RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPR173 (Homo sapiens)

Ensembl gene IDs: ENSG00000184194

Ensembl transcript IDs: ENST00000332582.5, ENST00000375466.2

Found 281 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGGAGATGAGGTTTTCAAGTTCCCTGGCGGCCCCAGCCCTCCCGTaGTCAGGGCCTGGGCCAAGGGAGGCCCATCTTGTGAGATGGGAG +
Preference number: 1 (lower is better)
Translates to: EEMRFSSSLAAPALP*SGPGPREAHLVRWE
Trigger: CTCCCATCTCACAAGATGGGCCTCCCTTGGCCCAGGCCCTGAGCACGGGAGGGCTGGGGCCGCCAGGGAACTTGAAAACCTCATCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CCA 90 bp CCTCTTTCCCAGTCCCTCGCCCAGTCCTCCATCCTTGGGAGGTGTTaGCAAAGGTGCCTAGATTACAGGTGGTTCGAGGGGCTGGGGCTG +
Preference number: 1 (lower is better)
Translates to: PLSQSLAQSSILGRC*QRCLDYRWFEGLGL
Trigger: CAGCCCCAGCCCCTCGAACCACCTGTAATCTAGGCACCTTTGCCAACACCTCCCAAGGATGGAGGACTGGGCGAGGGACTGGGAAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR GCA 90 bp CTACTCTGGGGAGTTCAGCTCCCTCCTTACACTTTCCTGGTGGGCTaGTCCTGCCTGTATGGCACCCACATCAGTCCTAGTGGGGCTGGA +
Preference number: 1 (lower is better)
Translates to: LLWGVQLPPYTFLVG*SCLYGTHISPSGAG
Trigger: TCCAGCCCCACTAGGACTGATGTGGGTGCCATACAGGCAGGAGCAGCCCACCAGGAAAGTGTAAGGAGGGAGCTGAACTCCCCAGAGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CCA 90 bp TCCAGCTACTCTGGGGAGTTCAGCTCCCTCCTTACACTTTCCTGGTaGGCTGCTCCTGCCTGTATGGCACCCACATCAGTCCTAGTGGGG +
Preference number: 1 (lower is better)
Translates to: SSYSGEFSSLLTLSW*AAPACMAPTSVLVG
Trigger: CCCCACTAGGACTGATGTGGGTGCCATACAGGCAGGAGCAGCCCACCAGGAAAGTGTAAGGAGGGAGCTGAACTCCCCAGAGTAGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR GCA 90 bp TGGGAGGAGGCTTGGATCTCCCTCCTGGAGAATCTGACTGCAGTGTaGTCCACTTTGGGTGTAGGTAAGGGTGGGGGAAGGATGGGGAAG +
Preference number: 1 (lower is better)
Translates to: WEEAWISLLENLTAV*STLGVGKGGGRMGK
Trigger: CTTCCCCATCCTTCCCCCACCCTTACCTACACCCAAAGTGGAGCACACTGCAGTCAGATTCTCCAGGAGGGAGATCCAAGCCTCCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CCA 90 bp TCCTCCATCCTTGGGAGGTGTTGGCAAAGGTGCCTAGATTACAGGTaGTTCGAGGGGCTGGGGCTGGAGCTCAGAAAGGAGGACTCCTGT +
Preference number: 1 (lower is better)
Translates to: SSILGRCWQRCLDYR*FEGLGLELRKEDSC
Trigger: ACAGGAGTCCTCCTTTCTGAGCTCCAGCCCCAGCCCCTCGAACCACCTGTAATCTAGGCACCTTTGCCAACACCTCCCAAGGATGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CCA 90 bp TGGTCCAGCTACTCTGGGGAGTTCAGCTCCCTCCTTACACTTTCCTaGTGGGCTGCTCCTGCCTGTATGGCACCCACATCAGTCCTAGTG +
Preference number: 1 (lower is better)
Translates to: WSSYSGEFSSLLTLS*WAAPACMAPTSVLV
Trigger: CACTAGGACTGATGTGGGTGCCATACAGGCAGGAGCAGCCCACCAGGAAAGTGTAAGGAGGGAGCTGAACTCCCCAGAGTAGCTGGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CCA 90 bp CTTGGCTCACCAATCCACAGAACAGGCCTCAAAGTAAGCCCAGAGTaGACTCCACCCCTGGGAGGAGGCTTGGATCTCCCTCCTGGAGAA +
Preference number: 1 (lower is better)
Translates to: LGSPIHRTGLKVSPE*TPPLGGGLDLPPGE
Trigger: TTCTCCAGGAGGGAGATCCAAGCCTCCTCCCAGGGGTGGAGTCCACTCTGGGCTTACTTTGAGGCCTGTTCTGTGGATTGGTGAGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CCA 90 bp CTAGAGTGCCCTCCCCATTCTGTATGGGTCAGGCTTCCCCAGTTCTaGGGCTCTCTTGGGCTAGGGAGGGAGTTTAGGACAGGGACTTCT +
Preference number: 1 (lower is better)
Translates to: LECPPHSVWVRLPQF*GSLGLGREFRTGTS
Trigger: AGAAGTCCCTGTCCTAAACTCCCTCCCTAGCCCAAGAGAGCCCCAGAACTGGGGAAGCCTGACCCATACAGAATGGGGAGGGCACTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CCA 90 bp CTCCCGTGCTCAGGGCCTGGGCCAAGGGAGGCCCATCTTGTGAGATaGGAGTCTACCCTCTTGCTACCGACCTATGTAGTTTCCAAGATC +
Preference number: 1 (lower is better)
Translates to: LPCSGPGPREAHLVR*ESTLLLPTYVVSKI
Trigger: GATCTTGGAAACTACATAGGTCGGTAGCAAGAGGGTAGACTCCCATCTCACAAGATGGGCCTCCCTTGGCCCAGGCCCTGAGCACGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CCA 90 bp CCCTGGGAACCCAGCACCCCCTTTGGTCCCTCTTGTCAGCAGCCTTaGACCACTTTCTCCCTAAACATCCAGGCCTTGCTAAAGGACTTG +
Preference number: 1 (lower is better)
Translates to: PWEPSTPFGPSCQQP*TTFSLNIQALLKDL
Trigger: CAAGTCCTTTAGCAAGGCCTGGATGTTTAGGGAGAAAGTGGTCCAAGGCTGCTGACAAGAGGGACCAAAGGGGGTGCTGGGTTCCCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR TCA 90 bp TCACCTAACCTGGGCCCATCCTTGGGGCCCTTCTCCCTACTCCCTTaGCTTCTCCAACAGATGCACAAGAACCATTTGGGAGGTCTGGAC +
Preference number: 1 (lower is better)
Translates to: SPNLGPSLGPFSLLP*LLQQMHKNHLGGLD
Trigger: GTCCAGACCTCCCAAATGGTTCTTGTGCATCTGTTGGAGAAGTCAAGGGAGTAGGGAGAAGGGCCCCAAGGATGGGCCCAGGTTAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CCA 90 bp ACTAAATATGCCTCTTTCCCAGTCCCTCGCCCAGTCCTCCATCCTTaGGAGGTGTTGGCAAAGGTGCCTAGATTACAGGTGGTTCGAGGG +
Preference number: 1 (lower is better)
Translates to: TKYASFPVPRPVLHP*EVLAKVPRLQVVRG
Trigger: CCCTCGAACCACCTGTAATCTAGGCACCTTTGCCAACACCTCCCAAGGATGGAGGACTGGGCGAGGGACTGGGAAAGAGGCATATTTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CCA 90 bp CTTCAGTTCGAGGAGTTCAGCTCACATCTTACTCTTCACCTAACCTaGGCCCATCCTTGGGGCCCTTCTCCCTACTCCCTTGACTTCTCC +
Preference number: 1 (lower is better)
Translates to: LQFEEFSSHLTLHLT*AHPWGPSPYSLDFS
Trigger: GGAGAAGTCAAGGGAGTAGGGAGAAGGGCCCCAAGGATGGGCCCAGGTTAGGTGAAGAGTAAGATGTGAGCTGAACTCCTCGAACTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CCA 90 bp GGGGCTGGGGATCCTGAAGGCAGCGTGAGAGAATGTGACCAAGTGTaGGTCTCTTCAGTTCGAGGAGTTCAGCTCACATCTTACTCTTCA +
Preference number: 1 (lower is better)
Translates to: GAGDPEGSVRECDQV*VSSVRGVQLTSYSS
Trigger: TGAAGAGTAAGATGTGAGCTGAACTCCTCGAACTGAAGAGACCCACACTTGGTCACATTCTCTCACGCTGCCTTCAGGATCCCCAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CCA 90 bp ATAGTAATTAAACATCCCTGCTCCCTGGGAACCCAGCACCCCCTTTaGTCCCTCTTGTCAGCAGCCTTGGACCACTTTCTCCCTAAACAT +
Preference number: 1 (lower is better)
Translates to: IVIKHPCSLGTQHPL*SLLSAALDHFLPKH
Trigger: ATGTTTAGGGAGAAAGTGGTCCAAGGCTGCTGACAAGAGGGACCAAAGGGGGTGCTGGGTTCCCAGGGAGCAGGGATGTTTAATTACTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR GCA 90 bp TTTGTCTCCTCTCAACTGTGGTGTGTGTGTGTGTGTGTGTATGCATaGACGTGCTGTATCTGTCCCCATATACAGGCATTTTACGTGTGT +
Preference number: 1 (lower is better)
Translates to: FVSSQLWCVCVCVYA*TCCICPHIQAFYVC
Trigger: ACACACGTAAAATGCCTGTATATGGGGACAGATACAGCACGTGCATGCATACACACACACACACACACACCACAGTTGAGAGGAGACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CCA 90 bp GACAAAAAGAGGTCAGATAGGAATGGACTCAAGTCCACAGTGCCTTaGAGTTTGTACCGCTATCGGTTACCAAGGCCCCAAACAAATTTT +
Preference number: 1 (lower is better)
Translates to: DKKRSDRNGLKSTVP*SLYRYRLPRPQTNF
Trigger: AAAATTTGTTTGGGGCCTTGGTAACCGATAGCGGTACAAACTCCAAGGCACTGTGGACTTGAGTCCATTCCTATCTGACCTCTTTTTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR CCA 90 bp CAGGCCTTGCTAAAGGACTTGGAAGGGGAGGGTGCATGGGAGCAGAGGGGGCAACCCCTCCCTTGCTGTTaGCCCCATCACGGTGGCCAT +
Preference number: 2 (lower is better)
Translates to: QALLKDLEGEGAWEQRGQPLPCC*PHHGGH
Trigger: ATGGCCACCGTGATGGGGCCAACAGCAAGGGAGGGG...TTGCCCCCTCTGCTCCCATGCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CAA 90 bp GCCTCTTTCCCAGTCCCTCGCCCAGTCCTCCATCCTTGGGAGGTGTaGGCAAAGGTGCCTAGATTACAGGTGGTTCGAGGGGCTGGGGCT +
Preference number: 2 (lower is better)
Translates to: ASFPVPRPVLHPWEV*AKVPRLQVVRGAGA
Trigger: AGCCCCAGCCCCTCGAACCACCTGTAATCTAGGCACCTTTGCCAACACCTCCCAAGGATGGAGGACTGGGCGAGGGACTGGGAAAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR CCA 90 bp TCAGGGCCTGGGCCAAGGGAGGCCCATCTTGTGAGATGGGAGTCTACCCTCTTGAGGAGGACTCCTGTATaGGCCCCTACCCCTCCCTTG +
Preference number: 2 (lower is better)
Translates to: SGPGPREAHLVRWESTLLRRTPV*APTPPL
Trigger: CAAGGGAGGGGTAGGGGCCCATACAGGAGTCCTCCT...CAAGAGGGTAGACTCCCATCTCACAAGATGGGCCTCCCTTGGCCCAGGCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR CCA 90 bp TCCTGCCTAGAGTGCCCTCCCCATTCTGTATGGGTCAGGCTTCCCCAGTTCTGGAGTGGACTCCACCCCTaGGAGGAGGCTTGGATCTCC +
Preference number: 2 (lower is better)
Translates to: SCLECPPHSVWVRLPQFWSGLHP*EEAWIS
Trigger: GGAGATCCAAGCCTCCTCCCAGGGGTGGAGTCCACT...CCAGAACTGGGGAAGCCTGACCCATACAGAATGGGGAGGGCACTCTAGGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR GCA 90 bp ATGTCTCTCCTGCCTAGAGTGCCCTCCCCATTCTGTATGGGTCAGGCTTCCCCAGTTGGGAAAGAAGGATaGTTGGGGCTCAGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: MSLLPRVPSPFCMGQASPVGKEG*LGLRAQ
Trigger: CTGGGCCCTGAGCCCCAAGCATCCTTCTTTCCCAAC...TGGGGAAGCCTGACCCATACAGAATGGGGAGGGCACTCTAGGCAGGAGAGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR GCA 90 bp TTTGGGAAGGAGACTGAGACGGGGTTGAGATGGGGCTACAGGCTTTGTGAGGAGGTCAGACAGGGCACATaGACGCACGCACGCACACAC +
Preference number: 2 (lower is better)
Translates to: FGKETETGLRWGYRLCEEVRQGT*THARTH
Trigger: GTGTGTGCGTGCGTGCGTGCATGTGCCCTGTCTGAC...CTCCTCACAAAGCCTGTAGCCCCATCTCAACCCCGTCTCAGTCTCCTTCCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CAA 90 bp TCTTGTCAGCAGCCTTGGACCACTTTCTCCCTAAACATCCAGGCCTaGCTAAAGGACTTGGAAGGGGAGGGTGCATGGGAGCAGAGGGGG +
Preference number: 2 (lower is better)
Translates to: SCQQPWTTFSLNIQA*LKDLEGEGAWEQRG
Trigger: CCCCCTCTGCTCCCATGCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTGGATGTTTAGGGAGAAAGTGGTCCAAGGCTGCTGACAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CAA 90 bp AAACATCCCTGCTCCCTGGGAACCCAGCACCCCCTTTGGTCCCTCTaGTCAGCAGCCTTGGACCACTTTCTCCCTAAACATCCAGGCCTT +
Preference number: 2 (lower is better)
Translates to: KHPCSLGTQHPLWSL*SAALDHFLPKHPGL
Trigger: AAGGCCTGGATGTTTAGGGAGAAAGTGGTCCAAGGCTGCTGACAAGAGGGACCAAAGGGGGTGCTGGGTTCCCAGGGAGCAGGGATGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR GCA 90 bp TTGGTCAAAGCTGACCAAAGTCCCAGCTGCATACAGTGGCCCCTAGGAAGGGCTACTTTCCTGGTGGGCTaGTCCTGCCTGTATGGCACC +
Preference number: 2 (lower is better)
Translates to: LVKADQSPSCIQWPLGRATFLVG*SCLYGT
Trigger: GGTGCCATACAGGCAGGAGCAGCCCACCAGGAAAGT...AGCCCTTCCTAGGGGCCACTGTATGCAGCTGGGACTTTGGTCAGCTTTGACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR CCA 90 bp TTGGTCAAAGCTGACCAAAGTCCCAGCTGCATACAGTGGCCCCTAGGAAGGGCTGGAAAGAAGGATGCTTaGGGCTCAGGGCCCAGTCAG +
Preference number: 2 (lower is better)
Translates to: LVKADQSPSCIQWPLGRAGKKDA*GSGPSQ
Trigger: CTGACTGGGCCCTGAGCCCCAAGCATCCTTCTTTCC...AGCCCTTCCTAGGGGCCACTGTATGCAGCTGGGACTTTGGTCAGCTTTGACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR GCA 90 bp ATGTCTCTCCTGCCTAGAGTGCCCTCCCCATTCTGTATGGGTCAGGCTTCCCCACCTGGAGAATCTGACTaGAGTGTGCTCCACTTTGGG +
Preference number: 2 (lower is better)
Translates to: MSLLPRVPSPFCMGQASPPGESD*SVLHFG
Trigger: CCCAAAGTGGAGCACACTGCAGTCAGATTCTCCAGG...TGGGGAAGCCTGACCCATACAGAATGGGGAGGGCACTCTAGGCAGGAGAGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR CCA 90 bp CACTTTCTCCCTAAACATCCAGGCCTTGCTAAAGGACTTGGAAGGGGAGGGTGCTGCCTAGATTACAGGTaGTTCGAGGGGCTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: HFLPKHPGLAKGLGRGGCCLDYR*FEGLGL
Trigger: CAGCCCCAGCCCCTCGAACCACCTGTAATCTAGGCA...GCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTGGATGTTTAGGGAGAAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR CCA 90 bp CACCCCTGGGAGGAGGCTTGGATCTCCCTCCTGGAGAATCTGACTGCAGTGTGCATCCTTGGGAGGTGTTaGCAAAGGTGCCTAGATTAC +
Preference number: 2 (lower is better)
Translates to: HPWEEAWISLLENLTAVCILGRC*QRCLDY
Trigger: GTAATCTAGGCACCTTTGCCAACACCTCCCAAGGAT...GCACACTGCAGTCAGATTCTCCAGGAGGGAGATCCAAGCCTCCTCCCAGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR CCA 90 bp TTTGGGAAGGAGACTGAGACGGGGTTGAGATGGGGCTACAGGCTTTGTGAGGAGAGAAGAGACTGGGCTTaGGGCAAGGGTTGGCCTAAA +
Preference number: 2 (lower is better)
Translates to: FGKETETGLRWGYRLCEERRDWA*GKGWPK
Trigger: TTTAGGCCAACCCTTGCCCCAAGCCCAGTCTCTTCT...CTCCTCACAAAGCCTGTAGCCCCATCTCAACCCCGTCTCAGTCTCCTTCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR CCA 90 bp ATGTCTCTCCTGCCTAGAGTGCCCTCCCCATTCTGTATGGGTCAGGCTTCCCCATGCACAAGAACCATTTaGGAGGTCTGGACATGGTGG +
Preference number: 2 (lower is better)
Translates to: MSLLPRVPSPFCMGQASPCTRTI*EVWTWW
Trigger: CCACCATGTCCAGACCTCCCAAATGGTTCTTGTGCA...TGGGGAAGCCTGACCCATACAGAATGGGGAGGGCACTCTAGGCAGGAGAGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR CCA 90 bp TCATTAATGTCTCTCCTGCCTAGAGTGCCCTCCCCATTCTGTATGGGTCAGGCTGTGGTCCAGCTACTCTaGGGAGTTCAGCTCCCTCCT +
Preference number: 2 (lower is better)
Translates to: SLMSLLPRVPSPFCMGQAVVQLL*GVQLPP
