RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPR176 (Homo sapiens)

Ensembl gene IDs: ENSG00000166073

Ensembl transcript IDs: ENST00000299092.3, ENST00000543580.7, ENST00000558041.5, ENST00000560729.1, ENST00000561100.2

Found 556 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAGGCAGCAGAGCCGCAGGAGGCTGTGGCAGCCCCGTTTCTGCTGTaGGCAAACAGTGCTATGAGGAGACCAACACAAAGAGGAAGGTGC +
Preference number: 1 (lower is better)
Translates to: KAAEPQEAVAAPFLL*ANSAMRRPTQRGRC
Trigger: GCACCTTCCTCTTTGTGTTGGTCTCCTCATAGCACTGTTTGCTCACAGCAGAAACGGGGCTGCCACAGCCTCCTGCGGCTCTGCTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR GCA 90 bp GCCGCAGGAGGCTGTGGCAGCCCCGTTTCTGCTGTGAGCAAACAGTaGTATGAGGAGACCAACACAAAGAGGAAGGTGCTTCCTCTCCAG +
Preference number: 1 (lower is better)
Translates to: AAGGCGSPVSAVSKQ*YEETNTKRKVLPLQ
Trigger: CTGGAGAGGAAGCACCTTCCTCTTTGTGTTGGTCTCCTCATAGCACTGTTTGCTCACAGCAGAAACGGGGCTGCCACAGCCTCCTGCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR TCA 90 bp AATCCACCCCAGAGGGGTCCCAAATTGCTTGTGAGGCTGATGAGTTaGGGACACTGCCCTCCCTCTTCTACCCAGTCTGGCTCTACAACG +
Preference number: 1 (lower is better)
Translates to: NPPQRGPKLLVRLMS*GHCPPSSTQSGSTT
Trigger: CGTTGTAGAGCCAGACTGGGTAGAAGAGGGAGGGCAGTGTCCTCAACTCATCAGCCTCACAAGCAATTTGGGACCCCTCTGGGGTGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR TCA 90 bp AGGAGGCTGTGGCAGCCCCGTTTCTGCTGTGAGCAAACAGTGCTATaGGGAGACCAACACAAAGAGGAAGGTGCTTCCTCTCCAGGGGTA +
Preference number: 1 (lower is better)
Translates to: RRLWQPRFCCEQTVL*GDQHKEEGASSPGV
Trigger: TACCCCTGGAGAGGAAGCACCTTCCTCTTTGTGTTGGTCTCCTCATAGCACTGTTTGCTCACAGCAGAAACGGGGCTGCCACAGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR CCA 90 bp GAGGCTGATGAGTTGAGGACACTGCCCTCCCTCTTCTACCCAGTCTaGCTCTACAACGACAGGGAAGGAGGAAGTGAAGAGCTCATCTGG +
Preference number: 1 (lower is better)
Translates to: EADELRTLPSLFYPV*LYNDREGGSEELIW
Trigger: CCAGATGAGCTCTTCACTTCCTCCTTCCCTGTCGTTGTAGAGCCAGACTGGGTAGAAGAGGGAGGGCAGTGTCCTCAACTCATCAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR CCA 90 bp AAGAGACGGGGCCAGTGTGGCCAAAAGAGGGCACGAGTTGAGATGTaGAAGTTTGCTGGTGAGGACACCCACTTCCCTTCAAGCTTGCTC +
Preference number: 1 (lower is better)
Translates to: KRRGQCGQKRARVEM*KFAGEDTHFPSSLL
Trigger: GAGCAAGCTTGAAGGGAAGTGGGTGTCCTCACCAGCAAACTTCCACATCTCAACTCGTGCCCTCTTTTGGCCACACTGGCCCCGTCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR TCA 90 bp TCTGAAAGTCTTCTCTCTGTGTGTTCTCTGCAGAGCCCAGGGAAGTaGGGCATCCTCAGAAAGTGCACATGGGGTACCCACCTCAAGACC +
Preference number: 1 (lower is better)
Translates to: SESLLSVCSLQSPGK*GILRKCTWGTHLKT
Trigger: GGTCTTGAGGTGGGTACCCCATGTGCACTTTCTGAGGATGCCTCACTTCCCTGGGCTCTGCAGAGAACACACAGAGAGAAGACTTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR CCA 90 bp AGAGCGAAGACTTTTCAGTGTTTTCCAGCCAACACTGACCCTGACTaGAGGGTGCAGGTGTATCTCTCTGAGGCGTTGGTGATGCCAAGG +
Preference number: 1 (lower is better)
Translates to: RAKTFQCFPANTDPD*RVQVYLSEALVMPR
Trigger: CCTTGGCATCACCAACGCCTCAGAGAGATACACCTGCACCCTCCAGTCAGGGTCAGTGTTGGCTGGAAAACACTGAAAAGTCTTCGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR TCA 90 bp CATGATCTTGGAATTCCCTTAGAGTGCTCCTGCTCCCTGCTCCTGTaGGCTCTGAAAGTCTTCTCTCTGTGTGTTCTCTGCAGAGCCCAG +
Preference number: 1 (lower is better)
Translates to: HDLGIPLECSCSLLL*ALKVFSLCVLCRAQ
Trigger: CTGGGCTCTGCAGAGAACACACAGAGAGAAGACTTTCAGAGCTCACAGGAGCAGGGAGCAGGAGCACTCTAAGGGAATTCCAAGATCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR TCA 90 bp CCTCTTCTACCCAGTCTGGCTCTACAACGACAGGGAAGGAGGAAGTaGAGAGCTCATCTGGGTCAGATGTTGCCTTGGCACTCTACAATG +
Preference number: 1 (lower is better)
Translates to: PLLPSLALQRQGRRK*RAHLGQMLPWHSTM
Trigger: CATTGTAGAGTGCCAAGGCAACATCTGACCCAGATGAGCTCTTCACTTCCTCCTTCCCTGTCGTTGTAGAGCCAGACTGGGTAGAAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR TCA 90 bp AGTTCATCAAACAGGCATTTTCTCTGGAGCCACCATGCTCCATCATaGTCTTGGAATTCCCTTAGAGTGCTCCTGCTCCCTGCTCCTGTG +
Preference number: 1 (lower is better)
Translates to: SSSNRHFLWSHHAPS*SWNSLRVLLLPAPV
Trigger: CACAGGAGCAGGGAGCAGGAGCACTCTAAGGGAATTCCAAGATCATGATGGAGCATGGTGGCTCCAGAGAAAATGCCTGTTTGATGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR TCA 90 bp GAACCGCAGCTGTACAAACAGACTGAAAAGGAGACTGGCCACACCTaGGTTCCGGAGTCTTCCTCGGAAGGAAACCATCTTTGTCAGATT +
Preference number: 1 (lower is better)
Translates to: EPQLYKQTEKETGHT*VPESSSEGNHLCQI
Trigger: AATCTGACAAAGATGGTTTCCTTCCGAGGAAGACTCCGGAACTCAGGTGTGGCCAGTCTCCTTTTCAGTCTGTTTGTACAGCTGCGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR GCA 90 bp AGATGTGGAAGTTTGCTGGTGAGGACACCCACTTCCCTTCAAGCTTaGTCAAGGCACCAGACTAGCTCCTGTAAGTACCAAGAGCAAGAA +
Preference number: 1 (lower is better)
Translates to: RCGSLLVRTPTSLQA*SRHQTSSCKYQEQE
Trigger: TTCTTGCTCTTGGTACTTACAGGAGCTAGTCTGGTGCCTTGAGCAAGCTTGAAGGGAAGTGGGTGTCCTCACCAGCAAACTTCCACATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR CCA 90 bp GAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACATaGCCACAGCATTCCCACACTCTGGTGGGAATATGGAAGCTCCCC +
Preference number: 1 (lower is better)
Translates to: EESTHTELQGDHTIT*PQHSHTLVGIWKLP
Trigger: GGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
3UTR TCA 90 bp ATCTCCCTTACTCCCGGGCACATCTATCGCCATGTGTACCATAGGTaGGGAATCGTCATTCCTTACCTACATCCCAATGAAAGGGACGAA +
Preference number: 1 (lower is better)
Translates to: ISLTPGHIYRHVYHR*GIVIPYLHPNERDE
Trigger: TTCGTCCCTTTCATTGGGATGTAGGTAAGGAATGACGATTCCTCACCTATGGTACACATGGCGATAGATGTGCCCGGGAGTAAGGGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR TCA 90 bp CTGACCCTGACTGGAGGGTGCAGGTGTATCTCTCTGAGGCGTTGGTaGTGCCAAGGGAAAATCAGAATTATCAAGGACAAAATATCTCCC +
Preference number: 1 (lower is better)
Translates to: LTLTGGCRCISLRRW*CQGKIRIIKDKISP
Trigger: GGGAGATATTTTGTCCTTGATAATTCTGATTTTCCCTTGGCATCACCAACGCCTCAGAGAGATACACCTGCACCCTCCAGTCAGGGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR GCA 90 bp TCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTaGAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTC +
Preference number: 1 (lower is better)
Translates to: SKASGPYWRNQLTLS*KEIIQSHGHSIPTL
Trigger: GAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
3UTR CCA 90 bp AAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTaGGAATATGGAAGCTCCCCGTTGCTTCCAAGAATTTACAATCCT +
Preference number: 1 (lower is better)
Translates to: KEIIQSHGHSIPTLW*EYGSSPLLPRIYNP
Trigger: AGGATTGTAAATTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
3UTR CCA 90 bp TGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTaGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAATTTACAAT +
Preference number: 1 (lower is better)
Translates to: CKEIIQSHGHSIPTL*WEYGSSPLLPRIYN
Trigger: ATTGTAAATTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
3UTR TCA 90 bp ATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTaGGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCA +
Preference number: 1 (lower is better)
Translates to: IIQKHLAHIGGINSH*VARRSYNHMATAFP
Trigger: TGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
3UTR CCA 90 bp GACCCATTCAAAACTGCCCAGCTCTTGTCCCCACAGAGAATAATGTaGACTTCACTAAGGACATGGATCACTGAGATGGATACATATACT +
Preference number: 1 (lower is better)
Translates to: DPFKTAQLLSPQRIM*TSLRTWITEMDTYT
Trigger: AGTATATGTATCCATCTCAGTGATCCATGTCCTTAGTGAAGTCCACATTATTCTCTGTGGGGACAAGAGCTGGGCAGTTTTGAATGGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR CCA 90 bp CAGCTCTTGTCCCCACAGAGAATAATGTGGACTTCACTAAGGACATaGATCACTGAGATGGATACATATACTCCCTCAATAAAGAGGACA +
Preference number: 1 (lower is better)
Translates to: QLLSPQRIMWTSLRT*ITEMDTYTPSIKRT
Trigger: TGTCCTCTTTATTGAGGGAGTATATGTATCCATCTCAGTGATCCATGTCCTTAGTGAAGTCCACATTATTCTCTGTGGGGACAAGAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR TCA 90 bp GTCCCCACAGAGAATAATGTGGACTTCACTAAGGACATGGATCACTaGGATGGATACATATACTCCCTCAATAAAGAGGACACTGGATTT +
Preference number: 1 (lower is better)
Translates to: VPTENNVDFTKDMDH*DGYIYSLNKEDTGF
Trigger: AAATCCAGTGTCCTCTTTATTGAGGGAGTATATGTATCCATCTCAGTGATCCATGTCCTTAGTGAAGTCCACATTATTCTCTGTGGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR CCA 90 bp ATTTTATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTaGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCA +
Preference number: 1 (lower is better)
Translates to: ILCRFPYHSKASGPY*RNQLTLSCKEIIQS
Trigger: TGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
3UTR CAA 90 bp GGGGCCAGTGTGGCCAAAAGAGGGCACGAGTTGAGATGTGGAAGTTaGCTGGTGAGGACACCCACTTCCCTTCAAGCTTGCTCAAGGCAC +
Preference number: 2 (lower is better)
Translates to: GASVAKRGHELRCGS*LVRTPTSLQACSRH
Trigger: GTGCCTTGAGCAAGCTTGAAGGGAAGTGGGTGTCCTCACCAGCAAACTTCCACATCTCAACTCGTGCCCTCTTTTGGCCACACTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR-3UTR CCA 90 bp ACTATCAGGGCAAGGAGCTATAGATGCCATGCACGCAGGGCCCAGAAGGCAGCACTCAGAAAGTGCACATaGGGTACCCACCTCAAGACC +
Preference number: 2 (lower is better)
Translates to: TIRARSYRCHARRAQKAALRKCT*GTHLKT
Trigger: GGTCTTGAGGTGGGTACCCCATGTGCACTTTCTGAG...TGCTGCCTTCTGGGCCCTGCGTGCATGGCATCTATAGCTCCTTGCCCTGATAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR-3UTR CCA 90 bp AGAGCCGCAGGAGGCTGTGGCAGCCCCGTTTCTGCTGTGAGCAAACAGTGCTATCTCTTCTACCCAGTCTaGCTCTACAACGACAGGGAA +
Preference number: 2 (lower is better)
Translates to: RAAGGCGSPVSAVSKQCYLFYPV*LYNDRE
Trigger: TTCCCTGTCGTTGTAGAGCCAGACTGGGTAGAAGAG...ATAGCACTGTTTGCTCACAGCAGAAACGGGGCTGCCACAGCCTCCTGCGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR CAA 90 bp AAATCCACCCCAGAGGGGTCCCAAATTGCTTGTGAGGCTGATGAGTaGAGGACACTGCCCTCCCTCTTCTACCCAGTCTGGCTCTACAAC +
Preference number: 2 (lower is better)
Translates to: KSTPEGSQIACEADE*RTLPSLFYPVWLYN
Trigger: GTTGTAGAGCCAGACTGGGTAGAAGAGGGAGGGCAGTGTCCTCAACTCATCAGCCTCACAAGCAATTTGGGACCCCTCTGGGGTGGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR-3UTR GCA 90 bp CCCTGTTCTGTTCCTCCTCTGTGTCCAAAATTAAGAGAGAACCGCAGCTGTACAACCCTGACTGGAGGGTaGAGGTGTATCTCTCTGAGG +
Preference number: 2 (lower is better)
Translates to: PCSVPPLCPKLRENRSCTTLTGG*RCISLR
Trigger: CCTCAGAGAGATACACCTGCACCCTCCAGTCAGGGT...TGTACAGCTGCGGTTCTCTCTTAATTTTGGACACAGAGGAGGAACAGAACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR CAA 90 bp GACCAACACAAAGAGGAAGGTGCTTCCTCTCCAGGGGTAGGGTCTTaGGGTTCACATTCAGAAACACAAGACACCACACCCAAGAGAAGA +
Preference number: 2 (lower is better)
Translates to: DQHKEEGASSPGVGS*GSHSETQDTTPKRR
Trigger: TCTTCTCTTGGGTGTGGTGTCTTGTGTTTCTGAATGTGAACCCAAAGACCCTACCCCTGGAGAGGAAGCACCTTCCTCTTTGTGTTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR-3UTR TCA 90 bp TCCCTGTTCTGTTCCTCCTCTGTGTCCAAAATTAAGAGAGAACCGCAGCTGTACTGCTCCTGTGAGCTCTaGAAGTCTTCTCTCTGTGTG +
Preference number: 2 (lower is better)
Translates to: SLFCSSSVSKIKREPQLYCSCEL*KSSLCV
Trigger: CACACAGAGAGAAGACTTTCAGAGCTCACAGGAGCA...GTACAGCTGCGGTTCTCTCTTAATTTTGGACACAGAGGAGGAACAGAACAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR-3UTR GCA 90 bp CATCAAACAGGCATTTTCTCTGGAGCCACCATGCTCCATCATGATCTTGGAATTGGCATCCTCAGAAAGTaGACATGGGGTACCCACCTC +
Preference number: 2 (lower is better)
Translates to: HQTGIFSGATMLHHDLGIGILRK*TWGTHL
Trigger: GAGGTGGGTACCCCATGTGCACTTTCTGAGGATGCC...AATTCCAAGATCATGATGGAGCATGGTGGCTCCAGAGAAAATGCCTGTTTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR-3UTR GCA 90 bp GTGAAGAGCTCATCTGGGTCAGATGTTGCCTTGGCACTCTACAATGATTATTTCGGAATTCCCTTAGAGTaGTCCTGCTCCCTGCTCCTG +
Preference number: 2 (lower is better)
Translates to: VKSSSGSDVALALYNDYFGIPLE*SCSLLL
Trigger: CAGGAGCAGGGAGCAGGAGCACTCTAAGGGAATTCC...GAAATAATCATTGTAGAGTGCCAAGGCAACATCTGACCCAGATGAGCTCTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR CAA 90 bp GAGTTCCGGAGTCTTCCTCGGAAGGAAACCATCTTTGTCAGATTCTaGCCAACCTTTTGGGCAGAGTCACCTTTCCAAATCAGGCCTTTT +
Preference number: 2 (lower is better)
Translates to: EFRSLPRKETIFVRF*PTFWAESPFQIRPF
Trigger: AAAAGGCCTGATTTGGAAAGGTGACTCTGCCCAAAAGGTTGGCAAGAATCTGACAAAGATGGTTTCCTTCCGAGGAAGACTCCGGAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR-3UTR CCA 90 bp CATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGACTCTGGTGGGAATATaGAAGCTCCCCGTTGCTTCC +
Preference number: 2 (lower is better)
Translates to: HSKASGPYWRNQLTLSCKTLVGI*KLPVAS
Trigger: GGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGT...CTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
3UTR CAA 90 bp AACACTGACCCTGACTGGAGGGTGCAGGTGTATCTCTCTGAGGCGTaGGTGATGCCAAGGGAAAATCAGAATTATCAAGGACAAAATATC +
Preference number: 2 (lower is better)
Translates to: NTDPDWRVQVYLSEA*VMPRENQNYQGQNI
Trigger: GATATTTTGTCCTTGATAATTCTGATTTTCCCTTGGCATCACCAACGCCTCAGAGAGATACACCTGCACCCTCCAGTCAGGGTCAGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR-3UTR TCA 90 bp TCGGAAGGAAACCATCTTTGTCAGATTCTTGCCAACCTTTTGGGCAGAGTCACCCACCATGCTCCATCATaGTCTTGGAATTCCCTTAGA +
Preference number: 2 (lower is better)
Translates to: SEGNHLCQILANLLGRVTHHAPS*SWNSLR
Trigger: TCTAAGGGAATTCCAAGATCATGATGGAGCATGGTG...GGTGACTCTGCCCAAAAGGTTGGCAAGAATCTGACAAAGATGGTTTCCTTCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR-3UTR CCA 90 bp GGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCAAGCATTCCCACACTCTaGTGGGAATATGGAAGCTCC +
Preference number: 2 (lower is better)
Translates to: GPYWRNQLTLSCKEIIQSSIPTL*WEYGSS
Trigger: GGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCT...TGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
3UTR CAA 90 bp TTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTaGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACT +
Preference number: 2 (lower is better)
Translates to: FKSIWPILEESTHTE*QGDHTITWPQHSHT
Trigger: AGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
3UTR-3UTR GCA 90 bp CCCTGTTCTGTTCCTCCTCTGTGTCCAAAATTAAGAGAGAACCGCAGCTGTACAATGGAAGCTCCCCGTTaGTTCCAAGAATTTACAATC +
Preference number: 2 (lower is better)
Translates to: PCSVPPLCPKLRENRSCTMEAPR*FQEFTI
Trigger: GATTGTAAATTCTTGGAAGCAACGGGGAGCTTCCAT...TGTACAGCTGCGGTTCTCTCTTAATTTTGGACACAGAGGAGGAACAGAACAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR-3UTR GCA 90 bp ACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGATGGAAGCTCCCCGTTaGTTCCAAGAATTTACAATC +
Preference number: 2 (lower is better)
Translates to: TELQGDHTITWPQHSHTLMEAPR*FQEFTI
Trigger: GATTGTAAATTCTTGGAAGCAACGGGGAGCTTCCAT...CAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
3UTR-3UTR CCA 90 bp ATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTACTCTGGTGGGAATATaGAAGCTCCCCGTTGCTTCC +
Preference number: 2 (lower is better)
Translates to: ISLSFKSIWPILEESTHTTLVGI*KLPVAS
Trigger: GGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGT...AGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
3UTR-3UTR GCA 90 bp GCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATAATGGAAGCTCCCCGTTaGTTCCAAGAATTTACAATC +
Preference number: 2 (lower is better)
Translates to: ASGPYWRNQLTLSCKEIIMEAPR*FQEFTI
Trigger: GATTGTAAATTCTTGGAAGCAACGGGGAGCTTCCAT...TATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
3UTR-3UTR CCA 90 bp TATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACACTCTGGTGGGAATATaGAAGCTCCCCGTTGCTTCC +
Preference number: 2 (lower is better)
Translates to: YVDFPIIQKHLAHIGGINTLVGI*KLPVAS
Trigger: GGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGT...GTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
3UTR-3UTR CCA 90 bp GTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCAAGCATTCCCACACTCTaGTGGGAATATGGAAGCTCC +
Preference number: 2 (lower is better)
Translates to: VDFPIIQKHLAHIGGINSSIPTL*WEYGSS
Trigger: GGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCT...TGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
3UTR-3UTR CCA 90 bp CCCTGTTCTGTTCCTCCTCTGTGTCCAAAATTAAGAGAGAACCGCAGCTGTACAACTTCACTAAGGACATaGATCACTGAGATGGATACA +
Preference number: 2 (lower is better)
Translates to: PCSVPPLCPKLRENRSCTTSLRT*ITEMDT
Trigger: TGTATCCATCTCAGTGATCCATGTCCTTAGTGAAGT...TGTACAGCTGCGGTTCTCTCTTAATTTTGGACACAGAGGAGGAACAGAACAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR-3UTR GCA 90 bp GGTATCAGGAGAAACAGTGAGTCATATGACTGGGGCTTCCAGAGAAACAGTGTACAACTCACACTGAGTTaGAAGGAGATCATACAATCA +
Preference number: 2 (lower is better)
Translates to: GIRRNSESYDWGFQRNSVQLTLS*KEIIQS
Trigger: TGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTG...TACACTGTTTCTCTGGAAGCCCCAGTCATATGACTCACTGTTTCTCCTGATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR-3UTR TCA 90 bp GAGGACACTGGATTTTATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATGGAATCAACTCACACTaGGTTGCAAGGAGATCATAC +
Preference number: 2 (lower is better)
Translates to: EDTGFYVDFPIIQKHLAHGINSH*VARRSY
Trigger: GTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCC...ATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATAAAATCCAGTGTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
3UTR-3UTR TCA 90 bp ATTATCAGAACAACACCAAAGTGGCTACACTTGACAGATTCTCCTAAAGTGGACCTTGGCACTCTACAATaGTTATTTCTCCCTGTTCTG +
Preference number: 2 (lower is better)
Translates to: IIRTTPKWLHLTDSPKVDLGTLQ*LFLPVL
Trigger: CAGAACAGGGAGAAATAATCATTGTAGAGTGCCAAG...GTCCACTTTAGGAGAATCTGTCAAGTGTAGCCACTTTGGTGTTGTTCTGATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR GCA 72 bp GCCACAGCATTGACTATCAGGGCAAGGAGCTATAGATaGCATGCACGCAGGGCCCAGAAGGCAGCAGAGCCG +
Preference number: 3 (lower is better)
Translates to: ATALTIRARSYR*HARRAQKAAEP
Trigger: CGGCTCTGCTGCCTTCTGGGCCCTGCGTGCATGGCATCTATAGCTCCTTGCCCTGATAGTCAATGCTGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR TCA 72 bp CAGAGGGGTCCCAAATTGCTTGTGAGGCTGATGAGTTaGGGACACTGCCCTCCCTCTTCTACCCAGTCTGGC +
Preference number: 3 (lower is better)
Translates to: QRGPKLLVRLMS*GHCPPSSTQSG
Trigger: GCCAGACTGGGTAGAAGAGGGAGGGCAGTGTCCTCAACTCATCAGCCTCACAAGCAATTTGGGACCCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR TCA 72 bp GAGCCGCAGGAGGCTGTGGCAGCCCCGTTTCTGCTGTaGGCAAACAGTGCTATGAGGAGACCAACACAAAGA +
Preference number: 3 (lower is better)
Translates to: EPQEAVAAPFLL*ANSAMRRPTQR
Trigger: TCTTTGTGTTGGTCTCCTCATAGCACTGTTTGCTCACAGCAGAAACGGGGCTGCCACAGCCTCCTGCGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR CCA 72 bp GAGTTGAGGACACTGCCCTCCCTCTTCTACCCAGTCTaGCTCTACAACGACAGGGAAGGAGGAAGTGAAGAG +
Preference number: 3 (lower is better)
Translates to: ELRTLPSLFYPV*LYNDREGGSEE
Trigger: CTCTTCACTTCCTCCTTCCCTGTCGTTGTAGAGCCAGACTGGGTAGAAGAGGGAGGGCAGTGTCCTCAACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR GCA 72 bp GGCTGTGGCAGCCCCGTTTCTGCTGTGAGCAAACAGTaGTATGAGGAGACCAACACAAAGAGGAAGGTGCTT +
Preference number: 3 (lower is better)
Translates to: GCGSPVSAVSKQ*YEETNTKRKVL
Trigger: AAGCACCTTCCTCTTTGTGTTGGTCTCCTCATAGCACTGTTTGCTCACAGCAGAAACGGGGCTGCCACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR TCA 72 bp GGAATTCCCTTAGAGTGCTCCTGCTCCCTGCTCCTGTaGGCTCTGAAAGTCTTCTCTCTGTGTGTTCTCTGC +
Preference number: 3 (lower is better)
Translates to: GIPLECSCSLLL*ALKVFSLCVLC
Trigger: GCAGAGAACACACAGAGAGAAGACTTTCAGAGCTCACAGGAGCAGGGAGCAGGAGCACTCTAAGGGAATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR TCA 72 bp TGGCAGCCCCGTTTCTGCTGTGAGCAAACAGTGCTATaGGGAGACCAACACAAAGAGGAAGGTGCTTCCTCT +
Preference number: 3 (lower is better)
Translates to: WQPRFCCEQTVL*GDQHKEEGASS
Trigger: AGAGGAAGCACCTTCCTCTTTGTGTTGGTCTCCTCATAGCACTGTTTGCTCACAGCAGAAACGGGGCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR GCA 72 bp AGTTTGCTGGTGAGGACACCCACTTCCCTTCAAGCTTaGTCAAGGCACCAGACTAGCTCCTGTAAGTACCAA +
Preference number: 3 (lower is better)
Translates to: SLLVRTPTSLQA*SRHQTSSCKYQ
Trigger: TTGGTACTTACAGGAGCTAGTCTGGTGCCTTGAGCAAGCTTGAAGGGAAGTGGGTGTCCTCACCAGCAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR GCA 72 bp AACAGTGCTATGAGGAGACCAACACAAAGAGGAAGGTaGTTCCTCTCCAGGGGTAGGGTCTTTGGGTTCACA +
Preference number: 3 (lower is better)
Translates to: NSAMRRPTQRGR*FLSRGRVFGFT
Trigger: TGTGAACCCAAAGACCCTACCCCTGGAGAGGAAGCACCTTCCTCTTTGTGTTGGTCTCCTCATAGCACTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR TCA 72 bp AACAGGCATTTTCTCTGGAGCCACCATGCTCCATCATaGTCTTGGAATTCCCTTAGAGTGCTCCTGCTCCCT +
Preference number: 3 (lower is better)
Translates to: NRHFLWSHHAPS*SWNSLRVLLLP
Trigger: AGGGAGCAGGAGCACTCTAAGGGAATTCCAAGATCATGATGGAGCATGGTGGCTCCAGAGAAAATGCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR TCA 72 bp CTGTACAAACAGACTGAAAAGGAGACTGGCCACACCTaGGTTCCGGAGTCTTCCTCGGAAGGAAACCATCTT +
Preference number: 3 (lower is better)
Translates to: LYKQTEKETGHT*VPESSSEGNHL
Trigger: AAGATGGTTTCCTTCCGAGGAAGACTCCGGAACTCAGGTGTGGCCAGTCTCCTTTTCAGTCTGTTTGTACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR CCA 72 bp ACATGGCCACAGCATTCCCACACTCTGGTGGGAATATaGAAGCTCCCCGTTGCTTCCAAGAATTTACAATCC +
Preference number: 3 (lower is better)
Translates to: TWPQHSHTLVGI*KLPVASKNLQS
Trigger: GGATTGTAAATTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
3UTR TCA 72 bp ACTCCCGGGCACATCTATCGCCATGTGTACCATAGGTaGGGAATCGTCATTCCTTACCTACATCCCAATGAA +
Preference number: 3 (lower is better)
Translates to: TPGHIYRHVYHR*GIVIPYLHPNE
Trigger: TTCATTGGGATGTAGGTAAGGAATGACGATTCCTCACCTATGGTACACATGGCGATAGATGTGCCCGGGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR TCA 72 bp CAGGGAAGTATTATCTGCGGTTCTAATTCAACCTGGTaGAATCCACCCCAGAGGGGTCCCAAATTGCTTGTG +
Preference number: 3 (lower is better)
Translates to: QGSIICGSNSTW*NPPQRGPKLLV
Trigger: CACAAGCAATTTGGGACCCCTCTGGGGTGGATTTCACCAGGTTGAATTAGAACCGCAGATAATACTTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR CCA 72 bp ACTCACACTGAGTTGCAAGGAGATCATACAATCACATaGCCACAGCATTCCCACACTCTGGTGGGAATATGG +
Preference number: 3 (lower is better)
Translates to: THTELQGDHTIT*PQHSHTLVGIW
Trigger: CCATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
3UTR CCA 72 bp ACACAACACTCTAGAGAAAAGGGCAGAGCTGGCGCTTaGTTTGTCCTCACTAACAGGGAAGTATTATCTGCG +
Preference number: 3 (lower is better)
Translates to: TQHSREKGRAGA*FVLTNREVLSA
Trigger: CGCAGATAATACTTCCCTGTTAGTGAGGACAAACCAAGCGCCAGCTCTGCCCTTTTCTCTAGAGTGTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR-3UTR CAA 90 bp TCCCTGTTCTGTTCCTCCTCTGTGTCCAAAATTAAGAGAGAACCGCAGCTGTACAAAACTGCCCAGCTCTaGTCCCCACAGAGAATAATG +
Preference number: 3 (lower is better)
Translates to: SLFCSSSVSKIKREPQLYKTAQL*SPQRIM
Trigger: CATTATTCTCTGTGGGGACAAGAGCTGGGCAGTTTT...GTACAGCTGCGGTTCTCTCTTAATTTTGGACACAGAGGAGGAACAGAACAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR-3UTR CAA 90 bp ACAGGCATTTTCTCTGGAGCCACCATGCTCCATCATGATCTTGGAATTCCCTTAAGCATCTGGCCCATATaGGAGGAATCAACTCACACT +
Preference number: 3 (lower is better)
Translates to: TGIFSGATMLHHDLGIPLSIWPI*EESTHT
