RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPR180 (Homo sapiens)

Ensembl gene IDs: ENSG00000152749

Ensembl transcript IDs: ENST00000376958.5

Found 213 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTTTGTCAGAGTAAAACGCACACCTGGCCCAGGAGCCAGAGAAGCTaGAGGAGCCATTCCGGCAGGAACTGGTGTTCCTGTGGGCCTGGC +
Preference number: 1 (lower is better)
Translates to: LCQSKTHTWPRSQRS*RSHSGRNWCSCGPG
Trigger: GCCAGGCCCACAGGAACACCAGTTCCTGCCGGAATGGCTCCTTCAGCTTCTCTGGCTCCTGGGCCAGGTGTGCGTTTTACTCTGACAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR TCA 90 bp TTCCTCACCTCCAGGCTTCATGGCACTCCTACAGCACAACACATATaGTGCCCCTGGAGCTGTGCAGAAGGCTGCCCAAGTGTGGACATG +
Preference number: 1 (lower is better)
Translates to: FLTSRLHGTPTAQHI*CPWSCAEGCPSVDM
Trigger: CATGTCCACACTTGGGCAGCCTTCTGCACAGCTCCAGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCATGAAGCCTGGAGGTGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR GCA 90 bp AAGAGAAGCCAACAGATAAGCAATAATGTGGATAAGCTGCAACAGTaGCTTGTGCCTTGTGCCTTGTCTGGCCCTTCCTCTTACAAAAAG +
Preference number: 1 (lower is better)
Translates to: KRSQQISNNVDKLQQ*LVPCALSGPSSYKK
Trigger: CTTTTTGTAAGAGGAAGGGCCAGACAAGGCACAAGGCACAAGGCACTGTTGCAGCTTATCCACATTATTGCTTATCTGTTGGCTTCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR TCA 90 bp TTTTCCCAGCTGCTTCTGACTACTGTCAACATTCCCTCCTCTAGCTaGCTAGAAACTTCTCTTTTAAATTGGTGCTTCTGGTTGTGGCAG +
Preference number: 1 (lower is better)
Translates to: FSQLLLTTVNIPSSS*LETSLLNWCFWLWQ
Trigger: CTGCCACAACCAGAAGCACCAATTTAAAAGAGAAGTTTCTAGTCAGCTAGAGGAGGGAATGTTGACAGTAGTCAGAAGCAGCTGGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR TCA 90 bp TCTCCTGCTAGTAATACTGTCTGGTTAAAAGCCAGGTTCAAATACTaGAGTGTGCTGAGGTCTTACAGATATTCAAGCGCATGTTCTGAT +
Preference number: 1 (lower is better)
Translates to: SPASNTVWLKARFKY*SVLRSYRYSSACSD
Trigger: ATCAGAACATGCGCTTGAATATCTGTAAGACCTCAGCACACTTCAGTATTTGAACCTGGCTTTTAACCAGACAGTATTACTAGCAGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR GCA 90 bp TGCCTTGTCTGGCCCTTCCTCTTACAAAAAGAATGCAGATCTGGCTaGTACTTTACTTCTGCCTTCTATATCTTGTATCAAACATTTCTT +
Preference number: 1 (lower is better)
Translates to: CLVWPFLLQKECRSG*YFTSAFYILYQTFL
Trigger: AAGAAATGTTTGATACAAGATATAGAAGGCAGAAGTAAAGTAGCAGCCAGATCTGCATTCTTTTTGTAAGAGGAAGGGCCAGACAAGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR GCA 90 bp ATGGTAATATTACTTAGAGAGCTATTGCAAGAAATCAAGCTACGGTaGTTCTACCACACTACTTTCAGATCACAGAGGAAAACCAATCTC +
Preference number: 1 (lower is better)
Translates to: MVILLRELLQEIKLR*FYHTTFRSQRKTNL
Trigger: GAGATTGGTTTTCCTCTGTGATCTGAAAGTAGTGTGGTAGAAGCACCGTAGCTTGATTTCTTGCAATAGCTCTCTAAGTAATATTACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR GCA 90 bp ATCTTGTATCAAACATTTCTTATGGCCTACATTGTCCTGAAATTATaGATGGAAGAGAATTCTGCAGAACCTATCTCCAGGTTGACTAAA +
Preference number: 1 (lower is better)
Translates to: ILYQTFLMAYIVLKL*MEENSAEPISRLTK
Trigger: TTTAGTCAACCTGGAGATAGGTTCTGCAGAATTCTCTTCCATGCATAATTTCAGGACAATGTAGGCCATAAGAAATGTTTGATACAAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR GCA 90 bp CTTCCTCTTACAAAAAGAATGCAGATCTGGCTGCTACTTTACTTCTaGCTTCTATATCTTGTATCAAACATTTCTTATGGCCTACATTGT +
Preference number: 1 (lower is better)
Translates to: LPLTKRMQIWLLLYF*LLYLVSNISYGLHC
Trigger: ACAATGTAGGCCATAAGAAATGTTTGATACAAGATATAGAAGGCAGAAGTAAAGTAGCAGCCAGATCTGCATTCTTTTTGTAAGAGGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR GCA 90 bp CAGACACATGGTCCTATTACAGGACTACATAAAATAAAGAGAAACTaGCTCTGTGAGAATTTGAGAAATCCTCTCGTAACTGATGTTTTA +
Preference number: 1 (lower is better)
Translates to: QTHGPITGLHKIKRN*LCENLRNPLVTDVL
Trigger: TAAAACATCAGTTACGAGAGGATTTCTCAAATTCTCACAGAGGCAGTTTCTCTTTATTTTATGTAGTCCTGTAATAGGACCATGTGTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR-3UTR TCA 90 bp CAGCAGAAGCTGGCACCCTTTGTCAGAGTAAAACGCACACCTGGCCCAGGAGCCGCCAGGTTCAAATACTaGAGTGTGCTGAGGTCTTAC +
Preference number: 2 (lower is better)
Translates to: QQKLAPFVRVKRTPGPGAARFKY*SVLRSY
Trigger: GTAAGACCTCAGCACACTTCAGTATTTGAACCTGGC...GGCTCCTGGGCCAGGTGTGCGTTTTACTCTGACAAAGGGTGCCAGCTTCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR-3UTR GCA 90 bp CGGTTTCTTTTGTGTCTGGCAGTTGGAAAGGGAAGACATGGGAAATGGGGGAAGATGCCCCTGGAGCTGTaGAGAAGGCTGCCCAAGTGT +
Preference number: 2 (lower is better)
Translates to: RFLLCLAVGKGRHGKWGKMPLEL*RRLPKC
Trigger: ACACTTGGGCAGCCTTCTGCACAGCTCCAGGGGCAT...CTTCCCCCATTTCCCATGTCTTCCCTTTCCAACTGCCAGACACAAAAGAAACCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR-3UTR TCA 90 bp CGGTTTCTTTTGTGTCTGGCAGTTGGAAAGGGAAGACATGGGAAATGGGGGAAGACAGCACAACACATATaGTGCCCCTGGAGCTGTGCA +
Preference number: 2 (lower is better)
Translates to: RFLLCLAVGKGRHGKWGKTAQHI*CPWSCA
Trigger: TGCACAGCTCCAGGGGCATCATATGTGTTGTGCTGT...CTTCCCCCATTTCCCATGTCTTCCCTTTCCAACTGCCAGACACAAAAGAAACCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR-3UTR GCA 90 bp CAGCAGAAGCTGGCACCCTTTGTCAGAGTAAAACGCACACCTGGCCCAGGAGCCAGATCAGTGCACTGTTaGTTGCTTAAACACACAGTA +
Preference number: 2 (lower is better)
Translates to: QQKLAPFVRVKRTPGPGARSVHC*LLKHTV
Trigger: TACTGTGTGTTTAAGCAAGCAACAGTGCACTGATCT...GGCTCCTGGGCCAGGTGTGCGTTTTACTCTGACAAAGGGTGCCAGCTTCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR-3UTR GCA 90 bp CAGCAGAAGCTGGCACCCTTTGTCAGAGTAAAACGCACACCTGGCCCAGGAGCCTACTTAGAGAGCTATTaGAAGAAATCAAGCTACGGT +
Preference number: 2 (lower is better)
Translates to: QQKLAPFVRVKRTPGPGAYLESY*KKSSYG
Trigger: ACCGTAGCTTGATTTCTTGCAATAGCTCTCTAAGTA...GGCTCCTGGGCCAGGTGTGCGTTTTACTCTGACAAAGGGTGCCAGCTTCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR-3UTR CCA 90 bp CAGCAGAAGCTGGCACCCTTTGTCAGAGTAAAACGCACACCTGGCCCAGGAGCCCGGCTTAATTATGATTaGGGATTCAACGTAAGAGAA +
Preference number: 2 (lower is better)
Translates to: QQKLAPFVRVKRTPGPGARLNYD*GFNVRE
Trigger: TTCTCTTACGTTGAATCCCCAATCATAATTAAGCCG...GGCTCCTGGGCCAGGTGTGCGTTTTACTCTGACAAAGGGTGCCAGCTTCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR-3UTR TCA 90 bp CGGTTTCTTTTGTGTCTGGCAGTTGGAAAGGGAAGACATGGGAAATGGGGGAAGAGGAACTTGCTAGGATaGGTAGAACCTGTGGGAACT +
Preference number: 2 (lower is better)
Translates to: RFLLCLAVGKGRHGKWGKRNLLG*VEPVGT
Trigger: AGTTCCCACAGGTTCTACTCATCCTAGCAAGTTCCT...CTTCCCCCATTTCCCATGTCTTCCCTTTCCAACTGCCAGACACAAAAGAAACCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR CAA 90 bp AGCAATAATGTGGATAAGCTGCAACAGTGCCTTGTGCCTTGTGCCTaGTCTGGCCCTTCCTCTTACAAAAAGAATGCAGATCTGGCTGCT +
Preference number: 2 (lower is better)
Translates to: SNNVDKLQQCLVPCA*SGPSSYKKNADLAA
Trigger: AGCAGCCAGATCTGCATTCTTTTTGTAAGAGGAAGGGCCAGACAAGGCACAAGGCACAAGGCACTGTTGCAGCTTATCCACATTATTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR-3UTR GCA 90 bp TGGCACTCCTACAGCACAACACATATGATGCCCCTGGAGCTGTGCAGAAGGCTGAAATTCCAAAGAACGTaGAGTCTCCTAGAAGAAACA +
Preference number: 2 (lower is better)
Translates to: WHSYSTTHMMPLELCRRLKFQRT*SLLEET
Trigger: TGTTTCTTCTAGGAGACTGCACGTTCTTTGGAATTT...CAGCCTTCTGCACAGCTCCAGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR-3UTR TCA 90 bp CGGTTTCTTTTGTGTCTGGCAGTTGGAAAGGGAAGACATGGGAAATGGGGGAAGTGGCCTACATTGTCCTaGAATTATGCATGGAAGAGA +
Preference number: 2 (lower is better)
Translates to: RFLLCLAVGKGRHGKWGKWPTLS*NYAWKR
Trigger: TCTCTTCCATGCATAATTTCAGGACAATGTAGGCCA...CTTCCCCCATTTCCCATGTCTTCCCTTTCCAACTGCCAGACACAAAAGAAACCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR-3UTR CCA 90 bp TGGCACTCCTACAGCACAACACATATGATGCCCCTGGAGCTGTGCAGAAGGCTGTTACCTCTTCGTATCTaGCTACTTCTAACAATCATA +
Preference number: 2 (lower is better)
Translates to: WHSYSTTHMMPLELCRRLLPLRI*LLLTII
Trigger: TATGATTGTTAGAAGTAGCCAGATACGAAGAGGTAA...CAGCCTTCTGCACAGCTCCAGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR CAA 90 bp CTTATTATAGGGATTATAGGAGGCGGTTTCTTTTGTGTCTGGCAGTaGGAAAGGGAAGACATGGGAAATGGGGGAAGCAAGGAACTTGCT +
Preference number: 2 (lower is better)
Translates to: LIIGIIGGGFFCVWQ*EREDMGNGGSKELA
Trigger: AGCAAGTTCCTTGCTTCCCCCATTTCCCATGTCTTCCCTTTCCAACTGCCAGACACAAAAGAAACCGCCTCCTATAATCCCTATAATAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR-3UTR GCA 90 bp CGGTTTCTTTTGTGTCTGGCAGTTGGAAAGGGAAGACATGGGAAATGGGGGAAGCACAAACACATATTCTaGCCTGAAAATGAGGCAGAA +
Preference number: 2 (lower is better)
Translates to: RFLLCLAVGKGRHGKWGKHKHIF*PENEAE
Trigger: TTCTGCCTCATTTTCAGGGCAGAATATGTGTTTGTG...CTTCCCCCATTTCCCATGTCTTCCCTTTCCAACTGCCAGACACAAAAGAAACCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR-3UTR CCA 90 bp CGGTTTCTTTTGTGTCTGGCAGTTGGAAAGGGAAGACATGGGAAATGGGGGAAGGCTAGTAATACTGTCTaGTTAAAAGCCAGGTTCAAA +
Preference number: 2 (lower is better)
Translates to: RFLLCLAVGKGRHGKWGKASNTV*LKARFK
Trigger: TTTGAACCTGGCTTTTAACCAGACAGTATTACTAGC...CTTCCCCCATTTCCCATGTCTTCCCTTTCCAACTGCCAGACACAAAAGAAACCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR CAA 90 bp GAAGGCTGCCCAAGTGTGGACATGGTAATATTACTTAGAGAGCTATaGCAAGAAATCAAGCTACGGTGCTTCTACCACACTACTTTCAGA +
Preference number: 2 (lower is better)
Translates to: EGCPSVDMVILLREL*QEIKLRCFYHTTFR
Trigger: TCTGAAAGTAGTGTGGTAGAAGCACCGTAGCTTGATTTCTTGCAATAGCTCTCTAAGTAATATTACCATGTCCACACTTGGGCAGCCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR CAA 90 bp GAGTGGAGGCATTTTGGGAGGAGGGAAGGAAGTCTTGGCAAATTCTaGATTACTGTCTTAATTTCAGCCTTGTCTGTATTAGCAAGACTG +
