RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPR83 (Homo sapiens)

Ensembl gene IDs: ENSG00000123901

Ensembl transcript IDs: ENST00000243673.7, ENST00000539203.2

Found 286 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAGGGCTGTAAGGCAGCAGCTGCCCCACAGATGGAGGCAGTTGAATaGTTCAGCCCCCATCTGGGCCAACGTTGTCCTCGCTCCTCTTCC +
Preference number: 1 (lower is better)
Translates to: KGCKAAAAPQMEAVE*FSPHLGQRCPRSSS
Trigger: GGAAGAGGAGCGAGGACAACGTTGGCCCAGATGGGGGCTGAATCATTCAACTGCCTCCATCTGTGGGGCAGCTGCTGCCTTACAGCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
3UTR CCA 90 bp CAGCTGCCCCACAGATGGAGGCAGTTGAATGATTCAGCCCCCATCTaGGCCAACGTTGTCCTCGCTCCTCTTCCTCAGAGATACAGGCTG +
Preference number: 1 (lower is better)
Translates to: QLPHRWRQLNDSAPI*ANVVLAPLPQRYRL
Trigger: CAGCCTGTATCTCTGAGGAAGAGGAGCGAGGACAACGTTGGCCCAGATGGGGGCTGAATCATTCAACTGCCTCCATCTGTGGGGCAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
3UTR GCA 90 bp GCCAGGCCCTTCCCACCACTGTCTACAATAGGGGGCAGTTCTGTCTaGGTGGTGACAGGCTTCACCTTGGGATCTTCTCACCTCTTCTTC +
Preference number: 1 (lower is better)
Translates to: ARPFPPLSTIGGSSV*VVTGFTLGSSHLFF
Trigger: GAAGAAGAGGTGAGAAGATCCCAAGGTGAAGCCTGTCACCACGCAGACAGAACTGCCCCCTATTGTAGACAGTGGTGGGAAGGGCCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR TCA 90 bp TTGATTCCCTGGTTCATCTTGAGGCTGCCTCTAAGGAGGGGCATGTaGGCCAGGCCCTTCCCACCACTGTCTACAATAGGGGGCAGTTCT +
Preference number: 1 (lower is better)
Translates to: LIPWFILRLPLRRGM*ARPFPPLSTIGGSS
Trigger: AGAACTGCCCCCTATTGTAGACAGTGGTGGGAAGGGCCTGGCTCACATGCCCCTCCTTAGAGGCAGCCTCAAGATGAACCAGGGAATCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR TCA 90 bp ATTCAAGAGTCCTACAGCTTCTGCAGGAGTGTGTTTCCAGCACTCTaGAGATCATGTGTGAGAATAGGCTCTCTTTCCCTGCCTCAGGTG +
Preference number: 1 (lower is better)
Translates to: IQESYSFCRSVFPAL*RSCVRIGSLSLPQV
Trigger: CACCTGAGGCAGGGAAAGAGAGCCTATTCTCACACATGATCTTCAGAGTGCTGGAAACACACTCCTGCAGAAGCTGTAGGACTCTTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
3UTR TCA 90 bp ACACACCACAGAGACAATAAGTACAGGCACATGAGCCATTTGTCCTaGAAAATCCATCTGGGGATCCCTGTGGGCTTAGAAGACTCTGTC +
Preference number: 1 (lower is better)
Translates to: THHRDNKYRHMSHLS*KIHLGIPVGLEDSV
Trigger: GACAGAGTCTTCTAAGCCCACAGGGATCCCCAGATGGATTTTTCAGGACAAATGGCTCATGTGCCTGTACTTATTGTCTCTGTGGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR GCA 90 bp ATCCTCCATGCTTCCCAGAGCAGGACAAACCTTCTGTATGCCTGCTaGCTTGTCTCATTCTGGTTCACAGAATTTCTATGGCAGCTTTCA +
Preference number: 1 (lower is better)
Translates to: ILHASQSRTNLLYAC*LVSFWFTEFLWQLS
Trigger: TGAAAGCTGCCATAGAAATTCTGTGAACCAGAATGAGACAAGGCAGCAGGCATACAGAAGGTTTGTCCTGCTCTGGGAAGCATGGAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR GCA 90 bp AACATCCTCCATGCTTCCCAGAGCAGGACAAACCTTCTGTATGCCTaGTGCCTTGTCTCATTCTGGTTCACAGAATTTCTATGGCAGCTT +
Preference number: 1 (lower is better)
Translates to: NILHASQSRTNLLYA*CLVSFWFTEFLWQL
Trigger: AAGCTGCCATAGAAATTCTGTGAACCAGAATGAGACAAGGCAGCAGGCATACAGAAGGTTTGTCCTGCTCTGGGAAGCATGGAGGATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR GCA 90 bp GTACAACATCCTCCATGCTTCCCAGAGCAGGACAAACCTTCTGTATaGCTGCTGCCTTGTCTCATTCTGGTTCACAGAATTTCTATGGCA +
Preference number: 1 (lower is better)
Translates to: VQHPPCFPEQDKPSV*LLPCLILVHRISMA
Trigger: TGCCATAGAAATTCTGTGAACCAGAATGAGACAAGGCAGCAGGCATACAGAAGGTTTGTCCTGCTCTGGGAAGCATGGAGGATGTTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR CCA 90 bp AGGCTTCACCTTGGGATCTTCTCACCTCTTCTTCAACTCTTCTGGTaGACACCCCTGGGAAAGGTACCCCTGTTTCTGTTAATCATTACA +
Preference number: 1 (lower is better)
Translates to: RLHLGIFSPLLQLFW*TPLGKVPLFLLIIT
Trigger: TGTAATGATTAACAGAAACAGGGGTACCTTTCCCAGGGGTGTCCACCAGAAGAGTTGAAGAAGAGGTGAGAAGATCCCAAGGTGAAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR TCA 90 bp TTAAGCTCGATTCTGCCTGACAGGTCTCTTTTCTGGGTGACACAGTaGGTCACTCAGGACCAGACAGAAGGTGATAAAAACAATCAGTCC +
Preference number: 1 (lower is better)
Translates to: LSSILPDRSLFWVTQ*VTQDQTEGDKNNQS
Trigger: GGACTGATTGTTTTTATCACCTTCTGTCTGGTCCTGAGTGACTCACTGTGTCACCCAGAAAAGAGACCTGTCAGGCAGAATCGAGCTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR CCA 90 bp CAGAGCAGGACAAACCTTCTGTATGCCTGCTGCCTTGTCTCATTCTaGTTCACAGAATTTCTATGGCAGCTTTCAGATGAAACCATTAGC +
Preference number: 1 (lower is better)
Translates to: QSRTNLLYACCLVSF*FTEFLWQLSDETIS
Trigger: GCTAATGGTTTCATCTGAAAGCTGCCATAGAAATTCTGTGAACCAGAATGAGACAAGGCAGCAGGCATACAGAAGGTTTGTCCTGCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR CCA 90 bp CTGTATGCCTGCTGCCTTGTCTCATTCTGGTTCACAGAATTTCTATaGCAGCTTTCAGATGAAACCATTAGCTACTTCTTGACACACCAC +
Preference number: 1 (lower is better)
Translates to: LYACCLVSFWFTEFL*QLSDETISYFLTHH
Trigger: GTGGTGTGTCAAGAAGTAGCTAATGGTTTCATCTGAAAGCTGCCATAGAAATTCTGTGAACCAGAATGAGACAAGGCAGCAGGCATACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR TCA 90 bp ACAATTACTTCCAGCATATTGGAAAGCCTGCTCCCTCATCTCTTGTaGAAACAGAACAATGTTTCACCACCACTTGTTTTTGTGCAATTG +
Preference number: 1 (lower is better)
Translates to: TITSSILESLLPHLL*KQNNVSPPLVFVQL
Trigger: CAATTGCACAAAAACAAGTGGTGGTGAAACATTGTTCTGTTTTCACAAGAGATGAGGGAGCAGGCTTTCCAATATGCTGGAAGTAATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR CCA 90 bp AGAGCATTTAAGGTAGGCTTGGCTAAGCTACGATGTTCAGTAGGTTaGGTGTATTCAATGCATTTTCAACTTCCAATATTTTGGACTTAC +
Preference number: 1 (lower is better)
Translates to: RAFKVGLAKLRCSVG*VYSMHFQLPIFWTY
Trigger: GTAAGTCCAAAATATTGGAAGTTGAAAATGCATTGAATACACCCAACCTACTGAACATCGTAGCTTAGCCAAGCCTACCTTAAATGCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR-3UTR CCA 90 bp CTGGATATTGCTAGGCCACTGAAGACTTATGATTCATCATGGCCCAGTGACTCCCCCGCTCTGGCTTGCTaGCATTTCCCTGGCCCGTGT +
Preference number: 2 (lower is better)
Translates to: LDIARPLKTYDSSWPSDSPALAC*HFPGPC
Trigger: ACACGGGCCAGGGAAATGCCAGCAAGCCAGAGCGGG...GGAGTCACTGGGCCATGATGAATCATAAGTCTTCAGTGGCCTAGCAATATCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
3UTR CAA 90 bp TCTACAATAGGGGGCAGTTCTGTCTGCGTGGTGACAGGCTTCACCTaGGGATCTTCTCACCTCTTCTTCAACTCTTCTGGTGGACACCCC +
Preference number: 2 (lower is better)
Translates to: STIGGSSVCVVTGFT*GSSHLFFNSSGGHP
Trigger: GGGGTGTCCACCAGAAGAGTTGAAGAAGAGGTGAGAAGATCCCAAGGTGAAGCCTGTCACCACGCAGACAGAACTGCCCCCTATTGTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR-3UTR GCA 90 bp AAAGTGAGGCATAAAAATCTCCACGCCCGCTCTGGCTTGCTGGCATTTCCCTGGCTCAGAGATACAGGCTaGTGTGCCTCCCAGTGTTTC +
Preference number: 2 (lower is better)
Translates to: KVRHKNLHARSGLLAFPWLRDTG*CASQCF
Trigger: GAAACACTGGGAGGCACAGCAGCCTGTATCTCTGAG...CCAGGGAAATGCCAGCAAGCCAGAGCGGGCGTGGAGATTTTTATGCCTCACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
3UTR-3UTR CCA 90 bp CTGGATATTGCTAGGCCACTGAAGACTTATGATTCATCATGGCCCAGTGACTCCTCTCCACGCCCGCTCTaGCTTGCTGGCATTTCCCTG +
Preference number: 2 (lower is better)
Translates to: LDIARPLKTYDSSWPSDSSPRPL*LAGISL
Trigger: CAGGGAAATGCCAGCAAGCCAGAGCGGGCGTGGAGA...GGAGTCACTGGGCCATGATGAATCATAAGTCTTCAGTGGCCTAGCAATATCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
3UTR-3UTR CCA 90 bp AAAGTGAGGCATAAAAATCTCCACGCCCGCTCTGGCTTGCTGGCATTTCCCTGGAGAGCTCTGTGCATCTaGGTCACCACACCCAAAGTA +
Preference number: 2 (lower is better)
Translates to: KVRHKNLHARSGLLAFPWRALCI*VTTPKV
Trigger: TACTTTGGGTGTGGTGACCCAGATGCACAGAGCTCT...CCAGGGAAATGCCAGCAAGCCAGAGCGGGCGTGGAGATTTTTATGCCTCACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
3UTR-3UTR TCA 90 bp TCAACTCTTCTGGTGGACACCCCTGGGAAAGGTACCCCTGTTTCTGTTAATCATATGGAGGCAGTTGAATaGTTCAGCCCCCATCTGGGC +
Preference number: 2 (lower is better)
Translates to: STLLVDTPGKGTPVSVNHMEAVE*FSPHLG
Trigger: GCCCAGATGGGGGCTGAATCATTCAACTGCCTCCAT...ATGATTAACAGAAACAGGGGTACCTTTCCCAGGGGTGTCCACCAGAAGAGTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR-3UTR TCA 90 bp AAAGTGAGGCATAAAAATCTCCACGCCCGCTCTGGCTTGCTGGCATTTCCCTGGACCACACCCAAAGTATaGTTTAGGTCTCCCTTAGGG +
Preference number: 2 (lower is better)
Translates to: KVRHKNLHARSGLLAFPWTTPKV*FRSPLG
Trigger: CCCTAAGGGAGACCTAAATCATACTTTGGGTGTGGT...CCAGGGAAATGCCAGCAAGCCAGAGCGGGCGTGGAGATTTTTATGCCTCACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
3UTR-3UTR GCA 90 bp CAGCAGCTGCCCCACAGATGGAGGCAGTTGAATGATTCAGCCCCCATCTGGGCCATGTCTAGTTGGTGGTaGCTTTTAGTTTTCACATCA +
Preference number: 2 (lower is better)
Translates to: QQLPHRWRQLNDSAPIWAMSSWW*LLVFTS
Trigger: TGATGTGAAAACTAAAAGGCACCACCAACTAGACAT...GGCCCAGATGGGGGCTGAATCATTCAACTGCCTCCATCTGTGGGGCAGCTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
3UTR CAA 90 bp TTTGTGCAATTGCAGGAGAGAAGGAATCATGCCTCCTGGTTGAGTTaGATTCCCTGGTTCATCTTGAGGCTGCCTCTAAGGAGGGGCATG +
Preference number: 2 (lower is better)
Translates to: FVQLQERRNHASWLS*IPWFILRLPLRRGM
Trigger: CATGCCCCTCCTTAGAGGCAGCCTCAAGATGAACCAGGGAATCAAACTCAACCAGGAGGCATGATTCCTTCTCTCCTGCAATTGCACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR-3UTR GCA 90 bp GGCTTGGCTAAGCTACGATGTTCAGTAGGTTGGGTGTATTCAATGCATTTTCAAGGGGGCAGTTCTGTCTaGGTGGTGACAGGCTTCACC +
Preference number: 2 (lower is better)
Translates to: GLAKLRCSVGWVYSMHFQGGSSV*VVTGFT
Trigger: GGTGAAGCCTGTCACCACGCAGACAGAACTGCCCCC...TTGAAAATGCATTGAATACACCCAACCTACTGAACATCGTAGCTTAGCCAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR-3UTR CCA 90 bp GAGGTGTCTAAGCACAATTACTTCCAGCATATTGGAAAGCCTGCTCCCTCATCTTCTGGTGGACACCCCTaGGAAAGGTACCCCTGTTTC +
Preference number: 2 (lower is better)
Translates to: EVSKHNYFQHIGKPAPSSSGGHP*ERYPCF
Trigger: GAAACAGGGGTACCTTTCCCAGGGGTGTCCACCAGA...AGATGAGGGAGCAGGCTTTCCAATATGCTGGAAGTAATTGTGCTTAGACACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR-3UTR TCA 90 bp TGTCTAAGCACAATTACTTCCAGCATATTGGAAAGCCTGCTCCCTCATCTCTTGGTTCTGTCTGCGTGGTaGCAGGCTTCACCTTGGGAT +
Preference number: 2 (lower is better)
Translates to: CLSTITSSILESLLPHLLVLSAW*QASPWD
Trigger: ATCCCAAGGTGAAGCCTGTCACCACGCAGACAGAAC...CAAGAGATGAGGGAGCAGGCTTTCCAATATGCTGGAAGTAATTGTGCTTAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR-3UTR CCA 90 bp CAGTTGAATGATTCAGCCCCCATCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTGAACACATGTCTAGTTaGTGGTGCCTTTTAGTTTTC +
Preference number: 2 (lower is better)
Translates to: QLNDSAPIWANVVLAPLPEHMSS*WCLLVF
Trigger: GAAAACTAAAAGGCACCACCAACTAGACATGTGTTC...AGGAAGAGGAGCGAGGACAACGTTGGCCCAGATGGGGGCTGAATCATTCAACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
3UTR-3UTR CCA 90 bp GGCTTGGCTAAGCTACGATGTTCAGTAGGTTGGGTGTATTCAATGCATTTTCAAGATTCAGCCCCCATCTaGGCCAACGTTGTCCTCGCT +
Preference number: 2 (lower is better)
Translates to: GLAKLRCSVGWVYSMHFQDSAPI*ANVVLA
Trigger: AGCGAGGACAACGTTGGCCCAGATGGGGGCTGAATC...TTGAAAATGCATTGAATACACCCAACCTACTGAACATCGTAGCTTAGCCAAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR CAA 90 bp CTTGTTTTTGTGCAATTGCAGGAGAGAAGGAATCATGCCTCCTGGTaGAGTTTGATTCCCTGGTTCATCTTGAGGCTGCCTCTAAGGAGG +
Preference number: 2 (lower is better)
Translates to: LVFVQLQERRNHASW*SLIPWFILRLPLRR
Trigger: CCTCCTTAGAGGCAGCCTCAAGATGAACCAGGGAATCAAACTCAACCAGGAGGCATGATTCCTTCTCTCCTGCAATTGCACAAAAACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR CAA 90 bp TCCATGCTTCCCAGAGCAGGACAAACCTTCTGTATGCCTGCTGCCTaGTCTCATTCTGGTTCACAGAATTTCTATGGCAGCTTTCAGATG +
Preference number: 2 (lower is better)
Translates to: SMLPRAGQTFCMPAA*SHSGSQNFYGSFQM
Trigger: CATCTGAAAGCTGCCATAGAAATTCTGTGAACCAGAATGAGACAAGGCAGCAGGCATACAGAAGGTTTGTCCTGCTCTGGGAAGCATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR-3UTR TCA 90 bp GAGGTGTCTAAGCACAATTACTTCCAGCATATTGGAAAGCCTGCTCCCTCATCTACAGATGGAGGCAGTTaGATGATTCAGCCCCCATCT +
Preference number: 2 (lower is better)
Translates to: EVSKHNYFQHIGKPAPSSTDGGS*MIQPPS
Trigger: AGATGGGGGCTGAATCATTCAACTGCCTCCATCTGT...AGATGAGGGAGCAGGCTTTCCAATATGCTGGAAGTAATTGTGCTTAGACACCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR-3UTR CCA 90 bp GATTCAGCCCCCATCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTCAGAGATACCCAGTGTTTCTTAGATaGGAATTTATGAACACATGT +
Preference number: 2 (lower is better)
Translates to: DSAPIWANVVLAPLPQRYPVFLR*EFMNTC
Trigger: ACATGTGTTCATAAATTCCCATCTAAGAAACACTGG...GTATCTCTGAGGAAGAGGAGCGAGGACAACGTTGGCCCAGATGGGGGCTGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
3UTR-3UTR CCA 90 bp TTCAGCCCCCATCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTCAGAGATACAGCCAGTGTTTCTTAGATaGGAATTTATGAACACATGT +
Preference number: 2 (lower is better)
Translates to: FSPHLGQRCPRSSSSEIQPVFLR*EFMNTC
Trigger: ACATGTGTTCATAAATTCCCATCTAAGAAACACTGG...CTGTATCTCTGAGGAAGAGGAGCGAGGACAACGTTGGCCCAGATGGGGGCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
