RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPR55 (Homo sapiens)

Ensembl gene IDs: ENSG00000135898

Ensembl transcript IDs: ENST00000392039.2, ENST00000392040.5, ENST00000438398.1, ENST00000444078.5, ENST00000622008.4, ENST00000650999.1

Found 663 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGGCCCTCCTGCCGAGCAGCCGTAGTGGCCTGCAGCATGGACCTGTaGCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTC +
Preference number: 1 (lower is better)
Translates to: RPSCRAAVVACSMDL*PLPQTRVPTEKRPF
Trigger: GAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCACAGGTCCATGCTGCAGGCCACTACGGCTGCTCGGCAGGAGGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR GCA 90 bp GTGGGTCCAAACTCTCGGCCCTCCTGCCGAGCAGCCGTAGTGGCCTaGAGCATGGACCTGTGCCCGCTCCCACAGACACGGGTCCCCACG +
Preference number: 1 (lower is better)
Translates to: VGPNSRPSCRAAVVA*SMDLCPLPQTRVPT
Trigger: CGTGGGGACCCGTGTCTGTGGGAGCGGGCACAGGTCCATGCTGCAGGCCACTACGGCTGCTCGGCAGGAGGGCCGAGAGTTTGGACCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR GCA 90 bp GCCAGCTTGGGTTGCAGCTATGTGGGTCCAAACTCTCGGCCCTCCTaGCGAGCAGCCGTAGTGGCCTGCAGCATGGACCTGTGCCCGCTC +
Preference number: 1 (lower is better)
Translates to: ASLGCSYVGPNSRPS*RAAVVACSMDLCPL
Trigger: GAGCGGGCACAGGTCCATGCTGCAGGCCACTACGGCTGCTCGGCAGGAGGGCCGAGAGTTTGGACCCACATAGCTGCAACCCAAGCTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR CCA 90 bp GCCCCTCCTGTGCTGCTGGGCCCCACTGCTGATTATGGGCCAGCTTaGGTTGCAGCTATGTGGGTCCAAACTCTCGGCCCTCCTGCCGAG +
Preference number: 1 (lower is better)
Translates to: APPVLLGPTADYGPA*VAAMWVQTLGPPAE
Trigger: CTCGGCAGGAGGGCCGAGAGTTTGGACCCACATAGCTGCAACCCAAGCTGGCCCATAATCAGCAGTGGGGCCCAGCAGCACAGGAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR CCA 90 bp CAGGCAGCCTTACCTCTGGGTCTGCAGAGCCTGACTCTGTGGCTGTaGTTCTTAGAGGCCCAGCTCAGGGGGCCTGAGCCTCCGATCCCT +
Preference number: 1 (lower is better)
Translates to: QAALPLGLQSLTLWL*FLEAQLRGPEPPIP
Trigger: AGGGATCGGAGGCTCAGGCCCCCTGAGCTGGGCCTCTAAGAACCACAGCCACAGAGTCAGGCTCTGCAGACCCAGAGGTAAGGCTGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR TCA 90 bp CCTGACTCTGTGGCTGTGGTTCTTAGAGGCCCAGCTCAGGGGGCCTaGGCCTCCGATCCCTCTGGTCTGGTCTGGTCTGGTCTGGTCACT +
Preference number: 1 (lower is better)
Translates to: PDSVAVVLRGPAQGA*ASDPSGLVWSGLVT
Trigger: AGTGACCAGACCAGACCAGACCAGACCAGAGGGATCGGAGGCTCAGGCCCCCTGAGCTGGGCCTCTAAGAACCACAGCCACAGAGTCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR CCA 90 bp GCAACAGCGGGAGCTGCTCCTGAGAAGGCGACTCCTGTCCGTCCATaGCTCTTAGGCCAGCTGGGAAAGCTCTCAGGCAGGAAGCAGCTC +
Preference number: 1 (lower is better)
Translates to: ATAGAAPEKATPVRP*LLGQLGKLSGRKQL
Trigger: GAGCTGCTTCCTGCCTGAGAGCTTTCCCAGCTGGCCTAAGAGCCATGGACGGACAGGAGTCGCCTTCTCAGGAGCAGCTCCCGCTGTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR TCA 90 bp GTGTACAGGGTGCCACTTGAACACAGCAACAGCGGGAGCTGCTCCTaGGAAGGCGACTCCTGTCCGTCCATGGCTCTTAGGCCAGCTGGG +
Preference number: 1 (lower is better)
Translates to: VYRVPLEHSNSGSCS*EGDSCPSMALRPAG
Trigger: CCCAGCTGGCCTAAGAGCCATGGACGGACAGGAGTCGCCTTCTCAGGAGCAGCTCCCGCTGTTGCTGTGTTCAAGTGGCACCCTGTACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR TCA 90 bp ACCCTTCCCTCCATCCACCTAGGAGGAGGTGTACAGGGTGCCACTTaGACACAGCAACAGCGGGAGCTGCTCCTGAGAAGGCGACTCCTG +
Preference number: 1 (lower is better)
Translates to: TLPSIHLGGGVQGAT*TQQQRELLLRRRLL
Trigger: CAGGAGTCGCCTTCTCAGGAGCAGCTCCCGCTGTTGCTGTGTTCAAGTGGCACCCTGTACACCTCCTCCTAGGTGGATGGAGGGAAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR TCA 90 bp CCAAAGCTAACCGTCCGCCCCTCCTGTGCTGCTGGGCCCCACTGCTaGTTATGGGCCAGCTTGGGTTGCAGCTATGTGGGTCCAAACTCT +
Preference number: 1 (lower is better)
Translates to: PKLTVRPSCAAGPHC*LWASLGCSYVGPNS
Trigger: AGAGTTTGGACCCACATAGCTGCAACCCAAGCTGGCCCATAATCAGCAGTGGGGCCCAGCAGCACAGGAGGGGCGGACGGTTAGCTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR GCA 90 bp CTTCCTCACCCTTCCCTCCATCCACCTAGGAGGAGGTGTACAGGGTaGCACTTGAACACAGCAACAGCGGGAGCTGCTCCTGAGAAGGCG +
Preference number: 1 (lower is better)
Translates to: LPHPSLHPPRRRCTG*HLNTATAGAAPEKA
Trigger: CGCCTTCTCAGGAGCAGCTCCCGCTGTTGCTGTGTTCAAGTGGCACCCTGTACACCTCCTCCTAGGTGGATGGAGGGAAGGGTGAGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR CCA 90 bp GGCAGGCTCCCAACTCCTCGTGCAGAGAAAGAAGTGGGAGGAGGGTaGTCACTAAATCCACCACCCGTAGACACTGACCCGAACCAGCCC +
Preference number: 1 (lower is better)
Translates to: GRLPTPRAEKEVGGG*SLNPPPVDTDPNQP
Trigger: GGGCTGGTTCGGGTCAGTGTCTACGGGTGGTGGATTTAGTGACCACCCTCCTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAGCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR GCA 90 bp CACTCTCCGGAGCAGCTGAGTCATTGGGAGGCTTCCGCTGTCACTTaGACTCCTCCTCCAGATCCGTTGAGAAGCCATCCAGGCGTGACT +
Preference number: 1 (lower is better)
Translates to: HSPEQLSHWEASAVT*TPPPDPLRSHPGVT
Trigger: AGTCACGCCTGGATGGCTTCTCAACGGATCTGGAGGAGGAGTGCAAGTGACAGCGGAAGCCTCCCAATGACTCAGCTGCTCCGGAGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR TCA 90 bp CCCGTAGACACTGACCCGAACCAGCCCCAAATGCCCCGTTGCATGTaGAAGTCTGGCTCCCTCAGAGTATCACGGGTGGGTCTCTGTCTA +
Preference number: 1 (lower is better)
Translates to: PVDTDPNQPQMPRCM*KSGSLRVSRVGLCL
Trigger: TAGACAGAGACCCACCCGTGATACTCTGAGGGAGCCAGACTTTCACATGCAACGGGGCATTTGGGGCTGGTTCGGGTCAGTGTCTACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR TCA 90 bp GGAAGCCCATCTGGCCTTAAGCACATTGGTAGACCCAAGTGCACATaGCGGGCATCACTCAACTCCACCAGGCAGGCTCCCAACTCCTCG +
Preference number: 1 (lower is better)
Translates to: GSPSGLKHIGRPKCT*RASLNSTRQAPNSS
Trigger: CGAGGAGTTGGGAGCCTGCCTGGTGGAGTTGAGTGATGCCCGTCATGTGCACTTGGGTCTACCAATGTGCTTAAGGCCAGATGGGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR TCA 90 bp CTTCTCACGGGCACGGAAAGGTGTGGCTGGCTTCCTTCACCTTTCTaGGGCTCACTGGAAACTTGGGGTGATCCATGCTACTTGCCCAGC +
Preference number: 1 (lower is better)
Translates to: LLTGTERCGWLPSPF*GSLETWGDPCYLPS
Trigger: GCTGGGCAAGTAGCATGGATCACCCCAAGTTTCCAGTGAGCCTCAGAAAGGTGAAGGAAGCCAGCCACACCTTTCCGTGCCCGTGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR TCA 90 bp AGAAGTGGGAGGAGGGTGGTCACTAAATCCACCACCCGTAGACACTaGCCCGAACCAGCCCCAAATGCCCCGTTGCATGTGAAAGTCTGG +
Preference number: 1 (lower is better)
Translates to: RSGRRVVTKSTTRRH*PEPAPNAPLHVKVW
Trigger: CCAGACTTTCACATGCAACGGGGCATTTGGGGCTGGTTCGGGTCAGTGTCTACGGGTGGTGGATTTAGTGACCACCCTCCTCCCACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR CCA 90 bp GCACGGAAAGGTGTGGCTGGCTTCCTTCACCTTTCTGAGGCTCACTaGAAACTTGGGGTGATCCATGCTACTTGCCCAGCCCCAACACCA +
Preference number: 1 (lower is better)
Translates to: ARKGVAGFLHLSEAH*KLGVIHATCPAPTP
Trigger: TGGTGTTGGGGCTGGGCAAGTAGCATGGATCACCCCAAGTTTCCAGTGAGCCTCAGAAAGGTGAAGGAAGCCAGCCACACCTTTCCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR CCA 90 bp CACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTaGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTT +
Preference number: 1 (lower is better)
Translates to: HISEDGADHPTTSKP*NAISVTRIQGQGFL
Trigger: AAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR TCA 90 bp AGACAGCACCTCCTCCACCCTCCTATGGTGGAACCAAGGCAGGCCTaGTTCTTTGCCATTGTTTTCAAGGAAGCTAGCTGTAATGAGCAA +
Preference number: 1 (lower is better)
Translates to: RQHLLHPPMVEPRQA*FFAIVFKEASCNEQ
Trigger: TTGCTCATTACAGCTAGCTTCCTTGAAAACAATGGCAAAGAATCAGGCCTGCCTTGGTTCCACCATAGGAGGGTGGAGGAGGTGCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR CCA 90 bp TTACTCCTCATCCCACTCGCTCTGTCATGCAAAACCACCCCACAATaGATCCTTCTCATCATTTCACTCTCCGGAGCAGCTGAGTCATTG +
Preference number: 1 (lower is better)
Translates to: LLLIPLALSCKTTPQ*ILLIISLSGAAESL
Trigger: CAATGACTCAGCTGCTCCGGAGAGTGAAATGATGAGAAGGATCCATTGTGGGGTGGTTTTGCATGACAGAGCGAGTGGGATGAGGAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR CCA 90 bp AACACAGTTCCAGAAGGGACTGGAAAATGCAAGTCTGCTCTGTTCTaGGACACCCAAACTAAAAAGGGACTTCACTCATCCCTACCACCC +
Preference number: 1 (lower is better)
Translates to: NTVPEGTGKCKSALF*DTQTKKGLHSSLPP
Trigger: GGGTGGTAGGGATGAGTGAAGTCCCTTTTTAGTTTGGGTGTCCCAGAACAGAGCAGACTTGCATTTTCCAGTCCCTTCTGGAACTGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR CCA 90 bp CTCTCTCTCTCTTTCTTTCCAGAACCTCCCAGTCGAACAGGAAAATaGGGAGAGTTGGAAACAGCCTTGTTGACATGGTCTCATTCTCTT +
Preference number: 1 (lower is better)
Translates to: LSLSFFPEPPSRTGK*GELETALLTWSHSL
Trigger: AAGAGAATGAGACCATGTCAACAAGGCTGTTTCCAACTCTCCCCATTTTCCTGTTCGACTGGGAGGTTCTGGAAAGAAAGAGAGAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR CCA 90 bp CCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCACAGTGGCAGCTCCTGGGTCCTaGCTCCCCTCCCCGTCCCTC +
Preference number: 2 (lower is better)
Translates to: PAPTDTGPHGEEALLSTVAAPGS*LPSPSL
Trigger: GAGGGACGGGGAGGGGAGCCAGGACCCAGGAGCTGC...CACTGTGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR GCA 90 bp CCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCACAGTGTGGGCAGTGCCACGGGTaGCAGCTGCCCAGCCAGGAT +
Preference number: 2 (lower is better)
Translates to: PLPQTRVPTEKRPFFPQCGQCHG*QLPSQD
Trigger: ATCCTGGCTGGGCAGCTGGCACCCGTGGCACTGCCC...ACACTGTGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR CCA 90 bp AGCCGTAGTGGCCTGCAGCATGGACCTGTGCCCGCTCCCACAGACACGGGTCCCTGTCTCTCTTCACCCTaGGCCAGCACCAACACTCCG +
Preference number: 2 (lower is better)
Translates to: SRSGLQHGPVPAPTDTGPCLSSP*ASTNTP
Trigger: CGGAGTGTTGGTGCTGGCCCAGGGTGAAGAGAGACA...GGGACCCGTGTCTGTGGGAGCGGGCACAGGTCCATGCTGCAGGCCACTACGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR CAA 90 bp CTCCTGTGCTGCTGGGCCCCACTGCTGATTATGGGCCAGCTTGGGTaGCAGCTATGTGGGTCCAAACTCTCGGCCCTCCTGCCGAGCAGC +
Preference number: 2 (lower is better)
Translates to: LLCCWAPLLIMGQLG*QLCGSKLSALLPSS
Trigger: GCTGCTCGGCAGGAGGGCCGAGAGTTTGGACCCACATAGCTGCAACCCAAGCTGGCCCATAATCAGCAGTGGGGCCCAGCAGCACAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR GCA 90 bp CCAAACTCTCGGCCCTCCTGCCGAGCAGCCGTAGTGGCCTGCAGCATGGACCTGCTACCACCCCACCTCTaGCCAAGACACTCTCCCCAA +
Preference number: 2 (lower is better)
Translates to: PNSRPSCRAAVVACSMDLLPPHL*PRHSPQ
Trigger: TTGGGGAGAGTGTCTTGGGCAGAGGTGGGGTGGTAG...CAGGTCCATGCTGCAGGCCACTACGGCTGCTCGGCAGGAGGGCCGAGAGTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR CCA 90 bp AGCCGTAGTGGCCTGCAGCATGGACCTGTGCCCGCTCCCACAGACACGGGTCCCCCCCCTCATGGCTCTTaGATGTCATCAACACCCCAC +
Preference number: 2 (lower is better)
Translates to: SRSGLQHGPVPAPTDTGPPPHGS*MSSTPH
Trigger: GTGGGGTGTTGATGACATCCAAGAGCCATGAGGGGG...GGGACCCGTGTCTGTGGGAGCGGGCACAGGTCCATGCTGCAGGCCACTACGGCT
63% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR CCA 90 bp ACCCACCCTGCACTCCCTGCAGGCTTCAAGCCTAGGGCCACGGCTCAGCTTCCCTGTCTCTCTTCACCCTaGGCCAGCACCAACACTCCG +
Preference number: 2 (lower is better)
Translates to: THPALPAGFKPRATAQLPCLSSP*ASTNTP
Trigger: CGGAGTGTTGGTGCTGGCCCAGGGTGAAGAGAGACA...GGGAAGCTGAGCCGTGGCCCTAGGCTTGAAGCCTGCAGGGAGTGCAGGGTGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR CCA 90 bp CTGTGCTGCTGGGCCCCACTGCTGATTATGGGCCAGCTTGGGTTGCAGCTATGTGGAGGGACGGCTCCATaGGCAGTGCCACGGGTGCCA +
Preference number: 2 (lower is better)
Translates to: LCCWAPLLIMGQLGLQLCGGTAP*AVPRVP
Trigger: TGGCACCCGTGGCACTGCCCATGGAGCCGTCCCTCC...ACATAGCTGCAACCCAAGCTGGCCCATAATCAGCAGTGGGGCCCAGCAGCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR CCA 90 bp AGCATGGACCTGTGCCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCCAGAGCCTGACTCTGTaGCTGTGGTTCTTAGAGGCC +
Preference number: 2 (lower is better)
Translates to: SMDLCPLPQTRVPTEKRPQSLTL*LWFLEA
Trigger: GGCCTCTAAGAACCACAGCCACAGAGTCAGGCTCTG...GGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCACAGGTCCATGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR TCA 90 bp AGCATGGACCTGTGCCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCACTGGAAACTTGGGGTaGTCCATGCTACTTGCCCAG +
Preference number: 2 (lower is better)
Translates to: SMDLCPLPQTRVPTEKRPTGNLG*SMLLAQ
Trigger: CTGGGCAAGTAGCATGGATCACCCCAAGTTTCCAGT...GGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCACAGGTCCATGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR GCA 90 bp CTCCCAACTCCTCGTGCAGAGAAAGAAGTGGGAGGAGGGTGGTCACTAAATCCACGGCTCCATGGGCAGTaGCACGGGTGCCAGCTGCCC +
Preference number: 2 (lower is better)
Translates to: LPTPRAEKEVGGGWSLNPRLHGQ*HGCQLP
Trigger: GGGCAGCTGGCACCCGTGGCACTGCCCATGGAGCCG...TGGATTTAGTGACCACCCTCCTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR CCA 90 bp CCAAACTCTCGGCCCTCCTGCCGAGCAGCCGTAGTGGCCTGCAGCATGGACCTGTCCCTGAACACTGGGTaGTATAAGCTGTCTGGGCAG +
Preference number: 2 (lower is better)
Translates to: PNSRPSCRAAVVACSMDLSLNTG*YKLSGQ
Trigger: CTGCCCAGACAGCTTATACCACCCAGTGTTCAGGGA...CAGGTCCATGCTGCAGGCCACTACGGCTGCTCGGCAGGAGGGCCGAGAGTTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR CCA 90 bp CCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCACAGTGCAGAGCCTGACTCTGTaGCTGTGGTTCTTAGAGGCC +
Preference number: 2 (lower is better)
Translates to: PAPTDTGPHGEEALLSTVQSLTL*LWFLEA
Trigger: GGCCTCTAAGAACCACAGCCACAGAGTCAGGCTCTG...CACTGTGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR CAA 90 bp CACCCTTCCCTCCATCCACCTAGGAGGAGGTGTACAGGGTGCCACTaGAACACAGCAACAGCGGGAGCTGCTCCTGAGAAGGCGACTCCT +
Preference number: 2 (lower is better)
Translates to: HPSLHPPRRRCTGCH*NTATAGAAPEKATP
Trigger: AGGAGTCGCCTTCTCAGGAGCAGCTCCCGCTGTTGCTGTGTTCAAGTGGCACCCTGTACACCTCCTCCTAGGTGGATGGAGGGAAGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR TCA 90 bp TGCCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCACAGAGGGAAGCACATCAGTaGAGATGGTGCGGATCATCC +
Preference number: 2 (lower is better)
Translates to: CPLPQTRVPTEKRPFFPQREAHQ*RWCGSS
Trigger: GGATGATCCGCACCATCTTCACTGATGTGCTTCCCT...CTGTGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR GCA 90 bp CCTGAGAAGGCGACTCCTGTCCGTCCATGGCTCTTAGGCCAGCTGGGAAAGCTCCTACCACCCCACCTCTaGCCAAGACACTCTCCCCAA +
Preference number: 2 (lower is better)
Translates to: PEKATPVRPWLLGQLGKLLPPHL*PRHSPQ
Trigger: TTGGGGAGAGTGTCTTGGGCAGAGGTGGGGTGGTAG...GAGCTTTCCCAGCTGGCCTAAGAGCCATGGACGGACAGGAGTCGCCTTCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR CCA 90 bp AGCCGTAGTGGCCTGCAGCATGGACCTGTGCCCGCTCCCACAGACACGGGTCCCACCACATCAAAACCCTaGAACGCGATATCCGTTACC +
Preference number: 2 (lower is better)
Translates to: SRSGLQHGPVPAPTDTGPTTSKP*NAISVT
Trigger: GGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGT...GGGACCCGTGTCTGTGGGAGCGGGCACAGGTCCATGCTGCAGGCCACTACGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR CCA 90 bp GCCCCTCCTGTGCTGCTGGGCCCCACTGCTGATTATGGGCCAGCTTGGGTTGCAGCCCTTTCTGTCACCTaGAGAGAGTCATGCTGCACA +
Preference number: 2 (lower is better)
Translates to: APPVLLGPTADYGPAWVAALSVT*RESCCT
Trigger: TGTGCAGCATGACTCTCTCCAGGTGACAGAAAGGGC...TGCAACCCAAGCTGGCCCATAATCAGCAGTGGGGCCCAGCAGCACAGGAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR CAA 90 bp TCACTCTCCGGAGCAGCTGAGTCATTGGGAGGCTTCCGCTGTCACTaGCACTCCTCCTCCAGATCCGTTGAGAAGCCATCCAGGCGTGAC +
Preference number: 2 (lower is better)
Translates to: SLSGAAESLGGFRCH*HSSSRSVEKPSRRD
Trigger: GTCACGCCTGGATGGCTTCTCAACGGATCTGGAGGAGGAGTGCAAGTGACAGCGGAAGCCTCCCAATGACTCAGCTGCTCCGGAGAGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR TCA 90 bp CCTGTGCCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCTTGCTGTCATCTCAGTaGGGCTTTTGGCAACACAGT +
Preference number: 2 (lower is better)
Translates to: PVPAPTDTGPHGEEALLSLLSSQ*GFWQHS
Trigger: ACTGTGTTGCCAAAAGCCTCACTGAGATGACAGCAA...GGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR GCA 90 bp CCAAACTCTCGGCCCTCCTGCCGAGCAGCCGTAGTGGCCTGCAGCATGGACCTGTGGAAAATGCAAGTCTaGTCTGTTCTGGGACACCCA +
Preference number: 2 (lower is better)
Translates to: PNSRPSCRAAVVACSMDLWKMQV*SVLGHP
Trigger: TGGGTGTCCCAGAACAGAGCAGACTTGCATTTTCCA...CAGGTCCATGCTGCAGGCCACTACGGCTGCTCGGCAGGAGGGCCGAGAGTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR CCA 90 bp CTGTGCTGCTGGGCCCCACTGCTGATTATGGGCCAGCTTGGGTTGCAGCTATGTTCCTCCACCCTCCTATaGTGGAACCAAGGCAGGCCT +
Preference number: 2 (lower is better)
Translates to: LCCWAPLLIMGQLGLQLCSSTLL*WNQGRP
Trigger: AGGCCTGCCTTGGTTCCACCATAGGAGGGTGGAGGA...ACATAGCTGCAACCCAAGCTGGCCCATAATCAGCAGTGGGGCCCAGCAGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR TCA 90 bp GTCCTGGCTCCCCTCCCCGTCCCTCCCTACATGATCAGGTCCTCTCAGCTGTCTCTTCCTTCACCTTTCTaGGGCTCACTGGAAACTTGG +
Preference number: 2 (lower is better)
Translates to: VLAPLPVPPYMIRSSQLSLPSPF*GSLETW
Trigger: CCAAGTTTCCAGTGAGCCTCAGAAAGGTGAAGGAAG...AGACAGCTGAGAGGACCTGATCATGTAGGGAGGGACGGGGAGGGGAGCCAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR GCA 90 bp GTCCCCAGGGCACACCCACAGGTCCATAGTTGTCACATCACACTGAGACTGCTGAAGGCCACACCCTTGTaGCTAGCTGCCTCATCTCCC +
Preference number: 2 (lower is better)
Translates to: VPRAHPQVHSCHITLRLLKATPL*LAASSP
Trigger: GGGAGATGAGGCAGCTAGGCACAAGGGTGTGGCCTT...CAGCAGTCTCAGTGTGATGTGACAACTATGGACCTGTGGGTGTGCCCTGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR CCA 90 bp CTGTGCCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCAAATTCACCTGGTCTGTaGGTTCTTCAGAGATCCCTG +
Preference number: 2 (lower is better)
Translates to: LCPLPQTRVPTEKRPFFPNSPGL*VLQRSL
Trigger: CAGGGATCTCTGAAGAACCCACAGACCAGGTGAATT...TGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR CCA 90 bp CTGTGCCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCACTTTCTGAGGCTCACTaGAAACTTGGGGTGATCCAT +
Preference number: 2 (lower is better)
Translates to: LCPLPQTRVPTEKRPFFPLSEAH*KLGVIH
Trigger: ATGGATCACCCCAAGTTTCCAGTGAGCCTCAGAAAG...TGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR CCA 90 bp CAAGTGCACATGACGGGCATCACTCAACTCCACCAGGCAGGCTCCCAACTCCTCTGGTCTGGTCTGGTCTaGTCACTCCTCCACATCCAC +
Preference number: 2 (lower is better)
Translates to: QVHMTGITQLHQAGSQLLWSGLV*SLLHIH
Trigger: GTGGATGTGGAGGAGTGACCAGACCAGACCAGACCA...GAGGAGTTGGGAGCCTGCCTGGTGGAGTTGAGTGATGCCCGTCATGTGCACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR CCA 90 bp CTCCCAACTCCTCGTGCAGAGAAAGAAGTGGGAGGAGGGTGGTCACTAAATCCATGTCTAGGGTGGCCATaGGAGAGGGCAGCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: LPTPRAEKEVGGGWSLNPCLGWP*ERAACR
Trigger: CCTGCAGGCTGCCCTCTCCCATGGCCACCCTAGACA...TGGATTTAGTGACCACCCTCCTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR CCA 90 bp AGTTGTCACATCACACTGAGACTGCTGATACCCTCCAAGGACCTTCCTCTTACAGCAGCTCCTGGGTCCTaGCTCCCCTCCCCGTCCCTC +
Preference number: 2 (lower is better)
Translates to: SCHITLRLLIPSKDLPLTAAPGS*LPSPSL
Trigger: GAGGGACGGGGAGGGGAGCCAGGACCCAGGAGCTGC...TGTAAGAGGAAGGTCCTTGGAGGGTATCAGCAGTCTCAGTGTGATGTGACAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR TCA 90 bp AGTCATTGGGAGGCTTCCGCTGTCACTTGCACTCCTCCTCCAGATCCGTTGAGACAGCCAGGATGCAGGTaGGTAAGACAGCACCTCCTC +
Preference number: 2 (lower is better)
Translates to: SHWEASAVTCTPPPDPLRQPGCR*VRQHLL
Trigger: GAGGAGGTGCTGTCTTACTCACCTGCATCCTGGCTG...TCTCAACGGATCTGGAGGAGGAGTGCAAGTGACAGCGGAAGCCTCCCAATGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR TCA 90 bp CCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCACAGTGGAAGCCATCCAGGCGTaGCTCAATTGTTTACAGTTT +
Preference number: 2 (lower is better)
Translates to: PAPTDTGPHGEEALLSTVEAIQA*LNCLQF
Trigger: AAACTGTAAACAATTGAGTCACGCCTGGATGGCTTC...CACTGTGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR CAA 90 bp CCCCCTCATGGCTCTTGGATGTCATCAACACCCCACTCAGTCATTTaGCAGTCTTCTCACGGGCACGGAAAGGTGTGGCTGGCTTCCTTC +
Preference number: 2 (lower is better)
Translates to: PPHGSWMSSTPHSVI*QSSHGHGKVWLASF
Trigger: GAAGGAAGCCAGCCACACCTTTCCGTGCCCGTGAGAAGACTGCAAAATGACTGAGTGGGGTGTTGATGACATCCAAGAGCCATGAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR TCA 90 bp ACACTGAGACTGCTGATACCCTCCAAGGACCTTCCTCTTACAGCCATGCAGCTCACCACCCGTAGACACTaGCCCGAACCAGCCCCAAAT +
Preference number: 2 (lower is better)
Translates to: TLRLLIPSKDLPLTAMQLTTRRH*PEPAPN
Trigger: ATTTGGGGCTGGTTCGGGTCAGTGTCTACGGGTGGT...GAGCTGCATGGCTGTAAGAGGAAGGTCCTTGGAGGGTATCAGCAGTCTCAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR GCA 90 bp ACACTGAGACTGCTGATACCCTCCAAGGACCTTCCTCTTACAGCCATGCAGCTCACCCTTGTGCCTAGCTaGCTCATCTCCCTCCCAGCT +
Preference number: 2 (lower is better)
Translates to: TLRLLIPSKDLPLTAMQLTLVPS*LISLPA
Trigger: AGCTGGGAGGGAGATGAGGCAGCTAGGCACAAGGGT...GAGCTGCATGGCTGTAAGAGGAAGGTCCTTGGAGGGTATCAGCAGTCTCAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR GCA 90 bp CAAGTGCACATGACGGGCATCACTCAACTCCACCAGGCAGGCTCCCAACTCCTCAGGAGGTGTACAGGGTaGCACTTGAACACAGCAACA +
Preference number: 2 (lower is better)
Translates to: QVHMTGITQLHQAGSQLLRRCTG*HLNTAT
Trigger: TGTTGCTGTGTTCAAGTGGCACCCTGTACACCTCCT...GAGGAGTTGGGAGCCTGCCTGGTGGAGTTGAGTGATGCCCGTCATGTGCACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR CCA 90 bp ACACTGAGACTGCTGATACCCTCCAAGGACCTTCCTCTTACAGCCATGCAGCTCCCCTCTGGTCTGGTCTaGTCTGGTCTGGTCACTCCT +
Preference number: 2 (lower is better)
Translates to: TLRLLIPSKDLPLTAMQLPSGLV*SGLVTP
Trigger: AGGAGTGACCAGACCAGACCAGACCAGACCAGAGGG...GAGCTGCATGGCTGTAAGAGGAAGGTCCTTGGAGGGTATCAGCAGTCTCAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR TCA 90 bp CAAGTGCACATGACGGGCATCACTCAACTCCACCAGGCAGGCTCCCAACTCCTCGAACCAAGGCAGGCCTaGTTCTTTGCCATTGTTTTC +
Preference number: 2 (lower is better)
Translates to: QVHMTGITQLHQAGSQLLEPRQA*FFAIVF
Trigger: GAAAACAATGGCAAAGAATCAGGCCTGCCTTGGTTC...GAGGAGTTGGGAGCCTGCCTGGTGGAGTTGAGTGATGCCCGTCATGTGCACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR TCA 90 bp ACACTGAGACTGCTGATACCCTCCAAGGACCTTCCTCTTACAGCCATGCAGCTCAGACCCAAGTGCACATaGCGGGCATCACTCAACTCC +
Preference number: 2 (lower is better)
Translates to: TLRLLIPSKDLPLTAMQLRPKCT*RASLNS
Trigger: GGAGTTGAGTGATGCCCGTCATGTGCACTTGGGTCT...GAGCTGCATGGCTGTAAGAGGAAGGTCCTTGGAGGGTATCAGCAGTCTCAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR GCA 90 bp GAGAAGCCATCCAGGCGTGACTCAATTGTTTACAGTTTCCTGGGACCAGCAGGGACTTGGGGTGATCCATaGTACTTGCCCAGCCCCAAC +
Preference number: 2 (lower is better)
Translates to: EKPSRRDSIVYSFLGPAGTWGDP*YLPSPN
Trigger: GTTGGGGCTGGGCAAGTAGCATGGATCACCCCAAGT...CCCTGCTGGTCCCAGGAAACTGTAAACAATTGAGTCACGCCTGGATGGCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR CCA 90 bp CTGTGCCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCATATAATGAGCAAAGCTaGCACTCAATGGGCATCAAA +
Preference number: 2 (lower is better)
Translates to: LCPLPQTRVPTEKRPFFPYNEQS*HSMGIK
Trigger: TTTGATGCCCATTGAGTGCCAGCTTTGCTCATTATA...TGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR CCA 90 bp CAAGTGCACATGACGGGCATCACTCAACTCCACCAGGCAGGCTCCCAACTCCTCAGTCGAACAGGAAAATaGGGAGAGTTGGAAACAGCC +
Preference number: 2 (lower is better)
Translates to: QVHMTGITQLHQAGSQLLSRTGK*GELETA
Trigger: GGCTGTTTCCAACTCTCCCCATTTTCCTGTTCGACT...GAGGAGTTGGGAGCCTGCCTGGTGGAGTTGAGTGATGCCCGTCATGTGCACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR CCA 90 bp CTCCCAACTCCTCGTGCAGAGAAAGAAGTGGGAGGAGGGTGGTCACTAAATCCAGAGCAGCTGAGTCATTaGGAGGCTTCCGCTGTCACT +
Preference number: 2 (lower is better)
Translates to: LPTPRAEKEVGGGWSLNPEQLSH*EASAVT
Trigger: AGTGACAGCGGAAGCCTCCCAATGACTCAGCTGCTC...TGGATTTAGTGACCACCCTCCTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR CCA 90 bp CTCCCAACTCCTCGTGCAGAGAAAGAAGTGGGAGGAGGGTGGTCACTAAATCCACAGAGCCTGACTCTGTaGCTGTGGTTCTTAGAGGCC +
Preference number: 2 (lower is better)
Translates to: LPTPRAEKEVGGGWSLNPQSLTL*LWFLEA
Trigger: GGCCTCTAAGAACCACAGCCACAGAGTCAGGCTCTG...TGGATTTAGTGACCACCCTCCTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR CAA 90 bp CATTGGGAGGCTTCCGCTGTCACTTGCACTCCTCCTCCAGATCCGTaGAGAAGCCATCCAGGCGTGACTCAATTGTTTACAGTTTCCTGG +
Preference number: 2 (lower is better)
Translates to: HWEASAVTCTPPPDP*RSHPGVTQLFTVSW
Trigger: CCAGGAAACTGTAAACAATTGAGTCACGCCTGGATGGCTTCTCAACGGATCTGGAGGAGGAGTGCAAGTGACAGCGGAAGCCTCCCAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR TCA 90 bp GAGAAGCCATCCAGGCGTGACTCAATTGTTTACAGTTTCCTGGGACCAGCAGGGAGGGAAGCACATCAGTaGAGATGGTGCGGATCATCC +
Preference number: 2 (lower is better)
Translates to: EKPSRRDSIVYSFLGPAGREAHQ*RWCGSS
Trigger: GGATGATCCGCACCATCTTCACTGATGTGCTTCCCT...CCCTGCTGGTCCCAGGAAACTGTAAACAATTGAGTCACGCCTGGATGGCTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR TCA 90 bp GATTATGGGCCAGCTTGGGTTGCAGCTATGTGGGTCCAAACTCTCGGCCCTCCTTTCTTCAGAGATCCCTaGACACTGGGTGGTATAAGC +
Preference number: 2 (lower is better)
Translates to: DYGPAWVAAMWVQTLGPPFFRDP*TLGGIS
Trigger: GCTTATACCACCCAGTGTTCAGGGATCTCTGAAGAA...AGGAGGGCCGAGAGTTTGGACCCACATAGCTGCAACCCAAGCTGGCCCATAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR TCA 90 bp CGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCACAGTGTTTGGAAACAGCCTTGTTaGCATGGTCTCATTCTCTTT +
Preference number: 2 (lower is better)
Translates to: RSHRHGSPRRRGPSFHSVWKQPC*HGLILF
Trigger: AAAGAGAATGAGACCATGTCAACAAGGCTGTTTCCA...AACACTGTGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR GCA 90 bp CTGTGCTGCTGGGCCCCACTGCTGATTATGGGCCAGCTTGGGTTGCAGCTATGTGCAGGCCTGATTCTTTaGCATTGTTTTCAAGGAAGC +
Preference number: 2 (lower is better)
Translates to: LCCWAPLLIMGQLGLQLCAGLIL*HCFQGS
Trigger: GCTTCCTTGAAAACAATGGCAAAGAATCAGGCCTGC...ACATAGCTGCAACCCAAGCTGGCCCATAATCAGCAGTGGGGCCCAGCAGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR CCA 90 bp GTCCCCAGGGCACACCCACAGGTCCATAGTTGTCACATCACACTGAGACTGCTGAAAGCTGGCACTCAATaGGCATCAAAGGGAAGCACA +
Preference number: 2 (lower is better)
Translates to: VPRAHPQVHSCHITLRLLKAGTQ*ASKGST
Trigger: TGTGCTTCCCTTTGATGCCCATTGAGTGCCAGCTTT...CAGCAGTCTCAGTGTGATGTGACAACTATGGACCTGTGGGTGTGCCCTGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR CCA 90 bp AGTCATTGGGAGGCTTCCGCTGTCACTTGCACTCCTCCTCCAGATCCGTTGAGAGGCTCACTGGAAACTTaGGGTGATCCATGCTACTTG +
Preference number: 2 (lower is better)
Translates to: SHWEASAVTCTPPPDPLRGSLET*GDPCYL
Trigger: CAAGTAGCATGGATCACCCCAAGTTTCCAGTGAGCC...TCTCAACGGATCTGGAGGAGGAGTGCAAGTGACAGCGGAAGCCTCCCAATGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR CCA 90 bp ACTCAACTCCACCAGGCAGGCTCCCAACTCCTCGTGCAGAGAAAGAAGTGGGAGTTGCATGTGAAAGTCTaGCTCCCTCAGAGTATCACG +
Preference number: 2 (lower is better)
Translates to: TQLHQAGSQLLVQRKKWELHVKV*LPQSIT
Trigger: CGTGATACTCTGAGGGAGCCAGACTTTCACATGCAA...CTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAGCCTGCCTGGTGGAGTTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR TCA 90 bp ACTCAACTCCACCAGGCAGGCTCCCAACTCCTCGTGCAGAGAAAGAAGTGGGAGAGTTGCTTTTCCTCCTaGAGACCTTGCTCACATGAA +
Preference number: 2 (lower is better)
Translates to: TQLHQAGSQLLVQRKKWESCFSS*RPCSHE
Trigger: TTCATGTGAGCAAGGTCTTCAGGAGGAAAAGCAACT...CTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAGCCTGCCTGGTGGAGTTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR CCA 90 bp AGTCATTGGGAGGCTTCCGCTGTCACTTGCACTCCTCCTCCAGATCCGTTGAGAAGTCGAACAGGAAAATaGGGAGAGTTGGAAACAGCC +
Preference number: 2 (lower is better)
Translates to: SHWEASAVTCTPPPDPLRSRTGK*GELETA
