Pregenerated sensors for GPR18 (Homo sapiens)
Ensembl gene IDs: ENSG00000125245Ensembl transcript IDs: ENST00000340807.3, ENST00000397470.5, ENST00000397473.7, ENST00000416594.2, ENST00000678933.1
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTCAGTCCTGGAACCACTaGAGTCCCATGGGACCCCAG | + |
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Preference number: 4 (lower is better) Translates to: YRISIDARVVSEVNFDGIQSWNH*SPMGPQ Trigger: CTGGGGTCCCATGGGACTTCAGTGGTTCCAGGACTG...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340807.3 ENST00000416594.2 |
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| CDS-3UTR GCA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTAAGCAGACGAGCACCTaGACCAGCAGCGTGATGATG | + |
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Preference number: 4 (lower is better) Translates to: YRISIDARVVSEVNFDGIKQTST*TSSVMM Trigger: CATCATCACGCTGCTGGTGCAGGTGCTCGTCTGCTT...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR CCA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTTTCCAGTGTAACGCTTaGCGTCGGAGTTGGTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: YRISIDARVVSEVNFDGIFQCNA*RRSWCW Trigger: CCAGCACCAACTCCGACGCCAAGCGTTACACTGGAA...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR CCA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTGCAGAGGGGTGGTCGTaGTCAGGGTCATTATCCAGA | + |
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Preference number: 4 (lower is better) Translates to: YRISIDARVVSEVNFDGIAEGWS*SGSLSR Trigger: TCTGGATAATGACCCTGACCACGACCACCCCTCTGC...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR CCA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTGCAGTAGCAGAGGGGTaGTCGTGGTCAGGGTCATTA | + |
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Preference number: 4 (lower is better) Translates to: YRISIDARVVSEVNFDGIAVAEG*SWSGSL Trigger: TAATGACCCTGACCACGACCACCCCTCTGCTACTGC...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR CCA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTGGCAGGTGGCGGGAGTaGAGTCTTTATCTGGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: YRISIDARVVSEVNFDGIGRWRE*SLYLGL Trigger: AAGACCCAGATAAAGACTCCACTCCCGCCACCTGCC...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR GCA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTTGGCGTCGGAGTTGGTaGTGGGCTGACTTTAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: YRISIDARVVSEVNFDGIWRRSW*WADFNC Trigger: GCAATTAAAGTCAGCCCAGCACCAACTCCGACGCCA...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR CCA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTCGTCGGAGTTGGTGCTaGGCTGACTTTAATTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: YRISIDARVVSEVNFDGIRRSWC*ADFNCC Trigger: GCAGCAATTAAAGTCAGCCCAGCACCAACTCCGACG...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR CCA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTGCTTGGCGTCGGAGTTaGTGCTGGGCTGACTTTAAT | + |
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Preference number: 4 (lower is better) Translates to: YRISIDARVVSEVNFDGIAWRRS*CWADFN Trigger: ATTAAAGTCAGCCCAGCACCAACTCCGACGCCAAGC...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR CCA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTGCTGCTCTACTTCAGTaGTTCACAGAAAGCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: YRISIDARVVSEVNFDGIAALLQ*FTESST Trigger: GGTGCTGCTTTCTGTGAACCACTGAAGTAGAGCAGC...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR TCA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTAAAATGTCAGTCGAGTaGGGTTCAGCACGTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: YRISIDARVVSEVNFDGIKMSVE*GSARSQ Trigger: CTGTGAACGTGCTGAACCTCACTCGACTGACATTTT...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR CCA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTACTTCGGCTGTACAATaGCCATGTATCTGTCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: YRISIDARVVSEVNFDGITSAVQ*PCICQH Trigger: GTGCTGACAGATACATGGCCATTGTACAGCCGAAGT...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR TCA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTGGCTTTTTCACCTTATaGCTTTACCCTGGATGTGGT | + |