Trigger: AGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCT...TAAGGGAATTCCAAGATCATGATGGAGCATGGTGGCTCCAGAGAAAATGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR TCA 72 bp ACTGGAGGGTGCAGGTGTATCTCTCTGAGGCGTTGGTaGTGCCAAGGGAAAATCAGAATTATCAAGGACAAA +
Preference number: 3 (lower is better)
Translates to: TGGCRCISLRRW*CQGKIRIIKDK
Trigger: TTTGTCCTTGATAATTCTGATTTTCCCTTGGCATCACCAACGCCTCAGAGAGATACACCTGCACCCTCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR TCA 72 bp AAAGCTTTGAAAGACAAGCTTGAAGGGCCACAGCATTaGCTATCAGGGCAAGGAGCTATAGATGCCATGCAC +
Preference number: 3 (lower is better)
Translates to: KALKDKLEGPQH*LSGQGAIDAMH
Trigger: GTGCATGGCATCTATAGCTCCTTGCCCTGATAGTCAATGCTGTGGCCCTTCAAGCTTGTCTTTCAAAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR TCA 72 bp AAGCATCTGGCCCATATTGGAGGAATCAACTCACACTaGGTTGCAAGGAGATCATACAATCACATGGCCACA +
Preference number: 3 (lower is better)
Translates to: KHLAHIGGINSH*VARRSYNHMAT
Trigger: TGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
3UTR GCA 72 bp TCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTaGAAGGAGATCATACAATCACATGGCCACAGCATT +
Preference number: 3 (lower is better)
Translates to: SGPYWRNQLTLS*KEIIQSHGHSI
Trigger: AATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
3UTR CCA 72 bp ACGAAGGGTATCAGGAGAAACAGTGAGTCATATGACTaGGGCTTCCAGAGAAACAGTGTAAGACACCAAATC +
Preference number: 3 (lower is better)
Translates to: TKGIRRNSESYD*GFQRNSVRHQI
Trigger: GATTTGGTGTCTTACACTGTTTCTCTGGAAGCCCCAGTCATATGACTCACTGTTTCTCCTGATACCCTTCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR-3UTR CAA 90 bp AGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCTATGGAAGCTCCCCGTaGCTTCCAAGAATTTACAAT +
Preference number: 3 (lower is better)
Translates to: RNQLTLSCKEIIQSHGHSYGSSP*LPRIYN
Trigger: ATTGTAAATTCTTGGAAGCAACGGGGAGCTTCCATA...GCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
3UTR-3UTR CAA 90 bp GCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATATATGGAAGCTCCCCGTaGCTTCCAAGAATTTACAAT +
Preference number: 3 (lower is better)
Translates to: ASGPYWRNQLTLSCKEIIYGSSP*LPRIYN
Trigger: ATTGTAAATTCTTGGAAGCAACGGGGAGCTTCCATA...TATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
3UTR-3UTR CAA 90 bp CCCTGTTCTGTTCCTCCTCTGTGTCCAAAATTAAGAGAGAACCGCAGCTGTACATTTGACTCATACTGGTaGTTACATAGCACCTTTCAT +
Preference number: 3 (lower is better)
Translates to: PCSVPPLCPKLRENRSCTFDSYW*LHSTFH
Trigger: ATGAAAGGTGCTATGTAACAACCAGTATGAGTCAAA...TGTACAGCTGCGGTTCTCTCTTAATTTTGGACACAGAGGAGGAACAGAACAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR CCA 72 bp TCCCCACAGAGAATAATGTGGACTTCACTAAGGACATaGATCACTGAGATGGATACATATACTCCCTCAATA +
Preference number: 3 (lower is better)
Translates to: SPQRIMWTSLRT*ITEMDTYTPSI
Trigger: TATTGAGGGAGTATATGTATCCATCTCAGTGATCCATGTCCTTAGTGAAGTCCACATTATTCTCTGTGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR TCA 72 bp GAGAATAATGTGGACTTCACTAAGGACATGGATCACTaGGATGGATACATATACTCCCTCAATAAAGAGGAC +
Preference number: 3 (lower is better)
Translates to: ENNVDFTKDMDH*DGYIYSLNKED
Trigger: GTCCTCTTTATTGAGGGAGTATATGTATCCATCTCAGTGATCCATGTCCTTAGTGAAGTCCACATTATTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp TCACATGGCCACAGCATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGGAGAGCAGGGTGGCGTaGAGCTCGGCCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: SHGHSIPTLWWEYGSSPLESRVA*SSASRW
Trigger: CCAGCGGGAGGCCGAGCTGCACGCCACCCTGCTCTC...CAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp AGAGCCGCAGGAGGCTGTGGCAGCCCCGTTTCTGCTGTGAGCAAACAGTGCTATAGGTTCCACAGGGGCTaGCGGTGCCACCTGGGATAC +
Preference number: 4 (lower is better)
Translates to: RAAGGCGSPVSAVSKQCYRFHRG*RCHLGY
Trigger: GTATCCCAGGTGGCACCGGCAGCCCCTGTGGAACCT...ATAGCACTGTTTGCTCACAGCAGAAACGGGGCTGCCACAGCCTCCTGCGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp CATGGCCACAGCATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCATGGAGAGCAGGGTaGCGTGCAGCTCGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: HGHSIPTLWWEYGSSPLLPWRAG*RAARPP
Trigger: GGGAGGCCGAGCTGCACGCCACCCTGCTCTCCATGG...AAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp CTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGGGACGCGCGGGCGCCTaGCGGAGTCCTGGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: LSCKEIIQSHGHSIPTLWGRAGA*RSPGEA
Trigger: GGCTTCTCCAGGACTCCGCCAGGCGCCCGCGCGTCC...CCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp ACTATCAGGGCAAGGAGCTATAGATGCCATGCACGCAGGGCCCAGAAGGCAGCATCCCGTTATGTCCCATaGCGAGGCTGGGACTCCGGC +
Preference number: 4 (lower is better)
Translates to: TIRARSYRCHARRAQKAASRYVP*RGWDSG
Trigger: GCCGGAGTCCCAGCCTCGCCATGGGACATAACGGGA...TGCTGCCTTCTGGGCCCTGCGTGCATGGCATCTATAGCTCCTTGCCCTGATAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp GCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGGAATGAGAGCAGGGTGGCGTaGAGCTCGGCCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: ARRSYNHMATAFPHSGGNESRVA*SSASRW
Trigger: CCAGCGGGAGGCCGAGCTGCACGCCACCCTGCTCTC...ATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp GGCCACAGCATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCATACCCGAGCGTATGCTaGGTTCCAGGCTGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: GHSIPTLWWEYGSSPLLPYPSVC*VPGWPQ
Trigger: CTGAGGCCAGCCTGGAACCCAGCATACGCTCGGGTA...TGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp CATGGCCACAGCATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCACTGTGCTCAGGGGTaGGGCAGAGGGCGCAAACTG +
Preference number: 4 (lower is better)
Translates to: HGHSIPTLWWEYGSSPLLHCAQG*GRGRKL
Trigger: CAGTTTGCGCCCTCTGCCCCACCCCTGAGCACAGTG...AAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp ACAGCATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAAAACTGGCGGTACAGCTaGGCCTCGCCGAACTCCCCG +
Preference number: 4 (lower is better)
Translates to: TAFPHSGGNMEAPRCFQENWRYS*ASPNSP
Trigger: CGGGGAGTTCGGCGAGGCGCAGCTGTACCGCCAGTT...TTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp AGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGCGCCTGGCGGAGTCCTaGAGAAGCCGGAGCAGCCGA +
Preference number: 4 (lower is better)
Translates to: SCKEIIQSHGHSIPTLWWRLAES*RSRSSR
Trigger: TCGGCTGCTCCGGCTTCTCCAGGACTCCGCCAGGCG...CCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp AGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGCCTGCACGGTGGTGGTaGACTGGCGGTACAGCTGCG +
Preference number: 4 (lower is better)
Translates to: SCKEIIQSHGHSIPTLWWPARWW*TGGTAA
Trigger: CGCAGCTGTACCGCCAGTTCACCACCACCGTGCAGG...CCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp TCCCTGTTCTGTTCCTCCTCTGTGTCCAAAATTAAGAGAGAACCGCAGCTGTACACTCCCCGAGCGCGCTaGGGTTCACACCCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SLFCSSSVSKIKREPQLYTPRAR*GSHPQP
Trigger: AGGCTGCGGGTGTGAACCGCAGCGCGCTCGGGGAGT...GTACAGCTGCGGTTCTCTCTTAATTTTGGACACAGAGGAGGAACAGAACAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp CACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAATTTACAATCCTTGAGAGCAGGGTGGCGTaGAGCTCGGCCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: HSGGNMEAPRCFQEFTILESRVA*SSASRW
Trigger: CCAGCGGGAGGCCGAGCTGCACGCCACCCTGCTCTC...AAGGATTGTAAATTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp ACAGCATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAAGGCTACCCGAGCGTATaGTGGGTTCCAGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: TAFPHSGGNMEAPRCFQEGYPSV*WVPGWP
Trigger: AGGCCAGCCTGGAACCCAGCATACGCTCGGGTAGCC...TTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp TCGGAAGGAAACCATCTTTGTCAGATTCTTGCCAACCTTTTGGGCAGAGTCACCCGCCTGGCGGAGTCCTaGAGAAGCCGGAGCAGCCGA +
Preference number: 4 (lower is better)
Translates to: SEGNHLCQILANLLGRVTRLAES*RSRSSR
Trigger: TCGGCTGCTCCGGCTTCTCCAGGACTCCGCCAGGCG...GGTGACTCTGCCCAAAAGGTTGGCAAGAATCTGACAAAGATGGTTTCCTTCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp TCACATGGCCACAGCATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGGGTAGACGACCAGGGTaGCATAGGGCACGCTACACA +
Preference number: 4 (lower is better)
Translates to: SHGHSIPTLWWEYGSSPLGRRPG*HRARYT
Trigger: TGTGTAGCGTGCCCTATGCCACCCTGGTCGTCTACC...CAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
3UTR CAA 72 bp CCAGAGGGGTCCCAAATTGCTTGTGAGGCTGATGAGTaGAGGACACTGCCCTCCCTCTTCTACCCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: PEGSQIACEADE*RTLPSLFYPVW
Trigger: CCAGACTGGGTAGAAGAGGGAGGGCAGTGTCCTCAACTCATCAGCCTCACAAGCAATTTGGGACCCCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp CATGGCCACAGCATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTGCAGGTGTATCTCTCTaGGGCGTTGGTGATGCCAAG +
Preference number: 4 (lower is better)
Translates to: HGHSIPTLWWEYGSSPLLAGVSL*GVGDAK
Trigger: CTTGGCATCACCAACGCCTCAGAGAGATACACCTGC...AAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp CATGGCCACAGCATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTGAAGGGCCACAGCATTaGCTATCAGGGCAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: HGHSIPTLWWEYGSSPLLEGPQH*LSGQGA
Trigger: AGCTCCTTGCCCTGATAGTCAATGCTGTGGCCCTTC...AAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp AGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGGAATATGGCGCCGGACGCGTTGTaGGGCTCGCTGGCATTTGGA +
Preference number: 4 (lower is better)
Translates to: RRSYNHMATAFPHSGGNMAPDAL*GSLAFG
Trigger: TCCAAATGCCAGCGAGCCGCACAACGCGTCCGGCGC...CATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp CACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAATTTACAATCCTTACTCCCCGAGCGCGCTaGGGTTCACACCCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: HSGGNMEAPRCFQEFTILTPRAR*GSHPQP
Trigger: AGGCTGCGGGTGTGAACCGCAGCGCGCTCGGGGAGT...AAGGATTGTAAATTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp CATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGCGCGGCTGCGCCCCATaGCCACTCCCTCCTGGATCC +
Preference number: 4 (lower is better)
Translates to: HSKASGPYWRNQLTLSCKRGCAP*PLPPGS
Trigger: GGATCCAGGAGGGAGTGGGCATGGGGCGCAGCCGCG...CTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561100.2
CDS-3UTR GCA 90 bp TATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCGGAGGGAGGCGCGGCTaGGCCCCATGCCCACTCCCT +
Preference number: 4 (lower is better)
Translates to: YHSKASGPYWRNQLTLSCGGRRG*APCPLP
Trigger: AGGGAGTGGGCATGGGGCGCAGCCGCGCCTCCCTCC...GCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561100.2
CDS-3UTR CCA 90 bp CTCAGGCATCTCCCCCGTAAGCTTCTCTCTCATTTGTTGAGAAAACACAATTTAGTCCCATGGCGAGGCTaGGACTCCGGCTCCGCGCGC +
Preference number: 4 (lower is better)
Translates to: LRHLPRKLLSHLLRKHNLVPWRG*DSGSAR
Trigger: GCGCGCGGAGCCGGAGTCCCAGCCTCGCCATGGGAC...TAAATTGTGTTTTCTCAACAAATGAGAGAGAAGCTTACGGGGGAGATGCCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp GTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGGCCTTCTTCTTCTGGCTaGCACTCAGGGCCCGTCGGA +
Preference number: 4 (lower is better)
Translates to: VARRSYNHMATAFPHSGGPSSSG*HSGPVG
Trigger: TCCGACGGGCCCTGAGTGCCAGCCAGAAGAAGAAGG...CCCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp CACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAATTTACAATCCTTCCATGGAGAGCAGGGTaGCGTGCAGCTCGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: HSGGNMEAPRCFQEFTILPWRAG*RAARPP
Trigger: GGGAGGCCGAGCTGCACGCCACCCTGCTCTCCATGG...AAGGATTGTAAATTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp AAGGGCAGAGCTGGCGCTTGGTTTGTCCTCACTAACAGGGAAGTATTATCTGCGTACCCGAGCGTATGCTaGGTTCCAGGCTGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: KGRAGAWFVLTNREVLSAYPSVC*VPGWPQ
Trigger: CTGAGGCCAGCCTGGAACCCAGCATACGCTCGGGTA...CGCAGATAATACTTCCCTGTTAGTGAGGACAAACCAAGCGCCAGCTCTGCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp CTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGCACTGTGCTCAGGGGTaGGGCAGAGGGCGCAAACTG +
Preference number: 4 (lower is better)
Translates to: LSCKEIIQSHGHSIPTLWHCAQG*GRGRKL
Trigger: CAGTTTGCGCCCTCTGCCCCACCCCTGAGCACAGTG...CCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp ACTATCAGGGCAAGGAGCTATAGATGCCATGCACGCAGGGCCCAGAAGGCAGCAACTCTGGTGGGAATATaGAAGCTCCCCGTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: TIRARSYRCHARRAQKAATLVGI*KLPVAS
Trigger: GGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGT...TGCTGCCTTCTGGGCCCTGCGTGCATGGCATCTATAGCTCCTTGCCCTGATAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp CTCTTGTCCCCACAGAGAATAATGTGGACTTCACTAAGGACATGGATCACTGAGGCGCCGGACGCGTTGTaGGGCTCGCTGGCATTTGGA +
Preference number: 4 (lower is better)
Translates to: LLSPQRIMWTSLRTWITEAPDAL*GSLAFG
Trigger: TCCAAATGCCAGCGAGCCGCACAACGCGTCCGGCGC...CTCAGTGATCCATGTCCTTAGTGAAGTCCACATTATTCTCTGTGGGGACAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp GCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGGAATGGTGGCCCAAGGAGTTaGTCCAGACTTCCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: ARRSYNHMATAFPHSGGNGGPRS*SRLPCR
Trigger: CCTGCACGGAAGTCTGGAGCAACTCCTTGGGCCACC...ATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp ACTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACGGCTACCCGAGCGTATaGTGGGTTCCAGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: THTELQGDHTITWPQHSHGYPSV*WVPGWP
Trigger: AGGCCAGCCTGGAACCCAGCATACGCTCGGGTAGCC...GTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp TCACATGGCCACAGCATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGGAAGCAGCCGCTTCTTaGTGTTTCGGGTCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: SHGHSIPTLWWEYGSSPLEAAAS*CFGSLR
Trigger: TCTCAGAGACCCGAAACAGCAAGAAGCGGCTGCTTC...CAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp TCTGGAGCCACCATGCTCCATCATGATCTTGGAATTCCCTTAGAGTGCTCCTGCTCTTCCGCTCCACCCTaGCTACCTTGGGCACCTTTG +
Preference number: 4 (lower is better)
Translates to: SGATMLHHDLGIPLECSCSSAPP*LPWAPL
Trigger: CAAAGGTGCCCAAGGTAGGCAGGGTGGAGCGGAAGA...GCAGGAGCACTCTAAGGGAATTCCAAGATCATGATGGAGCATGGTGGCTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp CTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACAACGGTGGTGGTGAACTaGCGGTACAGCTGCGCCTCG +
Preference number: 4 (lower is better)
Translates to: LTLSCKEIIQSHGHSIPTTVVVN*RYSCAS
Trigger: CGAGGCGCAGCTGTACCGCCAGTTCACCACCACCGT...TGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp TTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAATTTACAACGGTGGTGGTGAACTaGCGGTACAGCTGCGCCTCG +
Preference number: 4 (lower is better)
Translates to: FPHSGGNMEAPRCFQEFTTVVVN*RYSCAS
Trigger: CGAGGCGCAGCTGTACCGCCAGTTCACCACCACCGT...TGTAAATTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp CTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGCCTTCTTCTTCTGGCTaGCACTCAGGGCCCGTCGGA +
Preference number: 4 (lower is better)
Translates to: LSCKEIIQSHGHSIPTLWPSSSG*HSGPVG
Trigger: TCCGACGGGCCCTGAGTGCCAGCCAGAAGAAGAAGG...CCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp CAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGGAATATGCTGGGTTCCAGGCTaGCCTCAGCCATGCCACTCC +
Preference number: 4 (lower is better)
Translates to: QGDHTITWPQHSHTLVGICWVPG*PQPCHS
Trigger: GGAGTGGCATGGCTGAGGCCAGCCTGGAACCCAGCA...TATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp TCCCTGTTCTGTTCCTCCTCTGTGTCCAAAATTAAGAGAGAACCGCAGCTGTACAGAGGGCGCAAACTGTaGCCCCTGCTCTCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SLFCSSSVSKIKREPQLYRGRKL*PLLSLQ
Trigger: CTGGAGGGAGAGCAGGGGCCACAGTTTGCGCCCTCT...GTACAGCTGCGGTTCTCTCTTAATTTTGGACACAGAGGAGGAACAGAACAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp ACTATCAGGGCAAGGAGCTATAGATGCCATGCACGCAGGGCCCAGAAGGCAGCAGCACGAGTTGAGATGTaGAAGTTTGCTGGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: TIRARSYRCHARRAQKAAARVEM*KFAGED
Trigger: GTCCTCACCAGCAAACTTCCACATCTCAACTCGTGC...TGCTGCCTTCTGGGCCCTGCGTGCATGGCATCTATAGCTCCTTGCCCTGATAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp TCCCTGTTCTGTTCCTCCTCTGTGTCCAAAATTAAGAGAGAACCGCAGCTGTACAGCCGCAGGAGGCTGTaGCAGCCCCGTTTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SLFCSSSVSKIKREPQLYSRRRL*QPRFCC
Trigger: ACAGCAGAAACGGGGCTGCCACAGCCTCCTGCGGCT...GTACAGCTGCGGTTCTCTCTTAATTTTGGACACAGAGGAGGAACAGAACAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp CATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGCCTGCACGGTGGTGGTaGACTGGCGGTACAGCTGCG +
Preference number: 4 (lower is better)
Translates to: HSKASGPYWRNQLTLSCKPARWW*TGGTAA
Trigger: CGCAGCTGTACCGCCAGTTCACCACCACCGTGCAGG...CTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp AGAGCCGCAGGAGGCTGTGGCAGCCCCGTTTCTGCTGTGAGCAAACAGTGCTATCATGTGTACCATAGGTaGGGAATCGTCATTCCTTAC +
Preference number: 4 (lower is better)
Translates to: RAAGGCGSPVSAVSKQCYHVYHR*GIVIPY
Trigger: GTAAGGAATGACGATTCCTCACCTATGGTACACATG...ATAGCACTGTTTGCTCACAGCAGAAACGGGGCTGCCACAGCCTCCTGCGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp TCGGAAGGAAACCATCTTTGTCAGATTCTTGCCAACCTTTTGGGCAGAGTCACCGAGACTGGCCACACCTaGGTTCCGGAGTCTTCCTCG +
Preference number: 4 (lower is better)
Translates to: SEGNHLCQILANLLGRVTETGHT*VPESSS
Trigger: CGAGGAAGACTCCGGAACTCAGGTGTGGCCAGTCTC...GGTGACTCTGCCCAAAAGGTTGGCAAGAATCTGACAAAGATGGTTTCCTTCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp ACTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACGAGACTGGCCACACCTaGGTTCCGGAGTCTTCCTCG +
Preference number: 4 (lower is better)
Translates to: THTELQGDHTITWPQHSHETGHT*VPESSS
Trigger: CGAGGAAGACTCCGGAACTCAGGTGTGGCCAGTCTC...GTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp GTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGGGACACTGGCCACCACTaGATGGGCCCAGATGTACAT +
Preference number: 4 (lower is better)
Translates to: VARRSYNHMATAFPHSGGDTGHH*MGPDVH
Trigger: ATGTACATCTGGGCCCATGCAGTGGTGGCCAGTGTC...CCCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp TCCCTGTTCTGTTCCTCCTCTGTGTCCAAAATTAAGAGAGAACCGCAGCTGTACGGTGGCCCAAGGAGTTaGTCCAGACTTCCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: SLFCSSSVSKIKREPQLYGGPRS*SRLPCR
Trigger: CCTGCACGGAAGTCTGGAGCAACTCCTTGGGCCACC...GTACAGCTGCGGTTCTCTCTTAATTTTGGACACAGAGGAGGAACAGAACAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp AGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGGAATATGGAAAGGTTCCACAGGGGCTaGCGGTGCCACCTGGGATAC +
Preference number: 4 (lower is better)
Translates to: RSYNHMATAFPHSGGNMERFHRG*RCHLGY
Trigger: GTATCCCAGGTGGCACCGGCAGCCCCTGTGGAACCT...TTCCATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp AAGGGCAGAGCTGGCGCTTGGTTTGTCCTCACTAACAGGGAAGTATTATCTGCGAGAACGTACACCAGGTaGCCCAAGGAGTTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: KGRAGAWFVLTNREVLSARTYTR*PKELLQ
Trigger: CTGGAGCAACTCCTTGGGCCACCTGGTGTACGTTCT...CGCAGATAATACTTCCCTGTTAGTGAGGACAAACCAAGCGCCAGCTCTGCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp GTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGGAACATCTCCAGGAGCTaGCTACCCGAGCGTATGCTG +
Preference number: 4 (lower is better)
Translates to: VARRSYNHMATAFPHSGGNISRS*LPERML
Trigger: CAGCATACGCTCGGGTAGCCAGCTCCTGGAGATGTT...CCCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp AAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCAGAGGGCGCAAACTGTaGCCCCTGCTCTCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: KASGPYWRNQLTLSCKEIRGRKL*PLLSLQ
Trigger: CTGGAGGGAGAGCAGGGGCCACAGTTTGCGCCCTCT...GATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp GAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCACTGTGCTCAGGGGTaGGGCAGAGGGCGCAAACTG +
Preference number: 4 (lower is better)
Translates to: EESTHTELQGDHTITWPQHCAQG*GRGRKL
Trigger: CAGTTTGCGCCCTCTGCCCCACCCCTGAGCACAGTG...CTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp AGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGGAATATGGCTGCCGGTGCCACCTaGGATACAGAGTCCACTGTG +
Preference number: 4 (lower is better)
Translates to: RRSYNHMATAFPHSGGNMAAGAT*DTESTV
Trigger: CACAGTGGACTCTGTATCCCAGGTGGCACCGGCAGC...CATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp CATGGCCACAGCATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCTCTTCTACCCAGTCTaGCTCTACAACGACAGGGAA +
Preference number: 4 (lower is better)
Translates to: HGHSIPTLWWEYGSSPLLLFYPV*LYNDRE
Trigger: TTCCCTGTCGTTGTAGAGCCAGACTGGGTAGAAGAG...AAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp AAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCAGCCGCAGGAGGCTGTaGCAGCCCCGTTTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: KASGPYWRNQLTLSCKEISRRRL*QPRFCC
Trigger: ACAGCAGAAACGGGGCTGCCACAGCCTCCTGCGGCT...GATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp CTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGGTCTCTGAGAGCCACTaGGGAGGCAACTCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: LSCKEIIQSHGHSIPTLWVSESH*GGNSKG
Trigger: GCCTTTTGAGTTGCCTCCTCAGTGGCTCTCAGAGAC...CCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR TCA 90 bp CCCTGTTCTGTTCCTCCTCTGTGTCCAAAATTAAGAGAGAACCGCAGCTGTACAGTGAGGCTGATGAGTTaGGGACACTGCCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: PCSVPPLCPKLRENRSCTVRLMS*GHCPPS
Trigger: AGAGGGAGGGCAGTGTCCTCAACTCATCAGCCTCAC...TGTACAGCTGCGGTTCTCTCTTAATTTTGGACACAGAGGAGGAACAGAACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp GGAGTCTTCCTCGGAAGGAAACCATCTTTGTCAGATTCTTGCCAACCTTTTGGGATACAGAGTCCACTGTaGTCAGGGGTGGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GVFLGRKPSLSDSCQPFGIQSPL*SGVGQR
Trigger: CCTCTGCCCCACCCCTGAGCACAGTGGACTCTGTAT...CCCAAAAGGTTGGCAAGAATCTGACAAAGATGGTTTCCTTCCGAGGAAGACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp AGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGGAATATGATACAGAGTCCACTGTaGTCAGGGGTGGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: RRSYNHMATAFPHSGGNMIQSPL*SGVGQR
Trigger: CCTCTGCCCCACCCCTGAGCACAGTGGACTCTGTAT...CATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp GGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCATCCCGTTATGTCCCATaGCGAGGCTGGGACTCCGGC +
Preference number: 4 (lower is better)
Translates to: GPYWRNQLTLSCKEIIQSSRYVP*RGWDSG
Trigger: GCCGGAGTCCCAGCCTCGCCATGGGACATAACGGGA...TGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp CTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACGTTGTGCGGCTCGCTaGCATTTGGAGAGATCCAGC +
Preference number: 4 (lower is better)
Translates to: LTLSCKEIIQSHGHSIPTRCAAR*HLERSS
Trigger: GCTGGATCTCTCCAAATGCCAGCGAGCCGCACAACG...TGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp CCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACATCCATGGAGAGCAGGGTaGCGTGCAGCTCGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: PYWRNQLTLSCKEIIQSHPWRAG*RAARPP
Trigger: GGGAGGCCGAGCTGCACGCCACCCTGCTCTCCATGG...ATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp ATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAATTTACGGTAGACGACCAGGGTaGCATAGGGCACGCTACACA +