Trigger: GGCTGTTTCCAACTCTCCCCATTTTCCTGTTCGACT...TCTCAACGGATCTGGAGGAGGAGTGCAAGTGACAGCGGAAGCCTCCCAATGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR CCA 90 bp AGTTGTCACATCACACTGAGACTGCTGATACCCTCCAAGGACCTTCCTCTTACAAGCCTCCGATCCCTCTaGTCTGGTCTGGTCTGGTCT +
Preference number: 2 (lower is better)
Translates to: SCHITLRLLIPSKDLPLTSLRSL*SGLVWS
Trigger: AGACCAGACCAGACCAGACCAGAGGGATCGGAGGCT...TGTAAGAGGAAGGTCCTTGGAGGGTATCAGCAGTCTCAGTGTGATGTGACAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR GCA 90 bp AGTTGTCACATCACACTGAGACTGCTGATACCCTCCAAGGACCTTCCTCTTACAGCTCCCAACTCCTCGTaGAGAGAAAGAAGTGGGAGG +
Preference number: 2 (lower is better)
Translates to: SCHITLRLLIPSKDLPLTAPNSS*RERSGR
Trigger: CCTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAGC...TGTAAGAGGAAGGTCCTTGGAGGGTATCAGCAGTCTCAGTGTGATGTGACAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR CCA 90 bp ACACTGAGACTGCTGATACCCTCCAAGGACCTTCCTCTTACAGCCATGCAGCTCACCACATCAAAACCCTaGAACGCGATATCCGTTACC +
Preference number: 2 (lower is better)
Translates to: TLRLLIPSKDLPLTAMQLTTSKP*NAISVT
Trigger: GGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGT...GAGCTGCATGGCTGTAAGAGGAAGGTCCTTGGAGGGTATCAGCAGTCTCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR CCA 90 bp TTAAGCACATTGGTAGACCCAAGTGCACATGACGGGCATCACTCAACTCCACCATCCCTGAACACTGGGTaGTATAAGCTGTCTGGGCAG +
Preference number: 2 (lower is better)
Translates to: LSTLVDPSAHDGHHSTPPSLNTG*YKLSGQ
Trigger: CTGCCCAGACAGCTTATACCACCCAGTGTTCAGGGA...TGGTGGAGTTGAGTGATGCCCGTCATGTGCACTTGGGTCTACCAATGTGCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR CAA 90 bp ACCTCCTCCACCCTCCTATGGTGGAACCAAGGCAGGCCTGATTCTTaGCCATTGTTTTCAAGGAAGCTAGCTGTAATGAGCAACTTCCCA +
Preference number: 2 (lower is better)
Translates to: TSSTLLWWNQGRPDS*PLFSRKLAVMSNFP
Trigger: TGGGAAGTTGCTCATTACAGCTAGCTTCCTTGAAAACAATGGCAAAGAATCAGGCCTGCCTTGGTTCCACCATAGGAGGGTGGAGGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR GCA 90 bp AGTTGTCACATCACACTGAGACTGCTGATACCCTCCAAGGACCTTCCTCTTACACGAACCAGCCCCAAATaGCCCGTTGCATGTGAAAGT +
Preference number: 2 (lower is better)
Translates to: SCHITLRLLIPSKDLPLTRTSPK*PVACES
Trigger: ACTTTCACATGCAACGGGGCATTTGGGGCTGGTTCG...TGTAAGAGGAAGGTCCTTGGAGGGTATCAGCAGTCTCAGTGTGATGTGACAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR CCA 90 bp GTCCCCAGGGCACACCCACAGGTCCATAGTTGTCACATCACACTGAGACTGCTGTATAATGAGCAAAGCTaGCACTCAATGGGCATCAAA +
Preference number: 2 (lower is better)
Translates to: VPRAHPQVHSCHITLRLLYNEQS*HSMGIK
Trigger: TTTGATGCCCATTGAGTGCCAGCTTTGCTCATTATA...CAGCAGTCTCAGTGTGATGTGACAACTATGGACCTGTGGGTGTGCCCTGGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR CCA 90 bp GAAGCCCATCTGGCCTTAAGCACATTGGTAGACCCAAGTGCACATGACGGGCATAAGTCTGCTCTGTTCTaGGACACCCAAACTAAAAAG +
Preference number: 2 (lower is better)
Translates to: EAHLALSTLVDPSAHDGHKSALF*DTQTKK
Trigger: CTTTTTAGTTTGGGTGTCCCAGAACAGAGCAGACTT...ATGCCCGTCATGTGCACTTGGGTCTACCAATGTGCTTAAGGCCAGATGGGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR CCA 90 bp AGTTGTCACATCACACTGAGACTGCTGATACCCTCCAAGGACCTTCCTCTTACAACCACATCAAAACCCTaGAACGCGATATCCGTTACC +
Preference number: 2 (lower is better)
Translates to: SCHITLRLLIPSKDLPLTTTSKP*NAISVT
Trigger: GGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGT...TGTAAGAGGAAGGTCCTTGGAGGGTATCAGCAGTCTCAGTGTGATGTGACAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR CCA 90 bp ATCACACTGAGACTGCTGATACCCTCCAAGGACCTTCCTCTTACAGCCATGCAGAAGTCTGCTCTGTTCTaGGACACCCAAACTAAAAAG +
Preference number: 2 (lower is better)
Translates to: ITLRLLIPSKDLPLTAMQKSALF*DTQTKK
Trigger: CTTTTTAGTTTGGGTGTCCCAGAACAGAGCAGACTT...CTGCATGGCTGTAAGAGGAAGGTCCTTGGAGGGTATCAGCAGTCTCAGTGTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR CCA 90 bp AGTTGTCACATCACACTGAGACTGCTGATACCCTCCAAGGACCTTCCTCTTACACTTTCTGAGGCTCACTaGAAACTTGGGGTGATCCAT +
Preference number: 2 (lower is better)
Translates to: SCHITLRLLIPSKDLPLTLSEAH*KLGVIH
Trigger: ATGGATCACCCCAAGTTTCCAGTGAGCCTCAGAAAG...TGTAAGAGGAAGGTCCTTGGAGGGTATCAGCAGTCTCAGTGTGATGTGACAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR CAA 90 bp TGTCACCTGGAGAGAGTCATGCTGCACATAGATAAGATTTTATGTTaGAACATCGCTGGGGATGATAGTTGGTTAGGTCCACCCACCCTT +
Preference number: 2 (lower is better)
Translates to: CHLERVMLHIDKILC*NIAGDDSWLGPPTL
Trigger: AAGGGTGGGTGGACCTAACCAACTATCATCCCCAGCGATGTTCAAACATAAAATCTTATCTATGTGCAGCATGACTCTCTCCAGGTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR TCA 90 bp GATAAGATTTTATGTTTGAACATCGCTGGGGATGATAGTTGGTTAGGTCCACCCTTCTTCAGAGATCCCTaGACACTGGGTGGTATAAGC +
Preference number: 2 (lower is better)
Translates to: DKILCLNIAGDDSWLGPPFFRDP*TLGGIS
Trigger: GCTTATACCACCCAGTGTTCAGGGATCTCTGAAGAA...GGGTGGACCTAACCAACTATCATCCCCAGCGATGTTCAAACATAAAATCTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR GCA 90 bp AGAGTCATGCTGCACATAGATAAGATTTTATGTTTGAACATCGCTGGGGATGATCCCACTCAGTCATTTTaGAGTCTTCTCACGGGCACG +
Preference number: 2 (lower is better)
Translates to: RVMLHIDKILCLNIAGDDPTQSF*SLLTGT
Trigger: CGTGCCCGTGAGAAGACTGCAAAATGACTGAGTGGG...ATCATCCCCAGCGATGTTCAAACATAAAATCTTATCTATGTGCAGCATGACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR GCA 90 bp AGAGTCATGCTGCACATAGATAAGATTTTATGTTTGAACATCGCTGGGGATGATAACACCACCCCTTCTTaGTGTCATCTCAGTGAGGCT +
Preference number: 2 (lower is better)
Translates to: RVMLHIDKILCLNIAGDDNTTPS*CHLSEA
Trigger: AGCCTCACTGAGATGACAGCAAGAAGGGGTGGTGTT...ATCATCCCCAGCGATGTTCAAACATAAAATCTTATCTATGTGCAGCATGACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR CCA 90 bp AGAGTCATGCTGCACATAGATAAGATTTTATGTTTGAACATCGCTGGGGATGATAAAGCTGGCACTCAATaGGCATCAAAGGGAAGCACA +
Preference number: 2 (lower is better)
Translates to: RVMLHIDKILCLNIAGDDKAGTQ*ASKGST
Trigger: TGTGCTTCCCTTTGATGCCCATTGAGTGCCAGCTTT...ATCATCCCCAGCGATGTTCAAACATAAAATCTTATCTATGTGCAGCATGACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR GCA 72 bp TGCCGAGCAGCCGTAGTGGCCTGCAGCATGGACCTGTaGCCGCTCCCACAGACACGGGTCCCCACGGAGAAG +
Preference number: 3 (lower is better)
Translates to: CRAAVVACSMDL*PLPQTRVPTEK
Trigger: CTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCACAGGTCCATGCTGCAGGCCACTACGGCTGCTCGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR GCA 72 bp AACTCTCGGCCCTCCTGCCGAGCAGCCGTAGTGGCCTaGAGCATGGACCTGTGCCCGCTCCCACAGACACGG +
Preference number: 3 (lower is better)
Translates to: NSRPSCRAAVVA*SMDLCPLPQTR
Trigger: CCGTGTCTGTGGGAGCGGGCACAGGTCCATGCTGCAGGCCACTACGGCTGCTCGGCAGGAGGGCCGAGAGTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR CAA 90 bp GGGTCCAAACTCTCGGCCCTCCTGCCGAGCAGCCGTAGTGGCCTGCAGCATGGAGGTGATCCATGCTACTaGCCCAGCCCCAACACCACC +
Preference number: 3 (lower is better)
Translates to: GSKLSALLPSSRSGLQHGGDPCY*PSPNTT
Trigger: GGTGGTGTTGGGGCTGGGCAAGTAGCATGGATCACC...TCCATGCTGCAGGCCACTACGGCTGCTCGGCAGGAGGGCCGAGAGTTTGGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR GCA 72 bp GGTTGCAGCTATGTGGGTCCAAACTCTCGGCCCTCCTaGCGAGCAGCCGTAGTGGCCTGCAGCATGGACCTG +
Preference number: 3 (lower is better)
Translates to: GCSYVGPNSRPS*RAAVVACSMDL
Trigger: CAGGTCCATGCTGCAGGCCACTACGGCTGCTCGGCAGGAGGGCCGAGAGTTTGGACCCACATAGCTGCAACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR CAA 90 bp CCAAACTCTCGGCCCTCCTGCCGAGCAGCCGTAGTGGCCTGCAGCATGGACCTGCTCAAGGCCACACCCTaGTGCCTAGCTGCCTCATCT +
Preference number: 3 (lower is better)
Translates to: PNSRPSCRAAVVACSMDLLKATP*CLAASS
Trigger: AGATGAGGCAGCTAGGCACAAGGGTGTGGCCTTGAG...CAGGTCCATGCTGCAGGCCACTACGGCTGCTCGGCAGGAGGGCCGAGAGTTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR CAA 90 bp GCCCCTCCTGTGCTGCTGGGCCCCACTGCTGATTATGGGCCAGCTTGGGTTGCAGGCTTCCGCTGTCACTaGCACTCCTCCTCCAGATCC +
Preference number: 3 (lower is better)
Translates to: APPVLLGPTADYGPAWVAGFRCH*HSSSRS
Trigger: GGATCTGGAGGAGGAGTGCAAGTGACAGCGGAAGCC...TGCAACCCAAGCTGGCCCATAATCAGCAGTGGGGCCCAGCAGCACAGGAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR GCA 72 bp TGCCTTCTTTCTCAAGGCCACACCCTTGTGCCTAGCTaGCTCATCTCCCTCCCAGCTGCCAGGGAGGGACGG +
Preference number: 3 (lower is better)
Translates to: CLLSQGHTLVPS*LISLPAAREGR
Trigger: CCGTCCCTCCCTGGCAGCTGGGAGGGAGATGAGGCAGCTAGGCACAAGGGTGTGGCCTTGAGAAAGAAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR CCA 72 bp GGAGCTGCTCCTGAGAAGGCGACTCCTGTCCGTCCATaGCTCTTAGGCCAGCTGGGAAAGCTCTCAGGCAGG +
Preference number: 3 (lower is better)
Translates to: GAAPEKATPVRP*LLGQLGKLSGR
Trigger: CCTGCCTGAGAGCTTTCCCAGCTGGCCTAAGAGCCATGGACGGACAGGAGTCGCCTTCTCAGGAGCAGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR CCA 72 bp GCAGCCTTACCTCTGGGTCTGCAGAGCCTGACTCTGTaGCTGTGGTTCTTAGAGGCCCAGCTCAGGGGGCCT +
Preference number: 3 (lower is better)
Translates to: AALPLGLQSLTL*LWFLEAQLRGP
Trigger: AGGCCCCCTGAGCTGGGCCTCTAAGAACCACAGCCACAGAGTCAGGCTCTGCAGACCCAGAGGTAAGGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR CCA 72 bp TCCCTCAGAGTATCACGGGTGGGTCTCTGTCTAGGGTaGCCATGGGAGAGGGCAGCCTGCAGGCAAGGAGAG +
Preference number: 3 (lower is better)
Translates to: SLRVSRVGLCLG*PWERAACRQGE
Trigger: CTCTCCTTGCCTGCAGGCTGCCCTCTCCCATGGCCACCCTAGACAGAGACCCACCCGTGATACTCTGAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR CAA 90 bp CCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCACAGTGTCTCAAGGCCACACCCTaGTGCCTAGCTGCCTCATCT +
Preference number: 3 (lower is better)
Translates to: PLPQTRVPTEKRPFFPQCLKATP*CLAASS
Trigger: AGATGAGGCAGCTAGGCACAAGGGTGTGGCCTTGAG...ACACTGTGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR CCA 72 bp AGAGTATCACGGGTGGGTCTCTGTCTAGGGTGGCCATaGGAGAGGGCAGCCTGCAGGCAAGGAGAGGAGTGT +
Preference number: 3 (lower is better)
Translates to: RVSRVGLCLGWP*ERAACRQGEEC
Trigger: ACACTCCTCTCCTTGCCTGCAGGCTGCCCTCTCCCATGGCCACCCTAGACAGAGACCCACCCGTGATACTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR CCA 72 bp ACTGCTGATTATGGGCCAGCTTGGGTTGCAGCTATGTaGGTCCAAACTCTCGGCCCTCCTGCCGAGCAGCCG +
Preference number: 3 (lower is better)
Translates to: TADYGPAWVAAM*VQTLGPPAEQP
Trigger: CGGCTGCTCGGCAGGAGGGCCGAGAGTTTGGACCCACATAGCTGCAACCCAAGCTGGCCCATAATCAGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR CCA 72 bp GTGCTGCTGGGCCCCACTGCTGATTATGGGCCAGCTTaGGTTGCAGCTATGTGGGTCCAAACTCTCGGCCCT +
Preference number: 3 (lower is better)
Translates to: VLLGPTADYGPA*VAAMWVQTLGP
Trigger: AGGGCCGAGAGTTTGGACCCACATAGCTGCAACCCAAGCTGGCCCATAATCAGCAGTGGGGCCCAGCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR TCA 72 bp GTGCCACTTGAACACAGCAACAGCGGGAGCTGCTCCTaGGAAGGCGACTCCTGTCCGTCCATGGCTCTTAGG +
Preference number: 3 (lower is better)
Translates to: VPLEHSNSGSCS*EGDSCPSMALR
Trigger: CCTAAGAGCCATGGACGGACAGGAGTCGCCTTCTCAGGAGCAGCTCCCGCTGTTGCTGTGTTCAAGTGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR GCA 72 bp CCTTCCCTCCATCCACCTAGGAGGAGGTGTACAGGGTaGCACTTGAACACAGCAACAGCGGGAGCTGCTCCT +
Preference number: 3 (lower is better)
Translates to: PSLHPPRRRCTG*HLNTATAGAAP
Trigger: AGGAGCAGCTCCCGCTGTTGCTGTGTTCAAGTGGCACCCTGTACACCTCCTCCTAGGTGGATGGAGGGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR CAA 90 bp GGAGGAGGGTGGTCACTAAATCCACCACCCGTAGACACTGACCCGAACCAGCCCCCCCACTCAGTCATTTaGCAGTCTTCTCACGGGCAC +
Preference number: 3 (lower is better)
Translates to: GGGWSLNPPPVDTDPNQPPHSVI*QSSHGH
Trigger: GTGCCCGTGAGAAGACTGCAAAATGACTGAGTGGGG...GGGCTGGTTCGGGTCAGTGTCTACGGGTGGTGGATTTAGTGACCACCCTCCTCC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR CAA 90 bp ACTCAACTCCACCAGGCAGGCTCCCAACTCCTCGTGCAGAGAAAGAAGTGGGAGCCTCCTCCAGATCCGTaGAGAAGCCATCCAGGCGTG +
Preference number: 3 (lower is better)
Translates to: TQLHQAGSQLLVQRKKWEPPPDP*RSHPGV
Trigger: CACGCCTGGATGGCTTCTCAACGGATCTGGAGGAGG...CTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAGCCTGCCTGGTGGAGTTGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR CAA 90 bp CTGTGCCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCAGGAAAATGGGGAGAGTaGGAAACAGCCTTGTTGACA +
Preference number: 3 (lower is better)
Translates to: LCPLPQTRVPTEKRPFFPGKWGE*ETALLT
Trigger: TGTCAACAAGGCTGTTTCCAACTCTCCCCATTTTCC...TGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR TCA 72 bp ACTGACCCGAACCAGCCCCAAATGCCCCGTTGCATGTaGAAGTCTGGCTCCCTCAGAGTATCACGGGTGGGT +
Preference number: 3 (lower is better)
Translates to: TDPNQPQMPRCM*KSGSLRVSRVG
Trigger: ACCCACCCGTGATACTCTGAGGGAGCCAGACTTTCACATGCAACGGGGCATTTGGGGCTGGTTCGGGTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR TCA 72 bp AGGAGGGTGGTCACTAAATCCACCACCCGTAGACACTaGCCCGAACCAGCCCCAAATGCCCCGTTGCATGTG +
Preference number: 3 (lower is better)
Translates to: RRVVTKSTTRRH*PEPAPNAPLHV
Trigger: CACATGCAACGGGGCATTTGGGGCTGGTTCGGGTCAGTGTCTACGGGTGGTGGATTTAGTGACCACCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR CAA 90 bp CCAAACTCTCGGCCCTCCTGCCGAGCAGCCGTAGTGGCCTGCAGCATGGACCTGCCTGATTCTTTGCCATaGTTTTCAAGGAAGCTAGCT +
Preference number: 3 (lower is better)
Translates to: PNSRPSCRAAVVACSMDLPDSLP*FSRKLA
Trigger: AGCTAGCTTCCTTGAAAACAATGGCAAAGAATCAGG...CAGGTCCATGCTGCAGGCCACTACGGCTGCTCGGCAGGAGGGCCGAGAGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR CAA 90 bp GTCCCCAGGGCACACCCACAGGTCCATAGTTGTCACATCACACTGAGACTGCTGTGTACAGGGTGCCACTaGAACACAGCAACAGCGGGA +
Preference number: 3 (lower is better)
Translates to: VPRAHPQVHSCHITLRLLCTGCH*NTATAG
Trigger: TCCCGCTGTTGCTGTGTTCAAGTGGCACCCTGTACA...CAGCAGTCTCAGTGTGATGTGACAACTATGGACCTGTGGGTGTGCCCTGGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR TCA 72 bp TCCTTCACCTTTCTGAGGCTCACTGGAAACTTGGGGTaGTCCATGCTACTTGCCCAGCCCCAACACCACCCC +
Preference number: 3 (lower is better)
Translates to: SFTFLRLTGNLG*SMLLAQPQHHP
Trigger: GGGGTGGTGTTGGGGCTGGGCAAGTAGCATGGATCACCCCAAGTTTCCAGTGAGCCTCAGAAAGGTGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR GCA 72 bp GAGCAGCTGAGTCATTGGGAGGCTTCCGCTGTCACTTaGACTCCTCCTCCAGATCCGTTGAGAAGCCATCCA +
Preference number: 3 (lower is better)
Translates to: EQLSHWEASAVT*TPPPDPLRSHP
Trigger: TGGATGGCTTCTCAACGGATCTGGAGGAGGAGTGCAAGTGACAGCGGAAGCCTCCCAATGACTCAGCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR CCA 72 bp GAACCAGCCCCAAATGCCCCGTTGCATGTGAAAGTCTaGCTCCCTCAGAGTATCACGGGTGGGTCTCTGTCT +
Preference number: 3 (lower is better)
Translates to: EPAPNAPLHVKV*LPQSITGGSLS
Trigger: AGACAGAGACCCACCCGTGATACTCTGAGGGAGCCAGACTTTCACATGCAACGGGGCATTTGGGGCTGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR CAA 90 bp AGTCATTGGGAGGCTTCCGCTGTCACTTGCACTCCTCCTCCAGATCCGTTGAGACCCCACTCAGTCATTTaGCAGTCTTCTCACGGGCAC +
Preference number: 3 (lower is better)
Translates to: SHWEASAVTCTPPPDPLRPHSVI*QSSHGH
Trigger: GTGCCCGTGAGAAGACTGCAAAATGACTGAGTGGGG...TCTCAACGGATCTGGAGGAGGAGTGCAAGTGACAGCGGAAGCCTCCCAATGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR CAA 90 bp CTCCCAACTCCTCGTGCAGAGAAAGAAGTGGGAGGAGGGTGGTCACTAAATCCAGCCCCAAATGCCCCGTaGCATGTGAAAGTCTGGCTC +
Preference number: 3 (lower is better)
Translates to: LPTPRAEKEVGGGWSLNPAPNAP*HVKVWL
Trigger: GAGCCAGACTTTCACATGCAACGGGGCATTTGGGGC...TGGATTTAGTGACCACCCTCCTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR TCA 72 bp GGCACGGAAAGGTGTGGCTGGCTTCCTTCACCTTTCTaGGGCTCACTGGAAACTTGGGGTGATCCATGCTAC +
Preference number: 3 (lower is better)
Translates to: GTERCGWLPSPF*GSLETWGDPCY
Trigger: GTAGCATGGATCACCCCAAGTTTCCAGTGAGCCTCAGAAAGGTGAAGGAAGCCAGCCACACCTTTCCGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR GCA 72 bp GCTCTTGGATGTCATCAACACCCCACTCAGTCATTTTaGAGTCTTCTCACGGGCACGGAAAGGTGTGGCTGG +
Preference number: 3 (lower is better)
Translates to: ALGCHQHPTQSF*SLLTGTERCGW
Trigger: CCAGCCACACCTTTCCGTGCCCGTGAGAAGACTGCAAAATGACTGAGTGGGGTGTTGATGACATCCAAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR CAA 90 bp GCCCCTCCTGTGCTGCTGGGCCCCACTGCTGATTATGGGCCAGCTTGGGTTGCAGATAAGATTTTATGTTaGAACATCGCTGGGGATGAT +
Preference number: 3 (lower is better)
Translates to: APPVLLGPTADYGPAWVADKILC*NIAGDD
Trigger: ATCATCCCCAGCGATGTTCAAACATAAAATCTTATC...TGCAACCCAAGCTGGCCCATAATCAGCAGTGGGGCCCAGCAGCACAGGAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR CCA 72 bp GAAGATGGTGCGGATCATCCCACCACATCAAAACCCTaGAACGCGATATCCGTTACCAGAATTCAGGGCCAG +
Preference number: 3 (lower is better)
Translates to: EDGADHPTTSKP*NAISVTRIQGQ
Trigger: CTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR CAA 90 bp ACACTGAGACTGCTGATACCCTCCAAGGACCTTCCTCTTACAGCCATGCAGCTCCTGGCCTTAAGCACATaGGTAGACCCAAGTGCACAT +
Preference number: 3 (lower is better)
Translates to: TLRLLIPSKDLPLTAMQLLALST*VDPSAH
Trigger: ATGTGCACTTGGGTCTACCAATGTGCTTAAGGCCAG...GAGCTGCATGGCTGTAAGAGGAAGGTCCTTGGAGGGTATCAGCAGTCTCAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR TCA 72 bp CTGGCACTCAATGGGCATCAAAGGGAAGCACATCAGTaGAGATGGTGCGGATCATCCCACCACATCAAAACC +
Preference number: 3 (lower is better)
Translates to: LALNGHQREAHQ*RWCGSSHHIKT
Trigger: GGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGATGCCCATTGAGTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR CCA 72 bp ATCCCACTCGCTCTGTCATGCAAAACCACCCCACAATaGATCCTTCTCATCATTTCACTCTCCGGAGCAGCT +
Preference number: 3 (lower is better)
Translates to: IPLALSCKTTPQ*ILLIISLSGAA
Trigger: AGCTGCTCCGGAGAGTGAAATGATGAGAAGGATCCATTGTGGGGTGGTTTTGCATGACAGAGCGAGTGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR TCA 72 bp CCTCAGTTGCTTTTCCTCCTGAAGACCTTGCTCACATaGAGTCTCATCAGTTACTCCTCATCCCACTCGCTC +
Preference number: 3 (lower is better)
Translates to: PQLLFLLKTLLT*SLISYSSSHSL
Trigger: GAGCGAGTGGGATGAGGAGTAACTGATGAGACTTCATGTGAGCAAGGTCTTCAGGAGGAAAAGCAACTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR CAA 90 bp CTCCCAACTCCTCGTGCAGAGAAAGAAGTGGGAGGAGGGTGGTCACTAAATCCATTGGAAACAGCCTTGTaGACATGGTCTCATTCTCTT +
Preference number: 3 (lower is better)
Translates to: LPTPRAEKEVGGGWSLNPLETAL*TWSHSL
Trigger: AAGAGAATGAGACCATGTCAACAAGGCTGTTTCCAA...TGGATTTAGTGACCACCCTCCTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR CCA 72 bp CCAGAAGGGACTGGAAAATGCAAGTCTGCTCTGTTCTaGGACACCCAAACTAAAAAGGGACTTCACTCATCC +
Preference number: 3 (lower is better)
Translates to: PEGTGKCKSALF*DTQTKKGLHSS
Trigger: GGATGAGTGAAGTCCCTTTTTAGTTTGGGTGTCCCAGAACAGAGCAGACTTGCATTTTCCAGTCCCTTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR-3UTR CAA 90 bp AGTTGTCACATCACACTGAGACTGCTGATACCCTCCAAGGACCTTCCTCTTACAGAGTTGGAAACAGCCTaGTTGACATGGTCTCATTCT +
Preference number: 3 (lower is better)
Translates to: SCHITLRLLIPSKDLPLTELETA*LTWSHS
Trigger: AGAATGAGACCATGTCAACAAGGCTGTTTCCAACTC...TGTAAGAGGAAGGTCCTTGGAGGGTATCAGCAGTCTCAGTGTGATGTGACAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR-3UTR CAA 90 bp AGTTGTCACATCACACTGAGACTGCTGATACCCTCCAAGGACCTTCCTCTTACATTGGAAACAGCCTTGTaGACATGGTCTCATTCTCTT +
Preference number: 3 (lower is better)
Translates to: SCHITLRLLIPSKDLPLTLETAL*TWSHSL
Trigger: AAGAGAATGAGACCATGTCAACAAGGCTGTTTCCAA...TGTAAGAGGAAGGTCCTTGGAGGGTATCAGCAGTCTCAGTGTGATGTGACAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR TCA 72 bp CAGATCCTACAAGTAGACCTCAGTTGCTTTTCCTCCTaGAGACCTTGCTCACATGAAGTCTCATCAGTTACT +
Preference number: 3 (lower is better)
Translates to: QILQVDLSCFSS*RPCSHEVSSVT
Trigger: AGTAACTGATGAGACTTCATGTGAGCAAGGTCTTCAGGAGGAAAAGCAACTGAGGTCTACTTGTAGGATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR CCA 72 bp TTTTTGGACTTAGAAATCAGTAATTCACCTGGTCTGTaGGTTCTTCAGAGATCCCTGAACACTGGGTGGTAT +
Preference number: 3 (lower is better)
Translates to: FLDLEISNSPGL*VLQRSLNTGWY
Trigger: ATACCACCCAGTGTTCAGGGATCTCTGAAGAACCCACAGACCAGGTGAATTACTGATTTCTAAGTCCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp AGCCGTAGTGGCCTGCAGCATGGACCTGTGCCCGCTCCCACAGACACGGGTCCCCCAGCTCAGGGGGCCTaGGCCTCCGATCCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: SRSGLQHGPVPAPTDTGPPAQGA*ASDPSG
Trigger: ACCAGAGGGATCGGAGGCTCAGGCCCCCTGAGCTGG...GGGACCCGTGTCTGTGGGAGCGGGCACAGGTCCATGCTGCAGGCCACTACGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp CCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCACAGTGGGCACTCCACCAGGGTaGACAGGGACGGGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: PAPTDTGPHGEEALLSTVGTPPG*TGTGRG
Trigger: CCCCCTTCCCGTCCCTGTGCACCCTGGTGGAGTGCC...CACTGTGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp CCTGTGCCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCGCAGCCGTAGTGGCCTaGAGCATGGACCTGTGCCCG +
Preference number: 4 (lower is better)
Translates to: PVPAPTDTGPHGEEALLSAAVVA*SMDLCP
Trigger: CGGGCACAGGTCCATGCTGCAGGCCACTACGGCTGC...GGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp CCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCACAGTGGGATGGCCAGCAGGTTaGGGAGCAGGCCCAGGACGA +
Preference number: 4 (lower is better)
Translates to: PAPTDTGPHGEEALLSTVGWPAG*GAGPGR
Trigger: TCGTCCTGGGCCTGCTCCTCAACCTGCTGGCCATCC...CACTGTGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp CACATGACGGGCATCACTCAACTCCACCAGGCAGGCTCCCAACTCCTCGTGCAGCGGCTCCATGGGCAGTaGCACGGGTGCCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: HMTGITQLHQAGSQLLVQRLHGQ*HGCQLP
Trigger: GGGCAGCTGGCACCCGTGGCACTGCCCATGGAGCCG...CTGCACGAGGAGTTGGGAGCCTGCCTGGTGGAGTTGAGTGATGCCCGTCATGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp ACCCACCCTGCACTCCCTGCAGGCTTCAAGCCTAGGGCCACGGCTCAGCTTCCCACCCTGGAAGGCCGGTaGGCCCTGATGTTCATGCGG +
Preference number: 4 (lower is better)
Translates to: THPALPAGFKPRATAQLPTLEGR*ALMFMR
Trigger: CCGCATGAACATCAGGGCCCACCGGCCTTCCAGGGT...GGGAAGCTGAGCCGTGGCCCTAGGCTTGAAGCCTGCAGGGAGTGCAGGGTGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp CCAAACTCTCGGCCCTCCTGCCGAGCAGCCGTAGTGGCCTGCAGCATGGACCTGAGCCCCGGGAGATCGTaGTGTCCTGCAGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: PNSRPSCRAAVVACSMDLSPGRS*CPAGPA
Trigger: AGCTGGTCCTGCAGGACACCACGATCTCCCGGGGCT...CAGGTCCATGCTGCAGGCCACTACGGCTGCTCGGCAGGAGGGCCGAGAGTTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp CGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCACAGTGTTCCAGCTCAGGGGGCCTaGGCCTCCGATCCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: RSHRHGSPRRRGPSFHSVPAQGA*ASDPSG
Trigger: ACCAGAGGGATCGGAGGCTCAGGCCCCCTGAGCTGG...AACACTGTGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp GTCCTGGCTCCCCTCCCCGTCCCTCCCTACATGATCAGGTCCTCTCAGCTGTCTGCAGCCGTAGTGGCCTaGAGCATGGACCTGTGCCCG +
Preference number: 4 (lower is better)
Translates to: VLAPLPVPPYMIRSSQLSAAVVA*SMDLCP
Trigger: CGGGCACAGGTCCATGCTGCAGGCCACTACGGCTGC...AGACAGCTGAGAGGACCTGATCATGTAGGGAGGGACGGGGAGGGGAGCCAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp CCTCAGAGTATCACGGGTGGGTCTCTGTCTAGGGTGGCCATGGGAGAGGGCAGCAACTCTCGGCCCTCCTaGCGAGCAGCCGTAGTGGCC +
Preference number: 4 (lower is better)
Translates to: PQSITGGSLSRVAMGEGSNSRPS*RAAVVA
Trigger: GGCCACTACGGCTGCTCGGCAGGAGGGCCGAGAGTT...GCTGCCCTCTCCCATGGCCACCCTAGACAGAGACCCACCCGTGATACTCTGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp CCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCACAGTGTCCGCCCCTCCTGTGCTaGTGGGCCCCACTGCTGATT +
Preference number: 4 (lower is better)
Translates to: PLPQTRVPTEKRPFFPQCPPLLC*WAPLLI
Trigger: AATCAGCAGTGGGGCCCAGCAGCACAGGAGGGGCGG...ACACTGTGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CTGTGCCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCACGGCCCAGCAGGATGTaGATGCTCCTGGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LCPLPQTRVPTEKRPFFPRPSRM*MLLEQQ
Trigger: CTGCTGCTCCAGGAGCATCCACATCCTGCTGGGCCG...TGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp TGCCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCACAGACCCTGGAAGGCCGGTaGGCCCTGATGTTCATGCGG +
Preference number: 4 (lower is better)
Translates to: CPLPQTRVPTEKRPFFPQTLEGR*ALMFMR
Trigger: CCGCATGAACATCAGGGCCCACCGGCCTTCCAGGGT...CTGTGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp CCAAACTCTCGGCCCTCCTGCCGAGCAGCCGTAGTGGCCTGCAGCATGGACCTGCAGCCAGGATGCAGGTaGGTAAGACAGCACCTCCTC +
Preference number: 4 (lower is better)
Translates to: PNSRPSCRAAVVACSMDLQPGCR*VRQHLL
Trigger: GAGGAGGTGCTGTCTTACTCACCTGCATCCTGGCTG...CAGGTCCATGCTGCAGGCCACTACGGCTGCTCGGCAGGAGGGCCGAGAGTTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR GCA 90 bp GGGTCCAAACTCTCGGCCCTCCTGCCGAGCAGCCGTAGTGGCCTGCAGCATGGAGCTTCCGCTGTCACTTaGACTCCTCCTCCAGATCCG +
Preference number: 4 (lower is better)
Translates to: GSKLSALLPSSRSGLQHGASAVT*TPPPDP
Trigger: CGGATCTGGAGGAGGAGTGCAAGTGACAGCGGAAGC...TCCATGCTGCAGGCCACTACGGCTGCTCGGCAGGAGGGCCGAGAGTTTGGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR GCA 90 bp CGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCACAGTGTTAACTCTCGGCCCTCCTaGCGAGCAGCCGTAGTGGCC +
Preference number: 4 (lower is better)
Translates to: RSHRHGSPRRRGPSFHSVNSRPS*RAAVVA
Trigger: GGCCACTACGGCTGCTCGGCAGGAGGGCCGAGAGTT...AACACTGTGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp AGCATGGACCTGTGCCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTGGTCTGGTCTGGTCTaGTCTGGTCACTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: SMDLCPLPQTRVPTEKRPWSGLV*SGHSST
Trigger: TGTGGAGGAGTGACCAGACCAGACCAGACCAGACCA...GGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCACAGGTCCATGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp ACCCACCCTGCACTCCCTGCAGGCTTCAAGCCTAGGGCCACGGCTCAGCTTCCCCCGATCCCTCTGGTCTaGTCTGGTCTGGTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: THPALPAGFKPRATAQLPPIPLV*SGLVWS
Trigger: TGACCAGACCAGACCAGACCAGACCAGAGGGATCGG...GGGAAGCTGAGCCGTGGCCCTAGGCTTGAAGCCTGCAGGGAGTGCAGGGTGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp GTCCCCAGGGCACACCCACAGGTCCATAGTTGTCACATCACACTGAGACTGCTGGCAGCTCCTGGGTCCTaGCTCCCCTCCCCGTCCCTC +
Preference number: 4 (lower is better)
Translates to: VPRAHPQVHSCHITLRLLAAPGS*LPSPSL
Trigger: GAGGGACGGGGAGGGGAGCCAGGACCCAGGAGCTGC...CAGCAGTCTCAGTGTGATGTGACAACTATGGACCTGTGGGTGTGCCCTGGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp CTGTGCTGCTGGGCCCCACTGCTGATTATGGGCCAGCTTGGGTTGCAGCTATGTGGATGGCCAGCAGGTTaGGGAGCAGGCCCAGGACGA +
Preference number: 4 (lower is better)
Translates to: LCCWAPLLIMGQLGLQLCGWPAG*GAGPGR
Trigger: TCGTCCTGGGCCTGCTCCTCAACCTGCTGGCCATCC...ACATAGCTGCAACCCAAGCTGGCCCATAATCAGCAGTGGGGCCCAGCAGCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp AGCATGGACCTGTGCCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCCCAGGACCCAGATGGTaGAGCAGATCCCAAAGATCT +
Preference number: 4 (lower is better)
Translates to: SMDLCPLPQTRVPTEKRPPGPRW*SRSQRS
Trigger: AGATCTTTGGGATCTGCTGCACCATCTGGGTCCTGG...GGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCACAGGTCCATGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp GATTATGGGCCAGCTTGGGTTGCAGCTATGTGGGTCCAAACTCTCGGCCCTCCTGGGCAGTGCCACGGGTaGCAGCTGCCCAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: DYGPAWVAAMWVQTLGPPGQCHG*QLPSQD
Trigger: ATCCTGGCTGGGCAGCTGGCACCCGTGGCACTGCCC...AGGAGGGCCGAGAGTTTGGACCCACATAGCTGCAACCCAAGCTGGCCCATAATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR GCA 90 bp GCCCCTCCTGTGCTGCTGGGCCCCACTGCTGATTATGGGCCAGCTTGGGTTGCAAAGGCCACACCCTTGTaGCTAGCTGCCTCATCTCCC +
