RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPR161 (Homo sapiens)

Ensembl gene IDs: ENSG00000143147

Ensembl transcript IDs: ENST00000271357.9, ENST00000367835.1, ENST00000367836.5, ENST00000367838.5, ENST00000478868.1, ENST00000493800.1, ENST00000537209.5, ENST00000539777.5, ENST00000546300.5, ENST00000682931.1

Found 1590 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCTGGGTaGTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGC +
Preference number: 1 (lower is better)
Translates to: QVAPLRTAPKRSAPG*FLCGPVLELRVPHC
Trigger: GCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCAGGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR CCA 90 bp CCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCTaGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACA +
Preference number: 1 (lower is better)
Translates to: PAGGATEDRSEALCS*VLSLRTSPRTEGPT
Trigger: TGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCAGGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR TCA 90 bp AAGAGGCCTGTGGCTGTCCCTATTAGCACCAGCAGGTGGCGCCACTaGGGACCGCTCCGAAGCGCTCTGCTCCTGGGTGCTTTCTCTGCG +
Preference number: 1 (lower is better)
Translates to: KRPVAVPISTSRWRH*GPLRSALLLGAFSA
Trigger: CGCAGAGAAAGCACCCAGGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAGGGACAGCCACAGGCCTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 90 bp AGATGCTGCTCCTTCCCTGTGTGTGGCCAGCTGTACACAGTGACATaGTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCG +
Preference number: 1 (lower is better)
Translates to: RCCSFPVCGQLYTVT*SQGRGTGGDGNSSP
Trigger: CGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGGAAGGAGCAGCATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR CCA 90 bp GTCAGTAGGGAAGTAGGCAGGGTGGGCCAGTCTGCAAGAGGCCTGTaGCTGTCCCTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGC +
Preference number: 1 (lower is better)
Translates to: VSREVGRVGQSARGL*LSLLAPAGGATEDR
Trigger: GCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAGGGACAGCCACAGGCCTCTTGCAGACTGGCCCACCCTGCCTACTTCCCTACTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 90 bp CCACTGAGGACCGCTCCGAAGCGCTCTGCTCCTGGGTGCTTTCTCTaGGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCATCAA +
Preference number: 1 (lower is better)
Translates to: PLRTAPKRSAPGCFL*GPVLELRVPHCPHQ
Trigger: TTGATGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCAGGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 90 bp TTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTaGTCCTGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGT +
Preference number: 1 (lower is better)
Translates to: LAPAGGATEDRSEAL*SWVLSLRTSPRTEG
Trigger: ACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCAGGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 90 bp GGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTaGCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCAT +
Preference number: 1 (lower is better)
Translates to: GCFLCGPVLELRVPH*PHQPCRGTRTVACH
Trigger: ATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR TCA 90 bp CACAGTGCACGGCTGGACTCCCAGCACACTGTGAAGAGGAGGAAATaGTGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCT +
Preference number: 1 (lower is better)
Translates to: HSARLDSQHTVKRRK*CMWGSPSKPFVSGP
Trigger: AGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCATTTCCTCCTCTTCACAGTGTGCTGGGAGTCCAGCCGTGCACTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 90 bp CACAGTACACTGGGGAGGGTTCTCCTCCTGAGGCATCTGGCACAGTaGACGGCTGGACTCCCAGCACACTGTGAAGAGGAGGAAATGATG +
Preference number: 1 (lower is better)
Translates to: HSTLGRVLLLRHLAQ*TAGLPAHCEEEEMM
Trigger: CATCATTTCCTCCTCTTCACAGTGTGCTGGGAGTCCAGCCGTGCACTGTGCCAGATGCCTCAGGAGGAGAACCCTCCCCAGTGTACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 90 bp CAAATGTCCCATGTGCCACTGTCCATGTGGTCCCATCAGGAAGGCTaGAGGCCTGCCACTGCATGGCAGTTTACAGCTAAAGAGCCTGGG +
Preference number: 1 (lower is better)
Translates to: QMSHVPLSMWSHQEG*RPATAWQFTAKEPG
Trigger: CCCAGGCTCTTTAGCTGTAAACTGCCATGCAGTGGCAGGCCTGCAGCCTTCCTGATGGGACCACATGGACAGTGGCACATGGGACATTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR CCA 90 bp CCTGTGAACCTGGATGGGGTCATGCATGTAAGCAGGCTAGCCAGGTaGTCCTTGGTCACCAAGGCCGTGGACTACACGATAAGGGCAAAG +
Preference number: 1 (lower is better)
Translates to: PVNLDGVMHVSRLAR*SLVTKAVDYTIRAK
Trigger: CTTTGCCCTTATCGTGTAGTCCACGGCCTTGGTGACCAAGGACCACCTGGCTAGCCTGCTTACATGCATGACCCCATCCAGGTTCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR CCA 90 bp CTGCATATATTGTGGGTAGCATCCCTGCCCTGCCTCTTAGGGGCTTaGAGGATTAGGGATTCTGTGAACCCAAGAGCCACAGCCAGGCAG +
Preference number: 1 (lower is better)
Translates to: LHILWVASLPCLLGA*RIRDSVNPRATARQ
Trigger: CTGCCTGGCTGTGGCTCTTGGGTTCACAGAATCCCTAATCCTCCAAGCCCCTAAGAGGCAGGGCAGGGATGCTACCCACAATATATGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 90 bp AACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTaGTGTGTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTG +
Preference number: 1 (lower is better)
Translates to: NHVEAPGRSRVIRKK*CVILHSTLGRVLLL
Trigger: CAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 90 bp AAACAAGCTCTCAGGTTCATCCTTGGCTCTGCACAGCCACACCGCTaGCACCTAGTGTCTAAGGGCCTGAACTTCAGTCTTGGTGCCTCT +
Preference number: 1 (lower is better)
Translates to: KQALRFILGSAQPHR*HLVSKGLNFSLGAS
Trigger: AGAGGCACCAAGACTGAAGTTCAGGCCCTTAGACACTAGGTGGCAGCGGTGTGGCTGTGCAGAGCCAAGGATGAACCTGAGAGCTTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 90 bp CCCTGCCCCTCATGCATCTTGGTGGCTGGCATTCTATCCAGATTGTaGTCTAATGGACAGGGCAGACAAAGCCACAGAACCTTGATCTGC +
Preference number: 1 (lower is better)
Translates to: PCPSCILVAGILSRL*SNGQGRQSHRTLIC
Trigger: GCAGATCAAGGTTCTGTGGCTTTGTCTGCCCTGTCCATTAGAGCACAATCTGGATAGAATGCCAGCCACCAAGATGCATGAGGGGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 90 bp GTCAAACAGGTCAGGCCCACAGAAGGCAGTCACATGCCAGCTCACTaGCTCCTCTTTATAGCCACATCATCCTCAGTTCCTTCCAGACAG +
Preference number: 1 (lower is better)
Translates to: VKQVRPTEGSHMPAH*LLFIATSSSVPSRQ
Trigger: CTGTCTGGAAGGAACTGAGGATGATGTGGCTATAAAGAGGAGGCAGTGAGCTGGCATGTGACTGCCTTCTGTGGGCCTGACCTGTTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR TCA 90 bp AAGAGAGGTTTAACCATCCCAATCACATTCCTGTGCTTCCCCTTCTaGGATGGTGACCCTGCCCCTCATGCATCTTGGTGGCTGGCATTC +
Preference number: 1 (lower is better)
Translates to: KRGLTIPITFLCFPF*DGDPAPHASWWLAF
Trigger: GAATGCCAGCCACCAAGATGCATGAGGGGCAGGGTCACCATCTCAGAAGGGGAAGCACAGGAATGTGATTGGGATGGTTAAACCTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR CCA 90 bp GTGATCTACCTAAGATCACTCAGTGGCAATACCTGTGAACCTGGATaGGGTCATGCATGTAAGCAGGCTAGCCAGGTGGTCCTTGGTCAC +
Preference number: 1 (lower is better)
Translates to: VIYLRSLSGNTCEPG*GHACKQASQVVLGH
Trigger: GTGACCAAGGACCACCTGGCTAGCCTGCTTACATGCATGACCCCATCCAGGTTCACAGGTATTGCCACTGAGTGATCTTAGGTAGATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 90 bp TGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATACCAGATaGTGCTCCTTCCCTGTGTGTGGCCAGCTGTACACAGTGACATGC +
Preference number: 1 (lower is better)
Translates to: CRHYFQSLSWWLHTR*CSFPVCGQLYTVTC
Trigger: GCATGTCACTGTGTACAGCTGGCCACACACAGGGAAGGAGCAGCATCTGGTATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 90 bp GGGCAGACAAAGCCACAGAACCTTGATCTGCCTGCACTTCACATGTaGATGAGCAACCACACTCCAAAGTTATACAAAGGTCGGTCCGTG +
Preference number: 1 (lower is better)
Translates to: GQTKPQNLDLPALHM*MSNHTPKLYKGRSV
Trigger: CACGGACCGACCTTTGTATAACTTTGGAGTGTGGTTGCTCATGCACATGTGAAGTGCAGGCAGATCAAGGTTCTGTGGCTTTGTCTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 90 bp CCTAGAGCCCAGTCTAGTACAGTCAGGGGAACATTCTCCAACCCTTaGGTTTCAAAGCCAAGCTGCTGCACTCAAGAATGCCTACACCTA +
Preference number: 1 (lower is better)
Translates to: PRAQSSTVRGTFSNP*VSKPSCCTQECLHL
Trigger: TAGGTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAACGCAAGGGTTGGAGAATGTTCCCCTGACTGTACTAGACTGGGCTCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 90 bp GGCTGTGTTGAGCTGTGTGTGTGCTCTGTAATGTGGGACTCCCAATaGCTTCTGGGTCAAAACAACCCCAAACCTGGTATCTGTGGCATA +
Preference number: 1 (lower is better)
Translates to: GCVELCVCSVMWDSQ*LLGQNNPKPGICGI
Trigger: TATGCCACAGATACCAGGTTTGGGGTTGTTTTGACCCAGAAGGCATTGGGAGTCCCACATTACAGAGCACACACACAGCTCAACACAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR CCA 90 bp GACATGTGCACACAAAGACAGAGCTGGGCCAATAACCCAGGTTGCTaGCTGTGGGTCCAGGGCTGCTTCTATCTTATTTATACCAGGCTT +
Preference number: 1 (lower is better)
Translates to: DMCTQRQSWANNPGC*LWVQGCFYLIYTRL
Trigger: AAGCCTGGTATAAATAAGATAGAAGCAGCCCTGGACCCACAGCCAGCAACCTGGGTTATTGGCCCAGCTCTGTCTTTGTGTGCACATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR TCA 90 bp AGACAAAGCCACAGAACCTTGATCTGCCTGCACTTCACATGTGCATaGGCAACCACACTCCAAAGTTATACAAAGGTCGGTCCGTGGGTC +
Preference number: 1 (lower is better)
Translates to: RQSHRTLICLHFTCA*ATTLQSYTKVGPWV
Trigger: GACCCACGGACCGACCTTTGTATAACTTTGGAGTGTGGTTGCTCATGCACATGTGAAGTGCAGGCAGATCAAGGTTCTGTGGCTTTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR TCA 90 bp CCAGATTGTGCTCTAATGGACAGGGCAGACAAAGCCACAGAACCTTaGTCTGCCTGCACTTCACATGTGCATGAGCAACCACACTCCAAA +
Preference number: 1 (lower is better)
Translates to: PDCALMDRADKATEP*SACTSHVHEQPHSK
Trigger: TTTGGAGTGTGGTTGCTCATGCACATGTGAAGTGCAGGCAGATCAAGGTTCTGTGGCTTTGTCTGCCCTGTCCATTAGAGCACAATCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 90 bp AATGACATGTGCACACAAAGACAGAGCTGGGCCAATAACCCAGGTTaGTGGCTGTGGGTCCAGGGCTGCTTCTATCTTATTTATACCAGG +
Preference number: 1 (lower is better)
Translates to: NDMCTQRQSWANNPG*WLWVQGCFYLIYTR
Trigger: CCTGGTATAAATAAGATAGAAGCAGCCCTGGACCCACAGCCAGCAACCTGGGTTATTGGCCCAGCTCTGTCTTTGTGTGCACATGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 90 bp CTAAAGAGCCTGGGTTTAGTGGGGGCACTTGGGGTTTCGACCTTCTaGACTAACGGCAGATATCCTCAGAAATGCTCTCAGGAACTTCAA +
Preference number: 1 (lower is better)
Translates to: LKSLGLVGALGVSTF*TNGRYPQKCSQELQ
Trigger: TTGAAGTTCCTGAGAGCATTTCTGAGGATATCTGCCGTTAGTGCAGAAGGTCGAAACCCCAAGTGCCCCCACTAAACCCAGGCTCTTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR CCA 90 bp TGCACACAAAGACAGAGCTGGGCCAATAACCCAGGTTGCTGGCTGTaGGTCCAGGGCTGCTTCTATCTTATTTATACCAGGCTTGTGATA +
Preference number: 1 (lower is better)
Translates to: CTQRQSWANNPGCWL*VQGCFYLIYTRLVI
Trigger: TATCACAAGCCTGGTATAAATAAGATAGAAGCAGCCCTGGACCCACAGCCAGCAACCTGGGTTATTGGCCCAGCTCTGTCTTTGTGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR TCA 90 bp GATCTCCTTGGAATCTACCTTCTGCCAACCAAAGCAGAGAAGTCCTaGACTTATTTAGTCATGATGCAGGCCAAGGGCAGACGCAAGAGG +
Preference number: 1 (lower is better)
Translates to: DLLGIYLLPTKAEKS*TYLVMMQAKGRRKR
Trigger: CCTCTTGCGTCTGCCCTTGGCCTGCATCATGACTAAATAAGTTCAGGACTTCTCTGCTTTGGTTGGCAGAAGGTAGATTCCAAGGAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 90 bp AGGAACATTGGCACTAGATGGCCCTTGTCTTACACTCCTCAACTCTaGTTCTCCAGGAGCAGTGATCTACCTAAGATCACTCAGTGGCAA +
Preference number: 1 (lower is better)
Translates to: RNIGTRWPLSYTPQL*FSRSSDLPKITQWQ
Trigger: TTGCCACTGAGTGATCTTAGGTAGATCACTGCTCCTGGAGAAGCAGAGTTGAGGAGTGTAAGACAAGGGCCATCTAGTGCCAATGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 90 bp CAGAGCTGGGCCAATAACCCAGGTTGCTGGCTGTGGGTCCAGGGCTaGTTCTATCTTATTTATACCAGGCTTGTGATAATAGTAACTGTT +
Preference number: 1 (lower is better)
Translates to: QSWANNPGCWLWVQG*FYLIYTRLVIIVTV
Trigger: AACAGTTACTATTATCACAAGCCTGGTATAAATAAGATAGAAGCAGCCCTGGACCCACAGCCAGCAACCTGGGTTATTGGCCCAGCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 90 bp CTTTCCTCCCTGCTCTCTATTGCCTGCTCTTCCTCACCACATCCCTaGTTTTCTGAAAGTCCTTCCTTGCTGTGCAACAAATATGACAAA +
Preference number: 1 (lower is better)
Translates to: LSSLLSIACSSSPHP*FSESPSLLCNKYDK
Trigger: TTTGTCATATTTGTTGCACAGCAAGGAAGGACTTTCAGAAAAGCAGGGATGTGGTGAGGAAGAGCAGGCAATAGAGAGCAGGGAGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 90 bp GGAGAATGTCCTTTCTGGACTGTAAGGAAGGTCAAGCTGTATTTGTaGTATGATTTGGAACGTTACACCAGGCCCTGGGGATTTGATCAT +
Preference number: 1 (lower is better)
Translates to: GECPFWTVRKVKLYL*YDLERYTRPWGFDH
Trigger: ATGATCAAATCCCCAGGGCCTGGTGTAACGTTCCAAATCATAGCACAAATACAGCTTGACCTTCCTTACAGTCCAGAAAGGACATTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR CCA 90 bp AGATGCTTCTGGTCCCATCACTGGGACCTAAAAGAAGCTCACATGTaGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTTC +
Preference number: 1 (lower is better)
Translates to: RCFWSHHWDLKEAHM*SLEMLKLWTVDIIF
Trigger: GAAAATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAGTGATGGGACCAGAAGCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR TCA 90 bp ATGGAGCCATCCCTAACTCCATATTTGGAAATACCCACCTCCCTCTaGAGCCACACTTCTTTCTATAACCACGACTTGACTTTGCTAGTT +
Preference number: 1 (lower is better)
Translates to: MEPSLTPYLEIPTSL*SHTSFYNHDLTLLV
Trigger: AACTAGCAAAGTCAAGTCGTGGTTATAGAAAGAAGTGTGGCTTCAGAGGGAGGTGGGTATTTCCAAATATGGAGTTAGGGATGGCTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 90 bp CACGACTTGACTTTGCTAGTTATTAGAATCGGTATCCACAGGTCCTaGTCCCTAAATCAGAGTGCACACTTTAGTGGTATTGCCTACAGA +
Preference number: 1 (lower is better)
Translates to: HDLTLLVIRIGIHRS*SLNQSAHFSGIAYR
Trigger: TCTGTAGGCAATACCACTAAAGTGTGCACTCTGATTTAGGGAGCAGGACCTGTGGATACCGATTCTAATAACTAGCAAAGTCAAGTCGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 90 bp ATAGAAAATCTCATTTTGGCTCCCTTAGACTTCTCAAGTTCCAGATaGTACTTAGCCTTTCCTCCCTGCTCTCTATTGCCTGCTCTTCCT +
Preference number: 1 (lower is better)
Translates to: IENLILAPLDFSSSR*YLAFPPCSLLPALP
Trigger: AGGAAGAGCAGGCAATAGAGAGCAGGGAGGAAAGGCTAAGTAGCATCTGGAACTTGAGAAGTCTAAGGGAGCCAAAATGAGATTTTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR TCA 90 bp CGTGGGTCTGCTTTTGTGTTTTACCTATCTCTGCTTTACAAATCCTaGGAACACCAAAGGTCAGAGCTGGAAATGATCTTGGAGACCATT +
Preference number: 1 (lower is better)
Translates to: RGSAFVFYLSLLYKS*EHQRSELEMILETI
Trigger: AATGGTCTCCAAGATCATTTCCAGCTCTGACCTTTGGTGTTCTCAGGATTTGTAAAGCAGAGATAGGTAAAACACAAAAGCAGACCCACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR CCA 90 bp AAATTCCCTTCCATAATAACAGTTTCTCTATTTCCTGGCTGTGCTTaGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACGTCTT +
Preference number: 1 (lower is better)
Translates to: KFPSIITVSLFPGCA*HYSPIQSGKTVVRL
Trigger: AAGACGTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGCCAGGAAATAGAGAAACTGTTATTATGGAAGGGAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR TCA 90 bp TGTGATAATAGTAACTGTTGCTCTTGGGAGTGTGCCATGCAGAACTaGGGCCAGCTATTTTCATTGGTCACTCAAACATCACACATAGAA +
Preference number: 1 (lower is better)
Translates to: CDNSNCCSWECAMQN*GQLFSLVTQTSHIE
Trigger: TTCTATGTGTGATGTTTGAGTGACCAATGAAAATAGCTGGCCTCAGTTCTGCATGGCACACTCCCAAGAGCAACAGTTACTATTATCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR TCA 90 bp CCTGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCCGCGGCACAGGCGGTaGTGGGAACTCCTCCCCGGG +
Preference number: 2 (lower is better)
Translates to: PGCFLCGPVLELRVPHCPPRHRR*WELLPG
Trigger: CCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGG...CGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp CACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCTGGGTGCAGGCATCTGGCACAGTaGACGGCTGGACTCCCAGCA +
Preference number: 2 (lower is better)
Translates to: HQQVAPLRTAPKRSAPGCRHLAQ*TAGLPA
Trigger: TGCTGGGAGTCCAGCCGTGCACTGTGCCAGATGCCT...GCACCCAGGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR TCA 90 bp GGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCCCGCGGCACAGGCGGTaGTGGGAACTCCTCCCCGGG +
Preference number: 2 (lower is better)
Translates to: GPVLELRVPHCPHQPCRGPRHRR*WELLPG
Trigger: CCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGG...GCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR TCA 90 bp CGTTTCAAAGCCAAGCTGCTGCACTCAAGAATGCCTACACCTAACCAGCAACCCCCGCGGCACAGGCGGTaGTGGGAACTCCTCCCCGGG +
Preference number: 2 (lower is better)
Translates to: RFKAKLLHSRMPTPNQQPPRHRR*WELLPG
Trigger: CCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGG...GGGTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp TCCCTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCCCTGGGTGCTTTCTCTaGGGACCAGTCCTAGAACTG +
Preference number: 2 (lower is better)
Translates to: SLLAPAGGATEDRSEALCPGCFL*GPVLEL
Trigger: CAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCAGG...GCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp AGAGCTGGGCCAATAACCCAGGTTGCTGGCTGTGGGTCCAGGGCTGCTTCTATCAGGCATCTGGCACAGTaGACGGCTGGACTCCCAGCA +
Preference number: 2 (lower is better)
Translates to: RAGPITQVAGCGSRAASIRHLAQ*TAGLPA
Trigger: TGCTGGGAGTCCAGCCGTGCACTGTGCCAGATGCCT...GATAGAAGCAGCCCTGGACCCACAGCCAGCAACCTGGGTTATTGGCCCAGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp GATGGGGTCATGCATGTAAGCAGGCTAGCCAGGTGGTCCTTGGTCACCAAGGCCAGGCATCTGGCACAGTaGACGGCTGGACTCCCAGCA +
Preference number: 2 (lower is better)
Translates to: DGVMHVSRLARWSLVTKARHLAQ*TAGLPA
Trigger: TGCTGGGAGTCCAGCCGTGCACTGTGCCAGATGCCT...GGCCTTGGTGACCAAGGACCACCTGGCTAGCCTGCTTACATGCATGACCCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR TCA 90 bp CCCAACCCACAAGGACAGTATGGCTCTGCTCCTTCTTATAGGCATATATGGCTACCGCGGCACAGGCGGTaGTGGGAACTCCTCCCCGGG +
Preference number: 2 (lower is better)
Translates to: PNPQGQYGSAPSYRHIWLPRHRR*WELLPG
Trigger: CCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGG...TAGCCATATATGCCTATAAGAAGGAGCAGAGCCATACTGTCCTTGTGGGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR TCA 90 bp CTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCACTCCCAGCACACTGTaGAGAGGAGGAAATGATGCA +
Preference number: 2 (lower is better)
Translates to: LLAPAGGATEDRSEALCSTPSTL*RGGNDA
Trigger: TGCATCATTTCCTCCTCTTCACAGTGTGCTGGGAGT...GGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp TGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCACCTTGTCCTGGTGGCTaGATACCAGATGCTGCTCCT +
Preference number: 2 (lower is better)
Translates to: WVLSLRTSPRTEGPTLPAPCPGG*IPDAAP
Trigger: AGGAGCAGCATCTGGTATGCAGCCACCAGGACAAGG...TGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp GCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGAGGCATCTGGCACAGTaGACGGCTGGACTCCCAGCA +
Preference number: 2 (lower is better)
Translates to: ARINHVEAPGRSRVIRKKRHLAQ*TAGLPA
Trigger: TGCTGGGAGTCCAGCCGTGCACTGTGCCAGATGCCT...CTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp GATGGGGTCATGCATGTAAGCAGGCTAGCCAGGTGGTCCTTGGTCACCAAGGCCGCAGAGTGTCTGACCTaGACAGGTGAACCTGCCCTC +
Preference number: 2 (lower is better)
Translates to: DGVMHVSRLARWSLVTKAAECLT*TGEPAL
Trigger: GAGGGCAGGTTCACCTGTGCAGGTCAGACACTCTGC...GGCCTTGGTGACCAAGGACCACCTGGCTAGCCTGCTTACATGCATGACCCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp GATGGGGTCATGCATGTAAGCAGGCTAGCCAGGTGGTCCTTGGTCACCAAGGCCGTTCATCCTTGGCTCTaGACAGCCACACCGCTGCCA +
Preference number: 2 (lower is better)
Translates to: DGVMHVSRLARWSLVTKAVHPWL*TATPLP
Trigger: TGGCAGCGGTGTGGCTGTGCAGAGCCAAGGATGAAC...GGCCTTGGTGACCAAGGACCACCTGGCTAGCCTGCTTACATGCATGACCCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp CACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCTGGGTGCAAAGAAGCTCACATGTaGTCTCTGGAAATGCTGAAG +
Preference number: 2 (lower is better)
Translates to: HQQVAPLRTAPKRSAPGCKEAHM*SLEMLK
Trigger: CTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTT...GCACCCAGGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR TCA 90 bp TGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCAGTGAAGAGGAGGAAATaGTGCATGTGGGGGTCTCCT +
Preference number: 2 (lower is better)
Translates to: WVLSLRTSPRTEGPTLPAVKRRK*CMWGSP
Trigger: AGGAGACCCCCACATGCATCATTTCCTCCTCTTCAC...TGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR TCA 90 bp AGATTGTGCTCTAATGGACAGGGCAGACAAAGCCACAGAACCTTGATCTGCCTGAGCAGGTGGCGCCACTaGGGACCGCTCCGAAGCGCT +
Preference number: 2 (lower is better)
Translates to: RLCSNGQGRQSHRTLICLSRWRH*GPLRSA
Trigger: AGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCT...CAGGCAGATCAAGGTTCTGTGGCTTTGTCTGCCCTGTCCATTAGAGCACAATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp TGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCATGGCTGCATACCAGATaGTGCTCCTTCCCTGTGTGT +
Preference number: 2 (lower is better)
Translates to: WVLSLRTSPRTEGPTLPAWLHTR*CSFPVC
Trigger: ACACACAGGGAAGGAGCAGCATCTGGTATGCAGCCA...TGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp GAACCCAAGAGCCACAGCCAGGCAGTCACTCTGTCACTACAGGACAGAGCTGTCGGAAGGCTGCAGGCCTaGCACTGCATGGCAGTTTAC +
Preference number: 2 (lower is better)
Translates to: EPKSHSQAVTLSLQDRAVGRLQA*HCMAVY
Trigger: GTAAACTGCCATGCAGTGGCAGGCCTGCAGCCTTCC...GACAGCTCTGTCCTGTAGTGACAGAGTGACTGCCTGGCTGTGGCTCTTGGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp ATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCCCATGCCCTCCTTCCCTGTGTGTaGCCAGCTGTACACAGTGAC +
Preference number: 2 (lower is better)
Translates to: MMHVGVSFQALRLWSSHALLPCV*PAVHSD
Trigger: GTCACTGTGTACAGCTGGCCACACACAGGGAAGGAG...GGCATGGGAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp ATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCCCATGCCTGGCTGCATACCAGATaGTGCTCCTTCCCTGTGTGT +
Preference number: 2 (lower is better)
Translates to: MMHVGVSFQALRLWSSHAWLHTR*CSFPVC
Trigger: ACACACAGGGAAGGAGCAGCATCTGGTATGCAGCCA...GGCATGGGAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp GATGGGGTCATGCATGTAAGCAGGCTAGCCAGGTGGTCCTTGGTCACCAAGGCCCAGAGCCTAGCCTGGTaGTTCGCATACACTGGATGT +
Preference number: 2 (lower is better)
Translates to: DGVMHVSRLARWSLVTKAQSLAW*FAYTGC
Trigger: ACATCCAGTGTATGCGAAGCACCAGGCTAGGCTCTG...GGCCTTGGTGACCAAGGACCACCTGGCTAGCCTGCTTACATGCATGACCCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp GATGGGGTCATGCATGTAAGCAGGCTAGCCAGGTGGTCCTTGGTCACCAAGGCCGAACTTCAGTCTTGGTaGCTCTGGCCAGGGAAATGG +
Preference number: 2 (lower is better)
Translates to: DGVMHVSRLARWSLVTKAELQSW*LWPGKW
Trigger: CCATTTCCCTGGCCAGAGGCACCAAGACTGAAGTTC...GGCCTTGGTGACCAAGGACCACCTGGCTAGCCTGCTTACATGCATGACCCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp AAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGCAAGCCCTTCGTCTCTaGTCCTCCCATGCCCCACCT +
Preference number: 2 (lower is better)
Translates to: KKCCVILHSTLGRVLLLRQALRL*SSHAPP
Trigger: AGGTGGGGCATGGGAGGACCAGAGACGAAGGGCTTG...CCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp AGTCACCCTGTGACGGAGGACTCCCTCAATCCTGTGTGTCTCCACATTGAAACAGGGTCAGTGGGGGAGTaGGGGGCTGTCTCAGGATTC +
Preference number: 2 (lower is better)
Translates to: SHPVTEDSLNPVCLHIETGSVGE*GAVSGF
Trigger: GAATCCTGAGACAGCCCCCCACTCCCCCACTGACCC...TGTTTCAATGTGGAGACACACAGGATTGAGGGAGTCCTCCGTCACAGGGTGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp GGCCGTGGACTACACGATAAGGGCAAAGGAATTCAAAACAAGAGTGCCCAGCCAGGGTCAGTGGGGGAGTaGGGGGCTGTCTCAGGATTC +
Preference number: 2 (lower is better)