3UTR-3UTR CCA 90 bp CTTCTGTATGCCTGCTGCCTTGTCTCATTCTGGTTCACAGAATTTCTATGGCAGCTTCAACTCTTCTGGTaGACACCCCTGGGAAAGGTA +
Preference number: 2 (lower is better)
Translates to: LLYACCLVSFWFTEFLWQLQLFW*TPLGKV
Trigger: TACCTTTCCCAGGGGTGTCCACCAGAAGAGTTGAAG...CTGCCATAGAAATTCTGTGAACCAGAATGAGACAAGGCAGCAGGCATACAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR-3UTR TCA 90 bp AGCTTCTGTATTCCTAGACACCCTCAGAGAGGAGTGAAGTACAACATCCTCCATACTCTGTCTGCCCAATaGAAGTCATGGTTTTGCCCA +
Preference number: 2 (lower is better)
Translates to: SFCIPRHPQRGVKYNILHTLSAQ*KSWFCP
Trigger: TGGGCAAAACCATGACTTTCATTGGGCAGACAGAGT...ATGGAGGATGTTGTACTTCACTCCTCTCTGAGGGTGTCTAGGAATACAGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR-3UTR GCA 90 bp TTAGTTTTCACATCACATGGGGCTAGGAGGCTGGACAGTTTCCTAGGAATTCAAGAGTCCTACAGCTTCTaGAGGAGTGTGTTTCCAGCA +
Preference number: 2 (lower is better)
Translates to: LVFTSHGARRLDSFLGIQESYSF*RSVFPA
Trigger: TGCTGGAAACACACTCCTGCAGAAGCTGTAGGACTC...TTGAATTCCTAGGAAACTGTCCAGCCTCCTAGCCCCATGTGATGTGAAAACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
3UTR-3UTR TCA 90 bp TGTATGCCTGCTGCCTTGTCTCATTCTGGTTCACAGAATTTCTATGGCAGCTTTGCCAAGAGGTCTAAGTaGCAAACTCTTTCTCCCTCA +
Preference number: 2 (lower is better)
Translates to: CMPAALSHSGSQNFYGSFAKRSK*QTLSPS
Trigger: TGAGGGAGAAAGAGTTTGTCACTTAGACCTCTTGGC...AAAGCTGCCATAGAAATTCTGTGAACCAGAATGAGACAAGGCAGCAGGCATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR-3UTR CCA 90 bp ATGGGAATTTATGAACACATGTCTAGTTGGTGGTGCCTTTTAGTTTTCACATCATTTCCCTGCCTCAGGTaGAGACAGACCCCTCCCACT +
Preference number: 2 (lower is better)
Translates to: MGIYEHMSSWWCLLVFTSFPCLR*RQTPPT
Trigger: AGTGGGAGGGGTCTGTCTCCACCTGAGGCAGGGAAA...TGATGTGAAAACTAAAAGGCACCACCAACTAGACATGTGTTCATAAATTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
3UTR CAA 90 bp TGCTCCCTCATCTCTTGTGAAAACAGAACAATGTTTCACCACCACTaGTTTTTGTGCAATTGCAGGAGAGAAGGAATCATGCCTCCTGGT +
Preference number: 2 (lower is better)
Translates to: CSLISCENRTMFHHH*FLCNCRREGIMPPG
Trigger: ACCAGGAGGCATGATTCCTTCTCTCCTGCAATTGCACAAAAACAAGTGGTGGTGAAACATTGTTCTGTTTTCACAAGAGATGAGGGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR-3UTR GCA 90 bp GGCTTGGCTAAGCTACGATGTTCAGTAGGTTGGGTGTATTCAATGCATTTTCAACTTCTGTATGCCTGCTaGCTTGTCTCATTCTGGTTC +
Preference number: 2 (lower is better)
Translates to: GLAKLRCSVGWVYSMHFQLLYAC*LVSFWF
Trigger: GAACCAGAATGAGACAAGGCAGCAGGCATACAGAAG...TTGAAAATGCATTGAATACACCCAACCTACTGAACATCGTAGCTTAGCCAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR-3UTR CCA 90 bp TTGCAGGAGAGAAGGAATCATGCCTCCTGGTTGAGTTTGATTCCCTGGTTCATCCACATGTCTAGTTGGTaGTGCCTTTTAGTTTTCACA +
Preference number: 2 (lower is better)
Translates to: LQERRNHASWLSLIPWFIHMSSW*CLLVFT
Trigger: TGTGAAAACTAAAAGGCACCACCAACTAGACATGTG...GATGAACCAGGGAATCAAACTCAACCAGGAGGCATGATTCCTTCTCTCCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR-3UTR TCA 90 bp TTAGTTTTCACATCACATGGGGCTAGGAGGCTGGACAGTTTCCTAGGAATTCAAGTGTTTCCAGCACTCTaGAGATCATGTGTGAGAATA +
Preference number: 2 (lower is better)
Translates to: LVFTSHGARRLDSFLGIQVFPAL*RSCVRI
Trigger: TATTCTCACACATGATCTTCAGAGTGCTGGAAACAC...TTGAATTCCTAGGAAACTGTCCAGCCTCCTAGCCCCATGTGATGTGAAAACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
3UTR-3UTR TCA 90 bp TGTATGCCTGCTGCCTTGTCTCATTCTGGTTCACAGAATTTCTATGGCAGCTTTTTACAGGGAAGCAGATaGTGTGAGCAAGTTCAGTTT +
Preference number: 2 (lower is better)
Translates to: CMPAALSHSGSQNFYGSFLQGSR*CEQVQF
Trigger: AAACTGAACTTGCTCACATCATCTGCTTCCCTGTAA...AAAGCTGCCATAGAAATTCTGTGAACCAGAATGAGACAAGGCAGCAGGCATACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR CAA 90 bp AAGGTCATGCACACATGCACACAATCACACACACGAAGGAAAATGTaGCAAATAGAGCCACAGCATGTTCACAGATGTTATCACAAATGG +
Preference number: 2 (lower is better)
Translates to: KVMHTCTQSHTRRKM*QIEPQHVHRCYHKW
Trigger: CCATTTGTGATAACATCTGTGAACATGCTGTGGCTCTATTTGCAACATTTTCCTTCGTGTGTGTGATTGTGTGCATGTGTGCATGACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR-3UTR TCA 90 bp TGTATGCCTGCTGCCTTGTCTCATTCTGGTTCACAGAATTTCTATGGCAGCTTTAGTGAAAGTTACACCTaGACCACCAAAATGATGTTG +
Preference number: 2 (lower is better)
Translates to: CMPAALSHSGSQNFYGSFSESYT*TTKMML
Trigger: CAACATCATTTTGGTGGTTCAGGTGTAACTTTCACT...AAAGCTGCCATAGAAATTCTGTGAACCAGAATGAGACAAGGCAGCAGGCATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR-3UTR CCA 90 bp AGCTTCTGTATTCCTAGACACCCTCAGAGAGGAGTGAAGTACAACATCCTCCATTTCACAGAATTTCTATaGCAGCTTTCAGATGAAACC +
Preference number: 2 (lower is better)
Translates to: SFCIPRHPQRGVKYNILHFTEFL*QLSDET
Trigger: GGTTTCATCTGAAAGCTGCCATAGAAATTCTGTGAA...ATGGAGGATGTTGTACTTCACTCCTCTCTGAGGGTGTCTAGGAATACAGAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR-3UTR TCA 90 bp GGCTTGGCTAAGCTACGATGTTCAGTAGGTTGGGTGTATTCAATGCATTTTCAACTCATATCCATGCTTTaGTTTCAGAGTTTATCTGGT +
Preference number: 2 (lower is better)
Translates to: GLAKLRCSVGWVYSMHFQLISML*FQSLSG
Trigger: ACCAGATAAACTCTGAAATCAAAGCATGGATATGAG...TTGAAAATGCATTGAATACACCCAACCTACTGAACATCGTAGCTTAGCCAAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR CAA 90 bp CAATGCATTTTCAACTTCCAATATTTTGGACTTACGATGGGTTTATaGAGATGTAAGTCAAGGAGCTTCTGTATTCCTAGACACCCTCAG +
Preference number: 2 (lower is better)
Translates to: QCIFNFQYFGLTMGL*RCKSRSFCIPRHPQ
Trigger: CTGAGGGTGTCTAGGAATACAGAAGCTCCTTGACTTACATCTCAATAAACCCATCGTAAGTCCAAAATATTGGAAGTTGAAAATGCATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR TCA 72 bp AAGGCAGCAGCTGCCCCACAGATGGAGGCAGTTGAATaGTTCAGCCCCCATCTGGGCCAACGTTGTCCTCGC +
Preference number: 3 (lower is better)
Translates to: KAAAAPQMEAVE*FSPHLGQRCPR
Trigger: GCGAGGACAACGTTGGCCCAGATGGGGGCTGAATCATTCAACTGCCTCCATCTGTGGGGCAGCTGCTGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
3UTR CCA 72 bp CACAGATGGAGGCAGTTGAATGATTCAGCCCCCATCTaGGCCAACGTTGTCCTCGCTCCTCTTCCTCAGAGA +
Preference number: 3 (lower is better)
Translates to: HRWRQLNDSAPI*ANVVLAPLPQR
Trigger: TCTCTGAGGAAGAGGAGCGAGGACAACGTTGGCCCAGATGGGGGCTGAATCATTCAACTGCCTCCATCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
3UTR TCA 72 bp AGAGCTCTGTGCATCTGGGTCACCACACCCAAAGTATaGTTTAGGTCTCCCTTAGGGATGCTCAGCAGTAGG +
Preference number: 3 (lower is better)
Translates to: RALCIWVTTPKV*FRSPLGMLSSR
Trigger: CCTACTGCTGAGCATCCCTAAGGGAGACCTAAATCATACTTTGGGTGTGGTGACCCAGATGCACAGAGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
3UTR GCA 72 bp ACACCCTCAGAGAGGAGTGAAGTACAACATCCTCCATaGTTCCCAGAGCAGGACAAACCTTCTGTATGCCTG +
Preference number: 3 (lower is better)
Translates to: TPSERSEVQHPP*FPEQDKPSVCL
Trigger: CAGGCATACAGAAGGTTTGTCCTGCTCTGGGAAGCATGGAGGATGTTGTACTTCACTCCTCTCTGAGGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR CCA 72 bp AGAAGGAATCATGCCTCCTGGTTGAGTTTGATTCCCTaGTTCATCTTGAGGCTGCCTCTAAGGAGGGGCATG +
Preference number: 3 (lower is better)
Translates to: RRNHASWLSLIP*FILRLPLRRGM
Trigger: CATGCCCCTCCTTAGAGGCAGCCTCAAGATGAACCAGGGAATCAAACTCAACCAGGAGGCATGATTCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR GCA 72 bp CCTCCATGCTTCCCAGAGCAGGACAAACCTTCTGTATaGCTGCTGCCTTGTCTCATTCTGGTTCACAGAATT +
Preference number: 3 (lower is better)
Translates to: PPCFPEQDKPSV*LLPCLILVHRI
Trigger: AATTCTGTGAACCAGAATGAGACAAGGCAGCAGGCATACAGAAGGTTTGTCCTGCTCTGGGAAGCATGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR CCA 72 bp CTTGGGATCTTCTCACCTCTTCTTCAACTCTTCTGGTaGACACCCCTGGGAAAGGTACCCCTGTTTCTGTTA +
Preference number: 3 (lower is better)
Translates to: LGIFSPLLQLFW*TPLGKVPLFLL
Trigger: TAACAGAAACAGGGGTACCTTTCCCAGGGGTGTCCACCAGAAGAGTTGAAGAAGAGGTGAGAAGATCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR-3UTR CAA 90 bp GAGGTGTCTAAGCACAATTACTTCCAGCATATTGGAAAGCCTGCTCCCTCATCTGTGACAGGCTTCACCTaGGGATCTTCTCACCTCTTC +
Preference number: 3 (lower is better)
Translates to: EVSKHNYFQHIGKPAPSSVTGFT*GSSHLF
Trigger: GAAGAGGTGAGAAGATCCCAAGGTGAAGCCTGTCAC...AGATGAGGGAGCAGGCTTTCCAATATGCTGGAAGTAATTGTGCTTAGACACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR TCA 72 bp TCCTACAGCTTCTGCAGGAGTGTGTTTCCAGCACTCTaGAGATCATGTGTGAGAATAGGCTCTCTTTCCCTG +
Preference number: 3 (lower is better)
Translates to: SYSFCRSVFPAL*RSCVRIGSLSL
Trigger: CAGGGAAAGAGAGCCTATTCTCACACATGATCTTCAGAGTGCTGGAAACACACTCCTGCAGAAGCTGTAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
3UTR GCA 72 bp GCTTCCCAGAGCAGGACAAACCTTCTGTATGCCTGCTaGCTTGTCTCATTCTGGTTCACAGAATTTCTATGG +
Preference number: 3 (lower is better)
Translates to: ASQSRTNLLYAC*LVSFWFTEFLW
Trigger: CCATAGAAATTCTGTGAACCAGAATGAGACAAGGCAGCAGGCATACAGAAGGTTTGTCCTGCTCTGGGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR TCA 72 bp ATTCTGCCTGACAGGTCTCTTTTCTGGGTGACACAGTaGGTCACTCAGGACCAGACAGAAGGTGATAAAAAC +
Preference number: 3 (lower is better)
Translates to: ILPDRSLFWVTQ*VTQDQTEGDKN
Trigger: GTTTTTATCACCTTCTGTCTGGTCCTGAGTGACTCACTGTGTCACCCAGAAAAGAGACCTGTCAGGCAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR CCA 72 bp AGATACAGGCTGCTGTGCCTCCCAGTGTTTCTTAGATaGGAATTTATGAACACATGTCTAGTTGGTGGTGCC +
Preference number: 3 (lower is better)
Translates to: RYRLLCLPVFLR*EFMNTCLVGGA
Trigger: GGCACCACCAACTAGACATGTGTTCATAAATTCCCATCTAAGAAACACTGGGAGGCACAGCAGCCTGTATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
3UTR CCA 72 bp TTTGTGCAATTGCAGGAGAGAAGGAATCATGCCTCCTaGTTGAGTTTGATTCCCTGGTTCATCTTGAGGCTG +
Preference number: 3 (lower is better)
Translates to: FVQLQERRNHAS*LSLIPWFILRL
Trigger: CAGCCTCAAGATGAACCAGGGAATCAAACTCAACCAGGAGGCATGATTCCTTCTCTCCTGCAATTGCACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR TCA 72 bp AGTTGGTCCTTTCTTATCTGGATATTGCTAGGCCACTaGAGACTTATGATTCATCATGGCCCAGTGACTCCA +
Preference number: 3 (lower is better)
Translates to: SWSFLIWILLGH*RLMIHHGPVTP
Trigger: TGGAGTCACTGGGCCATGATGAATCATAAGTCTTCAGTGGCCTAGCAATATCCAGATAAGAAAGGACCAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
3UTR-3UTR CAA 90 bp TGTATGCCTGCTGCCTTGTCTCATTCTGGTTCACAGAATTTCTATGGCAGCTTTACACGAAGGAAAATGTaGCAAATAGAGCCACAGCAT +
Preference number: 3 (lower is better)
Translates to: CMPAALSHSGSQNFYGSFTRRKM*QIEPQH
Trigger: ATGCTGTGGCTCTATTTGCAACATTTTCCTTCGTGT...AAAGCTGCCATAGAAATTCTGTGAACCAGAATGAGACAAGGCAGCAGGCATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR-3UTR CAA 90 bp CTTTCTAGACAGCTTGGGAGGATGAGGTGTCTAAGCACAATTACTTCCAGCATAATGTTTCACCACCACTaGTTTTTGTGCAATTGCAGG +
Preference number: 3 (lower is better)
Translates to: LSRQLGRMRCLSTITSSIMFHHH*FLCNCR
Trigger: CCTGCAATTGCACAAAAACAAGTGGTGGTGAAACAT...TATGCTGGAAGTAATTGTGCTTAGACACCTCATCCTCCCAAGCTGTCTAGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR CCA 72 bp ACAAACCTTCTGTATGCCTGCTGCCTTGTCTCATTCTaGTTCACAGAATTTCTATGGCAGCTTTCAGATGAA +
Preference number: 3 (lower is better)
Translates to: TNLLYACCLVSF*FTEFLWQLSDE
Trigger: TTCATCTGAAAGCTGCCATAGAAATTCTGTGAACCAGAATGAGACAAGGCAGCAGGCATACAGAAGGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR TCA 72 bp TCCAGCATATTGGAAAGCCTGCTCCCTCATCTCTTGTaGAAACAGAACAATGTTTCACCACCACTTGTTTTT +
Preference number: 3 (lower is better)
Translates to: SSILESLLPHLL*KQNNVSPPLVF
Trigger: AAAAACAAGTGGTGGTGAAACATTGTTCTGTTTTCACAAGAGATGAGGGAGCAGGCTTTCCAATATGCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR CCA 72 bp AAGGTAGGCTTGGCTAAGCTACGATGTTCAGTAGGTTaGGTGTATTCAATGCATTTTCAACTTCCAATATTT +
Preference number: 3 (lower is better)
Translates to: KVGLAKLRCSVG*VYSMHFQLPIF
Trigger: AAATATTGGAAGTTGAAAATGCATTGAATACACCCAACCTACTGAACATCGTAGCTTAGCCAAGCCTACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR TCA 90 bp CAGCAGCTGCCCCACAGATGGAGGCAGTTGAATGATTCAGCCCCCATCTGGGCCCTGTCCAGGCCACCCTaGAGGAAGGAACTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: QQLPHRWRQLNDSAPIWALSRPP*RKELGR
Trigger: CCTCCCCAGTTCCTTCCTTCAGGGTGGCCTGGACAG...GGCCCAGATGGGGGCTGAATCATTCAACTGCCTCCATCTGTGGGGCAGCTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR GCA 90 bp TCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTCAGAGATACAGGCTGCTGTGCCACGCCCGCTCTGGCTTaGTGGCATTTCCCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: SGPTLSSLLFLRDTGCCATPALA*WHFPGP
Trigger: CGGGCCAGGGAAATGCCAGCAAGCCAGAGCGGGCGT...GGCACAGCAGCCTGTATCTCTGAGGAAGAGGAGCGAGGACAACGTTGGCCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR TCA 90 bp CAGCTGCCCCACAGATGGAGGCAGTTGAATGATTCAGCCCCCATCTGGGCCAACCTGTCCAGGCCACCCTaGAGGAAGGAACTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: QLPHRWRQLNDSAPIWANLSRPP*RKELGR
