Pregenerated sensors for GPR34 (Homo sapiens)
Ensembl gene IDs: ENSG00000171659Ensembl transcript IDs: ENST00000378138.5, ENST00000378142.9, ENST00000620846.1, ENST00000649219.1
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGTTATAAAGCGCATTCTGTGGGAGGAGTAAGGCCAGCTGCTGACTaGAGTTGTCGTCATTGTTATGGTATGACTTCTCATTGTCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: GYKAHSVGGVRPAAD*SCRHCYGMTSHCLL Trigger: CAGAAGACAATGAGAAGTCATACCATAACAATGACGACAACTTCAGTCAGCAGCTGGCCTTACTCCTCCCACAGAATGCGCTTTATAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378142.9 |
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| CDS TCA 90 bp | GGTTATAAAGCGCATTCTGTGGGAGGAGTAAGGCCAGCTGCTGACTaGAGTTGTCGTCATTGTTATGGTATGACTTCTCATTGTCTTCTA | + |
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Preference number: 5 (lower is better) Translates to: GYKAHSVGGVRPAAD*SCRHCYGMTSHCLL Trigger: TAGAAGACAATGAGAAGTCATACCATAACAATGACGACAACTTCAGTCAGCAGCTGGCCTTACTCCTCCCACAGAATGCGCTTTATAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378138.5 ENST00000649219.1 |
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| CDS TCA 90 bp | CACTGCCACAGATGTATCATGCAGGGAGTATCCTGGTTTAAATTCTaGAGTGCTTTCACTCCTACTTGGTTCACCTTGAAATCGTCTAAA | + |
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Preference number: 5 (lower is better) Translates to: HCHRCIMQGVSWFKF*SAFTPTWFTLKSSK Trigger: TTTAGACGATTTCAAGGTGAACCAAGTAGGAGTGAAAGCACTTCAGAATTTAAACCAGGATACTCCCTGCATGATACATCTGTGGCAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000378138.5 ENST00000378142.9 ENST00000620846.1 ENST00000649219.1 |
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| CDS TCA 90 bp | CATTTGGTGTTGCTGCTGACTGAAGTTGTCGTCATTGTTATGGTATaGCTTCTCATTGTCTTCTGTGGAGATCAAAAAGTGAAAGTGCTA | + |
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Preference number: 5 (lower is better) Translates to: HLVLLLTEVVVIVMV*LLIVFCGDQKVKVL Trigger: TAGCACTTTCACTTTTTGATCTCCACAGAAGACAATGAGAAGTCATACCATAACAATGACGACAACTTCAGTCAGCAGCAACACCAAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000620846.1 |
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| CDS TCA 72 bp | AGTAAAAGGAGCAGAACCCCAAGCTTCCCTAGACACTaGGACTCGTCTTGGTTGTGTCAGCTGGGCTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: SKRSRTPSFPRH*DSSWLCQLGSS Trigger: GGAAGAGCCCAGCTGACACAACCAAGACGAGTCTCAGTGTCTAGGGAAGCTTGGGGTTCTGCTCCTTTTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378142.9 |
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| CDS TCA 72 bp | GCGCATTCTGTGGGAGGAGTAAGGCCAGCTGCTGACTaGAGTTGTCGTCATTGTTATGGTATGACTTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: AHSVGGVRPAAD*SCRHCYGMTSH Trigger: ATGAGAAGTCATACCATAACAATGACGACAACTTCAGTCAGCAGCTGGCCTTACTCCTCCCACAGAATGCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000378138.5 ENST00000378142.9 ENST00000649219.1 |
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| CDS TCA 72 bp | TTCATCCATGGGACAGGTAGTAACATTTGGTGTTGCTaGGAAGTTTTGTGGCGGTTGGTCGCTATGATTGGT | + |
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Preference number: 6 (lower is better) Translates to: FIHGTGSNIWCC*EVLWRLVAMIG Trigger: ACCAATCATAGCGACCAACCGCCACAAAACTTCTCAGCAACACCAAATGTTACTACCTGTCCCATGGATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000378138.5 ENST00000378142.9 ENST00000649219.1 |
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| CDS TCA 72 bp | CAGCTGCTGACTGAAGTTGTCGTCATTGTTATGGTATaGCTTCTCATTGTCTTCTGTGGAGATCAAAAAGTG | + |