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Preference number: 4 (lower is better) Translates to: YRISIDARVVSEVNFDGIGFFTL*LYPGCG Trigger: ACCACATCCAGGGTAAAGTCATAAGGTGAAAAAGCC...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000340807.3 ENST00000416594.2 |
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| CDS-3UTR TCA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTAGTCTGTGTGAGAGATaGGCATTTTTCAGCACTTCC | + |
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Preference number: 4 (lower is better) Translates to: YRISIDARVVSEVNFDGISLCER*AFFSTS Trigger: GGAAGTGCTGAAAAATGCTCATCTCTCACACAGACT...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR TCA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTGTATTCATCTGGATGTaGGCTGTTAAAAGGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: YRISIDARVVSEVNFDGIVFIWM*AVKRDR Trigger: CCTGTCCCTTTTAACAGCTCACATCCAGATGAATAC...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR TCA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTGTCTTCCAGGTTTTGTaGTTTCAGCTGCTCTACTTC | + |
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Preference number: 4 (lower is better) Translates to: YRISIDARVVSEVNFDGIVFQVL*FQLLYF Trigger: GAAGTAGAGCAGCTGAAATCACAAAACCTGGAAGAC...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR CCA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTAAAGCGAAACAGATGTaGAAGGGCATAAAGCAGACG | + |
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Preference number: 4 (lower is better) Translates to: YRISIDARVVSEVNFDGIKAKQM*KGIKQT Trigger: CGTCTGCTTTATGCCCTTCCACATCTGTTTCGCTTT...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR TCA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTTCAGGAAGTGCTCTCTaGAATAGGCTTTTTCACCTT | + |
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Preference number: 4 (lower is better) Translates to: YRISIDARVVSEVNFDGISGSAL*NRLFHL Trigger: AAGGTGAAAAAGCCTATTTCAGAGAGCACTTCCTGA...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000340807.3 ENST00000416594.2 |
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| CDS-3UTR GCA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTTGGGCTGACTTTAATTaGTGCTTTGTCTCTTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YRISIDARVVSEVNFDGIWADFN*CFVSFR Trigger: CCTGAAAGAGACAAAGCAGCAATTAAAGTCAGCCCA...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340807.3 ENST00000416594.2 |
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| CDS-3UTR CCA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTTATAGATGGTTACCGTaGTTCTCTTCTTGGTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: YRISIDARVVSEVNFDGIYRWLP*FSSWWY Trigger: GTACCACCAAGAAGAGAACCACGGTAACCATCTATA...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR CCA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTAGAGCTCCAAGAATCTaGCAGAAGTACTCTCCAAAT | + |
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Preference number: 4 (lower is better) Translates to: YRISIDARVVSEVNFDGIRAPRI*QKYSPN Trigger: ATTTGGAGAGTACTTCTGCCAGATTCTTGGAGCTCT...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR TCA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTTCAGTTTGTGTACTTTaGTGCTTGAAGTCTGCATCA | + |