Trigger: CCTCCCCAGTTCCTTCCTTCAGGGTGGCCTGGACAG...GTTGGCCCAGATGGGGGCTGAATCATTCAACTGCCTCCATCTGTGGGGCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp CAGTTGAATGATTCAGCCCCCATCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTCCTCGTGGGGCTCGGTaGCTCGCACCAAGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: QLNDSAPIWANVVLAPLPPRGAR*LAPRGG
Trigger: TCCTCCCCTTGGTGCGAGCCACCGAGCCCCACGAGG...AGGAAGAGGAGCGAGGACAACGTTGGCCCAGATGGGGGCTGAATCATTCAACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp GATTCAGCCCCCATCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTCAGAGATACAGAAGTGCGAGGCATTaGGCACGGCCAGGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: DSAPIWANVVLAPLPQRYRSARH*ARPGPP
Trigger: AGGCGGCCCTGGCCGTGCCCAATGCCTCGCACTTCT...GTATCTCTGAGGAAGAGGAGCGAGGACAACGTTGGCCCAGATGGGGGCTGAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp GAGAATAGGCTCTCTTTCCCTGCCTCAGGTGGAGACAGACCCCTCCCACTCCCTCCCGCTCTGGCTTGCTaGCATTTCCCTGGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: ENRLSFPASGGDRPLPLPPALAC*HFPGPC
Trigger: ACACGGGCCAGGGAAATGCCAGCAAGCCAGAGCGGG...AGGGAGTGGGAGGGGTCTGTCTCCACCTGAGGCAGGGAAAGAGAGCCTATTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp ATCCTCCATGCTTCCCAGAGCAGGACAAACCTTCTGTATGCCTGCTGCCTTGTCCCTCGTGGGGCTCGGTaGCTCGCACCAAGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: ILHASQSRTNLLYACCLVPRGAR*LAPRGG
Trigger: TCCTCCCCTTGGTGCGAGCCACCGAGCCCCACGAGG...GACAAGGCAGCAGGCATACAGAAGGTTTGTCCTGCTCTGGGAAGCATGGAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR CCA 90 bp CTGCCCCACAGATGGAGGCAGTTGAATGATTCAGCCCCCATCTGGGCCAACGTTGCAGGGCTTTCACCGTaGGGTTCTGGGACTCAGCGC +
Preference number: 4 (lower is better)
Translates to: LPHRWRQLNDSAPIWANVAGLSP*GSGTQR
Trigger: GCGCTGAGTCCCAGAACCCCACGGTGAAAGCCCTGC...AACGTTGGCCCAGATGGGGGCTGAATCATTCAACTGCCTCCATCTGTGGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp GAGAATAGGCTCTCTTTCCCTGCCTCAGGTGGAGACAGACCCCTCCCACTCCCTTGGGCAGGAGGTTATTaGCAAGGGGAGCCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: ENRLSFPASGGDRPLPLPWAGGY*QGEPSG
Trigger: GCCAGAGGGCTCCCCTTGCCAATAACCTCCTGCCCA...AGGGAGTGGGAGGGGTCTGTCTCCACCTGAGGCAGGGAAAGAGAGCCTATTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp CAGCAGCTGCCCCACAGATGGAGGCAGTTGAATGATTCAGCCCCCATCTGGGCCTTTCCCTGCCTCAGGTaGAGACAGACCCCTCCCACT +
Preference number: 4 (lower is better)
Translates to: QQLPHRWRQLNDSAPIWAFPCLR*RQTPPT
Trigger: AGTGGGAGGGGTCTGTCTCCACCTGAGGCAGGGAAA...GGCCCAGATGGGGGCTGAATCATTCAACTGCCTCCATCTGTGGGGCAGCTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp TTCAGCCCCCATCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTCAGAGATACAGCCCGCTCTGGCTTGCTaGCATTTCCCTGGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: FSPHLGQRCPRSSSSEIQPALAC*HFPGPC
Trigger: ACACGGGCCAGGGAAATGCCAGCAAGCCAGAGCGGG...CTGTATCTCTGAGGAAGAGGAGCGAGGACAACGTTGGCCCAGATGGGGGCTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp CTGCCCCACAGATGGAGGCAGTTGAATGATTCAGCCCCCATCTGGGCCAACGTTTCTCCACGCCCGCTCTaGCTTGCTGGCATTTCCCTG +
Preference number: 4 (lower is better)
Translates to: LPHRWRQLNDSAPIWANVSPRPL*LAGISL
Trigger: CAGGGAAATGCCAGCAAGCCAGAGCGGGCGTGGAGA...AACGTTGGCCCAGATGGGGGCTGAATCATTCAACTGCCTCCATCTGTGGGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR TCA 90 bp GAGAATAGGCTCTCTTTCCCTGCCTCAGGTGGAGACAGACCCCTCCCACTCCCTAGGAGTAAGCCACAATaGGCAGGGCTTTCACCGTGG +
Preference number: 4 (lower is better)
Translates to: ENRLSFPASGGDRPLPLPRSKPQ*AGLSPW
Trigger: CCACGGTGAAAGCCCTGCTCATTGTGGCTTACTCCT...AGGGAGTGGGAGGGGTCTGTCTCCACCTGAGGCAGGGAAAGAGAGCCTATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR TCA 90 bp CAGCTGCCCCACAGATGGAGGCAGTTGAATGATTCAGCCCCCATCTGGGCCAACATGGAGGCAGTTGAATaGTTCAGCCCCCATCTGGGC +
Preference number: 4 (lower is better)
Translates to: QLPHRWRQLNDSAPIWANMEAVE*FSPHLG
Trigger: GCCCAGATGGGGGCTGAATCATTCAACTGCCTCCAT...GTTGGCCCAGATGGGGGCTGAATCATTCAACTGCCTCCATCTGTGGGGCAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR TCA 90 bp CAGCAGCTGCCCCACAGATGGAGGCAGTTGAATGATTCAGCCCCCATCTGGGCCGGGACTTGGCAGTACTaGAGGTCCCGGACTAACAAT +
Preference number: 4 (lower is better)
Translates to: QQLPHRWRQLNDSAPIWAGTWQY*RSRTNN
Trigger: ATTGTTAGTCCGGGACCTTCAGTACTGCCAAGTCCC...GGCCCAGATGGGGGCTGAATCATTCAACTGCCTCCATCTGTGGGGCAGCTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR GCA 90 bp CAGCTGCCCCACAGATGGAGGCAGTTGAATGATTCAGCCCCCATCTGGGCCAACGTCAGTGCTGAGACGTaGAGTGAGCAGTACTGGGCA +
Preference number: 4 (lower is better)
Translates to: QLPHRWRQLNDSAPIWANVSAET*SEQYWA
Trigger: TGCCCAGTACTGCTCACTGCACGTCTCAGCACTGAC...GTTGGCCCAGATGGGGGCTGAATCATTCAACTGCCTCCATCTGTGGGGCAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR GCA 90 bp TTCAGCCCCCATCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTCAGAGATACAGCGGGGTTTCAAGGGGTaGATGATGACCTGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: FSPHLGQRCPRSSSSEIQRGFKG*MMTWWR
Trigger: TCGCCACCAGGTCATCATGCACCCCTTGAAACCCCG...CTGTATCTCTGAGGAAGAGGAGCGAGGACAACGTTGGCCCAGATGGGGGCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR GCA 90 bp TCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTCAGAGATACAGGCTGCTGTGCCCGCAGGGCAAAGTACTaGTCTGTGGTCACATCGCCA +
Preference number: 4 (lower is better)
Translates to: SGPTLSSLLFLRDTGCCARRAKY*SVVTSP
Trigger: TGGCGATGTGACCACAGAGCAGTACTTTGCCCTGCG...GGCACAGCAGCCTGTATCTCTGAGGAAGAGGAGCGAGGACAACGTTGGCCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp CTGCCCCACAGATGGAGGCAGTTGAATGATTCAGCCCCCATCTGGGCCAACGTTGGCGATCCACCGCAATaGCTGTCAGTGTCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LPHRWRQLNDSAPIWANVGDPPQ*LSVSVL
Trigger: CAGCACTGACACTGACAGCCATTGCGGTGGATCGCC...AACGTTGGCCCAGATGGGGGCTGAATCATTCAACTGCCTCCATCTGTGGGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR CCA 90 bp CAGCAGCTGCCCCACAGATGGAGGCAGTTGAATGATTCAGCCCCCATCTGGGCCTGTCCTCCTGAGGCTTaGGAGGTCTTTGACACATGC +
Preference number: 4 (lower is better)
Translates to: QQLPHRWRQLNDSAPIWACPPEA*EVFDTC
Trigger: GCATGTGTCAAAGACCTCCCAAGCCTCAGGAGGACA...GGCCCAGATGGGGGCTGAATCATTCAACTGCCTCCATCTGTGGGGCAGCTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp TTCAGCCCCCATCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTCAGAGATACAGTCTGTCTTCCCAGACTaGAGTTGGGAGGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: FSPHLGQRCPRSSSSEIQSVFPD*SWEVGR
Trigger: CCTGCCCACCTCCCAACTCCAGTCTGGGAAGACAGA...CTGTATCTCTGAGGAAGAGGAGCGAGGACAACGTTGGCCCAGATGGGGGCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
3UTR CAA 72 bp GCTGTAAGGCAGCAGCTGCCCCACAGATGGAGGCAGTaGAATGATTCAGCCCCCATCTGGGCCAACGTTGTC +
Preference number: 4 (lower is better)
Translates to: AVRQQLPHRWRQ*NDSAPIWANVV
Trigger: GACAACGTTGGCCCAGATGGGGGCTGAATCATTCAACTGCCTCCATCTGTGGGGCAGCTGCTGCCTTACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR TCA 90 bp TCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTCAGAGATACAGGCTGCTGTGCCGACACCCTTTGTGATTaGGATCCGGGGTTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: SGPTLSSLLFLRDTGCCADTLCD*DPGFQG
Trigger: CCCTTGAAACCCCGGATCTCAATCACAAAGGGTGTC...GGCACAGCAGCCTGTATCTCTGAGGAAGAGGAGCGAGGACAACGTTGGCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR TCA 90 bp CAGCAGCTGCCCCACAGATGGAGGCAGTTGAATGATTCAGCCCCCATCTGGGCCACAGATGGAGGCAGTTaGATGATTCAGCCCCCATCT +
Preference number: 4 (lower is better)
Translates to: QQLPHRWRQLNDSAPIWATDGGS*MIQPPS
Trigger: AGATGGGGGCTGAATCATTCAACTGCCTCCATCTGT...GGCCCAGATGGGGGCTGAATCATTCAACTGCCTCCATCTGTGGGGCAGCTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR TCA 90 bp CAGCAGCTGCCCCACAGATGGAGGCAGTTGAATGATTCAGCCCCCATCTGGGCCTTCATCATGGCCCAGTaGCTCCAGAAAGTGAGGCAT +
Preference number: 4 (lower is better)
Translates to: QQLPHRWRQLNDSAPIWAFIMAQ*LQKVRH
Trigger: ATGCCTCACTTTCTGGAGTCACTGGGCCATGATGAA...GGCCCAGATGGGGGCTGAATCATTCAACTGCCTCCATCTGTGGGGCAGCTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR TCA 90 bp CTGCCCCACAGATGGAGGCAGTTGAATGATTCAGCCCCCATCTGGGCCAACGTTGTTCTGTCTGCGTGGTaGCAGGCTTCACCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: LPHRWRQLNDSAPIWANVVLSAW*QASPWD
Trigger: ATCCCAAGGTGAAGCCTGTCACCACGCAGACAGAAC...AACGTTGGCCCAGATGGGGGCTGAATCATTCAACTGCCTCCATCTGTGGGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR GCA 90 bp CTGCCCCACAGATGGAGGCAGTTGAATGATTCAGCCCCCATCTGGGCCAACGTTTTCCAAGAGAAGAAGTaGGAGGCATTGGGCACGGCC +
Preference number: 4 (lower is better)
Translates to: LPHRWRQLNDSAPIWANVFQEKK*EALGTA
Trigger: GGCCGTGCCCAATGCCTCGCACTTCTTCTCTTGGAA...AACGTTGGCCCAGATGGGGGCTGAATCATTCAACTGCCTCCATCTGTGGGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp CCTAGGAATTCAAGAGTCCTACAGCTTCTGCAGGAGTGTGTTTCCAGCACTCTGAGAAGTGCGAGGCATTaGGCACGGCCAGGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: PRNSRVLQLLQECVSSTLRSARH*ARPGPP
Trigger: AGGCGGCCCTGGCCGTGCCCAATGCCTCGCACTTCT...CAGAGTGCTGGAAACACACTCCTGCAGAAGCTGTAGGACTCTTGAATTCCTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp CAGTTGAATGATTCAGCCCCCATCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTTTTCCCTGCCTCAGGTaGAGACAGACCCCTCCCACT +
Preference number: 4 (lower is better)
Translates to: QLNDSAPIWANVVLAPLPFPCLR*RQTPPT
Trigger: AGTGGGAGGGGTCTGTCTCCACCTGAGGCAGGGAAA...AGGAAGAGGAGCGAGGACAACGTTGGCCCAGATGGGGGCTGAATCATTCAACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp GTCCTCGCTCCTCTTCCTCAGAGATACAGGCTGCTGTGCCTCCCAGTGTTTCTTGGAGGCCTAGGCAGGTaGATCACGAGGTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: VLAPLPQRYRLLCLPVFLGGLGR*ITRSGD
Trigger: ATCTCCTGACCTCGTGATCCACCTGCCTAGGCCTCC...AAGAAACACTGGGAGGCACAGCAGCCTGTATCTCTGAGGAAGAGGAGCGAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR TCA 90 bp CAGTTGAATGATTCAGCCCCCATCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTCATTGTTGGTGCGGATaGCCTTGCTGGACAGGAGGA +
Preference number: 4 (lower is better)
Translates to: QLNDSAPIWANVVLAPLPHCWCG*PCWTGG
Trigger: TCCTCCTGTCCAGCAAGGTCATCCGCACCAACAATG...AGGAAGAGGAGCGAGGACAACGTTGGCCCAGATGGGGGCTGAATCATTCAACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR TCA 90 bp TCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTCAGAGATACAGGCTGCTGTGCCCCTTTAGCTCAATCCTaGAGTTCTCGTTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SGPTLSSLLFLRDTGCCAPLAQS*SSRSAS
Trigger: GCTGGCTGAACGAGAACTTCAGGATTGAGCTAAAGG...GGCACAGCAGCCTGTATCTCTGAGGAAGAGGAGCGAGGACAACGTTGGCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR TCA 90 bp TCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTCAGAGATACAGGCTGCTGTGCCACAGATGGAGGCAGTTaGATGATTCAGCCCCCATCT +
Preference number: 4 (lower is better)
Translates to: SGPTLSSLLFLRDTGCCATDGGS*MIQPPS
Trigger: AGATGGGGGCTGAATCATTCAACTGCCTCCATCTGT...GGCACAGCAGCCTGTATCTCTGAGGAAGAGGAGCGAGGACAACGTTGGCCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR GCA 90 bp CAGTTGAATGATTCAGCCCCCATCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTCGCAGGGCAAAGTACTaGTCTGTGGTCACATCGCCA +
Preference number: 4 (lower is better)
Translates to: QLNDSAPIWANVVLAPLPRRAKY*SVVTSP
Trigger: TGGCGATGTGACCACAGAGCAGTACTTTGCCCTGCG...AGGAAGAGGAGCGAGGACAACGTTGGCCCAGATGGGGGCTGAATCATTCAACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp GTCCTCGCTCCTCTTCCTCAGAGATACAGGCTGCTGTGCCTCCCAGTGTTTCTTACAGCCACAGTTTCTTaGCCACACGAGCGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: VLAPLPQRYRLLCLPVFLTATVS*PHERRP
Trigger: TGGCCTACGCTCGTGTGGCCAAGAAACTGTGGCTGT...AAGAAACACTGGGAGGCACAGCAGCCTGTATCTCTGAGGAAGAGGAGCGAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp AAAGTGAGGCATAAAAATCTCCACGCCCGCTCTGGCTTGCTGGCATTTCCCTGGTCTGTCTTCCCAGACTaGAGTTGGGAGGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: KVRHKNLHARSGLLAFPWSVFPD*SWEVGR
Trigger: CCTGCCCACCTCCCAACTCCAGTCTGGGAAGACAGA...CCAGGGAAATGCCAGCAAGCCAGAGCGGGCGTGGAGATTTTTATGCCTCACTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR TCA 90 bp TCTACAATAGGGGGCAGTTCTGTCTGCGTGGTGACAGGCTTCACCTTGGGATCTCAGAGCAGCAAGAGGTaGGGGACCATTTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: STIGGSSVCVVTGFTLGSQSSKR*GTILQE
Trigger: CTCCTGCAAAATGGTCCCTCACCTCTTGCTGCTCTG...AGATCCCAAGGTGAAGCCTGTCACCACGCAGACAGAACTGCCCCCTATTGTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR TCA 90 bp GTCCTCGCTCCTCTTCCTCAGAGATACAGGCTGCTGTGCCTCCCAGTGTTTCTTGGCTTGGGAGGTCTTTaGCACATGCTCAGTAATGCC +
Preference number: 4 (lower is better)
Translates to: VLAPLPQRYRLLCLPVFLGLGGL*HMLSNA
Trigger: GGCATTACTGAGCATGTGTCAAAGACCTCCCAAGCC...AAGAAACACTGGGAGGCACAGCAGCCTGTATCTCTGAGGAAGAGGAGCGAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR TCA 90 bp GATTCAGCCCCCATCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTCAGAGATACAATGGGTTCCACAGATaGCAGGTCTGTCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: DSAPIWANVVLAPLPQRYNGFHR*QVCLPR