Translates to: GRGLHDKGKGIQNKSAQPGSVGE*GAVSGF
Trigger: GAATCCTGAGACAGCCCCCCACTCCCCCACTGACCC...TGGCTGGGCACTCTTGTTTTGAATTCCTTTGCCCTTATCGTGTAGTCCACGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR TCA 90 bp AGTCACCCTGTGACGGAGGACTCCCTCAATCCTGTGTGTCTCCACATTGAAACACTGTGCTTCCCCTTCTaGGATGGTGACCCTGCCCCT +
Preference number: 2 (lower is better)
Translates to: SHPVTEDSLNPVCLHIETLCFPF*DGDPAP
Trigger: AGGGGCAGGGTCACCATCTCAGAAGGGGAAGCACAG...TGTTTCAATGTGGAGACACACAGGATTGAGGGAGTCCTCCGTCACAGGGTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp ATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAAGAGGCAGAGGTGGGCAGGCATCTGGCACAGTaGACGGCTGGACTCCCAGCA +
Preference number: 2 (lower is better)
Translates to: IAQGPNKAEISMKEAEVGRHLAQ*TAGLPA
Trigger: TGCTGGGAGTCCAGCCGTGCACTGTGCCAGATGCCT...GCCCACCTCTGCCTCTTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp CTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCGTCATTAGGAAGAAGTaGTGTGTCATCCTTCACAGT +
Preference number: 2 (lower is better)
Translates to: LLAPAGGATEDRSEALCSVIRKK*CVILHS
Trigger: ACTGTGAAGGATGACACAGCACTTCTTCCTAATGAC...GGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp ATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAAGAGGCAGAGGTGGGCCGCTCTGCTCCTGGGTaGTTTCTCTGCGGACCAGTC +
Preference number: 2 (lower is better)
Translates to: IAQGPNKAEISMKEAEVGRSAPG*FLCGPV
Trigger: GACTGGTCCGCAGAGAAAGCACCCAGGAGCAGAGCG...GCCCACCTCTGCCTCTTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp CGTTTCAAAGCCAAGCTGCTGCACTCAAGAATGCCTACACCTAACCAGCAACCCCGCTCTGCTCCTGGGTaGTTTCTCTGCGGACCAGTC +
Preference number: 2 (lower is better)
Translates to: RFKAKLLHSRMPTPNQQPRSAPG*FLCGPV
Trigger: GACTGGTCCGCAGAGAAAGCACCCAGGAGCAGAGCG...GGGTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp TTCCTGGCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACCGCTCCGAAGCGCTCTaGTCCTGGGTGCTTTCTCTG +
Preference number: 2 (lower is better)
Translates to: FLAVLGTTVPFSPVKQWYRSEAL*SWVLSL
Trigger: CAGAGAAAGCACCCAGGAGCAGAGCGCTTCGGAGCG...GTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGCCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp AGAGCTGGGCCAATAACCCAGGTTGCTGGCTGTGGGTCCAGGGCTGCTTCTATCTTTCCTGGCTGTGCTTaGCACTACAGTCCCATTCAG +
Preference number: 2 (lower is better)
Translates to: RAGPITQVAGCGSRAASIFPGCA*HYSPIQ
Trigger: CTGAATGGGACTGTAGTGCCAAGCACAGCCAGGAAA...GATAGAAGCAGCCCTGGACCCACAGCCAGCAACCTGGGTTATTGGCCCAGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp ATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAAGAGGCAGAGGTGGGCATAGCCCAGCTAGTGTaGGGTCAGTGGGGGAGTGGG +
Preference number: 2 (lower is better)
Translates to: IAQGPNKAEISMKEAEVGIAQLV*GQWGSG
Trigger: CCCACTCCCCCACTGACCCCACACTAGCTGGGCTAT...GCCCACCTCTGCCTCTTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR CAA 90 bp AACCTGGATGGGGTCATGCATGTAAGCAGGCTAGCCAGGTGGTCCTaGGTCACCAAGGCCGTGGACTACACGATAAGGGCAAAGGAATTC +
Preference number: 2 (lower is better)
Translates to: NLDGVMHVSRLARWS*VTKAVDYTIRAKEF
Trigger: GAATTCCTTTGCCCTTATCGTGTAGTCCACGGCCTTGGTGACCAAGGACCACCTGGCTAGCCTGCTTACATGCATGACCCCATCCAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR TCA 90 bp CGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCGTGAAGAGGAGGAAATaGTGCATGTGGGGGTCTCCT +
Preference number: 2 (lower is better)
Translates to: RINHVEAPGRSRVIRKKCVKRRK*CMWGSP
Trigger: AGGAGACCCCCACATGCATCATTTCCTCCTCTTCAC...GCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp TTCCTGGCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACCTGTACACAGTGACATaGTCCCAAGGCCGCGGCACA +
Preference number: 2 (lower is better)
Translates to: FLAVLGTTVPFSPVKQWYLYTVT*SQGRGT
Trigger: TGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAG...GTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGCCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp CGTTTCAAAGCCAAGCTGCTGCACTCAAGAATGCCTACACCTAACCAGCAACCCCTGTACACAGTGACATaGTCCCAAGGCCGCGGCACA +
Preference number: 2 (lower is better)
Translates to: RFKAKLLHSRMPTPNQQPLYTVT*SQGRGT
Trigger: TGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAG...GGGTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp GATGGGGTCATGCATGTAAGCAGGCTAGCCAGGTGGTCCTTGGTCACCAAGGCCATGTGGGACTCCCAATaGCTTCTGGGTCAAAACAAC +
Preference number: 2 (lower is better)
Translates to: DGVMHVSRLARWSLVTKAMWDSQ*LLGQNN
Trigger: GTTGTTTTGACCCAGAAGGCATTGGGAGTCCCACAT...GGCCTTGGTGACCAAGGACCACCTGGCTAGCCTGCTTACATGCATGACCCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp AAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGCTCCTTCCCTGTGTGTaGCCAGCTGTACACAGTGAC +
Preference number: 2 (lower is better)
Translates to: KKCCVILHSTLGRVLLLRLLPCV*PAVHSD
Trigger: GTCACTGTGTACAGCTGGCCACACACAGGGAAGGAG...CCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp GGCCGTGGACTACACGATAAGGGCAAAGGAATTCAAAACAAGAGTGCCCAGCCAAATAACCCAGGTTGCTaGCTGTGGGTCCAGGGCTGC +
Preference number: 2 (lower is better)
Translates to: GRGLHDKGKGIQNKSAQPNNPGC*LWVQGC
Trigger: GCAGCCCTGGACCCACAGCCAGCAACCTGGGTTATT...TGGCTGGGCACTCTTGTTTTGAATTCCTTTGCCCTTATCGTGTAGTCCACGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp GGCCGTGGACTACACGATAAGGGCAAAGGAATTCAAAACAAGAGTGCCCAGCCAGTGCCACTGTCCATGTaGTCCCATCAGGAAGGCTGC +
Preference number: 2 (lower is better)
Translates to: GRGLHDKGKGIQNKSAQPVPLSM*SHQEGC
Trigger: GCAGCCTTCCTGATGGGACCACATGGACAGTGGCAC...TGGCTGGGCACTCTTGTTTTGAATTCCTTTGCCCTTATCGTGTAGTCCACGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR TCA 90 bp AGTCACCCTGTGACGGAGGACTCCCTCAATCCTGTGTGTCTCCACATTGAAACATGGAAGCAGAGTGTCTaGCCTGCACAGGTGAACCTG +
Preference number: 2 (lower is better)
Translates to: SHPVTEDSLNPVCLHIETWKQSV*PAQVNL
Trigger: CAGGTTCACCTGTGCAGGTCAGACACTCTGCTTCCA...TGTTTCAATGTGGAGACACACAGGATTGAGGGAGTCCTCCGTCACAGGGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp CTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACCTGTACACAGTGACATaGTCCCAAGGCCGCGGCACA +
Preference number: 2 (lower is better)
Translates to: LGPKRSSHVVSGNAEAVDLYTVT*SQGRGT
Trigger: TGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAG...GTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp TTCCTGGCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACCTGAGGGTCCCACACTaGCCGCATCAACCATGTAGA +
Preference number: 2 (lower is better)
Translates to: FLAVLGTTVPFSPVKQWYLRVPH*PHQPCR
Trigger: TCTACATGGTTGATGCGGGCAGTGTGGGACCCTCAG...GTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGCCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp GAACCCAAGAGCCACAGCCAGGCAGTCACTCTGTCACTACAGGACAGAGCTGTCCACAGAACCTTGATCTaGCTGCACTTCACATGTGCA +
Preference number: 2 (lower is better)
Translates to: EPKSHSQAVTLSLQDRAVHRTLI*LHFTCA
Trigger: TGCACATGTGAAGTGCAGGCAGATCAAGGTTCTGTG...GACAGCTCTGTCCTGTAGTGACAGAGTGACTGCCTGGCTGTGGCTCTTGGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp GAACCCAAGAGCCACAGCCAGGCAGTCACTCTGTCACTACAGGACAGAGCTGTCCCTGTTCCACCTCTGTaGACACTAGTTGATCAGGAA +
Preference number: 2 (lower is better)
Translates to: EPKSHSQAVTLSLQDRAVPVPPL*TLVDQE
Trigger: TTCCTGATCAACTAGTGTGCACAGAGGTGGAACAGG...GACAGCTCTGTCCTGTAGTGACAGAGTGACTGCCTGGCTGTGGCTCTTGGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp GAACCCAAGAGCCACAGCCAGGCAGTCACTCTGTCACTACAGGACAGAGCTGTCTCAAAGCCAAGCTGCTaGACTCAAGAATGCCTACAC +
Preference number: 2 (lower is better)
Translates to: EPKSHSQAVTLSLQDRAVSKPSC*TQECLH
Trigger: GTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGA...GACAGCTCTGTCCTGTAGTGACAGAGTGACTGCCTGGCTGTGGCTCTTGGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp TGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCATCAATGCTTTAGATGCTTCTaGTCCCATCACTGGGACCTA +
Preference number: 2 (lower is better)
Translates to: CFLCGPVLELRVPHCPHQCFRCF*SHHWDL
Trigger: TAGGTCCCAGTGATGGGACCAGAAGCATCTAAAGCA...TTGATGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp CCTGGTATCTGTGGCATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAACAAGCCCTTCGTCTCTaGTCCTCCCATGCCCCACCT +
Preference number: 2 (lower is better)
Translates to: PGICGIAQGPNKAEISMKQALRL*SSHAPP
Trigger: AGGTGGGGCATGGGAGGACCAGAGACGAAGGGCTTG...TTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTATGCCACAGATACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp AGAGCTGGGCCAATAACCCAGGTTGCTGGCTGTGGGTCCAGGGCTGCTTCTATCAGTTTCTCTATTTCCTaGCTGTGCTTGGCACTACAG +
Preference number: 2 (lower is better)
Translates to: RAGPITQVAGCGSRAASISFSIS*LCLALQ
Trigger: CTGTAGTGCCAAGCACAGCCAGGAAATAGAGAAACT...GATAGAAGCAGCCCTGGACCCACAGCCAGCAACCTGGGTTATTGGCCCAGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR TCA 90 bp GAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTGCCAGCTGTACACAGTaGCATGCTCCCAAGGCCGCG +
Preference number: 2 (lower is better)
Translates to: EAHMWSLEMLKLWTVDIIASCTQ*HAPKAA
Trigger: CGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGC...AATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR TCA 90 bp AGTCACCCTGTGACGGAGGACTCCCTCAATCCTGTGTGTCTCCACATTGAAACAGTGAAGAGGAGGAAATaGTGCATGTGGGGGTCTCCT +
Preference number: 2 (lower is better)
Translates to: SHPVTEDSLNPVCLHIETVKRRK*CMWGSP
Trigger: AGGAGACCCCCACATGCATCATTTCCTCCTCTTCAC...TGTTTCAATGTGGAGACACACAGGATTGAGGGAGTCCTCCGTCACAGGGTGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR TCA 90 bp GAACCCAAGAGCCACAGCCAGGCAGTCACTCTGTCACTACAGGACAGAGCTGTCCAGGCCCTGGGGATTTaGTCATCTTTGATAGTCATT +
Preference number: 2 (lower is better)
Translates to: EPKSHSQAVTLSLQDRAVQALGI*SSLIVI
Trigger: AATGACTATCAAAGATGATCAAATCCCCAGGGCCTG...GACAGCTCTGTCCTGTAGTGACAGAGTGACTGCCTGGCTGTGGCTCTTGGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp CTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACCCTTGTCCTGGTGGCTaGATACCAGATGCTGCTCCT +
Preference number: 2 (lower is better)
Translates to: LGPKRSSHVVSGNAEAVDPCPGG*IPDAAP
Trigger: AGGAGCAGCATCTGGTATGCAGCCACCAGGACAAGG...GTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp GGCCGTGGACTACACGATAAGGGCAAAGGAATTCAAAACAAGAGTGCCCAGCCATTGCTCTTGGGAGTGTaGCATGCAGAACTGAGGCCA +
Preference number: 2 (lower is better)
Translates to: GRGLHDKGKGIQNKSAQPLLLGV*HAELRP
Trigger: TGGCCTCAGTTCTGCATGGCACACTCCCAAGAGCAA...TGGCTGGGCACTCTTGTTTTGAATTCCTTTGCCCTTATCGTGTAGTCCACGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp GAACCCAAGAGCCACAGCCAGGCAGTCACTCTGTCACTACAGGACAGAGCTGTCTGTCCAAATGACATGTaGACACAAAGACAGAGCTGG +
Preference number: 2 (lower is better)
Translates to: EPKSHSQAVTLSLQDRAVCPNDM*TQRQSW
Trigger: CCAGCTCTGTCTTTGTGTGCACATGTCATTTGGACA...GACAGCTCTGTCCTGTAGTGACAGAGTGACTGCCTGGCTGTGGCTCTTGGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp AGATTGTGCTCTAATGGACAGGGCAGACAAAGCCACAGAACCTTGATCTGCCTGCAGTCCTTGTCCTGGTaGCTGCATACCAGATGCTGC +
Preference number: 2 (lower is better)
Translates to: RLCSNGQGRQSHRTLICLQSLSW*LHTRCC
Trigger: GCAGCATCTGGTATGCAGCCACCAGGACAAGGACTG...CAGGCAGATCAAGGTTCTGTGGCTTTGTCTGCCCTGTCCATTAGAGCACAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp AGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTGAAATGCTGAAGCTGTaGACTGTAGACATTATTTTC +
Preference number: 2 (lower is better)
Translates to: RVPHCPHQPCRGTRTVACEMLKL*TVDIIF
Trigger: GAAAATAATGTCTACAGTCCACAGCTTCAGCATTTC...ACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp CCTGGTATCTGTGGCATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAAGTGCCACTGTCCATGTaGTCCCATCAGGAAGGCTGC +
Preference number: 2 (lower is better)
Translates to: PGICGIAQGPNKAEISMKVPLSM*SHQEGC
Trigger: GCAGCCTTCCTGATGGGACCACATGGACAGTGGCAC...TTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTATGCCACAGATACCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR CAA 90 bp TGTCCCTTAAGCATGCAGGTTCCTTCTACTGCTCTCAGTGTGGTCTaGTCTGCCAGGCCTGTGATTCTCCCTAGGACTGTCTTTTCCTCT +
Preference number: 2 (lower is better)
Translates to: CPLSMQVPSTALSVV*SARPVILPRTVFSS
Trigger: AGAGGAAAAGACAGTCCTAGGGAGAATCACAGGCCTGGCAGACAAGACCACACTGAGAGCAGTAGAAGGAACCTGCATGCTTAAGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR TCA 90 bp GGCCGTGGACTACACGATAAGGGCAAAGGAATTCAAAACAAGAGTGCCCAGCCAACTCCCAGCACACTGTaGAGAGGAGGAAATGATGCA +
Preference number: 2 (lower is better)
Translates to: GRGLHDKGKGIQNKSAQPTPSTL*RGGNDA
Trigger: TGCATCATTTCCTCCTCTTCACAGTGTGCTGGGAGT...TGGCTGGGCACTCTTGTTTTGAATTCCTTTGCCCTTATCGTGTAGTCCACGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp CTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGGCTGCATACCAGATaGTGCTCCTTCCCTGTGTGT +
Preference number: 2 (lower is better)
Translates to: LGPKRSSHVVSGNAEAVDWLHTR*CSFPVC
Trigger: ACACACAGGGAAGGAGCAGCATCTGGTATGCAGCCA...GTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp CCTGGTATCTGTGGCATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAACCTTGTCCTGGTGGCTaGATACCAGATGCTGCTCCT +
Preference number: 2 (lower is better)
Translates to: PGICGIAQGPNKAEISMKPCPGG*IPDAAP
Trigger: AGGAGCAGCATCTGGTATGCAGCCACCAGGACAAGG...TTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTATGCCACAGATACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp GGGAATATATATAGAAAACGTGAACCACACGCAGACGTAGGAATGCCATCCAGTGCCAATAACCCAGGTTaGTGGCTGTGGGTCCAGGGC +
Preference number: 2 (lower is better)
Translates to: GNIYRKREPHADVGMPSSANNPG*WLWVQG
Trigger: GCCCTGGACCCACAGCCAGCAACCTGGGTTATTGGC...ACTGGATGGCATTCCTACGTCTGCGTGTGGTTCACGTTTTCTATATATATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp GATGGGGTCATGCATGTAAGCAGGCTAGCCAGGTGGTCCTTGGTCACCAAGGCCAAATATGGTTCTAGCTaGCAAGCATCCTTCAAGACT +
Preference number: 2 (lower is better)
Translates to: DGVMHVSRLARWSLVTKAKYGSS*QASFKT
Trigger: AGTCTTGAAGGATGCTTGGCAGCTAGAACCATATTT...GGCCTTGGTGACCAAGGACCACCTGGCTAGCCTGCTTACATGCATGACCCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp ACCAAGGGCATTTCTCAGGGAGAATGTCCTTTCTGGACTGTAAGGAAGGTCAAGGCCAAATGTCCCATGTaGCACTGTCCATGTGGTCCC +
Preference number: 2 (lower is better)
Translates to: TKGISQGECPFWTVRKVKAKCPM*HCPCGP
Trigger: GGGACCACATGGACAGTGGCACATGGGACATTTGGC...CTTGACCTTCCTTACAGTCCAGAAAGGACATTCTCCCTGAGAAATGCCCTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp GTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGCATCTGGCACAGAAAGAAGCTCACATGTaGTCTCTGGAAATGCTGAAG +
Preference number: 2 (lower is better)
Translates to: VILHSTLGRVLLLRHLAQKEAHM*SLEMLK
Trigger: CTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTT...CTGTGCCAGATGCCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp GCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACGTCTTATCTGCAAGAGGCCTGTaGCTGTCCCTATTAGCACCA +
Preference number: 2 (lower is better)
Translates to: AVLGTTVPFSPVKQWYVLSARGL*LSLLAP
Trigger: TGGTGCTAATAGGGACAGCCACAGGCCTCTTGCAGA...TAAGACGTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp ATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAAGAGGCAGAGGTGGGCGCAAGAGGAGATCAGTaGCTTCCCAAGTCATCACAG +
Preference number: 2 (lower is better)
Translates to: IAQGPNKAEISMKEAEVGARGDQ*LPKSSQ
Trigger: CTGTGATGACTTGGGAAGCCACTGATCTCCTCTTGC...GCCCACCTCTGCCTCTTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp GGCCGTGGACTACACGATAAGGGCAAAGGAATTCAAAACAAGAGTGCCCAGCCACAAACCTGGTATCTGTaGCATAGCACAGGGACCCAA +
Preference number: 2 (lower is better)
Translates to: GRGLHDKGKGIQNKSAQPQTWYL*HSTGTQ
Trigger: TTGGGTCCCTGTGCTATGCCACAGATACCAGGTTTG...TGGCTGGGCACTCTTGTTTTGAATTCCTTTGCCCTTATCGTGTAGTCCACGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR TCA 90 bp AGTCACCCTGTGACGGAGGACTCCCTCAATCCTGTGTGTCTCCACATTGAAACACACTTCACATGTGCATaGGCAACCACACTCCAAAGT +
Preference number: 2 (lower is better)
Translates to: SHPVTEDSLNPVCLHIETHFTCA*ATTLQS
Trigger: ACTTTGGAGTGTGGTTGCTCATGCACATGTGAAGTG...TGTTTCAATGTGGAGACACACAGGATTGAGGGAGTCCTCCGTCACAGGGTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR TCA 90 bp CGTTTCAAAGCCAAGCTGCTGCACTCAAGAATGCCTACACCTAACCAGCAACCCAAAGCCACAGAACCTTaGTCTGCCTGCACTTCACAT +
Preference number: 2 (lower is better)
Translates to: RFKAKLLHSRMPTPNQQPKATEP*SACTSH
Trigger: ATGTGAAGTGCAGGCAGATCAAGGTTCTGTGGCTTT...GGGTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp ATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAAGAGGCAGAGGTGGGCGGACCAAACTTCAACTaGTGTTCCAGCACAAAGGGA +
Preference number: 2 (lower is better)
Translates to: IAQGPNKAEISMKEAEVGGPNFN*CSSTKG
Trigger: TCCCTTTGTGCTGGAACAGCAGTTGAAGTTTGGTCC...GCCCACCTCTGCCTCTTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp ACCAAGGGCATTTCTCAGGGAGAATGTCCTTTCTGGACTGTAAGGAAGGTCAAGCAGAGCCTAGCCTGGTaGTTCGCATACACTGGATGT +
Preference number: 2 (lower is better)
Translates to: TKGISQGECPFWTVRKVKQSLAW*FAYTGC
Trigger: ACATCCAGTGTATGCGAAGCACCAGGCTAGGCTCTG...CTTGACCTTCCTTACAGTCCAGAAAGGACATTCTCCCTGAGAAATGCCCTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp GAACCCAAGAGCCACAGCCAGGCAGTCACTCTGTCACTACAGGACAGAGCTGTCAAATATGGTTCTAGCTaGCAAGCATCCTTCAAGACT +
Preference number: 2 (lower is better)
Translates to: EPKSHSQAVTLSLQDRAVKYGSS*QASFKT
Trigger: AGTCTTGAAGGATGCTTGGCAGCTAGAACCATATTT...GACAGCTCTGTCCTGTAGTGACAGAGTGACTGCCTGGCTGTGGCTCTTGGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp GCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACGTCTTATTTCAGTCCTTGTCCTaGTGGCTGCATACCAGATGC +
Preference number: 2 (lower is better)
Translates to: AVLGTTVPFSPVKQWYVLFQSLS*WLHTRC
Trigger: GCATCTGGTATGCAGCCACCAGGACAAGGACTGAAA...TAAGACGTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp CGTTTCAAAGCCAAGCTGCTGCACTCAAGAATGCCTACACCTAACCAGCAACCCTGCTTTAGATGCTTCTaGTCCCATCACTGGGACCTA +
Preference number: 2 (lower is better)
Translates to: RFKAKLLHSRMPTPNQQPCFRCF*SHHWDL
Trigger: TAGGTCCCAGTGATGGGACCAGAAGCATCTAAAGCA...GGGTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp ACCAAGGGCATTTCTCAGGGAGAATGTCCTTTCTGGACTGTAAGGAAGGTCAAGCTACAGAGCCTAGCCTaGTGCTTCGCATACACTGGA +
Preference number: 2 (lower is better)
Translates to: TKGISQGECPFWTVRKVKLQSLA*CFAYTG
Trigger: TCCAGTGTATGCGAAGCACCAGGCTAGGCTCTGTAG...CTTGACCTTCCTTACAGTCCAGAAAGGACATTCTCCCTGAGAAATGCCCTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp GGCCGTGGACTACACGATAAGGGCAAAGGAATTCAAAACAAGAGTGCCCAGCCAACTCCCAATGCCTTCTaGGTCAAAACAACCCCAAAC +
Preference number: 2 (lower is better)
Translates to: GRGLHDKGKGIQNKSAQPTPNAF*VKTTPN
Trigger: GTTTGGGGTTGTTTTGACCCAGAAGGCATTGGGAGT...TGGCTGGGCACTCTTGTTTTGAATTCCTTTGCCCTTATCGTGTAGTCCACGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR TCA 90 bp CGTTTCAAAGCCAAGCTGCTGCACTCAAGAATGCCTACACCTAACCAGCAACCCGAGGACCTAGAAAGGTaGCAAGATGTCCAAATGACA +
Preference number: 2 (lower is better)
Translates to: RFKAKLLHSRMPTPNQQPEDLER*QDVQMT
Trigger: TGTCATTTGGACATCTTGTCACCTTTCTAGGTCCTC...GGGTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp TCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGCTGTACACAGTGACATaGTCCCAAGGCCGCGGCACA +
Preference number: 2 (lower is better)
Translates to: SHVVSGNAEAVDCRHYFQLYTVT*SQGRGT
Trigger: TGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAG...CTGAAAATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp GACTTGACTTTGCTAGTTATTAGAATCGGTATCCACAGGTCCTGCTCCCTAAATCTGTACACAGTGACATaGTCCCAAGGCCGCGGCACA +
Preference number: 2 (lower is better)
Translates to: DLTLLVIRIGIHRSCSLNLYTVT*SQGRGT
Trigger: TGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAG...ATTTAGGGAGCAGGACCTGTGGATACCGATTCTAATAACTAGCAAAGTCAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp ATACAAAGGTCGGTCCGTGGGTCTGCTTTTGTGTTTTACCTATCTCTGCTTTACCTGAGGGTCCCACACTaGCCGCATCAACCATGTAGA +
Preference number: 2 (lower is better)
Translates to: IQRSVRGSAFVFYLSLLYLRVPH*PHQPCR
Trigger: TCTACATGGTTGATGCGGGCAGTGTGGGACCCTCAG...GTAAAGCAGAGATAGGTAAAACACAAAAGCAGACCCACGGACCGACCTTTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp GGCCGTGGACTACACGATAAGGGCAAAGGAATTCAAAACAAGAGTGCCCAGCCAGTTTCAAAGCCAAGCTaGTGCACTCAAGAATGCCTA +
Preference number: 2 (lower is better)
Translates to: GRGLHDKGKGIQNKSAQPVSKPS*CTQECL
Trigger: TAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAAC...TGGCTGGGCACTCTTGTTTTGAATTCCTTTGCCCTTATCGTGTAGTCCACGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp ACCAAGGGCATTTCTCAGGGAGAATGTCCTTTCTGGACTGTAAGGAAGGTCAAGGTTGAGCTGTGTGTGTaGTCTGTAATGTGGGACTCC +
Preference number: 2 (lower is better)
Translates to: TKGISQGECPFWTVRKVKVELCV*SVMWDS
Trigger: GGAGTCCCACATTACAGAGCACACACACAGCTCAAC...CTTGACCTTCCTTACAGTCCAGAAAGGACATTCTCCCTGAGAAATGCCCTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp ACCAAGGGCATTTCTCAGGGAGAATGTCCTTTCTGGACTGTAAGGAAGGTCAAGCACATGCCAGCTCACTaGCTCCTCTTTATAGCCACA +
Preference number: 2 (lower is better)
Translates to: TKGISQGECPFWTVRKVKHMPAH*LLFIAT
Trigger: TGTGGCTATAAAGAGGAGGCAGTGAGCTGGCATGTG...CTTGACCTTCCTTACAGTCCAGAAAGGACATTCTCCCTGAGAAATGCCCTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp CATCACTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTTTCAGTCCTTGTCCTaGTGGCTGCATACCAGATGC +
Preference number: 2 (lower is better)
Translates to: HHWDLKEAHMWSLEMLKLFQSLS*WLHTRC
Trigger: GCATCTGGTATGCAGCCACCAGGACAAGGACTGAAA...CAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp AGATTGTGCTCTAATGGACAGGGCAGACAAAGCCACAGAACCTTGATCTGCCTGTGCTTTAGATGCTTCTaGTCCCATCACTGGGACCTA +
Preference number: 2 (lower is better)
Translates to: RLCSNGQGRQSHRTLICLCFRCF*SHHWDL
Trigger: TAGGTCCCAGTGATGGGACCAGAAGCATCTAAAGCA...CAGGCAGATCAAGGTTCTGTGGCTTTGTCTGCCCTGTCCATTAGAGCACAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp GGCCGTGGACTACACGATAAGGGCAAAGGAATTCAAAACAAGAGTGCCCAGCCAACAAAGGTCGGTCCGTaGGTCTGCTTTTGTGTTTTA +
Preference number: 2 (lower is better)
Translates to: GRGLHDKGKGIQNKSAQPTKVGP*VCFCVL
Trigger: TAAAACACAAAAGCAGACCCACGGACCGACCTTTGT...TGGCTGGGCACTCTTGTTTTGAATTCCTTTGCCCTTATCGTGTAGTCCACGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp CGTTTCAAAGCCAAGCTGCTGCACTCAAGAATGCCTACACCTAACCAGCAACCCATGCATCTTGGTGGCTaGCATTCTATCCAGATTGTG +
Preference number: 2 (lower is better)
Translates to: RFKAKLLHSRMPTPNQQPMHLGG*HSIQIV
Trigger: CACAATCTGGATAGAATGCCAGCCACCAAGATGCAT...GGGTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp GGCCGTGGACTACACGATAAGGGCAAAGGAATTCAAAACAAGAGTGCCCAGCCAATGCATCTTGGTGGCTaGCATTCTATCCAGATTGTG +
Preference number: 2 (lower is better)
Translates to: GRGLHDKGKGIQNKSAQPMHLGG*HSIQIV
Trigger: CACAATCTGGATAGAATGCCAGCCACCAAGATGCAT...TGGCTGGGCACTCTTGTTTTGAATTCCTTTGCCCTTATCGTGTAGTCCACGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp CCCAACCCACAAGGACAGTATGGCTCTGCTCCTTCTTATAGGCATATATGGCTACCCACAGGCTCCATCTaGGGTTCTGCATATATTGTG +
Preference number: 2 (lower is better)
Translates to: PNPQGQYGSAPSYRHIWLPTGSI*GSAYIV
