RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPR35 (Homo sapiens)

Ensembl gene IDs: ENSG00000178623

Ensembl transcript IDs: ENST00000319838.10, ENST00000403859.1, ENST00000407714.1, ENST00000430267.2, ENST00000438013.3

Found 434 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTaGCAGGCAGCACCTCCCGGAGCCCCCGAGACCTGGCCCACAGCG +
Preference number: 1 (lower is better)
Translates to: FRADLGLLATGSSFP*QAAPPGAPETWPTA
Trigger: CGCTGTGGGCCAGGTCTCGGGGGCTCCGGGAGGTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
3UTR CCA 90 bp TTCCAGCCCCGAGGGGCAGCGGCAGGTGTCATCAAGGCTGCACCCTaGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGG +
Preference number: 1 (lower is better)
Translates to: FQPRGAAAGVIKAAP*PAGTHSGQVSWFWG
Trigger: CCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCAGCCTTGATGACACCTGCCGCTGCCCCTCGGGGCTGGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
3UTR CCA 90 bp GGCAGGTGTCATCAAGGCTGCACCCTGGCCAGCAGGAACCCACTCTaGCCAGGTGAGCTGGTTCTGGGGGTGGCAAGTGTGAGGCCCCAT +
Preference number: 1 (lower is better)
Translates to: GRCHQGCTLASRNPL*PGELVLGVASVRPH
Trigger: ATGGGGCCTCACACTTGCCACCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCAGCCTTGATGACACCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
3UTR GCA 90 bp CCTGTCCCTCTCTCTTCCCAAGAGAGCAGGTACCTGGGCCGTCCCTaGCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTG +
Preference number: 1 (lower is better)
Translates to: PVPLSSQESRYLGRP*PPKAPREYTVSSGL
Trigger: CAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAGGGACGGCCCAGGTACCTGCTCTCTTGGGAAGAGAGAGGGACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
3UTR-3UTR CCA 90 bp CCAGCCCCGAGGGGCAGCGGCAGGTGTCATCAAGGCTGCACCCTGGCCAGCAGGGGAGCCCCCGAGACCTaGCCCACAGCGCCCACAGCA +
Preference number: 2 (lower is better)
Translates to: PAPRGSGRCHQGCTLASRGAPET*PTAPTA
Trigger: TGCTGTGGGCGCTGTGGGCCAGGTCTCGGGGGCTCC...CCTGCTGGCCAGGGTGCAGCCTTGATGACACCTGCCGCTGCCCCTCGGGGCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
3UTR-3UTR CCA 90 bp CCAGCCCCGAGGGGCAGCGGCAGGTGTCATCAAGGCTGCACCCTGGCCAGCAGGGGTTCCAGCTTCCCCTaGCAGGCAGCACCTCCCGGA +
Preference number: 2 (lower is better)
Translates to: PAPRGSGRCHQGCTLASRGSSFP*QAAPPG
Trigger: TCCGGGAGGTGCTGCCTGCCAGGGGAAGCTGGAACC...CCTGCTGGCCAGGGTGCAGCCTTGATGACACCTGCCGCTGCCCCTCGGGGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
3UTR-3UTR CCA 90 bp CCAGCCCCGAGGGGCAGCGGCAGGTGTCATCAAGGCTGCACCCTGGCCAGCAGGAAGAGAGCAGGTACCTaGGCCGTCCCTGCCCACCCA +
Preference number: 2 (lower is better)
Translates to: PAPRGSGRCHQGCTLASRKRAGT*AVPAHP
Trigger: TGGGTGGGCAGGGACGGCCCAGGTACCTGCTCTCTT...CCTGCTGGCCAGGGTGCAGCCTTGATGACACCTGCCGCTGCCCCTCGGGGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
3UTR-3UTR GCA 90 bp CCAGCCCCGAGGGGCAGCGGCAGGTGTCATCAAGGCTGCACCCTGGCCAGCAGGTGGCCTCAGTCCTCTTaGCCTTGTCCCTGTCCCTCT +
Preference number: 2 (lower is better)
Translates to: PAPRGSGRCHQGCTLASRWPQSS*PCPCPS
Trigger: AGAGGGACAGGGACAAGGGCAAGAGGACTGAGGCCA...CCTGCTGGCCAGGGTGCAGCCTTGATGACACCTGCCGCTGCCCCTCGGGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
3UTR-3UTR CCA 90 bp TCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGGGAGCCCCCGAGACCTaGCCCACAGCGCCCACAGCA +
Preference number: 2 (lower is better)
Translates to: SGLISGSLLLVPASPGRQGAPET*PTAPTA
Trigger: TGCTGTGGGCGCTGTGGGCCAGGTCTCGGGGGCTCC...CTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
3UTR-3UTR CCA 90 bp AAGTGTGAGGCCCCATCCCGGGGGTCTCTGACATTGGCCTTGCTCTGGCCTCAGGGAGCCCCCGAGACCTaGCCCACAGCGCCCACAGCA +
Preference number: 2 (lower is better)
Translates to: KCEAPSRGSLTLALLWPQGAPET*PTAPTA
Trigger: TGCTGTGGGCGCTGTGGGCCAGGTCTCGGGGGCTCC...CTGAGGCCAGAGCAAGGCCAATGTCAGAGACCCCCGGGATGGGGCCTCACACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
3UTR-3UTR CCA 90 bp GCTGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGCGGGCTCCTTGCTACTaGTTCCAGCTTCCCCTGGCA +
Preference number: 2 (lower is better)
Translates to: AAPWPAGTHSGQVSWFWGRAPCY*FQLPLA
Trigger: TGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCG...CCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
3UTR-3UTR CCA 90 bp CCAGCCCCGAGGGGCAGCGGCAGGTGTCATCAAGGCTGCACCCTGGCCAGCAGGACATTGGCCTTGCTCTaGCCTCAGTCCTCTTGCCCT +
Preference number: 2 (lower is better)
Translates to: PAPRGSGRCHQGCTLASRTLALL*PQSSCP
Trigger: AGGGCAAGAGGACTGAGGCCAGAGCAAGGCCAATGT...CCTGCTGGCCAGGGTGCAGCCTTGATGACACCTGCCGCTGCCCCTCGGGGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
3UTR-3UTR CCA 90 bp TTCCAGCCCCGAGGGGCAGCGGCAGGTGTCATCAAGGCTGCACCCTGGCCAGCATCTGGCCAGGTGAGCTaGTTCTGGGGGTGGCAAGTG +
Preference number: 2 (lower is better)
Translates to: FQPRGAAAGVIKAAPWPASGQVS*FWGWQV
Trigger: CACTTGCCACCCCCAGAACCAGCTCACCTGGCCAGA...TGCTGGCCAGGGTGCAGCCTTGATGACACCTGCCGCTGCCCCTCGGGGCTGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
3UTR-3UTR GCA 90 bp TGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGTGTGGCCTCAGTCCTCTTaGCCTTGTCCCTGTCCCTCT +
Preference number: 2 (lower is better)
Translates to: CTLASRNPLWPGELVLGVWPQSS*PCPCPS
Trigger: AGAGGGACAGGGACAAGGGCAAGAGGACTGAGGCCA...CACCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
3UTR-3UTR CCA 90 bp AAGTGTGAGGCCCCATCCCGGGGGTCTCTGACATTGGCCTTGCTCTGGCCTCAGAAGAGAGCAGGTACCTaGGCCGTCCCTGCCCACCCA +
Preference number: 2 (lower is better)
Translates to: KCEAPSRGSLTLALLWPQKRAGT*AVPAHP
Trigger: TGGGTGGGCAGGGACGGCCCAGGTACCTGCTCTCTT...CTGAGGCCAGAGCAAGGCCAATGTCAGAGACCCCCGGGATGGGGCCTCACACTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
3UTR-3UTR CAA 90 bp CCAGCCCCGAGGGGCAGCGGCAGGTGTCATCAAGGCTGCACCCTGGCCAGCAGGCGGGGGTCTCTGACATaGGCCTTGCTCTGGCCTCAG +
Preference number: 3 (lower is better)
Translates to: PAPRGSGRCHQGCTLASRRGSLT*ALLWPQ
Trigger: CTGAGGCCAGAGCAAGGCCAATGTCAGAGACCCCCG...CCTGCTGGCCAGGGTGCAGCCTTGATGACACCTGCCGCTGCCCCTCGGGGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
3UTR CCA 72 bp CGAGGGGCAGCGGCAGGTGTCATCAAGGCTGCACCCTaGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGG +
Preference number: 3 (lower is better)
Translates to: RGAAAGVIKAAP*PAGTHSGQVSW
Trigger: CCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCAGCCTTGATGACACCTGCCGCTGCCCCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
3UTR-3UTR CAA 90 bp CTGGGCCGTCCCTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTaGCTACTGGTTCCAGCTTCC +
Preference number: 3 (lower is better)
Translates to: LGRPCPPKAPREYTVSSGLISGS*LLVPAS
Trigger: GGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAG...CCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAGGGACGGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp TTCCAGCCCCGAGGGGCAGCGGCAGGTGTCATCAAGGCTGCACCCTGGCCAGCACCCCTCCACCCCTCCTaGCACCCGGCTGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: FQPRGAAAGVIKAAPWPAPLHPS*HPAAGG
Trigger: GCCTCCTGCAGCCGGGTGCCAGGAGGGGTGGAGGGG...TGCTGGCCAGGGTGCAGCCTTGATGACACCTGCCGCTGCCCCTCGGGGCTGGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR GCA 90 bp TCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCTCCCGGCGGGTGGCCTCTGCCTaGCCCACGTCGGTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: SRAPCYWFQLPLAGSTSRRVASA*PTSVGG
Trigger: GCCACCCACCGACGTGGGGCAGGCAGAGGCCACCCG...CCGGGAGGTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp CCAGCCCCGAGGGGCAGCGGCAGGTGTCATCAAGGCTGCACCCTGGCCAGCAGGGGGAGCCACGGCCAGTaGAGACGCCTCCTGGAACTC +
Preference number: 4 (lower is better)
Translates to: PAPRGSGRCHQGCTLASRGSHGQ*RRLLEL
Trigger: GAGTTCCAGGAGGCGTCTGCACTGGCCGTGGCTCCC...CCTGCTGGCCAGGGTGCAGCCTTGATGACACCTGCCGCTGCCCCTCGGGGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp CCAGCCCCGAGGGGCAGCGGCAGGTGTCATCAAGGCTGCACCCTGGCCAGCAGGGCTGGGACTCTGGCCTaGCCCTACCTCCCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: PAPRGSGRCHQGCTLASRAGTLA*PYLPVS
Trigger: GCTCACAGGGAGGTAGGGGCAGGCCAGAGTCCCAGC...CCTGCTGGCCAGGGTGCAGCCTTGATGACACCTGCCGCTGCCCCTCGGGGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp GCTGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGGGAGCCCCCGAGACCTaGCCCACAGCGCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: AAPWPAGTHSGQVSWFWGGAPET*PTAPTA
Trigger: TGCTGTGGGCGCTGTGGGCCAGGTCTCGGGGGCTCC...CCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCAGC
70% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp TTCCAGCCCCGAGGGGCAGCGGCAGGTGTCATCAAGGCTGCACCCTGGCCAGCAGGGCCTATACTCCTGTaGCAGCCCCCGCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: FQPRGAAAGVIKAAPWPAGPILL*QPPLGA
Trigger: GGCCCCCAGCGGGGGCTGCCACAGGAGTATAGGCCC...TGCTGGCCAGGGTGCAGCCTTGATGACACCTGCCGCTGCCCCTCGGGGCTGGAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR GCA 90 bp GGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCAGGCCCAGTCGTGCTaGTCAGGGGCCGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: GLISGSLLLVPASPGRQHQAQSC*SGAAQG
Trigger: CCCCTGGGCGGCCCCTGAGCAGCACGACTGGGCCTG...GTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR GCA 90 bp TTCCAGCCCCGAGGGGCAGCGGCAGGTGTCATCAAGGCTGCACCCTGGCCAGCACTTCAGGCCCAGTCGTaGTGCTCAGGGGCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: FQPRGAAAGVIKAAPWPALQAQS*CSGAAQ
Trigger: CTGGGCGGCCCCTGAGCAGCACGACTGGGCCTGAAG...TGCTGGCCAGGGTGCAGCCTTGATGACACCTGCCGCTGCCCCTCGGGGCTGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR GCA 90 bp CCAGCCCCGAGGGGCAGCGGCAGGTGTCATCAAGGCTGCACCCTGGCCAGCAGGCTCCTGGCACCCGGCTaGAGGAGGCACCCACATTTG +
Preference number: 4 (lower is better)
Translates to: PAPRGSGRCHQGCTLASRLLAPG*RRHPHL
Trigger: CAAATGTGGGTGCCTCCTGCAGCCGGGTGCCAGGAG...CCTGCTGGCCAGGGTGCAGCCTTGATGACACCTGCCGCTGCCCCTCGGGGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp TCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCTCCCGGCCCCACGTCGGTGGGTaGCCTCTGGGCCAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: SRAPCYWFQLPLAGSTSRPHVGG*PLGQGS
Trigger: ACTGCCCTGGCCCAGAGGCCACCCACCGACGTGGGG...CCGGGAGGTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR TCA 90 bp GCTGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGCCATGGGGGCAGGGGTaGAGGATGTCACGGCCGCAT +
Preference number: 4 (lower is better)
Translates to: AAPWPAGTHSGQVSWFWGPWGQG*RMSRPH
Trigger: ATGCGGCCGTGACATCCTTCACCCCTGCCCCCATGG...CCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000319838.10
CDS-3UTR TCA 90 bp GCTGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGGCACAGCGGCGTGTCTaGGGTGTCTCGCAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: AAPWPAGTHSGQVSWFWGAQRRV*GVSQGV
Trigger: CACTCCCTGCGAGACACCTCAGACACGCCGCTGTGC...CCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCAGC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
CDS-3UTR TCA 90 bp TCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCTCCCGGCCACCAGGGAGCCGATaGCCAGCACCCAGAGGACCG +
Preference number: 4 (lower is better)
Translates to: SRAPCYWFQLPLAGSTSRPPGSR*PAPRGP
Trigger: CGGTCCTCTGGGTGCTGGTCATCGGCTCCCTGGTGG...CCGGGAGGTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR TCA 90 bp TTCCAGCCCCGAGGGGCAGCGGCAGGTGTCATCAAGGCTGCACCCTGGCCAGCACAGAAGCCGCCCTCCTaGATCCCCAGGAGCCAGCGA +
Preference number: 4 (lower is better)
Translates to: FQPRGAAAGVIKAAPWPAQKPPS*IPRSQR
Trigger: TCGCTGGCTCCTGGGGATTCAGGAGGGCGGCTTCTG...TGCTGGCCAGGGTGCAGCCTTGATGACACCTGCCGCTGCCCCTCGGGGCTGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
CDS-3UTR TCA 90 bp TTCCAGCCCCGAGGGGCAGCGGCAGGTGTCATCAAGGCTGCACCCTGGCCAGCAAGACGGAGCTGCTGGTaGGCGCCCAGAGTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: FQPRGAAAGVIKAAPWPARRSCW*APRVQD
Trigger: GTCCTGGACTCTGGGCGCTCACCAGCAGCTCCGTCT...TGCTGGCCAGGGTGCAGCCTTGATGACACCTGCCGCTGCCCCTCGGGGCTGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR TCA 90 bp TTCCAGCCCCGAGGGGCAGCGGCAGGTGTCATCAAGGCTGCACCCTGGCCAGCACAGGGATTCACCCCTTaGGCTCCCAGGGGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: FQPRGAAAGVIKAAPWPAQGFTP*APRGQS
Trigger: GCTCTGGCCCCTGGGAGCTCAAGGGGTGAATCCCTG...TGCTGGCCAGGGTGCAGCCTTGATGACACCTGCCGCTGCCCCTCGGGGCTGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR GCA 90 bp GGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCTTGCGGGTGGCCTCTaGCTGCCCCACGTCGGTGGG +
Preference number: 4 (lower is better)
Translates to: GLISGSLLLVPASPGRQHLAGGL*LPHVGG
Trigger: CCCACCGACGTGGGGCAGGCAGAGGCCACCCGCAAG...GTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp TCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCTCCCGGGGCGTTCCAGCCCACTaGGAGGCGCACTGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: SRAPCYWFQLPLAGSTSRGVPAH*EAHCQP
Trigger: GGGCTGACAGTGCGCCTCGCAGTGGGCTGGAACGCC...CCGGGAGGTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp TTCCAGCCCCGAGGGGCAGCGGCAGGTGTCATCAAGGCTGCACCCTGGCCAGCAGGGAGCCACGGCCAGTaGAGACGCCTCCTGGAACTC +
Preference number: 4 (lower is better)
Translates to: FQPRGAAAGVIKAAPWPAGSHGQ*RRLLEL
Trigger: GAGTTCCAGGAGGCGTCTGCACTGGCCGTGGCTCCC...TGCTGGCCAGGGTGCAGCCTTGATGACACCTGCCGCTGCCCCTCGGGGCTGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp CCAGCCCCGAGGGGCAGCGGCAGGTGTCATCAAGGCTGCACCCTGGCCAGCAGGATCGCTCCCCATGGCTaGCAAGGGGCTCTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: PAPRGSGRCHQGCTLASRIAPHG*QGALRS
Trigger: TGACCTGAGAGCCCCTTGGCAGCCATGGGGAGCGAT...CCTGCTGGCCAGGGTGCAGCCTTGATGACACCTGCCGCTGCCCCTCGGGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp TCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCTCCCGGTCGGTGGGTGGCCTCTaGGCCAGGGCAGTCACCACC +
Preference number: 4 (lower is better)
Translates to: SRAPCYWFQLPLAGSTSRSVGGL*ARAVTT
Trigger: GGTGGTGACTGCCCTGGCCCAGAGGCCACCCACCGA...CCGGGAGGTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp GCTGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGGGTTCCAGCTTCCCCTaGCAGGCAGCACCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: AAPWPAGTHSGQVSWFWGGSSFP*QAAPPG
Trigger: TCCGGGAGGTGCTGCCTGCCAGGGGAAGCTGGAACC...CCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCAGC
68% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp TGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGTGTGTGGCAGCCCCCGCTaGGGGCCAGGAGATCCCAGA +
Preference number: 4 (lower is better)
Translates to: CTLASRNPLWPGELVLGVCGSPR*GPGDPR
Trigger: TCTGGGATCTCCTGGCCCCCAGCGGGGGCTGCCACA...CACCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR TCA 90 bp AAGTGTGAGGCCCCATCCCGGGGGTCTCTGACATTGGCCTTGCTCTGGCCTCAGTCGCTGGGGGCCAGGTaGGGTCGCTGGAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: KCEAPSRGSLTLALLWPQSLGAR*GRWSHR
Trigger: CCTGTGGCTCCAGCGACCTCACCTGGCCCCCAGCGA...CTGAGGCCAGAGCAAGGCCAATGTCAGAGACCCCCGGGATGGGGCCTCACACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR TCA 90 bp TGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGTGGCACAGCGGCGTGTCTaGGGTGTCTCGCAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: CTLASRNPLWPGELVLGVAQRRV*GVSQGV
Trigger: CACTCCCTGCGAGACACCTCAGACACGCCGCTGTGC...CACCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
CDS-3UTR TCA 90 bp TCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCTCCCGGCAGAAGCCGCCCTCCTaGATCCCCAGGAGCCAGCGA +
Preference number: 4 (lower is better)
Translates to: SRAPCYWFQLPLAGSTSRQKPPS*IPRSQR
Trigger: TCGCTGGCTCCTGGGGATTCAGGAGGGCGGCTTCTG...CCGGGAGGTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR TCA 90 bp TGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGTGTGTGCCGGGTGCTCCTaGAGCAGAAGCCGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: CTLASRNPLWPGELVLGVCAGCS*SRSRPP
Trigger: AGGAGGGCGGCTTCTGCTTCAGGAGCACCCGGCACA...CACCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
CDS-3UTR TCA 90 bp TGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGTGCTTTTGGAGGGACCCTaGGCCAGGCCAGGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: CTLASRNPLWPGELVLGVLLEGP*ARPGSE
Trigger: CTCGGAGCCTGGCCTGGCTCAGGGTCCCTCCAAAAG...CACCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR TCA 90 bp TGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGTGCTGCCTGCATCAGCCTaGGGCCCCATCCCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: CTLASRNPLWPGELVLGVLPASA*GPIPVP
Trigger: TGGGACTGGGATGGGGCCTCAGGCTGATGCAGGCAG...CACCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR GCA 90 bp TTCCAGCCCCGAGGGGCAGCGGCAGGTGTCATCAAGGCTGCACCCTGGCCAGCACGGGTCTCCGTCCACTaGTGCATGCGGCAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: FQPRGAAAGVIKAAPWPARVSVH*CMRQQN
Trigger: GTTCTGCTGCCGCATGCAGCAGTGGACGGAGACCCG...TGCTGGCCAGGGTGCAGCCTTGATGACACCTGCCGCTGCCCCTCGGGGCTGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp AGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCGGGTGGCCTCTGCCTaGCCCACGTCGGTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: SSGLISGSLLLVPASPGRRVASA*PTSVGG
Trigger: GCCACCCACCGACGTGGGGCAGGCAGAGGCCACCCG...CCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp AAGTGTGAGGCCCCATCCCGGGGGTCTCTGACATTGGCCTTGCTCTGGCCTCAGCTTGCGGGTGGCCTCTaGCTGCCCCACGTCGGTGGG +
Preference number: 4 (lower is better)
Translates to: KCEAPSRGSLTLALLWPQLAGGL*LPHVGG
Trigger: CCCACCGACGTGGGGCAGGCAGAGGCCACCCGCAAG...CTGAGGCCAGAGCAAGGCCAATGTCAGAGACCCCCGGGATGGGGCCTCACACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp TCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCTCCCGGGCCCAGCTTGATCGCTaGGGGCCAGGTGAGGTCGCT +
Preference number: 4 (lower is better)
Translates to: SRAPCYWFQLPLAGSTSRAQLDR*GPGEVA
Trigger: AGCGACCTCACCTGGCCCCCAGCGATCAAGCTGGGC...CCGGGAGGTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp TGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGTGGCCCAGCTTGATCGCTaGGGGCCAGGTGAGGTCGCT +
