPARWVVWDPF
Trigger: GAAGGGGTCCCACACCACCCACCTTGCTGGGCATCAGGCAAAATGCAAACACCACAGGCAGAAGAAGGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000449591.2
ENST00000610164.1
CDS GCA 72 bp CAGAATATGCGAAGATGGGGAGAGAGATTGCTTCTGTaGTGCAAAGGAACCGTTCCCGGTGATTCGCAGTCT +
Preference number: 6 (lower is better)
Translates to: QNMRRWGERLLL*CKGTVPGDSQS
Trigger: AGACTGCGAATCACCGGGAACGGTTCCTTTGCAGCACAGAAGCAATCTCTCTCCCCATCTTCGCATATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000438062.5
ENST00000449591.2
ENST00000487573.1
ENST00000610164.1
CDS GCA 72 bp TTTGCCATCAGAATATGCGAAGATGGGGAGAGAGATTaGTTCTGTGCTGCAAAGGAACCGTTCCCGGTGATT +
Preference number: 6 (lower is better)
Translates to: FAIRICEDGERD*FCAAKEPFPVI
Trigger: AATCACCGGGAACGGTTCCTTTGCAGCACAGAAGCAATCTCTCTCCCCATCTTCGCATATTCTGATGGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000438062.5
ENST00000449591.2
ENST00000487573.1
ENST00000610164.1
CDS CAA 72 bp TTTTGCCATCAGAATATGCGAAGATGGGGAGAGAGATaGCTTCTGTGCTGCAAAGGAACCGTTCCCGGTGAT +
Preference number: 6 (lower is better)
Translates to: FCHQNMRRWGER*LLCCKGTVPGD
Trigger: ATCACCGGGAACGGTTCCTTTGCAGCACAGAAGCAATCTCTCTCCCCATCTTCGCATATTCTGATGGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000438062.5
ENST00000449591.2
ENST00000487573.1
ENST00000610164.1
CDS CCA 72 bp TCGGATGATACCACAGACACCACAAAGCCTGACACGTaGGTGCTTAGGAATGCCTCTAGAATCATGCATTTT +
Preference number: 6 (lower is better)
Translates to: SDDTTDTTKPDT*VLRNASRIMHF
Trigger: AAAATGCATGATTCTAGAGGCATTCCTAAGCACCCACGTGTCAGGCTTTGTGGTGTCTGTGGTATCATCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297146.7
ENST00000487573.1
CDS CAA 90 bp CTATGCAAGGTCTTATCTTTCACTAGCAAAATGGAGATCAGGAGGTaGCCCACCACGCTGACTCCTATTATGAAACCCAAGGAAGTCAGT +
Preference number: 6 (lower is better)
Translates to: LCKVLSFTSKMEIRR*PTTLTPIMKPKEVS
Trigger: ACTGACTTCCTTGGGTTTCATAATAGGAGTCAGCGTGGTGGGCAACCTCCTGATCTCCATTTTGCTAGTGAAAGATAAGACCTTGCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000438062.5
ENST00000449591.2
ENST00000449735.1
ENST00000610164.1
CDS CCA 72 bp AATGTTGTCAGCTGCATGGCTATAGTTCGCCATAGATaGATGGAGGATAAGGATACAGCCTCAGTCAAGTCT +
Preference number: 6 (lower is better)
Translates to: NVVSCMAIVRHR*MEDKDTASVKS
Trigger: AGACTTGACTGAGGCTGTATCCTTATCCTCCATCCATCTATGGCGAACTATAGCCATGCAGCTGACAACATT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000438062.5
ENST00000449591.2
ENST00000449735.1
ENST00000610164.1
CDS GCA 72 bp ATGATACCACAGACACCACAAAGCCTGACACGTGGGTaGTTAGGAATGCCTCTAGAATCATGCATTTTCTTA +
Preference number: 6 (lower is better)
Translates to: MIPQTPQSLTRG*LGMPLESCIFL
Trigger: TAAGAAAATGCATGATTCTAGAGGCATTCCTAAGCACCCACGTGTCAGGCTTTGTGGTGTCTGTGGTATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297146.7
ENST00000487573.1
CDS CAA 72 bp ATCTGCAGTCATGCTTCCTCTTTTCTTCCACTTGTTTaGCCATCAGAATATGCGAAGATGGGGAGAGAGATT +
Preference number: 6 (lower is better)
Translates to: ICSHASSFLPLV*PSEYAKMGREI
Trigger: AATCTCTCTCCCCATCTTCGCATATTCTGATGGCAAAACAAGTGGAAGAAAAGAGGAAGCATGACTGCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297146.7
ENST00000424100.2
ENST00000438062.5
ENST00000449591.2
ENST00000487573.1
ENST00000610164.1
CDS CAA 72 bp ATCTGCAGTCATGCTTCCTCTTTTCTTCCACTTGTTTaGCCATCAGAATATCTGTTGGTGTTGGATATCCCG +
Preference number: 6 (lower is better)
Translates to: ICSHASSFLPLV*PSEYLLVLDIP
Trigger: CGGGATATCCAACACCAACAGATATTCTGATGGCAAAACAAGTGGAAGAAAAGAGGAAGCATGACTGCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449735.1
CDS CAA 90 bp GGCTTTCCAGAAATGGAGCTCTCAGTAAGCCCTACTGAAGATGCATaGTCTGAATGTACTTCCATTATGCAGTTTATTGTCACAAAACAC +
Preference number: 6 (lower is better)
Translates to: GFPEMELSVSPTEDA*SECTSIMQFIVTKH
Trigger: GTGTTTTGTGACAATAAACTGCATAATGGAAGTACATTCAGACAATGCATCTTCAGTAGGGCTTACTGAGAGCTCCATTTCTGGAAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449591.2
CDS CAA 72 bp GAAATGGAGCTCTCAGTAAGCCCTACTGAAGATGCATaGTCTGAATGTACTTCCATTATGCAGTTTATTGTC +
Preference number: 6 (lower is better)
Translates to: EMELSVSPTEDA*SECTSIMQFIV
Trigger: GACAATAAACTGCATAATGGAAGTACATTCAGACAATGCATCTTCAGTAGGGCTTACTGAGAGCTCCATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449591.2