RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPR20 (Homo sapiens)

Ensembl gene IDs: ENSG00000204882

Ensembl transcript IDs: ENST00000377741.4, ENST00000613887.2

Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGAGATGGAACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTaGCATGCCCAGATGAGTCCTGACCTTCGGCCCCTGGCAGAGCCC +
Preference number: 1 (lower is better)
Translates to: RDGTDCHPWHGGCPR*HAQMSPDLRPLAEP
Trigger: GGGCTCTGCCAGGGGCCGAAGGTCAGGACTCATCTGGGCATGCCAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTTCCATCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
3UTR CCA 90 bp ACGCTCAATGCGGTGCTCTGGGTAGCCATCACCAATCAATCGAGATaGAACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTGGCA +
Preference number: 1 (lower is better)
Translates to: TLNAVLWVAITNQSR*NRLPPLAWWVSTLA
Trigger: TGCCAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTTCCATCTCGATTGATTGGTGATGGCTACCCAGAGCACCGCATTGAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
3UTR-3UTR TCA 90 bp ATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACATTGCTAGCTGGCATGCCCAGATaGGTCCTGACCTTCGGCCCC +
Preference number: 2 (lower is better)
Translates to: ITGIQATTSHRSQWQTLLAGMPR*VLTFGP
Trigger: GGGGCCGAAGGTCAGGACTCATCTGGGCATGCCAGC...TAGCAATGTCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
3UTR-3UTR CCA 90 bp AATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACATTGCTCCACCCCTGGCATGGTaGGTGTCCACGCTGGCATGC +
Preference number: 2 (lower is better)
Translates to: NHRHSGHHIPSEPVADIAPPLAW*VSTLAC
Trigger: GCATGCCAGCGTGGACACCCACCATGCCAGGGGTGG...AGCAATGTCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
3UTR CAA 90 bp GCGGTGCTCTGGGTAGCCATCACCAATCAATCGAGATGGAACCGATaGCCACCCCTGGCATGGTGGGTGTCCACGCTGGCATGCCCAGAT +
Preference number: 2 (lower is better)
Translates to: AVLWVAITNQSRWNR*PPLAWWVSTLACPD
Trigger: ATCTGGGCATGCCAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTTCCATCTCGATTGATTGGTGATGGCTACCCAGAGCACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
3UTR-3UTR CCA 90 bp AATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACATTGCTTTGCCACCCCTGGCATaGTGGGTGTCCACGCTGGCA +
Preference number: 2 (lower is better)
Translates to: NHRHSGHHIPSEPVADIALPPLA*WVSTLA
Trigger: TGCCAGCGTGGACACCCACCATGCCAGGGGTGGCAA...AGCAATGTCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
3UTR-3UTR CCA 90 bp AACAGCAAATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGAACCGATTGCCACCCCTaGCATGGTGGGTGTCCACGC +
Preference number: 2 (lower is better)
Translates to: NSKSPAFRPPHPIGASGRTDCHP*HGGCPR
Trigger: GCGTGGACACCCACCATGCCAGGGGTGGCAATCGGT...TCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGATTTGCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
3UTR TCA 72 bp CCTGGCATGGTGGGTGTCCACGCTGGCATGCCCAGATaGGTCCTGACCTTCGGCCCCTGGCAGAGCCCTGCT +
Preference number: 3 (lower is better)
Translates to: PGMVGVHAGMPR*VLTFGPWQSPA
Trigger: AGCAGGGCTCTGCCAGGGGCCGAAGGTCAGGACTCATCTGGGCATGCCAGCGTGGACACCCACCATGCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
3UTR CCA 72 bp ACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTaGCATGCCCAGATGAGTCCTGACCTTCGGCCCCTG +
Preference number: 3 (lower is better)
Translates to: TDCHPWHGGCPR*HAQMSPDLRPL
Trigger: CAGGGGCCGAAGGTCAGGACTCATCTGGGCATGCCAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
3UTR CCA 72 bp AATCAATCGAGATGGAACCGATTGCCACCCCTGGCATaGTGGGTGTCCACGCTGGCATGCCCAGATGAGTCC +
Preference number: 3 (lower is better)
Translates to: NQSRWNRLPPLA*WVSTLACPDES
Trigger: GGACTCATCTGGGCATGCCAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTTCCATCTCGATTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
3UTR TCA 72 bp TCTGAGGAACTCCTTCTGGAGACAAACTGGCCAAAGTaGGGAGCAGCTCCCGGCTACCCCTGTGAGTTTTCA +
Preference number: 3 (lower is better)
Translates to: SEELLLETNWPK*GAAPGYPCEFS
Trigger: TGAAAACTCACAGGGGTAGCCGGGAGCTGCTCCTCACTTTGGCCAGTTTGTCTCCAGAAGGAGTTCCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR TCA 90 bp CCCTGGCATGGTGGGTGTCCACGCTGGCATGCCCAGATGAGTCCTGACCTTCGGGCCTGGGTGAGGGCGTaGGGGCCGGCACTGAGGATG +
Preference number: 4 (lower is better)
Translates to: PWHGGCPRWHAQMSPDLRAWVRA*GPALRM
Trigger: CATCCTCAGTGCCGGCCCTCACGCCCTCACCCAGGC...CCGAAGGTCAGGACTCATCTGGGCATGCCAGCGTGGACACCCACCATGCCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR GCA 90 bp AACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTGGCATGCCCAGATGAGGGCAGCAGGGCCGGCTaGCTGTCACGCCCAGCACCG +
Preference number: 4 (lower is better)
Translates to: NRLPPLAWWVSTLACPDEGSRAG*LSRPAP
Trigger: CGGTGCTGGGCGTGACAGGCAGCCGGCCCTGCTGCC...CTCATCTGGGCATGCCAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp AGATGGAACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTGGCATGCCCAAGGCGCACACGGCCCTaGCACAGGCAGGCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: RWNRLPPLAWWVSTLACPRRTRP*HRQAGG
Trigger: GCCGCCAGCCTGCCTGTGCCAGGGCCGTGTGCGCCT...TGGGCATGCCAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTTCCATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR TCA 90 bp AACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTGGCATGCCCAGATGAGACAGCGCCAGCCCGTTaGGCACCAGCCCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: NRLPPLAWWVSTLACPDETAPAR*APALPG
Trigger: TCCTGGCAGGGCTGGTGCTCAACGGGCTGGCGCTGT...CTCATCTGGGCATGCCAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR TCA 90 bp CCCTGGCATGGTGGGTGTCCACGCTGGCATGCCCAGATGAGTCCTGACCTTCGGGCTGGCATGCCCAGATaGGTCCTGACCTTCGGCCCC +
Preference number: 4 (lower is better)
Translates to: PWHGGCPRWHAQMSPDLRAGMPR*VLTFGP
Trigger: GGGGCCGAAGGTCAGGACTCATCTGGGCATGCCAGC...CCGAAGGTCAGGACTCATCTGGGCATGCCAGCGTGGACACCCACCATGCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR GCA 90 bp ATCAATCGAGATGGAACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTGGGGCAGCAGGGCCGGCTaGCTGTCACGCCCAGCACCG +
Preference number: 4 (lower is better)
Translates to: INRDGTDCHPWHGGCPRWGSRAG*LSRPAP
Trigger: CGGTGCTGGGCGTGACAGGCAGCCGGCCCTGCTGCC...CCAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTTCCATCTCGATTGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR GCA 90 bp AACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTGGCATGCCCAGATGAGGGCTCACGCTCTCCGTaGTGGCCGAAGAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: NRLPPLAWWVSTLACPDEGSRSP*WPKRPR
Trigger: CCGAGGCCTCTTCGGCCAGCACGGAGAGCGTGAGCC...CTCATCTGGGCATGCCAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp AACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTGGCATGCCCAGATGAGTCACTGCGGTGGCATTaGGGACTGCCCCGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: NRLPPLAWWVSTLACPDESLRWH*GLPRPR
Trigger: CCTCGGCCGGGGCAGTCCCCAATGCCACCGCAGTGA...CTCATCTGGGCATGCCAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp CCCTGGCATGGTGGGTGTCCACGCTGGCATGCCCAGATGAGTCCTGACCTTCGGCCACGTCACCGCTGCTaGGCTCACGCTCTCCGTGCT +
Preference number: 4 (lower is better)
Translates to: PWHGGCPRWHAQMSPDLRPRHRC*AHALRA