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Preference number: 4 (lower is better) Translates to: YRISIDARVVSEVNFDGISVCVL*CLKSAS Trigger: TGATGCAGACTTCAAGCATCAAAGTACACAAACTGA...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340807.3 ENST00000416594.2 |
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| CDS-3UTR TCA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTCATCAAAAGTCTGTGTaGGAGATGAGCATTTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: YRISIDARVVSEVNFDGIHQKSV*EMSIFQ Trigger: CTGAAAAATGCTCATCTCTCACACAGACTTTTGATG...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR TCA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTCTTGATTGTTCAGGGTaGTCATTTTACAGCTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: YRISIDARVVSEVNFDGILDCSG*SFYSLL Trigger: CAACAAGCTGTAAAATGATCACCCTGAACAATCAAG...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR TCA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTCTAATGACTCGAGCCTaGAATTGTTTTGAAACGATG | + |
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Preference number: 4 (lower is better) Translates to: YRISIDARVVSEVNFDGILMTRA*NCFETM Trigger: CATCGTTTCAAAACAATTTCAGGCTCGAGTCATTAG...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR GCA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTAACTTTTTCTGCGCATaGTTCGAAGGTAATTACGGT | + |
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Preference number: 4 (lower is better) Translates to: YRISIDARVVSEVNFDGINFFCA*FEGNYG Trigger: ACCGTAATTACCTTCGAAGCATGCGCAGAAAAAGTT...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR GCA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTTTTTGTGATTTCAGCTaGTCTACTTCAGTGGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: YRISIDARVVSEVNFDGIFCDFS*STSVVH Trigger: GTGAACCACTGAAGTAGAGCAGCTGAAATCACAAAA...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR CCA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTTTTCTAGTGCACAATTaGGAGTACGTAAAGCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: YRISIDARVVSEVNFDGIFLVHN*EYVKPS Trigger: ACTTGGCTTTACGTACTCCCAATTGTGCACTAGAAA...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR TCA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTGTGTACTTTGATGCTTaGAGTCTGCATCATCATATA | + |
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Preference number: 4 (lower is better) Translates to: YRISIDARVVSEVNFDGIVYFDA*SLHHHI Trigger: TATATGATGATGCAGACTTCAAGCATCAAAGTACAC...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340807.3 ENST00000416594.2 |
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| CDS-3UTR TCA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTAGCATAAGCTCCCCTTaGAATGATGGCATATATTTA | + |
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Preference number: 4 (lower is better) Translates to: YRISIDARVVSEVNFDGISISSP*NDGIYL Trigger: TAAATATATGCCATCATTTCAAGGGGAGCTTATGCT...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340807.3 ENST00000416594.2 |
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| CDS-3UTR GCA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTATAGAAGACAAGGGCTaGAATTTTGTATTCATCTGG | + |
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Preference number: 4 (lower is better) Translates to: YRISIDARVVSEVNFDGIIEDKG*NFVFIW Trigger: CCAGATGAATACAAAATTGCAGCCCTTGTCTTCTAT...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR CCA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTCTTATGACTTTACCCTaGATGTGGTTTTTCTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: YRISIDARVVSEVNFDGILMTLP*MWFFSF Trigger: GAAAGAGAAAAACCACATCCAGGGTAAAGTCATAAG...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000340807.3 ENST00000416594.2 |