Trigger: CACAATATATGCAGAACCCCAGATGGAGCCTGTGGG...TAGCCATATATGCCTATAAGAAGGAGCAGAGCCATACTGTCCTTGTGGGTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp AGTCACCCTGTGACGGAGGACTCCCTCAATCCTGTGTGTCTCCACATTGAAACAGTCATTAGGAAGAAGTaGTGTGTCATCCTTCACAGT +
Preference number: 2 (lower is better)
Translates to: SHPVTEDSLNPVCLHIETVIRKK*CVILHS
Trigger: ACTGTGAAGGATGACACAGCACTTCTTCCTAATGAC...TGTTTCAATGTGGAGACACACAGGATTGAGGGAGTCCTCCGTCACAGGGTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp CTAAACTTCCCTTCACAGATGAGGAAACTCATAAGTAGTGACTTGTTTGAAAACCAGGGTGGGCCAGTCTaGAAGAGGCCTGTGGCTGTC +
Preference number: 2 (lower is better)
Translates to: LNFPSQMRKLISSDLFENQGGPV*KRPVAV
Trigger: GACAGCCACAGGCCTCTTGCAGACTGGCCCACCCTG...GTTTTCAAACAAGTCACTACTTATGAGTTTCCTCATCTGTGAAGGGAAGTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp CGTTTCAAAGCCAAGCTGCTGCACTCAAGAATGCCTACACCTAACCAGCAACCCATTCTATCCAGATTGTaGTCTAATGGACAGGGCAGA +
Preference number: 2 (lower is better)
Translates to: RFKAKLLHSRMPTPNQQPILSRL*SNGQGR
Trigger: TCTGCCCTGTCCATTAGAGCACAATCTGGATAGAAT...GGGTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp CCTGGTATCTGTGGCATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAAAGGTCTTTTACAAACTaGAGACCAGGGGACCAGCTA +
Preference number: 2 (lower is better)
Translates to: PGICGIAQGPNKAEISMKRSFTN*RPGDQL
Trigger: TAGCTGGTCCCCTGGTCTGCAGTTTGTAAAAGACCT...TTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTATGCCACAGATACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp ACCAAGGGCATTTCTCAGGGAGAATGTCCTTTCTGGACTGTAAGGAAGGTCAAGACATTCTCCAACCCTTaGGTTTCAAAGCCAAGCTGC +
Preference number: 2 (lower is better)
Translates to: TKGISQGECPFWTVRKVKTFSNP*VSKPSC
Trigger: GCAGCTTGGCTTTGAAACGCAAGGGTTGGAGAATGT...CTTGACCTTCCTTACAGTCCAGAAAGGACATTCTCCCTGAGAAATGCCCTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp TCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGCTCCTTCCCTGTGTGTaGCCAGCTGTACACAGTGAC +
Preference number: 2 (lower is better)
Translates to: SHVVSGNAEAVDCRHYFQLLPCV*PAVHSD
Trigger: GTCACTGTGTACAGCTGGCCACACACAGGGAAGGAG...CTGAAAATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp TTCCTGGCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACAAAGAAGCTCACATGTaGTCTCTGGAAATGCTGAAG +
Preference number: 2 (lower is better)
Translates to: FLAVLGTTVPFSPVKQWYKEAHM*SLEMLK
Trigger: CTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTT...GTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGCCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp AGATTGTGCTCTAATGGACAGGGCAGACAAAGCCACAGAACCTTGATCTGCCTGAGTTTCTCTATTTCCTaGCTGTGCTTGGCACTACAG +
Preference number: 2 (lower is better)
Translates to: RLCSNGQGRQSHRTLICLSFSIS*LCLALQ
Trigger: CTGTAGTGCCAAGCACAGCCAGGAAATAGAGAAACT...CAGGCAGATCAAGGTTCTGTGGCTTTGTCTGCCCTGTCCATTAGAGCACAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR CAA 90 bp CAGGGAGAATGTCCTTTCTGGACTGTAAGGAAGGTCAAGCTGTATTaGTGCTATGATTTGGAACGTTACACCAGGCCCTGGGGATTTGAT +
Preference number: 2 (lower is better)
Translates to: QGECPFWTVRKVKLY*CYDLERYTRPWGFD
Trigger: ATCAAATCCCCAGGGCCTGGTGTAACGTTCCAAATCATAGCACAAATACAGCTTGACCTTCCTTACAGTCCAGAAAGGACATTCTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR TCA 90 bp CCTGGTATCTGTGGCATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAATCTGTGCACACTAGTTaGTCAGGAATATGGTCCCTT +
Preference number: 2 (lower is better)
Translates to: PGICGIAQGPNKAEISMKSVHTS*SGIWSL
Trigger: AAGGGACCATATTCCTGATCAACTAGTGTGCACAGA...TTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTATGCCACAGATACCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp AGATTGTGCTCTAATGGACAGGGCAGACAAAGCCACAGAACCTTGATCTGCCTGGTCATTAGGAAGAAGTaGTGTGTCATCCTTCACAGT +
Preference number: 2 (lower is better)
Translates to: RLCSNGQGRQSHRTLICLVIRKK*CVILHS
Trigger: ACTGTGAAGGATGACACAGCACTTCTTCCTAATGAC...CAGGCAGATCAAGGTTCTGTGGCTTTGTCTGCCCTGTCCATTAGAGCACAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp GACTTGACTTTGCTAGTTATTAGAATCGGTATCCACAGGTCCTGCTCCCTAAATCTTGGGAGTGTGCCATaGAGAACTGAGGCCAGCTAT +
Preference number: 2 (lower is better)
Translates to: DLTLLVIRIGIHRSCSLNLGSVP*RTEASY
Trigger: ATAGCTGGCCTCAGTTCTGCATGGCACACTCCCAAG...ATTTAGGGAGCAGGACCTGTGGATACCGATTCTAATAACTAGCAAAGTCAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp CATGACTTAACCATACCCACGTCTTCACCATCCTCACTATATCACACTTGCACTCCTGCACTTCACATGTaGATGAGCAACCACACTCCA +
Preference number: 2 (lower is better)
Translates to: HDLTIPTSSPSSLYHTCTPALHM*MSNHTP
Trigger: TGGAGTGTGGTTGCTCATGCACATGTGAAGTGCAGG...AGTGCAAGTGTGATATAGTGAGGATGGTGAAGACGTGGGTATGGTTAAGTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp GTTGTGAATGTATCTTGTGGTCCATCCAGAGACATGTCTAATCTGCAAGTATCTGCCAAATGTCCCATGTaGCACTGTCCATGTGGTCCC +
Preference number: 2 (lower is better)
Translates to: VVNVSCGPSRDMSNLQVSAKCPM*HCPCGP
Trigger: GGGACCACATGGACAGTGGCACATGGGACATTTGGC...AGATACTTGCAGATTAGACATGTCTCTGGATGGACCACAAGATACATTCACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp CATGACTTAACCATACCCACGTCTTCACCATCCTCACTATATCACACTTGCACTCACATGCCAGCTCACTaGCTCCTCTTTATAGCCACA +
Preference number: 2 (lower is better)
Translates to: HDLTIPTSSPSSLYHTCTHMPAH*LLFIAT
Trigger: TGTGGCTATAAAGAGGAGGCAGTGAGCTGGCATGTG...AGTGCAAGTGTGATATAGTGAGGATGGTGAAGACGTGGGTATGGTTAAGTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp CCCAACCCACAAGGACAGTATGGCTCTGCTCCTTCTTATAGGCATATATGGCTATTCTCAAGTTCCAGATaGTACTTAGCCTTTCCTCCC +
Preference number: 2 (lower is better)
Translates to: PNPQGQYGSAPSYRHIWLFSSSR*YLAFPP
Trigger: GGGAGGAAAGGCTAAGTAGCATCTGGAACTTGAGAA...TAGCCATATATGCCTATAAGAAGGAGCAGAGCCATACTGTCCTTGTGGGTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR CAA 90 bp AGTCCTAAATGTGGTCTTGTCAAAACCAGAAGACACAGGACTGAGTaGTTTAAGCTAACGAGTAGCCAAATGTCCCATGTGCCACTGTCC +
Preference number: 2 (lower is better)
Translates to: SPKCGLVKTRRHRTE*FKLTSSQMSHVPLS
Trigger: GGACAGTGGCACATGGGACATTTGGCTACTCGTTAGCTTAAACAACTCAGTCCTGTGTCTTCTGGTTTTGACAAGACCACATTTAGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR TCA 90 bp ACCAAGGGCATTTCTCAGGGAGAATGTCCTTTCTGGACTGTAAGGAAGGTCAAGGACAAGATGTCCAAATaGCATGTGCACACAAAGACA +
Preference number: 2 (lower is better)
Translates to: TKGISQGECPFWTVRKVKDKMSK*HVHTKT
Trigger: TGTCTTTGTGTGCACATGTCATTTGGACATCTTGTC...CTTGACCTTCCTTACAGTCCAGAAAGGACATTCTCCCTGAGAAATGCCCTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp AATCTACCTTCTGCCAACCAAAGCAGAGAAGTCCTGAACTTATTTAGTCATGATCCTTGTCCTGGTGGCTaGATACCAGATGCTGCTCCT +
Preference number: 2 (lower is better)
Translates to: NLPSANQSREVLNLFSHDPCPGG*IPDAAP
Trigger: AGGAGCAGCATCTGGTATGCAGCCACCAGGACAAGG...ATCATGACTAAATAAGTTCAGGACTTCTCTGCTTTGGTTGGCAGAAGGTAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp GGTCACTCAAACATCACACATAGAATCTATTTAATGAGGCTTTCCCATGTGAACCCTGGGTGCTTTCTCTaGGGACCAGTCCTAGAACTG +
Preference number: 2 (lower is better)
Translates to: GHSNITHRIYLMRLSHVNPGCFL*GPVLEL
Trigger: CAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCAGG...GTTCACATGGGAAAGCCTCATTAAATAGATTCTATGTGTGATGTTTGAGTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp GGGAATATATATAGAAAACGTGAACCACACGCAGACGTAGGAATGCCATCCAGTTCTATTTCCTGGCTGTaGTTGGCACTACAGTCCCAT +
Preference number: 2 (lower is better)
Translates to: GNIYRKREPHADVGMPSSSISWL*LALQSH
Trigger: ATGGGACTGTAGTGCCAAGCACAGCCAGGAAATAGA...ACTGGATGGCATTCCTACGTCTGCGTGTGGTTCACGTTTTCTATATATATTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp GGGAATATATATAGAAAACGTGAACCACACGCAGACGTAGGAATGCCATCCAGTGTCGGTCCGTGGGTCTaGTTTTGTGTTTTACCTATC +
Preference number: 2 (lower is better)
Translates to: GNIYRKREPHADVGMPSSVGPWV*FCVLPI
Trigger: GATAGGTAAAACACAAAAGCAGACCCACGGACCGAC...ACTGGATGGCATTCCTACGTCTGCGTGTGGTTCACGTTTTCTATATATATTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp CATGACTTAACCATACCCACGTCTTCACCATCCTCACTATATCACACTTGCACTCCTGTTCCACCTCTGTaGACACTAGTTGATCAGGAA +
Preference number: 2 (lower is better)
Translates to: HDLTIPTSSPSSLYHTCTPVPPL*TLVDQE
Trigger: TTCCTGATCAACTAGTGTGCACAGAGGTGGAACAGG...AGTGCAAGTGTGATATAGTGAGGATGGTGAAGACGTGGGTATGGTTAAGTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp AGGCCAGCTATTTTCATTGGTCACTCAAACATCACACATAGAATCTATTTAATGGAAGCGCTCTGCTCCTaGGTGCTTTCTCTGCGGACC +
Preference number: 2 (lower is better)
Translates to: RPAIFIGHSNITHRIYLMEALCS*VLSLRT
Trigger: GGTCCGCAGAGAAAGCACCCAGGAGCAGAGCGCTTC...CATTAAATAGATTCTATGTGTGATGTTTGAGTGACCAATGAAAATAGCTGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp CTAAACTTCCCTTCACAGATGAGGAAACTCATAAGTAGTGACTTGTTTGAAAACCCAGGTTGCTGGCTGTaGGTCCAGGGCTGCTTCTAT +
Preference number: 2 (lower is better)
Translates to: LNFPSQMRKLISSDLFENPGCWL*VQGCFY
Trigger: ATAGAAGCAGCCCTGGACCCACAGCCAGCAACCTGG...GTTTTCAAACAAGTCACTACTTATGAGTTTCCTCATCTGTGAAGGGAAGTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp GTTGTGAATGTATCTTGTGGTCCATCCAGAGACATGTCTAATCTGCAAGTATCTGCCCCTCATGCATCTTaGTGGCTGGCATTCTATCCA +
Preference number: 2 (lower is better)
Translates to: VVNVSCGPSRDMSNLQVSAPHAS*WLAFYP
Trigger: TGGATAGAATGCCAGCCACCAAGATGCATGAGGGGC...AGATACTTGCAGATTAGACATGTCTCTGGATGGACCACAAGATACATTCACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp CATGACTTAACCATACCCACGTCTTCACCATCCTCACTATATCACACTTGCACTGGACCAGCTAACCATTaGTTTCTGCCACACAACACA +
Preference number: 2 (lower is better)
Translates to: HDLTIPTSSPSSLYHTCTGPANH*FLPHNT
Trigger: TGTGTTGTGTGGCAGAAACCAATGGTTAGCTGGTCC...AGTGCAAGTGTGATATAGTGAGGATGGTGAAGACGTGGGTATGGTTAAGTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp GTTGTGAATGTATCTTGTGGTCCATCCAGAGACATGTCTAATCTGCAAGTATCTTTTAGTGGGGGCACTTaGGGTTTCGACCTTCTGCAC +
Preference number: 2 (lower is better)
Translates to: VVNVSCGPSRDMSNLQVSFSGGT*GFDLLH
Trigger: GTGCAGAAGGTCGAAACCCCAAGTGCCCCCACTAAA...AGATACTTGCAGATTAGACATGTCTCTGGATGGACCACAAGATACATTCACAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR TCA 90 bp CATGACTTAACCATACCCACGTCTTCACCATCCTCACTATATCACACTTGCACTCTGCTTTACAAATCCTaGGAACACCAAAGGTCAGAG +
Preference number: 2 (lower is better)
Translates to: HDLTIPTSSPSSLYHTCTLLYKS*EHQRSE
Trigger: CTCTGACCTTTGGTGTTCTCAGGATTTGTAAAGCAG...AGTGCAAGTGTGATATAGTGAGGATGGTGAAGACGTGGGTATGGTTAAGTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR TCA 90 bp GGGAATATATATAGAAAACGTGAACCACACGCAGACGTAGGAATGCCATCCAGTGTGACCCAGAATAGTTaGGTTCAATCACCACAGGTA +
Preference number: 2 (lower is better)
Translates to: GNIYRKREPHADVGMPSSVTQNS*VQSPQV
Trigger: TACCTGTGGTGATTGAACTCAACTATTCTGGGTCAC...ACTGGATGGCATTCCTACGTCTGCGTGTGGTTCACGTTTTCTATATATATTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR TCA 90 bp CATGACTTAACCATACCCACGTCTTCACCATCCTCACTATATCACACTTGCACTTCTGTGCACACTAGTTaGTCAGGAATATGGTCCCTT +
Preference number: 2 (lower is better)
Translates to: HDLTIPTSSPSSLYHTCTSVHTS*SGIWSL
Trigger: AAGGGACCATATTCCTGATCAACTAGTGTGCACAGA...AGTGCAAGTGTGATATAGTGAGGATGGTGAAGACGTGGGTATGGTTAAGTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp TTAATTCTGGAAATGAAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTCCTGGGTGCTTTCTCTaGGGACCAGTCCTAGAACTG +
Preference number: 2 (lower is better)
Translates to: LILEMKHLVPALPLVFYSPGCFL*GPVLEL
Trigger: CAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCAGG...ACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTTCATTTCCAGAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp GACTTGACTTTGCTAGTTATTAGAATCGGTATCCACAGGTCCTGCTCCCTAAATGTCGGTCCGTGGGTCTaGTTTTGTGTTTTACCTATC +
Preference number: 2 (lower is better)
Translates to: DLTLLVIRIGIHRSCSLNVGPWV*FCVLPI
Trigger: GATAGGTAAAACACAAAAGCAGACCCACGGACCGAC...ATTTAGGGAGCAGGACCTGTGGATACCGATTCTAATAACTAGCAAAGTCAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp CATGACTTAACCATACCCACGTCTTCACCATCCTCACTATATCACACTTGCACTGTTTCAAAGCCAAGCTaGTGCACTCAAGAATGCCTA +
Preference number: 2 (lower is better)
Translates to: HDLTIPTSSPSSLYHTCTVSKPS*CTQECL
Trigger: TAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAAC...AGTGCAAGTGTGATATAGTGAGGATGGTGAAGACGTGGGTATGGTTAAGTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp CTAAACTTCCCTTCACAGATGAGGAAACTCATAAGTAGTGACTTGTTTGAAAACCTCCTTCCCTGTGTGTaGCCAGCTGTACACAGTGAC +
Preference number: 2 (lower is better)
Translates to: LNFPSQMRKLISSDLFENLLPCV*PAVHSD
Trigger: GTCACTGTGTACAGCTGGCCACACACAGGGAAGGAG...GTTTTCAAACAAGTCACTACTTATGAGTTTCCTCATCTGTGAAGGGAAGTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp AGATTGTGCTCTAATGGACAGGGCAGACAAAGCCACAGAACCTTGATCTGCCTGGAAATGCTGAAGCTGTaGACTGTAGACATTATTTTC +
Preference number: 2 (lower is better)
Translates to: RLCSNGQGRQSHRTLICLEMLKL*TVDIIF
Trigger: GAAAATAATGTCTACAGTCCACAGCTTCAGCATTTC...CAGGCAGATCAAGGTTCTGTGGCTTTGTCTGCCCTGTCCATTAGAGCACAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp GCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACGTCTTAGAAATGCTGAAGCTGTaGACTGTAGACATTATTTTC +
Preference number: 2 (lower is better)
Translates to: AVLGTTVPFSPVKQWYVLEMLKL*TVDIIF
Trigger: GAAAATAATGTCTACAGTCCACAGCTTCAGCATTTC...TAAGACGTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp AAGGGTAATTCACTTTCTAGAACAGCTGCCTCTCAGCAACCAGCAAGATCTCCTAAAGAAGCTCACATGTaGTCTCTGGAAATGCTGAAG +
Preference number: 2 (lower is better)
Translates to: KGNSLSRTAASQQPARSPKEAHM*SLEMLK
Trigger: CTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTT...AGGAGATCTTGCTGGTTGCTGAGAGGCAGCTGTTCTAGAAAGTGAATTACCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR CAA 90 bp ACAGAAAGACCACATAGTAGCTCCTCAAATAAGAATCAAGGAACATaGGCACTAGATGGCCCTTGTCTTACACTCCTCAACTCTGCTTCT +
Preference number: 2 (lower is better)
Translates to: TERPHSSSSNKNQGT*ALDGPCLTLLNSAS
Trigger: AGAAGCAGAGTTGAGGAGTGTAAGACAAGGGCCATCTAGTGCCAATGTTCCTTGATTCTTATTTGAGGAGCTACTATGTGGTCTTTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR TCA 90 bp AATCTACCTTCTGCCAACCAAAGCAGAGAAGTCCTGAACTTATTTAGTCATGATACTCCCAGCACACTGTaGAGAGGAGGAAATGATGCA +
Preference number: 2 (lower is better)
Translates to: NLPSANQSREVLNLFSHDTPSTL*RGGNDA
Trigger: TGCATCATTTCCTCCTCTTCACAGTGTGCTGGGAGT...ATCATGACTAAATAAGTTCAGGACTTCTCTGCTTTGGTTGGCAGAAGGTAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR TCA 90 bp GACTTGACTTTGCTAGTTATTAGAATCGGTATCCACAGGTCCTGCTCCCTAAATGAGGACCTAGAAAGGTaGCAAGATGTCCAAATGACA +
Preference number: 2 (lower is better)
Translates to: DLTLLVIRIGIHRSCSLNEDLER*QDVQMT
Trigger: TGTCATTTGGACATCTTGTCACCTTTCTAGGTCCTC...ATTTAGGGAGCAGGACCTGTGGATACCGATTCTAATAACTAGCAAAGTCAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR TCA 90 bp CCTGGTATCTGTGGCATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAAAAAGCAGAGAAGTCCTaGACTTATTTAGTCATGATG +
Preference number: 2 (lower is better)
Translates to: PGICGIAQGPNKAEISMKKAEKS*TYLVMM
Trigger: CATCATGACTAAATAAGTTCAGGACTTCTCTGCTTT...TTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTATGCCACAGATACCAGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp GGTCACTCAAACATCACACATAGAATCTATTTAATGAGGCTTTCCCATGTGAACTTTCAGTCCTTGTCCTaGTGGCTGCATACCAGATGC +
Preference number: 2 (lower is better)
Translates to: GHSNITHRIYLMRLSHVNFQSLS*WLHTRC
Trigger: GCATCTGGTATGCAGCCACCAGGACAAGGACTGAAA...GTTCACATGGGAAAGCCTCATTAAATAGATTCTATGTGTGATGTTTGAGTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp ATACAAAGGTCGGTCCGTGGGTCTGCTTTTGTGTTTTACCTATCTCTGCTTTACAAAGAAGCTCACATGTaGTCTCTGGAAATGCTGAAG +
Preference number: 2 (lower is better)
Translates to: IQRSVRGSAFVFYLSLLYKEAHM*SLEMLK
Trigger: CTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTT...GTAAAGCAGAGATAGGTAAAACACAAAAGCAGACCCACGGACCGACCTTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp GTTGTGAATGTATCTTGTGGTCCATCCAGAGACATGTCTAATCTGCAAGTATCTAGTAACTGTTGCTCTTaGGAGTGTGCCATGCAGAAC +
Preference number: 2 (lower is better)
Translates to: VVNVSCGPSRDMSNLQVSSNCCS*ECAMQN
Trigger: GTTCTGCATGGCACACTCCCAAGAGCAACAGTTACT...AGATACTTGCAGATTAGACATGTCTCTGGATGGACCACAAGATACATTCACAAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp GACTTGACTTTGCTAGTTATTAGAATCGGTATCCACAGGTCCTGCTCCCTAAATATGCATCTTGGTGGCTaGCATTCTATCCAGATTGTG +
Preference number: 2 (lower is better)
Translates to: DLTLLVIRIGIHRSCSLNMHLGG*HSIQIV
Trigger: CACAATCTGGATAGAATGCCAGCCACCAAGATGCAT...ATTTAGGGAGCAGGACCTGTGGATACCGATTCTAATAACTAGCAAAGTCAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp AGGCCAGCTATTTTCATTGGTCACTCAAACATCACACATAGAATCTATTTAATGTGGCTGCATACCAGATaGTGCTCCTTCCCTGTGTGT +
Preference number: 2 (lower is better)
Translates to: RPAIFIGHSNITHRIYLMWLHTR*CSFPVC
Trigger: ACACACAGGGAAGGAGCAGCATCTGGTATGCAGCCA...CATTAAATAGATTCTATGTGTGATGTTTGAGTGACCAATGAAAATAGCTGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp AATCTACCTTCTGCCAACCAAAGCAGAGAAGTCCTGAACTTATTTAGTCATGATTCTATTTCCTGGCTGTaGTTGGCACTACAGTCCCAT +
Preference number: 2 (lower is better)
Translates to: NLPSANQSREVLNLFSHDSISWL*LALQSH
Trigger: ATGGGACTGTAGTGCCAAGCACAGCCAGGAAATAGA...ATCATGACTAAATAAGTTCAGGACTTCTCTGCTTTGGTTGGCAGAAGGTAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp CTAAACTTCCCTTCACAGATGAGGAAACTCATAAGTAGTGACTTGTTTGAAAACCCTGCACTTCACATGTaGATGAGCAACCACACTCCA +
Preference number: 2 (lower is better)
Translates to: LNFPSQMRKLISSDLFENPALHM*MSNHTP
Trigger: TGGAGTGTGGTTGCTCATGCACATGTGAAGTGCAGG...GTTTTCAAACAAGTCACTACTTATGAGTTTCCTCATCTGTGAAGGGAAGTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp AATCTACCTTCTGCCAACCAAAGCAGAGAAGTCCTGAACTTATTTAGTCATGATGGACCAAACTTCAACTaGTGTTCCAGCACAAAGGGA +
Preference number: 2 (lower is better)
Translates to: NLPSANQSREVLNLFSHDGPNFN*CSSTKG
Trigger: TCCCTTTGTGCTGGAACAGCAGTTGAAGTTTGGTCC...ATCATGACTAAATAAGTTCAGGACTTCTCTGCTTTGGTTGGCAGAAGGTAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp CCCAACCCACAAGGACAGTATGGCTCTGCTCCTTCTTATAGGCATATATGGCTAAGATATCCTCAGAAATaGTCTCAGGAACTTCAAAAT +
Preference number: 2 (lower is better)
Translates to: PNPQGQYGSAPSYRHIWLRYPQK*SQELQN
Trigger: ATTTTGAAGTTCCTGAGAGCATTTCTGAGGATATCT...TAGCCATATATGCCTATAAGAAGGAGCAGAGCCATACTGTCCTTGTGGGTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR TCA 90 bp GACTTGACTTTGCTAGTTATTAGAATCGGTATCCACAGGTCCTGCTCCCTAAATGTGGTTTCTCCCTTTTaGAATACCAAAGAACTTGTC +
Preference number: 2 (lower is better)
Translates to: DLTLLVIRIGIHRSCSLNVVSPF*NTKELV
Trigger: GACAAGTTCTTTGGTATTTCAAAAGGGAGAAACCAC...ATTTAGGGAGCAGGACCTGTGGATACCGATTCTAATAACTAGCAAAGTCAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR TCA 90 bp AATCTACCTTCTGCCAACCAAAGCAGAGAAGTCCTGAACTTATTTAGTCATGATGGTCAGAGCTGGAAATaGTCTTGGAGACCATTCAAT +
Preference number: 2 (lower is better)
Translates to: NLPSANQSREVLNLFSHDGQSWK*SWRPFN
Trigger: ATTGAATGGTCTCCAAGATCATTTCCAGCTCTGACC...ATCATGACTAAATAAGTTCAGGACTTCTCTGCTTTGGTTGGCAGAAGGTAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR TCA 90 bp CTAAACTTCCCTTCACAGATGAGGAAACTCATAAGTAGTGACTTGTTTGAAAACAAAGCCACAGAACCTTaGTCTGCCTGCACTTCACAT +
Preference number: 2 (lower is better)
Translates to: LNFPSQMRKLISSDLFENKATEP*SACTSH
Trigger: ATGTGAAGTGCAGGCAGATCAAGGTTCTGTGGCTTT...GTTTTCAAACAAGTCACTACTTATGAGTTTCCTCATCTGTGAAGGGAAGTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR TCA 90 bp CTAAACTTCCCTTCACAGATGAGGAAACTCATAAGTAGTGACTTGTTTGAAAACATACCCACCTCCCTCTaGAGCCACACTTCTTTCTAT +
Preference number: 2 (lower is better)
Translates to: LNFPSQMRKLISSDLFENIPTSL*SHTSFY
Trigger: ATAGAAAGAAGTGTGGCTTCAGAGGGAGGTGGGTAT...GTTTTCAAACAAGTCACTACTTATGAGTTTCCTCATCTGTGAAGGGAAGTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp AATCTACCTTCTGCCAACCAAAGCAGAGAAGTCCTGAACTTATTTAGTCATGATCTGTGGGTCCAGGGCTaGTTCTATCTTATTTATACC +
Preference number: 2 (lower is better)
Translates to: NLPSANQSREVLNLFSHDLWVQG*FYLIYT
Trigger: GGTATAAATAAGATAGAAGCAGCCCTGGACCCACAG...ATCATGACTAAATAAGTTCAGGACTTCTCTGCTTTGGTTGGCAGAAGGTAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR GCA 90 bp CATGACTTAACCATACCCACGTCTTCACCATCCTCACTATATCACACTTGCACTGAGACATGTCTAATCTaGAAGTATCTAAGAGGCATA +
Preference number: 2 (lower is better)
Translates to: HDLTIPTSSPSSLYHTCTETCLI*KYLRGI
Trigger: TATGCCTCTTAGATACTTGCAGATTAGACATGTCTC...AGTGCAAGTGTGATATAGTGAGGATGGTGAAGACGTGGGTATGGTTAAGTCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp CTAAACTTCCCTTCACAGATGAGGAAACTCATAAGTAGTGACTTGTTTGAAAACGGACCAGCTAACCATTaGTTTCTGCCACACAACACA +
Preference number: 2 (lower is better)
Translates to: LNFPSQMRKLISSDLFENGPANH*FLPHNT
Trigger: TGTGTTGTGTGGCAGAAACCAATGGTTAGCTGGTCC...GTTTTCAAACAAGTCACTACTTATGAGTTTCCTCATCTGTGAAGGGAAGTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp GACTTGACTTTGCTAGTTATTAGAATCGGTATCCACAGGTCCTGCTCCCTAAATGAAATGCTGAAGCTGTaGACTGTAGACATTATTTTC +
Preference number: 2 (lower is better)
Translates to: DLTLLVIRIGIHRSCSLNEMLKL*TVDIIF
Trigger: GAAAATAATGTCTACAGTCCACAGCTTCAGCATTTC...ATTTAGGGAGCAGGACCTGTGGATACCGATTCTAATAACTAGCAAAGTCAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp CTAAACTTCCCTTCACAGATGAGGAAACTCATAAGTAGTGACTTGTTTGAAAACATGCATCTTGGTGGCTaGCATTCTATCCAGATTGTG +
Preference number: 2 (lower is better)
Translates to: LNFPSQMRKLISSDLFENMHLGG*HSIQIV
Trigger: CACAATCTGGATAGAATGCCAGCCACCAAGATGCAT...GTTTTCAAACAAGTCACTACTTATGAGTTTCCTCATCTGTGAAGGGAAGTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR CAA 90 bp TTTTCCTCCGTCTCCTGTCTCAACCCAAATTCCTTAGCCTATCTATaGCAAATATTTAGTCTCATTGGTTGTTCACTTGTTTACAGAAAG +
Preference number: 2 (lower is better)
Translates to: FSSVSCLNPNSLAYL*QIFSLIGCSLVYRK
Trigger: CTTTCTGTAAACAAGTGAACAACCAATGAGACTAAATATTTGCAATAGATAGGCTAAGGAATTTGGGTTGAGACAGGAGACGGAGGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR CAA 90 bp TGTATTTGTGCTATGATTTGGAACGTTACACCAGGCCCTGGGGATTaGATCATCTTTGATAGTCATTCCGGACAAATTAGAATGATTTTA +
Preference number: 2 (lower is better)
Translates to: CICAMIWNVTPGPGD*IIFDSHSGQIRMIL
Trigger: TAAAATCATTCTAATTTGTCCGGAATGACTATCAAAGATGATCAAATCCCCAGGGCCTGGTGTAACGTTCCAAATCATAGCACAAATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp GGTCACTCAAACATCACACATAGAATCTATTTAATGAGGCTTTCCCATGTGAACGAAATGCTGAAGCTGTaGACTGTAGACATTATTTTC +
Preference number: 2 (lower is better)
Translates to: GHSNITHRIYLMRLSHVNEMLKL*TVDIIF
Trigger: GAAAATAATGTCTACAGTCCACAGCTTCAGCATTTC...GTTCACATGGGAAAGCCTCATTAAATAGATTCTATGTGTGATGTTTGAGTGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CCA 90 bp GGTCACTCAAACATCACACATAGAATCTATTTAATGAGGCTTTCCCATGTGAACAGTCCGGTAAAACAGTaGTACGTCTTAAATGGATTT +
Preference number: 2 (lower is better)
Translates to: GHSNITHRIYLMRLSHVNSPVKQ*YVLNGF
Trigger: AAATCCATTTAAGACGTACCACTGTTTTACCGGACT...GTTCACATGGGAAAGCCTCATTAAATAGATTCTATGTGTGATGTTTGAGTGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR TCA 72 bp CACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTaGTGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCT +
Preference number: 3 (lower is better)
Translates to: HSDMLPRPRHRR*WELLPGPASQA
Trigger: AGCCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR TCA 72 bp GTGGCTGTCCCTATTAGCACCAGCAGGTGGCGCCACTaGGGACCGCTCCGAAGCGCTCTGCTCCTGGGTGCT +
Preference number: 3 (lower is better)
Translates to: VAVPISTSRWRH*GPLRSALLLGA
Trigger: AGCACCCAGGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAGGGACAGCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 72 bp GCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTaGTCCTGGGTGCTTTCTCTGCGGACCAGTCCTAGA +
Preference number: 3 (lower is better)
Translates to: AGGATEDRSEAL*SWVLSLRTSPR
Trigger: TCTAGGACTGGTCCGCAGAGAAAGCACCCAGGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR TCA 72 bp GCTGCTCCTTCCCTGTGTGTGGCCAGCTGTACACAGTaGCATGCTCCCAAGGCCGCGGCACAGGCGGTGATG +
Preference number: 3 (lower is better)
Translates to: AAPSLCVASCTQ*HAPKAAAQAVM
Trigger: CATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGGAAGGAGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR CCA 72 bp GGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCTaGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAG +
Preference number: 3 (lower is better)
Translates to: GATEDRSEALCS*VLSLRTSPRTE
Trigger: CTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCAGGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 72 bp TCCTTCCCTGTGTGTGGCCAGCTGTACACAGTGACATaGTCCCAAGGCCGCGGCACAGGCGGTGATGGGAAC +
Preference number: 3 (lower is better)
Translates to: SFPVCGQLYTVT*SQGRGTGGDGN
Trigger: GTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGGAAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 72 bp CTGGGGAGGGTTCTCCTCCTGAGGCATCTGGCACAGTaGACGGCTGGACTCCCAGCACACTGTGAAGAGGAG +
Preference number: 3 (lower is better)
Translates to: LGRVLLLRHLAQ*TAGLPAHCEEE
Trigger: CTCCTCTTCACAGTGTGCTGGGAGTCCAGCCGTGCACTGTGCCAGATGCCTCAGGAGGAGAACCCTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 72 bp ACCGCTCCGAAGCGCTCTGCTCCTGGGTGCTTTCTCTaGGGACCAGTCCTAGAACTGAGGGTCCCACACTGC +
Preference number: 3 (lower is better)
Translates to: TAPKRSAPGCFL*GPVLELRVPHC
Trigger: GCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCAGGAGCAGAGCGCTTCGGAGCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 72 bp CCACTGAGGACCGCTCCGAAGCGCTCTGCTCCTGGGTaGTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTC +
Preference number: 3 (lower is better)
Translates to: PLRTAPKRSAPG*FLCGPVLELRV
Trigger: GACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCAGGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR CCA 72 bp GAAGTAGGCAGGGTGGGCCAGTCTGCAAGAGGCCTGTaGCTGTCCCTATTAGCACCAGCAGGTGGCGCCACT +
Preference number: 3 (lower is better)
Translates to: EVGRVGQSARGL*LSLLAPAGGAT
Trigger: AGTGGCGCCACCTGCTGGTGCTAATAGGGACAGCCACAGGCCTCTTGCAGACTGGCCCACCCTGCCTACTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 72 bp CTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTaGCCGCATCAACCATGTAGAGGCACCAGGACGGTC +
Preference number: 3 (lower is better)
Translates to: LCGPVLELRVPH*PHQPCRGTRTV
Trigger: GACCGTCCTGGTGCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR TCA 72 bp CGGCTGGACTCCCAGCACACTGTGAAGAGGAGGAAATaGTGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTC +
Preference number: 3 (lower is better)
Translates to: RLDSQHTVKRRK*CMWGSPSKPFV
Trigger: GACGAAGGGCTTGGAAGGAGACCCCCACATGCATCATTTCCTCCTCTTCACAGTGTGCTGGGAGTCCAGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR TCA 72 bp AGGCCAGCGCCTGGCATCCAGGTGACCCAGAATAGTTaGGTTCAATCACCACAGGTAGCAAGACTCCAGGCC +
Preference number: 3 (lower is better)
Translates to: RPAPGIQVTQNS*VQSPQVARLQA
Trigger: GGCCTGGAGTCTTGCTACCTGTGGTGATTGAACTCAACTATTCTGGGTCACCTGGATGCCAGGCGCTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 72 bp GAATGCCATCCAGTGATGGAAGCAGAGTGTCTGACCTaGACAGGTGAACCTGCCCTCTGCTCCTTCCCACTC +
Preference number: 3 (lower is better)
Translates to: ECHPVMEAECLT*TGEPALCSFPL
Trigger: GAGTGGGAAGGAGCAGAGGGCAGGTTCACCTGTGCAGGTCAGACACTCTGCTTCCATCACTGGATGGCATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR CCA 72 bp CTGGATGGGGTCATGCATGTAAGCAGGCTAGCCAGGTaGTCCTTGGTCACCAAGGCCGTGGACTACACGATA +
Preference number: 3 (lower is better)
Translates to: LDGVMHVSRLAR*SLVTKAVDYTI
Trigger: TATCGTGTAGTCCACGGCCTTGGTGACCAAGGACCACCTGGCTAGCCTGCTTACATGCATGACCCCATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 72 bp GAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTaGTGTGTCATCCTTCACAGTACACTGGGGAGGGTT +
Preference number: 3 (lower is better)
Translates to: EAPGRSRVIRKK*CVILHSTLGRV
Trigger: AACCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CAA 90 bp GAACCCAAGAGCCACAGCCAGGCAGTCACTCTGTCACTACAGGACAGAGCTGTCAACATTCTCCAACCCTaGCGTTTCAAAGCCAAGCTG +
Preference number: 3 (lower is better)
Translates to: EPKSHSQAVTLSLQDRAVNILQP*RFKAKL
Trigger: CAGCTTGGCTTTGAAACGCAAGGGTTGGAGAATGTT...GACAGCTCTGTCCTGTAGTGACAGAGTGACTGCCTGGCTGTGGCTCTTGGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 72 bp TGCACACAAAGACAGAGCTGGGCCAATAACCCAGGTTaGTGGCTGTGGGTCCAGGGCTGCTTCTATCTTATT +
Preference number: 3 (lower is better)
Translates to: CTQRQSWANNPG*WLWVQGCFYLI
Trigger: AATAAGATAGAAGCAGCCCTGGACCCACAGCCAGCAACCTGGGTTATTGGCCCAGCTCTGTCTTTGTGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 72 bp CTGGGTTTAGTGGGGGCACTTGGGGTTTCGACCTTCTaGACTAACGGCAGATATCCTCAGAAATGCTCTCAG +
Preference number: 3 (lower is better)
Translates to: LGLVGALGVSTF*TNGRYPQKCSQ
Trigger: CTGAGAGCATTTCTGAGGATATCTGCCGTTAGTGCAGAAGGTCGAAACCCCAAGTGCCCCCACTAAACCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 72 bp AGTCCTCTGTCCCTTAAGCATGCAGGTTCCTTCTACTaGTCTCAGTGTGGTCTTGTCTGCCAGGCCTGTGAT +
Preference number: 3 (lower is better)
Translates to: SPLSLKHAGSFY*SQCGLVCQACD
Trigger: ATCACAGGCCTGGCAGACAAGACCACACTGAGAGCAGTAGAAGGAACCTGCATGCTTAAGGGACAGAGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR CCA 72 bp AGATGTCCAAATGACATGTGCACACAAAGACAGAGCTaGGCCAATAACCCAGGTTGCTGGCTGTGGGTCCAG +
Preference number: 3 (lower is better)
Translates to: RCPNDMCTQRQS*ANNPGCWLWVQ
Trigger: CTGGACCCACAGCCAGCAACCTGGGTTATTGGCCCAGCTCTGTCTTTGTGTGCACATGTCATTTGGACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR CCA 72 bp CTAAGATCACTCAGTGGCAATACCTGTGAACCTGGATaGGGTCATGCATGTAAGCAGGCTAGCCAGGTGGTC +
Preference number: 3 (lower is better)
Translates to: LRSLSGNTCEPG*GHACKQASQVV
Trigger: GACCACCTGGCTAGCCTGCTTACATGCATGACCCCATCCAGGTTCACAGGTATTGCCACTGAGTGATCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CAA 90 bp CCCAACCCACAAGGACAGTATGGCTCTGCTCCTTCTTATAGGCATATATGGCTAGCTGCACCCCAGGCATaGTGCTGCATGCTTTCCAAG +
Preference number: 3 (lower is better)
Translates to: PNPQGQYGSAPSYRHIWLAAPQA*CCMLSK
Trigger: CTTGGAAAGCATGCAGCACAATGCCTGGGGTGCAGC...TAGCCATATATGCCTATAAGAAGGAGCAGAGCCATACTGTCCTTGTGGGTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CAA 90 bp CGTTTCAAAGCCAAGCTGCTGCACTCAAGAATGCCTACACCTAACCAGCAACCCGGCATTCTATCCAGATaGTGCTCTAATGGACAGGGC +
Preference number: 3 (lower is better)
Translates to: RFKAKLLHSRMPTPNQQPGILSR*CSNGQG
Trigger: GCCCTGTCCATTAGAGCACAATCTGGATAGAATGCC...GGGTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR TCA 72 bp GCTCTAATGGACAGGGCAGACAAAGCCACAGAACCTTaGTCTGCCTGCACTTCACATGTGCATGAGCAACCA +
Preference number: 3 (lower is better)
Translates to: ALMDRADKATEP*SACTSHVHEQP
Trigger: TGGTTGCTCATGCACATGTGAAGTGCAGGCAGATCAAGGTTCTGTGGCTTTGTCTGCCCTGTCCATTAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CAA 90 bp AAGGGTAATTCACTTTCTAGAACAGCTGCCTCTCAGCAACCAGCAAGATCTCCTTGCCCCTCATGCATCTaGGTGGCTGGCATTCTATCC +
Preference number: 3 (lower is better)
Translates to: KGNSLSRTAASQQPARSPCPSCI*VAGILS
Trigger: GGATAGAATGCCAGCCACCAAGATGCATGAGGGGCA...AGGAGATCTTGCTGGTTGCTGAGAGGCAGCTGTTCTAGAAAGTGAATTACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CAA 90 bp GAACCCAAGAGCCACAGCCAGGCAGTCACTCTGTCACTACAGGACAGAGCTGTCAACCACGACTTGACTTaGCTAGTTATTAGAATCGGT +
Preference number: 3 (lower is better)
Translates to: EPKSHSQAVTLSLQDRAVNHDLT*LVIRIG
Trigger: ACCGATTCTAATAACTAGCAAAGTCAAGTCGTGGTT...GACAGCTCTGTCCTGTAGTGACAGAGTGACTGCCTGGCTGTGGCTCTTGGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CAA 90 bp GAACCCAAGAGCCACAGCCAGGCAGTCACTCTGTCACTACAGGACAGAGCTGTCCTGTGTGTCTCCACATaGAAACAGATGACTAAACTT +
Preference number: 3 (lower is better)
Translates to: EPKSHSQAVTLSLQDRAVLCVST*KQMTKL
Trigger: AAGTTTAGTCATCTGTTTCAATGTGGAGACACACAG...GACAGCTCTGTCCTGTAGTGACAGAGTGACTGCCTGGCTGTGGCTCTTGGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR TCA 72 bp GTTCAATCACCACAGGTAGCAAGACTCCAGGCCTCATaGAAGGTCTTTTACAAACTGCAGACCAGGGGACCA +
Preference number: 3 (lower is better)
Translates to: VQSPQVARLQAS*KVFYKLQTRGP
Trigger: TGGTCCCCTGGTCTGCAGTTTGTAAAAGACCTTTCATGAGGCCTGGAGTCTTGCTACCTGTGGTGATTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 72 bp ACATTCTCCAACCCTTGCGTTTCAAAGCCAAGCTGCTaGACTCAAGAATGCCTACACCTAACCAGCAACCCA +
Preference number: 3 (lower is better)
Translates to: TFSNPCVSKPSC*TQECLHLTSNP
Trigger: TGGGTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAACGCAAGGGTTGGAGAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 72 bp GGAACATTCTCCAACCCTTGCGTTTCAAAGCCAAGCTaGTGCACTCAAGAATGCCTACACCTAACCAGCAAC +
Preference number: 3 (lower is better)
Translates to: GTFSNPCVSKPS*CTQECLHLTSN
Trigger: GTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAACGCAAGGGTTGGAGAATGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 72 bp CAGTCTAGTACAGTCAGGGGAACATTCTCCAACCCTTaGGTTTCAAAGCCAAGCTGCTGCACTCAAGAATGC +
Preference number: 3 (lower is better)
Translates to: QSSTVRGTFSNP*VSKPSCCTQEC
Trigger: GCATTCTTGAGTGCAGCAGCTTGGCTTTGAAACGCAAGGGTTGGAGAATGTTCCCCTGACTGTACTAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 72 bp GACTCTGGCTTAACTTACTTTGAGACCTCAGACAATTaGCCTGGATTCTGTGTCCCCTCTCCCAACCCACAA +
Preference number: 3 (lower is better)
Translates to: DSGLTYFETSDN*PGFCVPSPNPQ
Trigger: TTGTGGGTTGGGAGAGGGGACACAGAATCCAGGGCAATTGTCTGAGGTCTCAAAGTAAGTTAAGCCAGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR CCA 72 bp ACACAAAGACAGAGCTGGGCCAATAACCCAGGTTGCTaGCTGTGGGTCCAGGGCTGCTTCTATCTTATTTAT +
Preference number: 3 (lower is better)
Translates to: TQRQSWANNPGC*LWVQGCFYLIY
Trigger: ATAAATAAGATAGAAGCAGCCCTGGACCCACAGCCAGCAACCTGGGTTATTGGCCCAGCTCTGTCTTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CAA 90 bp CCTGGTATCTGTGGCATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAAATTTCCTGGCTGTGCTaGGCACTACAGTCCCATTCA +
Preference number: 3 (lower is better)
Translates to: PGICGIAQGPNKAEISMKISWLC*ALQSHS
Trigger: TGAATGGGACTGTAGTGCCAAGCACAGCCAGGAAAT...TTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTATGCCACAGATACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CAA 90 bp ATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAAGAGGCAGAGGTGGGCAGACACAGGACTGAGTaGTTTAAGCTAACGAGTAGC +
Preference number: 3 (lower is better)
Translates to: IAQGPNKAEISMKEAEVGRHRTE*FKLTSS
Trigger: GCTACTCGTTAGCTTAAACAACTCAGTCCTGTGTCT...GCCCACCTCTGCCTCTTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 72 bp GGACCTAGAAAGGTGACAAGATGTCCAAATGACATGTaGACACAAAGACAGAGCTGGGCCAATAACCCAGGT +
Preference number: 3 (lower is better)
Translates to: GPRKVTRCPNDM*TQRQSWANNPG
Trigger: ACCTGGGTTATTGGCCCAGCTCTGTCTTTGTGTGCACATGTCATTTGGACATCTTGTCACCTTTCTAGGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 72 bp CTGCTCTCTATTGCCTGCTCTTCCTCACCACATCCCTaGTTTTCTGAAAGTCCTTCCTTGCTGTGCAACAAA +
Preference number: 3 (lower is better)
Translates to: LLSIACSSSPHP*FSESPSLLCNK
Trigger: TTTGTTGCACAGCAAGGAAGGACTTTCAGAAAAGCAGGGATGTGGTGAGGAAGAGCAGGCAATAGAGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 72 bp CCTTTCTGGACTGTAAGGAAGGTCAAGCTGTATTTGTaGTATGATTTGGAACGTTACACCAGGCCCTGGGGA +
Preference number: 3 (lower is better)
Translates to: PFWTVRKVKLYL*YDLERYTRPWG
Trigger: TCCCCAGGGCCTGGTGTAACGTTCCAAATCATAGCACAAATACAGCTTGACCTTCCTTACAGTCCAGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CAA 90 bp AGTCACCCTGTGACGGAGGACTCCCTCAATCCTGTGTGTCTCCACATTGAAACACTCACTATATCACACTaGCACTGGGGTAAAATGAGA +
Preference number: 3 (lower is better)
Translates to: SHPVTEDSLNPVCLHIETLTISH*HWGKMR
Trigger: TCTCATTTTACCCCAGTGCAAGTGTGATATAGTGAG...TGTTTCAATGTGGAGACACACAGGATTGAGGGAGTCCTCCGTCACAGGGTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR TCA 72 bp CACAGAACCTTGATCTGCCTGCACTTCACATGTGCATaGGCAACCACACTCCAAAGTTATACAAAGGTCGGT +
Preference number: 3 (lower is better)
Translates to: HRTLICLHFTCA*ATTLQSYTKVG
Trigger: ACCGACCTTTGTATAACTTTGGAGTGTGGTTGCTCATGCACATGTGAAGTGCAGGCAGATCAAGGTTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR TCA 72 bp GGAATCTACCTTCTGCCAACCAAAGCAGAGAAGTCCTaGACTTATTTAGTCATGATGCAGGCCAAGGGCAGA +
Preference number: 3 (lower is better)
Translates to: GIYLLPTKAEKS*TYLVMMQAKGR
Trigger: TCTGCCCTTGGCCTGCATCATGACTAAATAAGTTCAGGACTTCTCTGCTTTGGTTGGCAGAAGGTAGATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 72 bp CTCATTTTGGCTCCCTTAGACTTCTCAAGTTCCAGATaGTACTTAGCCTTTCCTCCCTGCTCTCTATTGCCT +
Preference number: 3 (lower is better)
Translates to: LILAPLDFSSSR*YLAFPPCSLLP
Trigger: AGGCAATAGAGAGCAGGGAGGAAAGGCTAAGTAGCATCTGGAACTTGAGAAGTCTAAGGGAGCCAAAATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CAA 90 bp CATGACTTAACCATACCCACGTCTTCACCATCCTCACTATATCACACTTGCACTACCAGCAAGATCTCCTaGGAATCTACCTTCTGCCAA +
Preference number: 3 (lower is better)
Translates to: HDLTIPTSSPSSLYHTCTTSKIS*ESTFCQ
Trigger: TTGGCAGAAGGTAGATTCCAAGGAGATCTTGCTGGT...AGTGCAAGTGTGATATAGTGAGGATGGTGAAGACGTGGGTATGGTTAAGTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR TCA 72 bp AGTAACTGTTGCTCTTGGGAGTGTGCCATGCAGAACTaGGGCCAGCTATTTTCATTGGTCACTCAAACATCA +
Preference number: 3 (lower is better)
Translates to: SNCCSWECAMQN*GQLFSLVTQTS
Trigger: TGATGTTTGAGTGACCAATGAAAATAGCTGGCCTCAGTTCTGCATGGCACACTCCCAAGAGCAACAGTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 72 bp GTGATAATAGTAACTGTTGCTCTTGGGAGTGTGCCATaGAGAACTGAGGCCAGCTATTTTCATTGGTCACTC +
Preference number: 3 (lower is better)
Translates to: VIIVTVALGSVP*RTEASYFHWSL
Trigger: GAGTGACCAATGAAAATAGCTGGCCTCAGTTCTGCATGGCACACTCCCAAGAGCAACAGTTACTATTATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 72 bp AAGCCACAGAACCTTGATCTGCCTGCACTTCACATGTaGATGAGCAACCACACTCCAAAGTTATACAAAGGT +
Preference number: 3 (lower is better)
Translates to: KPQNLDLPALHM*MSNHTPKLYKG
Trigger: ACCTTTGTATAACTTTGGAGTGTGGTTGCTCATGCACATGTGAAGTGCAGGCAGATCAAGGTTCTGTGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR TCA 72 bp ACAAATCCTGAGAACACCAAAGGTCAGAGCTGGAAATaGTCTTGGAGACCATTCAATCCAACTCCACTCTGT +
Preference number: 3 (lower is better)
Translates to: TNPENTKGQSWK*SWRPFNPTPLC
Trigger: ACAGAGTGGAGTTGGATTGAATGGTCTCCAAGATCATTTCCAGCTCTGACCTTTGGTGTTCTCAGGATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 72 bp CCTCACCACATCCCTGCTTTTCTGAAAGTCCTTCCTTaGTGTGCAACAAATATGACAAAATTCCCAAGGCAA +
Preference number: 3 (lower is better)
Translates to: PHHIPAFLKVLP*CATNMTKFPRQ
Trigger: TTGCCTTGGGAATTTTGTCATATTTGTTGCACAGCAAGGAAGGACTTTCAGAAAAGCAGGGATGTGGTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR CCA 72 bp GCAACCACACTCCAAAGTTATACAAAGGTCGGTCCGTaGGTCTGCTTTTGTGTTTTACCTATCTCTGCTTTA +
Preference number: 3 (lower is better)
Translates to: ATTLQSYTKVGP*VCFCVLPISAL
Trigger: TAAAGCAGAGATAGGTAAAACACAAAAGCAGACCCACGGACCGACCTTTGTATAACTTTGGAGTGTGGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CAA 90 bp AATCTACCTTCTGCCAACCAAAGCAGAGAAGTCCTGAACTTATTTAGTCATGATCAAAGCCACAGAACCTaGATCTGCCTGCACTTCACA +
Preference number: 3 (lower is better)
Translates to: NLPSANQSREVLNLFSHDQSHRT*ICLHFT
Trigger: TGTGAAGTGCAGGCAGATCAAGGTTCTGTGGCTTTG...ATCATGACTAAATAAGTTCAGGACTTCTCTGCTTTGGTTGGCAGAAGGTAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CAA 90 bp ACCAAGGGCATTTCTCAGGGAGAATGTCCTTTCTGGACTGTAAGGAAGGTCAAGTCATTGGTTGTTCACTaGTTTACAGAAAGACCACAT +
Preference number: 3 (lower is better)
Translates to: TKGISQGECPFWTVRKVKSLVVH*FTERPH
Trigger: ATGTGGTCTTTCTGTAAACAAGTGAACAACCAATGA...CTTGACCTTCCTTACAGTCCAGAAAGGACATTCTCCCTGAGAAATGCCCTTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR TCA 72 bp CCCTTCCTCTTGTCTTTTATAGTGGTTTCTCCCTTTTaGAATACCAAAGAACTTGTCAGTAGGGAAGTAGGC +
Preference number: 3 (lower is better)
Translates to: PFLLSFIVVSPF*NTKELVSREVG
Trigger: GCCTACTTCCCTACTGACAAGTTCTTTGGTATTTCAAAAGGGAGAAACCACTATAAAAGACAAGAGGAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 72 bp ACACTCCAAAGTTATACAAAGGTCGGTCCGTGGGTCTaGTTTTGTGTTTTACCTATCTCTGCTTTACAAATC +
Preference number: 3 (lower is better)
Translates to: TLQSYTKVGPWV*FCVLPISALQI
Trigger: GATTTGTAAAGCAGAGATAGGTAAAACACAAAAGCAGACCCACGGACCGACCTTTGTATAACTTTGGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR GCA 72 bp ACTTTGCTAGTTATTAGAATCGGTATCCACAGGTCCTaGTCCCTAAATCAGAGTGCACACTTTAGTGGTATT +
Preference number: 3 (lower is better)
Translates to: TLLVIRIGIHRS*SLNQSAHFSGI
Trigger: AATACCACTAAAGTGTGCACTCTGATTTAGGGAGCAGGACCTGTGGATACCGATTCTAATAACTAGCAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CAA 90 bp AGGCCAGCTATTTTCATTGGTCACTCAAACATCACACATAGAATCTATTTAATGATTTCCTGGCTGTGCTaGGCACTACAGTCCCATTCA +
Preference number: 3 (lower is better)
Translates to: RPAIFIGHSNITHRIYLMISWLC*ALQSHS
Trigger: TGAATGGGACTGTAGTGCCAAGCACAGCCAGGAAAT...CATTAAATAGATTCTATGTGTGATGTTTGAGTGACCAATGAAAATAGCTGGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CAA 90 bp CTAAACTTCCCTTCACAGATGAGGAAACTCATAAGTAGTGACTTGTTTGAAAACAACCACGACTTGACTTaGCTAGTTATTAGAATCGGT +
Preference number: 3 (lower is better)
Translates to: LNFPSQMRKLISSDLFENNHDLT*LVIRIG
Trigger: ACCGATTCTAATAACTAGCAAAGTCAAGTCGTGGTT...GTTTTCAAACAAGTCACTACTTATGAGTTTCCTCATCTGTGAAGGGAAGTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR-3UTR CAA 90 bp CTAAACTTCCCTTCACAGATGAGGAAACTCATAAGTAGTGACTTGTTTGAAAACAATGAGATAAAGCATTaGGAAGTACCTAACACAGCA +
Preference number: 3 (lower is better)
Translates to: LNFPSQMRKLISSDLFENNEIKH*EVPNTA
Trigger: TGCTGTGTTAGGTACTTCCAAATGCTTTATCTCATT...GTTTTCAAACAAGTCACTACTTATGAGTTTCCTCATCTGTGAAGGGAAGTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCCCGCGGCACAGGCGGTaGTGGGAACTCCTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: APKAAAQAVMGTPPRASLPRHRR*WELLPG
Trigger: CCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGG...GAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCTGCAGCCGCGGCACAGGCGGTaGTGGGAACTCCTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: RGTGGDGNSSPGQPLRLQPRHRR*WELLPG
Trigger: CCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGG...CTGCAGCCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCCGCGGCACAGGCGGTaGTGGGAACTCCTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: QGRGTGGDGNSSPGQPLRPRHRR*WELLPG
Trigger: CCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGG...CCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCTGCAGAGCCCCACGGCACCCTaGGGCCCTCATCTCTGCTCG +
Preference number: 4 (lower is better)
Translates to: RGTGGDGNSSPGQPLRLQSPTAP*GPHLCS
Trigger: CGAGCAGAGATGAGGGCCTCAGGGTGCCGTGGGGCT...CTGCAGCCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCCACCTCGGCGTGGGGTaGGCAGAGCATGCTGGACGA +
Preference number: 4 (lower is better)
Translates to: APKAAAQAVMGTPPRASLHLGVG*AEHAGR
Trigger: TCGTCCAGCATGCTCTGCCCACCCCACGCCGAGGTG...GAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367838.5
ENST00000537209.5
CDS-3UTR TCA 90 bp CAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGGCACCTTGCGTGCCTTaGCCCTGGCCACGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: QGRGTGGDGNSSPGQPLRAPCVP*PWPRGR
Trigger: TCTTCCGCGTGGCCAGGGTCAAGGCACGCAAGGTGC...CCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCTGCAGGGGCCTCAGAGGCGATaGCAACCATGTAGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: RGTGGDGNSSPGQPLRLQGPQRR*QPCRGP
Trigger: GGGGCCCCTACATGGTTGTCATCGCCTCTGAGGCCC...CTGCAGCCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCTCCCCACACCCTTTaGCCTGAGCGGGACGTGGAG +
Preference number: 4 (lower is better)
Translates to: APKAAAQAVMGTPPRASLSPHTL*PERDVE
Trigger: CTCCACGTCCCGCTCAGGGCAAAGGGTGTGGGGAGA...GAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367836.5
ENST00000367838.5
ENST00000539777.5
CDS-3UTR TCA 90 bp TCCCTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCCCGCGGCACAGGCGGTaGTGGGAACTCCTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: SLLAPAGGATEDRSEALCPRHRR*WELLPG
Trigger: CCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGG...GCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGGCCAGCTGTACACAGTaGCATGCTCCCAAGGCCGCG +
Preference number: 4 (lower is better)
Translates to: QGRGTGGDGNSSPGQPLRASCTQ*HAPKAA
Trigger: CGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGC...CCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CCTGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGGGCGGAGGACAGCCCTaGCCTCCGAGAGGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: PGCFLCGPVLELRVPHCPGGGQP*PPRGAR
Trigger: CCGCGCCCCTCTCGGAGGTCAGGGCTGTCCTCCGCC...CGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539777.5
CDS-3UTR GCA 90 bp GCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCAGGCATCTGGCACAGTaGACGGCTGGACTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: APKAAAQAVMGTPPRASLRHLAQ*TAGLPA
Trigger: TGCTGGGAGTCCAGCCGTGCACTGTGCCAGATGCCT...GAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCGTAGCATCCCTGCCCTaGCTCTTAGGGGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: APKAAAQAVMGTPPRASLVASLP*LLGAWR
Trigger: CCTCCAAGCCCCTAAGAGGCAGGGCAGGGATGCTAC...GAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGAGCGGTCGATGGCAATaGCCCCGAGGGTTAGCATGC +
Preference number: 4 (lower is better)
Translates to: QGRGTGGDGNSSPGQPLRSGRWQ*PRGLAC
Trigger: GCATGCTAACCCTCGGGGTCATTGCCATCGACCGCT...CCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367838.5
ENST00000537209.5
CDS-3UTR TCA 90 bp CAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGTTCCTCCCGGTCCTCTaGGCATCCTCCTCCACGATG +
Preference number: 4 (lower is better)
Translates to: QGRGTGGDGNSSPGQPLRFLPVL*ASSSTM
Trigger: CATCGTGGAGGAGGATGCTCAGAGGACCGGGAGGAA...CCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCTGGGTGCGCCAGCTGTACACAGTaGCATGCTCCCAAGGCCGCG +
Preference number: 4 (lower is better)
Translates to: HQQVAPLRTAPKRSAPGCASCTQ*HAPKAA
Trigger: CGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGC...GCACCCAGGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCTGCAGCCCCTTCTGAGATGGTaGCCCTGCCCCTCATGCATC +