Preference number: 4 (lower is better)
Translates to: CTLASRNPLWPGELVLGVAQLDR*GPGEVA
Trigger: AGCGACCTCACCTGGCCCCCAGCGATCAAGCTGGGC...CACCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp AGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCAGGGCAGCCTTGCGGGTaGCCTCTGCCTGCCCCACGT +
Preference number: 4 (lower is better)
Translates to: RADLGLLATGSSFPWQAAGQPCG*PLPAPR
Trigger: ACGTGGGGCAGGCAGAGGCCACCCGCAAGGCTGCCC...TGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp CCAGCCCCGAGGGGCAGCGGCAGGTGTCATCAAGGCTGCACCCTGGCCAGCAGGGAGTCCTGGCTTTTGTaGGCCTTAGCACTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: PAPRGSGRCHQGCTLASRESWLL*ALALGA
Trigger: GGCTCCCAGTGCTAAGGCCCACAAAAGCCAGGACTC...CCTGCTGGCCAGGGTGCAGCCTTGATGACACCTGCCGCTGCCCCTCGGGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp TGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGTGGGTTCCAGCTTCCCCTaGCAGGCAGCACCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: CTLASRNPLWPGELVLGVGSSFP*QAAPPG
Trigger: TCCGGGAGGTGCTGCCTGCCAGGGGAAGCTGGAACC...CACCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp TGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGTGGGACAGCTGGGACTCTaGCCTGCCCCTACCTCCCTG +
Preference number: 4 (lower is better)
Translates to: CTLASRNPLWPGELVLGVGQLGL*PAPTSL
Trigger: CAGGGAGGTAGGGGCAGGCCAGAGTCCCAGCTGTCC...CACCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp GCTGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGCACTCTGCCCACCTCTaGGCAGGGATGTGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: AAPWPAGTHSGQVSWFWGHSAHL*AGMWEE
Trigger: CTCCTCCCACATCCCTGCCCAGAGGTGGGCAGAGTG...CCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR TCA 90 bp AGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGTCGCTGGGGGCCAGGTaGGGTCGCTGGAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: SSGLISGSLLLVPASPGRSLGAR*GRWSHR
Trigger: CCTGTGGCTCCAGCGACCTCACCTGGCCCCCAGCGA...CCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR TCA 90 bp CTGGGCCGTCCCTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGTCGCTGGGGGCCAGGTaGGGTCGCTGGAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: LGRPCPPKAPREYTVSSGSLGAR*GRWSHR
Trigger: CCTGTGGCTCCAGCGACCTCACCTGGCCCCCAGCGA...CCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAGGGACGGCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR TCA 90 bp AAGTGTGAGGCCCCATCCCGGGGGTCTCTGACATTGGCCTTGCTCTGGCCTCAGCCACCAGGGAGCCGATaGCCAGCACCCAGAGGACCG +
Preference number: 4 (lower is better)
Translates to: KCEAPSRGSLTLALLWPQPPGSR*PAPRGP
Trigger: CGGTCCTCTGGGTGCTGGTCATCGGCTCCCTGGTGG...CTGAGGCCAGAGCAAGGCCAATGTCAGAGACCCCCGGGATGGGGCCTCACACTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR TCA 90 bp GGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCAGAAGCCGCCCTCCTaGATCCCCAGGAGCCAGCGA +
Preference number: 4 (lower is better)
Translates to: GLISGSLLLVPASPGRQHQKPPS*IPRSQR
Trigger: TCGCTGGCTCCTGGGGATTCAGGAGGGCGGCTTCTG...GTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR TCA 90 bp TCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCTCCCGGCATCCCGGGGGTCTCTaGCATTGGCCTTGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SRAPCYWFQLPLAGSTSRHPGGL*HWPCSG
Trigger: GCCAGAGCAAGGCCAATGTCAGAGACCCCCGGGATG...CCGGGAGGTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp AGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCTTGCGGGTGGCCTCTaGCTGCCCCACGTCGGTGGG +
Preference number: 4 (lower is better)
Translates to: SSGLISGSLLLVPASPGRLAGGL*LPHVGG
Trigger: CCCACCGACGTGGGGCAGGCAGAGGCCACCCGCAAG...CCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp AGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCAGGCGTTCCAGCCCACTaGGAGGCGCACTGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: RADLGLLATGSSFPWQAAGVPAH*EAHCQP
Trigger: GGGCTGACAGTGCGCCTCGCAGTGGGCTGGAACGCC...TGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp TCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCTCCCGGAGCCCTTCCCCCGAGTaGAAAGTGCTGCACGCCCAG +
Preference number: 4 (lower is better)
Translates to: SRAPCYWFQLPLAGSTSRSPSPE*KVLHAQ
Trigger: CTGGGCGTGCAGCACTTTGCACTCGGGGGAAGGGCT...CCGGGAGGTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp AGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCATCGGTGGGTGGCCTCTaGGCCAGGGCAGTCACCACC +
Preference number: 4 (lower is better)
Translates to: RADLGLLATGSSFPWQAASVGGL*ARAVTT
Trigger: GGTGGTGACTGCCCTGGCCCAGAGGCCACCCACCGA...TGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp GAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGCCCCACGTCGGTGGGTaGCCTCTGGGCCAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: EFRADLGLLATGSSFPWQPHVGG*PLGQGS
Trigger: ACTGCCCTGGCCCAGAGGCCACCCACCGACGTGGGG...CTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp AGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGGGGCAGCCTTGCGGGTaGCCTCTGCCTGCCCCACGT +
Preference number: 4 (lower is better)
Translates to: SSGLISGSLLLVPASPGRGQPCG*PLPAPR
Trigger: ACGTGGGGCAGGCAGAGGCCACCCGCAAGGCTGCCC...CCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp TTCCAGCCCCGAGGGGCAGCGGCAGGTGTCATCAAGGCTGCACCCTGGCCAGCACGGGCTCCTTGCTACTaGTTCCAGCTTCCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: FQPRGAAAGVIKAAPWPARAPCY*FQLPLA
Trigger: TGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCG...TGCTGGCCAGGGTGCAGCCTTGATGACACCTGCCGCTGCCCCTCGGGGCTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp TCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCTCCCGGAAGAGAGCAGGTACCTaGGCCGTCCCTGCCCACCCA +
Preference number: 4 (lower is better)
Translates to: SRAPCYWFQLPLAGSTSRKRAGT*AVPAHP
Trigger: TGGGTGGGCAGGGACGGCCCAGGTACCTGCTCTCTT...CCGGGAGGTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp AAGTGTGAGGCCCCATCCCGGGGGTCTCTGACATTGGCCTTGCTCTGGCCTCAGTGGGACCCTGCCTCGTaGGAGGTGAGGACCCGAGGG +
Preference number: 4 (lower is better)
Translates to: KCEAPSRGSLTLALLWPQWDPAS*EVRTRG
Trigger: CCCTCGGGTCCTCACCTCCCACGAGGCAGGGTCCCA...CTGAGGCCAGAGCAAGGCCAATGTCAGAGACCCCCGGGATGGGGCCTCACACTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp GGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACGCAGGCACTGTGCGTTaGGGAGGGCTCCGTGCGACT +
Preference number: 4 (lower is better)
Translates to: GLISGSLLLVPASPGRQHAGTVR*GGLRAT
Trigger: AGTCGCACGGAGCCCTCCCCAACGCACAGTGCCTGC...GTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp TTCCAGCCCCGAGGGGCAGCGGCAGGTGTCATCAAGGCTGCACCCTGGCCAGCACGTTCCAGGGACTTTTaGAGGGACCCTGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: FQPRGAAAGVIKAAPWPARSRDF*RDPEPG
Trigger: GCCTGGCTCAGGGTCCCTCCAAAAGTCCCTGGAACG...TGCTGGCCAGGGTGCAGCCTTGATGACACCTGCCGCTGCCCCTCGGGGCTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp TCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGAGCCCCGGCTGGACCTaGGCAGGGTCTGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SGLISGSLLLVPASPGRQSPGWT*AGSGVQ
Trigger: CTGGACACCAGACCCTGCCCAGGTCCAGCCGGGGCT...CTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR TCA 90 bp AGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCATGGGGGCAGGGGTaGAGGATGTCACGGCCGCAT +
Preference number: 4 (lower is better)
Translates to: RADLGLLATGSSFPWQAAPWGQG*RMSRPH
Trigger: ATGCGGCCGTGACATCCTTCACCCCTGCCCCCATGG...TGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR TCA 90 bp AGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCATGTGCCGGGTGCTCCTaGAGCAGAAGCCGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: RADLGLLATGSSFPWQAACAGCS*SRSRPP
Trigger: AGGAGGGCGGCTTCTGCTTCAGGAGCACCCGGCACA...TGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR TCA 90 bp GGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACGGCAGGAAGACGGCTTaGGCCCAGGAGGTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: GLISGSLLLVPASPGRQHGRKTA*AQEVEA
Trigger: AGCCTCAACCTCCTGGGCTCAAGCCGTCTTCCTGCC...GTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR TCA 90 bp AGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCAAAGAACCCGGAGGGGTaGGGGCGGGAGAAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: RADLGLLATGSSFPWQAAKNPEG*GREKPL
Trigger: GAGAGGCTTCTCCCGCCCTCACCCCTCCGGGTTCTT...TGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR TCA 90 bp AAGTGTGAGGCCCCATCCCGGGGGTCTCTGACATTGGCCTTGCTCTGGCCTCAGATAGCCCAGGAAGGCTaGGACCAGCCCCGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: KCEAPSRGSLTLALLWPQIAQEG*DQPRLD
Trigger: GTCCAGCCGGGGCTGGTCTCAGCCTTCCTGGGCTAT...CTGAGGCCAGAGCAAGGCCAATGTCAGAGACCCCCGGGATGGGGCCTCACACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR TCA 90 bp GGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACGAGGTCAGCAGAGAGTaGGCAGGGGGAGCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: GLISGSLLLVPASPGRQHEVSRE*AGGARH
Trigger: GTGCCTTGCTCCCCCTGCTCACTCTCTGCTGACCTC...GTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR GCA 90 bp CCAGCCCCGAGGGGCAGCGGCAGGTGTCATCAAGGCTGCACCCTGGCCAGCAGGAGTCACCAACTGCTGTaGCTGGAGCTGGAAGTGACT +
Preference number: 4 (lower is better)
Translates to: PAPRGSGRCHQGCTLASRSHQLL*LELEVT
Trigger: AGTCACTTCCAGCTCCAGGCACAGCAGTTGGTGACT...CCTGCTGGCCAGGGTGCAGCCTTGATGACACCTGCCGCTGCCCCTCGGGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319838.10
CDS-3UTR GCA 90 bp AAGTGTGAGGCCCCATCCCGGGGGTCTCTGACATTGGCCTTGCTCTGGCCTCAGTCAGCCCAGAAGCTCTaGTGCCCCCAAGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: KCEAPSRGSLTLALLWPQSAQKL*CPQGWP
Trigger: GGGCCAGCCTTGGGGGCAGCAGAGCTTCTGGGCTGA...CTGAGGCCAGAGCAAGGCCAATGTCAGAGACCCCCGGGATGGGGCCTCACACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR GCA 90 bp GCTGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGTCAGCAGCTCTTCACTaGCACGGTGTGGAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: AAPWPAGTHSGQVSWFWGSAALH*HGVEWG
Trigger: TCCCCACTCCACACCGTGGCAGTGAAGAGCTGCTGA...CCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000430267.2
CDS-3UTR GCA 90 bp TCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCTCCCGGGTCTCCGTCCACTGCTaGATGCGGCAGCAGAACACC +
Preference number: 4 (lower is better)
Translates to: SRAPCYWFQLPLAGSTSRVSVHC*MRQQNT
Trigger: GGTGTTCTGCTGCCGCATGCAGCAGTGGACGGAGAC...CCGGGAGGTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp TCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCTCCCGGGTGTCTCGCAGGGAGTaGAGCACGAAGGGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: SRAPCYWFQLPLAGSTSRVSRRE*STKGKV
Trigger: CACCTTGCCCTTCGTGCTGCACTCCCTGCGAGACAC...CCGGGAGGTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp CTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCGGGTGGCCTCTGCCTaGCCCACGTCGGTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LPTQGSKRIHSEFRADLGRVASA*PTSVGG
Trigger: GCCACCCACCGACGTGGGGCAGGCAGAGGCCACCCG...CCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp GAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGGCGTTCCAGCCCACTaGGAGGCGCACTGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: EFRADLGLLATGSSFPWQGVPAH*EAHCQP
Trigger: GGGCTGACAGTGCGCCTCGCAGTGGGCTGGAACGCC...CTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp AAGTGTGAGGCCCCATCCCGGGGGTCTCTGACATTGGCCTTGCTCTGGCCTCAGGGGAGCCACGGCCAGTaGAGACGCCTCCTGGAACTC +
Preference number: 4 (lower is better)
Translates to: KCEAPSRGSLTLALLWPQGSHGQ*RRLLEL
Trigger: GAGTTCCAGGAGGCGTCTGCACTGGCCGTGGCTCCC...CTGAGGCCAGAGCAAGGCCAATGTCAGAGACCCCCGGGATGGGGCCTCACACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp GCTGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGCCGAGTGCAAAGTGCTaGACGCCCAGTGGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: AAPWPAGTHSGQVSWFWGPSAKC*TPSGLS
Trigger: AGAGAGACCACTGGGCGTGCAGCACTTTGCACTCGG...CCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp TCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCTCCCGGAGTATCAGGACCGGGTaGGACACGGCTCCCACCAAG +
Preference number: 4 (lower is better)
Translates to: SRAPCYWFQLPLAGSTSRSIRTG*DTAPTK
Trigger: CTTGGTGGGAGCCGTGTCCCACCCGGTCCTGATACT...CCGGGAGGTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR CCA 90 bp TGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGTGCGGCCACCGCCAGGTTaGTCATGTAGATGCGGGTCT +
Preference number: 4 (lower is better)
Translates to: CTLASRNPLWPGELVLGVRPPPG*SCRCGS
Trigger: AGACCCGCATCTACATGACCAACCTGGCGGTGGCCG...CACCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp CTGGGCCGTCCCTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGTCGGTGGGTGGCCTCTaGGCCAGGGCAGTCACCACC +
Preference number: 4 (lower is better)
Translates to: LGRPCPPKAPREYTVSSGSVGGL*ARAVTT
Trigger: GGTGGTGACTGCCCTGGCCCAGAGGCCACCCACCGA...CCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAGGGACGGCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp GGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCGAACACCAGGAGGTTaGCCCAGACCATGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: GLISGSLLLVPASPGRQHRTPGG*PRPCGQ
Trigger: CTGCCCGCATGGTCTGGGCCAACCTCCTGGTGTTCG...GTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp TGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGTGCGGGCTCCTTGCTACTaGTTCCAGCTTCCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: CTLASRNPLWPGELVLGVRAPCY*FQLPLA
Trigger: TGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCG...CACCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp TCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCTCCCGGTCTGGCCAGGTGAGCTaGTTCTGGGGGTGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: SRAPCYWFQLPLAGSTSRSGQVS*FWGWQV
Trigger: CACTTGCCACCCCCAGAACCAGCTCACCTGGCCAGA...CCGGGAGGTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp AAGTGTGAGGCCCCATCCCGGGGGTCTCTGACATTGGCCTTGCTCTGGCCTCAGAGGGCTCCGTGCGACTaGCCTCCTACTCTCCCCACC +
Preference number: 4 (lower is better)
Translates to: KCEAPSRGSLTLALLWPQRAPCD*PPTLPT
Trigger: GGTGGGGAGAGTAGGAGGCCAGTCGCACGGAGCCCT...CTGAGGCCAGAGCAAGGCCAATGTCAGAGACCCCCGGGATGGGGCCTCACACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp CTGGGCCGTCCCTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGGGACAAAGCCCAGGGTaGCCCCTCCACCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LGRPCPPKAPREYTVSSGGQSPG*PLHPSW
Trigger: CCAGGAGGGGTGGAGGGGCCACCCTGGGCTTTGTCC...CCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAGGGACGGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR TCA 90 bp AAGTGTGAGGCCCCATCCCGGGGGTCTCTGACATTGGCCTTGCTCTGGCCTCAGAGAGCGCCAGGCTGTTaGGCAGCAGGCCTAGCACCA +
Preference number: 4 (lower is better)
Translates to: KCEAPSRGSLTLALLWPQRAPGC*AAGLAP
Trigger: TGGTGCTAGGCCTGCTGCTCAACAGCCTGGCGCTCT...CTGAGGCCAGAGCAAGGCCAATGTCAGAGACCCCCGGGATGGGGCCTCACACTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR TCA 90 bp GAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCACAGCGGCGTGTCTaGGGTGTCTCGCAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: EFRADLGLLATGSSFPWQAQRRV*GVSQGV
Trigger: CACTCCCTGCGAGACACCTCAGACACGCCGCTGTGC...CTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR TCA 90 bp AGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGGCACAGCGGCGTGTCTaGGGTGTCTCGCAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: SSGLISGSLLLVPASPGRAQRRV*GVSQGV
Trigger: CACTCCCTGCGAGACACCTCAGACACGCCGCTGTGC...CCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR TCA 90 bp AGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGTGTGCCGGGTGCTCCTaGAGCAGAAGCCGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: SSGLISGSLLLVPASPGRCAGCS*SRSRPP
Trigger: AGGAGGGCGGCTTCTGCTTCAGGAGCACCCGGCACA...CCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR TCA 90 bp AAGTGTGAGGCCCCATCCCGGGGGTCTCTGACATTGGCCTTGCTCTGGCCTCAGCATCCCGGGGGTCTCTaGCATTGGCCTTGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: KCEAPSRGSLTLALLWPQHPGGL*HWPCSG
Trigger: GCCAGAGCAAGGCCAATGTCAGAGACCCCCGGGATG...CTGAGGCCAGAGCAAGGCCAATGTCAGAGACCCCCGGGATGGGGCCTCACACTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR TCA 90 bp GAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGCCACCCACCCAGTCCTaGGCTCTGGAGGTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: EFRADLGLLATGSSFPWQPPTQS*ALEVLP
Trigger: AGGCAGGACCTCCAGAGCTCAGGACTGGGTGGGTGG...CTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR GCA 90 bp AGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGTCAGCCCAGAAGCTCTaGTGCCCCCAAGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: SSGLISGSLLLVPASPGRSAQKL*CPQGWP
Trigger: GGGCCAGCCTTGGGGGCAGCAGAGCTTCTGGGCTGA...CCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR GCA 90 bp TCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCGGGTCTCCGTCCACTaGTGCATGCGGCAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: SGLISGSLLLVPASPGRQRVSVH*CMRQQN
Trigger: GTTCTGCTGCCGCATGCAGCAGTGGACGGAGACCCG...CTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp TCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGGAGGGGGAGGGGGTCTaGACAGCTAGAGGGCGATTC +
Preference number: 4 (lower is better)
Translates to: SGLISGSLLLVPASPGRQEGEGV*TARGRF
Trigger: GAATCGCCCTCTAGCTGTGCAGACCCCCTCCCCCTC...CTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp GGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCGGGCTCTGCCAAACTaGGTCCTCTGCTCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: GLISGSLLLVPASPGRQHRALPN*VLCSGS