Trigger: AGCACGGAGAGCGTGAGCCCAGCAGCGGTGACGTGG...CCGAAGGTCAGGACTCATCTGGGCATGCCAGCGTGGACACCCACCATGCCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR TCA 90 bp TCGAGATGGAACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTGGCATGCCGTGAGGGCCGGCACTaGGGATGTGATGACGGCCTG +
Preference number: 4 (lower is better)
Translates to: SRWNRLPPLAWWVSTLACREGRH*GCDDGL
Trigger: CAGGCCGTCATCACATCCTCAGTGCCGGCCCTCACG...GCATGCCAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTTCCATCTCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp AACAGCAAATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACTGGCACAGGCAGGCTaGCGGCAGCGGCGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: NSKSPAFRPPHPIGASGRLAQAG*RQRREP
Trigger: AGGCTCCCGCCGCTGCCGCCAGCCTGCCTGTGCCAG...TCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGATTTGCTGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp AATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACATTGCTAGGCGCACACGGCCCTaGCACAGGCAGGCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: NHRHSGHHIPSEPVADIARRTRP*HRQAGG
Trigger: GCCGCCAGCCTGCCTGTGCCAGGGCCGTGTGCGCCT...AGCAATGTCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp AATCAATCGAGATGGAACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTGCGCTGGCGACCCTGGTaGAGCAGACCCGGCCGCGAC +
Preference number: 4 (lower is better)
Translates to: NQSRWNRLPPLAWWVSTLRWRPW*SRPGRD
Trigger: GTCGCGGCCGGGTCTGCTCCACCAGGGTCGCCAGCG...CAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTTCCATCTCGATTGATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp AACAGCAAATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACGCTGGCGACCCTGGTaGAGCAGACCCGGCCGCGAC +
Preference number: 4 (lower is better)
Translates to: NSKSPAFRPPHPIGASGRRWRPW*SRPGRD
Trigger: GTCGCGGCCGGGTCTGCTCCACCAGGGTCGCCAGCG...TCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGATTTGCTGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp ATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACATTGCTAGCCCGCACGCGGCGCTaGCGACCCTGGTGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: ITGIQATTSHRSQWQTLLARTRR*RPWWSR
Trigger: TCTGCTCCACCAGGGTCGCCAGCGCCGCGTGCGGGC...TAGCAATGTCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp AATCAATCGAGATGGAACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTGGCCCGCACGCGGCGCTaGCGACCCTGGTGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: NQSRWNRLPPLAWWVSTLARTRR*RPWWSR
Trigger: TCTGCTCCACCAGGGTCGCCAGCGCCGCGTGCGGGC...CAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTTCCATCTCGATTGATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp AGATGGAACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTGGCATGCCCAGAGGCTCGTGTGGTGTaGCATGTCGGGCCACAGCGC +
Preference number: 4 (lower is better)
Translates to: RWNRLPPLAWWVSTLACPEARVV*HVGPQR
Trigger: GCGCTGTGGCCCGACATGCCACACCACACGAGCCTC...TGGGCATGCCAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTTCCATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp CCCTGGCATGGTGGGTGTCCACGCTGGCATGCCCAGATGAGTCCTGACCTTCGGACCACGAGGCTCGTGTaGTGTGGCATGTCGGGCCAC +
Preference number: 4 (lower is better)
Translates to: PWHGGCPRWHAQMSPDLRTTRLV*CGMSGH
Trigger: GTGGCCCGACATGCCACACCACACGAGCCTCGTGGT...CCGAAGGTCAGGACTCATCTGGGCATGCCAGCGTGGACACCCACCATGCCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR TCA 90 bp AACAGCAAATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGAGCCTGGGTGAGGGCGTaGGGGCCGGCACTGAGGATG +
Preference number: 4 (lower is better)
Translates to: NSKSPAFRPPHPIGASGRAWVRA*GPALRM
Trigger: CATCCTCAGTGCCGGCCCTCACGCCCTCACCCAGGC...TCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGATTTGCTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR GCA 90 bp AACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTGGCATGCCCAGATGAGGCTCTCAGCTCTGCATaGAGCCCGGACCTCGCCTTC +
Preference number: 4 (lower is better)
Translates to: NRLPPLAWWVSTLACPDEALSSA*SPDLAF
Trigger: GAAGGCGAGGTCCGGGCTGCATGCAGAGCTGAGAGC...CTCATCTGGGCATGCCAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377741.4
CDS-3UTR GCA 90 bp AACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTGGCATGCCCAGATGAGAGGAAGATGGCTCCGTaGACCGCCATCAGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: NRLPPLAWWVSTLACPDERKMAP*TAISAS
Trigger: GCTGGCGCTGATGGCGGTGCACGGAGCCATCTTCCT...CTCATCTGGGCATGCCAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR GCA 90 bp TCGAGATGGAACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTGGCATGCAGGAAGATGGCTCCGTaGACCGCCATCAGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: SRWNRLPPLAWWVSTLACRKMAP*TAISAS
Trigger: GCTGGCGCTGATGGCGGTGCACGGAGCCATCTTCCT...GCATGCCAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTTCCATCTCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR GCA 90 bp CCCTGGCATGGTGGGTGTCCACGCTGGCATGCCCAGATGAGTCCTGACCTTCGGGTGTCTTGGCCCGGGTaGGGCAGCAGAAGACGTACA +
Preference number: 4 (lower is better)
Translates to: PWHGGCPRWHAQMSPDLRVSWPG*GSRRRT
Trigger: TGTACGTCTTCTGCTGCCGCACCCGGGCCAAGACAC...CCGAAGGTCAGGACTCATCTGGGCATGCCAGCGTGGACACCCACCATGCCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR GCA 90 bp AACAGCAAATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGAACCGTGAGCAGGAGCTaGATGGCCCGCACGCGGCGC +
Preference number: 4 (lower is better)
Translates to: NSKSPAFRPPHPIGASGRTVSRS*MARTRR
Trigger: GCGCCGCGTGCGGGCCATGCAGCTCCTGCTCACGGT...TCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGATTTGCTGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp CCCTGGCATGGTGGGTGTCCACGCTGGCATGCCCAGATGAGTCCTGACCTTCGGTTCACCCGGGCAGGCTaGAGATGGGAGTCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PWHGGCPRWHAQMSPDLRFTRAG*RWESSA
Trigger: AGCTGAGGACTCCCATCTCCAGCCTGCCCGGGTGAA...CCGAAGGTCAGGACTCATCTGGGCATGCCAGCGTGGACACCCACCATGCCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp AACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTGGCATGCCCAGATGAGAGCCGGGCAAACAGGTaGAACAGGGGCACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: NRLPPLAWWVSTLACPDESRANR*NRGTSS
Trigger: GCTGGAGGTGCCCCTGTTCCACCTGTTTGCCCGGCT...CTCATCTGGGCATGCCAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp AACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTGGCATGCCCAGATGAGGCCCTGCCAGGAAGATaGCTCCGTGCACCGCCATCA +
Preference number: 4 (lower is better)
Translates to: NRLPPLAWWVSTLACPDEALPGR*LRAPPS
Trigger: TGATGGCGGTGCACGGAGCCATCTTCCTGGCAGGGC...CTCATCTGGGCATGCCAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp TCGAGATGGAACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTGGCATGCGCCCTGCCAGGAAGATaGCTCCGTGCACCGCCATCA +
Preference number: 4 (lower is better)
Translates to: SRWNRLPPLAWWVSTLACALPGR*LRAPPS
Trigger: TGATGGCGGTGCACGGAGCCATCTTCCTGGCAGGGC...GCATGCCAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTTCCATCTCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp AGACAAACTGGCCAAAGTGAGGAGCAGCTCCCGGCTACCCCTGTGAGTTTTCAGCTGGCACAGGCAGGCTaGCGGCAGCGGCGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: RQTGQSEEQLPATPVSFQLAQAG*RQRREP