Trigger: TCTGGGAAGACAGACCTGTCATCTGTGGAACCCATT...GTATCTCTGAGGAAGAGGAGCGAGGACAACGTTGGCCCAGATGGGGGCTGAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR GCA 90 bp GAGAATAGGCTCTCTTTCCCTGCCTCAGGTGGAGACAGACCCCTCCCACTCCCTCATTATGTCGGCAACTaGCAGGTTGACGATGAAGAG +
Preference number: 4 (lower is better)
Translates to: ENRLSFPASGGDRPLPLPHYVGN*QVDDEE
Trigger: CTCTTCATCGTCAACCTGGCAGTTGCCGACATAATG...AGGGAGTGGGAGGGGTCTGTCTCCACCTGAGGCAGGGAAAGAGAGCCTATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR GCA 90 bp CTGCCCCACAGATGGAGGCAGTTGAATGATTCAGCCCCCATCTGGGCCAACGTTAGGGGTTATAGCAGGTaGTGCTCATGGCAAACCAGT +
Preference number: 4 (lower is better)
Translates to: LPHRWRQLNDSAPIWANVRGYSR*CSWQTS
Trigger: ACTGGTTTGCCATGAGCAGCACCTGCTATAACCCCT...AACGTTGGCCCAGATGGGGGCTGAATCATTCAACTGCCTCCATCTGTGGGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR GCA 90 bp CTGCCCCACAGATGGAGGCAGTTGAATGATTCAGCCCCCATCTGGGCCAACGTTGAGTCCTACAGCTTCTaGAGGAGTGTGTTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LPHRWRQLNDSAPIWANVESYSF*RSVFPA
Trigger: TGCTGGAAACACACTCCTGCAGAAGCTGTAGGACTC...AACGTTGGCCCAGATGGGGGCTGAATCATTCAACTGCCTCCATCTGTGGGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR GCA 90 bp GAGGTGTCTAAGCACAATTACTTCCAGCATATTGGAAAGCCTGCTCCCTCATCTACGCCCGCTCTGGCTTaGTGGCATTTCCCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: EVSKHNYFQHIGKPAPSSTPALA*WHFPGP
Trigger: CGGGCCAGGGAAATGCCAGCAAGCCAGAGCGGGCGT...AGATGAGGGAGCAGGCTTTCCAATATGCTGGAAGTAATTGTGCTTAGACACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR GCA 90 bp TCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTCAGAGATACAGGCTGCTGTGCCCTTCTGTATGCCTGCTaGCTTGTCTCATTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: SGPTLSSLLFLRDTGCCALLYAC*LVSFWF
Trigger: GAACCAGAATGAGACAAGGCAGCAGGCATACAGAAG...GGCACAGCAGCCTGTATCTCTGAGGAAGAGGAGCGAGGACAACGTTGGCCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR CCA 90 bp CAGCAGCTGCCCCACAGATGGAGGCAGTTGAATGATTCAGCCCCCATCTGGGCCAACTCATCGTCACAATaGGTTCCACAGATGACAGGT +
Preference number: 4 (lower is better)
Translates to: QQLPHRWRQLNDSAPIWANSSSQ*VPQMTG
Trigger: ACCTGTCATCTGTGGAACCCATTGTGACGATGAGTT...GGCCCAGATGGGGGCTGAATCATTCAACTGCCTCCATCTGTGGGGCAGCTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp AAAGTGAGGCATAAAAATCTCCACGCCCGCTCTGGCTTGCTGGCATTTCCCTGGTCTGGTGGACACCCCTaGGAAAGGTACCCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: KVRHKNLHARSGLLAFPWSGGHP*ERYPCF
Trigger: GAAACAGGGGTACCTTTCCCAGGGGTGTCCACCAGA...CCAGGGAAATGCCAGCAAGCCAGAGCGGGCGTGGAGATTTTTATGCCTCACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR TCA 90 bp TCAAGAGTCCTACAGCTTCTGCAGGAGTGTGTTTCCAGCACTCTGAAGATCATGACTGGGCAAAGCGGCTaGCATGGCACATGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: SRVLQLLQECVSSTLKIMTGQSG*HGTCPS
Trigger: GGAAGGGCATGTGCCATGTCAGCCGCTTTGCCCAGT...CATGATCTTCAGAGTGCTGGAAACACACTCCTGCAGAAGCTGTAGGACTCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR GCA 90 bp TCAAGAGTCCTACAGCTTCTGCAGGAGTGTGTTTCCAGCACTCTGAAGATCATGCGCCGTAGCGCCTCCTaGCCACAAAGTTCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: SRVLQLLQECVSSTLKIMRRSAS*PQSSAS
Trigger: ACTGGCAGAACTTTGTGGGCAGGAGGCGCTACGGCG...CATGATCTTCAGAGTGCTGGAAACACACTCCTGCAGAAGCTGTAGGACTCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR GCA 90 bp CTGCCCCACAGATGGAGGCAGTTGAATGATTCAGCCCCCATCTGGGCCAACGTTCATTATGTCGGCAACTaGCAGGTTGACGATGAAGAG +
Preference number: 4 (lower is better)
Translates to: LPHRWRQLNDSAPIWANVHYVGN*QVDDEE
Trigger: CTCTTCATCGTCAACCTGGCAGTTGCCGACATAATG...AACGTTGGCCCAGATGGGGGCTGAATCATTCAACTGCCTCCATCTGTGGGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp CTGGATATTGCTAGGCCACTGAAGACTTATGATTCATCATGGCCCAGTGACTCCTGGGCAGGAGGTTATTaGCAAGGGGAGCCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LDIARPLKTYDSSWPSDSWAGGY*QGEPSG
Trigger: GCCAGAGGGCTCCCCTTGCCAATAACCTCCTGCCCA...GGAGTCACTGGGCCATGATGAATCATAAGTCTTCAGTGGCCTAGCAATATCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp CAGTTGAATGATTCAGCCCCCATCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTAGAGCTCTGTGCATCTaGGTCACCACACCCAAAGTA +
Preference number: 4 (lower is better)
Translates to: QLNDSAPIWANVVLAPLPRALCI*VTTPKV
Trigger: TACTTTGGGTGTGGTGACCCAGATGCACAGAGCTCT...AGGAAGAGGAGCGAGGACAACGTTGGCCCAGATGGGGGCTGAATCATTCAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp GTCCTCGCTCCTCTTCCTCAGAGATACAGGCTGCTGTGCCTCCCAGTGTTTCTTTTGCTGGCATTTCCCTaGCCCGTGTACCTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: VLAPLPQRYRLLCLPVFLLLAFP*PVYLFQ
Trigger: TTGAAACAGGTACACGGGCCAGGGAAATGCCAGCAA...AAGAAACACTGGGAGGCACAGCAGCCTGTATCTCTGAGGAAGAGGAGCGAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp GATTCAGCCCCCATCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTCAGAGATACAGGAATCATGCCTCCTaGTTGAGTTTGATTCCCTGG +
Preference number: 4 (lower is better)
Translates to: DSAPIWANVVLAPLPQRYRNHAS*LSLIPW
Trigger: CCAGGGAATCAAACTCAACCAGGAGGCATGATTCCT...GTATCTCTGAGGAAGAGGAGCGAGGACAACGTTGGCCCAGATGGGGGCTGAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR CCA 90 bp TCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTCAGAGATACAGGCTGCTGTGCCTTACTTCCAGCATATTaGAAAGCCTGCTCCCTCATC +
Preference number: 4 (lower is better)
Translates to: SGPTLSSLLFLRDTGCCALLPAY*KACSLI
Trigger: GATGAGGGAGCAGGCTTTCCAATATGCTGGAAGTAA...GGCACAGCAGCCTGTATCTCTGAGGAAGAGGAGCGAGGACAACGTTGGCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR CAA 72 bp AAAGTGAGGCATAAAAATCTCCACGCCCGCTCTGGCTaGCTGGCATTTCCCTGGCCCGTGTACCTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: KVRHKNLHARSG*LAFPWPVYLFQ
Trigger: TTGAAACAGGTACACGGGCCAGGGAAATGCCAGCAAGCCAGAGCGGGCGTGGAGATTTTTATGCCTCACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR TCA 90 bp AAAGTGAGGCATAAAAATCTCCACGCCCGCTCTGGCTTGCTGGCATTTCCCTGGCCTTTAGCTCAATCCTaGAGTTCTCGTTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: KVRHKNLHARSGLLAFPWPLAQS*SSRSAS
Trigger: GCTGGCTGAACGAGAACTTCAGGATTGAGCTAAAGG...CCAGGGAAATGCCAGCAAGCCAGAGCGGGCGTGGAGATTTTTATGCCTCACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR TCA 90 bp CCTAGGAATTCAAGAGTCCTACAGCTTCTGCAGGAGTGTGTTTCCAGCACTCTGATGGAGGCAGTTGAATaGTTCAGCCCCCATCTGGGC +
Preference number: 4 (lower is better)
Translates to: PRNSRVLQLLQECVSSTLMEAVE*FSPHLG
Trigger: GCCCAGATGGGGGCTGAATCATTCAACTGCCTCCAT...CAGAGTGCTGGAAACACACTCCTGCAGAAGCTGTAGGACTCTTGAATTCCTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR TCA 90 bp CAGTTGAATGATTCAGCCCCCATCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTACCACACCCAAAGTATaGTTTAGGTCTCCCTTAGGG +
Preference number: 4 (lower is better)
Translates to: QLNDSAPIWANVVLAPLPTTPKV*FRSPLG
Trigger: CCCTAAGGGAGACCTAAATCATACTTTGGGTGTGGT...AGGAAGAGGAGCGAGGACAACGTTGGCCCAGATGGGGGCTGAATCATTCAACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR TCA 90 bp GATTCAGCCCCCATCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTCAGAGATACAGTGACTCCAGAAAGTaGGGCATAAAAATCTCCACG +
Preference number: 4 (lower is better)
Translates to: DSAPIWANVVLAPLPQRYSDSRK*GIKIST
Trigger: CGTGGAGATTTTTATGCCTCACTTTCTGGAGTCACT...GTATCTCTGAGGAAGAGGAGCGAGGACAACGTTGGCCCAGATGGGGGCTGAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR TCA 90 bp GAGAATAGGCTCTCTTTCCCTGCCTCAGGTGGAGACAGACCCCTCCCACTCCCTTTACAGGGAAGCAGATaGTGTGAGCAAGTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: ENRLSFPASGGDRPLPLPLQGSR*CEQVQF
Trigger: AAACTGAACTTGCTCACATCATCTGCTTCCCTGTAA...AGGGAGTGGGAGGGGTCTGTCTCCACCTGAGGCAGGGAAAGAGAGCCTATTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR TCA 90 bp CAGTTGAATGATTCAGCCCCCATCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTACTCTGTCTGCCCAATaGAAGTCATGGTTTTGCCCA +
Preference number: 4 (lower is better)
Translates to: QLNDSAPIWANVVLAPLPTLSAQ*KSWFCP
Trigger: TGGGCAAAACCATGACTTTCATTGGGCAGACAGAGT...AGGAAGAGGAGCGAGGACAACGTTGGCCCAGATGGGGGCTGAATCATTCAACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR GCA 90 bp AGCTTCTGTATTCCTAGACACCCTCAGAGAGGAGTGAAGTACAACATCCTCCATCGCCGTAGCGCCTCCTaGCCACAAAGTTCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: SFCIPRHPQRGVKYNILHRRSAS*PQSSAS
Trigger: ACTGGCAGAACTTTGTGGGCAGGAGGCGCTACGGCG...ATGGAGGATGTTGTACTTCACTCCTCTCTGAGGGTGTCTAGGAATACAGAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR GCA 90 bp GTCCTCGCTCCTCTTCCTCAGAGATACAGGCTGCTGTGCCTCCCAGTGTTTCTTTGGTCTTCTTCTTTTTaGGCCGCAGGGCAAAGTACT +
Preference number: 4 (lower is better)
Translates to: VLAPLPQRYRLLCLPVFLWSSSF*AAGQST
Trigger: AGTACTTTGCCCTGCGGCGCAAAAAGAAGAAGACCA...AAGAAACACTGGGAGGCACAGCAGCCTGTATCTCTGAGGAAGAGGAGCGAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR GCA 90 bp ATCCTCCATGCTTCCCAGAGCAGGACAAACCTTCTGTATGCCTGCTGCCTTGTCGGTTATAGCAGGTGCTaGTCATGGCAAACCAGTGGA +
Preference number: 4 (lower is better)
Translates to: ILHASQSRTNLLYACCLVGYSRC*SWQTSG
Trigger: TCCACTGGTTTGCCATGAGCAGCACCTGCTATAACC...GACAAGGCAGCAGGCATACAGAAGGTTTGTCCTGCTCTGGGAAGCATGGAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR GCA 90 bp CAGCAGCTGCCCCACAGATGGAGGCAGTTGAATGATTCAGCCCCCATCTGGGCCAAAGAAGTCACTTTTTaGTCAAAGTCACACACGGAC +
Preference number: 4 (lower is better)
Translates to: QQLPHRWRQLNDSAPIWAKEVTF*SKSHTD
Trigger: GTCCGTGTGTGACTTTGAGCAAAAAGTGACTTCTTT...GGCCCAGATGGGGGCTGAATCATTCAACTGCCTCCATCTGTGGGGCAGCTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR CCA 90 bp CCTAGGAATTCAAGAGTCCTACAGCTTCTGCAGGAGTGTGTTTCCAGCACTCTGACAGCCACAGTTTCTTaGCCACACGAGCGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: PRNSRVLQLLQECVSSTLTATVS*PHERRP
Trigger: TGGCCTACGCTCGTGTGGCCAAGAAACTGTGGCTGT...CAGAGTGCTGGAAACACACTCCTGCAGAAGCTGTAGGACTCTTGAATTCCTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp CCTAGGAATTCAAGAGTCCTACAGCTTCTGCAGGAGTGTGTTTCCAGCACTCTGGCAAGGGGAGCCCTCTaGCCATCATTCTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: PRNSRVLQLLQECVSSTLARGAL*PSFFSV
Trigger: GACAGAGAAGAATGATGGCCAGAGGGCTCCCCTTGC...CAGAGTGCTGGAAACACACTCCTGCAGAAGCTGTAGGACTCTTGAATTCCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp CAGCAGCTGCCCCACAGATGGAGGCAGTTGAATGATTCAGCCCCCATCTGGGCCGAACACATGTCTAGTTaGTGGTGCCTTTTAGTTTTC +
Preference number: 4 (lower is better)
Translates to: QQLPHRWRQLNDSAPIWAEHMSS*WCLLVF
Trigger: GAAAACTAAAAGGCACCACCAACTAGACATGTGTTC...GGCCCAGATGGGGGCTGAATCATTCAACTGCCTCCATCTGTGGGGCAGCTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp TCAAGAGTCCTACAGCTTCTGCAGGAGTGTGTTTCCAGCACTCTGAAGATCATGGATTCAGCCCCCATCTaGGCCAACGTTGTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: SRVLQLLQECVSSTLKIMDSAPI*ANVVLA
Trigger: AGCGAGGACAACGTTGGCCCAGATGGGGGCTGAATC...CATGATCTTCAGAGTGCTGGAAACACACTCCTGCAGAAGCTGTAGGACTCTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp CTGGATATTGCTAGGCCACTGAAGACTTATGATTCATCATGGCCCAGTGACTCCGATTCAGCCCCCATCTaGGCCAACGTTGTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: LDIARPLKTYDSSWPSDSDSAPI*ANVVLA
Trigger: AGCGAGGACAACGTTGGCCCAGATGGGGGCTGAATC...GGAGTCACTGGGCCATGATGAATCATAAGTCTTCAGTGGCCTAGCAATATCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp TCTACAATAGGGGGCAGTTCTGTCTGCGTGGTGACAGGCTTCACCTTGGGATCTTTGCTGGCATTTCCCTaGCCCGTGTACCTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: STIGGSSVCVVTGFTLGSLLAFP*PVYLFQ
Trigger: TTGAAACAGGTACACGGGCCAGGGAAATGCCAGCAA...AGATCCCAAGGTGAAGCCTGTCACCACGCAGACAGAACTGCCCCCTATTGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR CCA 90 bp TTCAGCCCCCATCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTCAGAGATACAGTTGAGTTTGATTCCCTaGTTCATCTTGAGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: FSPHLGQRCPRSSSSEIQLSLIP*FILRLP
Trigger: AGGCAGCCTCAAGATGAACCAGGGAATCAAACTCAA...CTGTATCTCTGAGGAAGAGGAGCGAGGACAACGTTGGCCCAGATGGGGGCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR TCA 90 bp CTGGATATTGCTAGGCCACTGAAGACTTATGATTCATCATGGCCCAGTGACTCCCAGAGCAGCAAGAGGTaGGGGACCATTTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LDIARPLKTYDSSWPSDSQSSKR*GTILQE
Trigger: CTCCTGCAAAATGGTCCCTCACCTCTTGCTGCTCTG...GGAGTCACTGGGCCATGATGAATCATAAGTCTTCAGTGGCCTAGCAATATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR TCA 90 bp GTCCTCGCTCCTCTTCCTCAGAGATACAGGCTGCTGTGCCTCCCAGTGTTTCTTAGTGACTCCAGAAAGTaGGGCATAAAAATCTCCACG +
Preference number: 4 (lower is better)
Translates to: VLAPLPQRYRLLCLPVFLSDSRK*GIKIST
