RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPR68 (Homo sapiens)

Ensembl gene IDs: ENSG00000119714

Ensembl transcript IDs: ENST00000529102.1, ENST00000529300.1, ENST00000531499.2, ENST00000535815.5, ENST00000650645.1

Found 432 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGGGAACGCAGTTCACTGTCTTCCCCCGACCAGCAGCCCCAGCCTaGCCACATCGCAGCCGCGGCAGAGGACACGGCTTATTCCCACGA +
Preference number: 1 (lower is better)
Translates to: QGTQFTVFPRPAAPA*PHRSRGRGHGLFPR
Trigger: TCGTGGGAATAAGCCGTGTCCTCTGCCGCGGCTGCGATGTGGCCAGGCTGGGGCTGCTGGTCGGGGGAAGACAGTGAACTGCGTTCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR TCA 90 bp GGGAAGAGAACCTCCCCAAGTCATCGGACACCCTCCACAAGGATCTaGGCAGGGGCTGTGCAGTCAAAGCCAAGTGTAGCCCTGGGACCA +
Preference number: 1 (lower is better)
Translates to: GKRTSPSHRTPSTRI*AGAVQSKPSVALGP
Trigger: TGGTCCCAGGGCTACACTTGGCTTTGACTGCACAGCCCCTGCTCAGATCCTTGTGGAGGGTGTCCGATGACTTGGGGAGGTTCTCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR CCA 90 bp GGTGGGCAGGTCTTCTGGAGCAGCAGGCGGCTCTCCCAGTTCTTATaGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCT +
Preference number: 1 (lower is better)
Translates to: GGQVFWSSRRLSQFL*LELGSSSAYNSLNS
Trigger: AGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCATAAGAACTGGGAGAGCCGCCTGCTGCTCCAGAAGACCTGCCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR GCA 90 bp CCTGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTaGCGCCTTCAAACTTGGTCACTTCCTCCTCTAGGAAGGGGAAGA +
Preference number: 1 (lower is better)
Translates to: PGLSCMGSSWLCGHF*RLQTWSLPPLGRGR
Trigger: TCTTCCCCTTCCTAGAGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR CCA 90 bp AGCCCAGTTAGCCTCTTGGTTCTGAAGAACTCGAGTCCCAGGCCATaGAAGGCATCCTTAGTCAGAGCTGGTCCCAGTTCACTGACCAGA +
Preference number: 1 (lower is better)
Translates to: SPVSLLVLKNSSPRP*KASLVRAGPSSLTR
Trigger: TCTGGTCAGTGAACTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGAGTTCTTCAGAACCAAGAGGCTAACTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR CCA 90 bp ATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTTCAAACTTaGTCACTTCCTCCTCTAGGAAGGGGAAGAGAACCTCCCCAAGTC +
Preference number: 1 (lower is better)
Translates to: MGSSWLCGHFCRLQT*SLPPLGRGREPPQV
Trigger: GACTTGGGGAGGTTCTCTTCCCCTTCCTAGAGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGAGCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR CCA 90 bp CCAGTAAAATCCTGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTaGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCCTCCTCTAGG +
Preference number: 1 (lower is better)
Translates to: PVKSWTELHGLFLAV*PFLPPSNLVTSSSR
Trigger: CCTAGAGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGATTTTACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR CCA 90 bp GGAGGCATGAAGGCTTCCACCAATGTCACTGACCCAGTAAAATCCTaGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTG +
Preference number: 1 (lower is better)
Translates to: GGMKASTNVTDPVKS*TELHGLFLAVWPFL
Trigger: CAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGATTTTACTGGGTCAGTGACATTGGTGGAAGCCTTCATGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR TCA 90 bp GGGAAGCCAGTGTTTAAGGTCAACATAGGAGGAAGTGCTGTGGAATaGGGAGGCATGAAGGCTTCCACCAATGTCACTGACCCAGTAAAA +
Preference number: 1 (lower is better)
Translates to: GKPVFKVNIGGSAVE*GGMKASTNVTDPVK
Trigger: TTTTACTGGGTCAGTGACATTGGTGGAAGCCTTCATGCCTCCTCATTCCACAGCACTTCCTCCTATGTTGACCTTAAACACTGGCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR TCA 90 bp TCTTCCCTTCCCACCCTGTTGTGGGCGGGCTGCAGTGCTGATCCCACCGGGACGGAAGGCCCTGGCAGCTaGACGCCCAGCCTCCCACCC +
Preference number: 2 (lower is better)
Translates to: SSLPTLLWAGCSADPTGTEGPGS*TPSLPP
Trigger: GGGTGGGAGGCTGGGCGTTCAGCTGCCAGGGCCTTC...CGTCCCGGTGGGATCAGCACTGCAGCCCGCCCACAACAGGGTGGGAAGGGAAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR CCA 90 bp CACCGGGACGTTTGGACAGGCATTGTCTGTGACAACGGTGGCATTGGAAGGCCCCCAGCAGCCCCAGCCTaGCCACATCGCAGCCGCGGC +
Preference number: 2 (lower is better)
Translates to: HRDVWTGIVCDNGGIGRPPAAPA*PHRSRG
Trigger: GCCGCGGCTGCGATGTGGCCAGGCTGGGGCTGCTGG...GGGCCTTCCAATGCCACCGTTGTCACAGACAATGCCTGTCCAAACGTCCCGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR CCA 90 bp GACGTTTGGACAGGCATTGTCTGTGACAACGGTGGCATTGGAAGGCCCTGGCAGGGCTCAGGCCTCACGTaGAGCCACCCGCGGAGGACC +
Preference number: 2 (lower is better)
Translates to: DVWTGIVCDNGGIGRPWQGSGLT*SHPRRT
Trigger: GGTCCTCCGCGGGTGGCTCCACGTGAGGCCTGAGCC...CTGCCAGGGCCTTCCAATGCCACCGTTGTCACAGACAATGCCTGTCCAAACGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR CCA 90 bp AGCAGGGGCTGTGCAGTCAAAGCCAAGTGTAGCCCTGGGACCACTGTGAGCACCGGTGGGCAGGTCTTCTaGAGCAGCAGGCGGCTCTCC +
Preference number: 2 (lower is better)
Translates to: SRGCAVKAKCSPGTTVSTGGQVF*SSRRLS
Trigger: GGAGAGCCGCCTGCTGCTCCAGAAGACCTGCCCACC...GGTGCTCACAGTGGTCCCAGGGCTACACTTGGCTTTGACTGCACAGCCCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR GCA 90 bp AGCAGGGGCTGTGCAGTCAAAGCCAAGTGTAGCCCTGGGACCACTGTGAGCACCTTACAGGGGCTTCCCTaGCTCCGCAGCGAGGGAAGC +
Preference number: 2 (lower is better)
Translates to: SRGCAVKAKCSPGTTVSTLQGLP*LRSEGS
Trigger: GCTTCCCTCGCTGCGGAGGCAGGGAAGCCCCTGTAA...GGTGCTCACAGTGGTCCCAGGGCTACACTTGGCTTTGACTGCACAGCCCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR CCA 90 bp TGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACCCACCAGCAGCCCCAGCCTaGCCACATCGCAGCCGCGGC +
Preference number: 2 (lower is better)
Translates to: WLELGSSSAYNSLNSPNPPAAPA*PHRSRG
Trigger: GCCGCGGCTGCGATGTGGCCAGGCTGGGGCTGCTGG...TGGGTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR TCA 90 bp TGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACCCAGAAGGCCCTGGCAGCTaGACGCCCAGCCTCCCACCC +
Preference number: 2 (lower is better)
Translates to: WLELGSSSAYNSLNSPNPEGPGS*TPSLPP
Trigger: GGGTGGGAGGCTGGGCGTTCAGCTGCCAGGGCCTTC...TGGGTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR GCA 90 bp TCCTGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTCTGTTGTGGGCGGGCTaGAGTGCTGATCCCACCGGG +
Preference number: 2 (lower is better)
Translates to: SWTELHGLFLAVWPFLPPLLWAG*SADPTG
Trigger: CCCGGTGGGATCAGCACTGCAGCCCGCCCACAACAG...AGGCGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR CCA 90 bp AAATCCTGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGGGCTCAGGCCTCACGTaGAGCCACCCGCGGAGGACC +
Preference number: 2 (lower is better)
Translates to: KSWTELHGLFLAVWPFLPGSGLT*SHPRRT
Trigger: GGTCCTCCGCGGGTGGCTCCACGTGAGGCCTGAGCC...CGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR CCA 90 bp GAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGTTCGGTGGGCAGGTCTTCTaGAGCAGCAGGCGGCTCTCC +
Preference number: 2 (lower is better)
Translates to: ELESQAMEGILSQSWSQFGGQVF*SSRRLS
Trigger: GGAGAGCCGCCTGCTGCTCCAGAAGACCTGCCCACC...GAACTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGAGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR TCA 90 bp CTGTGTGGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCCTCCTCTAGGAAGGGCCCTGGGACCACTGTaGGCACCCTTCCCTGGGGCA +
Preference number: 2 (lower is better)
Translates to: LCGHFCRLQTWSLPPLGRALGPL*APFPGA
Trigger: TGCCCCAGGGAAGGGTGCTCACAGTGGTCCCAGGGC...CCTTCCTAGAGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR CCA 90 bp TCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCCTCCTGGCTCAGGCCTCACGTaGAGCCACCCGCGGAGGACC +
Preference number: 2 (lower is better)
Translates to: SSWLCGHFCRLQTWSLPPGSGLT*SHPRRT
Trigger: GGTCCTCCGCGGGTGGCTCCACGTGAGGCCTGAGCC...AGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR TCA 90 bp TCCTGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTCCCTCCACAAGGATCTaGGCAGGGGCTGTGCAGTCA +
Preference number: 2 (lower is better)
Translates to: SWTELHGLFLAVWPFLPPPSTRI*AGAVQS
Trigger: TGACTGCACAGCCCCTGCTCAGATCCTTGTGGAGGG...AGGCGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR GCA 90 bp GGGGTTCTGCCTGGGCCTCCCTTTGGTAGATTCCAGAAATGTTTGCTGATGCCATTACAGGGGCTTCCCTaGCTCCGCAGCGAGGGAAGC +
Preference number: 2 (lower is better)
Translates to: GVLPGPPFGRFQKCLLMPLQGLP*LRSEGS
Trigger: GCTTCCCTCGCTGCGGAGGCAGGGAAGCCCCTGTAA...TGGCATCAGCAAACATTTCTGGAATCTACCAAAGGGAGGCCCAGGCAGAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR CCA 90 bp TGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACCCAGGCATTGGAAGGCCCTaGCAGCTGAACGCCCAGCCT +
Preference number: 2 (lower is better)
Translates to: WLELGSSSAYNSLNSPNPGIGRP*QLNAQP
Trigger: AGGCTGGGCGTTCAGCTGCCAGGGCCTTCCAATGCC...TGGGTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR GCA 90 bp TCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCCTCCTTTACAGGGGCTTCCCTaGCTCCGCAGCGAGGGAAGC +
Preference number: 2 (lower is better)
Translates to: SSWLCGHFCRLQTWSLPPLQGLP*LRSEGS
Trigger: GCTTCCCTCGCTGCGGAGGCAGGGAAGCCCCTGTAA...AGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR GCA 90 bp TTATGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACCTGTTGTGGGCGGGCTaGAGTGCTGATCCCACCGGG +
Preference number: 2 (lower is better)
Translates to: LWLELGSSSAYNSLNSPNLLWAG*SADPTG
Trigger: CCCGGTGGGATCAGCACTGCAGCCCGCCCACAACAG...GTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR CCA 90 bp CTGTGTGGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCCTCCTCTAGGAAGGCTTCCCACCCTGTTGTaGGCGGGCTGCAGTGCTGAT +
Preference number: 2 (lower is better)
Translates to: LCGHFCRLQTWSLPPLGRLPTLL*AGCSAD
Trigger: ATCAGCACTGCAGCCCGCCCACAACAGGGTGGGAAG...CCTTCCTAGAGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR TCA 90 bp AGGGGAAGAGAACCTCCCCAAGTCATCGGACACCCTCCACAAGGATCTGAGCAGGACAGGCATTGTCTGTaGCAACGGTGGCATTGGAAG +
Preference number: 2 (lower is better)
Translates to: RGREPPQVIGHPPQGSEQDRHCL*QRWHWK
Trigger: CTTCCAATGCCACCGTTGTCACAGACAATGCCTGTC...CTGCTCAGATCCTTGTGGAGGGTGTCCGATGACTTGGGGAGGTTCTCTTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR GCA 90 bp GACGTTTGGACAGGCATTGTCTGTGACAACGGTGGCATTGGAAGGCCCTGGCAGTCCTCACACTCCCCATaGACAAACTCTGCAGGAAGC +
Preference number: 2 (lower is better)
Translates to: DVWTGIVCDNGGIGRPWQSSHSP*TNSAGS
Trigger: GCTTCCTGCAGAGTTTGTGCATGGGGAGTGTGAGGA...CTGCCAGGGCCTTCCAATGCCACCGTTGTCACAGACAATGCCTGTCCAAACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR CCA 90 bp TGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTTCATCCCACCGGGACGTTTaGACAGGCATTGTCTGTGAC +
Preference number: 2 (lower is better)
Translates to: WTELHGLFLAVWPFLPPSSHRDV*TGIVCD
Trigger: GTCACAGACAATGCCTGTCCAAACGTCCCGGTGGGA...TGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR CAA 90 bp CATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTTCAAACTaGGTCACTTCCTCCTCTAGGAAGGGGAAGAGAACCTCCCCAAGT +
Preference number: 2 (lower is better)
Translates to: HGLFLAVWPFLPPSN*VTSSSRKGKRTSPS
Trigger: ACTTGGGGAGGTTCTCTTCCCCTTCCTAGAGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR TCA 90 bp AGGGGAAGAGAACCTCCCCAAGTCATCGGACACCCTCCACAAGGATCTGAGCAGACTGACCAGAAGGTCTaGAGGGCTAGCATTTCTGTG +
Preference number: 2 (lower is better)
Translates to: RGREPPQVIGHPPQGSEQTDQKV*RASISV
Trigger: CACAGAAATGCTAGCCCTTCAGACCTTCTGGTCAGT...CTGCTCAGATCCTTGTGGAGGGTGTCCGATGACTTGGGGAGGTTCTCTTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR CCA 90 bp GGGGTTCTGCCTGGGCCTCCCTTTGGTAGATTCCAGAAATGTTTGCTGATGCCATCCCACCGGGACGTTTaGACAGGCATTGTCTGTGAC +
Preference number: 2 (lower is better)
Translates to: GVLPGPPFGRFQKCLLMPSHRDV*TGIVCD
Trigger: GTCACAGACAATGCCTGTCCAAACGTCCCGGTGGGA...TGGCATCAGCAAACATTTCTGGAATCTACCAAAGGGAGGCCCAGGCAGAACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR CCA 90 bp TTATGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACCTTCCCACCCTGTTGTaGGCGGGCTGCAGTGCTGAT +
Preference number: 2 (lower is better)
Translates to: LWLELGSSSAYNSLNSPNLPTLL*AGCSAD
Trigger: ATCAGCACTGCAGCCCGCCCACAACAGGGTGGGAAG...GTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR CCA 90 bp CTGTGTGGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCCTCCTCTAGGAAGGTCTGCTTCTAGCCCCTaGTCCCTTCTTGGAGGAAGC +
Preference number: 2 (lower is better)
Translates to: LCGHFCRLQTWSLPPLGRSASSP*SLLGGS
Trigger: GCTTCCTCCAAGAAGGGACCAGGGGCTAGAAGCAGA...CCTTCCTAGAGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR TCA 90 bp AAATCCTGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGTTAGCCTCTTGGTTCTaGAGAACTCGAGTCCCAGGC +
Preference number: 2 (lower is better)
Translates to: KSWTELHGLFLAVWPFLPLASWF*RTRVPG
Trigger: GCCTGGGACTCGAGTTCTTCAGAACCAAGAGGCTAA...CGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR CCA 90 bp GTTAGCCTCTTGGTTCTGAAGAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGGGCTAGCATTTCTGTaGAGGTGGGCAGGTCTTCTG +
Preference number: 2 (lower is better)
Translates to: VSLLVLKNSSPRPWKASLGLAFL*RWAGLL
Trigger: CAGAAGACCTGCCCACCTCCACAGAAATGCTAGCCC...TAAGGATGCCTTCCATGGCCTGGGACTCGAGTTCTTCAGAACCAAGAGGCTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR CCA 90 bp CTGTGTGGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCCTCCTCTAGGAAGGTCGAGTCCCAGGCCATaGAAGGCATCCTTAGTCAGA +
Preference number: 2 (lower is better)
Translates to: LCGHFCRLQTWSLPPLGRSSPRP*KASLVR
Trigger: TCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGA...CCTTCCTAGAGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR CAA 90 bp GTCACTGACCCAGTAAAATCCTGGACTGAGTTGCATGGGCTCTTCTaGGCTGTGTGGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCC +
Preference number: 2 (lower is better)
Translates to: VTDPVKSWTELHGLF*AVWPFLPPSNLVTS
Trigger: GGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGATTTTACTGGGTCAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR CAA 90 bp AAGGCTTCCACCAATGTCACTGACCCAGTAAAATCCTGGACTGAGTaGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTTCA +
Preference number: 2 (lower is better)
Translates to: KASTNVTDPVKSWTE*HGLFLAVWPFLPPS
Trigger: TGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGATTTTACTGGGTCAGTGACATTGGTGGAAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR TCA 90 bp GGGGTTCTGCCTGGGCCTCCCTTTGGTAGATTCCAGAAATGTTTGCTGATGCCAACTGACCAGAAGGTCTaGAGGGCTAGCATTTCTGTG +
Preference number: 2 (lower is better)
Translates to: GVLPGPPFGRFQKCLLMPTDQKV*RASISV
Trigger: CACAGAAATGCTAGCCCTTCAGACCTTCTGGTCAGT...TGGCATCAGCAAACATTTCTGGAATCTACCAAAGGGAGGCCCAGGCAGAACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR TCA 90 bp AAATCCTGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGACTGACCAGAAGGTCTaGAGGGCTAGCATTTCTGTG +
Preference number: 2 (lower is better)
Translates to: KSWTELHGLFLAVWPFLPTDQKV*RASISV
Trigger: CACAGAAATGCTAGCCCTTCAGACCTTCTGGTCAGT...CGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR CCA 90 bp AAATCCTGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGATCCTTAGTCAGAGCTaGTCCCAGTTCACTGACCAG +
Preference number: 2 (lower is better)
Translates to: KSWTELHGLFLAVWPFLPILSQS*SQFTDQ
Trigger: CTGGTCAGTGAACTGGGACCAGCTCTGACTAAGGAT...CGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR TCA 90 bp GTTACTTTGCTTTATTTGCAGACTGAAGTGGGCTACATAAATCCATTACAGAGTGGCGGGCTGCAGTGCTaGTCCCACCGGGACGTTTGG +
Preference number: 2 (lower is better)
Translates to: VTLLYLQTEVGYINPLQSGGLQC*SHRDVW
Trigger: CCAAACGTCCCGGTGGGATCAGCACTGCAGCCCGCC...ACTCTGTAATGGATTTATGTAGCCCACTTCAGTCTGCAAATAAAGCAAAGTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR GCA 90 bp AAAATACAACTCTTGACAGTAAATGAGACTGCCCTCAGCTCATCCCAGTCTGTATCCTCACACTCCCCATaGACAAACTCTGCAGGAAGC +
Preference number: 2 (lower is better)
Translates to: KIQLLTVNETALSSSQSVSSHSP*TNSAGS
Trigger: GCTTCCTGCAGAGTTTGTGCATGGGGAGTGTGAGGA...TACAGACTGGGATGAGCTGAGGGCAGTCTCATTTACTGTCAAGAGTTGTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR GCA 90 bp AAAATACAACTCTTGACAGTAAATGAGACTGCCCTCAGCTCATCCCAGTCTGTACTGTGTGGCCATTTCTaGCGCCTTCAAACTTGGTCA +
Preference number: 2 (lower is better)
Translates to: KIQLLTVNETALSSSQSVLCGHF*RLQTWS
Trigger: TGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAG...TACAGACTGGGATGAGCTGAGGGCAGTCTCATTTACTGTCAAGAGTTGTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR TCA 90 bp GTTACTTTGCTTTATTTGCAGACTGAAGTGGGCTACATAAATCCATTACAGAGTGACAGGCATTGTCTGTaGCAACGGTGGCATTGGAAG +
Preference number: 2 (lower is better)
Translates to: VTLLYLQTEVGYINPLQSDRHCL*QRWHWK
Trigger: CTTCCAATGCCACCGTTGTCACAGACAATGCCTGTC...ACTCTGTAATGGATTTATGTAGCCCACTTCAGTCTGCAAATAAAGCAAAGTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR CCA 90 bp GTTACTTTGCTTTATTTGCAGACTGAAGTGGGCTACATAAATCCATTACAGAGTTCGAGTCCCAGGCCATaGAAGGCATCCTTAGTCAGA +
Preference number: 2 (lower is better)
Translates to: VTLLYLQTEVGYINPLQSSSPRP*KASLVR
Trigger: TCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGA...ACTCTGTAATGGATTTATGTAGCCCACTTCAGTCTGCAAATAAAGCAAAGTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR GCA 90 bp GTTACTTTGCTTTATTTGCAGACTGAAGTGGGCTACATAAATCCATTACAGAGTCTGTGTGGCCATTTCTaGCGCCTTCAAACTTGGTCA +
Preference number: 2 (lower is better)
Translates to: VTLLYLQTEVGYINPLQSLCGHF*RLQTWS
Trigger: TGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAG...ACTCTGTAATGGATTTATGTAGCCCACTTCAGTCTGCAAATAAAGCAAAGTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR CCA 90 bp GTTACTTTGCTTTATTTGCAGACTGAAGTGGGCTACATAAATCCATTACAGAGTGACCCAGTAAAATCCTaGACTGAGTTGCATGGGCTC +
Preference number: 2 (lower is better)
Translates to: VTLLYLQTEVGYINPLQSDPVKS*TELHGL
Trigger: GAGCCCATGCAACTCAGTCCAGGATTTTACTGGGTC...ACTCTGTAATGGATTTATGTAGCCCACTTCAGTCTGCAAATAAAGCAAAGTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR GCA 72 bp AGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTaGCTCCGCAGCGAGGGAAGCAGGAGGCGGCAGGCC +
Preference number: 3 (lower is better)
Translates to: SESRLPELQGLP*LRSEGSRRRQA
Trigger: GGCCTGCCGCCTCCTGCTTCCCTCGCTGCGGAGGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR CCA 72 bp CAGTTCACTGTCTTCCCCCGACCAGCAGCCCCAGCCTaGCCACATCGCAGCCGCGGCAGAGGACACGGCTTA +
Preference number: 3 (lower is better)
Translates to: QFTVFPRPAAPA*PHRSRGRGHGL
Trigger: TAAGCCGTGTCCTCTGCCGCGGCTGCGATGTGGCCAGGCTGGGGCTGCTGGTCGGGGGAAGACAGTGAACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR CCA 72 bp GGCATTGTCTGTGACAACGGTGGCATTGGAAGGCCCTaGCAGCTGAACGCCCAGCCTCCCACCCTCCATGTC +
Preference number: 3 (lower is better)
Translates to: GIVCDNGGIGRP*QLNAQPPTLHV