Preference number: 4 (lower is better)
Translates to: RGTGGDGNSSPGQPLRLQPLLRW*PCPSCI
Trigger: GATGCATGAGGGGCAGGGTCACCATCTCAGAAGGGG...CTGCAGCCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCGGCAGGAGAATTGCTTaGACCCAGGAGCCGAGATCG +
Preference number: 4 (lower is better)
Translates to: APKAAAQAVMGTPPRASLGRRIA*TQEPRS
Trigger: CGATCTCGGCTCCTGGGTTCAAGCAATTCTCCTGCC...GAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367835.1
ENST00000367838.5
CDS-3UTR GCA 90 bp CGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCTGCAGCATCCATCTGCCTTCTaGCAGGCTCTGTCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: RGTGGDGNSSPGQPLRLQHPSAF*QALSRA
Trigger: AGCCCGGGACAGAGCCTGGCAGAAGGCAGATGGATG...CTGCAGCCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000537209.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCGGAAGGCTGCAGGCCTaGCACTGCATGGCAGTTTAC +
Preference number: 4 (lower is better)
Translates to: APKAAAQAVMGTPPRASLGRLQA*HCMAVY
Trigger: GTAAACTGCCATGCAGTGGCAGGCCTGCAGCCTTCC...GAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGGAAGCGCTCTGCTCCTaGGTGCTTTCTCTGCGGACC +
Preference number: 4 (lower is better)
Translates to: QGRGTGGDGNSSPGQPLREALCS*VLSLRT
Trigger: GGTCCGCAGAGAAAGCACCCAGGAGCAGAGCGCTTC...CCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CCTGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGGGACGTGGAGTCTCTTaGCCCCAGGGGGCGCGGCCC +
Preference number: 4 (lower is better)
Translates to: PGCFLCGPVLELRVPHCPGRGVS*PQGARP
Trigger: GGGCCGCGCCCCCTGGGGCCAAGAGACTCCACGTCC...CGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367838.5
ENST00000539777.5
CDS-3UTR TCA 90 bp CAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCATCCTCCTCCACGATaGCGACTGTGCCACAGTGCA +
Preference number: 4 (lower is better)
Translates to: QGRGTGGDGNSSPGQPLRHPPPR*RLCHSA
Trigger: TGCACTGTGGCACAGTCGTCATCGTGGAGGAGGATG...CCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCTGCAGATTCCTCCTGCTGCCTaGAGAGGAGGTGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: RGTGGDGNSSPGQPLRLQIPPAA*RGGGGA
Trigger: AGCACCTCCACCTCCTCTTCAGGCAGCAGGAGGAAT...CTGCAGCCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCAGCCGAGGGGCGTaGCCGCTTCTCCCCACACCC +
Preference number: 4 (lower is better)
Translates to: QLYTVTCSQGRGTGGDGNSSRGA*PLLPTP
Trigger: GGGTGTGGGGAGAAGCGGTCACGCCCCTCGGCTGGA...GTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367836.5
ENST00000367838.5
ENST00000539777.5
CDS-3UTR TCA 90 bp CTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCGGGGAGACAGCGCCCTaGGTCCCGGCTGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LYTVTCSQGRGTGGDGNSGETAP*VPAGRR
Trigger: CCTTCTCCCAGCCGGGACTCAGGGCGCTGTCTCCCC...GGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367836.5
CDS-3UTR GCA 90 bp CGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCTGCAGAACAGGTCTTCACACTaGTGCCCTGCACTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: RGTGGDGNSSPGQPLRLQNRSSH*CPALPR
Trigger: CCGAGGGAGTGCAGGGCAGCAGTGTGAAGACCTGTT...CTGCAGCCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000537209.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGAGGCATTCCTCCTGCTaGCTGAAGAGGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: QGRGTGGDGNSSPGQPLRRHSSC*LKRRWR
Trigger: CCTCCACCTCCTCTTCAGGCAGCAGGAGGAATGCCT...CCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGGGCTCACAAGAGTTCTaGTGCCTCGGCGGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: GQLYTVTCSQGRGTGGDGGSQEF*CLGGPR
Trigger: TCGGGGGCCGCCGAGGCAGCAGAACTCTTGTGAGCC...CCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCCCTTGTCCTGGTGGCTaGATACCAGATGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: APKAAAQAVMGTPPRASLPCPGG*IPDAAP
Trigger: AGGAGCAGCATCTGGTATGCAGCCACCAGGACAAGG...GAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCCCTGGGTGCTTTCTCTaGGGACCAGTCCTAGAACTG +
Preference number: 4 (lower is better)
Translates to: APKAAAQAVMGTPPRASLPGCFL*GPVLEL
Trigger: CAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCAGG...GAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCTGGGTGCTCCCATCAGGAAGGCTaGAGGCCTGCCACTGCATGG +
Preference number: 4 (lower is better)
Translates to: HQQVAPLRTAPKRSAPGCSHQEG*RPATAW
Trigger: CCATGCAGTGGCAGGCCTGCAGCCTTCCTGATGGGA...GCACCCAGGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCCAGAAGGCAGTCACATaGCAGCTCACTGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: APKAAAQAVMGTPPRASLQKAVT*QLTASS
Trigger: AGAGGAGGCAGTGAGCTGGCATGTGACTGCCTTCTG...GAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCTGCAGGGGCTTTGCACTGGTTaGCCGAGTAGACCACACCCT +
Preference number: 4 (lower is better)
Translates to: RGTGGDGNSSPGQPLRLQGLCTG*PSRPHP
Trigger: AGGGTGTGGTCTACTCGGCCAACCAGTGCAAAGCCC...CTGCAGCCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCCGGCCTCAATGGCTTTaGCCAAGCTTGCTGCGTAAC +
Preference number: 4 (lower is better)
Translates to: APKAAAQAVMGTPPRASLRPQWL*PSLLRN
Trigger: GTTACGCAGCAAGCTTGGCCAAAGCCATTGAGGCCG...GAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCTGCAGCGCCGTGGACGATCCTaGTATCGCCTTTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RGTGGDGNSSPGQPLRLQRRGRS*YRLCCS
Trigger: TGAGCAGCAAAGGCGATACCAGGATCGTCCACGGCG...CTGCAGCCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367835.1
ENST00000537209.5
CDS-3UTR CCA 90 bp TCCCTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCGCCCTGAGCGGGACGTaGAGTCTCTTGGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SLLAPAGGATEDRSEALCALSGT*SLLAPG
Trigger: CCCTGGGGCCAAGAGACTCCACGTCCCGCTCAGGGC...GCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367838.5
ENST00000539777.5
CDS-3UTR TCA 90 bp CACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCTGGGTGCCAGCCCGGTTCCCTGTaGTCTTCATGGGGTACACCA +
Preference number: 4 (lower is better)
Translates to: HQQVAPLRTAPKRSAPGCQPGSL*SSWGTP
Trigger: TGGTGTACCCCATGAAGATCACAGGGAACCGGGCTG...GCACCCAGGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGGTCAAACTCCACGGATaGCCAACCAAACAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: QGRGTGGDGNSSPGQPLRVKLHG*PTKQGW
Trigger: CCACCCCTGTTTGGTTGGTCATCCGTGGAGTTTGAC...CCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCTGCAGCATAGCACACCAGCATaGCCAGAAAGGGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: RGTGGDGNSSPGQPLRLQHSTPA*PERGRG
Trigger: CCCTCTTCCCCTTTCTGGTCATGCTGGTGTGCTATG...CTGCAGCCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGGCACCTTGCGTGCCTTaGCCCTGGCCACGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: PCVWPAVHSDMLPRPRHRAPCVP*PWPRGR
Trigger: TCTTCCGCGTGGCCAGGGTCAAGGCACGCAAGGTGC...CCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCTGGGTGCATTCCTCCTGCTGCCTaGAGAGGAGGTGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: HQQVAPLRTAPKRSAPGCIPPAA*RGGGGA
Trigger: AGCACCTCCACCTCCTCTTCAGGCAGCAGGAGGAAT...GCACCCAGGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCTGGGTGCGGTGGGCAAGTGCAGTaGGAGGGAGGGTTGTCATCA +
Preference number: 4 (lower is better)
Translates to: HQQVAPLRTAPKRSAPGCGGQVQ*EGGLSS
Trigger: TGATGACAACCCTCCCTCTCACTGCACTTGCCCACC...GCACCCAGGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCAGCCCCACGGCACCCTaGGGCCCTCATCTCTGCTCG +
Preference number: 4 (lower is better)
Translates to: LYTVTCSQGRGTGGDGNSSPTAP*GPHLCS
Trigger: CGAGCAGAGATGAGGGCCTCAGGGTGCCGTGGGGCT...GGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp ATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCCCATGCCCCGCGGCACAGGCGGTaGTGGGAACTCCTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: MMHVGVSFQALRLWSSHAPRHRR*WELLPG
Trigger: CCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGG...GGCATGGGAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GATGGGGTCATGCATGTAAGCAGGCTAGCCAGGTGGTCCTTGGTCACCAAGGCCCCGCGGCACAGGCGGTaGTGGGAACTCCTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: DGVMHVSRLARWSLVTKAPRHRR*WELLPG
Trigger: CCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGG...GGCCTTGGTGACCAAGGACCACCTGGCTAGCCTGCTTACATGCATGACCCCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACAGCAGGTGGCGCCACTaGGGACCGCTCCGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: QLYTVTCSQGRGTGGDGNSRWRH*GPLRSA
Trigger: AGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCT...GTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCTGGGTGCACGACTGTGCCACAGTaGACCTTGCGTGCCTTGACC +
Preference number: 4 (lower is better)
Translates to: HQQVAPLRTAPKRSAPGCTTVPQ*TLRALT
Trigger: GGTCAAGGCACGCAAGGTGCACTGTGGCACAGTCGT...GCACCCAGGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCTGGGTGCAAGAGGAGGTGGAGGTaGTGGAGTTCTTCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: HQQVAPLRTAPKRSAPGCKRRWR*WSSSSR
Trigger: CCGGGAGGAAGAACTCCAGCACCTCCACCTCCTCTT...GCACCCAGGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCTGGGTGCAGGCATTCCTCCTGCTaGCTGAAGAGGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: HQQVAPLRTAPKRSAPGCRHSSC*LKRRWR
Trigger: CCTCCACCTCCTCTTCAGGCAGCAGGAGGAATGCCT...GCACCCAGGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGCAGGGGCTGTCCACCTaGCATGAGCGCAGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: GQLYTVTCSQGRGTGGDGQGLST*HERSEV
Trigger: CACCTCACTGCGCTCATGGCAGGTGGACAGCCCCTG...CCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGCCCCGGGACAGTCCGTaGTGTAACCAAGACCCCTGG +
Preference number: 4 (lower is better)
Translates to: GQLYTVTCSQGRGTGGDGPRDSP*CNQDPW
Trigger: CCAGGGGTCTTGGTTACAGCACGGACTGTCCCGGGG...CCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCTGCAGCCTTCTTCGATGCTCTaGAACTGCAGCCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: RGTGGDGNSSPGQPLRLQPSSML*NCSLWL
Trigger: GAGCCAGAGGCTGCAGTTGCAGAGCATCGAAGAAGG...CTGCAGCCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCTGGGTGCCTGTACACAGTGACATaGTCCCAAGGCCGCGGCACA +
Preference number: 4 (lower is better)
Translates to: HQQVAPLRTAPKRSAPGCLYTVT*SQGRGT
Trigger: TGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAG...GCACCCAGGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCGAACTTCAGTCTTGGTaGCTCTGGCCAGGGAAATGG +
Preference number: 4 (lower is better)
Translates to: APKAAAQAVMGTPPRASLELQSW*LWPGKW
Trigger: CCATTTCCCTGGCCAGAGGCACCAAGACTGAAGTTC...GAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGTCTCCCCACACCCTTTaGCCTGAGCGGGACGTGGAG +
Preference number: 4 (lower is better)
Translates to: GQLYTVTCSQGRGTGGDGSPHTL*PERDVE
Trigger: CTCCACGTCCCGCTCAGGGCAAAGGGTGTGGGGAGA...CCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367836.5
ENST00000367838.5
ENST00000539777.5
CDS-3UTR CCA 90 bp TCCCTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCCACCTCGGCGTGGGGTaGGCAGAGCATGCTGGACGA +
Preference number: 4 (lower is better)
Translates to: SLLAPAGGATEDRSEALCHLGVG*AEHAGR
Trigger: TCGTCCAGCATGCTCTGCCCACCCCACGCCGAGGTG...GCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
CDS-3UTR CCA 90 bp GCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCATGATGGCGATGAACTaGGTGATGATGACGCCCCCT +
Preference number: 4 (lower is better)
Translates to: APKAAAQAVMGTPPRASLMMAMN*VMMTPP
Trigger: AGGGGGCGTCATCATCACCCAGTTCATCGCCATCAT...GAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367838.5
ENST00000537209.5
CDS-3UTR CCA 90 bp GCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCCATTCCCTGCGGATaGAGCTCGTCACCACAAAAG +
Preference number: 4 (lower is better)
Translates to: APKAAAQAVMGTPPRASLSIPCG*SSSPQK
Trigger: CTTTTGTGGTGACGAGCTCCATCCGCAGGGAATGGA...GAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367838.5
ENST00000537209.5
CDS-3UTR CCA 90 bp CGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCTGCAGTGCCTGAAGAGGAGGTaGAGGTGCTGGAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: RGTGGDGNSSPGQPLRLQCLKRR*RCWSSS
Trigger: GGAAGAACTCCAGCACCTCCACCTCCTCTTCAGGCA...CTGCAGCCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGTGCCTGAAGAGGAGGTaGAGGTGCTGGAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: QGRGTGGDGNSSPGQPLRCLKRR*RCWSSS
Trigger: GGAAGAACTCCAGCACCTCCACCTCCTCTTCAGGCA...CCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCGGCCTCAATGGCTTTaGCCAAGCTTGCTGCGTAAC +
Preference number: 4 (lower is better)
Translates to: QGRGTGGDGNSSPGQPLRRPQWL*PSLLRN
Trigger: GTTACGCAGCAAGCTTGGCCAAAGCCATTGAGGCCG...CCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGTGGCTTCGGCCTCAATaGCTTTGGCCAAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: QGRGTGGDGNSSPGQPLRWLRPQ*LWPSLL
Trigger: CAGCAAGCTTGGCCAAAGCCATTGAGGCCGAAGCCA...CCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCTCCTTCCCTGTGTGTaGCCAGCTGTACACAGTGAC +
Preference number: 4 (lower is better)
Translates to: QGRGTGGDGNSSPGQPLRLLPCV*PAVHSD
Trigger: GTCACTGTGTACAGCTGGCCACACACAGGGAAGGAG...CCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCTGCAGCAGTCCTTGTCCTGGTaGCTGCATACCAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: RGTGGDGNSSPGQPLRLQQSLSW*LHTRCC
Trigger: GCAGCATCTGGTATGCAGCCACCAGGACAAGGACTG...CTGCAGCCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGGGGTCAGTGGGGGAGTaGGGGGCTGTCTCAGGATTC +
Preference number: 4 (lower is better)
Translates to: GQLYTVTCSQGRGTGGDGGSVGE*GAVSGF
Trigger: GAATCCTGAGACAGCCCCCCACTCCCCCACTGACCC...CCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTTTAGTGGGGGCACTTaGGGTTTCGACCTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: APKAAAQAVMGTPPRASLFSGGT*GFDLLH
Trigger: GTGCAGAAGGTCGAAACCCCAAGTGCCCCCACTAAA...GAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCGCACCTTGCGTGCCTTaGCCCTGGCCACGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: LYTVTCSQGRGTGGDGNSAPCVP*PWPRGR
Trigger: TCTTCCGCGTGGCCAGGGTCAAGGCACGCAAGGTGC...GGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGCCTCAGAGGCGATaGCAACCATGTAGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: CGQLYTVTCSQGRGTGGDGPQRR*QPCRGP
Trigger: GGGGCCCCTACATGGTTGTCATCGCCTCTGAGGCCC...ATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATAGTCCTGGGAGCAGCTaGAGCCAGTGTCCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: CGQLYTVTCSQGRGTGGDSPGSS*SQCPPC
Trigger: GCACGGGGGACACTGGCTTCAGCTGCTCCCAGGACT...ATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCTGCAGCATCATATCTGTCCCTaGGTCCTGGGAGCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: RGTGGDGNSSPGQPLRLQHHICP*VLGAAE
Trigger: TTCAGCTGCTCCCAGGACTCAGGGACAGATATGATG...CTGCAGCCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGCCAGCTGTACACAGTaGCATGCTCCCAAGGCCGCG +
Preference number: 4 (lower is better)
Translates to: PVCGQLYTVTCSQGRGTGASCTQ*HAPKAA
Trigger: CGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGC...GCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGGTGAAGAGGAGGAAATaGTGCATGTGGGGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: QGRGTGGDGNSSPGQPLRVKRRK*CMWGSP
Trigger: AGGAGACCCCCACATGCATCATTTCCTCCTCTTCAC...CCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TGCTCCTTCCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCAGCAGGTGGCGCCACTaGGGACCGCTCCGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: CSFPVCGQLYTVTCSQGRSRWRH*GPLRSA
Trigger: AGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCT...GCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGGAAGGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGCTGTGCTTCCCCTTCTaGGATGGTGACCCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: GQLYTVTCSQGRGTGGDGLCFPF*DGDPAP
Trigger: AGGGGCAGGGTCACCATCTCAGAAGGGGAAGCACAG...CCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCTGGGTGCTGGAAGCAGAGTGTCTaGCCTGCACAGGTGAACCTG +
Preference number: 4 (lower is better)
Translates to: HQQVAPLRTAPKRSAPGCWKQSV*PAQVNL
Trigger: CAGGTTCACCTGTGCAGGTCAGACACTCTGCTTCCA...GCACCCAGGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCTGGGTGCTGTCTGCCAGGCCTGTaGTTCTCCCTAGGACTGTCT +
Preference number: 4 (lower is better)
Translates to: HQQVAPLRTAPKRSAPGCCLPGL*FSLGLS
Trigger: AGACAGTCCTAGGGAGAATCACAGGCCTGGCAGACA...GCACCCAGGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCTGCAGCAAAGATCCATTCCCTaGGGATGGAGCTCGTCACCA +
Preference number: 4 (lower is better)
Translates to: RGTGGDGNSSPGQPLRLQQRSIP*GWSSSP
Trigger: TGGTGACGAGCTCCATCCGCAGGGAATGGATCTTTG...CTGCAGCCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367838.5
ENST00000537209.5
CDS-3UTR GCA 90 bp CCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGACAGTGCACCTTGCGTaGCTTGACCCTGGCCACGCG +
Preference number: 4 (lower is better)
Translates to: PCVWPAVHSDMLPRPRHRTVHLA*LDPGHA
Trigger: CGCGTGGCCAGGGTCAAGGCACGCAAGGTGCACTGT...CCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCTGGGTGCGAAAGGCATTCCTCCTaGTGCCTGAAGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: HQQVAPLRTAPKRSAPGCERHSS*CLKRRW
Trigger: CCACCTCCTCTTCAGGCAGCAGGAGGAATGCCTTTC...GCACCCAGGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCCCCGGGACAGTCCGTaGTGTAACCAAGACCCCTGG +
Preference number: 4 (lower is better)
Translates to: PCVWPAVHSDMLPRPRHRPRDSP*CNQDPW
Trigger: CCAGGGGTCTTGGTTACAGCACGGACTGTCCCGGGG...CCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCCATCTCCTTCTTCGATaGTCTGCAACTGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: APKAAAQAVMGTPPRASLHLLLR*SATAAS
Trigger: AGAGGCTGCAGTTGCAGAGCATCGAAGAAGGAGATG...GAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAGGCATCTGGCACAGTaGACGGCTGGACTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GQLYTVTCSQGRGTGGDGRHLAQ*TAGLPA
Trigger: TGCTGGGAGTCCAGCCGTGCACTGTGCCAGATGCCT...CCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TCCCTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCCAGGGTGGGCCAGTCTaGAAGAGGCCTGTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: SLLAPAGGATEDRSEALCQGGPV*KRPVAV
Trigger: GACAGCCACAGGCCTCTTGCAGACTGGCCCACCCTG...GCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCTTGGGAGTGTGCCATaGAGAACTGAGGCCAGCTAT +
Preference number: 4 (lower is better)
Translates to: QGRGTGGDGNSSPGQPLRLGSVP*RTEASY
Trigger: ATAGCTGGCCTCAGTTCTGCATGGCACACTCCCAAG...CCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGCCAGCCCCGGGGAGTaGGGAGTGGACGTAAACAGG +
Preference number: 4 (lower is better)
Translates to: CGQLYTVTCSQGRGTGGDASPGE*GVDVNR
Trigger: CCTGTTTACGTCCACTCCCCACTCCCCGGGGCTGGC...ATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000537209.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATCAGTGCACCTCGGCGTaGGGTGGGCAGAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: CGQLYTVTCSQGRGTGGDQCTSA*GGQSML
Trigger: CAGCATGCTCTGCCCACCCCACGCCGAGGTGCACTG...ATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367838.5
ENST00000537209.5
CDS-3UTR CCA 90 bp AGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCAGTGCACCTCGGCGTaGGGTGGGCAGAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: RVPHCPHQPCRGTRTVACQCTSA*GGQSML
Trigger: CAGCATGCTCTGCCCACCCCACGCCGAGGTGCACTG...ACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
CDS-3UTR CCA 90 bp CTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCCAGTGCACCTCGGCGTaGGGTGGGCAGAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: LYTVTCSQGRGTGGDGNSQCTSA*GGQSML
Trigger: CAGCATGCTCTGCCCACCCCACGCCGAGGTGCACTG...GGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367838.5
ENST00000537209.5
CDS-3UTR CCA 90 bp GGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAGGAGGTGGAGGTGCTaGAGTTCTTCCTCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: GQLYTVTCSQGRGTGGDGRRWRC*SSSSRS
Trigger: GGACCGGGAGGAAGAACTCCAGCACCTCCACCTCCT...CCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGCAAGCCCTTCGTCTCTaGTCCTCCCATGCCCCACCT +
Preference number: 4 (lower is better)
Translates to: GQLYTVTCSQGRGTGGDGQALRL*SSHAPP
Trigger: AGGTGGGGCATGGGAGGACCAGAGACGAAGGGCTTG...CCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGGCCCCTCATGCATCTTaGTGGCTGGCATTCTATCCA +
Preference number: 4 (lower is better)
Translates to: QGRGTGGDGNSSPGQPLRAPHAS*WLAFYP
Trigger: TGGATAGAATGCCAGCCACCAAGATGCATGAGGGGC...CCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCTGCAGGTGAAGAAACACCAGTaGCTCAGCTTCAGCTGCACC +
Preference number: 4 (lower is better)
Translates to: RGTGGDGNSSPGQPLRLQVKKHQ*LSFSCT
Trigger: GGTGCAGCTGAAGCTGAGCCACTGGTGTTTCTTCAC...CTGCAGCCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCCTCCAGTCCCGCCGTaGACGATCCTGGTATCGCCT +
Preference number: 4 (lower is better)
Translates to: PCVWPAVHSDMLPRPRHRPPVPP*TILVSP
Trigger: AGGCGATACCAGGATCGTCCACGGCGGGACTGGAGG...CCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367835.1
ENST00000537209.5
CDS-3UTR TCA 90 bp CCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGAGCGGTCGATGGCAATaGCCCCGAGGGTTAGCATGC +
Preference number: 4 (lower is better)
Translates to: PCVWPAVHSDMLPRPRHRSGRWQ*PRGLAC
Trigger: GCATGCTAACCCTCGGGGTCATTGCCATCGACCGCT...CCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367838.5
ENST00000537209.5
CDS-3UTR TCA 90 bp GGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGCAGCCCGGTTCCCTGTaGTCTTCATGGGGTACACCA +
Preference number: 4 (lower is better)
Translates to: GQLYTVTCSQGRGTGGDGQPGSL*SSWGTP
Trigger: TGGTGTACCCCATGAAGATCACAGGGAACCGGGCTG...CCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCCACACACATCCATTTaGACTCGTCAAACTCCACGG +
Preference number: 4 (lower is better)
Translates to: QGRGTGGDGNSSPGQPLRPHTSI*TRQTPR
Trigger: CCGTGGAGTTTGACGAGTTCAAATGGATGTGTGTGG...CCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCTGCAGCCACACACATCCATTTaGACTCGTCAAACTCCACGG +
Preference number: 4 (lower is better)
Translates to: RGTGGDGNSSPGQPLRLQPHTSI*TRQTPR
Trigger: CCGTGGAGTTTGACGAGTTCAAATGGATGTGTGTGG...CTGCAGCCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGCCAGCTGTACACAGTaGCATGCTCCCAAGGCCGCG +
Preference number: 4 (lower is better)
Translates to: CGQLYTVTCSQGRGTGGDASCTQ*HAPKAA
Trigger: CGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGC...ATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCATACCCACCTCCCTCTaGAGCCACACTTCTTTCTAT +
Preference number: 4 (lower is better)
Translates to: APKAAAQAVMGTPPRASLIPTSL*SHTSFY
Trigger: ATAGAAAGAAGTGTGGCTTCAGAGGGAGGTGGGTAT...GAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACCCACACCCTTTGCCCTaGGCGGGACGTGGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: QLYTVTCSQGRGTGGDGNPHPLP*AGRGVS
Trigger: AGAGACTCCACGTCCCGCTCAGGGCAAAGGGTGTGG...GTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367836.5
ENST00000367838.5
ENST00000539777.5
CDS-3UTR TCA 90 bp GGAGGAAATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCTCCAGCCGAGGGGCGTaGCCGCTTCTCCCCACACCC +
Preference number: 4 (lower is better)
