Pregenerated sensors for GPR171 (Homo sapiens)
Ensembl gene IDs: ENSG00000174946Ensembl transcript IDs: ENST00000309180.6, ENST00000480322.1, ENST00000617554.1
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CTATGTCATGGACCTCTTTTGGATTTCAAGGATATTGCAGGATTTTACATTCGTCCTAACAATAAAGCTTaGCTTGCATTTAGAAACAGG | + |
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Preference number: 2 (lower is better) Translates to: LCHGPLLDFKDIAGFYIRPNNKA*LAFRNR Trigger: CCTGTTTCTAAATGCAAGTCAAGCTTTATTGTTAGG...ACGAATGTAAAATCCTGCAATATCCTTGAAATCCAAAAGAGGTCCATGACATAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS-3UTR TCA 90 bp | TACCTTTGGGTCTATGTCATGGACCTCTTTTGGATTTCAAGGATATTGCAGGATCAGCTGTGTGTCAGCTaGAGACAGCGGTCAATGCTG | + |
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Preference number: 4 (lower is better) Translates to: YLWVYVMDLFWISRILQDQLCVS*RQRSML Trigger: CAGCATTGACCGCTGTCTTCAGCTGACACACAGCTG...ATCCTGCAATATCCTTGAAATCCAAAAGAGGTCCATGACATAGACCCAAAGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS-3UTR TCA 90 bp | GTCTATGTCATGGACCTCTTTTGGATTTCAAGGATATTGCAGGATTTTACATTCTGGGGCTATCTTCTGTaGGCCTCAGCAAGCCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: VYVMDLFWISRILQDFTFWGYLL*ASASLA Trigger: AGCAAGGCTTGCTGAGGCTCACAGAAGATAGCCCCA...GAATGTAAAATCCTGCAATATCCTTGAAATCCAAAAGAGGTCCATGACATAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS-3UTR GCA 90 bp | ACCTTTGGGTCTATGTCATGGACCTCTTTTGGATTTCAAGGATATTGCAGGATTAGCCTCAGCAAGCCTTaGTGCAAGTCTTCAGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: TFGSMSWTSFGFQGYCRISLSKP*CKSSEK Trigger: CTTCTCTGAAGACTTGCAGCAAGGCTTGCTGAGGCT...AATCCTGCAATATCCTTGAAATCCAAAAGAGGTCCATGACATAGACCCAAAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS-3UTR CCA 90 bp | ACCTTTGGGTCTATGTCATGGACCTCTTTTGGATTTCAAGGATATTGCAGGATTAGGCAGGCTGTTACTTaGCAGTGGAATATCTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: TFGSMSWTSFGFQGYCRIRQAVT*QWNIFS Trigger: GCTGAAGATATTCCACTGCCAAGTAACAGCCTGCCT...AATCCTGCAATATCCTTGAAATCCAAAAGAGGTCCATGACATAGACCCAAAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS-3UTR TCA 90 bp | GTCTATGTCATGGACCTCTTTTGGATTTCAAGGATATTGCAGGATTTTACATTCGTCTTCAGAGAAGCATaGGCTGTTTGGTTAGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: VYVMDLFWISRILQDFTFVFREA*AVWLAA Trigger: TGCGGCTAACCAAACAGCTCATGCTTCTCTGAAGAC...GAATGTAAAATCCTGCAATATCCTTGAAATCCAAAAGAGGTCCATGACATAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS-3UTR TCA 90 bp | CTATGTCATGGACCTCTTTTGGATTTCAAGGATATTGCAGGATTTTACATTCGTAGGCAAAAGTCTCAGTaGCCTTTGAGCGGAATGCTT | + |
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Preference number: 4 (lower is better) Translates to: LCHGPLLDFKDIAGFYIRRQKSQ*PLSGML Trigger: AAGCATTCCGCTCAAAGGTCACTGAGACTTTTGCCT...ACGAATGTAAAATCCTGCAATATCCTTGAAATCCAAAAGAGGTCCATGACATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS-3UTR CCA 90 bp | ACCTTTGGGTCTATGTCATGGACCTCTTTTGGATTTCAAGGATATTGCAGGATTGCTGTTACTTGGCAGTaGAATATCTTCAGCTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: TFGSMSWTSFGFQGYCRIAVTWQ*NIFSFQ Trigger: TTGGAAGCTGAAGATATTCCACTGCCAAGTAACAGC...AATCCTGCAATATCCTTGAAATCCAAAAGAGGTCCATGACATAGACCCAAAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS-3UTR CCA 90 bp | TACCTTTGGGTCTATGTCATGGACCTCTTTTGGATTTCAAGGATATTGCAGGATACTCATGAATACCTTTaGGTCTATGTCATGGACCTC | + |