Trigger: AGGCTCCCGCCGCTGCCGCCAGCCTGCCTGTGCCAG...CTGAAAACTCACAGGGGTAGCCGGGAGCTGCTCCTCACTTTGGCCAGTTTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp CAATCAATCGAGATGGAACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTAGCGCCACGGCCACTTaGCGGGCGTGGAAGGGCGTG +
Preference number: 4 (lower is better)
Translates to: QSIEMEPIATPGMVGVHASATAT*RAWKGV
Trigger: CACGCCCTTCCACGCCCGCCAAGTGGCCGTGGCGCT...AGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTTCCATCTCGATTGATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp AACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTGGCATGCCCAGATGAGCCTCGGACGGTGGCCTaGAAGCCACTGGTGACGAAG +
Preference number: 4 (lower is better)
Translates to: NRLPPLAWWVSTLACPDEPRTVA*KPLVTK
Trigger: CTTCGTCACCAGTGGCTTCCAGGCCACCGTCCGAGG...CTCATCTGGGCATGCCAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR TCA 90 bp CCCTGGCATGGTGGGTGTCCACGCTGGCATGCCCAGATGAGTCCTGACCTTCGGGATGGTGTAGATGACTaGGGGTGTCTTGGCCCGGGT +
Preference number: 4 (lower is better)
Translates to: PWHGGCPRWHAQMSPDLRDGVDD*GCLGPG
Trigger: ACCCGGGCCAAGACACCCTCAGTCATCTACACCATC...CCGAAGGTCAGGACTCATCTGGGCATGCCAGCGTGGACACCCACCATGCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR TCA 90 bp CCCTGGCATGGTGGGTGTCCACGCTGGCATGCCCAGATGAGTCCTGACCTTCGGCCTGGAAGCCACTGGTaGCGAAGCAGTAGACGATGG +
Preference number: 4 (lower is better)
Translates to: PWHGGCPRWHAQMSPDLRPGSHW*RSSRRW
Trigger: CCATCGTCTACTGCTTCGTCACCAGTGGCTTCCAGG...CCGAAGGTCAGGACTCATCTGGGCATGCCAGCGTGGACACCCACCATGCCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR TCA 90 bp CCCTGGCATGGTGGGTGTCCACGCTGGCATGCCCAGATGAGTCCTGACCTTCGGACAAACTGGCCAAAGTaGGGAGCAGCTCCCGGCTAC +
Preference number: 4 (lower is better)
Translates to: PWHGGCPRWHAQMSPDLRTNWPK*GAAPGY
Trigger: GTAGCCGGGAGCTGCTCCTCACTTTGGCCAGTTTGT...CCGAAGGTCAGGACTCATCTGGGCATGCCAGCGTGGACACCCACCATGCCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR GCA 90 bp ATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACATTGCTAGGCTCACGCTCTCCGTaGTGGCCGAAGAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: ITGIQATTSHRSQWQTLLGSRSP*WPKRPR
Trigger: CCGAGGCCTCTTCGGCCAGCACGGAGAGCGTGAGCC...TAGCAATGTCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp AATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACATTGCTTCACTGCGGTGGCATTaGGGACTGCCCCGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: NHRHSGHHIPSEPVADIASLRWH*GLPRPR
Trigger: CCTCGGCCGGGGCAGTCCCCAATGCCACCGCAGTGA...AGCAATGTCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp ATCAATCGAGATGGAACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTGGCGCCAGCCACAGGCCTaGGAAGGTGCCATGCAGCTC +
Preference number: 4 (lower is better)
Translates to: INRDGTDCHPWHGGCPRWRQPQA*EGAMQL
Trigger: GAGCTGCATGGCACCTTCCCAGGCCTGTGGCTGGCG...CCAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTTCCATCTCGATTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp ATCAATCGAGATGGAACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTGGAGCGCAGGCAGCCCCTaGCGCCGTAGTACACAGCGA +
Preference number: 4 (lower is better)
Translates to: INRDGTDCHPWHGGCPRWSAGSP*RRSTQR
Trigger: TCGCTGTGTACTACGGCGCCAGGGGCTGCCTGCGCT...CCAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTTCCATCTCGATTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp CGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACATTGCTAATCAAAGCGCCACGGCCACTTaGCGGGCGTGGAAGGGCGTG +
Preference number: 4 (lower is better)
Translates to: RHSGHHIPSEPVADIANQSATAT*RAWKGV
Trigger: CACGCCCTTCCACGCCCGCCAAGTGGCCGTGGCGCT...TTGATTAGCAATGTCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp ATCAATCGAGATGGAACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTGGTCACGCTCTCCGTGCTaGCCGAAGAGGCCTCGGACG +
Preference number: 4 (lower is better)
Translates to: INRDGTDCHPWHGGCPRWSRSPC*PKRPRT
Trigger: CGTCCGAGGCCTCTTCGGCCAGCACGGAGAGCGTGA...CCAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTTCCATCTCGATTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp ATCAATCGAGATGGAACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTGGCCACCCCTGGCATGGTaGGTGTCCACGCTGGCATGC +
Preference number: 4 (lower is better)
Translates to: INRDGTDCHPWHGGCPRWPPLAW*VSTLAC
Trigger: GCATGCCAGCGTGGACACCCACCATGCCAGGGGTGG...CCAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTTCCATCTCGATTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR TCA 90 bp ATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACATTGCTAGAGACACAGAGGGCATaGCGGCAGCCAGCACACCCC +
Preference number: 4 (lower is better)
Translates to: ITGIQATTSHRSQWQTLLETQRA*RQPAHP
Trigger: GGGGTGTGCTGGCTGCCGTCATGCCCTCTGTGTCTC...TAGCAATGTCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR TCA 90 bp AGACAAACTGGCCAAAGTGAGGAGCAGCTCCCGGCTACCCCTGTGAGTTTTCAGACAGCGCCAGCCCGTTaGGCACCAGCCCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: RQTGQSEEQLPATPVSFQTAPAR*APALPG
Trigger: TCCTGGCAGGGCTGGTGCTCAACGGGCTGGCGCTGT...CTGAAAACTCACAGGGGTAGCCGGGAGCTGCTCCTCACTTTGGCCAGTTTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR TCA 90 bp AGCAAATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACATCGTGAGGGCCGGCACTaGGGATGTGATGACGGCCTG +
Preference number: 4 (lower is better)
Translates to: SKSPAFRPPHPIGASGRHREGRH*GCDDGL
Trigger: CAGGCCGTCATCACATCCTCAGTGCCGGCCCTCACG...ATGTCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGATTTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR TCA 90 bp AACAGCAAATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGAGCTGGCATGCCCAGATaGGTCCTGACCTTCGGCCCC +
Preference number: 4 (lower is better)
Translates to: NSKSPAFRPPHPIGASGRAGMPR*VLTFGP
Trigger: GGGGCCGAAGGTCAGGACTCATCTGGGCATGCCAGC...TCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGATTTGCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR GCA 90 bp AATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACATTGCTCCTGGGAAGGTGCCATaGAGCTCCTCGTCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: NHRHSGHHIPSEPVADIAPGKVP*SSSSSR
Trigger: CCGGCTGGACGAGGAGCTGCATGGCACCTTCCCAGG...AGCAATGTCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR GCA 90 bp AGCAAATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACATACCCGGCCGCGACAGTaGACACATGATGCGGCCGGT +
Preference number: 4 (lower is better)
Translates to: SKSPAFRPPHPIGASGRHTRPRQ*THDAAG
Trigger: ACCGGCCGCATCATGTGTGCACTGTCGCGGCCGGGT...ATGTCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGATTTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp ATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACATTGCTAAGCGCAGGCAGCCCCTaGCGCCGTAGTACACAGCGA +
Preference number: 4 (lower is better)
Translates to: ITGIQATTSHRSQWQTLLSAGSP*RRSTQR
Trigger: TCGCTGTGTACTACGGCGCCAGGGGCTGCCTGCGCT...TAGCAATGTCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp AACAGCAAATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGAGCCACTTGGCGGGCGTaGAAGGGCGTGAAGCAGACG +
Preference number: 4 (lower is better)
Translates to: NSKSPAFRPPHPIGASGRATWRA*KGVKQT