Preference number: 4 (lower is better)
Translates to: APPVLLGPTADYGPAWVAKATPL*LAASSP
Trigger: GGGAGATGAGGCAGCTAGGCACAAGGGTGTGGCCTT...TGCAACCCAAGCTGGCCCATAATCAGCAGTGGGGCCCAGCAGCACAGGAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR GCA 90 bp GATGGGTCAGGGGTCCCCAGGGCACACCCACAGGTCCATAGTTGTCACATCACACCGCCCCTCCTGTGCTaGTGGGCCCCACTGCTGATT +
Preference number: 4 (lower is better)
Translates to: DGSGVPRAHPQVHSCHITPPLLC*WAPLLI
Trigger: AATCAGCAGTGGGGCCCAGCAGCACAGGAGGGGCGG...TGTGATGTGACAACTATGGACCTGTGGGTGTGCCCTGGGGACCCCTGACCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp ACCCACCCTGCACTCCCTGCAGGCTTCAAGCCTAGGGCCACGGCTCAGCTTCCCAAGGTGCTGAAGCCATaGATGGCCAGCAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: THPALPAGFKPRATAQLPKVLKP*MASRLR
Trigger: CCTCAACCTGCTGGCCATCCATGGCTTCAGCACCTT...GGGAAGCTGAGCCGTGGCCCTAGGCTTGAAGCCTGCAGGGAGTGCAGGGTGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp AGCATGGACCTGTGCCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCACACCAGGACCCAGATaGTGCAGCAGATCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: SMDLCPLPQTRVPTEKRPTPGPR*CSRSQR
Trigger: TCTTTGGGATCTGCTGCACCATCTGGGTCCTGGTGT...GGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCACAGGTCCATGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGACCCAGTCCTGGGTGTaGTCTCGGCGGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PWNAISVTRIQGQGFLPLTQSWV*SRRPSR
Trigger: CCTGCTGGGCCGCCGAGACCACACCCAGGACTGGGT...CAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GATTATGGGCCAGCTTGGGTTGCAGCTATGTGGGTCCAAACTCTCGGCCCTCCTACCCAGTCCTGGGTGTaGTCTCGGCGGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: DYGPAWVAAMWVQTLGPPTQSWV*SRRPSR
Trigger: CCTGCTGGGCCGCCGAGACCACACCCAGGACTGGGT...AGGAGGGCCGAGAGTTTGGACCCACATAGCTGCAACCCAAGCTGGCCCATAATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CACATGACGGGCATCACTCAACTCCACCAGGCAGGCTCCCAACTCCTCGTGCAGACCCTGGAAGGCCGGTaGGCCCTGATGTTCATGCGG +
Preference number: 4 (lower is better)
Translates to: HMTGITQLHQAGSQLLVQTLEGR*ALMFMR
Trigger: CCGCATGAACATCAGGGCCCACCGGCCTTCCAGGGT...CTGCACGAGGAGTTGGGAGCCTGCCTGGTGGAGTTGAGTGATGCCCGTCATGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GAGGCTCACTGGAAACTTGGGGTGATCCATGCTACTTGCCCAGCCCCAACACCAGGAGGGACGGCTCCATaGGCAGTGCCACGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: EAHWKLGVIHATCPAPTPGGTAP*AVPRVP
Trigger: TGGCACCCGTGGCACTGCCCATGGAGCCGTCCCTCC...TGGTGTTGGGGCTGGGCAAGTAGCATGGATCACCCCAAGTTTCCAGTGAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp ACCCACCCTGCACTCCCTGCAGGCTTCAAGCCTAGGGCCACGGCTCAGCTTCCCGAGCAGCTGAGTCATTaGGAGGCTTCCGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: THPALPAGFKPRATAQLPEQLSH*EASAVT
Trigger: AGTGACAGCGGAAGCCTCCCAATGACTCAGCTGCTC...GGGAAGCTGAGCCGTGGCCCTAGGCTTGAAGCCTGCAGGGAGTGCAGGGTGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp GGGTCCAAACTCTCGGCCCTCCTGCCGAGCAGCCGTAGTGGCCTGCAGCATGGACAGAGCCTGACTCTGTaGCTGTGGTTCTTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: GSKLSALLPSSRSGLQHGQSLTL*LWFLEA
Trigger: GGCCTCTAAGAACCACAGCCACAGAGTCAGGCTCTG...TCCATGCTGCAGGCCACTACGGCTGCTCGGCAGGAGGGCCGAGAGTTTGGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp AGCATGGACCTGTGCCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCGCTGGGGATGATAGTTaGTTAGGTCCACCCACCCTT +
Preference number: 4 (lower is better)
Translates to: SMDLCPLPQTRVPTEKRPAGDDS*LGPPTL
Trigger: AAGGGTGGGTGGACCTAACCAACTATCATCCCCAGC...GGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCACAGGTCCATGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp CCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCACAGTGAGACCCAAGTGCACATaGCGGGCATCACTCAACTCC +
Preference number: 4 (lower is better)
Translates to: PAPTDTGPHGEEALLSTVRPKCT*RASLNS
Trigger: GGAGTTGAGTGATGCCCGTCATGTGCACTTGGGTCT...CACTGTGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp ATGCAGGTGAGTAAGACAGCACCTCCTCCACCCTCCTATGGTGGAACCAAGGCAGGCACTCCACCAGGGTaGACAGGGACGGGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: MQVSKTAPPPPSYGGTKAGTPPG*TGTGRG
Trigger: CCCCCTTCCCGTCCCTGTGCACCCTGGTGGAGTGCC...TGCCTTGGTTCCACCATAGGAGGGTGGAGGAGGTGCTGTCTTACTCACCTGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp GCCCCTCCTGTGCTGCTGGGCCCCACTGCTGATTATGGGCCAGCTTGGGTTGCAGCGGGAAGAAGACCTTaGCGCTCCAGGTATCATCAG +
Preference number: 4 (lower is better)
Translates to: APPVLLGPTADYGPAWVAAGRRP*RSRYHQ
Trigger: CTGATGATACCTGGAGCGCCAAGGTCTTCTTCCCGC...TGCAACCCAAGCTGGCCCATAATCAGCAGTGGGGCCCAGCAGCACAGGAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CCTCAGAGTATCACGGGTGGGTCTCTGTCTAGGGTGGCCATGGGAGAGGGCAGCCGAAGACAGCCAGGCTaGCTGCGATGCTGTAGATGC +
Preference number: 4 (lower is better)
Translates to: PQSITGGSLSRVAMGEGSRRQPG*LRCCRC
Trigger: GCATCTACAGCATCGCAGCCAGCCTGGCTGTCTTCG...GCTGCCCTCTCCCATGGCCACCCTAGACAGAGACCCACCCGTGATACTCTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CAAGTGCACATGACGGGCATCACTCAACTCCACCAGGCAGGCTCCCAACTCCTCAGCCCCGGGAGATCGTaGTGTCCTGCAGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: QVHMTGITQLHQAGSQLLSPGRS*CPAGPA
Trigger: AGCTGGTCCTGCAGGACACCACGATCTCCCGGGGCT...GAGGAGTTGGGAGCCTGCCTGGTGGAGTTGAGTGATGCCCGTCATGTGCACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GCCCCTCCTGTGCTGCTGGGCCCCACTGCTGATTATGGGCCAGCTTGGGTTGCATGGTCTGGTCTGGTCTaGTCTGGTCACTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: APPVLLGPTADYGPAWVAWSGLV*SGHSST
Trigger: TGTGGAGGAGTGACCAGACCAGACCAGACCAGACCA...TGCAACCCAAGCTGGCCCATAATCAGCAGTGGGGCCCAGCAGCACAGGAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CCTGTGCCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCGCTGGGGATGATAGTTaGTTAGGTCCACCCACCCTT +
Preference number: 4 (lower is better)
Translates to: PVPAPTDTGPHGEEALLSAGDDS*LGPPTL
Trigger: AAGGGTGGGTGGACCTAACCAACTATCATCCCCAGC...GGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGCAGCTCCTGGGTCCTaGCTCCCCTCCCCGTCCCTC +
Preference number: 4 (lower is better)
Translates to: PTTSKPWNAISVTRIQGQAAPGS*LPSPSL
Trigger: GAGGGACGGGGAGGGGAGCCAGGACCCAGGAGCTGC...CTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCACAGTGCTTTCCACAGTGTTTTaGGATGGGTCAGGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: PAPTDTGPHGEEALLSTVLSTVF*DGSGVP
Trigger: GGGGACCCCTGACCCATCCCAAAACACTGTGGAAAG...CACTGTGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CTGTGCCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCATGGGTTGCAGCTATGTaGGTCCAAACTCTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: LCPLPQTRVPTEKRPFFPWVAAM*VQTLGP
Trigger: AGGGCCGAGAGTTTGGACCCACATAGCTGCAACCCA...TGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CACATGACGGGCATCACTCAACTCCACCAGGCAGGCTCCCAACTCCTCGTGCAGCCCCTCCTGTGCTGCTaGGCCCCACTGCTGATTATG +
Preference number: 4 (lower is better)
Translates to: HMTGITQLHQAGSQLLVQPLLCC*APLLIM
Trigger: CATAATCAGCAGTGGGGCCCAGCAGCACAGGAGGGG...CTGCACGAGGAGTTGGGAGCCTGCCTGGTGGAGTTGAGTGATGCCCGTCATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR CAA 72 bp TGCTGGGCCCCACTGCTGATTATGGGCCAGCTTGGGTaGCAGCTATGTGGGTCCAAACTCTCGGCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: CWAPLLIMGQLG*QLCGSKLSALL
Trigger: CAGGAGGGCCGAGAGTTTGGACCCACATAGCTGCAACCCAAGCTGGCCCATAATCAGCAGTGGGGCCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp AGTCATTGGGAGGCTTCCGCTGTCACTTGCACTCCTCCTCCAGATCCGTTGAGAGGATGGCCAGCAGGTTaGGGAGCAGGCCCAGGACGA +
Preference number: 4 (lower is better)
Translates to: SHWEASAVTCTPPPDPLRGWPAG*GAGPGR
Trigger: TCGTCCTGGGCCTGCTCCTCAACCTGCTGGCCATCC...TCTCAACGGATCTGGAGGAGGAGTGCAAGTGACAGCGGAAGCCTCCCAATGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR TCA 90 bp CACATGACGGGCATCACTCAACTCCACCAGGCAGGCTCCCAACTCCTCGTGCAGGGGACAGGACCATCTTaGATGGGAGGGAGAGCACCA +
Preference number: 4 (lower is better)
Translates to: HMTGITQLHQAGSQLLVQGTGPS*MGGRAP
Trigger: TGGTGCTCTCCCTCCCATTCAAGATGGTCCTGTCCC...CTGCACGAGGAGTTGGGAGCCTGCCTGGTGGAGTTGAGTGATGCCCGTCATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp AGCCGTAGTGGCCTGCAGCATGGACCTGTGCCCGCTCCCACAGACACGGGTCCCGAACCAAGGCAGGCCTaGTTCTTTGCCATTGTTTTC +
Preference number: 4 (lower is better)
Translates to: SRSGLQHGPVPAPTDTGPEPRQA*FFAIVF
Trigger: GAAAACAATGGCAAAGAATCAGGCCTGCCTTGGTTC...GGGACCCGTGTCTGTGGGAGCGGGCACAGGTCCATGCTGCAGGCCACTACGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR TCA 90 bp GTCCTGGCTCCCCTCCCCGTCCCTCCCTACATGATCAGGTCCTCTCAGCTGTCTATGCCCCGTTGCATGTaGAAGTCTGGCTCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: VLAPLPVPPYMIRSSQLSMPRCM*KSGSLR
Trigger: TCTGAGGGAGCCAGACTTTCACATGCAACGGGGCAT...AGACAGCTGAGAGGACCTGATCATGTAGGGAGGGACGGGGAGGGGAGCCAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp GTCCCCAGGGCACACCCACAGGTCCATAGTTGTCACATCACACTGAGACTGCTGGCTGGGCCCCACTGCTaGTTATGGGCCAGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: VPRAHPQVHSCHITLRLLAGPHC*LWASLG
Trigger: ACCCAAGCTGGCCCATAATCAGCAGTGGGGCCCAGC...CAGCAGTCTCAGTGTGATGTGACAACTATGGACCTGTGGGTGTGCCCTGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp AAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCGGCACTCCACCAGGGTaGACAGGGACGGGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: KPWNAISVTRIQGQGFLPGTPPG*TGTGRG
Trigger: CCCCCTTCCCGTCCCTGTGCACCCTGGTGGAGTGCC...GGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp CCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCACTCCACCAGGGTaGACAGGGACGGGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: PTTSKPWNAISVTRIQGQGTPPG*TGTGRG
Trigger: CCCCCTTCCCGTCCCTGTGCACCCTGGTGGAGTGCC...CTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp CCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCACAGTGCCAGGACCCAGATGGTaGAGCAGATCCCAAAGATCT +
Preference number: 4 (lower is better)
Translates to: PAPTDTGPHGEEALLSTVPGPRW*SRSQRS
Trigger: AGATCTTTGGGATCTGCTGCACCATCTGGGTCCTGG...CACTGTGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp CCTCAGAGTATCACGGGTGGGTCTCTGTCTAGGGTGGCCATGGGAGAGGGCAGCCCAGGCTGGCTGCGATaGTGTAGATGCAGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: PQSITGGSLSRVAMGEGSPGWLR*CRCRLS
Trigger: AGAAAGCCTGCATCTACAGCATCGCAGCCAGCCTGG...GCTGCCCTCTCCCATGGCCACCCTAGACAGAGACCCACCCGTGATACTCTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp CTGTGCTGCTGGGCCCCACTGCTGATTATGGGCCAGCTTGGGTTGCAGCTATGTGAGATCGTGGTGTCCTaGAGGACCAGCTGGACCCTG +
Preference number: 4 (lower is better)
Translates to: LCCWAPLLIMGQLGLQLCEIVVS*RTSWTL
Trigger: CAGGGTCCAGCTGGTCCTGCAGGACACCACGATCTC...ACATAGCTGCAACCCAAGCTGGCCCATAATCAGCAGTGGGGCCCAGCAGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp AGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCGGCTCCATGGGCAGTaGCACGGGTGCCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: RWCGSSHHIKTLERDIRYRLHGQ*HGCQLP
Trigger: GGGCAGCTGGCACCCGTGGCACTGCCCATGGAGCCG...GTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR GCA 90 bp CCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCACAGTGTTGGGCCAGCTTGGGTTaGAGCTATGTGGGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: PLPQTRVPTEKRPFFPQCWASLG*SYVGPN
Trigger: GTTTGGACCCACATAGCTGCAACCCAAGCTGGCCCA...ACACTGTGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp ATCACACTGAGACTGCTGATACCCTCCAAGGACCTTCCTCTTACAGCCATGCAGCGTCCGCCCCTCCTGTaGTGCTGGGCCCCACTGCTG +
Preference number: 4 (lower is better)
Translates to: ITLRLLIPSKDLPLTAMQRPPLL*CWAPLL
Trigger: CAGCAGTGGGGCCCAGCAGCACAGGAGGGGCGGACG...CTGCATGGCTGTAAGAGGAAGGTCCTTGGAGGGTATCAGCAGTCTCAGTGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp AAAGCTGGCACTCAATGGGCATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGCGTCCGCCCCTCCTGTaGTGCTGGGCCCCACTGCTG +
Preference number: 4 (lower is better)
Translates to: KAGTQWASKGSTSVKMVRRPPLL*CWAPLL
Trigger: CAGCAGTGGGGCCCAGCAGCACAGGAGGGGCGGACG...CCGCACCATCTTCACTGATGTGCTTCCCTTTGATGCCCATTGAGTGCCAGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp GGAAGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGACGTCCGCCCCTCCTGTaGTGCTGGGCCCCACTGCTG +
Preference number: 4 (lower is better)
Translates to: GSTSVKMVRIIPPHQNPGRPPLL*CWAPLL
Trigger: CAGCAGTGGGGCCCAGCAGCACAGGAGGGGCGGACG...TCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp ACCCACCCTGCACTCCCTGCAGGCTTCAAGCCTAGGGCCACGGCTCAGCTTCCCAAGGGGGACTGTACCTaGGACAGGACCATCTTGAAT +
Preference number: 4 (lower is better)
Translates to: THPALPAGFKPRATAQLPKGDCT*DRTILN
Trigger: ATTCAAGATGGTCCTGTCCCAGGTACAGTCCCCCTT...GGGAAGCTGAGCCGTGGCCCTAGGCTTGAAGCCTGCAGGGAGTGCAGGGTGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp GTCCCCAGGGCACACCCACAGGTCCATAGTTGTCACATCACACTGAGACTGCTGAGCCCCGGGAGATCGTaGTGTCCTGCAGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: VPRAHPQVHSCHITLRLLSPGRS*CPAGPA
Trigger: AGCTGGTCCTGCAGGACACCACGATCTCCCGGGGCT...CAGCAGTCTCAGTGTGATGTGACAACTATGGACCTGTGGGTGTGCCCTGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GAAGCCCATCTGGCCTTAAGCACATTGGTAGACCCAAGTGCACATGACGGGCATGGAGGGACGGCTCCATaGGCAGTGCCACGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: EAHLALSTLVDPSAHDGHGGTAP*AVPRVP
Trigger: TGGCACCCGTGGCACTGCCCATGGAGCCGTCCCTCC...ATGCCCGTCATGTGCACTTGGGTCTACCAATGTGCTTAAGGCCAGATGGGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp CCTCAGAGTATCACGGGTGGGTCTCTGTCTAGGGTGGCCATGGGAGAGGGCAGCTGGTCTGGTCTGGTCTaGTCACTCCTCCACATCCAC +
Preference number: 4 (lower is better)
Translates to: PQSITGGSLSRVAMGEGSWSGLV*SLLHIH
Trigger: GTGGATGTGGAGGAGTGACCAGACCAGACCAGACCA...GCTGCCCTCTCCCATGGCCACCCTAGACAGAGACCCACCCGTGATACTCTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCACAGTGTTCCGATCCCTCTGGTCTaGTCTGGTCTGGTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: RSHRHGSPRRRGPSFHSVPIPLV*SGLVWS
Trigger: TGACCAGACCAGACCAGACCAGACCAGAGGGATCGG...AACACTGTGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp AGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGCAGCTCCTGGGTCCTaGCTCCCCTCCCCGTCCCTC +
Preference number: 4 (lower is better)
Translates to: SEDGADHPTTSKPWNAISAAPGS*LPSPSL
Trigger: GAGGGACGGGGAGGGGAGCCAGGACCCAGGAGCTGC...GGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CTGTGCCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCAGATTATGGGCCAGCTTaGGTTGCAGCTATGTGGGTC +
Preference number: 4 (lower is better)
Translates to: LCPLPQTRVPTEKRPFFPDYGPA*VAAMWV
Trigger: GACCCACATAGCTGCAACCCAAGCTGGCCCATAATC...TGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp CCTGTGCCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCTTTTCATCAGCTCGTTaGCACCGTCAAACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: PVPAPTDTGPHGEEALLSFSSAR*HRQTGS
Trigger: ACTGCCTGTTTGACGGTGTCAACGAGCTGATGAAAA...GGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp CAAGTGCACATGACGGGCATCACTCAACTCCACCAGGCAGGCTCCCAACTCCTCAGCAGCAGAAGCCCATaGTGCCCATGGGAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: QVHMTGITQLHQAGSQLLSSRSP*CPWEGG
Trigger: TCCTCCTTCCCATGGGCATCATGGGCTTCTGCTGCT...GAGGAGTTGGGAGCCTGCCTGGTGGAGTTGAGTGATGCCCGTCATGTGCACTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp GGGTCCAAACTCTCGGCCCTCCTGCCGAGCAGCCGTAGTGGCCTGCAGCATGGATTCTTCAGAGATCCCTaGACACTGGGTGGTATAAGC +
Preference number: 4 (lower is better)
Translates to: GSKLSALLPSSRSGLQHGFFRDP*TLGGIS
Trigger: GCTTATACCACCCAGTGTTCAGGGATCTCTGAAGAA...TCCATGCTGCAGGCCACTACGGCTGCTCGGCAGGAGGGCCGAGAGTTTGGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp CCTGTGCCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCTTCTTCAGAGATCCCTaGACACTGGGTGGTATAAGC +
Preference number: 4 (lower is better)
Translates to: PVPAPTDTGPHGEEALLSFFRDP*TLGGIS
Trigger: GCTTATACCACCCAGTGTTCAGGGATCTCTGAAGAA...GGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp ATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGAACAGGATGTCCTTCCAGCTCAGGGGGCCTaGGCCTCCGATCCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: IRYQNSGPGLSSPEQDVLPAQGA*ASDPSG
Trigger: ACCAGAGGGATCGGAGGCTCAGGCCCCCTGAGCTGG...AAGGACATCCTGTTCAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp GATTATGGGCCAGCTTGGGTTGCAGCTATGTGGGTCCAAACTCTCGGCCCTCCTGTTCCCCACCCACCCTaGACTCCCTGCAGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: DYGPAWVAAMWVQTLGPPVPHPP*TPCRLQ
Trigger: TTGAAGCCTGCAGGGAGTGCAGGGTGGGTGGGGAAC...AGGAGGGCCGAGAGTTTGGACCCACATAGCTGCAACCCAAGCTGGCCCATAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR GCA 90 bp AAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCGCAGCCGTAGTGGCCTaGAGCATGGACCTGTGCCCG +
Preference number: 4 (lower is better)
Translates to: KPWNAISVTRIQGQGFLPAAVVA*SMDLCP
Trigger: CGGGCACAGGTCCATGCTGCAGGCCACTACGGCTGC...GGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp GCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGAACAGGATGAACTCTCGGCCCTCCTaGCGAGCAGCCGTAGTGGCC +
Preference number: 4 (lower is better)
Translates to: AISVTRIQGQGFLPLNRMNSRPS*RAAVVA
Trigger: GGCCACTACGGCTGCTCGGCAGGAGGGCCGAGAGTT...CATCCTGTTCAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp GATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAACTCTCGGCCCTCCTaGCGAGCAGCCGTAGTGGCC +
Preference number: 4 (lower is better)
Translates to: DGADHPTTSKPWNAISVTNSRPS*RAAVVA
Trigger: GGCCACTACGGCTGCTCGGCAGGAGGGCCGAGAGTT...GGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp ACACTGAGACTGCTGATACCCTCCAAGGACCTTCCTCTTACAGCCATGCAGCTCCCGCCCCTCCTGTGCTaGTGGGCCCCACTGCTGATT +
Preference number: 4 (lower is better)
Translates to: TLRLLIPSKDLPLTAMQLPPLLC*WAPLLI
Trigger: AATCAGCAGTGGGGCCCAGCAGCACAGGAGGGGCGG...GAGCTGCATGGCTGTAAGAGGAAGGTCCTTGGAGGGTATCAGCAGTCTCAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp CTCCCAACTCCTCGTGCAGAGAAAGAAGTGGGAGGAGGGTGGTCACTAAATCCACCGCCCCTCCTGTGCTaGTGGGCCCCACTGCTGATT +
Preference number: 4 (lower is better)
Translates to: LPTPRAEKEVGGGWSLNPPPLLC*WAPLLI
Trigger: AATCAGCAGTGGGGCCCAGCAGCACAGGAGGGGCGG...TGGATTTAGTGACCACCCTCCTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CTGTGCCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCAACAGGCAGTCCCCACTaGTGTTTTGCTGACTCATGT +
Preference number: 4 (lower is better)
Translates to: LCPLPQTRVPTEKRPFFPTGSPH*CFADSC
Trigger: ACATGAGTCAGCAAAACACCAGTGGGGACTGCCTGT...TGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp ACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGAACCCAGTCCTGGGTGTaGTCTCGGCGGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TSVKMVRIIPPHQNPGTRTQSWV*SRRPSR
Trigger: CCTGCTGGGCCGCCGAGACCACACCCAGGACTGGGT...TCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CCTGTGCCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCACCACATCAAAACCCTaGAACGCGATATCCGTTACC +
Preference number: 4 (lower is better)
Translates to: PVPAPTDTGPHGEEALLSTTSKP*NAISVT
Trigger: GGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGT...GGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CCTCAGAGTATCACGGGTGGGTCTCTGTCTAGGGTGGCCATGGGAGAGGGCAGCAATCACAACTGTTGGTaGTCCGGTGCAGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: PQSITGGSLSRVAMGEGSNHNCW*SGAAER
Trigger: CCTCTCAGCTGCACCGGACCACCAACAGTTGTGATT...GCTGCCCTCTCCCATGGCCACCCTAGACAGAGACCCACCCGTGATACTCTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CTGTGCCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCATTGAATCACAACTGTTaGTGGTCCGGTGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LCPLPQTRVPTEKRPFFPLNHNC*WSGAAE
Trigger: CTCAGCTGCACCGGACCACCAACAGTTGTGATTCAA...TGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GGGTCCAAACTCTCGGCCCTCCTGCCGAGCAGCCGTAGTGGCCTGCAGCATGGAAAAGCTGGCACTCAATaGGCATCAAAGGGAAGCACA +
Preference number: 4 (lower is better)
Translates to: GSKLSALLPSSRSGLQHGKAGTQ*ASKGST
Trigger: TGTGCTTCCCTTTGATGCCCATTGAGTGCCAGCTTT...TCCATGCTGCAGGCCACTACGGCTGCTCGGCAGGAGGGCCGAGAGTTTGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CAAGTGCACATGACGGGCATCACTCAACTCCACCAGGCAGGCTCCCAACTCCTCTCCTCCACCCTCCTATaGTGGAACCAAGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: QVHMTGITQLHQAGSQLLSSTLL*WNQGRP
Trigger: AGGCCTGCCTTGGTTCCACCATAGGAGGGTGGAGGA...GAGGAGTTGGGAGCCTGCCTGGTGGAGTTGAGTGATGCCCGTCATGTGCACTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp CAAGTGCACATGACGGGCATCACTCAACTCCACCAGGCAGGCTCCCAACTCCTCACTCCTGTCCGTCCATaGCTCTTAGGCCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: QVHMTGITQLHQAGSQLLTPVRP*LLGQLG
Trigger: TCCCAGCTGGCCTAAGAGCCATGGACGGACAGGAGT...GAGGAGTTGGGAGCCTGCCTGGTGGAGTTGAGTGATGCCCGTCATGTGCACTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp CCTCAGAGTATCACGGGTGGGTCTCTGTCTAGGGTGGCCATGGGAGAGGGCAGCGCTGGGGATGATAGTTaGTTAGGTCCACCCACCCTT +
Preference number: 4 (lower is better)
Translates to: PQSITGGSLSRVAMGEGSAGDDS*LGPPTL
Trigger: AAGGGTGGGTGGACCTAACCAACTATCATCCCCAGC...GCTGCCCTCTCCCATGGCCACCCTAGACAGAGACCCACCCGTGATACTCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CTCCACATCCACTTCCACCCCTTCATTGACGCTCTCTTCCTCACCCTTCCCTCCCCCCTCCTGTGCTGCTaGGCCCCACTGCTGATTATG +
Preference number: 4 (lower is better)
Translates to: LHIHFHPFIDALFLTLPSPLLCC*APLLIM
Trigger: CATAATCAGCAGTGGGGCCCAGCAGCACAGGAGGGG...GGAGGGAAGGGTGAGGAAGAGAGCGTCAATGAAGGGGTGGAAGTGGATGTGGAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp TGCCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCACAGTTTTCATCAGCTCGTTaGCACCGTCAAACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: CPLPQTRVPTEKRPFFPQFSSAR*HRQTGS
Trigger: ACTGCCTGTTTGACGGTGTCAACGAGCTGATGAAAA...CTGTGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp CACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTGGATGGCCAGCAGGTTaGGGAGCAGGCCCAGGACGA +
Preference number: 4 (lower is better)
Translates to: HIKTLERDIRYQNSGPGLGWPAG*GAGPGR
Trigger: TCGTCCTGGGCCTGCTCCTCAACCTGCTGGCCATCC...AAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp ACTCAACTCCACCAGGCAGGCTCCCAACTCCTCGTGCAGAGAAAGAAGTGGGAGGGGACAGGACCATCTTaGATGGGAGGGAGAGCACCA +
Preference number: 4 (lower is better)
Translates to: TQLHQAGSQLLVQRKKWEGTGPS*MGGRAP
Trigger: TGGTGCTCTCCCTCCCATTCAAGATGGTCCTGTCCC...CTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAGCCTGCCTGGTGGAGTTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp GGAGGAGGGTGGTCACTAAATCCACCACCCGTAGACACTGACCCGAACCAGCCCAGGGAAGCACATCAGTaGAGATGGTGCGGATCATCC +
Preference number: 4 (lower is better)
Translates to: GGGWSLNPPPVDTDPNQPREAHQ*RWCGSS
Trigger: GGATGATCCGCACCATCTTCACTGATGTGCTTCCCT...GGGCTGGTTCGGGTCAGTGTCTACGGGTGGTGGATTTAGTGACCACCCTCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp AAGGCGACTCCTGTCCGTCCATGGCTCTTAGGCCAGCTGGGAAAGCTCTCAGGCAGGGAAGCACATCAGTaGAGATGGTGCGGATCATCC +
Preference number: 4 (lower is better)
Translates to: KATPVRPWLLGQLGKLSGREAHQ*RWCGSS
Trigger: GGATGATCCGCACCATCTTCACTGATGTGCTTCCCT...GCCTGAGAGCTTTCCCAGCTGGCCTAAGAGCCATGGACGGACAGGAGTCGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR TCA 90 bp CCAAACTCTCGGCCCTCCTGCCGAGCAGCCGTAGTGGCCTGCAGCATGGACCTGGCAATTCATGCCCATTaGATCACAACTGTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: PNSRPSCRAAVVACSMDLAIHAH*ITTVGG
Trigger: ACCACCAACAGTTGTGATTCAATGGGCATGAATTGC...CAGGTCCATGCTGCAGGCCACTACGGCTGCTCGGCAGGAGGGCCGAGAGTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp AGCATGGACCTGTGCCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTGGAAACAGCCTTGTTaGCATGGTCTCATTCTCTTT +
Preference number: 4 (lower is better)
Translates to: SMDLCPLPQTRVPTEKRPWKQPC*HGLILF
Trigger: AAAGAGAATGAGACCATGTCAACAAGGCTGTTTCCA...GGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCACAGGTCCATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp ATCACACTGAGACTGCTGATACCCTCCAAGGACCTTCCTCTTACAGCCATGCAGAGCGGGAGCTGCTCCTaGGAAGGCGACTCCTGTCCG +
Preference number: 4 (lower is better)
Translates to: ITLRLLIPSKDLPLTAMQSGSCS*EGDSCP
Trigger: CGGACAGGAGTCGCCTTCTCAGGAGCAGCTCCCGCT...CTGCATGGCTGTAAGAGGAAGGTCCTTGGAGGGTATCAGCAGTCTCAGTGTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR TCA 90 bp CTGTGCTGCTGGGCCCCACTGCTGATTATGGGCCAGCTTGGGTTGCAGCTATGTATGCCCCGTTGCATGTaGAAGTCTGGCTCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: LCCWAPLLIMGQLGLQLCMPRCM*KSGSLR
Trigger: TCTGAGGGAGCCAGACTTTCACATGCAACGGGGCAT...ACATAGCTGCAACCCAAGCTGGCCCATAATCAGCAGTGGGGCCCAGCAGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp CCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGCCGTCCCTCCCTACATaGTCAGGTCCTCTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: PWNAISVTRIQGQGFLPLPSLPT*SGPLSC
Trigger: ACAGCTGAGAGGACCTGATCATGTAGGGAGGGACGG...CAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp CCTGAGAAGGCGACTCCTGTCCGTCCATGGCTCTTAGGCCAGCTGGGAAAGCTCCCCACTCAGTCATTTTaGAGTCTTCTCACGGGCACG +
Preference number: 4 (lower is better)
Translates to: PEKATPVRPWLLGQLGKLPTQSF*SLLTGT
Trigger: CGTGCCCGTGAGAAGACTGCAAAATGACTGAGTGGG...GAGCTTTCCCAGCTGGCCTAAGAGCCATGGACGGACAGGAGTCGCCTTCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR GCA 90 bp CTCCACATCCACTTCCACCCCTTCATTGACGCTCTCTTCCTCACCCTTCCCTCCAAGGCCACACCCTTGTaGCTAGCTGCCTCATCTCCC +
Preference number: 4 (lower is better)
Translates to: LHIHFHPFIDALFLTLPSKATPL*LAASSP
Trigger: GGGAGATGAGGCAGCTAGGCACAAGGGTGTGGCCTT...GGAGGGAAGGGTGAGGAAGAGAGCGTCAATGAAGGGGTGGAAGTGGATGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR GCA 90 bp ATGCAGGTGAGTAAGACAGCACCTCCTCCACCCTCCTATGGTGGAACCAAGGCAGTTCCCCACCCACCCTaGACTCCCTGCAGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: MQVSKTAPPPPSYGGTKAVPHPP*TPCRLQ
Trigger: TTGAAGCCTGCAGGGAGTGCAGGGTGGGTGGGGAAC...TGCCTTGGTTCCACCATAGGAGGGTGGAGGAGGTGCTGTCTTACTCACCTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR GCA 90 bp CAAGTGCACATGACGGGCATCACTCAACTCCACCAGGCAGGCTCCCAACTCCTCGCTCCCAACTCCTCGTaGAGAGAAAGAAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: QVHMTGITQLHQAGSQLLAPNSS*RERSGR
Trigger: CCTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAGC...GAGGAGTTGGGAGCCTGCCTGGTGGAGTTGAGTGATGCCCGTCATGTGCACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCCGGCCCAGCAGGATGTaGATGCTCCTGGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: DGADHPTTSKPWNAISVTRPSRM*MLLEQQ
Trigger: CTGCTGCTCCAGGAGCATCCACATCCTGCTGGGCCG...GGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp TCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGACCCAGTCCTGGGTGTaGTCTCGGCGGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SSHHIKTLERDIRYQNSGTQSWV*SRRPSR
Trigger: CCTGCTGGGCCGCCGAGACCACACCCAGGACTGGGT...CCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp AAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTAACCCAGTCCTGGGTGTaGTCTCGGCGGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: KMVRIIPPHQNPGTRYPLTQSWV*SRRPSR
Trigger: CCTGCTGGGCCGCCGAGACCACACCCAGGACTGGGT...TAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp ACTCAACTCCACCAGGCAGGCTCCCAACTCCTCGTGCAGAGAAAGAAGTGGGAGCGAAGACAGCCAGGCTaGCTGCGATGCTGTAGATGC +