Trigger: GACATGGAGGGTGGGAGGCTGGGCGTTCAGCTGCCAGGGCCTTCCAATGCCACCGTTGTCACAGACAATGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR CCA 72 bp CTTCCCTGGGGCACCTCCAGCCTGGGCTGTTGCCTCTaGGCATCCCCGATGAAAGGGCTAAGAGACACAGCA +
Preference number: 3 (lower is better)
Translates to: LPWGTSSLGCCL*ASPMKGLRDTA
Trigger: TGCTGTGTCTCTTAGCCCTTTCATCGGGGATGCCCAGAGGCAACAGCCCAGGCTGGAGGTGCCCCAGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR TCA 72 bp TTCCCTTCCCACCCTGTTGTGGGCGGGCTGCAGTGCTaGTCCCACCGGGACGTTTGGACAGGCATTGTCTGT +
Preference number: 3 (lower is better)
Translates to: FPSHPVVGGLQC*SHRDVWTGIVC
Trigger: ACAGACAATGCCTGTCCAAACGTCCCGGTGGGATCAGCACTGCAGCCCGCCCACAACAGGGTGGGAAGGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR CAA 90 bp AGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGTTCACTGACCAGAAGGTCCCTTCCCACCCTGTaGTGGGCGGGCTGCAGTGCT +
Preference number: 3 (lower is better)
Translates to: RPWKASLVRAGPSSLTRRSLPTL*WAGCSA
Trigger: AGCACTGCAGCCCGCCCACAACAGGGTGGGAAGGGA...CCTTCTGGTCAGTGAACTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR CAA 90 bp TTATGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACTCCCTTCCCACCCTGTaGTGGGCGGGCTGCAGTGCT +
Preference number: 3 (lower is better)
Translates to: LWLELGSSSAYNSLNSPNSLPTL*WAGCSA
Trigger: AGCACTGCAGCCCGCCCACAACAGGGTGGGAAGGGA...GTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR CCA 72 bp GTCTTCTGGAGCAGCAGGCGGCTCTCCCAGTTCTTATaGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCC +
Preference number: 3 (lower is better)
Translates to: VFWSSRRLSQFL*LELGSSSAYNS
Trigger: GGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCATAAGAACTGGGAGAGCCGCCTGCTGCTCCAGAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR CAA 90 bp GAAGAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGACGTTTGGACAGGCATaGTCTGTGACAACGGTGGCA +
Preference number: 3 (lower is better)
Translates to: EELESQAMEGILSQSWSQTFGQA*SVTTVA
Trigger: TGCCACCGTTGTCACAGACAATGCCTGTCCAAACGT...CTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGAGTTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR TCA 72 bp CCCTTCTTGGAGGAAGCCCAGTTAGCCTCTTGGTTCTaGAGAACTCGAGTCCCAGGCCATGGAAGGCATCCT +
Preference number: 3 (lower is better)
Translates to: PFLEEAQLASWF*RTRVPGHGRHP
Trigger: AGGATGCCTTCCATGGCCTGGGACTCGAGTTCTTCAGAACCAAGAGGCTAACTGGGCTTCCTCCAAGAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR CAA 90 bp TCCTGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTAGCCCAGTTAGCCTCTaGGTTCTGAAGAACTCGAGT +
Preference number: 3 (lower is better)
Translates to: SWTELHGLFLAVWPFLPPSPVSL*VLKNSS
Trigger: ACTCGAGTTCTTCAGAACCAAGAGGCTAACTGGGCT...AGGCGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR CCA 72 bp AGCCTCTTGGTTCTGAAGAACTCGAGTCCCAGGCCATaGAAGGCATCCTTAGTCAGAGCTGGTCCCAGTTCA +
Preference number: 3 (lower is better)
Translates to: SLLVLKNSSPRP*KASLVRAGPSS
Trigger: TGAACTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGAGTTCTTCAGAACCAAGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR CCA 72 bp TCCTGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTaGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCC +
Preference number: 3 (lower is better)
Translates to: SWTELHGLFLAV*PFLPPSNLVTS
Trigger: GGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR GCA 72 bp AGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTaGCGCCTTCAAACTTGGTCACTTCCTCCTCTAGGA +
Preference number: 3 (lower is better)
Translates to: SCMGSSWLCGHF*RLQTWSLPPLG
Trigger: TCCTAGAGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR CAA 90 bp AAAATACAACTCTTGACAGTAAATGAGACTGCCCTCAGCTCATCCCAGTCTGTATCCCTTCCCACCCTGTaGTGGGCGGGCTGCAGTGCT +
Preference number: 3 (lower is better)
Translates to: KIQLLTVNETALSSSQSVSLPTL*WAGCSA
Trigger: AGCACTGCAGCCCGCCCACAACAGGGTGGGAAGGGA...TACAGACTGGGATGAGCTGAGGGCAGTCTCATTTACTGTCAAGAGTTGTATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR CAA 90 bp TTATGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACACGTTTGGACAGGCATaGTCTGTGACAACGGTGGCA +
Preference number: 3 (lower is better)
Translates to: LWLELGSSSAYNSLNSPNTFGQA*SVTTVA
Trigger: TGCCACCGTTGTCACAGACAATGCCTGTCCAAACGT...GTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR-3UTR CAA 90 bp AAAATACAACTCTTGACAGTAAATGAGACTGCCCTCAGCTCATCCCAGTCTGTACTGCCGCCTTCAAACTaGGTCACTTCCTCCTCTAGG +
Preference number: 3 (lower is better)
Translates to: KIQLLTVNETALSSSQSVLPPSN*VTSSSR
Trigger: CCTAGAGGAGGAAGTGACCAAGTTTGAAGGCGGCAG...TACAGACTGGGATGAGCTGAGGGCAGTCTCATTTACTGTCAAGAGTTGTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp CACGAGCCAACCGGGGCTTATTCCCACCCTCGGCGGTCCCAGCGGGCTCAGCAAGGCTCAGGCCTCACGTaGAGCCACCCGCGGAGGACC +
Preference number: 4 (lower is better)
Translates to: HEPTGAYSHPRRSQRAQQGSGLT*SHPRRT
Trigger: GGTCCTCCGCGGGTGGCTCCACGTGAGGCCTGAGCC...TTGCTGAGCCCGCTGGGACCGCCGAGGGTGGGAATAAGCCCCGGTTGGCTCGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp CAGCGGGCTCAGCAAGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTGCCCCAGCAGCCCCAGCCTaGCCACATCGCAGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: QRAQQARAGFRSYRGFPAPAAPA*PHRSRG
Trigger: GCCGCGGCTGCGATGTGGCCAGGCTGGGGCTGCTGG...GGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCTTGCTGAGCCCGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TTCCGGAGTTACAGGGGCTTCCCTGCCTCCGCAGCGAGGGAAGCAGGAGGCGGCGGGCATCGCTGGTGGTaGGCAAGACCCTGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: FRSYRGFPASAAREAGGGGHRWW*ARPCAA
Trigger: CGCCGCGCAGGGTCTTGCCCACCACCAGCGATGCCC...GCCGCCTCCTGCTTCCCTCGCTGCGGAGGCAGGGAAGCCCCTGTAACTCCGGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531499.2
CDS-3UTR TCA 90 bp CACGAGCCAACCGGGGCTTATTCCCACCCTCGGCGGTCCCAGCGGGCTCAGCAAGCCCTGGGACCACTGTaGGCACCCTTCCCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: HEPTGAYSHPRRSQRAQQALGPL*APFPGA
Trigger: TGCCCCAGGGAAGGGTGCTCACAGTGGTCCCAGGGC...TTGCTGAGCCCGCTGGGACCGCCGAGGGTGGGAATAAGCCCCGGTTGGCTCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp CAGCGGGCTCAGCAAGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTGCCTGCGGCTCTTCTGGGTaGCGTGGCTCCGGCGCACGG +
Preference number: 4 (lower is better)
Translates to: QRAQQARAGFRSYRGFPACGSSG*RGSGAR
Trigger: CCGTGCGCCGGAGCCACGGCACCCAGAAGAGCCGCA...GGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCTTGCTGAGCCCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp TCTTCCCTTCCCACCCTGTTGTGGGCGGGCTGCAGTGCTGATCCCACCGGGACGCAGGCTAGGCCAACCTaGCCGTGGGGAACCCGCCCG +
Preference number: 4 (lower is better)
Translates to: SSLPTLLWAGCSADPTGTQARPT*PWGTRP
Trigger: CGGGCGGGTTCCCCACGGGCAGGTTGGCCTAGCCTG...CGTCCCGGTGGGATCAGCACTGCAGCCCGCCCACAACAGGGTGGGAAGGGAAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TTCCGGAGTTACAGGGGCTTCCCTGCCTCCGCAGCGAGGGAAGCAGGAGGCGGCTCCTTGCGGCTCTTCTaGGTGCCGTGGCTCCGGCGC +
Preference number: 4 (lower is better)
Translates to: FRSYRGFPASAAREAGGGSLRLF*VPWLRR
Trigger: GCGCCGGAGCCACGGCACCCAGAAGAGCCGCAAGGA...GCCGCCTCCTGCTTCCCTCGCTGCGGAGGCAGGGAAGCCCCTGTAACTCCGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TCTTCCCTTCCCACCCTGTTGTGGGCGGGCTGCAGTGCTGATCCCACCGGGACGAGGCCAACCTGCCCGTaGGGAACCCGCCCGACCCTG +
Preference number: 4 (lower is better)
Translates to: SSLPTLLWAGCSADPTGTRPTCP*GTRPTL
Trigger: CAGGGTCGGGCGGGTTCCCCACGGGCAGGTTGGCCT...CGTCCCGGTGGGATCAGCACTGCAGCCCGCCCACAACAGGGTGGGAAGGGAAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GGGCTCAGCAAGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTGCCTCCGAGGCCAACCTGCCCGTaGGGAACCCGCCCGACCCTG +
Preference number: 4 (lower is better)
Translates to: GLSKREQASGVTGASLPPRPTCP*GTRPTL
Trigger: CAGGGTCGGGCGGGTTCCCCACGGGCAGGTTGGCCT...CGGAGGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCTTGCTGAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp CAGCGGGCTCAGCAAGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTGCCGGGCACACGCAGCCCTaGGTGAGGGTCCATGCCCTG +
Preference number: 4 (lower is better)
Translates to: QRAQQARAGFRSYRGFPAGHTQP*VRVHAL
Trigger: CAGGGCATGGACCCTCACTCAGGGCTGCGTGTGCCC...GGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCTTGCTGAGCCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531499.2
CDS-3UTR CCA 90 bp CAGCGGGCTCAGCAAGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTGCCTCCTTGCGGCTCTTCTaGGTGCCGTGGCTCCGGCGC +
Preference number: 4 (lower is better)
Translates to: QRAQQARAGFRSYRGFPASLRLF*VPWLRR
Trigger: GCGCCGGAGCCACGGCACCCAGAAGAGCCGCAAGGA...GGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCTTGCTGAGCCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp CAGCGGGCTCAGCAAGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTGCCTCGGGCTCCTCACCCTaGGCCCCGCTTTTCCCGGAG +
Preference number: 4 (lower is better)
Translates to: QRAQQARAGFRSYRGFPASGSSP*APLFPE
Trigger: CTCCGGGAAAAGCGGGGCCCAGGGTGAGGAGCCCGA...GGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCTTGCTGAGCCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TCTTCCCTTCCCACCCTGTTGTGGGCGGGCTGCAGTGCTGATCCCACCGGGACGGCTGGGCATCGCTGGTaGTGGGCAAGACCCTGCGCG +
Preference number: 4 (lower is better)
Translates to: SSLPTLLWAGCSADPTGTAGHRW*WARPCA
Trigger: CGCGCAGGGTCTTGCCCACCACCAGCGATGCCCAGC...CGTCCCGGTGGGATCAGCACTGCAGCCCGCCCACAACAGGGTGGGAAGGGAAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531499.2
CDS-3UTR TCA 90 bp CGCAGCCGCGGCAGAGGACACGGCTTATTCCCACGAGCCAACCGGGGCTTATTCGGCGGGCTGCAGTGCTaGTCCCACCGGGACGTTTGG +
Preference number: 4 (lower is better)
Translates to: RSRGRGHGLFPRANRGLFGGLQC*SHRDVW
Trigger: CCAAACGTCCCGGTGGGATCAGCACTGCAGCCCGCC...GAATAAGCCCCGGTTGGCTCGTGGGAATAAGCCGTGTCCTCTGCCGCGGCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp CGCAGCCGCGGCAGAGGACACGGCTTATTCCCACGAGCCAACCGGGGCTTATTCGCACGGCGCGCAGGATaGCCTGGTAGGACGCCAGCA +
Preference number: 4 (lower is better)
Translates to: RSRGRGHGLFPRANRGLFARRAG*PGRTPA
Trigger: TGCTGGCGTCCTACCAGGGCATCCTGCGCGCCGTGC...GAATAAGCCCCGGTTGGCTCGTGGGAATAAGCCGTGTCCTCTGCCGCGGCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp CAGCGGGCTCAGCAAGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTGCCCTGTTGTGGGCGGGCTaGAGTGCTGATCCCACCGGG +
Preference number: 4 (lower is better)
Translates to: QRAQQARAGFRSYRGFPALLWAG*SADPTG
Trigger: CCCGGTGGGATCAGCACTGCAGCCCGCCCACAACAG...GGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCTTGCTGAGCCCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp CACATCGCAGCCGCGGCAGAGGACACGGCTTATTCCCACGAGCCAACCGGGGCTCTGTTGTGGGCGGGCTaGAGTGCTGATCCCACCGGG +
Preference number: 4 (lower is better)
Translates to: HIAAAAEDTAYSHEPTGALLWAG*SADPTG
Trigger: CCCGGTGGGATCAGCACTGCAGCCCGCCCACAACAG...AGCCCCGGTTGGCTCGTGGGAATAAGCCGTGTCCTCTGCCGCGGCTGCGATGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp CACGAGCCAACCGGGGCTTATTCCCACCCTCGGCGGTCCCAGCGGGCTCAGCAAAGAGGGACAGGCAGTTaGCCGGGAAGCCCACCACCA +
Preference number: 4 (lower is better)
Translates to: HEPTGAYSHPRRSQRAQQRGTGS*PGSPPP
Trigger: TGGTGGTGGGCTTCCCGGCCAACTGCCTGTCCCTCT...TTGCTGAGCCCGCTGGGACCGCCGAGGGTGGGAATAAGCCCCGGTTGGCTCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp AGCAGGGGCTGTGCAGTCAAAGCCAAGTGTAGCCCTGGGACCACTGTGAGCACCCTCTTCTGGGTGCCGTaGCTCCGGCGCACGGCGCGC +
Preference number: 4 (lower is better)
Translates to: SRGCAVKAKCSPGTTVSTLFWVP*LRRTAR
Trigger: GCGCGCCGTGCGCCGGAGCCACGGCACCCAGAAGAG...GGTGCTCACAGTGGTCCCAGGGCTACACTTGGCTTTGACTGCACAGCCCCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GGGCTCAGCAAGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTGCCTCCGTGGCGAAGTCGCAGCTaGCCTCCCAGACGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: GLSKREQASGVTGASLPPWRSRS*PPRRCA
Trigger: TGCGCAGCGTCTGGGAGGCCAGCTGCGACTTCGCCA...CGGAGGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCTTGCTGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp CACGAGCCAACCGGGGCTTATTCCCACCCTCGGCGGTCCCAGCGGGCTCAGCAAGGCGAGTTAGGGGTCTaGAAGGCCGGGTGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: HEPTGAYSHPRRSQRAQQGELGV*KAGWSL
Trigger: CAAGCTCCACCCGGCCTTCCAGACCCCTAACTCGCC...TTGCTGAGCCCGCTGGGACCGCCGAGGGTGGGAATAAGCCCCGGTTGGCTCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp GGGCTCAGCAAGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTGCCTCCGCAGGACAGGTCGCCGTaGGACCAGTTGTCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GLSKREQASGVTGASLPPQDRSP*DQLSCC
Trigger: GCAGCACGACAACTGGTCTCACGGCGACCTGTCCTG...CGGAGGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCTTGCTGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp GGGCTCAGCAAGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTGCCTCCGGGTGGGTGGTCTCGCTaGCGAAGCAGTAGAGCACGG +
Preference number: 4 (lower is better)
Translates to: GLSKREQASGVTGASLPPGGWSR*RSSRAR
Trigger: CCGTGCTCTACTGCTTCGTCAGCGAGACCACCCACC...CGGAGGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCTTGCTGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp GGGCTCAGCAAGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTGCCTCCGTGGCCTCCCAGACGCTaGGCACCAGCAGCAACACGT +
Preference number: 4 (lower is better)
Translates to: GLSKREQASGVTGASLPPWPPRR*APAATR
Trigger: ACGTGTTGCTGCTGGTGCGCAGCGTCTGGGAGGCCA...CGGAGGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCTTGCTGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp GGGCTCAGCAAGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTGCCTCCGTTACAGGGGCTTCCCTaGCTCCGCAGCGAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: GLSKREQASGVTGASLPPLQGLP*LRSEGS
Trigger: GCTTCCCTCGCTGCGGAGGCAGGGAAGCCCCTGTAA...CGGAGGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCTTGCTGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp CACGAGCCAACCGGGGCTTATTCCCACCCTCGGCGGTCCCAGCGGGCTCAGCAACTTCGGGTCCCTTCCTaGGAACGCAGGGCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: HEPTGAYSHPRRSQRAQQLRVPS*ERRAKL
Trigger: CAACTTGGCCCTGCGTTCCCAGGAAGGGACCCGAAG...TTGCTGAGCCCGCTGGGACCGCCGAGGGTGGGAATAAGCCCCGGTTGGCTCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531499.2
CDS-3UTR CCA 90 bp CGCAGCCGCGGCAGAGGACACGGCTTATTCCCACGAGCCAACCGGGGCTTATTCCATGGGCTCAGGGACTaGGCCTGTCTCTCCACCGCC +
Preference number: 4 (lower is better)
Translates to: RSRGRGHGLFPRANRGLFHGLRD*ACLSTA
Trigger: GGCGGTGGAGAGACAGGCCCAGTCCCTGAGCCCATG...GAATAAGCCCCGGTTGGCTCGTGGGAATAAGCCGTGTCCTCTGCCGCGGCTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GGGCTCAGCAAGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTGCCTCCGAGGGTCCGGAACTGGTaGAAGCGGAAGGGATGGGCC +
Preference number: 4 (lower is better)
Translates to: GLSKREQASGVTGASLPPRVRNW*KRKGWA
Trigger: GGCCCATCCCTTCCGCTTCCACCAGTTCCGGACCCT...CGGAGGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCTTGCTGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp CACCGGGACGTTTGGACAGGCATTGTCTGTGACAACGGTGGCATTGGAAGGCCCCTCTTCTGGGTGCCGTaGCTCCGGCGCACGGCGCGC +
Preference number: 4 (lower is better)
Translates to: HRDVWTGIVCDNGGIGRPLFWVP*LRRTAR
Trigger: GCGCGCCGTGCGCCGGAGCCACGGCACCCAGAAGAG...GGGCCTTCCAATGCCACCGTTGTCACAGACAATGCCTGTCCAAACGTCCCGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp CAGCGGGCTCAGCAAGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTGCCGAACCCGCCCGACCCTaGCGAGTTAGGGGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: QRAQQARAGFRSYRGFPAEPARP*RVRGLE
Trigger: TTCCAGACCCCTAACTCGCCAGGGTCGGGCGGGTTC...GGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCTTGCTGAGCCCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp CAGCGGGCTCAGCAAGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTGCCGGCATTGGAAGGCCCTaGCAGCTGAACGCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: QRAQQARAGFRSYRGFPAGIGRP*QLNAQP
Trigger: AGGCTGGGCGTTCAGCTGCCAGGGCCTTCCAATGCC...GGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCTTGCTGAGCCCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TTCCGGAGTTACAGGGGCTTCCCTGCCTCCGCAGCGAGGGAAGCAGGAGGCGGCCTGGGCTGTTGCCTCTaGGCATCCCCGATGAAAGGG +
Preference number: 4 (lower is better)
Translates to: FRSYRGFPASAAREAGGGLGCCL*ASPMKG
Trigger: CCCTTTCATCGGGGATGCCCAGAGGCAACAGCCCAG...GCCGCCTCCTGCTTCCCTCGCTGCGGAGGCAGGGAAGCCCCTGTAACTCCGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp CACATCGCAGCCGCGGCAGAGGACACGGCTTATTCCCACGAGCCAACCGGGGCTCCCCATCTTTGGGCCTaGAGGGGCCACACTCCTCAT +
Preference number: 4 (lower is better)
Translates to: HIAAAAEDTAYSHEPTGAPHLWA*RGHTPH
Trigger: ATGAGGAGTGTGGCCCCTTCAGGCCCAAAGATGGGG...AGCCCCGGTTGGCTCGTGGGAATAAGCCGTGTCCTCTGCCGCGGCTGCGATGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp CAGCGGGCTCAGCAAGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTGCCGCTCGTTCCGGGCCTTaGTCTGCAGGTAGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: QRAQQARAGFRSYRGFPAARSGP*SAGSRS
Trigger: ACTTCGGCTACCTGCAGATCAAGGCCCGGAACGAGC...GGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCTTGCTGAGCCCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp CAGCGGGCTCAGCAAGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTGCCGGAAGCGGTAGTAGTTaGTGGCGCGCTGCCATGCCT +
Preference number: 4 (lower is better)
Translates to: QRAQQARAGFRSYRGFPAGSGSS*WRAAMP
Trigger: AGGCATGGCAGCGCGCCATCAACTACTACCGCTTCC...GGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCTTGCTGAGCCCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp CACCGGGACGTTTGGACAGGCATTGTCTGTGACAACGGTGGCATTGGAAGGCCCTGCGGCTCTTCTGGGTaGCGTGGCTCCGGCGCACGG +
Preference number: 4 (lower is better)
Translates to: HRDVWTGIVCDNGGIGRPCGSSG*RGSGAR
Trigger: CCGTGCGCCGGAGCCACGGCACCCAGAAGAGCCGCA...GGGCCTTCCAATGCCACCGTTGTCACAGACAATGCCTGTCCAAACGTCCCGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp CGCAGCCGCGGCAGAGGACACGGCTTATTCCCACGAGCCAACCGGGGCTTATTCTGGCCTCCCAGACGCTaGGCACCAGCAGCAACACGT +
Preference number: 4 (lower is better)
Translates to: RSRGRGHGLFPRANRGLFWPPRR*APAATR
Trigger: ACGTGTTGCTGCTGGTGCGCAGCGTCTGGGAGGCCA...GAATAAGCCCCGGTTGGCTCGTGGGAATAAGCCGTGTCCTCTGCCGCGGCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGTTCCAGCGCGCACGCAGATaGCGGGGTGGCCTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: ELESQAMEGILSQSWSQFQRARR*RGGLGR