Trigger: AGGAGGGAGCTGAACTCCCCAGAGTAGCTGGACCAC...AGCCTGACCCATACAGAATGGGGAGGGCACTCTAGGCAGGAGAGACATTAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR CCA 90 bp CCTGCCTGTATGGCACCCACATCAGTCCTAGTGGGGCTGGAGTGGATTTCCATCTCTTGTCAGCAGCCTTaGACCACTTTCTCCCTAAAC +
Preference number: 2 (lower is better)
Translates to: PACMAPTSVLVGLEWISISCQQP*TTFSLN
Trigger: GTTTAGGGAGAAAGTGGTCCAAGGCTGCTGACAAGA...GATGGAAATCCACTCCAGCCCCACTAGGACTGATGTGGGTGCCATACAGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR CCA 90 bp AGGAACACCTTGTTTGAGTTTGGGAAGGAGACTGAGACGGGGTTGAGATGGGGCGGGAAGGAGGGTTGTTaGGAAAGAAGGATGCTTGGG +
Preference number: 2 (lower is better)
Translates to: RNTLFEFGKETETGLRWGGKEGC*ERRMLG
Trigger: CCCAAGCATCCTTCTTTCCCAACAACCCTCCTTCCC...GCCCCATCTCAACCCCGTCTCAGTCTCCTTCCCAAACTCAAACAAGGTGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR TCA 90 bp TTTGGGAAGGAGACTGAGACGGGGTTGAGATGGGGCTACAGGCTTTGTGAGGAGTTCAGAAGAGTAGGGTaGACCCGAGAGACAATTCTG +
Preference number: 2 (lower is better)
Translates to: FGKETETGLRWGYRLCEEFRRVG*TRETIL
Trigger: CAGAATTGTCTCTCGGGTTCACCCTACTCTTCTGAA...CTCCTCACAAAGCCTGTAGCCCCATCTCAACCCCGTCTCAGTCTCCTTCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR GCA 90 bp CCTGCCTGTATGGCACCCACATCAGTCCTAGTGGGGCTGGAGTGGATTTCCATCGACTTCTCCAACAGATaGACAAGAACCATTTGGGAG +
Preference number: 2 (lower is better)
Translates to: PACMAPTSVLVGLEWISIDFSNR*TRTIWE
Trigger: CTCCCAAATGGTTCTTGTGCATCTGTTGGAGAAGTC...GATGGAAATCCACTCCAGCCCCACTAGGACTGATGTGGGTGCCATACAGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR GCA 90 bp TTTGGGAAGGAGACTGAGACGGGGTTGAGATGGGGCTACAGGCTTTGTGAGGAGGGCATTTTACGTGTGTaGACCGGGCAAGTTTTCTTC +
Preference number: 2 (lower is better)
Translates to: FGKETETGLRWGYRLCEEGILRV*TGQVFF
Trigger: GAAGAAAACTTGCCCGGTGCACACACGTAAAATGCC...CTCCTCACAAAGCCTGTAGCCCCATCTCAACCCCGTCTCAGTCTCCTTCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR CCA 90 bp CTAACCTCATCAGTTTCCCTCACATTTGATCCTCAATTCCCAGTCCCCATTCTCAGGCTTCCCCAGTTCTaGGGCTCTCTTGGGCTAGGG +
Preference number: 2 (lower is better)
Translates to: LTSSVSLTFDPQFPVPILRLPQF*GSLGLG
Trigger: CCCTAGCCCAAGAGAGCCCCAGAACTGGGGAAGCCT...GAGAATGGGGACTGGGAATTGAGGATCAAATGTGAGGGAAACTGATGAGGTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR CCA 90 bp CATCAGTTTCCCTCACATTTGATCCTCAATTCCCAGTCCCCATTCTCCATGGTGGAGACGGGGTTGAGATaGGGCTACAGGCTTTGTGAG +
Preference number: 2 (lower is better)
Translates to: HQFPSHLILNSQSPFSMVETGLR*GYRLCE
Trigger: CTCACAAAGCCTGTAGCCCCATCTCAACCCCGTCTC...CACCATGGAGAATGGGGACTGGGAATTGAGGATCAAATGTGAGGGAAACTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR CCA 90 bp CTAACCTCATCAGTTTCCCTCACATTTGATCCTCAATTCCCAGTCCCCATTCTCCTCAGGAAGAAGAGTTaGGGGCTGGGGATCCTGAAG +
Preference number: 2 (lower is better)
Translates to: LTSSVSLTFDPQFPVPILLRKKS*GLGILK
Trigger: CTTCAGGATCCCCAGCCCCCAACTCTTCTTCCTGAG...GAGAATGGGGACTGGGAATTGAGGATCAAATGTGAGGGAAACTGATGAGGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR CCA 90 bp ATCCATCTCTTGACCACTCGACTTCCTACCACGGGCACATACTCTAGTTTGTCTCTTACACTTTCCTGGTaGGCTGCTCCTGCCTGTATG +
Preference number: 2 (lower is better)
Translates to: IHLLTTRLPTTGTYSSLSLTLSW*AAPACM
Trigger: CATACAGGCAGGAGCAGCCCACCAGGAAAGTGTAAG...AGACAAACTAGAGTATGTGCCCGTGGTAGGAAGTCGAGTGGTCAAGAGATGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CAA 90 bp CATCTCTTGACCACTCGACTTCCTACCACGGGCACATACTCTAGTTaGTCTCCTCTCAACTGTGGTGTGTGTGTGTGTGTGTGTATGCAT +
Preference number: 2 (lower is better)
Translates to: HLLTTRLPTTGTYSS*SPLNCGVCVCVCMH
Trigger: ATGCATACACACACACACACACACACCACAGTTGAGAGGAGACAAACTAGAGTATGTGCCCGTGGTAGGAAGTCGAGTGGTCAAGAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR TCA 90 bp GTGTGGGTCTCTTCAGTTCGAGGAGTTCAGCTCACATCTTACTCTTCACCTAACTTCTCCCTACTCCCTTaGCTTCTCCAACAGATGCAC +
Preference number: 2 (lower is better)
Translates to: VWVSSVRGVQLTSYSSPNFSLLP*LLQQMH
Trigger: GTGCATCTGTTGGAGAAGTCAAGGGAGTAGGGAGAA...GTTAGGTGAAGAGTAAGATGTGAGCTGAACTCCTCGAACTGAAGAGACCCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR CCA 90 bp TTTGATCCTCAATTCCCAGTCCCCATTCTCCATGGTGGTCCAATTTTAGGAACACTCCTTACACTTTCCTaGTGGGCTGCTCCTGCCTGT +
Preference number: 2 (lower is better)
Translates to: FDPQFPVPILHGGPILGTLLTLS*WAAPAC
Trigger: ACAGGCAGGAGCAGCCCACCAGGAAAGTGTAAGGAG...TGTTCCTAAAATTGGACCACCATGGAGAATGGGGACTGGGAATTGAGGATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CAA 90 bp TCTACCCTCTTGCTACCGACCTATGTAGTTTCCAAGATCCATCTCTaGACCACTCGACTTCCTACCACGGGCACATACTCTAGTTTGTCT +
Preference number: 2 (lower is better)
Translates to: STLLLPTYVVSKIHL*TTRLPTTGTYSSLS
Trigger: AGACAAACTAGAGTATGTGCCCGTGGTAGGAAGTCGAGTGGTCAAGAGATGGATCTTGGAAACTACATAGGTCGGTAGCAAGAGGGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR TCA 90 bp GCACATACTCTAGTTTGTCTCCTCTCAACTGTGGTGTGTGTGTGTGTGTGTGTAATCCTGAAGGCAGCGTaGGAGAATGTGACCAAGTGT +
Preference number: 2 (lower is better)
Translates to: AHTLVCLLSTVVCVCVCVILKAA*ENVTKC
Trigger: ACACTTGGTCACATTCTCTCACGCTGCCTTCAGGAT...TACACACACACACACACACACCACAGTTGAGAGGAGACAAACTAGAGTATGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR CCA 90 bp CATCAGTTTCCCTCACATTTGATCCTCAATTCCCAGTCCCCATTCTCCATGGTGGAATGTGACCAAGTGTaGGTCTCTTCAGTTCGAGGA +
Preference number: 2 (lower is better)
Translates to: HQFPSHLILNSQSPFSMVECDQV*VSSVRG
Trigger: TCCTCGAACTGAAGAGACCCACACTTGGTCACATTC...CACCATGGAGAATGGGGACTGGGAATTGAGGATCAAATGTGAGGGAAACTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR GCA 90 bp CTAACCTCATCAGTTTCCCTCACATTTGATCCTCAATTCCCAGTCCCCATTCTCAGGTGTTGGCAAAGGTaGCTAGATTACAGGTGGTTC +
Preference number: 2 (lower is better)
Translates to: LTSSVSLTFDPQFPVPILRCWQR*LDYRWF
Trigger: GAACCACCTGTAATCTAGGCACCTTTGCCAACACCT...GAGAATGGGGACTGGGAATTGAGGATCAAATGTGAGGGAAACTGATGAGGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR GCA 90 bp TTTGATCCTCAATTCCCAGTCCCCATTCTCCATGGTGGTCCAATTTTAGGAACAGACTCAAGTCCACAGTaGCTTGGAGTTTGTACCGCT +
Preference number: 2 (lower is better)
Translates to: FDPQFPVPILHGGPILGTDSSPQ*LGVCTA
Trigger: AGCGGTACAAACTCCAAGGCACTGTGGACTTGAGTC...TGTTCCTAAAATTGGACCACCATGGAGAATGGGGACTGGGAATTGAGGATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR CCA 90 bp CTAACCTCATCAGTTTCCCTCACATTTGATCCTCAATTCCCAGTCCCCATTCTCACAAATTCCCCCTTCTaGACAGTGTCAGAAGGAGAG +
Preference number: 2 (lower is better)
Translates to: LTSSVSLTFDPQFPVPILTNSPF*TVSEGE
Trigger: CTCTCCTTCTGACACTGTCCAGAAGGGGGAATTTGT...GAGAATGGGGACTGGGAATTGAGGATCAAATGTGAGGGAAACTGATGAGGTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CAA 90 bp AAGAGGTCAGATAGGAATGGACTCAAGTCCACAGTGCCTTGGAGTTaGTACCGCTATCGGTTACCAAGGCCCCAAACAAATTTTCATCTT +
Preference number: 2 (lower is better)
Translates to: KRSDRNGLKSTVPWS*YRYRLPRPQTNFHL
Trigger: AAGATGAAAATTTGTTTGGGGCCTTGGTAACCGATAGCGGTACAAACTCCAAGGCACTGTGGACTTGAGTCCATTCCTATCTGACCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR GCA 90 bp CTAACCTCATCAGTTTCCCTCACATTTGATCCTCAATTCCCAGTCCCCATTCTCGTGTATGCATGCACGTaGTGTATCTGTCCCCATATA +
Preference number: 2 (lower is better)
Translates to: LTSSVSLTFDPQFPVPILVYACT*CICPHI
Trigger: TATATGGGGACAGATACAGCACGTGCATGCATACAC...GAGAATGGGGACTGGGAATTGAGGATCAAATGTGAGGGAAACTGATGAGGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR CCA 90 bp TTTGATCCTCAATTCCCAGTCCCCATTCTCCATGGTGGTCCAATTTTAGGAACAGAAGGGAAAGGGGGATaGATAAATACAGATTCCGGC +
Preference number: 2 (lower is better)
Translates to: FDPQFPVPILHGGPILGTEGKGG*INTDSG
Trigger: GCCGGAATCTGTATTTATCCATCCCCCTTTCCCTTC...TGTTCCTAAAATTGGACCACCATGGAGAATGGGGACTGGGAATTGAGGATCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR TCA 90 bp GCACATACTCTAGTTTGTCTCCTCTCAACTGTGGTGTGTGTGTGTGTGTGTGTAGAGAGAGAGAGAGAATaGGATTGTAGAAGTGGAGAA +
Preference number: 2 (lower is better)
Translates to: AHTLVCLLSTVVCVCVCVERERE*DCRSGE
Trigger: TTCTCCACTTCTACAATCTCATTCTCTCTCTCTCTC...TACACACACACACACACACACCACAGTTGAGAGGAGACAAACTAGAGTATGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR GCA 72 bp GGCTCCCCTACTCCCAGCCTCTCAGCCACTCTGGCCTaGCTTTCCAGGGCCACTCTGCAGCCAGGCTCATTA +
Preference number: 3 (lower is better)
Translates to: GSPTPSLSATLA*LSRATLQPGSL
Trigger: TAATGAGCCTGGCTGCAGAGTGGCCCTGGAAAGGCAGGCCAGAGTGGCTGAGAGGCTGGGAGTAGGGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR TCA 72 bp CGTGCTCAGGGCCTGGGCCAAGGGAGGCCCATCTTGTaGGATGGGAGTCTACCCTCTTGCTACCGACCTATG +
Preference number: 3 (lower is better)
Translates to: RAQGLGQGRPIL*DGSLPSCYRPM
Trigger: CATAGGTCGGTAGCAAGAGGGTAGACTCCCATCTCACAAGATGGGCCTCCCTTGGCCCAGGCCCTGAGCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR GCA 72 bp GCCCAGTCCTCCATCCTTGGGAGGTGTTGGCAAAGGTaGCTAGATTACAGGTGGTTCGAGGGGCTGGGGCTG +
Preference number: 3 (lower is better)
Translates to: AQSSILGRCWQR*LDYRWFEGLGL
Trigger: CAGCCCCAGCCCCTCGAACCACCTGTAATCTAGGCACCTTTGCCAACACCTCCCAAGGATGGAGGACTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CCA 72 bp CAGTCCCTCGCCCAGTCCTCCATCCTTGGGAGGTGTTaGCAAAGGTGCCTAGATTACAGGTGGTTCGAGGGG +
Preference number: 3 (lower is better)
Translates to: QSLAQSSILGRC*QRCLDYRWFEG
Trigger: CCCCTCGAACCACCTGTAATCTAGGCACCTTTGCCAACACCTCCCAAGGATGGAGGACTGGGCGAGGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CCA 72 bp CTTGGGAGGTGTTGGCAAAGGTGCCTAGATTACAGGTaGTTCGAGGGGCTGGGGCTGGAGCTCAGAAAGGAG +
Preference number: 3 (lower is better)
Translates to: LGRCWQRCLDYR*FEGLGLELRKE
Trigger: CTCCTTTCTGAGCTCCAGCCCCAGCCCCTCGAACCACCTGTAATCTAGGCACCTTTGCCAACACCTCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CCA 72 bp GCCTCTTTCCCAGTCCCTCGCCCAGTCCTCCATCCTTaGGAGGTGTTGGCAAAGGTGCCTAGATTACAGGTG +
Preference number: 3 (lower is better)
Translates to: ASFPVPRPVLHP*EVLAKVPRLQV
Trigger: CACCTGTAATCTAGGCACCTTTGCCAACACCTCCCAAGGATGGAGGACTGGGCGAGGGACTGGGAAAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CCA 72 bp AAACATCCCTGCTCCCTGGGAACCCAGCACCCCCTTTaGTCCCTCTTGTCAGCAGCCTTGGACCACTTTCTC +
Preference number: 3 (lower is better)
Translates to: KHPCSLGTQHPL*SLLSAALDHFL
Trigger: GAGAAAGTGGTCCAAGGCTGCTGACAAGAGGGACCAAAGGGGGTGCTGGGTTCCCAGGGAGCAGGGATGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CCA 72 bp TCTGGGGAGTTCAGCTCCCTCCTTACACTTTCCTGGTaGGCTGCTCCTGCCTGTATGGCACCCACATCAGTC +
Preference number: 3 (lower is better)
Translates to: SGEFSSLLTLSW*AAPACMAPTSV
Trigger: GACTGATGTGGGTGCCATACAGGCAGGAGCAGCCCACCAGGAAAGTGTAAGGAGGGAGCTGAACTCCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CCA 72 bp CCTCCCCATTCTGTATGGGTCAGGCTTCCCCAGTTCTaGGGCTCTCTTGGGCTAGGGAGGGAGTTTAGGACA +
Preference number: 3 (lower is better)
Translates to: PPHSVWVRLPQF*GSLGLGREFRT
Trigger: TGTCCTAAACTCCCTCCCTAGCCCAAGAGAGCCCCAGAACTGGGGAAGCCTGACCCATACAGAATGGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR CAA 90 bp TCAGGGCCTGGGCCAAGGGAGGCCCATCTTGTGAGATGGGAGTCTACCCTCTTGCTCTTGTCAGCAGCCTaGGACCACTTTCTCCCTAAA +
Preference number: 3 (lower is better)
Translates to: SGPGPREAHLVRWESTLLLLSAA*DHFLPK
Trigger: TTTAGGGAGAAAGTGGTCCAAGGCTGCTGACAAGAG...CAAGAGGGTAGACTCCCATCTCACAAGATGGGCCTCCCTTGGCCCAGGCCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR GCA 72 bp GCTTGGATCTCCCTCCTGGAGAATCTGACTGCAGTGTaGTCCACTTTGGGTGTAGGTAAGGGTGGGGGAAGG +
Preference number: 3 (lower is better)
Translates to: AWISLLENLTAV*STLGVGKGGGR
Trigger: CCTTCCCCCACCCTTACCTACACCCAAAGTGGAGCACACTGCAGTCAGATTCTCCAGGAGGGAGATCCAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR CAA 90 bp TCATTAATGTCTCTCCTGCCTAGAGTGCCCTCCCCATTCTGTATGGGTCAGGCTCTACTAAGGAGGGGCTaGAGGCCCCTGAGGCTTGAG +
Preference number: 3 (lower is better)
Translates to: SLMSLLPRVPSPFCMGQALLRRG*RPLRLE
Trigger: CTCAAGCCTCAGGGGCCTCAAGCCCCTCCTTAGTAG...AGCCTGACCCATACAGAATGGGGAGGGCACTCTAGGCAGGAGAGACATTAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CCA 72 bp TGTATGGCACCCACATCAGTCCTAGTGGGGCTGGAGTaGATTTCCATCCTCAGGAAGAAGAGTTGGGGGCTG +
Preference number: 3 (lower is better)
Translates to: CMAPTSVLVGLE*ISILRKKSWGL
Trigger: CAGCCCCCAACTCTTCTTCCTGAGGATGGAAATCCACTCCAGCCCCACTAGGACTGATGTGGGTGCCATACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CCA 72 bp TCAGCTCTGACCCAAGTCTCTGTGGTCCAGCTACTCTaGGGAGTTCAGCTCCCTCCTTACACTTTCCTGGTG +