Trigger: AGACCCTGAGCAGAGGACCCAGTTTGGCAGAGCCCG...GTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR CCA 90 bp CTGGGCCGTCCCTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGGCCCAGCTTGATCGCTaGGGGCCAGGTGAGGTCGCT +
Preference number: 4 (lower is better)
Translates to: LGRPCPPKAPREYTVSSGAQLDR*GPGEVA
Trigger: AGCGACCTCACCTGGCCCCCAGCGATCAAGCTGGGC...CCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAGGGACGGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp GGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCGGCCACCGCCAGGTTaGTCATGTAGATGCGGGTCT +
Preference number: 4 (lower is better)
Translates to: GLISGSLLLVPASPGRQHRPPPG*SCRCGS
Trigger: AGACCCGCATCTACATGACCAACCTGGCGGTGGCCG...GTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp TCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGATGCCCTGGGAGAGCTaGCACAGCGGCGTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: SGLISGSLLLVPASPGRQMPWES*HSGVSE
Trigger: CTCAGACACGCCGCTGTGCCAGCTCTCCCAGGGCAT...CTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp TCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCGAACACCAGGAGGTTaGCCCAGACCATGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: SGLISGSLLLVPASPGRQRTPGG*PRPCGQ
Trigger: CTGCCCGCATGGTCTGGGCCAACCTCCTGGTGTTCG...CTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp TCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCTCCCGGCGTCCAGGCAGCAGTTaGCATCTGAGAGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SRAPCYWFQLPLAGSTSRRPGSS*HLRACW
Trigger: CCAGCAAGCTCTCAGATGCCAACTGCTGCCTGGACG...CCGGGAGGTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp CTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGGGAGCCCCCGAGACCTaGCCCACAGCGCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: LPTQGSKRIHSEFRADLGGAPET*PTAPTA
Trigger: TGCTGTGGGCGCTGTGGGCCAGGTCTCGGGGGCTCC...CCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp GGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCGGGCTCCTTGCTACTaGTTCCAGCTTCCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: GLISGSLLLVPASPGRQHRAPCY*FQLPLA
Trigger: TGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCG...GTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp TTCCAGCCCCGAGGGGCAGCGGCAGGTGTCATCAAGGCTGCACCCTGGCCAGCAACATTGGCCTTGCTCTaGCCTCAGTCCTCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: FQPRGAAAGVIKAAPWPATLALL*PQSSCP
Trigger: AGGGCAAGAGGACTGAGGCCAGAGCAAGGCCAATGT...TGCTGGCCAGGGTGCAGCCTTGATGACACCTGCCGCTGCCCCTCGGGGCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp GCTGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGACATTGGCCTTGCTCTaGCCTCAGTCCTCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: AAPWPAGTHSGQVSWFWGTLALL*PQSSCP
Trigger: AGGGCAAGAGGACTGAGGCCAGAGCAAGGCCAATGT...CCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp AAGTGTGAGGCCCCATCCCGGGGGTCTCTGACATTGGCCTTGCTCTGGCCTCAGCGCATTTCCCCACGGTaGTCCCCGGGAACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: KCEAPSRGSLTLALLWPQRISPR*SPGTPG
Trigger: ACCTGGAGTTCCCGGGGACCACCGTGGGGAAATGCG...CTGAGGCCAGAGCAAGGCCAATGTCAGAGACCCCCGGGATGGGGCCTCACACTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp TGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGTGCATCAGGCTGTCCTCTaGGGCATCCTGCAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: CTLASRNPLWPGELVLGVHQAVL*GILQWL
Trigger: AAGCCACTGCAGGATGCCCCAGAGGACAGCCTGATG...CACCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp TCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCTCCCGGACACGTCCCACCACCTaGGTTACTCAGTGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: SRAPCYWFQLPLAGSTSRTRPTT*VTQWVQ
Trigger: CTGGACCCACTGAGTAACCCAGGTGGTGGGACGTGT...CCGGGAGGTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp AGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCTCTGGGCAGGGATGTaGGAGGAGGTGAGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: SSGLISGSLLLVPASPGRLWAGM*EEVSPD
Trigger: GTCGGGGCTCACCTCCTCCCACATCCCTGCCCAGAG...CCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR TCA 90 bp CCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGTCGCTGGGGGCCAGGTaGGGTCGCTGGAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: PKAPREYTVSSGLISGSLSLGAR*GRWSHR
Trigger: CCTGTGGCTCCAGCGACCTCACCTGGCCCCCAGCGA...CAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR TCA 90 bp AGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGAGAGCGCCAGGCTGTTaGGCAGCAGGCCTAGCACCA +
Preference number: 4 (lower is better)
Translates to: SSGLISGSLLLVPASPGRRAPGC*AAGLAP
Trigger: TGGTGCTAGGCCTGCTGCTCAACAGCCTGGCGCTCT...CCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR TCA 90 bp CTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCCACCAGGGAGCCGATaGCCAGCACCCAGAGGACCG +
Preference number: 4 (lower is better)
Translates to: LPTQGSKRIHSEFRADLGPPGSR*PAPRGP
Trigger: CGGTCCTCTGGGTGCTGGTCATCGGCTCCCTGGTGG...CCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR TCA 90 bp AGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCATTTGCTGCCCCACCTTaGGTAGAGGCAGCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: RADLGLLATGSSFPWQAAFAAPP*VEAAWD
Trigger: GTCCCAGGCTGCCTCTACTCAAGGTGGGGCAGCAAA...TGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR TCA 90 bp GCTGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGCCTACTCTCCCCACCTaGGTACTTGAATCCACCAGA +
Preference number: 4 (lower is better)
Translates to: AAPWPAGTHSGQVSWFWGPTLPT*VLESTR
Trigger: TCTGGTGGATTCAAGTACTCAGGTGGGGAGAGTAGG...CCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR TCA 90 bp AGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGGTCCCCAGTCCATaGGGGATGGAGGGCACAGGT +
Preference number: 4 (lower is better)
Translates to: SSGLISGSLLLVPASPGRQVPSP*GMEGTG
Trigger: ACCTGTGCCCTCCATCCCTCATGGACTGGGGACCTG...CCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR TCA 90 bp GAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCCCAGGGGTGGAGCTaGGTATCCTCCTCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: EFRADLGLLATGSSFPWQAQGWS*VSSSPS
Trigger: TGACGGAGAGGAGGATACTCAGCTCCACCCCTGGGC...CTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR GCA 90 bp TGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGTGCAAGGAGTCACCAACTaGTGTGCCTGGAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: CTLASRNPLWPGELVLGVQGVTN*CAWSWK
Trigger: CTTCCAGCTCCAGGCACAGCAGTTGGTGACTCCTTG...CACCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319838.10
CDS-3UTR GCA 90 bp TCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCTCCCGGTGTTGGTCAGGTAGATaGCCTGGGAGAGCTGGCACA +
Preference number: 4 (lower is better)
Translates to: SRAPCYWFQLPLAGSTSRCWSGR*PGRAGT
Trigger: TGTGCCAGCTCTCCCAGGGCATCTACCTGACCAACA...CCGGGAGGTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp TGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGTGGGGCGATTCTTTTGCTaGCCCACCTTGAGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: CTLASRNPLWPGELVLGVGRFFC*PTLSRG
Trigger: GCCTCTACTCAAGGTGGGGCAGCAAAAGAATCGCCC...CACCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR GCA 90 bp CTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCAGCCTTGGGCGGTGTaGAGACCTGGAGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LPTQGSKRIHSEFRADLGQPWAV*RPGGGG
Trigger: CCCTCCCCCTCCAGGTCTGCACACCGCCCAAGGCTG...CCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR GCA 90 bp GGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCCCAAACCCCGTGACTaGAGCTGCTGGGGACCATTA +
Preference number: 4 (lower is better)
Translates to: GLISGSLLLVPASPGRQHPKPRD*SCWGPL
Trigger: TAATGGTCCCCAGCAGCTGCAGTCACGGGGTTTGGG...GTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR GCA 90 bp TCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCTCCCGGCCTCATCATAAGGGGTaGTGGTGTCACACGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SRAPCYWFQLPLAGSTSRPHHKG*WCHTQA
Trigger: TGCCTGCGTGTGACACCAGCACCCCTTATGATGAGG...CCGGGAGGTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR GCA 90 bp AGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGGAGCTCTGGAGGTCCTaGCTGCATCAGCCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: SSGLISGSLLLVPASPGRELWRS*LHQPEA
Trigger: GGCCTCAGGCTGATGCAGGCAGGACCTCCAGAGCTC...CCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp TGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGTGAGGCTGGCCCAAGCCTaGAGGACTGTGAAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: CTLASRNPLWPGELVLGVRLAQA*RTVKEK
Trigger: CTTCTCTTTCACAGTCCTCCAGGCTTGGGCCAGCCT...CACCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319838.10
CDS-3UTR CCA 90 bp TTCCAGCCCCGAGGGGCAGCGGCAGGTGTCATCAAGGCTGCACCCTGGCCAGCACAGTGGGCAGCAAGATaGTGGAAAGTGATGCGTCCA +
Preference number: 4 (lower is better)
Translates to: FQPRGAAAGVIKAAPWPAQWAAR*WKVMRP
Trigger: TGGACGCATCACTTTCCACCATCTTGCTGCCCACTG...TGCTGGCCAGGGTGCAGCCTTGATGACACCTGCCGCTGCCCCTCGGGGCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319838.10
CDS-3UTR CCA 90 bp TCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCTCCCGGTCCAGCTCCCCCAGGTaGCTGTTGGTAGAGTTTCAG +
Preference number: 4 (lower is better)
Translates to: SRAPCYWFQLPLAGSTSRSSSPR*LLVEFQ
Trigger: CTGAAACTCTACCAACAGCCACCTGGGGGAGCTGGA...CCGGGAGGTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319838.10
CDS-3UTR CCA 90 bp AGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACGGCCACCGCCAGGTTaGTCATGTAGATGCGGGTCT +
Preference number: 4 (lower is better)
Translates to: RADLGLLATGSSFPWQAARPPPG*SCRCGS
Trigger: AGACCCGCATCTACATGACCAACCTGGCGGTGGCCG...TGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp GAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGATGCCCTGGGAGAGCTaGCACAGCGGCGTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: EFRADLGLLATGSSFPWQMPWES*HSGVSE
Trigger: CTCAGACACGCCGCTGTGCCAGCTCTCCCAGGGCAT...CTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp AGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGATGCCCTGGGAGAGCTaGCACAGCGGCGTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: SSGLISGSLLLVPASPGRMPWES*HSGVSE
Trigger: CTCAGACACGCCGCTGTGCCAGCTCTCCCAGGGCAT...CCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp TTCCAGCCCCGAGGGGCAGCGGCAGGTGTCATCAAGGCTGCACCCTGGCCAGCATGCTCATGTACCTGTTaGTCAGGTAGATGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: FQPRGAAAGVIKAAPWPACSCTC*SGRCPG
Trigger: CCCAGGGCATCTACCTGACCAACAGGTACATGAGCA...TGCTGGCCAGGGTGCAGCCTTGATGACACCTGCCGCTGCCCCTCGGGGCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp TACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCCCACGTCGGTGGGTaGCCTCTGGGCCAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: YTVSSGLISGSLLLVPASPHVGG*PLGQGS
Trigger: ACTGCCCTGGCCCAGAGGCCACCCACCGACGTGGGG...GGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp TACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCGGGCAGCCTTGCGGGTaGCCTCTGCCTGCCCCACGT +
Preference number: 4 (lower is better)
Translates to: YTVSSGLISGSLLLVPASGQPCG*PLPAPR
Trigger: ACGTGGGGCAGGCAGAGGCCACCCGCAAGGCTGCCC...GGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp GGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCGTCCAGGCAGCAGTTaGCATCTGAGAGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: GLISGSLLLVPASPGRQHRPGSS*HLRACW
Trigger: CCAGCAAGCTCTCAGATGCCAACTGCTGCCTGGACG...GTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp CCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGGGAGCCCCCGAGACCTaGCCCACAGCGCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: PKAPREYTVSSGLISGSLGAPET*PTAPTA
Trigger: TGCTGTGGGCGCTGTGGGCCAGGTCTCGGGGGCTCC...CAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp TCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCGGGCTCCTTGCTACTaGTTCCAGCTTCCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: SGLISGSLLLVPASPGRQRAPCY*FQLPLA
Trigger: TGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCG...CTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp TCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCTCCCGGCCAGTCCATGAGGGATaGAGGGCACAGGTTTCAGAC +
Preference number: 4 (lower is better)
Translates to: SRAPCYWFQLPLAGSTSRPVHEG*RAQVSD
Trigger: GTCTGAAACCTGTGCCCTCCATCCCTCATGGACTGG...CCGGGAGGTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp AAGTGTGAGGCCCCATCCCGGGGGTCTCTGACATTGGCCTTGCTCTGGCCTCAGGCAGTGGCTTCCTGCTaGGCTGGTATGGAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: KCEAPSRGSLTLALLWPQAVASC*AGMEGG
Trigger: CCCACCTTCCATACCAGCCCAGCAGGAAGCCACTGC...CTGAGGCCAGAGCAAGGCCAATGTCAGAGACCCCCGGGATGGGGCCTCACACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp TCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGTGGGGCATCCTGCAGTaGCTTCCTGCTGGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: SGLISGSLLLVPASPGRQWGILQ*LPAGLV
Trigger: TACCAGCCCAGCAGGAAGCCACTGCAGGATGCCCCA...CTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR TCA 90 bp TCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCTCCCGGTTGGAGAAGGAGCAATaGGCCCATGTCAGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: SRAPCYWFQLPLAGSTSRLEKEQ*AHVSPE
Trigger: TTCTGGGCTGACATGGGCTCATTGCTCCTTCTCCAA...CCGGGAGGTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR TCA 90 bp GGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACATGCGTCCACGCTTTTaGTGTCCTCAGAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GLISGSLLLVPASPGRQHMRPRF*CPQRAW
Trigger: CCAAGCCCTCTGAGGACATCAAAAGCGTGGACGCAT...GTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR TCA 90 bp CTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGTGTGCCGGGTGCTCCTaGAGCAGAAGCCGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LPTQGSKRIHSEFRADLGCAGCS*SRSRPP
Trigger: AGGAGGGCGGCTTCTGCTTCAGGAGCACCCGGCACA...CCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR TCA 90 bp AGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCAGGAACGCCATGGAGTTaGAATTGTGCCGGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: RADLGLLATGSSFPWQAAGTPWS*NCAGCS
Trigger: GGAGCACCCGGCACAATTTCAACTCCATGGCGTTCC...TGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR TCA 90 bp AAGTGTGAGGCCCCATCCCGGGGGTCTCTGACATTGGCCTTGCTCTGGCCTCAGGGAACGCCATGGAGTTaGAATTGTGCCGGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: KCEAPSRGSLTLALLWPQGTPWS*NCAGCS
Trigger: GGAGCACCCGGCACAATTTCAACTCCATGGCGTTCC...CTGAGGCCAGAGCAAGGCCAATGTCAGAGACCCCCGGGATGGGGCCTCACACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR TCA 90 bp CTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGGGGCTAGAGTCATCCTaGCTCGGCCACCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LPTQGSKRIHSEFRADLGGLESS*LGHPCS
Trigger: GCTGCAGGGGTGGCCGAGTCAGGATGACTCTAGCCC...CCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR TCA 90 bp TCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGGGAGGCACCCACATTTaGCTCCACACCTGCATCAGC +
Preference number: 4 (lower is better)
Translates to: SGLISGSLLLVPASPGRQGGTHI*LHTCIS
Trigger: GCTGATGCAGGTGTGGAGTCAAATGTGGGTGCCTCC...CTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR GCA 90 bp TGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGTGTATCAGCAGTGTGCCTaGCACCCCACACATGTGCTT +
Preference number: 4 (lower is better)
Translates to: CTLASRNPLWPGELVLGVYQQCA*HPTHVL
Trigger: AAGCACATGTGTGGGGTGGCAGGCACACTGCTGATA...CACCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319838.10
CDS-3UTR GCA 90 bp AGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGGTCTCCGTCCACTGCTaGATGCGGCAGCAGAACACC +
Preference number: 4 (lower is better)
Translates to: SSGLISGSLLLVPASPGRVSVHC*MRQQNT
Trigger: GGTGTTCTGCTGCCGCATGCAGCAGTGGACGGAGAC...CCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp GGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACGGTTGGTCATGTAGATaGGGGTCTCCGTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: GLISGSLLLVPASPGRQHGWSCR*GSPSTA
Trigger: AGCAGTGGACGGAGACCCGCATCTACATGACCAACC...GTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp CTGGGCCGTCCCTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGGTGTCTCGCAGGGAGTaGAGCACGAAGGGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: LGRPCPPKAPREYTVSSGVSRRE*STKGKV
Trigger: CACCTTGCCCTTCGTGCTGCACTCCCTGCGAGACAC...CCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAGGGACGGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp TCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGAGGTGTCATCAAGGCTaGACCCTGGCCAGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: SGLISGSLLLVPASPGRQRCHQG*TLASRN
Trigger: GTTCCTGCTGGCCAGGGTGCAGCCTTGATGACACCT...CTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp GCTGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGAGAGGGCGATTCTTTTaGTGCCCCACCTTGAGTAGA +
Preference number: 4 (lower is better)
Translates to: AAPWPAGTHSGQVSWFWGRGRFF*CPTLSR
Trigger: TCTACTCAAGGTGGGGCAGCAAAAGAATCGCCCTCT...CCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR GCA 90 bp CTGGGCCGTCCCTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCCCCGTGACTGCAGCTaGTGGGGACCATTAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LGRPCPPKAPREYTVSSGPRDCS*WGPLVL
Trigger: CAGCACTAATGGTCCCCAGCAGCTGCAGTCACGGGG...CCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAGGGACGGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR GCA 90 bp AAGTGTGAGGCCCCATCCCGGGGGTCTCTGACATTGGCCTTGCTCTGGCCTCAGCCTGCAGTGGCTTCCTaGTGGGCTGGTATGGAAGGT +
Preference number: 4 (lower is better)
Translates to: KCEAPSRGSLTLALLWPQPAVAS*WAGMEG