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Preference number: 6 (lower is better) Translates to: QLLTEVVVIVMV*LLIVFCGDQKV Trigger: CACTTTTTGATCTCCACAGAAGACAATGAGAAGTCATACCATAACAATGACGACAACTTCAGTCAGCAGCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378142.9 |
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| CDS TCA 72 bp | CAGCTGCTGACTGAAGTTGTCGTCATTGTTATGGTATaGCTTCTCATTGTCTTCTATTTGGTAATAGTCGCA | + |
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Preference number: 6 (lower is better) Translates to: QLLTEVVVIVMV*LLIVFYLVIVA Trigger: TGCGACTATTACCAAATAGAAGACAATGAGAAGTCATACCATAACAATGACGACAACTTCAGTCAGCAGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378138.5 ENST00000649219.1 |
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| CDS TCA 72 bp | AGATGTATCATGCAGGGAGTATCCTGGTTTAAATTCTaGAGTGCTTTCACTCCTACTTGGTTCACCTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: RCIMQGVSWFKF*SAFTPTWFTLK Trigger: TTTCAAGGTGAACCAAGTAGGAGTGAAAGCACTTCAGAATTTAAACCAGGATACTCCCTGCATGATACATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000378138.5 ENST00000378142.9 ENST00000620846.1 ENST00000649219.1 |
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| CDS TCA 72 bp | TTGCTGCTGACTGAAGTTGTCGTCATTGTTATGGTATaGCTTCTCATTGTCTTCTGTGGAGATCAAAAAGTG | + |
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Preference number: 6 (lower is better) Translates to: LLLTEVVVIVMV*LLIVFCGDQKV Trigger: CACTTTTTGATCTCCACAGAAGACAATGAGAAGTCATACCATAACAATGACGACAACTTCAGTCAGCAGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000620846.1 |
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| CDS GCA 72 bp | TGTACATGTTCATATAAAACAGTGTTCCCACAACCTTaGACAGAATCACACCTAGTGTCCACTTGTTTTGGT | + |
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Preference number: 6 (lower is better) Translates to: CTCSYKTVFPQP*TESHLVSTCFG Trigger: ACCAAAACAAGTGGACACTAGGTGTGATTCTGTGCAAGGTTGTGGGAACACTGTTTTATATGAACATGTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000378138.5 ENST00000378142.9 ENST00000620846.1 ENST00000649219.1 |
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| CDS GCA 72 bp | GAACTAGACTGTATTTTCACTGCCACAGATGTATCATaGAGGGAGTATCCTGGTTTAAATTCTGAAGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: ELDCIFTATDVS*REYPGLNSEVL Trigger: AAGCACTTCAGAATTTAAACCAGGATACTCCCTGCATGATACATCTGTGGCAGTGAAAATACAGTCTAGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000378138.5 ENST00000378142.9 ENST00000620846.1 ENST00000649219.1 |
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| CDS GCA 72 bp | ACCTCAAGTACTTTTAGAACTAGACTGTATTTTCACTaGCACAGATGTATCATGCAGGGAGTATCCTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: TSSTFRTRLYFH*HRCIMQGVSWF Trigger: AAACCAGGATACTCCCTGCATGATACATCTGTGGCAGTGAAAATACAGTCTAGTTCTAAAAGTACTTGAGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000378138.5 ENST00000378142.9 ENST00000649219.1 |
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| CDS CAA 90 bp | GCTTTCACTCCTACTTGGTTCACCTTGAAATCGTCTAAAAAGAAGTaGGCACATTATTTTGCGAATGTTACTGGACATCAGGAAATACAT | + |
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Preference number: 6 (lower is better) Translates to: AFTPTWFTLKSSKKK*AHYFANVTGHQEIH Trigger: ATGTATTTCCTGATGTCCAGTAACATTCGCAAAATAATGTGCCAACTTCTTTTTAGACGATTTCAAGGTGAACCAAGTAGGAGTGAAAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000378138.5 ENST00000378142.9 ENST00000620846.1 ENST00000649219.1 |
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