Trigger: CGTGGAGATTTTTATGCCTCACTTTCTGGAGTCACT...AAGAAACACTGGGAGGCACAGCAGCCTGTATCTCTGAGGAAGAGGAGCGAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR TCA 90 bp TCTACAATAGGGGGCAGTTCTGTCTGCGTGGTGACAGGCTTCACCTTGGGATCTGCCAAGAGGTCTAAGTaGCAAACTCTTTCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: STIGGSSVCVVTGFTLGSAKRSK*QTLSPS
Trigger: TGAGGGAGAAAGAGTTTGTCACTTAGACCTCTTGGC...AGATCCCAAGGTGAAGCCTGTCACCACGCAGACAGAACTGCCCCCTATTGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR TCA 90 bp CAGTTGAATGATTCAGCCCCCATCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTATGAGCCATTTGTCCTaGAAAATCCATCTGGGGATC +
Preference number: 4 (lower is better)
Translates to: QLNDSAPIWANVVLAPLPMSHLS*KIHLGI
Trigger: GATCCCCAGATGGATTTTTCAGGACAAATGGCTCAT...AGGAAGAGGAGCGAGGACAACGTTGGCCCAGATGGGGGCTGAATCATTCAACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR TCA 90 bp GATTCAGCCCCCATCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTCAGAGATACAGGCTTTGTGTTAAATaGTTTTTCCCAGCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: DSAPIWANVVLAPLPQRYRLCVK*FFPAVG
Trigger: GCCTACAGCTGGGAAAAATCATTTAACACAAAGCCT...GTATCTCTGAGGAAGAGGAGCGAGGACAACGTTGGCCCAGATGGGGGCTGAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR GCA 90 bp GATTCAGCCCCCATCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTCAGAGATACGAGGTCTTTGACACATaGTCAGTAATGCCTTTAGCT +
Preference number: 4 (lower is better)
Translates to: DSAPIWANVVLAPLPQRYEVFDT*SVMPLA
Trigger: AGCTAAAGGCATTACTGAGCATGTGTCAAAGACCTC...GTATCTCTGAGGAAGAGGAGCGAGGACAACGTTGGCCCAGATGGGGGCTGAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp TCAACTCTTCTGGTGGACACCCCTGGGAAAGGTACCCCTGTTTCTGTTAATCATTGCAGTGAGCAGTACTaGGCAAAGCGGCTGACATGG +
Preference number: 4 (lower is better)
Translates to: STLLVDTPGKGTPVSVNHCSEQY*AKRLTW
Trigger: CCATGTCAGCCGCTTTGCCCAGTACTGCTCACTGCA...ATGATTAACAGAAACAGGGGTACCTTTCCCAGGGGTGTCCACCAGAAGAGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR CCA 90 bp CTTCTGTATGCCTGCTGCCTTGTCTCATTCTGGTTCACAGAATTTCTATGGCAGGGGTGCATGATGACCTaGTGGCGATCCACCGCAATG +
Preference number: 4 (lower is better)
Translates to: LLYACCLVSFWFTEFLWQGCMMT*WRSTAM
Trigger: CATTGCGGTGGATCGCCACCAGGTCATCATGCACCC...CTGCCATAGAAATTCTGTGAACCAGAATGAGACAAGGCAGCAGGCATACAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR CCA 90 bp GATTCAGCCCCCATCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTCAGAGATACCAAAGTACTGCTCTGTaGTCACATCGCCAATCATAT +
Preference number: 4 (lower is better)
Translates to: DSAPIWANVVLAPLPQRYQSTAL*SHRQSY
Trigger: ATATGATTGGCGATGTGACCACAGAGCAGTACTTTG...GTATCTCTGAGGAAGAGGAGCGAGGACAACGTTGGCCCAGATGGGGGCTGAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR TCA 90 bp GAGGTGTCTAAGCACAATTACTTCCAGCATATTGGAAAGCCTGCTCCCTCATCTAGGAGTAAGCCACAATaGGCAGGGCTTTCACCGTGG +
Preference number: 4 (lower is better)
Translates to: EVSKHNYFQHIGKPAPSSRSKPQ*AGLSPW
Trigger: CCACGGTGAAAGCCCTGCTCATTGTGGCTTACTCCT...AGATGAGGGAGCAGGCTTTCCAATATGCTGGAAGTAATTGTGCTTAGACACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR TCA 90 bp TCAACTCTTCTGGTGGACACCCCTGGGAAAGGTACCCCTGTTTCTGTTAATCATGACACCCTTTGTGATTaGGATCCGGGGTTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: STLLVDTPGKGTPVSVNHDTLCD*DPGFQG
Trigger: CCCTTGAAACCCCGGATCTCAATCACAAAGGGTGTC...ATGATTAACAGAAACAGGGGTACCTTTCCCAGGGGTGTCCACCAGAAGAGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR TCA 90 bp GATTCAGCCCCCATCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTCAGAGATACAGTGAAAGTTACACCTaGACCACCAAAATGATGTTG +
Preference number: 4 (lower is better)
Translates to: DSAPIWANVVLAPLPQRYSESYT*TTKMML
Trigger: CAACATCATTTTGGTGGTTCAGGTGTAACTTTCACT...GTATCTCTGAGGAAGAGGAGCGAGGACAACGTTGGCCCAGATGGGGGCTGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR TCA 90 bp GAGAATAGGCTCTCTTTCCCTGCCTCAGGTGGAGACAGACCCCTCCCACTCCCTATAAGTTTCTGTAAGTaGAAGTTACACCTGAACCAC +
Preference number: 4 (lower is better)
Translates to: ENRLSFPASGGDRPLPLPISFCK*KLHLNH
Trigger: GTGGTTCAGGTGTAACTTTCACTTACAGAAACTTAT...AGGGAGTGGGAGGGGTCTGTCTCCACCTGAGGCAGGGAAAGAGAGCCTATTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR TCA 90 bp CAGCTGCCCCACAGATGGAGGCAGTTGAATGATTCAGCCCCCATCTGGGCCAACCTCATATCCATGCTTTaGTTTCAGAGTTTATCTGGT +
Preference number: 4 (lower is better)
Translates to: QLPHRWRQLNDSAPIWANLISML*FQSLSG
Trigger: ACCAGATAAACTCTGAAATCAAAGCATGGATATGAG...GTTGGCCCAGATGGGGGCTGAATCATTCAACTGCCTCCATCTGTGGGGCAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR GCA 90 bp CTACAGCTTCTGCAGGAGTGTGTTTCCAGCACTCTGAAGATCATGTGTGAGAATTTCCAAGAGAAGAAGTaGGAGGCATTGGGCACGGCC +
Preference number: 4 (lower is better)
Translates to: LQLLQECVSSTLKIMCENFQEKK*EALGTA
Trigger: GGCCGTGCCCAATGCCTCGCACTTCTTCTCTTGGAA...ATTCTCACACATGATCTTCAGAGTGCTGGAAACACACTCCTGCAGAAGCTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR GCA 90 bp CTACAGCTTCTGCAGGAGTGTGTTTCCAGCACTCTGAAGATCATGTGTGAGAATAGGCTGGTGGCCGAGTaGATTCGCTGGTTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: LQLLQECVSSTLKIMCENRLVAE*IRWFLK
Trigger: CTTCAAGAACCAGCGAATGCACTCGGCCACCAGCCT...ATTCTCACACATGATCTTCAGAGTGCTGGAAACACACTCCTGCAGAAGCTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR GCA 90 bp CCTAGGAATTCAAGAGTCCTACAGCTTCTGCAGGAGTGTGTTTCCAGCACTCTGGGTTATAGCAGGTGCTaGTCATGGCAAACCAGTGGA +
Preference number: 4 (lower is better)
Translates to: PRNSRVLQLLQECVSSTLGYSRC*SWQTSG
Trigger: TCCACTGGTTTGCCATGAGCAGCACCTGCTATAACC...CAGAGTGCTGGAAACACACTCCTGCAGAAGCTGTAGGACTCTTGAATTCCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR GCA 90 bp GTCCTCGCTCCTCTTCCTCAGAGATACAGGCTGCTGTGCCTCCCAGTGTTTCTTGAGGTCTTTGACACATaGTCAGTAATGCCTTTAGCT +
Preference number: 4 (lower is better)
Translates to: VLAPLPQRYRLLCLPVFLEVFDT*SVMPLA
Trigger: AGCTAAAGGCATTACTGAGCATGTGTCAAAGACCTC...AAGAAACACTGGGAGGCACAGCAGCCTGTATCTCTGAGGAAGAGGAGCGAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR GCA 90 bp TCAAGAGTCCTACAGCTTCTGCAGGAGTGTGTTTCCAGCACTCTGAAGATCATGCTCAGAGATACAGGCTaGTGTGCCTCCCAGTGTTTC +
Preference number: 4 (lower is better)
Translates to: SRVLQLLQECVSSTLKIMLRDTG*CASQCF
Trigger: GAAACACTGGGAGGCACAGCAGCCTGTATCTCTGAG...CATGATCTTCAGAGTGCTGGAAACACACTCCTGCAGAAGCTGTAGGACTCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR GCA 90 bp CTGGATATTGCTAGGCCACTGAAGACTTATGATTCATCATGGCCCAGTGACTCCCTCAGAGATACAGGCTaGTGTGCCTCCCAGTGTTTC +
Preference number: 4 (lower is better)
Translates to: LDIARPLKTYDSSWPSDSLRDTG*CASQCF
Trigger: GAAACACTGGGAGGCACAGCAGCCTGTATCTCTGAG...GGAGTCACTGGGCCATGATGAATCATAAGTCTTCAGTGGCCTAGCAATATCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR GCA 90 bp TCTACAATAGGGGGCAGTTCTGTCTGCGTGGTGACAGGCTTCACCTTGGGATCTGCATATTGGAAAGCCTaGTCCCTCATCTCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: STIGGSSVCVVTGFTLGSAYWKA*SLISCE
Trigger: TTCACAAGAGATGAGGGAGCAGGCTTTCCAATATGC...AGATCCCAAGGTGAAGCCTGTCACCACGCAGACAGAACTGCCCCCTATTGTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR CCA 90 bp CTTCTGTATGCCTGCTGCCTTGTCTCATTCTGGTTCACAGAATTTCTATGGCAGTGCATGATGACCTGGTaGCGATCCACCGCAATGGCT +
Preference number: 4 (lower is better)
Translates to: LLYACCLVSFWFTEFLWQCMMTW*RSTAMA
Trigger: AGCCATTGCGGTGGATCGCCACCAGGTCATCATGCA...CTGCCATAGAAATTCTGTGAACCAGAATGAGACAAGGCAGCAGGCATACAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR CCA 90 bp GTCCTCGCTCCTCTTCCTCAGAGATACAGGCTGCTGTGCCTCCCAGTGTTTCTTCAAAGTACTGCTCTGTaGTCACATCGCCAATCATAT +
Preference number: 4 (lower is better)
Translates to: VLAPLPQRYRLLCLPVFLQSTAL*SHRQSY
Trigger: ATATGATTGGCGATGTGACCACAGAGCAGTACTTTG...AAGAAACACTGGGAGGCACAGCAGCCTGTATCTCTGAGGAAGAGGAGCGAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp TTCAGCCCCCATCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTCAGAGATACAGTCCATACAACCATTCTaGTTTTCACCTTCAGTACAG +
Preference number: 4 (lower is better)
Translates to: FSPHLGQRCPRSSSSEIQSIQPF*FSPSVQ
Trigger: CTGTACTGAAGGTGAAAACCAGAATGGTTGTATGGA...CTGTATCTCTGAGGAAGAGGAGCGAGGACAACGTTGGCCCAGATGGGGGCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR CAA 72 bp TTGCAGGAGAGAAGGAATCATGCCTCCTGGTTGAGTTaGATTCCCTGGTTCATCTTGAGGCTGCCTCTAAGG +
Preference number: 4 (lower is better)
Translates to: LQERRNHASWLS*IPWFILRLPLR
Trigger: CCTTAGAGGCAGCCTCAAGATGAACCAGGGAATCAAACTCAACCAGGAGGCATGATTCCTTCTCTCCTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR CAA 72 bp CCCAGAGCAGGACAAACCTTCTGTATGCCTGCTGCCTaGTCTCATTCTGGTTCACAGAATTTCTATGGCAGC +
Preference number: 4 (lower is better)
Translates to: PRAGQTFCMPAA*SHSGSQNFYGS
Trigger: GCTGCCATAGAAATTCTGTGAACCAGAATGAGACAAGGCAGCAGGCATACAGAAGGTTTGTCCTGCTCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR TCA 90 bp TTAGTTTTCACATCACATGGGGCTAGGAGGCTGGACAGTTTCCTAGGAATTCAAGGATGTAGAGCAGGATaGAGGTGGCCAAGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LVFTSHGARRLDSFLGIQGCRAG*RWPSPG
Trigger: ACCTGGACTTGGCCACCTTCATCCTGCTCTACATCC...TTGAATTCCTAGGAAACTGTCCAGCCTCCTAGCCCCATGTGATGTGAAAACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR TCA 90 bp TCAAGAGTCCTACAGCTTCTGCAGGAGTGTGTTTCCAGCACTCTGAAGATCATGAATGGGTTCCACAGATaGCAGGTCTGTCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SRVLQLLQECVSSTLKIMNGFHR*QVCLPR
Trigger: TCTGGGAAGACAGACCTGTCATCTGTGGAACCCATT...CATGATCTTCAGAGTGCTGGAAACACACTCCTGCAGAAGCTGTAGGACTCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR TCA 90 bp TCAAGAGTCCTACAGCTTCTGCAGGAGTGTGTTTCCAGCACTCTGAAGATCATGTTCATCATGGCCCAGTaGCTCCAGAAAGTGAGGCAT +
Preference number: 4 (lower is better)
Translates to: SRVLQLLQECVSSTLKIMFIMAQ*LQKVRH
Trigger: ATGCCTCACTTTCTGGAGTCACTGGGCCATGATGAA...CATGATCTTCAGAGTGCTGGAAACACACTCCTGCAGAAGCTGTAGGACTCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR TCA 90 bp TTGCAGGAGAGAAGGAATCATGCCTCCTGGTTGAGTTTGATTCCCTGGTTCATCAAGCTCGATTCTGCCTaGCAGGTCTCTTTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LQERRNHASWLSLIPWFIKLDSA*QVSFLG
Trigger: ACCCAGAAAAGAGACCTGTCAGGCAGAATCGAGCTT...GATGAACCAGGGAATCAAACTCAACCAGGAGGCATGATTCCTTCTCTCCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR TCA 90 bp TCTACAATAGGGGGCAGTTCTGTCTGCGTGGTGACAGGCTTCACCTTGGGATCTCCATTAGCTACTTCTTaGCACACCACAGAGACAATA +
Preference number: 4 (lower is better)
Translates to: STIGGSSVCVVTGFTLGSPLATS*HTTETI
Trigger: TATTGTCTCTGTGGTGTGTCAAGAAGTAGCTAATGG...AGATCCCAAGGTGAAGCCTGTCACCACGCAGACAGAACTGCCCCCTATTGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR GCA 90 bp ATCCTCCATGCTTCCCAGAGCAGGACAAACCTTCTGTATGCCTGCTGCCTTGTCCACCACTTGTTTTTGTaGAATTGCAGGAGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: ILHASQSRTNLLYACCLVHHLFL*NCRREG
Trigger: TCCTTCTCTCCTGCAATTGCACAAAAACAAGTGGTG...GACAAGGCAGCAGGCATACAGAAGGTTTGTCCTGCTCTGGGAAGCATGGAGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR CCA 90 bp CTACAGCTTCTGCAGGAGTGTGTTTCCAGCACTCTGAAGATCATGTGTGAGAATAGCAGGTGCTGCTCATaGCAAACCAGTGGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: LQLLQECVSSTLKIMCENSRCCS*QTSGRQ
Trigger: TTGCCTTCCACTGGTTTGCCATGAGCAGCACCTGCT...ATTCTCACACATGATCTTCAGAGTGCTGGAAACACACTCCTGCAGAAGCTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp CTTTCTAGACAGCTTGGGAGGATGAGGTGTCTAAGCACAATTACTTCCAGCATAGCAAGGGGAGCCCTCTaGCCATCATTCTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: LSRQLGRMRCLSTITSSIARGAL*PSFFSV
Trigger: GACAGAGAAGAATGATGGCCAGAGGGCTCCCCTTGC...TATGCTGGAAGTAATTGTGCTTAGACACCTCATCCTCCCAAGCTGTCTAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR CCA 90 bp CTACAGCTTCTGCAGGAGTGTGTTTCCAGCACTCTGAAGATCATGTGTGAGAATACTGGAGTTGGGAGGTaGGCAGGAGGTTATTGGCAA +
Preference number: 4 (lower is better)
Translates to: LQLLQECVSSTLKIMCENTGVGR*AGGYWQ
Trigger: TTGCCAATAACCTCCTGCCCACCTCCCAACTCCAGT...ATTCTCACACATGATCTTCAGAGTGCTGGAAACACACTCCTGCAGAAGCTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp GAGAATAGGCTCTCTTTCCCTGCCTCAGGTGGAGACAGACCCCTCCCACTCCCTCCAGTGTTTCTTAGATaGGAATTTATGAACACATGT +
Preference number: 4 (lower is better)
Translates to: ENRLSFPASGGDRPLPLPPVFLR*EFMNTC
Trigger: ACATGTGTTCATAAATTCCCATCTAAGAAACACTGG...AGGGAGTGGGAGGGGTCTGTCTCCACCTGAGGCAGGGAAAGAGAGCCTATTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp CTGGATATTGCTAGGCCACTGAAGACTTATGATTCATCATGGCCCAGTGACTCCCTTCTTCAACTCTTCTaGTGGACACCCCTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: LDIARPLKTYDSSWPSDSLLQLF*WTPLGK
Trigger: CTTTCCCAGGGGTGTCCACCAGAAGAGTTGAAGAAG...GGAGTCACTGGGCCATGATGAATCATAAGTCTTCAGTGGCCTAGCAATATCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR TCA 90 bp TTGCAGGAGAGAAGGAATCATGCCTCCTGGTTGAGTTTGATTCCCTGGTTCATCTTCTTGAAGATGACATaGCAGACCAGGACGTTGCCA +