Preference number: 4 (lower is better)
Translates to: IPTLWWEYGSSPLLPRIYGRRPG*HRARYT
Trigger: TGTGTAGCGTGCCCTATGCCACCCTGGTCGTCTACC...GTAAATTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp CATCAAACAGGCATTTTCTCTGGAGCCACCATGCTCCATCATGATCTTGGAATTTGCTGGGTTCCAGGCTaGCCTCAGCCATGCCACTCC +
Preference number: 4 (lower is better)
Translates to: HQTGIFSGATMLHHDLGICWVPG*PQPCHS
Trigger: GGAGTGGCATGGCTGAGGCCAGCCTGGAACCCAGCA...AATTCCAAGATCATGATGGAGCATGGTGGCTCCAGAGAAAATGCCTGTTTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp ACAGGCATTTTCTCTGGAGCCACCATGCTCCATCATGATCTTGGAATTCCCTTATACCCGAGCGTATGCTaGGTTCCAGGCTGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: TGIFSGATMLHHDLGIPLYPSVC*VPGWPQ
Trigger: CTGAGGCCAGCCTGGAACCCAGCATACGCTCGGGTA...TAAGGGAATTCCAAGATCATGATGGAGCATGGTGGCTCCAGAGAAAATGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp GCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGGAATTGCTGCTGCCCAATGTaGAACATCTCCAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: ARRSYNHMATAFPHSGGNCCCPM*NISRSW
Trigger: CCAGCTCCTGGAGATGTTCCACATTGGGCAGCAGCA...ATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp GAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGGCTGCCGGTGCCACCTaGGATACAGAGTCCACTGTG +
Preference number: 4 (lower is better)
Translates to: EESTHTELQGDHTITWPQAAGAT*DTESTV
Trigger: CACAGTGGACTCTGTATCCCAGGTGGCACCGGCAGC...CTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp AAGGGCAGAGCTGGCGCTTGGTTTGTCCTCACTAACAGGGAAGTATTATCTGCGTTGGGCACCTTTGTCTaGATCAGCTCTTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: KGRAGAWFVLTNREVLSALGTFV*ISSSGV
Trigger: CACCCCAGAAGAGCTGATCCAGACAAAGGTGCCCAA...CGCAGATAATACTTCCCTGTTAGTGAGGACAAACCAAGCGCCAGCTCTGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp TCTGGAGCCACCATGCTCCATCATGATCTTGGAATTCCCTTAGAGTGCTCCTGCAACACTGACCCTGACTaGAGGGTGCAGGTGTATCTC +
Preference number: 4 (lower is better)
Translates to: SGATMLHHDLGIPLECSCNTDPD*RVQVYL
Trigger: GAGATACACCTGCACCCTCCAGTCAGGGTCAGTGTT...GCAGGAGCACTCTAAGGGAATTCCAAGATCATGATGGAGCATGGTGGCTCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp GGTATCAGGAGAAACAGTGAGTCATATGACTGGGGCTTCCAGAGAAACAGTGTAGAGACGGGGCCAGTGTaGCCAAAAGAGGGCACGAGT +
Preference number: 4 (lower is better)
Translates to: GIRRNSESYDWGFQRNSVETGPV*PKEGTS
Trigger: ACTCGTGCCCTCTTTTGGCCACACTGGCCCCGTCTC...TACACTGTTTCTCTGGAAGCCCCAGTCATATGACTCACTGTTTCTCCTGATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp AAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCACTCCCTACAGGGTCTaGGCTCCCTCCAAGAGACGG +
Preference number: 4 (lower is better)
Translates to: KASGPYWRNQLTLSCKEITPYRV*APSKRR
Trigger: CCGTCTCTTGGAGGGAGCCCAGACCCTGTAGGGAGT...GATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp GGAGTCTTCCTCGGAAGGAAACCATCTTTGTCAGATTCTTGCCAACCTTTTGGGATCCACCAGCAACAGTaGGGACTGGTGCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: GVFLGRKPSLSDSCQPFGIHQQQ*GLVLRM
Trigger: CATCCTCAGCACCAGTCCTCACTGTTGCTGGTGGAT...CCCAAAAGGTTGGCAAGAATCTGACAAAGATGGTTTCCTTCCGAGGAAGACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp TTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAATTTACATGCCACTCCCTGTACTaGCCACATTACGGCGACTGT +
Preference number: 4 (lower is better)
Translates to: FPHSGGNMEAPRCFQEFTCHSLY*PHYGDC
Trigger: ACAGTCGCCGTAATGTGGTCAGTACAGGGAGTGGCA...TGTAAATTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR TCA 90 bp AGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATGGCCTGGAAGTCAGCTaGGCCAATGTACTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SIWPILEESTHTELQGDHGLEVS*ANVLGL
Trigger: GAGGCCAAGTACATTGGCTCAGCTGACTTCCAGGCC...ATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR TCA 90 bp ACATGGCCACAGCATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTGGAATCAACTCACACTaGGTTGCAAGGAGATCATAC +
Preference number: 4 (lower is better)
Translates to: TWPQHSHTLVGIWKLPVAGINSH*VARRSY
Trigger: GTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCC...AGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR TCA 90 bp AAGGGCAGAGCTGGCGCTTGGTTTGTCCTCACTAACAGGGAAGTATTATCTGCGTGCTCCTGTGAGCTCTaGAAGTCTTCTCTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: KGRAGAWFVLTNREVLSACSCEL*KSSLCV
Trigger: CACACAGAGAGAAGACTTTCAGAGCTCACAGGAGCA...CGCAGATAATACTTCCCTGTTAGTGAGGACAAACCAAGCGCCAGCTCTGCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp ATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAATTTACCAGGGAAGGAGGAAGTaGAGAGCTCATCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: IPTLWWEYGSSPLLPRIYQGRRK*RAHLGQ
Trigger: CTGACCCAGATGAGCTCTTCACTTCCTCCTTCCCTG...GTAAATTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp TCCCTGTTCTGTTCCTCCTCTGTGTCCAAAATTAAGAGAGAACCGCAGCTGTACCAGGGAAGGAGGAAGTaGAGAGCTCATCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: SLFCSSSVSKIKREPQLYQGRRK*RAHLGQ
Trigger: CTGACCCAGATGAGCTCTTCACTTCCTCCTTCCCTG...GTACAGCTGCGGTTCTCTCTTAATTTTGGACACAGAGGAGGAACAGAACAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp CACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAATTTACAATCCGACACTGGCCACCACTaGATGGGCCCAGATGTACAT +
Preference number: 4 (lower is better)
Translates to: HTLVGIWKLPVASKNLQSDTGHH*MGPDVH
Trigger: ATGTACATCTGGGCCCATGCAGTGGTGGCCAGTGTC...GGATTGTAAATTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp CAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGGAATATGCTCCAGACTTCCGTaGAGGTGGACGTGGCATAGA +
Preference number: 4 (lower is better)
Translates to: QGDHTITWPQHSHTLVGICSRLP*RWTWHR
Trigger: TCTATGCCACGTCCACCTGCACGGAAGTCTGGAGCA...TATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp CACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAATTTACAATCCTTATACAGAGTCCACTGTaGTCAGGGGTGGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: HSGGNMEAPRCFQEFTILIQSPL*SGVGQR
Trigger: CCTCTGCCCCACCCCTGAGCACAGTGGACTCTGTAT...AAGGATTGTAAATTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp ATTTTATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATGGACGCGCGGGCGCCTaGCGGAGTCCTGGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: ILCRFPYHSKASGPYWRNGRAGA*RSPGEA
Trigger: GGCTTCTCCAGGACTCCGCCAGGCGCCCGCGCGTCC...ATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp AGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCCGGCTCGCTGGCATTTaGAGAGATCCAGCTCCCGTT +
Preference number: 4 (lower is better)
Translates to: RNQLTLSCKEIIQSHGHSRLAGI*RDPAPV
Trigger: AACGGGAGCTGGATCTCTCCAAATGCCAGCGAGCCG...GCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp GTGAAGAGCTCATCTGGGTCAGATGTTGCCTTGGCACTCTACAATGATTATTTCGCACACAGACCAGGCTaGCACAAATCCCCGAGCAGG +
Preference number: 4 (lower is better)
Translates to: VKSSSGSDVALALYNDYFAHRPG*HKSPSR
Trigger: CCTGCTCGGGGATTTGTGCCAGCCTGGTCTGTGTGC...GAAATAATCATTGTAGAGTGCCAAGGCAACATCTGACCCAGATGAGCTCTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp AGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATCTGGCCACCACTGCATaGGCCCAGATGTACATCACC +
Preference number: 4 (lower is better)
Translates to: SIWPILEESTHTELQGDHLATTA*AQMYIT
Trigger: GGTGATGTACATCTGGGCCCATGCAGTGGTGGCCAG...ATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp CACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAATTTACAATCCCCGTGCAGGTGGACGTaGCATAGATGTCAGCCACAT +
Preference number: 4 (lower is better)
Translates to: HTLVGIWKLPVASKNLQSPCRWT*HRCQPH
Trigger: ATGTGGCTGACATCTATGCCACGTCCACCTGCACGG...GGATTGTAAATTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp GCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGGAATAGACTTCCGTGCAGGTaGACGTGGCATAGATGTCAG +
Preference number: 4 (lower is better)
Translates to: ARRSYNHMATAFPHSGGNRLPCR*TWHRCQ
Trigger: CTGACATCTATGCCACGTCCACCTGCACGGAAGTCT...ATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp ACTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACAGAACGTACACCAGGTaGCCCAAGGAGTTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: THTELQGDHTITWPQHSHRTYTR*PKELLQ
Trigger: CTGGAGCAACTCCTTGGGCCACCTGGTGTACGTTCT...GTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp GAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGGGTAGACGACCAGGGTaGCATAGGGCACGCTACACA +
Preference number: 4 (lower is better)
Translates to: EESTHTELQGDHTITWPQGRRPG*HRARYT
Trigger: TGTGTAGCGTGCCCTATGCCACCCTGGTCGTCTACC...CTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp GGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACGGCGACTGTACCGGTaGTGTAGTTGCACCAGGGTC +
Preference number: 4 (lower is better)
Translates to: GPYWRNQLTLSCKEIIQSRRLYR*CSCTRV
Trigger: GACCCTGGTGCAACTACACCACCGGTACAGTCGCCG...TGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp ACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGAACATCTCCAGGAGCTaGCTACCCGAGCGTATGCTG +
Preference number: 4 (lower is better)
Translates to: TELQGDHTITWPQHSHTLNISRS*LPERML
Trigger: CAGCATACGCTCGGGTAGCCAGCTCCTGGAGATGTT...CAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp CATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGCTGCCGGTGCCACCTaGGATACAGAGTCCACTGTG +
Preference number: 4 (lower is better)
Translates to: HSKASGPYWRNQLTLSCKAAGAT*DTESTV
Trigger: CACAGTGGACTCTGTATCCCAGGTGGCACCGGCAGC...CTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp GGGTCCCAAATTGCTTGTGAGGCTGATGAGTTGAGGACACTGCCCTCCCTCTTCGATCATACAATCACATaGCCACAGCATTCCCACACT +
Preference number: 4 (lower is better)
Translates to: GSQIACEADELRTLPSLFDHTIT*PQHSHT
Trigger: AGTGTGGGAATGCTGTGGCCATGTGATTGTATGATC...GAAGAGGGAGGGCAGTGTCCTCAACTCATCAGCCTCACAAGCAATTTGGGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR CAA 72 bp AAAGAGGAAGGTGCTTCCTCTCCAGGGGTAGGGTCTTaGGGTTCACATTCAGAAACACAAGACACCACACCC +
Preference number: 4 (lower is better)
Translates to: KEEGASSPGVGS*GSHSETQDTTP
Trigger: GGGTGTGGTGTCTTGTGTTTCTGAATGTGAACCCAAAGACCCTACCCCTGGAGAGGAAGCACCTTCCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp ACATGGCCACAGCATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTCTTTGTGCAAAAATTTaGCGACCTTGCAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: TWPQHSHTLVGIWKLPVALCAKI*RPCRRA
Trigger: TGCTCTTCTGCAAGGTCGTCAAATTTTTGCACAAAG...AGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR TCA 90 bp CACAGCATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAGGAATCAACTCACACTaGGTTGCAAGGAGATCATAC +
Preference number: 4 (lower is better)
Translates to: HSIPTLWWEYGSSPLLPRGINSH*VARRSY
Trigger: GTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCC...TCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR TCA 90 bp CATGGCCACAGCATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTAAGGACATGGATCACTaGGATGGATACATATACTCC +
Preference number: 4 (lower is better)
Translates to: HGHSIPTLWWEYGSSPLLKDMDH*DGYIYS
Trigger: GGAGTATATGTATCCATCTCAGTGATCCATGTCCTT...AAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp CCCTGTTCTGTTCCTCCTCTGTGTCCAAAATTAAGAGAGAACCGCAGCTGTACATGCTCCCTGCTCCTGTaGGCTCTGAAAGTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PCSVPPLCPKLRENRSCTCSLLL*ALKVFS
Trigger: AGAGAAGACTTTCAGAGCTCACAGGAGCAGGGAGCA...TGTACAGCTGCGGTTCTCTCTTAATTTTGGACACAGAGGAGGAACAGAACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp AAGGGCAGAGCTGGCGCTTGGTTTGTCCTCACTAACAGGGAAGTATTATCTGCGCAGGCCTTTTCAGTTTaGTGTTTCCAAAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: KGRAGAWFVLTNREVLSAQAFSV*CFQRTQ
Trigger: CTGGGTCCTTTGGAAACATCAAACTGAAAAGGCCTG...CGCAGATAATACTTCCCTGTTAGTGAGGACAAACCAAGCGCCAGCTCTGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp TTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGTGAGGCTGATGAGTTaGGGACACTGCCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: FKSIWPILEESTHTELQGVRLMS*GHCPPS
Trigger: AGAGGGAGGGCAGTGTCCTCAACTCATCAGCCTCAC...TCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp CACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAATTTACAATCCTTGTGGAAGTTTGCTGGTaGGGACACCCACTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: HSGGNMEAPRCFQEFTILVEVCW*GHPLPF
Trigger: GAAGGGAAGTGGGTGTCCTCACCAGCAAACTTCCAC...AAGGATTGTAAATTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp AAGGGCAGAGCTGGCGCTTGGTTTGTCCTCACTAACAGGGAAGTATTATCTGCGGAGCAAACAGTGCTATaGGGAGACCAACACAAAGAG +
Preference number: 4 (lower is better)
Translates to: KGRAGAWFVLTNREVLSAEQTVL*GDQHKE
Trigger: CTCTTTGTGTTGGTCTCCTCATAGCACTGTTTGCTC...CGCAGATAATACTTCCCTGTTAGTGAGGACAAACCAAGCGCCAGCTCTGCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp CTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGCGCAACCCCCAACACTaGGAACAAAGACCAAAGATG +
Preference number: 4 (lower is better)
Translates to: LSCKEIIQSHGHSIPTLWRNPQH*EQRPKM
Trigger: CATCTTTGGTCTTTGTTCTCAGTGTTGGGGGTTGCG...CCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543580.7
CDS-3UTR GCA 90 bp CCCTGTTCTGTTCCTCCTCTGTGTCCAAAATTAAGAGAGAACCGCAGCTGTACAATGAAGATGACGACCTaGACGGTGGTGGTGAACTGG +
Preference number: 4 (lower is better)
Translates to: PCSVPPLCPKLRENRSCTMKMTT*TVVVNW
Trigger: CCAGTTCACCACCACCGTGCAGGTCGTCATCTTCAT...TGTACAGCTGCGGTTCTCTCTTAATTTTGGACACAGAGGAGGAACAGAACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp GGAGTCTTCCTCGGAAGGAAACCATCTTTGTCAGATTCTTGCCAACCTTTTGGGTGGGGTCCGGAGCGCTaGTATGATGACCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: GVFLGRKPSLSDSCQPFGWGPER*YDDLLL
Trigger: AAGAAGAAGGTCATCATAGCAGCGCTCCGGACCCCA...CCCAAAAGGTTGGCAAGAATCTGACAAAGATGGTTTCCTTCCGAGGAAGACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp ACAGCATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAAGGCTTAAAGATCTGCTaGTGCCCAATGTGGAACATC +
Preference number: 4 (lower is better)
Translates to: TAFPHSGGNMEAPRCFQEGLKIC*CPMWNI
Trigger: GATGTTCCACATTGGGCAGCAGCAGATCTTTAAGCC...TTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp GAGGACACTGGATTTTATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATAGGTTCCACAGGGGCTaGCGGTGCCACCTGGGATAC +
Preference number: 4 (lower is better)
Translates to: EDTGFYVDFPIIQKHLAHRFHRG*RCHLGY
Trigger: GTATCCCAGGTGGCACCGGCAGCCCCTGTGGAACCT...ATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATAAAATCCAGTGTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp TCCCTGTTCTGTTCCTCCTCTGTGTCCAAAATTAAGAGAGAACCGCAGCTGTACGAAGCAGCCGCTTCTTaGTGTTTCGGGTCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: SLFCSSSVSKIKREPQLYEAAAS*CFGSLR
Trigger: TCTCAGAGACCCGAAACAGCAAGAAGCGGCTGCTTC...GTACAGCTGCGGTTCTCTCTTAATTTTGGACACAGAGGAGGAACAGAACAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp CAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGGAATAGAAGCAGCCGCTTCTTaGTGTTTCGGGTCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: QGDHTITWPQHSHTLVGIEAAAS*CFGSLR
Trigger: TCTCAGAGACCCGAAACAGCAAGAAGCGGCTGCTTC...TATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp TTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGATCTTCCGCTCCACCCTaGCTACCTTGGGCACCTTTG +
Preference number: 4 (lower is better)
Translates to: FKSIWPILEESTHTELQGSSAPP*LPWAPL
Trigger: CAAAGGTGCCCAAGGTAGGCAGGGTGGAGCGGAAGA...TCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp AAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCACCCTGACTGGAGGGTaGAGGTGTATCTCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: KASGPYWRNQLTLSCKEITLTGG*RCISLR
Trigger: CCTCAGAGAGATACACCTGCACCCTCCAGTCAGGGT...GATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp ATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAATTTACTGGCAGCCCCGTTTCTaGTGTGAGCAAACAGTGCTA +
Preference number: 4 (lower is better)
Translates to: IPTLWWEYGSSPLLPRIYWQPRF*CEQTVL
Trigger: TAGCACTGTTTGCTCACAGCAGAAACGGGGCTGCCA...GTAAATTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp ATGTGTACCATAGGTGAGGAATCGTCATTCCTTACCTACATCCCAATGAAAGGGGCAAGGAGCTATAGATaGCATGCACGCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: MCTIGEESSFLTYIPMKGARSYR*HARRAQ
Trigger: CTGGGCCCTGCGTGCATGGCATCTATAGCTCCTTGC...CCCTTTCATTGGGATGTAGGTAAGGAATGACGATTCCTCACCTATGGTACACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp TATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCGCACACAGACCAGGCTaGCACAAATCCCCGAGCAGG +
Preference number: 4 (lower is better)
Translates to: YHSKASGPYWRNQLTLSCAHRPG*HKSPSR
Trigger: CCTGCTCGGGGATTTGTGCCAGCCTGGTCTGTGTGC...GCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp GGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACTGGCCACCACTGCATaGGCCCAGATGTACATCACC +
Preference number: 4 (lower is better)
Translates to: GPYWRNQLTLSCKEIIQSLATTA*AQMYIT
Trigger: GGTGATGTACATCTGGGCCCATGCAGTGGTGGCCAG...TGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp ACAGGCATTTTCTCTGGAGCCACCATGCTCCATCATGATCTTGGAATTCCCTTACCGTGCAGGTGGACGTaGCATAGATGTCAGCCACAT +
Preference number: 4 (lower is better)
Translates to: TGIFSGATMLHHDLGIPLPCRWT*HRCQPH
Trigger: ATGTGGCTGACATCTATGCCACGTCCACCTGCACGG...TAAGGGAATTCCAAGATCATGATGGAGCATGGTGGCTCCAGAGAAAATGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp CTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACAAGACTTCCGTGCAGGTaGACGTGGCATAGATGTCAG +
Preference number: 4 (lower is better)
Translates to: LTLSCKEIIQSHGHSIPTRLPCR*TWHRCQ
Trigger: CTGACATCTATGCCACGTCCACCTGCACGGAAGTCT...TGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp AAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCAGAGATGGTGTTCTGTaGGGTCCGGAGCGCTGCTAT +
Preference number: 4 (lower is better)
Translates to: KASGPYWRNQLTLSCKEIRDGVL*GPERCY
Trigger: ATAGCAGCGCTCCGGACCCCACAGAACACCATCTCT...GATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp CTCAGGCATCTCCCCCGTAAGCTTCTCTCTCATTTGTTGAGAAAACACAATTTACGGCGACTGTACCGGTaGTGTAGTTGCACCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LRHLPRKLLSHLLRKHNLRRLYR*CSCTRV
Trigger: GACCCTGGTGCAACTACACCACCGGTACAGTCGCCG...TAAATTGTGTTTTCTCAACAAATGAGAGAGAAGCTTACGGGGGAGATGCCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp ATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTTGCTGGGTTCCAGGCTaGCCTCAGCCATGCCACTCC +
Preference number: 4 (lower is better)
Translates to: ISLSFKSIWPILEESTHTCWVPG*PQPCHS
Trigger: GGAGTGGCATGGCTGAGGCCAGCCTGGAACCCAGCA...AGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp AGAGCTCATCTGGGTCAGATGTTGCCTTGGCACTCTACAATGATTATTTCTCCCAACATCTCCAGGAGCTaGCTACCCGAGCGTATGCTG +
Preference number: 4 (lower is better)
Translates to: RAHLGQMLPWHSTMIISPNISRS*LPERML
Trigger: CAGCATACGCTCGGGTAGCCAGCTCCTGGAGATGTT...GGGAGAAATAATCATTGTAGAGTGCCAAGGCAACATCTGACCCAGATGAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp CACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAATTTACAATCCTTTGCTGCTGCCCAATGTaGAACATCTCCAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: HSGGNMEAPRCFQEFTILCCCPM*NISRSW
Trigger: CCAGCTCCTGGAGATGTTCCACATTGGGCAGCAGCA...AAGGATTGTAAATTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp ACAGCATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAAAATATCTCCTTGGCCTaGAAGTCAGCTGAGCCAATG +
Preference number: 4 (lower is better)
Translates to: TAFPHSGGNMEAPRCFQENISLA*KSAEPM
Trigger: CATTGGCTCAGCTGACTTCCAGGCCAAGGAGATATT...TTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp CCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACATAGAGGGCGCAAACTGTaGCCCCTGCTCTCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PYWRNQLTLSCKEIIQSHRGRKL*PLLSLQ
Trigger: CTGGAGGGAGAGCAGGGGCCACAGTTTGCGCCCTCT...ATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp TTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAATTTACATTGGGCACCTTTGTCTaGATCAGCTCTTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: FPHSGGNMEAPRCFQEFTLGTFV*ISSSGV
Trigger: CACCCCAGAAGAGCTGATCCAGACAAAGGTGCCCAA...TGTAAATTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp ACTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGGAATATaGAAGCTCCCCGTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: THTELQGDHTITWPQHSHTLVGI*KLPVAS
Trigger: GGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGT...GTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp ACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGATTCCCACACTCTGGTaGGAATATGGAAGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: TELQGDHTITWPQHSHTLIPTLW*EYGSSP
Trigger: CGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAAT...CAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp AGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGAGCATTCCCACACTCTaGTGGGAATATGGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: SCKEIIQSHGHSIPTLWWSIPTL*WEYGSS
Trigger: GGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCT...CCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp GGAGTCTTCCTCGGAAGGAAACCATCTTTGTCAGATTCTTGCCAACCTTTTGGGCTCAGAAAGTGCACATaGGGTACCCACCTCAAGACC +
Preference number: 4 (lower is better)
Translates to: GVFLGRKPSLSDSCQPFGLRKCT*GTHLKT
Trigger: GGTCTTGAGGTGGGTACCCCATGTGCACTTTCTGAG...CCCAAAAGGTTGGCAAGAATCTGACAAAGATGGTTTCCTTCCGAGGAAGACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp GCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATAGGCAGAGCTGGCGCTTaGTTTGTCCTCACTAACAGG +
Preference number: 4 (lower is better)
Translates to: ASGPYWRNQLTLSCKEIIGRAGA*FVLTNR
Trigger: CCTGTTAGTGAGGACAAACCAAGCGCCAGCTCTGCC...TATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp CTCAGGCATCTCCCCCGTAAGCTTCTCTCTCATTTGTTGAGAAAACACAATTTAGAGACGGGGCCAGTGTaGCCAAAAGAGGGCACGAGT +
Preference number: 4 (lower is better)
Translates to: LRHLPRKLLSHLLRKHNLETGPV*PKEGTS
Trigger: ACTCGTGCCCTCTTTTGGCCACACTGGCCCCGTCTC...TAAATTGTGTTTTCTCAACAAATGAGAGAGAAGCTTACGGGGGAGATGCCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp CCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACAACTCCCTACAGGGTCTaGGCTCCCTCCAAGAGACGG +
Preference number: 4 (lower is better)
Translates to: PILEESTHTELQGDHTITTPYRV*APSKRR
Trigger: CCGTCTCTTGGAGGGAGCCCAGACCCTGTAGGGAGT...TGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR CAA 72 bp CCTGACTGGAGGGTGCAGGTGTATCTCTCTGAGGCGTaGGTGATGCCAAGGGAAAATCAGAATTATCAAGGA +
Preference number: 4 (lower is better)
Translates to: PDWRVQVYLSEA*VMPRENQNYQG
Trigger: TCCTTGATAATTCTGATTTTCCCTTGGCATCACCAACGCCTCAGAGAGATACACCTGCACCCTCCAGTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR CAA 72 bp CTGAGTTCCGGAGTCTTCCTCGGAAGGAAACCATCTTaGTCAGATTCTTGCCAACCTTTTGGGCAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: LSSGVFLGRKPS*SDSCQPFGQSH
Trigger: GTGACTCTGCCCAAAAGGTTGGCAAGAATCTGACAAAGATGGTTTCCTTCCGAGGAAGACTCCGGAACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp CATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGATCCACCAGCAACAGTaGGGACTGGTGCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: HSKASGPYWRNQLTLSCKIHQQQ*GLVLRM