Preference number: 3 (lower is better)
Translates to: SALTQVSVVQLL*GVQLPPYTFLV
Trigger: CACCAGGAAAGTGTAAGGAGGGAGCTGAACTCCCCAGAGTAGCTGGACCACAGAGACTTGGGTCAGAGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR CAA 90 bp ATGTCTCTCCTGCCTAGAGTGCCCTCCCCATTCTGTATGGGTCAGGCTTCCCCACATCCTTGGGAGGTGTaGGCAAAGGTGCCTAGATTA +
Preference number: 3 (lower is better)
Translates to: MSLLPRVPSPFCMGQASPHPWEV*AKVPRL
Trigger: TAATCTAGGCACCTTTGCCAACACCTCCCAAGGATG...TGGGGAAGCCTGACCCATACAGAATGGGGAGGGCACTCTAGGCAGGAGAGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR CAA 90 bp CCTGCCTGTATGGCACCCACATCAGTCCTAGTGGGGCTGGAGTGGATTTCCATCCTAAACATCCAGGCCTaGCTAAAGGACTTGGAAGGG +
Preference number: 3 (lower is better)
Translates to: PACMAPTSVLVGLEWISILNIQA*LKDLEG
Trigger: CCCTTCCAAGTCCTTTAGCAAGGCCTGGATGTTTAG...GATGGAAATCCACTCCAGCCCCACTAGGACTGATGTGGGTGCCATACAGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR CAA 90 bp CCTGCCTGTATGGCACCCACATCAGTCCTAGTGGGGCTGGAGTGGATTTCCATCATGCACAAGAACCATTaGGGAGGTCTGGACATGGTG +
Preference number: 3 (lower is better)
Translates to: PACMAPTSVLVGLEWISIMHKNH*GGLDMV
Trigger: CACCATGTCCAGACCTCCCAAATGGTTCTTGTGCAT...GATGGAAATCCACTCCAGCCCCACTAGGACTGATGTGGGTGCCATACAGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR TCA 72 bp CCCCATGACATCCCTCCCTCTAAATTTGGTCAAAGCTaGCCAAAGTCCCAGCTGCATACAGTGGCCCCTAGG +
Preference number: 3 (lower is better)
Translates to: PHDIPPSKFGQS*PKSQLHTVAPR
Trigger: CCTAGGGGCCACTGTATGCAGCTGGGACTTTGGTCAGCTTTGACCAAATTTAGAGGGAGGGATGTCATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR GCA 72 bp CCTCTAAATTTGGTCAAAGCTGACCAAAGTCCCAGCTaGATACAGTGGCCCCTAGGAAGGGCTCCCATCCCA +
Preference number: 3 (lower is better)
Translates to: PLNLVKADQSPS*IQWPLGRAPIP
Trigger: TGGGATGGGAGCCCTTCCTAGGGGCCACTGTATGCAGCTGGGACTTTGGTCAGCTTTGACCAAATTTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR CAA 90 bp TTTGGGAAGGAGACTGAGACGGGGTTGAGATGGGGCTACAGGCTTTGTGAGGAGTCCAAGATCCATCTCTaGACCACTCGACTTCCTACC +
Preference number: 3 (lower is better)
Translates to: FGKETETGLRWGYRLCEESKIHL*TTRLPT
Trigger: GGTAGGAAGTCGAGTGGTCAAGAGATGGATCTTGGA...CTCCTCACAAAGCCTGTAGCCCCATCTCAACCCCGTCTCAGTCTCCTTCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR CAA 90 bp CATCAGTTTCCCTCACATTTGATCCTCAATTCCCAGTCCCCATTCTCCATGGTGGCCTTGCTAAAGGACTaGGAAGGGGAGGGTGCATGG +
Preference number: 3 (lower is better)
Translates to: HQFPSHLILNSQSPFSMVALLKD*EGEGAW
Trigger: CCATGCACCCTCCCCTTCCAAGTCCTTTAGCAAGGC...CACCATGGAGAATGGGGACTGGGAATTGAGGATCAAATGTGAGGGAAACTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CCA 72 bp GATCCTGAAGGCAGCGTGAGAGAATGTGACCAAGTGTaGGTCTCTTCAGTTCGAGGAGTTCAGCTCACATCT +
Preference number: 3 (lower is better)
Translates to: DPEGSVRECDQV*VSSVRGVQLTS
Trigger: AGATGTGAGCTGAACTCCTCGAACTGAAGAGACCCACACTTGGTCACATTCTCTCACGCTGCCTTCAGGATC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CCA 72 bp AGGTCAGATAGGAATGGACTCAAGTCCACAGTGCCTTaGAGTTTGTACCGCTATCGGTTACCAAGGCCCCAA +
Preference number: 3 (lower is better)
Translates to: RSDRNGLKSTVP*SLYRYRLPRPQ
Trigger: TTGGGGCCTTGGTAACCGATAGCGGTACAAACTCCAAGGCACTGTGGACTTGAGTCCATTCCTATCTGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR TCA 72 bp GGGGCATTTCCTAACCTCATCAGTTTCCCTCACATTTaGTCCTCAATTCCCAGTCCCCATTCTCCATGGTGG +
Preference number: 3 (lower is better)
Translates to: GAFPNLISFPHI*SSIPSPHSPWW
Trigger: CCACCATGGAGAATGGGGACTGGGAATTGAGGATCAAATGTGAGGGAAACTGATGAGGTTAGGAAATGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR CAA 90 bp CTAACCTCATCAGTTTCCCTCACATTTGATCCTCAATTCCCAGTCCCCATTCTCCAAGTCCACAGTGCCTaGGAGTTTGTACCGCTATCG +
Preference number: 3 (lower is better)
Translates to: LTSSVSLTFDPQFPVPILQVHSA*EFVPLS
Trigger: CGATAGCGGTACAAACTCCAAGGCACTGTGGACTTG...GAGAATGGGGACTGGGAATTGAGGATCAAATGTGAGGGAAACTGATGAGGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR GCA 72 bp AAAAGAGGTCAGATAGGAATGGACTCAAGTCCACAGTaGCTTGGAGTTTGTACCGCTATCGGTTACCAAGGC +
Preference number: 3 (lower is better)
Translates to: KRGQIGMDSSPQ*LGVCTAIGYQG
Trigger: GCCTTGGTAACCGATAGCGGTACAAACTCCAAGGCACTGTGGACTTGAGTCCATTCCTATCTGACCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR-3UTR CAA 90 bp CATCAGTTTCCCTCACATTTGATCCTCAATTCCCAGTCCCCATTCTCCATGGTGGGCACATACTCTAGTTaGTCTCCTCTCAACTGTGGT +
Preference number: 3 (lower is better)
Translates to: HQFPSHLILNSQSPFSMVGTYSS*SPLNCG
Trigger: ACCACAGTTGAGAGGAGACAAACTAGAGTATGTGCC...CACCATGGAGAATGGGGACTGGGAATTGAGGATCAAATGTGAGGGAAACTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR GCA 72 bp TCTCAACTGTGGTGTGTGTGTGTGTGTGTGTATGCATaGACGTGCTGTATCTGTCCCCATATACAGGCATTT +
Preference number: 3 (lower is better)
Translates to: SQLWCVCVCVYA*TCCICPHIQAF
Trigger: AAATGCCTGTATATGGGGACAGATACAGCACGTGCATGCATACACACACACACACACACACCACAGTTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR GCA 90 bp TCAGGGCCTGGGCCAAGGGAGGCCCATCTTGTGAGATGGGAGTCTACCCTCTTGCCGGGGCACCTCCTGTaGCCCAGCAGGGGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: SGPGPREAHLVRWESTLLPGHLL*PSRGRE
Trigger: CTCACGCCCCCTGCTGGGGCACAGGAGGTGCCCCGG...CAAGAGGGTAGACTCCCATCTCACAAGATGGGCCTCCCTTGGCCCAGGCCCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR GCA 90 bp CATCCAGGCCTTGCTAAAGGACTTGGAAGGGGAGGGTGCATGGGAGCAGAGGGGCGCCGGCTGGCTGCATaGCCATTCTGCCGGATACCC +
Preference number: 4 (lower is better)
Translates to: HPGLAKGLGRGGCMGAEGRRLAA*PFCRIP
Trigger: GGGTATCCGGCAGAATGGGCATGCAGCCAGCCGGCG...CCCCTCTGCTCCCATGCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR GCA 90 bp TTTGGGAAGGAGACTGAGACGGGGTTGAGATGGGGCTACAGGCTTTGTGAGGAGGCCCCAGCCCTCCCGTaGTCAGGGCCTGGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: FGKETETGLRWGYRLCEEAPALP*SGPGPR
Trigger: CCTTGGCCCAGGCCCTGAGCACGGGAGGGCTGGGGC...CTCCTCACAAAGCCTGTAGCCCCATCTCAACCCCGTCTCAGTCTCCTTCCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR GCA 90 bp ATGTCTCTCCTGCCTAGAGTGCCCTCCCCATTCTGTATGGGTCAGGCTTCCCCACCCCCTCCGTCTGCCTaGTGGCCGCCGCCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: MSLLPRVPSPFCMGQASPPPPSA*WPPPFV
Trigger: GACAAAAGGCGGCGGCCAGCAGGCAGACGGAGGGGG...TGGGGAAGCCTGACCCATACAGAATGGGGAGGGCACTCTAGGCAGGAGAGACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp TCCCTCGCCCAGTCCTCCATCCTTGGGAGGTGTTGGCAAAGGTGCCTAGATTACAGCCGGCGATCCAGTTaGCAGCAGCCTGGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: SLAQSSILGRCWQRCLDYSRRSS*QQPGRW
Trigger: CCACCGGCCAGGCTGCTGCCAACTGGATCGCCGGCT...GTAATCTAGGCACCTTTGCCAACACCTCCCAAGGATGGAGGACTGGGCGAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp CAGGCCTTGCTAAAGGACTTGGAAGGGGAGGGTGCATGGGAGCAGAGGGGGCAAACCCAGCAGGGTTGGTaGCATGGGCCCACGGCCAAA +
Preference number: 4 (lower is better)
Translates to: QALLKDLEGEGAWEQRGQTQQGW*HGPTAK
Trigger: TTTGGCCGTGGGCCCATGCCACCAACCCTGCTGGGT...TTGCCCCCTCTGCTCCCATGCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp CACCCCTGGGAGGAGGCTTGGATCTCCCTCCTGGAGAATCTGACTGCAGTGTGCCCCCTCCCTTGCTGTTaGCCCCATCACGGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: HPWEEAWISLLENLTAVCPLPCC*PHHGGH
Trigger: ATGGCCACCGTGATGGGGCCAACAGCAAGGGAGGGG...GCACACTGCAGTCAGATTCTCCAGGAGGGAGATCCAAGCCTCCTCCCAGGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR GCA 90 bp CATCCAGGCCTTGCTAAAGGACTTGGAAGGGGAGGGTGCATGGGAGCAGAGGGGGTCAGACAGGGCACATaGACGCACGCACGCACACAC +
Preference number: 4 (lower is better)
Translates to: HPGLAKGLGRGGCMGAEGVRQGT*THARTH
Trigger: GTGTGTGCGTGCGTGCGTGCATGTGCCCTGTCTGAC...CCCCTCTGCTCCCATGCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTGGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp TCCCTCGCCCAGTCCTCCATCCTTGGGAGGTGTTGGCAAAGGTGCCTAGATTACGGGTGTCCAACTAGCTaGCAGGTGGGGGTCCCGGCA +
Preference number: 4 (lower is better)
Translates to: SLAQSSILGRCWQRCLDYGCPTS*QVGVPA
Trigger: TGCCGGGACCCCCACCTGCCAGCTAGTTGGACACCC...GTAATCTAGGCACCTTTGCCAACACCTCCCAAGGATGGAGGACTGGGCGAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp TCAGGGCCTGGGCCAAGGGAGGCCCATCTTGTGAGATGGGAGTCTACCCTCTTGTTGGGGAACACCAGGTaGGCAGCACACAGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SGPGPREAHLVRWESTLLLGNTR*AAHSLG
Trigger: CCCAAGGCTGTGTGCTGCCCACCTGGTGTTCCCCAA...CAAGAGGGTAGACTCCCATCTCACAAGATGGGCCTCCCTTGGCCCAGGCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp ATGTCTCTCCTGCCTAGAGTGCCCTCCCCATTCTGTATGGGTCAGGCTTCCCCACCAGTAGCCGCCGGCTaGCTGCATGCCCATTCTGCC +
Preference number: 4 (lower is better)
Translates to: MSLLPRVPSPFCMGQASPPVAAG*LHAHSA
Trigger: GGCAGAATGGGCATGCAGCCAGCCGGCGGCTACTGG...TGGGGAAGCCTGACCCATACAGAATGGGGAGGGCACTCTAGGCAGGAGAGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp CAGGCCTTGCTAAAGGACTTGGAAGGGGAGGGTGCATGGGAGCAGAGGGGGCAAGGGGGACAGAGAGCCTaGGTAAGACCAGGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: QALLKDLEGEGAWEQRGQGGQRA*VRPGQG
Trigger: TCCTTGCCCTGGTCTTACCCAGGCTCTCTGTCCCCC...TTGCCCCCTCTGCTCCCATGCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp TCCTGCCTAGAGTGCCCTCCCCATTCTGTATGGGTCAGGCTTCCCCAGTTCTGGCCCAGCTGCATACAGTaGCCCCTAGGAAGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SCLECPPHSVWVRLPQFWPSCIQ*PLGRAP
Trigger: GGGAGCCCTTCCTAGGGGCCACTGTATGCAGCTGGG...CCAGAACTGGGGAAGCCTGACCCATACAGAATGGGGAGGGCACTCTAGGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp CACTTTCTCCCTAAACATCCAGGCCTTGCTAAAGGACTTGGAAGGGGAGGGTGCCGGGCCTGGCGGGGATaGGGAAGAGGTGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: HFLPKHPGLAKGLGRGGCRAWRG*GRGAGP
Trigger: TGGACCTGCACCTCTTCCCCATCCCCGCCAGGCCCG...GCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTGGATGTTTAGGGAGAAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp TCATTAATGTCTCTCCTGCCTAGAGTGCCCTCCCCATTCTGTATGGGTCAGGCTACCCGTCTGCCTGCCTaGCTGCCGGTCCCCCTACCC +
Preference number: 4 (lower is better)
Translates to: SLMSLLPRVPSPFCMGQATRLPA*LPVPLP
Trigger: GGGTAGGGGGACCGGCAGCCAGGCAGGCAGACGGGT...AGCCTGACCCATACAGAATGGGGAGGGCACTCTAGGCAGGAGAGACATTAATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp TCCTGCCTAGAGTGCCCTCCCCATTCTGTATGGGTCAGGCTTCCCCAGTTCTGGGGCAGCACACAGCCTTaGGGTGTCCAACTAGCTGGC +
Preference number: 4 (lower is better)
Translates to: SCLECPPHSVWVRLPQFWGSTQP*GVQLAG
Trigger: GCCAGCTAGTTGGACACCCCAAGGCTGTGTGCTGCC...CCAGAACTGGGGAAGCCTGACCCATACAGAATGGGGAGGGCACTCTAGGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp CCTGCCTGTATGGCACCCACATCAGTCCTAGTGGGGCTGGAGTGGATTTCCATCCACAGTAGGGTTCTCTaGGAGCCGGGGCACCTCCTG +
Preference number: 4 (lower is better)
Translates to: PACMAPTSVLVGLEWISIHSRVL*EPGHLL
Trigger: CAGGAGGTGCCCCGGCTCCCAGAGAACCCTACTGTG...GATGGAAATCCACTCCAGCCCCACTAGGACTGATGTGGGTGCCATACAGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp CCCCACAAAACTAAATATGCCTCTTTCCCAGTCCCTCGCCCAGTCCTCCATCCTCCCGTGCTCAGGGCCTaGGCCAAGGGAGGCCCATCT +
Preference number: 4 (lower is better)
Translates to: PHKTKYASFPVPRPVLHPPVLRA*AKGGPS
Trigger: AGATGGGCCTCCCTTGGCCCAGGCCCTGAGCACGGG...AGGATGGAGGACTGGGCGAGGGACTGGGAAAGAGGCATATTTAGTTTTGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CAA 72 bp CCAGTCCCTCGCCCAGTCCTCCATCCTTGGGAGGTGTaGGCAAAGGTGCCTAGATTACAGGTGGTTCGAGGG +
Preference number: 4 (lower is better)
Translates to: PVPRPVLHPWEV*AKVPRLQVVRG
Trigger: CCCTCGAACCACCTGTAATCTAGGCACCTTTGCCAACACCTCCCAAGGATGGAGGACTGGGCGAGGGACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR TCA 90 bp TCCCTCGCCCAGTCCTCCATCCTTGGGAGGTGTTGGCAAAGGTGCCTAGATTACAGCAGACAATTGGGTTaGCGGCAGCCTGGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: SLAQSSILGRCWQRCLDYSRQLG*RQPGRS
Trigger: GCTTCGCCCAGGCTGCCGTCAACCCAATTGTCTGCT...GTAATCTAGGCACCTTTGCCAACACCTCCCAAGGATGGAGGACTGGGCGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR TCA 90 bp CACCCCTGGGAGGAGGCTTGGATCTCCCTCCTGGAGAATCTGACTGCAGTGTGCCCAGCCTGCTTCACATaGCACAGTAGGGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: HPWEEAWISLLENLTAVCPACFT*HSRVLW
Trigger: CCAGAGAACCCTACTGTGTCATGTGAAGCAGGCTGG...GCACACTGCAGTCAGATTCTCCAGGAGGGAGATCCAAGCCTCCTCCCAGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR GCA 90 bp TCATTAATGTCTCTCCTGCCTAGAGTGCCCTCCCCATTCTGTATGGGTCAGGCTTCCCCGCGGGGCCTCTaGCAAGCCTCCAGCAGATGC +
Preference number: 4 (lower is better)