Preference number: 4 (lower is better)
Translates to: LQERRNHASWLSLIPWFIFLKMT*QTRTLP
Trigger: TGGCAACGTCCTGGTCTGTCATGTCATCTTCAAGAA...GATGAACCAGGGAATCAAACTCAACCAGGAGGCATGATTCCTTCTCTCCTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR TCA 90 bp CTGGATATTGCTAGGCCACTGAAGACTTATGATTCATCATGGCCCAGTGACTCCACCACACCCAAAGTATaGTTTAGGTCTCCCTTAGGG +
Preference number: 4 (lower is better)
Translates to: LDIARPLKTYDSSWPSDSTTPKV*FRSPLG
Trigger: CCCTAAGGGAGACCTAAATCATACTTTGGGTGTGGT...GGAGTCACTGGGCCATGATGAATCATAAGTCTTCAGTGGCCTAGCAATATCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR TCA 90 bp CAGTTGAATGATTCAGCCCCCATCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTATATTGCTAGGCCACTaGAGACTTATGATTCATCAT +
Preference number: 4 (lower is better)
Translates to: QLNDSAPIWANVVLAPLPILLGH*RLMIHH
Trigger: ATGATGAATCATAAGTCTTCAGTGGCCTAGCAATAT...AGGAAGAGGAGCGAGGACAACGTTGGCCCAGATGGGGGCTGAATCATTCAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR GCA 90 bp CTACAGCTTCTGCAGGAGTGTGTTTCCAGCACTCTGAAGATCATGTGTGAGAATGAGTCCTACAGCTTCTaGAGGAGTGTGTTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LQLLQECVSSTLKIMCENESYSF*RSVFPA
Trigger: TGCTGGAAACACACTCCTGCAGAAGCTGTAGGACTC...ATTCTCACACATGATCTTCAGAGTGCTGGAAACACACTCCTGCAGAAGCTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR GCA 90 bp CAGTTGAATGATTCAGCCCCCATCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTATGTCTAGTTGGTGGTaGCTTTTAGTTTTCACATCA +
Preference number: 4 (lower is better)
Translates to: QLNDSAPIWANVVLAPLPMSSWW*LLVFTS
Trigger: TGATGTGAAAACTAAAAGGCACCACCAACTAGACAT...AGGAAGAGGAGCGAGGACAACGTTGGCCCAGATGGGGGCTGAATCATTCAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp TGTCTAAGCACAATTACTTCCAGCATATTGGAAAGCCTGCTCCCTCATCTCTTGGCAAAGCGGCTGACATaGCACATGCCCTTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: CLSTITSSILESLLPHLLAKRLT*HMPFPN
Trigger: ATTTGGGAAGGGCATGTGCCATGTCAGCCGCTTTGC...CAAGAGATGAGGGAGCAGGCTTTCCAATATGCTGGAAGTAATTGTGCTTAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR CCA 90 bp CTTTCTAGACAGCTTGGGAGGATGAGGTGTCTAAGCACAATTACTTCCAGCATATGTCCTCCTGAGGCTTaGGAGGTCTTTGACACATGC +
Preference number: 4 (lower is better)
Translates to: LSRQLGRMRCLSTITSSICPPEA*EVFDTC
Trigger: GCATGTGTCAAAGACCTCCCAAGCCTCAGGAGGACA...TATGCTGGAAGTAATTGTGCTTAGACACCTCATCCTCCCAAGCTGTCTAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR CCA 90 bp GAGGTGTCTAAGCACAATTACTTCCAGCATATTGGAAAGCCTGCTCCCTCATCTAGAGCTCTGTGCATCTaGGTCACCACACCCAAAGTA +
Preference number: 4 (lower is better)
Translates to: EVSKHNYFQHIGKPAPSSRALCI*VTTPKV
Trigger: TACTTTGGGTGTGGTGACCCAGATGCACAGAGCTCT...AGATGAGGGAGCAGGCTTTCCAATATGCTGGAAGTAATTGTGCTTAGACACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR TCA 90 bp TCAAGAGTCCTACAGCTTCTGCAGGAGTGTGTTTCCAGCACTCTGAAGATCATGGACGTTGCCAAAGAGTaGGAAGACAATGATGAAGGA +
Preference number: 4 (lower is better)
Translates to: SRVLQLLQECVSSTLKIMDVAKE*EDNDEG
Trigger: TCCTTCATCATTGTCTTCTCACTCTTTGGCAACGTC...CATGATCTTCAGAGTGCTGGAAACACACTCCTGCAGAAGCTGTAGGACTCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR TCA 90 bp CCTAGGAATTCAAGAGTCCTACAGCTTCTGCAGGAGTGTGTTTCCAGCACTCTGGTGTTTCCAGCACTCTaGAGATCATGTGTGAGAATA +
Preference number: 4 (lower is better)
Translates to: PRNSRVLQLLQECVSSTLVFPAL*RSCVRI
Trigger: TATTCTCACACATGATCTTCAGAGTGCTGGAAACAC...CAGAGTGCTGGAAACACACTCCTGCAGAAGCTGTAGGACTCTTGAATTCCTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR TCA 90 bp AAAGTGAGGCATAAAAATCTCCACGCCCGCTCTGGCTTGCTGGCATTTCCCTGGATATTGCTAGGCCACTaGAGACTTATGATTCATCAT +
Preference number: 4 (lower is better)
Translates to: KVRHKNLHARSGLLAFPWILLGH*RLMIHH
Trigger: ATGATGAATCATAAGTCTTCAGTGGCCTAGCAATAT...CCAGGGAAATGCCAGCAAGCCAGAGCGGGCGTGGAGATTTTTATGCCTCACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR TCA 90 bp GGCTTGGCTAAGCTACGATGTTCAGTAGGTTGGGTGTATTCAATGCATTTTCAATTCTGGGTGACACAGTaGGTCACTCAGGACCAGACA +
Preference number: 4 (lower is better)
Translates to: GLAKLRCSVGWVYSMHFQFWVTQ*VTQDQT
Trigger: TGTCTGGTCCTGAGTGACTCACTGTGTCACCCAGAA...TTGAAAATGCATTGAATACACCCAACCTACTGAACATCGTAGCTTAGCCAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR TCA 90 bp TGTATGCCTGCTGCCTTGTCTCATTCTGGTTCACAGAATTTCTATGGCAGCTTTACCCTCAGAGAGGAGTaGAGTACAACATCCTCCATG +
Preference number: 4 (lower is better)
Translates to: CMPAALSHSGSQNFYGSFTLREE*STTSSM
Trigger: CATGGAGGATGTTGTACTTCACTCCTCTCTGAGGGT...AAAGCTGCCATAGAAATTCTGTGAACCAGAATGAGACAAGGCAGCAGGCATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR GCA 90 bp AGCTTCTGTATTCCTAGACACCCTCAGAGAGGAGTGAAGTACAACATCCTCCATTGGTCTTCTTCTTTTTaGGCCGCAGGGCAAAGTACT +
Preference number: 4 (lower is better)
Translates to: SFCIPRHPQRGVKYNILHWSSSF*AAGQST
Trigger: AGTACTTTGCCCTGCGGCGCAAAAAGAAGAAGACCA...ATGGAGGATGTTGTACTTCACTCCTCTCTGAGGGTGTCTAGGAATACAGAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR GCA 90 bp TTAGTTTTCACATCACATGGGGCTAGGAGGCTGGACAGTTTCCTAGGAATTCAAAGGGGTTATAGCAGGTaGTGCTCATGGCAAACCAGT +
Preference number: 4 (lower is better)
Translates to: LVFTSHGARRLDSFLGIQRGYSR*CSWQTS
Trigger: ACTGGTTTGCCATGAGCAGCACCTGCTATAACCCCT...TTGAATTCCTAGGAAACTGTCCAGCCTCCTAGCCCCATGTGATGTGAAAACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR GCA 90 bp ATGGGAATTTATGAACACATGTCTAGTTGGTGGTGCCTTTTAGTTTTCACATCAGGGGGCAGTTCTGTCTaGGTGGTGACAGGCTTCACC +
Preference number: 4 (lower is better)
Translates to: MGIYEHMSSWWCLLVFTSGGSSV*VVTGFT
Trigger: GGTGAAGCCTGTCACCACGCAGACAGAACTGCCCCC...TGATGTGAAAACTAAAAGGCACCACCAACTAGACATGTGTTCATAAATTCCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR CCA 90 bp GGCTTGGCTAAGCTACGATGTTCAGTAGGTTGGGTGTATTCAATGCATTTTCAAAGCAGGTGCTGCTCATaGCAAACCAGTGGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: GLAKLRCSVGWVYSMHFQSRCCS*QTSGRQ
Trigger: TTGCCTTCCACTGGTTTGCCATGAGCAGCACCTGCT...TTGAAAATGCATTGAATACACCCAACCTACTGAACATCGTAGCTTAGCCAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR TCA 90 bp CTGGATATTGCTAGGCCACTGAAGACTTATGATTCATCATGGCCCAGTGACTCCGTGTTTCCAGCACTCTaGAGATCATGTGTGAGAATA +
Preference number: 4 (lower is better)
Translates to: LDIARPLKTYDSSWPSDSVFPAL*RSCVRI
Trigger: TATTCTCACACATGATCTTCAGAGTGCTGGAAACAC...GGAGTCACTGGGCCATGATGAATCATAAGTCTTCAGTGGCCTAGCAATATCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR TCA 90 bp GGCTTGGCTAAGCTACGATGTTCAGTAGGTTGGGTGTATTCAATGCATTTTCAAGATAGCATGTGGGAGTaGAAAGAACGTAGCCATGGT +
Preference number: 4 (lower is better)
Translates to: GLAKLRCSVGWVYSMHFQDSMWE*KERSHG
Trigger: ACCATGGCTACGTTCTTTTCACTCCCACATGCTATC...TTGAAAATGCATTGAATACACCCAACCTACTGAACATCGTAGCTTAGCCAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR TCA 90 bp TCAAGAGTCCTACAGCTTCTGCAGGAGTGTGTTTCCAGCACTCTGAAGATCATGATAAGTACAGGCACATaGGCCATTTGTCCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: SRVLQLLQECVSSTLKIMISTGT*AICPEK
Trigger: TTTTTCAGGACAAATGGCTCATGTGCCTGTACTTAT...CATGATCTTCAGAGTGCTGGAAACACACTCCTGCAGAAGCTGTAGGACTCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR CCA 90 bp TCAAGAGTCCTACAGCTTCTGCAGGAGTGTGTTTCCAGCACTCTGAAGATCATGGGAATGAGATTTCTCTaGCAAGTTAGACCCTTAAGA +
Preference number: 4 (lower is better)
Translates to: SRVLQLLQECVSSTLKIMGMRFL*QVRPLR
Trigger: TCTTAAGGGTCTAACTTGCCAGAGAAATCTCATTCC...CATGATCTTCAGAGTGCTGGAAACACACTCCTGCAGAAGCTGTAGGACTCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR CCA 90 bp TCAACTCTTCTGGTGGACACCCCTGGGAAAGGTACCCCTGTTTCTGTTAATCATTGCCTTGTCTCATTCTaGTTCACAGAATTTCTATGG +
Preference number: 4 (lower is better)
Translates to: STLLVDTPGKGTPVSVNHCLVSF*FTEFLW
Trigger: CCATAGAAATTCTGTGAACCAGAATGAGACAAGGCA...ATGATTAACAGAAACAGGGGTACCTTTCCCAGGGGTGTCCACCAGAAGAGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR CCA 90 bp CTACAGCTTCTGCAGGAGTGTGTTTCCAGCACTCTGAAGATCATGTGTGAGAATCACATGTCTAGTTGGTaGTGCCTTTTAGTTTTCACA +
Preference number: 4 (lower is better)
Translates to: LQLLQECVSSTLKIMCENHMSSW*CLLVFT
Trigger: TGTGAAAACTAAAAGGCACCACCAACTAGACATGTG...ATTCTCACACATGATCTTCAGAGTGCTGGAAACACACTCCTGCAGAAGCTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp TTTGGACTTACGATGGGTTTATTGAGATGTAAGTCAAGGAGCTTCTGTATTCCTCTTCAACTCTTCTGGTaGACACCCCTGGGAAAGGTA +
Preference number: 4 (lower is better)
Translates to: FGLTMGLLRCKSRSFCIPLQLFW*TPLGKV
Trigger: TACCTTTCCCAGGGGTGTCCACCAGAAGAGTTGAAG...AGGAATACAGAAGCTCCTTGACTTACATCTCAATAAACCCATCGTAAGTCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR CCA 90 bp TTAGTTTTCACATCACATGGGGCTAGGAGGCTGGACAGTTTCCTAGGAATTCAAGAACACATGTCTAGTTaGTGGTGCCTTTTAGTTTTC +
Preference number: 4 (lower is better)
Translates to: LVFTSHGARRLDSFLGIQEHMSS*WCLLVF
Trigger: GAAAACTAAAAGGCACCACCAACTAGACATGTGTTC...TTGAATTCCTAGGAAACTGTCCAGCCTCCTAGCCCCATGTGATGTGAAAACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp TCAACTCTTCTGGTGGACACCCCTGGGAAAGGTACCCCTGTTTCTGTTAATCATGTTATCACAAATGGATaGGATAAGAGAGTGATTTTG +
Preference number: 4 (lower is better)
Translates to: STLLVDTPGKGTPVSVNHVITNG*DKRVIL
Trigger: CAAAATCACTCTCTTATCCCATCCATTTGTGATAAC...ATGATTAACAGAAACAGGGGTACCTTTCCCAGGGGTGTCCACCAGAAGAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR CCA 90 bp CTTTCTAGACAGCTTGGGAGGATGAGGTGTCTAAGCACAATTACTTCCAGCATAAAAACAATCAGTCCCTaGAATGAGATTTCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: LSRQLGRMRCLSTITSSIKTISP*NEISLA
Trigger: TGCCAGAGAAATCTCATTCCAGGGACTGATTGTTTT...TATGCTGGAAGTAATTGTGCTTAGACACCTCATCCTCCCAAGCTGTCTAGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR CAA 72 bp CACACATGCACACAATCACACACACGAAGGAAAATGTaGCAAATAGAGCCACAGCATGTTCACAGATGTTAT +
Preference number: 4 (lower is better)
Translates to: HTCTQSHTRRKM*QIEPQHVHRCY
Trigger: ATAACATCTGTGAACATGCTGTGGCTCTATTTGCAACATTTTCCTTCGTGTGTGTGATTGTGTGCATGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR CAA 72 bp GCTAATATAAGTGTTCTCAGAGCATTTAAGGTAGGCTaGGCTAAGCTACGATGTTCAGTAGGTTGGGTGTAT +
Preference number: 4 (lower is better)
Translates to: ANISVLRAFKVG*AKLRCSVGWVY
Trigger: ATACACCCAACCTACTGAACATCGTAGCTTAGCCAAGCCTACCTTAAATGCTCTGAGAACACTTATATTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR TCA 90 bp ATGGGAATTTATGAACACATGTCTAGTTGGTGGTGCCTTTTAGTTTTCACATCATTCTTGAAGATGACATaGCAGACCAGGACGTTGCCA +
Preference number: 4 (lower is better)
Translates to: MGIYEHMSSWWCLLVFTSFLKMT*QTRTLP
Trigger: TGGCAACGTCCTGGTCTGTCATGTCATCTTCAAGAA...TGATGTGAAAACTAAAAGGCACCACCAACTAGACATGTGTTCATAAATTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR TCA 90 bp ATGGGAATTTATGAACACATGTCTAGTTGGTGGTGCCTTTTAGTTTTCACATCAGATAGCATGTGGGAGTaGAAAGAACGTAGCCATGGT +
Preference number: 4 (lower is better)
Translates to: MGIYEHMSSWWCLLVFTSDSMWE*KERSHG
Trigger: ACCATGGCTACGTTCTTTTCACTCCCACATGCTATC...TGATGTGAAAACTAAAAGGCACCACCAACTAGACATGTGTTCATAAATTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp CTTTCTAGACAGCTTGGGAGGATGAGGTGTCTAAGCACAATTACTTCCAGCATATTCACAGAATTTCTATaGCAGCTTTCAGATGAAACC +
Preference number: 4 (lower is better)
Translates to: LSRQLGRMRCLSTITSSIFTEFL*QLSDET
Trigger: GGTTTCATCTGAAAGCTGCCATAGAAATTCTGTGAA...TATGCTGGAAGTAATTGTGCTTAGACACCTCATCCTCCCAAGCTGTCTAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR CCA 90 bp CTTTCTAGACAGCTTGGGAGGATGAGGTGTCTAAGCACAATTACTTCCAGCATACCAGTGTTTCTTAGATaGGAATTTATGAACACATGT +
Preference number: 4 (lower is better)
Translates to: LSRQLGRMRCLSTITSSIPVFLR*EFMNTC
Trigger: ACATGTGTTCATAAATTCCCATCTAAGAAACACTGG...TATGCTGGAAGTAATTGTGCTTAGACACCTCATCCTCCCAAGCTGTCTAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
3UTR CAA 72 bp GCAATAATAATTTCCCTTTGTTTTAAGGAACCCAAGTaGGTCCTTTCTTATCTGGATATTGCTAGGCCACTG +
Preference number: 4 (lower is better)
Translates to: AIIISLCFKEPK*VLSYLDIARPL
Trigger: CAGTGGCCTAGCAATATCCAGATAAGAAAGGACCAACTTGGGTTCCTTAAAACAAAGGGAAATTATTATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR GCA 90 bp TTTGGACTTACGATGGGTTTATTGAGATGTAAGTCAAGGAGCTTCTGTATTCCTATGTCTAGTTGGTGGTaGCTTTTAGTTTTCACATCA +
Preference number: 4 (lower is better)
Translates to: FGLTMGLLRCKSRSFCIPMSSWW*LLVFTS
Trigger: TGATGTGAAAACTAAAAGGCACCACCAACTAGACAT...AGGAATACAGAAGCTCCTTGACTTACATCTCAATAAACCCATCGTAAGTCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR CCA 90 bp ATGGGAATTTATGAACACATGTCTAGTTGGTGGTGCCTTTTAGTTTTCACATCACACATGTCTAGTTGGTaGTGCCTTTTAGTTTTCACA +
Preference number: 4 (lower is better)
Translates to: MGIYEHMSSWWCLLVFTSHMSSW*CLLVFT