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Preference number: 4 (lower is better) Translates to: YLWVYVMDLFWISRILQDTHEYL*VYVMDL Trigger: GAGGTCCATGACATAGACCCAAAGGTATTCATGAGT...ATCCTGCAATATCCTTGAAATCCAAAAGAGGTCCATGACATAGACCCAAAGGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS-3UTR TCA 90 bp | GTCTATGTCATGGACCTCTTTTGGATTTCAAGGATATTGCAGGATTTTACATTCAAGGAACAAAGCATATaGTGTAGCCCGTGGTCACTA | + |
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Preference number: 4 (lower is better) Translates to: VYVMDLFWISRILQDFTFKEQSI*CSPWSL Trigger: TAGTGACCACGGGCTACATCATATGCTTTGTTCCTT...GAATGTAAAATCCTGCAATATCCTTGAAATCCAAAAGAGGTCCATGACATAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS-3UTR CCA 90 bp | TACCTTTGGGTCTATGTCATGGACCTCTTTTGGATTTCAAGGATATTGCAGGATCGGTTGATATCATTTTaGCAAATCCGGGTTCTTGTA | + |
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Preference number: 4 (lower is better) Translates to: YLWVYVMDLFWISRILQDRLISF*QIRVLV Trigger: TACAAGAACCCGGATTTGCCAAAATGATATCAACCG...ATCCTGCAATATCCTTGAAATCCAAAAGAGGTCCATGACATAGACCCAAAGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS-3UTR CCA 90 bp | GTCTATGTCATGGACCTCTTTTGGATTTCAAGGATATTGCAGGATTTTACATTCGTTATGACTTCTGTCTaGCTGAGGGTATACGGGATT | + |
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Preference number: 4 (lower is better) Translates to: VYVMDLFWISRILQDFTFVMTSV*LRVYGI Trigger: AATCCCGTATACCCTCAGCCAGACAGAAGTCATAAC...GAATGTAAAATCCTGCAATATCCTTGAAATCCAAAAGAGGTCCATGACATAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS-3UTR CCA 90 bp | TACCTTTGGGTCTATGTCATGGACCTCTTTTGGATTTCAAGGATATTGCAGGATGTCATGGACCTCTTTTaGATTTCAAGGATATTGCAG | + |
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Preference number: 4 (lower is better) Translates to: YLWVYVMDLFWISRILQDVMDLF*ISRILQ Trigger: CTGCAATATCCTTGAAATCCAAAAGAGGTCCATGAC...ATCCTGCAATATCCTTGAAATCCAAAAGAGGTCCATGACATAGACCCAAAGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS-3UTR GCA 90 bp | ACCTCTTTTGGATTTCAAGGATATTGCAGGATTTTACATTCGTTCAATGAGACTGTATTCGGTAGATCTTaGAGCTGTGTGTCAGCTGAA | + |
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Preference number: 4 (lower is better) Translates to: TSFGFQGYCRILHSFNETVFGRS*SCVSAE Trigger: TTCAGCTGACACACAGCTGCAAGATCTACCGAATAC...AGTCTCATTGAACGAATGTAAAATCCTGCAATATCCTTGAAATCCAAAAGAGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS-3UTR TCA 90 bp | GTCTATGTCATGGACCTCTTTTGGATTTCAAGGATATTGCAGGATTTTACATTCCCTAACAATAAAGCTTaGCTTGCATTTAGAAACAGG | + |
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Preference number: 4 (lower is better) Translates to: VYVMDLFWISRILQDFTFPNNKA*LAFRNR Trigger: CCTGTTTCTAAATGCAAGTCAAGCTTTATTGTTAGG...GAATGTAAAATCCTGCAATATCCTTGAAATCCAAAAGAGGTCCATGACATAGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS-3UTR CCA 90 bp | CTATGTCATGGACCTCTTTTGGATTTCAAGGATATTGCAGGATTTTACATTCGTTTTGGGTCTATGTCATaGACCTCTTTTGGATTTCAA | + |
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Preference number: 4 (lower is better) Translates to: LCHGPLLDFKDIAGFYIRFGSMS*TSFGFQ Trigger: TTGAAATCCAAAAGAGGTCCATGACATAGACCCAAA...ACGAATGTAAAATCCTGCAATATCCTTGAAATCCAAAAGAGGTCCATGACATAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS-3UTR CCA 90 bp | ACCTCTTTTGGATTTCAAGGATATTGCAGGATTTTACATTCGTTCAATGAGACTGGGAATCATCATATTTaGCACCATTATAAGAAGGAC | + |