Preference number: 2 (lower is better)
Translates to: EWRHFGRREGSLGKF*ITVLISALSVLARL
Trigger: CAGTCTTGCTAATACAGACAAGGCTGAAATTAAGACAGTAATCAAGAATTTGCCAAGACTTCCTTCCCTCCTCCCAAAATGCCTCCACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR CAA 90 bp GTACTAGTTTCTTGGATCACTATGGGAAAACCTAGTTTCCGACAGTaGATAATATGCTTGGCTGAGGAGTCAATGTCATGCTACCACCTG +
Preference number: 2 (lower is better)
Translates to: VLVSWITMGKPSFRQ*IICLAEESMSCYHL
Trigger: CAGGTGGTAGCATGACATTGACTCCTCAGCCAAGCATATTATCAACTGTCGGAAACTAGGTTTTCCCATAGTGATCCAAGAAACTAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR-3UTR TCA 90 bp CTTGTGCCTTGTGCCTTGTCTGGCCCTTCCTCTTACAAAAAGAATGCAGATCTGGAACATAGTAATGAGTaGGGACTTCTTTTCCTAAGT +
Preference number: 2 (lower is better)
Translates to: LVPCALSGPSSYKKNADLEHSNE*GLLFLS
Trigger: ACTTAGGAAAAGAAGTCCTCACTCATTACTATGTTC...CAGATCTGCATTCTTTTTGTAAGAGGAAGGGCCAGACAAGGCACAAGGCACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR-3UTR TCA 90 bp GTGGGTTTAACACTCAACACGTTAAGAAAGTCAAATTTCCCTAAATTGCTATGGCCAGGGAAGTTCACTTaGGCATCACTGACCAGAGTT +
Preference number: 2 (lower is better)
Translates to: VGLTLNTLRKSNFPKLLWPGKFT*ASLTRV
Trigger: AACTCTGGTCAGTGATGCTCAAGTGAACTTCCCTGG...CCATAGCAATTTAGGGAAATTTGACTTTCTTAACGTGTTGAGTGTTAAACCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR CAA 90 bp CTGAAATTATGCATGGAAGAGAATTCTGCAGAACCTATCTCCAGGTaGACTAAACTGCACCATATAAATCCACCACAGATGGTGAGTTCT +
Preference number: 2 (lower is better)
Translates to: LKLCMEENSAEPISR*TKLHHINPPQMVSS
Trigger: AGAACTCACCATCTGTGGTGGATTTATATGGTGCAGTTTAGTCAACCTGGAGATAGGTTCTGCAGAATTCTCTTCCATGCATAATTTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR-3UTR TCA 90 bp GATGGCAACTACTTAGAATCCAGTGCCAACACGGATTATAACAAATCCAGTGAGTGGGTAGTTGATGACTaGAACCAACATTTATGTGAA +
Preference number: 2 (lower is better)
Translates to: DGNYLESSANTDYNKSSEWVVDD*NQHLCE
Trigger: TTCACATAAATGTTGGTTTCAGTCATCAACTACCCA...CTCACTGGATTTGTTATAATCCGTGTTGGCACTGGATTCTAAGTAGTTGCCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR-3UTR GCA 90 bp GATGGCAACTACTTAGAATCCAGTGCCAACACGGATTATAACAAATCCAGTGAGGTCCCTTCACCTAAGTaGTCAGATTTTAAAATCCTT +
Preference number: 2 (lower is better)
Translates to: DGNYLESSANTDYNKSSEVPSPK*SDFKIL
Trigger: AAGGATTTTAAAATCTGAGCACTTAGGTGAAGGGAC...CTCACTGGATTTGTTATAATCCGTGTTGGCACTGGATTCTAAGTAGTTGCCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR-3UTR TCA 90 bp GTGGGTTTAACACTCAACACGTTAAGAAAGTCAAATTTCCCTAAATTGCTATGGTTTTTGCATCTCAGCTaGACACAACAGACAATAGCT +
Preference number: 2 (lower is better)
Translates to: VGLTLNTLRKSNFPKLLWFLHLS*TQQTIA
Trigger: AGCTATTGTCTGTTGTGTTCAGCTGAGATGCAAAAA...CCATAGCAATTTAGGGAAATTTGACTTTCTTAACGTGTTGAGTGTTAAACCCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR-3UTR CCA 90 bp GTGGGTTTAACACTCAACACGTTAAGAAAGTCAAATTTCCCTAAATTGCTATGGACAAAGGATTCAAGATaGCAACTACTTAGAATCCAG +
Preference number: 2 (lower is better)
Translates to: VGLTLNTLRKSNFPKLLWTKDSR*QLLRIQ
Trigger: CTGGATTCTAAGTAGTTGCCATCTTGAATCCTTTGT...CCATAGCAATTTAGGGAAATTTGACTTTCTTAACGTGTTGAGTGTTAAACCCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR CCA 72 bp GAGCCATTCCGGCAGGAACTGGTGTTCCTGTGGGCCTaGCTGTTGTCCCACAGGCCAAGAGAAGCCAACAGA +
Preference number: 3 (lower is better)
Translates to: EPFRQELVFLWA*LLSHRPREANR
Trigger: TCTGTTGGCTTCTCTTGGCCTGTGGGACAACAGCCAGGCCCACAGGAACACCAGTTCCTGCCGGAATGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR TCA 72 bp AGTAAAACGCACACCTGGCCCAGGAGCCAGAGAAGCTaGAGGAGCCATTCCGGCAGGAACTGGTGTTCCTGT +
Preference number: 3 (lower is better)
Translates to: SKTHTWPRSQRS*RSHSGRNWCSC
Trigger: ACAGGAACACCAGTTCCTGCCGGAATGGCTCCTTCAGCTTCTCTGGCTCCTGGGCCAGGTGTGCGTTTTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR TCA 72 bp TCCAGGCTTCATGGCACTCCTACAGCACAACACATATaGTGCCCCTGGAGCTGTGCAGAAGGCTGCCCAAGT +
Preference number: 3 (lower is better)
Translates to: SRLHGTPTAQHI*CPWSCAEGCPS
Trigger: ACTTGGGCAGCCTTCTGCACAGCTCCAGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCATGAAGCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR TCA 72 bp CCATACAGGTCTCTCCCTGCCTCTAATCCTCCAGTGTaGATGATGGAGTTGTCCAGCAGAAGCTGGCACCCT +
Preference number: 3 (lower is better)
Translates to: PYRSLPASNPPV*MMELSSRSWHP
Trigger: AGGGTGCCAGCTTCTGCTGGACAACTCCATCATTCACACTGGAGGATTAGAGGCAGGGAGAGACCTGTATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR TCA 72 bp ACAGGTCTCTCCCTGCCTCTAATCCTCCAGTGTGAATaGTGGAGTTGTCCAGCAGAAGCTGGCACCCTTTGT +
Preference number: 3 (lower is better)
Translates to: TGLSLPLILQCE*WSCPAEAGTLC
Trigger: ACAAAGGGTGCCAGCTTCTGCTGGACAACTCCATCATTCACACTGGAGGATTAGAGGCAGGGAGAGACCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR-3UTR CAA 90 bp CAGCAGAAGCTGGCACCCTTTGTCAGAGTAAAACGCACACCTGGCCCAGGAGCCGAACCTATCTCCAGGTaGACTAAACTGCACCATATA +
Preference number: 3 (lower is better)
Translates to: QQKLAPFVRVKRTPGPGAEPISR*TKLHHI
Trigger: TATATGGTGCAGTTTAGTCAACCTGGAGATAGGTTC...GGCTCCTGGGCCAGGTGTGCGTTTTACTCTGACAAAGGGTGCCAGCTTCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR TCA 72 bp GCCAAACTTCACAGATTAAGGGCCCAGTCCTCCATATaGCTGCCCTCACTTCAGAAACTAGCAACTTTGGGC +
Preference number: 3 (lower is better)
Translates to: AKLHRLRAQSSI*LPSLQKLATLG
Trigger: GCCCAAAGTTGCTAGTTTCTGAAGTGAGGGCAGTCATATGGAGGACTGGGCCCTTAATCTGTGAAGTTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR GCA 72 bp TCCTACAGCACAACACATATGATGCCCCTGGAGCTGTaGAGAAGGCTGCCCAAGTGTGGACATGGTAATATT +
Preference number: 3 (lower is better)
Translates to: SYSTTHMMPLEL*RRLPKCGHGNI
Trigger: AATATTACCATGTCCACACTTGGGCAGCCTTCTGCACAGCTCCAGGGGCATCATATGTGTTGTGCTGTAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR-3UTR CAA 90 bp TGGCACTCCTACAGCACAACACATATGATGCCCCTGGAGCTGTGCAGAAGGCTGTTACTTAGAGAGCTATaGCAAGAAATCAAGCTACGG +
Preference number: 3 (lower is better)
Translates to: WHSYSTTHMMPLELCRRLLLREL*QEIKLR
Trigger: CCGTAGCTTGATTTCTTGCAATAGCTCTCTAAGTAA...CAGCCTTCTGCACAGCTCCAGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR TCA 72 bp AGTATTGCCAACCAGGGAAGTTCACTTGAGCATCACTaGCCAGAGTTTCTCTCGGGGTTTCATGACAGGCAT +
Preference number: 3 (lower is better)
Translates to: SIANQGSSLEHH*PEFLSGFHDRH
Trigger: ATGCCTGTCATGAAACCCCGAGAGAAACTCTGGTCAGTGATGCTCAAGTGAACTTCCCTGGTTGGCAATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR-3UTR CAA 90 bp CTTGTGCCTTGTGCCTTGTCTGGCCCTTCCTCTTACAAAAAGAATGCAGATCTGATGAGCAGGTTGAACTaGGTAACTTTGTCATTTTGG +
Preference number: 3 (lower is better)
Translates to: LVPCALSGPSSYKKNADLMSRLN*VTLSFW
Trigger: CCAAAATGACAAAGTTACCAAGTTCAACCTGCTCAT...CAGATCTGCATTCTTTTTGTAAGAGGAAGGGCCAGACAAGGCACAAGGCACAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR GCA 72 bp ACTATGGGAAAACCTAGTTTCCGACAGTTGATAATATaGTTGGCTGAGGAGTCAATGTCATGCTACCACCTG +
Preference number: 3 (lower is better)
Translates to: TMGKPSFRQLII*LAEESMSCYHL
Trigger: CAGGTGGTAGCATGACATTGACTCCTCAGCCAAGCATATTATCAACTGTCGGAAACTAGGTTTTCCCATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR-3UTR CAA 90 bp CTTGTGCCTTGTGCCTTGTCTGGCCCTTCCTCTTACAAAAAGAATGCAGATCTGTTGAACTTGGTAACTTaGTCATTTTGGGTCACAAAC +
Preference number: 3 (lower is better)
Translates to: LVPCALSGPSSYKKNADLLNLVT*SFWVTN
Trigger: GTTTGTGACCCAAAATGACAAAGTTACCAAGTTCAA...CAGATCTGCATTCTTTTTGTAAGAGGAAGGGCCAGACAAGGCACAAGGCACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR-3UTR CAA 90 bp CTTGTGCCTTGTGCCTTGTCTGGCCCTTCCTCTTACAAAAAGAATGCAGATCTGGAGATGATCTCAGATTaGTGTATCTCCTATGTTCAT +
Preference number: 3 (lower is better)
Translates to: LVPCALSGPSSYKKNADLEMISD*CISYVH
Trigger: ATGAACATAGGAGATACACAAATCTGAGATCATCTC...CAGATCTGCATTCTTTTTGTAAGAGGAAGGGCCAGACAAGGCACAAGGCACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR TCA 72 bp CTGCTTCTGACTACTGTCAACATTCCCTCCTCTAGCTaGCTAGAAACTTCTCTTTTAAATTGGTGCTTCTGG +
Preference number: 3 (lower is better)
Translates to: LLLTTVNIPSSS*LETSLLNWCFW
Trigger: CCAGAAGCACCAATTTAAAAGAGAAGTTTCTAGTCAGCTAGAGGAGGGAATGTTGACAGTAGTCAGAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR TCA 72 bp AGTAATACTGTCTGGTTAAAAGCCAGGTTCAAATACTaGAGTGTGCTGAGGTCTTACAGATATTCAAGCGCA +
Preference number: 3 (lower is better)
Translates to: SNTVWLKARFKY*SVLRSYRYSSA
Trigger: TGCGCTTGAATATCTGTAAGACCTCAGCACACTTCAGTATTTGAACCTGGCTTTTAACCAGACAGTATTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR GCA 72 bp TTACTTAGAGAGCTATTGCAAGAAATCAAGCTACGGTaGTTCTACCACACTACTTTCAGATCACAGAGGAAA +
Preference number: 3 (lower is better)
Translates to: LLRELLQEIKLR*FYHTTFRSQRK
Trigger: TTTCCTCTGTGATCTGAAAGTAGTGTGGTAGAAGCACCGTAGCTTGATTTCTTGCAATAGCTCTCTAAGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR GCA 72 bp TGGCCCTTCCTCTTACAAAAAGAATGCAGATCTGGCTaGTACTTTACTTCTGCCTTCTATATCTTGTATCAA +
Preference number: 3 (lower is better)
Translates to: WPFLLQKECRSG*YFTSAFYILYQ
Trigger: TTGATACAAGATATAGAAGGCAGAAGTAAAGTAGCAGCCAGATCTGCATTCTTTTTGTAAGAGGAAGGGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR CCA 72 bp CTCAATACTGGGGCATCACACACACACACAAAAGTATaGCTTTATTACAAAGGATTCAAGATGGCAACTACT +
Preference number: 3 (lower is better)
Translates to: LNTGASHTHTKV*LYYKGFKMATT