Trigger: CCTCCCCAGGCCACCCCGCCATCTGCGTGCGCGCTG...GAACTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGAGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531499.2
CDS-3UTR CCA 90 bp GGGCTCAGCAAGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTGCCTCCGACCGGGGCCAGCGTCTaGTGGATGGTATGGTCGATG +
Preference number: 4 (lower is better)
Translates to: GLSKREQASGVTGASLPPTGASV*WMVWSM
Trigger: CATCGACCATACCATCCACCAGACGCTGGCCCCGGT...CGGAGGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCTTGCTGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp CACGAGCCAACCGGGGCTTATTCCCACCCTCGGCGGTCCCAGCGGGCTCAGCAAAAGCACACGCGGTGCTaGTTCTCGTCCTCGATGACC +
Preference number: 4 (lower is better)
Translates to: HEPTGAYSHPRRSQRAQQKHTRC*FSSSMT
Trigger: GGTCATCGAGGACGAGAACCAGCACCGCGTGTGCTT...TTGCTGAGCCCGCTGGGACCGCCGAGGGTGGGAATAAGCCCCGGTTGGCTCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GGGCTCAGCAAGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTGCCTCCGACCAGCCGCTGGATCTaGTCCTTGCGGCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GLSKREQASGVTGASLPPTSRWI*SLRLFW
Trigger: CCAGAAGAGCCGCAAGGACCAGATCCAGCGGCTGGT...CGGAGGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCTTGCTGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GGGCTCAGCAAGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTGCCTCCGGTCTGGAAGGCCGGGTaGAGCTTGGTCAACAGCTCG +
Preference number: 4 (lower is better)
Translates to: GLSKREQASGVTGASLPPVWKAG*SLVNSS
Trigger: CGAGCTGTTGACCAAGCTCCACCCGGCCTTCCAGAC...CGGAGGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCTTGCTGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TCCTGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTCCAGCAGCCCCAGCCTaGCCACATCGCAGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: SWTELHGLFLAVWPFLPPPAAPA*PHRSRG
Trigger: GCCGCGGCTGCGATGTGGCCAGGCTGGGGCTGCTGG...AGGCGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GACGTTTGGACAGGCATTGTCTGTGACAACGGTGGCATTGGAAGGCCCTGGCAGCCAGCAGCCCCAGCCTaGCCACATCGCAGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: DVWTGIVCDNGGIGRPWQPAAPA*PHRSRG
Trigger: GCCGCGGCTGCGATGTGGCCAGGCTGGGGCTGCTGG...CTGCCAGGGCCTTCCAATGCCACCGTTGTCACAGACAATGCCTGTCCAAACGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TCTTCCCTTCCCACCCTGTTGTGGGCGGGCTGCAGTGCTGATCCCACCGGGACGCTGGGCTGTTGCCTCTaGGCATCCCCGATGAAAGGG +
Preference number: 4 (lower is better)
Translates to: SSLPTLLWAGCSADPTGTLGCCL*ASPMKG
Trigger: CCCTTTCATCGGGGATGCCCAGAGGCAACAGCCCAG...CGTCCCGGTGGGATCAGCACTGCAGCCCGCCCACAACAGGGTGGGAAGGGAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp AGGGGAAGAGAACCTCCCCAAGTCATCGGACACCCTCCACAAGGATCTGAGCAGGAAGGCCCTGGCAGCTaGACGCCCAGCCTCCCACCC +
Preference number: 4 (lower is better)
Translates to: RGREPPQVIGHPPQGSEQEGPGS*TPSLPP
Trigger: GGGTGGGAGGCTGGGCGTTCAGCTGCCAGGGCCTTC...CTGCTCAGATCCTTGTGGAGGGTGTCCGATGACTTGGGGAGGTTCTCTTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp CACCGGGACGTTTGGACAGGCATTGTCTGTGACAACGGTGGCATTGGAAGGCCCGCCCTGGGACCACTGTaGGCACCCTTCCCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: HRDVWTGIVCDNGGIGRPALGPL*APFPGA
Trigger: TGCCCCAGGGAAGGGTGCTCACAGTGGTCCCAGGGC...GGGCCTTCCAATGCCACCGTTGTCACAGACAATGCCTGTCCAAACGTCCCGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp TCTTCCCTTCCCACCCTGTTGTGGGCGGGCTGCAGTGCTGATCCCACCGGGACGGAAACGAGTCCTCTCTaGCTCTGCCTGCCCCAGCTA +
Preference number: 4 (lower is better)
Translates to: SSLPTLLWAGCSADPTGTETSPL*LCLPQL
Trigger: TAGCTGGGGCAGGCAGAGTCAGAGAGGACTCGTTTC...CGTCCCGGTGGGATCAGCACTGCAGCCCGCCCACAACAGGGTGGGAAGGGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650645.1
CDS-3UTR GCA 90 bp CAGCGGGCTCAGCAAGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTGCCCTGAGGAAGGGGTTCTaGCTGGGCCTCCCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: QRAQQARAGFRSYRGFPALRKGF*LGLPLV
Trigger: TACCAAAGGGAGGCCCAGGCAGAACCCCTTCCTCAG...GGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCTTGCTGAGCCCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GGGCTCAGCAAGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTGCCTCCGGGGGCCAGCGTCTGGTaGATGGTATGGTCGATGGTA +
Preference number: 4 (lower is better)
Translates to: GLSKREQASGVTGASLPPGASVW*MVWSMV
Trigger: TACCATCGACCATACCATCCACCAGACGCTGGCCCC...CGGAGGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCTTGCTGAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp CACGAGCCAACCGGGGCTTATTCCCACCCTCGGCGGTCCCAGCGGGCTCAGCAATCAGGAAGTAGATGCTaGTCAGCAGCTCCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: HEPTGAYSHPRRSQRAQQSGSRC*SAAPWP
Trigger: GGGCCAAGGAGCTGCTGACCAGCATCTACTTCCTGA...TTGCTGAGCCCGCTGGGACCGCCGAGGGTGGGAATAAGCCCCGGTTGGCTCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TTCCGGAGTTACAGGGGCTTCCCTGCCTCCGCAGCGAGGGAAGCAGGAGGCGGCTCAGGAAGTAGATGCTaGTCAGCAGCTCCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: FRSYRGFPASAAREAGGGSGSRC*SAAPWP
Trigger: GGGCCAAGGAGCTGCTGACCAGCATCTACTTCCTGA...GCCGCCTCCTGCTTCCCTCGCTGCGGAGGCAGGGAAGCCCCTGTAACTCCGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TTCCGGAGTTACAGGGGCTTCCCTGCCTCCGCAGCGAGGGAAGCAGGAGGCGGCGCTGCCATGCCTGGATaGGGTAGTGCTCAAAGCACA +
Preference number: 4 (lower is better)
Translates to: FRSYRGFPASAAREAGGGAAMPG*GSAQST
Trigger: TGTGCTTTGAGCACTACCCCATCCAGGCATGGCAGC...GCCGCCTCCTGCTTCCCTCGCTGCGGAGGCAGGGAAGCCCCTGTAACTCCGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp AGGGGAAGAGAACCTCCCCAAGTCATCGGACACCCTCCACAAGGATCTGAGCAGGGCTCAGGCCTCACGTaGAGCCACCCGCGGAGGACC +
Preference number: 4 (lower is better)
Translates to: RGREPPQVIGHPPQGSEQGSGLT*SHPRRT
Trigger: GGTCCTCCGCGGGTGGCTCCACGTGAGGCCTGAGCC...CTGCTCAGATCCTTGTGGAGGGTGTCCGATGACTTGGGGAGGTTCTCTTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp AGCAGGGGCTGTGCAGTCAAAGCCAAGTGTAGCCCTGGGACCACTGTGAGCACCAGGGCTGGGCATCGCTaGTGGTGGGCAAGACCCTGC +
Preference number: 4 (lower is better)
Translates to: SRGCAVKAKCSPGTTVSTRAGHR*WWARPC
Trigger: GCAGGGTCTTGCCCACCACCAGCGATGCCCAGCCCT...GGTGCTCACAGTGGTCCCAGGGCTACACTTGGCTTTGACTGCACAGCCCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531499.2
CDS-3UTR TCA 90 bp CGCAGCCGCGGCAGAGGACACGGCTTATTCCCACGAGCCAACCGGGGCTTATTCGGTTCTCGTCCTCGATaGCCTCCTCGTGCATCAGGA +
Preference number: 4 (lower is better)
Translates to: RSRGRGHGLFPRANRGLFGSRPR*PPRASG
Trigger: TCCTGATGCACGAGGAGGTCATCGAGGACGAGAACC...GAATAAGCCCCGGTTGGCTCGTGGGAATAAGCCGTGTCCTCTGCCGCGGCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp ACCGGGGCTTATTCCCACCCTCGGCGGTCCCAGCGGGCTCAGCAAGCGAGAGCAGACAGGCATTGTCTGTaGCAACGGTGGCATTGGAAG +
Preference number: 4 (lower is better)
Translates to: TGAYSHPRRSQRAQQARADRHCL*QRWHWK
Trigger: CTTCCAATGCCACCGTTGTCACAGACAATGCCTGTC...TGCTCTCGCTTGCTGAGCCCGCTGGGACCGCCGAGGGTGGGAATAAGCCCCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp AGCAGGGGCTGTGCAGTCAAAGCCAAGTGTAGCCCTGGGACCACTGTGAGCACCCGGCCACCGTCAGGTTaGACAGGTACACGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SRGCAVKAKCSPGTTVSTRPPSG*TGTRPA
Trigger: AGCTGGGCGTGTACCTGTGCAACCTGACGGTGGCCG...GGTGCTCACAGTGGTCCCAGGGCTACACTTGGCTTTGACTGCACAGCCCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp TTCCGGAGTTACAGGGGCTTCCCTGCCTCCGCAGCGAGGGAAGCAGGAGGCGGCGCATCAGGAAGTAGATaGTGGTCAGCAGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: FRSYRGFPASAAREAGGGASGSR*WSAAPW
Trigger: CCAAGGAGCTGCTGACCAGCATCTACTTCCTGATGC...GCCGCCTCCTGCTTCCCTCGCTGCGGAGGCAGGGAAGCCCCTGTAACTCCGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp TCTTCCCTTCCCACCCTGTTGTGGGCGGGCTGCAGTGCTGATCCCACCGGGACGTCAAAGCACACGCGGTaGTGGTTCTCGTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: SSLPTLLWAGCSADPTGTSKHTR*WFSSSM
Trigger: CATCGAGGACGAGAACCAGCACCGCGTGTGCTTTGA...CGTCCCGGTGGGATCAGCACTGCAGCCCGCCCACAACAGGGTGGGAAGGGAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp CGCAGCCGCGGCAGAGGACACGGCTTATTCCCACGAGCCAACCGGGGCTTATTCAGGCAGTGTGGTCTCTaGAACCAGGTGAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: RSRGRGHGLFPRANRGLFRQCGL*NQVRSR
Trigger: CCTGCTCCTCACCTGGTTGCAGAGACCACACTGCCT...GAATAAGCCCCGGTTGGCTCGTGGGAATAAGCCGTGTCCTCTGCCGCGGCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650645.1
CDS-3UTR CCA 90 bp CACATCGCAGCCGCGGCAGAGGACACGGCTTATTCCCACGAGCCAACCGGGGCTCAGTTTGGAAACAGCTaGATGGACCCCCACCTGTGC +
Preference number: 4 (lower is better)
Translates to: HIAAAAEDTAYSHEPTGAQFGNS*MDPHLC
Trigger: GCACAGGTGGGGGTCCATCCAGCTGTTTCCAAACTG...AGCCCCGGTTGGCTCGTGGGAATAAGCCGTGTCCTCTGCCGCGGCTGCGATGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GGGGTTCTGCCTGGGCCTCCCTTTGGTAGATTCCAGAAATGTTTGCTGATGCCACTCTTCTGGGTGCCGTaGCTCCGGCGCACGGCGCGC +
Preference number: 4 (lower is better)
Translates to: GVLPGPPFGRFQKCLLMPLFWVP*LRRTAR
Trigger: GCGCGCCGTGCGCCGGAGCCACGGCACCCAGAAGAG...TGGCATCAGCAAACATTTCTGGAATCTACCAAAGGGAGGCCCAGGCAGAACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp CAGCGGGCTCAGCAAGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTGCCGGGCTAGCATTTCTGTaGAGGTGGGCAGGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: QRAQQARAGFRSYRGFPAGLAFL*RWAGLL
Trigger: CAGAAGACCTGCCCACCTCCACAGAAATGCTAGCCC...GGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCTTGCTGAGCCCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp TTCCGGAGTTACAGGGGCTTCCCTGCCTCCGCAGCGAGGGAAGCAGGAGGCGGCAGAGGAAGCCCACGCTaGTGTAGATGTTCTCGTACA +
Preference number: 4 (lower is better)
Translates to: FRSYRGFPASAAREAGGGRGSPR*CRCSRT
Trigger: TGTACGAGAACATCTACATCAGCGTGGGCTTCCTCT...GCCGCCTCCTGCTTCCCTCGCTGCGGAGGCAGGGAAGCCCCTGTAACTCCGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp CACCGGGACGTTTGGACAGGCATTGTCTGTGACAACGGTGGCATTGGAAGGCCCGGTGGGTGGTCTCGCTaGCGAAGCAGTAGAGCACGG +
Preference number: 4 (lower is better)
Translates to: HRDVWTGIVCDNGGIGRPGGWSR*RSSRAR
Trigger: CCGTGCTCTACTGCTTCGTCAGCGAGACCACCCACC...GGGCCTTCCAATGCCACCGTTGTCACAGACAATGCCTGTCCAAACGTCCCGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp GGGCTCAGCAAGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTGCCTCCGTTAGCCTCTTGGTTCTaGAGAACTCGAGTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GLSKREQASGVTGASLPPLASWF*RTRVPG
Trigger: GCCTGGGACTCGAGTTCTTCAGAACCAAGAGGCTAA...CGGAGGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCTTGCTGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp CACATCGCAGCCGCGGCAGAGGACACGGCTTATTCCCACGAGCCAACCGGGGCTTTAGCCTCTTGGTTCTaGAGAACTCGAGTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: HIAAAAEDTAYSHEPTGALASWF*RTRVPG
Trigger: GCCTGGGACTCGAGTTCTTCAGAACCAAGAGGCTAA...AGCCCCGGTTGGCTCGTGGGAATAAGCCGTGTCCTCTGCCGCGGCTGCGATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp ACCGGGGCTTATTCCCACCCTCGGCGGTCCCAGCGGGCTCAGCAAGCGAGAGCATGGAATGAGGAGGCATaGAGGCTTCCACCAATGTCA +
Preference number: 4 (lower is better)
Translates to: TGAYSHPRRSQRAQQARAWNEEA*RLPPMS
Trigger: TGACATTGGTGGAAGCCTTCATGCCTCCTCATTCCA...TGCTCTCGCTTGCTGAGCCCGCTGGGACCGCCGAGGGTGGGAATAAGCCCCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp CACCGGGACGTTTGGACAGGCATTGTCTGTGACAACGGTGGCATTGGAAGGCCCGATGGCGCGCTGCCATaGCTGGATGGGGTAGTGCTC +
Preference number: 4 (lower is better)
Translates to: HRDVWTGIVCDNGGIGRPDGALP*LDGVVL
Trigger: GAGCACTACCCCATCCAGGCATGGCAGCGCGCCATC...GGGCCTTCCAATGCCACCGTTGTCACAGACAATGCCTGTCCAAACGTCCCGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp AAATCCTGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGTGCGGCTCTTCTGGGTaGCGTGGCTCCGGCGCACGG +
Preference number: 4 (lower is better)
Translates to: KSWTELHGLFLAVWPFLPCGSSG*RGSGAR
Trigger: CCGTGCGCCGGAGCCACGGCACCCAGAAGAGCCGCA...CGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp GGGGTTCTGCCTGGGCCTCCCTTTGGTAGATTCCAGAAATGTTTGCTGATGCCACAGGCTAGGCCAACCTaGCCGTGGGGAACCCGCCCG +
Preference number: 4 (lower is better)
Translates to: GVLPGPPFGRFQKCLLMPQARPT*PWGTRP
Trigger: CGGGCGGGTTCCCCACGGGCAGGTTGGCCTAGCCTG...TGGCATCAGCAAACATTTCTGGAATCTACCAAAGGGAGGCCCAGGCAGAACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp CAGCGGGCTCAGCAAGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTGCCTCCTCACACTCCCCATaGACAAACTCTGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: QRAQQARAGFRSYRGFPASSHSP*TNSAGS
Trigger: GCTTCCTGCAGAGTTTGTGCATGGGGAGTGTGAGGA...GGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCTTGCTGAGCCCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp ACCGGGGCTTATTCCCACCCTCGGCGGTCCCAGCGGGCTCAGCAAGCGAGAGCAAATCCTGGACTGAGTTaGATGGGCTCTTCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: TGAYSHPRRSQRAQQARANPGLS*MGSSWL
Trigger: CAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGATT...TGCTCTCGCTTGCTGAGCCCGCTGGGACCGCCGAGGGTGGGAATAAGCCCCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GAAGAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGCATGGGCTCAGGGACTaGGCCTGTCTCTCCACCGCC +
Preference number: 4 (lower is better)
Translates to: EELESQAMEGILSQSWSQHGLRD*ACLSTA
Trigger: GGCGGTGGAGAGACAGGCCCAGTCCCTGAGCCCATG...CTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGAGTTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp AGGGGAAGAGAACCTCCCCAAGTCATCGGACACCCTCCACAAGGATCTGAGCAGCATGGGCTCAGGGACTaGGCCTGTCTCTCCACCGCC +
Preference number: 4 (lower is better)
Translates to: RGREPPQVIGHPPQGSEQHGLRD*ACLSTA
Trigger: GGCGGTGGAGAGACAGGCCCAGTCCCTGAGCCCATG...CTGCTCAGATCCTTGTGGAGGGTGTCCGATGACTTGGGGAGGTTCTCTTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp CACGAGCCAACCGGGGCTTATTCCCACCCTCGGCGGTCCCAGCGGGCTCAGCAAGGATGGTATGGTCGATaGTACAGCTCATCGAGGAGT +
Preference number: 4 (lower is better)
Translates to: HEPTGAYSHPRRSQRAQQGWYGR*YSSSRS
Trigger: ACTCCTCGATGAGCTGTACCATCGACCATACCATCC...TTGCTGAGCCCGCTGGGACCGCCGAGGGTGGGAATAAGCCCCGGTTGGCTCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp AGCAGGGGCTGTGCAGTCAAAGCCAAGTGTAGCCCTGGGACCACTGTGAGCACCGTCTGGAAGGCCGGGTaGAGCTTGGTCAACAGCTCG +
Preference number: 4 (lower is better)
Translates to: SRGCAVKAKCSPGTTVSTVWKAG*SLVNSS
Trigger: CGAGCTGTTGACCAAGCTCCACCCGGCCTTCCAGAC...GGTGCTCACAGTGGTCCCAGGGCTACACTTGGCTTTGACTGCACAGCCCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp CACCGGGACGTTTGGACAGGCATTGTCTGTGACAACGGTGGCATTGGAAGGCCCGGCATTGGAAGGCCCTaGCAGCTGAACGCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: HRDVWTGIVCDNGGIGRPGIGRP*QLNAQP
Trigger: AGGCTGGGCGTTCAGCTGCCAGGGCCTTCCAATGCC...GGGCCTTCCAATGCCACCGTTGTCACAGACAATGCCTGTCCAAACGTCCCGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp CACGAGCCAACCGGGGCTTATTCCCACCCTCGGCGGTCCCAGCGGGCTCAGCAAATCCTTAGTCAGAGCTaGTCCCAGTTCACTGACCAG +
Preference number: 4 (lower is better)
Translates to: HEPTGAYSHPRRSQRAQQILSQS*SQFTDQ
Trigger: CTGGTCAGTGAACTGGGACCAGCTCTGACTAAGGAT...TTGCTGAGCCCGCTGGGACCGCCGAGGGTGGGAATAAGCCCCGGTTGGCTCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp CAGCGGGCTCAGCAAGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTGCCTCGAGTCCCAGGCCATaGAAGGCATCCTTAGTCAGA +
Preference number: 4 (lower is better)
Translates to: QRAQQARAGFRSYRGFPASSPRP*KASLVR
Trigger: TCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGA...GGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCTTGCTGAGCCCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GGGCTCAGCAAGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTGCCTCCGCTCTTCTTGGCTGTGTaGCCATTTCTGCCGCCTTCA +
Preference number: 4 (lower is better)
Translates to: GLSKREQASGVTGASLPPLFLAV*PFLPPS
Trigger: TGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGAG...CGGAGGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCTTGCTGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp CGCAGCCGCGGCAGAGGACACGGCTTATTCCCACGAGCCAACCGGGGCTTATTCAGAAGTGGTAGGCGTTaGAAACGCCCTTGGCGAAGT +
Preference number: 4 (lower is better)
Translates to: RSRGRGHGLFPRANRGLFRSGRR*KRPWRS
Trigger: ACTTCGCCAAGGGCGTTTTCAACGCCTACCACTTCT...GAATAAGCCCCGGTTGGCTCGTGGGAATAAGCCGTGTCCTCTGCCGCGGCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp AGGGGAAGAGAACCTCCCCAAGTCATCGGACACCCTCCACAAGGATCTGAGCAGGGTGGGTGGTCTCGCTaGCGAAGCAGTAGAGCACGG +
Preference number: 4 (lower is better)
Translates to: RGREPPQVIGHPPQGSEQGGWSR*RSSRAR
Trigger: CCGTGCTCTACTGCTTCGTCAGCGAGACCACCCACC...CTGCTCAGATCCTTGTGGAGGGTGTCCGATGACTTGGGGAGGTTCTCTTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp AAATCCTGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGGGCGGGCTGCAGTGCTaGTCCCACCGGGACGTTTGG +
Preference number: 4 (lower is better)
Translates to: KSWTELHGLFLAVWPFLPGGLQC*SHRDVW
Trigger: CCAAACGTCCCGGTGGGATCAGCACTGCAGCCCGCC...CGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGATTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp TTCCGGAGTTACAGGGGCTTCCCTGCCTCCGCAGCGAGGGAAGCAGGAGGCGGCTTCCACCAATGTCACTaGCCCAGTAAAATCCTGGAC +
Preference number: 4 (lower is better)
Translates to: FRSYRGFPASAAREAGGGFHQCH*PSKILD
Trigger: GTCCAGGATTTTACTGGGTCAGTGACATTGGTGGAA...GCCGCCTCCTGCTTCCCTCGCTGCGGAGGCAGGGAAGCCCCTGTAACTCCGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp CACGAGCCAACCGGGGCTTATTCCCACCCTCGGCGGTCCCAGCGGGCTCAGCAAACTCTTGACAGTAAATaGGACTGCCCTCAGCTCATC +
Preference number: 4 (lower is better)
Translates to: HEPTGAYSHPRRSQRAQQTLDSK*DCPQLI
Trigger: GATGAGCTGAGGGCAGTCTCATTTACTGTCAAGAGT...TTGCTGAGCCCGCTGGGACCGCCGAGGGTGGGAATAAGCCCCGGTTGGCTCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp GTTAGCCTCTTGGTTCTGAAGAACTCGAGTCCCAGGCCATGGAAGGCATCCTTACCGCGCCCCTCCTCTTaGCAGCGCGCACGCAGATGG +
Preference number: 4 (lower is better)
Translates to: VSLLVLKNSSPRPWKASLPRPSS*QRARRW
Trigger: CCATCTGCGTGCGCGCTGGCAAGAGGAGGGGCGCGG...TAAGGATGCCTTCCATGGCCTGGGACTCGAGTTCTTCAGAACCAAGAGGCTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531499.2
CDS-3UTR GCA 90 bp GAAGAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGCGGCCACCGTCAGGTTaGACAGGTACACGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: EELESQAMEGILSQSWSQRPPSG*TGTRPA
Trigger: AGCTGGGCGTGTACCTGTGCAACCTGACGGTGGCCG...CTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGAGTTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp AGCAGGGGCTGTGCAGTCAAAGCCAAGTGTAGCCCTGGGACCACTGTGAGCACCGACCAGTTGTCGTGCTaGAGCACGTACTGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SRGCAVKAKCSPGTTVSTDQLSC*STYCSQ