Trigger: ACCTTCCATACCAGCCCAGCAGGAAGCCACTGCAGG...CTGAGGCCAGAGCAAGGCCAATGTCAGAGACCCCCGGGATGGGGCCTCACACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR GCA 90 bp CTGGGCCGTCCCTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGTCTGGAGGTCCTGCCTaGATCAGCCTGAGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: LGRPCPPKAPREYTVSSGSGGPA*ISLRPH
Trigger: ATGGGGCCTCAGGCTGATGCAGGCAGGACCTCCAGA...CCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAGGGACGGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR GCA 90 bp GGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCACAGGTGTTGTAGGTaGCATTCATGGTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GLISGSLLLVPASPGRQHHRCCR*HSWSWG
Trigger: GCCCCAGGACCATGAATGGCACCTACAACACCTGTG...GTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp CTGGGCCGTCCCTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCGGGCTCTGCCAAACTaGGTCCTCTGCTCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: LGRPCPPKAPREYTVSSGRALPN*VLCSGS
Trigger: AGACCCTGAGCAGAGGACCCAGTTTGGCAGAGCCCG...CCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAGGGACGGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR CCA 90 bp TGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGTGTGCTCATGTACCTGTTaGTCAGGTAGATGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: CTLASRNPLWPGELVLGVCSCTC*SGRCPG
Trigger: CCCAGGGCATCTACCTGACCAACAGGTACATGAGCA...CACCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp AGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACGTCCAGGCAGCAGTTaGCATCTGAGAGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: RADLGLLATGSSFPWQAARPGSS*HLRACW
Trigger: CCAGCAAGCTCTCAGATGCCAACTGCTGCCTGGACG...TGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp TCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCGTCCAGGCAGCAGTTaGCATCTGAGAGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SGLISGSLLLVPASPGRQRPGSS*HLRACW
Trigger: CCAGCAAGCTCTCAGATGCCAACTGCTGCCTGGACG...CTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp TCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGATCAAGGCTGCACCCTaGCCAGCAGGAACCCACTCT +
Preference number: 4 (lower is better)
Translates to: SGLISGSLLLVPASPGRQIKAAP*PAGTHS
Trigger: AGAGTGGGTTCCTGCTGGCCAGGGTGCAGCCTTGAT...CTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp AAGTGTGAGGCCCCATCCCGGGGGTCTCTGACATTGGCCTTGCTCTGGCCTCAGGTGCTGCACGCCCAGTaGTCTCTCTCCTCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: KCEAPSRGSLTLALLWPQVLHAQ*SLSSLL
Trigger: AAGAAGGGAGGAGAGAGACCACTGGGCGTGCAGCAC...CTGAGGCCAGAGCAAGGCCAATGTCAGAGACCCCCGGGATGGGGCCTCACACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp TCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCGTGACTGCAGCTGCTaGGGACCATTAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SGLISGSLLLVPASPGRQRDCSC*GPLVLG
Trigger: TCCCAGCACTAATGGTCCCCAGCAGCTGCAGTCACG...CTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp CTGGGCCGTCCCTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCCAGAGCGCAAATCCTaGACAGGGAGCCCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: LGRPCPPKAPREYTVSSGPERKS*TGSPKG
Trigger: GCCCTTTGGGCTCCCTGTCCAGGATTTGCGCTCTGG...CCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAGGGACGGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR TCA 90 bp TTCCAGCCCCGAGGGGCAGCGGCAGGTGTCATCAAGGCTGCACCCTGGCCAGCACAAGATGGTGGAAAGTaGTGCGTCCACGCTTTTGAT +
Preference number: 4 (lower is better)
Translates to: FQPRGAAAGVIKAAPWPAQDGGK*CVHAFD
Trigger: ATCAAAAGCGTGGACGCATCACTTTCCACCATCTTG...TGCTGGCCAGGGTGCAGCCTTGATGACACCTGCCGCTGCCCCTCGGGGCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319838.10
CDS-3UTR TCA 90 bp GAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGGAACGCCATGGAGTTaGAATTGTGCCGGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: EFRADLGLLATGSSFPWQGTPWS*NCAGCS
Trigger: GGAGCACCCGGCACAATTTCAACTCCATGGCGTTCC...CTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR TCA 90 bp AAGTGTGAGGCCCCATCCCGGGGGTCTCTGACATTGGCCTTGCTCTGGCCTCAGCCCCACCTGAGTACTTaGATCCACCAGAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: KCEAPSRGSLTLALLWPQPHLST*IHQKSR
Trigger: CCTGGACTTCTGGTGGATTCAAGTACTCAGGTGGGG...CTGAGGCCAGAGCAAGGCCAATGTCAGAGACCCCCGGGATGGGGCCTCACACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR GCA 90 bp GAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGCTCCCTAATGGATCATaGATGCCATGGGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: EFRADLGLLATGSSFPWQLPNGS*MPWGQG
Trigger: CCCCTGCCCCCATGGCATGCATGATCCATTAGGGAG...CTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR GCA 90 bp CTGGGCCGTCCCTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGTCAGCAGCTCTTCACTaGCACGGTGTGGAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: LGRPCPPKAPREYTVSSGSAALH*HGVEWG
Trigger: TCCCCACTCCACACCGTGGCAGTGAAGAGCTGCTGA...CCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAGGGACGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
CDS-3UTR GCA 90 bp GCTGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGCACAGGTGTTGTAGGTaGCATTCATGGTCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: AAPWPAGTHSGQVSWFWGHRCCR*HSWSER
Trigger: TCTCTCTGACCATGAATGGCACCTACAACACCTGTG...CCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000430267.2
CDS-3UTR GCA 90 bp TCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGGGTTGGTCATGTAGATaGGGGTCTCCGTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: SGLISGSLLLVPASPGRQGWSCR*GSPSTA
Trigger: AGCAGTGGACGGAGACCCGCATCTACATGACCAACC...CTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp AGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCATGTTGGTCAGGTAGATaGCCTGGGAGAGCTGGCACA +
Preference number: 4 (lower is better)
Translates to: RADLGLLATGSSFPWQAACWSGR*PGRAGT
Trigger: TGTGCCAGCTCTCCCAGGGCATCTACCTGACCAACA...TGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp CCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGGGGAGCCACGGCCAGTaGAGACGCCTCCTGGAACTC +
Preference number: 4 (lower is better)
Translates to: PKAPREYTVSSGLISGSLGSHGQ*RRLLEL
Trigger: GAGTTCCAGGAGGCGTCTGCACTGGCCGTGGCTCCC...CAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp CTGGGCCGTCCCTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGTGGCCTCAGTCCTCTTaGCCTTGTCCCTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: LGRPCPPKAPREYTVSSGWPQSS*PCPCPS
Trigger: AGAGGGACAGGGACAAGGGCAAGAGGACTGAGGCCA...CCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAGGGACGGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp GCTGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGACACATACCCAGGGCTaGAACTTTCATACTAGCCTC +
Preference number: 4 (lower is better)
Translates to: AAPWPAGTHSGQVSWFWGTHTQG*NFHTSL
Trigger: GAGGCTAGTATGAAAGTTGCAGCCCTGGGTATGTGT...CCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR GCA 90 bp CTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCCCCCGAGTGCAAAGTaGTGCACGCCCAGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: LPTQGSKRIHSEFRADLGPPSAK*CTPSGL
Trigger: GAGACCACTGGGCGTGCAGCACTTTGCACTCGGGGG...CCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp GGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACTGCTCATGTACCTGTTaGTCAGGTAGATGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GLISGSLLLVPASPGRQHCSCTC*SGRCPG
Trigger: CCCAGGGCATCTACCTGACCAACAGGTACATGAGCA...GTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp CCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCCCACGTCGGTGGGTaGCCTCTGGGCCAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: PREYTVSSGLISGSLLLVPHVGG*PLGQGS
Trigger: ACTGCCCTGGCCCAGAGGCCACCCACCGACGTGGGG...AACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp CTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCGAACACCAGGAGGTTaGCCCAGACCATGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: LPTQGSKRIHSEFRADLGRTPGG*PRPCGQ
Trigger: CTGCCCGCATGGTCTGGGCCAACCTCCTGGTGTTCG...CCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp GGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACACGCACAGAGAGTCCTaGCTTTTGTGGGCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: GLISGSLLLVPASPGRQHTHRES*LLWALA
Trigger: TGCTAAGGCCCACAAAAGCCAGGACTCTCTGTGCGT...GTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp CCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTGGAGCCCCCGAGACCTaGCCCACAGCGCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: PREYTVSSGLISGSLLLVGAPET*PTAPTA
Trigger: TGCTGTGGGCGCTGTGGGCCAGGTCTCGGGGGCTCC...AACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp CCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGGGTTCCAGCTTCCCCTaGCAGGCAGCACCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: PKAPREYTVSSGLISGSLGSSFP*QAAPPG
Trigger: TCCGGGAGGTGCTGCCTGCCAGGGGAAGCTGGAACC...CAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp TCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGACATTGGCCTTGCTCTaGCCTCAGTCCTCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: SGLISGSLLLVPASPGRQTLALL*PQSSCP
Trigger: AGGGCAAGAGGACTGAGGCCAGAGCAAGGCCAATGT...CTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp AGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGGGCTTCCTGCTGGGCTaGTATGGAAGGTGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: SSGLISGSLLLVPASPGRGFLLG*YGRWEG
Trigger: TCCTTCCCACCTTCCATACCAGCCCAGCAGGAAGCC...CCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp AGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACATCATAAGGGGTGCTaGTGTCACACGCAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: RADLGLLATGSSFPWQAAHHKGC*CHTQAG
Trigger: ACCTGCCTGCGTGTGACACCAGCACCCCTTATGATG...TGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp AGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGTCCCAGTCCCACACCTaGGATCAGGGATTCACCCCT +
Preference number: 4 (lower is better)
Translates to: SSGLISGSLLLVPASPGRSQSHT*DQGFTP
Trigger: AGGGGTGAATCCCTGATCCCAGGTGTGGGACTGGGA...CCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR TCA 90 bp TCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGTTGGAGAAGGAGCAATaGGCCCATGTCAGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: SGLISGSLLLVPASPGRQLEKEQ*AHVSPE
Trigger: TTCTGGGCTGACATGGGCTCATTGCTCCTTCTCCAA...CTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR TCA 90 bp AGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGATGCGTCCACGCTTTTaGTGTCCTCAGAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SSGLISGSLLLVPASPGRMRPRF*CPQRAW
Trigger: CCAAGCCCTCTGAGGACATCAAAAGCGTGGACGCAT...CCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR TCA 90 bp AGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCAGCTCAGGGTCTTTCATaGGTCTGCAATCCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: RADLGLLATGSSFPWQAAAQGLS*VCNPGV
Trigger: GACACCTGGATTGCAGACTCATGAAAGACCCTGAGC...TGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR TCA 90 bp CCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGAGAGCGCCAGGCTGTTaGGCAGCAGGCCTAGCACCA +
Preference number: 4 (lower is better)
Translates to: PKAPREYTVSSGLISGSLRAPGC*AAGLAP
Trigger: TGGTGCTAGGCCTGCTGCTCAACAGCCTGGCGCTCT...CAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR TCA 90 bp GGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACGCAGCAGTTGGCATCTaGGAGCTTGCTGGTTATGTA +
Preference number: 4 (lower is better)
Translates to: GLISGSLLLVPASPGRQHAAVGI*ELAGYV
Trigger: TACATAACCAGCAAGCTCTCAGATGCCAACTGCTGC...GTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR TCA 90 bp CCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCATCCCGGGGGTCTCTaGCATTGGCCTTGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: PKAPREYTVSSGLISGSLHPGGL*HWPCSG
Trigger: GCCAGAGCAAGGCCAATGTCAGAGACCCCCGGGATG...CAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR TCA 90 bp CCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTAGCGCCCAAACCCCGTaGCTGCAGCTGCTGGGGACC +
Preference number: 4 (lower is better)
Translates to: PREYTVSSGLISGSLLLVSAQTP*LQLLGT
Trigger: GGTCCCCAGCAGCTGCAGTCACGGGGTTTGGGCGCT...AACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR TCA 90 bp CCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGACACGCAGGCAGGTGTaGGACGGAGCTGCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: PKAPREYTVSSGLISGSLTRRQV*DGAAGE
Trigger: CTCACCAGCAGCTCCGTCTCACACCTGCCTGCGTGT...CAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR GCA 90 bp AAGTGTGAGGCCCCATCCCGGGGGTCTCTGACATTGGCCTTGCTCTGGCCTCAGCTAATGGATCATGCATaGCATGGGGGCAGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: KCEAPSRGSLTLALLWPQLMDHA*HGGRGE
Trigger: TTCACCCCTGCCCCCATGGCATGCATGATCCATTAG...CTGAGGCCAGAGCAAGGCCAATGTCAGAGACCCCCGGGATGGGGCCTCACACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR GCA 90 bp CTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGGTCTCCGTCCACTGCTaGATGCGGCAGCAGAACACC +
Preference number: 4 (lower is better)
Translates to: LPTQGSKRIHSEFRADLGVSVHC*MRQQNT
Trigger: GGTGTTCTGCTGCCGCATGCAGCAGTGGACGGAGAC...CCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp TACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCGGGTCTCCGTCCACTaGTGCATGCGGCAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: YTVSSGLISGSLLLVPASRVSVH*CMRQQN
Trigger: GTTCTGCTGCCGCATGCAGCAGTGGACGGAGACCCG...GGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp CTGGGCCGTCCCTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGGGTTGGTCATGTAGATaGGGGTCTCCGTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: LGRPCPPKAPREYTVSSGGWSCR*GSPSTA
Trigger: AGCAGTGGACGGAGACCCGCATCTACATGACCAACC...CCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAGGGACGGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp GAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGTGTTGGTCAGGTAGATaGCCTGGGAGAGCTGGCACA +
Preference number: 4 (lower is better)
Translates to: EFRADLGLLATGSSFPWQCWSGR*PGRAGT
Trigger: TGTGCCAGCTCTCCCAGGGCATCTACCTGACCAACA...CTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp CTGGGCCGTCCCTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGAGGCTGGCCCAAGCCTaGAGGACTGTGAAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: LGRPCPPKAPREYTVSSGRLAQA*RTVKEK
Trigger: CTTCTCTTTCACAGTCCTCCAGGCTTGGGCCAGCCT...CCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAGGGACGGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR CCA 90 bp AGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCAAGGATGGAGGGACAGTaGGCAGCAAGATGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: RADLGLLATGSSFPWQAARMEGQ*AARWWK
Trigger: TTTCCACCATCTTGCTGCCCACTGTCCCTCCATCCT...TGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR CCA 90 bp TCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGTCCAGCTCCCCCAGGTaGCTGAATCTGGTGAAGTAT +
Preference number: 4 (lower is better)
Translates to: SGLISGSLLLVPASPGRQSSSPR*LNLVKY
Trigger: ATACTTCACCAGATTCAGCCACCTGGGGGAGCTGGA...CTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR CCA 90 bp AAGTGTGAGGCCCCATCCCGGGGGTCTCTGACATTGGCCTTGCTCTGGCCTCAGATCTCCCAGTTCCTGTaGGTCAGGAATTCGGGCTCT +
Preference number: 4 (lower is better)
Translates to: KCEAPSRGSLTLALLWPQISQFL*VRNSGS
Trigger: AGAGCCCGAATTCCTGACCCACAGGAACTGGGAGAT...CTGAGGCCAGAGCAAGGCCAATGTCAGAGACCCCCGGGATGGGGCCTCACACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR CCA 90 bp TCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGTGCTCATGTACCTGTTaGTCAGGTAGATGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SGLISGSLLLVPASPGRQCSCTC*SGRCPG
Trigger: CCCAGGGCATCTACCTGACCAACAGGTACATGAGCA...CTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp CCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTTCGGTGGGTGGCCTCTaGGCCAGGGCAGTCACCACC +
Preference number: 4 (lower is better)
Translates to: PREYTVSSGLISGSLLLVSVGGL*ARAVTT
Trigger: GGTGGTGACTGCCCTGGCCCAGAGGCCACCCACCGA...AACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp AAGTGTGAGGCCCCATCCCGGGGGTCTCTGACATTGGCCTTGCTCTGGCCTCAGCATCTGAGAGCTTGCTaGTTATGTACAGGGCGCGAC +
Preference number: 4 (lower is better)
Translates to: KCEAPSRGSLTLALLWPQHLRAC*LCTGRD
Trigger: GTCGCGCCCTGTACATAACCAGCAAGCTCTCAGATG...CTGAGGCCAGAGCAAGGCCAATGTCAGAGACCCCCGGGATGGGGCCTCACACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp AGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACATCTGAGAGCTTGCTaGTTATGTACAGGGCGCGAC +
Preference number: 4 (lower is better)
Translates to: RADLGLLATGSSFPWQAAHLRAC*LCTGRD
Trigger: GTCGCGCCCTGTACATAACCAGCAAGCTCTCAGATG...TGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp GGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCCTCCTGGAACTCCTTaGCCATGTAGTAGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: GLISGSLLLVPASPGRQHPPGTP*PCSSSR
Trigger: TCTGCTACTACTACATGGCCAAGGAGTTCCAGGAGG...GTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp AAGTGTGAGGCCCCATCCCGGGGGTCTCTGACATTGGCCTTGCTCTGGCCTCAGACGCACAGAGAGTCCTaGCTTTTGTGGGCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: KCEAPSRGSLTLALLWPQTHRES*LLWALA
Trigger: TGCTAAGGCCCACAAAAGCCAGGACTCTCTGTGCGT...CTGAGGCCAGAGCAAGGCCAATGTCAGAGACCCCCGGGATGGGGCCTCACACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp TACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCAAGAGAGCAGGTACCTaGGCCGTCCCTGCCCACCCA +
Preference number: 4 (lower is better)
Translates to: YTVSSGLISGSLLLVPASKRAGT*AVPAHP