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| CDS-3UTR GCA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTTTTCACTGTTTATATTaGTTAGTGACCGTAGACTAC | + |
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Preference number: 4 (lower is better) Translates to: YRISIDARVVSEVNFDGIFHCLY*LVTVDY Trigger: GTAGTCTACGGTCACTAAGCAATATAAACAGTGAAA...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR CCA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTACTTTACCCTGGATGTaGTTTTTCTCTTTCACAAAT | + |
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Preference number: 4 (lower is better) Translates to: YRISIDARVVSEVNFDGITLPWM*FFSFTN Trigger: ATTTGTGAAAGAGAAAAACCACATCCAGGGTAAAGT...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000340807.3 ENST00000416594.2 |
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| CDS CCA 90 bp | TGCCATCCGAAGCTGGGCTGGTTTCTCTGCCCTCCGAAGCTGGGCTaGTTGTTCATCCCTGCAGGTTTCCTTAGCACTTGGTACCTATCC | + |
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Preference number: 5 (lower is better) Translates to: CHPKLGWFLCPPKLG*LFIPAGFLSTWYLS Trigger: GGATAGGTACCAAGTGCTAAGGAAACCTGCAGGGATGAACAACCAGCCCAGCTTCGGAGGGCAGAGAAACCAGCCCAGCTTCGGATGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678933.1 |
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| CDS CCA 90 bp | TTCTCTGCCATCCGAAGCTGGGCTGGTTTCTCTGCCCTCCGAAGCTaGGCTGGTTGTTCATCCCTGCAGGTTTCCTTAGCACTTGGTACC | + |
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Preference number: 5 (lower is better) Translates to: FSAIRSWAGFSALRS*AGCSSLQVSLALGT Trigger: GGTACCAAGTGCTAAGGAAACCTGCAGGGATGAACAACCAGCCCAGCTTCGGAGGGCAGAGAAACCAGCCCAGCTTCGGATGGCAGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678933.1 |
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| CDS GCA 90 bp | TTTTCAGGAAGCTTTCTCTGCCATCCGAAGCTGGGCTGGTTTCTCTaGCCTCCGAAGCTGGGCTGGTTGTTCATCCCTGCAGGTTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: FSGSFLCHPKLGWFL*PPKLGWLFIPAGFL Trigger: AAGGAAACCTGCAGGGATGAACAACCAGCCCAGCTTCGGAGGGCAGAGAAACCAGCCCAGCTTCGGATGGCAGAGAAAGCTTCCTGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000678933.1 |
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| CDS CCA 90 bp | GCATCATCTTTTTCAGGAAGCTTTCTCTGCCATCCGAAGCTGGGCTaGTTTCTCTGCCCTCCGAAGCTGGGCTGGTTGTTCATCCCTGCA | + |
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Preference number: 5 (lower is better) Translates to: ASSFSGSFLCHPKLG*FLCPPKLGWLFIPA Trigger: TGCAGGGATGAACAACCAGCCCAGCTTCGGAGGGCAGAGAAACCAGCCCAGCTTCGGATGGCAGAGAAAGCTTCCTGAAAAAGATGATGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000678933.1 |
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| CDS CCA 90 bp | AGTCTTTATCTGGGTCTTTATAGAGCAGTAGCAGAGGGGTGGTCGTaGTCAGGGTCATTATCCAGACTCCCACACACGCCAGCACGGCTT | + |
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Preference number: 5 (lower is better) Translates to: SLYLGLYRAVAEGWS*SGSLSRLPHTPARL Trigger: AAGCCGTGCTGGCGTGTGTGGGAGTCTGGATAATGACCCTGACCACGACCACCCCTCTGCTACTGCTCTATAAAGACCCAGATAAAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS CCA 90 bp | GAGTGGAGTCTTTATCTGGGTCTTTATAGAGCAGTAGCAGAGGGGTaGTCGTGGTCAGGGTCATTATCCAGACTCCCACACACGCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: EWSLYLGLYRAVAEG*SWSGSLSRLPHTPA Trigger: TGCTGGCGTGTGTGGGAGTCTGGATAATGACCCTGACCACGACCACCCCTCTGCTACTGCTCTATAAAGACCCAGATAAAGACTCCACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS CCA 90 bp | AGTCTGCATCATCTTTTTCAGGAAGCTTTCTCTGCCATCCGAAGCTaGGCTGGTTTCTCTGCCCTCCGAAGCTGGGCTGGTTGTTCATCC | + |