Translates to: SLMSLLPRVPSPFCMGQASPRGL*QASSRC
Trigger: GCATCTGCTGGAGGCTTGGCAGAGGCCCCGCGGGGA...AGCCTGACCCATACAGAATGGGGAGGGCACTCTAGGCAGGAGAGACATTAATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR GCA 90 bp CCTGCCTGTATGGCACCCACATCAGTCCTAGTGGGGCTGGAGTGGATTTCCATCAGACGGCAGAGCGTATaGCATCGGCCAGGCACAGGT +
Preference number: 4 (lower is better)
Translates to: PACMAPTSVLVGLEWISIRRQSV*HRPGTG
Trigger: ACCTGTGCCTGGCCGATGGCATACGCTCTGCCGTCT...GATGGAAATCCACTCCAGCCCCACTAGGACTGATGTGGGTGCCATACAGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR GCA 90 bp CATCCAGGCCTTGCTAAAGGACTTGGAAGGGGAGGGTGCATGGGAGCAGAGGGGGACCAAAGTCCCAGCTaGATACAGTGGCCCCTAGGA +
Preference number: 4 (lower is better)
Translates to: HPGLAKGLGRGGCMGAEGDQSPS*IQWPLG
Trigger: TCCTAGGGGCCACTGTATGCAGCTGGGACTTTGGTC...CCCCTCTGCTCCCATGCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTGGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp CCCCACAAAACTAAATATGCCTCTTTCCCAGTCCCTCGCCCAGTCCTCCATCCTACCGGAGGGGTGCACTaGGTAGGGCTGGGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: PHKTKYASFPVPRPVLHPTGGVH*VGLGVL
Trigger: CAACACCCCCAGCCCTACCCAGTGCACCCCTCCGGT...AGGATGGAGGACTGGGCGAGGGACTGGGAAAGAGGCATATTTAGTTTTGTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp CACCCCTGGGAGGAGGCTTGGATCTCCCTCCTGGAGAATCTGACTGCAGTGTGCAGCATGAAGGCCGCATaGAAGCAAAAGAGCACGGCC +
Preference number: 4 (lower is better)
Translates to: HPWEEAWISLLENLTAVCSMKAA*KQKSTA
Trigger: GGCCGTGCTCTTTTGCTTCCATGCGGCCTTCATGCT...GCACACTGCAGTCAGATTCTCCAGGAGGGAGATCCAAGCCTCCTCCCAGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp TCCTGCCTAGAGTGCCCTCCCCATTCTGTATGGGTCAGGCTTCCCCAGTTCTGGGGGTTGACGGCAGCCTaGGCGAAGCTCATCCAAACA +
Preference number: 4 (lower is better)
Translates to: SCLECPPHSVWVRLPQFWGLTAA*AKLIQT
Trigger: TGTTTGGATGAGCTTCGCCCAGGCTGCCGTCAACCC...CCAGAACTGGGGAAGCCTGACCCATACAGAATGGGGAGGGCACTCTAGGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp CACCCCTGGGAGGAGGCTTGGATCTCCCTCCTGGAGAATCTGACTGCAGTGTGCCCTCCCCATTCTGTATaGGTCAGGCTTCCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: HPWEEAWISLLENLTAVCPPHSV*VRLPQF
Trigger: GAACTGGGGAAGCCTGACCCATACAGAATGGGGAGG...GCACACTGCAGTCAGATTCTCCAGGAGGGAGATCCAAGCCTCCTCCCAGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR GCA 90 bp ATGTCTCTCCTGCCTAGAGTGCCCTCCCCATTCTGTATGGGTCAGGCTTCCCCAGCTGCATGCCCATTCTaGCGGATACCCAGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: MSLLPRVPSPFCMGQASPAACPF*RIPSRV
Trigger: AACCCTGCTGGGTATCCGGCAGAATGGGCATGCAGC...TGGGGAAGCCTGACCCATACAGAATGGGGAGGGCACTCTAGGCAGGAGAGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR GCA 90 bp CACCCCTGGGAGGAGGCTTGGATCTCCCTCCTGGAGAATCTGACTGCAGTGTGCTTCTCTCTGCCTGTCTaGCTACCAGCCTGCTTCACA +
Preference number: 4 (lower is better)
Translates to: HPWEEAWISLLENLTAVCFSLPV*LPACFT
Trigger: TGTGAAGCAGGCTGGTAGGCAGACAGGCAGAGAGAA...GCACACTGCAGTCAGATTCTCCAGGAGGGAGATCCAAGCCTCCTCCCAGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR GCA 90 bp TCCCTCGCCCAGTCCTCCATCCTTGGGAGGTGTTGGCAAAGGTGCCTAGATTACGACCAGGGCAAGGAGTaGCAGCTTGGCTCACCAATC +
Preference number: 4 (lower is better)
Translates to: SLAQSSILGRCWQRCLDYDQGKE*QLGSPI
Trigger: GATTGGTGAGCCAAGCTGGCACTCCTTGCCCTGGTC...GTAATCTAGGCACCTTTGCCAACACCTCCCAAGGATGGAGGACTGGGCGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp CACCCCTGGGAGGAGGCTTGGATCTCCCTCCTGGAGAATCTGACTGCAGTGTGCTGGATACAGCCGGGCTaGTCTAAATCGCAGGCATCA +
Preference number: 4 (lower is better)
Translates to: HPWEEAWISLLENLTAVCWIQPG*SKSQAS
Trigger: TGATGCCTGCGATTTAGACCAGCCCGGCTGTATCCA...GCACACTGCAGTCAGATTCTCCAGGAGGGAGATCCAAGCCTCCTCCCAGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp TTTGGGAAGGAGACTGAGACGGGGTTGAGATGGGGCTACAGGCTTTGTGAGGAGCCAGCAGGGACAAGATaGCGTTACCCGCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: FGKETETGLRWGYRLCEEPAGTR*RYPPGS
Trigger: TGAGCCTGGCGGGTAACGCCATCTTGTCCCTGCTGG...CTCCTCACAAAGCCTGTAGCCCCATCTCAACCCCGTCTCAGTCTCCTTCCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp ATCCATCTCTTGACCACTCGACTTCCTACCACGGGCACATACTCTAGTTTGTCTCAGTTGGCAGCAGCCTaGCCGGTGGCCCCGGGACCA +
Preference number: 4 (lower is better)
Translates to: IHLLTTRLPTTGTYSSLSQLAAA*PVAPGP
Trigger: TGGTCCCGGGGCCACCGGCCAGGCTGCTGCCAACTG...AGACAAACTAGAGTATGTGCCCGTGGTAGGAAGTCGAGTGGTCAAGAGATGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp TCCCTCGCCCAGTCCTCCATCCTTGGGAGGTGTTGGCAAAGGTGCCTAGATTACTCATCCAAACAGCAGTaGCCAGGTAGCGGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: SLAQSSILGRCWQRCLDYSSKQQ*PGSGGA
Trigger: TGCCCCACCGCTACCTGGCCACTGCTGTTTGGATGA...GTAATCTAGGCACCTTTGCCAACACCTCCCAAGGATGGAGGACTGGGCGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp TCCCTCGCCCAGTCCTCCATCCTTGGGAGGTGTTGGCAAAGGTGCCTAGATTACTGCCTAGATTACAGGTaGTTCGAGGGGCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SLAQSSILGRCWQRCLDYCLDYR*FEGLGL
Trigger: CAGCCCCAGCCCCTCGAACCACCTGTAATCTAGGCA...GTAATCTAGGCACCTTTGCCAACACCTCCCAAGGATGGAGGACTGGGCGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp CATCCAGGCCTTGCTAAAGGACTTGGAAGGGGAGGGTGCATGGGAGCAGAGGGGCTAGTGGGGCTGGAGTaGATTTCCATCCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: HPGLAKGLGRGGCMGAEGLVGLE*ISILRK
Trigger: CTTCCTGAGGATGGAAATCCACTCCAGCCCCACTAG...CCCCTCTGCTCCCATGCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp TCCTGCCTAGAGTGCCCTCCCCATTCTGTATGGGTCAGGCTTCCCCAGTTCTGGCTCCTTACACTTTCCTaGTGGGCTGCTCCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: SCLECPPHSVWVRLPQFWLLTLS*WAAPAC
Trigger: ACAGGCAGGAGCAGCCCACCAGGAAAGTGTAAGGAG...CCAGAACTGGGGAAGCCTGACCCATACAGAATGGGGAGGGCACTCTAGGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp CCTGCCTGTATGGCACCCACATCAGTCCTAGTGGGGCTGGAGTGGATTTCCATCGTGGTCCAGCTACTCTaGGGAGTTCAGCTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: PACMAPTSVLVGLEWISIVVQLL*GVQLPP
Trigger: AGGAGGGAGCTGAACTCCCCAGAGTAGCTGGACCAC...GATGGAAATCCACTCCAGCCCCACTAGGACTGATGTGGGTGCCATACAGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp CACTTTCTCCCTAAACATCCAGGCCTTGCTAAAGGACTTGGAAGGGGAGGGTGCGGTTTTCAAGTTCCCTaGCGGCCCCAGCCCTCCCGT +
Preference number: 4 (lower is better)
Translates to: HFLPKHPGLAKGLGRGGCGFQVP*RPQPSR
Trigger: ACGGGAGGGCTGGGGCCGCCAGGGAACTTGAAAACC...GCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTGGATGTTTAGGGAGAAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR TCA 90 bp TTTGGGAAGGAGACTGAGACGGGGTTGAGATGGGGCTACAGGCTTTGTGAGGAGCCCCATCACTATCGCTaGGAGAACAGGCTCCCCTAC +
Preference number: 4 (lower is better)
Translates to: FGKETETGLRWGYRLCEEPHHYR*ENRLPY
Trigger: GTAGGGGAGCCTGTTCTCTCAGCGATAGTGATGGGG...CTCCTCACAAAGCCTGTAGCCCCATCTCAACCCCGTCTCAGTCTCCTTCCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR GCA 90 bp CACCCCTGGGAGGAGGCTTGGATCTCCCTCCTGGAGAATCTGACTGCAGTGTGCGTTGTCCTGCTACATTaGACCTTGGCTCTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: HPWEEAWISLLENLTAVCVVLLH*TLALSA
Trigger: TGCTGAGAGAGCCAAGGTGCAATGTAGCAGGACAAC...GCACACTGCAGTCAGATTCTCCAGGAGGGAGATCCAAGCCTCCTCCCAGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR GCA 90 bp TCAGGGCCTGGGCCAAGGGAGGCCCATCTTGTGAGATGGGAGTCTACCCTCTTGCTCCATGAGTTGTCCTaGTACATTGCACCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: SGPGPREAHLVRWESTLLLHELS*YIAPWL
Trigger: GAGCCAAGGTGCAATGTAGCAGGACAACTCATGGAG...CAAGAGGGTAGACTCCCATCTCACAAGATGGGCCTCCCTTGGCCCAGGCCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp CTAACCTCATCAGTTTCCCTCACATTTGATCCTCAATTCCCAGTCCCCATTCTCTCCGGGGCTCCTCCCTaGGAGCACACGGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: LTSSVSLTFDPQFPVPILSGAPP*EHTGHG
Trigger: GCCATGGCCCGTGTGCTCCCAGGGAGGAGCCCCGGA...GAGAATGGGGACTGGGAATTGAGGATCAAATGTGAGGGAAACTGATGAGGTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp TTGGTCAAAGCTGACCAAAGTCCCAGCTGCATACAGTGGCCCCTAGGAAGGGCTCTGCTTCTGTTGCCGTaGATACAGCCGGGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: LVKADQSPSCIQWPLGRALLLLP*IQPGWS
Trigger: AGACCAGCCCGGCTGTATCCACGGCAACAGAAGCAG...AGCCCTTCCTAGGGGCCACTGTATGCAGCTGGGACTTTGGTCAGCTTTGACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp CATCCAGGCCTTGCTAAAGGACTTGGAAGGGGAGGGTGCATGGGAGCAGAGGGGTGCTACATTGCACCTTaGCTCTCTCAGCAGGGATGT +
Preference number: 4 (lower is better)
Translates to: HPGLAKGLGRGGCMGAEGCYIAP*LSQQGC
Trigger: ACATCCCTGCTGAGAGAGCCAAGGTGCAATGTAGCA...CCCCTCTGCTCCCATGCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp ATCCATCTCTTGACCACTCGACTTCCTACCACGGGCACATACTCTAGTTTGTCTGCAGGGTTGGTGGCATaGGCCCACGGCCAAAGCCGG +
Preference number: 4 (lower is better)
Translates to: IHLLTTRLPTTGTYSSLSAGLVA*AHGQSR
Trigger: CCGGCTTTGGCCGTGGGCCCATGCCACCAACCCTGC...AGACAAACTAGAGTATGTGCCCGTGGTAGGAAGTCGAGTGGTCAAGAGATGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp TTGTCAGCAGCCTTGGACCACTTTCTCCCTAAACATCCAGGCCTTGCTAAAGGAGATACCCAGCAGGGTTaGTGGCATGGGCCCACGGCC +
Preference number: 4 (lower is better)
Translates to: LSAALDHFLPKHPGLAKGDTQQG*WHGPTA
Trigger: GGCCGTGGGCCCATGCCACCAACCCTGCTGGGTATC...TCCTTTAGCAAGGCCTGGATGTTTAGGGAGAAAGTGGTCCAAGGCTGCTGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp TTGGTCAAAGCTGACCAAAGTCCCAGCTGCATACAGTGGCCCCTAGGAAGGGCTCAGGAAGCAGACAATTaGGTTGACGGCAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LVKADQSPSCIQWPLGRAQEADN*VDGSLG
Trigger: GCCCAGGCTGCCGTCAACCCAATTGTCTGCTTCCTG...AGCCCTTCCTAGGGGCCACTGTATGCAGCTGGGACTTTGGTCAGCTTTGACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp AGGAACACCTTGTTTGAGTTTGGGAAGGAGACTGAGACGGGGTTGAGATGGGGCAGTGGACTCCACCCCTaGGAGGAGGCTTGGATCTCC +
Preference number: 4 (lower is better)
Translates to: RNTLFEFGKETETGLRWGSGLHP*EEAWIS
Trigger: GGAGATCCAAGCCTCCTCCCAGGGGTGGAGTCCACT...GCCCCATCTCAACCCCGTCTCAGTCTCCTTCCCAAACTCAAACAAGGTGTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp CACTTTCTCCCTAAACATCCAGGCCTTGCTAAAGGACTTGGAAGGGGAGGGTGCAGGCTTCCCCAGTTCTaGGGCTCTCTTGGGCTAGGG +
Preference number: 4 (lower is better)
Translates to: HFLPKHPGLAKGLGRGGCRLPQF*GSLGLG
Trigger: CCCTAGCCCAAGAGAGCCCCAGAACTGGGGAAGCCT...GCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTGGATGTTTAGGGAGAAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp CAGGCCTTGCTAAAGGACTTGGAAGGGGAGGGTGCATGGGAGCAGAGGGGGCAAGCCCATCTTGTGAGATaGGAGTCTACCCTCTTGCTA +
Preference number: 4 (lower is better)
Translates to: QALLKDLEGEGAWEQRGQAHLVR*ESTLLL
Trigger: TAGCAAGAGGGTAGACTCCCATCTCACAAGATGGGC...TTGCCCCCTCTGCTCCCATGCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp TCATTAATGTCTCTCCTGCCTAGAGTGCCCTCCCCATTCTGTATGGGTCAGGCTAGGGAGCAGGCTGGCTaGGTAGACTCCTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SLMSLLPRVPSPFCMGQAREQAG*VDSWAW
Trigger: CCAAGCCCAGGAGTCTACCCAGCCAGCCTGCTCCCT...AGCCTGACCCATACAGAATGGGGAGGGCACTCTAGGCAGGAGAGACATTAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR TCA 90 bp AGGAACACCTTGTTTGAGTTTGGGAAGGAGACTGAGACGGGGTTGAGATGGGGCTGCACTGAAGGTCCATaGAGAGCCGTGGCGCACAGA +
Preference number: 4 (lower is better)
Translates to: RNTLFEFGKETETGLRWGCTEGP*RAVAHR
Trigger: TCTGTGCGCCACGGCTCTTCATGGACCTTCAGTGCA...GCCCCATCTCAACCCCGTCTCAGTCTCCTTCCCAAACTCAAACAAGGTGTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR TCA 90 bp CACTTTCTCCCTAAACATCCAGGCCTTGCTAAAGGACTTGGAAGGGGAGGGTGCGGGAGGCCCATCTTGTaGGATGGGAGTCTACCCTCT +
Preference number: 4 (lower is better)
Translates to: HFLPKHPGLAKGLGRGGCGRPIL*DGSLPS
Trigger: AGAGGGTAGACTCCCATCTCACAAGATGGGCCTCCC...GCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTGGATGTTTAGGGAGAAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR TCA 90 bp TCCTGCCTAGAGTGCCCTCCCCATTCTGTATGGGTCAGGCTTCCCCAGTTCTGGGGCTTTGTGAGGAGATaGGGTTTTCAAGTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: SCLECPPHSVWVRLPQFWGFVRR*GFQVPW
Trigger: CCAGGGAACTTGAAAACCTCATCTCCTCACAAAGCC...CCAGAACTGGGGAAGCCTGACCCATACAGAATGGGGAGGGCACTCTAGGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR TCA 90 bp AGGAACACCTTGTTTGAGTTTGGGAAGGAGACTGAGACGGGGTTGAGATGGGGCGTTTGGGAAGGAGACTaGGACGGGGTTGAGATGGGG +
Preference number: 4 (lower is better)
Translates to: RNTLFEFGKETETGLRWGVWEGD*DGVEMG