Trigger: CGTCTGCTTCACGCCCTTCCACGCCCGCCAAGTGGC...TCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGATTTGCTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp AACAGCAAATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGAGAGGCTCGTGTGGTGTaGCATGTCGGGCCACAGCGC +
Preference number: 4 (lower is better)
Translates to: NSKSPAFRPPHPIGASGREARVV*HVGPQR
Trigger: GCGCTGTGGCCCGACATGCCACACCACACGAGCCTC...TCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGATTTGCTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp AATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACATTGCTCCACGTCACCGCTGCTaGGCTCACGCTCTCCGTGCT +
Preference number: 4 (lower is better)
Translates to: NHRHSGHHIPSEPVADIAPRHRC*AHALRA
Trigger: AGCACGGAGAGCGTGAGCCCAGCAGCGGTGACGTGG...AGCAATGTCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp ATCAATCGAGATGGAACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTGGTTGCCACCCCTGGCATaGTGGGTGTCCACGCTGGCA +
Preference number: 4 (lower is better)
Translates to: INRDGTDCHPWHGGCPRWLPPLA*WVSTLA
Trigger: TGCCAGCGTGGACACCCACCATGCCAGGGGTGGCAA...CCAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTTCCATCTCGATTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR TCA 90 bp AGCAAATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACATAGCTCCTGTGCATGCTaGCCACGTCACCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SKSPAFRPPHPIGASGRHSSCAC*PRHRCW
Trigger: CCAGCAGCGGTGACGTGGTCAGCATGCACAGGAGCT...ATGTCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGATTTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR GCA 90 bp AATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACATTGCTCTCAGCTCTCAGCTCTaGATGCAGCCCGGACCTCGC +
Preference number: 4 (lower is better)
Translates to: NHRHSGHHIPSEPVADIALSSQL*MQPGPR
Trigger: GCGAGGTCCGGGCTGCATGCAGAGCTGAGAGCTGAG...AGCAATGTCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377741.4
CDS-3UTR GCA 90 bp ATCAATCGAGATGGAACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTGGCCGCACTGTTGTCACTaGGGTGGCATTGGGGACTGC +
Preference number: 4 (lower is better)
Translates to: INRDGTDCHPWHGGCPRWPHCCH*GGIGDC
Trigger: GCAGTCCCCAATGCCACCGCAGTGACAACAGTGCGG...CCAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTTCCATCTCGATTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR GCA 90 bp ATCAATCGAGATGGAACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTGGCCCTTGGAGCTCCTGTaGATGCTGACCACGTCACCG +
Preference number: 4 (lower is better)
Translates to: INRDGTDCHPWHGGCPRWPLELL*MLTTSP
Trigger: CGGTGACGTGGTCAGCATGCACAGGAGCTCCAAGGG...CCAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTTCCATCTCGATTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp AACAGCAAATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACTGTTGTCACTGCGGTaGCATTGGGGACTGCCCCGG +
Preference number: 4 (lower is better)
Translates to: NSKSPAFRPPHPIGASGRLLSLR*HWGLPR
Trigger: CCGGGGCAGTCCCCAATGCCACCGCAGTGACAACAG...TCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGATTTGCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp ATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACATTGCTAGCACCTCCAGCCCGCTaGCATTGGTCCGCACTGTTG +
Preference number: 4 (lower is better)
Translates to: ITGIQATTSHRSQWQTLLAPPAR*HWSALL
Trigger: CAACAGTGCGGACCAATGCCAGCGGGCTGGAGGTGC...TAGCAATGTCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp CGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACATTGCTAATCAACGCCAGCCACAGGCCTaGGAAGGTGCCATGCAGCTC +
Preference number: 4 (lower is better)
Translates to: RHSGHHIPSEPVADIANQRQPQA*EGAMQL
Trigger: GAGCTGCATGGCACCTTCCCAGGCCTGTGGCTGGCG...TTGATTAGCAATGTCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp AACAGCAAATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGAACACAGCGAAGCGCGTaGGCAGGGACAGCCCTACCA +
Preference number: 4 (lower is better)
Translates to: NSKSPAFRPPHPIGASGRTQRSA*AGTALP
Trigger: TGGTAGGGCTGTCCCTGCCCACGCGCTTCGCTGTGT...TCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGATTTGCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp ATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACATTGCTAACACAGCGAAGCGCGTaGGCAGGGACAGCCCTACCA +
Preference number: 4 (lower is better)
Translates to: ITGIQATTSHRSQWQTLLTQRSA*AGTALP
Trigger: TGGTAGGGCTGTCCCTGCCCACGCGCTTCGCTGTGT...TAGCAATGTCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp AGCAAATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACATACCACGAGGCTCGTGTaGTGTGGCATGTCGGGCCAC +
Preference number: 4 (lower is better)
Translates to: SKSPAFRPPHPIGASGRHTTRLV*CGMSGH
Trigger: GTGGCCCGACATGCCACACCACACGAGCCTCGTGGT...ATGTCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGATTTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp AATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACATTGCTCCTCGGACGGTGGCCTaGAAGCCACTGGTGACGAAG +
Preference number: 4 (lower is better)
Translates to: NHRHSGHHIPSEPVADIAPRTVA*KPLVTK
Trigger: CTTCGTCACCAGTGGCTTCCAGGCCACCGTCCGAGG...AGCAATGTCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp AGACAAACTGGCCAAAGTGAGGAGCAGCTCCCGGCTACCCCTGTGAGTTTTCAGCCACCCCTGGCATGGTaGGTGTCCACGCTGGCATGC +
Preference number: 4 (lower is better)
Translates to: RQTGQSEEQLPATPVSFQPPLAW*VSTLAC
Trigger: GCATGCCAGCGTGGACACCCACCATGCCAGGGGTGG...CTGAAAACTCACAGGGGTAGCCGGGAGCTGCTCCTCACTTTGGCCAGTTTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp AGCAAATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACATTTGCCACCCCTGGCATaGTGGGTGTCCACGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SKSPAFRPPHPIGASGRHLPPLA*WVSTLA
Trigger: TGCCAGCGTGGACACCCACCATGCCAGGGGTGGCAA...ATGTCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGATTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp CAATCAATCGAGATGGAACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTACCGATTGCCACCCCTaGCATGGTGGGTGTCCACGC +
Preference number: 4 (lower is better)
Translates to: QSIEMEPIATPGMVGVHATDCHP*HGGCPR
Trigger: GCGTGGACACCCACCATGCCAGGGGTGGCAATCGGT...AGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTTCCATCTCGATTGATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR TCA 90 bp CCCTGTGAGTTTTCAGTGGACGTGCTATACCCCAGGAACAGCAAATCACCGGCAGAGACACAGAGGGCATaGCGGCAGCCAGCACACCCC +
Preference number: 4 (lower is better)
Translates to: PCEFSVDVLYPRNSKSPAETQRA*RQPAHP
Trigger: GGGGTGTGCTGGCTGCCGTCATGCCCTCTGTGTCTC...TGCCGGTGATTTGCTGTTCCTGGGGTATAGCACGTCCACTGAAAACTCACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR TCA 90 bp AGACAAACTGGCCAAAGTGAGGAGCAGCTCCCGGCTACCCCTGTGAGTTTTCAGAGCTCCTGTGCATGCTaGCCACGTCACCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RQTGQSEEQLPATPVSFQSSCAC*PRHRCW
Trigger: CCAGCAGCGGTGACGTGGTCAGCATGCACAGGAGCT...CTGAAAACTCACAGGGGTAGCCGGGAGCTGCTCCTCACTTTGGCCAGTTTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR TCA 90 bp ATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACATTGCTAGATGTGATGACGGCCTaGGCCCTTGGAGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: ITGIQATTSHRSQWQTLLDVMTA*ALGAPV