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Preference number: 5 (lower is better) Translates to: SLHHLFQEAFSAIRS*AGFSALRSWAGCSS Trigger: GGATGAACAACCAGCCCAGCTTCGGAGGGCAGAGAAACCAGCCCAGCTTCGGATGGCAGAGAAAGCTTCCTGAAAAAGATGATGCAGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000678933.1 |
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| CDS GCA 90 bp | AGGAAAGCGAAACAGATGTGGAAGGGCATAAAGCAGACGAGCACCTaGACCAGCAGCGTGATGATGATCCTTATGGACTTCTCCTTGACT | + |
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Preference number: 5 (lower is better) Translates to: RKAKQMWKGIKQTST*TSSVMMILMDFSLT Trigger: AGTCAAGGAGAAGTCCATAAGGATCATCATCACGCTGCTGGTGCAGGTGCTCGTCTGCTTTATGCCCTTCCACATCTGTTTCGCTTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS TCA 90 bp | CACAGAAAGCAGCACCTCCTGTCCATCAAAAGTCTGTGTGAGAGATaGGCATTTTTCAGCACTTCCACTTCTGTCGAAGGGATATCTTTG | + |
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Preference number: 5 (lower is better) Translates to: HRKQHLLSIKSLCER*AFFSTSTSVEGISL Trigger: CAAAGATATCCCTTCGACAGAAGTGGAAGTGCTGAAAAATGCTCATCTCTCACACAGACTTTTGATGGACAGGAGGTGCTGCTTTCTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000397473.7 ENST00000416594.2 |
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| CDS CCA 90 bp | GTTGCTTTAAAAAGTAGTTTCCAGTGTAACGCTTGGCGTCGGAGTTaGTGCTGGGCTGACTTTAATTGCTGCTTTGTCTCTTTCAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: VALKSSFQCNAWRRS*CWADFNCCFVSFRK Trigger: CTTCCTGAAAGAGACAAAGCAGCAATTAAAGTCAGCCCAGCACCAACTCCGACGCCAAGCGTTACACTGGAAACTACTTTTTAAAGCAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000340807.3 ENST00000416594.2 |
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| CDS CCA 90 bp | TTAGACTCTTTTGTTGCTTTAAAAAGTAGTTTCCAGTGTAACGCTTaGCGTCGGAGTTGGTGCTGGGCTGACTTTAATTGCTGCTTTGTC | + |
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Preference number: 5 (lower is better) Translates to: LDSFVALKSSFQCNA*RRSWCWADFNCCFV Trigger: GACAAAGCAGCAATTAAAGTCAGCCCAGCACCAACTCCGACGCCAAGCGTTACACTGGAAACTACTTTTTAAAGCAACAAAAGAGTCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000340807.3 ENST00000416594.2 |
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| CDS-3UTR CAA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTATGATGTCAGAAATCTaGAGGCAGGTGGCGGGAGTG | + |
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Preference number: 5 (lower is better) Translates to: YRISIDARVVSEVNFDGIMMSEI*RQVAGV Trigger: CACTCCCGCCACCTGCCTCAAGATTTCTGACATCAT...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR CAA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTCACGCCAGCACGGCTTaGCACGTGTTTTTAAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: YRISIDARVVSEVNFDGIHASTA*HVFLSS Trigger: AGAACTTAAAAACACGTGCAAAGCCGTGCTGGCGTG...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR CAA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTACCGTGGTTCTCTTCTaGGTGGTACAACTGAAAACC | + |
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Preference number: 5 (lower is better) Translates to: YRISIDARVVSEVNFDGITVVLF*VVQLKT Trigger: GGTTTTCAGTTGTACCACCAAGAAGAGAACCACGGT...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR CAA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTGACTTCTCCTTGACTTaGGGTTTCAGCTTAGACGTC | + |
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Preference number: 5 (lower is better) Translates to: YRISIDARVVSEVNFDGIDFSLT*GFSLDV Trigger: GACGTCTAAGCTGAAACCCAAAGTCAAGGAGAAGTC...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR CAA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTAGGGACAGGTTGATCTaGATTGTTCAGGGTGATCAT | + |