Trigger: CATCCTCAGCACCAGTCCTCACTGTTGCTGGTGGAT...CTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR TCA 90 bp CACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAATTTACAATCCCAGTGGATAGAGGACTaGGTAGTACCTGTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: HTLVGIWKLPVASKNLQSQWIED*VVPVQS
Trigger: GCTTTGGACAGGTACTACTCAGTCCTCTATCCACTG...GGATTGTAAATTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR TCA 90 bp ATGTGTACCATAGGTGAGGAATCGTCATTCCTTACCTACATCCCAATGAAAGGGTGCCACTCCCTGTACTaGCCACATTACGGCGACTGT +
Preference number: 4 (lower is better)
Translates to: MCTIGEESSFLTYIPMKGCHSLY*PHYGDC
Trigger: ACAGTCGCCGTAATGTGGTCAGTACAGGGAGTGGCA...CCCTTTCATTGGGATGTAGGTAAGGAATGACGATTCCTCACCTATGGTACACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp CCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACAGGCCTGGAAGTCAGCTaGGCCAATGTACTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PILEESTHTELQGDHTITGLEVS*ANVLGL
Trigger: GAGGCCAAGTACATTGGCTCAGCTGACTTCCAGGCC...TGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR TCA 90 bp AAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCTGCTCCCTGCTCCTGTaGGCTCTGAAAGTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: KASGPYWRNQLTLSCKEICSLLL*ALKVFS
Trigger: AGAGAAGACTTTCAGAGCTCACAGGAGCAGGGAGCA...GATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp CAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGGAATATCTCTGAGGCGTTGGTaGTGCCAAGGGAAAATCAGA +
Preference number: 4 (lower is better)
Translates to: QGDHTITWPQHSHTLVGISLRRW*CQGKIR
Trigger: TCTGATTTTCCCTTGGCATCACCAACGCCTCAGAGA...TATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp GGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCAGCAGGTGTATCTCTCTaGGGCGTTGGTGATGCCAAG +
Preference number: 4 (lower is better)
Translates to: GPYWRNQLTLSCKEIIQSAGVSL*GVGDAK
Trigger: CTTGGCATCACCAACGCCTCAGAGAGATACACCTGC...TGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp CCCTGTTCTGTTCCTCCTCTGTGTCCAAAATTAAGAGAGAACCGCAGCTGTACAGCTGTACAAACAGACTaGAAAGGAGACTGGCCACAC +
Preference number: 4 (lower is better)
Translates to: PCSVPPLCPKLRENRSCTAVQTD*KGDWPH
Trigger: GTGTGGCCAGTCTCCTTTTCAGTCTGTTTGTACAGC...TGTACAGCTGCGGTTCTCTCTTAATTTTGGACACAGAGGAGGAACAGAACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp TTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAATTTACATCTAATTCAACCTGGTaGAATCCACCCCAGAGGGGT +
Preference number: 4 (lower is better)
Translates to: FPHSGGNMEAPRCFQEFTSNSTW*NPPQRG
Trigger: ACCCCTCTGGGGTGGATTTCACCAGGTTGAATTAGA...TGTAAATTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp AAGGGCAGAGCTGGCGCTTGGTTTGTCCTCACTAACAGGGAAGTATTATCTGCGAAATACACCTGGCAATaGCCTGTTAGTAGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: KGRAGAWFVLTNREVLSAKYTWQ*PVSSQP
Trigger: TGGCTGACTACTAACAGGTCATTGCCAGGTGTATTT...CGCAGATAATACTTCCCTGTTAGTGAGGACAAACCAAGCGCCAGCTCTGCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp GAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGTCAGACAGAAGCAGTTaGACTCCAGAGCCTGGGATG +
Preference number: 4 (lower is better)
Translates to: EESTHTELQGDHTITWPQSDRSS*TPEPGM
Trigger: CATCCCAGGCTCTGGAGTTCAACTGCTTCTGTCTGA...CTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543580.7
CDS-3UTR TCA 90 bp GGAGTCTTCCTCGGAAGGAAACCATCTTTGTCAGATTCTTGCCAACCTTTTGGGTTGACCATAACACCATaGAGTTTCCGAGCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: GVFLGRKPSLSDSCQPFGLTITP*SFRAAS
Trigger: GCTCGCTGCTCGGAAACTTCATGGTGTTATGGTCAA...CCCAAAAGGTTGGCAAGAATCTGACAAAGATGGTTTCCTTCCGAGGAAGACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561100.2
CDS-3UTR GCA 90 bp CTCTTGTCCCCACAGAGAATAATGTGGACTTCACTAAGGACATGGATCACTGAGATGAAGATGACGACCTaGACGGTGGTGGTGAACTGG +
Preference number: 4 (lower is better)
Translates to: LLSPQRIMWTSLRTWITEMKMTT*TVVVNW
Trigger: CCAGTTCACCACCACCGTGCAGGTCGTCATCTTCAT...CTCAGTGATCCATGTCCTTAGTGAAGTCCACATTATTCTCTGTGGGGACAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp AGAGCTCATCTGGGTCAGATGTTGCCTTGGCACTCTACAATGATTATTTCTCCCTACCGGTGGTGTAGTTaGACCAGGGTCCCTATCAAG +
Preference number: 4 (lower is better)
Translates to: RAHLGQMLPWHSTMIISPYRWCS*TRVPIK
Trigger: CTTGATAGGGACCCTGGTGCAACTACACCACCGGTA...GGGAGAAATAATCATTGTAGAGTGCCAAGGCAACATCTGACCCAGATGAGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp ACAGGCATTTTCTCTGGAGCCACCATGCTCCATCATGATCTTGGAATTCCCTTATACCGGTGGTGTAGTTaGACCAGGGTCCCTATCAAG +
Preference number: 4 (lower is better)
Translates to: TGIFSGATMLHHDLGIPLYRWCS*TRVPIK
Trigger: CTTGATAGGGACCCTGGTGCAACTACACCACCGGTA...TAAGGGAATTCCAAGATCATGATGGAGCATGGTGGCTCCAGAGAAAATGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp AAGGGCAGAGCTGGCGCTTGGTTTGTCCTCACTAACAGGGAAGTATTATCTGCGTTAAAGATCTGCTGCTaGCCAATGTGGAACATCTCC +
Preference number: 4 (lower is better)
Translates to: KGRAGAWFVLTNREVLSALKICC*PMWNIS
Trigger: GGAGATGTTCCACATTGGGCAGCAGCAGATCTTTAA...CGCAGATAATACTTCCCTGTTAGTGAGGACAAACCAAGCGCCAGCTCTGCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp AGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGGGCTTAAAGATCTGCTaGTGCCCAATGTGGAACATC +
Preference number: 4 (lower is better)
Translates to: SCKEIIQSHGHSIPTLWWGLKIC*CPMWNI
Trigger: GATGTTCCACATTGGGCAGCAGCAGATCTTTAAGCC...CCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp CATGGCCACAGCATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCAACTCACACTGAGTTaGAAGGAGATCATACAATCA +
Preference number: 4 (lower is better)
Translates to: HGHSIPTLWWEYGSSPLLQLTLS*KEIIQS
Trigger: TGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTG...AAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp CTCTTGTCCCCACAGAGAATAATGTGGACTTCACTAAGGACATGGATCACTGAGACACAAAGAGGAAGGTaGTTCCTCTCCAGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: LLSPQRIMWTSLRTWITETQRGR*FLSRGR
Trigger: CCTACCCCTGGAGAGGAAGCACCTTCCTCTTTGTGT...CTCAGTGATCCATGTCCTTAGTGAAGTCCACATTATTCTCTGTGGGGACAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp GGTATCAGGAGAAACAGTGAGTCATATGACTGGGGCTTCCAGAGAAACAGTGTATGGCAGCCCCGTTTCTaGTGTGAGCAAACAGTGCTA +
Preference number: 4 (lower is better)
Translates to: GIRRNSESYDWGFQRNSVWQPRF*CEQTVL
Trigger: TAGCACTGTTTGCTCACAGCAGAAACGGGGCTGCCA...TACACTGTTTCTCTGGAAGCCCCAGTCATATGACTCACTGTTTCTCCTGATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp CTCAGGCATCTCCCCCGTAAGCTTCTCTCTCATTTGTTGAGAAAACACAATTTACGGCTCGCTGGCATTTaGAGAGATCCAGCTCCCGTT +
Preference number: 4 (lower is better)
Translates to: LRHLPRKLLSHLLRKHNLRLAGI*RDPAPV
Trigger: AACGGGAGCTGGATCTCTCCAAATGCCAGCGAGCCG...TAAATTGTGTTTTCTCAACAAATGAGAGAGAAGCTTACGGGGGAGATGCCTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp GTGAAGAGCTCATCTGGGTCAGATGTTGCCTTGGCACTCTACAATGATTATTTCCCGTGCAGGTGGACGTaGCATAGATGTCAGCCACAT +
Preference number: 4 (lower is better)
Translates to: VKSSSGSDVALALYNDYFPCRWT*HRCQPH
Trigger: ATGTGGCTGACATCTATGCCACGTCCACCTGCACGG...GAAATAATCATTGTAGAGTGCCAAGGCAACATCTGACCCAGATGAGCTCTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp GAGGACACTGGATTTTATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATCCTTCTTCTTCTGGCTaGCACTCAGGGCCCGTCGGA +
Preference number: 4 (lower is better)
Translates to: EDTGFYVDFPIIQKHLAHPSSSG*HSGPVG
Trigger: TCCGACGGGCCCTGAGTGCCAGCCAGAAGAAGAAGG...ATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATAAAATCCAGTGTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp GTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACGGCGACTGTACCGGTaGTGTAGTTGCACCAGGGTC +
Preference number: 4 (lower is better)
Translates to: VDFPIIQKHLAHIGGINSRRLYR*CSCTRV
Trigger: GACCCTGGTGCAACTACACCACCGGTACAGTCGCCG...TGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp AGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGAATATCTCCTTGGCCTaGAAGTCAGCTGAGCCAATG +
Preference number: 4 (lower is better)
Translates to: SCKEIIQSHGHSIPTLWWNISLA*KSAEPM
Trigger: CATTGGCTCAGCTGACTTCCAGGCCAAGGAGATATT...CCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp GCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATAACTCTGGTGGGAATATaGAAGCTCCCCGTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: ASGPYWRNQLTLSCKEIITLVGI*KLPVAS
Trigger: GGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGT...TATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp GGGTCCCAAATTGCTTGTGAGGCTGATGAGTTGAGGACACTGCCCTCCCTCTTCTCATTCAAAAGCATCTaGCCCATATTGGAGGAATCA +
Preference number: 4 (lower is better)
Translates to: GSQIACEADELRTLPSLFSFKSI*PILEES
Trigger: TGATTCCTCCAATATGGGCCAGATGCTTTTGAATGA...GAAGAGGGAGGGCAGTGTCCTCAACTCATCAGCCTCACAAGCAATTTGGGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp GGGTCCCAAATTGCTTGTGAGGCTGATGAGTTGAGGACACTGCCCTCCCTCTTCCATGGATCACTGAGATaGATACATATACTCCCTCAA +
Preference number: 4 (lower is better)
Translates to: GSQIACEADELRTLPSLFHGSLR*IHILPQ
Trigger: TTGAGGGAGTATATGTATCCATCTCAGTGATCCATG...GAAGAGGGAGGGCAGTGTCCTCAACTCATCAGCCTCACAAGCAATTTGGGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp GGGTCCCAAATTGCTTGTGAGGCTGATGAGTTGAGGACACTGCCCTCCCTCTTCACTTCACTAAGGACATaGATCACTGAGATGGATACA +
Preference number: 4 (lower is better)
Translates to: GSQIACEADELRTLPSLFTSLRT*ITEMDT
Trigger: TGTATCCATCTCAGTGATCCATGTCCTTAGTGAAGT...GAAGAGGGAGGGCAGTGTCCTCAACTCATCAGCCTCACAAGCAATTTGGGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp CACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAATTTACAATCCTTCTCAGAAAGTGCACATaGGGTACCCACCTCAAGACC +
Preference number: 4 (lower is better)
Translates to: HSGGNMEAPRCFQEFTILLRKCT*GTHLKT
Trigger: GGTCTTGAGGTGGGTACCCCATGTGCACTTTCTGAG...AAGGATTGTAAATTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp CCCTGTTCTGTTCCTCCTCTGTGTCCAAAATTAAGAGAGAACCGCAGCTGTACAGCACGAGTTGAGATGTaGAAGTTTGCTGGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: PCSVPPLCPKLRENRSCTARVEM*KFAGED
Trigger: GTCCTCACCAGCAAACTTCCACATCTCAACTCGTGC...TGTACAGCTGCGGTTCTCTCTTAATTTTGGACACAGAGGAGGAACAGAACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp CTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACCAAAGATGTGTCGCTaGAAAAGCCACTTGGACTCG +
Preference number: 4 (lower is better)
Translates to: LTLSCKEIIQSHGHSIPTPKMCR*KSHLDS
Trigger: CGAGTCCAAGTGGCTTTTCCAGCGACACATCTTTGG...TGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543580.7
3UTR CAA 72 bp TACCCACCTCAAGACCCATTCAAAACTGCCCAGCTCTaGTCCCCACAGAGAATAATGTGGACTTCACTAAGG +
Preference number: 4 (lower is better)
Translates to: YPPQDPFKTAQL*SPQRIMWTSLR
Trigger: CCTTAGTGAAGTCCACATTATTCTCTGTGGGGACAAGAGCTGGGCAGTTTTGAATGGGTCTTGAGGTGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR CAA 72 bp AACACTCTAGAGAAAAGGGCAGAGCTGGCGCTTGGTTaGTCCTCACTAACAGGGAAGTATTATCTGCGGTTC +
Preference number: 4 (lower is better)
Translates to: NTLEKRAELALG*SSLTGKYYLRF
Trigger: GAACCGCAGATAATACTTCCCTGTTAGTGAGGACAAACCAAGCGCCAGCTCTGCCCTTTTCTCTAGAGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp TCTGGAGCCACCATGCTCCATCATGATCTTGGAATTCCCTTAGAGTGCTCCTGCCTTTGTGCAAAAATTTaGCGACCTTGCAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: SGATMLHHDLGIPLECSCLCAKI*RPCRRA
Trigger: TGCTCTTCTGCAAGGTCGTCAAATTTTTGCACAAAG...GCAGGAGCACTCTAAGGGAATTCCAAGATCATGATGGAGCATGGTGGCTCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp AAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCCAGTGGATAGAGGACTaGGTAGTACCTGTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: KASGPYWRNQLTLSCKEIQWIED*VVPVQS
Trigger: GCTTTGGACAGGTACTACTCAGTCCTCTATCCACTG...GATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR TCA 90 bp GAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGTGCTCCTGTGAGCTCTaGAAGTCTTCTCTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: EESTHTELQGDHTITWPQCSCEL*KSSLCV
Trigger: CACACAGAGAGAAGACTTTCAGAGCTCACAGGAGCA...CTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp TCTGGAGCCACCATGCTCCATCATGATCTTGGAATTCCCTTAGAGTGCTCCTGCCTTGGCACTCTACAATaGTTATTTCTCCCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: SGATMLHHDLGIPLECSCLGTLQ*LFLPVL
Trigger: CAGAACAGGGAGAAATAATCATTGTAGAGTGCCAAG...GCAGGAGCACTCTAAGGGAATTCCAAGATCATGATGGAGCATGGTGGCTCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp CTCAGGCATCTCCCCCGTAAGCTTCTCTCTCATTTGTTGAGAAAACACAATTTAGTGGAAGTTTGCTGGTaGGGACACCCACTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: LRHLPRKLLSHLLRKHNLVEVCW*GHPLPF
Trigger: GAAGGGAAGTGGGTGTCCTCACCAGCAAACTTCCAC...TAAATTGTGTTTTCTCAACAAATGAGAGAGAAGCTTACGGGGGAGATGCCTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp ACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGAGCAAACAGTGCTATaGGGAGACCAACACAAAGAG +
Preference number: 4 (lower is better)
Translates to: TELQGDHTITWPQHSHTLEQTVL*GDQHKE
Trigger: CTCTTTGTGTTGGTCTCCTCATAGCACTGTTTGCTC...CAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp TTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAATTTACACACACTGCCTTCTCATaGAGAGACAACACCTCACAA +
Preference number: 4 (lower is better)
Translates to: FPHSGGNMEAPRCFQEFTHTAFS*RDNTSQ
Trigger: TTGTGAGGTGTTGTCTCTTCATGAGAAGGCAGTGTG...TGTAAATTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543580.7
CDS-3UTR GCA 90 bp GGGTCCCAAATTGCTTGTGAGGCTGATGAGTTGAGGACACTGCCCTCCCTCTTCGAGCAGAATACTTTGTaGAAAAATTTGACGACCTTG +
Preference number: 4 (lower is better)
Translates to: GSQIACEADELRTLPSLFEQNTL*KNLTTL
Trigger: CAAGGTCGTCAAATTTTTGCACAAAGTATTCTGCTC...GAAGAGGGAGGGCAGTGTCCTCAACTCATCAGCCTCACAAGCAATTTGGGACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp CCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACATGCTCCAGACTTCCGTaGAGGTGGACGTGGCATAGA +
Preference number: 4 (lower is better)
Translates to: PILEESTHTELQGDHTITCSRLP*RWTWHR
Trigger: TCTATGCCACGTCCACCTGCACGGAAGTCTGGAGCA...TGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp TATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACGGTGGCCCAAGGAGTTaGTCCAGACTTCCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: YVDFPIIQKHLAHIGGINGGPRS*SRLPCR
Trigger: CCTGCACGGAAGTCTGGAGCAACTCCTTGGGCCACC...GTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp TTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGATGGGGTCCGGAGCGCTaGTATGATGACCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: FKSIWPILEESTHTELQGWGPER*YDDLLL
Trigger: AAGAAGAAGGTCATCATAGCAGCGCTCCGGACCCCA...TCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp CATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGTGGGGTCCGGAGCGCTaGTATGATGACCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: HSKASGPYWRNQLTLSCKWGPER*YDDLLL
Trigger: AAGAAGAAGGTCATCATAGCAGCGCTCCGGACCCCA...CTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp TTATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAAGGCTACCCGAGCGTATaGTGGGTTCCAGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: LCRFPYHSKASGPYWRNQGYPSV*WVPGWP
Trigger: AGGCCAGCCTGGAACCCAGCATACGCTCGGGTAGCC...TTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp TATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCGGAATTCCCTTAGAGTaGTCCTGCTCCCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: YHSKASGPYWRNQLTLSCGIPLE*SCSLLL
Trigger: CAGGAGCAGGGAGCAGGAGCACTCTAAGGGAATTCC...GCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp CCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACAGGAATTCCCTTAGAGTaGTCCTGCTCCCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: PILEESTHTELQGDHTITGIPLE*SCSLLL
Trigger: CAGGAGCAGGGAGCAGGAGCACTCTAAGGGAATTCC...TGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp GAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGACTTCCCTTCAAGCTTaGTCAAGGCACCAGACTAGC +
Preference number: 4 (lower is better)
Translates to: EESTHTELQGDHTITWPQTSLQA*SRHQTS
Trigger: GCTAGTCTGGTGCCTTGAGCAAGCTTGAAGGGAAGT...CTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp CACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAATTTACAATCCGCTGTGAGCAAACAGTaGTATGAGGAGACCAACACA +
Preference number: 4 (lower is better)
Translates to: HTLVGIWKLPVASKNLQSAVSKQ*YEETNT
Trigger: TGTGTTGGTCTCCTCATAGCACTGTTTGCTCACAGC...GGATTGTAAATTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp ATTATCAGAACAACACCAAAGTGGCTACACTTGACAGATTCTCCTAAAGTGGACCGTTGTGCGGCTCGCTaGCATTTGGAGAGATCCAGC +
Preference number: 4 (lower is better)
Translates to: IIRTTPKWLHLTDSPKVDRCAAR*HLERSS
Trigger: GCTGGATCTCTCCAAATGCCAGCGAGCCGCACAACG...GTCCACTTTAGGAGAATCTGTCAAGTGTAGCCACTTTGGTGTTGTTCTGATAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp CACTGGATTTTATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGGCACACAGACCAGGCTaGCACAAATCCCCGAGCAGG +
Preference number: 4 (lower is better)
Translates to: HWILCRFPYHSKASGPYWAHRPG*HKSPSR
Trigger: CCTGCTCGGGGATTTGTGCCAGCCTGGTCTGTGTGC...CCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATAAAATCCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp CCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACAAGAACGTACACCAGGTaGCCCAAGGAGTTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PILEESTHTELQGDHTITRTYTR*PKELLQ
Trigger: CTGGAGCAACTCCTTGGGCCACCTGGTGTACGTTCT...TGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp CCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACACCACCCTGCCTACCTTaGGCACCTTTGTCTGGATCA +
Preference number: 4 (lower is better)
Translates to: PILEESTHTELQGDHTITPPCLP*APLSGS
Trigger: TGATCCAGACAAAGGTGCCCAAGGTAGGCAGGGTGG...TGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp TTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAATTCCCACACTCTGGTaGGAATATGGAAGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: FKSIWPILEESTHTELQGIPTLW*EYGSSP
Trigger: CGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAAT...TCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp CTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGGATCATACAATCACATaGCCACAGCATTCCCACACT +
Preference number: 4 (lower is better)
Translates to: LSCKEIIQSHGHSIPTLWDHTIT*PQHSHT
Trigger: AGTGTGGGAATGCTGTGGCCATGTGATTGTATGATC...CCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp TTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAAACACTGACCCTGACTaGAGGGTGCAGGTGTATCTC +
Preference number: 4 (lower is better)
Translates to: FKSIWPILEESTHTELQGNTDPD*RVQVYL
Trigger: GAGATACACCTGCACCCTCCAGTCAGGGTCAGTGTT...TCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp TCAACTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCAGTGAAGAGCTCATCTaGGTCAGATGTTGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: STHTELQGDHTITWPQHSSEELI*VRCCLG
Trigger: GCCAAGGCAACATCTGACCCAGATGAGCTCTTCACT...GGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp AGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCAGTGAAGAGCTCATCTaGGTCAGATGTTGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: RNQLTLSCKEIIQSHGHSSEELI*VRCCLG
Trigger: GCCAAGGCAACATCTGACCCAGATGAGCTCTTCACT...GCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp TTCCAGAGAAACAGTGTAAGACACCAAATCCCTACCTTCTCAACAGAAAATGTTGGCCTGGAAGTCAGCTaGGCCAATGTACTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: FQRNSVRHQIPTFSTENVGLEVS*ANVLGL
Trigger: GAGGCCAAGTACATTGGCTCAGCTGACTTCCAGGCC...AACATTTTCTGTTGAGAAGGTAGGGATTTGGTGTCTTACACTGTTTCTCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp CCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACATGTCTCTGAGAGCCACTaGGGAGGCAACTCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: PYWRNQLTLSCKEIIQSHVSESH*GGNSKG
Trigger: GCCTTTTGAGTTGCCTCCTCAGTGGCTCTCAGAGAC...ATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR TCA 90 bp GTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCAGTCTCTGAGAGCCACTaGGGAGGCAACTCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: VDFPIIQKHLAHIGGINSVSESH*GGNSKG
Trigger: GCCTTTTGAGTTGCCTCCTCAGTGGCTCTCAGAGAC...TGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR TCA 90 bp AGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGGAATATGCACCATGCTCCATCATaGTCTTGGAATTCCCTTAGA +
Preference number: 4 (lower is better)
Translates to: RRSYNHMATAFPHSGGNMHHAPS*SWNSLR
Trigger: TCTAAGGGAATTCCAAGATCATGATGGAGCATGGTG...CATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp ACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCCACCATGCTCCATCATaGTCTTGGAATTCCCTTAGA +
Preference number: 4 (lower is better)
Translates to: TLSCKEIIQSHGHSIPTLHHAPS*SWNSLR
Trigger: TCTAAGGGAATTCCAAGATCATGATGGAGCATGGTG...GAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp AGAGCTCATCTGGGTCAGATGTTGCCTTGGCACTCTACAATGATTATTTCTCCCCAGGCCTTTTCAGTTTaGTGTTTCCAAAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: RAHLGQMLPWHSTMIISPQAFSV*CFQRTQ
Trigger: CTGGGTCCTTTGGAAACATCAAACTGAAAAGGCCTG...GGGAGAAATAATCATTGTAGAGTGCCAAGGCAACATCTGACCCAGATGAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp TCCCTGTTCTGTTCCTCCTCTGTGTCCAAAATTAAGAGAGAACCGCAGCTGTACCAAAGTGGCTACACTTaGCAGATTCTCCTAAAGTGG +
Preference number: 4 (lower is better)
Translates to: SLFCSSSVSKIKREPQLYQSGYT*QILLKW
Trigger: CCACTTTAGGAGAATCTGTCAAGTGTAGCCACTTTG...GTACAGCTGCGGTTCTCTCTTAATTTTGGACACAGAGGAGGAACAGAACAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp CATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGGCCCAAAGCCAAACTaGAGGGAATACTTATCAGGG +
Preference number: 4 (lower is better)
Translates to: HSKASGPYWRNQLTLSCKGPKPN*REYLSG
Trigger: CCCTGATAAGTATTCCCTGCAGTTTGGCTTTGGGCC...CTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp TATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCTTCCGCTCCACCCTaGCTACCTTGGGCACCTTTG +
Preference number: 4 (lower is better)
Translates to: YVDFPIIQKHLAHIGGINSSAPP*LPWAPL
Trigger: CAAAGGTGCCCAAGGTAGGCAGGGTGGAGCGGAAGA...GTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp AAGGGCAGAGCTGGCGCTTGGTTTGTCCTCACTAACAGGGAAGTATTATCTGCGCAACTCACACTGAGTTaGAAGGAGATCATACAATCA +
Preference number: 4 (lower is better)
Translates to: KGRAGAWFVLTNREVLSAQLTLS*KEIIQS
Trigger: TGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTG...CGCAGATAATACTTCCCTGTTAGTGAGGACAAACCAAGCGCCAGCTCTGCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp GTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCAGGCATCCTCAGAAAGTaGACATGGGGTACCCACCTC +
Preference number: 4 (lower is better)
Translates to: VDFPIIQKHLAHIGGINSGILRK*TWGTHL
Trigger: GAGGTGGGTACCCCATGTGCACTTTCTGAGGATGCC...TGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp AGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCTCTCTGGAGCCACCATaGTCCATCATGATCTTGGAA +