Trigger: AGTAGTTGCCATCTTGAATCCTTTGTAATAAAGCCATACTTTTGTGTGTGTGTGTGATGCCCCAGTATTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR-3UTR CAA 90 bp TTATTAGCGAGACATGATAAAAGAAAAGGTTATGACCACTCAGACGATCATGTAAAAGGCCTGAACAGCTaGACAAACAGCAACAGAATA +
Preference number: 3 (lower is better)
Translates to: LLARHDKRKGYDHSDDHVKGLNS*TNSNRI
Trigger: TATTCTGTTGCTGTTTGTCAAGCTGTTCAGGCCTTT...TACATGATCGTCTGAGTGGTCATAACCTTTTCTTTTATCATGTCTCGCTAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR-3UTR CAA 90 bp GTGGGTTTAACACTCAACACGTTAAGAAAGTCAAATTTCCCTAAATTGCTATGGGGTAACTTTGTCATTTaGGGTCACAAACACATATTC +
Preference number: 3 (lower is better)
Translates to: VGLTLNTLRKSNFPKLLWGNFVI*GHKHIF
Trigger: GAATATGTGTTTGTGACCCAAAATGACAAAGTTACC...CCATAGCAATTTAGGGAAATTTGACTTTCTTAACGTGTTGAGTGTTAAACCCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR-3UTR CAA 90 bp GATGTGACTTTACTGGAGATAATAAATAATTACCCTAAAGCAAGCTCTTCTGCCGATTTAATGAGCAGGTaGAACTTGGTAACTTTGTCA +
Preference number: 3 (lower is better)
Translates to: DVTLLEIINNYPKASSSADLMSR*NLVTLS
Trigger: TGACAAAGTTACCAAGTTCAACCTGCTCATTAAATC...GGCAGAAGAGCTTGCTTTAGGGTAATTATTTATTATCTCCAGTAAAGTCACATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR-3UTR CAA 90 bp GTGGGTTTAACACTCAACACGTTAAGAAAGTCAAATTTCCCTAAATTGCTATGGAGGCTACAGAATAAATaGCTGAATGTGCAAAAGTCT +
Preference number: 3 (lower is better)
Translates to: VGLTLNTLRKSNFPKLLWRLQNK*LNVQKS
Trigger: AGACTTTTGCACATTCAGCAATTTATTCTGTAGCCT...CCATAGCAATTTAGGGAAATTTGACTTTCTTAACGTGTTGAGTGTTAAACCCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR TCA 72 bp TCTTGTATCAAACATTTCTTATGGCCTACATTGTCCTaGAATTATGCATGGAAGAGAATTCTGCAGAACCTA +
Preference number: 3 (lower is better)
Translates to: SCIKHFLWPTLS*NYAWKRILQNL
Trigger: TAGGTTCTGCAGAATTCTCTTCCATGCATAATTTCAGGACAATGTAGGCCATAAGAAATGTTTGATACAAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR GCA 72 bp ACAAAAAGAATGCAGATCTGGCTGCTACTTTACTTCTaGCTTCTATATCTTGTATCAAACATTTCTTATGGC +
Preference number: 3 (lower is better)
Translates to: TKRMQIWLLLYF*LLYLVSNISYG
Trigger: GCCATAAGAAATGTTTGATACAAGATATAGAAGGCAGAAGTAAAGTAGCAGCCAGATCTGCATTCTTTTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR TCA 90 bp CAGCAGAAGCTGGCACCCTTTGTCAGAGTAAAACGCACACCTGGCCCAGGAGCCGGGCCGCGGTGCTGCTaGAGCTGCCCCGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: QQKLAPFVRVKRTPGPGAGPRCC*SCPAGS
Trigger: AGACCCTGCGGGGCAGCTTCAGCAGCACCGCGGCCC...GGCTCCTGGGCCAGGTGTGCGTTTTACTCTGACAAAGGGTGCCAGCTTCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CCA 90 bp TGGCACTCCTACAGCACAACACATATGATGCCCCTGGAGCTGTGCAGAAGGCTGAAGTGGCCGATGCGCTaGCCCTGGGCGTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: WHSYSTTHMMPLELCRRLKWPMR*PWASWA
Trigger: GGCCCAGGACGCCCAGGGCCAGCGCATCGGCCACTT...CAGCCTTCTGCACAGCTCCAGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CCA 90 bp TCCTCACCTCCAGGCTTCATGGCACTCCTACAGCACAACACATATGATGCCCCTTGGCCCTGGGCGTCCTaGGCCGCGGTGCTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: SSPPGFMALLQHNTYDAPWPWAS*AAVLLK
Trigger: CTTCAGCAGCACCGCGGCCCAGGACGCCCAGGGCCA...AGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCATGAAGCCTGGAGGTGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR GCA 90 bp TGGCACTCCTACAGCACAACACATATGATGCCCCTGGAGCTGTGCAGAAGGCTGTTACCCTGGCTGCCCTaGGGCCACCAGCAGCACGTG +
Preference number: 4 (lower is better)
Translates to: WHSYSTTHMMPLELCRRLLPWLP*GHQQHV
Trigger: CACGTGCTGCTGGTGGCCGCAGGGCAGCCAGGGTAA...CAGCCTTCTGCACAGCTCCAGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CCA 90 bp TCCTCACCTCCAGGCTTCATGGCACTCCTACAGCACAACACATATGATGCCCCTCGCAGGGTCTTACCCTaGCTGCCCTGCGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: SSPPGFMALLQHNTYDAPRRVLP*LPCGHQ
Trigger: CTGGTGGCCGCAGGGCAGCCAGGGTAAGACCCTGCG...AGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCATGAAGCCTGGAGGTGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR GCA 90 bp CAGCAGAAGCTGGCACCCTTTGTCAGAGTAAAACGCACACCTGGCCCAGGAGCCTGCAACAGTGCCTTGTaGCTTGTGCCTTGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: QQKLAPFVRVKRTPGPGACNSAL*LVPCLA
Trigger: GGCCAGACAAGGCACAAGGCACAAGGCACTGTTGCA...GGCTCCTGGGCCAGGTGTGCGTTTTACTCTGACAAAGGGTGCCAGCTTCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR TCA 90 bp CAGCAGAAGCTGGCACCCTTTGTCAGAGTAAAACGCACACCTGGCCCAGGAGCCTCACTTGAGCATCACTaGCCAGAGTTTCTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: QQKLAPFVRVKRTPGPGASLEHH*PEFLSG
Trigger: CCCCGAGAGAAACTCTGGTCAGTGATGCTCAAGTGA...GGCTCCTGGGCCAGGTGTGCGTTTTACTCTGACAAAGGGTGCCAGCTTCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR GCA 90 bp CGGTTTCTTTTGTGTCTGGCAGTTGGAAAGGGAAGACATGGGAAATGGGGGAAGACTCGAAGTGGCCGATaGGCTGGCCCTGGGCGTCCT +
Preference number: 4 (lower is better)
Translates to: RFLLCLAVGKGRHGKWGKTRSGR*AGPGRP
Trigger: AGGACGCCCAGGGCCAGCGCATCGGCCACTTCGAGT...CTTCCCCCATTTCCCATGTCTTCCCTTTCCAACTGCCAGACACAAAAGAAACCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR GCA 90 bp TGGCACTCCTACAGCACAACACATATGATGCCCCTGGAGCTGTGCAGAAGGCTGATGCCCCTGGAGCTGTaGAGAAGGCTGCCCAAGTGT +
Preference number: 4 (lower is better)
Translates to: WHSYSTTHMMPLELCRRLMPLEL*RRLPKC
Trigger: ACACTTGGGCAGCCTTCTGCACAGCTCCAGGGGCAT...CAGCCTTCTGCACAGCTCCAGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CCA 90 bp CAGCAGAAGCTGGCACCCTTTGTCAGAGTAAAACGCACACCTGGCCCAGGAGCCCACATGCCACGTTTGTaGAGACGGAATCTGGGACAC +
Preference number: 4 (lower is better)
Translates to: QQKLAPFVRVKRTPGPGAHMPRL*RRNLGH
Trigger: GTGTCCCAGATTCCGTCTCCACAAACGTGGCATGTG...GGCTCCTGGGCCAGGTGTGCGTTTTACTCTGACAAAGGGTGCCAGCTTCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CCA 90 bp CAGCAGAAGCTGGCACCCTTTGTCAGAGTAAAACGCACACCTGGCCCAGGAGCCCACCTCCAGGCTTCATaGCACTCCTACAGCACAACA +
Preference number: 4 (lower is better)
Translates to: QQKLAPFVRVKRTPGPGAHLQAS*HSYSTT
Trigger: TGTTGTGCTGTAGGAGTGCCATGAAGCCTGGAGGTG...GGCTCCTGGGCCAGGTGTGCGTTTTACTCTGACAAAGGGTGCCAGCTTCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CCA 90 bp TGGCACTCCTACAGCACAACACATATGATGCCCCTGGAGCTGTGCAGAAGGCTGGAACTGGTGTTCCTGTaGGCCTGGCTGTTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: WHSYSTTHMMPLELCRRLELVFL*AWLLSH
Trigger: GTGGGACAACAGCCAGGCCCACAGGAACACCAGTTC...CAGCCTTCTGCACAGCTCCAGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR GCA 90 bp GATGGCAACTACTTAGAATCCAGTGCCAACACGGATTATAACAAATCCAGTGAGGCCCGTCTCCAGGTCTaGACCGACGCCTCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: DGNYLESSANTDYNKSSEARLQV*TDASAP
Trigger: GGGAGCCGAGGCGTCGGTGCAGACCTGGAGACGGGC...CTCACTGGATTTGTTATAATCCGTGTTGGCACTGGATTCTAAGTAGTTGCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR GCA 90 bp CAGCAGAAGCTGGCACCCTTTGTCAGAGTAAAACGCACACCTGGCCCAGGAGCCCCCACTGGAGAGGTCTaGTTTGAGACTTCTTCATTC +
Preference number: 4 (lower is better)
Translates to: QQKLAPFVRVKRTPGPGAPTGEV*FETSSF
Trigger: GAATGAAGAAGTCTCAAAGCAGACCTCTCCAGTGGG...GGCTCCTGGGCCAGGTGTGCGTTTTACTCTGACAAAGGGTGCCAGCTTCTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR TCA 90 bp CAGCAGAAGCTGGCACCCTTTGTCAGAGTAAAACGCACACCTGGCCCAGGAGCCTTCAGGGAAGGGAAATaGGTGAGAGAAGGACTTCTT +
Preference number: 4 (lower is better)
Translates to: QQKLAPFVRVKRTPGPGAFREGK*VREGLL
Trigger: AAGAAGTCCTTCTCTCACTCATTTCCCTTCCCTGAA...GGCTCCTGGGCCAGGTGTGCGTTTTACTCTGACAAAGGGTGCCAGCTTCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR TCA 90 bp TCCTCACCTCCAGGCTTCATGGCACTCCTACAGCACAACACATATGATGCCCCTGCCCAGTCCTCCATATaGCTGCCCTCACTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: SSPPGFMALLQHNTYDAPAQSSI*LPSLQK
Trigger: TTTCTGAAGTGAGGGCAGTCATATGGAGGACTGGGC...AGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCATGAAGCCTGGAGGTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR GCA 90 bp GATGGCAACTACTTAGAATCCAGTGCCAACACGGATTATAACAAATCCAGTGAGGGGTCTTACCCTGGCTaGCCTGCGGCCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: DGNYLESSANTDYNKSSEGSYPG*PAATSS
Trigger: GCTGCTGGTGGCCGCAGGGCAGCCAGGGTAAGACCC...CTCACTGGATTTGTTATAATCCGTGTTGGCACTGGATTCTAAGTAGTTGCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CCA 90 bp TGGCACTCCTACAGCACAACACATATGATGCCCCTGGAGCTGTGCAGAAGGCTGGGAAGACATGGGAAATaGGGGAAGCAAGGAACTTGC +
Preference number: 4 (lower is better)
Translates to: WHSYSTTHMMPLELCRRLGRHGK*GKQGTC
Trigger: GCAAGTTCCTTGCTTCCCCCATTTCCCATGTCTTCC...CAGCCTTCTGCACAGCTCCAGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CCA 90 bp CAGCAGAAGCTGGCACCCTTTGTCAGAGTAAAACGCACACCTGGCCCAGGAGCCTTTGTGTCTGGCAGTTaGAAAGGGAAGACATGGGAA +
Preference number: 4 (lower is better)
Translates to: QQKLAPFVRVKRTPGPGAFVSGS*KGKTWE
Trigger: TTCCCATGTCTTCCCTTTCCAACTGCCAGACACAAA...GGCTCCTGGGCCAGGTGTGCGTTTTACTCTGACAAAGGGTGCCAGCTTCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR TCA 90 bp CAGCAGAAGCTGGCACCCTTTGTCAGAGTAAAACGCACACCTGGCCCAGGAGCCTCTCCAGCACTAAAATaGTCAAATGGATTCCCTTCG +
Preference number: 4 (lower is better)
Translates to: QQKLAPFVRVKRTPGPGASPALK*SNGFPS
Trigger: CGAAGGGAATCCATTTGATCATTTTAGTGCTGGAGA...GGCTCCTGGGCCAGGTGTGCGTTTTACTCTGACAAAGGGTGCCAGCTTCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR TCA 90 bp TCCTCACCTCCAGGCTTCATGGCACTCCTACAGCACAACACATATGATGCCCCTTCTCAGCTGAGAACCTaGAGGATGAGGATTCAGCCT +
Preference number: 4 (lower is better)