Preference number: 4 (lower is better)
Translates to: TQLHQAGSQLLVQRKKWERRQPG*LRCCRC
Trigger: GCATCTACAGCATCGCAGCCAGCCTGGCTGTCTTCG...CTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAGCCTGCCTGGTGGAGTTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAAGCCCCGGGAGATCGTaGTGTCCTGCAGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: GADHPTTSKPWNAISVTRSPGRS*CPAGPA
Trigger: AGCTGGTCCTGCAGGACACCACGATCTCCCGGGGCT...TCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCACAGTGTTAATCACAACTGTTGGTaGTCCGGTGCAGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: RSHRHGSPRRRGPSFHSVNHNCW*SGAAER
Trigger: CCTCTCAGCTGCACCGGACCACCAACAGTTGTGATT...AACACTGTGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCACAGTGAAAGCTGGCACTCAATaGGCATCAAAGGGAAGCACA +
Preference number: 4 (lower is better)
Translates to: PAPTDTGPHGEEALLSTVKAGTQ*ASKGST
Trigger: TGTGCTTCCCTTTGATGCCCATTGAGTGCCAGCTTT...CACTGTGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CACATGACGGGCATCACTCAACTCCACCAGGCAGGCTCCCAACTCCTCGTGCAGTCCCTGAACACTGGGTaGTATAAGCTGTCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: HMTGITQLHQAGSQLLVQSLNTG*YKLSGQ
Trigger: CTGCCCAGACAGCTTATACCACCCAGTGTTCAGGGA...CTGCACGAGGAGTTGGGAGCCTGCCTGGTGGAGTTGAGTGATGCCCGTCATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGTGTCTCTCTTCACCCTaGGCCAGCACCAACACTCCG +
Preference number: 4 (lower is better)
Translates to: PWNAISVTRIQGQGFLPLCLSSP*ASTNTP
Trigger: CGGAGTGTTGGTGCTGGCCCAGGGTGAAGAGAGACA...CAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp ACTCAACTCCACCAGGCAGGCTCCCAACTCCTCGTGCAGAGAAAGAAGTGGGAGAGCCTCCGATCCCTCTaGTCTGGTCTGGTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: TQLHQAGSQLLVQRKKWESLRSL*SGLVWS
Trigger: AGACCAGACCAGACCAGACCAGAGGGATCGGAGGCT...CTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAGCCTGCCTGGTGGAGTTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GTCCCCAGGGCACACCCACAGGTCCATAGTTGTCACATCACACTGAGACTGCTGAGCCTCCGATCCCTCTaGTCTGGTCTGGTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: VPRAHPQVHSCHITLRLLSLRSL*SGLVWS
Trigger: AGACCAGACCAGACCAGACCAGAGGGATCGGAGGCT...CAGCAGTCTCAGTGTGATGTGACAACTATGGACCTGTGGGTGTGCCCTGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp TGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGAACTGTCTAGGGTGGCCATaGGAGAGGGCAGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: WNAISVTRIQGQGFLPLNCLGWP*ERAACR
Trigger: CCTGCAGGCTGCCCTCTCCCATGGCCACCCTAGACA...GTTCAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GGAGGAGGGTGGTCACTAAATCCACCACCCGTAGACACTGACCCGAACCAGCCCGATTATGGGCCAGCTTaGGTTGCAGCTATGTGGGTC +
Preference number: 4 (lower is better)
Translates to: GGGWSLNPPPVDTDPNQPDYGPA*VAAMWV
Trigger: GACCCACATAGCTGCAACCCAAGCTGGCCCATAATC...GGGCTGGTTCGGGTCAGTGTCTACGGGTGGTGGATTTAGTGACCACCCTCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR CAA 72 bp GGAGCAGCTGAGTCATTGGGAGGCTTCCGCTGTCACTaGCACTCCTCCTCCAGATCCGTTGAGAAGCCATCC +
Preference number: 4 (lower is better)
Translates to: GAAESLGGFRCH*HSSSRSVEKPS
Trigger: GGATGGCTTCTCAACGGATCTGGAGGAGGAGTGCAAGTGACAGCGGAAGCCTCCCAATGACTCAGCTGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR TCA 90 bp AAGGCGACTCCTGTCCGTCCATGGCTCTTAGGCCAGCTGGGAAAGCTCTCAGGCCAAAGACTGCCAGGTTaGTCATGTAGATGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: KATPVRPWLLGQLGKLSGQRLPG*SCRWRW
Trigger: CCACCTCCATCTACATGATCAACCTGGCAGTCTTTG...GCCTGAGAGCTTTCCCAGCTGGCCTAAGAGCCATGGACGGACAGGAGTCGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR TCA 90 bp CCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGAAGGCCGGTGGGCCCTaGTGTTCATGCGGAATTCTT +
Preference number: 4 (lower is better)
Translates to: PWNAISVTRIQGQGFLPLKAGGP*CSCGIL
Trigger: AAGAATTCCGCATGAACATCAGGGCCCACCGGCCTT...CAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp CACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTGCTGGGCCCCACTGCTaGTTATGGGCCAGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: HIKTLERDIRYQNSGPGLAGPHC*LWASLG
Trigger: ACCCAAGCTGGCCCATAATCAGCAGTGGGGCCCAGC...AAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp TCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACGGCACTCCACCAGGGTaGACAGGGACGGGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: SKGSTSVKMVRIIPPHQNGTPPG*TGTGRG
Trigger: CCCCCTTCCCGTCCCTGTGCACCCTGGTGGAGTGCC...GTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp ACTCAACTCCACCAGGCAGGCTCCCAACTCCTCGTGCAGAGAAAGAAGTGGGAGCTGCGATGCTGTAGATaGAGGCTTTCTGCTGCACCC +
Preference number: 4 (lower is better)
Translates to: TQLHQAGSQLLVQRKKWELRCCR*RLSAAP
Trigger: GGGTGCAGCAGAAAGCCTGCATCTACAGCATCGCAG...CTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAGCCTGCCTGGTGGAGTTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp GGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAGAGATCGTGGTGTCCTaGAGGACCAGCTGGACCCTG +
Preference number: 4 (lower is better)
Translates to: GADHPTTSKPWNAISVTREIVVS*RTSWTL
Trigger: CAGGGTCCAGCTGGTCCTGCAGGACACCACGATCTC...TCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp CACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGGAGATCGTGGTGTCCTaGAGGACCAGCTGGACCCTG +
Preference number: 4 (lower is better)
Translates to: HISEDGADHPTTSKPWNAEIVVS*RTSWTL
Trigger: CAGGGTCCAGCTGGTCCTGCAGGACACCACGATCTC...CGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp AAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCGAGATCGTGGTGTCCTaGAGGACCAGCTGGACCCTG +
Preference number: 4 (lower is better)
Translates to: KPWNAISVTRIQGQGFLPEIVVS*RTSWTL
Trigger: CAGGGTCCAGCTGGTCCTGCAGGACACCACGATCTC...GGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp ATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGGGCAGTGCCACGGGTaGCAGCTGCCCAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: IIPPHQNPGTRYPLPEFRGQCHG*QLPSQD
Trigger: ATCCTGGCTGGGCAGCTGGCACCCGTGGCACTGCCC...CCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR GCA 90 bp CACATGACGGGCATCACTCAACTCCACCAGGCAGGCTCCCAACTCCTCGTGCAGAGGAGGTGTACAGGGTaGCACTTGAACACAGCAACA +
Preference number: 4 (lower is better)
Translates to: HMTGITQLHQAGSQLLVQRRCTG*HLNTAT
Trigger: TGTTGCTGTGTTCAAGTGGCACCCTGTACACCTCCT...CTGCACGAGGAGTTGGGAGCCTGCCTGGTGGAGTTGAGTGATGCCCGTCATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR GCA 90 bp AGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGTGCAGCATGGACCTGTaGCCGCTCCCACAGACACGG +
Preference number: 4 (lower is better)
Translates to: STSVKMVRIIPPHQNPGTCSMDL*PLPQTR
Trigger: CCGTGTCTGTGGGAGCGGGCACAGGTCCATGCTGCA...CGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp GGCATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCATGCAGCATGGACCTGTaGCCGCTCCCACAGACACGG +
Preference number: 4 (lower is better)
Translates to: GIKGKHISEDGADHPTTSCSMDL*PLPQTR
Trigger: CCGTGTCTGTGGGAGCGGGCACAGGTCCATGCTGCA...TGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp GTCCCCAGGGCACACCCACAGGTCCATAGTTGTCACATCACACTGAGACTGCTGTGGGCCAGCTTGGGTTaGAGCTATGTGGGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: VPRAHPQVHSCHITLRLLWASLG*SYVGPN
Trigger: GTTTGGACCCACATAGCTGCAACCCAAGCTGGCCCA...CAGCAGTCTCAGTGTGATGTGACAACTATGGACCTGTGGGTGTGCCCTGGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp ATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGAACAGGATGTCCTTCGGCCCAGCAGGATGTaGATGCTCCTGGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: IRYQNSGPGLSSPEQDVLRPSRM*MLLEQQ
Trigger: CTGCTGCTCCAGGAGCATCCACATCCTGCTGGGCCG...AAGGACATCCTGTTCAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CACTCAATGGGCATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCCGGCCCAGCAGGATGTaGATGCTCCTGGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: HSMGIKGKHISEDGADHPRPSRM*MLLEQQ
Trigger: CTGCTGCTCCAGGAGCATCCACATCCTGCTGGGCCG...GGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGATGCCCATTGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CCTGAGAAGGCGACTCCTGTCCGTCCATGGCTCTTAGGCCAGCTGGGAAAGCTCGGCTCACTGGAAACTTaGGGTGATCCATGCTACTTG +
Preference number: 4 (lower is better)
Translates to: PEKATPVRPWLLGQLGKLGSLET*GDPCYL
Trigger: CAAGTAGCATGGATCACCCCAAGTTTCCAGTGAGCC...GAGCTTTCCCAGCTGGCCTAAGAGCCATGGACGGACAGGAGTCGCCTTCTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp AGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACTGTCTAGGGTGGCCATaGGAGAGGGCAGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RWCGSSHHIKTLERDIRYCLGWP*ERAACR
Trigger: CCTGCAGGCTGCCCTCTCCCATGGCCACCCTAGACA...GTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAAGGTCTCTGTCTAGGGTaGCCATGGGAGAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: VRIIPPHQNPGTRYPLPEGLCLG*PWERAA
Trigger: GGCTGCCCTCTCCCATGGCCACCCTAGACAGAGACC...TTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGCCCCTCCTGTGCTGCTaGGCCCCACTGCTGATTATG +
Preference number: 4 (lower is better)
Translates to: HISEDGADHPTTSKPWNAPLLCC*APLLIM
Trigger: CATAATCAGCAGTGGGGCCCAGCAGCACAGGAGGGG...CGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp TCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACGGATGGCCAGCAGGTTaGGGAGCAGGCCCAGGACGA +
Preference number: 4 (lower is better)
Translates to: SKGSTSVKMVRIIPPHQNGWPAG*GAGPGR
Trigger: TCGTCCTGGGCCTGCTCCTCAACCTGCTGGCCATCC...GTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp TGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGAACAGCAGCAGAAGCCCATaGTGCCCATGGGAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: WNAISVTRIQGQGFLPLNSSRSP*CPWEGG
Trigger: TCCTCCTTCCCATGGGCATCATGGGCTTCTGCTGCT...GTTCAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp AGGCTCCCAACTCCTCGTGCAGAGAAAGAAGTGGGAGGAGGGTGGTCACTAAATAGCAGCAGAAGCCCATaGTGCCCATGGGAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: RLPTPRAEKEVGGGWSLNSSRSP*CPWEGG
Trigger: TCCTCCTTCCCATGGGCATCATGGGCTTCTGCTGCT...ATTTAGTGACCACCCTCCTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp CACATGACGGGCATCACTCAACTCCACCAGGCAGGCTCCCAACTCCTCGTGCAGTTCTTCAGAGATCCCTaGACACTGGGTGGTATAAGC +
Preference number: 4 (lower is better)
Translates to: HMTGITQLHQAGSQLLVQFFRDP*TLGGIS
Trigger: GCTTATACCACCCAGTGTTCAGGGATCTCTGAAGAA...CTGCACGAGGAGTTGGGAGCCTGCCTGGTGGAGTTGAGTGATGCCCGTCATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp CTGTGCCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCATGGAAACAGCCTTGTTaGCATGGTCTCATTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LCPLPQTRVPTEKRPFFPWKQPC*HGLILF
Trigger: AAAGAGAATGAGACCATGTCAACAAGGCTGTTTCCA...TGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp CAAGTGCACATGACGGGCATCACTCAACTCCACCAGGCAGGCTCCCAACTCCTCCTTCCTTCACCTTTCTaGGGCTCACTGGAAACTTGG +
Preference number: 4 (lower is better)
Translates to: QVHMTGITQLHQAGSQLLLPSPF*GSLETW
Trigger: CCAAGTTTCCAGTGAGCCTCAGAAAGGTGAAGGAAG...GAGGAGTTGGGAGCCTGCCTGGTGGAGTTGAGTGATGCCCGTCATGTGCACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR TCA 90 bp ATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGAGCGGGAGCTGCTCCTaGGAAGGCGACTCCTGTCCG +
Preference number: 4 (lower is better)
Translates to: IIPPHQNPGTRYPLPEFRSGSCS*EGDSCP
Trigger: CGGACAGGAGTCGCCTTCTCAGGAGCAGCTCCCGCT...CCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR TCA 90 bp CTCCCAACTCCTCGTGCAGAGAAAGAAGTGGGAGGAGGGTGGTCACTAAATCCAACCACCCGTAGACACTaGCCCGAACCAGCCCCAAAT +
Preference number: 4 (lower is better)
Translates to: LPTPRAEKEVGGGWSLNPTTRRH*PEPAPN
Trigger: ATTTGGGGCTGGTTCGGGTCAGTGTCTACGGGTGGT...TGGATTTAGTGACCACCCTCCTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp GAAGCCCATCTGGCCTTAAGCACATTGGTAGACCCAAGTGCACATGACGGGCATACCACCCGTAGACACTaGCCCGAACCAGCCCCAAAT +
Preference number: 4 (lower is better)
Translates to: EAHLALSTLVDPSAHDGHTTRRH*PEPAPN
Trigger: ATTTGGGGCTGGTTCGGGTCAGTGTCTACGGGTGGT...ATGCCCGTCATGTGCACTTGGGTCTACCAATGTGCTTAAGGCCAGATGGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp AAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTAGCTGGGCCCCACTGCTaGTTATGGGCCAGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: KMVRIIPPHQNPGTRYPLAGPHC*LWASLG
Trigger: ACCCAAGCTGGCCCATAATCAGCAGTGGGGCCCAGC...TAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp AAGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCTGGGCCCCACTGCTaGTTATGGGCCAGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: KHISEDGADHPTTSKPWNAGPHC*LWASLG
Trigger: ACCCAAGCTGGCCCATAATCAGCAGTGGGGCCCAGC...GTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp GAGAAGCCATCCAGGCGTGACTCAATTGTTTACAGTTTCCTGGGACCAGCAGGGCTACCACCCCACCTCTaGCCAAGACACTCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: EKPSRRDSIVYSFLGPAGLPPHL*PRHSPQ
Trigger: TTGGGGAGAGTGTCTTGGGCAGAGGTGGGGTGGTAG...CCCTGCTGGTCCCAGGAAACTGTAAACAATTGAGTCACGCCTGGATGGCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR GCA 90 bp TCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTTGCAGCATGGACCTGTaGCCGCTCCCACAGACACGG +
Preference number: 4 (lower is better)
Translates to: SKPWNAISVTRIQGQGFLCSMDL*PLPQTR
Trigger: CCGTGTCTGTGGGAGCGGGCACAGGTCCATGCTGCA...AAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGGTAGCGGGTAACGGATaGCCAAGAACCGGTCCATGC +
Preference number: 4 (lower is better)
Translates to: HISEDGADHPTTSKPWNAVAGNG*PRTGPC
Trigger: GCATGGACCGGTTCTTGGCCATCCGTTACCCGCTAC...CGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAGTAGCGGGTAACGGATaGCCAAGAACCGGTCCATGC +
Preference number: 4 (lower is better)
Translates to: GADHPTTSKPWNAISVTRVAGNG*PRTGPC
Trigger: GCATGGACCGGTTCTTGGCCATCCGTTACCCGCTAC...TCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp TGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGAACTCCCAAAGATCTTCCTaGGGGACCGGAGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: WNAISVTRIQGQGFLPLNSQRSS*GTGGGS
Trigger: TGAGCCACCTCCGGTCCCCCAGGAAGATCTTTGGGA...GTTCAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGACGAAGACAGCCAGGCTaGCTGCGATGCTGTAGATGC +
Preference number: 4 (lower is better)
Translates to: GADHPTTSKPWNAISVTRRRQPG*LRCCRC
Trigger: GCATCTACAGCATCGCAGCCAGCCTGGCTGTCTTCG...TCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp TCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTACCCTGGAAGGCCGGTaGGCCCTGATGTTCATGCGG +
Preference number: 4 (lower is better)
Translates to: SKPWNAISVTRIQGQGFLTLEGR*ALMFMR
Trigger: CCGCATGAACATCAGGGCCCACCGGCCTTCCAGGGT...AAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCACCCTGGAAGGCCGGTaGGCCCTGATGTTCATGCGG +
Preference number: 4 (lower is better)
Translates to: RIIPPHQNPGTRYPLPEFTLEGR*ALMFMR
Trigger: CCGCATGAACATCAGGGCCCACCGGCCTTCCAGGGT...GAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGCCCCGGGAGATCGTaGTGTCCTGCAGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: RIIPPHQNPGTRYPLPEFSPGRS*CPAGPA
Trigger: AGCTGGTCCTGCAGGACACCACGATCTCCCGGGGCT...GAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCACAGTGTTAGTCGAACAGGAAAATaGGGAGAGTTGGAAACAGCC +
Preference number: 4 (lower is better)
Translates to: RSHRHGSPRRRGPSFHSVSRTGK*GELETA
Trigger: GGCTGTTTCCAACTCTCCCCATTTTCCTGTTCGACT...AACACTGTGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CTGTGCCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCAAAGTCTGCTCTGTTCTaGGACACCCAAACTAAAAAG +
Preference number: 4 (lower is better)
Translates to: LCPLPQTRVPTEKRPFFPKSALF*DTQTKK
Trigger: CTTTTTAGTTTGGGTGTCCCAGAACAGAGCAGACTT...TGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp ATGCAGGTGAGTAAGACAGCACCTCCTCCACCCTCCTATGGTGGAACCAAGGCATCCACCCTCCTATGGTaGAACCAAGGCAGGCCTGAT +
Preference number: 4 (lower is better)
Translates to: MQVSKTAPPPPSYGGTKASTLLW*NQGRPD
Trigger: ATCAGGCCTGCCTTGGTTCCACCATAGGAGGGTGGA...TGCCTTGGTTCCACCATAGGAGGGTGGAGGAGGTGCTGTCTTACTCACCTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp TGCAGAGAAAGAAGTGGGAGGAGGGTGGTCACTAAATCCACCACCCGTAGACACCCCTCTGGTCTGGTCTaGTCTGGTCTGGTCACTCCT +
Preference number: 4 (lower is better)
Translates to: CRERSGRRVVTKSTTRRHPSGLV*SGLVTP
Trigger: AGGAGTGACCAGACCAGACCAGACCAGACCAGAGGG...GTGTCTACGGGTGGTGGATTTAGTGACCACCCTCCTCCCACTTCTTTCTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCCCCTCTGGTCTGGTCTaGTCTGGTCTGGTCACTCCT +
Preference number: 4 (lower is better)
Translates to: DGADHPTTSKPWNAISVTPSGLV*SGLVTP
Trigger: AGGAGTGACCAGACCAGACCAGACCAGACCAGAGGG...GGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGCCGATCCCTCTGGTCTaGTCTGGTCTGGTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: VKMVRIIPPHQNPGTRYPPIPLV*SGLVWS
Trigger: TGACCAGACCAGACCAGACCAGACCAGAGGGATCGG...CGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CTCCCAACTCCTCGTGCAGAGAAAGAAGTGGGAGGAGGGTGGTCACTAAATCCACCGATCCCTCTGGTCTaGTCTGGTCTGGTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: LPTPRAEKEVGGGWSLNPPIPLV*SGLVWS
Trigger: TGACCAGACCAGACCAGACCAGACCAGAGGGATCGG...TGGATTTAGTGACCACCCTCCTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp TGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGAACAGCCTCCGATCCCTCTaGTCTGGTCTGGTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: WNAISVTRIQGQGFLPLNSLRSL*SGLVWS
Trigger: AGACCAGACCAGACCAGACCAGAGGGATCGGAGGCT...GTTCAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GAGGCTCACTGGAAACTTGGGGTGATCCATGCTACTTGCCCAGCCCCAACACCAGCCCTTTCTGTCACCTaGAGAGAGTCATGCTGCACA +
Preference number: 4 (lower is better)
Translates to: EAHWKLGVIHATCPAPTPALSVT*RESCCT
Trigger: TGTGCAGCATGACTCTCTCCAGGTGACAGAAAGGGC...TGGTGTTGGGGCTGGGCAAGTAGCATGGATCACCCCAAGTTTCCAGTGAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp AGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCCCCTCCTGTGCTGCTaGGCCCCACTGCTGATTATG +
Preference number: 4 (lower is better)
Translates to: STSVKMVRIIPPHQNPGTPLLCC*APLLIM
Trigger: CATAATCAGCAGTGGGGCCCAGCAGCACAGGAGGGG...CGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR CAA 72 bp CTTCTCATCATTTCACTCTCCGGAGCAGCTGAGTCATaGGGAGGCTTCCGCTGTCACTTGCACTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LLIISLSGAAES*GGFRCHLHSSS
Trigger: GGAGGAGGAGTGCAAGTGACAGCGGAAGCCTCCCAATGACTCAGCTGCTCCGGAGAGTGAAATGATGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR TCA 90 bp ATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGAACAGGATGTCCTTGGGACAGGACCATCTTaGATGGGAGGGAGAGCACCA +
Preference number: 4 (lower is better)
Translates to: IRYQNSGPGLSSPEQDVLGTGPS*MGGRAP
Trigger: TGGTGCTCTCCCTCCCATTCAAGATGGTCCTGTCCC...AAGGACATCCTGTTCAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp AGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGGGGACAGGACCATCTTaGATGGGAGGGAGAGCACCA +
Preference number: 4 (lower is better)
Translates to: STSVKMVRIIPPHQNPGTGTGPS*MGGRAP
Trigger: TGGTGCTCTCCCTCCCATTCAAGATGGTCCTGTCCC...CGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp GGAAGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAAGCAGCAGAAGCCCATaGTGCCCATGGGAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: GSTSVKMVRIIPPHQNPGSSRSP*CPWEGG
Trigger: TCCTCCTTCCCATGGGCATCATGGGCTTCTGCTGCT...TCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp AACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGAACAGGAAGGCCGGTGGGCCCTaGTGTTCATGCGGAATTCTT +
Preference number: 4 (lower is better)
Translates to: NAISVTRIQGQGFLPLNRKAGGP*CSCGIL
Trigger: AAGAATTCCGCATGAACATCAGGGCCCACCGGCCTT...CCTGTTCAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp AAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCAAGGCCGGTGGGCCCTaGTGTTCATGCGGAATTCTT +
Preference number: 4 (lower is better)
Translates to: KPWNAISVTRIQGQGFLPKAGGP*CSCGIL
Trigger: AAGAATTCCGCATGAACATCAGGGCCCACCGGCCTT...GGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp GAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTCCCTTCAGCCCCCACTaGGCCCAGATCCTACAAGTA +
Preference number: 4 (lower is better)
Translates to: EDGADHPTTSKPWNAISVPFSPH*AQILQV
Trigger: TACTTGTAGGATCTGGGCTCAGTGGGGGCTGAAGGG...AACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR TCA 90 bp ATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGAACAGGATGTCCTTACCACCCGTAGACACTaGCCCGAACCAGCCCCAAAT +
Preference number: 4 (lower is better)
Translates to: IRYQNSGPGLSSPEQDVLTTRRH*PEPAPN
Trigger: ATTTGGGGCTGGTTCGGGTCAGTGTCTACGGGTGGT...AAGGACATCCTGTTCAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp CCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGAGACCCAAGTGCACATaGCGGGCATCACTCAACTCC +
Preference number: 4 (lower is better)
Translates to: PTTSKPWNAISVTRIQGQRPKCT*RASLNS
Trigger: GGAGTTGAGTGATGCCCGTCATGTGCACTTGGGTCT...CTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp CTCCCAACTCCTCGTGCAGAGAAAGAAGTGGGAGGAGGGTGGTCACTAAATCCAAGACCCAAGTGCACATaGCGGGCATCACTCAACTCC +
Preference number: 4 (lower is better)
Translates to: LPTPRAEKEVGGGWSLNPRPKCT*RASLNS
Trigger: GGAGTTGAGTGATGCCCGTCATGTGCACTTGGGTCT...TGGATTTAGTGACCACCCTCCTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp CACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTCCGTCCCTCCCTACATaGTCAGGTCCTCTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: HIKTLERDIRYQNSGPGLPSLPT*SGPLSC
Trigger: ACAGCTGAGAGGACCTGATCATGTAGGGAGGGACGG...AAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp GATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCCTGCGATGCTGTAGATaGAGGCTTTCTGCTGCACCC +
Preference number: 4 (lower is better)
Translates to: DGADHPTTSKPWNAISVTLRCCR*RLSAAP
Trigger: GGGTGCAGCAGAAAGCCTGCATCTACAGCATCGCAG...GGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp GAGGCTCACTGGAAACTTGGGGTGATCCATGCTACTTGCCCAGCCCCAACACCAAAGAAGCTGATGCTCTaGTTGGCTCTGCACTCTACG +
Preference number: 4 (lower is better)
Translates to: EAHWKLGVIHATCPAPTPKKLML*LALHST
Trigger: CGTAGAGTGCAGAGCCAAGCAGAGCATCAGCTTCTT...TGGTGTTGGGGCTGGGCAAGTAGCATGGATCACCCCAAGTTTCCAGTGAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR GCA 90 bp AAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTAGAGATCGTGGTGTCCTaGAGGACCAGCTGGACCCTG +
Preference number: 4 (lower is better)
Translates to: KMVRIIPPHQNPGTRYPLEIVVS*RTSWTL
Trigger: CAGGGTCCAGCTGGTCCTGCAGGACACCACGATCTC...TAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp CTGTGCCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCATCACACAGCAATTCATaGCCATTGAATCACAACTGT +
Preference number: 4 (lower is better)
Translates to: LCPLPQTRVPTEKRPFFPSHSNS*PLNHNC
Trigger: ACAGTTGTGATTCAATGGGCATGAATTGCTGTGTGA...TGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp ATCACACTGAGACTGCTGATACCCTCCAAGGACCTTCCTCTTACAGCCATGCAGCTACCACCCCACCTCTaGCCAAGACACTCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: ITLRLLIPSKDLPLTAMQLPPHL*PRHSPQ
Trigger: TTGGGGAGAGTGTCTTGGGCAGAGGTGGGGTGGTAG...CTGCATGGCTGTAAGAGGAAGGTCCTTGGAGGGTATCAGCAGTCTCAGTGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR GCA 90 bp ATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGAACAGGATGTCCTTGCTTCCGCTGTCACTTaGACTCCTCCTCCAGATCCG +
Preference number: 4 (lower is better)
Translates to: IRYQNSGPGLSSPEQDVLASAVT*TPPPDP
Trigger: CGGATCTGGAGGAGGAGTGCAAGTGACAGCGGAAGC...AAGGACATCCTGTTCAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR GCA 90 bp AACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGAACAGGGCTCCCAACTCCTCGTaGAGAGAAAGAAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: NAISVTRIQGQGFLPLNRAPNSS*RERSGR
Trigger: CCTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAGC...CCTGTTCAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp GGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAGCTCCCAACTCCTCGTaGAGAGAAAGAAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GADHPTTSKPWNAISVTRAPNSS*RERSGR
Trigger: CCTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAGC...TCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp ATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGTGCAGCATGGACCTGTaGCCGCTCCCACAGACACGG +
Preference number: 4 (lower is better)
Translates to: IIPPHQNPGTRYPLPEFRCSMDL*PLPQTR
Trigger: CCGTGTCTGTGGGAGCGGGCACAGGTCCATGCTGCA...CCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp ATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAAGCAGCCGTAGTGGCCTaGAGCATGGACCTGTGCCCG +
Preference number: 4 (lower is better)
Translates to: IKGKHISEDGADHPTTSKAAVVA*SMDLCP
Trigger: CGGGCACAGGTCCATGCTGCAGGCCACTACGGCTGC...TTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp ACTCAACTCCACCAGGCAGGCTCCCAACTCCTCGTGCAGAGAAAGAAGTGGGAGACGAAGGTGGGGATGTaGACTGCAAACTGTAGGGTT +
Preference number: 4 (lower is better)
Translates to: TQLHQAGSQLLVQRKKWETKVGM*TANCRV
Trigger: AACCCTACAGTTTGCAGTCCACATCCCCACCTTCGT...CTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAGCCTGCCTGGTGGAGTTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGAAGGTGCTGAAGCCATaGATGGCCAGCAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: VKMVRIIPPHQNPGTRYPKVLKP*MASRLR
Trigger: CCTCAACCTGCTGGCCATCCATGGCTTCAGCACCTT...CGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGAAGGGGGACTGTACCTaGGACAGGACCATCTTGAAT +
Preference number: 4 (lower is better)
Translates to: PWNAISVTRIQGQGFLPLKGDCT*DRTILN
Trigger: ATTCAAGATGGTCCTGTCCCAGGTACAGTCCCCCTT...CAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp AGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGGTAGCGGGTAACGGATaGCCAAGAACCGGTCCATGC +
Preference number: 4 (lower is better)
Translates to: STSVKMVRIIPPHQNPGTVAGNG*PRTGPC
Trigger: GCATGGACCGGTTCTTGGCCATCCGTTACCCGCTAC...CGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp AAAGCTGGCACTCAATGGGCATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGGTAGCGGGTAACGGATaGCCAAGAACCGGTCCATGC +
Preference number: 4 (lower is better)
Translates to: KAGTQWASKGSTSVKMVRVAGNG*PRTGPC
Trigger: GCATGGACCGGTTCTTGGCCATCCGTTACCCGCTAC...CCGCACCATCTTCACTGATGTGCTTCCCTTTGATGCCCATTGAGTGCCAGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp AAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCTCCCAAAGATCTTCCTaGGGGACCGGAGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: KTLERDIRYQNSGPGLSSSQRSS*GTGGGS
Trigger: TGAGCCACCTCCGGTCCCCCAGGAAGATCTTTGGGA...GGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCGCGGGAAGAAGACCTTaGCGCTCCAGGTATCATCAG +
Preference number: 4 (lower is better)
Translates to: DGADHPTTSKPWNAISVTAGRRP*RSRYHQ
Trigger: CTGATGATACCTGGAGCGCCAAGGTCTTCTTCCCGC...GGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGCGGGAAGAAGACCTTaGCGCTCCAGGTATCATCAG +
Preference number: 4 (lower is better)
Translates to: PTTSKPWNAISVTRIQGQAGRRP*RSRYHQ
Trigger: CTGATGATACCTGGAGCGCCAAGGTCTTCTTCCCGC...CTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp TTCCAGAAGGGACTGGAAAATGCAAGTCTGCTCTGTTCTGGGACACCCAAACTACGGCCCAGCAGGATGTaGATGCTCCTGGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: FQKGLENASLLCSGTPKLRPSRM*MLLEQQ