Trigger: CCCCATCTCAACCCCGTCTCAGTCTCCTTCCCAAAC...GCCCCATCTCAACCCCGTCTCAGTCTCCTTCCCAAACTCAAACAAGGTGTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR GCA 90 bp ATGTCTCTCCTGCCTAGAGTGCCCTCCCCATTCTGTATGGGTCAGGCTTCCCCAAGCGATGCTCAAAGATaGACTGGTCCTCCTCCCGAA +
Preference number: 4 (lower is better)
Translates to: MSLLPRVPSPFCMGQASPSDAQR*TGPPPE
Trigger: TTCGGGAGGAGGACCAGTGCATCTTTGAGCATCGCT...TGGGGAAGCCTGACCCATACAGAATGGGGAGGGCACTCTAGGCAGGAGAGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR GCA 90 bp TTGGTCAAAGCTGACCAAAGTCCCAGCTGCATACAGTGGCCCCTAGGAAGGGCTAACATGCGGCCCAGCTaGTTTTCACCCTTGACCTCG +
Preference number: 4 (lower is better)
Translates to: LVKADQSPSCIQWPLGRANMRPS*FSPLTS
Trigger: CGAGGTCAAGGGTGAAAAGCAGCTGGGCCGCATGTT...AGCCCTTCCTAGGGGCCACTGTATGCAGCTGGGACTTTGGTCAGCTTTGACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR GCA 90 bp AGGAACACCTTGTTTGAGTTTGGGAAGGAGACTGAGACGGGGTTGAGATGGGGCGTTGGGAAAGAAGGATaGTTGGGGCTCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RNTLFEFGKETETGLRWGVGKEG*LGLRAQ
Trigger: CTGGGCCCTGAGCCCCAAGCATCCTTCTTTCCCAAC...GCCCCATCTCAACCCCGTCTCAGTCTCCTTCCCAAACTCAAACAAGGTGTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR GCA 90 bp TCAGGGCCTGGGCCAAGGGAGGCCCATCTTGTGAGATGGGAGTCTACCCTCTTGAATCTGACTGCAGTGTaGTCCACTTTGGGTGTAGGT +
Preference number: 4 (lower is better)
Translates to: SGPGPREAHLVRWESTLLNLTAV*STLGVG
Trigger: ACCTACACCCAAAGTGGAGCACACTGCAGTCAGATT...CAAGAGGGTAGACTCCCATCTCACAAGATGGGCCTCCCTTGGCCCAGGCCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR GCA 90 bp CAGGCCTTGCTAAAGGACTTGGAAGGGGAGGGTGCATGGGAGCAGAGGGGGCAAGGCATTTTACGTGTGTaGACCGGGCAAGTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: QALLKDLEGEGAWEQRGQGILRV*TGQVFF
Trigger: GAAGAAAACTTGCCCGGTGCACACACGTAAAATGCC...TTGCCCCCTCTGCTCCCATGCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp CTAACCTCATCAGTTTCCCTCACATTTGATCCTCAATTCCCAGTCCCCATTCTCGGAGCACACGGGCCATaGCCTGGGAGAGCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LTSSVSLTFDPQFPVPILGAHGP*PGRAPG
Trigger: ACCTGGGGCTCTCCCAGGCCATGGCCCGTGTGCTCC...GAGAATGGGGACTGGGAATTGAGGATCAAATGTGAGGGAAACTGATGAGGTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp ATCCATCTCTTGACCACTCGACTTCCTACCACGGGCACATACTCTAGTTTGTCTCCTCCGTCTGCCTGCTaGCCGCCGCCTTTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: IHLLTTRLPTTGTYSSLSPPSAC*PPPFVL
Trigger: GAGGACAAAAGGCGGCGGCCAGCAGGCAGACGGAGG...AGACAAACTAGAGTATGTGCCCGTGGTAGGAAGTCGAGTGGTCAAGAGATGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp ATGTCTCTCCTGCCTAGAGTGCCCTCCCCATTCTGTATGGGTCAGGCTTCCCCATCAGCAGGGATGTCTTaGAATCCACGATGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: MSLLPRVPSPFCMGQASPSAGMS*NPRWGS
Trigger: TGAGCCCCATCGTGGATTCCAAGACATCCCTGCTGA...TGGGGAAGCCTGACCCATACAGAATGGGGAGGGCACTCTAGGCAGGAGAGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp CATCCAGGCCTTGCTAAAGGACTTGGAAGGGGAGGGTGCATGGGAGCAGAGGGGATCCTTGGGAGGTGTTaGCAAAGGTGCCTAGATTAC +
Preference number: 4 (lower is better)
Translates to: HPGLAKGLGRGGCMGAEGILGRC*QRCLDY
Trigger: GTAATCTAGGCACCTTTGCCAACACCTCCCAAGGAT...CCCCTCTGCTCCCATGCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp CATCCAGGCCTTGCTAAAGGACTTGGAAGGGGAGGGTGCATGGGAGCAGAGGGGGAATGTGACCAAGTGTaGGTCTCTTCAGTTCGAGGA +
Preference number: 4 (lower is better)
Translates to: HPGLAKGLGRGGCMGAEGECDQV*VSSVRG
Trigger: TCCTCGAACTGAAGAGACCCACACTTGGTCACATTC...CCCCTCTGCTCCCATGCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTGGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp CCCCACAAAACTAAATATGCCTCTTTCCCAGTCCCTCGCCCAGTCCTCCATCCTGGAAAGAAGGATGCTTaGGGCTCAGGGCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: PHKTKYASFPVPRPVLHPGKKDA*GSGPSQ
Trigger: CTGACTGGGCCCTGAGCCCCAAGCATCCTTCTTTCC...AGGATGGAGGACTGGGCGAGGGACTGGGAAAGAGGCATATTTAGTTTTGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp CATCCAGGCCTTGCTAAAGGACTTGGAAGGGGAGGGTGCATGGGAGCAGAGGGGGAAGGGAAAGGGGGATaGATAAATACAGATTCCGGC +
Preference number: 4 (lower is better)
Translates to: HPGLAKGLGRGGCMGAEGEGKGG*INTDSG
Trigger: GCCGGAATCTGTATTTATCCATCCCCCTTTCCCTTC...CCCCTCTGCTCCCATGCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTGGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp CATCCAGGCCTTGCTAAAGGACTTGGAAGGGGAGGGTGCATGGGAGCAGAGGGGCCCCATTCTCCATGGTaGTCCAATTTTAGGAACACC +
Preference number: 4 (lower is better)
Translates to: HPGLAKGLGRGGCMGAEGPHSPW*SNFRNT
Trigger: GGTGTTCCTAAAATTGGACCACCATGGAGAATGGGG...CCCCTCTGCTCCCATGCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CAA 72 bp CAGCCTTGGACCACTTTCTCCCTAAACATCCAGGCCTaGCTAAAGGACTTGGAAGGGGAGGGTGCATGGGAG +
Preference number: 4 (lower is better)
Translates to: QPWTTFSLNIQA*LKDLEGEGAWE
Trigger: CTCCCATGCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTGGATGTTTAGGGAGAAAGTGGTCCAAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR TCA 90 bp TCATTAATGTCTCTCCTGCCTAGAGTGCCCTCCCCATTCTGTATGGGTCAGGCTCAGCTTCACATAAGCTaGTGCGGACGGTGGGGACAG +
Preference number: 4 (lower is better)
Translates to: SLMSLLPRVPSPFCMGQAQLHIS*CGRWGQ
Trigger: CTGTCCCCACCGTCCGCATCAGCTTATGTGAAGCTG...AGCCTGACCCATACAGAATGGGGAGGGCACTCTAGGCAGGAGAGACATTAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR TCA 90 bp CACTTTCTCCCTAAACATCCAGGCCTTGCTAAAGGACTTGGAAGGGGAGGGTGCGGCTTCATCTTGCGGTaGCGATACTCGAAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: HFLPKHPGLAKGLGRGGCGFILR*RYSKRS
Trigger: GCTCCTCTTCGAGTATCGTCACCGCAAGATGAAGCC...GCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTGGATGTTTAGGGAGAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR TCA 90 bp CCCCACAAAACTAAATATGCCTCTTTCCCAGTCCCTCGCCCAGTCCTCCATCCTGCTGCTTTTCACCCTTaGCCTCGTCCATGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: PHKTKYASFPVPRPVLHPAAFHP*PRPCPV
Trigger: TACTGGGCATGGACGAGGTCAAGGGTGAAAAGCAGC...AGGATGGAGGACTGGGCGAGGGACTGGGAAAGAGGCATATTTAGTTTTGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR TCA 90 bp CACTTTCTCCCTAAACATCCAGGCCTTGCTAAAGGACTTGGAAGGGGAGGGTGCAGACTGAGACGGGGTTaGGATGGGGCTACAGGCTTT +
Preference number: 4 (lower is better)
Translates to: HFLPKHPGLAKGLGRGGCRLRRG*DGATGF
Trigger: AAAGCCTGTAGCCCCATCTCAACCCCGTCTCAGTCT...GCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTGGATGTTTAGGGAGAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR TCA 90 bp GTGTGGGTCTCTTCAGTTCGAGGAGTTCAGCTCACATCTTACTCTTCACCTAACGCTCCCATCCCAGACTaGGCAGTCCCTCCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: VWVSSVRGVQLTSYSSPNAPIPD*AVPPEA
Trigger: GGCTTCTGGAGGGACTGCTCAGTCTGGGATGGGAGC...GTTAGGTGAAGAGTAAGATGTGAGCTGAACTCCTCGAACTGAAGAGACCCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR GCA 90 bp ATCCATCTCTTGACCACTCGACTTCCTACCACGGGCACATACTCTAGTTTGTCTCAAGCCTCCAGCAGATaGTCAGGGTCCGGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: IHLLTTRLPTTGTYSSLSQASSR*SGSGAP
Trigger: AGGAGCCCCGGACCCTGAGCATCTGCTGGAGGCTTG...AGACAAACTAGAGTATGTGCCCGTGGTAGGAAGTCGAGTGGTCAAGAGATGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR GCA 90 bp TCAGGGCCTGGGCCAAGGGAGGCCCATCTTGTGAGATGGGAGTCTACCCTCTTGGACTTCTCCAACAGATaGACAAGAACCATTTGGGAG +
Preference number: 4 (lower is better)
Translates to: SGPGPREAHLVRWESTLLDFSNR*TRTIWE
Trigger: CTCCCAAATGGTTCTTGTGCATCTGTTGGAGAAGTC...CAAGAGGGTAGACTCCCATCTCACAAGATGGGCCTCCCTTGGCCCAGGCCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR GCA 90 bp CACCCCTGGGAGGAGGCTTGGATCTCCCTCCTGGAGAATCTGACTGCAGTGTGCGTGTATGCATGCACGTaGTGTATCTGTCCCCATATA +
Preference number: 4 (lower is better)
Translates to: HPWEEAWISLLENLTAVCVYACT*CICPHI
Trigger: TATATGGGGACAGATACAGCACGTGCATGCATACAC...GCACACTGCAGTCAGATTCTCCAGGAGGGAGATCCAAGCCTCCTCCCAGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp TTGGTCAAAGCTGACCAAAGTCCCAGCTGCATACAGTGGCCCCTAGGAAGGGCTTGGAATGTCCAGTTCTaGCTGATGGCTGGCACCATC +
Preference number: 4 (lower is better)
Translates to: LVKADQSPSCIQWPLGRAWNVQF*LMAGTI
Trigger: GATGGTGCCAGCCATCAGCCAGAACTGGACATTCCA...AGCCCTTCCTAGGGGCCACTGTATGCAGCTGGGACTTTGGTCAGCTTTGACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp TCCCTCGCCCAGTCCTCCATCCTTGGGAGGTGTTGGCAAAGGTGCCTAGATTACTGCACAAGAACCATTTaGGAGGTCTGGACATGGTGG +
Preference number: 4 (lower is better)
Translates to: SLAQSSILGRCWQRCLDYCTRTI*EVWTWW
Trigger: CCACCATGTCCAGACCTCCCAAATGGTTCTTGTGCA...GTAATCTAGGCACCTTTGCCAACACCTCCCAAGGATGGAGGACTGGGCGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp CATCAGTTTCCCTCACATTTGATCCTCAATTCCCAGTCCCCATTCTCCATGGTGACCTGGGCCCATCCTTaGGGCCCTTCTCCCTACTCC +
Preference number: 4 (lower is better)
Translates to: HQFPSHLILNSQSPFSMVTWAHP*GPSPYS
Trigger: GGAGTAGGGAGAAGGGCCCCAAGGATGGGCCCAGGT...CACCATGGAGAATGGGGACTGGGAATTGAGGATCAAATGTGAGGGAAACTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp CACTTTCTCCCTAAACATCCAGGCCTTGCTAAAGGACTTGGAAGGGGAGGGTGCCTCAGGAAGAAGAGTTaGGGGCTGGGGATCCTGAAG +
Preference number: 4 (lower is better)
Translates to: HFLPKHPGLAKGLGRGGCLRKKS*GLGILK
Trigger: CTTCAGGATCCCCAGCCCCCAACTCTTCTTCCTGAG...GCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTGGATGTTTAGGGAGAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp AGGAACACCTTGTTTGAGTTTGGGAAGGAGACTGAGACGGGGTTGAGATGGGGCGAGACGGGGTTGAGATaGGGCTACAGGCTTTGTGAG +
Preference number: 4 (lower is better)
Translates to: RNTLFEFGKETETGLRWGETGLR*GYRLCE
Trigger: CTCACAAAGCCTGTAGCCCCATCTCAACCCCGTCTC...GCCCCATCTCAACCCCGTCTCAGTCTCCTTCCCAAACTCAAACAAGGTGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR TCA 90 bp TTTGATCCTCAATTCCCAGTCCCCATTCTCCATGGTGGTCCAATTTTAGGAACACCCCAGCAGGGGGCGTaGGTCCTCAGGCACTTCTTG +
Preference number: 4 (lower is better)
Translates to: FDPQFPVPILHGGPILGTPQQGA*VLRHFL
Trigger: CAAGAAGTGCCTGAGGACTCACGCCCCCTGCTGGGG...TGTTCCTAAAATTGGACCACCATGGAGAATGGGGACTGGGAATTGAGGATCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR TCA 90 bp CATCCAGGCCTTGCTAAAGGACTTGGAAGGGGAGGGTGCATGGGAGCAGAGGGGGAGAGAGAGAGAGAATaGGATTGTAGAAGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: HPGLAKGLGRGGCMGAEGERERE*DCRSGE
Trigger: TTCTCCACTTCTACAATCTCATTCTCTCTCTCTCTC...CCCCTCTGCTCCCATGCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR GCA 90 bp CATCAGTTTCCCTCACATTTGATCCTCAATTCCCAGTCCCCATTCTCCATGGTGGGGGGTCCCGGCAGGTaGTTCCTCCACTATACACTC +
Preference number: 4 (lower is better)
Translates to: HQFPSHLILNSQSPFSMVGGPGR*FLHYTL
Trigger: GAGTGTATAGTGGAGGAAGCACCTGCCGGGACCCCC...CACCATGGAGAATGGGGACTGGGAATTGAGGATCAAATGTGAGGGAAACTGATG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR GCA 90 bp TTGTCAGCAGCCTTGGACCACTTTCTCCCTAAACATCCAGGCCTTGCTAAAGGACACTCCTGCTTCTGTTaGCGTGGATACAGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: LSAALDHFLPKHPGLAKGHSCFC*RGYSRA
Trigger: AGCCCGGCTGTATCCACGGCAACAGAAGCAGGAGTG...TCCTTTAGCAAGGCCTGGATGTTTAGGGAGAAAGTGGTCCAAGGCTGCTGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR GCA 90 bp TTGTCAGCAGCCTTGGACCACTTTCTCCCTAAACATCCAGGCCTTGCTAAAGGAACTTTCCTGGTGGGCTaGTCCTGCCTGTATGGCACC +
Preference number: 4 (lower is better)
Translates to: LSAALDHFLPKHPGLAKGTFLVG*SCLYGT
Trigger: GGTGCCATACAGGCAGGAGCAGCCCACCAGGAAAGT...TCCTTTAGCAAGGCCTGGATGTTTAGGGAGAAAGTGGTCCAAGGCTGCTGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp GTGTGGGTCTCTTCAGTTCGAGGAGTTCAGCTCACATCTTACTCTTCACCTAACGGACCCTCAGTGATCTaGCGGCCAGTGACACTCCTG +
Preference number: 4 (lower is better)
Translates to: VWVSSVRGVQLTSYSSPNGPSVI*RPVTLL
Trigger: CAGGAGTGTCACTGGCCGCCAGATCACTGAGGGTCC...GTTAGGTGAAGAGTAAGATGTGAGCTGAACTCCTCGAACTGAAGAGACCCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp ATCCATCTCTTGACCACTCGACTTCCTACCACGGGCACATACTCTAGTTTGTCTAGGAGGACTCCTGTATaGGCCCCTACCCCTCCCTTG +
Preference number: 4 (lower is better)
Translates to: IHLLTTRLPTTGTYSSLSRRTPV*APTPPL
Trigger: CAAGGGAGGGGTAGGGGCCCATACAGGAGTCCTCCT...AGACAAACTAGAGTATGTGCCCGTGGTAGGAAGTCGAGTGGTCAAGAGATGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp AGGAACACCTTGTTTGAGTTTGGGAAGGAGACTGAGACGGGGTTGAGATGGGGCCTTACACTTTCCTGGTaGGCTGCTCCTGCCTGTATG +
Preference number: 4 (lower is better)
Translates to: RNTLFEFGKETETGLRWGLTLSW*AAPACM