Translates to: SSPPGFMALLQHNTYDAPSQLRT*RMRIQP
Trigger: AGGCTGAATCCTCATCCTTCAGGTTCTCAGCTGAGA...AGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCATGAAGCCTGGAGGTGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CCA 90 bp TGGCACTCCTACAGCACAACACATATGATGCCCCTGGAGCTGTGCAGAAGGCTGGCAATGAGAGGCACATaGAGGGTTTTTGTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: WHSYSTTHMMPLELCRRLAMRGT*RVFVRE
Trigger: TTCCCTGACAAAAACCCTCCATGTGCCTCTCATTGC...CAGCCTTCTGCACAGCTCCAGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CCA 90 bp CAGCAGAAGCTGGCACCCTTTGTCAGAGTAAAACGCACACCTGGCCCAGGAGCCCAGAAACCAGACACATaGTCCTATTACAGGACTACA +
Preference number: 4 (lower is better)
Translates to: QQKLAPFVRVKRTPGPGAQKPDT*SYYRTT
Trigger: TGTAGTCCTGTAATAGGACCATGTGTCTGGTTTCTG...GGCTCCTGGGCCAGGTGTGCGTTTTACTCTGACAAAGGGTGCCAGCTTCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR GCA 90 bp TGGCACTCCTACAGCACAACACATATGATGCCCCTGGAGCTGTGCAGAAGGCTGCATGACAATGAATACTaGAATGCCAGTGGATGCAGG +
Preference number: 4 (lower is better)
Translates to: WHSYSTTHMMPLELCRRLHDNEY*NASGCR
Trigger: CCTGCATCCACTGGCATTGCAGTATTCATTGTCATG...CAGCCTTCTGCACAGCTCCAGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR GCA 90 bp CGGTTTCTTTTGTGTCTGGCAGTTGGAAAGGGAAGACATGGGAAATGGGGGAAGAGCTGTGCAGAAGGCTaGCCAAGTGTGGACATGGTA +
Preference number: 4 (lower is better)
Translates to: RFLLCLAVGKGRHGKWGKSCAEG*PSVDMV
Trigger: TACCATGTCCACACTTGGGCAGCCTTCTGCACAGCT...CTTCCCCCATTTCCCATGTCTTCCCTTTCCAACTGCCAGACACAAAAGAAACCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR GCA 90 bp TGGCACTCCTACAGCACAACACATATGATGCCCCTGGAGCTGTGCAGAAGGCTGAACACACCAGAGTATTaGCAACCAGGGAAGTTCACT +
Preference number: 4 (lower is better)
Translates to: WHSYSTTHMMPLELCRRLNTPEY*QPGKFT
Trigger: AGTGAACTTCCCTGGTTGGCAATACTCTGGTGTGTT...CAGCCTTCTGCACAGCTCCAGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CCA 90 bp GATGGCAACTACTTAGAATCCAGTGCCAACACGGATTATAACAAATCCAGTGAGCCATGGAACTCGAAGTaGCCGATGCGCTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: DGNYLESSANTDYNKSSEPWNSK*PMRWPW
Trigger: CCAGGGCCAGCGCATCGGCCACTTCGAGTTCCATGG...CTCACTGGATTTGTTATAATCCGTGTTGGCACTGGATTCTAAGTAGTTGCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CCA 90 bp TCCTCACCTCCAGGCTTCATGGCACTCCTACAGCACAACACATATGATGCCCCTACACACAGAAGAGCATaGTCACCATGGAACTCGAAG +
Preference number: 4 (lower is better)
Translates to: SSPPGFMALLQHNTYDAPTHRRA*SPWNSK
Trigger: CTTCGAGTTCCATGGTGACCATGCTCTTCTGTGTGT...AGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCATGAAGCCTGGAGGTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CCA 90 bp CAGCAGAAGCTGGCACCCTTTGTCAGAGTAAAACGCACACCTGGCCCAGGAGCCCCCCTATTCCATCTTTaGAGTAACTGGAGAAATGAA +
Preference number: 4 (lower is better)
Translates to: QQKLAPFVRVKRTPGPGAPLFHL*SNWRNE
Trigger: TTCATTTCTCCAGTTACTCCAAAGATGGAATAGGGG...GGCTCCTGGGCCAGGTGTGCGTTTTACTCTGACAAAGGGTGCCAGCTTCTGCTG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CCA 90 bp CGGTTTCTTTTGTGTCTGGCAGTTGGAAAGGGAAGACATGGGAAATGGGGGAAGGTTTTGGCTACACTGTaGAGAATGGCCCTAGTGGGC +
Preference number: 4 (lower is better)
Translates to: RFLLCLAVGKGRHGKWGKVLATL*RMALVG
Trigger: GCCCACTAGGGCCATTCTCCACAGTGTAGCCAAAAC...CTTCCCCCATTTCCCATGTCTTCCCTTTCCAACTGCCAGACACAAAAGAAACCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CCA 90 bp TGGCACTCCTACAGCACAACACATATGATGCCCCTGGAGCTGTGCAGAAGGCTGGGTTTCTTTTGTGTCTaGCAGTTGGAAAGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: WHSYSTTHMMPLELCRRLGFFCV*QLERED
Trigger: GTCTTCCCTTTCCAACTGCCAGACACAAAAGAAACC...CAGCCTTCTGCACAGCTCCAGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CCA 90 bp CTTGTGCCTTGTGCCTTGTCTGGCCCTTCCTCTTACAAAAAGAATGCAGATCTGACCTGGAACCTGGAGTaGAGGCATTTTGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LVPCALSGPSSYKKNADLTWNLE*RHFGRR
Trigger: CCTCCTCCCAAAATGCCTCCACTCCAGGTTCCAGGT...CAGATCTGCATTCTTTTTGTAAGAGGAAGGGCCAGACAAGGCACAAGGCACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR TCA 90 bp TCCTCACCTCCAGGCTTCATGGCACTCCTACAGCACAACACATATGATGCCCCTTGGAGAGGTCTGCTTTaGGACTTCTTCATTCTGACT +
Preference number: 4 (lower is better)
Translates to: SSPPGFMALLQHNTYDAPWRGLL*DFFILT
Trigger: AGTCAGAATGAAGAAGTCTCAAAGCAGACCTCTCCA...AGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCATGAAGCCTGGAGGTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR TCA 90 bp CTTGTGCCTTGTGCCTTGTCTGGCCCTTCCTCTTACAAAAAGAATGCAGATCTGACAGCACAACACATATaGTGCCCCTGGAGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: LVPCALSGPSSYKKNADLTAQHI*CPWSCA
Trigger: TGCACAGCTCCAGGGGCATCATATGTGTTGTGCTGT...CAGATCTGCATTCTTTTTGTAAGAGGAAGGGCCAGACAAGGCACAAGGCACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CCA 90 bp TCCTCACCTCCAGGCTTCATGGCACTCCTACAGCACAACACATATGATGCCCCTTGTGGAGACGGAATCTaGGACACTGTCAGATTATGT +
Preference number: 4 (lower is better)
Translates to: SSPPGFMALLQHNTYDAPCGDGI*DTVRLC
Trigger: ACATAATCTGACAGTGTCCCAGATTCCGTCTCCACA...AGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCATGAAGCCTGGAGGTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CCA 90 bp CAGCAGAAGCTGGCACCCTTTGTCAGAGTAAAACGCACACCTGGCCCAGGAGCCGCTAGTAATACTGTCTaGTTAAAAGCCAGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: QQKLAPFVRVKRTPGPGAASNTV*LKARFK
Trigger: TTTGAACCTGGCTTTTAACCAGACAGTATTACTAGC...GGCTCCTGGGCCAGGTGTGCGTTTTACTCTGACAAAGGGTGCCAGCTTCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR TCA 90 bp TCCTCACCTCCAGGCTTCATGGCACTCCTACAGCACAACACATATGATGCCCCTATCAAGTATCAGAAATaGGGGCGACTTTTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: SSPPGFMALLQHNTYDAPIKYQK*GRLLCP
Trigger: TGGACACAAAAGTCGCCCTCATTTCTGATACTTGAT...AGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCATGAAGCCTGGAGGTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR TCA 90 bp TGGCACTCCTACAGCACAACACATATGATGCCCCTGGAGCTGTGCAGAAGGCTGCAGGCTGCTGCAATTTaGGTGTTATTGTCATTTCTA +
Preference number: 4 (lower is better)
Translates to: WHSYSTTHMMPLELCRRLQAAAI*VLLSFL
Trigger: TAGAAATGACAATAACACTCAAATTGCAGCAGCCTG...CAGCCTTCTGCACAGCTCCAGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR TCA 90 bp TCCTCACCTCCAGGCTTCATGGCACTCCTACAGCACAACACATATGATGCCCCTGATAATATGCTTGGCTaGGGAGTCAATGTCATGCTA +
Preference number: 4 (lower is better)
Translates to: SSPPGFMALLQHNTYDAPDNMLG*GVNVML
Trigger: TAGCATGACATTGACTCCTCAGCCAAGCATATTATC...AGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCATGAAGCCTGGAGGTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR GCA 90 bp TGGCACTCCTACAGCACAACACATATGATGCCCCTGGAGCTGTGCAGAAGGCTGGCATGTATACTTGTCTaGATAAAACACATGCCACGT +
Preference number: 4 (lower is better)
Translates to: WHSYSTTHMMPLELCRRLACILV*IKHMPR
Trigger: ACGTGGCATGTGTTTTATGCAGACAAGTATACATGC...CAGCCTTCTGCACAGCTCCAGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CCA 90 bp TGGCACTCCTACAGCACAACACATATGATGCCCCTGGAGCTGTGCAGAAGGCTGAGATTATGTTCGGTCTaGTTCATGGTCATTGTCAAC +
Preference number: 4 (lower is better)
Translates to: WHSYSTTHMMPLELCRRLRLCSV*FMVIVN
Trigger: GTTGACAATGACCATGAACCAGACCGAACATAATCT...CAGCCTTCTGCACAGCTCCAGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CCA 90 bp TGGCACTCCTACAGCACAACACATATGATGCCCCTGGAGCTGTGCAGAAGGCTGACTTCTCTTTTAAATTaGTGCTTCTGGTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: WHSYSTTHMMPLELCRRLTSLLN*CFWLWQ
Trigger: CTGCCACAACCAGAAGCACCAATTTAAAAGAGAAGT...CAGCCTTCTGCACAGCTCCAGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR CAA 72 bp TCCAATGGTTGGTCTTCTGGTGTGGCTAGCCCCTATTaGAGTCATCTGGTTAGCGTAACTATCAGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: SNGWSSGVASPY*SHLVSVTIRAH
Trigger: GTGAGCTCTGATAGTTACGCTAACCAGATGACTCAAATAGGGGCTAGCCACACCAGAAGACCAACCATTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR TCA 90 bp CGGTTTCTTTTGTGTCTGGCAGTTGGAAAGGGAAGACATGGGAAATGGGGGAAGTTTGATGAAGGACAATaGGGCTGGGATATGTGTGTG +
Preference number: 4 (lower is better)
Translates to: RFLLCLAVGKGRHGKWGKFDEGQ*GWDMCV
Trigger: CACACACATATCCCAGCCTCATTGTCCTTCATCAAA...CTTCCCCCATTTCCCATGTCTTCCCTTTCCAACTGCCAGACACAAAAGAAACCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR GCA 90 bp TGGCACTCCTACAGCACAACACATATGATGCCCCTGGAGCTGTGCAGAAGGCTGCTATTGTCCAACCCATaGATAGACTCAAAAGTAAGT +
Preference number: 4 (lower is better)
Translates to: WHSYSTTHMMPLELCRRLLLSNP*IDSKVS
Trigger: ACTTACTTTTGAGTCTATGCATGGGTTGGACAATAG...CAGCCTTCTGCACAGCTCCAGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR GCA 90 bp TGGCACTCCTACAGCACAACACATATGATGCCCCTGGAGCTGTGCAGAAGGCTGTACTTAGAGAGCTATTaGAAGAAATCAAGCTACGGT +
Preference number: 4 (lower is better)
Translates to: WHSYSTTHMMPLELCRRLYLESY*KKSSYG
Trigger: ACCGTAGCTTGATTTCTTGCAATAGCTCTCTAAGTA...CAGCCTTCTGCACAGCTCCAGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR GCA 90 bp CGGTTTCTTTTGTGTCTGGCAGTTGGAAAGGGAAGACATGGGAAATGGGGGAAGATGACCCCAGGCTGCTaGAATTTGAGTGTTATTGTC +
Preference number: 4 (lower is better)
Translates to: RFLLCLAVGKGRHGKWGKMTPGC*NLSVIV
Trigger: GACAATAACACTCAAATTGCAGCAGCCTGGGGTCAT...CTTCCCCCATTTCCCATGTCTTCCCTTTCCAACTGCCAGACACAAAAGAAACCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CCA 90 bp TGGCACTCCTACAGCACAACACATATGATGCCCCTGGAGCTGTGCAGAAGGCTGCAAACTTCCCATAAATaGTACCCCTATTCCATCTTT +