Trigger: TGGGTGGGCAGGGACGGCCCAGGTACCTGCTCTCTT...GGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp AAGTGTGAGGCCCCATCCCGGGGGTCTCTGACATTGGCCTTGCTCTGGCCTCAGAGGACTGACTCTGGGTaGGGAGTTTTATTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: KCEAPSRGSLTLALLWPQRTDSG*GVLFQP
Trigger: GGGCTGGAATAAAACTCCCCACCCAGAGTCAGTCCT...CTGAGGCCAGAGCAAGGCCAATGTCAGAGACCCCCGGGATGGGGCCTCACACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000430267.2
CDS-3UTR CCA 90 bp TACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCAGAGGCACCTGAGCTaGGCAGGCACTGTGCGTTGG +
Preference number: 4 (lower is better)
Translates to: YTVSSGLISGSLLLVPASQRHLS*AGTVRW
Trigger: CCAACGCACAGTGCCTGCCCAGCTCAGGTGCCTCTG...GGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp AGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCAATCCCCAGAACCCACTaGAACCAATCGCTGGGATCT +
Preference number: 4 (lower is better)
Translates to: RADLGLLATGSSFPWQAAIPRTH*NQSLGS
Trigger: AGATCCCAGCGATTGGTTCCAGTGGGTTCTGGGGAT...TGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp CTGGGCCGTCCCTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGACCTGGGTTACTCAGTaGGTCCAGGAAGAACCCGGA +
Preference number: 4 (lower is better)
Translates to: LGRPCPPKAPREYTVSSGTWVTQ*VQEEPG
Trigger: TCCGGGTTCTTCCTGGACCCACTGAGTAACCCAGGT...CCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAGGGACGGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR TCA 90 bp AAGTGTGAGGCCCCATCCCGGGGGTCTCTGACATTGGCCTTGCTCTGGCCTCAGGCAGCAGTTGGCATCTaGGAGCTTGCTGGTTATGTA +
Preference number: 4 (lower is better)
Translates to: KCEAPSRGSLTLALLWPQAAVGI*ELAGYV
Trigger: TACATAACCAGCAAGCTCTCAGATGCCAACTGCTGC...CTGAGGCCAGAGCAAGGCCAATGTCAGAGACCCCCGGGATGGGGCCTCACACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR TCA 90 bp AGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCAGCAGCAGTTGGCATCTaGGAGCTTGCTGGTTATGTA +
Preference number: 4 (lower is better)
Translates to: RADLGLLATGSSFPWQAAAAVGI*ELAGYV
Trigger: TACATAACCAGCAAGCTCTCAGATGCCAACTGCTGC...TGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR TCA 90 bp TTCCAGCCCCGAGGGGCAGCGGCAGGTGTCATCAAGGCTGCACCCTGGCCAGCATGCTTGCTTTCTCTCTaGTTCATGAGCAACACTTCA +
Preference number: 4 (lower is better)
Translates to: FQPRGAAAGVIKAAPWPACLLSL*FMSNTS
Trigger: TGAAGTGTTGCTCATGAATCAGAGAGAAAGCAAGCA...TGCTGGCCAGGGTGCAGCCTTGATGACACCTGCCGCTGCCCCTCGGGGCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR GCA 90 bp AGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGTCTGCAGGAAGCTaGACAGGGCAAGAGACCTTT +
Preference number: 4 (lower is better)
Translates to: SSGLISGSLLLVPASPGRQSAGS*TGQETF
Trigger: AAAGGTCTCTTGCCCTGTGCAGCTTCCTGCAGACTG...CCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR GCA 90 bp GAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGCAGTCTGCAGGAAGCTaGACAGGGCAAGAGACCTTT +
Preference number: 4 (lower is better)
Translates to: EFRADLGLLATGSSFPWQQSAGS*TGQETF
Trigger: AAAGGTCTCTTGCCCTGTGCAGCTTCCTGCAGACTG...CTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR GCA 90 bp TACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCGGTGTCAGCCGGGGCTaGAGTCTCATCAGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: YTVSSGLISGSLLLVPASGVSRG*SLIRRL
Trigger: GAGCCTTCTGATGAGACTGCAGCCCCGGCTGACACC...GGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR GCA 90 bp CCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGGGTGTCAGCCGGGGCTaGAGTCTCATCAGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: PKAPREYTVSSGLISGSLGVSRG*SLIRRL
Trigger: GAGCCTTCTGATGAGACTGCAGCCCCGGCTGACACC...CAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR GCA 90 bp TCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCCAAACTGGGTCCTCTaGTCAGGGTCTTTCATGAGT +
Preference number: 4 (lower is better)
Translates to: SGLISGSLLLVPASPGRQPNWVL*SGSFMS
Trigger: ACTCATGAAAGACCCTGAGCAGAGGACCCAGTTTGG...CTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR GCA 90 bp CCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGGTCTCCGTCCACTGCTaGATGCGGCAGCAGAACACC +
Preference number: 4 (lower is better)
Translates to: PKAPREYTVSSGLISGSLVSVHC*MRQQNT
Trigger: GGTGTTCTGCTGCCGCATGCAGCAGTGGACGGAGAC...CAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp CCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGGTGTCTCGCAGGGAGTaGAGCACGAAGGGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: PKAPREYTVSSGLISGSLVSRRE*STKGKV
Trigger: CACCTTGCCCTTCGTGCTGCACTCCCTGCGAGACAC...CAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp CTGGGCCGTCCCTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGTGGCATCTGAGAGCTTaGTGGTTATGTACAGGGCGC +
Preference number: 4 (lower is better)
Translates to: LGRPCPPKAPREYTVSSGWHLRA*WLCTGR
Trigger: GCGCCCTGTACATAACCAGCAAGCTCTCAGATGCCA...CCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAGGGACGGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp CTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGTGGCCTCAGTCCTCTTaGCCTTGTCCCTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: LPTQGSKRIHSEFRADLGWPQSS*PCPCPS
Trigger: AGAGGGACAGGGACAAGGGCAAGAGGACTGAGGCCA...CCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp TACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCACCCGAGGGCTCGTGTaGCTAGACCCCTTCCCATTG +
Preference number: 4 (lower is better)
Translates to: YTVSSGLISGSLLLVPASTRGLV*LDPFPL
Trigger: CAATGGGAAGGGGTCTAGGCACACGAGCCCTCGGGT...GGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp TACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCAGTATCAGGACCGGGTaGGACACGGCTCCCACCAAG +
Preference number: 4 (lower is better)
Translates to: YTVSSGLISGSLLLVPASSIRTG*DTAPTK
Trigger: CTTGGTGGGAGCCGTGTCCCACCCGGTCCTGATACT...GGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR CCA 90 bp AGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGTGGGCAGCAAGATaGTGGAAAGTGATGCGTCCA +
Preference number: 4 (lower is better)
Translates to: SSGLISGSLLLVPASPGRQWAAR*WKVMRP
Trigger: TGGACGCATCACTTTCCACCATCTTGCTGCCCACTG...CCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR CCA 90 bp AGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGAGGATGGAGGGACAGTaGGCAGCAAGATGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: SSGLISGSLLLVPASPGRRMEGQ*AARWWK
Trigger: TTTCCACCATCTTGCTGCCCACTGTCCCTCCATCCT...CCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR CCA 90 bp AGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGTCCAGCTCCCCCAGGTaGCTGAATCTGGTGAAGTAT +
Preference number: 4 (lower is better)
Translates to: SSGLISGSLLLVPASPGRSSSPR*LNLVKY
Trigger: ATACTTCACCAGATTCAGCCACCTGGGGGAGCTGGA...CCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR CCA 90 bp AGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGATCTCCCAGTTCCTGTaGGTCAGGAATTCGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SSGLISGSLLLVPASPGRISQFL*VRNSGS
Trigger: AGAGCCCGAATTCCTGACCCACAGGAACTGGGAGAT...CCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR CCA 90 bp AAGTGTGAGGCCCCATCCCGGGGGTCTCTGACATTGGCCTTGCTCTGGCCTCAGTGTAGGTGCCATTCATaGTCAGAGAGACGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: KCEAPSRGSLTLALLWPQCRCHS*SERRKD
Trigger: GTCCTTGCGTCTCTCTGACCATGAATGGCACCTACA...CTGAGGCCAGAGCAAGGCCAATGTCAGAGACCCCCGGGATGGGGCCTCACACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
CDS-3UTR CCA 90 bp CCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTGCCCAGCTTGATCGCTaGGGGCCAGGTGAGGTCGCT +
Preference number: 4 (lower is better)
Translates to: PREYTVSSGLISGSLLLVAQLDR*GPGEVA
Trigger: AGCGACCTCACCTGGCCCCCAGCGATCAAGCTGGGC...AACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp TACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCGGCCACCGCCAGGTTaGTCATGTAGATGCGGGTCT +
Preference number: 4 (lower is better)
Translates to: YTVSSGLISGSLLLVPASRPPPG*SCRCGS
Trigger: AGACCCGCATCTACATGACCAACCTGGCGGTGGCCG...GGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp AAGTGTGAGGCCCCATCCCGGGGGTCTCTGACATTGGCCTTGCTCTGGCCTCAGCCTCCTGGAACTCCTTaGCCATGTAGTAGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: KCEAPSRGSLTLALLWPQPPGTP*PCSSSR
Trigger: TCTGCTACTACTACATGGCCAAGGAGTTCCAGGAGG...CTGAGGCCAGAGCAAGGCCAATGTCAGAGACCCCCGGGATGGGGCCTCACACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp TCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCCTCCTGGAACTCCTTaGCCATGTAGTAGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: SGLISGSLLLVPASPGRQPPGTP*PCSSSR
Trigger: TCTGCTACTACTACATGGCCAAGGAGTTCCAGGAGG...CTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp TACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCTCTGGCCAGGTGAGCTaGTTCTGGGGGTGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: YTVSSGLISGSLLLVPASSGQVS*FWGWQV
Trigger: CACTTGCCACCCCCAGAACCAGCTCACCTGGCCAGA...GGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp CCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGTCTGGCCAGGTGAGCTaGTTCTGGGGGTGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: PKAPREYTVSSGLISGSLSGQVS*FWGWQV
Trigger: CACTTGCCACCCCCAGAACCAGCTCACCTGGCCAGA...CAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp CTGGGCCGTCCCTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGATACTAGCCTCGGTGTaGCCCAGTATTTTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: LGRPCPPKAPREYTVSSGILASV*PSILWG
Trigger: CCCCCACAAAATACTGGGCCACACCGAGGCTAGTAT...CCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAGGGACGGCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp TCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGTTGAGGTCTAACCCCTaGACAGATCCTCTTCCCATC +
Preference number: 4 (lower is better)
Translates to: SGLISGSLLLVPASPGRQLRSNP*TDPLPI
Trigger: GATGGGAAGAGGATCTGTCCAGGGGTTAGACCTCAA...CTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR GCA 90 bp CCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTCCCTAATGGATCATaGATGCCATGGGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PKAPREYTVSSGLISGSLLPNGS*MPWGQG
Trigger: CCCCTGCCCCCATGGCATGCATGATCCATTAGGGAG...CAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR GCA 90 bp GAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGCCAAACTGGGTCCTCTaGTCAGGGTCTTTCATGAGT +
Preference number: 4 (lower is better)
Translates to: EFRADLGLLATGSSFPWQPNWVL*SGSFMS
Trigger: ACTCATGAAAGACCCTGAGCAGAGGACCCAGTTTGG...CTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR GCA 90 bp CCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGTCAGCAGCTCTTCACTaGCACGGTGTGGAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: PKAPREYTVSSGLISGSLSAALH*HGVEWG
Trigger: TCCCCACTCCACACCGTGGCAGTGAAGAGCTGCTGA...CAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
CDS-3UTR GCA 90 bp AGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGATGGAGTTGAAATTGTaGCGGGTGCTCCTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: SSGLISGSLLLVPASPGRMELKL*RVLLKQ
Trigger: CTGCTTCAGGAGCACCCGGCACAATTTCAACTCCAT...CCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp GAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGATGGAGTTGAAATTGTaGCGGGTGCTCCTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: EFRADLGLLATGSSFPWQMELKL*RVLLKQ
Trigger: CTGCTTCAGGAGCACCCGGCACAATTTCAACTCCAT...CTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp TACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCTGGCCTCAGTCCTCTTaGCCTTGTCCCTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: YTVSSGLISGSLLLVPASWPQSS*PCPCPS
Trigger: AGAGGGACAGGGACAAGGGCAAGAGGACTGAGGCCA...GGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp CCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGAGGTGTCATCAAGGCTaGACCCTGGCCAGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: PKAPREYTVSSGLISGSLRCHQG*TLASRN
Trigger: GTTCCTGCTGGCCAGGGTGCAGCCTTGATGACACCT...CAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp AGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGGGAGATCCCAGAACCTaGTCAGAATCTACACCTCAG +
Preference number: 4 (lower is better)
Translates to: SSGLISGSLLLVPASPGRGDPRT*SESTPQ
Trigger: CTGAGGTGTAGATTCTGAGCAGGTTCTGGGATCTCC...CCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR GCA 90 bp CCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGTCTGCCTCCTCCCTCTaGCCAGAGGAGCACAAAAGG +
Preference number: 4 (lower is better)
Translates to: PKAPREYTVSSGLISGSLSASSL*PEEHKR
Trigger: CCTTTTGTGCTCCTCTGGGCAGAGGGAGGAGGCAGA...CAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp CTGGGCCGTCCCTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGTGTAGGTGCCATTCATaGTCAGAGAGACGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: LGRPCPPKAPREYTVSSGCRCHS*SERRKD
Trigger: GTCCTTGCGTCTCTCTGACCATGAATGGCACCTACA...CCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAGGGACGGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
CDS-3UTR CCA 90 bp CCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCGAACACCAGGAGGTTaGCCCAGACCATGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: PREYTVSSGLISGSLLLVRTPGG*PRPCGQ
Trigger: CTGCCCGCATGGTCTGGGCCAACCTCCTGGTGTTCG...AACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp TACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCGAGTCCTGGCTTTTGTaGGCCTTAGCACTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: YTVSSGLISGSLLLVPASESWLL*ALALGA
Trigger: GGCTCCCAGTGCTAAGGCCCACAAAAGCCAGGACTC...GGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp CCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGGAGTCCTGGCTTTTGTaGGCCTTAGCACTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: PKAPREYTVSSGLISGSLESWLL*ALALGA
Trigger: GGCTCCCAGTGCTAAGGCCCACAAAAGCCAGGACTC...CAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp CCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTAAGAGAGCAGGTACCTaGGCCGTCCCTGCCCACCCA +
Preference number: 4 (lower is better)
Translates to: PREYTVSSGLISGSLLLVKRAGT*AVPAHP
Trigger: TGGGTGGGCAGGGACGGCCCAGGTACCTGCTCTCTT...AACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp CCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGATCAAGGCTGCACCCTaGCCAGCAGGAACCCACTCT +
Preference number: 4 (lower is better)
Translates to: PKAPREYTVSSGLISGSLIKAAP*PAGTHS
Trigger: AGAGTGGGTTCCTGCTGGCCAGGGTGCAGCCTTGAT...CAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp CCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTTGCCATTCATGGTCCTaGGGCAGCACAGGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: PREYTVSSGLISGSLLLVCHSWS*GSTGSR
Trigger: CCGGCTCCCTGTGCTGCCCCAGGACCATGAATGGCA...AACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR TCA 90 bp AGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGAGATCCCACCTCTGGTaGAGTACAGCAGATATTTGC +
Preference number: 4 (lower is better)
Translates to: SSGLISGSLLLVPASPGRRSHLW*STADIC
Trigger: GCAAATATCTGCTGTACTTCACCAGAGGTGGGATCT...CCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR TCA 90 bp CCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGACTCCAAGTCACCCTTaGGGTCTAACCCCTGGACAG +
Preference number: 4 (lower is better)
Translates to: PKAPREYTVSSGLISGSLTPSHP*GLTPGQ
Trigger: CTGTCCAGGGGTTAGACCTCAAGGGTGACTTGGAGT...CAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR GCA 90 bp CCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGTGTTGGTCAGGTAGATaGCCTGGGAGAGCTGGCACA +
Preference number: 4 (lower is better)
Translates to: PKAPREYTVSSGLISGSLCWSGR*PGRAGT
Trigger: TGTGCCAGCTCTCCCAGGGCATCTACCTGACCAACA...CAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp TACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCTGTCCTCAGAGGGCTTaGAGAAGGAGCAATGAGCCC +
Preference number: 4 (lower is better)
Translates to: YTVSSGLISGSLLLVPASCPQRA*RRSNEP
Trigger: GGGCTCATTGCTCCTTCTCCAAGCCCTCTGAGGACA...GGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR CCA 90 bp TACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCACATTGGCCTTGCTCTaGCCTCAGTCCTCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: YTVSSGLISGSLLLVPASTLALL*PQSSCP
Trigger: AGGGCAAGAGGACTGAGGCCAGAGCAAGGCCAATGT...GGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp TACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCGGCCACCCCTGCAGCTaGGCAAACTTGTTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: YTVSSGLISGSLLLVPASGHPCS*ANLFPH
Trigger: ATGAGGAAACAAGTTTGCCCAGCTGCAGGGGTGGCC...GGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp CCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCCAGTCCTGAGCTCTaGAGGTCCTGCCTGCATCAG +
Preference number: 4 (lower is better)
Translates to: PREYTVSSGLISGSLLLVPSPEL*RSCLHQ
Trigger: CTGATGCAGGCAGGACCTCCAGAGCTCAGGACTGGG...AACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR TCA 90 bp CCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGGCTCAGGGTCTTTCATaGGTCTGCAATCCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: PKAPREYTVSSGLISGSLAQGLS*VCNPGV
Trigger: GACACCTGGATTGCAGACTCATGAAAGACCCTGAGC...CAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR TCA 90 bp CCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTGGAACGCCATGGAGTTaGAATTGTGCCGGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: PREYTVSSGLISGSLLLVGTPWS*NCAGCS
Trigger: GGAGCACCCGGCACAATTTCAACTCCATGGCGTTCC...AACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR TCA 90 bp CTGGGCCGTCCCTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGTTTCTCTCTGATTCATaGGCAACACTTCACCCTCGT +
Preference number: 4 (lower is better)
Translates to: LGRPCPPKAPREYTVSSGFLSDS*ATLHPR