Trigger: CATACAGGCAGGAGCAGCCCACCAGGAAAGTGTAAG...GCCCCATCTCAACCCCGTCTCAGTCTCCTTCCCAAACTCAAACAAGGTGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR TCA 90 bp CACTTTCTCCCTAAACATCCAGGCCTTGCTAAAGGACTTGGAAGGGGAGGGTGCATCCTGAAGGCAGCGTaGGAGAATGTGACCAAGTGT +
Preference number: 4 (lower is better)
Translates to: HFLPKHPGLAKGLGRGGCILKAA*ENVTKC
Trigger: ACACTTGGTCACATTCTCTCACGCTGCCTTCAGGAT...GCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTGGATGTTTAGGGAGAAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR TCA 90 bp AGGAACACCTTGTTTGAGTTTGGGAAGGAGACTGAGACGGGGTTGAGATGGGGCGGGCTACAGGCTTTGTaGGGAGATGAGGTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: RNTLFEFGKETETGLRWGGLQAL*GDEVFK
Trigger: CTTGAAAACCTCATCTCCTCACAAAGCCTGTAGCCC...GCCCCATCTCAACCCCGTCTCAGTCTCCTTCCCAAACTCAAACAAGGTGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR TCA 90 bp TCCCTCGCCCAGTCCTCCATCCTTGGGAGGTGTTGGCAAAGGTGCCTAGATTACAAATTTGGTCAAAGCTaGCCAAAGTCCCAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: SLAQSSILGRCWQRCLDYKFGQS*PKSQLH
Trigger: ATGCAGCTGGGACTTTGGTCAGCTTTGACCAAATTT...GTAATCTAGGCACCTTTGCCAACACCTCCCAAGGATGGAGGACTGGGCGAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR GCA 90 bp TTTGATCCTCAATTCCCAGTCCCCATTCTCCATGGTGGTCCAATTTTAGGAACAGGGATGGGGAAGAGGTaGAGGTCCACAGCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: FDPQFPVPILHGGPILGTGMGKR*RSTARG
Trigger: GCCTCTGGCTGTGGACCTGCACCTCTTCCCCATCCC...TGTTCCTAAAATTGGACCACCATGGAGAATGGGGACTGGGAATTGAGGATCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp TCATTAATGTCTCTCCTGCCTAGAGTGCCCTCCCCATTCTGTATGGGTCAGGCTTCTTGGAATCCACGATaGGGCTCAAGCTGTCTCACC +
Preference number: 4 (lower is better)
Translates to: SLMSLLPRVPSPFCMGQASWNPR*GSSCLT
Trigger: GGTGAGACAGCTTGAGCCCCATCGTGGATTCCAAGA...AGCCTGACCCATACAGAATGGGGAGGGCACTCTAGGCAGGAGAGACATTAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp ATCCATCTCTTGACCACTCGACTTCCTACCACGGGCACATACTCTAGTTTGTCTAGAGTGTCATGCGCTTaGCGTAGAAGCGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: IHLLTTRLPTTGTYSSLSRVSCA*RRSGGG
Trigger: CCCACCACCGCTTCTACGCCAAGCGCATGACACTCT...AGACAAACTAGAGTATGTGCCCGTGGTAGGAAGTCGAGTGGTCAAGAGATGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp CCTGCCTGTATGGCACCCACATCAGTCCTAGTGGGGCTGGAGTGGATTTCCATCAGTCCCCATTCTCCATaGTGGTCCAATTTTAGGAAC +
Preference number: 4 (lower is better)
Translates to: PACMAPTSVLVGLEWISISPHSP*WSNFRN
Trigger: GTTCCTAAAATTGGACCACCATGGAGAATGGGGACT...GATGGAAATCCACTCCAGCCCCACTAGGACTGATGTGGGTGCCATACAGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR TCA 90 bp CACCCCTGGGAGGAGGCTTGGATCTCCCTCCTGGAGAATCTGACTGCAGTGTGCTACAAAATCCAATGGTaGATCCAGGCAGTTAGAAAA +
Preference number: 4 (lower is better)
Translates to: HPWEEAWISLLENLTAVCYKIQW*IQAVRK
Trigger: TTTTCTAACTGCCTGGATTCACCATTGGATTTTGTA...GCACACTGCAGTCAGATTCTCCAGGAGGGAGATCCAAGCCTCCTCCCAGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR GCA 90 bp TCATTAATGTCTCTCCTGCCTAGAGTGCCCTCCCCATTCTGTATGGGTCAGGCTGCACTGGCTTCATCTTaGGGTGACGATACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: SLMSLLPRVPSPFCMGQAALASS*GDDTRR
Trigger: TCTTCGAGTATCGTCACCGCAAGATGAAGCCAGTGC...AGCCTGACCCATACAGAATGGGGAGGGCACTCTAGGCAGGAGAGACATTAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp AGGAACACCTTGTTTGAGTTTGGGAAGGAGACTGAGACGGGGTTGAGATGGGGCTGCTCAAAGATGCACTaGTCCTCCTCCCGAATAAAC +
Preference number: 4 (lower is better)
Translates to: RNTLFEFGKETETGLRWGCSKMH*SSSRIN
Trigger: GTTTATTCGGGAGGAGGACCAGTGCATCTTTGAGCA...GCCCCATCTCAACCCCGTCTCAGTCTCCTTCCCAAACTCAAACAAGGTGTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp ATCCATCTCTTGACCACTCGACTTCCTACCACGGGCACATACTCTAGTTTGTCTTGGCACCATCTGCACTaGCTTCATCTTGCGGTGACG +
Preference number: 4 (lower is better)
Translates to: IHLLTTRLPTTGTYSSLSWHHLH*LHLAVT
Trigger: CGTCACCGCAAGATGAAGCCAGTGCAGATGGTGCCA...AGACAAACTAGAGTATGTGCCCGTGGTAGGAAGTCGAGTGGTCAAGAGATGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp CACTTTCTCCCTAAACATCCAGGCCTTGCTAAAGGACTTGGAAGGGGAGGGTGCACAAATTCCCCCTTCTaGACAGTGTCAGAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: HFLPKHPGLAKGLGRGGCTNSPF*TVSEGE
Trigger: CTCTCCTTCTGACACTGTCCAGAAGGGGGAATTTGT...GCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTGGATGTTTAGGGAGAAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp AGGAACACCTTGTTTGAGTTTGGGAAGGAGACTGAGACGGGGTTGAGATGGGGCTCTTGTCAGCAGCCTTaGACCACTTTCTCCCTAAAC +
Preference number: 4 (lower is better)
Translates to: RNTLFEFGKETETGLRWGSCQQP*TTFSLN
Trigger: GTTTAGGGAGAAAGTGGTCCAAGGCTGCTGACAAGA...GCCCCATCTCAACCCCGTCTCAGTCTCCTTCCCAAACTCAAACAAGGTGTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp TTTGATCCTCAATTCCCAGTCCCCATTCTCCATGGTGGTCCAATTTTAGGAACAACCCAGCACCCCCTTTaGTCCCTCTTGTCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: FDPQFPVPILHGGPILGTTQHPL*SLLSAA
Trigger: GGCTGCTGACAAGAGGGACCAAAGGGGGTGCTGGGT...TGTTCCTAAAATTGGACCACCATGGAGAATGGGGACTGGGAATTGAGGATCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp CACTTTCTCCCTAAACATCCAGGCCTTGCTAAAGGACTTGGAAGGGGAGGGTGCGAAGCCATTACTTTGTaGGGGGCATTTCCTAACCTC +
Preference number: 4 (lower is better)
Translates to: HFLPKHPGLAKGLGRGGCEAITL*GAFPNL
Trigger: GAGGTTAGGAAATGCCCCCCACAAAGTAATGGCTTC...GCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTGGATGTTTAGGGAGAAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CAA 72 bp ACCACTCGACTTCCTACCACGGGCACATACTCTAGTTaGTCTCCTCTCAACTGTGGTGTGTGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: TTRLPTTGTYSS*SPLNCGVCVCV
Trigger: CACACACACACACACACCACAGTTGAGAGGAGACAAACTAGAGTATGTGCCCGTGGTAGGAAGTCGAGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CAA 72 bp AGGGAGGCCCATCTTGTGAGATGGGAGTCTACCCTCTaGCTACCGACCTATGTAGTTTCCAAGATCCATCTC +
Preference number: 4 (lower is better)
Translates to: REAHLVRWESTL*LPTYVVSKIHL
Trigger: GAGATGGATCTTGGAAACTACATAGGTCGGTAGCAAGAGGGTAGACTCCCATCTCACAAGATGGGCCTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR TCA 90 bp CTAACCTCATCAGTTTCCCTCACATTTGATCCTCAATTCCCAGTCCCCATTCTCATGTCCAGTTCTGGCTaGTGGCTGGCACCATCTGCA +
Preference number: 4 (lower is better)
Translates to: LTSSVSLTFDPQFPVPILMSSSG*WLAPSA
Trigger: TGCAGATGGTGCCAGCCATCAGCCAGAACTGGACAT...GAGAATGGGGACTGGGAATTGAGGATCAAATGTGAGGGAAACTGATGAGGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR TCA 90 bp GCACATACTCTAGTTTGTCTCCTCTCAACTGTGGTGTGTGTGTGTGTGTGTGTAGCAGAAAGAGCAGTGTaGTCGCGTAGAACATGCGGC +
Preference number: 4 (lower is better)
Translates to: AHTLVCLLSTVVCVCVCVAERAV*SRRTCG
Trigger: GCCGCATGTTCTACGCGATCACACTGCTCTTTCTGC...TACACACACACACACACACACCACAGTTGAGAGGAGACAAACTAGAGTATGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR GCA 90 bp GTGTGGGTCTCTTCAGTTCGAGGAGTTCAGCTCACATCTTACTCTTCACCTAACATGTCCAGAGTGTCATaGGCTTGGCGTAGAAGCGGT +
Preference number: 4 (lower is better)
Translates to: VWVSSVRGVQLTSYSSPNMSRVS*AWRRSG
Trigger: ACCGCTTCTACGCCAAGCGCATGACACTCTGGACAT...GTTAGGTGAAGAGTAAGATGTGAGCTGAACTCCTCGAACTGAAGAGACCCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR GCA 90 bp GTGTGGGTCTCTTCAGTTCGAGGAGTTCAGCTCACATCTTACTCTTCACCTAACGACAGCATGGGTAGCTaGCATGAGCACAGCCAACAT +
Preference number: 4 (lower is better)
Translates to: VWVSSVRGVQLTSYSSPNDSMGS*HEHSQH
Trigger: ATGTTGGCTGTGCTCATGGCAGCTACCCATGCTGTC...GTTAGGTGAAGAGTAAGATGTGAGCTGAACTCCTCGAACTGAAGAGACCCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp CATCAGTTTCCCTCACATTTGATCCTCAATTCCCAGTCCCCATTCTCCATGGTGAGAAGAGACTGGGCTTaGGGCAAGGGTTGGCCTAAA +
Preference number: 4 (lower is better)
Translates to: HQFPSHLILNSQSPFSMVRRDWA*GKGWPK
Trigger: TTTAGGCCAACCCTTGCCCCAAGCCCAGTCTCTTCT...CACCATGGAGAATGGGGACTGGGAATTGAGGATCAAATGTGAGGGAAACTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp CATCAGTTTCCCTCACATTTGATCCTCAATTCCCAGTCCCCATTCTCCATGGTGGGGAAGGAGGGTTGTTaGGAAAGAAGGATGCTTGGG +
Preference number: 4 (lower is better)
Translates to: HQFPSHLILNSQSPFSMVGKEGC*ERRMLG
Trigger: CCCAAGCATCCTTCTTTCCCAACAACCCTCCTTCCC...CACCATGGAGAATGGGGACTGGGAATTGAGGATCAAATGTGAGGGAAACTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR TCA 90 bp ATCCATCTCTTGACCACTCGACTTCCTACCACGGGCACATACTCTAGTTTGTCTTTCTCCCTACTCCCTTaGCTTCTCCAACAGATGCAC +
Preference number: 4 (lower is better)
Translates to: IHLLTTRLPTTGTYSSLSFSLLP*LLQQMH
Trigger: GTGCATCTGTTGGAGAAGTCAAGGGAGTAGGGAGAA...AGACAAACTAGAGTATGTGCCCGTGGTAGGAAGTCGAGTGGTCAAGAGATGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR TCA 90 bp GTGTGGGTCTCTTCAGTTCGAGGAGTTCAGCTCACATCTTACTCTTCACCTAACCCAAGATCCATCTCTTaGCCACTCGACTTCCTACCA +
Preference number: 4 (lower is better)
Translates to: VWVSSVRGVQLTSYSSPNPRSIS*PLDFLP
Trigger: TGGTAGGAAGTCGAGTGGTCAAGAGATGGATCTTGG...GTTAGGTGAAGAGTAAGATGTGAGCTGAACTCCTCGAACTGAAGAGACCCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp GTGTGGGTCTCTTCAGTTCGAGGAGTTCAGCTCACATCTTACTCTTCACCTAACAAGTCCACAGTGCCTTaGAGTTTGTACCGCTATCGG +
Preference number: 4 (lower is better)
Translates to: VWVSSVRGVQLTSYSSPNKSTVP*SLYRYR
Trigger: CCGATAGCGGTACAAACTCCAAGGCACTGTGGACTT...GTTAGGTGAAGAGTAAGATGTGAGCTGAACTCCTCGAACTGAAGAGACCCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp GTGTGGGTCTCTTCAGTTCGAGGAGTTCAGCTCACATCTTACTCTTCACCTAACATGTCTCTCCACATGTaGTCAGACAGGGCACATGCA +
Preference number: 4 (lower is better)
Translates to: VWVSSVRGVQLTSYSSPNMSLHM*SDRAHA
Trigger: TGCATGTGCCCTGTCTGACCACATGTGGAGAGACAT...GTTAGGTGAAGAGTAAGATGTGAGCTGAACTCCTCGAACTGAAGAGACCCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp GTGTGGGTCTCTTCAGTTCGAGGAGTTCAGCTCACATCTTACTCTTCACCTAACGTCTCCTCTCAACTGTaGTGTGTGTGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: VWVSSVRGVQLTSYSSPNVSSQL*CVCVCV
Trigger: CACACACACACACACACACCACAGTTGAGAGGAGAC...GTTAGGTGAAGAGTAAGATGTGAGCTGAACTCCTCGAACTGAAGAGACCCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CAA 72 bp GATAGGAATGGACTCAAGTCCACAGTGCCTTGGAGTTaGTACCGCTATCGGTTACCAAGGCCCCAAACAAAT +
Preference number: 4 (lower is better)
Translates to: DRNGLKSTVPWS*YRYRLPRPQTN
Trigger: ATTTGTTTGGGGCCTTGGTAACCGATAGCGGTACAAACTCCAAGGCACTGTGGACTTGAGTCCATTCCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
3UTR CAA 72 bp TTGCTACCGACCTATGTAGTTTCCAAGATCCATCTCTaGACCACTCGACTTCCTACCACGGGCACATACTCT +
Preference number: 4 (lower is better)
Translates to: LLPTYVVSKIHL*TTRLPTTGTYS
Trigger: AGAGTATGTGCCCGTGGTAGGAAGTCGAGTGGTCAAGAGATGGATCTTGGAAACTACATAGGTCGGTAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR TCA 90 bp GTGTGGGTCTCTTCAGTTCGAGGAGTTCAGCTCACATCTTACTCTTCACCTAACTTCAGAAGAGTAGGGTaGACCCGAGAGACAATTCTG +
Preference number: 4 (lower is better)
Translates to: VWVSSVRGVQLTSYSSPNFRRVG*TRETIL
Trigger: CAGAATTGTCTCTCGGGTTCACCCTACTCTTCTGAA...GTTAGGTGAAGAGTAAGATGTGAGCTGAACTCCTCGAACTGAAGAGACCCACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR GCA 90 bp CATCAGTTTCCCTCACATTTGATCCTCAATTCCCAGTCCCCATTCTCCATGGTGAGGTGTTGGCAAAGGTaGCTAGATTACAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: HQFPSHLILNSQSPFSMVRCWQR*LDYRWF
Trigger: GAACCACCTGTAATCTAGGCACCTTTGCCAACACCT...CACCATGGAGAATGGGGACTGGGAATTGAGGATCAAATGTGAGGGAAACTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR GCA 90 bp GCACATACTCTAGTTTGTCTCCTCTCAACTGTGGTGTGTGTGTGTGTGTGTGTAGACTCAAGTCCACAGTaGCTTGGAGTTTGTACCGCT +
Preference number: 4 (lower is better)
Translates to: AHTLVCLLSTVVCVCVCVDSSPQ*LGVCTA
Trigger: AGCGGTACAAACTCCAAGGCACTGTGGACTTGAGTC...TACACACACACACACACACACCACAGTTGAGAGGAGACAAACTAGAGTATGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR GCA 90 bp TTTGATCCTCAATTCCCAGTCCCCATTCTCCATGGTGGTCCAATTTTAGGAACACCTGGAGAATCTGACTaGAGTGTGCTCCACTTTGGG +
Preference number: 4 (lower is better)
Translates to: FDPQFPVPILHGGPILGTPGESD*SVLHFG
Trigger: CCCAAAGTGGAGCACACTGCAGTCAGATTCTCCAGG...TGTTCCTAAAATTGGACCACCATGGAGAATGGGGACTGGGAATTGAGGATCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CCA 90 bp CTAACCTCATCAGTTTCCCTCACATTTGATCCTCAATTCCCAGTCCCCATTCTCGCTTGGGGCAAGGGTTaGCCTAAAACAACATTGCAC +
Preference number: 4 (lower is better)
Translates to: LTSSVSLTFDPQFPVPILAWGKG*PKTTLH