Preference number: 4 (lower is better)
Translates to: RNQLTLSCKEIIQSHGHSSLEPP*SIMILE
Trigger: TTCCAAGATCATGATGGAGCATGGTGGCTCCAGAGA...GCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp ATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTACCCTGACTGGAGGGTaGAGGTGTATCTCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: ISLSFKSIWPILEESTHTTLTGG*RCISLR
Trigger: CCTCAGAGAGATACACCTGCACCCTCCAGTCAGGGT...AGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp TTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAACTTCCCTTCAAGCTTaGTCAAGGCACCAGACTAGC +
Preference number: 4 (lower is better)
Translates to: FKSIWPILEESTHTELQGTSLQA*SRHQTS
Trigger: GCTAGTCTGGTGCCTTGAGCAAGCTTGAAGGGAAGT...TCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp CTCAGGCATCTCCCCCGTAAGCTTCTCTCTCATTTGTTGAGAAAACACAATTTAACACAAAGAGGAAGGTaGTTCCTCTCCAGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: LRHLPRKLLSHLLRKHNLTQRGR*FLSRGR
Trigger: CCTACCCCTGGAGAGGAAGCACCTTCCTCTTTGTGT...TAAATTGTGTTTTCTCAACAAATGAGAGAGAAGCTTACGGGGGAGATGCCTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp CACTGGATTTTATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGGCAAGGAGCTATAGATaGCATGCACGCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: HWILCRFPYHSKASGPYWARSYR*HARRAQ
Trigger: CTGGGCCCTGCGTGCATGGCATCTATAGCTCCTTGC...CCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATAAAATCCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp TCCCTGTTCTGTTCCTCCTCTGTGTCCAAAATTAAGAGAGAACCGCAGCTGTACCCAGTTCACGGGACTTaGCATCAGATATTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SLFCSSSVSKIKREPQLYPVHGT*HQIFSS
Trigger: AGAGGAAAATATCTGATGCCAAGTCCCGTGAACTGG...GTACAGCTGCGGTTCTCTCTTAATTTTGGACACAGAGGAGGAACAGAACAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp ACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGCCAGTTCACGGGACTTaGCATCAGATATTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: TELQGDHTITWPQHSHTLPVHGT*HQIFSS
Trigger: AGAGGAAAATATCTGATGCCAAGTCCCGTGAACTGG...CAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp TCGGAAGGAAACCATCTTTGTCAGATTCTTGCCAACCTTTTGGGCAGAGTCACCAGATGTCAGCCACATTaGTTACTGCAAACACAGGGA +
Preference number: 4 (lower is better)
Translates to: SEGNHLCQILANLLGRVTRCQPH*LLQTQG
Trigger: TCCCTGTGTTTGCAGTAACCAATGTGGCTGACATCT...GGTGACTCTGCCCAAAAGGTTGGCAAGAATCTGACAAAGATGGTTTCCTTCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp CTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACAAGATGTCAGCCACATTaGTTACTGCAAACACAGGGA +
Preference number: 4 (lower is better)
Translates to: LTLSCKEIIQSHGHSIPTRCQPH*LLQTQG
Trigger: TCCCTGTGTTTGCAGTAACCAATGTGGCTGACATCT...TGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp AGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCCTGAGCCAATGTACTTaGCCTCACTCTCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: RNQLTLSCKEIIQSHGHSLSQCT*PHSLPH
Trigger: ATGAGGAAGAGAGTGAGGCCAAGTACATTGGCTCAG...GCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp AGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATCTGAGCCAATGTACTTaGCCTCACTCTCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: SIWPILEESTHTELQGDHLSQCT*PHSLPH
Trigger: ATGAGGAAGAGAGTGAGGCCAAGTACATTGGCTCAG...ATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp ATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTCCACCCTGCCTACCTTaGGCACCTTTGTCTGGATCA +
Preference number: 4 (lower is better)
Translates to: ISLSFKSIWPILEESTHTPPCLP*APLSGS
Trigger: TGATCCAGACAAAGGTGCCCAAGGTAGGCAGGGTGG...AGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp CCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACAATTCCCACACTCTGGTaGGAATATGGAAGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: PILEESTHTELQGDHTITIPTLW*EYGSSP
Trigger: CGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAAT...TGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp CTCTTGTCCCCACAGAGAATAATGTGGACTTCACTAAGGACATGGATCACTGAGGCATCTGGCCCATATTaGAGGAATCAACTCACACTG +
Preference number: 4 (lower is better)
Translates to: LLSPQRIMWTSLRTWITEASGPY*RNQLTL
Trigger: CAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGC...CTCAGTGATCCATGTCCTTAGTGAAGTCCACATTATTCTCTGTGGGGACAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp CACTGGATTTTATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGTGCCACTCCCTGTACTaGCCACATTACGGCGACTGT +
Preference number: 4 (lower is better)
Translates to: HWILCRFPYHSKASGPYWCHSLY*PHYGDC
Trigger: ACAGTCGCCGTAATGTGGTCAGTACAGGGAGTGGCA...CCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATAAAATCCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR TCA 90 bp AAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCGGAATCAACTCACACTaGGTTGCAAGGAGATCATAC +
Preference number: 4 (lower is better)
Translates to: KASGPYWRNQLTLSCKEIGINSH*VARRSY
Trigger: GTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCC...GATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR TCA 90 bp CTCAGGCATCTCCCCCGTAAGCTTCTCTCTCATTTGTTGAGAAAACACAATTTATCTCTGAGGCGTTGGTaGTGCCAAGGGAAAATCAGA +
Preference number: 4 (lower is better)
Translates to: LRHLPRKLLSHLLRKHNLSLRRW*CQGKIR
Trigger: TCTGATTTTCCCTTGGCATCACCAACGCCTCAGAGA...TAAATTGTGTTTTCTCAACAAATGAGAGAGAAGCTTACGGGGGAGATGCCTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp CAGAGAATAATGTGGACTTCACTAAGGACATGGATCACTGAGATGGATACATATGAAGGGCCACAGCATTaGCTATCAGGGCAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: QRIMWTSLRTWITEMDTYEGPQH*LSGQGA
Trigger: AGCTCCTTGCCCTGATAGTCAATGCTGTGGCCCTTC...ATATGTATCCATCTCAGTGATCCATGTCCTTAGTGAAGTCCACATTATTCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp TCAACTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCAAATACACCTGGCAATaGCCTGTTAGTAGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: STHTELQGDHTITWPQHSKYTWQ*PVSSQP
Trigger: TGGCTGACTACTAACAGGTCATTGCCAGGTGTATTT...GGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp TATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACGACACTGGCCACCACTaGATGGGCCCAGATGTACAT +
Preference number: 4 (lower is better)
Translates to: YVDFPIIQKHLAHIGGINDTGHH*MGPDVH
Trigger: ATGTACATCTGGGCCCATGCAGTGGTGGCCAGTGTC...GTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp TATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTGCTCCAGACTTCCGTaGAGGTGGACGTGGCATAGA +
Preference number: 4 (lower is better)
Translates to: YVDFPIIQKHLAHIGGINCSRLP*RWTWHR
Trigger: TCTATGCCACGTCCACCTGCACGGAAGTCTGGAGCA...GTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp GTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCATACCGGTGGTGTAGTTaGACCAGGGTCCCTATCAAG +
Preference number: 4 (lower is better)
Translates to: VDFPIIQKHLAHIGGINSYRWCS*TRVPIK
Trigger: CTTGATAGGGACCCTGGTGCAACTACACCACCGGTA...TGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp CCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACAGTGGGCTTAAAGATCTaGTGCTGCCCAATGTGGAAC +
Preference number: 4 (lower is better)
Translates to: PILEESTHTELQGDHTITVGLKI*CCPMWN
Trigger: GTTCCACATTGGGCAGCAGCAGATCTTTAAGCCCAC...TGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp AGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATTCACTTTATTGTTTCTaGTCATCTTCCGCTCCACCC +
Preference number: 4 (lower is better)
Translates to: SIWPILEESTHTELQGDHSLYCF*SSSAPP
Trigger: GGGTGGAGCGGAAGATGAGCAGAAACAATAAAGTGA...ATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp CTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACAATGGAAGCTCCCCGTTaGTTCCAAGAATTTACAATC +
Preference number: 4 (lower is better)
Translates to: LTLSCKEIIQSHGHSIPTMEAPR*FQEFTI
Trigger: GATTGTAAATTCTTGGAAGCAACGGGGAGCTTCCAT...TGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp GGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCATCTCTGGAGCCACCATaGTCCATCATGATCTTGGAA +
Preference number: 4 (lower is better)
Translates to: GPYWRNQLTLSCKEIIQSSLEPP*SIMILE
Trigger: TTCCAAGATCATGATGGAGCATGGTGGCTCCAGAGA...TGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp TCAACTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCCAGTTCACGGGACTTaGCATCAGATATTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: STHTELQGDHTITWPQHSPVHGT*HQIFSS
Trigger: AGAGGAAAATATCTGATGCCAAGTCCCGTGAACTGG...GGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp CACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAATTTACAATCCTTAGATGTCAGCCACATTaGTTACTGCAAACACAGGGA +
Preference number: 4 (lower is better)
Translates to: HSGGNMEAPRCFQEFTILRCQPH*LLQTQG
Trigger: TCCCTGTGTTTGCAGTAACCAATGTGGCTGACATCT...AAGGATTGTAAATTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp GAGGACACTGGATTTTATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATAGACTTCCGTGCAGGTaGACGTGGCATAGATGTCAG +
Preference number: 4 (lower is better)
Translates to: EDTGFYVDFPIIQKHLAHRLPCR*TWHRCQ
Trigger: CTGACATCTATGCCACGTCCACCTGCACGGAAGTCT...ATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATAAAATCCAGTGTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp CACTGGATTTTATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGTGCTGCTGCCCAATGTaGAACATCTCCAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: HWILCRFPYHSKASGPYWCCCPM*NISRSW
Trigger: CCAGCTCCTGGAGATGTTCCACATTGGGCAGCAGCA...CCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATAAAATCCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp GAGGACACTGGATTTTATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATTTGGGCACCTTTGTCTaGATCAGCTCTTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: EDTGFYVDFPIIQKHLAHLGTFV*ISSSGV
Trigger: CACCCCAGAAGAGCTGATCCAGACAAAGGTGCCCAA...ATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATAAAATCCAGTGTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp TTCCAGAGAAACAGTGTAAGACACCAAATCCCTACCTTCTCAACAGAAAATGTTCCACCCTGCCTACCTTaGGCACCTTTGTCTGGATCA +
Preference number: 4 (lower is better)
Translates to: FQRNSVRHQIPTFSTENVPPCLP*APLSGS
Trigger: TGATCCAGACAAAGGTGCCCAAGGTAGGCAGGGTGG...AACATTTTCTGTTGAGAAGGTAGGGATTTGGTGTCTTACACTGTTTCTCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp AATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTAGCATTCCCACACTCTaGTGGGAATATGGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: NQLTLSCKEIIQSHGHSISIPTL*WEYGSS
Trigger: GGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCT...AATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp TTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGCATCTGGCCCATATTaGAGGAATCAACTCACACTG +
Preference number: 4 (lower is better)
Translates to: FKSIWPILEESTHTELQGASGPY*RNQLTL
Trigger: CAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGC...TCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp ATGTGTACCATAGGTGAGGAATCGTCATTCCTTACCTACATCCCAATGAAAGGGAACAGGCATTTTCTCTaGAGCCACCATGCTCCATCA +
Preference number: 4 (lower is better)
Translates to: MCTIGEESSFLTYIPMKGNRHFL*SHHAPS
Trigger: TGATGGAGCATGGTGGCTCCAGAGAAAATGCCTGTT...CCCTTTCATTGGGATGTAGGTAAGGAATGACGATTCCTCACCTATGGTACACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp AGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGGAATATGGAAAGTGAGTCATATGACTaGGGCTTCCAGAGAAACAGT +
Preference number: 4 (lower is better)
Translates to: RSYNHMATAFPHSGGNMESESYD*GFQRNS
Trigger: ACTGTTTCTCTGGAAGCCCCAGTCATATGACTCACT...TTCCATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp AAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCTTCTTGCCAACCTTTTaGGCAGAGTCACCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: KASGPYWRNQLTLSCKEIFLPTF*AESPFQ
Trigger: TTGGAAAGGTGACTCTGCCCAAAAGGTTGGCAAGAA...GATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp CTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGGGTCAGATGTTGCCTTaGCACTCTACAATGATTATT +
Preference number: 4 (lower is better)
Translates to: LSCKEIIQSHGHSIPTLWGQMLP*HSTMII
Trigger: AATAATCATTGTAGAGTGCCAAGGCAACATCTGACC...CCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp CTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGAGAACAACACCAAAGTaGCTACACTTGACAGATTCT +
Preference number: 4 (lower is better)
Translates to: LSCKEIIQSHGHSIPTLWRTTPK*LHLTDS
Trigger: AGAATCTGTCAAGTGTAGCCACTTTGGTGTTGTTCT...CCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
3UTR CAA 72 bp AGTCTTCCTCGGAAGGAAACCATCTTTGTCAGATTCTaGCCAACCTTTTGGGCAGAGTCACCTTTCCAAATC +
Preference number: 4 (lower is better)
Translates to: SLPRKETIFVRF*PTFWAESPFQI
Trigger: GATTTGGAAAGGTGACTCTGCCCAAAAGGTTGGCAAGAATCTGACAAAGATGGTTTCCTTCCGAGGAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp TTATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAAATCCACCAGCAACAGTaGGGACTGGTGCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: LCRFPYHSKASGPYWRNQIHQQQ*GLVLRM
Trigger: CATCCTCAGCACCAGTCCTCACTGTTGCTGGTGGAT...TTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR TCA 90 bp GAGGACACTGGATTTTATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATCAGTGGATAGAGGACTaGGTAGTACCTGTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: EDTGFYVDFPIIQKHLAHQWIED*VVPVQS
Trigger: GCTTTGGACAGGTACTACTCAGTCCTCTATCCACTG...ATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATAAAATCCAGTGTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR TCA 90 bp CATCAAACAGGCATTTTCTCTGGAGCCACCATGCTCCATCATGATCTTGGAATTCATGTGTACCATAGGTaGGGAATCGTCATTCCTTAC +
Preference number: 4 (lower is better)
Translates to: HQTGIFSGATMLHHDLGIHVYHR*GIVIPY
Trigger: GTAAGGAATGACGATTCCTCACCTATGGTACACATG...AATTCCAAGATCATGATGGAGCATGGTGGCTCCAGAGAAAATGCCTGTTTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp CATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGCAAAGTGGCTACACTTaGCAGATTCTCCTAAAGTGG +
Preference number: 4 (lower is better)
Translates to: HSKASGPYWRNQLTLSCKQSGYT*QILLKW
Trigger: CCACTTTAGGAGAATCTGTCAAGTGTAGCCACTTTG...CTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp ATGTGTACCATAGGTGAGGAATCGTCATTCCTTACCTACATCCCAATGAAAGGGTTAAAGATCTGCTGCTaGCCAATGTGGAACATCTCC +
Preference number: 4 (lower is better)
Translates to: MCTIGEESSFLTYIPMKGLKICC*PMWNIS
Trigger: GGAGATGTTCCACATTGGGCAGCAGCAGATCTTTAA...CCCTTTCATTGGGATGTAGGTAAGGAATGACGATTCCTCACCTATGGTACACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp CATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGTTAAAGATCTGCTGCTaGCCAATGTGGAACATCTCC +
Preference number: 4 (lower is better)
Translates to: HSKASGPYWRNQLTLSCKLKICC*PMWNIS
Trigger: GGAGATGTTCCACATTGGGCAGCAGCAGATCTTTAA...CTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp TTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGATCACTTTATTGTTTCTaGTCATCTTCCGCTCCACCC +
Preference number: 4 (lower is better)
Translates to: FKSIWPILEESTHTELQGSLYCF*SSSAPP
Trigger: GGGTGGAGCGGAAGATGAGCAGAAACAATAAAGTGA...TCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp AGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGGAATATGGAACAGGGAAGTATTATCTaGGGTTCTAATTCAACCTGG +
Preference number: 4 (lower is better)
Translates to: RSYNHMATAFPHSGGNMEQGSII*GSNSTW
Trigger: CCAGGTTGAATTAGAACCGCAGATAATACTTCCCTG...TTCCATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp TTATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAAAGAGATGGTGTTCTGTaGGGTCCGGAGCGCTGCTAT +
Preference number: 4 (lower is better)
Translates to: LCRFPYHSKASGPYWRNQRDGVL*GPERCY
Trigger: ATAGCAGCGCTCCGGACCCCACAGAACACCATCTCT...TTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp ATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTAGCATTCCCACACTCTaGTGGGAATATGGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: ISLSFKSIWPILEESTHTSIPTL*WEYGSS
Trigger: GGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCT...AGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp TTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAATTTACAACTTCACTAAGGACATaGATCACTGAGATGGATACA +
Preference number: 4 (lower is better)
Translates to: FPHSGGNMEAPRCFQEFTTSLRT*ITEMDT
Trigger: TGTATCCATCTCAGTGATCCATGTCCTTAGTGAAGT...TGTAAATTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp AATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTAACAGGCATTTTCTCTaGAGCCACCATGCTCCATCA +
Preference number: 4 (lower is better)
Translates to: NQLTLSCKEIIQSHGHSINRHFL*SHHAPS
Trigger: TGATGGAGCATGGTGGCTCCAGAGAAAATGCCTGTT...AATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp ACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCGGTCAGATGTTGCCTTaGCACTCTACAATGATTATT +
Preference number: 4 (lower is better)
Translates to: TLSCKEIIQSHGHSIPTLGQMLP*HSTMII
Trigger: AATAATCATTGTAGAGTGCCAAGGCAACATCTGACC...GAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp CATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGAAGGACATGGATCACTaGGATGGATACATATACTCC +
Preference number: 4 (lower is better)
Translates to: HSKASGPYWRNQLTLSCKKDMDH*DGYIYS
Trigger: GGAGTATATGTATCCATCTCAGTGATCCATGTCCTT...CTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp CACTGGATTTTATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGGCTGTACAAACAGACTaGAAAGGAGACTGGCCACAC +
Preference number: 4 (lower is better)
Translates to: HWILCRFPYHSKASGPYWAVQTD*KGDWPH
Trigger: GTGTGGCCAGTCTCCTTTTCAGTCTGTTTGTACAGC...CCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATAAAATCCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp GTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCAGGCTTAAAGATCTGCTaGTGCCCAATGTGGAACATC +
Preference number: 4 (lower is better)
Translates to: VDFPIIQKHLAHIGGINSGLKIC*CPMWNI
Trigger: GATGTTCCACATTGGGCAGCAGCAGATCTTTAAGCC...TGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp TATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACGTGGGCTTAAAGATCTaGTGCTGCCCAATGTGGAAC +
Preference number: 4 (lower is better)
Translates to: YVDFPIIQKHLAHIGGINVGLKI*CCPMWN
Trigger: GTTCCACATTGGGCAGCAGCAGATCTTTAAGCCCAC...GTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp TATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACGGCCCAAAGCCAAACTaGAGGGAATACTTATCAGGG +
Preference number: 4 (lower is better)
Translates to: YVDFPIIQKHLAHIGGINGPKPN*REYLSG
Trigger: CCCTGATAAGTATTCCCTGCAGTTTGGCTTTGGGCC...GTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp CAGAGAATAATGTGGACTTCACTAAGGACATGGATCACTGAGATGGATACATATGGCCCAAAGCCAAACTaGAGGGAATACTTATCAGGG +
Preference number: 4 (lower is better)
Translates to: QRIMWTSLRTWITEMDTYGPKPN*REYLSG
Trigger: CCCTGATAAGTATTCCCTGCAGTTTGGCTTTGGGCC...ATATGTATCCATCTCAGTGATCCATGTCCTTAGTGAAGTCCACATTATTCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp TCAACTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCAACTCACACTGAGTTaGAAGGAGATCATACAATCA +
Preference number: 4 (lower is better)
Translates to: STHTELQGDHTITWPQHSQLTLS*KEIIQS
Trigger: TGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTG...GGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp ATTTTATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATGGCATCCTCAGAAAGTaGACATGGGGTACCCACCTC +
Preference number: 4 (lower is better)
Translates to: ILCRFPYHSKASGPYWRNGILRK*TWGTHL
Trigger: GAGGTGGGTACCCCATGTGCACTTTCTGAGGATGCC...ATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp ATTTTATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATAGAGATGGTGTTCTGTaGGGTCCGGAGCGCTGCTAT +
Preference number: 4 (lower is better)
Translates to: ILCRFPYHSKASGPYWRNRDGVL*GPERCY
Trigger: ATAGCAGCGCTCCGGACCCCACAGAACACCATCTCT...ATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp GTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACTGAGCCAATGTACTTaGCCTCACTCTCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: VDFPIIQKHLAHIGGINSLSQCT*PHSLPH
Trigger: ATGAGGAAGAGAGTGAGGCCAAGTACATTGGCTCAG...TGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp AGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGGAATATGGAACATGGATCACTGAGATaGATACATATACTCCCTCAA +
Preference number: 4 (lower is better)
Translates to: RSYNHMATAFPHSGGNMEHGSLR*IHILPQ
Trigger: TTGAGGGAGTATATGTATCCATCTCAGTGATCCATG...TTCCATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp CTCAGGCATCTCCCCCGTAAGCTTCTCTCTCATTTGTTGAGAAAACACAATTTAAGTGAGTCATATGACTaGGGCTTCCAGAGAAACAGT +
Preference number: 4 (lower is better)
Translates to: LRHLPRKLLSHLLRKHNLSESYD*GFQRNS
Trigger: ACTGTTTCTCTGGAAGCCCCAGTCATATGACTCACT...TAAATTGTGTTTTCTCAACAAATGAGAGAGAAGCTTACGGGGGAGATGCCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp ATTTTATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATGGCAGAGCTGGCGCTTaGTTTGTCCTCACTAACAGG +
Preference number: 4 (lower is better)
Translates to: ILCRFPYHSKASGPYWRNGRAGA*FVLTNR
Trigger: CCTGTTAGTGAGGACAAACCAAGCGCCAGCTCTGCC...ATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp CCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACATTTGAACTCCAGAGCCTaGGATGTGATCACTACGTCA +
Preference number: 4 (lower is better)
Translates to: PYWRNQLTLSCKEIIQSHLNSRA*DVITTS
Trigger: TGACGTAGTGATCACATCCCAGGCTCTGGAGTTCAA...ATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543580.7
CDS-3UTR TCA 90 bp GAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGAAACACAATTTAAGGTaGAAGACAGAGCGAAGACTT +
Preference number: 4 (lower is better)
Translates to: EESTHTELQGDHTITWPQKHNLR*KTERRL
Trigger: AAGTCTTCGCTCTGTCTTTCACCTTAAATTGTGTTT...CTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp CTCTTGTCCCCACAGAGAATAATGTGGACTTCACTAAGGACATGGATCACTGAGAAACACAATTTAAGGTaGAAGACAGAGCGAAGACTT +
Preference number: 4 (lower is better)
Translates to: LLSPQRIMWTSLRTWITEKHNLR*KTERRL
Trigger: AAGTCTTCGCTCTGTCTTTCACCTTAAATTGTGTTT...CTCAGTGATCCATGTCCTTAGTGAAGTCCACATTATTCTCTGTGGGGACAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp TTATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAAGTGGGCTTAAAGATCTaGTGCTGCCCAATGTGGAAC +
Preference number: 4 (lower is better)
Translates to: LCRFPYHSKASGPYWRNQVGLKI*CCPMWN
Trigger: GTTCCACATTGGGCAGCAGCAGATCTTTAAGCCCAC...TTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp CCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACAATGGAAGCTCCCCGTTaGTTCCAAGAATTTACAATC +
Preference number: 4 (lower is better)
Translates to: PILEESTHTELQGDHTITMEAPR*FQEFTI
Trigger: GATTGTAAATTCTTGGAAGCAACGGGGAGCTTCCAT...TGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp CACTGGATTTTATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGGCATCTGGCCCATATTaGAGGAATCAACTCACACTG +
Preference number: 4 (lower is better)
Translates to: HWILCRFPYHSKASGPYWASGPY*RNQLTL