Trigger: CACAGGAGCTCCAAGGGCTCAGGCCGTCATCACATC...TAGCAATGTCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR TCA 90 bp CAATCAATCGAGATGGAACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTGATGTGATGACGGCCTaGGCCCTTGGAGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: QSIEMEPIATPGMVGVHADVMTA*ALGAPV
Trigger: CACAGGAGCTCCAAGGGCTCAGGCCGTCATCACATC...AGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTTCCATCTCGATTGATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR GCA 90 bp AATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACATTGCTCCGCACTGTTGTCACTaGGGTGGCATTGGGGACTGC +
Preference number: 4 (lower is better)
Translates to: NHRHSGHHIPSEPVADIAPHCCH*GGIGDC
Trigger: GCAGTCCCCAATGCCACCGCAGTGACAACAGTGCGG...AGCAATGTCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR GCA 90 bp AATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACATTGCTGTGTCTTGGCCCGGGTaGGGCAGCAGAAGACGTACA +
Preference number: 4 (lower is better)
Translates to: NHRHSGHHIPSEPVADIAVSWPG*GSRRRT
Trigger: TGTACGTCTTCTGCTGCCGCACCCGGGCCAAGACAC...AGCAATGTCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR GCA 90 bp GTGAGTTTTCAGTGGACGTGCTATACCCCAGGAACAGCAAATCACCGGCATTCAACCGTGAGCAGGAGCTaGATGGCCCGCACGCGGCGC +
Preference number: 4 (lower is better)
Translates to: VSFQWTCYTPGTANHRHSTVSRS*MARTRR
Trigger: GCGCCGCGTGCGGGCCATGCAGCTCCTGCTCACGGT...TGAATGCCGGTGATTTGCTGTTCCTGGGGTATAGCACGTCCACTGAAAACTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR GCA 90 bp CAATCAATCGAGATGGAACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTCCCTTGGAGCTCCTGTaGATGCTGACCACGTCACCG +
Preference number: 4 (lower is better)
Translates to: QSIEMEPIATPGMVGVHAPLELL*MLTTSP
Trigger: CGGTGACGTGGTCAGCATGCACAGGAGCTCCAAGGG...AGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTTCCATCTCGATTGATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp AATCAATCGAGATGGAACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTGCCAGCCCGCTGGCATTaGTCCGCACTGTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: NQSRWNRLPPLAWWVSTLPARWH*SALLSL
Trigger: CAGTGACAACAGTGCGGACCAATGCCAGCGGGCTGG...CAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTTCCATCTCGATTGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp AACAGCAAATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACCAGCCCGCTGGCATTaGTCCGCACTGTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: NSKSPAFRPPHPIGASGRPARWH*SALLSL
Trigger: CAGTGACAACAGTGCGGACCAATGCCAGCGGGCTGG...TCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGATTTGCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp AGACAAACTGGCCAAAGTGAGGAGCAGCTCCCGGCTACCCCTGTGAGTTTTCAGAGCCGGGCAAACAGGTaGAACAGGGGCACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RQTGQSEEQLPATPVSFQSRANR*NRGTSS
Trigger: GCTGGAGGTGCCCCTGTTCCACCTGTTTGCCCGGCT...CTGAAAACTCACAGGGGTAGCCGGGAGCTGCTCCTCACTTTGGCCAGTTTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR TCA 90 bp CAATCAATCGAGATGGAACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTCCTGGAAGCCACTGGTaGCGAAGCAGTAGACGATGG +
Preference number: 4 (lower is better)
Translates to: QSIEMEPIATPGMVGVHAPGSHW*RSSRRW
Trigger: CCATCGTCTACTGCTTCGTCACCAGTGGCTTCCAGG...AGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTTCCATCTCGATTGATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR TCA 90 bp CCCTGTGAGTTTTCAGTGGACGTGCTATACCCCAGGAACAGCAAATCACCGGCACTGGCAGAGCCCTGCTaGCTAAGCCTCGGGCCCATT +
Preference number: 4 (lower is better)
Translates to: PCEFSVDVLYPRNSKSPALAEPC*LSLGPI
Trigger: AATGGGCCCGAGGCTTAGTCAGCAGGGCTCTGCCAG...TGCCGGTGATTTGCTGTTCCTGGGGTATAGCACGTCCACTGAAAACTCACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR TCA 90 bp CAATCAATCGAGATGGAACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTTCCCGGCTACCCCTGTaGGTTTTCAGTGGACGTGCT +
Preference number: 4 (lower is better)
Translates to: QSIEMEPIATPGMVGVHASRLPL*VFSGRA
Trigger: AGCACGTCCACTGAAAACTCACAGGGGTAGCCGGGA...AGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTTCCATCTCGATTGATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR TCA 90 bp AGCAAATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACATTCCCGGCTACCCCTGTaGGTTTTCAGTGGACGTGCT +
Preference number: 4 (lower is better)
Translates to: SKSPAFRPPHPIGASGRHSRLPL*VFSGRA
Trigger: AGCACGTCCACTGAAAACTCACAGGGGTAGCCGGGA...ATGTCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGATTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR TCA 90 bp CAATCAATCGAGATGGAACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTACAAACTGGCCAAAGTaGGGAGCAGCTCCCGGCTAC +
Preference number: 4 (lower is better)
Translates to: QSIEMEPIATPGMVGVHATNWPK*GAAPGY
Trigger: GTAGCCGGGAGCTGCTCCTCACTTTGGCCAGTTTGT...AGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTTCCATCTCGATTGATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR GCA 90 bp CGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACATTGCTAATCAAACAGGCCTGGGAAGGTaGCATGCAGCTCCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: RHSGHHIPSEPVADIANQTGLGR*HAAPRP
Trigger: TGGACGAGGAGCTGCATGGCACCTTCCCAGGCCTGT...TTGATTAGCAATGTCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR GCA 90 bp AGACAAACTGGCCAAAGTGAGGAGCAGCTCCCGGCTACCCCTGTGAGTTTTCAGACAGGCCTGGGAAGGTaGCATGCAGCTCCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: RQTGQSEEQLPATPVSFQTGLGR*HAAPRP
Trigger: TGGACGAGGAGCTGCATGGCACCTTCCCAGGCCTGT...CTGAAAACTCACAGGGGTAGCCGGGAGCTGCTCCTCACTTTGGCCAGTTTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp CGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACATTGCTAATCAATTCACCCGGGCAGGCTaGAGATGGGAGTCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: RHSGHHIPSEPVADIANQFTRAG*RWESSA
Trigger: AGCTGAGGACTCCCATCTCCAGCCTGCCCGGGTGAA...TTGATTAGCAATGTCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp CCCTGTGAGTTTTCAGTGGACGTGCTATACCCCAGGAACAGCAAATCACCGGCAGCACCTCCAGCCCGCTaGCATTGGTCCGCACTGTTG +
Preference number: 4 (lower is better)
Translates to: PCEFSVDVLYPRNSKSPAAPPAR*HWSALL
Trigger: CAACAGTGCGGACCAATGCCAGCGGGCTGGAGGTGC...TGCCGGTGATTTGCTGTTCCTGGGGTATAGCACGTCCACTGAAAACTCACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp AGATGGAACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTGGCATGCCCATCCCATCGGAGCCAGTaGCAGACATTGCTAATCAAC +
Preference number: 4 (lower is better)
Translates to: RWNRLPPLAWWVSTLACPSHRSQ*QTLLIN
Trigger: GTTGATTAGCAATGTCTGCCACTGGCTCCGATGGGA...TGGGCATGCCAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTTCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp AACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTGGCATGCCCAGATGAGCCTGTGAGTTTTCAGTaGACGTGCTATACCCCAGGA +
Preference number: 4 (lower is better)
Translates to: NRLPPLAWWVSTLACPDEPVSFQ*TCYTPG
Trigger: TCCTGGGGTATAGCACGTCCACTGAAAACTCACAGG...CTCATCTGGGCATGCCAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
3UTR CAA 72 bp TGGGTAGCCATCACCAATCAATCGAGATGGAACCGATaGCCACCCCTGGCATGGTGGGTGTCCACGCTGGCA +
Preference number: 4 (lower is better)
Translates to: WVAITNQSRWNR*PPLAWWVSTLA
Trigger: TGCCAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTTCCATCTCGATTGATTGGTGATGGCTACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR GCA 90 bp GTGAGTTTTCAGTGGACGTGCTATACCCCAGGAACAGCAAATCACCGGCATTCAACCCGGCCGCGACAGTaGACACATGATGCGGCCGGT +