Trigger: CTGGCTGCAGTACGTGCTGCAGCACGACAACTGGTC...GGTGCTCACAGTGGTCCCAGGGCTACACTTGGCTTTGACTGCACAGCCCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp TGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACCCAGCACGGCGCGCAGGATaGCCTGGTAGGACGCCAGCA +
Preference number: 4 (lower is better)
Translates to: WLELGSSSAYNSLNSPNPARRAG*PGRTPA
Trigger: TGCTGGCGTCCTACCAGGGCATCCTGCGCGCCGTGC...TGGGTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp CTGTGTGGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCCTCCTCTAGGAAGGGCACGGCGCGCAGGATaGCCTGGTAGGACGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LCGHFCRLQTWSLPPLGRARRAG*PGRTPA
Trigger: TGCTGGCGTCCTACCAGGGCATCCTGCGCGCCGTGC...CCTTCCTAGAGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp CACCGGGACGTTTGGACAGGCATTGTCTGTGACAACGGTGGCATTGGAAGGCCCGCTGGATCTGGTCCTTaGGGCTCTTCTGGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: HRDVWTGIVCDNGGIGRPAGSGP*GSSGCR
Trigger: ACGGCACCCAGAAGAGCCGCAAGGACCAGATCCAGC...GGGCCTTCCAATGCCACCGTTGTCACAGACAATGCCTGTCCAAACGTCCCGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp GTTAGCCTCTTGGTTCTGAAGAACTCGAGTCCCAGGCCATGGAAGGCATCCTTACAGGCTAGGCCAACCTaGCCGTGGGGAACCCGCCCG +
Preference number: 4 (lower is better)
Translates to: VSLLVLKNSSPRPWKASLQARPT*PWGTRP
Trigger: CGGGCGGGTTCCCCACGGGCAGGTTGGCCTAGCCTG...TAAGGATGCCTTCCATGGCCTGGGACTCGAGTTCTTCAGAACCAAGAGGCTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp GACGTTTGGACAGGCATTGTCTGTGACAACGGTGGCATTGGAAGGCCCTGGCAGTTACAGGGGCTTCCCTaGCTCCGCAGCGAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: DVWTGIVCDNGGIGRPWQLQGLP*LRSEGS
Trigger: GCTTCCCTCGCTGCGGAGGCAGGGAAGCCCCTGTAA...CTGCCAGGGCCTTCCAATGCCACCGTTGTCACAGACAATGCCTGTCCAAACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp GAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGTTCTTACAGGGGCTTCCCTaGCTCCGCAGCGAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: ELESQAMEGILSQSWSQFLQGLP*LRSEGS
Trigger: GCTTCCCTCGCTGCGGAGGCAGGGAAGCCCCTGTAA...GAACTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GGGGTTCTGCCTGGGCCTCCCTTTGGTAGATTCCAGAAATGTTTGCTGATGCCAACGCAGATGGCGGGGTaGCCTGGGGAGGTCTTCGGG +
Preference number: 4 (lower is better)
Translates to: GVLPGPPFGRFQKCLLMPTQMAG*PGEVFG
Trigger: CCCGAAGACCTCCCCAGGCCACCCCGCCATCTGCGT...TGGCATCAGCAAACATTTCTGGAATCTACCAAAGGGAGGCCCAGGCAGAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531499.2
CDS-3UTR CCA 90 bp AGCAGGGGCTGTGCAGTCAAAGCCAAGTGTAGCCCTGGGACCACTGTGAGCACCGGGCATCGCTGGTGGTaGGCAAGACCCCTACTTCTT +
Preference number: 4 (lower is better)
Translates to: SRGCAVKAKCSPGTTVSTGHRWW*ARPLLL
Trigger: AAGAAGTAGGGGTCTTGCCCACCACCAGCGATGCCC...GGTGCTCACAGTGGTCCCAGGGCTACACTTGGCTTTGACTGCACAGCCCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTTCAGGGCCACACTCCTCATaGGCTCAGGGACTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: WTELHGLFLAVWPFLPPSGPHSS*AQGLGL
Trigger: CAGGCCCAGTCCCTGAGCCCATGAGGAGTGTGGCCC...TGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp AGCAGGGGCTGTGCAGTCAAAGCCAAGTGTAGCCCTGGGACCACTGTGAGCACCAAGCACACGCGGTGCTaGTTCTCGTCCTCGATGACC +
Preference number: 4 (lower is better)
Translates to: SRGCAVKAKCSPGTTVSTKHTRC*FSSSMT
Trigger: GGTCATCGAGGACGAGAACCAGCACCGCGTGTGCTT...GGTGCTCACAGTGGTCCCAGGGCTACACTTGGCTTTGACTGCACAGCCCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGTTCCTGAGCACCAGCCGCTaGATCTGGTCCTTGCGGCTC +
Preference number: 4 (lower is better)
Translates to: ELESQAMEGILSQSWSQFLSTSR*IWSLRL
Trigger: GAGCCGCAAGGACCAGATCCAGCGGCTGGTGCTCAG...GAACTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGAGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp AGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGTTCACTGACCAGAAGGGGTGGGCAGGTCTTCTaGAGCAGCAGGCGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: RPWKASLVRAGPSSLTRRGGQVF*SSRRLS
Trigger: GGAGAGCCGCCTGCTGCTCCAGAAGACCTGCCCACC...CCTTCTGGTCAGTGAACTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp CACATCGCAGCCGCGGCAGAGGACACGGCTTATTCCCACGAGCCAACCGGGGCTGACCCAGTAAAATCCTaGACTGAGTTGCATGGGCTC +
Preference number: 4 (lower is better)
Translates to: HIAAAAEDTAYSHEPTGADPVKS*TELHGL
Trigger: GAGCCCATGCAACTCAGTCCAGGATTTTACTGGGTC...AGCCCCGGTTGGCTCGTGGGAATAAGCCGTGTCCTCTGCCGCGGCTGCGATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR CAA 72 bp TGCAGTGCTGATCCCACCGGGACGTTTGGACAGGCATaGTCTGTGACAACGGTGGCATTGGAAGGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: CSADPTGTFGQA*SVTTVALEGPG
Trigger: GCCAGGGCCTTCCAATGCCACCGTTGTCACAGACAATGCCTGTCCAAACGTCCCGGTGGGATCAGCACTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp GAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGTTCGCTCGTTCCGGGCCTTaGTCTGCAGGTAGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: ELESQAMEGILSQSWSQFARSGP*SAGSRS
Trigger: ACTTCGGCTACCTGCAGATCAAGGCCCGGAACGAGC...GAACTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGAGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp TCCTGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTGGAAGCGGTAGTAGTTaGTGGCGCGCTGCCATGCCT +
Preference number: 4 (lower is better)
Translates to: SWTELHGLFLAVWPFLPPGSGSS*WRAAMP
Trigger: AGGCATGGCAGCGCGCCATCAACTACTACCGCTTCC...AGGCGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp AGGGGAAGAGAACCTCCCCAAGTCATCGGACACCCTCCACAAGGATCTGAGCAGCCCTCCACAAGGATCTaGGCAGGGGCTGTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: RGREPPQVIGHPPQGSEQPSTRI*AGAVQS
Trigger: TGACTGCACAGCCCCTGCTCAGATCCTTGTGGAGGG...CTGCTCAGATCCTTGTGGAGGGTGTCCGATGACTTGGGGAGGTTCTCTTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp ACCGGGGCTTATTCCCACCCTCGGCGGTCCCAGCGGGCTCAGCAAGCGAGAGCAAGTAAAATCCTGGACTaGGTTGCATGGGCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: TGAYSHPRRSQRAQQARASKILD*VAWALL
Trigger: AAGAAGAGCCCATGCAACTCAGTCCAGGATTTTACT...TGCTCTCGCTTGCTGAGCCCGCTGGGACCGCCGAGGGTGGGAATAAGCCCCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp TCTTCCCTTCCCACCCTGTTGTGGGCGGGCTGCAGTGCTGATCCCACCGGGACGTTCCACCAATGTCACTaGCCCAGTAAAATCCTGGAC +
Preference number: 4 (lower is better)
Translates to: SSLPTLLWAGCSADPTGTFHQCH*PSKILD
Trigger: GTCCAGGATTTTACTGGGTCAGTGACATTGGTGGAA...CGTCCCGGTGGGATCAGCACTGCAGCCCGCCCACAACAGGGTGGGAAGGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp CGCAGCCGCGGCAGAGGACACGGCTTATTCCCACGAGCCAACCGGGGCTTATTCTGGAATGAGGAGGCATaGAGGCTTCCACCAATGTCA +
Preference number: 4 (lower is better)
Translates to: RSRGRGHGLFPRANRGLFWNEEA*RLPPMS
Trigger: TGACATTGGTGGAAGCCTTCATGCCTCCTCATTCCA...GAATAAGCCCCGGTTGGCTCGTGGGAATAAGCCGTGTCCTCTGCCGCGGCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp CACATCGCAGCCGCGGCAGAGGACACGGCTTATTCCCACGAGCCAACCGGGGCTACTCTTGACAGTAAATaGGACTGCCCTCAGCTCATC +
Preference number: 4 (lower is better)
Translates to: HIAAAAEDTAYSHEPTGATLDSK*DCPQLI
Trigger: GATGAGCTGAGGGCAGTCTCATTTACTGTCAAGAGT...AGCCCCGGTTGGCTCGTGGGAATAAGCCGTGTCCTCTGCCGCGGCTGCGATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp AGCAGGGGCTGTGCAGTCAAAGCCAAGTGTAGCCCTGGGACCACTGTGAGCACCTCAAAGCACACGCGGTaGTGGTTCTCGTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: SRGCAVKAKCSPGTTVSTSKHTR*WFSSSM
Trigger: CATCGAGGACGAGAACCAGCACCGCGTGTGCTTTGA...GGTGCTCACAGTGGTCCCAGGGCTACACTTGGCTTTGACTGCACAGCCCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp TGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTTCAGATGGCGCGCTGCCATaGCTGGATGGGGTAGTGCTC +
Preference number: 4 (lower is better)
Translates to: WTELHGLFLAVWPFLPPSDGALP*LDGVVL
Trigger: GAGCACTACCCCATCCAGGCATGGCAGCGCGCCATC...TGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp AGGGGAAGAGAACCTCCCCAAGTCATCGGACACCCTCCACAAGGATCTGAGCAGGCTGGATCTGGTCCTTaGGGCTCTTCTGGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: RGREPPQVIGHPPQGSEQAGSGP*GSSGCR
Trigger: ACGGCACCCAGAAGAGCCGCAAGGACCAGATCCAGC...CTGCTCAGATCCTTGTGGAGGGTGTCCGATGACTTGGGGAGGTTCTCTTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp CGCAGCCGCGGCAGAGGACACGGCTTATTCCCACGAGCCAACCGGGGCTTATTCCTGTGTGGCCATTTCTaGCGCCTTCAAACTTGGTCA +
Preference number: 4 (lower is better)
Translates to: RSRGRGHGLFPRANRGLFLCGHF*RLQTWS
Trigger: TGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAG...GAATAAGCCCCGGTTGGCTCGTGGGAATAAGCCGTGTCCTCTGCCGCGGCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp CGCAGCCGCGGCAGAGGACACGGCTTATTCCCACGAGCCAACCGGGGCTTATTCAATCCTGGACTGAGTTaGATGGGCTCTTCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: RSRGRGHGLFPRANRGLFNPGLS*MGSSWL
Trigger: CAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGATT...GAATAAGCCCCGGTTGGCTCGTGGGAATAAGCCGTGTCCTCTGCCGCGGCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp AAATCCTGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGGGGCCACACTCCTCATaGGCTCAGGGACTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: KSWTELHGLFLAVWPFLPGPHSS*AQGLGL
Trigger: CAGGCCCAGTCCCTGAGCCCATGAGGAGTGTGGCCC...CGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp AGCAGGGGCTGTGCAGTCAAAGCCAAGTGTAGCCCTGGGACCACTGTGAGCACCCCAGCGTCTGGTGGATaGTATGGTCGATGGTACAGC +
Preference number: 4 (lower is better)
Translates to: SRGCAVKAKCSPGTTVSTPASGG*YGRWYS
Trigger: GCTGTACCATCGACCATACCATCCACCAGACGCTGG...GGTGCTCACAGTGGTCCCAGGGCTACACTTGGCTTTGACTGCACAGCCCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGTTCACCGGGGCCAGCGTCTaGTGGATGGTATGGTCGATG +
Preference number: 4 (lower is better)
Translates to: ELESQAMEGILSQSWSQFTGASV*WMVWSM
Trigger: CATCGACCATACCATCCACCAGACGCTGGCCCCGGT...GAACTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp AGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGTTCACTGACCAGAAGGAGAGGGACAGGCAGTTaGCCGGGAAGCCCACCACCA +
Preference number: 4 (lower is better)
Translates to: RPWKASLVRAGPSSLTRRRGTGS*PGSPPP
Trigger: TGGTGGTGGGCTTCCCGGCCAACTGCCTGTCCCTCT...CCTTCTGGTCAGTGAACTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTTCAAGGGTCCGGAACTGGTaGAAGCGGAAGGGATGGGCC +
Preference number: 4 (lower is better)
Translates to: WTELHGLFLAVWPFLPPSRVRNW*KRKGWA
Trigger: GGCCCATCCCTTCCGCTTCCACCAGTTCCGGACCCT...TGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GAAGAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGACCAGCCGCTGGATCTaGTCCTTGCGGCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: EELESQAMEGILSQSWSQTSRWI*SLRLFW
Trigger: CCAGAAGAGCCGCAAGGACCAGATCCAGCGGCTGGT...CTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGAGTTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACCCATGGCGAAGTCGCAGCTaGCCTCCCAGACGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: WLELGSSSAYNSLNSPNPWRSRS*PPRRCA
Trigger: TGCGCAGCGTCTGGGAGGCCAGCTGCGACTTCGCCA...TGGGTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GGGGTTCTGCCTGGGCCTCCCTTTGGTAGATTCCAGAAATGTTTGCTGATGCCATGGCGAAGTCGCAGCTaGCCTCCCAGACGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: GVLPGPPFGRFQKCLLMPWRSRS*PPRRCA
Trigger: TGCGCAGCGTCTGGGAGGCCAGCTGCGACTTCGCCA...TGGCATCAGCAAACATTTCTGGAATCTACCAAAGGGAGGCCCAGGCAGAACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCCTCCTTCGGGCTCCTCACCCTaGGCCCCGCTTTTCCCGGAG +
Preference number: 4 (lower is better)
Translates to: SSWLCGHFCRLQTWSLPPSGSSP*APLFPE
Trigger: CTCCGGGAAAAGCGGGGCCCAGGGTGAGGAGCCCGA...AGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp AGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGTTCACTGACCAGAAGGGAACCCGCCCGACCCTaGCGAGTTAGGGGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: RPWKASLVRAGPSSLTRREPARP*RVRGLE
Trigger: TTCCAGACCCCTAACTCGCCAGGGTCGGGCGGGTTC...CCTTCTGGTCAGTGAACTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TTATGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACAGGCCAACCTGCCCGTaGGGAACCCGCCCGACCCTG +
Preference number: 4 (lower is better)
Translates to: LWLELGSSSAYNSLNSPNRPTCP*GTRPTL
Trigger: CAGGGTCGGGCGGGTTCCCCACGGGCAGGTTGGCCT...GTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCATAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTTCAGGCATTGGAAGGCCCTaGCAGCTGAACGCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: WTELHGLFLAVWPFLPPSGIGRP*QLNAQP
Trigger: AGGCTGGGCGTTCAGCTGCCAGGGCCTTCCAATGCC...TGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp TGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTTCACCCCATCTTTGGGCCTaGAGGGGCCACACTCCTCAT +
Preference number: 4 (lower is better)
Translates to: WTELHGLFLAVWPFLPPSPHLWA*RGHTPH
Trigger: ATGAGGAGTGTGGCCCCTTCAGGCCCAAAGATGGGG...TGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp CTGTGTGGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCCTCCTCTAGGAAGGCAGGACAGGTCGCCGTaGGACCAGTTGTCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LCGHFCRLQTWSLPPLGRQDRSP*DQLSCC
Trigger: GCAGCACGACAACTGGTCTCACGGCGACCTGTCCTG...CCTTCCTAGAGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp TCCTGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTGGTTCTCGTCCTCGATaGCCTCCTCGTGCATCAGGA +
Preference number: 4 (lower is better)
Translates to: SWTELHGLFLAVWPFLPPGSRPR*PPRASG
Trigger: TCCTGATGCACGAGGAGGTCATCGAGGACGAGAACC...AGGCGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp GAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGTTCGGTTCTCGTCCTCGATaGCCTCCTCGTGCATCAGGA +
Preference number: 4 (lower is better)
Translates to: ELESQAMEGILSQSWSQFGSRPR*PPRASG
Trigger: TCCTGATGCACGAGGAGGTCATCGAGGACGAGAACC...GAACTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGAGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp AGCAGGGGCTGTGCAGTCAAAGCCAAGTGTAGCCCTGGGACCACTGTGAGCACCTTAGCCTCTTGGTTCTaGAGAACTCGAGTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SRGCAVKAKCSPGTTVSTLASWF*RTRVPG
Trigger: GCCTGGGACTCGAGTTCTTCAGAACCAAGAGGCTAA...GGTGCTCACAGTGGTCCCAGGGCTACACTTGGCTTTGACTGCACAGCCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp CAGCGGGCTCAGCAAGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTGCCAGTAAAATCCTGGACTaGGTTGCATGGGCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: QRAQQARAGFRSYRGFPASKILD*VAWALL
Trigger: AAGAAGAGCCCATGCAACTCAGTCCAGGATTTTACT...GGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCTTGCTGAGCCCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp CGCAGCCGCGGCAGAGGACACGGCTTATTCCCACGAGCCAACCGGGGCTTATTCACTCTTGACAGTAAATaGGACTGCCCTCAGCTCATC +
Preference number: 4 (lower is better)
Translates to: RSRGRGHGLFPRANRGLFTLDSK*DCPQLI
Trigger: GATGAGCTGAGGGCAGTCTCATTTACTGTCAAGAGT...GAATAAGCCCCGGTTGGCTCGTGGGAATAAGCCGTGTCCTCTGCCGCGGCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp CTGTGTGGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCCTCCTCTAGGAAGGCGGCCACCGTCAGGTTaGACAGGTACACGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: LCGHFCRLQTWSLPPLGRRPPSG*TGTRPA
Trigger: AGCTGGGCGTGTACCTGTGCAACCTGACGGTGGCCG...CCTTCCTAGAGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp GAAGAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGTCTCGTACAGGAGGATaGCGCACACCTGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: EELESQAMEGILSQSWSQSRTGG*RTPGRT
Trigger: TGTCCTGCCAGGTGTGCGGCATCCTCCTGTACGAGA...CTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGAGTTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp TGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACCCAAGCGGTCCACGGAGATaGAGCAGAGGAAGCCCACGC +
Preference number: 4 (lower is better)
Translates to: WLELGSSSAYNSLNSPNPSGPRR*SRGSPR
Trigger: GCGTGGGCTTCCTCTGCTGCATCTCCGTGGACCGCT...TGGGTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp AGCAGGGGCTGTGCAGTCAAAGCCAAGTGTAGCCCTGGGACCACTGTGAGCACCGCATCAGGAAGTAGATaGTGGTCAGCAGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SRGCAVKAKCSPGTTVSTASGSR*WSAAPW
Trigger: CCAAGGAGCTGCTGACCAGCATCTACTTCCTGATGC...GGTGCTCACAGTGGTCCCAGGGCTACACTTGGCTTTGACTGCACAGCCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp TGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACCCATGGCCTCCCAGACGCTaGGCACCAGCAGCAACACGT +
Preference number: 4 (lower is better)
Translates to: WLELGSSSAYNSLNSPNPWPPRR*APAATR
Trigger: ACGTGTTGCTGCTGGTGCGCAGCGTCTGGGAGGCCA...TGGGTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp GAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGTTCCTGAGGAAGGGGTTCTaGCTGGGCCTCCCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: ELESQAMEGILSQSWSQFLRKGF*LGLPLV
Trigger: TACCAAAGGGAGGCCCAGGCAGAACCCCTTCCTCAG...GAACTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp GAAGAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGCTGAGGAAGGGGTTCTaGCTGGGCCTCCCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: EELESQAMEGILSQSWSQLRKGF*LGLPLV
Trigger: TACCAAAGGGAGGCCCAGGCAGAACCCCTTCCTCAG...CTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGAGTTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp GAAGAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGCTGAGTGAGGGTCCATaGCCTGCCTTTCACGCTGAC +
Preference number: 4 (lower is better)
Translates to: EELESQAMEGILSQSWSQLSEGP*PAFHAD
Trigger: GTCAGCGTGAAAGGCAGGGCATGGACCCTCACTCAG...CTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGAGTTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531499.2
CDS-3UTR CCA 90 bp TTATGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACGATGGCGGGGTGGCCTaGGGAGGTCTTCGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: LWLELGSSSAYNSLNSPNDGGVA*GGLRVP
Trigger: AGGGACCCGAAGACCTCCCCAGGCCACCCCGCCATC...GTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531499.2
CDS-3UTR CCA 90 bp AAATCCTGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGAGCTCTACCAAGGGCTaGGCATCGCTGGTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: KSWTELHGLFLAVWPFLPSSTKG*ASLVVG
Trigger: GCCCACCACCAGCGATGCCCAGCCCTTGGTAGAGCT...CGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp AGCAGGGGCTGTGCAGTCAAAGCCAAGTGTAGCCCTGGGACCACTGTGAGCACCTCACAACCCGCAGTTTaGAAACAGCTGGATGGACCC +
Preference number: 4 (lower is better)
Translates to: SRGCAVKAKCSPGTTVSTSQPAV*KQLDGP
Trigger: GGGTCCATCCAGCTGTTTCCAAACTGCGGGTTGTGA...GGTGCTCACAGTGGTCCCAGGGCTACACTTGGCTTTGACTGCACAGCCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GAAGAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGGGGCATCGCTGGTGGTaGGCAAGACCCCTACTTCTT +
Preference number: 4 (lower is better)
Translates to: EELESQAMEGILSQSWSQGHRWW*ARPLLL