Trigger: CAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGC...CCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATAAAATCCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR TCA 90 bp TATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTTACCTACATCCCAATaGAAGGGACGAAGGGTATCA +
Preference number: 4 (lower is better)
Translates to: YVDFPIIQKHLAHIGGINLPTSQ*KGRRVS
Trigger: TGATACCCTTCGTCCCTTTCATTGGGATGTAGGTAA...GTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR TCA 90 bp ATTTTATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATTCTAATTCAACCTGGTaGAATCCACCCCAGAGGGGT +
Preference number: 4 (lower is better)
Translates to: ILCRFPYHSKASGPYWRNSNSTW*NPPQRG
Trigger: ACCCCTCTGGGGTGGATTTCACCAGGTTGAATTAGA...ATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp CATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGCAGAATACTTTGTaGAAAAATTTGACGACCTTG +
Preference number: 4 (lower is better)
Translates to: HSKASGPYWRNQLTLSCKEQNTL*KNLTTL
Trigger: CAAGGTCGTCAAATTTTTGCACAAAGTATTCTGCTC...CTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp CAGAGAATAATGTGGACTTCACTAAGGACATGGATCACTGAGATGGATACATATTCACTTTATTGTTTCTaGTCATCTTCCGCTCCACCC +
Preference number: 4 (lower is better)
Translates to: QRIMWTSLRTWITEMDTYSLYCF*SSSAPP
Trigger: GGGTGGAGCGGAAGATGAGCAGAAACAATAAAGTGA...ATATGTATCCATCTCAGTGATCCATGTCCTTAGTGAAGTCCACATTATTCTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp ATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTATGGAAGCTCCCCGTTaGTTCCAAGAATTTACAATC +
Preference number: 4 (lower is better)
Translates to: ISLSFKSIWPILEESTHTMEAPR*FQEFTI
Trigger: GATTGTAAATTCTTGGAAGCAACGGGGAGCTTCCAT...AGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR GCA 90 bp GAGGACACTGGATTTTATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATCAGGGAAGTATTATCTaGGGTTCTAATTCAACCTGG +
Preference number: 4 (lower is better)
Translates to: EDTGFYVDFPIIQKHLAHQGSII*GSNSTW
Trigger: CCAGGTTGAATTAGAACCGCAGATAATACTTCCCTG...ATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATAAAATCCAGTGTCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp CACTGGATTTTATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGGATCATACAATCACATaGCCACAGCATTCCCACACT +
Preference number: 4 (lower is better)
Translates to: HWILCRFPYHSKASGPYWDHTIT*PQHSHT
Trigger: AGTGTGGGAATGCTGTGGCCATGTGATTGTATGATC...CCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATAAAATCCAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp ATTTTATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCTCTTCTACCCAGTCTaGCTCTACAACGACAGGGAA +
Preference number: 4 (lower is better)
Translates to: ILCRFPYHSKASGPYWRNLFYPV*LYNDRE
Trigger: TTCCCTGTCGTTGTAGAGCCAGACTGGGTAGAAGAG...ATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp TATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAGAACAACACCAAAGTaGCTACACTTGACAGATTCT +
Preference number: 4 (lower is better)
Translates to: YHSKASGPYWRNQLTLSCRTTPK*LHLTDS
Trigger: AGAATCTGTCAAGTGTAGCCACTTTGGTGTTGTTCT...GCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp GTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCAAGAAATAAGAAGCAGTaGAGCTGGCATTCAGACAGA +
Preference number: 4 (lower is better)
Translates to: VDFPIIQKHLAHIGGINSRNKKQ*SWHSDR
Trigger: TCTGTCTGAATGCCAGCTCCACTGCTTCTTATTTCT...TGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543580.7
CDS-3UTR TCA 90 bp TATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACCTTTGTGCAAAAATTTaGCGACCTTGCAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: YVDFPIIQKHLAHIGGINLCAKI*RPCRRA
Trigger: TGCTCTTCTGCAAGGTCGTCAAATTTTTGCACAAAG...GTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR TCA 90 bp CACTGGATTTTATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGCTTGGCACTCTACAATaGTTATTTCTCCCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: HWILCRFPYHSKASGPYWLGTLQ*LFLPVL
Trigger: CAGAACAGGGAGAAATAATCATTGTAGAGTGCCAAG...CCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATAAAATCCAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp ATTTTATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATGCTGTGAGCAAACAGTaGTATGAGGAGACCAACACA +
Preference number: 4 (lower is better)
Translates to: ILCRFPYHSKASGPYWRNAVSKQ*YEETNT
Trigger: TGTGTTGGTCTCCTCATAGCACTGTTTGCTCACAGC...ATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp CAGAGAATAATGTGGACTTCACTAAGGACATGGATCACTGAGATGGATACATATTCATTCAAAAGCATCTaGCCCATATTGGAGGAATCA +
Preference number: 4 (lower is better)
Translates to: QRIMWTSLRTWITEMDTYSFKSI*PILEES
Trigger: TGATTCCTCCAATATGGGCCAGATGCTTTTGAATGA...ATATGTATCCATCTCAGTGATCCATGTCCTTAGTGAAGTCCACATTATTCTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CCA 90 bp TATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCATTCAAAAGCATCTaGCCCATATTGGAGGAATCA +
Preference number: 4 (lower is better)
Translates to: YVDFPIIQKHLAHIGGINSFKSI*PILEES
Trigger: TGATTCCTCCAATATGGGCCAGATGCTTTTGAATGA...GTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CCA 90 bp ATTTTATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATTTCTTGCCAACCTTTTaGGCAGAGTCACCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: ILCRFPYHSKASGPYWRNFLPTF*AESPFQ
Trigger: TTGGAAAGGTGACTCTGCCCAAAAGGTTGGCAAGAA...ATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR GCA 90 bp TATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACGAGCAGAATACTTTGTaGAAAAATTTGACGACCTTG +
Preference number: 4 (lower is better)
Translates to: YVDFPIIQKHLAHIGGINEQNTL*KNLTTL
Trigger: CAAGGTCGTCAAATTTTTGCACAAAGTATTCTGCTC...GTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS GCA 90 bp AGCGCGCTGCGGTTCACACCCGCAGCCTCGGCGCCGGACGCGTTGTaGGGCTCGCTGGCATTTGGAGAGATCCAGCTCCCGTTATGTCCC +
Preference number: 5 (lower is better)
Translates to: SALRFTPAASAPDAL*GSLAFGEIQLPLCP
Trigger: GGGACATAACGGGAGCTGGATCTCTCCAAATGCCAGCGAGCCGCACAACGCGTCCGGCGCCGAGGCTGCGGGTGTGAACCGCAGCGCGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS CCA 90 bp GGCTGCCGGTGCCACCTGGGATACAGAGTCCACTGTGCTCAGGGGTaGGGCAGAGGGCGCAAACTGTGGCCCCTGCTCTCCCTCCAGGCA +
Preference number: 5 (lower is better)
Translates to: GCRCHLGYRVHCAQG*GRGRKLWPLLSLQA
Trigger: TGCCTGGAGGGAGAGCAGGGGCCACAGTTTGCGCCCTCTGCCCCACCCCTGAGCACAGTGGACTCTGTATCCCAGGTGGCACCGGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS CCA 90 bp ACCCGCAGCCTCGGCGCCGGACGCGTTGTGCGGCTCGCTGGCATTTaGAGAGATCCAGCTCCCGTTATGTCCCATGGCGAGGCTGGGACT +
Preference number: 5 (lower is better)
Translates to: TRSLGAGRVVRLAGI*RDPAPVMSHGEAGT
Trigger: AGTCCCAGCCTCGCCATGGGACATAACGGGAGCTGGATCTCTCCAAATGCCAGCGAGCCGCACAACGCGTCCGGCGCCGAGGCTGCGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS CCA 90 bp GGTTCACACCCGCAGCCTCGGCGCCGGACGCGTTGTGCGGCTCGCTaGCATTTGGAGAGATCCAGCTCCCGTTATGTCCCATGGCGAGGC +
Preference number: 5 (lower is better)
Translates to: GSHPQPRRRTRCAAR*HLERSSSRYVPWRG
Trigger: GCCTCGCCATGGGACATAACGGGAGCTGGATCTCTCCAAATGCCAGCGAGCCGCACAACGCGTCCGGCGCCGAGGCTGCGGGTGTGAACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS CCA 90 bp AGCAGCGAGCCTATGAAGATGACGACCTGCACGGTGGTGGTGAACTaGCGGTACAGCTGCGCCTCGCCGAACTCCCCGAGCGCGCTGCGG +
Preference number: 5 (lower is better)
Translates to: SSEPMKMTTCTVVVN*RYSCASPNSPSALR
Trigger: CCGCAGCGCGCTCGGGGAGTTCGGCGAGGCGCAGCTGTACCGCCAGTTCACCACCACCGTGCAGGTCGTCATCTTCATAGGCTCGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000558041.5
ENST00000561100.2
CDS GCA 90 bp ATGAAGATGACGACCTGCACGGTGGTGGTGAACTGGCGGTACAGCTaGGCCTCGCCGAACTCCCCGAGCGCGCTGCGGTTCACACCCGCA +
Preference number: 5 (lower is better)
Translates to: MKMTTCTVVVNWRYS*ASPNSPSALRFTPA
Trigger: TGCGGGTGTGAACCGCAGCGCGCTCGGGGAGTTCGGCGAGGCGCAGCTGTACCGCCAGTTCACCACCACCGTGCAGGTCGTCATCTTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS TCA 90 bp CAGTCTGGTAGACGACCAGGGTGGCATAGGGCACGCTACACAAGATaGAGACCATCACCATGGAGAGCAGGGTGGCGTGCAGCTCGGCCT +
Preference number: 5 (lower is better)
Translates to: QSGRRPGWHRARYTR*RPSPWRAGWRAARP
Trigger: AGGCCGAGCTGCACGCCACCCTGCTCTCCATGGTGATGGTCTTCATCTTGTGTAGCGTGCCCTATGCCACCCTGGTCGTCTACCAGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000558041.5
ENST00000561100.2
CDS TCA 90 bp GTATGCTGGGTTCCAGGCTGGCCTCAGCCATGCCACTCCCTGTACTaGCCACATTACGGCGACTGTACCGGTGGTGTAGTTGCACCAGGG +
Preference number: 5 (lower is better)
Translates to: VCWVPGWPQPCHSLY*PHYGDCTGGVVAPG
Trigger: CCCTGGTGCAACTACACCACCGGTACAGTCGCCGTAATGTGGTCAGTACAGGGAGTGGCATGGCTGAGGCCAGCCTGGAACCCAGCATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS GCA 90 bp GGAGGCATAGGGAATAGAGATGGTGTTCTGTGGGGTCCGGAGCGCTaGTATGATGACCTTCTTCTTCTGGCTGGCACTCAGGGCCCGTCG +
Preference number: 5 (lower is better)
Translates to: GGIGNRDGVLWGPER*YDDLLLLAGTQGPS
Trigger: CGACGGGCCCTGAGTGCCAGCCAGAAGAAGAAGGTCATCATAGCAGCGCTCCGGACCCCACAGAACACCATCTCTATTCCCTATGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000558041.5
ENST00000560729.1
ENST00000561100.2
CDS CCA 90 bp GGCTTAAAGATCTGCTGCTGCCCAATGTGGAACATCTCCAGGAGCTaGCTACCCGAGCGTATGCTGGGTTCCAGGCTGGCCTCAGCCATG +
Preference number: 5 (lower is better)
Translates to: GLKICCCPMWNISRS*LPERMLGSRLASAM
Trigger: CATGGCTGAGGCCAGCCTGGAACCCAGCATACGCTCGGGTAGCCAGCTCCTGGAGATGTTCCACATTGGGCAGCAGCAGATCTTTAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS GCA 90 bp CTGCAGGGAATACTTATCAGGGAATGTTTCAGGTTCCACAGGGGCTaGCGGTGCCACCTGGGATACAGAGTCCACTGTGCTCAGGGGTGG +
Preference number: 5 (lower is better)
Translates to: LQGILIRECFRFHRG*RCHLGYRVHCAQGW
Trigger: CCACCCCTGAGCACAGTGGACTCTGTATCCCAGGTGGCACCGGCAGCCCCTGTGGAACCTGAAACATTCCCTGATAAGTATTCCCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS CCA 90 bp TCCAGACTTCCGTGCAGGTGGACGTGGCATAGATGTCAGCCACATTaGTTACTGCAAACACAGGGACACTGGCCACCACTGCATGGGCCC +
Preference number: 5 (lower is better)
Translates to: SRLPCRWTWHRCQPH*LLQTQGHWPPLHGP
Trigger: GGGCCCATGCAGTGGTGGCCAGTGTCCCTGTGTTTGCAGTAACCAATGTGGCTGACATCTATGCCACGTCCACCTGCACGGAAGTCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000558041.5
ENST00000560729.1
ENST00000561100.2
CDS-3UTR CAA 90 bp TCACATGGCCACAGCATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGAGGTGGCCCAAGGAGTaGCTCCAGACTTCCGTGCAG +
Preference number: 5 (lower is better)
Translates to: SHGHSIPTLWWEYGSSPLRWPKE*LQTSVQ
Trigger: CTGCACGGAAGTCTGGAGCAACTCCTTGGGCCACCT...CAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp ACATGGCCACAGCATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTAGGTGGCCCAAGGAGTaGCTCCAGACTTCCGTGCAG +
Preference number: 5 (lower is better)
Translates to: TWPQHSHTLVGIWKLPVARWPKE*LQTSVQ
Trigger: CTGCACGGAAGTCTGGAGCAACTCCTTGGGCCACCT...AGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS TCA 90 bp GGGGGAAGCAGCCGCTTCTTGCTGTTTCGGGTCTCTGAGAGCCACTaGGGAGGCAACTCAAAAGGCCCAAAGCCAAACTGCAGGGAATAC +
Preference number: 5 (lower is better)
Translates to: GGSSRFLLFRVSESH*GGNSKGPKPNCREY
Trigger: GTATTCCCTGCAGTTTGGCTTTGGGCCTTTTGAGTTGCCTCCTCAGTGGCTCTCAGAGACCCGAAACAGCAAGAAGCGGCTGCTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS CCA 90 bp CCAGGTGGCCCAAGGAGTTGCTCCAGACTTCCGTGCAGGTGGACGTaGCATAGATGTCAGCCACATTGGTTACTGCAAACACAGGGACAC +
Preference number: 5 (lower is better)
Translates to: PGGPRSCSRLPCRWT*HRCQPHWLLQTQGH
Trigger: GTGTCCCTGTGTTTGCAGTAACCAATGTGGCTGACATCTATGCCACGTCCACCTGCACGGAAGTCTGGAGCAACTCCTTGGGCCACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000558041.5
ENST00000560729.1
ENST00000561100.2
CDS CCA 90 bp GGCACAATGACCGTGGTGATGTTATACACCAGAACGTACACCAGGTaGCCCAAGGAGTTGCTCCAGACTTCCGTGCAGGTGGACGTGGCA +
Preference number: 5 (lower is better)
Translates to: GTMTVVMLYTRTYTR*PKELLQTSVQVDVA
Trigger: TGCCACGTCCACCTGCACGGAAGTCTGGAGCAACTCCTTGGGCCACCTGGTGTACGTTCTGGTGTATAACATCACCACGGTCATTGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000558041.5
ENST00000560729.1
ENST00000561100.2
CDS CCA 90 bp GCCATGCCACTCCCTGTACTGACCACATTACGGCGACTGTACCGGTaGTGTAGTTGCACCAGGGTCCCTATCAAGCACTTGCGGACAGAT +
Preference number: 5 (lower is better)
Translates to: AMPLPVLTTLRRLYR*CSCTRVPIKHLRTD
Trigger: ATCTGTCCGCAAGTGCTTGATAGGGACCCTGGTGCAACTACACCACCGGTACAGTCGCCGTAATGTGGTCAGTACAGGGAGTGGCATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS CCA 90 bp GGCCCCTGCTCTCCCTCCAGGCAGGTGCTAAATATCTCCTTGGCCTaGAAGTCAGCTGAGCCAATGTACTTGGCCTCACTCTCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: GPCSPSRQVLNISLA*KSAEPMYLASLSSS
Trigger: TGAGGAAGAGAGTGAGGCCAAGTACATTGGCTCAGCTGACTTCCAGGCCAAGGAGATATTTAGCACCTGCCTGGAGGGAGAGCAGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS GCA 90 bp GTCAGCCACATTGGTTACTGCAAACACAGGGACACTGGCCACCACTaGATGGGCCCAGATGTACATCACCAGTTCACGGGACTTGGCATC +
Preference number: 5 (lower is better)
Translates to: VSHIGYCKHRDTGHH*MGPDVHHQFTGLGI
Trigger: GATGCCAAGTCCCGTGAACTGGTGATGTACATCTGGGCCCATGCAGTGGTGGCCAGTGTCCCTGTGTTTGCAGTAACCAATGTGGCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000558041.5
ENST00000560729.1
ENST00000561100.2
CDS GCA 90 bp TTCCGTGCAGGTGGACGTGGCATAGATGTCAGCCACATTGGTTACTaGAAACACAGGGACACTGGCCACCACTGCATGGGCCCAGATGTA +
Preference number: 5 (lower is better)
Translates to: FRAGGRGIDVSHIGY*KHRDTGHHCMGPDV
Trigger: TACATCTGGGCCCATGCAGTGGTGGCCAGTGTCCCTGTGTTTGCAGTAACCAATGTGGCTGACATCTATGCCACGTCCACCTGCACGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000558041.5
ENST00000560729.1
ENST00000561100.2
CDS GCA 90 bp CCAGAACGTACACCAGGTGGCCCAAGGAGTTGCTCCAGACTTCCGTaGAGGTGGACGTGGCATAGATGTCAGCCACATTGGTTACTGCAA +
Preference number: 5 (lower is better)
Translates to: PERTPGGPRSCSRLP*RWTWHRCQPHWLLQ
Trigger: TTGCAGTAACCAATGTGGCTGACATCTATGCCACGTCCACCTGCACGGAAGTCTGGAGCAACTCCTTGGGCCACCTGGTGTACGTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000558041.5
ENST00000560729.1
ENST00000561100.2
CDS GCA 90 bp GCCTCACTCTCTTCCTCATCCTCTGTGGGCTTAAAGATCTGCTGCTaGCCAATGTGGAACATCTCCAGGAGCTGGCTACCCGAGCGTATG +
Preference number: 5 (lower is better)
Translates to: ASLSSSSSVGLKICC*PMWNISRSWLPERM
Trigger: CATACGCTCGGGTAGCCAGCTCCTGGAGATGTTCCACATTGGGCAGCAGCAGATCTTTAAGCCCACAGAGGATGAGGAAGAGAGTGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS GCA 90 bp TTGGCCTCACTCTCTTCCTCATCCTCTGTGGGCTTAAAGATCTGCTaGTGCCCAATGTGGAACATCTCCAGGAGCTGGCTACCCGAGCGT +
Preference number: 5 (lower is better)
Translates to: LASLSSSSSVGLKIC*CPMWNISRSWLPER
Trigger: ACGCTCGGGTAGCCAGCTCCTGGAGATGTTCCACATTGGGCAGCAGCAGATCTTTAAGCCCACAGAGGATGAGGAAGAGAGTGAGGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS CCA 90 bp CGTACACCAGGTGGCCCAAGGAGTTGCTCCAGACTTCCGTGCAGGTaGACGTGGCATAGATGTCAGCCACATTGGTTACTGCAAACACAG +
Preference number: 5 (lower is better)
Translates to: RTPGGPRSCSRLPCR*TWHRCQPHWLLQTQ
Trigger: CTGTGTTTGCAGTAACCAATGTGGCTGACATCTATGCCACGTCCACCTGCACGGAAGTCTGGAGCAACTCCTTGGGCCACCTGGTGTACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000558041.5
ENST00000560729.1
ENST00000561100.2
CDS CCA 90 bp TCTTCCTCATCCTCTGTGGGCTTAAAGATCTGCTGCTGCCCAATGTaGAACATCTCCAGGAGCTGGCTACCCGAGCGTATGCTGGGTTCC +
Preference number: 5 (lower is better)
Translates to: SSSSSVGLKICCCPM*NISRSWLPERMLGS
Trigger: GGAACCCAGCATACGCTCGGGTAGCCAGCTCCTGGAGATGTTCCACATTGGGCAGCAGCAGATCTTTAAGCCCACAGAGGATGAGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp GGTATCAGGAGAAACAGTGAGTCATATGACTGGGGCTTCCAGAGAAACAGTGTATCGGCGCCGGACGCGTaGTGCGGCTCGCTGGCATTT +
Preference number: 5 (lower is better)
Translates to: GIRRNSESYDWGFQRNSVSAPDA*CGSLAF
Trigger: AAATGCCAGCGAGCCGCACAACGCGTCCGGCGCCGA...TACACTGTTTCTCTGGAAGCCCCAGTCATATGACTCACTGTTTCTCCTGATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CAA 90 bp ACAGCATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAAGCCAGCAGGGAGACTTaGGGCAGCCAAACAGCAGTG +
Preference number: 5 (lower is better)
Translates to: TAFPHSGGNMEAPRCFQEASRET*GSQTAV
Trigger: CACTGCTGTTTGGCTGCCCAAAGTCTCCCTGCTGGC...TTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS GCA 90 bp TACTTGGCCTCACTCTCTTCCTCATCCTCTGTGGGCTTAAAGATCTaGTGCTGCCCAATGTGGAACATCTCCAGGAGCTGGCTACCCGAG +
Preference number: 5 (lower is better)
Translates to: YLASLSSSSSVGLKI*CCPMWNISRSWLPE
Trigger: CTCGGGTAGCCAGCTCCTGGAGATGTTCCACATTGGGCAGCAGCAGATCTTTAAGCCCACAGAGGATGAGGAAGAGAGTGAGGCCAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS CCA 90 bp GCCACATTGGTTACTGCAAACACAGGGACACTGGCCACCACTGCATaGGCCCAGATGTACATCACCAGTTCACGGGACTTGGCATCAGAT +
Preference number: 5 (lower is better)
Translates to: ATLVTANTGTLATTA*AQMYITSSRDLASD
Trigger: ATCTGATGCCAAGTCCCGTGAACTGGTGATGTACATCTGGGCCCATGCAGTGGTGGCCAGTGTCCCTGTGTTTGCAGTAACCAATGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000558041.5
ENST00000560729.1
ENST00000561100.2
CDS CCA 90 bp TGGCATAGATGTCAGCCACATTGGTTACTGCAAACACAGGGACACTaGCCACCACTGCATGGGCCCAGATGTACATCACCAGTTCACGGG +
Preference number: 5 (lower is better)
Translates to: WHRCQPHWLLQTQGH*PPLHGPRCTSPVHG
Trigger: CCCGTGAACTGGTGATGTACATCTGGGCCCATGCAGTGGTGGCCAGTGTCCCTGTGTTTGCAGTAACCAATGTGGCTGACATCTATGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000558041.5
ENST00000560729.1
ENST00000561100.2
CDS-3UTR CAA 90 bp CATGGCCACAGCATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTGAAAGAGAACAGGGTTaGCCAGCAGGGAGACTTTGG +
Preference number: 5 (lower is better)
Translates to: HGHSIPTLWWEYGSSPLLEREQG*PAGRLW
Trigger: CCAAAGTCTCCCTGCTGGCAAACCCTGTTCTCTTTC...AAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp CATGGCCACAGCATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTGCTGAGCCAATGTACTaGGCCTCACTCTCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: HGHSIPTLWWEYGSSPLLAEPMY*ASLSSS
Trigger: TGAGGAAGAGAGTGAGGCCAAGTACATTGGCTCAGC...AAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS GCA 90 bp CTCCCTGTACTGACCACATTACGGCGACTGTACCGGTGGTGTAGTTaGACCAGGGTCCCTATCAAGCACTTGCGGACAGATTTGTTCACA +
Preference number: 5 (lower is better)
Translates to: LPVLTTLRRLYRWCS*TRVPIKHLRTDLFT
Trigger: TGTGAACAAATCTGTCCGCAAGTGCTTGATAGGGACCCTGGTGCAACTACACCACCGGTACAGTCGCCGTAATGTGGTCAGTACAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS CCA 90 bp TCACTTTATTGTTTCTGCTCATCTTCCGCTCCACCCTGCCTACCTTaGGCACCTTTGTCTGGATCAGCTCTTCTGGGGTGTTGCCCAAGG +
Preference number: 5 (lower is better)
Translates to: SLYCFCSSSAPPCLP*APLSGSALLGCCPR
Trigger: CCTTGGGCAACACCCCAGAAGAGCTGATCCAGACAAAGGTGCCCAAGGTAGGCAGGGTGGAGCGGAAGATGAGCAGAAACAATAAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp TCAACTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCGCGGCTCGCTGGCATTaGGAGAGATCCAGCTCCCGT +
Preference number: 5 (lower is better)
Translates to: STHTELQGDHTITWPQHSAARWH*ERSSSR
Trigger: ACGGGAGCTGGATCTCTCCAAATGCCAGCGAGCCGC...GGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CAA 90 bp ACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCAGGTGGCCCAAGGAGTaGCTCCAGACTTCCGTGCAG +
Preference number: 5 (lower is better)
Translates to: TLSCKEIIQSHGHSIPTLRWPKE*LQTSVQ
Trigger: CTGCACGGAAGTCTGGAGCAACTCCTTGGGCCACCT...GAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp AGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGGAATATGGCCAGCAGGGAGACTTaGGGCAGCCAAACAGCAGTG +
Preference number: 5 (lower is better)
Translates to: RRSYNHMATAFPHSGGNMASRET*GSQTAV
Trigger: CACTGCTGTTTGGCTGCCCAAAGTCTCCCTGCTGGC...CATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp AGAGCCGCAGGAGGCTGTGGCAGCCCCGTTTCTGCTGTGAGCAAACAGTGCTATCCAAAGTGGCTACACTaGACAGATTCTCCTAAAGTG +
Preference number: 5 (lower is better)
Translates to: RAAGGCGSPVSAVSKQCYPKWLH*TDSPKV
Trigger: CACTTTAGGAGAATCTGTCAAGTGTAGCCACTTTGG...ATAGCACTGTTTGCTCACAGCAGAAACGGGGCTGCCACAGCCTCCTGCGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CAA 90 bp CCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACATTCGGCGCCGGACGCGTaGTGCGGCTCGCTGGCATTT +
Preference number: 5 (lower is better)
Translates to: PYWRNQLTLSCKEIIQSHSAPDA*CGSLAF
Trigger: AAATGCCAGCGAGCCGCACAACGCGTCCGGCGCCGA...ATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CAA 90 bp AGAGCCGCAGGAGGCTGTGGCAGCCCCGTTTCTGCTGTGAGCAAACAGTGCTATACTTTGTGCAAAAATTaGACGACCTTGCAGAAGAGC +
Preference number: 5 (lower is better)
Translates to: RAAGGCGSPVSAVSKQCYTLCKN*TTLQKS
Trigger: GCTCTTCTGCAAGGTCGTCAAATTTTTGCACAAAGT...ATAGCACTGTTTGCTCACAGCAGAAACGGGGCTGCCACAGCCTCCTGCGGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CAA 90 bp TCAACTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCGCCAGCAGGGAGACTTaGGGCAGCCAAACAGCAGTG +
Preference number: 5 (lower is better)
Translates to: STHTELQGDHTITWPQHSASRET*GSQTAV
Trigger: CACTGCTGTTTGGCTGCCCAAAGTCTCCCTGCTGGC...GGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp CTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACAGGAAGCAGCCGCTTCTaGCTGTTTCGGGTCTCTGAG +
Preference number: 5 (lower is better)
Translates to: LTLSCKEIIQSHGHSIPTGSSRF*LFRVSE
Trigger: CTCAGAGACCCGAAACAGCAAGAAGCGGCTGCTTCC...TGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp AGAGCCGCAGGAGGCTGTGGCAGCCCCGTTTCTGCTGTGAGCAAACAGTGCTATTATGGAAGCTCCCCGTaGCTTCCAAGAATTTACAAT +
Preference number: 5 (lower is better)
Translates to: RAAGGCGSPVSAVSKQCYYGSSP*LPRIYN
Trigger: ATTGTAAATTCTTGGAAGCAACGGGGAGCTTCCATA...ATAGCACTGTTTGCTCACAGCAGAAACGGGGCTGCCACAGCCTCCTGCGGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CAA 90 bp ACAGCATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAACAGAGGGGTCCCAAATaGCTTGTGAGGCTGATGAGT +
Preference number: 5 (lower is better)
Translates to: TAFPHSGGNMEAPRCFQEQRGPK*LVRLMS
Trigger: ACTCATCAGCCTCACAAGCAATTTGGGACCCCTCTG...TTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS GCA 90 bp GCACTTGCGGACAGATTTGTTCACAGTAAGAAAGAGAACAGGGTTTaGCAGCAGGGAGACTTTGGGCAGCCAAACAGCAGTGAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: ALADRFVHSKKENRV*QQGDFGQPNSSEQQ
Trigger: TTGCTGCTCACTGCTGTTTGGCTGCCCAAAGTCTCCCTGCTGGCAAACCCTGTTCTCTTTCTTACTGTGAACAAATCTGTCCGCAAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000558041.5
ENST00000561100.2
CDS GCA 90 bp AAGCAGTTGAACTCCAGAGCCTGGGATGTGATCACTACGTCACACTaGCTTCTCATGAAGAGACAACACCTCACAACGCAACCCCCAACA +
Preference number: 5 (lower is better)
Translates to: KQLNSRAWDVITTSH*LLMKRQHLTTQPPT
Trigger: TGTTGGGGGTTGCGTTGTGAGGTGTTGTCTCTTCATGAGAAGGCAGTGTGACGTAGTGATCACATCCCAGGCTCTGGAGTTCAACTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543580.7
CDS CCA 90 bp GCAGTGGAGCTGGCATTCAGACAGAAGCAGTTGAACTCCAGAGCCTaGGATGTGATCACTACGTCACACTGCCTTCTCATGAAGAGACAA +
Preference number: 5 (lower is better)
Translates to: AVELAFRQKQLNSRA*DVITTSHCLLMKRQ
Trigger: TTGTCTCTTCATGAGAAGGCAGTGTGACGTAGTGATCACATCCCAGGCTCTGGAGTTCAACTGCTTCTGTCTGAATGCCAGCTCCACTGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543580.7
CDS-3UTR CAA 90 bp CACAGCATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAGTCCCTATCAAGCACTaGCGGACAGATTTGTTCACA +