Trigger: TGTGAAAACTAAAAGGCACCACCAACTAGACATGTG...TGATGTGAAAACTAAAAGGCACCACCAACTAGACATGTGTTCATAAATTCCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CCA 90 bp TTTGGACTTACGATGGGTTTATTGAGATGTAAGTCAAGGAGCTTCTGTATTCCTCGATGTTCAGTAGGTTaGGTGTATTCAATGCATTTT +
Preference number: 4 (lower is better)
Translates to: FGLTMGLLRCKSRSFCIPRCSVG*VYSMHF
Trigger: AAAATGCATTGAATACACCCAACCTACTGAACATCG...AGGAATACAGAAGCTCCTTGACTTACATCTCAATAAACCCATCGTAAGTCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS CCA 90 bp ACGGCCAGGGCCGCCTCCGCGCTCTGCTCGTCGGCCCGGCCCTCGTaGGGCTCGGTGGCTCGCACCAAGGGGAGGAGACAGAGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: TARAASALCSSARPS*GSVARTKGRRQSSK
Trigger: CTTGCTGCTCTGTCTCCTCCCCTTGGTGCGAGCCACCGAGCCCCACGAGGGCCGGGCCGACGAGCAGAGCGCGGAGGCGGCCCTGGCCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS GCA 90 bp AAGAAGTGCGAGGCATTGGGCACGGCCAGGGCCGCCTCCGCGCTCTaGTCGTCGGCCCGGCCCTCGTGGGGCTCGGTGGCTCGCACCAAG +
Preference number: 5 (lower is better)
Translates to: KKCEALGTARAASAL*SSARPSWGSVARTK
Trigger: CTTGGTGCGAGCCACCGAGCCCCACGAGGGCCGGGCCGACGAGCAGAGCGCGGAGGCGGCCCTGGCCGTGCCCAATGCCTCGCACTTCTT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS CCA 90 bp CCGCCTCCGCGCTCTGCTCGTCGGCCCGGCCCTCGTGGGGCTCGGTaGCTCGCACCAAGGGGAGGAGACAGAGCAGCAAGAGGTGAGGGA +
Preference number: 5 (lower is better)
Translates to: PPPRSARRPGPRGAR*LAPRGGDRAARGEG
Trigger: TCCCTCACCTCTTGCTGCTCTGTCTCCTCCCCTTGGTGCGAGCCACCGAGCCCCACGAGGGCCGGGCCGACGAGCAGAGCGCGGAGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CAA 90 bp GTCCTCGCTCCTCTTCCTCAGAGATACAGGCTGCTGTGCCTCCCAGTGTTTCTTAAGAAGTGCGAGGCATaGGGCACGGCCAGGGCCGCC +
Preference number: 5 (lower is better)
Translates to: VLAPLPQRYRLLCLPVFLKKCEA*GTARAA
Trigger: GGCGGCCCTGGCCGTGCCCAATGCCTCGCACTTCTT...AAGAAACACTGGGAGGCACAGCAGCCTGTATCTCTGAGGAAGAGGAGCGAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CAA 90 bp GAGAATAGGCTCTCTTTCCCTGCCTCAGGTGGAGACAGACCCCTCCCACTCCCTGTGGGCAGGAGGTTATaGGCAAGGGGAGCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: ENRLSFPASGGDRPLPLPVGRRL*ARGALW
Trigger: CCAGAGGGCTCCCCTTGCCAATAACCTCCTGCCCAC...AGGGAGTGGGAGGGGTCTGTCTCCACCTGAGGCAGGGAAAGAGAGCCTATTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS GCA 90 bp GGGCTTTCACCGTGGGGTTCTGGGACTCAGCGCCGTAGCGCCTCCTaGCCACAAAGTTCTGCCAGTCGGAGAAGGTGTAGTTGTTCCAAG +
Preference number: 5 (lower is better)
Translates to: GLSPWGSGTQRRSAS*PQSSASRRRCSCSK
Trigger: CTTGGAACAACTACACCTTCTCCGACTGGCAGAACTTTGTGGGCAGGAGGCGCTACGGCGCTGAGTCCCAGAACCCCACGGTGAAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CAA 90 bp GAGAATAGGCTCTCTTTCCCTGCCTCAGGTGGAGACAGACCCCTCCCACTCCCTCCATCTGGGCCAACGTaGTCCTCGCTCCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: ENRLSFPASGGDRPLPLPPSGPT*SSLLFL
Trigger: GAGGAAGAGGAGCGAGGACAACGTTGGCCCAGATGG...AGGGAGTGGGAGGGGTCTGTCTCCACCTGAGGCAGGGAAAGAGAGCCTATTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CAA 90 bp TTCAGCCCCCATCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTCAGAGATACAGTTGGTGCGGATGACCTaGCTGGACAGGAGGAGGACG +
Preference number: 5 (lower is better)
Translates to: FSPHLGQRCPRSSSSEIQLVRMT*LDRRRT
Trigger: CGTCCTCCTCCTGTCCAGCAAGGTCATCCGCACCAA...CTGTATCTCTGAGGAAGAGGAGCGAGGACAACGTTGGCCCAGATGGGGGCTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CAA 90 bp CTGCCCCACAGATGGAGGCAGTTGAATGATTCAGCCCCCATCTGGGCCAACGTTCTTCCCAGACTGGAGTaGGGAGGTGGGCAGGAGGTT +
Preference number: 5 (lower is better)
Translates to: LPHRWRQLNDSAPIWANVLPRLE*GGGQEV
Trigger: AACCTCCTGCCCACCTCCCAACTCCAGTCTGGGAAG...AACGTTGGCCCAGATGGGGGCTGAATCATTCAACTGCCTCCATCTGTGGGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS CCA 90 bp ACAATGGGTTCCACAGATGACAGGTCTGTCTTCCCAGACTGGAGTTaGGAGGTGGGCAGGAGGTTATTGGCAAGGGGAGCCCTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: TMGSTDDRSVFPDWS*EVGRRLLARGALWP
Trigger: TGGCCAGAGGGCTCCCCTTGCCAATAACCTCCTGCCCACCTCCCAACTCCAGTCTGGGAAGACAGACCTGTCATCTGTGGAACCCATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CAA 90 bp AAAGTGAGGCATAAAAATCTCCACGCCCGCTCTGGCTTGCTGGCATTTCCCTGGGTGGGCAGGAGGTTATaGGCAAGGGGAGCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: KVRHKNLHARSGLLAFPWVGRRL*ARGALW
Trigger: CCAGAGGGCTCCCCTTGCCAATAACCTCCTGCCCAC...CCAGGGAAATGCCAGCAAGCCAGAGCGGGCGTGGAGATTTTTATGCCTCACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CAA 90 bp ATGTGTGAGAATAGGCTCTCTTTCCCTGCCTCAGGTGGAGACAGACCCCTCCCATCGGCAACTGCCAGGTaGACGATGAAGAGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: MCENRLSFPASGGDRPLPSATAR*TMKRLV
Trigger: CACCAGCCTCTTCATCGTCAACCTGGCAGTTGCCGA...TGGGAGGGGTCTGTCTCCACCTGAGGCAGGGAAAGAGAGCCTATTCTCACACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CAA 90 bp ATCCTCCATGCTTCCCAGAGCAGGACAAACCTTCTGTATGCCTGCTGCCTTGTCCCATCTGGGCCAACGTaGTCCTCGCTCCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: ILHASQSRTNLLYACCLVPSGPT*SSLLFL
Trigger: GAGGAAGAGGAGCGAGGACAACGTTGGCCCAGATGG...GACAAGGCAGCAGGCATACAGAAGGTTTGTCCTGCTCTGGGAAGCATGGAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS GCA 90 bp CAAAGTGAAGGGGGTGTTGAGCAGCGTGATCATTATGTCGGCAACTaGCAGGTTGACGATGAAGAGGCTGGTGGCCGAGTGCATTCGCTG +
Preference number: 5 (lower is better)
Translates to: QSEGGVEQRDHYVGN*QVDDEEAGGRVHSL
Trigger: CAGCGAATGCACTCGGCCACCAGCCTCTTCATCGTCAACCTGGCAGTTGCCGACATAATGATCACGCTGCTCAACACCCCCTTCACTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CAA 90 bp CTACAGCTTCTGCAGGAGTGTGTTTCCAGCACTCTGAAGATCATGTGTGAGAATAAGAAGTGCGAGGCATaGGGCACGGCCAGGGCCGCC +
Preference number: 5 (lower is better)
Translates to: LQLLQECVSSTLKIMCENKKCEA*GTARAA
Trigger: GGCGGCCCTGGCCGTGCCCAATGCCTCGCACTTCTT...ATTCTCACACATGATCTTCAGAGTGCTGGAAACACACTCCTGCAGAAGCTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CAA 90 bp CTACAGCTTCTGCAGGAGTGTGTTTCCAGCACTCTGAAGATCATGTGTGAGAATCACGCCCGCTCTGGCTaGCTGGCATTTCCCTGGCCC +
Preference number: 5 (lower is better)
Translates to: LQLLQECVSSTLKIMCENHARSG*LAFPWP
Trigger: GGGCCAGGGAAATGCCAGCAAGCCAGAGCGGGCGTG...ATTCTCACACATGATCTTCAGAGTGCTGGAAACACACTCCTGCAGAAGCTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS CCA 90 bp GCAATGGCTGTCAGTGTCAGTGCTGAGACGTGCAGTGAGCAGTACTaGGCAAAGCGGCTGACATGGCACATGCCCTTCCCAAATATCCAT +
Preference number: 5 (lower is better)
Translates to: AMAVSVSAETCSEQY*AKRLTWHMPFPNIH
Trigger: ATGGATATTTGGGAAGGGCATGTGCCATGTCAGCCGCTTTGCCCAGTACTGCTCACTGCACGTCTCAGCACTGACACTGACAGCCATTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS CCA 90 bp CCCTCCCACTCCCTCTTCCCAACCTCTTCTAACTCATCGTCACAATaGGTTCCACAGATGACAGGTCTGTCTTCCCAGACTGGAGTTGGG +
Preference number: 5 (lower is better)
Translates to: PSHSLFPTSSNSSSQ*VPQMTGLSSQTGVG
Trigger: CCCAACTCCAGTCTGGGAAGACAGACCTGTCATCTGTGGAACCCATTGTGACGATGAGTTAGAAGAGGTTGGGAAGAGGGAGTGGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CAA 90 bp CCTAGGAATTCAAGAGTCCTACAGCTTCTGCAGGAGTGTGTTTCCAGCACTCTGCTTCCCAGACTGGAGTaGGGAGGTGGGCAGGAGGTT +
Preference number: 5 (lower is better)
Translates to: PRNSRVLQLLQECVSSTLLPRLE*GGGQEV
Trigger: AACCTCCTGCCCACCTCCCAACTCCAGTCTGGGAAG...CAGAGTGCTGGAAACACACTCCTGCAGAAGCTGTAGGACTCTTGAATTCCTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CAA 90 bp CAGTTGAATGATTCAGCCCCCATCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTCACAGATGGAGGCAGTaGAATGATTCAGCCCCCATC +
Preference number: 5 (lower is better)
Translates to: QLNDSAPIWANVVLAPLPHRWRQ*NDSAPI
Trigger: GATGGGGGCTGAATCATTCAACTGCCTCCATCTGTG...AGGAAGAGGAGCGAGGACAACGTTGGCCCAGATGGGGGCTGAATCATTCAACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS TCA 90 bp GTGTCAGTGCTGAGACGTGCAGTGAGCAGTACTGGGCAAAGCGGCTaGCATGGCACATGCCCTTCCCAAATATCCATGTGCTGTTCACAA +
Preference number: 5 (lower is better)
Translates to: VSVLRRAVSSTGQSG*HGTCPSQISMCCSQ
Trigger: TTGTGAACAGCACATGGATATTTGGGAAGGGCATGTGCCATGTCAGCCGCTTTGCCCAGTACTGCTCACTGCACGTCTCAGCACTGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS TCA 90 bp AGCCATGGTCCAGATGACAGCGATGTAGATGACACCCTTTGTGATTaGGATCCGGGGTTTCAAGGGGTGCATGATGACCTGGTGGCGATC +
Preference number: 5 (lower is better)
Translates to: SHGPDDSDVDDTLCD*DPGFQGVHDDLVAI
Trigger: GATCGCCACCAGGTCATCATGCACCCCTTGAAACCCCGGATCTCAATCACAAAGGGTGTCATCTACATCGCTGTCATCTGGACCATGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS TCA 90 bp TCTTCCCAACCTCTTCTAACTCATCGTCACAATGGGTTCCACAGATaGCAGGTCTGTCTTCCCAGACTGGAGTTGGGAGGTGGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: SSQPLLTHRHNGFHR*QVCLPRLELGGGQE
Trigger: CTCCTGCCCACCTCCCAACTCCAGTCTGGGAAGACAGACCTGTCATCTGTGGAACCCATTGTGACGATGAGTTAGAAGAGGTTGGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS CCA 90 bp AGTGCTGAGACGTGCAGTGAGCAGTACTGGGCAAAGCGGCTGACATaGCACATGCCCTTCCCAAATATCCATGTGCTGTTCACAAAGCGA +
Preference number: 5 (lower is better)
Translates to: SAETCSEQYWAKRLT*HMPFPNIHVLFTKR
Trigger: TCGCTTTGTGAACAGCACATGGATATTTGGGAAGGGCATGTGCCATGTCAGCCGCTTTGCCCAGTACTGCTCACTGCACGTCTCAGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR CAA 90 bp CAGCAGCTGCCCCACAGATGGAGGCAGTTGAATGATTCAGCCCCCATCTGGGCCACCACCAAAATGATGTaGACAGCGAATCTCCTTTTG +
Preference number: 5 (lower is better)
Translates to: QQLPHRWRQLNDSAPIWATTKMM*TANLLL
Trigger: CAAAAGGAGATTCGCTGTCAACATCATTTTGGTGGT...GGCCCAGATGGGGGCTGAATCATTCAACTGCCTCCATCTGTGGGGCAGCTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS TCA 90 bp GGAACCAGCAGAGGGCAAAGAGGACTACCACCAGCATCAACATCTTaGTGGTCTTCTTCTTTTTGCGCCGCAGGGCAAAGTACTGCTCTG +
Preference number: 5 (lower is better)
Translates to: GTSRGQRGLPPASTS*WSSSFCAAGQSTAL
Trigger: CAGAGCAGTACTTTGCCCTGCGGCGCAAAAAGAAGAAGACCATCAAGATGTTGATGCTGGTGGTAGTCCTCTTTGCCCTCTGCTGGTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CAA 90 bp TTGCAGGAGAGAAGGAATCATGCCTCCTGGTTGAGTTTGATTCCCTGGTTCATCTCGGCAACTGCCAGGTaGACGATGAAGAGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: LQERRNHASWLSLIPWFISATAR*TMKRLV
Trigger: CACCAGCCTCTTCATCGTCAACCTGGCAGTTGCCGA...GATGAACCAGGGAATCAAACTCAACCAGGAGGCATGATTCCTTCTCTCCTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR CAA 90 bp TCTACAATAGGGGGCAGTTCTGTCTGCGTGGTGACAGGCTTCACCTTGGGATCTATGGTCTTCTTCTTTTaGCGCCGCAGGGCAAAGTAC +
Preference number: 5 (lower is better)
Translates to: STIGGSSVCVVTGFTLGSMVFFF*RRRAKY
Trigger: GTACTTTGCCCTGCGGCGCAAAAAGAAGAAGACCAT...AGATCCCAAGGTGAAGCCTGTCACCACGCAGACAGAACTGCCCCCTATTGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR CAA 90 bp CTACAGCTTCTGCAGGAGTGTGTTTCCAGCACTCTGAAGATCATGTGTGAGAATTTGGTGCGGATGACCTaGCTGGACAGGAGGAGGACG +
Preference number: 5 (lower is better)
Translates to: LQLLQECVSSTLKIMCENLVRMT*LDRRRT
Trigger: CGTCCTCCTCCTGTCCAGCAAGGTCATCCGCACCAA...ATTCTCACACATGATCTTCAGAGTGCTGGAAACACACTCCTGCAGAAGCTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS TCA 90 bp AGCCATGGTCCAGATGACAGCGATGTAGATGACACCCTTTGTGATTaGGATCCGGGGTTTCAAGGGGTGCATGATGACCAAAGTGAAGGG +
Preference number: 5 (lower is better)
Translates to: SHGPDDSDVDDTLCD*DPGFQGVHDDQSEG
Trigger: CCCTTCACTTTGGTCATCATGCACCCCTTGAAACCCCGGATCTCAATCACAAAGGGTGTCATCTACATCGCTGTCATCTGGACCATGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539203.2
CDS-3UTR CAA 90 bp GAGAATAGGCTCTCTTTCCCTGCCTCAGGTGGAGACAGACCCCTCCCACTCCCTTTTAAGGAACCCAAGTaGGTCCTTTCTTATCTGGAT +
Preference number: 5 (lower is better)
Translates to: ENRLSFPASGGDRPLPLPFKEPK*VLSYLD
Trigger: ATCCAGATAAGAAAGGACCAACTTGGGTTCCTTAAA...AGGGAGTGGGAGGGGTCTGTCTCCACCTGAGGCAGGGAAAGAGAGCCTATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CAA 90 bp TTCAGCCCCCATCTGGGCCAACGTTGTCCTCGCTCCTCTTCCTCAGAGATACAGACACGAAGGAAAATGTaGCAAATAGAGCCACAGCAT +
Preference number: 5 (lower is better)
Translates to: FSPHLGQRCPRSSSSEIQTRRKM*QIEPQH
Trigger: ATGCTGTGGCTCTATTTGCAACATTTTCCTTCGTGT...CTGTATCTCTGAGGAAGAGGAGCGAGGACAACGTTGGCCCAGATGGGGGCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS TCA 90 bp AAGAGGCTGGTGGCCGAGTGCATTCGCTGGTTCTTGAAGATGACATaGCAGACCAGGACGTTGCCAAAGAGTGAGAAGACAATGATGAAG +
Preference number: 5 (lower is better)
Translates to: KRLVAECIRWFLKMT*QTRTLPKSEKTMMK
Trigger: CTTCATCATTGTCTTCTCACTCTTTGGCAACGTCCTGGTCTGTCATGTCATCTTCAAGAACCAGCGAATGCACTCGGCCACCAGCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CAA 90 bp ATGGGAATTTATGAACACATGTCTAGTTGGTGGTGCCTTTTAGTTTTCACATCACACGCCCGCTCTGGCTaGCTGGCATTTCCCTGGCCC +
Preference number: 5 (lower is better)
Translates to: MGIYEHMSSWWCLLVFTSHARSG*LAFPWP
Trigger: GGGCCAGGGAAATGCCAGCAAGCCAGAGCGGGCGTG...TGATGTGAAAACTAAAAGGCACCACCAACTAGACATGTGTTCATAAATTCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CAA 90 bp TCAAGAGTCCTACAGCTTCTGCAGGAGTGTGTTTCCAGCACTCTGAAGATCATGGTGACAGGCTTCACCTaGGGATCTTCTCACCTCTTC +