Trigger: ACGAGGGTGAAGTGTTGCTCATGAATCAGAGAGAAA...CCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAGGGACGGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR TCA 90 bp CTGGGCCGTCCCTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGACAGCAGATATTTGCTaGCTTCCAAGTTTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LGRPCPPKAPREYTVSSGTADIC*LPSFRS
Trigger: GCTCCTGAAACTTGGAAGTCAGCAAATATCTGCTGT...CCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAGGGACGGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR GCA 90 bp CCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTAATGGATCATGCATaGCATGGGGGCAGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: PKAPREYTVSSGLISGSLLMDHA*HGGRGE
Trigger: TTCACCCCTGCCCCCATGGCATGCATGATCCATTAG...CAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR GCA 90 bp CCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGTTTGCAAGTCCAGTCTaGAGGAAGCTGCACAGGGCA +
Preference number: 4 (lower is better)
Translates to: PKAPREYTVSSGLISGSLFASPV*RKLHRA
Trigger: TGCCCTGTGCAGCTTCCTGCAGACTGGACTTGCAAA...CAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR GCA 90 bp CTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGATGGAGTTGAAATTGTaGCGGGTGCTCCTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LPTQGSKRIHSEFRADLGMELKL*RVLLKQ
Trigger: CTGCTTCAGGAGCACCCGGCACAATTTCAACTCCAT...CCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp CCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGTGGCATCTGAGAGCTTaGTGGTTATGTACAGGGCGC +
Preference number: 4 (lower is better)
Translates to: PKAPREYTVSSGLISGSLWHLRA*WLCTGR
Trigger: GCGCCCTGTACATAACCAGCAAGCTCTCAGATGCCA...CAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp TACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCTGGCATCTGAGAGCTTaGTGGTTATGTACAGGGCGC +
Preference number: 4 (lower is better)
Translates to: YTVSSGLISGSLLLVPASWHLRA*WLCTGR
Trigger: GCGCCCTGTACATAACCAGCAAGCTCTCAGATGCCA...GGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp CCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTAGGTGTCATCAAGGCTaGACCCTGGCCAGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: PREYTVSSGLISGSLLLVRCHQG*TLASRN
Trigger: GTTCCTGCTGGCCAGGGTGCAGCCTTGATGACACCT...AACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp AGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAAAGAAAGCATGGGTaGCGTAAAGAACTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: SSGLISGSLLLVPASPGRQRKHG*RKELQV
Trigger: GACTTGGAGTTCTTTACGGCACCCATGCTTTCTTTG...CCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp CTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGTGTAGGTGCCATTCATaGTCAGAGAGACGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: LPTQGSKRIHSEFRADLGCRCHS*SERRKD
Trigger: GTCCTTGCGTCTCTCTGACCATGAATGGCACCTACA...CCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
CDS-3UTR CCA 90 bp TACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCATCTGAGAGCTTGCTaGTTATGTACAGGGCGCGAC +
Preference number: 4 (lower is better)
Translates to: YTVSSGLISGSLLLVPASHLRAC*LCTGRD
Trigger: GTCGCGCCCTGTACATAACCAGCAAGCTCTCAGATG...GGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp TACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCACGCACAGAGAGTCCTaGCTTTTGTGGGCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: YTVSSGLISGSLLLVPASTHRES*LLWALA
Trigger: TGCTAAGGCCCACAAAAGCCAGGACTCTCTGTGCGT...GGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp CCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGACGCACAGAGAGTCCTaGCTTTTGTGGGCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: PKAPREYTVSSGLISGSLTHRES*LLWALA
Trigger: TGCTAAGGCCCACAAAAGCCAGGACTCTCTGTGCGT...CAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp CCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTATCAAGGCTGCACCCTaGCCAGCAGGAACCCACTCT +
Preference number: 4 (lower is better)
Translates to: PREYTVSSGLISGSLLLVIKAAP*PAGTHS
Trigger: AGAGTGGGTTCCTGCTGGCCAGGGTGCAGCCTTGAT...AACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CCA 90 bp CCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGAGGACTGACTCTGGGTaGGGAGTTTTATTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: PKAPREYTVSSGLISGSLRTDSG*GVLFQP
Trigger: GGGCTGGAATAAAACTCCCCACCCAGAGTCAGTCCT...CAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000430267.2
CDS-3UTR CCA 90 bp CCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTGGCTGGTATGGAAGGTaGGAAGGACTCAGCCCACAG +
Preference number: 4 (lower is better)
Translates to: PREYTVSSGLISGSLLLVGWYGR*EGLSPQ
Trigger: CTGTGGGCTGAGTCCTTCCCACCTTCCATACCAGCC...AACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp CCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCTGCTGGGCTGGTATaGAAGGTGGGAAGGACTCAG +
Preference number: 4 (lower is better)
Translates to: PREYTVSSGLISGSLLLVPAGLV*KVGRTQ
Trigger: CTGAGTCCTTCCCACCTTCCATACCAGCCCAGCAGG...AACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp TACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCACTGGAACCAATCGCTaGGATCTTCCCTTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: YTVSSGLISGSLLLVPASTGTNR*DLPFLL
Trigger: CAACAGGAAGGGAAGATCCCAGCGATTGGTTCCAGT...GGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp CCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTATCTGCCTGCTGTCATaGGGCAGGAAAGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: PREYTVSSGLISGSLLLVICLLS*GRKGGR
Trigger: TCTGCCTCCTTTCCTGCCCCATGACAGCAGGCAGAT...AACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR GCA 90 bp CCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTTTTGCAAGTCCAGTCTaGAGGAAGCTGCACAGGGCA +
Preference number: 4 (lower is better)
Translates to: PREYTVSSGLISGSLLLVFASPV*RKLHRA
Trigger: TGCCCTGTGCAGCTTCCTGCAGACTGGACTTGCAAA...AACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR GCA 90 bp CCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCACAGGTGTTGTAGGTaGCATTCATGGTCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: PKAPREYTVSSGLISGSLHRCCR*HSWSER
Trigger: TCTCTCTGACCATGAATGGCACCTACAACACCTGTG...CAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
CDS-3UTR GCA 90 bp CCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTATGGAGTTGAAATTGTaGCGGGTGCTCCTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: PREYTVSSGLISGSLLLVMELKL*RVLLKQ
Trigger: CTGCTTCAGGAGCACCCGGCACAATTTCAACTCCAT...AACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR GCA 90 bp CCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGAGAAACGAAACATTCTaGCCCCTGGCTTCATTCTGT +
Preference number: 4 (lower is better)
Translates to: PKAPREYTVSSGLISGSLRNETF*PLASFC
Trigger: ACAGAATGAAGCCAGGGGGCAGAATGTTTCGTTTCT...CAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp CCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTAGTTTAAGAACAACCTaGGCATCACAGGGAGACCCC +
Preference number: 4 (lower is better)
Translates to: PREYTVSSGLISGSLLLVSLRTT*ASQGDP
Trigger: GGGGTCTCCCTGTGATGCCCAGGTTGTTCTTAAACT...AACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CCA 90 bp CCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTATCTTCCCTTCCTGTTaGGCCTATACTCCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: PREYTVSSGLISGSLLLVIFPSC*AYTPVA
Trigger: TGCCACAGGAGTATAGGCCCAACAGGAAGGGAAGAT...AACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR GCA 90 bp CCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCACAGGTGTTGTAGGTaGCATTCATGGTCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: PREYTVSSGLISGSLLLVHRCCR*HSWSER
Trigger: TCTCTCTGACCATGAATGGCACCTACAACACCTGTG...AACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
CDS GCA 90 bp GAGCCGATGACCAGCACCCAGAGGACCGCGCACACGGCCGCAGCCTaGCTGGGGGACCGCAGCCCGCGGGCACGCAGCGGGTGCCGCACG +
Preference number: 5 (lower is better)
Translates to: EPMTSTQRTAHTAAA*LGDRSPRARSGCRT
Trigger: CGTGCGGCACCCGCTGCGTGCCCGCGGGCTGCGGTCCCCCAGGCAGGCTGCGGCCGTGTGCGCGGTCCTCTGGGTGCTGGTCATCGGCTC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000407714.1
ENST00000430267.2
ENST00000438013.3
CDS GCA 90 bp AGGTTGGCCCAGACCATGCGGGCAGCCTTGCGGGTGGCCTCTGCCTaGCCCACGTCGGTGGGTGGCCTCTGGGCCAGGGCAGTCACCACC +
Preference number: 5 (lower is better)
Translates to: RLAQTMRAALRVASA*PTSVGGLWARAVTT
Trigger: GGTGGTGACTGCCCTGGCCCAGAGGCCACCCACCGACGTGGGGCAGGCAGAGGCCACCCGCAAGGCTGCCCGCATGGTCTGGGCCAACCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000407714.1
ENST00000430267.2
ENST00000438013.3
CDS GCA 90 bp CAGGAGGTTGGCCCAGACCATGCGGGCAGCCTTGCGGGTGGCCTCTaGCTGCCCCACGTCGGTGGGTGGCCTCTGGGCCAGGGCAGTCAC +
Preference number: 5 (lower is better)
Translates to: QEVGPDHAGSLAGGL*LPHVGGWPLGQGSH
Trigger: GTGACTGCCCTGGCCCAGAGGCCACCCACCGACGTGGGGCAGGCAGAGGCCACCCGCAAGGCTGCCCGCATGGTCTGGGCCAACCTCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000407714.1
ENST00000430267.2
ENST00000438013.3
CDS CCA 90 bp CGAACACCAGGAGGTTGGCCCAGACCATGCGGGCAGCCTTGCGGGTaGCCTCTGCCTGCCCCACGTCGGTGGGTGGCCTCTGGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: RTPGGWPRPCGQPCG*PLPAPRRWVASGPG
Trigger: CCCTGGCCCAGAGGCCACCCACCGACGTGGGGCAGGCAGAGGCCACCCGCAAGGCTGCCCGCATGGTCTGGGCCAACCTCCTGGTGTTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000407714.1
ENST00000430267.2
ENST00000438013.3
CDS CCA 90 bp TCAGCCCAAGGACGGGAAGACCAGGCTCCCGGACAAAGCCCAGGGTaGCCCCTCCACCCCTCCTGGCACCCGGCTGCAGGAGGCACCCAC +
Preference number: 5 (lower is better)
Translates to: SAQGREDQAPGQSPG*PLHPSWHPAAGGTH
Trigger: GTGGGTGCCTCCTGCAGCCGGGTGCCAGGAGGGGTGGAGGGGCCACCCTGGGCTTTGTCCGGGAGCCTGGTCTTCCCGTCCTTGGGCTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS GCA 90 bp AGACCACGAACACCAGGAGGTTGGCCCAGACCATGCGGGCAGCCTTaGGGGTGGCCTCTGCCTGCCCCACGTCGGTGGGTGGCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: RPRTPGGWPRPCGQP*GWPLPAPRRWVASG
Trigger: CCCAGAGGCCACCCACCGACGTGGGGCAGGCAGAGGCCACCCGCAAGGCTGCCCGCATGGTCTGGGCCAACCTCCTGGTGTTCGTGGTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000407714.1
ENST00000430267.2
ENST00000438013.3
CDS GCA 90 bp GGCGCGACGGATCGTCTCCAGGAGGGCACAGGCGTTCCAGCCCACTaGGAGGCGCACTGTCAGCCCCACGTGCAGGGGCAGGAAGCAGAC +
Preference number: 5 (lower is better)
Translates to: GATDRLQEGTGVPAH*EAHCQPHVQGQEAD
Trigger: GTCTGCTTCCTGCCCCTGCACGTGGGGCTGACAGTGCGCCTCGCAGTGGGCTGGAACGCCTGTGCCCTCCTGGAGACGATCCGTCGCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000407714.1
ENST00000430267.2
ENST00000438013.3
CDS CCA 90 bp GCCCCACGTGCAGGGGCAGGAAGCAGACCACGAACACCAGGAGGTTaGCCCAGACCATGCGGGCAGCCTTGCGGGTGGCCTCTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: APRAGAGSRPRTPGG*PRPCGQPCGWPLPA
Trigger: GGCAGGCAGAGGCCACCCGCAAGGCTGCCCGCATGGTCTGGGCCAACCTCCTGGTGTTCGTGGTCTGCTTCCTGCCCCTGCACGTGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000407714.1
ENST00000430267.2
ENST00000438013.3
CDS TCA 90 bp CCTCTCGCTGTCCCCAACACCCTCCGCGACATAGCCCAGGAAGGCTaGGACCAGCCCCGGCTGGACCTGGGCAGGGTCTGGTGTCCAGGA +
Preference number: 5 (lower is better)
Translates to: PLAVPNTLRDIAQEG*DQPRLDLGRVWCPG
Trigger: TCCTGGACACCAGACCCTGCCCAGGTCCAGCCGGGGCTGGTCTCAGCCTTCCTGGGCTATGTCGCGGAGGGTGTTGGGGACAGCGAGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS GCA 90 bp GCACAGGCGTTCCAGCCCACTGCGAGGCGCACTGTCAGCCCCACGTaGAGGGGCAGGAAGCAGACCACGAACACCAGGAGGTTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: AQAFQPTARRTVSPT*RGRKQTTNTRRLAQ
Trigger: CTGGGCCAACCTCCTGGTGTTCGTGGTCTGCTTCCTGCCCCTGCACGTGGGGCTGACAGTGCGCCTCGCAGTGGGCTGGAACGCCTGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000407714.1
ENST00000430267.2
ENST00000438013.3
CDS GCA 90 bp TGGGAGAGCTGGCACAGCGGCGTGTCTGAGGTGTCTCGCAGGGAGTaGAGCACGAAGGGCAAGGTGCACAGCAGGCAGAGGTCGGCCACC +
Preference number: 5 (lower is better)
Translates to: WESWHSGVSEVSRRE*STKGKVHSRQRSAT
Trigger: GGTGGCCGACCTCTGCCTGCTGTGCACCTTGCCCTTCGTGCTGCACTCCCTGCGAGACACCTCAGACACGCCGCTGTGCCAGCTCTCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000407714.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CAA 90 bp TCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGACCATGCGGGCAGCCTaGCGGGTGGCCTCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: SGLISGSLLLVPASPGRQTMRAA*RVASAC
Trigger: GCAGGCAGAGGCCACCCGCAAGGCTGCCCGCATGGT...CTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CAA 90 bp AAGTGTGAGGCCCCATCCCGGGGGTCTCTGACATTGGCCTTGCTCTGGCCTCAGACCATGCGGGCAGCCTaGCGGGTGGCCTCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: KCEAPSRGSLTLALLWPQTMRAA*RVASAC
Trigger: GCAGGCAGAGGCCACCCGCAAGGCTGCCCGCATGGT...CTGAGGCCAGAGCAAGGCCAATGTCAGAGACCCCCGGGATGGGGCCTCACACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CAA 90 bp GGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACAGTCCAGGGCCAGCCTaGGGCGGTGTGCAGACCTGG +
Preference number: 5 (lower is better)
Translates to: GLISGSLLLVPASPGRQHSPGPA*GGVQTW
Trigger: CCAGGTCTGCACACCGCCCAAGGCTGGCCCTGGACT...GTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS TCA 90 bp GGGTGCTGGTGTCACACGCAGGCAGGTGTGAGACGGAGCTGCTGGTaGGCGCCCAGAGTCCAGGACTCACAGCCACACGTCCCACCACCT +
Preference number: 5 (lower is better)
Translates to: GCWCHTQAGVRRSCW*APRVQDSQPHVPPP
Trigger: AGGTGGTGGGACGTGTGGCTGTGAGTCCTGGACTCTGGGCGCTCACCAGCAGCTCCGTCTCACACCTGCCTGCGTGTGACACCAGCACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS CCA 90 bp GTGAGCGCCCAGAGTCCAGGACTCACAGCCACACGTCCCACCACCTaGGTTACTCAGTGGGTCCAGGAAGAACCCGGAGGGGTGAGGGCG +
Preference number: 5 (lower is better)
Translates to: VSAQSPGLTATRPTT*VTQWVQEEPGGVRA
Trigger: CGCCCTCACCCCTCCGGGTTCTTCCTGGACCCACTGAGTAACCCAGGTGGTGGGACGTGTGGCTGTGAGTCCTGGACTCTGGGCGCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CAA 90 bp GCTGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGGCGTCCAGGCAGCAGTaGGCATCTGAGAGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: AAPWPAGTHSGQVSWFWGASRQQ*ASESLL
Trigger: CAGCAAGCTCTCAGATGCCAACTGCTGCCTGGACGC...CCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCAGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CAA 90 bp AGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGGGCAGGCACTGTGCGTaGGGGAGGGCTCCGTGCGAC +
Preference number: 5 (lower is better)
Translates to: SSGLISGSLLLVPASPGRGRHCA*GRAPCD
Trigger: GTCGCACGGAGCCCTCCCCAACGCACAGTGCCTGCC...CCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS GCA 90 bp CGATTCTTTTGCTGCCCCACCTTGAGTAGAGGCAGCCTGGGACCCTaGCTCGTGGGAGGTGAGGACCCGAGGGCTCGTGTGCCTAGACCC +
Preference number: 5 (lower is better)
Translates to: RFFCCPTLSRGSLGP*LVGGEDPRARVPRP
Trigger: GGGTCTAGGCACACGAGCCCTCGGGTCCTCACCTCCCACGAGGCAGGGTCCCAGGCTGCCTCTACTCAAGGTGGGGCAGCAAAAGAATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS CCA 90 bp GAATCTACACCTCAGAGGCACCTGAGCTGGGCAGGCACTGTGCGTTaGGGAGGGCTCCGTGCGACTGGCCTCCTACTCTCCCCACCTGAG +
Preference number: 5 (lower is better)
Translates to: ESTPQRHLSWAGTVR*GGLRATGLLLSPPE
Trigger: CTCAGGTGGGGAGAGTAGGAGGCCAGTCGCACGGAGCCCTCCCCAACGCACAGTGCCTGCCCAGCTCAGGTGCCTCTGAGGTGTAGATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS CCA 90 bp GGTGAGGGCGGGAGAAGCCTCTCCCCCAACCATCAGGCTGTCCTCTaGGGCATCCTGCAGTGGCTTCCTGCTGGGCTGGTATGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: GEGGRSLSPNHQAVL*GILQWLPAGLVWKV
Trigger: CACCTTCCATACCAGCCCAGCAGGAAGCCACTGCAGGATGCCCCAGAGGACAGCCTGATGGTTGGGGGAGAGGCTTCTCCCGCCCTCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CAA 90 bp GCTGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGGGGAACGCCATGGAGTaGAAATTGTGCCGGGTGCTC +
Preference number: 5 (lower is better)
Translates to: AAPWPAGTHSGQVSWFWGGNAME*KLCRVL
Trigger: GAGCACCCGGCACAATTTCAACTCCATGGCGTTCCC...CCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCAGC
64% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CAA 90 bp TCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCTCCCGGGCGTCCAGGCAGCAGTaGGCATCTGAGAGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: SRAPCYWFQLPLAGSTSRASRQQ*ASESLL
Trigger: CAGCAAGCTCTCAGATGCCAACTGCTGCCTGGACGC...CCGGGAGGTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS TCA 90 bp CAGAAGCTCTGCTGCCCCCAAGGCTGGCCCAAGCCTGGAGGACTGTaGAAGAGAAGACGGCAGTATCAGGACCGGGTGGGACACGGCTCC +
Preference number: 5 (lower is better)
Translates to: QKLCCPQGWPKPGGL*KRRRQYQDRVGHGS
Trigger: GGAGCCGTGTCCCACCCGGTCCTGATACTGCCGTCTTCTCTTTCACAGTCCTCCAGGCTTGGGCCAGCCTTGGGGGCAGCAGAGCTTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS TCA 90 bp GTTGGTCAGGTAGATGCCCTGGGAGAGCTGGCACAGCGGCGTGTCTaGGGTGTCTCGCAGGGAGTGCAGCACGAAGGGCAAGGTGCACAG +
Preference number: 5 (lower is better)
Translates to: VGQVDALGELAQRRV*GVSQGVQHEGQGAQ
Trigger: CTGTGCACCTTGCCCTTCGTGCTGCACTCCCTGCGAGACACCTCAGACACGCCGCTGTGCCAGCTCTCCCAGGGCATCTACCTGACCAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000407714.1
ENST00000430267.2
ENST00000438013.3
CDS TCA 90 bp GAGGGCTCCGTGCGACTGGCCTCCTACTCTCCCCACCTGAGTACTTaGATCCACCAGAAGTCCAGGGCCAGCCTTGGGCGGTGTGCAGAC +
Preference number: 5 (lower is better)
Translates to: EGSVRLASYSPHLST*IHQKSRASLGRCAD
Trigger: GTCTGCACACCGCCCAAGGCTGGCCCTGGACTTCTGGTGGATTCAAGTACTCAGGTGGGGAGAGTAGGAGGCCAGTCGCACGGAGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS GCA 90 bp TACTCCTGTGGCAGCCCCCGCTGGGGGCCAGGAGATCCCAGAACCTaGTCAGAATCTACACCTCAGAGGCACCTGAGCTGGGCAGGCACT +
Preference number: 5 (lower is better)
Translates to: YSCGSPRWGPGDPRT*SESTPQRHLSWAGT
Trigger: AGTGCCTGCCCAGCTCAGGTGCCTCTGAGGTGTAGATTCTGAGCAGGTTCTGGGATCTCCTGGCCCCCAGCGGGGGCTGCCACAGGAGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS CCA 90 bp GATCCCAGAACCTGCTCAGAATCTACACCTCAGAGGCACCTGAGCTaGGCAGGCACTGTGCGTTGGGGAGGGCTCCGTGCGACTGGCCTC +