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Preference number: 5 (lower is better) Translates to: YRISIDARVVSEVNFDGIRDRLI*IVQGDH Trigger: ATGATCACCCTGAACAATCAAGATCAACCTGTCCCT...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR CAA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTACAAGGGCTGCAATTTaGTATTCATCTGGATGTGAG | + |
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Preference number: 5 (lower is better) Translates to: YRISIDARVVSEVNFDGITRAAI*YSSGCE Trigger: CTCACATCCAGATGAATACAAAATTGCAGCCCTTGT...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR CAA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTGTGTTTTTAAGTTCTTaGGCGTACTTCGGCTGTACA | + |
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Preference number: 5 (lower is better) Translates to: YRISIDARVVSEVNFDGIVFLSS*AYFGCT Trigger: TGTACAGCCGAAGTACGCCAAAGAACTTAAAAACAC...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR CAA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTCTTATGGACTTCTCCTaGACTTTGGGTTTCAGCTTA | + |
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Preference number: 5 (lower is better) Translates to: YRISIDARVVSEVNFDGILMDFS*TLGFSL Trigger: TAAGCTGAAACCCAAAGTCAAGGAGAAGTCCATAAG...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR CAA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTTTTTCTAGTGCACAATaGGGAGTACGTAAAGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: YRISIDARVVSEVNFDGIFSSAQ*GVRKAK Trigger: CTTGGCTTTACGTACTCCCAATTGTGCACTAGAAAA...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR CAA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTAGAAACAGCAATGTTTaGTGTCATGGTCAGCAGATC | + |
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Preference number: 5 (lower is better) Translates to: YRISIDARVVSEVNFDGIRNSNV*CHGQQI Trigger: GATCTGCTGACCATGACACAAAACATTGCTGTTTCT...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR CAA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTTTCAGTTTGTGTACTTaGATGCTTGAAGTCTGCATC | + |
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Preference number: 5 (lower is better) Translates to: YRISIDARVVSEVNFDGIFSLCT*MLEVCI Trigger: GATGCAGACTTCAAGCATCAAAGTACACAAACTGAA...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340807.3 ENST00000416594.2 |
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| CDS-3UTR CAA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTACTTTAATTGCTGCTTaGTCTCTTTCAGGAAGTGCT | + |
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Preference number: 5 (lower is better) Translates to: YRISIDARVVSEVNFDGITLIAA*SLSGSA Trigger: AGCACTTCCTGAAAGAGACAAAGCAGCAATTAAAGT...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340807.3 ENST00000416594.2 |
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| CDS-3UTR CAA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTTCATTTTACAGCTTGTaGGTAGGCATGATACTTAGA | + |
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Preference number: 5 (lower is better) Translates to: YRISIDARVVSEVNFDGISFYSL*VGMILR Trigger: TCTAAGTATCATGCCTACCAACAAGCTGTAAAATGA...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS-3UTR CAA 90 bp | TACAGAATATCCATTGACGCCAGAGTAGTTAGTGAAGTGAATTTTGATGGGATTGAGCCTGAAATTGTTTaGAAACGATGTAGTAGAGAA | + |
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Preference number: 5 (lower is better) Translates to: YRISIDARVVSEVNFDGIEPEIV*KRCSRE Trigger: TTCTCTACTACATCGTTTCAAAACAATTTCAGGCTC...AATCCCATCAAAATTCACTTCACTAACTACTCTGGCGTCAATGGATATTCTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS CCA 72 bp | TCCCCCGTTCCCAGCATCAGGAAAGCGAAACAGATGTaGAAGGGCATAAAGCAGACGAGCACCTGCACCAGC | + |