Trigger: CTGCTGCTCCAGGAGCATCCACATCCTGCTGGGCCG...TAGTTTGGGTGTCCCAGAACAGAGCAGACTTGCATTTTCCAGTCCCTTCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp AGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGAAGACAGCCAGGCTaGCTGCGATGCTGTAGATGC +
Preference number: 4 (lower is better)
Translates to: STSVKMVRIIPPHQNPGTRRQPG*LRCCRC
Trigger: GCATCTACAGCATCGCAGCCAGCCTGGCTGTCTTCG...CGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp TGCCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCACAGTATAATGAGCAAAGCTaGCACTCAATGGGCATCAAA +
Preference number: 4 (lower is better)
Translates to: CPLPQTRVPTEKRPFFPQYNEQS*HSMGIK
Trigger: TTTGATGCCCATTGAGTGCCAGCTTTGCTCATTATA...CTGTGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp ATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGAACAGGATGTCCTTTGTCTCTCTTCACCCTaGGCCAGCACCAACACTCCG +
Preference number: 4 (lower is better)
Translates to: IRYQNSGPGLSSPEQDVLCLSSP*ASTNTP
Trigger: CGGAGTGTTGGTGCTGGCCCAGGGTGAAGAGAGACA...AAGGACATCCTGTTCAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp CTCCCAACTCCTCGTGCAGAGAAAGAAGTGGGAGGAGGGTGGTCACTAAATCCATCCACCCTCCTATGGTaGAACCAAGGCAGGCCTGAT +
Preference number: 4 (lower is better)
Translates to: LPTPRAEKEVGGGWSLNPSTLLW*NQGRPD
Trigger: ATCAGGCCTGCCTTGGTTCCACCATAGGAGGGTGGA...TGGATTTAGTGACCACCCTCCTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp AAAGCTGGCACTCAATGGGCATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGTCCTCCACCCTCCTATaGTGGAACCAAGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: KAGTQWASKGSTSVKMVRSSTLL*WNQGRP
Trigger: AGGCCTGCCTTGGTTCCACCATAGGAGGGTGGAGGA...CCGCACCATCTTCACTGATGTGCTTCCCTTTGATGCCCATTGAGTGCCAGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp AAAGCTGGCACTCAATGGGCATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGACTCCTGTCCGTCCATaGCTCTTAGGCCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: KAGTQWASKGSTSVKMVRTPVRP*LLGQLG
Trigger: TCCCAGCTGGCCTAAGAGCCATGGACGGACAGGAGT...CCGCACCATCTTCACTGATGTGCTTCCCTTTGATGCCCATTGAGTGCCAGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp GAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTCCCTCTGGTCTGGTCTaGTCTGGTCTGGTCACTCCT +
Preference number: 4 (lower is better)
Translates to: EDGADHPTTSKPWNAISVPSGLV*SGLVTP
Trigger: AGGAGTGACCAGACCAGACCAGACCAGACCAGAGGG...AACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp AGGCTCCCAACTCCTCGTGCAGAGAAAGAAGTGGGAGGAGGGTGGTCACTAAATCAGAGCCTGACTCTGTaGCTGTGGTTCTTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: RLPTPRAEKEVGGGWSLNQSLTL*LWFLEA
Trigger: GGCCTCTAAGAACCACAGCCACAGAGTCAGGCTCTG...ATTTAGTGACCACCCTCCTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp TTCCAGAAGGGACTGGAAAATGCAAGTCTGCTCTGTTCTGGGACACCCAAACTATGTCTAGGGTGGCCATaGGAGAGGGCAGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: FQKGLENASLLCSGTPKLCLGWP*ERAACR
Trigger: CCTGCAGGCTGCCCTCTCCCATGGCCACCCTAGACA...TAGTTTGGGTGTCCCAGAACAGAGCAGACTTGCATTTTCCAGTCCCTTCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp ATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGGTCTCTGTCTAGGGTaGCCATGGGAGAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: IIPPHQNPGTRYPLPEFRGLCLG*PWERAA
Trigger: GGCTGCCCTCTCCCATGGCCACCCTAGACAGAGACC...CCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGTCTCTGTCTAGGGTaGCCATGGGAGAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GSSHHIKTLERDIRYQNSGLCLG*PWERAA
Trigger: GGCTGCCCTCTCCCATGGCCACCCTAGACAGAGACC...TGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGACTTTCCACAGTGTTTTaGGATGGGTCAGGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: GADHPTTSKPWNAISVTRLSTVF*DGSGVP
Trigger: GGGGACCCCTGACCCATCCCAAAACACTGTGGAAAG...TCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGCTTTCCACAGTGTTTTaGGATGGGTCAGGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: VKMVRIIPPHQNPGTRYPLSTVF*DGSGVP
Trigger: GGGGACCCCTGACCCATCCCAAAACACTGTGGAAAG...CGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CTCCCAACTCCTCGTGCAGAGAAAGAAGTGGGAGGAGGGTGGTCACTAAATCCATGGGTTGCAGCTATGTaGGTCCAAACTCTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: LPTPRAEKEVGGGWSLNPWVAAM*VQTLGP
Trigger: AGGGCCGAGAGTTTGGACCCACATAGCTGCAACCCA...TGGATTTAGTGACCACCCTCCTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR CAA 72 bp GGCTCTTGGATGTCATCAACACCCCACTCAGTCATTTaGCAGTCTTCTCACGGGCACGGAAAGGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GSWMSSTPHSVI*QSSHGHGKVWL
Trigger: CAGCCACACCTTTCCGTGCCCGTGAGAAGACTGCAAAATGACTGAGTGGGGTGTTGATGACATCCAAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR TCA 90 bp CACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGCGCTTCCGTACATGCTaGCGAAGTAAAGGCACTCCA +
Preference number: 4 (lower is better)
Translates to: HISEDGADHPTTSKPWNARFRTC*RSKGTP
Trigger: TGGAGTGCCTTTACTTCGTCAGCATGTACGGAAGCG...CGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp ATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAAGGCCGGTGGGCCCTaGTGTTCATGCGGAATTCTT +
Preference number: 4 (lower is better)
Translates to: IPPHQNPGTRYPLPEFRAKAGGP*CSCGIL
Trigger: AAGAATTCCGCATGAACATCAGGGCCCACCGGCCTT...GGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp GAGAAGCCATCCAGGCGTGACTCAATTGTTTACAGTTTCCTGGGACCAGCAGGGACTCTCCCCAATAACTaGCTCTCTTGGCTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: EKPSRRDSIVYSFLGPAGTLPNN*LSWLPP
Trigger: AGGAGGGAGCCAAGAGAGTCAGTTATTGGGGAGAGT...CCCTGCTGGTCCCAGGAAACTGTAAACAATTGAGTCACGCCTGGATGGCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR TCA 90 bp GATAAGATTTTATGTTTGAACATCGCTGGGGATGATAGTTGGTTAGGTCCACCCCCAGCTCAGGGGGCCTaGGCCTCCGATCCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: DKILCLNIAGDDSWLGPPPAQGA*ASDPSG
Trigger: ACCAGAGGGATCGGAGGCTCAGGCCCCCTGAGCTGG...GGGTGGACCTAACCAACTATCATCCCCAGCGATGTTCAAACATAAAATCTTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp ATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGAACAGGATGTCCTTATGCCCCGTTGCATGTaGAAGTCTGGCTCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: IRYQNSGPGLSSPEQDVLMPRCM*KSGSLR
Trigger: TCTGAGGGAGCCAGACTTTCACATGCAACGGGGCAT...AAGGACATCCTGTTCAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp TCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCGTCCCTCCCTACATaGTCAGGTCCTCTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: SSHHIKTLERDIRYQNSGPSLPT*SGPLSC
Trigger: ACAGCTGAGAGGACCTGATCATGTAGGGAGGGACGG...CCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp AGGCTCCCAACTCCTCGTGCAGAGAAAGAAGTGGGAGGAGGGTGGTCACTAAATCCAGGACCCAGATGGTaGAGCAGATCCCAAAGATCT +
Preference number: 4 (lower is better)
Translates to: RLPTPRAEKEVGGGWSLNPGPRW*SRSQRS
Trigger: AGATCTTTGGGATCTGCTGCACCATCTGGGTCCTGG...ATTTAGTGACCACCCTCCTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp AGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCTGCGATGCTGTAGATaGAGGCTTTCTGCTGCACCC +
Preference number: 4 (lower is better)
Translates to: RWCGSSHHIKTLERDIRYLRCCR*RLSAAP
Trigger: GGGTGCAGCAGAAAGCCTGCATCTACAGCATCGCAG...GTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp GGAAGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGACCAGGCTGGCTGCGATaGTGTAGATGCAGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: GSTSVKMVRIIPPHQNPGPGWLR*CRCRLS
Trigger: AGAAAGCCTGCATCTACAGCATCGCAGCCAGCCTGG...TCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp CACTCAATGGGCATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCACTTGGGGTGATCCATaGTACTTGCCCAGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: HSMGIKGKHISEDGADHPTWGDP*YLPSPN
Trigger: GTTGGGGCTGGGCAAGTAGCATGGATCACCCCAAGT...GGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGATGCCCATTGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR GCA 90 bp CACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGCGAACCAGCCCCAAATaGCCCGTTGCATGTGAAAGT +
Preference number: 4 (lower is better)
Translates to: HISEDGADHPTTSKPWNARTSPK*PVACES
Trigger: ACTTTCACATGCAACGGGGCATTTGGGGCTGGTTCG...CGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp ACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGAGCTCCCAACTCCTCGTaGAGAGAAAGAAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: TSVKMVRIIPPHQNPGTRAPNSS*RERSGR
Trigger: CCTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAGC...TCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp GTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATGGGCCAGCTTGGGTTaGAGCTATGTGGGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: VRIIPPHQNPGTRYPLPEWASLG*SYVGPN
Trigger: GTTTGGACCCACATAGCTGCAACCCAAGCTGGCCCA...TTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp ACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGAAAGGTGCTGAAGCCATaGATGGCCAGCAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: TSVKMVRIIPPHQNPGTRKVLKP*MASRLR
Trigger: CCTCAACCTGCTGGCCATCCATGGCTTCAGCACCTT...TCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTAAGGTGCTGAAGCCATaGATGGCCAGCAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: HIKTLERDIRYQNSGPGLKVLKP*MASRLR
Trigger: CCTCAACCTGCTGGCCATCCATGGCTTCAGCACCTT...AAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGTCATGTAGATGGAGGTaGCAGCATAATCGGGCCACC +
Preference number: 4 (lower is better)
Translates to: PTTSKPWNAISVTRIQGQSCRWR*QHNRAT
Trigger: GGTGGCCCGATTATGCTGCCACCTCCATCTACATGA...CTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp TGCAGAGAAAGAAGTGGGAGGAGGGTGGTCACTAAATCCACCACCCGTAGACACTCATGTAGATGGAGGTaGCAGCATAATCGGGCCACC +
Preference number: 4 (lower is better)
Translates to: CRERSGRRVVTKSTTRRHSCRWR*QHNRAT
Trigger: GGTGGCCCGATTATGCTGCCACCTCCATCTACATGA...GTGTCTACGGGTGGTGGATTTAGTGACCACCCTCCTCCCACTTCTTTCTCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp ATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGAACAGGATGTCCTTCAGGACCATCTTGAATaGGAGGGAGAGCACCAGCAG +
Preference number: 4 (lower is better)
Translates to: IRYQNSGPGLSSPEQDVLQDHLE*EGEHQQ
Trigger: CTGCTGGTGCTCTCCCTCCCATTCAAGATGGTCCTG...AAGGACATCCTGTTCAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CACTCAATGGGCATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCCAGGACCATCTTGAATaGGAGGGAGAGCACCAGCAG +
Preference number: 4 (lower is better)
Translates to: HSMGIKGKHISEDGADHPQDHLE*EGEHQQ
Trigger: CTGCTGGTGCTCTCCCTCCCATTCAAGATGGTCCTG...GGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGATGCCCATTGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp AGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCAGGACCATCTTGAATaGGAGGGAGAGCACCAGCAG +
Preference number: 4 (lower is better)
Translates to: STSVKMVRIIPPHQNPGTQDHLE*EGEHQQ
Trigger: CTGCTGGTGCTCTCCCTCCCATTCAAGATGGTCCTG...CGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTCAGGACCATCTTGAATaGGAGGGAGAGCACCAGCAG +
Preference number: 4 (lower is better)
Translates to: HIKTLERDIRYQNSGPGLQDHLE*EGEHQQ
Trigger: CTGCTGGTGCTCTCCCTCCCATTCAAGATGGTCCTG...AAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp AAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTATCCCAAAGATCTTCCTaGGGGACCGGAGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: KMVRIIPPHQNPGTRYPLSQRSS*GTGGGS
Trigger: TGAGCCACCTCCGGTCCCCCAGGAAGATCTTTGGGA...TAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp AACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGAACAGGACACCAGGACCCAGATaGTGCAGCAGATCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: NAISVTRIQGQGFLPLNRTPGPR*CSRSQR
Trigger: TCTTTGGGATCTGCTGCACCATCTGGGTCCTGGTGT...CCTGTTCAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAACACCAGGACCCAGATaGTGCAGCAGATCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: GADHPTTSKPWNAISVTRTPGPR*CSRSQR
Trigger: TCTTTGGGATCTGCTGCACCATCTGGGTCCTGGTGT...TCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp AGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACGCGGGAAGAAGACCTTaGCGCTCCAGGTATCATCAG +
Preference number: 4 (lower is better)
Translates to: RWCGSSHHIKTLERDIRYAGRRP*RSRYHQ
Trigger: CTGATGATACCTGGAGCGCCAAGGTCTTCTTCCCGC...GTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGTCCCTGAACACTGGGTaGTATAAGCTGTCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: HISEDGADHPTTSKPWNASLNTG*YKLSGQ
Trigger: CTGCCCAGACAGCTTATACCACCCAGTGTTCAGGGA...CGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp TGCAGAGAAAGAAGTGGGAGGAGGGTGGTCACTAAATCCACCACCCGTAGACACTCCCTGAACACTGGGTaGTATAAGCTGTCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: CRERSGRRVVTKSTTRRHSLNTG*YKLSGQ
Trigger: CTGCCCAGACAGCTTATACCACCCAGTGTTCAGGGA...GTGTCTACGGGTGGTGGATTTAGTGACCACCCTCCTCCCACTTCTTTCTCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp ATCACACTGAGACTGCTGATACCCTCCAAGGACCTTCCTCTTACAGCCATGCAGCCCCCTCATGGCTCTTaGATGTCATCAACACCCCAC +
Preference number: 4 (lower is better)
Translates to: ITLRLLIPSKDLPLTAMQPPHGS*MSSTPH
Trigger: GTGGGGTGTTGATGACATCCAAGAGCCATGAGGGGG...CTGCATGGCTGTAAGAGGAAGGTCCTTGGAGGGTATCAGCAGTCTCAGTGTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp ATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGAACAGGATGTCCTTCCCCCTCATGGCTCTTaGATGTCATCAACACCCCAC +
Preference number: 4 (lower is better)
Translates to: IRYQNSGPGLSSPEQDVLPPHGS*MSSTPH
Trigger: GTGGGGTGTTGATGACATCCAAGAGCCATGAGGGGG...AAGGACATCCTGTTCAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp AAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCGAGCAGCTGAGTCATTaGGAGGCTTCCGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: KTLERDIRYQNSGPGLSSEQLSH*EASAVT
Trigger: AGTGACAGCGGAAGCCTCCCAATGACTCAGCTGCTC...GGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp ACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATGGTCTGGTCTGGTCTaGTCACTCCTCCACATCCAC +
Preference number: 4 (lower is better)
Translates to: TSVKMVRIIPPHQNPGTRWSGLV*SLLHIH
Trigger: GTGGATGTGGAGGAGTGACCAGACCAGACCAGACCA...TCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp TTAAGCACATTGGTAGACCCAAGTGCACATGACGGGCATCACTCAACTCCACCAAGCCTCCGATCCCTCTaGTCTGGTCTGGTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: LSTLVDPSAHDGHHSTPPSLRSL*SGLVWS
Trigger: AGACCAGACCAGACCAGACCAGAGGGATCGGAGGCT...TGGTGGAGTTGAGTGATGCCCGTCATGTGCACTTGGGTCTACCAATGTGCTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp AAAGCTGGCACTCAATGGGCATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGCAGAGCCTGACTCTGTaGCTGTGGTTCTTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: KAGTQWASKGSTSVKMVRQSLTL*LWFLEA
Trigger: GGCCTCTAAGAACCACAGCCACAGAGTCAGGCTCTG...CCGCACCATCTTCACTGATGTGCTTCCCTTTGATGCCCATTGAGTGCCAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp TTGGATGTCATCAACACCCCACTCAGTCATTTTGCAGTCTTCTCACGGGCACGGCAGAGCCTGACTCTGTaGCTGTGGTTCTTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: LDVINTPLSHFAVFSRARQSLTL*LWFLEA
Trigger: GGCCTCTAAGAACCACAGCCACAGAGTCAGGCTCTG...CCGTGCCCGTGAGAAGACTGCAAAATGACTGAGTGGGGTGTTGATGACATCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp ATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAAGGTCTCTGTCTAGGGTaGCCATGGGAGAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: IKGKHISEDGADHPTTSKGLCLG*PWERAA
Trigger: GGCTGCCCTCTCCCATGGCCACCCTAGACAGAGACC...TTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGAACAGGATGGCCCTTTCTGTCACCTaGAGAGAGTCATGCTGCACA +
Preference number: 4 (lower is better)
Translates to: AISVTRIQGQGFLPLNRMALSVT*RESCCT
Trigger: TGTGCAGCATGACTCTCTCCAGGTGACAGAAAGGGC...CATCCTGTTCAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CACTCAATGGGCATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCCTTTCCACAGTGTTTTaGGATGGGTCAGGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: HSMGIKGKHISEDGADHPLSTVF*DGSGVP
Trigger: GGGGACCCCTGACCCATCCCAAAACACTGTGGAAAG...GGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGATGCCCATTGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGGATTATGGGCCAGCTTaGGTTGCAGCTATGTGGGTC +
Preference number: 4 (lower is better)
Translates to: VKMVRIIPPHQNPGTRYPDYGPA*VAAMWV
Trigger: GACCCACATAGCTGCAACCCAAGCTGGCCCATAATC...CGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp CCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCACAGTGTTTCACTCTCTTGAAGTaGTGGATTCAAATGACTTTG +
Preference number: 4 (lower is better)
Translates to: PLPQTRVPTEKRPFFPQCFTLLK*WIQMTL
Trigger: CAAAGTCATTTGAATCCATCACTTCAAGAGAGTGAA...ACACTGTGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp AACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGAACAGGCAAAGACTGCCAGGTTaGTCATGTAGATGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: NAISVTRIQGQGFLPLNRQRLPG*SCRWRW
Trigger: CCACCTCCATCTACATGATCAACCTGGCAGTCTTTG...CCTGTTCAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp CACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTCGCTTCCGTACATGCTaGCGAAGTAAAGGCACTCCA +
Preference number: 4 (lower is better)
Translates to: HIKTLERDIRYQNSGPGLRFRTC*RSKGTP
Trigger: TGGAGTGCCTTTACTTCGTCAGCATGTACGGAAGCG...AAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp CACTCAATGGGCATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCAGGGAAGCACATCAGTaGAGATGGTGCGGATCATCC +
Preference number: 4 (lower is better)
Translates to: HSMGIKGKHISEDGADHPREAHQ*RWCGSS
Trigger: GGATGATCCGCACCATCTTCACTGATGTGCTTCCCT...GGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGATGCCCATTGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp GAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTAGGGAAGCACATCAGTaGAGATGGTGCGGATCATCC +
Preference number: 4 (lower is better)
Translates to: EDGADHPTTSKPWNAISVREAHQ*RWCGSS
Trigger: GGATGATCCGCACCATCTTCACTGATGTGCTTCCCT...AACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp GATTATGGGCCAGCTTGGGTTGCAGCTATGTGGGTCCAAACTCTCGGCCCTCCTGCAATTCATGCCCATTaGATCACAACTGTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: DYGPAWVAAMWVQTLGPPAIHAH*ITTVGG
Trigger: ACCACCAACAGTTGTGATTCAATGGGCATGAATTGC...AGGAGGGCCGAGAGTTTGGACCCACATAGCTGCAACCCAAGCTGGCCCATAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp CCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGGCAATTCATGCCCATTaGATCACAACTGTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: PWNAISVTRIQGQGFLPLAIHAH*ITTVGG
Trigger: ACCACCAACAGTTGTGATTCAATGGGCATGAATTGC...CAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp ATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCACTGGAAACTTGGGGTaGTCCATGCTACTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: IPPHQNPGTRYPLPEFRATGNLG*SMLLAQ
Trigger: CTGGGCAAGTAGCATGGATCACCCCAAGTTTCCAGT...GGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR TCA 90 bp GGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCACAGCCAGGATGCAGGTaGGTAAGACAGCACCTCCTC +
Preference number: 4 (lower is better)
Translates to: GSSHHIKTLERDIRYQNSQPGCR*VRQHLL
Trigger: GAGGAGGTGCTGTCTTACTCACCTGCATCCTGGCTG...TGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR GCA 90 bp AGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCCAGGACCCAGATGGTaGAGCAGATCCCAAAGATCT +
Preference number: 4 (lower is better)
Translates to: STSVKMVRIIPPHQNPGTPGPRW*SRSQRS
Trigger: AGATCTTTGGGATCTGCTGCACCATCTGGGTCCTGG...CGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp GAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTCCAGGACCCAGATGGTaGAGCAGATCCCAAAGATCT +
Preference number: 4 (lower is better)
Translates to: EDGADHPTTSKPWNAISVPGPRW*SRSQRS
Trigger: AGATCTTTGGGATCTGCTGCACCATCTGGGTCCTGG...AACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp AAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACTGCGATGCTGTAGATaGAGGCTTTCTGCTGCACCC +
Preference number: 4 (lower is better)
Translates to: KMVRIIPPHQNPGTRYPLLRCCR*RLSAAP
Trigger: GGGTGCAGCAGAAAGCCTGCATCTACAGCATCGCAG...TAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp AACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGAACAGGAACACCACCCCTTCTTaGTGTCATCTCAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: NAISVTRIQGQGFLPLNRNTTPS*CHLSEA
Trigger: AGCCTCACTGAGATGACAGCAAGAAGGGGTGGTGTT...CCTGTTCAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR GCA 90 bp ATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGAACAGGATGTCCTTCCCACTCAGTCATTTTaGAGTCTTCTCACGGGCACG +
Preference number: 4 (lower is better)
Translates to: IRYQNSGPGLSSPEQDVLPTQSF*SLLTGT
Trigger: CGTGCCCGTGAGAAGACTGCAAAATGACTGAGTGGG...AAGGACATCCTGTTCAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR GCA 90 bp GGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAACCCTTGTGCCTAGCTaGCTCATCTCCCTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GSSHHIKTLERDIRYQNSTLVPS*LISLPA
Trigger: AGCTGGGAGGGAGATGAGGCAGCTAGGCACAAGGGT...TGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR GCA 90 bp TCAATGGGCATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCACCCGAACCAGCCCCAAATaGCCCGTTGCATGTGAAAGT +
Preference number: 4 (lower is better)
Translates to: SMGIKGKHISEDGADHPTRTSPK*PVACES
Trigger: ACTTTCACATGCAACGGGGCATTTGGGGCTGGTTCG...GGTGGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGATGCCCATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp ACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGACGAACCAGCCCCAAATaGCCCGTTGCATGTGAAAGT +
Preference number: 4 (lower is better)
Translates to: TSVKMVRIIPPHQNPGTRRTSPK*PVACES
Trigger: ACTTTCACATGCAACGGGGCATTTGGGGCTGGTTCG...TCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp TGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGAACACAGGCAGTCCCCACTaGTGTTTTGCTGACTCATGT +
Preference number: 4 (lower is better)
Translates to: WNAISVTRIQGQGFLPLNTGSPH*CFADSC
Trigger: ACATGAGTCAGCAAAACACCAGTGGGGACTGCCTGT...GTTCAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAACGAAGGTGGGGATGTaGACTGCAAACTGTAGGGTT +
Preference number: 4 (lower is better)
Translates to: GADHPTTSKPWNAISVTRTKVGM*TANCRV
Trigger: AACCCTACAGTTTGCAGTCCACATCCCCACCTTCGT...TCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp ACACTGAGACTGCTGATACCCTCCAAGGACCTTCCTCTTACAGCCATGCAGCTCACGAAGGTGGGGATGTaGACTGCAAACTGTAGGGTT +
Preference number: 4 (lower is better)
Translates to: TLRLLIPSKDLPLTAMQLTKVGM*TANCRV
Trigger: AACCCTACAGTTTGCAGTCCACATCCCCACCTTCGT...GAGCTGCATGGCTGTAAGAGGAAGGTCCTTGGAGGGTATCAGCAGTCTCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp AGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCTCATGTAGATGGAGGTaGCAGCATAATCGGGCCACC +
Preference number: 4 (lower is better)
Translates to: SEDGADHPTTSKPWNAISSCRWR*QHNRAT
Trigger: GGTGGCCCGATTATGCTGCCACCTCCATCTACATGA...GGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGAAGGGGGACTGTACCTaGGACAGGACCATCTTGAAT +
Preference number: 4 (lower is better)
Translates to: VKMVRIIPPHQNPGTRYPKGDCT*DRTILN
Trigger: ATTCAAGATGGTCCTGTCCCAGGTACAGTCCCCCTT...CGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp AACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGAACAGGAAGGGGGACTGTACCTaGGACAGGACCATCTTGAAT +
Preference number: 4 (lower is better)
Translates to: NAISVTRIQGQGFLPLNRKGDCT*DRTILN
Trigger: ATTCAAGATGGTCCTGTCCCAGGTACAGTCCCCCTT...CCTGTTCAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp AGGCTCCCAACTCCTCGTGCAGAGAAAGAAGTGGGAGGAGGGTGGTCACTAAATAAGGGGGACTGTACCTaGGACAGGACCATCTTGAAT +
Preference number: 4 (lower is better)
Translates to: RLPTPRAEKEVGGGWSLNKGDCT*DRTILN
Trigger: ATTCAAGATGGTCCTGTCCCAGGTACAGTCCCCCTT...ATTTAGTGACCACCCTCCTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp ATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGAACAGGATGTCCTTACACCAGGACCCAGATaGTGCAGCAGATCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: IRYQNSGPGLSSPEQDVLTPGPR*CSRSQR
Trigger: TCTTTGGGATCTGCTGCACCATCTGGGTCCTGGTGT...AAGGACATCCTGTTCAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTACACCAGGACCCAGATaGTGCAGCAGATCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: HIKTLERDIRYQNSGPGLTPGPR*CSRSQR
Trigger: TCTTTGGGATCTGCTGCACCATCTGGGTCCTGGTGT...AAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCACGAAGACAGCCAGGCTaGCTGCGATGCTGTAGATGC +
Preference number: 4 (lower is better)
Translates to: GSSHHIKTLERDIRYQNSRRQPG*LRCCRC
Trigger: GCATCTACAGCATCGCAGCCAGCCTGGCTGTCTTCG...TGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp AAAGCTGGCACTCAATGGGCATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGAATCACAACTGTTGGTaGTCCGGTGCAGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: KAGTQWASKGSTSVKMVRNHNCW*SGAAER
Trigger: CCTCTCAGCTGCACCGGACCACCAACAGTTGTGATT...CCGCACCATCTTCACTGATGTGCTTCCCTTTGATGCCCATTGAGTGCCAGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp TCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGTGGTCTGGTCTGGTCTaGTCACTCCTCCACATCCAC +
Preference number: 4 (lower is better)
Translates to: SSHHIKTLERDIRYQNSGWSGLV*SLLHIH
Trigger: GTGGATGTGGAGGAGTGACCAGACCAGACCAGACCA...CCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCTGGTCTGGTCTGGTCTaGTCACTCCTCCACATCCAC +
Preference number: 4 (lower is better)
Translates to: RIIPPHQNPGTRYPLPEFWSGLV*SLLHIH
Trigger: GTGGATGTGGAGGAGTGACCAGACCAGACCAGACCA...GAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp TCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCCTCTGGTCTGGTCTaGTCTGGTCTGGTCACTCCT +
Preference number: 4 (lower is better)
Translates to: SKGSTSVKMVRIIPPHQNPSGLV*SGLVTP
Trigger: AGGAGTGACCAGACCAGACCAGACCAGACCAGAGGG...GTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTGCTGGGGATGATAGTTaGTTAGGTCCACCCACCCTT +
Preference number: 4 (lower is better)
Translates to: HIKTLERDIRYQNSGPGLAGDDS*LGPPTL
Trigger: AAGGGTGGGTGGACCTAACCAACTATCATCCCCAGC...AAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp AAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCGCCCTTTCTGTCACCTaGAGAGAGTCATGCTGCACA +
Preference number: 4 (lower is better)
Translates to: KTLERDIRYQNSGPGLSSALSVT*RESCCT
Trigger: TGTGCAGCATGACTCTCTCCAGGTGACAGAAAGGGC...GGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp TCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTTGGGTTGCAGCTATGTaGGTCCAAACTCTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: SKPWNAISVTRIQGQGFLWVAAM*VQTLGP
Trigger: AGGGCCGAGAGTTTGGACCCACATAGCTGCAACCCA...AAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp GCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGAACAGGATGTTTTCATCAGCTCGTTaGCACCGTCAAACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: AISVTRIQGQGFLPLNRMFSSAR*HRQTGS
Trigger: ACTGCCTGTTTGACGGTGTCAACGAGCTGATGAAAA...CATCCTGTTCAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp AACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGAACAGGTTTTCATCAGCTCGTTaGCACCGTCAAACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: NAISVTRIQGQGFLPLNRFSSAR*HRQTGS