Trigger: GTGCAATGTTGTTTTAGGCCAACCCTTGCCCCAAGC...GAGAATGGGGACTGGGAATTGAGGATCAAATGTGAGGGAAACTGATGAGGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR TCA 90 bp CATCAGTTTCCCTCACATTTGATCCTCAATTCCCAGTCCCCATTCTCCATGGTGCTGAATTGTCACTTCTaGGAGAGAGAGAGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: HQFPSHLILNSQSPFSMVLNCHF*ERERER
Trigger: TCTCTCTCTCTCTCTCTCTCAGAAGTGACAATTCAG...CACCATGGAGAATGGGGACTGGGAATTGAGGATCAAATGTGAGGGAAACTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR GCA 90 bp TTTGATCCTCAATTCCCAGTCCCCATTCTCCATGGTGGTCCAATTTTAGGAACAGTAATTAAACATCCCTaGTCCCTGGGAACCCAGCAC +
Preference number: 4 (lower is better)
Translates to: FDPQFPVPILHGGPILGTVIKHP*SLGTQH
Trigger: GTGCTGGGTTCCCAGGGAGCAGGGATGTTTAATTAC...TGTTCCTAAAATTGGACCACCATGGAGAATGGGGACTGGGAATTGAGGATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR TCA 90 bp TTGTCAGCAGCCTTGGACCACTTTCTCCCTAAACATCCAGGCCTTGCTAAAGGATCAATTCTGTGCACCTaGGAGAATAACCAGATAGTA +
Preference number: 4 (lower is better)
Translates to: LSAALDHFLPKHPGLAKGSILCT*ENNQIV
Trigger: TACTATCTGGTTATTCTCTCAGGTGCACAGAATTGA...TCCTTTAGCAAGGCCTGGATGTTTAGGGAGAAAGTGGTCCAAGGCTGCTGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR GCA 90 bp CTAACCTCATCAGTTTCCCTCACATTTGATCCTCAATTCCCAGTCCCCATTCTCAATGATGATATAGTGTaGCAAGAACTGAGGAGTATG +
Preference number: 4 (lower is better)
Translates to: LTSSVSLTFDPQFPVPILNDDIV*QELRSM
Trigger: CATACTCCTCAGTTCTTGGCACACTATATCATCATT...GAGAATGGGGACTGGGAATTGAGGATCAAATGTGAGGGAAACTGATGAGGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS CCA 90 bp CCGCCGGCTGGCTGCATGCCCATTCTGCCGGATACCCAGCAGGGTTaGTGGCATGGGCCCACGGCCAAAGCCGGCGATCCAGTTGGCAGC +
Preference number: 5 (lower is better)
Translates to: PPAGCMPILPDTQQG*WHGPTAKAGDPVGS
Trigger: GCTGCCAACTGGATCGCCGGCTTTGGCCGTGGGCCCATGCCACCAACCCTGCTGGGTATCCGGCAGAATGGGCATGCAGCCAGCCGGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS CCA 90 bp CCGGCTGGCTGCATGCCCATTCTGCCGGATACCCAGCAGGGTTGGTaGCATGGGCCCACGGCCAAAGCCGGCGATCCAGTTGGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: PAGCMPILPDTQQGW*HGPTAKAGDPVGSS
Trigger: GCTGCTGCCAACTGGATCGCCGGCTTTGGCCGTGGGCCCATGCCACCAACCCTGCTGGGTATCCGGCAGAATGGGCATGCAGCCAGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS GCA 90 bp ACCTCGTCCATGCCCAGTAGCCGCCGGCTGGCTGCATGCCCATTCTaGCGGATACCCAGCAGGGTTGGTGGCATGGGCCCACGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: TSSMPSSRRLAACPF*RIPSRVGGMGPRPK
Trigger: CTTTGGCCGTGGGCCCATGCCACCAACCCTGCTGGGTATCCGGCAGAATGGGCATGCAGCCAGCCGGCGGCTACTGGGCATGGACGAGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS CCA 90 bp TGGCTGCATGCCCATTCTGCCGGATACCCAGCAGGGTTGGTGGCATaGGCCCACGGCCAAAGCCGGCGATCCAGTTGGCAGCAGCCTGGC +
Preference number: 5 (lower is better)
Translates to: WLHAHSAGYPAGLVA*AHGQSRRSSWQQPG
Trigger: GCCAGGCTGCTGCCAACTGGATCGCCGGCTTTGGCCGTGGGCCCATGCCACCAACCCTGCTGGGTATCCGGCAGAATGGGCATGCAGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CAA 90 bp TTGGTCAAAGCTGACCAAAGTCCCAGCTGCATACAGTGGCCCCTAGGAAGGGCTAAGCCGGCGATCCAGTaGGCAGCAGCCTGGCCGGTG +
Preference number: 5 (lower is better)
Translates to: LVKADQSPSCIQWPLGRAKPAIQ*AAAWPV
Trigger: CACCGGCCAGGCTGCTGCCAACTGGATCGCCGGCTT...AGCCCTTCCTAGGGGCCACTGTATGCAGCTGGGACTTTGGTCAGCTTTGACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CAA 90 bp CATCCAGGCCTTGCTAAAGGACTTGGAAGGGGAGGGTGCATGGGAGCAGAGGGGCCCCTTTGGTCCCTCTaGTCAGCAGCCTTGGACCAC +
Preference number: 5 (lower is better)
Translates to: HPGLAKGLGRGGCMGAEGPLWSL*SAALDH
Trigger: GTGGTCCAAGGCTGCTGACAAGAGGGACCAAAGGGG...CCCCTCTGCTCCCATGCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS TCA 90 bp GCTCACGCACATAATCAGTCCCAGCAGTACCAGCTTCACATAAGCTaGTGCGGACGGTGGGGACAGAGCGCCGCTCACCTCCTCAGGCTC +
Preference number: 5 (lower is better)
Translates to: AHAHNQSQQYQLHIS*CGRWGQSAAHLLRL
Trigger: GAGCCTGAGGAGGTGAGCGGCGCTCTGTCCCCACCGTCCGCATCAGCTTATGTGAAGCTGGTACTGCTGGGACTGATTATGTGCGTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332582.5
ENST00000375466.2
CDS-3UTR CAA 90 bp CCTGCCTGTATGGCACCCACATCAGTCCTAGTGGGGCTGGAGTGGATTTCCATCGCTGGCCGCCGCCTTTaGTCCTCAGAAGACACGGTC +
Preference number: 5 (lower is better)
Translates to: PACMAPTSVLVGLEWISIAGRRL*SSEDTV
Trigger: GACCGTGTCTTCTGAGGACAAAAGGCGGCGGCCAGC...GATGGAAATCCACTCCAGCCCCACTAGGACTGATGTGGGTGCCATACAGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CAA 90 bp CATCCAGGCCTTGCTAAAGGACTTGGAAGGGGAGGGTGCATGGGAGCAGAGGGGGAGACTGAGACGGGGTaGAGATGGGGCTACAGGCTT +
Preference number: 5 (lower is better)
Translates to: HPGLAKGLGRGGCMGAEGETETG*RWGYRL
Trigger: AAGCCTGTAGCCCCATCTCAACCCCGTCTCAGTCTC...CCCCTCTGCTCCCATGCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTGGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS CCA 90 bp CCCTCAGTGATCTGGCGGCCAGTGACACTCCTGCTTCTGTTGCCGTaGATACAGCCGGGCTGGTCTAAATCGCAGGCATCAGGGAAAGCA +
Preference number: 5 (lower is better)
Translates to: PSVIWRPVTLLLLLP*IQPGWSKSQASGKA
Trigger: TGCTTTCCCTGATGCCTGCGATTTAGACCAGCCCGGCTGTATCCACGGCAACAGAAGCAGGAGTGTCACTGGCCGCCAGATCACTGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332582.5
ENST00000375466.2
CDS CCA 90 bp CATTGCACCTTGGCTCTCTCAGCAGGGATGTCTTGGAATCCACGATaGGGCTCAAGCTGTCTCACCCAGGTAAATCACAGCCCGGGCCAC +
Preference number: 5 (lower is better)
Translates to: HCTLALSAGMSWNPR*GSSCLTQVNHSPGH
Trigger: GTGGCCCGGGCTGTGATTTACCTGGGTGAGACAGCTTGAGCCCCATCGTGGATTCCAAGACATCCCTGCTGAGAGAGCCAAGGTGCAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CAA 90 bp CACCCCTGGGAGGAGGCTTGGATCTCCCTCCTGGAGAATCTGACTGCAGTGTGCAGTTGTCCTGCTACATaGCACCTTGGCTCTCTCAGC +
Preference number: 5 (lower is better)
Translates to: HPWEEAWISLLENLTAVCSCPAT*HLGSLS
Trigger: GCTGAGAGAGCCAAGGTGCAATGTAGCAGGACAACT...GCACACTGCAGTCAGATTCTCCAGGAGGGAGATCCAAGCCTCCTCCCAGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CAA 90 bp CCCCACAAAACTAAATATGCCTCTTTCCCAGTCCCTCGCCCAGTCCTCCATCCTTGCAGGGCACGCTCCTaGAGCACCAGCAGGGACAAG +
Preference number: 5 (lower is better)
Translates to: PHKTKYASFPVPRPVLHPCRARS*STSRDK
Trigger: CTTGTCCCTGCTGGTGCTCAAGGAGCGTGCCCTGCA...AGGATGGAGGACTGGGCGAGGGACTGGGAAAGAGGCATATTTAGTTTTGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS CCA 90 bp AACTCCATCTTGGCTCTCTCAGCAGGGATGTCTTGGAATCCACGATaGGGCTCAAGCTGTCTCACCCAGGTAAATCACAGCCCGGGCCAC +
Preference number: 5 (lower is better)
Translates to: NSILALSAGMSWNPR*GSSCLTQVNHSPGH
Trigger: GTGGCCCGGGCTGTGATTTACCTGGGTGAGACAGCTTGAGCCCCATCGTGGATTCCAAGACATCCCTGCTGAGAGAGCCAAGATGGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375466.2
CDS-3UTR CAA 90 bp CACTTTCTCCCTAAACATCCAGGCCTTGCTAAAGGACTTGGAAGGGGAGGGTGCGGCTCTCCGGTAGTGTaGGCCATACTGAGGGTCAGG +
Preference number: 5 (lower is better)
Translates to: HFLPKHPGLAKGLGRGGCGSPVV*AILRVR
Trigger: CCTGACCCTCAGTATGGCCAACACTACCGGAGAGCC...GCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTGGATGTTTAGGGAGAAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CAA 90 bp TTGGTCAAAGCTGACCAAAGTCCCAGCTGCATACAGTGGCCCCTAGGAAGGGCTAAGCAGACAATTGGGTaGACGGCAGCCTGGGCGAAG +
Preference number: 5 (lower is better)
Translates to: LVKADQSPSCIQWPLGRAKQTIG*TAAWAK
Trigger: CTTCGCCCAGGCTGCCGTCAACCCAATTGTCTGCTT...AGCCCTTCCTAGGGGCCACTGTATGCAGCTGGGACTTTGGTCAGCTTTGACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CAA 90 bp TCAGGGCCTGGGCCAAGGGAGGCCCATCTTGTGAGATGGGAGTCTACCCTCTTGCATCCTTGGGAGGTGTaGGCAAAGGTGCCTAGATTA +
Preference number: 5 (lower is better)
Translates to: SGPGPREAHLVRWESTLLHPWEV*AKVPRL
Trigger: TAATCTAGGCACCTTTGCCAACACCTCCCAAGGATG...CAAGAGGGTAGACTCCCATCTCACAAGATGGGCCTCCCTTGGCCCAGGCCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CAA 90 bp TTTGGGAAGGAGACTGAGACGGGGTTGAGATGGGGCTACAGGCTTTGTGAGGAGGCCTTGCTAAAGGACTaGGAAGGGGAGGGTGCATGG +
Preference number: 5 (lower is better)
Translates to: FGKETETGLRWGYRLCEEALLKD*EGEGAW
Trigger: CCATGCACCCTCCCCTTCCAAGTCCTTTAGCAAGGC...CTCCTCACAAAGCCTGTAGCCCCATCTCAACCCCGTCTCAGTCTCCTTCCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CAA 90 bp CAGGCCTTGCTAAAGGACTTGGAAGGGGAGGGTGCATGGGAGCAGAGGGGGCAAATGCACAAGAACCATTaGGGAGGTCTGGACATGGTG +
Preference number: 5 (lower is better)
Translates to: QALLKDLEGEGAWEQRGQMHKNH*GGLDMV
Trigger: CACCATGTCCAGACCTCCCAAATGGTTCTTGTGCAT...TTGCCCCCTCTGCTCCCATGCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CAA 90 bp TTGGTCAAAGCTGACCAAAGTCCCAGCTGCATACAGTGGCCCCTAGGAAGGGCTCTGCTACATTGCACCTaGGCTCTCTCAGCAGGGATG +
Preference number: 5 (lower is better)
Translates to: LVKADQSPSCIQWPLGRALLHCT*ALSAGM
Trigger: CATCCCTGCTGAGAGAGCCAAGGTGCAATGTAGCAG...AGCCCTTCCTAGGGGCCACTGTATGCAGCTGGGACTTTGGTCAGCTTTGACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CAA 90 bp TCAGGGCCTGGGCCAAGGGAGGCCCATCTTGTGAGATGGGAGTCTACCCTCTTGGAGACAATTCTGGGGTaGAAATCAGCTCTGACCCAA +
Preference number: 5 (lower is better)
Translates to: SGPGPREAHLVRWESTLLETILG*KSALTQ
Trigger: TTGGGTCAGAGCTGATTTCAACCCCAGAATTGTCTC...CAAGAGGGTAGACTCCCATCTCACAAGATGGGCCTCCCTTGGCCCAGGCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CAA 90 bp CAGGCCTTGCTAAAGGACTTGGAAGGGGAGGGTGCATGGGAGCAGAGGGGGCAACAGTTTCCCTCACATTaGATCCTCAATTCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: QALLKDLEGEGAWEQRGQQFPSH*ILNSQS
Trigger: GGACTGGGAATTGAGGATCAAATGTGAGGGAAACTG...TTGCCCCCTCTGCTCCCATGCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CAA 90 bp GTGTGGGTCTCTTCAGTTCGAGGAGTTCAGCTCACATCTTACTCTTCACCTAACGGGCAGCACACAGCCTaGGGGTGTCCAACTAGCTGG +
Preference number: 5 (lower is better)
Translates to: VWVSSVRGVQLTSYSSPNGQHTA*GCPTSW
Trigger: CCAGCTAGTTGGACACCCCAAGGCTGTGTGCTGCCC...GTTAGGTGAAGAGTAAGATGTGAGCTGAACTCCTCGAACTGAAGAGACCCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CAA 90 bp TTTGATCCTCAATTCCCAGTCCCCATTCTCCATGGTGGTCCAATTTTAGGAACAGGATACCCAGCAGGGTaGGTGGCATGGGCCCACGGC +
Preference number: 5 (lower is better)
Translates to: FDPQFPVPILHGGPILGTGYPAG*VAWAHG
Trigger: GCCGTGGGCCCATGCCACCAACCCTGCTGGGTATCC...TGTTCCTAAAATTGGACCACCATGGAGAATGGGGACTGGGAATTGAGGATCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CAA 90 bp ATGTCTCTCCTGCCTAGAGTGCCCTCCCCATTCTGTATGGGTCAGGCTTCCCCAACAGTGCCTTGGAGTTaGTACCGCTATCGGTTACCA +
Preference number: 5 (lower is better)
Translates to: MSLLPRVPSPFCMGQASPTVPWS*YRYRLP
Trigger: TGGTAACCGATAGCGGTACAAACTCCAAGGCACTGT...TGGGGAAGCCTGACCCATACAGAATGGGGAGGGCACTCTAGGCAGGAGAGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CAA 90 bp CACTTTCTCCCTAAACATCCAGGCCTTGCTAAAGGACTTGGAAGGGGAGGGTGCGCAAGGAGTGCCAGCTaGGCTCACCAATCCACAGAA +
Preference number: 5 (lower is better)
Translates to: HFLPKHPGLAKGLGRGGCARSAS*AHQSTE
Trigger: TTCTGTGGATTGGTGAGCCAAGCTGGCACTCCTTGC...GCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTGGATGTTTAGGGAGAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CAA 90 bp ATGTCTCTCCTGCCTAGAGTGCCCTCCCCATTCTGTATGGGTCAGGCTTCCCCATGGGAGTCTACCCTCTaGCTACCGACCTATGTAGTT +
Preference number: 5 (lower is better)
Translates to: MSLLPRVPSPFCMGQASPWESTL*LPTYVV
Trigger: AACTACATAGGTCGGTAGCAAGAGGGTAGACTCCCA...TGGGGAAGCCTGACCCATACAGAATGGGGAGGGCACTCTAGGCAGGAGAGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS GCA 90 bp ACGATACTCGAAGAGGAGCAGCTTGCCGTAGACAGCATGGGTAGCTaGCATGAGCACAGCCAACATAAGCATGAAGCCCAGCGTGTCATT +
Preference number: 5 (lower is better)
Translates to: TILEEEQLAVDSMGS*HEHSQHKHEAQRVI
Trigger: AATGACACGCTGGGCTTCATGCTTATGTTGGCTGTGCTCATGGCAGCTACCCATGCTGTCTACGGCAAGCTGCTCCTCTTCGAGTATCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS CCA 90 bp GTTGTCCTGCTACATTGCACCTTGGCTCTCTCAGCAGGGATGTCTTaGAATCCACGATGGGGCTCAAGCTGTCTCACCCAGGTAAATCAC +
Preference number: 5 (lower is better)
Translates to: VVLLHCTLALSAGMS*NPRWGSSCLTQVNH
Trigger: GTGATTTACCTGGGTGAGACAGCTTGAGCCCCATCGTGGATTCCAAGACATCCCTGCTGAGAGAGCCAAGGTGCAATGTAGCAGGACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CAA 90 bp AGGAACACCTTGTTTGAGTTTGGGAAGGAGACTGAGACGGGGTTGAGATGGGGCCAAGTCCACAGTGCCTaGGAGTTTGTACCGCTATCG +
Preference number: 5 (lower is better)
Translates to: RNTLFEFGKETETGLRWGQVHSA*EFVPLS