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Preference number: 4 (lower is better) Translates to: TSFGFQGYCRILHSFNETGNHHI*HHYKKD Trigger: GTCCTTCTTATAATGGTGCCAAATATGATGATTCCC...AGTCTCATTGAACGAATGTAAAATCCTGCAATATCCTTGAAATCCAAAAGAGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS TCA 90 bp | TTCTGTGAGCCTCAGCAAGCCTTGCTGCAAGTCTTCAGAGAAGCATaGGCTGTTTGGTTAGCCGCAGCAGTAGCAACCCCATTGCAGGCT | + |
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Preference number: 5 (lower is better) Translates to: FCEPQQALLQVFREA*AVWLAAAVATPLQA Trigger: AGCCTGCAATGGGGTTGCTACTGCTGCGGCTAACCAAACAGCTCATGCTTCTCTGAAGACTTGCAGCAAGGCTTGCTGAGGCTCACAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS-3UTR CAA 90 bp | TACCTTTGGGTCTATGTCATGGACCTCTTTTGGATTTCAAGGATATTGCAGGATGCAGTAGCAACCCCATaGCAGGCTGCTGGCTTTACT | + |
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Preference number: 5 (lower is better) Translates to: YLWVYVMDLFWISRILQDAVATP*QAAGFT Trigger: AGTAAAGCCAGCAGCCTGCAATGGGGTTGCTACTGC...ATCCTGCAATATCCTTGAAATCCAAAAGAGGTCCATGACATAGACCCAAAGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS-3UTR CAA 90 bp | ACCTTTGGGTCTATGTCATGGACCTCTTTTGGATTTCAAGGATATTGCAGGATTGAGCCTCAGCAAGCCTaGCTGCAAGTCTTCAGAGAA | + |
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Preference number: 5 (lower is better) Translates to: TFGSMSWTSFGFQGYCRIEPQQA*LQVFRE Trigger: TTCTCTGAAGACTTGCAGCAAGGCTTGCTGAGGCTC...AATCCTGCAATATCCTTGAAATCCAAAAGAGGTCCATGACATAGACCCAAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS-3UTR CAA 90 bp | TACCTTTGGGTCTATGTCATGGACCTCTTTTGGATTTCAAGGATATTGCAGGATGGCAAATCCGGGTTCTaGTATTCGGTAGATCTTGCA | + |
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Preference number: 5 (lower is better) Translates to: YLWVYVMDLFWISRILQDGKSGF*YSVDLA Trigger: TGCAAGATCTACCGAATACAAGAACCCGGATTTGCC...ATCCTGCAATATCCTTGAAATCCAAAAGAGGTCCATGACATAGACCCAAAGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS-3UTR CAA 90 bp | ACCTCTTTTGGATTTCAAGGATATTGCAGGATTTTACATTCGTTCAATGAGACTAGAAGCATGAGCTGTTaGGTTAGCCGCAGCAGTAGC | + |
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Preference number: 5 (lower is better) Translates to: TSFGFQGYCRILHSFNETRSMSC*VSRSSS Trigger: GCTACTGCTGCGGCTAACCAAACAGCTCATGCTTCT...AGTCTCATTGAACGAATGTAAAATCCTGCAATATCCTTGAAATCCAAAAGAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS-3UTR CAA 90 bp | ACCTTTGGGTCTATGTCATGGACCTCTTTTGGATTTCAAGGATATTGCAGGATTTTGAGCGGAATGCTTTaGAGAGGTGATAGTACAGGA | + |
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Preference number: 5 (lower is better) Translates to: TFGSMSWTSFGFQGYCRILSGML*RGDSTG Trigger: TCCTGTACTATCACCTCTCAAAAGCATTCCGCTCAA...AATCCTGCAATATCCTTGAAATCCAAAAGAGGTCCATGACATAGACCCAAAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS-3UTR CAA 90 bp | TACCTTTGGGTCTATGTCATGGACCTCTTTTGGATTTCAAGGATATTGCAGGATGAACTGTTTGTCATCTaGAGGGAAAGTAAGGATGAC | + |