Trigger: ACTGCCTGTTTGACGGTGTCAACGAGCTGATGAAAA...CCTGTTCAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp ATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCCAAAGACTGCCAGGTTaGTCATGTAGATGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: IPPHQNPGTRYPLPEFRAQRLPG*SCRWRW
Trigger: CCACCTCCATCTACATGATCAACCTGGCAGTCTTTG...GGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp AAGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACCGCTTCCGTACATGCTaGCGAAGTAAAGGCACTCCA +
Preference number: 4 (lower is better)
Translates to: KHISEDGADHPTTSKPWNRFRTC*RSKGTP
Trigger: TGGAGTGCCTTTACTTCGTCAGCATGTACGGAAGCG...GTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp TTAAGCACATTGGTAGACCCAAGTGCACATGACGGGCATCACTCAACTCCACCACGCTTCCGTACATGCTaGCGAAGTAAAGGCACTCCA +
Preference number: 4 (lower is better)
Translates to: LSTLVDPSAHDGHHSTPPRFRTC*RSKGTP
Trigger: TGGAGTGCCTTTACTTCGTCAGCATGTACGGAAGCG...TGGTGGAGTTGAGTGATGCCCGTCATGTGCACTTGGGTCTACCAATGTGCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp CCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGTTGCTGTCATCTCAGTaGGGCTTTTGGCAACACAGT +
Preference number: 4 (lower is better)
Translates to: PTTSKPWNAISVTRIQGQLLSSQ*GFWQHS
Trigger: ACTGTGTTGCCAAAAGCCTCACTGAGATGACAGCAA...CTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR TCA 90 bp CGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCACTGGAAACTTGGGGTaGTCCATGCTACTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: RIIPPHQNPGTRYPLPEFTGNLG*SMLLAQ
Trigger: CTGGGCAAGTAGCATGGATCACCCCAAGTTTCCAGT...GAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR TCA 90 bp ATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGATGCCCCGTTGCATGTaGAAGTCTGGCTCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: IIPPHQNPGTRYPLPEFRMPRCM*KSGSLR
Trigger: TCTGAGGGAGCCAGACTTTCACATGCAACGGGGCAT...CCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp ATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCGTCCCTCCCTACATaGTCAGGTCCTCTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: IKGKHISEDGADHPTTSKPSLPT*SGPLSC
Trigger: ACAGCTGAGAGGACCTGATCATGTAGGGAGGGACGG...TTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp TCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCAGGCTGGCTGCGATaGTGTAGATGCAGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: SKGSTSVKMVRIIPPHQNPGWLR*CRCRLS
Trigger: AGAAAGCCTGCATCTACAGCATCGCAGCCAGCCTGG...GTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp AAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCAAGAAGCTGATGCTCTaGTTGGCTCTGCACTCTACG +
Preference number: 4 (lower is better)
Translates to: KTLERDIRYQNSGPGLSSKKLML*LALHST
Trigger: CGTAGAGTGCAGAGCCAAGCAGAGCATCAGCTTCTT...GGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp GATGGGTCAGGGGTCCCCAGGGCACACCCACAGGTCCATAGTTGTCACATCACAAAACACATGGACAATTaGAAGAAGAAGCTGATGCTC +
Preference number: 4 (lower is better)
Translates to: DGSGVPRAHPQVHSCHITKHMDN*KKKLML
Trigger: GAGCATCAGCTTCTTCTTGCAATTGTCCATGTGTTT...TGTGATGTGACAACTATGGACCTGTGGGTGTGCCCTGGGGACCCCTGACCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp GTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAAAACACCACCCCTTCTTaGTGTCATCTCAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: VRIIPPHQNPGTRYPLPENTTPS*CHLSEA
Trigger: AGCCTCACTGAGATGACAGCAAGAAGGGGTGGTGTT...TTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR GCA 90 bp ATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGAGGTGTACAGGGTaGCACTTGAACACAGCAACA +
Preference number: 4 (lower is better)
Translates to: IPPHQNPGTRYPLPEFRARRCTG*HLNTAT
Trigger: TGTTGCTGTGTTCAAGTGGCACCCTGTACACCTCCT...GGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR GCA 90 bp AGTTGTCACATCACACTGAGACTGCTGATACCCTCCAAGGACCTTCCTCTTACATGGGCCAGCTTGGGTTaGAGCTATGTGGGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: SCHITLRLLIPSKDLPLTWASLG*SYVGPN
Trigger: GTTTGGACCCACATAGCTGCAACCCAAGCTGGCCCA...TGTAAGAGGAAGGTCCTTGGAGGGTATCAGCAGTCTCAGTGTGATGTGACAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp TCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGAGCCCCACATTTTCCTaGGGTTACCTCCAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: SSHHIKTLERDIRYQNSGSPTFS*GYLQEG
Trigger: ACCTTCCTGGAGGTAACCCCAGGAAAATGTGGGGCT...CCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392039.2
CDS-3UTR CCA 90 bp GGCATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAACAGGCAGTCCCCACTaGTGTTTTGCTGACTCATGT +
Preference number: 4 (lower is better)
Translates to: GIKGKHISEDGADHPTTSTGSPH*CFADSC
Trigger: ACATGAGTCAGCAAAACACCAGTGGGGACTGCCTGT...TGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp TCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGTCATGTAGATGGAGGTaGCAGCATAATCGGGCCACC +
Preference number: 4 (lower is better)
Translates to: SSHHIKTLERDIRYQNSGSCRWR*QHNRAT
Trigger: GGTGGCCCGATTATGCTGCCACCTCCATCTACATGA...CCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp TTAAGCACATTGGTAGACCCAAGTGCACATGACGGGCATCACTCAACTCCACCATCATGTAGATGGAGGTaGCAGCATAATCGGGCCACC +
Preference number: 4 (lower is better)
Translates to: LSTLVDPSAHDGHHSTPPSCRWR*QHNRAT
Trigger: GGTGGCCCGATTATGCTGCCACCTCCATCTACATGA...TGGTGGAGTTGAGTGATGCCCGTCATGTGCACTTGGGTCTACCAATGTGCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp TCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACGCGGGAAGAAGACCTTaGCGCTCCAGGTATCATCAG +
Preference number: 4 (lower is better)
Translates to: SKGSTSVKMVRIIPPHQNAGRRP*RSRYHQ
Trigger: CTGATGATACCTGGAGCGCCAAGGTCTTCTTCCCGC...GTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGACCACATCAAAACCCTaGAACGCGATATCCGTTACC +
Preference number: 4 (lower is better)
Translates to: HISEDGADHPTTSKPWNATTSKP*NAISVT
Trigger: GGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGT...CGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGACCACATCAAAACCCTaGAACGCGATATCCGTTACC +
Preference number: 4 (lower is better)
Translates to: PTTSKPWNAISVTRIQGQTTSKP*NAISVT
Trigger: GGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGT...CTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp AAGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACAATCACAACTGTTGGTaGTCCGGTGCAGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: KHISEDGADHPTTSKPWNNHNCW*SGAAER
Trigger: CCTCTCAGCTGCACCGGACCACCAACAGTTGTGATT...GTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp AAAGCTGGCACTCAATGGGCATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGTTGAATCACAACTGTTaGTGGTCCGGTGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: KAGTQWASKGSTSVKMVRLNHNC*WSGAAE
Trigger: CTCAGCTGCACCGGACCACCAACAGTTGTGATTCAA...CCGCACCATCTTCACTGATGTGCTTCCCTTTGATGCCCATTGAGTGCCAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp AGGCTCCCAACTCCTCGTGCAGAGAAAGAAGTGGGAGGAGGGTGGTCACTAAATAAAGCTGGCACTCAATaGGCATCAAAGGGAAGCACA +
Preference number: 4 (lower is better)
Translates to: RLPTPRAEKEVGGGWSLNKAGTQ*ASKGST
Trigger: TGTGCTTCCCTTTGATGCCCATTGAGTGCCAGCTTT...ATTTAGTGACCACCCTCCTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GATGGGTCAGGGGTCCCCAGGGCACACCCACAGGTCCATAGTTGTCACATCACATATAATGAGCAAAGCTaGCACTCAATGGGCATCAAA +
Preference number: 4 (lower is better)
Translates to: DGSGVPRAHPQVHSCHITYNEQS*HSMGIK
Trigger: TTTGATGCCCATTGAGTGCCAGCTTTGCTCATTATA...TGTGATGTGACAACTATGGACCTGTGGGTGTGCCCTGGGGACCCCTGACCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGAATTCACCTGGTCTGTaGGTTCTTCAGAGATCCCTG +
Preference number: 4 (lower is better)
Translates to: HISEDGADHPTTSKPWNANSPGL*VLQRSL
Trigger: CAGGGATCTCTGAAGAACCCACAGACCAGGTGAATT...CGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGAACAGGATGAATTCACCTGGTCTGTaGGTTCTTCAGAGATCCCTG +
Preference number: 4 (lower is better)
Translates to: AISVTRIQGQGFLPLNRMNSPGL*VLQRSL
Trigger: CAGGGATCTCTGAAGAACCCACAGACCAGGTGAATT...CATCCTGTTCAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp TCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACTGGTCTGGTCTGGTCTaGTCTGGTCACTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: SKGSTSVKMVRIIPPHQNWSGLV*SGHSST
Trigger: TGTGGAGGAGTGACCAGACCAGACCAGACCAGACCA...GTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCATGGGTTGCAGCTATGTaGGTCCAAACTCTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: GSSHHIKTLERDIRYQNSWVAAM*VQTLGP
Trigger: AGGGCCGAGAGTTTGGACCCACATAGCTGCAACCCA...TGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp AACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGAACAGGCCACTGGTGTTTTGCTaGCTCATGTTTCTTCCTACA +
Preference number: 4 (lower is better)
Translates to: NAISVTRIQGQGFLPLNRPLVFC*LMFLPT
Trigger: TGTAGGAAGAAACATGAGTCAGCAAAACACCAGTGG...CCTGTTCAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp GAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTTTTTCATCAGCTCGTTaGCACCGTCAAACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: EDGADHPTTSKPWNAISVFSSAR*HRQTGS
Trigger: ACTGCCTGTTTGACGGTGTCAACGAGCTGATGAAAA...AACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp AAGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACCAAAGACTGCCAGGTTaGTCATGTAGATGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: KHISEDGADHPTTSKPWNQRLPG*SCRWRW
Trigger: CCACCTCCATCTACATGATCAACCTGGCAGTCTTTG...GTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp ACTGGAAAATGCAAGTCTGCTCTGTTCTGGGACACCCAAACTAAAAAGGGACTTGGGACAGGACCATCTTaGATGGGAGGGAGAGCACCA +
Preference number: 4 (lower is better)
Translates to: TGKCKSALFWDTQTKKGLGTGPS*MGGRAP
Trigger: TGGTGCTCTCCCTCCCATTCAAGATGGTCCTGTCCC...AAGTCCCTTTTTAGTTTGGGTGTCCCAGAACAGAGCAGACTTGCATTTTCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR TCA 90 bp AGTTGTCACATCACACTGAGACTGCTGATACCCTCCAAGGACCTTCCTCTTACACGCTTCCGTACATGCTaGCGAAGTAAAGGCACTCCA +
Preference number: 4 (lower is better)
Translates to: SCHITLRLLIPSKDLPLTRFRTC*RSKGTP
Trigger: TGGAGTGCCTTTACTTCGTCAGCATGTACGGAAGCG...TGTAAGAGGAAGGTCCTTGGAGGGTATCAGCAGTCTCAGTGTGATGTGACAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp CTGCCCAAGACACTCTCCCCAATAACTGACTCTCTTGGCTCCCTCCTTTACCTCGCAATTCATGCCCATTaGATCACAACTGTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LPKTLSPITDSLGSLLYLAIHAH*ITTVGG
Trigger: ACCACCAACAGTTGTGATTCAATGGGCATGAATTGC...GAGGTAAAGGAGGGAGCCAAGAGAGTCAGTTATTGGGGAGAGTGTCTTGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR TCA 90 bp TCAATGGGCATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCACCGAACCAAGGCAGGCCTaGTTCTTTGCCATTGTTTTC +
Preference number: 4 (lower is better)
Translates to: SMGIKGKHISEDGADHPTEPRQA*FFAIVF
Trigger: GAAAACAATGGCAAAGAATCAGGCCTGCCTTGGTTC...GGTGGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGATGCCCATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR TCA 90 bp GATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGTTGCTTTTCCTCCTaGAGACCTTGCTCACATGAA +
Preference number: 4 (lower is better)
Translates to: DGADHPTTSKPWNAISVTSCFSS*RPCSHE
Trigger: TTCATGTGAGCAAGGTCTTCAGGAGGAAAAGCAACT...GGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR TCA 90 bp TTGGACTTAGAAATCAGTAATTCACCTGGTCTGTGGGTTCTTCAGAGATCCCTGACCACCCGTAGACACTaGCCCGAACCAGCCCCAAAT +
Preference number: 4 (lower is better)
Translates to: LDLEISNSPGLWVLQRSLTTRRH*PEPAPN
Trigger: ATTTGGGGCTGGTTCGGGTCAGTGTCTACGGGTGGT...CAGGGATCTCTGAAGAACCCACAGACCAGGTGAATTACTGATTTCTAAGTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp CCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGCAGCAGGTCAAAGACTaGCAGGTTGATCATGTAGAT +
Preference number: 4 (lower is better)
Translates to: PTTSKPWNAISVTRIQGQQQVKD*QVDHVD
Trigger: ATCTACATGATCAACCTGGCAGTCTTTGACCTGCTG...CTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp CGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAAGAAGCTGATGCTCTaGTTGGCTCTGCACTCTACG +
Preference number: 4 (lower is better)
Translates to: RIIPPHQNPGTRYPLPEFKKLML*LALHST
Trigger: CGTAGAGTGCAGAGCCAAGCAGAGCATCAGCTTCTT...GAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp GTCCCCAGGGCACACCCACAGGTCCATAGTTGTCACATCACACTGAGACTGCTGAAACACATGGACAATTaGAAGAAGAAGCTGATGCTC +
Preference number: 4 (lower is better)
Translates to: VPRAHPQVHSCHITLRLLKHMDN*KKKLML
Trigger: GAGCATCAGCTTCTTCTTGCAATTGTCCATGTGTTT...CAGCAGTCTCAGTGTGATGTGACAACTATGGACCTGTGGGTGTGCCCTGGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp ATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAAACTTGGGGTGATCCATaGTACTTGCCCAGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: IKGKHISEDGADHPTTSKTWGDP*YLPSPN
Trigger: GTTGGGGCTGGGCAAGTAGCATGGATCACCCCAAGT...TTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR GCA 90 bp TGCAGAGAAAGAAGTGGGAGGAGGGTGGTCACTAAATCCACCACCCGTAGACACGCAGGCCTGATTCTTTaGCATTGTTTTCAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: CRERSGRRVVTKSTTRRHAGLIL*HCFQGS
Trigger: GCTTCCTTGAAAACAATGGCAAAGAATCAGGCCTGC...GTGTCTACGGGTGGTGGATTTAGTGACCACCCTCCTCCCACTTCTTTCTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR GCA 90 bp ACTGGAAAATGCAAGTCTGCTCTGTTCTGGGACACCCAAACTAAAAAGGGACTTACCCTTGTGCCTAGCTaGCTCATCTCCCTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: TGKCKSALFWDTQTKKGLTLVPS*LISLPA
Trigger: AGCTGGGAGGGAGATGAGGCAGCTAGGCACAAGGGT...AAGTCCCTTTTTAGTTTGGGTGTCCCAGAACAGAGCAGACTTGCATTTTCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp AACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGAACAGGTGGAGGCTGAGTGTTTaGGCTAGCTTAAGTGTCATA +
Preference number: 4 (lower is better)
Translates to: NAISVTRIQGQGFLPLNRWRLSV*ASLSVI
Trigger: TATGACACTTAAGCTAGCCCAAACACTCAGCCTCCA...CCTGTTCAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392039.2
CDS-3UTR CCA 90 bp TTAAGCACATTGGTAGACCCAAGTGCACATGACGGGCATCACTCAACTCCACCAACGAAGGTGGGGATGTaGACTGCAAACTGTAGGGTT +
Preference number: 4 (lower is better)
Translates to: LSTLVDPSAHDGHHSTPPTKVGM*TANCRV
Trigger: AACCCTACAGTTTGCAGTCCACATCCCCACCTTCGT...TGGTGGAGTTGAGTGATGCCCGTCATGTGCACTTGGGTCTACCAATGTGCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp ATGCAGGTGAGTAAGACAGCACCTCCTCCACCCTCCTATGGTGGAACCAAGGCACGTTGGAGAAACACATaGACAATTGCAAGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: MQVSKTAPPPPSYGGTKARWRNT*TIARRS
Trigger: GCTTCTTCTTGCAATTGTCCATGTGTTTCTCCAACG...TGCCTTGGTTCCACCATAGGAGGGTGGAGGAGGTGCTGTCTTACTCACCTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp GTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAAACCACATCAAAACCCTaGAACGCGATATCCGTTACC +
Preference number: 4 (lower is better)
Translates to: VRIIPPHQNPGTRYPLPETTSKP*NAISVT
Trigger: GGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGT...TTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp TCAATGGGCATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCACCACCACATCAAAACCCTaGAACGCGATATCCGTTACC +
Preference number: 4 (lower is better)
Translates to: SMGIKGKHISEDGADHPTTTSKP*NAISVT
Trigger: GGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGT...GGTGGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGATGCCCATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp TCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTTTGAATCACAACTGTTaGTGGTCCGGTGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: SKPWNAISVTRIQGQGFLLNHNC*WSGAAE
Trigger: CTCAGCTGCACCGGACCACCAACAGTTGTGATTCAA...AAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CTCCACATCCACTTCCACCCCTTCATTGACGCTCTCTTCCTCACCCTTCCCTCCTATAATGAGCAAAGCTaGCACTCAATGGGCATCAAA +
Preference number: 4 (lower is better)
Translates to: LHIHFHPFIDALFLTLPSYNEQS*HSMGIK
Trigger: TTTGATGCCCATTGAGTGCCAGCTTTGCTCATTATA...GGAGGGAAGGGTGAGGAAGAGAGCGTCAATGAAGGGGTGGAAGTGGATGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp AGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACAATTCACCTGGTCTGTaGGTTCTTCAGAGATCCCTG +
Preference number: 4 (lower is better)
Translates to: RWCGSSHHIKTLERDIRYNSPGL*VLQRSL
Trigger: CAGGGATCTCTGAAGAACCCACAGACCAGGTGAATT...GTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp TCAATGGGCATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCACCAGTCGAACAGGAAAATaGGGAGAGTTGGAAACAGCC +
Preference number: 4 (lower is better)
Translates to: SMGIKGKHISEDGADHPTSRTGK*GELETA
Trigger: GGCTGTTTCCAACTCTCCCCATTTTCCTGTTCGACT...GGTGGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGATGCCCATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp TTAAGCACATTGGTAGACCCAAGTGCACATGACGGGCATCACTCAACTCCACCAGGCTCACTGGAAACTTaGGGTGATCCATGCTACTTG +
Preference number: 4 (lower is better)
Translates to: LSTLVDPSAHDGHHSTPPGSLET*GDPCYL
Trigger: CAAGTAGCATGGATCACCCCAAGTTTCCAGTGAGCC...TGGTGGAGTTGAGTGATGCCCGTCATGTGCACTTGGGTCTACCAATGTGCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp GTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAACTTTCTGAGGCTCACTaGAAACTTGGGGTGATCCAT +
Preference number: 4 (lower is better)
Translates to: VRIIPPHQNPGTRYPLPELSEAH*KLGVIH
Trigger: ATGGATCACCCCAAGTTTCCAGTGAGCCTCAGAAAG...TTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp AAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCTTGCATGTGAAAGTCTaGCTCCCTCAGAGTATCACG +
Preference number: 4 (lower is better)
Translates to: KTLERDIRYQNSGPGLSSLHVKV*LPQSIT
Trigger: CGTGATACTCTGAGGGAGCCAGACTTTCACATGCAA...GGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp ATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCCTTTCTGTCACCTaGAGAGAGTCATGCTGCACA +
Preference number: 4 (lower is better)
Translates to: IIPPHQNPGTRYPLPEFRALSVT*RESCCT
Trigger: TGTGCAGCATGACTCTCTCCAGGTGACAGAAAGGGC...CCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp GTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAACCACTGGTGTTTTGCTaGCTCATGTTTCTTCCTACA +
Preference number: 4 (lower is better)
Translates to: VRIIPPHQNPGTRYPLPEPLVFC*LMFLPT
Trigger: TGTAGGAAGAAACATGAGTCAGCAAAACACCAGTGG...TTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp AGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCCCACTGGTGTTTTGCTaGCTCATGTTTCTTCCTACA +
Preference number: 4 (lower is better)
Translates to: SEDGADHPTTSKPWNAISPLVFC*LMFLPT
Trigger: TGTAGGAAGAAACATGAGTCAGCAAAACACCAGTGG...GGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp ATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGCAAAGACTGCCAGGTTaGTCATGTAGATGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: IIPPHQNPGTRYPLPEFRQRLPG*SCRWRW
Trigger: CCACCTCCATCTACATGATCAACCTGGCAGTCTTTG...CCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp TTGGACTTAGAAATCAGTAATTCACCTGGTCTGTGGGTTCTTCAGAGATCCCTGAAGGCCGGTGGGCCCTaGTGTTCATGCGGAATTCTT +
Preference number: 4 (lower is better)
Translates to: LDLEISNSPGLWVLQRSLKAGGP*CSCGIL
Trigger: AAGAATTCCGCATGAACATCAGGGCCCACCGGCCTT...CAGGGATCTCTGAAGAACCCACAGACCAGGTGAATTACTGATTTCTAAGTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp TCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGTTCTTCAGAGATCCCTaGACACTGGGTGGTATAAGC +
Preference number: 4 (lower is better)
Translates to: SSHHIKTLERDIRYQNSGFFRDP*TLGGIS
Trigger: GCTTATACCACCCAGTGTTCAGGGATCTCTGAAGAA...CCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp AGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGAAGCCATCCAGGCGTaGCTCAATTGTTTACAGTTT +
Preference number: 4 (lower is better)
Translates to: SEDGADHPTTSKPWNAISEAIQA*LNCLQF
Trigger: AAACTGTAAACAATTGAGTCACGCCTGGATGGCTTC...GGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR TCA 90 bp CACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTAGTTGCTTTTCCTCCTaGAGACCTTGCTCACATGAA +
Preference number: 4 (lower is better)
Translates to: HIKTLERDIRYQNSGPGLSCFSS*RPCSHE
Trigger: TTCATGTGAGCAAGGTCTTCAGGAGGAAAAGCAACT...AAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR TCA 90 bp TTGGACTTAGAAATCAGTAATTCACCTGGTCTGTGGGTTCTTCAGAGATCCCTGAGACCCAAGTGCACATaGCGGGCATCACTCAACTCC +
Preference number: 4 (lower is better)
Translates to: LDLEISNSPGLWVLQRSLRPKCT*RASLNS
Trigger: GGAGTTGAGTGATGCCCGTCATGTGCACTTGGGTCT...CAGGGATCTCTGAAGAACCCACAGACCAGGTGAATTACTGATTTCTAAGTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp GTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAACAGCAGGTCAAAGACTaGCAGGTTGATCATGTAGAT +
Preference number: 4 (lower is better)
Translates to: VRIIPPHQNPGTRYPLPEQQVKD*QVDHVD
Trigger: ATCTACATGATCAACCTGGCAGTCTTTGACCTGCTG...TTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp AAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTATGGAAAATGCAAGTCTaGTCTGTTCTGGGACACCCA +
Preference number: 4 (lower is better)
Translates to: KMVRIIPPHQNPGTRYPLWKMQV*SVLGHP
Trigger: TGGGTGTCCCAGAACAGAGCAGACTTGCATTTTCCA...TAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR GCA 90 bp AGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGCAGGCCTGATTCTTTaGCATTGTTTTCAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: SEDGADHPTTSKPWNAISAGLIL*HCFQGS
Trigger: GCTTCCTTGAAAACAATGGCAAAGAATCAGGCCTGC...GGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp GGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAACGAAGGTGGGGATGTaGACTGCAAACTGTAGGGTT +
Preference number: 4 (lower is better)
Translates to: GSSHHIKTLERDIRYQNSTKVGM*TANCRV
Trigger: AACCCTACAGTTTGCAGTCCACATCCCCACCTTCGT...TGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GATAAGATTTTATGTTTGAACATCGCTGGGGATGATAGTTGGTTAGGTCCACCCGTAGCGGGTAACGGATaGCCAAGAACCGGTCCATGC +
Preference number: 4 (lower is better)
Translates to: DKILCLNIAGDDSWLGPPVAGNG*PRTGPC
Trigger: GCATGGACCGGTTCTTGGCCATCCGTTACCCGCTAC...GGGTGGACCTAACCAACTATCATCCCCAGCGATGTTCAAACATAAAATCTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGCGTTGGAGAAACACATaGACAATTGCAAGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: HISEDGADHPTTSKPWNARWRNT*TIARRS
Trigger: GCTTCTTCTTGCAATTGTCCATGTGTTTCTCCAACG...CGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GAGAAGCCATCCAGGCGTGACTCAATTGTTTACAGTTTCCTGGGACCAGCAGGGCGTTGGAGAAACACATaGACAATTGCAAGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: EKPSRRDSIVYSFLGPAGRWRNT*TIARRS
Trigger: GCTTCTTCTTGCAATTGTCCATGTGTTTCTCCAACG...CCCTGCTGGTCCCAGGAAACTGTAAACAATTGAGTCACGCCTGGATGGCTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp TGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGAACCGTTGGAGAAACACATaGACAATTGCAAGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: WNAISVTRIQGQGFLPLNRWRNT*TIARRS
Trigger: GCTTCTTCTTGCAATTGTCCATGTGTTTCTCCAACG...GTTCAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCATTGAATCACAACTGTTaGTGGTCCGGTGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: GSSHHIKTLERDIRYQNSLNHNC*WSGAAE
Trigger: CTCAGCTGCACCGGACCACCAACAGTTGTGATTCAA...TGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp AAGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACAGTCGAACAGGAAAATaGGGAGAGTTGGAAACAGCC +
Preference number: 4 (lower is better)
Translates to: KHISEDGADHPTTSKPWNSRTGK*GELETA
Trigger: GGCTGTTTCCAACTCTCCCCATTTTCCTGTTCGACT...GTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp AAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTAAGTCGAACAGGAAAATaGGGAGAGTTGGAAACAGCC +
Preference number: 4 (lower is better)
Translates to: KMVRIIPPHQNPGTRYPLSRTGK*GELETA
Trigger: GGCTGTTTCCAACTCTCCCCATTTTCCTGTTCGACT...TAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGAAGTCTGCTCTGTTCTaGGACACCCAAACTAAAAAG +
Preference number: 4 (lower is better)
Translates to: VKMVRIIPPHQNPGTRYPKSALF*DTQTKK
Trigger: CTTTTTAGTTTGGGTGTCCCAGAACAGAGCAGACTT...CGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp AAGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACTTGCATGTGAAAGTCTaGCTCCCTCAGAGTATCACG +
Preference number: 4 (lower is better)
Translates to: KHISEDGADHPTTSKPWNLHVKV*LPQSIT
Trigger: CGTGATACTCTGAGGGAGCCAGACTTTCACATGCAA...GTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCTTGCATGTGAAAGTCTaGCTCCCTCAGAGTATCACG +
Preference number: 4 (lower is better)
Translates to: RIIPPHQNPGTRYPLPEFLHVKV*LPQSIT
Trigger: CGTGATACTCTGAGGGAGCCAGACTTTCACATGCAA...GAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
3UTR CAA 72 bp CCAGAACCTCCCAGTCGAACAGGAAAATGGGGAGAGTaGGAAACAGCCTTGTTGACATGGTCTCATTCTCTT +
Preference number: 4 (lower is better)
Translates to: PEPPSRTGKWGE*ETALLTWSHSL
Trigger: AAGAGAATGAGACCATGTCAACAAGGCTGTTTCCAACTCTCCCCATTTTCCTGTTCGACTGGGAGGTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp AAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTAGCAATTCATGCCCATTaGATCACAACTTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: KMVRIIPPHQNPGTRYPLAIHAH*ITTSRS
Trigger: GCTTCTGGAAGTTGTGATTCAATGGGCATGAATTGC...TAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392039.2
CDS-3UTR TCA 90 bp AAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCACTGGTGTTTTGCTaGCTCATGTTTCTTCCTACA +
Preference number: 4 (lower is better)
Translates to: KMVRIIPPHQNPGTRYPLPLVFC*LMFLPT
Trigger: TGTAGGAAGAAACATGAGTCAGCAAAACACCAGTGG...TAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp TCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCACTGGTGTTTTGCTaGCTCATGTTTCTTCCTACA +
Preference number: 4 (lower is better)
Translates to: SKPWNAISVTRIQGQGFLPLVFC*LMFLPT
Trigger: TGTAGGAAGAAACATGAGTCAGCAAAACACCAGTGG...AAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp TTGGACTTAGAAATCAGTAATTCACCTGGTCTGTGGGTTCTTCAGAGATCCCTGAGGGAAGCACATCAGTaGAGATGGTGCGGATCATCC +
Preference number: 4 (lower is better)
Translates to: LDLEISNSPGLWVLQRSLREAHQ*RWCGSS
Trigger: GGATGATCCGCACCATCTTCACTGATGTGCTTCCCT...CAGGGATCTCTGAAGAACCCACAGACCAGGTGAATTACTGATTTCTAAGTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp CACTCAATGGGCATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCTGGAAACAGCCTTGTTaGCATGGTCTCATTCTCTTT +
Preference number: 4 (lower is better)
Translates to: HSMGIKGKHISEDGADHPWKQPC*HGLILF
Trigger: AAAGAGAATGAGACCATGTCAACAAGGCTGTTTCCA...GGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGATGCCCATTGAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp ACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATGGAAACAGCCTTGTTaGCATGGTCTCATTCTCTTT +
Preference number: 4 (lower is better)
Translates to: TSVKMVRIIPPHQNPGTRWKQPC*HGLILF
Trigger: AAAGAGAATGAGACCATGTCAACAAGGCTGTTTCCA...TCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp GATAAGATTTTATGTTTGAACATCGCTGGGGATGATAGTTGGTTAGGTCCACCCCCAGGCTGGCTGCGATaGTGTAGATGCAGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: DKILCLNIAGDDSWLGPPPGWLR*CRCRLS
Trigger: AGAAAGCCTGCATCTACAGCATCGCAGCCAGCCTGG...GGGTGGACCTAACCAACTATCATCCCCAGCGATGTTCAAACATAAAATCTTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp ATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAAAAGAAGCTGATGCTCTaGTTGGCTCTGCACTCTACG +