Preference number: 4 (lower is better)
Translates to: VSFQWTCYTPGTANHRHSTRPRQ*THDAAG
Trigger: ACCGGCCGCATCATGTGTGCACTGTCGCGGCCGGGT...TGAATGCCGGTGATTTGCTGTTCCTGGGGTATAGCACGTCCACTGAAAACTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp GTGAGTTTTCAGTGGACGTGCTATACCCCAGGAACAGCAAATCACCGGCATTCAGCCACTTGGCGGGCGTaGAAGGGCGTGAAGCAGACG +
Preference number: 4 (lower is better)
Translates to: VSFQWTCYTPGTANHRHSATWRA*KGVKQT
Trigger: CGTCTGCTTCACGCCCTTCCACGCCCGCCAAGTGGC...TGAATGCCGGTGATTTGCTGTTCCTGGGGTATAGCACGTCCACTGAAAACTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp GTGAGTTTTCAGTGGACGTGCTATACCCCAGGAACAGCAAATCACCGGCATTCATCACGCTCTCCGTGCTaGCCGAAGAGGCCTCGGACG +
Preference number: 4 (lower is better)
Translates to: VSFQWTCYTPGTANHRHSSRSPC*PKRPRT
Trigger: CGTCCGAGGCCTCTTCGGCCAGCACGGAGAGCGTGA...TGAATGCCGGTGATTTGCTGTTCCTGGGGTATAGCACGTCCACTGAAAACTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR TCA 90 bp GTGAGTTTTCAGTGGACGTGCTATACCCCAGGAACAGCAAATCACCGGCATTCACTGGCAGAGCCCTGCTaGCTAAGCCTCGGGCCCATT +
Preference number: 4 (lower is better)
Translates to: VSFQWTCYTPGTANHRHSLAEPC*LSLGPI
Trigger: AATGGGCCCGAGGCTTAGTCAGCAGGGCTCTGCCAG...TGAATGCCGGTGATTTGCTGTTCCTGGGGTATAGCACGTCCACTGAAAACTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR TCA 90 bp AGACAAACTGGCCAAAGTGAGGAGCAGCTCCCGGCTACCCCTGTGAGTTTTCAGTGGAGCAGTGCATGTTaGGGAAGTAACCGAGGACGT +
Preference number: 4 (lower is better)
Translates to: RQTGQSEEQLPATPVSFQWSSAC*GSNRGR
Trigger: ACGTCCTCGGTTACTTCCTCAACATGCACTGCTCCA...CTGAAAACTCACAGGGGTAGCCGGGAGCTGCTCCTCACTTTGGCCAGTTTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp AGCAAATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACATTCCCATCGGAGCCAGTaGCAGACATTGCTAATCAAC +
Preference number: 4 (lower is better)
Translates to: SKSPAFRPPHPIGASGRHSHRSQ*QTLLIN
Trigger: GTTGATTAGCAATGTCTGCCACTGGCTCCGATGGGA...ATGTCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGATTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp ATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACATTGCTACCTGTGAGTTTTCAGTaGACGTGCTATACCCCAGGA +
Preference number: 4 (lower is better)
Translates to: ITGIQATTSHRSQWQTLLPVSFQ*TCYTPG
Trigger: TCCTGGGGTATAGCACGTCCACTGAAAACTCACAGG...TAGCAATGTCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR GCA 90 bp ATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACATTGCTAAGTTTTCAGTGGACGTaGTATACCCCAGGAACAGCA +
Preference number: 4 (lower is better)
Translates to: ITGIQATTSHRSQWQTLLSFQWT*YTPGTA
Trigger: TGCTGTTCCTGGGGTATAGCACGTCCACTGAAAACT...TAGCAATGTCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR GCA 90 bp AACAGCAAATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGAAGTTTTCAGTGGACGTaGTATACCCCAGGAACAGCA +
Preference number: 4 (lower is better)
Translates to: NSKSPAFRPPHPIGASGRSFQWT*YTPGTA
Trigger: TGCTGTTCCTGGGGTATAGCACGTCCACTGAAAACT...TCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGATTTGCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp AACAGCAAATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACTGAGGAACTCCTTCTaGAGACAAACTGGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: NSKSPAFRPPHPIGASGRLRNSF*RQTGQS
Trigger: ACTTTGGCCAGTTTGTCTCCAGAAGGAGTTCCTCAG...TCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGATTTGCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CCA 90 bp ATCAATCGAGATGGAACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTGGCATCCTTCTAATCAATaGAATCCACTGTGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: INRDGTDCHPWHGGCPRWHPSNQ*NPLCPF
Trigger: AAAAGGGCACAGTGGATTCCATTGATTAGAAGGATG...CCAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTTCCATCTCGATTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377741.4
CDS-3UTR CCA 90 bp GTGAGTTTTCAGTGGACGTGCTATACCCCAGGAACAGCAAATCACCGGCATTCACTGAGGAACTCCTTCTaGAGACAAACTGGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: VSFQWTCYTPGTANHRHSLRNSF*RQTGQS
Trigger: ACTTTGGCCAGTTTGTCTCCAGAAGGAGTTCCTCAG...TGAATGCCGGTGATTTGCTGTTCCTGGGGTATAGCACGTCCACTGAAAACTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS TCA 90 bp CACGGCAGCAGGGCCGGCTGCCTGTCACGCCCAGCACCGACAGGGTaGCGGCACCGGCGGCCAGCCACACGAAGGCGCACACGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: HGSRAGCLSRPAPTG*RHRRPATRRRTRPW
Trigger: CCAGGGCCGTGTGCGCCTTCGTGTGGCTGGCCGCCGGTGCCGTCACCCTGTCGGTGCTGGGCGTGACAGGCAGCCGGCCCTGCTGCCGTG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS CCA 90 bp ACCGTGAGCAGGAGCTGCATGGCCCGCACGCGGCGCTGGCGACCCTaGTGGAGCAGACCCGGCCGCGACAGTGCACACATGATGCGGCCG +
Preference number: 5 (lower is better)
Translates to: TVSRSCMARTRRWRP*WSRPGRDSAHMMRP
Trigger: CGGCCGCATCATGTGTGCACTGTCGCGGCCGGGTCTGCTCCACCAGGGTCGCCAGCGCCGCGTGCGGGCCATGCAGCTCCTGCTCACGGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS CCA 90 bp CAGCCAGCACACCCCAGGCCGCGCTTCACCCGGGCAGGCTGGAGATaGGAGTCCTCAGCTCTCAGCTCTGCATGCAGCCCGGACCTCGCC +
Preference number: 5 (lower is better)
Translates to: QPAHPRPRFTRAGWR*ESSALSSACSPDLA
Trigger: GGCGAGGTCCGGGCTGCATGCAGAGCTGAGAGCTGAGGACTCCCATCTCCAGCCTGCCCGGGTGAAGCGCGGCCTGGGGTGTGCTGGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377741.4
CDS GCA 90 bp CCGTGCACCGCCATCAGCGCCAGCCACAGGCCTGGGAAGGTGCCATaGAGCTCCTCGTCCAGCCGGGCAAACAGGTGGAACAGGGGCACC +
Preference number: 5 (lower is better)
Translates to: PCTAISASHRPGKVP*SSSSSRANRWNRGT
Trigger: GGTGCCCCTGTTCCACCTGTTTGCCCGGCTGGACGAGGAGCTGCATGGCACCTTCCCAGGCCTGTGGCTGGCGCTGATGGCGGTGCACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS GCA 90 bp CACGCGGCGCTGGCGACCCTGGTGGAGCAGACCCGGCCGCGACAGTaGACACATGATGCGGCCGGTAAACACGCTGATGACCAGCAGGGG +
Preference number: 5 (lower is better)
Translates to: HAALATLVEQTRPRQ*THDAAGKHADDQQG
Trigger: CCCCTGCTGGTCATCAGCGTGTTTACCGGCCGCATCATGTGTGCACTGTCGCGGCCGGGTCTGCTCCACCAGGGTCGCCAGCGCCGCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS CCA 90 bp ATGATGAGCACCGTGAGCAGGAGCTGCATGGCCCGCACGCGGCGCTaGCGACCCTGGTGGAGCAGACCCGGCCGCGACAGTGCACACATG +
Preference number: 5 (lower is better)
Translates to: MMSTVSRSCMARTRR*RPWWSRPGRDSAHM
Trigger: CATGTGTGCACTGTCGCGGCCGGGTCTGCTCCACCAGGGTCGCCAGCGCCGCGTGCGGGCCATGCAGCTCCTGCTCACGGTGCTCATCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS CCA 90 bp GCTGAGGGTCACGGCCACGTGGTAGACCACGAGGCTCGTGTGGTGTaGCATGTCGGGCCACAGCGCCACGGCCACTTGGCGGGCGTGGAA +
Preference number: 5 (lower is better)
Translates to: AEGHGHVVDHEARVV*HVGPQRHGHLAGVE
Trigger: TTCCACGCCCGCCAAGTGGCCGTGGCGCTGTGGCCCGACATGCCACACCACACGAGCCTCGTGGTCTACCACGTGGCCGTGACCCTCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS TCA 90 bp CCCCTGGCATGGTGGGTGTCCACGCTGGCATGCCCAGATGAGTCCTaGCCTTCGGCCCCTGGCAGAGCCCTGCTGACTAAGCCTCGGGCC +
Preference number: 5 (lower is better)
Translates to: PLAWWVSTLACPDES*PSAPGRALLTKPRA
Trigger: GGCCCGAGGCTTAGTCAGCAGGGCTCTGCCAGGGGCCGAAGGTCAGGACTCATCTGGGCATGCCAGCGTGGACACCCACCATGCCAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS GCA 90 bp TGGCTCCGTGCACCGCCATCAGCGCCAGCCACAGGCCTGGGAAGGTaGCATGCAGCTCCTCGTCCAGCCGGGCAAACAGGTGGAACAGGG +