Translates to: GGNDACGGLLPSPSSLVLSSRGA*PLLPTP
Trigger: GGGTGTGGGGAGAAGCGGTCACGCCCCTCGGCTGGA...GAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCATTTCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367838.5
ENST00000539777.5
CDS-3UTR TCA 90 bp CTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCGAGCTCGCAGCCCTCTaGCCACACAGTGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: LLAPAGGATEDRSEALCSELAAL*PHSAPS
Trigger: TGAAGGAGCACTGTGTGGTCAGAGGGCTGCGAGCTC...GGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537209.5
CDS-3UTR GCA 90 bp TGCTCCTTCCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGAGGCTCATGGTCAGTaGACCTCGGCGTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: CSFPVCGQLYTVTCSQGREAHGQ*TSAWGG
Trigger: CCCACCCCACGCCGAGGTGCACTGACCATGAGCCTC...GCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGGAAGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367838.5
ENST00000537209.5
CDS-3UTR GCA 90 bp CTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCACAGTGCACCTTGCGTaGCTTGACCCTGGCCACGCG +
Preference number: 4 (lower is better)
Translates to: LYTVTCSQGRGTGGDGNSTVHLA*LDPGHA
Trigger: CGCGTGGCCAGGGTCAAGGCACGCAAGGTGCACTGT...GGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACCAGGGGCTGTCCACCTaGCATGAGCGCAGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: QLYTVTCSQGRGTGGDGNQGLST*HERSEV
Trigger: CACCTCACTGCGCTCATGGCAGGTGGACAGCCCCTG...GTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCCAGGGGCTGTCCACCTaGCATGAGCGCAGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: LYTVTCSQGRGTGGDGNSQGLST*HERSEV
Trigger: CACCTCACTGCGCTCATGGCAGGTGGACAGCCCCTG...GGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TCCCTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCGTAGCATCCCTGCCCTaGCTCTTAGGGGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: SLLAPAGGATEDRSEALCVASLP*LLGAWR
Trigger: CCTCCAAGCCCCTAAGAGGCAGGGCAGGGATGCTAC...GCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACCGGCTGGGAGAAGGCTaGTCACCTGGTCCTCACGGA +
Preference number: 4 (lower is better)
Translates to: QLYTVTCSQGRGTGGDGNRLGEG*SPGPHG
Trigger: TCCGTGAGGACCAGGTGAGCAGCCTTCTCCCAGCCG...GTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367836.5
CDS-3UTR CCA 90 bp GGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGCAAAGGACAGCCATGTaGCCCAAGTCTCCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: GQLYTVTCSQGRGTGGDGQRTAM*PKSPGS
Trigger: CGAGCCTGGAGACTTGGGCCACATGGCTGTCCTTTG...CCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCCTGTCGTTGCACAAATaGTTCCCGATAATACCGGTC +
Preference number: 4 (lower is better)
Translates to: APKAAAQAVMGTPPRASLLSLHK*FPIIPV
Trigger: GACCGGTATTATCGGGAACCATTTGTGCAACGACAG...GAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGGCTCCTTCTCTTGGGTaGGCAAGTGCAGTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: GQLYTVTCSQGRGTGGDGAPSLG*ASAVRG
Trigger: CCCTCTCACTGCACTTGCCCACCCAAGAGAAGGAGC...CCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCTGCAGTTTCAGTCCTTGTCCTaGTGGCTGCATACCAGATGC +
Preference number: 4 (lower is better)
Translates to: RGTGGDGNSSPGQPLRLQFQSLS*WLHTRC
Trigger: GCATCTGGTATGCAGCCACCAGGACAAGGACTGAAA...CTGCAGCCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTGCTTTAGATGCTTCTaGTCCCATCACTGGGACCTA +
Preference number: 4 (lower is better)
Translates to: APKAAAQAVMGTPPRASLCFRCF*SHHWDL
Trigger: TAGGTCCCAGTGATGGGACCAGAAGCATCTAAAGCA...GAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271357.9
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCTGCAGTTTCCTGGCTGTGCTTaGCACTACAGTCCCATTCAG +
Preference number: 4 (lower is better)
Translates to: RGTGGDGNSSPGQPLRLQFPGCA*HYSPIQ
Trigger: CTGAATGGGACTGTAGTGCCAAGCACAGCCAGGAAA...CTGCAGCCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TCCCTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCATAGCCCAGCTAGTGTaGGGTCAGTGGGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: SLLAPAGGATEDRSEALCIAQLV*GQWGSG
Trigger: CCCACTCCCCCACTGACCCCACACTAGCTGGGCTAT...GCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCAGCAGGCTAGCCAGGTaGTCCTTGGTCACCAAGGCC +
Preference number: 4 (lower is better)
Translates to: PVCGQLYTVTCSQGRGTGSRLAR*SLVTKA
Trigger: GGCCTTGGTGACCAAGGACCACCTGGCTAGCCTGCT...GCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCCCACAGGCTCCATCTaGGGTTCTGCATATATTGTG +
Preference number: 4 (lower is better)
Translates to: QGRGTGGDGNSSPGQPLRPTGSI*GSAYIV
Trigger: CACAATATATGCAGAACCCCAGATGGAGCCTGTGGG...CCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGCCCAGTTCCAGCCGCTaGGACGTCGCCTTTTCCATG +
Preference number: 4 (lower is better)
Translates to: CVWPAVHSDMLPRPRHRRPSSSR*DVAFSM
Trigger: CATGGAAAAGGCGACGTCCCAGCGGCTGGAACTGGG...CCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367835.1
ENST00000537209.5
CDS-3UTR CCA 90 bp TGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGAAGGCGCCGAGGGCTaGTCGAGTTCTCCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: CGQLYTVTCSQGRGTGGDEGAEG*SSSPLS
Trigger: GGAAAGGGGAGAACTCGACCAGCCCTCGGCGCCTTC...ATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367836.5
CDS-3UTR TCA 90 bp GGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGCACCCTCCTCCTCAGTaGGATTACTCAGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: GQLYTVTCSQGRGTGGDGHPPPQ*DYSAPS
Trigger: GGAAGGAGCTGAGTAATCTCACTGAGGAGGAGGGTG...CCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367838.5
ENST00000537209.5
CDS-3UTR TCA 90 bp CTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCCATCCTCCTCCACGATaGCGACTGTGCCACAGTGCA +
Preference number: 4 (lower is better)
Translates to: LLAPAGGATEDRSEALCSHPPPR*RLCHSA
Trigger: TGCACTGTGGCACAGTCGTCATCGTGGAGGAGGATG...GGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TCCCTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCCATCCTCCTCCACGATaGCGACTGTGCCACAGTGCA +
Preference number: 4 (lower is better)
Translates to: SLLAPAGGATEDRSEALCHPPPR*RLCHSA
Trigger: TGCACTGTGGCACAGTCGTCATCGTGGAGGAGGATG...GCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCCATCCTCCTCCACGATaGCGACTGTGCCACAGTGCA +
Preference number: 4 (lower is better)
Translates to: PVCGQLYTVTCSQGRGTGHPPPR*RLCHSA
Trigger: TGCACTGTGGCACAGTCGTCATCGTGGAGGAGGATG...GCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGGGCAAGTGCAGTaGGAGGGAGGGTTGTCATCA +
Preference number: 4 (lower is better)
Translates to: PVCGQLYTVTCSQGRGTGGGQVQ*EGGLSS
Trigger: TGATGACAACCCTCCCTCTCACTGCACTTGCCCACC...GCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCGGTGGGCAAGTGCAGTaGGAGGGAGGGTTGTCATCA +
Preference number: 4 (lower is better)
Translates to: LLAPAGGATEDRSEALCSGGQVQ*EGGLSS
Trigger: TGATGACAACCCTCCCTCTCACTGCACTTGCCCACC...GGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GAACCCAAGAGCCACAGCCAGGCAGTCACTCTGTCACTACAGGACAGAGCTGTCAGCCCCACGGCACCCTaGGGCCCTCATCTCTGCTCG +
Preference number: 4 (lower is better)
Translates to: EPKSHSQAVTLSLQDRAVSPTAP*GPHLCS
Trigger: CGAGCAGAGATGAGGGCCTCAGGGTGCCGTGGGGCT...GACAGCTCTGTCCTGTAGTGACAGAGTGACTGCCTGGCTGTGGCTCTTGGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GAACCCAAGAGCCACAGCCAGGCAGTCACTCTGTCACTACAGGACAGAGCTGTCAGCAGGTGGCGCCACTaGGGACCGCTCCGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: EPKSHSQAVTLSLQDRAVSRWRH*GPLRSA
Trigger: AGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCT...GACAGCTCTGTCCTGTAGTGACAGAGTGACTGCCTGGCTGTGGCTCTTGGGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGCGCCTGGCATCCAGGTaGCCCAGAATAGTTGAGTTC +
Preference number: 4 (lower is better)
Translates to: GQLYTVTCSQGRGTGGDGRLASR*PRIVEF
Trigger: GAACTCAACTATTCTGGGTCACCTGGATGCCAGGCG...CCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCTGCAGTCCAGCGGTCTATTATaGGAACACAACACAGTCCTC +
Preference number: 4 (lower is better)
Translates to: RGTGGDGNSSPGQPLRLQSSGLL*EHNTVL
Trigger: GAGGACTGTGTTGTGTTCTCATAATAGACCGCTGGA...CTGCAGCCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGAGTAGCTCCTCTTGCTaGCATTTAGGTCAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: QGRGTGGDGNSSPGQPLRSSSSC*HLGQFQ
Trigger: CTGGAACTGACCTAAATGTCAGCAAGAGGAGCTACT...CCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367836.5
CDS-3UTR GCA 90 bp CCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGAACAGGTCTTCACACTaGTGCCCTGCACTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: PCVWPAVHSDMLPRPRHRNRSSH*CPALPR
Trigger: CCGAGGGAGTGCAGGGCAGCAGTGTGAAGACCTGTT...CCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000537209.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATCATCCATCTGCCTTCTaGCAGGCTCTGTCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: CGQLYTVTCSQGRGTGGDHPSAF*QALSRA
Trigger: AGCCCGGGACAGAGCCTGGCAGAAGGCAGATGGATG...ATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000537209.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGCACGAGCATCCATCTaGCTTCTGCCAGGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: PVCGQLYTVTCSQGRGTGARASI*LLPGSV
Trigger: GACAGAGCCTGGCAGAAGGCAGATGGATGCTCGTGC...GCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000537209.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGCCAGATGTAGACAAGTaGCATCACAGCCCGGTTCCC +
Preference number: 4 (lower is better)
Translates to: GQLYTVTCSQGRGTGGDGPDVDK*HHSPVP
Trigger: GGGAACCGGGCTGTGATGGCACTTGTCTACATCTGG...CCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGACGACTGTGCCACAGTaGACCTTGCGTGCCTTGACC +
Preference number: 4 (lower is better)
Translates to: CVWPAVHSDMLPRPRHRRTTVPQ*TLRALT
Trigger: GGTCAAGGCACGCAAGGTGCACTGTGGCACAGTCGT...CCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TCCCTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCAGGCATTCCTCCTGCTaGCTGAAGAGGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SLLAPAGGATEDRSEALCRHSSC*LKRRWR
Trigger: CCTCCACCTCCTCTTCAGGCAGCAGGAGGAATGCCT...GCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TGCTCCTTCCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCCAGGGGCTGTCCACCTaGCATGAGCGCAGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: CSFPVCGQLYTVTCSQGRQGLST*HERSEV
Trigger: CACCTCACTGCGCTCATGGCAGGTGGACAGCCCCTG...GCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGGAAGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGTTTGGCCAAGCTTGCTaGGTAACTGTCCAAGGACTT +
Preference number: 4 (lower is better)
Translates to: QGRGTGGDGNSSPGQPLRFGQAC*VTVQGL
Trigger: AAGTCCTTGGACAGTTACGCAGCAAGCTTGGCCAAA...CCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AGAGCTGGGCCAATAACCCAGGTTGCTGGCTGTGGGTCCAGGGCTGCTTCTATCGGCTCACAAGAGTTCTaGTGCCTCGGCGGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: RAGPITQVAGCGSRAASIGSQEF*CLGGPR
Trigger: TCGGGGGCCGCCGAGGCAGCAGAACTCTTGTGAGCC...GATAGAAGCAGCCCTGGACCCACAGCCAGCAACCTGGGTTATTGGCCCAGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGTTCATCCTTGGCTCTaGACAGCCACACCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: PVCGQLYTVTCSQGRGTGVHPWL*TATPLP
Trigger: TGGCAGCGGTGTGGCTGTGCAGAGCCAAGGATGAAC...GCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGGTTCATCCTTGGCTCTaGACAGCCACACCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: CVWPAVHSDMLPRPRHRRVHPWL*TATPLP
Trigger: TGGCAGCGGTGTGGCTGTGCAGAGCCAAGGATGAAC...CCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTGTAGCATCCCTGCCCTaGCTCTTAGGGGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: RVPHCPHQPCRGTRTVACVASLP*LLGAWR
Trigger: CCTCCAAGCCCCTAAGAGGCAGGGCAGGGATGCTAC...ACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTGGTATCGCCTTTGCTaGTCACCTTTCATTCATCCA +
Preference number: 4 (lower is better)
Translates to: APKAAAQAVMGTPPRASLWYRLC*SPFIHP
Trigger: TGGATGAATGAAAGGTGAGCAGCAAAGGCGATACCA...GAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367835.1
ENST00000537209.5
CDS-3UTR GCA 90 bp CAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACGGGGTGGGCAGAGCATaGTGGACGACTGTAATCCCG +
Preference number: 4 (lower is better)
Translates to: QLYTVTCSQGRGTGGDGNGVGRA*WTTVIP
Trigger: CGGGATTACAGTCGTCCAGCATGCTCTGCCCACCCC...GTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367835.1
ENST00000367838.5
CDS-3UTR GCA 90 bp TGCTCCTTCCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCTCTCCCCACACCCTTTaGCCTGAGCGGGACGTGGAG +
Preference number: 4 (lower is better)
Translates to: CSFPVCGQLYTVTCSQGRSPHTL*PERDVE
Trigger: CTCCACGTCCCGCTCAGGGCAAAGGGTGTGGGGAGA...GCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGGAAGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367836.5
ENST00000367838.5
ENST00000539777.5
CDS-3UTR CCA 90 bp AGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTAGGAGGTGGAGGTGCTaGAGTTCTTCCTCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: RVPHCPHQPCRGTRTVACRRWRC*SSSSRS
Trigger: GGACCGGGAGGAAGAACTCCAGCACCTCCACCTCCT...ACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGTGCCTGAAGAGGAGGTaGAGGTGCTGGAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: GQLYTVTCSQGRGTGGDGCLKRR*RCWSSS
Trigger: GGAAGAACTCCAGCACCTCCACCTCCTCTTCAGGCA...CCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGGGGCTTTGCACTGGTTaGCCGAGTAGACCACACCCT +
Preference number: 4 (lower is better)
Translates to: CVWPAVHSDMLPRPRHRRGLCTG*PSRPHP
Trigger: AGGGTGTGGTCTACTCGGCCAACCAGTGCAAAGCCC...CCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCCAAAGGACAGCCATGTaGCCCAAGTCTCCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: LLAPAGGATEDRSEALCSQRTAM*PKSPGS
Trigger: CGAGCCTGGAGACTTGGGCCACATGGCTGTCCTTTG...GGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGCTCCTTCTCTTGGGTaGGCAAGTGCAGTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: PVCGQLYTVTCSQGRGTGAPSLG*ASAVRG
Trigger: CCCTCTCACTGCACTTGCCCACCCAAGAGAAGGAGC...GCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCCAAGCCCTTCGTCTCTaGTCCTCCCATGCCCCACCT +
Preference number: 4 (lower is better)
Translates to: LYTVTCSQGRGTGGDGNSQALRL*SSHAPP
Trigger: AGGTGGGGCATGGGAGGACCAGAGACGAAGGGCTTG...GGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGAATAACCCAGGTTGCTaGCTGTGGGTCCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: CVWPAVHSDMLPRPRHRRNNPGC*LWVQGC
Trigger: GCAGCCCTGGACCCACAGCCAGCAACCTGGGTTATT...CCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCCTCATGCATCTTGGTaGCTGGCATTCTATCCAGAT +
Preference number: 4 (lower is better)
Translates to: QGRGTGGDGNSSPGQPLRPHASW*LAFYPD
Trigger: ATCTGGATAGAATGCCAGCCACCAAGATGCATGAGG...CCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGACTCCCAATGCCTTCTaGGTCAAAACAACCCCAAAC +
Preference number: 4 (lower is better)
Translates to: QGRGTGGDGNSSPGQPLRTPNAF*VKTTPN
Trigger: GTTTGGGGTTGTTTTGACCCAGAAGGCATTGGGAGT...CCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCTTTTCTCATCCCCTTaGCCAAGACTTGGAGTTTGG +
Preference number: 4 (lower is better)
Translates to: QGRGTGGDGNSSPGQPLRLFSSP*PRLGVW
Trigger: CCAAACTCCAAGTCTTGGCCAAGGGGATGAGAAAAG...CCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATCAGCCCGGTTCCCTGTaGTCTTCATGGGGTACACCA +
Preference number: 4 (lower is better)
Translates to: CGQLYTVTCSQGRGTGGDQPGSL*SSWGTP
Trigger: TGGTGTACCCCATGAAGATCACAGGGAACCGGGCTG...ATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCCATAGCACACCAGCATaGCCAGAAAGGGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: PVCGQLYTVTCSQGRGTGHSTPA*PERGRG
Trigger: CCCTCTTCCCCTTTCTGGTCATGCTGGTGTGCTATG...GCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTGGCCACGCGGAAGATaGAGCCATAGCACACCAGCA +
Preference number: 4 (lower is better)
Translates to: QLYTVTCSQGRGTGGDGNWPRGR*SHSTPA
Trigger: TGCTGGTGTGCTATGGCTTCATCTTCCGCGTGGCCA...GTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTGGCCACGCGGAAGATaGAGCCATAGCACACCAGCA +
Preference number: 4 (lower is better)
Translates to: LYTVTCSQGRGTGGDGNSWPRGR*SHSTPA
Trigger: TGCTGGTGTGCTATGGCTTCATCTTCCGCGTGGCCA...GGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATTGGCCACGCGGAAGATaGAGCCATAGCACACCAGCA +
Preference number: 4 (lower is better)
Translates to: CGQLYTVTCSQGRGTGGDWPRGR*SHSTPA
Trigger: TGCTGGTGTGCTATGGCTTCATCTTCCGCGTGGCCA...ATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGGCACCTTGCGTGCCTTaGCCCTGGCCACGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: ARINHVEAPGRSRVIRKKAPCVP*PWPRGR
Trigger: TCTTCCGCGTGGCCAGGGTCAAGGCACGCAAGGTGC...CTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TGCTCCTTCCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCTTCCTCCCGGTCCTCTaGGCATCCTCCTCCACGATG +
Preference number: 4 (lower is better)
Translates to: CSFPVCGQLYTVTCSQGRFLPVL*ASSSTM
Trigger: CATCGTGGAGGAGGATGCTCAGAGGACCGGGAGGAA...GCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGGAAGGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCATTCCTCCTGCTGCCTaGAGAGGAGGTGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: LYTVTCSQGRGTGGDGNSIPPAA*RGGGGA
Trigger: AGCACCTCCACCTCCTCTTCAGGCAGCAGGAGGAAT...GGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGCATCTGGCACAGGGGCCTCAGAGGCGATaGCAACCATGTAGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: VILHSTLGRVLLLRHLAQGPQRR*QPCRGP
Trigger: GGGGCCCCTACATGGTTGTCATCGCCTCTGAGGCCC...CTGTGCCAGATGCCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AGTCACCCTGTGACGGAGGACTCCCTCAATCCTGTGTGTCTCCACATTGAAACACCGCGGCACAGGCGGTaGTGGGAACTCCTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: SHPVTEDSLNPVCLHIETPRHRR*WELLPG
Trigger: CCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGG...TGTTTCAATGTGGAGACACACAGGATTGAGGGAGTCCTCCGTCACAGGGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGGTGACCCAGAATAGTTaGGTTCAATCACCACAGGTA +
Preference number: 4 (lower is better)
Translates to: QGRGTGGDGNSSPGQPLRVTQNS*VQSPQV
Trigger: TACCTGTGGTGATTGAACTCAACTATTCTGGGTCAC...CCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCAACTCCTGACCTCAGGTaGTCTGCCCATCTCGACCCC +
Preference number: 4 (lower is better)
Translates to: WVLSLRTSPRTEGPTLPATPDLR*SAHLDP
Trigger: GGGGTCGAGATGGGCAGATCACCTGAGGTCAGGAGT...TGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCTGGGTGCTCCAGCGGTCTATTATaGGAACACAACACAGTCCTC +
Preference number: 4 (lower is better)
Translates to: HQQVAPLRTAPKRSAPGCSSGLL*EHNTVL
Trigger: GAGGACTGTGTTGTGTTCTCATAATAGACCGCTGGA...GCACCCAGGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp ATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCTGTTCCCGGCCCGCGCCCTaGGCCCTCAGCCTCGCACAA +
Preference number: 4 (lower is better)
Translates to: INHVEAPGRSRVIRKKCCSRPAP*ALSLAQ
Trigger: TTGTGCGAGGCTGAGGGCTCAGGGCGCGGGCCGGGA...ACAGCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539777.5
CDS-3UTR GCA 90 bp GTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGCATCTGGCACAGGAGGCTCATGGTCAGTaGACCTCGGCGTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: VILHSTLGRVLLLRHLAQEAHGQ*TSAWGG
Trigger: CCCACCCCACGCCGAGGTGCACTGACCATGAGCCTC...CTGTGCCAGATGCCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
CDS-3UTR GCA 90 bp CTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCACGACTGTGCCACAGTaGACCTTGCGTGCCTTGACC +
Preference number: 4 (lower is better)
Translates to: LYTVTCSQGRGTGGDGNSTTVPQ*TLRALT
Trigger: GGTCAAGGCACGCAAGGTGCACTGTGGCACAGTCGT...GGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTACGACTGTGCCACAGTaGACCTTGCGTGCCTTGACC +
Preference number: 4 (lower is better)
Translates to: RVPHCPHQPCRGTRTVACTTVPQ*TLRALT
Trigger: GGTCAAGGCACGCAAGGTGCACTGTGGCACAGTCGT...ACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACAGGCATTCCTCCTGCTaGCTGAAGAGGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: QLYTVTCSQGRGTGGDGNRHSSC*LKRRWR
Trigger: CCTCCACCTCCTCTTCAGGCAGCAGGAGGAATGCCT...GTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGGAAAGGCATTCCTCCTaGTGCCTGAAGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: CVWPAVHSDMLPRPRHRRERHSS*CLKRRW
Trigger: CCACCTCCTCTTCAGGCAGCAGGAGGAATGCCTTTC...CCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGAAAGGCATTCCTCCTaGTGCCTGAAGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PVCGQLYTVTCSQGRGTGERHSS*CLKRRW
Trigger: CCACCTCCTCTTCAGGCAGCAGGAGGAATGCCTTTC...GCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGGAAAGGCATTCCTCCTaGTGCCTGAAGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PCVWPAVHSDMLPRPRHRERHSS*CLKRRW
Trigger: CCACCTCCTCTTCAGGCAGCAGGAGGAATGCCTTTC...CCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCCAGGGGCTGTCCACCTaGCATGAGCGCAGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: GPVLELRVPHCPHQPCRGQGLST*HERSEV
Trigger: CACCTCACTGCGCTCATGGCAGGTGGACAGCCCCTG...GCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GAACCCAAGAGCCACAGCCAGGCAGTCACTCTGTCACTACAGGACAGAGCTGTCGGCTCACAAGAGTTCTaGTGCCTCGGCGGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: EPKSHSQAVTLSLQDRAVGSQEF*CLGGPR
Trigger: TCGGGGGCCGCCGAGGCAGCAGAACTCTTGTGAGCC...GACAGCTCTGTCCTGTAGTGACAGAGTGACTGCCTGGCTGTGGCTCTTGGGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GGAGGAAATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCGGCTCACAAGAGTTCTaGTGCCTCGGCGGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: GGNDACGGLLPSPSSLVLGSQEF*CLGGPR
Trigger: TCGGGGGCCGCCGAGGCAGCAGAACTCTTGTGAGCC...GAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCATTTCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGCCTTGTCCTGGTGGCTaGATACCAGATGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: CVWPAVHSDMLPRPRHRRPCPGG*IPDAAP
Trigger: AGGAGCAGCATCTGGTATGCAGCCACCAGGACAAGG...CCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCGTCATTAGGAAGAAGTaGTGTGTCATCCTTCACAGT +
Preference number: 4 (lower is better)
Translates to: APKAAAQAVMGTPPRASLVIRKK*CVILHS
Trigger: ACTGTGAAGGATGACACAGCACTTCTTCCTAATGAC...GAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCCTGAGGGTCCCACACTaGCCGCATCAACCATGTAGA +
Preference number: 4 (lower is better)
Translates to: LLAPAGGATEDRSEALCSLRVPH*PHQPCR
Trigger: TCTACATGGTTGATGCGGGCAGTGTGGGACCCTCAG...GGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCACGCTCTGCTCCTGGGTaGTTTCTCTGCGGACCAGTC +
Preference number: 4 (lower is better)
Translates to: WVLSLRTSPRTEGPTLPARSAPG*FLCGPV
Trigger: GACTGGTCCGCAGAGAAAGCACCCAGGAGCAGAGCG...TGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TGCTCCTTCCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGCCAATAACCCAGGTTaGTGGCTGTGGGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: CSFPVCGQLYTVTCSQGRANNPG*WLWVQG
Trigger: GCCCTGGACCCACAGCCAGCAACCTGGGTTATTGGC...GCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGGAAGGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCTGCAGTGTCCAAATGACATGTaGACACAAAGACAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RGTGGDGNSSPGQPLRLQCPNDM*TQRQSW