Trigger: CGATAGCGGTACAAACTCCAAGGCACTGTGGACTTG...GCCCCATCTCAACCCCGTCTCAGTCTCCTTCCCAAACTCAAACAAGGTGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS CCA 90 bp CAACAAGAGCGAAACTCCATCTTGGCTCTCTCAGCAGGGATGTCTTaGAATCCACGATGGGGCTCAAGCTGTCTCACCCAGGTAAATCAC +
Preference number: 5 (lower is better)
Translates to: QQERNSILALSAGMS*NPRWGSSCLTQVNH
Trigger: GTGATTTACCTGGGTGAGACAGCTTGAGCCCCATCGTGGATTCCAAGACATCCCTGCTGAGAGAGCCAAGATGGAGTTTCGCTCTTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375466.2
CDS-3UTR CAA 90 bp CATCAGTTTCCCTCACATTTGATCCTCAATTCCCAGTCCCCATTCTCCATGGTGCTCAGCAGGGATGTCTaGGAATCCACGATGGGGCTC +
Preference number: 5 (lower is better)
Translates to: HQFPSHLILNSQSPFSMVLSRDV*ESTMGL
Trigger: GAGCCCCATCGTGGATTCCAAGACATCCCTGCTGAG...CACCATGGAGAATGGGGACTGGGAATTGAGGATCAAATGTGAGGGAAACTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CAA 90 bp CCCCACAAAACTAAATATGCCTCTTTCCCAGTCCCTCGCCCAGTCCTCCATCCTCTAAACATCCAGGCCTaGCTAAAGGACTTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: PHKTKYASFPVPRPVLHPLNIQA*LKDLEG
Trigger: CCCTTCCAAGTCCTTTAGCAAGGCCTGGATGTTTAG...AGGATGGAGGACTGGGCGAGGGACTGGGAAAGAGGCATATTTAGTTTTGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CAA 90 bp CACTTTCTCCCTAAACATCCAGGCCTTGCTAAAGGACTTGGAAGGGGAGGGTGCTCCAAGATCCATCTCTaGACCACTCGACTTCCTACC +
Preference number: 5 (lower is better)
Translates to: HFLPKHPGLAKGLGRGGCSKIHL*TTRLPT
Trigger: GGTAGGAAGTCGAGTGGTCAAGAGATGGATCTTGGA...GCACCCTCCCCTTCCAAGTCCTTTAGCAAGGCCTGGATGTTTAGGGAGAAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CAA 90 bp TTTGATCCTCAATTCCCAGTCCCCATTCTCCATGGTGGTCCAATTTTAGGAACAACACTCCTGCTTCTGTaGCCGTGGATACAGCCGGGC +
Preference number: 5 (lower is better)
Translates to: FDPQFPVPILHGGPILGTTLLLL*PWIQPG
Trigger: GCCCGGCTGTATCCACGGCAACAGAAGCAGGAGTGT...TGTTCCTAAAATTGGACCACCATGGAGAATGGGGACTGGGAATTGAGGATCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CAA 90 bp CTAACCTCATCAGTTTCCCTCACATTTGATCCTCAATTCCCAGTCCCCATTCTCGCAGTGTGCTCCACTTaGGGTGTAGGTAAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: LTSSVSLTFDPQFPVPILAVCST*GVGKGG
Trigger: CCCACCCTTACCTACACCCAAAGTGGAGCACACTGC...GAGAATGGGGACTGGGAATTGAGGATCAAATGTGAGGGAAACTGATGAGGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CAA 90 bp ATCCATCTCTTGACCACTCGACTTCCTACCACGGGCACATACTCTAGTTTGTCTCTCTTGTCAGCAGCCTaGGACCACTTTCTCCCTAAA +
Preference number: 5 (lower is better)
Translates to: IHLLTTRLPTTGTYSSLSLLSAA*DHFLPK
Trigger: TTTAGGGAGAAAGTGGTCCAAGGCTGCTGACAAGAG...AGACAAACTAGAGTATGTGCCCGTGGTAGGAAGTCGAGTGGTCAAGAGATGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CAA 90 bp GTGTGGGTCTCTTCAGTTCGAGGAGTTCAGCTCACATCTTACTCTTCACCTAACACACCTTGTTTGAGTTaGGGAAGGAGACTGAGACGG +
Preference number: 5 (lower is better)
Translates to: VWVSSVRGVQLTSYSSPNTPCLS*GRRLRR
Trigger: CCGTCTCAGTCTCCTTCCCAAACTCAAACAAGGTGT...GTTAGGTGAAGAGTAAGATGTGAGCTGAACTCCTCGAACTGAAGAGACCCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CAA 90 bp GTGTGGGTCTCTTCAGTTCGAGGAGTTCAGCTCACATCTTACTCTTCACCTAACGGCACATACTCTAGTTaGTCTCCTCTCAACTGTGGT +
Preference number: 5 (lower is better)
Translates to: VWVSSVRGVQLTSYSSPNGTYSS*SPLNCG
Trigger: ACCACAGTTGAGAGGAGACAAACTAGAGTATGTGCC...GTTAGGTGAAGAGTAAGATGTGAGCTGAACTCCTCGAACTGAAGAGACCCACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS-3UTR CAA 90 bp CTAACCTCATCAGTTTCCCTCACATTTGATCCTCAATTCCCAGTCCCCATTCTCTTAGGAACACCTTGTTaGAGTTTGGGAAGGAGACTG +
Preference number: 5 (lower is better)
Translates to: LTSSVSLTFDPQFPVPILLGTPC*SLGRRL
Trigger: CAGTCTCCTTCCCAAACTCAAACAAGGTGTTCCTAA...GAGAATGGGGACTGGGAATTGAGGATCAAATGTGAGGGAAACTGATGAGGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS CAA 90 bp GCCGCCGGCTGGCTGCATGCCCATTCTGCCGGATACCCAGCAGGGTaGGTGGCATGGGCCCACGGCCAAAGCCGGCGATCCAGTTGGCAG +
Preference number: 6 (lower is better)
Translates to: AAGWLHAHSAGYPAG*VAWAHGQSRRSSWQ
Trigger: CTGCCAACTGGATCGCCGGCTTTGGCCGTGGGCCCATGCCACCAACCCTGCTGGGTATCCGGCAGAATGGGCATGCAGCCAGCCGGCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS CCA 72 bp CCACGGCCAAAGCCGGCGATCCAGTTGGCAGCAGCCTaGCCGGTGGCCCCGGGACCATGGAATGTCCAGTTC +
Preference number: 6 (lower is better)
Translates to: PRPKPAIQLAAA*PVAPGPWNVQF
Trigger: GAACTGGACATTCCATGGTCCCGGGGCCACCGGCCAGGCTGCTGCCAACTGGATCGCCGGCTTTGGCCGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS GCA 72 bp ATGCCCAGTAGCCGCCGGCTGGCTGCATGCCCATTCTaGCGGATACCCAGCAGGGTTGGTGGCATGGGCCCA +
Preference number: 6 (lower is better)
Translates to: MPSSRRLAACPF*RIPSRVGGMGP
Trigger: TGGGCCCATGCCACCAACCCTGCTGGGTATCCGGCAGAATGGGCATGCAGCCAGCCGGCGGCTACTGGGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS GCA 72 bp ACCTCGTCCATGCCCAGTAGCCGCCGGCTGGCTGCATaGCCATTCTGCCGGATACCCAGCAGGGTTGGTGGC +
Preference number: 6 (lower is better)
Translates to: TSSMPSSRRLAA*PFCRIPSRVGG
Trigger: GCCACCAACCCTGCTGGGTATCCGGCAGAATGGGCATGCAGCCAGCCGGCGGCTACTGGGCATGGACGAGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS CCA 72 bp GGTGTTGGGGAACACCAGGTGGGCAGCACACAGCCTTaGGGTGTCCAACTAGCTGGCAGGTGGGGGTCCCGG +
Preference number: 6 (lower is better)
Translates to: GVGEHQVGSTQP*GVQLAGRWGSR
Trigger: CCGGGACCCCCACCTGCCAGCTAGTTGGACACCCCAAGGCTGTGTGCTGCCCACCTGGTGTTCCCCAACACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS CCA 72 bp GCCCATTCTGCCGGATACCCAGCAGGGTTGGTGGCATaGGCCCACGGCCAAAGCCGGCGATCCAGTTGGCAG +
Preference number: 6 (lower is better)
Translates to: AHSAGYPAGLVA*AHGQSRRSSWQ
Trigger: CTGCCAACTGGATCGCCGGCTTTGGCCGTGGGCCCATGCCACCAACCCTGCTGGGTATCCGGCAGAATGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS TCA 72 bp TCGCGTAGAACATGCGGCCCAGCTGCTTTTCACCCTTaGCCTCGTCCATGCCCAGTAGCCGCCGGCTGGCTG +
Preference number: 6 (lower is better)
Translates to: SRRTCGPAAFHP*PRPCPVAAGWL
Trigger: CAGCCAGCCGGCGGCTACTGGGCATGGACGAGGTCAAGGGTGAAAAGCAGCTGGGCCGCATGTTCTACGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS CCA 72 bp CACAGCCCGGGCCACATTGTGGGACCCTCAGTGATCTaGCGGCCAGTGACACTCCTGCTTCTGTTGCCGTGG +
Preference number: 6 (lower is better)
Translates to: HSPGHIVGPSVI*RPVTLLLLLPW
Trigger: CCACGGCAACAGAAGCAGGAGTGTCACTGGCCGCCAGATCACTGAGGGTCCCACAATGTGGCCCGGGCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332582.5
ENST00000375466.2
CDS CCA 72 bp TGCATGCCCATTCTGCCGGATACCCAGCAGGGTTGGTaGCATGGGCCCACGGCCAAAGCCGGCGATCCAGTT +
Preference number: 6 (lower is better)
Translates to: CMPILPDTQQGW*HGPTAKAGDPV
Trigger: AACTGGATCGCCGGCTTTGGCCGTGGGCCCATGCCACCAACCCTGCTGGGTATCCGGCAGAATGGGCATGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS CAA 72 bp AGAGCGCCGCTCACCTCCTCAGGCTCTCCGGTAGTGTaGGCCATACTGAGGGTCAGGGGCTACTGCCAACCC +
Preference number: 6 (lower is better)
Translates to: RAPLTSSGSPVV*AILRVRGYCQP
Trigger: GGGTTGGCAGTAGCCCCTGACCCTCAGTATGGCCAACACTACCGGAGAGCCTGAGGAGGTGAGCGGCGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332582.5
ENST00000375466.2
CDS CAA 90 bp GTGGGACCCTCAGTGATCTGGCGGCCAGTGACACTCCTGCTTCTGTaGCCGTGGATACAGCCGGGCTGGTCTAAATCGCAGGCATCAGGG +
Preference number: 6 (lower is better)
Translates to: VGPSVIWRPVTLLLL*PWIQPGWSKSQASG
Trigger: CCCTGATGCCTGCGATTTAGACCAGCCCGGCTGTATCCACGGCAACAGAAGCAGGAGTGTCACTGGCCGCCAGATCACTGAGGGTCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332582.5
ENST00000375466.2
CDS TCA 72 bp GGAAGTAGTAAGGAGCCTTGTGCAGGGCACGCTCCTTaGGCACCAGCAGGGACAAGATGGCGTTACCCGCCA +
Preference number: 6 (lower is better)
Translates to: GSSKEPCAGHAP*APAGTRWRYPP
Trigger: TGGCGGGTAACGCCATCTTGTCCCTGCTGGTGCTCAAGGAGCGTGCCCTGCACAAGGCTCCTTACTACTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS TCA 72 bp CATAATCAGTCCCAGCAGTACCAGCTTCACATAAGCTaGTGCGGACGGTGGGGACAGAGCGCCGCTCACCTC +
Preference number: 6 (lower is better)
Translates to: HNQSQQYQLHIS*CGRWGQSAAHL
Trigger: GAGGTGAGCGGCGCTCTGTCCCCACCGTCCGCATCAGCTTATGTGAAGCTGGTACTGCTGGGACTGATTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332582.5
ENST00000375466.2
CDS CCA 72 bp ACACTCCTGCTTCTGTTGCCGTGGATACAGCCGGGCTaGTCTAAATCGCAGGCATCAGGGAAAGCAGGCACC +
Preference number: 6 (lower is better)
Translates to: TLLLLLPWIQPG*SKSQASGKAGT
Trigger: GGTGCCTGCTTTCCCTGATGCCTGCGATTTAGACCAGCCCGGCTGTATCCACGGCAACAGAAGCAGGAGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332582.5
ENST00000375466.2
CDS CCA 72 bp ATCTGGCGGCCAGTGACACTCCTGCTTCTGTTGCCGTaGATACAGCCGGGCTGGTCTAAATCGCAGGCATCA +
Preference number: 6 (lower is better)
Translates to: IWRPVTLLLLLP*IQPGWSKSQAS
Trigger: TGATGCCTGCGATTTAGACCAGCCCGGCTGTATCCACGGCAACAGAAGCAGGAGTGTCACTGGCCGCCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332582.5
ENST00000375466.2
CDS CAA 90 bp AAGGCCGCATGGAAGCAAAAGAGCACGGCCATAAAGGCCACAATCTaGCAGCTGAGTGCACTGAAGGTCCATGAAGAGCCGTGGCGCACA +
Preference number: 6 (lower is better)
Translates to: KAAWKQKSTAIKATI*QLSALKVHEEPWRT
Trigger: TGTGCGCCACGGCTCTTCATGGACCTTCAGTGCACTCAGCTGCAAGATTGTGGCCTTTATGGCCGTGCTCTTTTGCTTCCATGCGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS GCA 72 bp GAAGAGGAGCAGCTTGCCGTAGACAGCATGGGTAGCTaGCATGAGCACAGCCAACATAAGCATGAAGCCCAG +
Preference number: 6 (lower is better)
Translates to: EEEQLAVDSMGS*HEHSQHKHEAQ
Trigger: CTGGGCTTCATGCTTATGTTGGCTGTGCTCATGGCAGCTACCCATGCTGTCTACGGCAAGCTGCTCCTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS CCA 72 bp CTACATTGCACCTTGGCTCTCTCAGCAGGGATGTCTTaGAATCCACGATGGGGCTCAAGCTGTCTCACCCAG +
Preference number: 6 (lower is better)
Translates to: LHCTLALSAGMS*NPRWGSSCLTQ
Trigger: CTGGGTGAGACAGCTTGAGCCCCATCGTGGATTCCAAGACATCCCTGCTGAGAGAGCCAAGGTGCAATGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS CCA 72 bp CGAAACTCCATCTTGGCTCTCTCAGCAGGGATGTCTTaGAATCCACGATGGGGCTCAAGCTGTCTCACCCAG +
Preference number: 6 (lower is better)
Translates to: RNSILALSAGMS*NPRWGSSCLTQ
Trigger: CTGGGTGAGACAGCTTGAGCCCCATCGTGGATTCCAAGACATCCCTGCTGAGAGAGCCAAGATGGAGTTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375466.2
CDS CAA 72 bp GCTACATTGCACCTTGGCTCTCTCAGCAGGGATGTCTaGGAATCCACGATGGGGCTCAAGCTGTCTCACCCA +
Preference number: 6 (lower is better)
Translates to: ATLHLGSLSRDV*ESTMGLKLSHP
Trigger: TGGGTGAGACAGCTTGAGCCCCATCGTGGATTCCAAGACATCCCTGCTGAGAGAGCCAAGGTGCAATGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS CAA 72 bp GCGAAACTCCATCTTGGCTCTCTCAGCAGGGATGTCTaGGAATCCACGATGGGGCTCAAGCTGTCTCACCCA +
Preference number: 6 (lower is better)
Translates to: AKLHLGSLSRDV*ESTMGLKLSHP
Trigger: TGGGTGAGACAGCTTGAGCCCCATCGTGGATTCCAAGACATCCCTGCTGAGAGAGCCAAGATGGAGTTTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375466.2
CDS CCA 72 bp TTGGCTCTCTCAGCAGGGATGTCTTGGAATCCACGATaGGGCTCAAGCTGTCTCACCCAGGTAAATCACAGC +
Preference number: 6 (lower is better)
Translates to: LALSAGMSWNPR*GSSCLTQVNHS
Trigger: GCTGTGATTTACCTGGGTGAGACAGCTTGAGCCCCATCGTGGATTCCAAGACATCCCTGCTGAGAGAGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332582.5
ENST00000375466.2
CDS CAA 72 bp TTGAGGTCCTTGTTGAGCAGGAAGCAGACAATTGGGTaGACGGCAGCCTGGGCGAAGCTCATCCAAACAGCA +
Preference number: 6 (lower is better)
Translates to: LRSLLSRKQTIG*TAAWAKLIQTA
Trigger: TGCTGTTTGGATGAGCTTCGCCCAGGCTGCCGTCAACCCAATTGTCTGCTTCCTGCTCAACAAGGACCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS CAA 72 bp TGGAAGCAAAAGAGCACGGCCATAAAGGCCACAATCTaGCAGCTGAGTGCACTGAAGGTCCATGAAGAGCCG +
Preference number: 6 (lower is better)
Translates to: WKQKSTAIKATI*QLSALKVHEEP
Trigger: CGGCTCTTCATGGACCTTCAGTGCACTCAGCTGCAAGATTGTGGCCTTTATGGCCGTGCTCTTTTGCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS CAA 90 bp AGTTGTCCTGCTACATTGCACCTTGGCTCTCTCAGCAGGGATGTCTaGGAATCCACGATGGGGCTCAAGCTGTCTCACCCAGGTAAATCA +
Preference number: 6 (lower is better)
Translates to: SCPATLHLGSLSRDV*ESTMGLKLSHPGKS
Trigger: TGATTTACCTGGGTGAGACAGCTTGAGCCCCATCGTGGATTCCAAGACATCCCTGCTGAGAGAGCCAAGGTGCAATGTAGCAGGACAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332582.5
CDS CAA 90 bp ACAACAAGAGCGAAACTCCATCTTGGCTCTCTCAGCAGGGATGTCTaGGAATCCACGATGGGGCTCAAGCTGTCTCACCCAGGTAAATCA +
Preference number: 6 (lower is better)
Translates to: TTRAKLHLGSLSRDV*ESTMGLKLSHPGKS
Trigger: TGATTTACCTGGGTGAGACAGCTTGAGCCCCATCGTGGATTCCAAGACATCCCTGCTGAGAGAGCCAAGATGGAGTTTCGCTCTTGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375466.2