Pregenerated sensors for GPR22 (Homo sapiens)
Ensembl gene IDs: ENSG00000172209Ensembl transcript IDs: ENST00000304402.6, ENST00000473300.1, ENST00000496754.1, ENST00000638179.1, ENST00000639742.2, ENST00000640321.1
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ACGGTGTCGTTTCACAGCTCGCCGGAGGGCAATTATTACAGAAACTaGAGTTCTTACACCAAAGACTACATTTCTCCCACCACTGCTTTG | + |
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Preference number: 5 (lower is better) Translates to: TVSFHSSPEGNYYRN*SSYTKDYISPTTAL Trigger: CAAAGCAGTGGTGGGAGAAATGTAGTCTTTGGTGTAAGAACTTCAGTTTCTGTAATAATTGCCCTCCGGCGAGCTGTGAAACGACACCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000304402.6 ENST00000639742.2 |
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| CDS TCA 90 bp | GATGTCATATCTGTCCAAAGTGATAGCAAAAACGTTGATTGCTGTTaGGACACTTGCAAAAGATACACAAGCCTCATGGAAACAGCAAAT | + |
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Preference number: 5 (lower is better) Translates to: DVISVQSDSKNVDCC*DTCKRYTSLMETAN Trigger: ATTTGCTGTTTCCATGAGGCTTGTGTATCTTTTGCAAGTGTCTCAACAGCAATCAACGTTTTTGCTATCACTTTGGACAGATATGACATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000304402.6 ENST00000639742.2 |
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| CDS TCA 90 bp | ACAGGTGATAATACATTCCCAGTTCAGTGTAGTATTCATTTGTACTaGCACATAAAAGTGTCTTGTTTTCCCAGGTATTTCCACTTTGAA | + |
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Preference number: 5 (lower is better) Translates to: TGDNTFPVQCSIHLY*HIKVSCFPRYFHFE Trigger: TTCAAAGTGGAAATACCTGGGAAAACAAGACACTTTTATGTGTCAGTACAAATGAATACTACACTGAACTGGGAATGTATTATCACCTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000304402.6 ENST00000639742.2 |
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| CDS GCA 72 bp | TGTGGTGGGGTGCATGCATCTTCTGACCTACCTGTTTaGTGTTGCCTTATGGGCCTTTTGGTTCACTATGAC | + |
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Preference number: 6 (lower is better) Translates to: CGGVHASSDLPV*CCLMGLLVHYD Trigger: GTCATAGTGAACCAAAAGGCCCATAAGGCAACAGCAAACAGGTAGGTCAGAAGATGCATGCACCCCACCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000496754.1 ENST00000640321.1 |
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| CDS GCA 72 bp | GGGGTGCATGCATCTTCTGACCTACCTGTTTGCTGTTaGCTTATGGGCCTTTTGGTTCACTATGACAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: GVHASSDLPVCC*LMGLLVHYDSF Trigger: AAAACTGTCATAGTGAACCAAAAGGCCCATAAGGCAACAGCAAACAGGTAGGTCAGAAGATGCATGCACCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000496754.1 ENST00000640321.1 |
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| CDS CAA 72 bp | CTCCTTAATGTCTTAAAGTCGTGTTACAAGAACATCTaGCAGTTCGTAGTTCAGACAGCTAGGGAGATGCTC | + |
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Preference number: 6 (lower is better) Translates to: LLNVLKSCYKNI*QFVVQTAREML Trigger: GAGCATCTCCCTAGCTGTCTGAACTACGAACTGCAAGATGTTCTTGTAACACGACTTTAAGACATTAAGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000304402.6 ENST00000473300.1 ENST00000496754.1 ENST00000638179.1 ENST00000639742.2 ENST00000640321.1 |
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| CDS TCA 72 bp | TCTGTCCAAAGTGATAGCAAAAACGTTGATTGCTGTTaGGACACTTGCAAAAGATACACAAGCCTCATGGAA | + |
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Preference number: 6 (lower is better) Translates to: SVQSDSKNVDCC*DTCKRYTSLME Trigger: TTCCATGAGGCTTGTGTATCTTTTGCAAGTGTCTCAACAGCAATCAACGTTTTTGCTATCACTTTGGACAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000304402.6 ENST00000639742.2 |
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| CDS TCA 72 bp | TTAAGTTGGATTTCATGCAGTAAAGTACCAATACAGTaGGGTTGCTGCCAAGTCCCAACACAATTTCTAACA | + |
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Preference number: 6 (lower is better) Translates to: LSWISCSKVPIQ*GCCQVPTQFLT Trigger: TGTTAGAAATTGTGTTGGGACTTGGCAGCAACCTCACTGTATTGGTACTTTACTGCATGAAATCCAACTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000304402.6 ENST00000639742.2 |
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| CDS CAA 72 bp | TCCAAATGGATATCATTAACATTACAGCTCTGCCCATaGTCAGAATTCGGTTTGCAGGTTTTACAGAGATGT | + |
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Preference number: 6 (lower is better) Translates to: SKWISLTLQLCP*SEFGLQVLQRC Trigger: ACATCTCTGTAAAACCTGCAAACCGAATTCTGACAATGGGCAGAGCTGTAATGTTAATGATATCCATTTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000304402.6 ENST00000639742.2 |
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| CDS TCA 72 bp | TGTCTTTTTCTTTCTTGCTTTCTTCTTCTGCCCTGTTaGAAATCTTGTGCCTATTCGAATATTAAGAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: CLFLSCFLLLPC*KSCAYSNIKSL Trigger: CAGGCTCTTAATATTCGAATAGGCACAAGATTTTCAACAGGGCAGAAGAAGAAAGCAAGAAAGAAAAAGACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000304402.6 ENST00000639742.2 |
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| CDS CAA 72 bp | CTTAACGGATATGATAGTGGTTGGTACATATTGGTGTaGATGTCATCAATGTCATCTCGCACTGTAATGTTA | + |
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Preference number: 6 (lower is better) Translates to: LNGYDSGWYILV*MSSMSSRTVML Trigger: TAACATTACAGTGCGAGATGACATTGATGACATCAACACCAATATGTACCAACCACTATCATATCCGTTAAG 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000304402.6 ENST00000639742.2 |
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| CDS TCA 72 bp | ACAATTTCTAACATAAGAAATCCGGTGAGAGACACTTaGAAGCTTAACGGATATGATAGTGGTTGGTACATA | + |
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Preference number: 6 (lower is better) Translates to: TISNIRNPVRDT*KLNGYDSGWYI Trigger: TATGTACCAACCACTATCATATCCGTTAAGCTTTCAAGTGTCTCTCACCGGATTTCTTATGTTAGAAATTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000304402.6 ENST00000639742.2 |
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| CDS TCA 72 bp | AATACATTCCCAGTTCAGTGTAGTATTCATTTGTACTaGCACATAAAAGTGTCTTGTTTTCCCAGGTATTTC | + |
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Preference number: 6 (lower is better) Translates to: NTFPVQCSIHLY*HIKVSCFPRYF Trigger: GAAATACCTGGGAAAACAAGACACTTTTATGTGTCAGTACAAATGAATACTACACTGAACTGGGAATGTATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000304402.6 ENST00000639742.2 |
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