Preference number: 4 (lower is better)
Translates to: WHSYSTTHMMPLELCRRLQTSHK*YPYSIF
Trigger: AAAGATGGAATAGGGGTACCATTTATGGGAAGTTTG...CAGCCTTCTGCACAGCTCCAGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR GCA 90 bp TGGCACTCCTACAGCACAACACATATGATGCCCCTGGAGCTGTGCAGAAGGCTGCTGCTACTTTACTTCTaGCTTCTATATCTTGTATCA +
Preference number: 4 (lower is better)
Translates to: WHSYSTTHMMPLELCRRLLLLYF*LLYLVS
Trigger: TGATACAAGATATAGAAGGCAGAAGTAAAGTAGCAG...CAGCCTTCTGCACAGCTCCAGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CCA 90 bp GATGGCAACTACTTAGAATCCAGTGCCAACACGGATTATAACAAATCCAGTGAGAGAGCATGGTCACCATaGAACTCGAAGTGGCCGATG +
Preference number: 4 (lower is better)
Translates to: DGNYLESSANTDYNKSSERAWSP*NSKWPM
Trigger: CATCGGCCACTTCGAGTTCCATGGTGACCATGCTCT...CTCACTGGATTTGTTATAATCCGTGTTGGCACTGGATTCTAAGTAGTTGCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CCA 90 bp CTTGTGCCTTGTGCCTTGTCTGGCCCTTCCTCTTACAAAAAGAATGCAGATCTGGTTCGGTCTGGTTCATaGTCATTGTCAACTGAGCTT +
Preference number: 4 (lower is better)
Translates to: LVPCALSGPSSYKKNADLVRSGS*SLSTEL
Trigger: AAGCTCAGTTGACAATGACCATGAACCAGACCGAAC...CAGATCTGCATTCTTTTTGTAAGAGGAAGGGCCAGACAAGGCACAAGGCACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR TCA 90 bp CTTGTGCCTTGTGCCTTGTCTGGCCCTTCCTCTTACAAAAAGAATGCAGATCTGGGTAGCTATGATGACTaGTATCTTCAAACTGTTCCC +
Preference number: 4 (lower is better)
Translates to: LVPCALSGPSSYKKNADLGSYDD*YLQTVP
Trigger: GGGAACAGTTTGAAGATATCAGTCATCATAGCTACC...CAGATCTGCATTCTTTTTGTAAGAGGAAGGGCCAGACAAGGCACAAGGCACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR TCA 90 bp CGGTTTCTTTTGTGTCTGGCAGTTGGAAAGGGAAGACATGGGAAATGGGGGAAGATTCCCTCCTCTAGCTaGCTAGAAACTTCTCTTTTA +
Preference number: 4 (lower is better)
Translates to: RFLLCLAVGKGRHGKWGKIPSSS*LETSLL
Trigger: TAAAAGAGAAGTTTCTAGTCAGCTAGAGGAGGGAAT...CTTCCCCCATTTCCCATGTCTTCCCTTTCCAACTGCCAGACACAAAAGAAACCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR GCA 90 bp CTTGTGCCTTGTGCCTTGTCTGGCCCTTCCTCTTACAAAAAGAATGCAGATCTGCATGGAAGAGAATTCTaGAGAACCTATCTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: LVPCALSGPSSYKKNADLHGREF*RTYLQV
Trigger: AACCTGGAGATAGGTTCTGCAGAATTCTCTTCCATG...CAGATCTGCATTCTTTTTGTAAGAGGAAGGGCCAGACAAGGCACAAGGCACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR TCA 90 bp CGGTTTCTTTTGTGTCTGGCAGTTGGAAAGGGAAGACATGGGAAATGGGGGAAGAGTAAGTATAACATCTaGATTTGGGAAGCGATGTCA +
Preference number: 4 (lower is better)
Translates to: RFLLCLAVGKGRHGKWGKSKYNI*IWEAMS
Trigger: TGACATCGCTTCCCAAATTCAGATGTTATACTTACT...CTTCCCCCATTTCCCATGTCTTCCCTTTCCAACTGCCAGACACAAAAGAAACCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR TCA 90 bp CGGTTTCTTTTGTGTCTGGCAGTTGGAAAGGGAAGACATGGGAAATGGGGGAAGTGGGTAGTTGATGACTaGAACCAACATTTATGTGAA +
Preference number: 4 (lower is better)
Translates to: RFLLCLAVGKGRHGKWGKWVVDD*NQHLCE
Trigger: TTCACATAAATGTTGGTTTCAGTCATCAACTACCCA...CTTCCCCCATTTCCCATGTCTTCCCTTTCCAACTGCCAGACACAAAAGAAACCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR TCA 90 bp CGGTTTCTTTTGTGTCTGGCAGTTGGAAAGGGAAGACATGGGAAATGGGGGAAGGAACATAGTAATGAGTaGGGACTTCTTTTCCTAAGT +
Preference number: 4 (lower is better)
Translates to: RFLLCLAVGKGRHGKWGKEHSNE*GLLFLS
Trigger: ACTTAGGAAAAGAAGTCCTCACTCATTACTATGTTC...CTTCCCCCATTTCCCATGTCTTCCCTTTCCAACTGCCAGACACAAAAGAAACCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR GCA 90 bp CGGTTTCTTTTGTGTCTGGCAGTTGGAAAGGGAAGACATGGGAAATGGGGGAAGGTCCCTTCACCTAAGTaGTCAGATTTTAAAATCCTT +
Preference number: 4 (lower is better)
Translates to: RFLLCLAVGKGRHGKWGKVPSPK*SDFKIL
Trigger: AAGGATTTTAAAATCTGAGCACTTAGGTGAAGGGAC...CTTCCCCCATTTCCCATGTCTTCCCTTTCCAACTGCCAGACACAAAAGAAACCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CCA 90 bp GATGTGACTTTACTGGAGATAATAAATAATTACCCTAAAGCAAGCTCTTCTGCCAGTAAAACGCACACCTaGCCCAGGAGCCAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: DVTLLEIINNYPKASSSASKTHT*PRSQRS
Trigger: GCTTCTCTGGCTCCTGGGCCAGGTGTGCGTTTTACT...GGCAGAAGAGCTTGCTTTAGGGTAATTATTTATTATCTCCAGTAAAGTCACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR TCA 90 bp GATGGCAACTACTTAGAATCCAGTGCCAACACGGATTATAACAAATCCAGTGAGTGTAGAACTCCCTTTTaGGTGTACTTCTCTCCACTG +
Preference number: 4 (lower is better)
Translates to: DGNYLESSANTDYNKSSECRTPF*VYFSPL
Trigger: CAGTGGAGAGAAGTACACTCAAAAGGGAGTTCTACA...CTCACTGGATTTGTTATAATCCGTGTTGGCACTGGATTCTAAGTAGTTGCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR TCA 90 bp GATGGCAACTACTTAGAATCCAGTGCCAACACGGATTATAACAAATCCAGTGAGCTCTTAAGAGTCTACTaGGATACACAACACAGGGCT +
Preference number: 4 (lower is better)
Translates to: DGNYLESSANTDYNKSSELLRVY*DTQHRA
Trigger: AGCCCTGTGTTGTGTATCTCAGTAGACTCTTAAGAG...CTCACTGGATTTGTTATAATCCGTGTTGGCACTGGATTCTAAGTAGTTGCCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR GCA 90 bp GATGTGACTTTACTGGAGATAATAAATAATTACCCTAAAGCAAGCTCTTCTGCCTGCAATGCCAGTGGATaGAGGCGTAGAATCCCACTG +
Preference number: 4 (lower is better)
Translates to: DVTLLEIINNYPKASSSACNASG*RRRIPL
Trigger: CAGTGGGATTCTACGCCTGCATCCACTGGCATTGCA...GGCAGAAGAGCTTGCTTTAGGGTAATTATTTATTATCTCCAGTAAAGTCACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR GCA 90 bp GATGGCAACTACTTAGAATCCAGTGCCAACACGGATTATAACAAATCCAGTGAGTCTCTTTTAAATTGGTaGTTCTGGTTGTGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: DGNYLESSANTDYNKSSESLLNW*FWLWQA
Trigger: GGCCTGCCACAACCAGAAGCACCAATTTAAAAGAGA...CTCACTGGATTTGTTATAATCCGTGTTGGCACTGGATTCTAAGTAGTTGCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR CAA 72 bp TGCATGGAAGAGAATTCTGCAGAACCTATCTCCAGGTaGACTAAACTGCACCATATAAATCCACCACAGATG +
Preference number: 4 (lower is better)
Translates to: CMEENSAEPISR*TKLHHINPPQM
Trigger: CATCTGTGGTGGATTTATATGGTGCAGTTTAGTCAACCTGGAGATAGGTTCTGCAGAATTCTCTTCCATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR CAA 72 bp TCTTGGATCACTATGGGAAAACCTAGTTTCCGACAGTaGATAATATGCTTGGCTGAGGAGTCAATGTCATGC +
Preference number: 4 (lower is better)
Translates to: SWITMGKPSFRQ*IICLAEESMSC
Trigger: GCATGACATTGACTCCTCAGCCAAGCATATTATCAACTGTCGGAAACTAGGTTTTCCCATAGTGATCCAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR TCA 90 bp GATGGCAACTACTTAGAATCCAGTGCCAACACGGATTATAACAAATCCAGTGAGTGGGCTAATATCATATaGCTCAAAACTCCAACCCTC +
Preference number: 4 (lower is better)
Translates to: DGNYLESSANTDYNKSSEWANII*LKTPTL
Trigger: GAGGGTTGGAGTTTTGAGTCATATGATATTAGCCCA...CTCACTGGATTTGTTATAATCCGTGTTGGCACTGGATTCTAAGTAGTTGCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CCA 90 bp GTGGGTTTAACACTCAACACGTTAAGAAAGTCAAATTTCCCTAAATTGCTATGGTGGAAAGGGAAGACATaGGAAATGGGGGAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: VGLTLNTLRKSNFPKLLWWKGKT*EMGEAR
Trigger: CCTTGCTTCCCCCATTTCCCATGTCTTCCCTTTCCA...CCATAGCAATTTAGGGAAATTTGACTTTCTTAACGTGTTGAGTGTTAAACCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CCA 90 bp GATGTGACTTTACTGGAGATAATAAATAATTACCCTAAAGCAAGCTCTTCTGCCTCTAGACCTGGAACCTaGAGTGGAGGCATTTTGGGA +
Preference number: 4 (lower is better)
Translates to: DVTLLEIINNYPKASSSASRPGT*SGGILG
Trigger: TCCCAAAATGCCTCCACTCCAGGTTCCAGGTCTAGA...GGCAGAAGAGCTTGCTTTAGGGTAATTATTTATTATCTCCAGTAAAGTCACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR CAA 72 bp CCAAGTGTGGACATGGTAATATTACTTAGAGAGCTATaGCAAGAAATCAAGCTACGGTGCTTCTACCACACT +
Preference number: 4 (lower is better)
Translates to: PSVDMVILLREL*QEIKLRCFYHT
Trigger: AGTGTGGTAGAAGCACCGTAGCTTGATTTCTTGCAATAGCTCTCTAAGTAATATTACCATGTCCACACTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR TCA 90 bp GTGGGTTTAACACTCAACACGTTAAGAAAGTCAAATTTCCCTAAATTGCTATGGAGGAACTTGCTAGGATaGGTAGAACCTGTGGGAACT +
Preference number: 4 (lower is better)
Translates to: VGLTLNTLRKSNFPKLLWRNLLG*VEPVGT
Trigger: AGTTCCCACAGGTTCTACTCATCCTAGCAAGTTCCT...CCATAGCAATTTAGGGAAATTTGACTTTCTTAACGTGTTGAGTGTTAAACCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR TCA 90 bp TTATTAGCGAGACATGATAAAAGAAAAGGTTATGACCACTCAGACGATCATGTACCAGGGAAGTTCACTTaGGCATCACTGACCAGAGTT +
Preference number: 4 (lower is better)
Translates to: LLARHDKRKGYDHSDDHVPGKFT*ASLTRV
Trigger: AACTCTGGTCAGTGATGCTCAAGTGAACTTCCCTGG...TACATGATCGTCTGAGTGGTCATAACCTTTTCTTTTATCATGTCTCGCTAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR GCA 90 bp GATGGCAACTACTTAGAATCCAGTGCCAACACGGATTATAACAAATCCAGTGAGCACAAACACATATTCTaGCCTGAAAATGAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: DGNYLESSANTDYNKSSEHKHIF*PENEAE
Trigger: TTCTGCCTCATTTTCAGGGCAGAATATGTGTTTGTG...CTCACTGGATTTGTTATAATCCGTGTTGGCACTGGATTCTAAGTAGTTGCCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CCA 90 bp GATGGCAACTACTTAGAATCCAGTGCCAACACGGATTATAACAAATCCAGTGAGTTTCTTGGATCACTATaGGAAAACCTAGTTTCCGAC +
Preference number: 4 (lower is better)
Translates to: DGNYLESSANTDYNKSSEFLGSL*ENLVSD
Trigger: GTCGGAAACTAGGTTTTCCCATAGTGATCCAAGAAA...CTCACTGGATTTGTTATAATCCGTGTTGGCACTGGATTCTAAGTAGTTGCCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR TCA 90 bp GATGTGACTTTACTGGAGATAATAAATAATTACCCTAAAGCAAGCTCTTCTGCCGAGACTTCTTCATTCTaGCTATTGTCCAACCCATGC +
Preference number: 4 (lower is better)
Translates to: DVTLLEIINNYPKASSSAETSSF*LLSNPC