Trigger: CCAGCTCTGTCTTTGTGTGCACATGTCATTTGGACA...CTGCAGCCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGGCCAAATGTCCCATGTaGCACTGTCCATGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: PCVWPAVHSDMLPRPRHRAKCPM*HCPCGP
Trigger: GGGACCACATGGACAGTGGCACATGGGACATTTGGC...CCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCGTTCATCCTTGGCTCTaGACAGCCACACCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: LYTVTCSQGRGTGGDGNSVHPWL*TATPLP
Trigger: TGGCAGCGGTGTGGCTGTGCAGAGCCAAGGATGAAC...GGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCTGGGTGCTACACTCCTCAACTCTaGTTCTCCAGGAGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: HQQVAPLRTAPKRSAPGCYTPQL*FSRSSD
Trigger: ATCACTGCTCCTGGAGAAGCAGAGTTGAGGAGTGTA...GCACCCAGGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGCTGCTCTCTATTGCCTaGTCTTCCTCACCACATCCC +
Preference number: 4 (lower is better)
Translates to: GQLYTVTCSQGRGTGGDGLLSIA*SSSPHP
Trigger: GGGATGTGGTGAGGAAGAGCAGGCAATAGAGAGCAG...CCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCTGCAGCGTTCTCATCCCATATaGCTTTGTCCAAAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: RGTGGDGNSSPGQPLRLQRSHPI*LCPKVA
Trigger: TGCAACCTTTGGACAAAGGCATATGGGATGAGAACG...CTGCAGCCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367836.5
CDS-3UTR GCA 90 bp AGAGCTGGGCCAATAACCCAGGTTGCTGGCTGTGGGTCCAGGGCTGCTTCTATCAGAAACGGGGCGGGCTaGACCCAGCAGAATGGGGTG +
Preference number: 4 (lower is better)
Translates to: RAGPITQVAGCGSRAASIRNGAG*TQQNGV
Trigger: CACCCCATTCTGCTGGGTGCAGCCCGCCCCGTTTCT...GATAGAAGCAGCCCTGGACCCACAGCCAGCAACCTGGGTTATTGGCCCAGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539777.5
CDS-3UTR CCA 90 bp CCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCTGCCTGAAGAGGAGGTaGAGGTGCTGGAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PVCGQLYTVTCSQGRGTGCLKRR*RCWSSS
Trigger: GGAAGAACTCCAGCACCTCCACCTCCTCTTCAGGCA...GCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACCAAAGGACAGCCATGTaGCCCAAGTCTCCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: QLYTVTCSQGRGTGGDGNQRTAM*PKSPGS
Trigger: CGAGCCTGGAGACTTGGGCCACATGGCTGTCCTTTG...GTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCCAAAGGACAGCCATGTaGCCCAAGTCTCCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: LYTVTCSQGRGTGGDGNSQRTAM*PKSPGS
Trigger: CGAGCCTGGAGACTTGGGCCACATGGCTGTCCTTTG...GGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCTGGGTGCCTGTCGTTGCACAAATaGTTCCCGATAATACCGGTC +
Preference number: 4 (lower is better)
Translates to: HQQVAPLRTAPKRSAPGCLSLHK*FPIIPV
Trigger: GACCGGTATTATCGGGAACCATTTGTGCAACGACAG...GCACCCAGGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGGCTTCGGCCTCAATaGCTTTGGCCAAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: CVWPAVHSDMLPRPRHRRWLRPQ*LWPSLL
Trigger: CAGCAAGCTTGGCCAAAGCCATTGAGGCCGAAGCCA...CCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGTGTAACCAAGACCCCTaGCAAAGCCTCCTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: GQLYTVTCSQGRGTGGDGCNQDP*QSLLPK
Trigger: TTTGGGGAGGAGGCTTTGCCAGGGGTCTTGGTTACA...CCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CCTGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGAATAACCCAGGTTGCTaGCTGTGGGTCCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PGCFLCGPVLELRVPHCPNNPGC*LWVQGC
Trigger: GCAGCCCTGGACCCACAGCCAGCAACCTGGGTTATT...CGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp ATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCCCATGCCGGGTCAGTGGGGGAGTaGGGGGCTGTCTCAGGATTC +
Preference number: 4 (lower is better)
Translates to: MMHVGVSFQALRLWSSHAGSVGE*GAVSGF
Trigger: GAATCCTGAGACAGCCCCCCACTCCCCCACTGACCC...GGCATGGGAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGCTACAGAGCCTAGCCTaGTGCTTCGCATACACTGGA +
Preference number: 4 (lower is better)
Translates to: GQLYTVTCSQGRGTGGDGLQSLA*CFAYTG
Trigger: TCCAGTGTATGCGAAGCACCAGGCTAGGCTCTGTAG...CCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTGTGCCACTGTCCATGTaGTCCCATCAGGAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RVPHCPHQPCRGTRTVACVPLSM*SHQEGC
Trigger: GCAGCCTTCCTGATGGGACCACATGGACAGTGGCAC...ACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TGCTCCTTCCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCAGCAGGCTAGCCAGGTaGTCCTTGGTCACCAAGGCC +
Preference number: 4 (lower is better)
Translates to: CSFPVCGQLYTVTCSQGRSRLAR*SLVTKA
Trigger: GGCCTTGGTGACCAAGGACCACCTGGCTAGCCTGCT...GCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGGAAGGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATCACCCTCCTCCTCAGTaGGATTACTCAGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: CGQLYTVTCSQGRGTGGDHPPPQ*DYSAPS
Trigger: GGAAGGAGCTGAGTAATCTCACTGAGGAGGAGGGTG...ATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367838.5
ENST00000537209.5
CDS-3UTR TCA 90 bp TGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGTCAAACTCCACGGATaGCCAACCAAACAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: CGQLYTVTCSQGRGTGGDVKLHG*PTKQGW
Trigger: CCACCCCTGTTTGGTTGGTCATCCGTGGAGTTTGAC...ATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CCTGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCATAGCACACCAGCATaGCCAGAAAGGGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: PGCFLCGPVLELRVPHCPHSTPA*PERGRG
Trigger: CCCTCTTCCCCTTTCTGGTCATGCTGGTGTGCTATG...CGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATCATAGCACACCAGCATaGCCAGAAAGGGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: CGQLYTVTCSQGRGTGGDHSTPA*PERGRG
Trigger: CCCTCTTCCCCTTTCTGGTCATGCTGGTGTGCTATG...ATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TGCTCCTTCCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGTGGGCAAGTGCAGTaGGAGGGAGGGTTGTCATCA +
Preference number: 4 (lower is better)
Translates to: CSFPVCGQLYTVTCSQGRGGQVQ*EGGLSS
Trigger: TGATGACAACCCTCCCTCTCACTGCACTTGCCCACC...GCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGGAAGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCAGGTGGGCAAGTGCAGTaGGAGGGAGGGTTGTCATCA +
Preference number: 4 (lower is better)
Translates to: WVLSLRTSPRTEGPTLPAGGQVQ*EGGLSS
Trigger: TGATGACAACCCTCCCTCTCACTGCACTTGCCCACC...TGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCTGCAGACTTCAGCTTTCACATaGAGAATCGAGTTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: RGTGGDGNSSPGQPLRLQTSAFT*RIEFLA
Trigger: TGCCAAGAACTCGATTCTTCATGTGAAAGCTGAAGT...CTGCAGCCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGTGAAGAGGAGGAAATaGTGCATGTGGGGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: PVCGQLYTVTCSQGRGTGVKRRK*CMWGSP
Trigger: AGGAGACCCCCACATGCATCATTTCCTCCTCTTCAC...GCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGAGGCGGAAATCTCAATaGAAGAGGCAGAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: CVWPAVHSDMLPRPRHRRRRKSQ*KRQRWA
Trigger: TGCCCACCTCTGCCTCTTTCATTGAGATTTCCGCCT...CCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACCAGTGGCAATACCTGTaGACCTGGATGGGGTCATGC +
Preference number: 4 (lower is better)
Translates to: QLYTVTCSQGRGTGGDGNQWQYL*TWMGSC
Trigger: GCATGACCCCATCCAGGTTCACAGGTATTGCCACTG...GTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTGCACTGGGGTAAAATaGGATAAAGCATTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: APKAAAQAVMGTPPRASLCTGVK*DKAFGS
Trigger: ACTTCCAAATGCTTTATCTCATTTTACCCCAGTGCA...GAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCACTCCTGACCTCAGGTaGTCTGCCCATCTCGACCCC +
Preference number: 4 (lower is better)
Translates to: GPVLELRVPHCPHQPCRGTPDLR*SAHLDP
Trigger: GGGGTCGAGATGGGCAGATCACCTGAGGTCAGGAGT...GCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCCCAGATGTAGACAAGTaGCATCACAGCCCGGTTCCC +
Preference number: 4 (lower is better)
Translates to: LYTVTCSQGRGTGGDGNSPDVDK*HHSPVP
Trigger: GGGAACCGGGCTGTGATGGCACTTGTCTACATCTGG...GGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TGCTCCTTCCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCAAGAGGAGGTGGAGGTaGTGGAGTTCTTCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: CSFPVCGQLYTVTCSQGRKRRWR*WSSSSR
Trigger: CCGGGAGGAAGAACTCCAGCACCTCCACCTCCTCTT...GCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGGAAGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGGGCTTTGGCCAAGCTTaGTGCGTAACTGTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: CVWPAVHSDMLPRPRHRRGFGQA*CVTVQG
Trigger: TCCTTGGACAGTTACGCAGCAAGCTTGGCCAAAGCC...CCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GAACCCAAGAGCCACAGCCAGGCAGTCACTCTGTCACTACAGGACAGAGCTGTCCAGGGTGGGCCAGTCTaGAAGAGGCCTGTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: EPKSHSQAVTLSLQDRAVQGGPV*KRPVAV
Trigger: GACAGCCACAGGCCTCTTGCAGACTGGCCCACCCTG...GACAGCTCTGTCCTGTAGTGACAGAGTGACTGCCTGGCTGTGGCTCTTGGGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGCTTGGGAGTGTGCCATaGAGAACTGAGGCCAGCTAT +
Preference number: 4 (lower is better)
Translates to: CVWPAVHSDMLPRPRHRRLGSVP*RTEASY
Trigger: ATAGCTGGCCTCAGTTCTGCATGGCACACTCCCAAG...CCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCTGGGTGCGTTTCAAAGCCAAGCTaGTGCACTCAAGAATGCCTA +
Preference number: 4 (lower is better)
Translates to: HQQVAPLRTAPKRSAPGCVSKPS*CTQECL
Trigger: TAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAAC...GCACCCAGGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TCCCTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCCTGCTCTCTATTGCCTaGTCTTCCTCACCACATCCC +
Preference number: 4 (lower is better)
Translates to: SLLAPAGGATEDRSEALCLLSIA*SSSPHP
Trigger: GGGATGTGGTGAGGAAGAGCAGGCAATAGAGAGCAG...GCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGAGACCTCAGACAATTaGCCTGGATTCTGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: PVCGQLYTVTCSQGRGTGETSDN*PGFCVP
Trigger: GGGGACACAGAATCCAGGGCAATTGTCTGAGGTCTC...GCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCCACCTCGGCGTGGGGTaGGCAGAGCATGCTGGACGA +
Preference number: 4 (lower is better)
Translates to: RINHVEAPGRSRVIRKKCHLGVG*AEHAGR
Trigger: TCGTCCAGCATGCTCTGCCCACCCCACGCCGAGGTG...GCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
CDS-3UTR CCA 90 bp GGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCAGGAGGTGGAGGTGCTaGAGTTCTTCCTCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: GPVLELRVPHCPHQPCRGRRWRC*SSSSRS
Trigger: GGACCGGGAGGAAGAACTCCAGCACCTCCACCTCCT...GCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTTGCCTGAAGAGGAGGTaGAGGTGCTGGAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: RVPHCPHQPCRGTRTVACCLKRR*RCWSSS
Trigger: GGAAGAACTCCAGCACCTCCACCTCCTCTTCAGGCA...ACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TGCTCCTTCCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGCTCCTTCTCTTGGGTaGGCAAGTGCAGTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: CSFPVCGQLYTVTCSQGRAPSLG*ASAVRG
Trigger: CCCTCTCACTGCACTTGCCCACCCAAGAGAAGGAGC...GCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGGAAGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CCTGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCGGCCTCAATGGCTTTaGCCAAGCTTGCTGCGTAAC +
Preference number: 4 (lower is better)
Translates to: PGCFLCGPVLELRVPHCPRPQWL*PSLLRN
Trigger: GTTACGCAGCAAGCTTGGCCAAAGCCATTGAGGCCG...CGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATCGGCCTCAATGGCTTTaGCCAAGCTTGCTGCGTAAC +
Preference number: 4 (lower is better)
Translates to: CGQLYTVTCSQGRGTGGDRPQWL*PSLLRN
Trigger: GTTACGCAGCAAGCTTGGCCAAAGCCATTGAGGCCG...ATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTGGCTTCGGCCTCAATaGCTTTGGCCAAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: QLYTVTCSQGRGTGGDGNWLRPQ*LWPSLL
Trigger: CAGCAAGCTTGGCCAAAGCCATTGAGGCCGAAGCCA...GTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCTGTAACCAAGACCCCTaGCAAAGCCTCCTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: LLAPAGGATEDRSEALCSCNQDP*QSLLPK
Trigger: TTTGGGGAGGAGGCTTTGCCAGGGGTCTTGGTTACA...GGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACCTCCTTCCCTGTGTGTaGCCAGCTGTACACAGTGAC +
Preference number: 4 (lower is better)
Translates to: QLYTVTCSQGRGTGGDGNLLPCV*PAVHSD
Trigger: GTCACTGTGTACAGCTGGCCACACACAGGGAAGGAG...GTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCCAGTCCTTGTCCTGGTaGCTGCATACCAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: LYTVTCSQGRGTGGDGNSQSLSW*LHTRCC
Trigger: GCAGCATCTGGTATGCAGCCACCAGGACAAGGACTG...GGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGTTTCAGTCCTTGTCCTaGTGGCTGCATACCAGATGC +
Preference number: 4 (lower is better)
Translates to: GQLYTVTCSQGRGTGGDGFQSLS*WLHTRC
Trigger: GCATCTGGTATGCAGCCACCAGGACAAGGACTGAAA...CCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCTGCAGAAAGAAGCTCACATGTaGTCTCTGGAAATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: RGTGGDGNSSPGQPLRLQKEAHM*SLEMLK
Trigger: CTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTT...CTGCAGCCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp ATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCCCATGCCCAAGCCCTTCGTCTCTaGTCCTCCCATGCCCCACCT +
Preference number: 4 (lower is better)
Translates to: MMHVGVSFQALRLWSSHAQALRL*SSHAPP
Trigger: AGGTGGGGCATGGGAGGACCAGAGACGAAGGGCTTG...GGCATGGGAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp ATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCCCATGCCGAAGCGCTCTGCTCCTaGGTGCTTTCTCTGCGGACC +
Preference number: 4 (lower is better)
Translates to: MMHVGVSFQALRLWSSHAEALCS*VLSLRT
Trigger: GGTCCGCAGAGAAAGCACCCAGGAGCAGAGCGCTTC...GGCATGGGAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TCCCTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCTGCAAGAGGCCTGTaGCTGTCCCTATTAGCACCA +
Preference number: 4 (lower is better)
Translates to: SLLAPAGGATEDRSEALCSARGL*LSLLAP
Trigger: TGGTGCTAATAGGGACAGCCACAGGCCTCTTGCAGA...GCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TCCCTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCGCCCCTCATGCATCTTaGTGGCTGGCATTCTATCCA +
Preference number: 4 (lower is better)
Translates to: SLLAPAGGATEDRSEALCAPHAS*WLAFYP
Trigger: TGGATAGAATGCCAGCCACCAAGATGCATGAGGGGC...GCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GATGGGGTCATGCATGTAAGCAGGCTAGCCAGGTGGTCCTTGGTCACCAAGGCCATAGCCCAGCTAGTGTaGGGTCAGTGGGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: DGVMHVSRLARWSLVTKAIAQLV*GQWGSG
Trigger: CCCACTCCCCCACTGACCCCACACTAGCTGGGCTAT...GGCCTTGGTGACCAAGGACCACCTGGCTAGCCTGCTTACATGCATGACCCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCATAGCCCAGCTAGTGTaGGGTCAGTGGGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: GPVLELRVPHCPHQPCRGIAQLV*GQWGSG
Trigger: CCCACTCCCCCACTGACCCCACACTAGCTGGGCTAT...GCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TGCTCCTTCCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGTGCCACTGTCCATGTaGTCCCATCAGGAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: CSFPVCGQLYTVTCSQGRVPLSM*SHQEGC
Trigger: GCAGCCTTCCTGATGGGACCACATGGACAGTGGCAC...GCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGGAAGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCTGCAGTGTGAATGTATCTTGTaGTCCATCCAGAGACATGTC +
Preference number: 4 (lower is better)
Translates to: RGTGGDGNSSPGQPLRLQCECIL*SIQRHV
Trigger: GACATGTCTCTGGATGGACCACAAGATACATTCACA...CTGCAGCCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGCTCAGACAATTGCCCTaGATTCTGTGTCCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: CVWPAVHSDMLPRPRHRRLRQLP*ILCPLS
Trigger: GGAGAGGGGACACAGAATCCAGGGCAATTGTCTGAG...CCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TGCTCCTTCCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCCGCCGTGGACGATCCTaGTATCGCCTTTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: CSFPVCGQLYTVTCSQGRRRGRS*YRLCCS
Trigger: TGAGCAGCAAAGGCGATACCAGGATCGTCCACGGCG...GCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGGAAGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367835.1
ENST00000537209.5
CDS-3UTR CCA 90 bp GCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGCCCAGCAGAATGGGGTaGGCCTCTCAGAAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: ARINHVEAPGRSRVIRKKPSRMG*ASQKPQ
Trigger: CTGGGGCTTCTGAGAGGCCCACCCCATTCTGCTGGG...CTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539777.5
CDS-3UTR TCA 90 bp AAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGGCACCTTGCGTGCCTTaGCCCTGGCCACGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: KKCCVILHSTLGRVLLLRAPCVP*PWPRGR
Trigger: TCTTCCGCGTGGCCAGGGTCAAGGCACGCAAGGTGC...CCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp ATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCCCATGCCCATCCTCCTCCACGATaGCGACTGTGCCACAGTGCA +
Preference number: 4 (lower is better)
Translates to: MMHVGVSFQALRLWSSHAHPPPR*RLCHSA
Trigger: TGCACTGTGGCACAGTCGTCATCGTGGAGGAGGATG...GGCATGGGAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AGAGCTGGGCCAATAACCCAGGTTGCTGGCTGTGGGTCCAGGGCTGCTTCTATCATTCCTCCTGCTGCCTaGAGAGGAGGTGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: RAGPITQVAGCGSRAASIIPPAA*RGGGGA
Trigger: AGCACCTCCACCTCCTCTTCAGGCAGCAGGAGGAAT...GATAGAAGCAGCCCTGGACCCACAGCCAGCAACCTGGGTTATTGGCCCAGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCTCCTGTTGGAAATGCTaGAGAGCCTGGAAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: LLAPAGGATEDRSEALCSSCWKC*RAWKSS
Trigger: AGAGGACTTCCAGGCTCTTCAGCATTTCCAACAGGA...GGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGAGTCCTGGGAGCAGCTaGAGCCAGTGTCCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: KKCCVILHSTLGRVLLLRSPGSS*SQCPPC
Trigger: GCACGGGGGACACTGGCTTCAGCTGCTCCCAGGACT...CCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACCATCATATCTGTCCCTaGGTCCTGGGAGCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: QLYTVTCSQGRGTGGDGNHHICP*VLGAAE
Trigger: TTCAGCTGCTCCCAGGACTCAGGGACAGATATGATG...GTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGCCTCCCCAAATAAGTTaGTTTTGGCTTCGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: GQLYTVTCSQGRGTGGDGPPQIS*FWLRPQ
Trigger: TTGAGGCCGAAGCCAAAATCAACTTATTTGGGGAGG...CCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp ATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCTGTAGCAGGTGGCGCCACTaGGGACCGCTCCGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: INHVEAPGRSRVIRKKCCSRWRH*GPLRSA
Trigger: AGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCT...ACAGCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GGAGGAAATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCCTGTGCTTCCCCTTCTaGGATGGTGACCCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: GGNDACGGLLPSPSSLVLLCFPF*DGDPAP
Trigger: AGGGGCAGGGTCACCATCTCAGAAGGGGAAGCACAG...GAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCATTTCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTAGGCGGAAATCTCAATaGAAGAGGCAGAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: RVPHCPHQPCRGTRTVACRRKSQ*KRQRWA
Trigger: TGCCCACCTCTGCCTCTTTCATTGAGATTTCCGCCT...ACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TGCTCCTTCCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCTGTCTGCCAGGCCTGTaGTTCTCCCTAGGACTGTCT +
Preference number: 4 (lower is better)
Translates to: CSFPVCGQLYTVTCSQGRCLPGL*FSLGLS
Trigger: AGACAGTCCTAGGGAGAATCACAGGCCTGGCAGACA...GCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGGAAGGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AGAGCTGGGCCAATAACCCAGGTTGCTGGCTGTGGGTCCAGGGCTGCTTCTATCAACAGGTCTTCACACTaGTGCCCTGCACTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: RAGPITQVAGCGSRAASINRSSH*CPALPR
Trigger: CCGAGGGAGTGCAGGGCAGCAGTGTGAAGACCTGTT...GATAGAAGCAGCCCTGGACCCACAGCCAGCAACCTGGGTTATTGGCCCAGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCCCATGCCGCACGAGCATCCATCTaGCTTCTGCCAGGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: MMHVGVSFQALRLWSSHAARASI*LLPGSV
Trigger: GACAGAGCCTGGCAGAAGGCAGATGGATGCTCGTGC...GGCATGGGAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATCAAAGATCCATTCCCTaGGGATGGAGCTCGTCACCA +
Preference number: 4 (lower is better)
Translates to: CGQLYTVTCSQGRGTGGDQRSIP*GWSSSP
Trigger: TGGTGACGAGCTCCATCCGCAGGGAATGGATCTTTG...ATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367838.5
ENST00000537209.5
CDS-3UTR GCA 90 bp TGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCAGAAAGGCATTCCTCCTaGTGCCTGAAGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: WVLSLRTSPRTEGPTLPAERHSS*CLKRRW
Trigger: CCACCTCCTCTTCAGGCAGCAGGAGGAATGCCTTTC...TGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCCCATGCCCTGTACACAGTGACATaGTCCCAAGGCCGCGGCACA +
Preference number: 4 (lower is better)
Translates to: MMHVGVSFQALRLWSSHALYTVT*SQGRGT
Trigger: TGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAG...GGCATGGGAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTGGCTGCATACCAGATaGTGCTCCTTCCCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: QLYTVTCSQGRGTGGDGNWLHTR*CSFPVC
Trigger: ACACACAGGGAAGGAGCAGCATCTGGTATGCAGCCA...GTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GGAGGAAATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCCGCTCCGAAGCGCTCTaGTCCTGGGTGCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: GGNDACGGLLPSPSSLVLRSEAL*SWVLSL
Trigger: CAGAGAAAGCACCCAGGAGCAGAGCGCTTCGGAGCG...GAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCATTTCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCCAGGGTGGGCCAGTCTaGAAGAGGCCTGTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: RINHVEAPGRSRVIRKKCQGGPV*KRPVAV
Trigger: GACAGCCACAGGCCTCTTGCAGACTGGCCCACCCTG...GCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CCTGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCTTGGGAGTGTGCCATaGAGAACTGAGGCCAGCTAT +
Preference number: 4 (lower is better)
Translates to: PGCFLCGPVLELRVPHCPLGSVP*RTEASY
Trigger: ATAGCTGGCCTCAGTTCTGCATGGCACACTCCCAAG...CGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGCCTGTTCCACCTCTGTaGACACTAGTTGATCAGGAA +
Preference number: 4 (lower is better)
Translates to: GQLYTVTCSQGRGTGGDGPVPPL*TLVDQE
Trigger: TTCCTGATCAACTAGTGTGCACAGAGGTGGAACAGG...CCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGTGCTGCACTCAAGAATaGCTACACCTAACCAGCAAC +
Preference number: 4 (lower is better)
Translates to: GQLYTVTCSQGRGTGGDGCCTQE*LHLTSN
Trigger: GTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCA...CCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGGGGGTTTCGACCTTCTaGACTAACGGCAGATATCCT +
Preference number: 4 (lower is better)
Translates to: PCVWPAVHSDMLPRPRHRGVSTF*TNGRYP
Trigger: AGGATATCTGCCGTTAGTGCAGAAGGTCGAAACCCC...CCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGCACATGCCAGCTCACTaGCTCCTCTTTATAGCCACA +