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Preference number: 6 (lower is better) Translates to: SPVPSIRKAKQM*KGIKQTSTCTS Trigger: GCTGGTGCAGGTGCTCGTCTGCTTTATGCCCTTCCACATCTGTTTCGCTTTCCTGATGCTGGGAACGGGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS CCA 72 bp | AAGCTGGGCTGGTTTCTCTGCCCTCCGAAGCTGGGCTaGTTGTTCATCCCTGCAGGTTTCCTTAGCACTTGG | + |
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Preference number: 6 (lower is better) Translates to: KLGWFLCPPKLG*LFIPAGFLSTW Trigger: CCAAGTGCTAAGGAAACCTGCAGGGATGAACAACCAGCCCAGCTTCGGAGGGCAGAGAAACCAGCCCAGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678933.1 |
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| CDS CCA 72 bp | ATCCGAAGCTGGGCTGGTTTCTCTGCCCTCCGAAGCTaGGCTGGTTGTTCATCCCTGCAGGTTTCCTTAGCA | + |
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Preference number: 6 (lower is better) Translates to: IRSWAGFSALRS*AGCSSLQVSLA Trigger: TGCTAAGGAAACCTGCAGGGATGAACAACCAGCCCAGCTTCGGAGGGCAGAGAAACCAGCCCAGCTTCGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678933.1 |
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| CDS CAA 72 bp | CTGGGCTGGTTTCTCTGCCCTCCGAAGCTGGGCTGGTaGTTCATCCCTGCAGGTTTCCTTAGCACTTGGTAC | + |
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Preference number: 6 (lower is better) Translates to: LGWFLCPPKLGW*FIPAGFLSTWY Trigger: GTACCAAGTGCTAAGGAAACCTGCAGGGATGAACAACCAGCCCAGCTTCGGAGGGCAGAGAAACCAGCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678933.1 |
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| CDS CAA 90 bp | CATCCGAAGCTGGGCTGGTTTCTCTGCCCTCCGAAGCTGGGCTGGTaGTTCATCCCTGCAGGTTTCCTTAGCACTTGGTACCTATCCCAT | + |
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Preference number: 6 (lower is better) Translates to: HPKLGWFLCPPKLGW*FIPAGFLSTWYLSH Trigger: ATGGGATAGGTACCAAGTGCTAAGGAAACCTGCAGGGATGAACAACCAGCCCAGCTTCGGAGGGCAGAGAAACCAGCCCAGCTTCGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678933.1 |
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| CDS CCA 72 bp | CTGGGTCTTTATAGAGCAGTAGCAGAGGGGTGGTCGTaGTCAGGGTCATTATCCAGACTCCCACACACGCCA | + |
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Preference number: 6 (lower is better) Translates to: LGLYRAVAEGWS*SGSLSRLPHTP Trigger: TGGCGTGTGTGGGAGTCTGGATAATGACCCTGACCACGACCACCCCTCTGCTACTGCTCTATAAAGACCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS CCA 72 bp | TTTTCAGGAAGCTTTCTCTGCCATCCGAAGCTGGGCTaGTTTCTCTGCCCTCCGAAGCTGGGCTGGTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: FSGSFLCHPKLG*FLCPPKLGWLF Trigger: GAACAACCAGCCCAGCTTCGGAGGGCAGAGAAACCAGCCCAGCTTCGGATGGCAGAGAAAGCTTCCTGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000678933.1 |
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| CDS CCA 72 bp | CATCTTTTTCAGGAAGCTTTCTCTGCCATCCGAAGCTaGGCTGGTTTCTCTGCCCTCCGAAGCTGGGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: HLFQEAFSAIRS*AGFSALRSWAG Trigger: ACCAGCCCAGCTTCGGAGGGCAGAGAAACCAGCCCAGCTTCGGATGGCAGAGAAAGCTTCCTGAAAAAGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000678933.1 |
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| CDS CAA 90 bp | GTGGTCAGGGTCATTATCCAGACTCCCACACACGCCAGCACGGCTTaGCACGTGTTTTTAAGTTCTTTGGCGTACTTCGGCTGTACAATG | + |