Preference number: 5 (lower is better)
Translates to: WLRAPPSAPATGLGR*HAAPRPAGQTGGTG
Trigger: CCCTGTTCCACCTGTTTGCCCGGCTGGACGAGGAGCTGCATGGCACCTTCCCAGGCCTGTGGCTGGCGCTGATGGCGGTGCACGGAGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS GCA 90 bp CTGTGCATGCTGACCACGTCACCGCTGCTGGGCTCACGCTCTCCGTaGTGGCCGAAGAGGCCTCGGACGGTGGCCTGGAAGCCACTGGTG +
Preference number: 5 (lower is better)
Translates to: LCMLTTSPLLGSRSP*WPKRPRTVAWKPLV
Trigger: CACCAGTGGCTTCCAGGCCACCGTCCGAGGCCTCTTCGGCCAGCACGGAGAGCGTGAGCCCAGCAGCGGTGACGTGGTCAGCATGCACAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS CCA 90 bp GGAAGTAACCGAGGACGTGCGGGAAGGCACAGCGCAGGCAGCCCCTaGCGCCGTAGTACACAGCGAAGCGCGTGGGCAGGGACAGCCCTA +
Preference number: 5 (lower is better)
Translates to: GSNRGRAGRHSAGSP*RRSTQRSAWAGTAL
Trigger: TAGGGCTGTCCCTGCCCACGCGCTTCGCTGTGTACTACGGCGCCAGGGGCTGCCTGCGCTGTGCCTTCCCGCACGTCCTCGGTTACTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS CCA 90 bp TGCATGCTGACCACGTCACCGCTGCTGGGCTCACGCTCTCCGTGCTaGCCGAAGAGGCCTCGGACGGTGGCCTGGAAGCCACTGGTGACG +
Preference number: 5 (lower is better)
Translates to: CMLTTSPLLGSRSPC*PKRPRTVAWKPLVT
Trigger: CGTCACCAGTGGCTTCCAGGCCACCGTCCGAGGCCTCTTCGGCCAGCACGGAGAGCGTGAGCCCAGCAGCGGTGACGTGGTCAGCATGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS TCA 90 bp CATGCCCAGATGAGTCCTGACCTTCGGCCCCTGGCAGAGCCCTGCTaGCTAAGCCTCGGGCCCATTAGCCAGGGCCTGGGTGAGGGCGTG +
Preference number: 5 (lower is better)
Translates to: HAQMSPDLRPLAEPC*LSLGPISQGLGEGV
Trigger: CACGCCCTCACCCAGGCCCTGGCTAATGGGCCCGAGGCTTAGTCAGCAGGGCTCTGCCAGGGGCCGAAGGTCAGGACTCATCTGGGCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS CCA 90 bp CAGGAAGATGGCTCCGTGCACCGCCATCAGCGCCAGCCACAGGCCTaGGAAGGTGCCATGCAGCTCCTCGTCCAGCCGGGCAAACAGGTG +
Preference number: 5 (lower is better)
Translates to: QEDGSVHRHQRQPQA*EGAMQLLVQPGKQV
Trigger: CACCTGTTTGCCCGGCTGGACGAGGAGCTGCATGGCACCTTCCCAGGCCTGTGGCTGGCGCTGATGGCGGTGCACGGAGCCATCTTCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS TCA 90 bp CTGGGTGAGGGCGTGAGGGCCGGCACTGAGGATGTGATGACGGCCTaGGCCCTTGGAGCTCCTGTGCATGCTGACCACGTCACCGCTGCT +
Preference number: 5 (lower is better)
Translates to: LGEGVRAGTEDVMTA*ALGAPVHADHVTAA
Trigger: AGCAGCGGTGACGTGGTCAGCATGCACAGGAGCTCCAAGGGCTCAGGCCGTCATCACATCCTCAGTGCCGGCCCTCACGCCCTCACCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS CCA 90 bp CGTCCAGCCGGGCAAACAGGTGGAACAGGGGCACCTCCAGCCCGCTaGCATTGGTCCGCACTGTTGTCACTGCGGTGGCATTGGGGACTG +
Preference number: 5 (lower is better)
Translates to: RPAGQTGGTGAPPAR*HWSALLSLRWHWGL
Trigger: CAGTCCCCAATGCCACCGCAGTGACAACAGTGCGGACCAATGCCAGCGGGCTGGAGGTGCCCCTGTTCCACCTGTTTGCCCGGCTGGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS CCA 90 bp CCTGGGAAGGTGCCATGCAGCTCCTCGTCCAGCCGGGCAAACAGGTaGAACAGGGGCACCTCCAGCCCGCTGGCATTGGTCCGCACTGTT +
Preference number: 5 (lower is better)
Translates to: PGKVPCSSSSSRANR*NRGTSSPLALVRTV
Trigger: AACAGTGCGGACCAATGCCAGCGGGCTGGAGGTGCCCCTGTTCCACCTGTTTGCCCGGCTGGACGAGGAGCTGCATGGCACCTTCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CAA 90 bp ATCAATCGAGATGGAACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTGGCAGCGCCACGGCCACTaGGCGGGCGTGGAAGGGCGT +
Preference number: 5 (lower is better)
Translates to: INRDGTDCHPWHGGCPRWQRHGH*AGVEGR
Trigger: ACGCCCTTCCACGCCCGCCAAGTGGCCGTGGCGCTG...CCAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTTCCATCTCGATTGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS CCA 90 bp TGGTGTGGCATGTCGGGCCACAGCGCCACGGCCACTTGGCGGGCGTaGAAGGGCGTGAAGCAGACGAGAAAGATGATGAGCACCGTGAGC +
Preference number: 5 (lower is better)
Translates to: WCGMSGHSATATWRA*KGVKQTRKMMSTVS
Trigger: GCTCACGGTGCTCATCATCTTTCTCGTCTGCTTCACGCCCTTCCACGCCCGCCAAGTGGCCGTGGCGCTGTGGCCCGACATGCCACACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS CCA 90 bp AGGCTCGTGTGGTGTGGCATGTCGGGCCACAGCGCCACGGCCACTTaGCGGGCGTGGAAGGGCGTGAAGCAGACGAGAAAGATGATGAGC +
Preference number: 5 (lower is better)
Translates to: RLVWCGMSGHSATAT*RAWKGVKQTRKMMS
Trigger: GCTCATCATCTTTCTCGTCTGCTTCACGCCCTTCCACGCCCGCCAAGTGGCCGTGGCGCTGTGGCCCGACATGCCACACCACACGAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CAA 90 bp AACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTGGCATGCCCAGATGAGATGACTGAGGGTGTCTaGGCCCGGGTGCGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: NRLPPLAWWVSTLACPDEMTEGV*ARVRQQ
Trigger: CTGCTGCCGCACCCGGGCCAAGACACCCTCAGTCAT...CTCATCTGGGCATGCCAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CAA 90 bp AGCAAATCACCGGCATTCAGGCCACCACATCCCATCGGAGCCAGTGGCAGACATATGACTGAGGGTGTCTaGGCCCGGGTGCGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: SKSPAFRPPHPIGASGRHMTEGV*ARVRQQ
Trigger: CTGCTGCCGCACCCGGGCCAAGACACCCTCAGTCAT...ATGTCTGCCACTGGCTCCGATGGGATGTGGTGGCCTGAATGCCGGTGATTTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CAA 90 bp CCCTGTGAGTTTTCAGTGGACGTGCTATACCCCAGGAACAGCAAATCACCGGCATACAGCGCCAGCCCGTaGAGCACCAGCCCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: PCEFSVDVLYPRNSKSPAYSASP*STSPAR
Trigger: CCTGGCAGGGCTGGTGCTCAACGGGCTGGCGCTGTA...TGCCGGTGATTTGCTGTTCCTGGGGTATAGCACGTCCACTGAAAACTCACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CAA 90 bp ATCAATCGAGATGGAACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTGGCATTGGTCCGCACTGTaGTCACTGCGGTGGCATTGG +
Preference number: 5 (lower is better)
Translates to: INRDGTDCHPWHGGCPRWHWSAL*SLRWHW
Trigger: CCAATGCCACCGCAGTGACAACAGTGCGGACCAATG...CCAGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTTCCATCTCGATTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CAA 90 bp CAATCAATCGAGATGGAACCGATTGCCACCCCTGGCATGGTGGGTGTCCACGCTCATTGGTCCGCACTGTaGTCACTGCGGTGGCATTGG +
Preference number: 5 (lower is better)
Translates to: QSIEMEPIATPGMVGVHAHWSAL*SLRWHW
Trigger: CCAATGCCACCGCAGTGACAACAGTGCGGACCAATG...AGCGTGGACACCCACCATGCCAGGGGTGGCAATCGGTTCCATCTCGATTGATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CAA 90 bp AGACAAACTGGCCAAAGTGAGGAGCAGCTCCCGGCTACCCCTGTGAGTTTTCAGTCCAGCCCGCTGGCATaGGTCCGCACTGTTGTCACT +
Preference number: 5 (lower is better)
Translates to: RQTGQSEEQLPATPVSFQSSPLA*VRTVVT
Trigger: AGTGACAACAGTGCGGACCAATGCCAGCGGGCTGGA...CTGAAAACTCACAGGGGTAGCCGGGAGCTGCTCCTCACTTTGGCCAGTTTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS-3UTR CAA 90 bp GTGAGTTTTCAGTGGACGTGCTATACCCCAGGAACAGCAAATCACCGGCATTCATCCAGCCCGCTGGCATaGGTCCGCACTGTTGTCACT +
Preference number: 5 (lower is better)
Translates to: VSFQWTCYTPGTANHRHSSSPLA*VRTVVT
Trigger: AGTGACAACAGTGCGGACCAATGCCAGCGGGCTGGA...TGAATGCCGGTGATTTGCTGTTCCTGGGGTATAGCACGTCCACTGAAAACTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS CCA 72 bp CACACGAAGGCGCACACGGCCCTGGCACAGGCAGGCTaGCGGCAGCGGCGGGAGCCTTCGGGCCGCACGATG +
Preference number: 6 (lower is better)
Translates to: HTKAHTALAQAG*RQRREPSGRTM
Trigger: CATCGTGCGGCCCGAAGGCTCCCGCCGCTGCCGCCAGCCTGCCTGTGCCAGGGCCGTGTGCGCCTTCGTGTG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS CCA 72 bp ACCGTGAGCAGGAGCTGCATGGCCCGCACGCGGCGCTaGCGACCCTGGTGGAGCAGACCCGGCCGCGACAGT +