Preference number: 5 (lower is better)
Translates to: DPRTCSESTPQRHLS*AGTVRWGGLRATGL
Trigger: GAGGCCAGTCGCACGGAGCCCTCCCCAACGCACAGTGCCTGCCCAGCTCAGGTGCCTCTGAGGTGTAGATTCTGAGCAGGTTCTGGGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS CCA 90 bp TCTGGGGCATCCTGCAGTGGCTTCCTGCTGGGCTGGTATGGAAGGTaGGAAGGACTCAGCCCACAGCGAAGGGCCTTCCTCCTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: SGASCSGFLLGWYGR*EGLSPQRRAFLLPL
Trigger: CAGAGGGAGGAGGAAGGCCCTTCGCTGTGGGCTGAGTCCTTCCCACCTTCCATACCAGCCCAGCAGGAAGCCACTGCAGGATGCCCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CAA 90 bp AGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCAACGAACACCAGGAGGTaGGCCCAGACCATGCGGGCA +
Preference number: 5 (lower is better)
Translates to: RADLGLLATGSSFPWQAATNTRR*AQTMRA
Trigger: TGCCCGCATGGTCTGGGCCAACCTCCTGGTGTTCGT...TGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CAA 90 bp GGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACGCGTCCAGGCAGCAGTaGGCATCTGAGAGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: GLISGSLLLVPASPGRQHASRQQ*ASESLL
Trigger: CAGCAAGCTCTCAGATGCCAACTGCTGCCTGGACGC...GTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CAA 90 bp TCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCGGGGGTCTCTGACATaGGCCTTGCTCTGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: SGLISGSLLLVPASPGRQRGSLT*ALLWPQ
Trigger: CTGAGGCCAGAGCAAGGCCAATGTCAGAGACCCCCG...CTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS TCA 90 bp CAGGAGATCCCAGAACCTGCTCAGAATCTACACCTCAGAGGCACCTaGGCTGGGCAGGCACTGTGCGTTGGGGAGGGCTCCGTGCGACTG +
Preference number: 5 (lower is better)
Translates to: QEIPEPAQNLHLRGT*AGQALCVGEGSVRL
Trigger: CAGTCGCACGGAGCCCTCCCCAACGCACAGTGCCTGCCCAGCTCAGGTGCCTCTGAGGTGTAGATTCTGAGCAGGTTCTGGGATCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS TCA 90 bp CTTCAGGCCCAGTCGTGCTGCTCAGGGGCCGCCCAGGGGTGGAGCTaGGTATCCTCCTCTCCGTCACTATCAGGACCACCCACAAAGTCA +
Preference number: 5 (lower is better)
Translates to: LQAQSCCSGAAQGWS*VSSSPSLSGPPTKS
Trigger: TGACTTTGTGGGTGGTCCTGATAGTGACGGAGAGGAGGATACTCAGCTCCACCCCTGGGCGGCCCCTGAGCAGCACGACTGGGCCTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS GCA 90 bp CCCCAACCATCAGGCTGTCCTCTGGGGCATCCTGCAGTGGCTTCCTaGTGGGCTGGTATGGAAGGTGGGAAGGACTCAGCCCACAGCGAA +
Preference number: 5 (lower is better)
Translates to: PQPSGCPLGHPAVAS*WAGMEGGKDSAHSE
Trigger: TTCGCTGTGGGCTGAGTCCTTCCCACCTTCCATACCAGCCCAGCAGGAAGCCACTGCAGGATGCCCCAGAGGACAGCCTGATGGTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS CCA 90 bp GGCCAGGCTCCGAGGACATCCCCAGAACCCACTGGAACCAATCGCTaGGATCTTCCCTTCCTGTTGGGCCTATACTCCTGTGGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: GQAPRTSPEPTGTNR*DLPFLLGLYSCGSP
Trigger: GGGGCTGCCACAGGAGTATAGGCCCAACAGGAAGGGAAGATCCCAGCGATTGGTTCCAGTGGGTTCTGGGGATGTCCTCGGAGCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS CCA 90 bp CAACCATCAGGCTGTCCTCTGGGGCATCCTGCAGTGGCTTCCTGCTaGGCTGGTATGGAAGGTGGGAAGGACTCAGCCCACAGCGAAGGG +
Preference number: 5 (lower is better)
Translates to: QPSGCPLGHPAVASC*AGMEGGKDSAHSEG
Trigger: CCCTTCGCTGTGGGCTGAGTCCTTCCCACCTTCCATACCAGCCCAGCAGGAAGCCACTGCAGGATGCCCCAGAGGACAGCCTGATGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CAA 90 bp TGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGTGGATGCGTCCACGCTTTaGATGTCCTCAGAGGGCTTG +
Preference number: 5 (lower is better)
Translates to: CTLASRNPLWPGELVLGVDASTL*MSSEGL
Trigger: CAAGCCCTCTGAGGACATCAAAAGCGTGGACGCATC...CACCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319838.10
CDS-3UTR CAA 90 bp TCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCTCCCGGGCCATGGAGTTGAAATaGTGCCGGGTGCTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: SRAPCYWFQLPLAGSTSRAMELK*CRVLLK
Trigger: CTTCAGGAGCACCCGGCACAATTTCAACTCCATGGC...CCGGGAGGTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CAA 90 bp CTGGGCCGTCCCTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGACGAACACCAGGAGGTaGGCCCAGACCATGCGGGCA +
Preference number: 5 (lower is better)
Translates to: LGRPCPPKAPREYTVSSGTNTRR*AQTMRA
Trigger: TGCCCGCATGGTCTGGGCCAACCTCCTGGTGTTCGT...CCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAGGGACGGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CAA 90 bp GGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCTGATCTCGGGCTCCTaGCTACTGGTTCCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: GLISGSLLLVPASPGRQHLISGS*LLVPAS
Trigger: GGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAG...GTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CAA 90 bp TCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACCTCCCGGTCAGTCCTCTTGCCCTaGTCCCTGTCCCTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: SRAPCYWFQLPLAGSTSRSVLLP*SLSLSL
Trigger: AAGAGAGAGGGACAGGGACAAGGGCAAGAGGACTGA...CCGGGAGGTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CAA 90 bp GAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGCGGGGGTCTCTGACATaGGCCTTGCTCTGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: EFRADLGLLATGSSFPWQRGSLT*ALLWPQ
Trigger: CTGAGGCCAGAGCAAGGCCAATGTCAGAGACCCCCG...CTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CAA 90 bp CTGGGCCGTCCCTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCGGGGGTCTCTGACATaGGCCTTGCTCTGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: LGRPCPPKAPREYTVSSGRGSLT*ALLWPQ
Trigger: CTGAGGCCAGAGCAAGGCCAATGTCAGAGACCCCCG...CCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAGGGACGGCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CAA 90 bp GCTGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGTCCCCACCTGAGTACTaGAATCCACCAGAAGTCCAG +
Preference number: 5 (lower is better)
Translates to: AAPWPAGTHSGQVSWFWGSPPEY*NPPEVQ
Trigger: CTGGACTTCTGGTGGATTCAAGTACTCAGGTGGGGA...CCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CAA 90 bp TGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGTGAGGAGGCACCCACATTaGACTCCACACCTGCATCAG +
Preference number: 5 (lower is better)
Translates to: CTLASRNPLWPGELVLGVRRHPH*TPHLHQ
Trigger: CTGATGCAGGTGTGGAGTCAAATGTGGGTGCCTCCT...CACCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CAA 90 bp GAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCGTCCAGGCAGCAGTaGGCATCTGAGAGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: EFRADLGLLATGSSFPWQASRQQ*ASESLL
Trigger: CAGCAAGCTCTCAGATGCCAACTGCTGCCTGGACGC...CTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CAA 90 bp TCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCTGATCTCGGGCTCCTaGCTACTGGTTCCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: SGLISGSLLLVPASPGRQLISGS*LLVPAS
Trigger: GGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAG...CTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CAA 90 bp GGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGCACTCAGTCCTCTTGCCCTaGTCCCTGTCCCTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: GLISGSLLLVPASPGRQHSVLLP*SLSLSL
Trigger: AAGAGAGAGGGACAGGGACAAGGGCAAGAGGACTGA...GTGCTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS TCA 90 bp ATGAGCAACACTTCACCCTCGTTCCAGGGACTTTTGGAGGGACCCTaGGCCAGGCCAGGCTCCGAGGACATCCCCAGAACCCACTGGAAC +
Preference number: 5 (lower is better)
Translates to: MSNTSPSFQGLLEGP*ARPGSEDIPRTHWN
Trigger: GTTCCAGTGGGTTCTGGGGATGTCCTCGGAGCCTGGCCTGGCTCAGGGTCCCTCCAAAAGTCCCTGGAACGAGGGTGAAGTGTTGCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS TCA 90 bp GACCTGGGCAGGGTCTGGTGTCCAGGACACGGGCTAGAGTCATCCTaGCTCGGCCACCCCTGCAGCTGGGCAAACTTGTTTCCTCATCAT +
Preference number: 5 (lower is better)
Translates to: DLGRVWCPGHGLESS*LGHPCSWANLFPHH
Trigger: ATGATGAGGAAACAAGTTTGCCCAGCTGCAGGGGTGGCCGAGTCAGGATGACTCTAGCCCGTGTCCTGGACACCAGACCCTGCCCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS CCA 90 bp AGCCTGGAGGACTGTGAAAGAGAAGACGGCAGTATCAGGACCGGGTaGGACACGGCTCCCACCAAGGAGTCACCAACTGCTGTGCCTGGA +
Preference number: 5 (lower is better)
Translates to: SLEDCEREDGSIRTG*DTAPTKESPTAVPG
Trigger: TCCAGGCACAGCAGTTGGTGACTCCTTGGTGGGAGCCGTGTCCCACCCGGTCCTGATACTGCCGTCTTCTCTTTCACAGTCCTCCAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS CCA 90 bp AGTAGCAGATGGCGTCCAGGCAGCAGTTGGCATCTGAGAGCTTGCTaGTTATGTACAGGGCGCGACGGATCGTCTCCAGGAGGGCACAGG +
Preference number: 5 (lower is better)
Translates to: SSRWRPGSSWHLRAC*LCTGRDGSSPGGHR
Trigger: CCTGTGCCCTCCTGGAGACGATCCGTCGCGCCCTGTACATAACCAGCAAGCTCTCAGATGCCAACTGCTGCCTGGACGCCATCTGCTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000407714.1
ENST00000430267.2
ENST00000438013.3
CDS CCA 90 bp GATCTTCCCTTCCTGTTGGGCCTATACTCCTGTGGCAGCCCCCGCTaGGGGCCAGGAGATCCCAGAACCTGCTCAGAATCTACACCTCAG +
Preference number: 5 (lower is better)
Translates to: DLPFLLGLYSCGSPR*GPGDPRTCSESTPQ
Trigger: CTGAGGTGTAGATTCTGAGCAGGTTCTGGGATCTCCTGGCCCCCAGCGGGGGCTGCCACAGGAGTATAGGCCCAACAGGAAGGGAAGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CAA 90 bp AAGTGTGAGGCCCCATCCCGGGGGTCTCTGACATTGGCCTTGCTCTGGCCTCAGGATGCGTCCACGCTTTaGATGTCCTCAGAGGGCTTG +
Preference number: 5 (lower is better)
Translates to: KCEAPSRGSLTLALLWPQDASTL*MSSEGL
Trigger: CAAGCCCTCTGAGGACATCAAAAGCGTGGACGCATC...CTGAGGCCAGAGCAAGGCCAATGTCAGAGACCCCCGGGATGGGGCCTCACACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR CAA 90 bp TCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGCAGGCCATGGAGTTGAAATaGTGCCGGGTGCTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: SGLISGSLLLVPASPGRQAMELK*CRVLLK
Trigger: CTTCAGGAGCACCCGGCACAATTTCAACTCCATGGC...CTGCCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CAA 90 bp CTGGGCCGTCCCTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGGGGAACGCCATGGAGTaGAAATTGTGCCGGGTGCTC +
Preference number: 5 (lower is better)
Translates to: LGRPCPPKAPREYTVSSGGNAME*KLCRVL
Trigger: GAGCACCCGGCACAATTTCAACTCCATGGCGTTCCC...CCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAGGGACGGCCCAG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CAA 90 bp GAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGGGAACGCCATGGAGTaGAAATTGTGCCGGGTGCTC +
Preference number: 5 (lower is better)
Translates to: EFRADLGLLATGSSFPWQGNAME*KLCRVL
Trigger: GAGCACCCGGCACAATTTCAACTCCATGGCGTTCCC...CTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CAA 90 bp CCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTACCATGCGGGCAGCCTaGCGGGTGGCCTCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: PREYTVSSGLISGSLLLVTMRAA*RVASAC
Trigger: GCAGGCAGAGGCCACCCGCAAGGCTGCCCGCATGGT...AACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CAA 90 bp GAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGCTGATCTCGGGCTCCTaGCTACTGGTTCCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: EFRADLGLLATGSSFPWQLISGS*LLVPAS
Trigger: GGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAG...CTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS GCA 90 bp GCTGACTTCCAAGTTTCAGGAGCCCTTCCCCCGAGTGCAAAGTGCTaGACGCCCAGTGGTCTCTCTCCTCCCTTCTTGAGGGTCCTGCTT +
Preference number: 5 (lower is better)
Translates to: ADFQVSGALPPSAKC*TPSGLSPPFLRVLL
Trigger: AAGCAGGACCCTCAAGAAGGGAGGAGAGAGACCACTGGGCGTGCAGCACTTTGCACTCGGGGGAAGGGCTCCTGAAACTTGGAAGTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS GCA 90 bp GGACAGATCCTCTTCCCATCTCCTGAGCTCTTCTCTCCTGGGATCTaGCTGCTGTCATGGGGCAGGAAAGGAGGCAGAAGGAGCTCCACG +
Preference number: 5 (lower is better)
Translates to: GQILFPSPELFSPGI*LLSWGRKGGRRSST
Trigger: CGTGGAGCTCCTTCTGCCTCCTTTCCTGCCCCATGACAGCAGGCAGATCCCAGGAGAGAAGAGCTCAGGAGATGGGAAGAGGATCTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS CCA 90 bp TATGAAGCATGTACTTCAGCAGCTCTTCACTGCCACGGTGTGGAGTaGGGACAGCCCGGGAACCACTCAGCATCTCTCCCAAGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: YEACTSAALHCHGVE*GQPGNHSASLPRAQ
Trigger: CTGGGCCCTTGGGAGAGATGCTGAGTGGTTCCCGGGCTGTCCCCACTCCACACCGTGGCAGTGAAGAGCTGCTGAAGTACATGCTTCATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS CCA 90 bp TTCCCATCTCCTGAGCTCTTCTCTCCTGGGATCTGCCTGCTGTCATaGGGCAGGAAAGGAGGCAGAAGGAGCTCCACGTTCCCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: FPSPELFSPGICLLS*GRKGGRRSSTFPSS
Trigger: ACTGGAGGGGAACGTGGAGCTCCTTCTGCCTCCTTTCCTGCCCCATGACAGCAGGCAGATCCCAGGAGAGAAGAGCTCAGGAGATGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CAA 90 bp TACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCACGAACACCAGGAGGTaGGCCCAGACCATGCGGGCA +
Preference number: 5 (lower is better)
Translates to: YTVSSGLISGSLLLVPASTNTRR*AQTMRA
Trigger: TGCCCGCATGGTCTGGGCCAACCTCCTGGTGTTCGT...GGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CAA 90 bp AAGTGTGAGGCCCCATCCCGGGGGTCTCTGACATTGGCCTTGCTCTGGCCTCAGTTGGCATCTGAGAGCTaGCTGGTTATGTACAGGGCG +
Preference number: 5 (lower is better)
Translates to: KCEAPSRGSLTLALLWPQLASES*LVMYRA
Trigger: CGCCCTGTACATAACCAGCAAGCTCTCAGATGCCAA...CTGAGGCCAGAGCAAGGCCAATGTCAGAGACCCCCGGGATGGGGCCTCACACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CAA 90 bp GAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGAGAGAGTCCTGGCTTTaGTGGGCCTTAGCACTGGGA +
Preference number: 5 (lower is better)
Translates to: EFRADLGLLATGSSFPWQRESWL*WALALG
Trigger: TCCCAGTGCTAAGGCCCACAAAAGCCAGGACTCTCT...CTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CAA 90 bp CTGGGCCGTCCCTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGAGAGAGTCCTGGCTTTaGTGGGCCTTAGCACTGGGA +
Preference number: 5 (lower is better)
Translates to: LGRPCPPKAPREYTVSSGRESWL*WALALG
Trigger: TCCCAGTGCTAAGGCCCACAAAAGCCAGGACTCTCT...CCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAGGGACGGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CAA 90 bp AGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCCAGCTTCCCCTGGCAGGTCAGTCCTCTTGCCCTaGTCCCTGTCCCTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: SSGLISGSLLLVPASPGRSVLLP*SLSLSL
Trigger: AAGAGAGAGGGACAGGGACAAGGGCAAGAGGACTGA...CCTGCCAGGGGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS GCA 90 bp AGAGTCCTGGCTTTTGTGGGCCTTAGCACTGGGAGCCACGGCCAGTaGAGACGCCTCCTGGAACTCCTTGGCCATGTAGTAGTAGCAGAT +
Preference number: 5 (lower is better)
Translates to: RVLAFVGLSTGSHGQ*RRLLELLGHVVVAD
Trigger: ATCTGCTACTACTACATGGCCAAGGAGTTCCAGGAGGCGTCTGCACTGGCCGTGGCTCCCAGTGCTAAGGCCCACAAAAGCCAGGACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000407714.1
ENST00000430267.2
ENST00000438013.3
CDS CCA 90 bp AGGACTATGAAGCATGTACTTCAGCAGCTCTTCACTGCCACGGTGTaGAGTGGGGACAGCCCGGGAACCACTCAGCATCTCTCCCAAGGG +
Preference number: 5 (lower is better)
Translates to: RTMKHVLQQLFTATV*SGDSPGTTQHLSQG
Trigger: CCCTTGGGAGAGATGCTGAGTGGTTCCCGGGCTGTCCCCACTCCACACCGTGGCAGTGAAGAGCTGCTGAAGTACATGCTTCATAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR CAA 90 bp CTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGGGGAACGCCATGGAGTaGAAATTGTGCCGGGTGCTC +
Preference number: 5 (lower is better)
Translates to: LPTQGSKRIHSEFRADLGGNAME*KLCRVL
Trigger: GAGCACCCGGCACAATTTCAACTCCATGGCGTTCCC...CCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS GCA 90 bp GAGAGACGCAAGGACTATGAAGCATGTACTTCAGCAGCTCTTCACTaGCACGGTGTGGAGTGGGGACAGCCCGGGAACCACTCAGCATCT +
Preference number: 5 (lower is better)
Translates to: ERRKDYEACTSAALH*HGVEWGQPGNHSAS
Trigger: AGATGCTGAGTGGTTCCCGGGCTGTCCCCACTCCACACCGTGGCAGTGAAGAGCTGCTGAAGTACATGCTTCATAGTCCTTGCGTCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR CAA 90 bp CTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGGCCATGGAGTTGAAATaGTGCCGGGTGCTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: LPTQGSKRIHSEFRADLGAMELK*CRVLLK
Trigger: CTTCAGGAGCACCCGGCACAATTTCAACTCCATGGC...CCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CAA 90 bp CCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTACGAACACCAGGAGGTaGGCCCAGACCATGCGGGCA +
Preference number: 5 (lower is better)
Translates to: PREYTVSSGLISGSLLLVTNTRR*AQTMRA
Trigger: TGCCCGCATGGTCTGGGCCAACCTCCTGGTGTTCGT...AACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CAA 90 bp CTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGAGAGAGTCCTGGCTTTaGTGGGCCTTAGCACTGGGA +
Preference number: 5 (lower is better)
Translates to: LPTQGSKRIHSEFRADLGRESWL*WALALG
Trigger: TCCCAGTGCTAAGGCCCACAAAAGCCAGGACTCTCT...CCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CAA 90 bp CCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTGATCTCGGGCTCCTaGCTACTGGTTCCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: PKAPREYTVSSGLISGSLLISGS*LLVPAS
Trigger: GGAAGCTGGAACCAGTAGCAAGGAGCCCGAGATCAG...CAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CAA 90 bp CCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTCGGGGGTCTCTGACATaGGCCTTGCTCTGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: PREYTVSSGLISGSLLLVRGSLT*ALLWPQ
Trigger: CTGAGGCCAGAGCAAGGCCAATGTCAGAGACCCCCG...AACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CAA 90 bp GCTGCACCCTGGCCAGCAGGAACCCACTCTGGCCAGGTGAGCTGGTTCTGGGGGAAGTACAGCAGATATTaGCTGACTTCCAAGTTTCAG +
Preference number: 5 (lower is better)
Translates to: AAPWPAGTHSGQVSWFWGKYSRY*LTSKFQ
Trigger: CTGAAACTTGGAAGTCAGCAAATATCTGCTGTACTT...CCCCCAGAACCAGCTCACCTGGCCAGAGTGGGTTCCTGCTGGCCAGGGTGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS GCA 90 bp TCCAGCCATACAGGCTGGACTTTGCAAGTCCAGTCTGCAGGAAGCTaGACAGGGCAAGAGACCTTTGTGCAGACGGTCCTCCCTAATGGA +
Preference number: 5 (lower is better)
Translates to: SSHTGWTLQVQSAGS*TGQETFVQTVLPNG