Trigger: AAGAAGTAGGGGTCTTGCCCACCACCAGCGATGCCC...CTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGAGTTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACCCAAGGGCTGGGCATCGCTaGTGGTGGGCAAGACCCCTA +
Preference number: 4 (lower is better)
Translates to: WLELGSSSAYNSLNSPNPRAGHR*WWARPL
Trigger: TAGGGGTCTTGCCCACCACCAGCGATGCCCAGCCCT...TGGGTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GAAGAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGGGGGCCAGCGTCTGGTaGATGGTATGGTCGATGGTA +
Preference number: 4 (lower is better)
Translates to: EELESQAMEGILSQSWSQGASVW*MVWSMV
Trigger: TACCATCGACCATACCATCCACCAGACGCTGGCCCC...CTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGAGTTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp CTGTGTGGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCCTCCTCTAGGAAGGAGGGTCCGGAACTGGTaGAAGCGGAAGGGATGGGCC +
Preference number: 4 (lower is better)
Translates to: LCGHFCRLQTWSLPPLGRRVRNW*KRKGWA
Trigger: GGCCCATCCCTTCCGCTTCCACCAGTTCCGGACCCT...CCTTCCTAGAGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp AGGGGAAGAGAACCTCCCCAAGTCATCGGACACCCTCCACAAGGATCTGAGCAGTTCAGGGTCCGGAACTaGTGGAAGCGGAAGGGATGG +
Preference number: 4 (lower is better)
Translates to: RGREPPQVIGHPPQGSEQFRVRN*WKRKGW
Trigger: CCATCCCTTCCGCTTCCACCAGTTCCGGACCCTGAA...CTGCTCAGATCCTTGTGGAGGGTGTCCGATGACTTGGGGAGGTTCTCTTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GACGTTTGGACAGGCATTGTCTGTGACAACGGTGGCATTGGAAGGCCCTGGCAGTTCAGGGTCCGGAACTaGTGGAAGCGGAAGGGATGG +
Preference number: 4 (lower is better)
Translates to: DVWTGIVCDNGGIGRPWQFRVRN*WKRKGW
Trigger: CCATCCCTTCCGCTTCCACCAGTTCCGGACCCTGAA...CTGCCAGGGCCTTCCAATGCCACCGTTGTCACAGACAATGCCTGTCCAAACGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp CACCGGGACGTTTGGACAGGCATTGTCTGTGACAACGGTGGCATTGGAAGGCCCGCTGCCATGCCTGGATaGGGTAGTGCTCAAAGCACA +
Preference number: 4 (lower is better)
Translates to: HRDVWTGIVCDNGGIGRPAAMPG*GSAQST
Trigger: TGTGCTTTGAGCACTACCCCATCCAGGCATGGCAGC...GGGCCTTCCAATGCCACCGTTGTCACAGACAATGCCTGTCCAAACGTCCCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TTATGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACTCCTTGCGGCTCTTCTaGGTGCCGTGGCTCCGGCGC +
Preference number: 4 (lower is better)
Translates to: LWLELGSSSAYNSLNSPNSLRLF*VPWLRR
Trigger: GCGCCGGAGCCACGGCACCCAGAAGAGCCGCAAGGA...GTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp AAATCCTGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGCTGAGCACCAGCCGCTaGATCTGGTCCTTGCGGCTC +
Preference number: 4 (lower is better)
Translates to: KSWTELHGLFLAVWPFLPLSTSR*IWSLRL
Trigger: GAGCCGCAAGGACCAGATCCAGCGGCTGGTGCTCAG...CGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTTCAGTCTGGAAGGCCGGGTaGAGCTTGGTCAACAGCTCG +
Preference number: 4 (lower is better)
Translates to: WTELHGLFLAVWPFLPPSVWKAG*SLVNSS
Trigger: CGAGCTGTTGACCAAGCTCCACCCGGCCTTCCAGAC...TGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GGGGTTCTGCCTGGGCCTCCCTTTGGTAGATTCCAGAAATGTTTGCTGATGCCAGGCGAGTTAGGGGTCTaGAAGGCCGGGTGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: GVLPGPPFGRFQKCLLMPGELGV*KAGWSL
Trigger: CAAGCTCCACCCGGCCTTCCAGACCCCTAACTCGCC...TGGCATCAGCAAACATTTCTGGAATCTACCAAAGGGAGGCCCAGGCAGAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACCCAGAACCCGCCCGACCCTaGCGAGTTAGGGGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: WLELGSSSAYNSLNSPNPEPARP*RVRGLE
Trigger: TTCCAGACCCCTAACTCGCCAGGGTCGGGCGGGTTC...TGGGTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GTTAGCCTCTTGGTTCTGAAGAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGGTGGGCAGGTCTTCTaGAGCAGCAGGCGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: VSLLVLKNSSPRPWKASLGGQVF*SSRRLS
Trigger: GGAGAGCCGCCTGCTGCTCCAGAAGACCTGCCCACC...TAAGGATGCCTTCCATGGCCTGGGACTCGAGTTCTTCAGAACCAAGAGGCTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp CACGAGCCAACCGGGGCTTATTCCCACCCTCGGCGGTCCCAGCGGGCTCAGCAAATGAAGTTGATTTACTaGCCCATGAATGGGTCACAA +
Preference number: 4 (lower is better)
Translates to: HEPTGAYSHPRRSQRAQQMKLIY*PMNGSQ
Trigger: TTGTGACCCATTCATGGGTCAGTAAATCAACTTCAT...TTGCTGAGCCCGCTGGGACCGCCGAGGGTGGGAATAAGCCCCGGTTGGCTCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp TGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACCCAGCTCGTTCCGGGCCTTaGTCTGCAGGTAGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: WLELGSSSAYNSLNSPNPARSGP*SAGSRS
Trigger: ACTTCGGCTACCTGCAGATCAAGGCCCGGAACGAGC...TGGGTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp AGCAGGGGCTGTGCAGTCAAAGCCAAGTGTAGCCCTGGGACCACTGTGAGCACCAGAGGAAGCCCACGCTaGTGTAGATGTTCTCGTACA +
Preference number: 4 (lower is better)
Translates to: SRGCAVKAKCSPGTTVSTRGSPR*CRCSRT
Trigger: TGTACGAGAACATCTACATCAGCGTGGGCTTCCTCT...GGTGCTCACAGTGGTCCCAGGGCTACACTTGGCTTTGACTGCACAGCCCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp TGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACCCACCCTCCACAAGGATCTaGGCAGGGGCTGTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: WLELGSSSAYNSLNSPNPPSTRI*AGAVQS
Trigger: TGACTGCACAGCCCCTGCTCAGATCCTTGTGGAGGG...TGGGTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp TCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCCTCCTGATGGCGCGCTGCCATaGCTGGATGGGGTAGTGCTC +
Preference number: 4 (lower is better)
Translates to: SSWLCGHFCRLQTWSLPPDGALP*LDGVVL
Trigger: GAGCACTACCCCATCCAGGCATGGCAGCGCGCCATC...AGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp AGCAGGGGCTGTGCAGTCAAAGCCAAGTGTAGCCCTGGGACCACTGTGAGCACCCTGTGTGGCCATTTCTaGCGCCTTCAAACTTGGTCA +
Preference number: 4 (lower is better)
Translates to: SRGCAVKAKCSPGTTVSTLCGHF*RLQTWS
Trigger: TGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAG...GGTGCTCACAGTGGTCCCAGGGCTACACTTGGCTTTGACTGCACAGCCCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp AGGGGAAGAGAACCTCCCCAAGTCATCGGACACCCTCCACAAGGATCTGAGCAGCAGTTTGGAAACAGCTaGATGGACCCCCACCTGTGC +
Preference number: 4 (lower is better)
Translates to: RGREPPQVIGHPPQGSEQQFGNS*MDPHLC
Trigger: GCACAGGTGGGGGTCCATCCAGCTGTTTCCAAACTG...CTGCTCAGATCCTTGTGGAGGGTGTCCGATGACTTGGGGAGGTTCTCTTCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TTATGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACGGGCCACACTCCTCATaGGCTCAGGGACTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: LWLELGSSSAYNSLNSPNGPHSS*AQGLGL
Trigger: CAGGCCCAGTCCCTGAGCCCATGAGGAGTGTGGCCC...GTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp CTGTGTGGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCCTCCTCTAGGAAGGACCGGGGCCAGCGTCTaGTGGATGGTATGGTCGATG +
Preference number: 4 (lower is better)
Translates to: LCGHFCRLQTWSLPPLGRTGASV*WMVWSM
Trigger: CATCGACCATACCATCCACCAGACGCTGGCCCCGGT...CCTTCCTAGAGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTTCATTCAGGGTCCGGAACTaGTGGAAGCGGAAGGGATGG +
Preference number: 4 (lower is better)
Translates to: WTELHGLFLAVWPFLPPSFRVRN*WKRKGW
Trigger: CCATCCCTTCCGCTTCCACCAGTTCCGGACCCTGAA...TGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp CTGTGTGGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCCTCCTCTAGGAAGGACCAGCCGCTGGATCTaGTCCTTGCGGCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LCGHFCRLQTWSLPPLGRTSRWI*SLRLFW
Trigger: CCAGAAGAGCCGCAAGGACCAGATCCAGCGGCTGGT...CCTTCCTAGAGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGTTCTCCCACCGGGACGTTTaGACAGGCATTGTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: ELESQAMEGILSQSWSQFSHRDV*TGIVCD
Trigger: GTCACAGACAATGCCTGTCCAAACGTCCCGGTGGGA...GAACTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGAGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GAAGAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGTCCCACCGGGACGTTTaGACAGGCATTGTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: EELESQAMEGILSQSWSQSHRDV*TGIVCD
Trigger: GTCACAGACAATGCCTGTCCAAACGTCCCGGTGGGA...CTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGAGTTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GACGTTTGGACAGGCATTGTCTGTGACAACGGTGGCATTGGAAGGCCCTGGCAGTCCCACCGGGACGTTTaGACAGGCATTGTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: DVWTGIVCDNGGIGRPWQSHRDV*TGIVCD
Trigger: GTCACAGACAATGCCTGTCCAAACGTCCCGGTGGGA...CTGCCAGGGCCTTCCAATGCCACCGTTGTCACAGACAATGCCTGTCCAAACGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACCCACTTCCCACCCTGTTGTaGGCGGGCTGCAGTGCTGAT +
Preference number: 4 (lower is better)
Translates to: WLELGSSSAYNSLNSPNPLPTLL*AGCSAD
Trigger: ATCAGCACTGCAGCCCGCCCACAACAGGGTGGGAAG...TGGGTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp CACCGGGACGTTTGGACAGGCATTGTCTGTGACAACGGTGGCATTGGAAGGCCCTCGAGTCCCAGGCCATaGAAGGCATCCTTAGTCAGA +
Preference number: 4 (lower is better)
Translates to: HRDVWTGIVCDNGGIGRPSSPRP*KASLVR
Trigger: TCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGA...GGGCCTTCCAATGCCACCGTTGTCACAGACAATGCCTGTCCAAACGTCCCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GAAGAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGTCTGCTTCTAGCCCCTaGTCCCTTCTTGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: EELESQAMEGILSQSWSQSASSP*SLLGGS
Trigger: GCTTCCTCCAAGAAGGGACCAGGGGCTAGAAGCAGA...CTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGAGTTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GACGTTTGGACAGGCATTGTCTGTGACAACGGTGGCATTGGAAGGCCCTGGCAGTCTGCTTCTAGCCCCTaGTCCCTTCTTGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: DVWTGIVCDNGGIGRPWQSASSP*SLLGGS
Trigger: GCTTCCTCCAAGAAGGGACCAGGGGCTAGAAGCAGA...CTGCCAGGGCCTTCCAATGCCACCGTTGTCACAGACAATGCCTGTCCAAACGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp CACCGGGACGTTTGGACAGGCATTGTCTGTGACAACGGTGGCATTGGAAGGCCCTGCATGGGCTCTTCTTaGCTGTGTGGCCATTTCTGC +
Preference number: 4 (lower is better)
Translates to: HRDVWTGIVCDNGGIGRPCMGSS*LCGHFC
Trigger: GCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCA...GGGCCTTCCAATGCCACCGTTGTCACAGACAATGCCTGTCCAAACGTCCCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR CAA 72 bp CCCTGGTCCCTTCTTGGAGGAAGCCCAGTTAGCCTCTaGGTTCTGAAGAACTCGAGTCCCAGGCCATGGAAG +
Preference number: 4 (lower is better)
Translates to: PWSLLGGSPVSL*VLKNSSPRPWK
Trigger: CTTCCATGGCCTGGGACTCGAGTTCTTCAGAACCAAGAGGCTAACTGGGCTTCCTCCAAGAAGGGACCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp TCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCCTCCTCCCCATCTTTGGGCCTaGAGGGGCCACACTCCTCAT +
Preference number: 4 (lower is better)
Translates to: SSWLCGHFCRLQTWSLPPPHLWA*RGHTPH
Trigger: ATGAGGAGTGTGGCCCCTTCAGGCCCAAAGATGGGG...AGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp AGGGGAAGAGAACCTCCCCAAGTCATCGGACACCCTCCACAAGGATCTGAGCAGAGGAGTTGTCTGCAGTaGTGTTCCCCATCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: RGREPPQVIGHPPQGSEQRSCLQ*CSPSLG
Trigger: GCCCAAAGATGGGGAACATCACTGCAGACAACTCCT...CTGCTCAGATCCTTGTGGAGGGTGTCCGATGACTTGGGGAGGTTCTCTTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp TCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCCTCCTGGAAGCGGTAGTAGTTaGTGGCGCGCTGCCATGCCT +
Preference number: 4 (lower is better)
Translates to: SSWLCGHFCRLQTWSLPPGSGSS*WRAAMP
Trigger: AGGCATGGCAGCGCGCCATCAACTACTACCGCTTCC...AGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp GTTAGCCTCTTGGTTCTGAAGAACTCGAGTCCCAGGCCATGGAAGGCATCCTTACCCTCCACAAGGATCTaGGCAGGGGCTGTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: VSLLVLKNSSPRPWKASLPSTRI*AGAVQS
Trigger: TGACTGCACAGCCCCTGCTCAGATCCTTGTGGAGGG...TAAGGATGCCTTCCATGGCCTGGGACTCGAGTTCTTCAGAACCAAGAGGCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp TTATGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACACACGCAGCCCTGAGTaGGGGTCCATGCCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LWLELGSSSAYNSLNSPNTRSPE*GSMPCL
Trigger: AAGGCAGGGCATGGACCCTCACTCAGGGCTGCGTGT...GTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531499.2
CDS-3UTR GCA 90 bp AGCAGGGGCTGTGCAGTCAAAGCCAAGTGTAGCCCTGGGACCACTGTGAGCACCCATCGAGGAGTTGTCTaGAGTGATGTTCCCCATCTT +
Preference number: 4 (lower is better)
Translates to: SRGCAVKAKCSPGTTVSTHRGVV*SDVPHL
Trigger: AAGATGGGGAACATCACTGCAGACAACTCCTCGATG...GGTGCTCACAGTGGTCCCAGGGCTACACTTGGCTTTGACTGCACAGCCCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp CTGTGTGGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCCTCCTCTAGGAAGGGACCAGTTGTCGTGCTaGAGCACGTACTGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LCGHFCRLQTWSLPPLGRDQLSC*STYCSQ
Trigger: CTGGCTGCAGTACGTGCTGCAGCACGACAACTGGTC...CCTTCCTAGAGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp GGGGTTCTGCCTGGGCCTCCCTTTGGTAGATTCCAGAAATGTTTGCTGATGCCATCTCGTACAGGAGGATaGCGCACACCTGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: GVLPGPPFGRFQKCLLMPSRTGG*RTPGRT
Trigger: TGTCCTGCCAGGTGTGCGGCATCCTCCTGTACGAGA...TGGCATCAGCAAACATTTCTGGAATCTACCAAAGGGAGGCCCAGGCAGAACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp TGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACCCATCTCGTACAGGAGGATaGCGCACACCTGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: WLELGSSSAYNSLNSPNPSRTGG*RTPGRT
Trigger: TGTCCTGCCAGGTGTGCGGCATCCTCCTGTACGAGA...TGGGTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp GACGTTTGGACAGGCATTGTCTGTGACAACGGTGGCATTGGAAGGCCCTGGCAGGCATCAGGAAGTAGATaGTGGTCAGCAGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: DVWTGIVCDNGGIGRPWQASGSR*WSAAPW
Trigger: CCAAGGAGCTGCTGACCAGCATCTACTTCCTGATGC...CTGCCAGGGCCTTCCAATGCCACCGTTGTCACAGACAATGCCTGTCCAAACGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp AAATCCTGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGAAGCACACGCGGTGCTaGTTCTCGTCCTCGATGACC +
Preference number: 4 (lower is better)
Translates to: KSWTELHGLFLAVWPFLPKHTRC*FSSSMT
Trigger: GGTCATCGAGGACGAGAACCAGCACCGCGTGTGCTT...CGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCCTCCTCTTCCCACCCTGTTGTaGGCGGGCTGCAGTGCTGAT +
Preference number: 4 (lower is better)
Translates to: SSWLCGHFCRLQTWSLPPLPTLL*AGCSAD
Trigger: ATCAGCACTGCAGCCCGCCCACAACAGGGTGGGAAG...AGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GACGTTTGGACAGGCATTGTCTGTGACAACGGTGGCATTGGAAGGCCCTGGCAGCTCTCCCAGTTCTTATaGCTGGAGCTAGGATCCTCC +
Preference number: 4 (lower is better)
Translates to: DVWTGIVCDNGGIGRPWQLSQFL*LELGSS
Trigger: GGAGGATCCTAGCTCCAGCCATAAGAACTGGGAGAG...CTGCCAGGGCCTTCCAATGCCACCGTTGTCACAGACAATGCCTGTCCAAACGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp AGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGTTCACTGACCAGAAGGGACAGGCATTGTCTGTaGCAACGGTGGCATTGGAAG +
Preference number: 4 (lower is better)
Translates to: RPWKASLVRAGPSSLTRRDRHCL*QRWHWK
Trigger: CTTCCAATGCCACCGTTGTCACAGACAATGCCTGTC...CCTTCTGGTCAGTGAACTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp GAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGTTCCTGTGTGGCCATTTCTaGCGCCTTCAAACTTGGTCA +
Preference number: 4 (lower is better)
Translates to: ELESQAMEGILSQSWSQFLCGHF*RLQTWS
Trigger: TGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAG...GAACTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp GAAGAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGAATCCTGGACTGAGTTaGATGGGCTCTTCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: EELESQAMEGILSQSWSQNPGLS*MGSSWL
Trigger: CAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGATT...CTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGAGTTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp AAATCCTGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGGCCCCAGCTAGGCTCTaGCTTCAAACCTCAAACAGC +
Preference number: 4 (lower is better)
Translates to: KSWTELHGLFLAVWPFLPAPARL*LQTSNS
Trigger: GCTGTTTGAGGTTTGAAGGCAGAGCCTAGCTGGGGC...CGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650645.1
CDS-3UTR CCA 90 bp TCCTGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTGGATGGTATGGTCGATaGTACAGCTCATCGAGGAGT +
Preference number: 4 (lower is better)
Translates to: SWTELHGLFLAVWPFLPPGWYGR*YSSSRS
Trigger: ACTCCTCGATGAGCTGTACCATCGACCATACCATCC...AGGCGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp CTGTGTGGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCCTCCTCTAGGAAGGCCAGCGTCTGGTGGATaGTATGGTCGATGGTACAGC +
Preference number: 4 (lower is better)
Translates to: LCGHFCRLQTWSLPPLGRPASGG*YGRWYS
Trigger: GCTGTACCATCGACCATACCATCCACCAGACGCTGG...CCTTCCTAGAGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GTTAGCCTCTTGGTTCTGAAGAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGGGGCCAGCGTCTGGTaGATGGTATGGTCGATGGTA +
Preference number: 4 (lower is better)
Translates to: VSLLVLKNSSPRPWKASLGASVW*MVWSMV
Trigger: TACCATCGACCATACCATCCACCAGACGCTGGCCCC...TAAGGATGCCTTCCATGGCCTGGGACTCGAGTTCTTCAGAACCAAGAGGCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp AAATCCTGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGTCAGGAAGTAGATGCTaGTCAGCAGCTCCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: KSWTELHGLFLAVWPFLPSGSRC*SAAPWP
Trigger: GGGCCAAGGAGCTGCTGACCAGCATCTACTTCCTGA...CGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACCCAGCTGCCATGCCTGGATaGGGTAGTGCTCAAAGCACA +
Preference number: 4 (lower is better)
Translates to: WLELGSSSAYNSLNSPNPAAMPG*GSAQST
Trigger: TGTGCTTTGAGCACTACCCCATCCAGGCATGGCAGC...TGGGTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp CTGTGTGGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCCTCCTCTAGGAAGGGGGCTAGCATTTCTGTaGAGGTGGGCAGGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LCGHFCRLQTWSLPPLGRGLAFL*RWAGLL
Trigger: CAGAAGACCTGCCCACCTCCACAGAAATGCTAGCCC...CCTTCCTAGAGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCCTCCTCAACCTCTTCAAGGCTaGGGGGAAGAGGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: SSWLCGHFCRLQTWSLPPQPLQG*GEEGKG
Trigger: TCCCTTCCCCTCTTCCCCCCAGCCTTGAAGAGGTTG...AGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TTATGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACCTGGGCTGTTGCCTCTaGGCATCCCCGATGAAAGGG +
Preference number: 4 (lower is better)
Translates to: LWLELGSSSAYNSLNSPNLGCCL*ASPMKG
Trigger: CCCTTTCATCGGGGATGCCCAGAGGCAACAGCCCAG...GTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp AGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGTTCACTGACCAGAAGGCTCTTCTTGGCTGTGTaGCCATTTCTGCCGCCTTCA +