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Preference number: 5 (lower is better) Translates to: YLWVYVMDLFWISRILQDELFVI*RESKDD Trigger: GTCATCCTTACTTTCCCTCAAGATGACAAACAGTTC...ATCCTGCAATATCCTTGAAATCCAAAAGAGGTCCATGACATAGACCCAAAGGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS-3UTR CAA 90 bp | ACCTCTTTTGGATTTCAAGGATATTGCAGGATTTTACATTCGTTCAATGAGACTGAGGCAGGCTGTTACTaGGCAGTGGAATATCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: TSFGFQGYCRILHSFNETEAGCY*AVEYLQ Trigger: CTGAAGATATTCCACTGCCAAGTAACAGCCTGCCTC...AGTCTCATTGAACGAATGTAAAATCCTGCAATATCCTTGAAATCCAAAAGAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS-3UTR CAA 90 bp | TACCTTTGGGTCTATGTCATGGACCTCTTTTGGATTTCAAGGATATTGCAGGATACGGTTGATATCATTTaGGCAAATCCGGGTTCTTGT | + |
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Preference number: 5 (lower is better) Translates to: YLWVYVMDLFWISRILQDTVDII*ANPGSC Trigger: ACAAGAACCCGGATTTGCCAAAATGATATCAACCGT...ATCCTGCAATATCCTTGAAATCCAAAAGAGGTCCATGACATAGACCCAAAGGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS-3UTR CAA 90 bp | TACCTTTGGGTCTATGTCATGGACCTCTTTTGGATTTCAAGGATATTGCAGGATTTAGCCACACAACGGTaGATATCATTTTGGCAAATC | + |
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Preference number: 5 (lower is better) Translates to: YLWVYVMDLFWISRILQDLATQR*ISFWQI Trigger: GATTTGCCAAAATGATATCAACCGTTGTGTGGCTAA...ATCCTGCAATATCCTTGAAATCCAAAAGAGGTCCATGACATAGACCCAAAGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS-3UTR CAA 90 bp | GTCTATGTCATGGACCTCTTTTGGATTTCAAGGATATTGCAGGATTTTACATTCGTAGCCTCTTTGGCTTaGAAGAGTGAAATCCTGGTT | + |
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Preference number: 5 (lower is better) Translates to: VYVMDLFWISRILQDFTFVASLA*KSEILV Trigger: AACCAGGATTTCACTCTTCAAAGCCAAAGAGGCTAC...GAATGTAAAATCCTGCAATATCCTTGAAATCCAAAAGAGGTCCATGACATAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS-3UTR CAA 90 bp | GTCTATGTCATGGACCTCTTTTGGATTTCAAGGATATTGCAGGATTTTACATTCAGCAGTGTAGCCTCTTaGGCTTTGAAGAGTGAAATC | + |
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Preference number: 5 (lower is better) Translates to: VYVMDLFWISRILQDFTFSSVAS*ALKSEI Trigger: GATTTCACTCTTCAAAGCCAAAGAGGCTACACTGCT...GAATGTAAAATCCTGCAATATCCTTGAAATCCAAAAGAGGTCCATGACATAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS-3UTR CAA 90 bp | ACCTTTGGGTCTATGTCATGGACCTCTTTTGGATTTCAAGGATATTGCAGGATTTGTCATGGACCTCTTTaGGATTTCAAGGATATTGCA | + |
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Preference number: 5 (lower is better) Translates to: TFGSMSWTSFGFQGYCRICHGPL*DFKDIA Trigger: TGCAATATCCTTGAAATCCAAAAGAGGTCCATGACA...AATCCTGCAATATCCTTGAAATCCAAAAGAGGTCCATGACATAGACCCAAAGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS-3UTR CAA 90 bp | ACCTCTTTTGGATTTCAAGGATATTGCAGGATTTTACATTCGTTCAATGAGACTGGCTTTAAAATTATGTaGCTGGTGGGCTTTCTGGTA | + |
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Preference number: 5 (lower is better) Translates to: TSFGFQGYCRILHSFNETGFKIM*LVGFLV Trigger: TACCAGAAAGCCCACCAGCAACATAATTTTAAAGCC...AGTCTCATTGAACGAATGTAAAATCCTGCAATATCCTTGAAATCCAAAAGAGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS-3UTR CAA 90 bp | CTATGTCATGGACCTCTTTTGGATTTCAAGGATATTGCAGGATTTTACATTCGTACATTTGACTTTTCCTaGATGTCTTTGATGGGAATC | + |
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Preference number: 5 (lower is better) Translates to: LCHGPLLDFKDIAGFYIRTFDFS*MSLMGI Trigger: GATTCCCATCAAAGACATCAAGGAAAAGTCAAATGT...ACGAATGTAAAATCCTGCAATATCCTTGAAATCCAAAAGAGGTCCATGACATAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS-3UTR CAA 90 bp | CTATGTCATGGACCTCTTTTGGATTTCAAGGATATTGCAGGATTTTACATTCGTGTCACTAAAAGTATGTaGATGAGAGCCTTTTTCACA | + |