Trigger: TCCATTAGGGAGGACCGTCTGCACAAAGGTCTCTTGCCCTGTGCAGCTTCCTGCAGACTGGACTTGCAAAGTCCAGCCTGTATGGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS GCA 90 bp AGGAGATTGGCAGGCATGGGAACTCCAGCCATACAGGCTGGACTTTaGAAGTCCAGTCTGCAGGAAGCTGCACAGGGCAAGAGACCTTTG +
Preference number: 5 (lower is better)
Translates to: RRLAGMGTPAIQAGL*KSSLQEAAQGKRPL
Trigger: CAAAGGTCTCTTGCCCTGTGCAGCTTCCTGCAGACTGGACTTGCAAAGTCCAGCCTGTATGGCTGGAGTTCCCATGCCTGCCAATCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR CAA 90 bp CTGCCCACCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGTTGGCATCTGAGAGCTaGCTGGTTATGTACAGGGCG +
Preference number: 5 (lower is better)
Translates to: LPTQGSKRIHSEFRADLGLASES*LVMYRA
Trigger: CGCCCTGTACATAACCAGCAAGCTCTCAGATGCCAA...CCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGGTGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CAA 90 bp CCCAAGGCTCCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGTCAGTCCTCTTGCCCTaGTCCCTGTCCCTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: PKAPREYTVSSGLISGSLSVLLP*SLSLSL
Trigger: AAGAGAGAGGGACAGGGACAAGGGCAAGAGGACTGA...CAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGGAGCCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS TCA 90 bp CAGCCCGGGAACCACTCAGCATCTCTCCCAAGGGCCCAGGTTGAATaGAGCGTGTTCACACCACAGGACACTGAGCACTCTAAAATGAGA +
Preference number: 5 (lower is better)
Translates to: QPGNHSASLPRAQVE*SVFTPQDTEHSKMR
Trigger: TCTCATTTTAGAGTGCTCAGTGTCCTGTGGTGTGAACACGCTTCATTCAACCTGGGCCCTTGGGAGAGATGCTGAGTGGTTCCCGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS-3UTR CAA 90 bp CCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTGATCTTCCCTTCCTGTaGGGCCTATACTCCTGTGGC +
Preference number: 5 (lower is better)
Translates to: PREYTVSSGLISGSLLLVDLPFL*GLYSCG
Trigger: GCCACAGGAGTATAGGCCCAACAGGAAGGGAAGATC...AACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS-3UTR CAA 90 bp CCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTTTGGCATCTGAGAGCTaGCTGGTTATGTACAGGGCG +
Preference number: 5 (lower is better)
Translates to: PREYTVSSGLISGSLLLVLASES*LVMYRA
Trigger: CGCCCTGTACATAACCAGCAAGCTCTCAGATGCCAA...AACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
ENST00000438013.3
CDS-3UTR CAA 90 bp CCAAGAGAATACACAGTGAGTTCAGGGCTGATCTCGGGCTCCTTGCTACTGGTTAACTCCAAGTCACCCTaGAGGTCTAACCCCTGGACA +
Preference number: 5 (lower is better)
Translates to: PREYTVSSGLISGSLLLVNSKSP*RSNPWT
Trigger: TGTCCAGGGGTTAGACCTCAAGGGTGACTTGGAGTT...AACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCACTGTGTATTCTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS GCA 72 bp ACCAGCACCCAGAGGACCGCGCACACGGCCGCAGCCTaGCTGGGGGACCGCAGCCCGCGGGCACGCAGCGGG +
Preference number: 6 (lower is better)
Translates to: TSTQRTAHTAAA*LGDRSPRARSG
Trigger: CCCGCTGCGTGCCCGCGGGCTGCGGTCCCCCAGGCAGGCTGCGGCCGTGTGCGCGGTCCTCTGGGTGCTGGT
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000407714.1
ENST00000430267.2
ENST00000438013.3
CDS GCA 72 bp GGCCCAGACCATGCGGGCAGCCTTGCGGGTGGCCTCTaGCTGCCCCACGTCGGTGGGTGGCCTCTGGGCCAG +
Preference number: 6 (lower is better)
Translates to: GPDHAGSLAGGL*LPHVGGWPLGQ
Trigger: CTGGCCCAGAGGCCACCCACCGACGTGGGGCAGGCAGAGGCCACCCGCAAGGCTGCCCGCATGGTCTGGGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000407714.1
ENST00000430267.2
ENST00000438013.3
CDS GCA 72 bp CAGACCATGCGGGCAGCCTTGCGGGTGGCCTCTGCCTaGCCCACGTCGGTGGGTGGCCTCTGGGCCAGGGCA +
Preference number: 6 (lower is better)
Translates to: QTMRAALRVASA*PTSVGGLWARA
Trigger: TGCCCTGGCCCAGAGGCCACCCACCGACGTGGGGCAGGCAGAGGCCACCCGCAAGGCTGCCCGCATGGTCTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000407714.1
ENST00000430267.2
ENST00000438013.3
CDS CCA 72 bp GGAGGTTGGCCCAGACCATGCGGGCAGCCTTGCGGGTaGCCTCTGCCTGCCCCACGTCGGTGGGTGGCCTCT +
Preference number: 6 (lower is better)
Translates to: GGWPRPCGQPCG*PLPAPRRWVAS
Trigger: AGAGGCCACCCACCGACGTGGGGCAGGCAGAGGCCACCCGCAAGGCTGCCCGCATGGTCTGGGCCAACCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000407714.1
ENST00000430267.2
ENST00000438013.3
CDS TCA 72 bp GAATCCCCAGGAGCCAGCGAGCCACCAGGGAGCCGATaGCCAGCACCCAGAGGACCGCGCACACGGCCGCAG +
Preference number: 6 (lower is better)
Translates to: ESPGASEPPGSR*PAPRGPRTRPQ
Trigger: CTGCGGCCGTGTGCGCGGTCCTCTGGGTGCTGGTCATCGGCTCCCTGGTGGCTCGCTGGCTCCTGGGGATTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000407714.1
ENST00000430267.2
ENST00000438013.3
CDS CAA 90 bp CAGACCACGAACACCAGGAGGTTGGCCCAGACCATGCGGGCAGCCTaGCGGGTGGCCTCTGCCTGCCCCACGTCGGTGGGTGGCCTCTGG +
Preference number: 6 (lower is better)
Translates to: QTTNTRRLAQTMRAA*RVASACPTSVGGLW
Trigger: CCAGAGGCCACCCACCGACGTGGGGCAGGCAGAGGCCACCCGCAAGGCTGCCCGCATGGTCTGGGCCAACCTCCTGGTGTTCGTGGTCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000407714.1
ENST00000430267.2
ENST00000438013.3
CDS CAA 90 bp AGCCCCACGTGCAGGGGCAGGAAGCAGACCACGAACACCAGGAGGTaGGCCCAGACCATGCGGGCAGCCTTGCGGGTGGCCTCTGCCTGC +
Preference number: 6 (lower is better)
Translates to: SPTCRGRKQTTNTRR*AQTMRAALRVASAC
Trigger: GCAGGCAGAGGCCACCCGCAAGGCTGCCCGCATGGTCTGGGCCAACCTCCTGGTGTTCGTGGTCTGCTTCCTGCCCCTGCACGTGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000407714.1
ENST00000430267.2
ENST00000438013.3
CDS GCA 72 bp GATCGTCTCCAGGAGGGCACAGGCGTTCCAGCCCACTaGGAGGCGCACTGTCAGCCCCACGTGCAGGGGCAG +
Preference number: 6 (lower is better)
Translates to: DRLQEGTGVPAH*EAHCQPHVQGQ
Trigger: CTGCCCCTGCACGTGGGGCTGACAGTGCGCCTCGCAGTGGGCTGGAACGCCTGTGCCCTCCTGGAGACGATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000407714.1
ENST00000430267.2
ENST00000438013.3
CDS CCA 72 bp GCAGGGGCAGGAAGCAGACCACGAACACCAGGAGGTTaGCCCAGACCATGCGGGCAGCCTTGCGGGTGGCCT +
Preference number: 6 (lower is better)
Translates to: AGAGSRPRTPGG*PRPCGQPCGWP
Trigger: AGGCCACCCGCAAGGCTGCCCGCATGGTCTGGGCCAACCTCCTGGTGTTCGTGGTCTGCTTCCTGCCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000407714.1
ENST00000430267.2
ENST00000438013.3
CDS CAA 72 bp TGCAGGGGCAGGAAGCAGACCACGAACACCAGGAGGTaGGCCCAGACCATGCGGGCAGCCTTGCGGGTGGCC +
Preference number: 6 (lower is better)
Translates to: CRGRKQTTNTRR*AQTMRAALRVA
Trigger: GGCCACCCGCAAGGCTGCCCGCATGGTCTGGGCCAACCTCCTGGTGTTCGTGGTCTGCTTCCTGCCCCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000407714.1
ENST00000430267.2
ENST00000438013.3
CDS CCA 72 bp CTCACAGCCACACGTCCCACCACCTGGGTTACTCAGTaGGTCCAGGAAGAACCCGGAGGGGTGAGGGCGGGA +
Preference number: 6 (lower is better)
Translates to: LTATRPTTWVTQ*VQEEPGGVRAG
Trigger: TCCCGCCCTCACCCCTCCGGGTTCTTCCTGGACCCACTGAGTAACCCAGGTGGTGGGACGTGTGGCTGTGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS CAA 72 bp ATCCCAGTCCCACACCTGGGATCAGGGATTCACCCCTaGAGCTCCCAGGGGCCAGAGCCTGTGACGGCAGCC +
Preference number: 6 (lower is better)
Translates to: IPVPHLGSGIHP*SSQGPEPVTAA
Trigger: GGCTGCCGTCACAGGCTCTGGCCCCTGGGAGCTCAAGGGGTGAATCCCTGATCCCAGGTGTGGGACTGGGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS TCA 72 bp TGTCACACGCAGGCAGGTGTGAGACGGAGCTGCTGGTaGGCGCCCAGAGTCCAGGACTCACAGCCACACGTC +
Preference number: 6 (lower is better)
Translates to: CHTQAGVRRSCW*APRVQDSQPHV
Trigger: GACGTGTGGCTGTGAGTCCTGGACTCTGGGCGCTCACCAGCAGCTCCGTCTCACACCTGCCTGCGTGTGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS CCA 72 bp ACCTGCTCAGAATCTACACCTCAGAGGCACCTGAGCTaGGCAGGCACTGTGCGTTGGGGAGGGCTCCGTGCG +
Preference number: 6 (lower is better)
Translates to: TCSESTPQRHLS*AGTVRWGGLRA
Trigger: CGCACGGAGCCCTCCCCAACGCACAGTGCCTGCCCAGCTCAGGTGCCTCTGAGGTGTAGATTCTGAGCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS CCA 72 bp CCACTGGAACCAATCGCTGGGATCTTCCCTTCCTGTTaGGCCTATACTCCTGTGGCAGCCCCCGCTGGGGGC +
Preference number: 6 (lower is better)
Translates to: PLEPIAGIFPSC*AYTPVAAPAGG
Trigger: GCCCCCAGCGGGGGCTGCCACAGGAGTATAGGCCCAACAGGAAGGGAAGATCCCAGCGATTGGTTCCAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS CCA 72 bp GGCTGTCCTCTGGGGCATCCTGCAGTGGCTTCCTGCTaGGCTGGTATGGAAGGTGGGAAGGACTCAGCCCAC +
Preference number: 6 (lower is better)
Translates to: GCPLGHPAVASC*AGMEGGKDSAH
Trigger: GTGGGCTGAGTCCTTCCCACCTTCCATACCAGCCCAGCAGGAAGCCACTGCAGGATGCCCCAGAGGACAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS CCA 72 bp GGGAGAAGCCTCTCCCCCAACCATCAGGCTGTCCTCTaGGGCATCCTGCAGTGGCTTCCTGCTGGGCTGGTA +
Preference number: 6 (lower is better)
Translates to: GRSLSPNHQAVL*GILQWLPAGLV
Trigger: TACCAGCCCAGCAGGAAGCCACTGCAGGATGCCCCAGAGGACAGCCTGATGGTTGGGGGAGAGGCTTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS CAA 72 bp CCCACTGGAACCAATCGCTGGGATCTTCCCTTCCTGTaGGGCCTATACTCCTGTGGCAGCCCCCGCTGGGGG +
Preference number: 6 (lower is better)
Translates to: PTGTNRWDLPFL*GLYSCGSPRWG
Trigger: CCCCCAGCGGGGGCTGCCACAGGAGTATAGGCCCAACAGGAAGGGAAGATCCCAGCGATTGGTTCCAGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS CAA 90 bp GGAGGGCTCCGTGCGACTGGCCTCCTACTCTCCCCACCTGAGTACTaGAATCCACCAGAAGTCCAGGGCCAGCCTTGGGCGGTGTGCAGA +
Preference number: 6 (lower is better)
Translates to: GGLRATGLLLSPPEY*NPPEVQGQPWAVCR
Trigger: TCTGCACACCGCCCAAGGCTGGCCCTGGACTTCTGGTGGATTCAAGTACTCAGGTGGGGAGAGTAGGAGGCCAGTCGCACGGAGCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS TCA 72 bp GCACAGCTAGAGGGCGATTCTTTTGCTGCCCCACCTTaGGTAGAGGCAGCCTGGGACCCTGCCTCGTGGGAG +
Preference number: 6 (lower is better)
Translates to: AQLEGDSFAAPP*VEAAWDPASWE
Trigger: CTCCCACGAGGCAGGGTCCCAGGCTGCCTCTACTCAAGGTGGGGCAGCAAAAGAATCGCCCTCTAGCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS GCA 72 bp GAGGGGGTCTGCACAGCTAGAGGGCGATTCTTTTGCTaGCCCACCTTGAGTAGAGGCAGCCTGGGACCCTGC +
Preference number: 6 (lower is better)
Translates to: EGVCTARGRFFC*PTLSRGSLGPC
Trigger: GCAGGGTCCCAGGCTGCCTCTACTCAAGGTGGGGCAGCAAAAGAATCGCCCTCTAGCTGTGCAGACCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS CCA 72 bp GAGCCACGGCCAGTGCAGACGCCTCCTGGAACTCCTTaGCCATGTAGTAGTAGCAGATGGCGTCCAGGCAGC +
Preference number: 6 (lower is better)
Translates to: EPRPVQTPPGTP*PCSSSRWRPGS
Trigger: GCTGCCTGGACGCCATCTGCTACTACTACATGGCCAAGGAGTTCCAGGAGGCGTCTGCACTGGCCGTGGCTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000407714.1
ENST00000430267.2
ENST00000438013.3
CDS CAA 72 bp CGTGCGACTGGCCTCCTACTCTCCCCACCTGAGTACTaGAATCCACCAGAAGTCCAGGGCCAGCCTTGGGCG +
Preference number: 6 (lower is better)
Translates to: RATGLLLSPPEY*NPPEVQGQPWA
Trigger: CGCCCAAGGCTGGCCCTGGACTTCTGGTGGATTCAAGTACTCAGGTGGGGAGAGTAGGAGGCCAGTCGCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS CCA 72 bp TTCCTGTTGGGCCTATACTCCTGTGGCAGCCCCCGCTaGGGGCCAGGAGATCCCAGAACCTGCTCAGAATCT +
Preference number: 6 (lower is better)
Translates to: FLLGLYSCGSPR*GPGDPRTCSES
Trigger: AGATTCTGAGCAGGTTCTGGGATCTCCTGGCCCCCAGCGGGGGCTGCCACAGGAGTATAGGCCCAACAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS TCA 72 bp AGGGTCTGGTGTCCAGGACACGGGCTAGAGTCATCCTaGCTCGGCCACCCCTGCAGCTGGGCAAACTTGTTT +
Preference number: 6 (lower is better)
Translates to: RVWCPGHGLESS*LGHPCSWANLF
Trigger: AAACAAGTTTGCCCAGCTGCAGGGGTGGCCGAGTCAGGATGACTCTAGCCCGTGTCCTGGACACCAGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS GCA 72 bp CAAGTTTCAGGAGCCCTTCCCCCGAGTGCAAAGTGCTaGACGCCCAGTGGTCTCTCTCCTCCCTTCTTGAGG +
Preference number: 6 (lower is better)
Translates to: QVSGALPPSAKC*TPSGLSPPFLR
Trigger: CCTCAAGAAGGGAGGAGAGAGACCACTGGGCGTGCAGCACTTTGCACTCGGGGGAAGGGCTCCTGAAACTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS CCA 72 bp TGTACTTCAGCAGCTCTTCACTGCCACGGTGTGGAGTaGGGACAGCCCGGGAACCACTCAGCATCTCTCCCA +
Preference number: 6 (lower is better)
Translates to: CTSAALHCHGVE*GQPGNHSASLP
Trigger: TGGGAGAGATGCTGAGTGGTTCCCGGGCTGTCCCCACTCCACACCGTGGCAGTGAAGAGCTGCTGAAGTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS CCA 72 bp TGGCGTCCAGGCAGCAGTTGGCATCTGAGAGCTTGCTaGTTATGTACAGGGCGCGACGGATCGTCTCCAGGA +
Preference number: 6 (lower is better)
Translates to: WRPGSSWHLRAC*LCTGRDGSSPG
Trigger: TCCTGGAGACGATCCGTCGCGCCCTGTACATAACCAGCAAGCTCTCAGATGCCAACTGCTGCCTGGACGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000407714.1
ENST00000430267.2
ENST00000438013.3
CDS CCA 72 bp CCTGAGCTCTTCTCTCCTGGGATCTGCCTGCTGTCATaGGGCAGGAAAGGAGGCAGAAGGAGCTCCACGTTC +
Preference number: 6 (lower is better)
Translates to: PELFSPGICLLS*GRKGGRRSSTF
Trigger: GAACGTGGAGCTCCTTCTGCCTCCTTTCCTGCCCCATGACAGCAGGCAGATCCCAGGAGAGAAGAGCTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS CAA 72 bp CAGATGGCGTCCAGGCAGCAGTTGGCATCTGAGAGCTaGCTGGTTATGTACAGGGCGCGACGGATCGTCTCC +
Preference number: 6 (lower is better)
Translates to: QMASRQQLASES*LVMYRARRIVS
Trigger: GGAGACGATCCGTCGCGCCCTGTACATAACCAGCAAGCTCTCAGATGCCAACTGCTGCCTGGACGCCATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000407714.1
ENST00000430267.2
ENST00000438013.3
CDS GCA 72 bp AGATGGCGTCCAGGCAGCAGTTGGCATCTGAGAGCTTaGTGGTTATGTACAGGGCGCGACGGATCGTCTCCA +
Preference number: 6 (lower is better)
Translates to: RWRPGSSWHLRA*WLCTGRDGSSP
Trigger: TGGAGACGATCCGTCGCGCCCTGTACATAACCAGCAAGCTCTCAGATGCCAACTGCTGCCTGGACGCCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000407714.1
ENST00000430267.2
ENST00000438013.3
CDS CCA 72 bp GACTGTGAAAGAGAAGACGGCAGTATCAGGACCGGGTaGGACACGGCTCCCACCAAGGAGTCACCAACTGCT +
Preference number: 6 (lower is better)
Translates to: DCEREDGSIRTG*DTAPTKESPTA
Trigger: AGCAGTTGGTGACTCCTTGGTGGGAGCCGTGTCCCACCCGGTCCTGATACTGCCGTCTTCTCTTTCACAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS CCA 72 bp AAGCATGTACTTCAGCAGCTCTTCACTGCCACGGTGTaGAGTGGGGACAGCCCGGGAACCACTCAGCATCTC +
Preference number: 6 (lower is better)
Translates to: KHVLQQLFTATV*SGDSPGTTQHL
Trigger: GAGATGCTGAGTGGTTCCCGGGCTGTCCCCACTCCACACCGTGGCAGTGAAGAGCTGCTGAAGTACATGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS CAA 72 bp CCGGGAACCACTCAGCATCTCTCCCAAGGGCCCAGGTaGAATGAAGCGTGTTCACACCACAGGACACTGAGC +
Preference number: 6 (lower is better)
Translates to: PGTTQHLSQGPR*NEACSHHRTLS
Trigger: GCTCAGTGTCCTGTGGTGTGAACACGCTTCATTCAACCTGGGCCCTTGGGAGAGATGCTGAGTGGTTCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS CAA 90 bp GGGGACAGCCCGGGAACCACTCAGCATCTCTCCCAAGGGCCCAGGTaGAATGAAGCGTGTTCACACCACAGGACACTGAGCACTCTAAAA +
Preference number: 6 (lower is better)
Translates to: GDSPGTTQHLSQGPR*NEACSHHRTLSTLK
Trigger: TTTTAGAGTGCTCAGTGTCCTGTGGTGTGAACACGCTTCATTCAACCTGGGCCCTTGGGAGAGATGCTGAGTGGTTCCCGGGCTGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS GCA 72 bp ACAGGCTGGACTTTGCAAGTCCAGTCTGCAGGAAGCTaGACAGGGCAAGAGACCTTTGTGCAGACGGTCCTC +
Preference number: 6 (lower is better)
Translates to: TGWTLQVQSAGS*TGQETFVQTVL
Trigger: GAGGACCGTCTGCACAAAGGTCTCTTGCCCTGTGCAGCTTCCTGCAGACTGGACTTGCAAAGTCCAGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS GCA 72 bp CTGCCAAGGGGCTCTCAGGTCACACATACCCAGGGCTaGAACTTTCATACTAGCCTCGGTGTGGCCCAGTAT +
Preference number: 6 (lower is better)
Translates to: LPRGSQVTHTQG*NFHTSLGVAQY
Trigger: ATACTGGGCCACACCGAGGCTAGTATGAAAGTTGCAGCCCTGGGTATGTGTGACCTGAGAGCCCCTTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS GCA 72 bp TGCAGCTGGGCAAACTTGTTTCCTCATCATAAGGGGTaGTGGTGTCACACGCAGGCAGGTGTGAGACGGAGC +
Preference number: 6 (lower is better)
Translates to: CSWANLFPHHKG*WCHTQAGVRRS
Trigger: GCTCCGTCTCACACCTGCCTGCGTGTGACACCAGCACCCCTTATGATGAGGAAACAAGTTTGCCCAGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS CCA 72 bp CCGAGGACATCCCCAGAACCCACTGGAACCAATCGCTaGGATCTTCCCTTCCTGTTGGGCCTATACTCCTGT +
Preference number: 6 (lower is better)
Translates to: PRTSPEPTGTNR*DLPFLLGLYSC
Trigger: ACAGGAGTATAGGCCCAACAGGAAGGGAAGATCCCAGCGATTGGTTCCAGTGGGTTCTGGGGATGTCCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS CCA 72 bp GTCCCCGGGAACTCCAGGTCCCCAGTCCATGAGGGATaGAGGGCACAGGTTTCAGACAGAAACGAAACATTC +
Preference number: 6 (lower is better)
Translates to: VPGNSRSPVHEG*RAQVSDRNETF
Trigger: GAATGTTTCGTTTCTGTCTGAAACCTGTGCCCTCCATCCCTCATGGACTGGGGACCTGGAGTTCCCGGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS CCA 72 bp AGCTGGGCAAACTTGTTTCCTCATCATAAGGGGTGCTaGTGTCACACGCAGGCAGGTGTGAGACGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: SWANLFPHHKGC*CHTQAGVRRSC
Trigger: GCAGCTCCGTCTCACACCTGCCTGCGTGTGACACCAGCACCCCTTATGATGAGGAAACAAGTTTGCCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3
CDS CAA 90 bp CAGGAGATTGGCAGGCATGGGAACTCCAGCCATACAGGCTGGACTTaGCAAGTCCAGTCTGCAGGAAGCTGCACAGGGCAAGAGACCTTT +
Preference number: 6 (lower is better)
Translates to: QEIGRHGNSSHTGWT*QVQSAGSCTGQETF
Trigger: AAAGGTCTCTTGCCCTGTGCAGCTTCCTGCAGACTGGACTTGCAAAGTCCAGCCTGTATGGCTGGAGTTCCCATGCCTGCCAATCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS TCA 72 bp AACCACTCAGCATCTCTCCCAAGGGCCCAGGTTGAATaGAGCGTGTTCACACCACAGGACACTGAGCACTCT +
Preference number: 6 (lower is better)
Translates to: NHSASLPRAQVE*SVFTPQDTEHS
Trigger: AGAGTGCTCAGTGTCCTGTGGTGTGAACACGCTTCATTCAACCTGGGCCCTTGGGAGAGATGCTGAGTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319838.10
ENST00000403859.1
CDS CCA 72 bp GGTCGCTGGAGCCACAGGTGTTGTAGGTGCCATTCATaGTCAGAGAGACGCAAGGACTATGAAGCATGTACT +
Preference number: 6 (lower is better)
Translates to: GRWSHRCCRCHS*SERRKDYEACT
Trigger: AGTACATGCTTCATAGTCCTTGCGTCTCTCTGACCATGAATGGCACCTACAACACCTGTGGCTCCAGCGACC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319838.10
ENST00000403859.1
ENST00000430267.2
CDS CAA 72 bp GAAAGCATGGGTGCCGTAAAGAACTCCAAGTCACCCTaGAGGTCTAACCCCTGGACAGATCCTCTTCCCATC +
Preference number: 6 (lower is better)
Translates to: ESMGAVKNSKSP*RSNPWTDPLPI
Trigger: GATGGGAAGAGGATCTGTCCAGGGGTTAGACCTCAAGGGTGACTTGGAGTTCTTTACGGCACCCATGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438013.3