Preference number: 4 (lower is better)
Translates to: RPWKASLVRAGPSSLTRRLFLAV*PFLPPS
Trigger: TGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGAG...CCTTCTGGTCAGTGAACTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR CAA 72 bp CTGCCTGGGCCTCCCTTTGGTAGATTCCAGAAATGTTaGCTGATGCCAACTTCTGCTTCTAGCCCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LPGPPFGRFQKC*LMPTSASSPWS
Trigger: GGACCAGGGGCTAGAAGCAGAAGTTGGCATCAGCAAACATTTCTGGAATCTACCAAAGGGAGGCCCAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp GGGGTTCTGCCTGGGCCTCCCTTTGGTAGATTCCAGAAATGTTTGCTGATGCCAAGGAGTTGTCTGCAGTaGTGTTCCCCATCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: GVLPGPPFGRFQKCLLMPRSCLQ*CSPSLG
Trigger: GCCCAAAGATGGGGAACATCACTGCAGACAACTCCT...TGGCATCAGCAAACATTTCTGGAATCTACCAAAGGGAGGCCCAGGCAGAACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp TGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACCCAGACAGGCATTGTCTGTaGCAACGGTGGCATTGGAAG +
Preference number: 4 (lower is better)
Translates to: WLELGSSSAYNSLNSPNPDRHCL*QRWHWK
Trigger: CTTCCAATGCCACCGTTGTCACAGACAATGCCTGTC...TGGGTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp GTTAGCCTCTTGGTTCTGAAGAACTCGAGTCCCAGGCCATGGAAGGCATCCTTATCAAAGCACACGCGGTaGTGGTTCTCGTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: VSLLVLKNSSPRPWKASLSKHTR*WFSSSM
Trigger: CATCGAGGACGAGAACCAGCACCGCGTGTGCTTTGA...TAAGGATGCCTTCCATGGCCTGGGACTCGAGTTCTTCAGAACCAAGAGGCTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp CGCAGCCGCGGCAGAGGACACGGCTTATTCCCACGAGCCAACCGGGGCTTATTCTTACTTTGCTTTATTTaGAGACTGAAGTGGGCTACA +
Preference number: 4 (lower is better)
Translates to: RSRGRGHGLFPRANRGLFLLCFI*RLKWAT
Trigger: TGTAGCCCACTTCAGTCTGCAAATAAAGCAAAGTAA...GAATAAGCCCCGGTTGGCTCGTGGGAATAAGCCGTGTCCTCTGCCGCGGCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp CTGTGTGGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCCTCCTCTAGGAAGGCTCTCCCAGTTCTTATaGCTGGAGCTAGGATCCTCC +
Preference number: 4 (lower is better)
Translates to: LCGHFCRLQTWSLPPLGRLSQFL*LELGSS
Trigger: GGAGGATCCTAGCTCCAGCCATAAGAACTGGGAGAG...CCTTCCTAGAGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCCTCCTGGGCTAGCATTTCTGTaGAGGTGGGCAGGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: SSWLCGHFCRLQTWSLPPGLAFL*RWAGLL
Trigger: CAGAAGACCTGCCCACCTCCACAGAAATGCTAGCCC...AGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp AGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGTTCACTGACCAGAAGGATCCTTAGTCAGAGCTaGTCCCAGTTCACTGACCAG +
Preference number: 4 (lower is better)
Translates to: RPWKASLVRAGPSSLTRRILSQS*SQFTDQ
Trigger: CTGGTCAGTGAACTGGGACCAGCTCTGACTAAGGAT...CCTTCTGGTCAGTGAACTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TTATGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACCAACCTCTTCAAGGCTaGGGGGAAGAGGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: LWLELGSSSAYNSLNSPNQPLQG*GEEGKG
Trigger: TCCCTTCCCCTCTTCCCCCCAGCCTTGAAGAGGTTG...GTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACCCATGCATGGGCTCTTCTTaGCTGTGTGGCCATTTCTGC +
Preference number: 4 (lower is better)
Translates to: WLELGSSSAYNSLNSPNPCMGSS*LCGHFC
Trigger: GCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCA...TGGGTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp TCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCCTCCTAGGAGTTGTCTGCAGTaGTGTTCCCCATCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: SSWLCGHFCRLQTWSLPPRSCLQ*CSPSLG
Trigger: GCCCAAAGATGGGGAACATCACTGCAGACAACTCCT...AGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp GGGGTTCTGCCTGGGCCTCCCTTTGGTAGATTCCAGAAATGTTTGCTGATGCCAAGAGGAAGCCCACGCTaGTGTAGATGTTCTCGTACA +
Preference number: 4 (lower is better)
Translates to: GVLPGPPFGRFQKCLLMPRGSPR*CRCSRT
Trigger: TGTACGAGAACATCTACATCAGCGTGGGCTTCCTCT...TGGCATCAGCAAACATTTCTGGAATCTACCAAAGGGAGGCCCAGGCAGAACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp TGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACCCAACTGACCAGAAGGTCTaGAGGGCTAGCATTTCTGTG +
Preference number: 4 (lower is better)
Translates to: WLELGSSSAYNSLNSPNPTDQKV*RASISV
Trigger: CACAGAAATGCTAGCCCTTCAGACCTTCTGGTCAGT...TGGGTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp GGGGTTCTGCCTGGGCCTCCCTTTGGTAGATTCCAGAAATGTTTGCTGATGCCATGGAATGAGGAGGCATaGAGGCTTCCACCAATGTCA +
Preference number: 4 (lower is better)
Translates to: GVLPGPPFGRFQKCLLMPWNEEA*RLPPMS
Trigger: TGACATTGGTGGAAGCCTTCATGCCTCCTCATTCCA...TGGCATCAGCAAACATTTCTGGAATCTACCAAAGGGAGGCCCAGGCAGAACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp TCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCCTCCTATGGACCCCCACCTGTaGTTTCCAGCTTCTCCTAGA +
Preference number: 4 (lower is better)
Translates to: SSWLCGHFCRLQTWSLPPMDPHL*FPASPR
Trigger: TCTAGGAGAAGCTGGAAAGCACAGGTGGGGGTCCAT...AGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp TGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTTCACATCGAGGAGTTGTCTaGAGTGATGTTCCCCATCTT +
Preference number: 4 (lower is better)
Translates to: WTELHGLFLAVWPFLPPSHRGVV*SDVPHL
Trigger: AAGATGGGGAACATCACTGCAGACAACTCCTCGATG...TGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp GTTAGCCTCTTGGTTCTGAAGAACTCGAGTCCCAGGCCATGGAAGGCATCCTTATCCTCACACTCCCCATaGACAAACTCTGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: VSLLVLKNSSPRPWKASLSSHSP*TNSAGS
Trigger: GCTTCCTGCAGAGTTTGTGCATGGGGAGTGTGAGGA...TAAGGATGCCTTCCATGGCCTGGGACTCGAGTTCTTCAGAACCAAGAGGCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCCTCCTTCACAACCCGCAGTTTaGAAACAGCTGGATGGACCC +
Preference number: 4 (lower is better)
Translates to: SSWLCGHFCRLQTWSLPPSQPAV*KQLDGP
Trigger: GGGTCCATCCAGCTGTTTCCAAACTGCGGGTTGTGA...AGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGTTCCCTGTTTATAGAAGGTaGTTCAAGCTCTACCAAGGG +
Preference number: 4 (lower is better)
Translates to: ELESQAMEGILSQSWSQFPVYRR*FKLYQG
Trigger: CCCTTGGTAGAGCTTGAACCACCTTCTATAAACAGG...GAACTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TCCTGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTCCTGTTTATAGAAGGTaGTTCAAGCTCTACCAAGGG +
Preference number: 4 (lower is better)
Translates to: SWTELHGLFLAVWPFLPPPVYRR*FKLYQG
Trigger: CCCTTGGTAGAGCTTGAACCACCTTCTATAAACAGG...AGGCGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GGGGTTCTGCCTGGGCCTCCCTTTGGTAGATTCCAGAAATGTTTGCTGATGCCAGTCTGGTGGATGGTATaGTCGATGGTACAGCTCATC +
Preference number: 4 (lower is better)
Translates to: GVLPGPPFGRFQKCLLMPVWWMV*SMVQLI
Trigger: GATGAGCTGTACCATCGACCATACCATCCACCAGAC...TGGCATCAGCAAACATTTCTGGAATCTACCAAAGGGAGGCCCAGGCAGAACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TTATGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACCCAGCGTCTGGTGGATaGTATGGTCGATGGTACAGC +
Preference number: 4 (lower is better)
Translates to: LWLELGSSSAYNSLNSPNPASGG*YGRWYS
Trigger: GCTGTACCATCGACCATACCATCCACCAGACGCTGG...GTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCCTCCTCTCTCCCAGTTCTTATaGCTGGAGCTAGGATCCTCC +
Preference number: 4 (lower is better)
Translates to: SSWLCGHFCRLQTWSLPPLSQFL*LELGSS
Trigger: GGAGGATCCTAGCTCCAGCCATAAGAACTGGGAGAG...AGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCCTCCTCTCTTCTTGGCTGTGTaGCCATTTCTGCCGCCTTCA +
Preference number: 4 (lower is better)
Translates to: SSWLCGHFCRLQTWSLPPLFLAV*PFLPPS
Trigger: TGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGAG...AGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp AAATCCTGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGGACCCAGTAAAATCCTaGACTGAGTTGCATGGGCTC +
Preference number: 4 (lower is better)
Translates to: KSWTELHGLFLAVWPFLPDPVKS*TELHGL
Trigger: GAGCCCATGCAACTCAGTCCAGGATTTTACTGGGTC...CGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp TTATGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACAGAAGTGGTAGGCGTTaGAAACGCCCTTGGCGAAGT +
Preference number: 4 (lower is better)
Translates to: LWLELGSSSAYNSLNSPNRSGRR*KRPWRS
Trigger: ACTTCGCCAAGGGCGTTTTCAACGCCTACCACTTCT...GTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp TCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCCTCCTACTGACCAGAAGGTCTaGAGGGCTAGCATTTCTGTG +
Preference number: 4 (lower is better)
Translates to: SSWLCGHFCRLQTWSLPPTDQKV*RASISV
Trigger: CACAGAAATGCTAGCCCTTCAGACCTTCTGGTCAGT...AGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp TGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTTCAAGTAAAATCCTGGACTaGGTTGCATGGGCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: WTELHGLFLAVWPFLPPSSKILD*VAWALL
Trigger: AAGAAGAGCCCATGCAACTCAGTCCAGGATTTTACT...TGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp GACGTTTGGACAGGCATTGTCTGTGACAACGGTGGCATTGGAAGGCCCTGGCAGGCTTTATTTGCAGACTaGAGTGGGCTACATAAATCC +
Preference number: 4 (lower is better)
Translates to: DVWTGIVCDNGGIGRPWQALFAD*SGLHKS
Trigger: GGATTTATGTAGCCCACTTCAGTCTGCAAATAAAGC...CTGCCAGGGCCTTCCAATGCCACCGTTGTCACAGACAATGCCTGTCCAAACGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp AAAATACAACTCTTGACAGTAAATGAGACTGCCCTCAGCTCATCCCAGTCTGTAAGGGCTGGGCATCGCTaGTGGTGGGCAAGACCCCTA +
Preference number: 4 (lower is better)
Translates to: KIQLLTVNETALSSSQSVRAGHR*WWARPL
Trigger: TAGGGGTCTTGCCCACCACCAGCGATGCCCAGCCCT...TACAGACTGGGATGAGCTGAGGGCAGTCTCATTTACTGTCAAGAGTTGTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GTTAGCCTCTTGGTTCTGAAGAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGTCTGGTGGATGGTATaGTCGATGGTACAGCTCATC +
Preference number: 4 (lower is better)
Translates to: VSLLVLKNSSPRPWKASLVWWMV*SMVQLI
Trigger: GATGAGCTGTACCATCGACCATACCATCCACCAGAC...TAAGGATGCCTTCCATGGCCTGGGACTCGAGTTCTTCAGAACCAAGAGGCTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCCTCCTGTCTGGTGGATGGTATaGTCGATGGTACAGCTCATC +
Preference number: 4 (lower is better)
Translates to: SSWLCGHFCRLQTWSLPPVWWMV*SMVQLI
Trigger: GATGAGCTGTACCATCGACCATACCATCCACCAGAC...AGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp AAAATACAACTCTTGACAGTAAATGAGACTGCCCTCAGCTCATCCCAGTCTGTAAGAGGGACAGGCAGTTaGCCGGGAAGCCCACCACCA +
Preference number: 4 (lower is better)
Translates to: KIQLLTVNETALSSSQSVRGTGS*PGSPPP
Trigger: TGGTGGTGGGCTTCCCGGCCAACTGCCTGTCCCTCT...TACAGACTGGGATGAGCTGAGGGCAGTCTCATTTACTGTCAAGAGTTGTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GTTACTTTGCTTTATTTGCAGACTGAAGTGGGCTACATAAATCCATTACAGAGTGGCTCAGGCCTCACGTaGAGCCACCCGCGGAGGACC +
Preference number: 4 (lower is better)
Translates to: VTLLYLQTEVGYINPLQSGSGLT*SHPRRT
Trigger: GGTCCTCCGCGGGTGGCTCCACGTGAGGCCTGAGCC...ACTCTGTAATGGATTTATGTAGCCCACTTCAGTCTGCAAATAAAGCAAAGTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TTATGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACTCGAGTCCCAGGCCATaGAAGGCATCCTTAGTCAGA +
Preference number: 4 (lower is better)
Translates to: LWLELGSSSAYNSLNSPNSSPRP*KASLVR
Trigger: TCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGA...GTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TTATGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACTGCATGGGCTCTTCTTaGCTGTGTGGCCATTTCTGC +
Preference number: 4 (lower is better)
Translates to: LWLELGSSSAYNSLNSPNCMGSS*LCGHFC
Trigger: GCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCA...GTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GTTAGCCTCTTGGTTCTGAAGAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGACCCAGTAAAATCCTaGACTGAGTTGCATGGGCTC +
Preference number: 4 (lower is better)
Translates to: VSLLVLKNSSPRPWKASLDPVKS*TELHGL
Trigger: GAGCCCATGCAACTCAGTCCAGGATTTTACTGGGTC...TAAGGATGCCTTCCATGGCCTGGGACTCGAGTTCTTCAGAACCAAGAGGCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
3UTR CAA 72 bp CCAGTAAAATCCTGGACTGAGTTGCATGGGCTCTTCTaGGCTGTGTGGCCATTTCTGCCGCCTTCAAACTTG +
Preference number: 4 (lower is better)
Translates to: PVKSWTELHGLF*AVWPFLPPSNL
Trigger: CAAGTTTGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGATTTTACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp AAAATACAACTCTTGACAGTAAATGAGACTGCCCTCAGCTCATCCCAGTCTGTAGCTGGATCTGGTCCTTaGGGCTCTTCTGGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: KIQLLTVNETALSSSQSVAGSGP*GSSGCR
Trigger: ACGGCACCCAGAAGAGCCGCAAGGACCAGATCCAGC...TACAGACTGGGATGAGCTGAGGGCAGTCTCATTTACTGTCAAGAGTTGTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp TGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACCCAGCTTTATTTGCAGACTaGAGTGGGCTACATAAATCC +
Preference number: 4 (lower is better)
Translates to: WLELGSSSAYNSLNSPNPALFAD*SGLHKS
Trigger: GGATTTATGTAGCCCACTTCAGTCTGCAAATAAAGC...TGGGTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp GGGGTTCTGCCTGGGCCTCCCTTTGGTAGATTCCAGAAATGTTTGCTGATGCCAGCTTTATTTGCAGACTaGAGTGGGCTACATAAATCC +
Preference number: 4 (lower is better)
Translates to: GVLPGPPFGRFQKCLLMPALFAD*SGLHKS
Trigger: GGATTTATGTAGCCCACTTCAGTCTGCAAATAAAGC...TGGCATCAGCAAACATTTCTGGAATCTACCAAAGGGAGGCCCAGGCAGAACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp AGGGGAAGAGAACCTCCCCAAGTCATCGGACACCCTCCACAAGGATCTGAGCAGTTACTTTGCTTTATTTaGAGACTGAAGTGGGCTACA +
Preference number: 4 (lower is better)
Translates to: RGREPPQVIGHPPQGSEQLLCFI*RLKWAT
Trigger: TGTAGCCCACTTCAGTCTGCAAATAAAGCAAAGTAA...CTGCTCAGATCCTTGTGGAGGGTGTCCGATGACTTGGGGAGGTTCTCTTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR GCA 90 bp GACGTTTGGACAGGCATTGTCTGTGACAACGGTGGCATTGGAAGGCCCTGGCAGTTACTTTGCTTTATTTaGAGACTGAAGTGGGCTACA +
Preference number: 4 (lower is better)
Translates to: DVWTGIVCDNGGIGRPWQLLCFI*RLKWAT
Trigger: TGTAGCCCACTTCAGTCTGCAAATAAAGCAAAGTAA...CTGCCAGGGCCTTCCAATGCCACCGTTGTCACAGACAATGCCTGTCCAAACGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp AAAATACAACTCTTGACAGTAAATGAGACTGCCCTCAGCTCATCCCAGTCTGTACAACCTCTTCAAGGCTaGGGGGAAGAGGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: KIQLLTVNETALSSSQSVQPLQG*GEEGKG
Trigger: TCCCTTCCCCTCTTCCCCCCAGCCTTGAAGAGGTTG...TACAGACTGGGATGAGCTGAGGGCAGTCTCATTTACTGTCAAGAGTTGTATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GTTACTTTGCTTTATTTGCAGACTGAAGTGGGCTACATAAATCCATTACAGAGTGGCTCTGCAGGAGCCTaGGCACCCTTGCAGCCACGA +
Preference number: 4 (lower is better)
Translates to: VTLLYLQTEVGYINPLQSGSAGA*APLQPR
Trigger: TCGTGGCTGCAAGGGTGCCCAGGCTCCTGCAGAGCC...ACTCTGTAATGGATTTATGTAGCCCACTTCAGTCTGCAAATAAAGCAAAGTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650645.1
CDS-3UTR GCA 90 bp GTTACTTTGCTTTATTTGCAGACTGAAGTGGGCTACATAAATCCATTACAGAGTAGCGGTCCACGGAGATaGAGCAGAGGAAGCCCACGC +
Preference number: 4 (lower is better)
Translates to: VTLLYLQTEVGYINPLQSSGPRR*SRGSPR
Trigger: GCGTGGGCTTCCTCTGCTGCATCTCCGTGGACCGCT...ACTCTGTAATGGATTTATGTAGCCCACTTCAGTCTGCAAATAAAGCAAAGTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp TTATGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACCCTGTTTATAGAAGGTaGTTCAAGCTCTACCAAGGG +
Preference number: 4 (lower is better)
Translates to: LWLELGSSSAYNSLNSPNPVYRR*FKLYQG
Trigger: CCCTTGGTAGAGCTTGAACCACCTTCTATAAACAGG...GTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GTTACTTTGCTTTATTTGCAGACTGAAGTGGGCTACATAAATCCATTACAGAGTCTGAGCACCAGCCGCTaGATCTGGTCCTTGCGGCTC +
Preference number: 4 (lower is better)
Translates to: VTLLYLQTEVGYINPLQSLSTSR*IWSLRL
Trigger: GAGCCGCAAGGACCAGATCCAGCGGCTGGTGCTCAG...ACTCTGTAATGGATTTATGTAGCCCACTTCAGTCTGCAAATAAAGCAAAGTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GTTACTTTGCTTTATTTGCAGACTGAAGTGGGCTACATAAATCCATTACAGAGTGGCGAGTTAGGGGTCTaGAAGGCCGGGTGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: VTLLYLQTEVGYINPLQSGELGV*KAGWSL
Trigger: CAAGCTCCACCCGGCCTTCCAGACCCCTAACTCGCC...ACTCTGTAATGGATTTATGTAGCCCACTTCAGTCTGCAAATAAAGCAAAGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp AAAATACAACTCTTGACAGTAAATGAGACTGCCCTCAGCTCATCCCAGTCTGTATCTGCTTCTAGCCCCTaGTCCCTTCTTGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: KIQLLTVNETALSSSQSVSASSP*SLLGGS
Trigger: GCTTCCTCCAAGAAGGGACCAGGGGCTAGAAGCAGA...TACAGACTGGGATGAGCTGAGGGCAGTCTCATTTACTGTCAAGAGTTGTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GTTACTTTGCTTTATTTGCAGACTGAAGTGGGCTACATAAATCCATTACAGAGTCTGCTGAAATCAGGATaGAGGGAGTCCTCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: VTLLYLQTEVGYINPLQSLLKSG*RESSEG
Trigger: CCCCTCAGAGGACTCCCTCCATCCTGATTTCAGCAG...ACTCTGTAATGGATTTATGTAGCCCACTTCAGTCTGCAAATAAAGCAAAGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650645.1
CDS-3UTR GCA 90 bp GTTACTTTGCTTTATTTGCAGACTGAAGTGGGCTACATAAATCCATTACAGAGTATGGACCCCCACCTGTaGTTTCCAGCTTCTCCTAGA +
Preference number: 4 (lower is better)
Translates to: VTLLYLQTEVGYINPLQSMDPHL*FPASPR
Trigger: TCTAGGAGAAGCTGGAAAGCACAGGTGGGGGTCCAT...ACTCTGTAATGGATTTATGTAGCCCACTTCAGTCTGCAAATAAAGCAAAGTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp GTTACTTTGCTTTATTTGCAGACTGAAGTGGGCTACATAAATCCATTACAGAGTACTGACCAGAAGGTCTaGAGGGCTAGCATTTCTGTG +
Preference number: 4 (lower is better)
Translates to: VTLLYLQTEVGYINPLQSTDQKV*RASISV
Trigger: CACAGAAATGCTAGCCCTTCAGACCTTCTGGTCAGT...ACTCTGTAATGGATTTATGTAGCCCACTTCAGTCTGCAAATAAAGCAAAGTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GTTACTTTGCTTTATTTGCAGACTGAAGTGGGCTACATAAATCCATTACAGAGTGGATGGTATGGTCGATaGTACAGCTCATCGAGGAGT +
Preference number: 4 (lower is better)
Translates to: VTLLYLQTEVGYINPLQSGWYGR*YSSSRS
Trigger: ACTCCTCGATGAGCTGTACCATCGACCATACCATCC...ACTCTGTAATGGATTTATGTAGCCCACTTCAGTCTGCAAATAAAGCAAAGTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CCA 90 bp GTTACTTTGCTTTATTTGCAGACTGAAGTGGGCTACATAAATCCATTACAGAGTATCCTTAGTCAGAGCTaGTCCCAGTTCACTGACCAG +
Preference number: 4 (lower is better)
Translates to: VTLLYLQTEVGYINPLQSILSQS*SQFTDQ
Trigger: CTGGTCAGTGAACTGGGACCAGCTCTGACTAAGGAT...ACTCTGTAATGGATTTATGTAGCCCACTTCAGTCTGCAAATAAAGCAAAGTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp AAAATACAACTCTTGACAGTAAATGAGACTGCCCTCAGCTCATCCCAGTCTGTAATGAAGTTGATTTACTaGCCCATGAATGGGTCACAA +
Preference number: 4 (lower is better)
Translates to: KIQLLTVNETALSSSQSVMKLIY*PMNGSQ
Trigger: TTGTGACCCATTCATGGGTCAGTAAATCAACTTCAT...TACAGACTGGGATGAGCTGAGGGCAGTCTCATTTACTGTCAAGAGTTGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535815.5
ENST00000650645.1
CDS-3UTR TCA 90 bp GTTACTTTGCTTTATTTGCAGACTGAAGTGGGCTACATAAATCCATTACAGAGTTTCCACCAATGTCACTaGCCCAGTAAAATCCTGGAC +
Preference number: 4 (lower is better)