Preference number: 5 (lower is better)
Translates to: HSIPTLWWEYGSSPLLPRVPIKH*RTDLFT
Trigger: TGTGAACAAATCTGTCCGCAAGTGCTTGATAGGGAC...TCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp ACAGCATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAAGTGCTAAATATCTCCTaGGCCTGGAAGTCAGCTGAG +
Preference number: 5 (lower is better)
Translates to: TAFPHSGGNMEAPRCFQEVLNIS*AWKSAE
Trigger: CTCAGCTGACTTCCAGGCCAAGGAGATATTTAGCAC...TTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp AGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGCTACCTTGGGCACCTTaGTCTGGATCAGCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: SCKEIIQSHGHSIPTLWWLPWAP*SGSALL
Trigger: CAGAAGAGCTGATCCAGACAAAGGTGCCCAAGGTAG...CCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp ACAGGCATTTTCTCTGGAGCCACCATGCTCCATCATGATCTTGGAATTCCCTTATCCACCCTGCCTACCTaGGGCACCTTTGTCTGGATC +
Preference number: 5 (lower is better)
Translates to: TGIFSGATMLHHDLGIPLSTLPT*GTFVWI
Trigger: GATCCAGACAAAGGTGCCCAAGGTAGGCAGGGTGGA...TAAGGGAATTCCAAGATCATGATGGAGCATGGTGGCTCCAGAGAAAATGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CAA 90 bp GGTATCAGGAGAAACAGTGAGTCATATGACTGGGGCTTCCAGAGAAACAGTGTATGTGAGGCTGATGAGTaGAGGACACTGCCCTCCCTC +
Preference number: 5 (lower is better)
Translates to: GIRRNSESYDWGFQRNSVCEADE*RTLPSL
Trigger: GAGGGAGGGCAGTGTCCTCAACTCATCAGCCTCACA...TACACTGTTTCTCTGGAAGCCCCAGTCATATGACTCACTGTTTCTCCTGATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CAA 90 bp ACTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACGAGCTGGCGCTTGGTTaGTCCTCACTAACAGGGAAG +
Preference number: 5 (lower is better)
Translates to: THTELQGDHTITWPQHSHELALG*SSLTGK
Trigger: CTTCCCTGTTAGTGAGGACAAACCAAGCGCCAGCTC...GTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CAA 90 bp TCGGAAGGAAACCATCTTTGTCAGATTCTTGCCAACCTTTTGGGCAGAGTCACCGAGCTGGCGCTTGGTTaGTCCTCACTAACAGGGAAG +
Preference number: 5 (lower is better)
Translates to: SEGNHLCQILANLLGRVTELALG*SSLTGK
Trigger: CTTCCCTGTTAGTGAGGACAAACCAAGCGCCAGCTC...GGTGACTCTGCCCAAAAGGTTGGCAAGAATCTGACAAAGATGGTTTCCTTCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CAA 90 bp ACAGCATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAACTGTTGGTGACAGATTaGAACACGGTTGTGCGGCAA +
Preference number: 5 (lower is better)
Translates to: TAFPHSGGNMEAPRCFQELLVTD*NTVVRQ
Trigger: TTGCCGCACAACCGTGTTCAAATCTGTCACCAACAG...TTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543580.7
ENST00000561100.2
CDS GCA 90 bp GAAAAATGCTCACTTTATTGTTTCTGCTCATCTTCCGCTCCACCCTaGCTACCTTGGGCACCTTTGTCTGGATCAGCTCTTCTGGGGTGT +
Preference number: 5 (lower is better)
Translates to: EKCSLYCFCSSSAPP*LPWAPLSGSALLGC
Trigger: ACACCCCAGAAGAGCTGATCCAGACAAAGGTGCCCAAGGTAGGCAGGGTGGAGCGGAAGATGAGCAGAAACAATAAAGTGAGCATTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp ACAGCATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAAACCAGTTCACGGGACTaGGCATCAGATATTTTCCTC +
Preference number: 5 (lower is better)
Translates to: TAFPHSGGNMEAPRCFQETSSRD*ASDIFL
Trigger: GAGGAAAATATCTGATGCCAAGTCCCGTGAACTGGT...TTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp CAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGGAATAGAAAGAGAACAGGGTTaGCCAGCAGGGAGACTTTGG +
Preference number: 5 (lower is better)
Translates to: QGDHTITWPQHSHTLVGIEREQG*PAGRLW
Trigger: CCAAAGTCTCCCTGCTGGCAAACCCTGTTCTCTTTC...TATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp GGAGTCTTCCTCGGAAGGAAACCATCTTTGTCAGATTCTTGCCAACCTTTTGGGGCTGAGCCAATGTACTaGGCCTCACTCTCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: GVFLGRKPSLSDSCQPFGAEPMY*ASLSSS
Trigger: TGAGGAAGAGAGTGAGGCCAAGTACATTGGCTCAGC...CCCAAAAGGTTGGCAAGAATCTGACAAAGATGGTTTCCTTCCGAGGAAGACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CAA 90 bp CAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGGAATACTACCTTGGGCACCTTaGTCTGGATCAGCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: QGDHTITWPQHSHTLVGILPWAP*SGSALL
Trigger: CAGAAGAGCTGATCCAGACAAAGGTGCCCAAGGTAG...TATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp AGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGCATCTGGGTCAGATGTaGCCTTGGCACTCTACAATG +
Preference number: 5 (lower is better)
Translates to: SCKEIIQSHGHSIPTLWWHLGQM*PWHSTM
Trigger: CATTGTAGAGTGCCAAGGCAACATCTGACCCAGATG...CCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CAA 90 bp GGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCATGTGAGGCTGATGAGTaGAGGACACTGCCCTCCCTC +
Preference number: 5 (lower is better)
Translates to: GPYWRNQLTLSCKEIIQSCEADE*RTLPSL
Trigger: GAGGGAGGGCAGTGTCCTCAACTCATCAGCCTCACA...TGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CAA 90 bp AGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGGAATATGGAACGCTGGAAAAGCCACTaGGACTCGGGCATCAGAATG +
Preference number: 5 (lower is better)
Translates to: RSYNHMATAFPHSGGNMERWKSH*DSGIRM
Trigger: CATTCTGATGCCCGAGTCCAAGTGGCTTTTCCAGCG...TTCCATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543580.7
CDS-3UTR CAA 90 bp AGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGTTCAGACAGAAGCAGTaGAACTCCAGAGCCTGGGAT +
Preference number: 5 (lower is better)
Translates to: SCKEIIQSHGHSIPTLWWFRQKQ*NSRAWD
Trigger: ATCCCAGGCTCTGGAGTTCAACTGCTTCTGTCTGAA...CCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543580.7
CDS GCA 90 bp GCCACAGCATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTaGTTCCAAGAATTTACAATCCTTGCTAGGAATCCACCTTTGGAA +
Preference number: 5 (lower is better)
Translates to: ATAFPHSGGNMEAPR*FQEFTILARNPPLE
Trigger: TTCCAAAGGTGGATTCCTAGCAAGGATTGTAAATTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS CCA 90 bp ATGAAACGTAAGTTCCATTCTCAATTAATATGGTGCTGGGCGCCTTaGAATGCCCACTCACTGGCTCCATTTGGGAAGGTGGTACCAGGT +
Preference number: 5 (lower is better)
Translates to: MKRKFHSQLIWCWAP*NAHSLAPFGKVVPG
Trigger: ACCTGGTACCACCTTCCCAAATGGAGCCAGTGAGTGGGCATTCCAAGGCGCCCAGCACCATATTAATTGAGAATGGAACTTACGTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558041.5
ENST00000560729.1
CDS-3UTR CAA 90 bp TTCCAGAGAAACAGTGTAAGACACCAAATCCCTACCTTCTCAACAGAAAATGTTGCGGCTCGCTGGCATTaGGAGAGATCCAGCTCCCGT +
Preference number: 5 (lower is better)
Translates to: FQRNSVRHQIPTFSTENVAARWH*ERSSSR
Trigger: ACGGGAGCTGGATCTCTCCAAATGCCAGCGAGCCGC...AACATTTTCTGTTGAGAAGGTAGGGATTTGGTGTCTTACACTGTTTCTCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CAA 90 bp CCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACATCCACCCTGCCTACCTaGGGCACCTTTGTCTGGATC +
Preference number: 5 (lower is better)
Translates to: PILEESTHTELQGDHTITSTLPT*GTFVWI
Trigger: GATCCAGACAAAGGTGCCCAAGGTAGGCAGGGTGGA...TGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp ATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAATTTACCATCTGGGTCAGATGTaGCCTTGGCACTCTACAATG +
Preference number: 5 (lower is better)
Translates to: IPTLWWEYGSSPLLPRIYHLGQM*PWHSTM
Trigger: CATTGTAGAGTGCCAAGGCAACATCTGACCCAGATG...GTAAATTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CAA 90 bp ACTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACCCAGGGGTAGGGTCTTaGGGTTCACATTCAGAAACA +
Preference number: 5 (lower is better)
Translates to: THTELQGDHTITWPQHSHPGVGS*GSHSET
Trigger: TGTTTCTGAATGTGAACCCAAAGACCCTACCCCTGG...GTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CAA 90 bp ATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAATTTACCCAGGGGTAGGGTCTTaGGGTTCACATTCAGAAACA +
Preference number: 5 (lower is better)
Translates to: IPTLWWEYGSSPLLPRIYPGVGS*GSHSET
Trigger: TGTTTCTGAATGTGAACCCAAAGACCCTACCCCTGG...GTAAATTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS GCA 90 bp CTTGCTAGGAATCCACCTTTGGAAAAATGCTCACTTTATTGTTTCTaGTCATCTTCCGCTCCACCCTGCCTACCTTGGGCACCTTTGTCT +
Preference number: 5 (lower is better)
Translates to: LARNPPLEKCSLYCF*SSSAPPCLPWAPLS
Trigger: AGACAAAGGTGCCCAAGGTAGGCAGGGTGGAGCGGAAGATGAGCAGAAACAATAAAGTGAGCATTTTTCCAAAGGTGGATTCCTAGCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS CCA 90 bp CATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGGAATATaGAAGCTCCCCGTTGCTTCCAAGAATTTACAATCCTTGCTAGGA +
Preference number: 5 (lower is better)
Translates to: HTITWPQHSHTLVGI*KLPVASKNLQSLLG
Trigger: TCCTAGCAAGGATTGTAAATTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp GGAGTCTTCCTCGGAAGGAAACCATCTTTGTCAGATTCTTGCCAACCTTTTGGGACCAGTTCACGGGACTaGGCATCAGATATTTTCCTC +
Preference number: 5 (lower is better)
Translates to: GVFLGRKPSLSDSCQPFGTSSRD*ASDIFL
Trigger: GAGGAAAATATCTGATGCCAAGTCCCGTGAACTGGT...CCCAAAAGGTTGGCAAGAATCTGACAAAGATGGTTTCCTTCCGAGGAAGACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CAA 90 bp CCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACATGGAAGCAGCCGCTTCTaGCTGTTTCGGGTCTCTGAG +
Preference number: 5 (lower is better)
Translates to: PYWRNQLTLSCKEIIQSHGSSRF*LFRVSE
Trigger: CTCAGAGACCCGAAACAGCAAGAAGCGGCTGCTTCC...ATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp CATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGCTACCTTGGGCACCTTaGTCTGGATCAGCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: HSKASGPYWRNQLTLSCKLPWAP*SGSALL
Trigger: CAGAAGAGCTGATCCAGACAAAGGTGCCCAAGGTAG...CTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS CCA 90 bp TACCTGAAAATGAAACGTAAGTTCCATTCTCAATTAATATGGTGCTaGGCGCCTTGGAATGCCCACTCACTGGCTCCATTTGGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: YLKMKRKFHSQLIWC*APWNAHSLAPFGKV
Trigger: CACCTTCCCAAATGGAGCCAGTGAGTGGGCATTCCAAGGCGCCCAGCACCATATTAATTGAGAATGGAACTTACGTTTCATTTTCAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558041.5
CDS CCA 90 bp TTCCTGAAAATGAAACGTAAGTTCCATTCTCAATTAATATGGTGCTaGGCGCCTTGGAATGCCCACTCACTGGCTCCATTTGGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: FLKMKRKFHSQLIWC*APWNAHSLAPFGKV
Trigger: CACCTTCCCAAATGGAGCCAGTGAGTGGGCATTCCAAGGCGCCCAGCACCATATTAATTGAGAATGGAACTTACGTTTCATTTTCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560729.1
CDS-3UTR CAA 90 bp AATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTGAAAGAGAACAGGGTTaGCCAGCAGGGAGACTTTGG +
Preference number: 5 (lower is better)
Translates to: NQLTLSCKEIIQSHGHSIEREQG*PAGRLW
Trigger: CCAAAGTCTCCCTGCTGGCAAACCCTGTTCTCTTTC...AATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp AGAGCTCATCTGGGTCAGATGTTGCCTTGGCACTCTACAATGATTATTTCTCCCGTCCCTATCAAGCACTaGCGGACAGATTTGTTCACA +
Preference number: 5 (lower is better)
Translates to: RAHLGQMLPWHSTMIISPVPIKH*RTDLFT
Trigger: TGTGAACAAATCTGTCCGCAAGTGCTTGATAGGGAC...GGGAGAAATAATCATTGTAGAGTGCCAAGGCAACATCTGACCCAGATGAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CAA 90 bp CACTGGATTTTATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGGGAAGCAGCCGCTTCTaGCTGTTTCGGGTCTCTGAG +
Preference number: 5 (lower is better)
Translates to: HWILCRFPYHSKASGPYWGSSRF*LFRVSE
Trigger: CTCAGAGACCCGAAACAGCAAGAAGCGGCTGCTTCC...CCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATAAAATCCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp CACTGGATTTTATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGTCCACCCTGCCTACCTaGGGCACCTTTGTCTGGATC +
Preference number: 5 (lower is better)
Translates to: HWILCRFPYHSKASGPYWSTLPT*GTFVWI
Trigger: GATCCAGACAAAGGTGCCCAAGGTAGGCAGGGTGGA...CCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATAAAATCCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp ACAGCATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAAGCTAGGAATCCACCTTaGGAAAAATGCTCACTTTAT +
Preference number: 5 (lower is better)
Translates to: TAFPHSGGNMEAPRCFQEARNPP*EKCSLY
Trigger: ATAAAGTGAGCATTTTTCCAAAGGTGGATTCCTAGC...TTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAATGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp AGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGGAATATGGAAAGCATCTGGCCCATATaGGAGGAATCAACTCACACT +
Preference number: 5 (lower is better)
Translates to: RSYNHMATAFPHSGGNMESIWPI*EESTHT
Trigger: AGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCT...TTCCATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp AGAGCTCATCTGGGTCAGATGTTGCCTTGGCACTCTACAATGATTATTTCTCCCAGCATCTGGCCCATATaGGAGGAATCAACTCACACT +
Preference number: 5 (lower is better)
Translates to: RAHLGQMLPWHSTMIISPSIWPI*EESTHT
Trigger: AGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCT...GGGAGAAATAATCATTGTAGAGTGCCAAGGCAACATCTGACCCAGATGAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CAA 90 bp ACAGGCATTTTCTCTGGAGCCACCATGCTCCATCATGATCTTGGAATTCCCTTAAAAACTGCCCAGCTCTaGTCCCCACAGAGAATAATG +
Preference number: 5 (lower is better)
Translates to: TGIFSGATMLHHDLGIPLKTAQL*SPQRIM
Trigger: CATTATTCTCTGTGGGGACAAGAGCTGGGCAGTTTT...TAAGGGAATTCCAAGATCATGATGGAGCATGGTGGCTCCAGAGAAAATGCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CAA 90 bp AGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCTATCTCTCTGAGGCGTaGGTGATGCCAAGGGAAAAT +
Preference number: 5 (lower is better)
Translates to: RNQLTLSCKEIIQSHGHSYLSEA*VMPREN
Trigger: ATTTTCCCTTGGCATCACCAACGCCTCAGAGAGATA...GCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CAA 90 bp ACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGATCTTTGTCAGATTCTaGCCAACCTTTTGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: TELQGDHTITWPQHSHTLIFVRF*PTFWAE
Trigger: CTCTGCCCAAAAGGTTGGCAAGAATCTGACAAAGAT...CAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CAA 90 bp GTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGGATGATTGTGAAAGCTTaGAAAGACAAGCTTGAAGGG +
Preference number: 5 (lower is better)
Translates to: VARRSYNHMATAFPHSGGMIVKA*KDKLEG
Trigger: CCCTTCAAGCTTGTCTTTCAAAGCTTTCACAATCAT...CCCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS GCA 90 bp AGTTTCCTGAAAATGAAACGTAAGTTCCATTCTCAATTAATATGGTaGTGGGCGCCTTGGAATGCCCACTCACTGGCTCCATTTGGGAAG +
Preference number: 5 (lower is better)
Translates to: SFLKMKRKFHSQLIW*WAPWNAHSLAPFGK
Trigger: CTTCCCAAATGGAGCCAGTGAGTGGGCATTCCAAGGCGCCCAGCACCATATTAATTGAGAATGGAACTTACGTTTCATTTTCAGGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560729.1
CDS-3UTR CAA 90 bp CTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGACAGAGCAGAATACTTaGTGCAAAAATTTGACGACC +
Preference number: 5 (lower is better)
Translates to: LSCKEIIQSHGHSIPTLWTEQNT*CKNLTT
Trigger: GGTCGTCAAATTTTTGCACAAAGTATTCTGCTCTGT...CCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp CATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGACCAGTTCACGGGACTaGGCATCAGATATTTTCCTC +
Preference number: 5 (lower is better)
Translates to: HSKASGPYWRNQLTLSCKTSSRD*ASDIFL
Trigger: GAGGAAAATATCTGATGCCAAGTCCCGTGAACTGGT...CTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp TTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAATTTACACACTTGCGGACAGATTaGTTCACAGTAAGAAAGAGA +
Preference number: 5 (lower is better)
Translates to: FPHSGGNMEAPRCFQEFTHLRTD*FTVRKR
Trigger: TCTCTTTCTTACTGTGAACAAATCTGTCCGCAAGTG...TGTAAATTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp GTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCAGCTGAGCCAATGTACTaGGCCTCACTCTCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: VDFPIIQKHLAHIGGINSAEPMY*ASLSSS
Trigger: TGAGGAAGAGAGTGAGGCCAAGTACATTGGCTCAGC...TGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp TTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAATTTACATATGGAAGCTCCCCGTaGCTTCCAAGAATTTACAAT +
Preference number: 5 (lower is better)
Translates to: FPHSGGNMEAPRCFQEFTYGSSP*LPRIYN
Trigger: ATTGTAAATTCTTGGAAGCAACGGGGAGCTTCCATA...TGTAAATTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp ACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGTATGGAAGCTCCCCGTaGCTTCCAAGAATTTACAAT +
Preference number: 5 (lower is better)
Translates to: TELQGDHTITWPQHSHTLYGSSP*LPRIYN
Trigger: ATTGTAAATTCTTGGAAGCAACGGGGAGCTTCCATA...CAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp ATGTGTACCATAGGTGAGGAATCGTCATTCCTTACCTACATCCCAATGAAAGGGTATCTCTCTGAGGCGTaGGTGATGCCAAGGGAAAAT +
Preference number: 5 (lower is better)
Translates to: MCTIGEESSFLTYIPMKGYLSEA*VMPREN
Trigger: ATTTTCCCTTGGCATCACCAACGCCTCAGAGAGATA...CCCTTTCATTGGGATGTAGGTAAGGAATGACGATTCCTCACCTATGGTACACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CAA 90 bp GAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGATCTTTGTCAGATTCTaGCCAACCTTTTGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: EESTHTELQGDHTITWPQIFVRF*PTFWAE
Trigger: CTCTGCCCAAAAGGTTGGCAAGAATCTGACAAAGAT...CTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CAA 90 bp GTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACAGAGGGGTCCCAAATaGCTTGTGAGGCTGATGAGT +
Preference number: 5 (lower is better)
Translates to: VDFPIIQKHLAHIGGINSQRGPK*LVRLMS
Trigger: ACTCATCAGCCTCACAAGCAATTTGGGACCCCTCTG...TGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CAA 90 bp ATTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAATTTACACAGAGCAGAATACTTaGTGCAAAAATTTGACGACC +
Preference number: 5 (lower is better)
Translates to: IPTLWWEYGSSPLLPRIYTEQNT*CKNLTT
Trigger: GGTCGTCAAATTTTTGCACAAAGTATTCTGCTCTGT...GTAAATTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp AGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGGAATATGGAACACTTGCGGACAGATTaGTTCACAGTAAGAAAGAGA +
Preference number: 5 (lower is better)
Translates to: RSYNHMATAFPHSGGNMEHLRTD*FTVRKR
Trigger: TCTCTTTCTTACTGTGAACAAATCTGTCCGCAAGTG...TTCCATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp TATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCGTCCCTATCAAGCACTaGCGGACAGATTTGTTCACA +
Preference number: 5 (lower is better)
Translates to: YHSKASGPYWRNQLTLSCVPIKH*RTDLFT
Trigger: TGTGAACAAATCTGTCCGCAAGTGCTTGATAGGGAC...GCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp GTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCAGTGCTAAATATCTCCTaGGCCTGGAAGTCAGCTGAG +
Preference number: 5 (lower is better)
Translates to: VDFPIIQKHLAHIGGINSVLNIS*AWKSAE
Trigger: CTCAGCTGACTTCCAGGCCAAGGAGATATTTAGCAC...TGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp AGGAGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGGAATATGGCTAGGAATCCACCTTaGGAAAAATGCTCACTTTAT +
Preference number: 5 (lower is better)
Translates to: RRSYNHMATAFPHSGGNMARNPP*EKCSLY
Trigger: ATAAAGTGAGCATTTTTCCAAAGGTGGATTCCTAGC...CATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp CATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGGAAGGAAACCATCTTaGTCAGATTCTTGCCAACCT +
Preference number: 5 (lower is better)
Translates to: HSKASGPYWRNQLTLSCKGRKPS*SDSCQP
Trigger: AGGTTGGCAAGAATCTGACAAAGATGGTTTCCTTCC...CTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CAA 90 bp GGCCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACACTTGCGGACAGATTaGTTCACAGTAAGAAAGAGA +
Preference number: 5 (lower is better)
Translates to: GPYWRNQLTLSCKEIIQSHLRTD*FTVRKR
Trigger: TCTCTTTCTTACTGTGAACAAATCTGTCCGCAAGTG...TGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp TATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACGTGCTAAATATCTCCTaGGCCTGGAAGTCAGCTGAG +
Preference number: 5 (lower is better)
Translates to: YVDFPIIQKHLAHIGGINVLNIS*AWKSAE
Trigger: CTCAGCTGACTTCCAGGCCAAGGAGATATTTAGCAC...GTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp GGTATCAGGAGAAACAGTGAGTCATATGACTGGGGCTTCCAGAGAAACAGTGTAGCTAGGAATCCACCTTaGGAAAAATGCTCACTTTAT +
Preference number: 5 (lower is better)
Translates to: GIRRNSESYDWGFQRNSVARNPP*EKCSLY
Trigger: ATAAAGTGAGCATTTTTCCAAAGGTGGATTCCTAGC...TACACTGTTTCTCTGGAAGCCCCAGTCATATGACTCACTGTTTCTCCTGATACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CAA 90 bp ATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAACTCACACTAGCATCTGGCCCATATaGGAGGAATCAACTCACACT +
Preference number: 5 (lower is better)
Translates to: ISLSFKSIWPILEESTHTSIWPI*EESTHT
Trigger: AGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCT...AGTGTGAGTTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp CTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCCACATTTGACTCATACTGGTaGTTACATAGCACCTTTCAT +
Preference number: 5 (lower is better)
Translates to: LTLSCKEIIQSHGHSIPTFDSYW*LHSTFH
Trigger: ATGAAAGGTGCTATGTAACAACCAGTATGAGTCAAA...TGTGGGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CAA 90 bp CTCAGGCATCTCCCCCGTAAGCTTCTCTCTCATTTGTTGAGAAAACACAATTTAGGAAGGAAACCATCTTaGTCAGATTCTTGCCAACCT +
Preference number: 5 (lower is better)
Translates to: LRHLPRKLLSHLLRKHNLGRKPS*SDSCQP
Trigger: AGGTTGGCAAGAATCTGACAAAGATGGTTTCCTTCC...TAAATTGTGTTTTCTCAACAAATGAGAGAGAAGCTTACGGGGGAGATGCCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CAA 90 bp TCAACTCACACTGAGTTGCAAGGAGATCATACAATCACATGGCCACAGCATTCCATGATTGTGAAAGCTTaGAAAGACAAGCTTGAAGGG +
Preference number: 5 (lower is better)
Translates to: STHTELQGDHTITWPQHSMIVKA*KDKLEG
Trigger: CCCTTCAAGCTTGTCTTTCAAAGCTTTCACAATCAT...GGAATGCTGTGGCCATGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CAA 90 bp CCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACACCAAAGTGGCTACACTaGACAGATTCTCCTAAAGTG +
Preference number: 5 (lower is better)
Translates to: PILEESTHTELQGDHTITPKWLH*TDSPKV
Trigger: CACTTTAGGAGAATCTGTCAAGTGTAGCCACTTTGG...TGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CAA 90 bp AGATCATACAATCACATGGCCACAGCATTCCCACACTCTGGTGGGAATATGGAATTTGACTCATACTGGTaGTTACATAGCACCTTTCAT +
Preference number: 5 (lower is better)
Translates to: RSYNHMATAFPHSGGNMEFDSYW*LHSTFH
Trigger: ATGAAAGGTGCTATGTAACAACCAGTATGAGTCAAA...TTCCATATTCCCACCAGAGTGTGGGAATGCTGTGGCCATGTGATTGTATGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CAA 90 bp TTATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATCAATTGAGATGTGGAAGTTaGCTGGTGAGGACACCCACT +
Preference number: 5 (lower is better)
Translates to: LCRFPYHSKASGPYWRNQLRCGS*LVRTPT
Trigger: AGTGGGTGTCCTCACCAGCAAACTTCCACATCTCAA...TTGATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CAA 90 bp CCCATATTGGAGGAATCAACTCACACTGAGTTGCAAGGAGATCATACAATCACAACAGAGCAGAATACTTaGTGCAAAAATTTGACGACC +
Preference number: 5 (lower is better)
Translates to: PILEESTHTELQGDHTITTEQNT*CKNLTT
Trigger: GGTCGTCAAATTTTTGCACAAAGTATTCTGCTCTGT...TGTGATTGTATGATCTCCTTGCAACTCAGTGTGAGTTGATTCCTCCAATATGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS-3UTR CAA 90 bp ATTTTATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATTTGAGATGTGGAAGTTaGCTGGTGAGGACACCCACT +
Preference number: 5 (lower is better)
Translates to: ILCRFPYHSKASGPYWRNLRCGS*LVRTPT
Trigger: AGTGGGTGTCCTCACCAGCAAACTTCCACATCTCAA...ATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS-3UTR CAA 90 bp ATTTTATGTAGATTTCCCTATCATTCAAAAGCATCTGGCCCATATTGGAGGAATAAAACTGCCCAGCTCTaGTCCCCACAGAGAATAATG +