Trigger: GCATGGGTTGGACAATAGTCAGAATGAAGAAGTCTC...GGCAGAAGAGCTTGCTTTAGGGTAATTATTTATTATCTCCAGTAAAGTCACATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR TCA 90 bp TTATTAGCGAGACATGATAAAAGAAAAGGTTATGACCACTCAGACGATCATGTATTCACCTACACTAAATaGCCCCAGGCTGCTGCAATT +
Preference number: 4 (lower is better)
Translates to: LLARHDKRKGYDHSDDHVFTYTK*PQAAAI
Trigger: AATTGCAGCAGCCTGGGGTCATTTAGTGTAGGTGAA...TACATGATCGTCTGAGTGGTCATAACCTTTTCTTTTATCATGTCTCGCTAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR GCA 90 bp GATGTGACTTTACTGGAGATAATAAATAATTACCCTAAAGCAAGCTCTTCTGCCTTTGAGCATCTAGTATaGACCAGGGAGTGTCCTAGT +
Preference number: 4 (lower is better)
Translates to: DVTLLEIINNYPKASSSAFEHLV*TRECPS
Trigger: ACTAGGACACTCCCTGGTGCATACTAGATGCTCAAA...GGCAGAAGAGCTTGCTTTAGGGTAATTATTTATTATCTCCAGTAAAGTCACATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR GCA 90 bp GTGGGTTTAACACTCAACACGTTAAGAAAGTCAAATTTCCCTAAATTGCTATGGGCTTCTGACACCAACTaGCTGAAGTTAAGCCAAACT +
Preference number: 4 (lower is better)
Translates to: VGLTLNTLRKSNFPKLLWASDTN*LKLSQT
Trigger: AGTTTGGCTTAACTTCAGGCAGTTGGTGTCAGAAGC...CCATAGCAATTTAGGGAAATTTGACTTTCTTAACGTGTTGAGTGTTAAACCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CCA 90 bp GATGTGACTTTACTGGAGATAATAAATAATTACCCTAAAGCAAGCTCTTCTGCCTTAAATTGGTGCTTCTaGTTGTGGCAGGCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: DVTLLEIINNYPKASSSALNWCF*LWQARN
Trigger: GTTTCTGGCCTGCCACAACCAGAAGCACCAATTTAA...GGCAGAAGAGCTTGCTTTAGGGTAATTATTTATTATCTCCAGTAAAGTCACATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR TCA 90 bp TTATTAGCGAGACATGATAAAAGAAAAGGTTATGACCACTCAGACGATCATGTAGGGATATCTTCCACCTaGGAATTCTCCTTGTCATCT +
Preference number: 4 (lower is better)
Translates to: LLARHDKRKGYDHSDDHVGISST*EFSLSS
Trigger: AGATGACAAGGAGAATTCTCAGGTGGAAGATATCCC...TACATGATCGTCTGAGTGGTCATAACCTTTTCTTTTATCATGTCTCGCTAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR GCA 90 bp GTGGGTTTAACACTCAACACGTTAAGAAAGTCAAATTTCCCTAAATTGCTATGGAGCTATAACCATGACTaGTTTGCTGTAGCTTTAGCC +
Preference number: 4 (lower is better)
Translates to: VGLTLNTLRKSNFPKLLWSYNHD*FAVALA
Trigger: GGCTAAAGCTACAGCAAAGCAGTCATGGTTATAGCT...CCATAGCAATTTAGGGAAATTTGACTTTCTTAACGTGTTGAGTGTTAAACCCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR GCA 90 bp GTGGGTTTAACACTCAACACGTTAAGAAAGTCAAATTTCCCTAAATTGCTATGGGAAATCAAGCTACGGTaGTTCTACCACACTACTTTC +
Preference number: 4 (lower is better)
Translates to: VGLTLNTLRKSNFPKLLWEIKLR*FYHTTF
Trigger: GAAAGTAGTGTGGTAGAAGCACCGTAGCTTGATTTC...CCATAGCAATTTAGGGAAATTTGACTTTCTTAACGTGTTGAGTGTTAAACCCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CCA 90 bp GATGTGACTTTACTGGAGATAATAAATAATTACCCTAAAGCAAGCTCTTCTGCCTGTGTCCAGATGATATaGTCAGTGGTAGTGTTACTG +
Preference number: 4 (lower is better)
Translates to: DVTLLEIINNYPKASSSACVQMI*SVVVLL
Trigger: CAGTAACACTACCACTGACCATATCATCTGGACACA...GGCAGAAGAGCTTGCTTTAGGGTAATTATTTATTATCTCCAGTAAAGTCACATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR CAA 72 bp TGGTACAAATTAAGAGATAACCAGATCATATGGGCCTaGCAGAACATAGTAATGAGTGAGGACTTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: WYKLRDNQIIWA*QNIVMSEDFFS
Trigger: GGAAAAGAAGTCCTCACTCATTACTATGTTCTGCAAGGCCCATATGATCTGGTTATCTCTTAATTTGTACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR CAA 72 bp AGATCTGGCTGCTACTTTACTTCTGCCTTCTATATCTaGTATCAAACATTTCTTATGGCCTACATTGTCCTG +
Preference number: 4 (lower is better)
Translates to: RSGCYFTSAFYI*YQTFLMAYIVL
Trigger: CAGGACAATGTAGGCCATAAGAAATGTTTGATACAAGATATAGAAGGCAGAAGTAAAGTAGCAGCCAGATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR CAA 72 bp CATTTTGGGAGGAGGGAAGGAAGTCTTGGCAAATTCTaGATTACTGTCTTAATTTCAGCCTTGTCTGTATTA +
Preference number: 4 (lower is better)
Translates to: HFGRREGSLGKF*ITVLISALSVL
Trigger: TAATACAGACAAGGCTGAAATTAAGACAGTAATCAAGAATTTGCCAAGACTTCCTTCCCTCCTCCCAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR TCA 90 bp TTATTAGCGAGACATGATAAAAGAAAAGGTTATGACCACTCAGACGATCATGTAAATAGCCTGCCACAATaGTTGAGCATAAATGCAAGC +
Preference number: 4 (lower is better)
Translates to: LLARHDKRKGYDHSDDHVNSLPQ*LSINAS
Trigger: GCTTGCATTTATGCTCAATCATTGTGGCAGGCTATT...TACATGATCGTCTGAGTGGTCATAACCTTTTCTTTTATCATGTCTCGCTAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR TCA 90 bp TTATTAGCGAGACATGATAAAAGAAAAGGTTATGACCACTCAGACGATCATGTATGGCCTACATTGTCCTaGAATTATGCATGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: LLARHDKRKGYDHSDDHVWPTLS*NYAWKR
Trigger: TCTCTTCCATGCATAATTTCAGGACAATGTAGGCCA...TACATGATCGTCTGAGTGGTCATAACCTTTTCTTTTATCATGTCTCGCTAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR GCA 90 bp GTGGGTTTAACACTCAACACGTTAAGAAAGTCAAATTTCCCTAAATTGCTATGGACCTTTAAAATCATGTaGATGGGTCCGCCTTTCTTA +
Preference number: 4 (lower is better)
Translates to: VGLTLNTLRKSNFPKLLWTFKIM*MGPPFL
Trigger: TAAGAAAGGCGGACCCATGCACATGATTTTAAAGGT...CCATAGCAATTTAGGGAAATTTGACTTTCTTAACGTGTTGAGTGTTAAACCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CCA 90 bp GATGTGACTTTACTGGAGATAATAAATAATTACCCTAAAGCAAGCTCTTCTGCCACTAAAATGATCAAATaGATTCCCTTCGGCATCTGG +
Preference number: 4 (lower is better)
Translates to: DVTLLEIINNYPKASSSATKMIK*IPFGIW
Trigger: CCAGATGCCGAAGGGAATCCATTTGATCATTTTAGT...GGCAGAAGAGCTTGCTTTAGGGTAATTATTTATTATCTCCAGTAAAGTCACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CCA 90 bp TTATTAGCGAGACATGATAAAAGAAAAGGTTATGACCACTCAGACGATCATGTAACTGGTAACAGAGTTTaGATTCAGGGAAGGGAAATG +
Preference number: 4 (lower is better)
Translates to: LLARHDKRKGYDHSDDHVTGNRV*IQGREM
Trigger: CATTTCCCTTCCCTGAATCCAAACTCTGTTACCAGT...TACATGATCGTCTGAGTGGTCATAACCTTTTCTTTTATCATGTCTCGCTAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR CAA 72 bp TTTAATGAGCAGGTTGAACTTGGTAACTTTGTCATTTaGGGTCACAAACACATATTCTGCCCTGAAAATGAG +
Preference number: 4 (lower is better)
Translates to: FNEQVELGNFVI*GHKHIFCPENE
Trigger: CTCATTTTCAGGGCAGAATATGTGTTTGTGACCCAAAATGACAAAGTTACCAAGTTCAACCTGCTCATTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
3UTR CAA 72 bp CTTGGCAAATTCTTGATTACTGTCTTAATTTCAGCCTaGTCTGTATTAGCAAGACTGAAAACCAACAACGTG +
Preference number: 4 (lower is better)
Translates to: LGKFLITVLISA*SVLARLKTNNV
Trigger: CACGTTGTTGGTTTTCAGTCTTGCTAATACAGACAAGGCTGAAATTAAGACAGTAATCAAGAATTTGCCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR GCA 90 bp TTATTAGCGAGACATGATAAAAGAAAAGGTTATGACCACTCAGACGATCATGTAAGATCAGTGCACTGTTaGTTGCTTAAACACACAGTA +
Preference number: 4 (lower is better)
Translates to: LLARHDKRKGYDHSDDHVRSVHC*LLKHTV
Trigger: TACTGTGTGTTTAAGCAAGCAACAGTGCACTGATCT...TACATGATCGTCTGAGTGGTCATAACCTTTTCTTTTATCATGTCTCGCTAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CCA 90 bp GATGTGACTTTACTGGAGATAATAAATAATTACCCTAAAGCAAGCTCTTCTGCCTTCGTACTAGTTTCTTaGATCACTATGGGAAAACCT +
Preference number: 4 (lower is better)
Translates to: DVTLLEIINNYPKASSSAFVLVS*ITMGKP
Trigger: AGGTTTTCCCATAGTGATCCAAGAAACTAGTACGAA...GGCAGAAGAGCTTGCTTTAGGGTAATTATTTATTATCTCCAGTAAAGTCACATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR TCA 90 bp TTATTAGCGAGACATGATAAAAGAAAAGGTTATGACCACTCAGACGATCATGTATTAGGCATACAGCAATaGACAATAGAGACAAACTCA +
Preference number: 4 (lower is better)
Translates to: LLARHDKRKGYDHSDDHVLGIQQ*TIETNS
Trigger: TGAGTTTGTCTCTATTGTTCATTGCTGTATGCCTAA...TACATGATCGTCTGAGTGGTCATAACCTTTTCTTTTATCATGTCTCGCTAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR GCA 90 bp TTATTAGCGAGACATGATAAAAGAAAAGGTTATGACCACTCAGACGATCATGTATTTTCCAACAGCTACTaGTATGTTGTTGATTCTGAC +
Preference number: 4 (lower is better)
Translates to: LLARHDKRKGYDHSDDHVFSNSY*YVVDSD
Trigger: GTCAGAATCAACAACATAGCAGTAGCTGTTGGAAAA...TACATGATCGTCTGAGTGGTCATAACCTTTTCTTTTATCATGTCTCGCTAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR GCA 90 bp GTGGGTTTAACACTCAACACGTTAAGAAAGTCAAATTTCCCTAAATTGCTATGGCTCAGCAAAGTGCTATaGGTACTATTACAGTTTATT +
Preference number: 4 (lower is better)
Translates to: VGLTLNTLRKSNFPKLLWLSKVL*VLLQFI
Trigger: AATAAACTGTAATAGTACGCATAGCACTTTGCTGAG...CCATAGCAATTTAGGGAAATTTGACTTTCTTAACGTGTTGAGTGTTAAACCCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CCA 90 bp TTATTAGCGAGACATGATAAAAGAAAAGGTTATGACCACTCAGACGATCATGTATTACCTCTTCGTATCTaGCTACTTCTAACAATCATA +
Preference number: 4 (lower is better)
Translates to: LLARHDKRKGYDHSDDHVLPLRI*LLLTII
Trigger: TATGATTGTTAGAAGTAGCCAGATACGAAGAGGTAA...TACATGATCGTCTGAGTGGTCATAACCTTTTCTTTTATCATGTCTCGCTAATAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS TCA 90 bp AGTGGCCGATGCGCTGGCCCTGGGCGTCCTGGGCCGCGGTGCTGCTaGAGCTGCCCCGCAGGGTCTTACCCTGGCTGCCCTGCGGCCACC +
Preference number: 5 (lower is better)
Translates to: SGRCAGPGRPGPRCC*SCPAGSYPGCPAAT
Trigger: GGTGGCCGCAGGGCAGCCAGGGTAAGACCCTGCGGGGCAGCTTCAGCAGCACCGCGGCCCAGGACGCCCAGGGCCAGCGCATCGGCCACT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS CCA 90 bp AGAGCATGGTCACCATGGAACTCGAAGTGGCCGATGCGCTGGCCCTaGGCGTCCTGGGCCGCGGTGCTGCTGAAGCTGCCCCGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: RAWSPWNSKWPMRWP*ASWAAVLLKLPRRV
Trigger: GACCCTGCGGGGCAGCTTCAGCAGCACCGCGGCCCAGGACGCCCAGGGCCAGCGCATCGGCCACTTCGAGTTCCATGGTGACCATGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CAA 90 bp TCCTCACCTCCAGGCTTCATGGCACTCCTACAGCACAACACATATGATGCCCCTAAACACATGCCACGTTaGTGGAGACGGAATCTGGGA +