Translates to: VTLLYLQTEVGYINPLQSFHQCH*PSKILD
Trigger: GTCCAGGATTTTACTGGGTCAGTGACATTGGTGGAA...ACTCTGTAATGGATTTATGTAGCCCACTTCAGTCTGCAAATAAAGCAAAGTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS CCA 90 bp CGCGCCCCTCCTCTTGCCAGCGCGCACGCAGATGGCGGGGTGGCCTaGGGAGGTCTTCGGGTCCCTTCCTGGGAACGCAGGGCCAAGTTG +
Preference number: 5 (lower is better)
Translates to: RAPPLASAHADGGVA*GGLRVPSWERRAKL
Trigger: CAACTTGGCCCTGCGTTCCCAGGAAGGGACCCGAAGACCTCCCCAGGCCACCCCGCCATCTGCGTGCGCGCTGGCAAGAGGAGGGGCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529300.1
ENST00000531499.2
CDS CCA 90 bp GGGAACCCGCCCGACCCTGGCGAGTTAGGGGTCTGGAAGGCCGGGTaGAGCTTGGTCAACAGCTCGGGCTCCTCACCCTGGGCCCCGCTT +
Preference number: 5 (lower is better)
Translates to: GNPPDPGELGVWKAG*SLVNSSGSSPWAPL
Trigger: AAGCGGGGCCCAGGGTGAGGAGCCCGAGCTGTTGACCAAGCTCCACCCGGCCTTCCAGACCCCTAACTCGCCAGGGTCGGGCGGGTTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS CCA 90 bp CAGGCCAGGAAGATGACCACGGTGCTGAGCACCAGCCGCTGGATCTaGTCCTTGCGGCTCTTCTGGGTGCCGTGGCTCCGGCGCACGGCG +
Preference number: 5 (lower is better)
Translates to: QARKMTTVLSTSRWI*SLRLFWVPWLRRTA
Trigger: CGCCGTGCGCCGGAGCCACGGCACCCAGAAGAGCCGCAAGGACCAGATCCAGCGGCTGGTGCTCAGCACCGTGGTCATCTTCCTGGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529102.1
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS CCA 90 bp AACCTGCCCGTGGGGAACCCGCCCGACCCTGGCGAGTTAGGGGTCTaGAAGGCCGGGTGGAGCTTGGTCAACAGCTCGGGCTCCTCACCC +
Preference number: 5 (lower is better)
Translates to: NLPVGNPPDPGELGV*KAGWSLVNSSGSSP
Trigger: GGGTGAGGAGCCCGAGCTGTTGACCAAGCTCCACCCGGCCTTCCAGACCCCTAACTCGCCAGGGTCGGGCGGGTTCCCCACGGGCAGGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS CCA 90 bp GGACCCAGGCTAGGCCAACCTGCCCGTGGGGAACCCGCCCGACCCTaGCGAGTTAGGGGTCTGGAAGGCCGGGTGGAGCTTGGTCAACAG +
Preference number: 5 (lower is better)
Translates to: GPRLGQPARGEPARP*RVRGLEGRVELGQQ
Trigger: CTGTTGACCAAGCTCCACCCGGCCTTCCAGACCCCTAACTCGCCAGGGTCGGGCGGGTTCCCCACGGGCAGGTTGGCCTAGCCTGGGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp TTCCGGAGTTACAGGGGCTTCCCTGCCTCCGCAGCGAGGGAAGCAGGAGGCGGCAAGGCCGGGTGGAGCTaGGTCAACAGCTCGGGCTCC +
Preference number: 5 (lower is better)
Translates to: FRSYRGFPASAAREAGGGKAGWS*VNSSGS
Trigger: GGAGCCCGAGCTGTTGACCAAGCTCCACCCGGCCTT...GCCGCCTCCTGCTTCCCTCGCTGCGGAGGCAGGGAAGCCCCTGTAACTCCGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp CAGCGGGCTCAGCAAGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTGCCGGAGCCTGGGCACCCTaGCAGCCACGATCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: QRAQQARAGFRSYRGFPAGAWAP*QPRSQL
Trigger: GAGCTGGGATCGTGGCTGCAAGGGTGCCCAGGCTCC...GGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCTTGCTGAGCCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650645.1
CDS-3UTR CAA 90 bp CACATCGCAGCCGCGGCAGAGGACACGGCTTATTCCCACGAGCCAACCGGGGCTTCCCTTCCCACCCTGTaGTGGGCGGGCTGCAGTGCT +
Preference number: 5 (lower is better)
Translates to: HIAAAAEDTAYSHEPTGASLPTL*WAGCSA
Trigger: AGCACTGCAGCCCGCCCACAACAGGGTGGGAAGGGA...AGCCCCGGTTGGCTCGTGGGAATAAGCCGTGTCCTCTGCCGCGGCTGCGATGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp CGCAGCCGCGGCAGAGGACACGGCTTATTCCCACGAGCCAACCGGGGCTTATTCCGCTGGATCTGGTCCTaGCGGCTCTTCTGGGTGCCG +
Preference number: 5 (lower is better)
Translates to: RSRGRGHGLFPRANRGLFRWIWS*RLFWVP
Trigger: CGGCACCCAGAAGAGCCGCAAGGACCAGATCCAGCG...GAATAAGCCCCGGTTGGCTCGTGGGAATAAGCCGTGTCCTCTGCCGCGGCTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp CGCAGCCGCGGCAGAGGACACGGCTTATTCCCACGAGCCAACCGGGGCTTATTCGGGTCGGCGACGCAGTaGAAGCTGGTGAGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: RSRGRGHGLFPRANRGLFGSATQ*KLVSRR
Trigger: CCTCCTGCTCACCAGCTTCAACTGCGTCGCCGACCC...GAATAAGCCCCGGTTGGCTCGTGGGAATAAGCCGTGTCCTCTGCCGCGGCTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp CGCAGCCGCGGCAGAGGACACGGCTTATTCCCACGAGCCAACCGGGGCTTATTCCTGGTCAGCAGCTCCTaGGCCCAGATGACCACGCTG +
Preference number: 5 (lower is better)
Translates to: RSRGRGHGLFPRANRGLFLVSSS*AQMTTL
Trigger: CAGCGTGGTCATCTGGGCCAAGGAGCTGCTGACCAG...GAATAAGCCCCGGTTGGCTCGTGGGAATAAGCCGTGTCCTCTGCCGCGGCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS TCA 90 bp CCACCGTCAGGTTGCACAGGTACACGCCCAGCTCGTTCCGGGCCTTaGTCTGCAGGTAGCCGAAGTAGAGGGACAGGCAGTTGGCCGGGA +
Preference number: 5 (lower is better)
Translates to: PPSGCTGTRPARSGP*SAGSRSRGTGSWPG
Trigger: TCCCGGCCAACTGCCTGTCCCTCTACTTCGGCTACCTGCAGATCAAGGCCCGGAACGAGCTGGGCGTGTACCTGTGCAACCTGACGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529102.1
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS CCA 90 bp ACCGCCATCCTGTTTATAGAAGGTGGTTCAAGCTCTACCAAGGGCTaGGCATCGCTGGTGGTGGGCAAGACCCTGCGCGGCGCGGGGCTG +
Preference number: 5 (lower is better)
Translates to: TAILFIEGGSSSTKG*ASLVVGKTLRGAGL
Trigger: CAGCCCCGCGCCGCGCAGGGTCTTGCCCACCACCAGCGATGCCCAGCCCTTGGTAGAGCTTGAACCACCTTCTATAAACAGGATGGCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531499.2
CDS-3UTR CAA 90 bp CTGTGTGGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCCTCCTCTAGGAAGGCCCGCGCCCCTCCTCTaGCCAGCGCGCACGCAGATG +
Preference number: 5 (lower is better)
Translates to: LCGHFCRLQTWSLPPLGRPAPLL*PARTQM
Trigger: CATCTGCGTGCGCGCTGGCAAGAGGAGGGGCGCGGG...CCTTCCTAGAGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531499.2
CDS-3UTR CAA 90 bp GGGCTCAGCAAGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTGCCTCCGCAGCTCATCGAGGAGTaGTCTGCAGTGATGTTCCCC +
Preference number: 5 (lower is better)
Translates to: GLSKREQASGVTGASLPPQLIEE*SAVMFP
Trigger: GGGGAACATCACTGCAGACAACTCCTCGATGAGCTG...CGGAGGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCTTGCTGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp AGCAGGGGCTGTGCAGTCAAAGCCAAGTGTAGCCCTGGGACCACTGTGAGCACCGCGTTGAAAACGCCCTaGGCGAAGTCGCAGCTGGCC +
Preference number: 5 (lower is better)
Translates to: SRGCAVKAKCSPGTTVSTALKTP*AKSQLA
Trigger: GGCCAGCTGCGACTTCGCCAAGGGCGTTTTCAACGC...GGTGCTCACAGTGGTCCCAGGGCTACACTTGGCTTTGACTGCACAGCCCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS GCA 90 bp GAGGAAGCCCACCAGGAAGCGGTAGTAGTTGATGGCGCGCTGCCATaGCTGGATGGGGTAGTGCTCAAAGCACACGCGGTGCTGGTTCTC +
Preference number: 5 (lower is better)
Translates to: EEAHQEAVVVDGALP*LDGVVLKAHAVLVL
Trigger: GAGAACCAGCACCGCGTGTGCTTTGAGCACTACCCCATCCAGGCATGGCAGCGCGCCATCAACTACTACCGCTTCCTGGTGGGCTTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529102.1
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp TCCTGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTTCGGCCACCGTCAGGTaGCACAGGTACACGCCCAGC +
Preference number: 5 (lower is better)
Translates to: SWTELHGLFLAVWPFLPPSATVR*HRYTPS
Trigger: GCTGGGCGTGTACCTGTGCAACCTGACGGTGGCCGA...AGGCGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp TCCTGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTAAGGCCGGGTGGAGCTaGGTCAACAGCTCGGGCTCC +
Preference number: 5 (lower is better)
Translates to: SWTELHGLFLAVWPFLPPKAGWS*VNSSGS
Trigger: GGAGCCCGAGCTGTTGACCAAGCTCCACCCGGCCTT...AGGCGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp GAAGAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGTCCCTTCCCACCCTGTaGTGGGCGGGCTGCAGTGCT +
Preference number: 5 (lower is better)
Translates to: EELESQAMEGILSQSWSQSLPTL*WAGCSA
Trigger: AGCACTGCAGCCCGCCCACAACAGGGTGGGAAGGGA...CTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGAGTTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp GGGCTCAGCAAGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTGCCTCCGTTGCATGGGCTCTTCTaGGCTGTGTGGCCATTTCTG +
Preference number: 5 (lower is better)
Translates to: GLSKREQASGVTGASLPPLHGLF*AVWPFL
Trigger: CAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAA...CGGAGGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCTTGCTGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp TCTTCCCTTCCCACCCTGTTGTGGGCGGGCTGCAGTGCTGATCCCACCGGGACGTTGCATGGGCTCTTCTaGGCTGTGTGGCCATTTCTG +
Preference number: 5 (lower is better)
Translates to: SSLPTLLWAGCSADPTGTLHGLF*AVWPFL
Trigger: CAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAA...CGTCCCGGTGGGATCAGCACTGCAGCCCGCCCACAACAGGGTGGGAAGGGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS TCA 90 bp CAAGCTCTACCAAGGGCTGGGCATCGCTGGTGGTGGGCAAGACCCTaGAGCCAGCCTGAGGTTGGAAGCGTTGCTGCTAGAATCCAGGTC +
Preference number: 5 (lower is better)
Translates to: QALPRAGHRWWWARP*SQPEVGSVAARIQV
Trigger: GACCTGGATTCTAGCAGCAACGCTTCCAACCTCAGGCTGGCTTCAGGGTCTTGCCCACCACCAGCGATGCCCAGCCCTTGGTAGAGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529300.1
CDS TCA 90 bp GCTCATCGAGGAGTTGTCTGCAGTGATGTTCCCCATCTTTGGGCCTaGAGGGGCCACACTCCTCATGGGCTCAGGGACTGGGCCTGTCTC +
Preference number: 5 (lower is better)
Translates to: AHRGVVCSDVPHLWA*RGHTPHGLRDWACL
Trigger: GAGACAGGCCCAGTCCCTGAGCCCATGAGGAGTGTGGCCCCTTCAGGCCCAAAGATGGGGAACATCACTGCAGACAACTCCTCGATGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529102.1
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp CGCAGCCGCGGCAGAGGACACGGCTTATTCCCACGAGCCAACCGGGGCTTATTCACGTTTGGACAGGCATaGTCTGTGACAACGGTGGCA +
Preference number: 5 (lower is better)
Translates to: RSRGRGHGLFPRANRGLFTFGQA*SVTTVA
Trigger: TGCCACCGTTGTCACAGACAATGCCTGTCCAAACGT...GAATAAGCCCCGGTTGGCTCGTGGGAATAAGCCGTGTCCTCTGCCGCGGCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp GGGCTCAGCAAGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTGCCTCCGAGCCCAGTTAGCCTCTaGGTTCTGAAGAACTCGAGT +
Preference number: 5 (lower is better)
Translates to: GLSKREQASGVTGASLPPSPVSL*VLKNSS
Trigger: ACTCGAGTTCTTCAGAACCAAGAGGCTAACTGGGCT...CGGAGGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCTTGCTGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp CAGCGGGCTCAGCAAGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTGCCAGCCCAGTTAGCCTCTaGGTTCTGAAGAACTCGAGT +
Preference number: 5 (lower is better)
Translates to: QRAQQARAGFRSYRGFPASPVSL*VLKNSS
Trigger: ACTCGAGTTCTTCAGAACCAAGAGGCTAACTGGGCT...GGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCTTGCTGAGCCCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp CAGCGGGCTCAGCAAGCGAGAGCAGGCTTCCGGAGTTACAGGGGCTTCCCTGCCTGCCTGGGCCTCCCTTaGGTAGATTCCAGAAATGTT +
Preference number: 5 (lower is better)
Translates to: QRAQQARAGFRSYRGFPACLGLP*VDSRNV
Trigger: AACATTTCTGGAATCTACCAAAGGGAGGCCCAGGCA...GGCAGGGAAGCCCCTGTAACTCCGGAAGCCTGCTCTCGCTTGCTGAGCCCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS CCA 90 bp CAGGGACTGGGCCTGTCTCTCCACCGCCATCCTGTTTATAGAAGGTaGTTCAAGCTCTACCAAGGGCTGGGCATCGCTGGTGGTGGGCAA +
Preference number: 5 (lower is better)
Translates to: QGLGLSLHRHPVYRR*FKLYQGLGIAGGGQ
Trigger: TTGCCCACCACCAGCGATGCCCAGCCCTTGGTAGAGCTTGAACCACCTTCTATAAACAGGATGGCGGTGGAGAGACAGGCCCAGTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529102.1
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp AGCAGGGGCTGTGCAGTCAAAGCCAAGTGTAGCCCTGGGACCACTGTGAGCACCGTCACAACCCGCAGTTaGGAAACAGCTGGATGGACC +
Preference number: 5 (lower is better)
Translates to: SRGCAVKAKCSPGTTVSTVTTRS*ETAGWT
Trigger: GGTCCATCCAGCTGTTTCCAAACTGCGGGTTGTGAC...GGTGCTCACAGTGGTCCCAGGGCTACACTTGGCTTTGACTGCACAGCCCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp AAATCCTGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGTCGGCCACCGTCAGGTaGCACAGGTACACGCCCAGC +
Preference number: 5 (lower is better)
Translates to: KSWTELHGLFLAVWPFLPSATVR*HRYTPS
Trigger: GCTGGGCGTGTACCTGTGCAACCTGACGGTGGCCGA...CGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp TGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACCCACGCTGGATCTGGTCCTaGCGGCTCTTCTGGGTGCCG +
Preference number: 5 (lower is better)
Translates to: WLELGSSSAYNSLNSPNPRWIWS*RLFWVP
Trigger: CGGCACCCAGAAGAGCCGCAAGGACCAGATCCAGCG...TGGGTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp CTGTGTGGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCCTCCTCTAGGAAGGAAGGCCGGGTGGAGCTaGGTCAACAGCTCGGGCTCC +
Preference number: 5 (lower is better)
Translates to: LCGHFCRLQTWSLPPLGRKAGWS*VNSSGS
Trigger: GGAGCCCGAGCTGTTGACCAAGCTCCACCCGGCCTT...CCTTCCTAGAGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS TCA 90 bp TGGGGTAGTGCTCAAAGCACACGCGGTGCTGGTTCTCGTCCTCGATaGCCTCCTCGTGCATCAGGAAGTAGATGCTGGTCAGCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: WGSAQSTRGAGSRPR*PPRASGSRCWSAAP
Trigger: AGGAGCTGCTGACCAGCATCTACTTCCTGATGCACGAGGAGGTCATCGAGGACGAGAACCAGCACCGCGTGTGCTTTGAGCACTACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529102.1
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS CCA 90 bp GGACTCCCAGTCTCTGACTCACCTCTTCCATCCTCTTCAGGGCACTaGCCTAGAATTCCAGTGGTGGTGGTGGAGGGAGTTGCTTCTGCG +
Preference number: 5 (lower is better)
Translates to: GLPVSDSPLPSSSGH*PRIPVVVVEGVASA
Trigger: CGCAGAAGCAACTCCCTCCACCACCACCACTGGAATTCTAGGCCAGTGCCCTGAAGAGGATGGAAGAGGTGAGTCAGAGACTGGGAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529300.1
CDS-3UTR CAA 90 bp GGGGTTCTGCCTGGGCCTCCCTTTGGTAGATTCCAGAAATGTTTGCTGATGCCAGAACGCAGGGCCAAGTaGTGCTCCGATTCCACGCCC +
Preference number: 5 (lower is better)
Translates to: GVLPGPPFGRFQKCLLMPERRAK*CSDSTP
Trigger: GGGCGTGGAATCGGAGCACAACTTGGCCCTGCGTTC...TGGCATCAGCAAACATTTCTGGAATCTACCAAAGGGAGGCCCAGGCAGAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531499.2
CDS-3UTR CAA 90 bp GTTAGCCTCTTGGTTCTGAAGAACTCGAGTCCCAGGCCATGGAAGGCATCCTTATCCCTTCCCACCCTGTaGTGGGCGGGCTGCAGTGCT +
Preference number: 5 (lower is better)
Translates to: VSLLVLKNSSPRPWKASLSLPTL*WAGCSA
Trigger: AGCACTGCAGCCCGCCCACAACAGGGTGGGAAGGGA...TAAGGATGCCTTCCATGGCCTGGGACTCGAGTTCTTCAGAACCAAGAGGCTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp CACGAGCCAACCGGGGCTTATTCCCACCCTCGGCGGTCCCAGCGGGCTCAGCAAAGATTCCAGAAATGTTaGCTGATGCCAACTTCTGCT +
Preference number: 5 (lower is better)
Translates to: HEPTGAYSHPRRSQRAQQRFQKC*LMPTSA
Trigger: AGCAGAAGTTGGCATCAGCAAACATTTCTGGAATCT...TTGCTGAGCCCGCTGGGACCGCCGAGGGTGGGAATAAGCCCCGGTTGGCTCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS CCA 90 bp ACCGCCATCCTGTTTATAGAAGGTGGTTCAAGCTCTACCAAGGGCTaGGCATCGCTGGTGGTGGGCAAGACCCCTACTTCTTGCCACGCA +
Preference number: 5 (lower is better)
Translates to: TAILFIEGGSSSTKG*ASLVVGKTPTSCHA
Trigger: TGCGTGGCAAGAAGTAGGGGTCTTGCCCACCACCAGCGATGCCCAGCCCTTGGTAGAGCTTGAACCACCTTCTATAAACAGGATGGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529102.1
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp TCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTTCAAACTTGGTCACTTCCTCCTCTGGTCAGCAGCTCCTaGGCCCAGATGACCACGCTG +
Preference number: 5 (lower is better)
Translates to: SSWLCGHFCRLQTWSLPPLVSSS*AQMTTL
Trigger: CAGCGTGGTCATCTGGGCCAAGGAGCTGCTGACCAG...AGGAGGAAGTGACCAAGTTTGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp TTATGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACGGGTCGGCGACGCAGTaGAAGCTGGTGAGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: LWLELGSSSAYNSLNSPNGSATQ*KLVSRR
Trigger: CCTCCTGCTCACCAGCTTCAACTGCGTCGCCGACCC...GTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp CACCGGGACGTTTGGACAGGCATTGTCTGTGACAACGGTGGCATTGGAAGGCCCACGTTTGGACAGGCATaGTCTGTGACAACGGTGGCA +
Preference number: 5 (lower is better)
Translates to: HRDVWTGIVCDNGGIGRPTFGQA*SVTTVA
Trigger: TGCCACCGTTGTCACAGACAATGCCTGTCCAAACGT...GGGCCTTCCAATGCCACCGTTGTCACAGACAATGCCTGTCCAAACGTCCCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS TCA 90 bp GGATGGTATGGTCGATGGTACAGCTCATCGAGGAGTTGTCTGCAGTaGTGTTCCCCATCTTTGGGCCTGAAGGGGCCACACTCCTCATGG +
Preference number: 5 (lower is better)
Translates to: GWYGRWYSSSRSCLQ*CSPSLGLKGPHSSW
Trigger: CCATGAGGAGTGTGGCCCCTTCAGGCCCAAAGATGGGGAACATCACTGCAGACAACTCCTCGATGAGCTGTACCATCGACCATACCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529102.1
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp TTATGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACCTGGTCAGCAGCTCCTaGGCCCAGATGACCACGCTG +
Preference number: 5 (lower is better)
Translates to: LWLELGSSSAYNSLNSPNLVSSS*AQMTTL
Trigger: CAGCGTGGTCATCTGGGCCAAGGAGCTGCTGACCAG...GTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp TTATGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACGCGTTGAAAACGCCCTaGGCGAAGTCGCAGCTGGCC +
Preference number: 5 (lower is better)
Translates to: LWLELGSSSAYNSLNSPNALKTP*AKSQLA
Trigger: GGCCAGCTGCGACTTCGCCAAGGGCGTTTTCAACGC...GTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp CACCGGGACGTTTGGACAGGCATTGTCTGTGACAACGGTGGCATTGGAAGGCCCTGCCTGGGCCTCCCTTaGGTAGATTCCAGAAATGTT +
Preference number: 5 (lower is better)
Translates to: HRDVWTGIVCDNGGIGRPCLGLP*VDSRNV
Trigger: AACATTTCTGGAATCTACCAAAGGGAGGCCCAGGCA...GGGCCTTCCAATGCCACCGTTGTCACAGACAATGCCTGTCCAAACGTCCCGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp TGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTTCACTGCCGCCTTCAAACTaGGTCACTTCCTCCTCTAGG +
Preference number: 5 (lower is better)
Translates to: WTELHGLFLAVWPFLPPSLPPSN*VTSSSR
Trigger: CCTAGAGGAGGAAGTGACCAAGTTTGAAGGCGGCAG...TGAAGGCGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp GAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGTTCTTGCATGGGCTCTTCTaGGCTGTGTGGCCATTTCTG +
Preference number: 5 (lower is better)
Translates to: ELESQAMEGILSQSWSQFLHGLF*AVWPFL
Trigger: CAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAA...GAACTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp TTCCGGAGTTACAGGGGCTTCCCTGCCTCCGCAGCGAGGGAAGCAGGAGGCGGCTCAACACATGTAGACTaGGCAAAAAGGACAATACAA +
Preference number: 5 (lower is better)
Translates to: FRSYRGFPASAAREAGGGSTHVD*AKRTIQ
Trigger: TTGTATTGTCCTTTTTGCCAAGTCTACATGTGTTGA...GCCGCCTCCTGCTTCCCTCGCTGCGGAGGCAGGGAAGCCCCTGTAACTCCGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS GCA 90 bp AGAATCCAGGTCTCCTTGCTCCACATCCCTGCCACGTACAGTCTCTaGCTGAGACTCAGCTCTCAACCTCTCAGTTCCCAGAAAACAGGG +
Preference number: 5 (lower is better)
Translates to: RIQVSLLHIPATYSL*LRLSSQPLSSQKTG
Trigger: CCCTGTTTTCTGGGAACTGAGAGGTTGAGAGCTGAGTCTCAGGCAGAGACTGTACGTGGCAGGGATGTGGAGCAAGGAGACCTGGATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529300.1
CDS-3UTR CAA 90 bp GAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGTTCAGCCCAGTTAGCCTCTaGGTTCTGAAGAACTCGAGT +
Preference number: 5 (lower is better)