Preference number: 4 (lower is better)
Translates to: IKGKHISEDGADHPTTSKKKLML*LALHST
Trigger: CGTAGAGTGCAGAGCCAAGCAGAGCATCAGCTTCTT...TTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGAT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp ACACTGAGACTGCTGATACCCTCCAAGGACCTTCCTCTTACAGCCATGCAGCTCTCACACAGCAATTCATaGCCATTGAATCACAACTGT +
Preference number: 4 (lower is better)
Translates to: TLRLLIPSKDLPLTAMQLSHSNS*PLNHNC
Trigger: ACAGTTGTGATTCAATGGGCATGAATTGCTGTGTGA...GAGCTGCATGGCTGTAAGAGGAAGGTCCTTGGAGGGTATCAGCAGTCTCAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GATAAGATTTTATGTTTGAACATCGCTGGGGATGATAGTTGGTTAGGTCCACCCAAGGTGCTGAAGCCATaGATGGCCAGCAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: DKILCLNIAGDDSWLGPPKVLKP*MASRLR
Trigger: CCTCAACCTGCTGGCCATCCATGGCTTCAGCACCTT...GGGTGGACCTAACCAACTATCATCCCCAGCGATGTTCAAACATAAAATCTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp TCAATGGGCATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCACCCGTTGGAGAAACACATaGACAATTGCAAGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: SMGIKGKHISEDGADHPTRWRNT*TIARRS
Trigger: GCTTCTTCTTGCAATTGTCCATGTGTTTCTCCAACG...GGTGGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGATGCCCATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp CTCCCAACTCCTCGTGCAGAGAAAGAAGTGGGAGGAGGGTGGTCACTAAATCCAAAAACCACCCCACAATaGATCCTTCTCATCATTTCA +
Preference number: 4 (lower is better)
Translates to: LPTPRAEKEVGGGWSLNPKTTPQ*ILLIIS
Trigger: TGAAATGATGAGAAGGATCCATTGTGGGGTGGTTTT...TGGATTTAGTGACCACCCTCCTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR TCA 90 bp TGCAGAGAAAGAAGTGGGAGGAGGGTGGTCACTAAATCCACCACCCGTAGACACTTCACTCTCTTGAAGTaGTGGATTCAAATGACTTTG +
Preference number: 4 (lower is better)
Translates to: CRERSGRRVVTKSTTRRHFTLLK*WIQMTL
Trigger: CAAAGTCATTTGAATCCATCACTTCAAGAGAGTGAA...GTGTCTACGGGTGGTGGATTTAGTGACCACCCTCCTCCCACTTCTTTCTCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp CACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCACACAGCAATTCATaGCCATTGAATCACAACTTC +
Preference number: 4 (lower is better)
Translates to: HIKTLERDIRYQNSGPGLSHSNS*PLNHNF
Trigger: GAAGTTGTGATTCAATGGGCATGAATTGCTGTGTGA...AAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392039.2
CDS-3UTR GCA 90 bp AGTTGTCACATCACACTGAGACTGCTGATACCCTCCAAGGACCTTCCTCTTACACAGCAGGTCAAAGACTaGCAGGTTGATCATGTAGAT +
Preference number: 4 (lower is better)
Translates to: SCHITLRLLIPSKDLPLTQQVKD*QVDHVD
Trigger: ATCTACATGATCAACCTGGCAGTCTTTGACCTGCTG...TGTAAGAGGAAGGTCCTTGGAGGGTATCAGCAGTCTCAGTGTGATGTGACAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp ATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGCAGCAGGTCAAAGACTaGCAGGTTGATCATGTAGAT +
Preference number: 4 (lower is better)
Translates to: IIPPHQNPGTRYPLPEFRQQVKD*QVDHVD
Trigger: ATCTACATGATCAACCTGGCAGTCTTTGACCTGCTG...CCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp GTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAAAAACACATGGACAATTaGAAGAAGAAGCTGATGCTC +
Preference number: 4 (lower is better)
Translates to: VRIIPPHQNPGTRYPLPEKHMDN*KKKLML
Trigger: GAGCATCAGCTTCTTCTTGCAATTGTCCATGTGTTT...TTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp GGCATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCATCACACAGCAATTCATaGCCATTGAATCACAACTGT +
Preference number: 4 (lower is better)
Translates to: GIKGKHISEDGADHPTTSSHSNS*PLNHNC
Trigger: ACAGTTGTGATTCAATGGGCATGAATTGCTGTGTGA...TGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp GATAAGATTTTATGTTTGAACATCGCTGGGGATGATAGTTGGTTAGGTCCACCCCGAACCAGCCCCAAATaGCCCGTTGCATGTGAAAGT +
Preference number: 4 (lower is better)
Translates to: DKILCLNIAGDDSWLGPPRTSPK*PVACES
Trigger: ACTTTCACATGCAACGGGGCATTTGGGGCTGGTTCG...GGGTGGACCTAACCAACTATCATCCCCAGCGATGTTCAAACATAAAATCTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp AGAGTCATGCTGCACATAGATAAGATTTTATGTTTGAACATCGCTGGGGATGATTCCCAAAGATCTTCCTaGGGGACCGGAGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: RVMLHIDKILCLNIAGDDSQRSS*GTGGGS
Trigger: TGAGCCACCTCCGGTCCCCCAGGAAGATCTTTGGGA...ATCATCCCCAGCGATGTTCAAACATAAAATCTTATCTATGTGCAGCATGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp AGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGTATAATGAGCAAAGCTaGCACTCAATGGGCATCAAA +
Preference number: 4 (lower is better)
Translates to: STSVKMVRIIPPHQNPGTYNEQS*HSMGIK
Trigger: TTTGATGCCCATTGAGTGCCAGCTTTGCTCATTATA...CGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp GATAAGATTTTATGTTTGAACATCGCTGGGGATGATAGTTGGTTAGGTCCACCCTCCCTGAACACTGGGTaGTATAAGCTGTCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: DKILCLNIAGDDSWLGPPSLNTG*YKLSGQ
Trigger: CTGCCCAGACAGCTTATACCACCCAGTGTTCAGGGA...GGGTGGACCTAACCAACTATCATCCCCAGCGATGTTCAAACATAAAATCTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp GAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTTTCACTCTCTTGAAGTaGTGGATTCAAATGACTTTG +
Preference number: 4 (lower is better)
Translates to: EDGADHPTTSKPWNAISVFTLLK*WIQMTL
Trigger: CAAAGTCATTTGAATCCATCACTTCAAGAGAGTGAA...AACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp AAAGCTGGCACTCAATGGGCATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGTCACAAGGCATCACATaGATCTATTTATTTGGCGAA +
Preference number: 4 (lower is better)
Translates to: KAGTQWASKGSTSVKMVRSQGIT*IYLFGE
Trigger: TTCGCCAAATAAATAGATTCATGTGATGCCTTGTGA...CCGCACCATCTTCACTGATGTGCTTCCCTTTGATGCCCATTGAGTGCCAGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444078.5
CDS-3UTR GCA 90 bp AGAGTCATGCTGCACATAGATAAGATTTTATGTTTGAACATCGCTGGGGATGATCTGCGATGCTGTAGATaGAGGCTTTCTGCTGCACCC +
Preference number: 4 (lower is better)
Translates to: RVMLHIDKILCLNIAGDDLRCCR*RLSAAP
Trigger: GGGTGCAGCAGAAAGCCTGCATCTACAGCATCGCAG...ATCATCCCCAGCGATGTTCAAACATAAAATCTTATCTATGTGCAGCATGACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp TCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTAAACACATGGACAATTaGAAGAAGAAGCTGATGCTC +
Preference number: 4 (lower is better)
Translates to: SKPWNAISVTRIQGQGFLKHMDN*KKKLML
Trigger: GAGCATCAGCTTCTTCTTGCAATTGTCCATGTGTTT...AAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp TTAAGCACATTGGTAGACCCAAGTGCACATGACGGGCATCACTCAACTCCACCAAAACACATGGACAATTaGAAGAAGAAGCTGATGCTC +
Preference number: 4 (lower is better)
Translates to: LSTLVDPSAHDGHHSTPPKHMDN*KKKLML
Trigger: GAGCATCAGCTTCTTCTTGCAATTGTCCATGTGTTT...TGGTGGAGTTGAGTGATGCCCGTCATGTGCACTTGGGTCTACCAATGTGCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CCA 90 bp TTGGACTTAGAAATCAGTAATTCACCTGGTCTGTGGGTTCTTCAGAGATCCCTGCTTTCTGAGGCTCACTaGAAACTTGGGGTGATCCAT +
Preference number: 4 (lower is better)
Translates to: LDLEISNSPGLWVLQRSLLSEAH*KLGVIH
Trigger: ATGGATCACCCCAAGTTTCCAGTGAGCCTCAGAAAG...CAGGGATCTCTGAAGAACCCACAGACCAGGTGAATTACTGATTTCTAAGTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp CGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAAAACCACCCCACAATaGATCCTTCTCATCATTTCA +
Preference number: 4 (lower is better)
Translates to: RIIPPHQNPGTRYPLPEFKTTPQ*ILLIIS
Trigger: TGAAATGATGAGAAGGATCCATTGTGGGGTGGTTTT...GAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR TCA 90 bp AGAGTCATGCTGCACATAGATAAGATTTTATGTTTGAACATCGCTGGGGATGATACTCTCCCCAATAACTaGCTCTCTTGGCTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: RVMLHIDKILCLNIAGDDTLPNN*LSWLPP
Trigger: AGGAGGGAGCCAAGAGAGTCAGTTATTGGGGAGAGT...ATCATCCCCAGCGATGTTCAAACATAAAATCTTATCTATGTGCAGCATGACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR GCA 90 bp AGTTGTCACATCACACTGAGACTGCTGATACCCTCCAAGGACCTTCCTCTTACATCACACAGCAATTCATaGCCATTGAATCACAACTGT +
Preference number: 4 (lower is better)
Translates to: SCHITLRLLIPSKDLPLTSHSNS*PLNHNC
Trigger: ACAGTTGTGATTCAATGGGCATGAATTGCTGTGTGA...TGTAAGAGGAAGGTCCTTGGAGGGTATCAGCAGTCTCAGTGTGATGTGACAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR GCA 90 bp GATAAGATTTTATGTTTGAACATCGCTGGGGATGATAGTTGGTTAGGTCCACCCTGGAAAATGCAAGTCTaGTCTGTTCTGGGACACCCA +
Preference number: 4 (lower is better)
Translates to: DKILCLNIAGDDSWLGPPWKMQV*SVLGHP
Trigger: TGGGTGTCCCAGAACAGAGCAGACTTGCATTTTCCA...GGGTGGACCTAACCAACTATCATCCCCAGCGATGTTCAAACATAAAATCTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CCA 90 bp AGAGTCATGCTGCACATAGATAAGATTTTATGTTTGAACATCGCTGGGGATGATGATTATGGGCCAGCTTaGGTTGCAGCTATGTGGGTC +
Preference number: 4 (lower is better)
Translates to: RVMLHIDKILCLNIAGDDDYGPA*VAAMWV
Trigger: GACCCACATAGCTGCAACCCAAGCTGGCCCATAATC...ATCATCCCCAGCGATGTTCAAACATAAAATCTTATCTATGTGCAGCATGACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp TCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACTTCACTCTCTTGAAGTaGTGGATTCAAATGACTTTG +
Preference number: 4 (lower is better)
Translates to: SKGSTSVKMVRIIPPHQNFTLLK*WIQMTL
Trigger: CAAAGTCATTTGAATCCATCACTTCAAGAGAGTGAA...GTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp AGAGTCATGCTGCACATAGATAAGATTTTATGTTTGAACATCGCTGGGGATGATCTTCCTTCACCTTTCTaGGGCTCACTGGAAACTTGG +
Preference number: 4 (lower is better)
Translates to: RVMLHIDKILCLNIAGDDLPSPF*GSLETW
Trigger: CCAAGTTTCCAGTGAGCCTCAGAAAGGTGAAGGAAG...ATCATCCCCAGCGATGTTCAAACATAAAATCTTATCTATGTGCAGCATGACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR TCA 90 bp AGAGTCATGCTGCACATAGATAAGATTTTATGTTTGAACATCGCTGGGGATGATTTGCTGTCATCTCAGTaGGGCTTTTGGCAACACAGT +
Preference number: 4 (lower is better)
Translates to: RVMLHIDKILCLNIAGDDLLSSQ*GFWQHS
Trigger: ACTGTGTTGCCAAAAGCCTCACTGAGATGACAGCAA...ATCATCCCCAGCGATGTTCAAACATAAAATCTTATCTATGTGCAGCATGACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
3UTR CAA 72 bp GAGAGAGTCATGCTGCACATAGATAAGATTTTATGTTaGAACATCGCTGGGGATGATAGTTGGTTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: ERVMLHIDKILC*NIAGDDSWLGP
Trigger: TGGACCTAACCAACTATCATCCCCAGCGATGTTCAAACATAAAATCTTATCTATGTGCAGCATGACTCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR TCA 90 bp AGAGTCATGCTGCACATAGATAAGATTTTATGTTTGAACATCGCTGGGGATGATGAAGCCATCCAGGCGTaGCTCAATTGTTTACAGTTT +
Preference number: 4 (lower is better)
Translates to: RVMLHIDKILCLNIAGDDEAIQA*LNCLQF
Trigger: AAACTGTAAACAATTGAGTCACGCCTGGATGGCTTC...ATCATCCCCAGCGATGTTCAAACATAAAATCTTATCTATGTGCAGCATGACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS CCA 90 bp TGCTGCACCCAGTCCTGGGTGTGGTCTCGGCGGCCCAGCAGGATGTaGATGCTCCTGGAGCAGCAGAAGCCCATGATGCCCATGGGAAGG +
Preference number: 5 (lower is better)
Translates to: CCTQSWVWSRRPSRM*MLLEQQKPMMPMGR
Trigger: CCTTCCCATGGGCATCATGGGCTTCTGCTGCTCCAGGAGCATCCACATCCTGCTGGGCCGCCGAGACCACACCCAGGACTGGGTGCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000438398.1
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp GGGTCCAAACTCTCGGCCCTCCTGCCGAGCAGCCGTAGTGGCCTGCAGCATGGAGGAGCAGCTGAGTCATaGGGAGGCTTCCGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: GSKLSALLPSSRSGLQHGGAAES*GGFRCH
Trigger: GTGACAGCGGAAGCCTCCCAATGACTCAGCTGCTCC...TCCATGCTGCAGGCCACTACGGCTGCTCGGCAGGAGGGCCGAGAGTTTGGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CAA 90 bp AGCCGTAGTGGCCTGCAGCATGGACCTGTGCCCGCTCCCACAGACACGGGTCCCGCCCCAAATGCCCCGTaGCATGTGAAAGTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: SRSGLQHGPVPAPTDTGPAPNAP*HVKVWL
Trigger: GAGCCAGACTTTCACATGCAACGGGGCATTTGGGGC...GGGACCCGTGTCTGTGGGAGCGGGCACAGGTCCATGCTGCAGGCCACTACGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS GCA 90 bp GGAAGGAGACCACGAAGACAGCCAGGCTGGCTGCGATGCTGTAGATaGAGGCTTTCTGCTGCACCCAGTCCTGGGTGTGGTCTCGGCGGC +
Preference number: 5 (lower is better)
Translates to: GRRPRRQPGWLRCCR*RLSAAPSPGCGLGG
Trigger: GCCGCCGAGACCACACCCAGGACTGGGTGCAGCAGAAAGCCTGCATCTACAGCATCGCAGCCAGCCTGGCTGTCTTCGTGGTCTCCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000438398.1
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp CACATGACGGGCATCACTCAACTCCACCAGGCAGGCTCCCAACTCCTCGTGCAGTGGATGGCCAGCAGGTaGAGGAGCAGGCCCAGGACG +
Preference number: 5 (lower is better)
Translates to: HMTGITQLHQAGSQLLVQWMASR*RSRPRT
Trigger: CGTCCTGGGCCTGCTCCTCAACCTGCTGGCCATCCA...CTGCACGAGGAGTTGGGAGCCTGCCTGGTGGAGTTGAGTGATGCCCGTCATGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp TGCCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCACAGGGTGATCCATGCTACTaGCCCAGCCCCAACACCACC +
Preference number: 5 (lower is better)
Translates to: CPLPQTRVPTEKRPFFPQGDPCY*PSPNTT
Trigger: GGTGGTGTTGGGGCTGGGCAAGTAGCATGGATCACC...CTGTGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CAA 90 bp AGCCGTAGTGGCCTGCAGCATGGACCTGTGCCCGCTCCCACAGACACGGGTCCCACTTCCACCCCTTCATaGACGCTCTCTTCCTCACCC +
Preference number: 5 (lower is better)
Translates to: SRSGLQHGPVPAPTDTGPTSTPS*TLSSSP
Trigger: GGGTGAGGAAGAGAGCGTCAATGAAGGGGTGGAAGT...GGGACCCGTGTCTGTGGGAGCGGGCACAGGTCCATGCTGCAGGCCACTACGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS GCA 90 bp GGACTGGGAGGAAGGAGACCACGAAGACAGCCAGGCTGGCTGCGATaGTGTAGATGCAGGCTTTCTGCTGCACCCAGTCCTGGGTGTGGT +
Preference number: 5 (lower is better)
Translates to: GLGGRRPRRQPGWLR*CRCRLSAAPSPGCG
Trigger: ACCACACCCAGGACTGGGTGCAGCAGAAAGCCTGCATCTACAGCATCGCAGCCAGCCTGGCTGTCTTCGTGGTCTCCTTCCTCCCAGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp GATTATGGGCCAGCTTGGGTTGCAGCTATGTGGGTCCAAACTCTCGGCCCTCCTTGGATGGCCAGCAGGTaGAGGAGCAGGCCCAGGACG +
Preference number: 5 (lower is better)
Translates to: DYGPAWVAAMWVQTLGPPWMASR*RSRPRT
Trigger: CGTCCTGGGCCTGCTCCTCAACCTGCTGGCCATCCA...AGGAGGGCCGAGAGTTTGGACCCACATAGCTGCAACCCAAGCTGGCCCATAATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp AGCCGTAGTGGCCTGCAGCATGGACCTGTGCCCGCTCCCACAGACACGGGTCCCAAGCTGATGCTCTGCTaGGCTCTGCACTCTACGATA +
Preference number: 5 (lower is better)
Translates to: SRSGLQHGPVPAPTDTGPKLMLC*ALHSTI
Trigger: TATCGTAGAGTGCAGAGCCAAGCAGAGCATCAGCTT...GGGACCCGTGTCTGTGGGAGCGGGCACAGGTCCATGCTGCAGGCCACTACGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp AGCATGGACCTGTGCCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCACATCCAGGCAGCAGTaGACGTTGGAGAAACACATG +
Preference number: 5 (lower is better)
Translates to: SMDLCPLPQTRVPTEKRPTSRQQ*TLEKHM
Trigger: CATGTGTTTCTCCAACGTCAACTGCTGCCTGGATGT...GGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCACAGGTCCATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp AGCCGTAGTGGCCTGCAGCATGGACCTGTGCCCGCTCCCACAGACACGGGTCCCCCAGGCGTGACTCAATaGTTTACAGTTTCCTGGGAC +
Preference number: 5 (lower is better)
Translates to: SRSGLQHGPVPAPTDTGPPGVTQ*FTVSWD
Trigger: GTCCCAGGAAACTGTAAACAATTGAGTCACGCCTGG...GGGACCCGTGTCTGTGGGAGCGGGCACAGGTCCATGCTGCAGGCCACTACGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CAA 90 bp GTCCTGGCTCCCCTCCCCGTCCCTCCCTACATGATCAGGTCCTCTCAGCTGTCTGCCCCAAATGCCCCGTaGCATGTGAAAGTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: VLAPLPVPPYMIRSSQLSAPNAP*HVKVWL
Trigger: GAGCCAGACTTTCACATGCAACGGGGCATTTGGGGC...AGACAGCTGAGAGGACCTGATCATGTAGGGAGGGACGGGGAGGGGAGCCAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS TCA 90 bp TGCACAGGGACGGGAAGGGGGACTGTACCTGGGACAGGACCATCTTaGATGGGAGGGAGAGCACCAGCAGCAGGTCAAAGACTGCCAGGT +
Preference number: 5 (lower is better)
Translates to: CTGTGRGTVPGTGPS*MGGRAPAAGQRLPG
Trigger: ACCTGGCAGTCTTTGACCTGCTGCTGGTGCTCTCCCTCCCATTCAAGATGGTCCTGTCCCAGGTACAGTCCCCCTTCCCGTCCCTGTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000438398.1
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp CCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCACAGTGTCCCCACTCAGTCATTTaGCAGTCTTCTCACGGGCAC +
Preference number: 5 (lower is better)
Translates to: PLPQTRVPTEKRPFFPQCPHSVI*QSSHGH
Trigger: GTGCCCGTGAGAAGACTGCAAAATGACTGAGTGGGG...ACACTGTGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CAA 90 bp TGCCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCACAGCCAGGCGTGACTCAATaGTTTACAGTTTCCTGGGAC +
Preference number: 5 (lower is better)
Translates to: CPLPQTRVPTEKRPFFPQPGVTQ*FTVSWD
Trigger: GTCCCAGGAAACTGTAAACAATTGAGTCACGCCTGG...CTGTGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CAA 90 bp ACTCAACTCCACCAGGCAGGCTCCCAACTCCTCGTGCAGAGAAAGAAGTGGGAGGGAGCAGCTGAGTCATaGGGAGGCTTCCGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: TQLHQAGSQLLVQRKKWEGAAES*GGFRCH
Trigger: GTGACAGCGGAAGCCTCCCAATGACTCAGCTGCTCC...CTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAGCCTGCCTGGTGGAGTTGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CAA 90 bp GGAGGAGGGTGGTCACTAAATCCACCACCCGTAGACACTGACCCGAACCAGCCCTCTTTCCACAGTGTTTaGGGATGGGTCAGGGGTCCC +
Preference number: 5 (lower is better)
Translates to: GGGWSLNPPPVDTDPNQPSFHSV*GWVRGP
Trigger: GGGACCCCTGACCCATCCCAAAACACTGTGGAAAGA...GGGCTGGTTCGGGTCAGTGTCTACGGGTGGTGGATTTAGTGACCACCCTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp GGAGGAGGGTGGTCACTAAATCCACCACCCGTAGACACTGACCCGAACCAGCCCATGGGCCAGCTTGGGTaGCAGCTATGTGGGTCCAAA +
Preference number: 5 (lower is better)
Translates to: GGGWSLNPPPVDTDPNQPMGQLG*QLCGSK
Trigger: TTTGGACCCACATAGCTGCAACCCAAGCTGGCCCAT...GGGCTGGTTCGGGTCAGTGTCTACGGGTGGTGGATTTAGTGACCACCCTCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp GATTATGGGCCAGCTTGGGTTGCAGCTATGTGGGTCCAAACTCTCGGCCCTCCTTGGGACAGGACCATCTaGAATGGGAGGGAGAGCACC +
Preference number: 5 (lower is better)
Translates to: DYGPAWVAAMWVQTLGPPWDRTI*NGREST
Trigger: GGTGCTCTCCCTCCCATTCAAGATGGTCCTGTCCCA...AGGAGGGCCGAGAGTTTGGACCCACATAGCTGCAACCCAAGCTGGCCCATAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp ACCCGAACCAGCCCCAAATGCCCCGTTGCATGTGAAAGTCTGGCTCCCTCAGAGTGTACAGGGTGCCACTaGAACACAGCAACAGCGGGA +
Preference number: 5 (lower is better)
Translates to: TRTSPKCPVACESLAPSECTGCH*NTATAG
Trigger: TCCCGCTGTTGCTGTGTTCAAGTGGCACCCTGTACA...CTCTGAGGGAGCCAGACTTTCACATGCAACGGGGCATTTGGGGCTGGTTCGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS TCA 90 bp ACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTaGACAGGATGTCCTTCCGTTAGCCCCGGGAGATCGTGGTGTCCT +
Preference number: 5 (lower is better)
Translates to: TRYPLPEFRARAFFP*TGCPSVSPGRSWCP
Trigger: AGGACACCACGATCTCCCGGGGCTAACGGAAGGACATCCTGTTCAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS CCA 90 bp ATGGCCAGCAGGTTGAGGAGCAGGCCCAGGACGAAGGTGGGGATGTaGACTGCAAACTGTAGGGTTTTCATCAGCTCGTTGACACCGTCA +
Preference number: 5 (lower is better)
Translates to: MASRLRSRPRTKVGM*TANCRVFISSLTPS
Trigger: TGACGGTGTCAACGAGCTGATGAAAACCCTACAGTTTGCAGTCCACATCCCCACCTTCGTCCTGGGCCTGCTCCTCAACCTGCTGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000438398.1
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp CCTGAGAAGGCGACTCCTGTCCGTCCATGGCTCTTAGGCCAGCTGGGAAAGCTCGTCCCCACTGGTGTTTaGCTGACTCATGTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: PEKATPVRPWLLGQLGKLVPTGV*LTHVSS
Trigger: GGAAGAAACATGAGTCAGCAAAACACCAGTGGGGAC...GAGCTTTCCCAGCTGGCCTAAGAGCCATGGACGGACAGGAGTCGCCTTCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CAA 90 bp AAGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACTGGATGGCCAGCAGGTaGAGGAGCAGGCCCAGGACG +
Preference number: 5 (lower is better)
Translates to: KHISEDGADHPTTSKPWNWMASR*RSRPRT
Trigger: CGTCCTGGGCCTGCTCCTCAACCTGCTGGCCATCCA...GTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp GCCCCTCCTGTGCTGCTGGGCCCCACTGCTGATTATGGGCCAGCTTGGGTTGCAAGCAATTCATGCCCATaGAATCACAACTGTTGGTGG +
Preference number: 5 (lower is better)
Translates to: APPVLLGPTADYGPAWVASNSCP*NHNCWW
Trigger: CCACCAACAGTTGTGATTCAATGGGCATGAATTGCT...TGCAACCCAAGCTGGCCCATAATCAGCAGTGGGGCCCAGCAGCACAGGAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp CCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCACAGTGTGGAAAATGGGGAGAGTaGGAAACAGCCTTGTTGACA +
Preference number: 5 (lower is better)
Translates to: PLPQTRVPTEKRPFFPQCGKWGE*ETALLT
Trigger: TGTCAACAAGGCTGTTTCCAACTCTCCCCATTTTCC...ACACTGTGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp GAGAAGCCATCCAGGCGTGACTCAATTGTTTACAGTTTCCTGGGACCAGCAGGGCCTCCTCCAGATCCGTaGAGAAGCCATCCAGGCGTG +
Preference number: 5 (lower is better)
Translates to: EKPSRRDSIVYSFLGPAGPPPDP*RSHPGV
Trigger: CACGCCTGGATGGCTTCTCAACGGATCTGGAGGAGG...CCCTGCTGGTCCCAGGAAACTGTAAACAATTGAGTCACGCCTGGATGGCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CAA 90 bp CGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCACAGTGTTCTGGCCTTAAGCACATaGGTAGACCCAAGTGCACAT +
Preference number: 5 (lower is better)
Translates to: RSHRHGSPRRRGPSFHSVLALST*VDPSAH
Trigger: ATGTGCACTTGGGTCTACCAATGTGCTTAAGGCCAG...AACACTGTGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp GTCCCCAGGGCACACCCACAGGTCCATAGTTGTCACATCACACTGAGACTGCTGTCTTTCCACAGTGTTTaGGGATGGGTCAGGGGTCCC +
Preference number: 5 (lower is better)
Translates to: VPRAHPQVHSCHITLRLLSFHSV*GWVRGP
Trigger: GGGACCCCTGACCCATCCCAAAACACTGTGGAAAGA...CAGCAGTCTCAGTGTGATGTGACAACTATGGACCTGTGGGTGTGCCCTGGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp TCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACTGGATGGCCAGCAGGTaGAGGAGCAGGCCCAGGACG +
Preference number: 5 (lower is better)
Translates to: SKGSTSVKMVRIIPPHQNWMASR*RSRPRT
Trigger: CGTCCTGGGCCTGCTCCTCAACCTGCTGGCCATCCA...GTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp CCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGTGGGACAGGACCATCTaGAATGGGAGGGAGAGCACC +
Preference number: 5 (lower is better)
Translates to: PTTSKPWNAISVTRIQGQWDRTI*NGREST
Trigger: GGTGCTCTCCCTCCCATTCAAGATGGTCCTGTCCCA...CTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp ACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGAGGTGATCCATGCTACTaGCCCAGCCCCAACACCACC +
Preference number: 5 (lower is better)
Translates to: TSVKMVRIIPPHQNPGTRGDPCY*PSPNTT
Trigger: GGTGGTGTTGGGGCTGGGCAAGTAGCATGGATCACC...TCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CAA 90 bp TGCCCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCACAGCCTGATTCTTTGCCATaGTTTTCAAGGAAGCTAGCT +
Preference number: 5 (lower is better)
Translates to: CPLPQTRVPTEKRPFFPQPDSLP*FSRKLA
Trigger: AGCTAGCTTCCTTGAAAACAATGGCAAAGAATCAGG...CTGTGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CAA 90 bp CCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGCTCAAGGCCACACCCTaGTGCCTAGCTGCCTCATCT +
Preference number: 5 (lower is better)
Translates to: PTTSKPWNAISVTRIQGQLKATP*CLAASS
Trigger: AGATGAGGCAGCTAGGCACAAGGGTGTGGCCTTGAG...CTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CAA 90 bp TTGGATGTCATCAACACCCCACTCAGTCATTTTGCAGTCTTCTCACGGGCACGGGGCTTCCGCTGTCACTaGCACTCCTCCTCCAGATCC +
Preference number: 5 (lower is better)
Translates to: LDVINTPLSHFAVFSRARGFRCH*HSSSRS
Trigger: GGATCTGGAGGAGGAGTGCAAGTGACAGCGGAAGCC...CCGTGCCCGTGAGAAGACTGCAAAATGACTGAGTGGGGTGTTGATGACATCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CAA 90 bp ATCACACTGAGACTGCTGATACCCTCCAAGGACCTTCCTCTTACAGCCATGCAGGGCTTCCGCTGTCACTaGCACTCCTCCTCCAGATCC +
Preference number: 5 (lower is better)
Translates to: ITLRLLIPSKDLPLTAMQGFRCH*HSSSRS
Trigger: GGATCTGGAGGAGGAGTGCAAGTGACAGCGGAAGCC...CTGCATGGCTGTAAGAGGAAGGTCCTTGGAGGGTATCAGCAGTCTCAGTGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CAA 90 bp ACACTGAGACTGCTGATACCCTCCAAGGACCTTCCTCTTACAGCCATGCAGCTCGCCCCAAATGCCCCGTaGCATGTGAAAGTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: TLRLLIPSKDLPLTAMQLAPNAP*HVKVWL
Trigger: GAGCCAGACTTTCACATGCAACGGGGCATTTGGGGC...GAGCTGCATGGCTGTAAGAGGAAGGTCCTTGGAGGGTATCAGCAGTCTCAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp GTCCCCAGGGCACACCCACAGGTCCATAGTTGTCACATCACACTGAGACTGCTGGTCCCCACTGGTGTTTaGCTGACTCATGTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: VPRAHPQVHSCHITLRLLVPTGV*LTHVSS
Trigger: GGAAGAAACATGAGTCAGCAAAACACCAGTGGGGAC...CAGCAGTCTCAGTGTGATGTGACAACTATGGACCTGTGGGTGTGCCCTGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp AGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGTGGGACAGGACCATCTaGAATGGGAGGGAGAGCACC +
Preference number: 5 (lower is better)
Translates to: STSVKMVRIIPPHQNPGTWDRTI*NGREST
Trigger: GGTGCTCTCCCTCCCATTCAAGATGGTCCTGTCCCA...CGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp CTCCCAACTCCTCGTGCAGAGAAAGAAGTGGGAGGAGGGTGGTCACTAAATCCAAGCGGGAAGAAGACCTaGGCGCTCCAGGTATCATCA +
Preference number: 5 (lower is better)
Translates to: LPTPRAEKEVGGGWSLNPSGKKT*ALQVSS
Trigger: TGATGATACCTGGAGCGCCAAGGTCTTCTTCCCGCT...TGGATTTAGTGACCACCCTCCTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp ACACTGAGACTGCTGATACCCTCCAAGGACCTTCCTCTTACAGCCATGCAGCTCAGCGGGAAGAAGACCTaGGCGCTCCAGGTATCATCA +
Preference number: 5 (lower is better)
Translates to: TLRLLIPSKDLPLTAMQLSGKKT*ALQVSS
Trigger: TGATGATACCTGGAGCGCCAAGGTCTTCTTCCCGCT...GAGCTGCATGGCTGTAAGAGGAAGGTCCTTGGAGGGTATCAGCAGTCTCAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp CCGCTCCCACAGACACGGGTCCCCACGGAGAAGAGGCCCTTCTTTCCACAGTGTGAAACACATGGACAATaGCAAGAAGAAGCTGATGCT +
Preference number: 5 (lower is better)
Translates to: PLPQTRVPTEKRPFFPQCETHGQ*QEEADA
Trigger: AGCATCAGCTTCTTCTTGCAATTGTCCATGTGTTTC...ACACTGTGGAAAGAAGGGCCTCTTCTCCGTGGGGACCCGTGTCTGTGGGAGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp ACTCAACTCCACCAGGCAGGCTCCCAACTCCTCGTGCAGAGAAAGAAGTGGGAGACATCCAGGCAGCAGTaGACGTTGGAGAAACACATG +
Preference number: 5 (lower is better)
Translates to: TQLHQAGSQLLVQRKKWETSRQQ*TLEKHM
Trigger: CATGTGTTTCTCCAACGTCAACTGCTGCCTGGATGT...CTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAGCCTGCCTGGTGGAGTTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp CACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTCTCAAGGCCACACCCTaGTGCCTAGCTGCCTCATCT +
Preference number: 5 (lower is better)
Translates to: HIKTLERDIRYQNSGPGLLKATP*CLAASS
Trigger: AGATGAGGCAGCTAGGCACAAGGGTGTGGCCTTGAG...AAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CAA 90 bp TCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCTCCTCCAGATCCGTaGAGAAGCCATCCAGGCGTG +
Preference number: 5 (lower is better)
Translates to: SSHHIKTLERDIRYQNSGPPPDP*RSHPGV
Trigger: CACGCCTGGATGGCTTCTCAACGGATCTGGAGGAGG...CCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CAA 90 bp CCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGACTTCCACCCCTTCATaGACGCTCTCTTCCTCACCC +
Preference number: 5 (lower is better)
Translates to: PTTSKPWNAISVTRIQGQTSTPS*TLSSSP
Trigger: GGGTGAGGAAGAGAGCGTCAATGAAGGGGTGGAAGT...CTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp ACTCAACTCCACCAGGCAGGCTCCCAACTCCTCGTGCAGAGAAAGAAGTGGGAGCTGGCCTTAAGCACATaGGTAGACCCAAGTGCACAT +
Preference number: 5 (lower is better)
Translates to: TQLHQAGSQLLVQRKKWELALST*VDPSAH
Trigger: ATGTGCACTTGGGTCTACCAATGTGCTTAAGGCCAG...CTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAGCCTGCCTGGTGGAGTTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp CCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGTCTTTCCACAGTGTTTaGGGATGGGTCAGGGGTCCC +