Preference number: 5 (lower is better)
Translates to: SSPPGFMALLQHNTYDAPKHMPR*WRRNLG
Trigger: TCCCAGATTCCGTCTCCACAAACGTGGCATGTGTTT...AGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCATGAAGCCTGGAGGTGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CAA 90 bp CTTGTGCCTTGTGCCTTGTCTGGCCCTTCCTCTTACAAAAAGAATGCAGATCTGACAGTGCCTTGTGCCTaGTGCCTTGTCTGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: LVPCALSGPSSYKKNADLTVPCA*CLVWPF
Trigger: GAAGGGCCAGACAAGGCACAAGGCACAAGGCACTGT...CAGATCTGCATTCTTTTTGTAAGAGGAAGGGCCAGACAAGGCACAAGGCACAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CAA 90 bp CGGTTTCTTTTGTGTCTGGCAGTTGGAAAGGGAAGACATGGGAAATGGGGGAAGAGCTGCAACAGTGCCTaGTGCCTTGTGCCTTGTCTG +
Preference number: 5 (lower is better)
Translates to: RFLLCLAVGKGRHGKWGKSCNSA*CLVPCL
Trigger: CAGACAAGGCACAAGGCACAAGGCACTGTTGCAGCT...CTTCCCCCATTTCCCATGTCTTCCCTTTCCAACTGCCAGACACAAAAGAAACCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CAA 90 bp CAGCAGAAGCTGGCACCCTTTGTCAGAGTAAAACGCACACCTGGCCCAGGAGCCAACTTCTCTTTTAAATaGGTGCTTCTGGTTGTGGCA +
Preference number: 5 (lower is better)
Translates to: QQKLAPFVRVKRTPGPGANFSFK*VLLVVA
Trigger: TGCCACAACCAGAAGCACCAATTTAAAAGAGAAGTT...GGCTCCTGGGCCAGGTGTGCGTTTTACTCTGACAAAGGGTGCCAGCTTCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CAA 90 bp TGGCACTCCTACAGCACAACACATATGATGCCCCTGGAGCTGTGCAGAAGGCTGATTCTCCTTGTCATCTaGGCATGTATACTTGTCTGC +
Preference number: 5 (lower is better)
Translates to: WHSYSTTHMMPLELCRRLILLVI*ACILVC
Trigger: GCAGACAAGTATACATGCCAAGATGACAAGGAGAAT...CAGCCTTCTGCACAGCTCCAGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CAA 90 bp CGGTTTCTTTTGTGTCTGGCAGTTGGAAAGGGAAGACATGGGAAATGGGGGAAGAGGAGGCGGTTTCTTTaGTGTCTGGCAGTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: RFLLCLAVGKGRHGKWGKRRRFL*CLAVGK
Trigger: CTTTCCAACTGCCAGACACAAAAGAAACCGCCTCCT...CTTCCCCCATTTCCCATGTCTTCCCTTTCCAACTGCCAGACACAAAAGAAACCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS TCA 90 bp ATGCCAGTGGATGCAGGCGTAGAATCCCACTGGAGAGGTCTGCTTTaGGACTTCTTCATTCTGACTATTGTCCAACCCATGCATAGACTC +
Preference number: 5 (lower is better)
Translates to: MPVDAGVESHWRGLL*DFFILTIVQPMHRL
Trigger: GAGTCTATGCATGGGTTGGACAATAGTCAGAATGAAGAAGTCTCAAAGCAGACCTCTCCAGTGGGATTCTACGCCTGCATCCACTGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CAA 90 bp TCCTCACCTCCAGGCTTCATGGCACTCCTACAGCACAACACATATGATGCCCCTGCTACTGCTATGTTGTaGATTCTGACACACAGAAGA +
Preference number: 5 (lower is better)
Translates to: SSPPGFMALLQHNTYDAPATAML*ILTHRR
Trigger: TCTTCTGTGTGTCAGAATCAACAACATAGCAGTAGC...AGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCATGAAGCCTGGAGGTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CAA 90 bp TCCTCACCTCCAGGCTTCATGGCACTCCTACAGCACAACACATATGATGCCCCTCAGTTGATAATATGCTaGGCTGAGGAGTCAATGTCA +
Preference number: 5 (lower is better)
Translates to: SSPPGFMALLQHNTYDAPQLIIC*AEESMS
Trigger: TGACATTGACTCCTCAGCCAAGCATATTATCAACTG...AGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCATGAAGCCTGGAGGTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CAA 90 bp TGGCACTCCTACAGCACAACACATATGATGCCCCTGGAGCTGTGCAGAAGGCTGGGTAACTTTGTCATTTaGGGTCACAAACACATATTC +
Preference number: 5 (lower is better)
Translates to: WHSYSTTHMMPLELCRRLGNFVI*GHKHIF
Trigger: GAATATGTGTTTGTGACCCAAAATGACAAAGTTACC...CAGCCTTCTGCACAGCTCCAGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CAA 90 bp TGGCACTCCTACAGCACAACACATATGATGCCCCTGGAGCTGTGCAGAAGGCTGGATTTAATGAGCAGGTaGAACTTGGTAACTTTGTCA +
Preference number: 5 (lower is better)
Translates to: WHSYSTTHMMPLELCRRLDLMSR*NLVTLS
Trigger: TGACAAAGTTACCAAGTTCAACCTGCTCATTAAATC...CAGCCTTCTGCACAGCTCCAGGGGCATCATATGTGTTGTGCTGTAGGAGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CAA 90 bp CGGTTTCTTTTGTGTCTGGCAGTTGGAAAGGGAAGACATGGGAAATGGGGGAAGTCTGGTTCATGGTCATaGTCAACTGAGCTTTGGATA +
Preference number: 5 (lower is better)
Translates to: RFLLCLAVGKGRHGKWGKSGSWS*STELWI
Trigger: TATCCAAAGCTCAGTTGACAATGACCATGAACCAGA...CTTCCCCCATTTCCCATGTCTTCCCTTTCCAACTGCCAGACACAAAAGAAACCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CAA 90 bp CGGTTTCTTTTGTGTCTGGCAGTTGGAAAGGGAAGACATGGGAAATGGGGGAAGGAACCTATCTCCAGGTaGACTAAACTGCACCATATA +
Preference number: 5 (lower is better)
Translates to: RFLLCLAVGKGRHGKWGKEPISR*TKLHHI
Trigger: TATATGGTGCAGTTTAGTCAACCTGGAGATAGGTTC...CTTCCCCCATTTCCCATGTCTTCCCTTTCCAACTGCCAGACACAAAAGAAACCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS GCA 90 bp CTGGGCTTGGAACAGGTAGAGTTTAGCTTCTTTTCCAACAGCTACTaGTATGTTGTTGATTCTGACACACAGAAGAGCATGGTCACCATG +
Preference number: 5 (lower is better)
Translates to: LGLEQVEFSFFSNSY*YVVDSDTQKSMVTM
Trigger: CATGGTGACCATGCTCTTCTGTGTGTCAGAATCAACAACATAGCAGTAGCTGTTGGAAAAGAAGCTAAACTCTACCTGTTCCAAGCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS GCA 90 bp TTCCACCTGAGAATTCTCCTTGTCATCTTGGCATGTATACTTGTCTaGATAAAACACATGCCACGTTTGTGGAGACGGAATCTGGGACAC +
Preference number: 5 (lower is better)
Translates to: FHLRILLVILACILV*IKHMPRLWRRNLGH
Trigger: GTGTCCCAGATTCCGTCTCCACAAACGTGGCATGTGTTTTATGCAGACAAGTATACATGCCAAGATGACAAGGAGAATTCTCAGGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS CCA 90 bp ATCTTGGCATGTATACTTGTCTGCATAAAACACATGCCACGTTTGTaGAGACGGAATCTGGGACACTGTCAGATTATGTTCGGTCTGGTT +
Preference number: 5 (lower is better)
Translates to: ILACILVCIKHMPRL*RRNLGHCQIMFGLV
Trigger: AACCAGACCGAACATAATCTGACAGTGTCCCAGATTCCGTCTCCACAAACGTGGCATGTGTTTTATGCAGACAAGTATACATGCCAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CAA 90 bp CGGTTTCTTTTGTGTCTGGCAGTTGGAAAGGGAAGACATGGGAAATGGGGGAAGGTAACAGCAATGCAGTaGTCAGAACCTTTAAAATCA +
Preference number: 5 (lower is better)
Translates to: RFLLCLAVGKGRHGKWGKVTAMQ*SEPLKS
Trigger: TGATTTTAAAGGTTCTGACAACTGCATTGCTGTTAC...CTTCCCCCATTTCCCATGTCTTCCCTTTCCAACTGCCAGACACAAAAGAAACCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CAA 90 bp CTTGTGCCTTGTGCCTTGTCTGGCCCTTCCTCTTACAAAAAGAATGCAGATCTGTCAGTGCACTGTTGCTaGCTTAAACACACAGTAAAT +
Preference number: 5 (lower is better)
Translates to: LVPCALSGPSSYKKNADLSVHCC*LKHTVN
Trigger: ATTTACTGTGTGTTTAAGCAAGCAACAGTGCACTGA...CAGATCTGCATTCTTTTTGTAAGAGGAAGGGCCAGACAAGGCACAAGGCACAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CAA 90 bp CGGTTTCTTTTGTGTCTGGCAGTTGGAAAGGGAAGACATGGGAAATGGGGGAAGTTGAACTTGGTAACTTaGTCATTTTGGGTCACAAAC +
Preference number: 5 (lower is better)
Translates to: RFLLCLAVGKGRHGKWGKLNLVT*SFWVTN
Trigger: GTTTGTGACCCAAAATGACAAAGTTACCAAGTTCAA...CTTCCCCCATTTCCCATGTCTTCCCTTTCCAACTGCCAGACACAAAAGAAACCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS TCA 90 bp GGAGGATCCCTGCTAAGTTGTGGTGTGAATGGTAGCTATGATGACTaGTATCTTCAAACTGTTCCCAAAGTAGCAAAACACTCTGTGTCA +
Preference number: 5 (lower is better)
Translates to: GGSLLSCGVNGSYDD*YLQTVPKVAKHSVS
Trigger: TGACACAGAGTGTTTTGCTACTTTGGGAACAGTTTGAAGATATCAGTCATCATAGCTACCATTCACACCACAACTTAGCAGGGATCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CAA 90 bp CTTGTGCCTTGTGCCTTGTCTGGCCCTTCCTCTTACAAAAAGAATGCAGATCTGGGAACTTTTTCAGCATaGCCTTCATTCACTCAAAAA +
Preference number: 5 (lower is better)
Translates to: LVPCALSGPSSYKKNADLGTFSA*PSFTQK
Trigger: TTTTTGAGTGAATGAAGGCAATGCTGAAAAAGTTCC...CAGATCTGCATTCTTTTTGTAAGAGGAAGGGCCAGACAAGGCACAAGGCACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CAA 90 bp CTTGTGCCTTGTGCCTTGTCTGGCCCTTCCTCTTACAAAAAGAATGCAGATCTGAGGCTACAGAATAAATaGCTGAATGTGCAAAAGTCT +
Preference number: 5 (lower is better)
Translates to: LVPCALSGPSSYKKNADLRLQNK*LNVQKS
Trigger: AGACTTTTGCACATTCAGCAATTTATTCTGTAGCCT...CAGATCTGCATTCTTTTTGTAAGAGGAAGGGCCAGACAAGGCACAAGGCACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS GCA 90 bp TCAACTGAGCTTTGGATAATTTTTCACTACAGCTATAACCATGACTaGTTTGCTGTAGCTTTAGCCATTCCTGGGCTTGGAACAGGTAGA +
Preference number: 5 (lower is better)
Translates to: STELWIIFHYSYNHD*FAVALAIPGLGTGR
Trigger: TCTACCTGTTCCAAGCCCAGGAATGGCTAAAGCTACAGCAAAGCAGTCATGGTTATAGCTGTAGTGAAAAATTATCCAAAGCTCAGTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CAA 90 bp GATGGCAACTACTTAGAATCCAGTGCCAACACGGATTATAACAAATCCAGTGAGAAAGGCCTGAACAGCTaGACAAACAGCAACAGAATA +
Preference number: 5 (lower is better)
Translates to: DGNYLESSANTDYNKSSEKGLNS*TNSNRI
Trigger: TATTCTGTTGCTGTTTGTCAAGCTGTTCAGGCCTTT...CTCACTGGATTTGTTATAATCCGTGTTGGCACTGGATTCTAAGTAGTTGCCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CAA 90 bp GATGTGACTTTACTGGAGATAATAAATAATTACCCTAAAGCAAGCTCTTCTGCCGTGGCTAGCCCCTATTaGAGTCATCTGGTTAGCGTA +
Preference number: 5 (lower is better)
Translates to: DVTLLEIINNYPKASSSAVASPY*SHLVSV
Trigger: TACGCTAACCAGATGACTCAAATAGGGGCTAGCCAC...GGCAGAAGAGCTTGCTTTAGGGTAATTATTTATTATCTCCAGTAAAGTCACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CAA 90 bp GTGGGTTTAACACTCAACACGTTAAGAAAGTCAAATTTCCCTAAATTGCTATGGCAGAAACTAGCAACTTaGGGCATTCCCAGGACCATC +
Preference number: 5 (lower is better)
Translates to: VGLTLNTLRKSNFPKLLWQKLAT*GIPRTI
Trigger: GATGGTCCTGGGAATGCCCAAAGTTGCTAGTTTCTG...CCATAGCAATTTAGGGAAATTTGACTTTCTTAACGTGTTGAGTGTTAAACCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CAA 90 bp GATGGCAACTACTTAGAATCCAGTGCCAACACGGATTATAACAAATCCAGTGAGTTACTTAGAGAGCTATaGCAAGAAATCAAGCTACGG +