Translates to: ELESQAMEGILSQSWSQFSPVSL*VLKNSS
Trigger: ACTCGAGTTCTTCAGAACCAAGAGGCTAACTGGGCT...GAACTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp GAAGAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGTGCCTGGGCCTCCCTTaGGTAGATTCCAGAAATGTT +
Preference number: 5 (lower is better)
Translates to: EELESQAMEGILSQSWSQCLGLP*VDSRNV
Trigger: AACATTTCTGGAATCTACCAAAGGGAGGCCCAGGCA...CTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGAGTTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp GGGGTTCTGCCTGGGCCTCCCTTTGGTAGATTCCAGAAATGTTTGCTGATGCCACTGCCGCCTTCAAACTaGGTCACTTCCTCCTCTAGG +
Preference number: 5 (lower is better)
Translates to: GVLPGPPFGRFQKCLLMPLPPSN*VTSSSR
Trigger: CCTAGAGGAGGAAGTGACCAAGTTTGAAGGCGGCAG...TGGCATCAGCAAACATTTCTGGAATCTACCAAAGGGAGGCCCAGGCAGAACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp GTTAGCCTCTTGGTTCTGAAGAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGTCACAACCCGCAGTTaGGAAACAGCTGGATGGACC +
Preference number: 5 (lower is better)
Translates to: VSLLVLKNSSPRPWKASLVTTRS*ETAGWT
Trigger: GGTCCATCCAGCTGTTTCCAAACTGCGGGTTGTGAC...TAAGGATGCCTTCCATGGCCTGGGACTCGAGTTCTTCAGAACCAAGAGGCTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp AAAATACAACTCTTGACAGTAAATGAGACTGCCCTCAGCTCATCCCAGTCTGTATCGGCCACCGTCAGGTaGCACAGGTACACGCCCAGC +
Preference number: 5 (lower is better)
Translates to: KIQLLTVNETALSSSQSVSATVR*HRYTPS
Trigger: GCTGGGCGTGTACCTGTGCAACCTGACGGTGGCCGA...TACAGACTGGGATGAGCTGAGGGCAGTCTCATTTACTGTCAAGAGTTGTATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp GAAGAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGAGATTCCAGAAATGTTaGCTGATGCCAACTTCTGCT +
Preference number: 5 (lower is better)
Translates to: EELESQAMEGILSQSWSQRFQKC*LMPTSA
Trigger: AGCAGAAGTTGGCATCAGCAAACATTTCTGGAATCT...CTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGAGTTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp GAAGAACTCGAGTCCCAGGCCATGGAAGGCATCCTTAGTCAGAGCTGGTCCCAGGTTACTTTGCTTTATTaGCAGACTGAAGTGGGCTAC +
Preference number: 5 (lower is better)
Translates to: EELESQAMEGILSQSWSQVTLLY*QTEVGY
Trigger: GTAGCCCACTTCAGTCTGCAAATAAAGCAAAGTAAC...CTGGGACCAGCTCTGACTAAGGATGCCTTCCATGGCCTGGGACTCGAGTTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp TCCTGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGCCTGTTACTTTGCTTTATTaGCAGACTGAAGTGGGCTAC +
Preference number: 5 (lower is better)
Translates to: SWTELHGLFLAVWPFLPPVTLLY*QTEVGY
Trigger: GTAGCCCACTTCAGTCTGCAAATAAAGCAAAGTAAC...AGGCGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp GTTACTTTGCTTTATTTGCAGACTGAAGTGGGCTACATAAATCCATTACAGAGTGGGTCGGCGACGCAGTaGAAGCTGGTGAGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: VTLLYLQTEVGYINPLQSGSATQ*KLVSRR
Trigger: CCTCCTGCTCACCAGCTTCAACTGCGTCGCCGACCC...ACTCTGTAATGGATTTATGTAGCCCACTTCAGTCTGCAAATAAAGCAAAGTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp GACGTTTGGACAGGCATTGTCTGTGACAACGGTGGCATTGGAAGGCCCTGGCAGTCAACACATGTAGACTaGGCAAAAAGGACAATACAA +
Preference number: 5 (lower is better)
Translates to: DVWTGIVCDNGGIGRPWQSTHVD*AKRTIQ
Trigger: TTGTATTGTCCTTTTTGCCAAGTCTACATGTGTTGA...CTGCCAGGGCCTTCCAATGCCACCGTTGTCACAGACAATGCCTGTCCAAACGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp GTTACTTTGCTTTATTTGCAGACTGAAGTGGGCTACATAAATCCATTACAGAGTGCGTTGAAAACGCCCTaGGCGAAGTCGCAGCTGGCC +
Preference number: 5 (lower is better)
Translates to: VTLLYLQTEVGYINPLQSALKTP*AKSQLA
Trigger: GGCCAGCTGCGACTTCGCCAAGGGCGTTTTCAACGC...ACTCTGTAATGGATTTATGTAGCCCACTTCAGTCTGCAAATAAAGCAAAGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp TTATGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACAGATTCCAGAAATGTTaGCTGATGCCAACTTCTGCT +
Preference number: 5 (lower is better)
Translates to: LWLELGSSSAYNSLNSPNRFQKC*LMPTSA
Trigger: AGCAGAAGTTGGCATCAGCAAACATTTCTGGAATCT...GTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp AAATCCTGGACTGAGTTGCATGGGCTCTTCTTGGCTGTGTGGCCATTTCTGCCGTCAACACATGTAGACTaGGCAAAAAGGACAATACAA +
Preference number: 5 (lower is better)
Translates to: KSWTELHGLFLAVWPFLPSTHVD*AKRTIQ
Trigger: TTGTATTGTCCTTTTTGCCAAGTCTACATGTGTTGA...CGGCAGAAATGGCCACACAGCCAAGAAGAGCCCATGCAACTCAGTCCAGGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS-3UTR CAA 90 bp TTATGGCTGGAGCTAGGATCCTCCTCTGCCTATAACTCCCTCAATTCTCCCAACGTTACTTTGCTTTATTaGCAGACTGAAGTGGGCTAC +
Preference number: 5 (lower is better)
Translates to: LWLELGSSSAYNSLNSPNVTLLY*QTEVGY
Trigger: GTAGCCCACTTCAGTCTGCAAATAAAGCAAAGTAAC...GTTGGGAGAATTGAGGGAGTTATAGGCAGAGGAGGATCCTAGCTCCAGCCATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS GCA 72 bp TCTGGGTGCCGTGGCTCCGGCGCACGGCGCGCAGGATaGCCTGGTAGGACGCCAGCAGCAGGCAGATGGGGA +
Preference number: 6 (lower is better)
Translates to: SGCRGSGARRAG*PGRTPAAGRWG
Trigger: TCCCCATCTGCCTGCTGCTGGCGTCCTACCAGGGCATCCTGCGCGCCGTGCGCCGGAGCCACGGCACCCAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529102.1
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS CCA 72 bp CCTCTTGCCAGCGCGCACGCAGATGGCGGGGTGGCCTaGGGAGGTCTTCGGGTCCCTTCCTGGGAACGCAGG +
Preference number: 6 (lower is better)
Translates to: PLASAHADGGVA*GGLRVPSWERR
Trigger: CCTGCGTTCCCAGGAAGGGACCCGAAGACCTCCCCAGGCCACCCCGCCATCTGCGTGCGCGCTGGCAAGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529300.1
ENST00000531499.2
CDS CCA 72 bp AGCACCAGCCGCTGGATCTGGTCCTTGCGGCTCTTCTaGGTGCCGTGGCTCCGGCGCACGGCGCGCAGGATG +
Preference number: 6 (lower is better)
Translates to: STSRWIWSLRLF*VPWLRRTARRM
Trigger: CATCCTGCGCGCCGTGCGCCGGAGCCACGGCACCCAGAAGAGCCGCAAGGACCAGATCCAGCGGCTGGTGCT
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529102.1
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS CAA 90 bp AGGAAGATGACCACGGTGCTGAGCACCAGCCGCTGGATCTGGTCCTaGCGGCTCTTCTGGGTGCCGTGGCTCCGGCGCACGGCGCGCAGG +
Preference number: 6 (lower is better)
Translates to: RKMTTVLSTSRWIWS*RLFWVPWLRRTARR
Trigger: CCTGCGCGCCGTGCGCCGGAGCCACGGCACCCAGAAGAGCCGCAAGGACCAGATCCAGCGGCTGGTGCTCAGCACCGTGGTCATCTTCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529102.1
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS CCA 72 bp GTGGGGAACCCGCCCGACCCTGGCGAGTTAGGGGTCTaGAAGGCCGGGTGGAGCTTGGTCAACAGCTCGGGC +
Preference number: 6 (lower is better)
Translates to: VGNPPDPGELGV*KAGWSLVNSSG
Trigger: GCCCGAGCTGTTGACCAAGCTCCACCCGGCCTTCCAGACCCCTAACTCGCCAGGGTCGGGCGGGTTCCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS CCA 72 bp CTAGGCCAACCTGCCCGTGGGGAACCCGCCCGACCCTaGCGAGTTAGGGGTCTGGAAGGCCGGGTGGAGCTT +
Preference number: 6 (lower is better)
Translates to: LGQPARGEPARP*RVRGLEGRVEL
Trigger: AAGCTCCACCCGGCCTTCCAGACCCCTAACTCGCCAGGGTCGGGCGGGTTCCCCACGGGCAGGTTGGCCTAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS CCA 72 bp GTGGTTCAAGCTCTACCAAGGGCTGGGCATCGCTGGTaGTGGGCAAGACCCTGCGCGGCGCGGGGCTGTGGC +
Preference number: 6 (lower is better)
Translates to: VVQALPRAGHRW*WARPCAARGCG
Trigger: GCCACAGCCCCGCGCCGCGCAGGGTCTTGCCCACCACCAGCGATGCCCAGCCCTTGGTAGAGCTTGAACCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531499.2
CDS CAA 72 bp ACCACGGTGCTGAGCACCAGCCGCTGGATCTGGTCCTaGCGGCTCTTCTGGGTGCCGTGGCTCCGGCGCACG +
Preference number: 6 (lower is better)
Translates to: TTVLSTSRWIWS*RLFWVPWLRRT
Trigger: CGTGCGCCGGAGCCACGGCACCCAGAAGAGCCGCAAGGACCAGATCCAGCGGCTGGTGCTCAGCACCGTGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529102.1
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS CAA 72 bp CCTGGCGAGTTAGGGGTCTGGAAGGCCGGGTGGAGCTaGGTCAACAGCTCGGGCTCCTCACCCTGGGCCCCG +
Preference number: 6 (lower is better)
Translates to: PGELGVWKAGWS*VNSSGSSPWAP
Trigger: CGGGGCCCAGGGTGAGGAGCCCGAGCTGTTGACCAAGCTCCACCCGGCCTTCCAGACCCCTAACTCGCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS CCA 72 bp CCCGACCCTGGCGAGTTAGGGGTCTGGAAGGCCGGGTaGAGCTTGGTCAACAGCTCGGGCTCCTCACCCTGG +
Preference number: 6 (lower is better)
Translates to: PDPGELGVWKAG*SLVNSSGSSPW
Trigger: CCAGGGTGAGGAGCCCGAGCTGTTGACCAAGCTCCACCCGGCCTTCCAGACCCCTAACTCGCCAGGGTCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS CCA 72 bp AAGGTGGTTCAAGCTCTACCAAGGGCTGGGCATCGCTaGTGGTGGGCAAGACCCTGCGCGGCGCGGGGCTGT +
Preference number: 6 (lower is better)
Translates to: KVVQALPRAGHR*WWARPCAARGC
Trigger: ACAGCCCCGCGCCGCGCAGGGTCTTGCCCACCACCAGCGATGCCCAGCCCTTGGTAGAGCTTGAACCACCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531499.2
CDS CCA 72 bp CTTCAGGGCACTGGCCTAGAATTCCAGTGGTGGTGGTaGAGGGAGTTGCTTCTGCGCGGCGCGGGGCTGTGG +
Preference number: 6 (lower is better)
Translates to: LQGTGLEFQWWW*RELLLRGAGLW
Trigger: CCACAGCCCCGCGCCGCGCAGAAGCAACTCCCTCCACCACCACCACTGGAATTCTAGGCCAGTGCCCTGAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529300.1
CDS CCA 72 bp AAGATGACCACGGTGCTGAGCACCAGCCGCTGGATCTaGTCCTTGCGGCTCTTCTGGGTGCCGTGGCTCCGG +
Preference number: 6 (lower is better)
Translates to: KMTTVLSTSRWI*SLRLFWVPWLR
Trigger: CCGGAGCCACGGCACCCAGAAGAGCCGCAAGGACCAGATCCAGCGGCTGGTGCTCAGCACCGTGGTCATCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529102.1
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS CCA 72 bp GCCAGGAAGATGACCACGGTGCTGAGCACCAGCCGCTaGATCTGGTCCTTGCGGCTCTTCTGGGTGCCGTGG +
Preference number: 6 (lower is better)
Translates to: ARKMTTVLSTSR*IWSLRLFWVPW
Trigger: CCACGGCACCCAGAAGAGCCGCAAGGACCAGATCCAGCGGCTGGTGCTCAGCACCGTGGTCATCTTCCTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529102.1
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS CCA 72 bp TCCCCATCTTTGGGCCTGAAGGGGCCACACTCCTCATaGGCTCAGGGACTGGGCCTGTCTCTCCACCGCCAT +
Preference number: 6 (lower is better)
Translates to: SPSLGLKGPHSS*AQGLGLSLHRH
Trigger: ATGGCGGTGGAGAGACAGGCCCAGTCCCTGAGCCCATGAGGAGTGTGGCCCCTTCAGGCCCAAAGATGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529102.1
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS TCA 72 bp CCAAGGGCTGGGCATCGCTGGTGGTGGGCAAGACCCTaGAGCCAGCCTGAGGTTGGAAGCGTTGCTGCTAGA +
Preference number: 6 (lower is better)
Translates to: PRAGHRWWWARP*SQPEVGSVAAR
Trigger: TCTAGCAGCAACGCTTCCAACCTCAGGCTGGCTTCAGGGTCTTGCCCACCACCAGCGATGCCCAGCCCTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529300.1
CDS GCA 72 bp CCGCAGTTTGGAAACAGCTGGATGGACCCCCACCTGTaGTTTCCAGCTTCTCCTAGAGCCTCAGGGCCCCAG +
Preference number: 6 (lower is better)
Translates to: PQFGNSWMDPHL*FPASPRASGPQ
Trigger: CTGGGGCCCTGAGGCTCTAGGAGAAGCTGGAAAGCACAGGTGGGGGTCCATCCAGCTGTTTCCAAACTGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529102.1
ENST00000535815.5
ENST00000650645.1
CDS GCA 72 bp CACCAGGAAGCGGTAGTAGTTGATGGCGCGCTGCCATaGCTGGATGGGGTAGTGCTCAAAGCACACGCGGTG +
Preference number: 6 (lower is better)
Translates to: HQEAVVVDGALP*LDGVVLKAHAV
Trigger: CACCGCGTGTGCTTTGAGCACTACCCCATCCAGGCATGGCAGCGCGCCATCAACTACTACCGCTTCCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529102.1
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS CCA 72 bp TTCCATCCTCTTCAGGGCACTGGCCTAGAATTCCAGTaGTGGTGGTGGAGGGAGTTGCTTCTGCGCGGCGCG +
Preference number: 6 (lower is better)
Translates to: FHPLQGTGLEFQ*WWWRELLLRGA
Trigger: CGCGCCGCGCAGAAGCAACTCCCTCCACCACCACCACTGGAATTCTAGGCCAGTGCCCTGAAGAGGATGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529300.1
CDS CAA 90 bp GCTGGTGGTGGGCAAGACCCTGAAGCCAGCCTGAGGTTGGAAGCGTaGCTGCTAGAATCCAGGTCTCCTTGCTCCACATCCCTGCCACGT +
Preference number: 6 (lower is better)
Translates to: AGGGQDPEASLRLEA*LLESRSPCSTSLPR
Trigger: ACGTGGCAGGGATGTGGAGCAAGGAGACCTGGATTCTAGCAGCAACGCTTCCAACCTCAGGCTGGCTTCAGGGTCTTGCCCACCACCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529300.1
CDS CAA 90 bp CTGGGCATCGCTGGTGGTGGGCAAGACCCTGAAGCCAGCCTGAGGTaGGAAGCGTTGCTGCTAGAATCCAGGTCTCCTTGCTCCACATCC +
Preference number: 6 (lower is better)
Translates to: LGIAGGGQDPEASLR*EALLLESRSPCSTS
Trigger: GGATGTGGAGCAAGGAGACCTGGATTCTAGCAGCAACGCTTCCAACCTCAGGCTGGCTTCAGGGTCTTGCCCACCACCAGCGATGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529300.1
CDS TCA 72 bp GGAGTTGTCTGCAGTGATGTTCCCCATCTTTGGGCCTaGAGGGGCCACACTCCTCATGGGCTCAGGGACTGG +
Preference number: 6 (lower is better)
Translates to: GVVCSDVPHLWA*RGHTPHGLRDW
Trigger: CCAGTCCCTGAGCCCATGAGGAGTGTGGCCCCTTCAGGCCCAAAGATGGGGAACATCACTGCAGACAACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529102.1
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS CCA 72 bp GTGGTTCAAGCTCTACCAAGGGCTGGGCATCGCTGGTaGTGGGCAAGACCCCTACTTCTTGCCACGCACTCT +
Preference number: 6 (lower is better)
Translates to: VVQALPRAGHRW*WARPLLLATHS
Trigger: AGAGTGCGTGGCAAGAAGTAGGGGTCTTGCCCACCACCAGCGATGCCCAGCCCTTGGTAGAGCTTGAACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529102.1
ENST00000535815.5
ENST00000650645.1
CDS CCA 72 bp AAGGTGGTTCAAGCTCTACCAAGGGCTGGGCATCGCTaGTGGTGGGCAAGACCCCTACTTCTTGCCACGCAC +
Preference number: 6 (lower is better)
Translates to: KVVQALPRAGHR*WWARPLLLATH
Trigger: GTGCGTGGCAAGAAGTAGGGGTCTTGCCCACCACCAGCGATGCCCAGCCCTTGGTAGAGCTTGAACCACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529102.1
ENST00000535815.5
ENST00000650645.1
CDS CCA 72 bp CTGTTTATAGAAGGTGGTTCAAGCTCTACCAAGGGCTaGGCATCGCTGGTGGTGGGCAAGACCCTGCGCGGC +
Preference number: 6 (lower is better)
Translates to: LFIEGGSSSTKG*ASLVVGKTLRG
Trigger: GCCGCGCAGGGTCTTGCCCACCACCAGCGATGCCCAGCCCTTGGTAGAGCTTGAACCACCTTCTATAAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531499.2
CDS CAA 72 bp GCTGGTGGTGGGCAAGACCCTGAAGCCAGCCTGAGGTaGGAAGCGTTGCTGCTAGAATCCAGGTCTCCTTGC +
Preference number: 6 (lower is better)
Translates to: AGGGQDPEASLR*EALLLESRSPC
Trigger: GCAAGGAGACCTGGATTCTAGCAGCAACGCTTCCAACCTCAGGCTGGCTTCAGGGTCTTGCCCACCACCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529300.1
CDS GCA 72 bp GAGTCCTCTCTGACTCTGCCTGCCCCAGCTAGGCTCTaGCTTCAAACCTCAAACAGCTGGGCTTCCTGCAGA +
Preference number: 6 (lower is better)
Translates to: ESSLTLPAPARL*LQTSNSWASCR
Trigger: TCTGCAGGAAGCCCAGCTGTTTGAGGTTTGAAGGCAGAGCCTAGCTGGGGCAGGCAGAGTCAGAGAGGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650645.1
CDS CCA 72 bp GTTCAAGCTCTACCAAGGGCTGGGCATCGCTGGTGGTaGGCAAGACCCCTACTTCTTGCCACGCACTCTGAT +
Preference number: 6 (lower is better)
Translates to: VQALPRAGHRWW*ARPLLLATHSD
Trigger: ATCAGAGTGCGTGGCAAGAAGTAGGGGTCTTGCCCACCACCAGCGATGCCCAGCCCTTGGTAGAGCTTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529102.1
ENST00000535815.5
ENST00000650645.1
CDS CAA 72 bp GGGCAAGACCCTGAAGCCAGCCTGAGGTTGGAAGCGTaGCTGCTAGAATCCAGGTCTCCTTGCTCCACATCC +
Preference number: 6 (lower is better)
Translates to: GQDPEASLRLEA*LLESRSPCSTS
Trigger: GGATGTGGAGCAAGGAGACCTGGATTCTAGCAGCAACGCTTCCAACCTCAGGCTGGCTTCAGGGTCTTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529300.1
CDS TCA 72 bp GGTCGATGGTACAGCTCATCGAGGAGTTGTCTGCAGTaGTGTTCCCCATCTTTGGGCCTGAAGGGGCCACAC +
Preference number: 6 (lower is better)
Translates to: GRWYSSSRSCLQ*CSPSLGLKGPH
Trigger: GTGTGGCCCCTTCAGGCCCAAAGATGGGGAACATCACTGCAGACAACTCCTCGATGAGCTGTACCATCGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529102.1
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS TCA 72 bp GCTCAAAGCACACGCGGTGCTGGTTCTCGTCCTCGATaGCCTCCTCGTGCATCAGGAAGTAGATGCTGGTCA +
Preference number: 6 (lower is better)
Translates to: AQSTRGAGSRPR*PPRASGSRCWS
Trigger: TGACCAGCATCTACTTCCTGATGCACGAGGAGGTCATCGAGGACGAGAACCAGCACCGCGTGTGCTTTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529102.1
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS GCA 72 bp GTCTCCTTGCTCCACATCCCTGCCACGTACAGTCTCTaGCTGAGACTCAGCTCTCAACCTCTCAGTTCCCAG +
Preference number: 6 (lower is better)
Translates to: VSLLHIPATYSL*LRLSSQPLSSQ
Trigger: CTGGGAACTGAGAGGTTGAGAGCTGAGTCTCAGGCAGAGACTGTACGTGGCAGGGATGTGGAGCAAGGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529300.1
CDS CCA 72 bp GGCCTGTCTCTCCACCGCCATCCTGTTTATAGAAGGTaGTTCAAGCTCTACCAAGGGCTGGGCATCGCTGGT +
Preference number: 6 (lower is better)
Translates to: GLSLHRHPVYRR*FKLYQGLGIAG
Trigger: ACCAGCGATGCCCAGCCCTTGGTAGAGCTTGAACCACCTTCTATAAACAGGATGGCGGTGGAGAGACAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529102.1
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS CAA 90 bp AGCGTCTGGTGGATGGTATGGTCGATGGTACAGCTCATCGAGGAGTaGTCTGCAGTGATGTTCCCCATCTTTGGGCCTGAAGGGGCCACA +
Preference number: 6 (lower is better)
Translates to: SVWWMVWSMVQLIEE*SAVMFPIFGPEGAT
Trigger: TGTGGCCCCTTCAGGCCCAAAGATGGGGAACATCACTGCAGACAACTCCTCGATGAGCTGTACCATCGACCATACCATCCACCAGACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529102.1
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS CCA 72 bp GTCTCTGACTCACCTCTTCCATCCTCTTCAGGGCACTaGCCTAGAATTCCAGTGGTGGTGGTGGAGGGAGTT +
Preference number: 6 (lower is better)
Translates to: VSDSPLPSSSGH*PRIPVVVVEGV
Trigger: AACTCCCTCCACCACCACCACTGGAATTCTAGGCCAGTGCCCTGAAGAGGATGGAAGAGGTGAGTCAGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529300.1
CDS CCA 72 bp CTGTTTATAGAAGGTGGTTCAAGCTCTACCAAGGGCTaGGCATCGCTGGTGGTGGGCAAGACCCCTACTTCT +
Preference number: 6 (lower is better)
Translates to: LFIEGGSSSTKG*ASLVVGKTPTS
Trigger: AGAAGTAGGGGTCTTGCCCACCACCAGCGATGCCCAGCCCTTGGTAGAGCTTGAACCACCTTCTATAAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529102.1
ENST00000535815.5
ENST00000650645.1
CDS CAA 72 bp TGGATGGTATGGTCGATGGTACAGCTCATCGAGGAGTaGTCTGCAGTGATGTTCCCCATCTTTGGGCCTGAA +
Preference number: 6 (lower is better)
Translates to: WMVWSMVQLIEE*SAVMFPIFGPE
Trigger: TTCAGGCCCAAAGATGGGGAACATCACTGCAGACAACTCCTCGATGAGCTGTACCATCGACCATACCATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529102.1
ENST00000531499.2
ENST00000535815.5
ENST00000650645.1
CDS CAA 72 bp CTGGGCATCGCTGGTGGTGGGCAAGACCCCTACTTCTaGCCACGCACTCTGATCATTTCTATTCTATTTCAA +
Preference number: 6 (lower is better)
Translates to: LGIAGGGQDPYF*PRTLIISILFQ
Trigger: TTGAAATAGAATAGAAATGATCAGAGTGCGTGGCAAGAAGTAGGGGTCTTGCCCACCACCAGCGATGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529102.1
ENST00000535815.5
ENST00000650645.1
CDS CCA 72 bp GTCATGAGCTATGAAGTTGATTTACTGACCCATGAATaGGTCACAACCCGCAGTTTGGAAACAGCTGGATGG +
Preference number: 6 (lower is better)
Translates to: VMSYEVDLLTHE*VTTRSLETAGW
Trigger: CCATCCAGCTGTTTCCAAACTGCGGGTTGTGACCCATTCATGGGTCAGTAAATCAACTTCATAGCTCATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529102.1
ENST00000535815.5
ENST00000650645.1