Preference number: 5 (lower is better)
Translates to: SRVLQLLQECVSSTLKIMVTGFT*GSSHLF
Trigger: GAAGAGGTGAGAAGATCCCAAGGTGAAGCCTGTCAC...CATGATCTTCAGAGTGCTGGAAACACACTCCTGCAGAAGCTGTAGGACTCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR CAA 90 bp TCAAGAGTCCTACAGCTTCTGCAGGAGTGTGTTTCCAGCACTCTGAAGATCATGATGGTCTTCTTCTTTTaGCGCCGCAGGGCAAAGTAC +
Preference number: 5 (lower is better)
Translates to: SRVLQLLQECVSSTLKIMMVFFF*RRRAKY
Trigger: GTACTTTGCCCTGCGGCGCAAAAAGAAGAAGACCAT...CATGATCTTCAGAGTGCTGGAAACACACTCCTGCAGAAGCTGTAGGACTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CAA 90 bp CTACAGCTTCTGCAGGAGTGTGTTTCCAGCACTCTGAAGATCATGTGTGAGAATCACAGATGGAGGCAGTaGAATGATTCAGCCCCCATC +
Preference number: 5 (lower is better)
Translates to: LQLLQECVSSTLKIMCENHRWRQ*NDSAPI
Trigger: GATGGGGGCTGAATCATTCAACTGCCTCCATCTGTG...ATTCTCACACATGATCTTCAGAGTGCTGGAAACACACTCCTGCAGAAGCTGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CAA 90 bp ATGTGTGAGAATAGGCTCTCTTTCCCTGCCTCAGGTGGAGACAGACCCCTCCCATTTAAGGAACCCAAGTaGGTCCTTTCTTATCTGGAT +
Preference number: 5 (lower is better)
Translates to: MCENRLSFPASGGDRPLPFKEPK*VLSYLD
Trigger: ATCCAGATAAGAAAGGACCAACTTGGGTTCCTTAAA...TGGGAGGGGTCTGTCTCCACCTGAGGCAGGGAAAGAGAGCCTATTCTCACACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CAA 90 bp TCAAGAGTCCTACAGCTTCTGCAGGAGTGTGTTTCCAGCACTCTGAAGATCATGGCCTCCTGGTTGAGTTaGATTCCCTGGTTCATCTTG +
Preference number: 5 (lower is better)
Translates to: SRVLQLLQECVSSTLKIMASWLS*IPWFIL
Trigger: CAAGATGAACCAGGGAATCAAACTCAACCAGGAGGC...CATGATCTTCAGAGTGCTGGAAACACACTCCTGCAGAAGCTGTAGGACTCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR CAA 90 bp TCAAGAGTCCTACAGCTTCTGCAGGAGTGTGTTTCCAGCACTCTGAAGATCATGTGTATGCCTGCTGCCTaGTCTCATTCTGGTTCACAG +
Preference number: 5 (lower is better)
Translates to: SRVLQLLQECVSSTLKIMCMPAA*SHSGSQ
Trigger: CTGTGAACCAGAATGAGACAAGGCAGCAGGCATACA...CATGATCTTCAGAGTGCTGGAAACACACTCCTGCAGAAGCTGTAGGACTCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS GCA 90 bp AACATCTTGATGGTCTTCTTCTTTTTGCGCCGCAGGGCAAAGTACTaGTCTGTGGTCACATCGCCAATCATATTACACAGCCACAGTTTC +
Preference number: 5 (lower is better)
Translates to: NILMVFFFLRRRAKY*SVVTSPIILHSHSF
Trigger: GAAACTGTGGCTGTGTAATATGATTGGCGATGTGACCACAGAGCAGTACTTTGCCCTGCGGCGCAAAAAGAAGAAGACCATCAAGATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS-3UTR CAA 90 bp CTTTCTAGACAGCTTGGGAGGATGAGGTGTCTAAGCACAATTACTTCCAGCATAAAAGTGAAGGGGGTGTaGAGCAGCGTGATCATTATG +
Preference number: 5 (lower is better)
Translates to: LSRQLGRMRCLSTITSSIKVKGV*SSVIIM
Trigger: CATAATGATCACGCTGCTCAACACCCCCTTCACTTT...TATGCTGGAAGTAATTGTGCTTAGACACCTCATCCTCCCAAGCTGTCTAGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR CAA 90 bp TGTATGCCTGCTGCCTTGTCTCATTCTGGTTCACAGAATTTCTATGGCAGCTTTAATCATGCCTCCTGGTaGAGTTTGATTCCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: CMPAALSHSGSQNFYGSFNHASW*SLIPWF
Trigger: GAACCAGGGAATCAAACTCAACCAGGAGGCATGATT...AAAGCTGCCATAGAAATTCTGTGAACCAGAATGAGACAAGGCAGCAGGCATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR CAA 90 bp CTACAGCTTCTGCAGGAGTGTGTTTCCAGCACTCTGAAGATCATGTGTGAGAATCACCACCACTTGTTTTaGTGCAATTGCAGGAGAGAA +
Preference number: 5 (lower is better)
Translates to: LQLLQECVSSTLKIMCENHHHLF*CNCRRE
Trigger: TTCTCTCCTGCAATTGCACAAAAACAAGTGGTGGTG...ATTCTCACACATGATCTTCAGAGTGCTGGAAACACACTCCTGCAGAAGCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR CAA 90 bp TCAACTCTTCTGGTGGACACCCCTGGGAAAGGTACCCCTGTTTCTGTTAATCATATGTTTCACCACCACTaGTTTTTGTGCAATTGCAGG +
Preference number: 5 (lower is better)
Translates to: STLLVDTPGKGTPVSVNHMFHHH*FLCNCR
Trigger: CCTGCAATTGCACAAAAACAAGTGGTGGTGAAACAT...ATGATTAACAGAAACAGGGGTACCTTTCCCAGGGGTGTCCACCAGAAGAGTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR CAA 90 bp AGCTTCTGTATTCCTAGACACCCTCAGAGAGGAGTGAAGTACAACATCCTCCATGCATTTAAGGTAGGCTaGGCTAAGCTACGATGTTCA +
Preference number: 5 (lower is better)
Translates to: SFCIPRHPQRGVKYNILHAFKVG*AKLRCS
Trigger: TGAACATCGTAGCTTAGCCAAGCCTACCTTAAATGC...ATGGAGGATGTTGTACTTCACTCCTCTCTGAGGGTGTCTAGGAATACAGAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS-3UTR CAA 90 bp ATGGGAATTTATGAACACATGTCTAGTTGGTGGTGCCTTTTAGTTTTCACATCAATTACTTCCAGCATATaGGAAAGCCTGCTCCCTCAT +
Preference number: 5 (lower is better)
Translates to: MGIYEHMSSWWCLLVFTSITSSI*ESLLPH
Trigger: ATGAGGGAGCAGGCTTTCCAATATGCTGGAAGTAAT...TGATGTGAAAACTAAAAGGCACCACCAACTAGACATGTGTTCATAAATTCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS GCA 72 bp GAGGCATTGGGCACGGCCAGGGCCGCCTCCGCGCTCTaGTCGTCGGCCCGGCCCTCGTGGGGCTCGGTGGCT +
Preference number: 6 (lower is better)
Translates to: EALGTARAASAL*SSARPSWGSVA
Trigger: AGCCACCGAGCCCCACGAGGGCCGGGCCGACGAGCAGAGCGCGGAGGCGGCCCTGGCCGTGCCCAATGCCTC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS CCA 72 bp GCCGCCTCCGCGCTCTGCTCGTCGGCCCGGCCCTCGTaGGGCTCGGTGGCTCGCACCAAGGGGAGGAGACAG +
Preference number: 6 (lower is better)
Translates to: AASALCSSARPS*GSVARTKGRRQ
Trigger: CTGTCTCCTCCCCTTGGTGCGAGCCACCGAGCCCCACGAGGGCCGGGCCGACGAGCAGAGCGCGGAGGCGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS CCA 72 bp CGCTCTGCTCGTCGGCCCGGCCCTCGTGGGGCTCGGTaGCTCGCACCAAGGGGAGGAGACAGAGCAGCAAGA +
Preference number: 6 (lower is better)
Translates to: RSARRPGPRGAR*LAPRGGDRAAR
Trigger: TCTTGCTGCTCTGTCTCCTCCCCTTGGTGCGAGCCACCGAGCCCCACGAGGGCCGGGCCGACGAGCAGAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS CCA 72 bp GAGGTGGGCAGGAGGTTATTGGCAAGGGGAGCCCTCTaGCCATCATTCTTCTCTGTCCAGGCCACCCTGAAG +
Preference number: 6 (lower is better)
Translates to: EVGRRLLARGAL*PSFFSVQATLK
Trigger: CTTCAGGGTGGCCTGGACAGAGAAGAATGATGGCCAGAGGGCTCCCCTTGCCAATAACCTCCTGCCCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS CAA 90 bp AGGTCTGTCTTCCCAGACTGGAGTTGGGAGGTGGGCAGGAGGTTATaGGCAAGGGGAGCCCTCTGGCCATCATTCTTCTCTGTCCAGGCC +
Preference number: 6 (lower is better)
Translates to: RSVFPDWSWEVGRRL*ARGALWPSFFSVQA
Trigger: GGCCTGGACAGAGAAGAATGATGGCCAGAGGGCTCCCCTTGCCAATAACCTCCTGCCCACCTCCCAACTCCAGTCTGGGAAGACAGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS GCA 72 bp GGGGGTGTTGAGCAGCGTGATCATTATGTCGGCAACTaGCAGGTTGACGATGAAGAGGCTGGTGGCCGAGTG +
Preference number: 6 (lower is better)
Translates to: GGVEQRDHYVGN*QVDDEEAGGRV
Trigger: CACTCGGCCACCAGCCTCTTCATCGTCAACCTGGCAGTTGCCGACATAATGATCACGCTGCTCAACACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS CCA 72 bp GTCAGTGTCAGTGCTGAGACGTGCAGTGAGCAGTACTaGGCAAAGCGGCTGACATGGCACATGCCCTTCCCA +
Preference number: 6 (lower is better)
Translates to: VSVSAETCSEQY*AKRLTWHMPFP
Trigger: TGGGAAGGGCATGTGCCATGTCAGCCGCTTTGCCCAGTACTGCTCACTGCACGTCTCAGCACTGACACTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS CCA 72 bp TCCACAGATGACAGGTCTGTCTTCCCAGACTGGAGTTaGGAGGTGGGCAGGAGGTTATTGGCAAGGGGAGCC +
Preference number: 6 (lower is better)
Translates to: STDDRSVFPDWS*EVGRRLLARGA
Trigger: GGCTCCCCTTGCCAATAACCTCCTGCCCACCTCCCAACTCCAGTCTGGGAAGACAGACCTGTCATCTGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS CAA 90 bp AAGGGGGTGTTGAGCAGCGTGATCATTATGTCGGCAACTGCCAGGTaGACGATGAAGAGGCTGGTGGCCGAGTGCATTCGCTGGTTCTTG +
Preference number: 6 (lower is better)
Translates to: KGVLSSVIIMSATAR*TMKRLVAECIRWFL
Trigger: CAAGAACCAGCGAATGCACTCGGCCACCAGCCTCTTCATCGTCAACCTGGCAGTTGCCGACATAATGATCACGCTGCTCAACACCCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS TCA 72 bp CTGAGACGTGCAGTGAGCAGTACTGGGCAAAGCGGCTaGCATGGCACATGCCCTTCCCAAATATCCATGTGC +
Preference number: 6 (lower is better)
Translates to: LRRAVSSTGQSG*HGTCPSQISMC
Trigger: GCACATGGATATTTGGGAAGGGCATGTGCCATGTCAGCCGCTTTGCCCAGTACTGCTCACTGCACGTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS CAA 72 bp TTGAGCAGCGTGATCATTATGTCGGCAACTGCCAGGTaGACGATGAAGAGGCTGGTGGCCGAGTGCATTCGC +
Preference number: 6 (lower is better)
Translates to: LSSVIIMSATAR*TMKRLVAECIR
Trigger: GCGAATGCACTCGGCCACCAGCCTCTTCATCGTCAACCTGGCAGTTGCCGACATAATGATCACGCTGCTCAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS CCA 72 bp ACGTGCAGTGAGCAGTACTGGGCAAAGCGGCTGACATaGCACATGCCCTTCCCAAATATCCATGTGCTGTTC +
Preference number: 6 (lower is better)
Translates to: TCSEQYWAKRLT*HMPFPNIHVLF
Trigger: GAACAGCACATGGATATTTGGGAAGGGCATGTGCCATGTCAGCCGCTTTGCCCAGTACTGCTCACTGCACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS CAA 72 bp GTGCTGTTCACAAAGCGAACCAAAGTGAAGGGGGTGTaGAGCAGCGTGATCATTATGTCGGCAACTGCCAGG +
Preference number: 6 (lower is better)
Translates to: VLFTKRTKVKGV*SSVIIMSATAR
Trigger: CCTGGCAGTTGCCGACATAATGATCACGCTGCTCAACACCCCCTTCACTTTGGTTCGCTTTGTGAACAGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS CAA 72 bp TTCAAGGGGTGCATGATGACCAAAGTGAAGGGGGTGTaGAGCAGCGTGATCATTATGTCGGCAACTGCCAGG +
Preference number: 6 (lower is better)
Translates to: FKGCMMTKVKGV*SSVIIMSATAR
Trigger: CCTGGCAGTTGCCGACATAATGATCACGCTGCTCAACACCCCCTTCACTTTGGTCATCATGCACCCCTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539203.2
CDS CAA 90 bp GGGAACCAGCAGAGGGCAAAGAGGACTACCACCAGCATCAACATCTaGATGGTCTTCTTCTTTTTGCGCCGCAGGGCAAAGTACTGCTCT +
Preference number: 6 (lower is better)
Translates to: GNQQRAKRTTTSINI*MVFFFLRRRAKYCS
Trigger: AGAGCAGTACTTTGCCCTGCGGCGCAAAAAGAAGAAGACCATCAAGATGTTGATGCTGGTGGTAGTCCTCTTTGCCCTCTGCTGGTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS TCA 72 bp GTGGCCGAGTGCATTCGCTGGTTCTTGAAGATGACATaGCAGACCAGGACGTTGCCAAAGAGTGAGAAGACA +
Preference number: 6 (lower is better)
Translates to: VAECIRWFLKMT*QTRTLPKSEKT
Trigger: TGTCTTCTCACTCTTTGGCAACGTCCTGGTCTGTCATGTCATCTTCAAGAACCAGCGAATGCACTCGGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS TCA 72 bp CCAGATGACAGCGATGTAGATGACACCCTTTGTGATTaGGATCCGGGGTTTCAAGGGGTGCATGATGACCTG +
Preference number: 6 (lower is better)
Translates to: PDDSDVDDTLCD*DPGFQGVHDDL
Trigger: CAGGTCATCATGCACCCCTTGAAACCCCGGATCTCAATCACAAAGGGTGTCATCTACATCGCTGTCATCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243673.7
CDS TCA 72 bp CCTCTTCTAACTCATCGTCACAATGGGTTCCACAGATaGCAGGTCTGTCTTCCCAGACTGGAGTTGGGAGGT +
Preference number: 6 (lower is better)
Translates to: PLLTHRHNGFHR*QVCLPRLELGG
Trigger: ACCTCCCAACTCCAGTCTGGGAAGACAGACCTGTCATCTGTGGAACCCATTGTGACGATGAGTTAGAAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS CAA 72 bp CAGAGGGCAAAGAGGACTACCACCAGCATCAACATCTaGATGGTCTTCTTCTTTTTGCGCCGCAGGGCAAAG +
Preference number: 6 (lower is better)
Translates to: QRAKRTTTSINI*MVFFFLRRRAK
Trigger: CTTTGCCCTGCGGCGCAAAAAGAAGAAGACCATCAAGATGTTGATGCTGGTGGTAGTCCTCTTTGCCCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS CAA 90 bp AAGAGGACTACCACCAGCATCAACATCTTGATGGTCTTCTTCTTTTaGCGCCGCAGGGCAAAGTACTGCTCTGTGGTCACATCGCCAATC +
Preference number: 6 (lower is better)
Translates to: KRTTTSINILMVFFF*RRRAKYCSVVTSPI
Trigger: GATTGGCGATGTGACCACAGAGCAGTACTTTGCCCTGCGGCGCAAAAAGAAGAAGACCATCAAGATGTTGATGCTGGTGGTAGTCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS TCA 72 bp AGAGGGCAAAGAGGACTACCACCAGCATCAACATCTTaGTGGTCTTCTTCTTTTTGCGCCGCAGGGCAAAGT +
Preference number: 6 (lower is better)
Translates to: RGQRGLPPASTS*WSSSFCAAGQS
Trigger: ACTTTGCCCTGCGGCGCAAAAAGAAGAAGACCATCAAGATGTTGATGCTGGTGGTAGTCCTCTTTGCCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS TCA 72 bp CCAGATGACAGCGATGTAGATGACACCCTTTGTGATTaGGATCCGGGGTTTCAAGGGGTGCATGATGACCAA +
Preference number: 6 (lower is better)
Translates to: PDDSDVDDTLCD*DPGFQGVHDDQ
Trigger: TTGGTCATCATGCACCCCTTGAAACCCCGGATCTCAATCACAAAGGGTGTCATCTACATCGCTGTCATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539203.2
CDS CAA 72 bp ACCACCAGCATCAACATCTTGATGGTCTTCTTCTTTTaGCGCCGCAGGGCAAAGTACTGCTCTGTGGTCACA +
Preference number: 6 (lower is better)
Translates to: TTSINILMVFFF*RRRAKYCSVVT
Trigger: TGTGACCACAGAGCAGTACTTTGCCCTGCGGCGCAAAAAGAAGAAGACCATCAAGATGTTGATGCTGGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS GCA 72 bp ATGGTCTTCTTCTTTTTGCGCCGCAGGGCAAAGTACTaGTCTGTGGTCACATCGCCAATCATATTACACAGC +
Preference number: 6 (lower is better)
Translates to: MVFFFLRRRAKY*SVVTSPIILHS
Trigger: GCTGTGTAATATGATTGGCGATGTGACCACAGAGCAGTACTTTGCCCTGCGGCGCAAAAAGAAGAAGACCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2
CDS CCA 72 bp TCTTCTTTTTGCGCCGCAGGGCAAAGTACTGCTCTGTaGTCACATCGCCAATCATATTACACAGCCACAGTT +
Preference number: 6 (lower is better)
Translates to: SSFCAAGQSTAL*SHRQSYYTATV
Trigger: AACTGTGGCTGTGTAATATGATTGGCGATGTGACCACAGAGCAGTACTTTGCCCTGCGGCGCAAAAAGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243673.7
ENST00000539203.2