Preference number: 5 (lower is better)
Translates to: PTTSKPWNAISVTRIQGQSFHSV*GWVRGP
Trigger: GGGACCCCTGACCCATCCCAAAACACTGTGGAAAGA...CTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp TGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGAACATGGGCCAGCTTGGGTaGCAGCTATGTGGGTCCAAA +
Preference number: 5 (lower is better)
Translates to: WNAISVTRIQGQGFLPLNMGQLG*QLCGSK
Trigger: TTTGGACCCACATAGCTGCAACCCAAGCTGGCCCAT...GTTCAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp AAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCATGGGCCAGCTTGGGTaGCAGCTATGTGGGTCCAAA +
Preference number: 5 (lower is better)
Translates to: KPWNAISVTRIQGQGFLPMGQLG*QLCGSK
Trigger: TTTGGACCCACATAGCTGCAACCCAAGCTGGCCCAT...GGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp AAGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACTGGGACAGGACCATCTaGAATGGGAGGGAGAGCACC +
Preference number: 5 (lower is better)
Translates to: KHISEDGADHPTTSKPWNWDRTI*NGREST
Trigger: GGTGCTCTCCCTCCCATTCAAGATGGTCCTGTCCCA...GTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp CACTCAATGGGCATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCAGCGGGAAGAAGACCTaGGCGCTCCAGGTATCATCA +
Preference number: 5 (lower is better)
Translates to: HSMGIKGKHISEDGADHPSGKKT*ALQVSS
Trigger: TGATGATACCTGGAGCGCCAAGGTCTTCTTCCCGCT...GGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGATGCCCATTGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp TCAATGGGCATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCACCAGCGGGAAGAAGACCTaGGCGCTCCAGGTATCATCA +
Preference number: 5 (lower is better)
Translates to: SMGIKGKHISEDGADHPTSGKKT*ALQVSS
Trigger: TGATGATACCTGGAGCGCCAAGGTCTTCTTCCCGCT...GGTGGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGATGCCCATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp ATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGCGGGAAGAAGACCTaGGCGCTCCAGGTATCATCA +
Preference number: 5 (lower is better)
Translates to: IPPHQNPGTRYPLPEFRASGKKT*ALQVSS
Trigger: TGATGATACCTGGAGCGCCAAGGTCTTCTTCCCGCT...GGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp ACTCAACTCCACCAGGCAGGCTCCCAACTCCTCGTGCAGAGAAAGAAGTGGGAGAGGCAGCAGTTGACGTaGGAGAAACACATGGACAAT +
Preference number: 5 (lower is better)
Translates to: TQLHQAGSQLLVQRKKWERQQLT*EKHMDN
Trigger: ATTGTCCATGTGTTTCTCCAACGTCAACTGCTGCCT...CTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAGCCTGCCTGGTGGAGTTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp GATGGGTCAGGGGTCCCCAGGGCACACCCACAGGTCCATAGTTGTCACATCACAGAGTTGGAAACAGCCTaGTTGACATGGTCTCATTCT +
Preference number: 5 (lower is better)
Translates to: DGSGVPRAHPQVHSCHITELETA*LTWSHS
Trigger: AGAATGAGACCATGTCAACAAGGCTGTTTCCAACTC...TGTGATGTGACAACTATGGACCTGTGGGTGTGCCCTGGGGACCCCTGACCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp GTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAAACTTCCACCCCTTCATaGACGCTCTCTTCCTCACCC +
Preference number: 5 (lower is better)
Translates to: VRIIPPHQNPGTRYPLPETSTPS*TLSSSP
Trigger: GGGTGAGGAAGAGAGCGTCAATGAAGGGGTGGAAGT...TTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp ATCACACTGAGACTGCTGATACCCTCCAAGGACCTTCCTCTTACAGCCATGCAGTCTTTCCACAGTGTTTaGGGATGGGTCAGGGGTCCC +
Preference number: 5 (lower is better)
Translates to: ITLRLLIPSKDLPLTAMQSFHSV*GWVRGP
Trigger: GGGACCCCTGACCCATCCCAAAACACTGTGGAAAGA...CTGCATGGCTGTAAGAGGAAGGTCCTTGGAGGGTATCAGCAGTCTCAGTGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS CCA 90 bp CCATGGGAAGGAGGAAGCCAAACACCTCCAGCGGGAAGAAGACCTTaGCGCTCCAGGTATCATCAGACATGTTGTGGAAGCACATGTATT +
Preference number: 5 (lower is better)
Translates to: PWEGGSQTPPAGRRP*RSRYHQTCCGSTCI
Trigger: AATACATGTGCTTCCACAACATGTCTGATGATACCTGGAGCGCCAAGGTCTTCTTCCCGCTGGAGGTGTTTGGCTTCCTCCTTCCCATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000438398.1
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp AGGCTCCCAACTCCTCGTGCAGAGAAAGAAGTGGGAGGAGGGTGGTCACTAAATGTTTTCATCAGCTCGTaGACACCGTCAAACAGGCAG +
Preference number: 5 (lower is better)
Translates to: RLPTPRAEKEVGGGWSLNVFISS*TPSNRQ
Trigger: CTGCCTGTTTGACGGTGTCAACGAGCTGATGAAAAC...ATTTAGTGACCACCCTCCTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp AGTCATTGGGAGGCTTCCGCTGTCACTTGCACTCCTCCTCCAGATCCGTTGAGAGGAAAATGGGGAGAGTaGGAAACAGCCTTGTTGACA +
Preference number: 5 (lower is better)
Translates to: SHWEASAVTCTPPPDPLRGKWGE*ETALLT
Trigger: TGTCAACAAGGCTGTTTCCAACTCTCCCCATTTTCC...TCTCAACGGATCTGGAGGAGGAGTGCAAGTGACAGCGGAAGCCTCCCAATGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CAA 90 bp ATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCCCAAATGCCCCGTaGCATGTGAAAGTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: IIPPHQNPGTRYPLPEFRAPNAP*HVKVWL
Trigger: GAGCCAGACTTTCACATGCAACGGGGCATTTGGGGC...CCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp CCTCAGAGTATCACGGGTGGGTCTCTGTCTAGGGTGGCCATGGGAGAGGGCAGCGATAAGATTTTATGTTaGAACATCGCTGGGGATGAT +
Preference number: 5 (lower is better)
Translates to: PQSITGGSLSRVAMGEGSDKILC*NIAGDD
Trigger: ATCATCCCCAGCGATGTTCAAACATAAAATCTTATC...GCTGCCCTCTCCCATGGCCACCCTAGACAGAGACCCACCCGTGATACTCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp AGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGGTCCCCACTGGTGTTTaGCTGACTCATGTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: STSVKMVRIIPPHQNPGTVPTGV*LTHVSS
Trigger: GGAAGAAACATGAGTCAGCAAAACACCAGTGGGGAC...CGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp TCAATGGGCATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCACCGTCCCCACTGGTGTTTaGCTGACTCATGTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: SMGIKGKHISEDGADHPTVPTGV*LTHVSS
Trigger: GGAAGAAACATGAGTCAGCAAAACACCAGTGGGGAC...GGTGGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGATGCCCATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp GAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTGTTTTCATCAGCTCGTaGACACCGTCAAACAGGCAG +
Preference number: 5 (lower is better)
Translates to: EDGADHPTTSKPWNAISVVFISS*TPSNRQ
Trigger: CTGCCTGTTTGACGGTGTCAACGAGCTGATGAAAAC...AACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp AAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCGTTTTCATCAGCTCGTaGACACCGTCAAACAGGCAG +
Preference number: 5 (lower is better)
Translates to: KTLERDIRYQNSGPGLSSVFISS*TPSNRQ
Trigger: CTGCCTGTTTGACGGTGTCAACGAGCTGATGAAAAC...GGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp ATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAATGGGACAGGACCATCTaGAATGGGAGGGAGAGCACC +
Preference number: 5 (lower is better)
Translates to: IKGKHISEDGADHPTTSKWDRTI*NGREST
Trigger: GGTGCTCTCCCTCCCATTCAAGATGGTCCTGTCCCA...TTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp AGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCAAGCTGATGCTCTGCTaGGCTCTGCACTCTACGATA +
Preference number: 5 (lower is better)
Translates to: SEDGADHPTTSKPWNAISKLMLC*ALHSTI
Trigger: TATCGTAGAGTGCAGAGCCAAGCAGAGCATCAGCTT...GGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp AAAGCTGGCACTCAATGGGCATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGAAGCTGATGCTCTGCTaGGCTCTGCACTCTACGATA +
Preference number: 5 (lower is better)
Translates to: KAGTQWASKGSTSVKMVRKLMLC*ALHSTI
Trigger: TATCGTAGAGTGCAGAGCCAAGCAGAGCATCAGCTT...CCGCACCATCTTCACTGATGTGCTTCCCTTTGATGCCCATTGAGTGCCAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp GTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGAGGCAGCAGTTGACGTaGGAGAAACACATGGACAAT +
Preference number: 5 (lower is better)
Translates to: VKMVRIIPPHQNPGTRYPRQQLT*EKHMDN
Trigger: ATTGTCCATGTGTTTCTCCAACGTCAACTGCTGCCT...CGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp AGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCACATCCAGGCAGCAGTaGACGTTGGAGAAACACATG +
Preference number: 5 (lower is better)
Translates to: SEDGADHPTTSKPWNAISTSRQQ*TLEKHM
Trigger: CATGTGTTTCTCCAACGTCAACTGCTGCCTGGATGT...GGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp AGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACACATCCAGGCAGCAGTaGACGTTGGAGAAACACATG +
Preference number: 5 (lower is better)
Translates to: RWCGSSHHIKTLERDIRYTSRQQ*TLEKHM
Trigger: CATGTGTTTCTCCAACGTCAACTGCTGCCTGGATGT...GTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp TCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACTGTACAGGGTGCCACTaGAACACAGCAACAGCGGGA +
Preference number: 5 (lower is better)
Translates to: SKGSTSVKMVRIIPPHQNCTGCH*NTATAG
Trigger: TCCCGCTGTTGCTGTGTTCAAGTGGCACCCTGTACA...GTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CAA 90 bp AGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCTGGCCTTAAGCACATaGGTAGACCCAAGTGCACAT +
Preference number: 5 (lower is better)
Translates to: STSVKMVRIIPPHQNPGTLALST*VDPSAH
Trigger: ATGTGCACTTGGGTCTACCAATGTGCTTAAGGCCAG...CGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp AGTTGTCACATCACACTGAGACTGCTGATACCCTCCAAGGACCTTCCTCTTACAATGGGCCAGCTTGGGTaGCAGCTATGTGGGTCCAAA +
Preference number: 5 (lower is better)
Translates to: SCHITLRLLIPSKDLPLTMGQLG*QLCGSK
Trigger: TTTGGACCCACATAGCTGCAACCCAAGCTGGCCCAT...TGTAAGAGGAAGGTCCTTGGAGGGTATCAGCAGTCTCAGTGTGATGTGACAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp CGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCGTTTTCATCAGCTCGTaGACACCGTCAAACAGGCAG +
Preference number: 5 (lower is better)
Translates to: RIIPPHQNPGTRYPLPEFVFISS*TPSNRQ
Trigger: CTGCCTGTTTGACGGTGTCAACGAGCTGATGAAAAC...GAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp AGAGTCATGCTGCACATAGATAAGATTTTATGTTTGAACATCGCTGGGGATGATTGGATGGCCAGCAGGTaGAGGAGCAGGCCCAGGACG +
Preference number: 5 (lower is better)
Translates to: RVMLHIDKILCLNIAGDDWMASR*RSRPRT
Trigger: CGTCCTGGGCCTGCTCCTCAACCTGCTGGCCATCCA...ATCATCCCCAGCGATGTTCAAACATAAAATCTTATCTATGTGCAGCATGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp GGCATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAGGCAGCAGTTGACGTaGGAGAAACACATGGACAAT +
Preference number: 5 (lower is better)
Translates to: GIKGKHISEDGADHPTTSRQQLT*EKHMDN
Trigger: ATTGTCCATGTGTTTCTCCAACGTCAACTGCTGCCT...TGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp AAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCAGGCAGCAGTTGACGTaGGAGAAACACATGGACAAT +
Preference number: 5 (lower is better)
Translates to: KTLERDIRYQNSGPGLSSRQQLT*EKHMDN
Trigger: ATTGTCCATGTGTTTCTCCAACGTCAACTGCTGCCT...GGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp CTCCCAACTCCTCGTGCAGAGAAAGAAGTGGGAGGAGGGTGGTCACTAAATCCAAGCAATTCATGCCCATaGAATCACAACTGTTGGTGG +
Preference number: 5 (lower is better)
Translates to: LPTPRAEKEVGGGWSLNPSNSCP*NHNCWW
Trigger: CCACCAACAGTTGTGATTCAATGGGCATGAATTGCT...TGGATTTAGTGACCACCCTCCTCCCACTTCTTTCTCTGCACGAGGAGTTGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp CACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGAGCAATTCATGCCCATaGAATCACAACTGTTGGTGG +
Preference number: 5 (lower is better)
Translates to: HISEDGADHPTTSKPWNASNSCP*NHNCWW
Trigger: CCACCAACAGTTGTGATTCAATGGGCATGAATTGCT...CGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp GAAGCCCATCTGGCCTTAAGCACATTGGTAGACCCAAGTGCACATGACGGGCATGAGTTGGAAACAGCCTaGTTGACATGGTCTCATTCT +
Preference number: 5 (lower is better)
Translates to: EAHLALSTLVDPSAHDGHELETA*LTWSHS
Trigger: AGAATGAGACCATGTCAACAAGGCTGTTTCCAACTC...ATGCCCGTCATGTGCACTTGGGTCTACCAATGTGCTTAAGGCCAGATGGGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp GATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCGAGTTGGAAACAGCCTaGTTGACATGGTCTCATTCT +
Preference number: 5 (lower is better)
Translates to: DGADHPTTSKPWNAISVTELETA*LTWSHS
Trigger: AGAATGAGACCATGTCAACAAGGCTGTTTCCAACTC...GGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp TTGGATGTCATCAACACCCCACTCAGTCATTTTGCAGTCTTCTCACGGGCACGGGGAAAATGGGGAGAGTaGGAAACAGCCTTGTTGACA +
Preference number: 5 (lower is better)
Translates to: LDVINTPLSHFAVFSRARGKWGE*ETALLT
Trigger: TGTCAACAAGGCTGTTTCCAACTCTCCCCATTTTCC...CCGTGCCCGTGAGAAGACTGCAAAATGACTGAGTGGGGTGTTGATGACATCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CAA 90 bp TCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCTGGCCTTAAGCACATaGGTAGACCCAAGTGCACAT +
Preference number: 5 (lower is better)
Translates to: SSHHIKTLERDIRYQNSGLALST*VDPSAH
Trigger: ATGTGCACTTGGGTCTACCAATGTGCTTAAGGCCAG...CCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp CTGTGCTGCTGGGCCCCACTGCTGATTATGGGCCAGCTTGGGTTGCAGCTATGTGATAAGATTTTATGTTaGAACATCGCTGGGGATGAT +
Preference number: 5 (lower is better)
Translates to: LCCWAPLLIMGQLGLQLCDKILC*NIAGDD
Trigger: ATCATCCCCAGCGATGTTCAAACATAAAATCTTATC...ACATAGCTGCAACCCAAGCTGGCCCATAATCAGCAGTGGGGCCCAGCAGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp GGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAAGCAATTCATGCCCATaGAATCACAACTTCCAGAAG +
Preference number: 5 (lower is better)
Translates to: GADHPTTSKPWNAISVTRSNSCP*NHNFQK
Trigger: CTTCTGGAAGTTGTGATTCAATGGGCATGAATTGCT...TCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392039.2
CDS-3UTR CAA 90 bp GGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAAAGCTGATGCTCTGCTaGGCTCTGCACTCTACGATA +
Preference number: 5 (lower is better)
Translates to: GSSHHIKTLERDIRYQNSKLMLC*ALHSTI
Trigger: TATCGTAGAGTGCAGAGCCAAGCAGAGCATCAGCTT...TGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp GCGATATCCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTGAACAGGATGGAAACACATGGACAATaGCAAGAAGAAGCTGATGCT +
Preference number: 5 (lower is better)
Translates to: AISVTRIQGQGFLPLNRMETHGQ*QEEADA
Trigger: AGCATCAGCTTCTTCTTGCAATTGTCCATGTGTTTC...CATCCTGTTCAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGGATATCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp CGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGCAGCAGTTGACGTaGGAGAAACACATGGACAAT +
Preference number: 5 (lower is better)
Translates to: RIIPPHQNPGTRYPLPEFRQQLT*EKHMDN
Trigger: ATTGTCCATGTGTTTCTCCAACGTCAACTGCTGCCT...GAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp ATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGACATCCAGGCAGCAGTaGACGTTGGAGAAACACATG +
Preference number: 5 (lower is better)
Translates to: IIPPHQNPGTRYPLPEFRTSRQQ*TLEKHM
Trigger: CATGTGTTTCTCCAACGTCAACTGCTGCCTGGATGT...CCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp AGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACAGCAATTCATGCCCATaGAATCACAACTGTTGGTGG +
Preference number: 5 (lower is better)
Translates to: RWCGSSHHIKTLERDIRYSNSCP*NHNCWW
Trigger: CCACCAACAGTTGTGATTCAATGGGCATGAATTGCT...GTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp ATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGGCCGAGTTGGAAACAGCCTaGTTGACATGGTCTCATTCT +
Preference number: 5 (lower is better)
Translates to: IPPHQNPGTRYPLPEFRAELETA*LTWSHS
Trigger: AGAATGAGACCATGTCAACAAGGCTGTTTCCAACTC...GGCCCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp AAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTAGGAAAATGGGGAGAGTaGGAAACAGCCTTGTTGACA +
Preference number: 5 (lower is better)
Translates to: KMVRIIPPHQNPGTRYPLGKWGE*ETALLT
Trigger: TGTCAACAAGGCTGTTTCCAACTCTCCCCATTTTCC...TAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp ACTGGAAAATGCAAGTCTGCTCTGTTCTGGGACACCCAAACTAAAAAGGGACTTCCCCACTCAGTCATTTaGCAGTCTTCTCACGGGCAC +
Preference number: 5 (lower is better)
Translates to: TGKCKSALFWDTQTKKGLPHSVI*QSSHGH
Trigger: GTGCCCGTGAGAAGACTGCAAAATGACTGAGTGGGG...AAGTCCCTTTTTAGTTTGGGTGTCCCAGAACAGAGCAGACTTGCATTTTCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CAA 90 bp CTGCCCAAGACACTCTCCCCAATAACTGACTCTCTTGGCTCCCTCCTTTACCTCCCTGATTCTTTGCCATaGTTTTCAAGGAAGCTAGCT +
Preference number: 5 (lower is better)
Translates to: LPKTLSPITDSLGSLLYLPDSLP*FSRKLA
Trigger: AGCTAGCTTCCTTGAAAACAATGGCAAAGAATCAGG...GAGGTAAAGGAGGGAGCCAAGAGAGTCAGTTATTGGGGAGAGTGTCTTGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CAA 90 bp ATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAAAAGCTGATGCTCTGCTaGGCTCTGCACTCTACGATA +
Preference number: 5 (lower is better)
Translates to: IKGKHISEDGADHPTTSKKLMLC*ALHSTI
Trigger: TATCGTAGAGTGCAGAGCCAAGCAGAGCATCAGCTT...TTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGAT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp AGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGAAACACATGGACAATaGCAAGAAGAAGCTGATGCT +
Preference number: 5 (lower is better)
Translates to: SEDGADHPTTSKPWNAISETHGQ*QEEADA
Trigger: AGCATCAGCTTCTTCTTGCAATTGTCCATGTGTTTC...GGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp GAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTGAAACACATGGACAATaGCAAGAAGAAGCTGATGCT +
Preference number: 5 (lower is better)
Translates to: EDGADHPTTSKPWNAISVETHGQ*QEEADA
Trigger: AGCATCAGCTTCTTCTTGCAATTGTCCATGTGTTTC...AACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp TTGGATGTCATCAACACCCCACTCAGTCATTTTGCAGTCTTCTCACGGGCACGGTTGGAAACAGCCTTGTaGACATGGTCTCATTCTCTT +
Preference number: 5 (lower is better)
Translates to: LDVINTPLSHFAVFSRARLETAL*TWSHSL
Trigger: AAGAGAATGAGACCATGTCAACAAGGCTGTTTCCAA...CCGTGCCCGTGAGAAGACTGCAAAATGACTGAGTGGGGTGTTGATGACATCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392040.5
ENST00000650999.1
CDS-3UTR CAA 90 bp AGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGTTGGAAACAGCCTTGTaGACATGGTCTCATTCTCTT +
Preference number: 5 (lower is better)
Translates to: STSVKMVRIIPPHQNPGTLETAL*TWSHSL
Trigger: AAGAGAATGAGACCATGTCAACAAGGCTGTTTCCAA...CGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp GATGGTGCGGATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCGATAAGATTTTATGTTaGAACATCGCTGGGGATGAT +
Preference number: 5 (lower is better)
Translates to: DGADHPTTSKPWNAISVTDKILC*NIAGDD
Trigger: ATCATCCCCAGCGATGTTCAAACATAAAATCTTATC...GGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGATCCGCACCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp ATCATCCCACCACATCAAAACCCTGGAACGCGATATCCGTTACCAGAATTCAGGTTGGAAACAGCCTTGTaGACATGGTCTCATTCTCTT +
Preference number: 5 (lower is better)
Translates to: IIPPHQNPGTRYPLPEFRLETAL*TWSHSL
Trigger: AAGAGAATGAGACCATGTCAACAAGGCTGTTTCCAA...CCTGAATTCTGGTAACGGATATCGCGTTCCAGGGTTTTGATGTGGTGGGATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp AGAGTCATGCTGCACATAGATAAGATTTTATGTTTGAACATCGCTGGGGATGATACTTCCACCCCTTCATaGACGCTCTCTTCCTCACCC +
Preference number: 5 (lower is better)
Translates to: RVMLHIDKILCLNIAGDDTSTPS*TLSSSP
Trigger: GGGTGAGGAAGAGAGCGTCAATGAAGGGGTGGAAGT...ATCATCCCCAGCGATGTTCAAACATAAAATCTTATCTATGTGCAGCATGACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp ATCAAAGGGAAGCACATCAGTGAAGATGGTGCGGATCATCCCACCACATCAAAAGAAACACATGGACAATaGCAAGAAGAAGCTGATGCT +
Preference number: 5 (lower is better)
Translates to: IKGKHISEDGADHPTTSKETHGQ*QEEADA
Trigger: AGCATCAGCTTCTTCTTGCAATTGTCCATGTGTTTC...TTTTGATGTGGTGGGATGATCCGCACCATCTTCACTGATGTGCTTCCCTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS-3UTR CAA 90 bp AGAGTCATGCTGCACATAGATAAGATTTTATGTTTGAACATCGCTGGGGATGATTTGGAAACAGCCTTGTaGACATGGTCTCATTCTCTT +
Preference number: 5 (lower is better)
Translates to: RVMLHIDKILCLNIAGDDLETAL*TWSHSL
Trigger: AAGAGAATGAGACCATGTCAACAAGGCTGTTTCCAA...ATCATCCCCAGCGATGTTCAAACATAAAATCTTATCTATGTGCAGCATGACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS CCA 72 bp CAGTCCTGGGTGTGGTCTCGGCGGCCCAGCAGGATGTaGATGCTCCTGGAGCAGCAGAAGCCCATGATGCCC +
Preference number: 6 (lower is better)
Translates to: QSWVWSRRPSRM*MLLEQQKPMMP
Trigger: GGGCATCATGGGCTTCTGCTGCTCCAGGAGCATCCACATCCTGCTGGGCCGCCGAGACCACACCCAGGACTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000438398.1
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS CCA 72 bp ACCAGGGTGCACAGGGACGGGAAGGGGGACTGTACCTaGGACAGGACCATCTTGAATGGGAGGGAGAGCACC +
Preference number: 6 (lower is better)
Translates to: TRVHRDGKGDCT*DRTILNGREST
Trigger: GGTGCTCTCCCTCCCATTCAAGATGGTCCTGTCCCAGGTACAGTCCCCCTTCCCGTCCCTGTGCACCCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000438398.1
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS GCA 72 bp CCACGAAGACAGCCAGGCTGGCTGCGATGCTGTAGATaGAGGCTTTCTGCTGCACCCAGTCCTGGGTGTGGT +
Preference number: 6 (lower is better)
Translates to: PRRQPGWLRCCR*RLSAAPSPGCG
Trigger: ACCACACCCAGGACTGGGTGCAGCAGAAAGCCTGCATCTACAGCATCGCAGCCAGCCTGGCTGTCTTCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000438398.1
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS GCA 72 bp GGAAGGAGACCACGAAGACAGCCAGGCTGGCTGCGATaGTGTAGATGCAGGCTTTCTGCTGCACCCAGTCCT +
Preference number: 6 (lower is better)
Translates to: GRRPRRQPGWLR*CRCRLSAAPSP
Trigger: AGGACTGGGTGCAGCAGAAAGCCTGCATCTACAGCATCGCAGCCAGCCTGGCTGTCTTCGTGGTCTCCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000438398.1
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS TCA 72 bp GCAGGATGTGGATGCTCCTGGAGCAGCAGAAGCCCATaGTGCCCATGGGAAGGAGGAAGCCAAACACCTCCA +
Preference number: 6 (lower is better)
Translates to: AGCGCSWSSRSP*CPWEGGSQTPP
Trigger: TGGAGGTGTTTGGCTTCCTCCTTCCCATGGGCATCATGGGCTTCTGCTGCTCCAGGAGCATCCACATCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000438398.1
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS TCA 72 bp CCGTTACCAGAATTCAGGGCCAGGGCTTTCTTCCCCTaGACAGGATGTCCTTCCGTTAGCCCCGGGAGATCG +
Preference number: 6 (lower is better)
Translates to: PLPEFRARAFFP*TGCPSVSPGRS
Trigger: CGATCTCCCGGGGCTAACGGAAGGACATCCTGTTCAGGGGAAGAAAGCCCTGGCCCTGAATTCTGGTAACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS CCA 72 bp GTGTCCTGCAGGACCAGCTGGACCCTGGAAGGCCGGTaGGCCCTGATGTTCATGCGGAATTCTTTGATGACA +
Preference number: 6 (lower is better)
Translates to: VSCRTSWTLEGR*ALMFMRNSLMT
Trigger: TGTCATCAAAGAATTCCGCATGAACATCAGGGCCCACCGGCCTTCCAGGGTCCAGCTGGTCCTGCAGGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS TCA 72 bp GGGAGAGCACCAGCAGCAGGTCAAAGACTGCCAGGTTaGTCATGTAGATGGAGGTGGCAGCATAATCGGGCC +
Preference number: 6 (lower is better)
Translates to: GRAPAAGQRLPG*SCRWRWQHNRA
Trigger: GGCCCGATTATGCTGCCACCTCCATCTACATGATCAACCTGGCAGTCTTTGACCTGCTGCTGGTGCTCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000438398.1
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS CCA 72 bp AGGTTGAGGAGCAGGCCCAGGACGAAGGTGGGGATGTaGACTGCAAACTGTAGGGTTTTCATCAGCTCGTTG +
Preference number: 6 (lower is better)
Translates to: RLRSRPRTKVGM*TANCRVFISSL
Trigger: CAACGAGCTGATGAAAACCCTACAGTTTGCAGTCCACATCCCCACCTTCGTCCTGGGCCTGCTCCTCAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000438398.1
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS CCA 72 bp GGAGGAAGCCAAACACCTCCAGCGGGAAGAAGACCTTaGCGCTCCAGGTATCATCAGACATGTTGTGGAAGC +
Preference number: 6 (lower is better)
Translates to: GGSQTPPAGRRP*RSRYHQTCCGS
Trigger: GCTTCCACAACATGTCTGATGATACCTGGAGCGCCAAGGTCTTCTTCCCGCTGGAGGTGTTTGGCTTCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000438398.1
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS CAA 72 bp AGGAGGAAGCCAAACACCTCCAGCGGGAAGAAGACCTaGGCGCTCCAGGTATCATCAGACATGTTGTGGAAG +
Preference number: 6 (lower is better)
Translates to: RRKPNTSSGKKT*ALQVSSDMLWK
Trigger: CTTCCACAACATGTCTGATGATACCTGGAGCGCCAAGGTCTTCTTCCCGCTGGAGGTGTTTGGCTTCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000438398.1
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS CAA 90 bp CCCATGGGAAGGAGGAAGCCAAACACCTCCAGCGGGAAGAAGACCTaGGCGCTCCAGGTATCATCAGACATGTTGTGGAAGCACATGTAT +
Preference number: 6 (lower is better)
Translates to: PMGRRKPNTSSGKKT*ALQVSSDMLWKHMY
Trigger: ATACATGTGCTTCCACAACATGTCTGATGATACCTGGAGCGCCAAGGTCTTCTTCCCGCTGGAGGTGTTTGGCTTCCTCCTTCCCATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000438398.1
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS CAA 90 bp CATCAGCTCGTTGACACCGTCAAACAGGCAGTCCCCACTGGTGTTTaGCTGACTCATGTTTCTTCCTACAACACCAACAGATCAGACGGG +
Preference number: 6 (lower is better)
Translates to: HQLVDTVKQAVPTGV*LTHVSSYNTNRSDG
Trigger: CCCGTCTGATCTGTTGGTGTTGTAGGAAGAAACATGAGTCAGCAAAACACCAGTGGGGACTGCCTGTTTGACGGTGTCAACGAGCTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000438398.1
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS TCA 72 bp ACACCTCCCCAGCATCACACAGCAATTCATGCCCATTaGATCACAACTTCCAGAAGCAGAAGCCACCCAGGA +
Preference number: 6 (lower is better)
Translates to: TPPQHHTAIHAH*ITTSRSRSHPG
Trigger: TCCTGGGTGGCTTCTGCTTCTGGAAGTTGTGATTCAATGGGCATGAATTGCTGTGTGATGCTGGGGAGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392039.2
CDS CCA 72 bp ACATGGTACCTGACGAATTGCTGGAGGCTGAGTGTTTaGGCTAGCTTAAGTGTCATAAAGTCCTGGGGTCCC +
Preference number: 6 (lower is better)
Translates to: TWYLTNCWRLSV*ASLSVIKSWGP
Trigger: GGGACCCCAGGACTTTATGACACTTAAGCTAGCCCAAACACTCAGCCTCCAGCAATTCGTCAGGTACCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392039.2
CDS TCA 72 bp TGTGGACTGCAAACTGTAGGGTTTTCATCAGCTCGTTaGCACCGTCAAACAGGCAGTCCCCACTGGTGTTTT +
Preference number: 6 (lower is better)
Translates to: CGLQTVGFSSAR*HRQTGSPHWCF
Trigger: AAAACACCAGTGGGGACTGCCTGTTTGACGGTGTCAACGAGCTGATGAAAACCCTACAGTTTGCAGTCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000438398.1
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS CAA 72 bp ATGTGGACTGCAAACTGTAGGGTTTTCATCAGCTCGTaGACACCGTCAAACAGGCAGTCCCCACTGGTGTTT +
Preference number: 6 (lower is better)
Translates to: MWTANCRVFISS*TPSNRQSPLVF
Trigger: AAACACCAGTGGGGACTGCCTGTTTGACGGTGTCAACGAGCTGATGAAAACCCTACAGTTTGCAGTCCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000438398.1
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS TCA 72 bp ACACCGTCAAACAGGCAGTCCCCACTGGTGTTTTGCTaGCTCATGTTTCTTCCTACAACACCAACAGATCAG +
Preference number: 6 (lower is better)
Translates to: TPSNRQSPLVFC*LMFLPTTPTDQ
Trigger: CTGATCTGTTGGTGTTGTAGGAAGAAACATGAGTCAGCAAAACACCAGTGGGGACTGCCTGTTTGACGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000438398.1
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS CAA 90 bp TTGGAGAAACACATGGACAATTGCAAGAAGAAGCTGATGCTCTGCTaGGCTCTGCACTCTACGATAAAGCTGTTTCTCACCAGGAACTGC +
Preference number: 6 (lower is better)
Translates to: LEKHMDNCKKKLMLC*ALHSTIKLFLTRNC
Trigger: GCAGTTCCTGGTGAGAAACAGCTTTATCGTAGAGTGCAGAGCCAAGCAGAGCATCAGCTTCTTCTTGCAATTGTCCATGTGTTTCTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1
CDS CAA 72 bp CACATGGACAATTGCAAGAAGAAGCTGATGCTCTGCTaGGCTCTGCACTCTACGATAAAGCTGTTTCTCACC +
Preference number: 6 (lower is better)
Translates to: HMDNCKKKLMLC*ALHSTIKLFLT
Trigger: GGTGAGAAACAGCTTTATCGTAGAGTGCAGAGCCAAGCAGAGCATCAGCTTCTTCTTGCAATTGTCCATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392039.2
ENST00000392040.5
ENST00000444078.5
ENST00000622008.4
ENST00000650999.1