Preference number: 6 (lower is better)
Translates to: TVSRSCMARTRR*RPWWSRPGRDS
Trigger: ACTGTCGCGGCCGGGTCTGCTCCACCAGGGTCGCCAGCGCCGCGTGCGGGCCATGCAGCTCCTGCTCACGGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS CCA 72 bp GGCTCCGTGCACCGCCATCAGCGCCAGCCACAGGCCTaGGAAGGTGCCATGCAGCTCCTCGTCCAGCCGGGC +
Preference number: 6 (lower is better)
Translates to: GSVHRHQRQPQA*EGAMQLLVQPG
Trigger: GCCCGGCTGGACGAGGAGCTGCATGGCACCTTCCCAGGCCTGTGGCTGGCGCTGATGGCGGTGCACGGAGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS CCA 72 bp CGAGGACGTGCGGGAAGGCACAGCGCAGGCAGCCCCTaGCGCCGTAGTACACAGCGAAGCGCGTGGGCAGGG +
Preference number: 6 (lower is better)
Translates to: RGRAGRHSAGSP*RRSTQRSAWAG
Trigger: CCCTGCCCACGCGCTTCGCTGTGTACTACGGCGCCAGGGGCTGCCTGCGCTGTGCCTTCCCGCACGTCCTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS CCA 72 bp AGGAGCTGCATGGCCCGCACGCGGCGCTGGCGACCCTaGTGGAGCAGACCCGGCCGCGACAGTGCACACATG +
Preference number: 6 (lower is better)
Translates to: RSCMARTRRWRP*WSRPGRDSAHM
Trigger: CATGTGTGCACTGTCGCGGCCGGGTCTGCTCCACCAGGGTCGCCAGCGCCGCGTGCGGGCCATGCAGCTCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS GCA 72 bp CTGACCACGTCACCGCTGCTGGGCTCACGCTCTCCGTaGTGGCCGAAGAGGCCTCGGACGGTGGCCTGGAAG +
Preference number: 6 (lower is better)
Translates to: LTTSPLLGSRSP*WPKRPRTVAWK
Trigger: CTTCCAGGCCACCGTCCGAGGCCTCTTCGGCCAGCACGGAGAGCGTGAGCCCAGCAGCGGTGACGTGGTCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS CCA 72 bp CACCCCAGGCCGCGCTTCACCCGGGCAGGCTGGAGATaGGAGTCCTCAGCTCTCAGCTCTGCATGCAGCCCG +
Preference number: 6 (lower is better)
Translates to: HPRPRFTRAGWR*ESSALSSACSP
Trigger: CGGGCTGCATGCAGAGCTGAGAGCTGAGGACTCCCATCTCCAGCCTGCCCGGGTGAAGCGCGGCCTGGGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS CCA 72 bp CACGGCCACGTGGTAGACCACGAGGCTCGTGTGGTGTaGCATGTCGGGCCACAGCGCCACGGCCACTTGGCG +
Preference number: 6 (lower is better)
Translates to: HGHVVDHEARVV*HVGPQRHGHLA
Trigger: CGCCAAGTGGCCGTGGCGCTGTGGCCCGACATGCCACACCACACGAGCCTCGTGGTCTACCACGTGGCCGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS CCA 72 bp ACCACGTCACCGCTGCTGGGCTCACGCTCTCCGTGCTaGCCGAAGAGGCCTCGGACGGTGGCCTGGAAGCCA +
Preference number: 6 (lower is better)
Translates to: TTSPLLGSRSPC*PKRPRTVAWKP
Trigger: TGGCTTCCAGGCCACCGTCCGAGGCCTCTTCGGCCAGCACGGAGAGCGTGAGCCCAGCAGCGGTGACGTGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS CCA 72 bp CCAGCACACCCCAGGCCGCGCTTCACCCGGGCAGGCTaGAGATGGGAGTCCTCAGCTCTCAGCTCTGCATGC +
Preference number: 6 (lower is better)
Translates to: PAHPRPRFTRAG*RWESSALSSAC
Trigger: GCATGCAGAGCTGAGAGCTGAGGACTCCCATCTCCAGCCTGCCCGGGTGAAGCGCGGCCTGGGGTGTGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS CCA 72 bp TGGCATTGGTCCGCACTGTTGTCACTGCGGTGGCATTaGGGACTGCCCCGGCCGAGGGCCCCGCTGGAGACA +
Preference number: 6 (lower is better)
Translates to: WHWSALLSLRWH*GLPRPRAPLET
Trigger: TGTCTCCAGCGGGGCCCTCGGCCGGGGCAGTCCCCAATGCCACCGCAGTGACAACAGTGCGGACCAATGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS GCA 72 bp GCCATCAGCGCCAGCCACAGGCCTGGGAAGGTGCCATaGAGCTCCTCGTCCAGCCGGGCAAACAGGTGGAAC +
Preference number: 6 (lower is better)
Translates to: AISASHRPGKVP*SSSSSRANRWN
Trigger: GTTCCACCTGTTTGCCCGGCTGGACGAGGAGCTGCATGGCACCTTCCCAGGCCTGTGGCTGGCGCTGATGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS GCA 72 bp GAAGACGTACAGCGCCAGCCCGTTGAGCACCAGCCCTaGCAGGAAGATGGCTCCGTGCACCGCCATCAGCGC +
Preference number: 6 (lower is better)
Translates to: EDVQRQPVEHQP*QEDGSVHRHQR
Trigger: GCGCTGATGGCGGTGCACGGAGCCATCTTCCTGGCAGGGCTGGTGCTCAACGGGCTGGCGCTGTACGTCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS CCA 72 bp GTGCCATGCAGCTCCTCGTCCAGCCGGGCAAACAGGTaGAACAGGGGCACCTCCAGCCCGCTGGCATTGGTC +
Preference number: 6 (lower is better)
Translates to: VPCSSSSSRANR*NRGTSSPLALV
Trigger: GACCAATGCCAGCGGGCTGGAGGTGCCCCTGTTCCACCTGTTTGCCCGGCTGGACGAGGAGCTGCATGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS CCA 72 bp GGCAGCCCCTGGCGCCGTAGTACACAGCGAAGCGCGTaGGCAGGGACAGCCCTACCAGTAGATCGGTCACCA +
Preference number: 6 (lower is better)
Translates to: GSPWRRSTQRSA*AGTALPVDRSP
Trigger: TGGTGACCGATCTACTGGTAGGGCTGTCCCTGCCCACGCGCTTCGCTGTGTACTACGGCGCCAGGGGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS CCA 72 bp TGGTGTGGCATGTCGGGCCACAGCGCCACGGCCACTTaGCGGGCGTGGAAGGGCGTGAAGCAGACGAGAAAG +
Preference number: 6 (lower is better)
Translates to: WCGMSGHSATAT*RAWKGVKQTRK
Trigger: CTTTCTCGTCTGCTTCACGCCCTTCCACGCCCGCCAAGTGGCCGTGGCGCTGTGGCCCGACATGCCACACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS TCA 72 bp GATGACGGCCTGAGCCCTTGGAGCTCCTGTGCATGCTaGCCACGTCACCGCTGCTGGGCTCACGCTCTCCGT +
Preference number: 6 (lower is better)
Translates to: DDGLSPWSSCAC*PRHRCWAHALR
Trigger: ACGGAGAGCGTGAGCCCAGCAGCGGTGACGTGGTCAGCATGCACAGGAGCTCCAAGGGCTCAGGCCGTCATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS TCA 72 bp ATGAGTCCTGACCTTCGGCCCCTGGCAGAGCCCTGCTaGCTAAGCCTCGGGCCCATTAGCCAGGGCCTGGGT +
Preference number: 6 (lower is better)
Translates to: MSPDLRPLAEPC*LSLGPISQGLG
Trigger: ACCCAGGCCCTGGCTAATGGGCCCGAGGCTTAGTCAGCAGGGCTCTGCCAGGGGCCGAAGGTCAGGACTCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS GCA 72 bp CTGGCGACCCTGGTGGAGCAGACCCGGCCGCGACAGTaGACACATGATGCGGCCGGTAAACACGCTGATGAC +
Preference number: 6 (lower is better)
Translates to: LATLVEQTRPRQ*THDAAGKHADD
Trigger: GTCATCAGCGTGTTTACCGGCCGCATCATGTGTGCACTGTCGCGGCCGGGTCTGCTCCACCAGGGTCGCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS TCA 72 bp TGGTGGGTGTCCACGCTGGCATGCCCAGATGAGTCCTaGCCTTCGGCCCCTGGCAGAGCCCTGCTGACTAAG +
Preference number: 6 (lower is better)
Translates to: WWVSTLACPDES*PSAPGRALLTK
Trigger: CTTAGTCAGCAGGGCTCTGCCAGGGGCCGAAGGTCAGGACTCATCTGGGCATGCCAGCGTGGACACCCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS CCA 72 bp ACAGGTGGAACAGGGGCACCTCCAGCCCGCTGGCATTaGTCCGCACTGTTGTCACTGCGGTGGCATTGGGGA +
Preference number: 6 (lower is better)
Translates to: TGGTGAPPARWH*SALLSLRWHWG
Trigger: TCCCCAATGCCACCGCAGTGACAACAGTGCGGACCAATGCCAGCGGGCTGGAGGTGCCCCTGTTCCACCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS CCA 72 bp GGGCAAACAGGTGGAACAGGGGCACCTCCAGCCCGCTaGCATTGGTCCGCACTGTTGTCACTGCGGTGGCAT +
Preference number: 6 (lower is better)
Translates to: GQTGGTGAPPAR*HWSALLSLRWH
Trigger: ATGCCACCGCAGTGACAACAGTGCGGACCAATGCCAGCGGGCTGGAGGTGCCCCTGTTCCACCTGTTTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS CCA 72 bp ATGTCGGGCCACAGCGCCACGGCCACTTGGCGGGCGTaGAAGGGCGTGAAGCAGACGAGAAAGATGATGAGC +
Preference number: 6 (lower is better)
Translates to: MSGHSATATWRA*KGVKQTRKMMS
Trigger: GCTCATCATCTTTCTCGTCTGCTTCACGCCCTTCCACGCCCGCCAAGTGGCCGTGGCGCTGTGGCCCGACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2
CDS CAA 72 bp AACAGGTGGAACAGGGGCACCTCCAGCCCGCTGGCATaGGTCCGCACTGTTGTCACTGCGGTGGCATTGGGG +
Preference number: 6 (lower is better)
Translates to: NRWNRGTSSPLA*VRTVVTAVALG
Trigger: CCCCAATGCCACCGCAGTGACAACAGTGCGGACCAATGCCAGCGGGCTGGAGGTGCCCCTGTTCCACCTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377741.4
ENST00000613887.2