Preference number: 5 (lower is better)
Translates to: DGNYLESSANTDYNKSSELLREL*QEIKLR
Trigger: CCGTAGCTTGATTTCTTGCAATAGCTCTCTAAGTAA...CTCACTGGATTTGTTATAATCCGTGTTGGCACTGGATTCTAAGTAGTTGCCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS CCA 90 bp AAATCAAGTATCAGAAATGAGGGCGACTTTTGTGTCCAGATGATATaGTCAGTGGTAGTGTTACTGAAGAAAGTGAAGAAACTTCCCAGT +
Preference number: 5 (lower is better)
Translates to: KSSIRNEGDFCVQMI*SVVVLLKKVKKLPS
Trigger: ACTGGGAAGTTTCTTCACTTTCTTCAGTAACACTACCACTGACCATATCATCTGGACACAAAAGTCGCCCTCATTTCTGATACTTGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CAA 90 bp GATGGCAACTACTTAGAATCCAGTGCCAACACGGATTATAACAAATCCAGTGAGAATAACCTTGTCTCTTaGGTAGTCGCTAAAAATGAC +
Preference number: 5 (lower is better)
Translates to: DGNYLESSANTDYNKSSENNLVS*VVAKND
Trigger: GTCATTTTTAGCGACTACCAAAGAGACAAGGTTATT...CTCACTGGATTTGTTATAATCCGTGTTGGCACTGGATTCTAAGTAGTTGCCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CAA 90 bp GATGGCAACTACTTAGAATCCAGTGCCAACACGGATTATAACAAATCCAGTGAGGAGATGATCTCAGATTaGTGTATCTCCTATGTTCAT +
Preference number: 5 (lower is better)
Translates to: DGNYLESSANTDYNKSSEEMISD*CISYVH
Trigger: ATGAACATAGGAGATACACAAATCTGAGATCATCTC...CTCACTGGATTTGTTATAATCCGTGTTGGCACTGGATTCTAAGTAGTTGCCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CAA 90 bp GTGGGTTTAACACTCAACACGTTAAGAAAGTCAAATTTCCCTAAATTGCTATGGGGATCATCAGGATATTaGCAATGGCTTCTGACACCA +
Preference number: 5 (lower is better)
Translates to: VGLTLNTLRKSNFPKLLWGSSGY*QWLLTP
Trigger: TGGTGTCAGAAGCCATTGCAAATATCCTGATGATCC...CCATAGCAATTTAGGGAAATTTGACTTTCTTAACGTGTTGAGTGTTAAACCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CAA 90 bp GTGGGTTTAACACTCAACACGTTAAGAAAGTCAAATTTCCCTAAATTGCTATGGACAGCTACTGCTATGTaGTTGATTCTGACACACAGA +
Preference number: 5 (lower is better)
Translates to: VGLTLNTLRKSNFPKLLWTATAM*LILTHR
Trigger: TCTGTGTGTCAGAATCAACAACATAGCAGTAGCTGT...CCATAGCAATTTAGGGAAATTTGACTTTCTTAACGTGTTGAGTGTTAAACCCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CAA 90 bp GATGTGACTTTACTGGAGATAATAAATAATTACCCTAAAGCAAGCTCTTCTGCCCAGATCATATGGGCCTaGCAGAACATAGTAATGAGT +
Preference number: 5 (lower is better)
Translates to: DVTLLEIINNYPKASSSAQIIWA*QNIVMS
Trigger: ACTCATTACTATGTTCTGCAAGGCCCATATGATCTG...GGCAGAAGAGCTTGCTTTAGGGTAATTATTTATTATCTCCAGTAAAGTCACATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CAA 90 bp GTGGGTTTAACACTCAACACGTTAAGAAAGTCAAATTTCCCTAAATTGCTATGGTGCCTCTGTGAGAATTaGAGAAATCCTCTCGTAACT +
Preference number: 5 (lower is better)
Translates to: VGLTLNTLRKSNFPKLLWCLCEN*RNPLVT
Trigger: AGTTACGAGAGGATTTCTCAAATTCTCACAGAGGCA...CCATAGCAATTTAGGGAAATTTGACTTTCTTAACGTGTTGAGTGTTAAACCCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CAA 90 bp GTGGGTTTAACACTCAACACGTTAAGAAAGTCAAATTTCCCTAAATTGCTATGGATGAGCAGGTTGAACTaGGTAACTTTGTCATTTTGG +
Preference number: 5 (lower is better)
Translates to: VGLTLNTLRKSNFPKLLWMSRLN*VTLSFW
Trigger: CCAAAATGACAAAGTTACCAAGTTCAACCTGCTCAT...CCATAGCAATTTAGGGAAATTTGACTTTCTTAACGTGTTGAGTGTTAAACCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CAA 90 bp GATGTGACTTTACTGGAGATAATAAATAATTACCCTAAAGCAAGCTCTTCTGCCATAGGCAAGGTATTATaGAAGTCACTACGGGTACTT +
Preference number: 5 (lower is better)
Translates to: DVTLLEIINNYPKASSSAIGKVL*KSLRVL
Trigger: AAGTACCCGTAGTGACTTCAATAATACCTTGCCTAT...GGCAGAAGAGCTTGCTTTAGGGTAATTATTTATTATCTCCAGTAAAGTCACATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CAA 90 bp GATGTGACTTTACTGGAGATAATAAATAATTACCCTAAAGCAAGCTCTTCTGCCTTTCGTACTAGTTTCTaGGATCACTATGGGAAAACC +
Preference number: 5 (lower is better)
Translates to: DVTLLEIINNYPKASSSAFRTSF*DHYGKT
Trigger: GGTTTTCCCATAGTGATCCAAGAAACTAGTACGAAA...GGCAGAAGAGCTTGCTTTAGGGTAATTATTTATTATCTCCAGTAAAGTCACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CAA 90 bp GTGGGTTTAACACTCAACACGTTAAGAAAGTCAAATTTCCCTAAATTGCTATGGTTTTCGCATACTTCTTaGAGGCTACTGAACATAACT +
Preference number: 5 (lower is better)
Translates to: VGLTLNTLRKSNFPKLLWFSHTS*RLLNIT
Trigger: AGTTATGTTCAGTAGCCTCAAAGAAGTATGCGAAAA...CCATAGCAATTTAGGGAAATTTGACTTTCTTAACGTGTTGAGTGTTAAACCCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS-3UTR CAA 90 bp TTATTAGCGAGACATGATAAAAGAAAAGGTTATGACCACTCAGACGATCATGTACTGTTAAGTACAGATTaGGAACTTTTTCAGCATTGC +
Preference number: 5 (lower is better)
Translates to: LLARHDKRKGYDHSDDHVLLSTD*ELFQHC
Trigger: GCAATGCTGAAAAAGTTCCAAATCTGTACTTAACAG...TACATGATCGTCTGAGTGGTCATAACCTTTTCTTTTATCATGTCTCGCTAATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS TCA 72 bp TGCGCTGGCCCTGGGCGTCCTGGGCCGCGGTGCTGCTaGAGCTGCCCCGCAGGGTCTTACCCTGGCTGCCCT +
Preference number: 6 (lower is better)
Translates to: CAGPGRPGPRCC*SCPAGSYPGCP
Trigger: AGGGCAGCCAGGGTAAGACCCTGCGGGGCAGCTTCAGCAGCACCGCGGCCCAGGACGCCCAGGGCCAGCGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS GCA 72 bp CTGAAGCTGCCCCGCAGGGTCTTACCCTGGCTGCCCTaGGGCCACCAGCAGCACGTGAGGGCCACAGCCAGC +
Preference number: 6 (lower is better)
Translates to: LKLPRRVLPWLP*GHQQHVRATAS
Trigger: GCTGGCTGTGGCCCTCACGTGCTGCTGGTGGCCGCAGGGCAGCCAGGGTAAGACCCTGCGGGGCAGCTTCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS GCA 72 bp GAAGAGCATGGTCACCATGGAACTCGAAGTGGCCGATaGGCTGGCCCTGGGCGTCCTGGGCCGCGGTGCTGC +
Preference number: 6 (lower is better)
Translates to: EEHGHHGTRSGR*AGPGRPGPRCC
Trigger: GCAGCACCGCGGCCCAGGACGCCCAGGGCCAGCGCATCGGCCACTTCGAGTTCCATGGTGACCATGCTCTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS TCA 72 bp GATGCAGGCGTAGAATCCCACTGGAGAGGTCTGCTTTaGGACTTCTTCATTCTGACTATTGTCCAACCCATG +
Preference number: 6 (lower is better)
Translates to: DAGVESHWRGLL*DFFILTIVQPM
Trigger: CATGGGTTGGACAATAGTCAGAATGAAGAAGTCTCAAAGCAGACCTCTCCAGTGGGATTCTACGCCTGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS TCA 72 bp CCCACTGGAGAGGTCTGCTTTGAGACTTCTTCATTCTaGCTATTGTCCAACCCATGCATAGACTCAAAAGTA +
Preference number: 6 (lower is better)
Translates to: PTGEVCFETSSF*LLSNPCIDSKV
Trigger: TACTTTTGAGTCTATGCATGGGTTGGACAATAGTCAGAATGAAGAAGTCTCAAAGCAGACCTCTCCAGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS GCA 72 bp AACAGCAATGCAGTTGTCAGAACCTTTAAAATCATGTaGATGGGTCCGCCTTTCTTAATAGCCTGCCACAAT +
Preference number: 6 (lower is better)
Translates to: NSNAVVRTFKIM*MGPPFLIACHN
Trigger: ATTGTGGCAGGCTATTAAGAAAGGCGGACCCATGCACATGATTTTAAAGGTTCTGACAACTGCATTGCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS CCA 72 bp TGTATACTTGTCTGCATAAAACACATGCCACGTTTGTaGAGACGGAATCTGGGACACTGTCAGATTATGTTC +
Preference number: 6 (lower is better)
Translates to: CILVCIKHMPRL*RRNLGHCQIMF
Trigger: GAACATAATCTGACAGTGTCCCAGATTCCGTCTCCACAAACGTGGCATGTGTTTTATGCAGACAAGTATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS CAA 72 bp AGTTTAGCTTCTTTTCCAACAGCTACTGCTATGTTGTaGATTCTGACACACAGAAGAGCATGGTCACCATGG +
Preference number: 6 (lower is better)
Translates to: SLASFPTATAML*ILTHRRAWSPW
Trigger: CCATGGTGACCATGCTCTTCTGTGTGTCAGAATCAACAACATAGCAGTAGCTGTTGGAAAAGAAGCTAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS GCA 72 bp GAACAGGTAGAGTTTAGCTTCTTTTCCAACAGCTACTaGTATGTTGTTGATTCTGACACACAGAAGAGCATG +
Preference number: 6 (lower is better)
Translates to: EQVEFSFFSNSY*YVVDSDTQKSM
Trigger: CATGCTCTTCTGTGTGTCAGAATCAACAACATAGCAGTAGCTGTTGGAAAAGAAGCTAAACTCTACCTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS GCA 72 bp CTTTGGATAATTTTTCACTACAGCTATAACCATGACTaGTTTGCTGTAGCTTTAGCCATTCCTGGGCTTGGA +
Preference number: 6 (lower is better)
Translates to: LWIIFHYSYNHD*FAVALAIPGLG
Trigger: TCCAAGCCCAGGAATGGCTAAAGCTACAGCAAAGCAGTCATGGTTATAGCTGTAGTGAAAAATTATCCAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS GCA 72 bp AGAATTCTCCTTGTCATCTTGGCATGTATACTTGTCTaGATAAAACACATGCCACGTTTGTGGAGACGGAAT +
Preference number: 6 (lower is better)
Translates to: RILLVILACILV*IKHMPRLWRRN
Trigger: ATTCCGTCTCCACAAACGTGGCATGTGTTTTATGCAGACAAGTATACATGCCAAGATGACAAGGAGAATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS CAA 72 bp TGGGATATCTTCCACCTGAGAATTCTCCTTGTCATCTaGGCATGTATACTTGTCTGCATAAAACACATGCCA +
Preference number: 6 (lower is better)
Translates to: WDIFHLRILLVI*ACILVCIKHMP
Trigger: TGGCATGTGTTTTATGCAGACAAGTATACATGCCAAGATGACAAGGAGAATTCTCAGGTGGAAGATATCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS CCA 72 bp ATCAGAAATGAGGGCGACTTTTGTGTCCAGATGATATaGTCAGTGGTAGTGTTACTGAAGAAAGTGAAGAAA +
Preference number: 6 (lower is better)
Translates to: IRNEGDFCVQMI*SVVVLLKKVKK
Trigger: TTTCTTCACTTTCTTCAGTAACACTACCACTGACCATATCATCTGGACACAAAAGTCGCCCTCATTTCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS CCA 72 bp TCGCTAAAAATGACAGAAATGCATGCAAGAACTGGATaGCATAAAAACCACAAGATACAGCCTTTGGCAAAT +
Preference number: 6 (lower is better)
Translates to: SLKMTEMHARTG*HKNHKIQPLAN
Trigger: ATTTGCCAAAGGCTGTATCTTGTGGTTTTTATGCCATCCAGTTCTTGCATGCATTTCTGTCATTTTTAGCGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376958.5
CDS TCA 72 bp TTTAGTAACACCATTTCAAATGGGATATCTTCCACCTaGGAATTCTCCTTGTCATCTTGGCATGTATACTTG +
Preference number: 6 (lower is better)
Translates to: FSNTISNGISST*EFSLSSWHVYL
Trigger: CAAGTATACATGCCAAGATGACAAGGAGAATTCTCAGGTGGAAGATATCCCATTTGAAATGGTGTTACTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376958.5