Preference number: 5 (lower is better)
Translates to: ILCRFPYHSKASGPYWRNKTAQL*SPQRIM
Trigger: CATTATTCTCTGTGGGGACAAGAGCTGGGCAGTTTT...ATTCCTCCAATATGGGCCAGATGCTTTTGAATGATAGGGAAATCTACATAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS GCA 72 bp GGTACAGCTGCGCCTCGCCGAACTCCCCGAGCGCGCTaGGGTTCACACCCGCAGCCTCGGCGCCGGACGCGT +
Preference number: 6 (lower is better)
Translates to: GTAAPRRTPRAR*GSHPQPRRRTR
Trigger: ACGCGTCCGGCGCCGAGGCTGCGGGTGTGAACCGCAGCGCGCTCGGGGAGTTCGGCGAGGCGCAGCTGTACC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS GCA 72 bp CGGTTCACACCCGCAGCCTCGGCGCCGGACGCGTTGTaGGGCTCGCTGGCATTTGGAGAGATCCAGCTCCCG +
Preference number: 6 (lower is better)
Translates to: RFTPAASAPDAL*GSLAFGEIQLP
Trigger: CGGGAGCTGGATCTCTCCAAATGCCAGCGAGCCGCACAACGCGTCCGGCGCCGAGGCTGCGGGTGTGAACCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS GCA 72 bp ACGACCTGCACGGTGGTGGTGAACTGGCGGTACAGCTaGGCCTCGCCGAACTCCCCGAGCGCGCTGCGGTTC +
Preference number: 6 (lower is better)
Translates to: TTCTVVVNWRYS*ASPNSPSALRF
Trigger: GAACCGCAGCGCGCTCGGGGAGTTCGGCGAGGCGCAGCTGTACCGCCAGTTCACCACCACCGTGCAGGTCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000558041.5
ENST00000561100.2
CDS CAA 90 bp CACCCGCAGCCTCGGCGCCGGACGCGTTGTGCGGCTCGCTGGCATTaGGAGAGATCCAGCTCCCGTTATGTCCCATGGCGAGGCTGGGAC +
Preference number: 6 (lower is better)
Translates to: HPQPRRRTRCAARWH*ERSSSRYVPWRGWD
Trigger: GTCCCAGCCTCGCCATGGGACATAACGGGAGCTGGATCTCTCCAAATGCCAGCGAGCCGCACAACGCGTCCGGCGCCGAGGCTGCGGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS CAA 90 bp CCGAGCGCGCTGCGGTTCACACCCGCAGCCTCGGCGCCGGACGCGTaGTGCGGCTCGCTGGCATTTGGAGAGATCCAGCTCCCGTTATGT +
Preference number: 6 (lower is better)
Translates to: PSALRFTPAASAPDA*CGSLAFGEIQLPLC
Trigger: ACATAACGGGAGCTGGATCTCTCCAAATGCCAGCGAGCCGCACAACGCGTCCGGCGCCGAGGCTGCGGGTGTGAACCGCAGCGCGCTCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS CAA 72 bp CTGCGGTTCACACCCGCAGCCTCGGCGCCGGACGCGTaGTGCGGCTCGCTGGCATTTGGAGAGATCCAGCTC +
Preference number: 6 (lower is better)
Translates to: LRFTPAASAPDA*CGSLAFGEIQL
Trigger: GAGCTGGATCTCTCCAAATGCCAGCGAGCCGCACAACGCGTCCGGCGCCGAGGCTGCGGGTGTGAACCGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS CCA 72 bp CCGCAGCCTCGGCGCCGGACGCGTTGTGCGGCTCGCTaGCATTTGGAGAGATCCAGCTCCCGTTATGTCCCA +
Preference number: 6 (lower is better)
Translates to: PQPRRRTRCAAR*HLERSSSRYVP
Trigger: TGGGACATAACGGGAGCTGGATCTCTCCAAATGCCAGCGAGCCGCACAACGCGTCCGGCGCCGAGGCTGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS CCA 72 bp CTCGGCGCCGGACGCGTTGTGCGGCTCGCTGGCATTTaGAGAGATCCAGCTCCCGTTATGTCCCATGGCGAG +
Preference number: 6 (lower is better)
Translates to: LGAGRVVRLAGI*RDPAPVMSHGE
Trigger: CTCGCCATGGGACATAACGGGAGCTGGATCTCTCCAAATGCCAGCGAGCCGCACAACGCGTCCGGCGCCGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS CCA 72 bp TGCCACCTGGGATACAGAGTCCACTGTGCTCAGGGGTaGGGCAGAGGGCGCAAACTGTGGCCCCTGCTCTCC +
Preference number: 6 (lower is better)
Translates to: CHLGYRVHCAQG*GRGRKLWPLLS
Trigger: GGAGAGCAGGGGCCACAGTTTGCGCCCTCTGCCCCACCCCTGAGCACAGTGGACTCTGTATCCCAGGTGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS CAA 72 bp CCTCGGCGCCGGACGCGTTGTGCGGCTCGCTGGCATTaGGAGAGATCCAGCTCCCGTTATGTCCCATGGCGA +
Preference number: 6 (lower is better)
Translates to: PRRRTRCAARWH*ERSSSRYVPWR
Trigger: TCGCCATGGGACATAACGGGAGCTGGATCTCTCCAAATGCCAGCGAGCCGCACAACGCGTCCGGCGCCGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299092.3
ENST00000561100.2
CDS CCA 72 bp CCTATGAAGATGACGACCTGCACGGTGGTGGTGAACTaGCGGTACAGCTGCGCCTCGCCGAACTCCCCGAGC +
Preference number: 6 (lower is better)
Translates to: PMKMTTCTVVVN*RYSCASPNSPS
Trigger: GCTCGGGGAGTTCGGCGAGGCGCAGCTGTACCGCCAGTTCACCACCACCGTGCAGGTCGTCATCTTCATAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000558041.5
ENST00000561100.2
CDS GCA 72 bp TGTGGAACATCTCCAGGAGCTGGCTACCCGAGCGTATaGTGGGTTCCAGGCTGGCCTCAGCCATGCCACTCC +
Preference number: 6 (lower is better)
Translates to: CGTSPGAGYPSV*WVPGWPQPCHS
Trigger: GGAGTGGCATGGCTGAGGCCAGCCTGGAACCCAGCATACGCTCGGGTAGCCAGCTCCTGGAGATGTTCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS CAA 72 bp GCTGGGCGCCTTGGAATGCCCACTCACTGGCTCCATTaGGGAAGGTGGTACCAGGTGGAAAGCCGAGCAGCG +
Preference number: 6 (lower is better)
Translates to: AGRLGMPTHWLH*GRWYQVESRAA
Trigger: CGCTGCTCGGCTTTCCACCTGGTACCACCTTCCCAAATGGAGCCAGTGAGTGGGCATTCCAAGGCGCCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558041.5
CDS CAA 72 bp GCTGGGCGCCTTGGAATGCCCACTCACTGGCTCCATTaGGGAAGGTGGTACCAGGTGGAAAGCCTTTGCCCT +
Preference number: 6 (lower is better)
Translates to: AGRLGMPTHWLH*GRWYQVESLCP
Trigger: AGGGCAAAGGCTTTCCACCTGGTACCACCTTCCCAAATGGAGCCAGTGAGTGGGCATTCCAAGGCGCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560729.1
CDS CAA 90 bp GCATGTGAGCTGGTTCATGTAAATAAACATTCTCAGACGGGGCGGTaGCCGGGCAGAGGGTCTCCTCACTTCTCAGAGGGGGCGGCAGGC +
Preference number: 6 (lower is better)
Translates to: ACELVHVNKHSQTGR*PGRGSPHFSEGAAG
Trigger: GCCTGCCGCCCCCTCTGAGAAGTGAGGAGACCCTCTGCCCGGCAACCGCCCCGTCTGAGAATGTTTATTTACATGAACCAGCTCACATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560729.1
CDS GCA 72 bp ACACCAGGTGGCCCAAGGAGTTGCTCCAGACTTCCGTaGAGGTGGACGTGGCATAGATGTCAGCCACATTGG +
Preference number: 6 (lower is better)
Translates to: TPGGPRSCSRLP*RWTWHRCQPHW
Trigger: CCAATGTGGCTGACATCTATGCCACGTCCACCTGCACGGAAGTCTGGAGCAACTCCTTGGGCCACCTGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000558041.5
ENST00000560729.1
ENST00000561100.2
CDS CAA 72 bp TCATCTTCCGCTCCACCCTGCCTACCTTGGGCACCTTaGTCTGGATCAGCTCTTCTGGGGTGTTGCCCAAGG +
Preference number: 6 (lower is better)
Translates to: SSSAPPCLPWAP*SGSALLGCCPR
Trigger: CCTTGGGCAACACCCCAGAAGAGCTGATCCAGACAAAGGTGCCCAAGGTAGGCAGGGTGGAGCGGAAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS CCA 72 bp GGTGGCCCAAGGAGTTGCTCCAGACTTCCGTGCAGGTaGACGTGGCATAGATGTCAGCCACATTGGTTACTG +
Preference number: 6 (lower is better)
Translates to: GGPRSCSRLPCR*TWHRCQPHWLL
Trigger: CAGTAACCAATGTGGCTGACATCTATGCCACGTCCACCTGCACGGAAGTCTGGAGCAACTCCTTGGGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000558041.5
ENST00000560729.1
ENST00000561100.2
CDS CCA 72 bp CCACTCACTGGCTCCATTTGGGAAGGTGGTACCAGGTaGAAAGCCGAGCAGCGAGCCTATGAAGATGACGAC +
Preference number: 6 (lower is better)
Translates to: PLTGSIWEGGTR*KAEQRAYEDDD
Trigger: GTCGTCATCTTCATAGGCTCGCTGCTCGGCTTTCCACCTGGTACCACCTTCCCAAATGGAGCCAGTGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558041.5
CDS CAA 72 bp CCCTGCTCTCCCTCCAGGCAGGTGCTAAATATCTCCTaGGCCTGGAAGTCAGCTGAGCCAATGTACTTGGCC +
Preference number: 6 (lower is better)
Translates to: PCSPSRQVLNIS*AWKSAEPMYLA
Trigger: GGCCAAGTACATTGGCTCAGCTGACTTCCAGGCCAAGGAGATATTTAGCACCTGCCTGGAGGGAGAGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS CAA 90 bp AACTGTGGCCCCTGCTCTCCCTCCAGGCAGGTGCTAAATATCTCCTaGGCCTGGAAGTCAGCTGAGCCAATGTACTTGGCCTCACTCTCT +
Preference number: 6 (lower is better)
Translates to: NCGPCSPSRQVLNIS*AWKSAEPMYLASLS
Trigger: AGAGAGTGAGGCCAAGTACATTGGCTCAGCTGACTTCCAGGCCAAGGAGATATTTAGCACCTGCCTGGAGGGAGAGCAGGGGCCACAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS GCA 72 bp TATACACCAGAACGTACACCAGGTGGCCCAAGGAGTTaGTCCAGACTTCCGTGCAGGTGGACGTGGCATAGA +
Preference number: 6 (lower is better)
Translates to: YTPERTPGGPRS*SRLPCRWTWHR
Trigger: TCTATGCCACGTCCACCTGCACGGAAGTCTGGAGCAACTCCTTGGGCCACCTGGTGTACGTTCTGGTGTATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000558041.5
ENST00000560729.1
ENST00000561100.2
CDS GCA 72 bp GGGAATAGAGATGGTGTTCTGTGGGGTCCGGAGCGCTaGTATGATGACCTTCTTCTTCTGGCTGGCACTCAG +
Preference number: 6 (lower is better)
Translates to: GNRDGVLWGPER*YDDLLLLAGTQ
Trigger: CTGAGTGCCAGCCAGAAGAAGAAGGTCATCATAGCAGCGCTCCGGACCCCACAGAACACCATCTCTATTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000558041.5
ENST00000560729.1
ENST00000561100.2
CDS GCA 72 bp CTGACCACATTACGGCGACTGTACCGGTGGTGTAGTTaGACCAGGGTCCCTATCAAGCACTTGCGGACAGAT +
Preference number: 6 (lower is better)
Translates to: LTTLRRLYRWCS*TRVPIKHLRTD
Trigger: ATCTGTCCGCAAGTGCTTGATAGGGACCCTGGTGCAACTACACCACCGGTACAGTCGCCGTAATGTGGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000558041.5
ENST00000561100.2
CDS CCA 72 bp ACCGTGGTGATGTTATACACCAGAACGTACACCAGGTaGCCCAAGGAGTTGCTCCAGACTTCCGTGCAGGTG +
Preference number: 6 (lower is better)
Translates to: TVVMLYTRTYTR*PKELLQTSVQV
Trigger: CACCTGCACGGAAGTCTGGAGCAACTCCTTGGGCCACCTGGTGTACGTTCTGGTGTATAACATCACCACGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000558041.5
ENST00000560729.1
ENST00000561100.2
CDS CCA 72 bp CCGCTGGGAGGCATAGGGAATAGAGATGGTGTTCTGTaGGGTCCGGAGCGCTGCTATGATGACCTTCTTCTT +
Preference number: 6 (lower is better)
Translates to: PLGGIGNRDGVL*GPERCYDDLLL
Trigger: AAGAAGAAGGTCATCATAGCAGCGCTCCGGACCCCACAGAACACCATCTCTATTCCCTATGCCTCCCAGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000558041.5
ENST00000560729.1
ENST00000561100.2
CDS CCA 72 bp CTCCCTGTACTGACCACATTACGGCGACTGTACCGGTaGTGTAGTTGCACCAGGGTCCCTATCAAGCACTTG +
Preference number: 6 (lower is better)
Translates to: LPVLTTLRRLYR*CSCTRVPIKHL
Trigger: CAAGTGCTTGATAGGGACCCTGGTGCAACTACACCACCGGTACAGTCGCCGTAATGTGGTCAGTACAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS CCA 72 bp TCCTCTGTGGGCTTAAAGATCTGCTGCTGCCCAATGTaGAACATCTCCAGGAGCTGGCTACCCGAGCGTATG +
Preference number: 6 (lower is better)
Translates to: SSVGLKICCCPM*NISRSWLPERM
Trigger: CATACGCTCGGGTAGCCAGCTCCTGGAGATGTTCCACATTGGGCAGCAGCAGATCTTTAAGCCCACAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS CCA 72 bp TGTTTCTGCTCATCTTCCGCTCCACCCTGCCTACCTTaGGCACCTTTGTCTGGATCAGCTCTTCTGGGGTGT +
Preference number: 6 (lower is better)
Translates to: CFCSSSAPPCLP*APLSGSALLGC
Trigger: ACACCCCAGAAGAGCTGATCCAGACAAAGGTGCCCAAGGTAGGCAGGGTGGAGCGGAAGATGAGCAGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS CCA 72 bp CTTGGAATGCCCACTCACTGGCTCCATTTGGGAAGGTaGTACCAGGTGGAAAGCCTTTGCCCTTGGAGTGAG +
Preference number: 6 (lower is better)
Translates to: LGMPTHWLHLGR*YQVESLCPWSE
Trigger: CTCACTCCAAGGGCAAAGGCTTTCCACCTGGTACCACCTTCCCAAATGGAGCCAGTGAGTGGGCATTCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560729.1
CDS CAA 72 bp TTGTTTCTGCTCATCTTCCGCTCCACCCTGCCTACCTaGGGCACCTTTGTCTGGATCAGCTCTTCTGGGGTG +
Preference number: 6 (lower is better)
Translates to: LFLLIFRSTLPT*GTFVWISSSGV
Trigger: CACCCCAGAAGAGCTGATCCAGACAAAGGTGCCCAAGGTAGGCAGGGTGGAGCGGAAGATGAGCAGAAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS CAA 72 bp CTGGTTCATGTAAATAAACATTCTCAGACGGGGCGGTaGCCGGGCAGAGGGTCTCCTCACTTCTCAGAGGGG +
Preference number: 6 (lower is better)
Translates to: LVHVNKHSQTGR*PGRGSPHFSEG
Trigger: CCCCTCTGAGAAGTGAGGAGACCCTCTGCCCGGCAACCGCCCCGTCTGAGAATGTTTATTTACATGAACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560729.1
CDS GCA 72 bp ATTGGTTACTGCAAACACAGGGACACTGGCCACCACTaGATGGGCCCAGATGTACATCACCAGTTCACGGGA +
Preference number: 6 (lower is better)
Translates to: IGYCKHRDTGHH*MGPDVHHQFTG
Trigger: TCCCGTGAACTGGTGATGTACATCTGGGCCCATGCAGTGGTGGCCAGTGTCCCTGTGTTTGCAGTAACCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000558041.5
ENST00000560729.1
ENST00000561100.2
CDS GCA 72 bp TCTTCCTCATCCTCTGTGGGCTTAAAGATCTGCTGCTaGCCAATGTGGAACATCTCCAGGAGCTGGCTACCC +
Preference number: 6 (lower is better)
Translates to: SSSSSVGLKICC*PMWNISRSWLP
Trigger: GGGTAGCCAGCTCCTGGAGATGTTCCACATTGGGCAGCAGCAGATCTTTAAGCCCACAGAGGATGAGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS CCA 72 bp TGTCAGCCACATTGGTTACTGCAAACACAGGGACACTaGCCACCACTGCATGGGCCCAGATGTACATCACCA +
Preference number: 6 (lower is better)
Translates to: CQPHWLLQTQGH*PPLHGPRCTSP
Trigger: TGGTGATGTACATCTGGGCCCATGCAGTGGTGGCCAGTGTCCCTGTGTTTGCAGTAACCAATGTGGCTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000558041.5
ENST00000560729.1
ENST00000561100.2
CDS CCA 72 bp TCTCCCTCCAGGCAGGTGCTAAATATCTCCTTGGCCTaGAAGTCAGCTGAGCCAATGTACTTGGCCTCACTC +
Preference number: 6 (lower is better)
Translates to: SPSRQVLNISLA*KSAEPMYLASL
Trigger: GAGTGAGGCCAAGTACATTGGCTCAGCTGACTTCCAGGCCAAGGAGATATTTAGCACCTGCCTGGAGGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS CAA 90 bp CTCACTTTATTGTTTCTGCTCATCTTCCGCTCCACCCTGCCTACCTaGGGCACCTTTGTCTGGATCAGCTCTTCTGGGGTGTTGCCCAAG +
Preference number: 6 (lower is better)
Translates to: LTLLFLLIFRSTLPT*GTFVWISSSGVLPK
Trigger: CTTGGGCAACACCCCAGAAGAGCTGATCCAGACAAAGGTGCCCAAGGTAGGCAGGGTGGAGCGGAAGATGAGCAGAAACAATAAAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS GCA 72 bp CTCTCTTCCTCATCCTCTGTGGGCTTAAAGATCTGCTaGTGCCCAATGTGGAACATCTCCAGGAGCTGGCTA +
Preference number: 6 (lower is better)
Translates to: LSSSSSVGLKIC*CPMWNISRSWL
Trigger: TAGCCAGCTCCTGGAGATGTTCCACATTGGGCAGCAGCAGATCTTTAAGCCCACAGAGGATGAGGAAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS GCA 72 bp TCACTCTCTTCCTCATCCTCTGTGGGCTTAAAGATCTaGTGCTGCCCAATGTGGAACATCTCCAGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: SLSSSSSVGLKI*CCPMWNISRSW
Trigger: CCAGCTCCTGGAGATGTTCCACATTGGGCAGCAGCAGATCTTTAAGCCCACAGAGGATGAGGAAGAGAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS GCA 72 bp CCATTCTCAATTAATATGGTGCTGGGCGCCTTGGAATaGCCACTCACTGGCTCCATTTGGGAAGGTGGTACC +
Preference number: 6 (lower is better)
Translates to: PFSINMVLGALE*PLTGSIWEGGT
Trigger: GGTACCACCTTCCCAAATGGAGCCAGTGAGTGGGCATTCCAAGGCGCCCAGCACCATATTAATTGAGAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558041.5
ENST00000560729.1
CDS CCA 72 bp CCAAGGAGTTGCTCCAGACTTCCGTGCAGGTGGACGTaGCATAGATGTCAGCCACATTGGTTACTGCAAACA +
Preference number: 6 (lower is better)
Translates to: PRSCSRLPCRWT*HRCQPHWLLQT
Trigger: TGTTTGCAGTAACCAATGTGGCTGACATCTATGCCACGTCCACCTGCACGGAAGTCTGGAGCAACTCCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000558041.5
ENST00000560729.1
ENST00000561100.2
CDS CCA 72 bp CCACTCACTGGCTCCATTTGGGAAGGTGGTACCAGGTaGAAAGCCTTTGCCCTTGGAGTGAGAATTCACTTC +
Preference number: 6 (lower is better)
Translates to: PLTGSIWEGGTR*KAFALGVRIHF
Trigger: GAAGTGAATTCTCACTCCAAGGGCAAAGGCTTTCCACCTGGTACCACCTTCCCAAATGGAGCCAGTGAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560729.1
CDS CAA 72 bp GTAAGAAAGAGAACAGGGTTTGCCAGCAGGGAGACTTaGGGCAGCCAAACAGCAGTGAGCAGCAAGAAGACG +
Preference number: 6 (lower is better)
Translates to: VRKRTGFASRET*GSQTAVSSKKT
Trigger: CGTCTTCTTGCTGCTCACTGCTGTTTGGCTGCCCAAAGTCTCCCTGCTGGCAAACCCTGTTCTCTTTCTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000558041.5
ENST00000561100.2
CDS CAA 90 bp ATCCCAGGCAGTCTGCTCTTATCAAGTTTTCTAGTGACCTCCATGTaGCCAAACTCGAGCAGCGAGCCTATGAAGATGACGACCTGCACG +
Preference number: 6 (lower is better)
Translates to: IPGSLLLSSFLVTSM*PNSSSEPMKMTTCT
Trigger: CGTGCAGGTCGTCATCTTCATAGGCTCGCTGCTCGAGTTTGGCAACATGGAGGTCACTAGAAAACTTGATAAGAGCAGACTGCCTGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299092.3
CDS CAA 90 bp CGACTGTACCGGTGGTGTAGTTGCACCAGGGTCCCTATCAAGCACTaGCGGACAGATTTGTTCACAGTAAGAAAGAGAACAGGGTTTGCC +
Preference number: 6 (lower is better)
Translates to: RLYRWCSCTRVPIKH*RTDLFTVRKRTGFA
Trigger: GGCAAACCCTGTTCTCTTTCTTACTGTGAACAAATCTGTCCGCAAGTGCTTGATAGGGACCCTGGTGCAACTACACCACCGGTACAGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000558041.5
ENST00000561100.2
CDS CCA 72 bp CTGGCATTCAGACAGAAGCAGTTGAACTCCAGAGCCTaGGATGTGATCACTACGTCACACTGCCTTCTCATG +
Preference number: 6 (lower is better)
Translates to: LAFRQKQLNSRA*DVITTSHCLLM
Trigger: CATGAGAAGGCAGTGTGACGTAGTGATCACATCCCAGGCTCTGGAGTTCAACTGCTTCTGTCTGAATGCCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543580.7
CDS CAA 90 bp TTGTTCACAGTAAGAAAGAGAACAGGGTTTGCCAGCAGGGAGACTTaGGGCAGCCAAACAGCAGTGAGCAGCAAGAAGACGGAAGTGTCA +
Preference number: 6 (lower is better)
Translates to: LFTVRKRTGFASRET*GSQTAVSSKKTEVS
Trigger: TGACACTTCCGTCTTCTTGCTGCTCACTGCTGTTTGGCTGCCCAAAGTCTCCCTGCTGGCAAACCCTGTTCTCTTTCTTACTGTGAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000558041.5
ENST00000561100.2
CDS CAA 90 bp TGGTGTAGTTGCACCAGGGTCCCTATCAAGCACTTGCGGACAGATTaGTTCACAGTAAGAAAGAGAACAGGGTTTGCCAGCAGGGAGACT +
Preference number: 6 (lower is better)
Translates to: WCSCTRVPIKHLRTD*FTVRKRTGFASRET
Trigger: AGTCTCCCTGCTGGCAAACCCTGTTCTCTTTCTTACTGTGAACAAATCTGTCCGCAAGTGCTTGATAGGGACCCTGGTGCAACTACACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000558041.5
ENST00000561100.2
CDS CAA 90 bp GTGCTAAATATCTCCTTGGCCTGGAAGTCAGCTGAGCCAATGTACTaGGCCTCACTCTCTTCCTCATCCTCTGTGGGCTTAAAGATCTGC +
Preference number: 6 (lower is better)
Translates to: VLNISLAWKSAEPMY*ASLSSSSSVGLKIC
Trigger: GCAGATCTTTAAGCCCACAGAGGATGAGGAAGAGAGTGAGGCCAAGTACATTGGCTCAGCTGACTTCCAGGCCAAGGAGATATTTAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS CAA 90 bp AGGCTGGCACAAATCCCCGAGCAGGCCAGGTTTTTAATGAACCTGTaGGTGACAGATTTGAACACGGTTGTGCGGCAAGTTGACCATAAC +
Preference number: 6 (lower is better)
Translates to: RLAQIPEQARFLMNL*VTDLNTVVRQVDHN
Trigger: GTTATGGTCAACTTGCCGCACAACCGTGTTCAAATCTGTCACCAACAGGTTCATTAAAAACCTGGCCTGCTCGGGGATTTGTGCCAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000543580.7
ENST00000560729.1
ENST00000561100.2
CDS GCA 72 bp TCACTTTATTGTTTCTGCTCATCTTCCGCTCCACCCTaGCTACCTTGGGCACCTTTGTCTGGATCAGCTCTT +
Preference number: 6 (lower is better)
Translates to: SLYCFCSSSAPP*LPWAPLSGSAL
Trigger: AAGAGCTGATCCAGACAAAGGTGCCCAAGGTAGGCAGGGTGGAGCGGAAGATGAGCAGAAACAATAAAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS GCA 72 bp AACTCCAGAGCCTGGGATGTGATCACTACGTCACACTaGCTTCTCATGAAGAGACAACACCTCACAACGCAA +
Preference number: 6 (lower is better)
Translates to: NSRAWDVITTSH*LLMKRQHLTTQ
Trigger: TTGCGTTGTGAGGTGTTGTCTCTTCATGAGAAGGCAGTGTGACGTAGTGATCACATCCCAGGCTCTGGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543580.7
CDS CCA 72 bp CATGGGCCCAGATGTACATCACCAGTTCACGGGACTTaGCATCAGATATTTTCCTCTCCAGTGGATAGAGGA +
Preference number: 6 (lower is better)
Translates to: HGPRCTSPVHGT*HQIFSSPVDRG
Trigger: TCCTCTATCCACTGGAGAGGAAAATATCTGATGCCAAGTCCCGTGAACTGGTGATGTACATCTGGGCCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000558041.5
ENST00000560729.1
ENST00000561100.2
CDS CCA 72 bp AAGTTCCATTCTCAATTAATATGGTGCTGGGCGCCTTaGAATGCCCACTCACTGGCTCCATTTGGGAAGGTG +
Preference number: 6 (lower is better)
Translates to: KFHSQLIWCWAP*NAHSLAPFGKV
Trigger: CACCTTCCCAAATGGAGCCAGTGAGTGGGCATTCCAAGGCGCCCAGCACCATATTAATTGAGAATGGAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558041.5
ENST00000560729.1
CDS GCA 72 bp GACAGATTTGTTCACAGTAAGAAAGAGAACAGGGTTTaGCAGCAGGGAGACTTTGGGCAGCCAAACAGCAGT +
Preference number: 6 (lower is better)
Translates to: DRFVHSKKENRV*QQGDFGQPNSS
Trigger: ACTGCTGTTTGGCTGCCCAAAGTCTCCCTGCTGGCAAACCCTGTTCTCTTTCTTACTGTGAACAAATCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000558041.5
ENST00000561100.2
CDS CAA 72 bp CGGTGGTGTAGTTGCACCAGGGTCCCTATCAAGCACTaGCGGACAGATTTGTTCACAGTAAGAAAGAGAACA +
Preference number: 6 (lower is better)
Translates to: RWCSCTRVPIKH*RTDLFTVRKRT
Trigger: TGTTCTCTTTCTTACTGTGAACAAATCTGTCCGCAAGTGCTTGATAGGGACCCTGGTGCAACTACACCACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000558041.5
ENST00000561100.2
CDS CAA 72 bp CAAATCCCCGAGCAGGCCAGGTTTTTAATGAACCTGTaGGTGACAGATTTGAACACGGTTGTGCGGCAAGTT +
Preference number: 6 (lower is better)
Translates to: QIPEQARFLMNL*VTDLNTVVRQV
Trigger: AACTTGCCGCACAACCGTGTTCAAATCTGTCACCAACAGGTTCATTAAAAACCTGGCCTGCTCGGGGATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000543580.7
ENST00000560729.1
ENST00000561100.2
CDS CAA 90 bp ATCCCCGAGCAGGCCAGGTTTTTAATGAACCTGTTGGTGACAGATTaGAACACGGTTGTGCGGCAAGTTGACCATAACACCATGAAGTTT +
Preference number: 6 (lower is better)
Translates to: IPEQARFLMNLLVTD*NTVVRQVDHNTMKF
Trigger: AAACTTCATGGTGTTATGGTCAACTTGCCGCACAACCGTGTTCAAATCTGTCACCAACAGGTTCATTAAAAACCTGGCCTGCTCGGGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000543580.7
ENST00000560729.1
ENST00000561100.2
CDS GCA 72 bp TTCCCACACTCTGGTGGGAATATGGAAGCTCCCCGTTaGTTCCAAGAATTTACAATCCTTGCTAGGAATCCA +
Preference number: 6 (lower is better)
Translates to: FPHSGGNMEAPR*FQEFTILARNP
Trigger: TGGATTCCTAGCAAGGATTGTAAATTCTTGGAAGCAACGGGGAGCTTCCATATTCCCACCAGAGTGTGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS CAA 72 bp AGTCTGCTCTTATCAAGTTTTCTAGTGACCTCCATGTaGCCAAACTCGAGCAGCGAGCCTATGAAGATGACG +
Preference number: 6 (lower is better)
Translates to: SLLLSSFLVTSM*PNSSSEPMKMT
Trigger: CGTCATCTTCATAGGCTCGCTGCTCGAGTTTGGCAACATGGAGGTCACTAGAAAACTTGATAAGAGCAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299092.3
CDS CAA 72 bp CAGGCCAGGTTTTTAATGAACCTGTTGGTGACAGATTaGAACACGGTTGTGCGGCAAGTTGACCATAACACC +
Preference number: 6 (lower is better)
Translates to: QARFLMNLLVTD*NTVVRQVDHNT
Trigger: GGTGTTATGGTCAACTTGCCGCACAACCGTGTTCAAATCTGTCACCAACAGGTTCATTAAAAACCTGGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000543580.7
ENST00000560729.1
ENST00000561100.2
CDS GCA 72 bp AAAATGAAACGTAAGTTCCATTCTCAATTAATATGGTaGTGGGCGCCTTGGAATGCCCACTCACTGGCTCCA +
Preference number: 6 (lower is better)
Translates to: KMKRKFHSQLIW*WAPWNAHSLAP
Trigger: TGGAGCCAGTGAGTGGGCATTCCAAGGCGCCCAGCACCATATTAATTGAGAATGGAACTTACGTTTCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558041.5
ENST00000560729.1
CDS CCA 72 bp ATGAAACGTAAGTTCCATTCTCAATTAATATGGTGCTaGGCGCCTTGGAATGCCCACTCACTGGCTCCATTT +
Preference number: 6 (lower is better)
Translates to: MKRKFHSQLIWC*APWNAHSLAPF
Trigger: AAATGGAGCCAGTGAGTGGGCATTCCAAGGCGCCCAGCACCATATTAATTGAGAATGGAACTTACGTTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558041.5
ENST00000560729.1
CDS CCA 72 bp CTGAAAATGAAACGTAAGTTCCATTCTCAATTAATATaGTGCTGGGCGCCTTGGAATGCCCACTCACTGGCT +
Preference number: 6 (lower is better)
Translates to: LKMKRKFHSQLI*CWAPWNAHSLA
Trigger: AGCCAGTGAGTGGGCATTCCAAGGCGCCCAGCACCATATTAATTGAGAATGGAACTTACGTTTCATTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558041.5
ENST00000560729.1
CDS CAA 72 bp TGGAAGCTCCCCGTTGCTTCCAAGAATTTACAATCCTaGCTAGGAATCCACCTTTGGAAAAATGCTCACTTT +
Preference number: 6 (lower is better)
Translates to: WKLPVASKNLQS*LGIHLWKNAHF
Trigger: AAAGTGAGCATTTTTCCAAAGGTGGATTCCTAGCAAGGATTGTAAATTCTTGGAAGCAACGGGGAGCTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2
CDS CAA 90 bp GTGGGAATATGGAAGCTCCCCGTTGCTTCCAAGAATTTACAATCCTaGCTAGGAATCCACCTTTGGAAAAATGCTCACTTTATTGTTTCT +
Preference number: 6 (lower is better)
Translates to: VGIWKLPVASKNLQS*LGIHLWKNAHFIVS
Trigger: AGAAACAATAAAGTGAGCATTTTTCCAAAGGTGGATTCCTAGCAAGGATTGTAAATTCTTGGAAGCAACGGGGAGCTTCCATATTCCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299092.3
ENST00000543580.7
ENST00000561100.2