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Preference number: 6 (lower is better) Translates to: VVRVIIQTPTHASTA*HVFLSSLAYFGCTM Trigger: CATTGTACAGCCGAAGTACGCCAAAGAACTTAAAAACACGTGCAAAGCCGTGCTGGCGTGTGTGGGAGTCTGGATAATGACCCTGACCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS GCA 72 bp | TTGAAGTCTGCATCATCTTTTTCAGGAAGCTTTCTCTaGCATCCGAAGCTGGGCTGGTTTCTCTGCCCTCCG | + |
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Preference number: 6 (lower is better) Translates to: LKSASSFSGSFL*HPKLGWFLCPP Trigger: CGGAGGGCAGAGAAACCAGCCCAGCTTCGGATGGCAGAGAAAGCTTCCTGAAAAAGATGATGCAGACTTCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000678933.1 |
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| CDS CCA 72 bp | CTTTATCTGGGTCTTTATAGAGCAGTAGCAGAGGGGTaGTCGTGGTCAGGGTCATTATCCAGACTCCCACAC | + |
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Preference number: 6 (lower is better) Translates to: LYLGLYRAVAEG*SWSGSLSRLPH Trigger: GTGTGGGAGTCTGGATAATGACCCTGACCACGACCACCCCTCTGCTACTGCTCTATAAAGACCCAGATAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS CAA 90 bp | ACTCCCACACACGCCAGCACGGCTTTGCACGTGTTTTTAAGTTCTTaGGCGTACTTCGGCTGTACAATGGCCATGTATCTGTCAGCACTA | + |
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Preference number: 6 (lower is better) Translates to: TPTHASTALHVFLSS*AYFGCTMAMYLSAL Trigger: TAGTGCTGACAGATACATGGCCATTGTACAGCCGAAGTACGCCAAAGAACTTAAAAACACGTGCAAAGCCGTGCTGGCGTGTGTGGGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS GCA 72 bp | AAACAGATGTGGAAGGGCATAAAGCAGACGAGCACCTaGACCAGCAGCGTGATGATGATCCTTATGGACTTC | + |
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Preference number: 6 (lower is better) Translates to: KQMWKGIKQTST*TSSVMMILMDF Trigger: GAAGTCCATAAGGATCATCATCACGCTGCTGGTGCAGGTGCTCGTCTGCTTTATGCCCTTCCACATCTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS CAA 72 bp | CACGCCAGCACGGCTTTGCACGTGTTTTTAAGTTCTTaGGCGTACTTCGGCTGTACAATGGCCATGTATCTG | + |
|
Preference number: 6 (lower is better) Translates to: HASTALHVFLSS*AYFGCTMAMYL Trigger: CAGATACATGGCCATTGTACAGCCGAAGTACGCCAAAGAACTTAAAAACACGTGCAAAGCCGTGCTGGCGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS GCA 72 bp | AGTAGTTTCCAGTGTAACGCTTGGCGTCGGAGTTGGTaGTGGGCTGACTTTAATTGCTGCTTTGTCTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSFQCNAWRRSW*WADFNCCFVSF Trigger: GAAAGAGACAAAGCAGCAATTAAAGTCAGCCCAGCACCAACTCCGACGCCAAGCGTTACACTGGAAACTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000340807.3 ENST00000416594.2 ENST00000678933.1 |
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| CDS CCA 72 bp | TTTGTTGCTTTAAAAAGTAGTTTCCAGTGTAACGCTTaGCGTCGGAGTTGGTGCTGGGCTGACTTTAATTGC | + |
|
Preference number: 6 (lower is better) Translates to: FVALKSSFQCNA*RRSWCWADFNC Trigger: GCAATTAAAGTCAGCCCAGCACCAACTCCGACGCCAAGCGTTACACTGGAAACTACTTTTTAAAGCAACAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000340807.3 ENST00000397470.5 ENST00000397473.7 ENST00000416594.2 |
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| CDS CAA 72 bp | GTTAGAGCAATAGATGAGCTGTTTTCTAGTGCACAATaGGGAGTACGTAAAGCCAAGTCTTCCAGGTTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: VRAIDELFSSAQ*GVRKAKSSRFC Trigger: ACAAAACCTGGAAGACTTGGCTTTACGTACTCCCAATTGTGCACTAGAAAACAGCTCATCTATTGCTCTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000397473.7 ENST00000416594.2 |
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| CDS TCA 72 bp | TATACAAAGGATAAAGTTTCTTCAGTTTGTGTACTTTaGTGCTTGAAGTCTGCATCATCTTTTTCAGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: YTKDKVSSVCVL*CLKSASSFSGS Trigger: GCTTCCTGAAAAAGATGATGCAGACTTCAAGCATCAAAGTACACAAACTGAAGAAACTTTATCCTTTGTATA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000678933.1 |
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