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Preference number: 5 (lower is better) Translates to: LCHGPLLDFKDIAGFYIRVTKSM*MRAFFT Trigger: TGTGAAAAAGGCTCTCATCAACATACTTTTAGTGAC...ACGAATGTAAAATCCTGCAATATCCTTGAAATCCAAAAGAGGTCCATGACATAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS TCA 72 bp | CCTCAGCAAGCCTTGCTGCAAGTCTTCAGAGAAGCATaGGCTGTTTGGTTAGCCGCAGCAGTAGCAACCCCA | + |
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Preference number: 6 (lower is better) Translates to: PQQALLQVFREA*AVWLAAAVATP Trigger: TGGGGTTGCTACTGCTGCGGCTAACCAAACAGCTCATGCTTCTCTGAAGACTTGCAGCAAGGCTTGCTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000309180.6 ENST00000480322.1 |
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| CDS CAA 72 bp | AGCCTTGCTGCAAGTCTTCAGAGAAGCATGAGCTGTTaGGTTAGCCGCAGCAGTAGCAACCCCATTGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: SLAASLQRSMSC*VSRSSSNPIAG Trigger: GCCTGCAATGGGGTTGCTACTGCTGCGGCTAACCAAACAGCTCATGCTTCTCTGAAGACTTGCAGCAAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS GCA 72 bp | ACACTGGGGCTATCTTCTGTGAGCCTCAGCAAGCCTTaGTGCAAGTCTTCAGAGAAGCATGAGCTGTTTGGT | + |
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Preference number: 6 (lower is better) Translates to: TLGLSSVSLSKP*CKSSEKHELFG Trigger: ACCAAACAGCTCATGCTTCTCTGAAGACTTGCAGCAAGGCTTGCTGAGGCTCACAGAAGATAGCCCCAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309180.6 |
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| CDS GCA 72 bp | ACTCTGGGGCTATCTTCTGTGAGCCTCAGCAAGCCTTaGTGCAAGTCTTCAGAGAAGCATGAGCTGTTTGGT | + |
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Preference number: 6 (lower is better) Translates to: TLGLSSVSLSKP*CKSSEKHELFG Trigger: ACCAAACAGCTCATGCTTCTCTGAAGACTTGCAGCAAGGCTTGCTGAGGCTCACAGAAGATAGCCCCAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480322.1 |
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| CDS GCA 72 bp | TTTTGGCAAATCCGGGTTCTTGTATTCGGTAGATCTTaGAGCTGTGTGTCAGCTGAAGACAGCGGTCAATGC | + |
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Preference number: 6 (lower is better) Translates to: FWQIRVLVFGRS*SCVSAEDSGQC Trigger: GCATTGACCGCTGTCTTCAGCTGACACACAGCTGCAAGATCTACCGAATACAAGAACCCGGATTTGCCAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000309180.6 ENST00000617554.1 |
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| CDS CAA 90 bp | AAGCACAGGTTCGACACAGCCAGGAGCAGTGTAGCCTCTTTGGCTTaGAAGAGTGAAATCCTGGTTGAGCAATCAGTTATGACTTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: KHRFDTARSSVASLA*KSEILVEQSVMTSV Trigger: GACAGAAGTCATAACTGATTGCTCAACCAGGATTTCACTCTTCAAAGCCAAAGAGGCTACACTGCTCCTGGCTGTGTCGAACCTGTGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000309180.6 ENST00000617554.1 |
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| CDS CAA 72 bp | TTCGACACAGCCAGGAGCAGTGTAGCCTCTTTGGCTTaGAAGAGTGAAATCCTGGTTGAGCAATCAGTTATG | + |
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Preference number: 6 (lower is better) Translates to: FDTARSSVASLA*KSEILVEQSVM Trigger: CATAACTGATTGCTCAACCAGGATTTCACTCTTCAAAGCCAAAGAGGCTACACTGCTCCTGGCTGTGTCGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000309180.6 ENST00000617554.1 |
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