Preference number: 4 (lower is better)
Translates to: CVWPAVHSDMLPRPRHRRHMPAH*LLFIAT
Trigger: TGTGGCTATAAAGAGGAGGCAGTGAGCTGGCATGTG...CCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TGCTCCTTCCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCCAGAAGGCAGTCACATaGCAGCTCACTGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: CSFPVCGQLYTVTCSQGRQKAVT*QLTASS
Trigger: AGAGGAGGCAGTGAGCTGGCATGTGACTGCCTTCTG...GCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGGAAGGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCCCATGCCTGGCTCAGCTTCAGCTaGACCCCAGGCATTGTGCTG +
Preference number: 4 (lower is better)
Translates to: MMHVGVSFQALRLWSSHAWLSFS*TPGIVL
Trigger: CAGCACAATGCCTGGGGTGCAGCTGAAGCTGAGCCA...GGCATGGGAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCACAGTGTGGTCTTGTCTaGCAGGCCTGTGATTCTCCC +
Preference number: 4 (lower is better)
Translates to: WVLSLRTSPRTEGPTLPAQCGLV*QACDSP
Trigger: GGGAGAATCACAGGCCTGGCAGACAAGACCACACTG...TGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCGCAGGTTCCTTCTACTaGTCTCAGTGTGGTCTTGTC +
Preference number: 4 (lower is better)
Translates to: LLAPAGGATEDRSEALCSAGSFY*SQCGLV
Trigger: GACAAGACCACACTGAGAGCAGTAGAAGGAACCTGC...GGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGCATCTGGCACAGCCAACCAAACAGGGGTaGCAGGCAGCCGATGAGCGA +
Preference number: 4 (lower is better)
Translates to: VILHSTLGRVLLLRHLAQPTKQG*QAADER
Trigger: TCGCTCATCGGCTGCCTGCCACCCCTGTTTGGTTGG...CTGTGCCAGATGCCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GAACCCAAGAGCCACAGCCAGGCAGTCACTCTGTCACTACAGGACAGAGCTGTCCCAACCAAACAGGGGTaGCAGGCAGCCGATGAGCGA +
Preference number: 4 (lower is better)
Translates to: EPKSHSQAVTLSLQDRAVPTKQG*QAADER
Trigger: TCGCTCATCGGCTGCCTGCCACCCCTGTTTGGTTGG...GACAGCTCTGTCCTGTAGTGACAGAGTGACTGCCTGGCTGTGGCTCTTGGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATTGTAACCAAGACCCCTaGCAAAGCCTCCTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: CGQLYTVTCSQGRGTGGDCNQDP*QSLLPK
Trigger: TTTGGGGAGGAGGCTTTGCCAGGGGTCTTGGTTACA...ATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTTGTAACCAAGACCCCTaGCAAAGCCTCCTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: RVPHCPHQPCRGTRTVACCNQDP*QSLLPK
Trigger: TTTGGGGAGGAGGCTTTGCCAGGGGTCTTGGTTACA...ACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTTGCAACTGCAGCCTCTaGCTCACAAGAGTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: RVPHCPHQPCRGTRTVACCNCSL*LTRVLL
Trigger: CAGCAGAACTCTTGTGAGCCAGAGGCTGCAGTTGCA...ACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTGCAACTGCAGCCTCTaGCTCACAAGAGTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: LYTVTCSQGRGTGGDGNSCNCSL*LTRVLL
Trigger: CAGCAGAACTCTTGTGAGCCAGAGGCTGCAGTTGCA...GGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCACTCCTTCCCTGTGTGTaGCCAGCTGTACACAGTGAC +
Preference number: 4 (lower is better)
Translates to: WVLSLRTSPRTEGPTLPALLPCV*PAVHSD
Trigger: GTCACTGTGTACAGCTGGCCACACACAGGGAAGGAG...TGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TGCTCCTTCCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCCAGTCCTTGTCCTGGTaGCTGCATACCAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: CSFPVCGQLYTVTCSQGRQSLSW*LHTRCC
Trigger: GCAGCATCTGGTATGCAGCCACCAGGACAAGGACTG...GCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGGAAGGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCTTTCAGTCCTTGTCCTaGTGGCTGCATACCAGATGC +
Preference number: 4 (lower is better)
Translates to: PVCGQLYTVTCSQGRGTGFQSLS*WLHTRC
Trigger: GCATCTGGTATGCAGCCACCAGGACAAGGACTGAAA...GCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GAACCCAAGAGCCACAGCCAGGCAGTCACTCTGTCACTACAGGACAGAGCTGTCCAAGCCCTTCGTCTCTaGTCCTCCCATGCCCCACCT +
Preference number: 4 (lower is better)
Translates to: EPKSHSQAVTLSLQDRAVQALRL*SSHAPP
Trigger: AGGTGGGGCATGGGAGGACCAGAGACGAAGGGCTTG...GACAGCTCTGTCCTGTAGTGACAGAGTGACTGCCTGGCTGTGGCTCTTGGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAGTAACTGTTGCTCTTaGGAGTGTGCCATGCAGAAC +
Preference number: 4 (lower is better)
Translates to: GQLYTVTCSQGRGTGGDGSNCCS*ECAMQN
Trigger: GTTCTGCATGGCACACTCCCAAGAGCAACAGTTACT...CCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATCTACAGAGCCTAGCCTaGTGCTTCGCATACACTGGA +
Preference number: 4 (lower is better)
Translates to: CGQLYTVTCSQGRGTGGDLQSLA*CFAYTG
Trigger: TCCAGTGTATGCGAAGCACCAGGCTAGGCTCTGTAG...ATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GATGGGGTCATGCATGTAAGCAGGCTAGCCAGGTGGTCCTTGGTCACCAAGGCCGTGCCACTGTCCATGTaGTCCCATCAGGAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: DGVMHVSRLARWSLVTKAVPLSM*SHQEGC
Trigger: GCAGCCTTCCTGATGGGACCACATGGACAGTGGCAC...GGCCTTGGTGACCAAGGACCACCTGGCTAGCCTGCTTACATGCATGACCCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGGTGTGCTCTGTAATGTaGGACTCCCAATGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: CVWPAVHSDMLPRPRHRRVCSVM*DSQCLL
Trigger: CAGAAGGCATTGGGAGTCCCACATTACAGAGCACAC...CCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCACCTGTGAACCTGGATaGGGTCATGCATGTAAGCAG +
Preference number: 4 (lower is better)
Translates to: LLAPAGGATEDRSEALCSTCEPG*GHACKQ
Trigger: CTGCTTACATGCATGACCCCATCCAGGTTCACAGGT...GGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGGTTCTGCATATATTGTaGGTAGCATCCCTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: PCVWPAVHSDMLPRPRHRVLHIL*VASLPC
Trigger: GCAGGGCAGGGATGCTACCCACAATATATGCAGAAC...CCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCCCACAGGCTCCATCTaGGGTTCTGCATATATTGTG +
Preference number: 4 (lower is better)
Translates to: PCVWPAVHSDMLPRPRHRPTGSI*GSAYIV
Trigger: CACAATATATGCAGAACCCCAGATGGAGCCTGTGGG...CCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTGGACGTGGAGTCTCTTaGCCCCAGGGGGCGCGGCCC +
Preference number: 4 (lower is better)
Translates to: GPKRSSHVVSGNAEAVDCGRGVS*PQGARP
Trigger: GGGCCGCGCCCCCTGGGGCCAAGAGACTCCACGTCC...ACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367836.5
ENST00000367838.5
ENST00000539777.5
CDS-3UTR TCA 90 bp CCTGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCCACACACATCCATTTaGACTCGTCAAACTCCACGG +
Preference number: 4 (lower is better)
Translates to: PGCFLCGPVLELRVPHCPPHTSI*TRQTPR
Trigger: CCGTGGAGTTTGACGAGTTCAAATGGATGTGTGTGG...CGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGCATCTGGCACAGTGGCCACGCGGAAGATaGAGCCATAGCACACCAGCA +
Preference number: 4 (lower is better)
Translates to: VILHSTLGRVLLLRHLAQWPRGR*SHSTPA
Trigger: TGCTGGTGTGCTATGGCTTCATCTTCCGCGTGGCCA...CTGTGCCAGATGCCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GGAGGAAATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCCATCCTCCTCCACGATaGCGACTGTGCCACAGTGCA +
Preference number: 4 (lower is better)
Translates to: GGNDACGGLLPSPSSLVLHPPPR*RLCHSA
Trigger: TGCACTGTGGCACAGTCGTCATCGTGGAGGAGGATG...GAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCATTTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GGCCGTGGACTACACGATAAGGGCAAAGGAATTCAAAACAAGAGTGCCCAGCCAGGGCCTCAGAGGCGATaGCAACCATGTAGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: GRGLHDKGKGIQNKSAQPGPQRR*QPCRGP
Trigger: GGGGCCCCTACATGGTTGTCATCGCCTCTGAGGCCC...TGGCTGGGCACTCTTGTTTTGAATTCCTTTGCCCTTATCGTGTAGTCCACGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp ATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCTGTGGGCCTCAGAGGCGATaGCAACCATGTAGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: INHVEAPGRSRVIRKKCCGPQRR*QPCRGP
Trigger: GGGGCCCCTACATGGTTGTCATCGCCTCTGAGGCCC...ACAGCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CCTGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGTCCTGTTGGAAATGCTaGAGAGCCTGGAAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: PGCFLCGPVLELRVPHCPSCWKC*RAWKSS
Trigger: AGAGGACTTCCAGGCTCTTCAGCATTTCCAACAGGA...CGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TGCTCCTTCCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGTGAAGAGGAGGAAATaGTGCATGTGGGGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: CSFPVCGQLYTVTCSQGRVKRRK*CMWGSP
Trigger: AGGAGACCCCCACATGCATCATTTCCTCCTCTTCAC...GCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGGAAGGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCTGGGTGCGTGGTTTCTCCCTTTTaGAATACCAAAGAACTTGTC +
Preference number: 4 (lower is better)
Translates to: HQQVAPLRTAPKRSAPGCVVSPF*NTKELV
Trigger: GACAAGTTCTTTGGTATTTCAAAAGGGAGAAACCAC...GCACCCAGGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TCCCTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCCACTTCACATGTGCATaGGCAACCACACTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: SLLAPAGGATEDRSEALCHFTCA*ATTLQS
Trigger: ACTTTGGAGTGTGGTTGCTCATGCACATGTGAAGTG...GCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCAAAGCCACAGAACCTTaGTCTGCCTGCACTTCACAT +
Preference number: 4 (lower is better)
Translates to: LLAPAGGATEDRSEALCSKATEP*SACTSH
Trigger: ATGTGAAGTGCAGGCAGATCAAGGTTCTGTGGCTTT...GGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGATACCCACCTCCCTCTaGAGCCACACTTCTTTCTAT +
Preference number: 4 (lower is better)
Translates to: PCVWPAVHSDMLPRPRHRIPTSL*SHTSFY
Trigger: ATAGAAAGAAGTGTGGCTTCAGAGGGAGGTGGGTAT...CCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGTGGCTTAACTTACTTTaGGACCTCAGACAATTGCCC +
Preference number: 4 (lower is better)
Translates to: GQLYTVTCSQGRGTGGDGWLNLL*DLRQLP
Trigger: GGGCAATTGTCTGAGGTCTCAAAGTAAGTTAAGCCA...CCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCATTCCTCTGGGAGGACTaGCTCACCTGTGATTTGTGG +
Preference number: 4 (lower is better)
Translates to: WVLSLRTSPRTEGPTLPAFLWED*LTCDLW
Trigger: CCACAAATCACAGGTGAGTCAGTCCTCCCAGAGGAA...TGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp ATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCCCATGCCTGTCTGCCAGGCCTGTaGTTCTCCCTAGGACTGTCT +
Preference number: 4 (lower is better)
Translates to: MMHVGVSFQALRLWSSHACLPGL*FSLGLS
Trigger: AGACAGTCCTAGGGAGAATCACAGGCCTGGCAGACA...GGCATGGGAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TCCCTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCAGCGGTCTATTATaGGAACACAACACAGTCCTC +
Preference number: 4 (lower is better)
Translates to: SLLAPAGGATEDRSEALCSSGLL*EHNTVL
Trigger: GAGGACTGTGTTGTGTTCTCATAATAGACCGCTGGA...GCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCCCAGATGTAGACAAGTaGCATCACAGCCCGGTTCCC +
Preference number: 4 (lower is better)
Translates to: GPVLELRVPHCPHQPCRGPDVDK*HHSPVP
Trigger: GGGAACCGGGCTGTGATGGCACTTGTCTACATCTGG...GCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGACAGTGCACCTTGCGTaGCTTGACCCTGGCCACGCG +
Preference number: 4 (lower is better)
Translates to: KKCCVILHSTLGRVLLLRTVHLA*LDPGHA
Trigger: CGCGTGGCCAGGGTCAAGGCACGCAAGGTGCACTGT...CCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGCATCTGGCACAGAAGAGGAGGTGGAGGTaGTGGAGTTCTTCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: VILHSTLGRVLLLRHLAQKRRWR*WSSSSR
Trigger: CCGGGAGGAAGAACTCCAGCACCTCCACCTCCTCTT...CTGTGCCAGATGCCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTTTGGCCAAGCTTGCTaGGTAACTGTCCAAGGACTT +
Preference number: 4 (lower is better)
Translates to: CVWPAVHSDMLPRPRHRRFGQAC*VTVQGL
Trigger: AAGTCCTTGGACAGTTACGCAGCAAGCTTGGCCAAA...CCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCTGTGGCTCACAAGAGTTCTaGTGCCTCGGCGGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: INHVEAPGRSRVIRKKCCGSQEF*CLGGPR
Trigger: TCGGGGGCCGCCGAGGCAGCAGAACTCTTGTGAGCC...ACAGCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AGTCACCCTGTGACGGAGGACTCCCTCAATCCTGTGTGTCTCCACATTGAAACAGGCTCACAAGAGTTCTaGTGCCTCGGCGGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: SHPVTEDSLNPVCLHIETGSQEF*CLGGPR
Trigger: TCGGGGGCCGCCGAGGCAGCAGAACTCTTGTGAGCC...TGTTTCAATGTGGAGACACACAGGATTGAGGGAGTCCTCCGTCACAGGGTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GATGGGGTCATGCATGTAAGCAGGCTAGCCAGGTGGTCCTTGGTCACCAAGGCCCCTTCTTCGATGCTCTaGAACTGCAGCCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: DGVMHVSRLARWSLVTKAPSSML*NCSLWL
Trigger: GAGCCAGAGGCTGCAGTTGCAGAGCATCGAAGAAGG...GGCCTTGGTGACCAAGGACCACCTGGCTAGCCTGCTTACATGCATGACCCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCCATCTCCTTCTTCGATaGTCTGCAACTGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LYTVTCSQGRGTGGDGNSHLLLR*SATAAS
Trigger: AGAGGCTGCAGTTGCAGAGCATCGAAGAAGGAGATG...GGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCCCATGCCCCTTGTCCTGGTGGCTaGATACCAGATGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: MMHVGVSFQALRLWSSHAPCPGG*IPDAAP
Trigger: AGGAGCAGCATCTGGTATGCAGCCACCAGGACAAGG...GGCATGGGAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCAGGCATCTGGCACAGTaGACGGCTGGACTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: RINHVEAPGRSRVIRKKCRHLAQ*TAGLPA
Trigger: TGCTGGGAGTCCAGCCGTGCACTGTGCCAGATGCCT...GCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGTCTATTTCCTGGCTGTaGTTGGCACTACAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: PCVWPAVHSDMLPRPRHRSISWL*LALQSH
Trigger: ATGGGACTGTAGTGCCAAGCACAGCCAGGAAATAGA...CCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCCACAGAACCTTGATCTaGCTGCACTTCACATGTGCA +
Preference number: 4 (lower is better)
Translates to: LLAPAGGATEDRSEALCSHRTLI*LHFTCA
Trigger: TGCACATGTGAAGTGCAGGCAGATCAAGGTTCTGTG...GGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCGGTGAACCTGCCCTCTaGTCCTTCCCACTCCCATCC +
Preference number: 4 (lower is better)
Translates to: RINHVEAPGRSRVIRKKCGEPAL*SFPLPS
Trigger: GGATGGGAGTGGGAAGGAGCAGAGGGCAGGTTCACC...GCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GAACCCAAGAGCCACAGCCAGGCAGTCACTCTGTCACTACAGGACAGAGCTGTCGCAGAGTGTCTGACCTaGACAGGTGAACCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: EPKSHSQAVTLSLQDRAVAECLT*TGEPAL
Trigger: GAGGGCAGGTTCACCTGTGCAGGTCAGACACTCTGC...GACAGCTCTGTCCTGTAGTGACAGAGTGACTGCCTGGCTGTGGCTCTTGGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCTGCTGCACTCAAGAATaGCTACACCTAACCAGCAAC +
Preference number: 4 (lower is better)
Translates to: PVCGQLYTVTCSQGRGTGCCTQE*LHLTSN
Trigger: GTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCA...GCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TCCCTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCAAAGCCAAGCTGCTaGACTCAAGAATGCCTACAC +
Preference number: 4 (lower is better)
Translates to: SLLAPAGGATEDRSEALCSKPSC*TQECLH
Trigger: GTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGA...GCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTGGTATCCACAGGTCCTaGTCCCTAAATCAGAGTGCA +
Preference number: 4 (lower is better)
Translates to: RVPHCPHQPCRGTRTVACGIHRS*SLNQSA
Trigger: TGCACTCTGATTTAGGGAGCAGGACCTGTGGATACC...ACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCTGTCAAAGCAAGGCGCAGTaGGGGCGGAGGACAGCCCTG +
Preference number: 4 (lower is better)
Translates to: INHVEAPGRSRVIRKKCCQSKAQ*GRRTAL
Trigger: CAGGGCTGTCCTCCGCCCGCACTGCGCCTTGCTTTG...ACAGCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539777.5
CDS-3UTR CCA 90 bp TGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATTCATGGGGTACACCATaGGGTACAGGACAGCATAGT +
Preference number: 4 (lower is better)
Translates to: CGQLYTVTCSQGRGTGGDSWGTP*GTGQHS
Trigger: ACTATGCTGTCCTGTACCCCATGGTGTACCCCATGA...ATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCTGCCTGAAGAGGAGGTaGAGGTGCTGGAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: GPVLELRVPHCPHQPCRGCLKRR*RCWSSS
Trigger: GGAAGAACTCCAGCACCTCCACCTCCTCTTCAGGCA...GCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGGAAATGCTGAAGCTGTaGACTGTAGACATTATTTTC +
Preference number: 4 (lower is better)
Translates to: QGRGTGGDGNSSPGQPLREMLKL*TVDIIF
Trigger: GAAAATAATGTCTACAGTCCACAGCTTCAGCATTTC...CCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCTGCTTTAGATGCTTCTaGTCCCATCACTGGGACCTA +
Preference number: 4 (lower is better)
Translates to: LLAPAGGATEDRSEALCSCFRCF*SHHWDL
Trigger: TAGGTCCCAGTGATGGGACCAGAAGCATCTAAAGCA...GGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCTGCAGAGTCCGGTAAAACAGTaGTACGTCTTAAATGGATTT +
Preference number: 4 (lower is better)
Translates to: RGTGGDGNSSPGQPLRLQSPVKQ*YVLNGF
Trigger: AAATCCATTTAAGACGTACCACTGTTTTACCGGACT...CTGCAGCCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAGTTTCTCTATTTCCTaGCTGTGCTTGGCACTACAG +
Preference number: 4 (lower is better)
Translates to: GQLYTVTCSQGRGTGGDGSFSIS*LCLALQ
Trigger: CTGTAGTGCCAAGCACAGCCAGGAAATAGAGAAACT...CCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCCCTCATGCATCTTGGTaGCTGGCATTCTATCCAGAT +
Preference number: 4 (lower is better)
Translates to: LLAPAGGATEDRSEALCSPHASW*LAFYPD
Trigger: ATCTGGATAGAATGCCAGCCACCAAGATGCATGAGG...GGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GAACCCAAGAGCCACAGCCAGGCAGTCACTCTGTCACTACAGGACAGAGCTGTCGTGCCACTGTCCATGTaGTCCCATCAGGAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: EPKSHSQAVTLSLQDRAVVPLSM*SHQEGC
Trigger: GCAGCCTTCCTGATGGGACCACATGGACAGTGGCAC...GACAGCTCTGTCCTGTAGTGACAGAGTGACTGCCTGGCTGTGGCTCTTGGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TGCTCCTTCCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCCCTGAACTTCAGTCTTaGTGCCTCTGGCCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: CSFPVCGQLYTVTCSQGRPELQS*CLWPGK
Trigger: TTTCCCTGGCCAGAGGCACCAAGACTGAAGTTCAGG...GCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGGAAGGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCCCACAGGCTCCATCTaGGGTTCTGCATATATTGTG +
Preference number: 4 (lower is better)
Translates to: RVPHCPHQPCRGTRTVACPTGSI*GSAYIV
Trigger: CACAATATATGCAGAACCCCAGATGGAGCCTGTGGG...ACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCTGCAGTCTTATAGGCATATATaGCTAATCACAGCCATTCTC +
Preference number: 4 (lower is better)
Translates to: RGTGGDGNSSPGQPLRLQSYRHI*LITAIL
Trigger: GAGAATGGCTGTGATTAGCCATATATGCCTATAAGA...CTGCAGCCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGCTTTTCTCATCCCCTTaGCCAAGACTTGGAGTTTGG +
Preference number: 4 (lower is better)
Translates to: CVWPAVHSDMLPRPRHRRLFSSP*PRLGVW
Trigger: CCAAACTCCAAGTCTTGGCCAAGGGGATGAGAAAAG...CCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR CAA 72 bp GGGGTCATGCATGTAAGCAGGCTAGCCAGGTGGTCCTaGGTCACCAAGGCCGTGGACTACACGATAAGGGCA +
Preference number: 4 (lower is better)
Translates to: GVMHVSRLARWS*VTKAVDYTIRA
Trigger: TGCCCTTATCGTGTAGTCCACGGCCTTGGTGACCAAGGACCACCTGGCTAGCCTGCTTACATGCATGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CGCGTGTCATTAGGAAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGAGCGGTCGATGGCAATaGCCCCGAGGGTTAGCATGC +
Preference number: 4 (lower is better)
Translates to: RVSLGRSAVSSFTVHWGGSGRWQ*PRGLAC
Trigger: GCATGCTAACCCTCGGGGTCATTGCCATCGACCGCT...CCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTTCCTAATGACACGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
CDS-3UTR TCA 90 bp GGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCCATCATATCTGTCCCTaGGTCCTGGGAGCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: GPVLELRVPHCPHQPCRGHHICP*VLGAAE
Trigger: TTCAGCTGCTCCCAGGACTCAGGGACAGATATGATG...GCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCCCTCCCCAAATAAGTTaGTTTTGGCTTCGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: LYTVTCSQGRGTGGDGNSPPQIS*FWLRPQ
Trigger: TTGAGGCCGAAGCCAAAATCAACTTATTTGGGGAGG...GGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TTCCTGGCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACGCCAGCTGTACACAGTaGCATGCTCCCAAGGCCGCG +
Preference number: 4 (lower is better)
Translates to: FLAVLGTTVPFSPVKQWYASCTQ*HAPKAA
Trigger: CGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGC...GTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGCCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TGCTCCTTCCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCACTCCCAGCACACTGTaGAGAGGAGGAAATGATGCA +
Preference number: 4 (lower is better)
Translates to: CSFPVCGQLYTVTCSQGRTPSTL*RGGNDA
Trigger: TGCATCATTTCCTCCTCTTCACAGTGTGCTGGGAGT...GCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGGAAGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TCCCTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCGGTCAGAGCTGGAAATaGTCTTGGAGACCATTCAAT +
Preference number: 4 (lower is better)
Translates to: SLLAPAGGATEDRSEALCGQSWK*SWRPFN
Trigger: ATTGAATGGTCTCCAAGATCATTTCCAGCTCTGACC...GCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TCCCTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCCTGCTTTACAAATCCTaGGAACACCAAAGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: SLLAPAGGATEDRSEALCLLYKS*EHQRSE
Trigger: CTCTGACCTTTGGTGTTCTCAGGATTTGTAAAGCAG...GCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCACTTCACATGTGCATaGGCAACCACACTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: RVPHCPHQPCRGTRTVACHFTCA*ATTLQS
Trigger: ACTTTGGAGTGTGGTTGCTCATGCACATGTGAAGTG...ACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGGTGACCCAGAATAGTTaGGTTCAATCACCACAGGTA +
Preference number: 4 (lower is better)
Translates to: CVWPAVHSDMLPRPRHRRVTQNS*VQSPQV
Trigger: TACCTGTGGTGATTGAACTCAACTATTCTGGGTCAC...CCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GAACCCAAGAGCCACAGCCAGGCAGTCACTCTGTCACTACAGGACAGAGCTGTCCGCCTGGCATCCAGGTaGCCCAGAATAGTTGAGTTC +
Preference number: 4 (lower is better)
Translates to: EPKSHSQAVTLSLQDRAVRLASR*PRIVEF
Trigger: GAACTCAACTATTCTGGGTCACCTGGATGCCAGGCG...GACAGCTCTGTCCTGTAGTGACAGAGTGACTGCCTGGCTGTGGCTCTTGGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGCATCTGGCACAGTGGAAGCAGAGTGTCTaGCCTGCACAGGTGAACCTG +
Preference number: 4 (lower is better)
Translates to: VILHSTLGRVLLLRHLAQWKQSV*PAQVNL
Trigger: CAGGTTCACCTGTGCAGGTCAGACACTCTGCTTCCA...CTGTGCCAGATGCCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTTCCAGCGGTCTATTATaGGAACACAACACAGTCCTC +
Preference number: 4 (lower is better)
Translates to: RVPHCPHQPCRGTRTVACSSGLL*EHNTVL
Trigger: GAGGACTGTGTTGTGTTCTCATAATAGACCGCTGGA...ACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TGCTCCTTCCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGTCCCCAAAGCACATaGCCAGTAGTTCTTTGCGAA +
Preference number: 4 (lower is better)
Translates to: CSFPVCGQLYTVTCSQGRGPQST*PVVLCE
Trigger: TTCGCAAAGAACTACTGGGCATGTGCTTTGGGGACC...GCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGGAAGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CGTTTCAAAGCCAAGCTGCTGCACTCAAGAATGCCTACACCTAACCAGCAACCCCCCCGGGACAGTCCGTaGTGTAACCAAGACCCCTGG +
Preference number: 4 (lower is better)
Translates to: RFKAKLLHSRMPTPNQQPPRDSP*CNQDPW
Trigger: CCAGGGGTCTTGGTTACAGCACGGACTGTCCCGGGG...GGGTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAACG
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCTGTTCACAAGAGTTCTGCTaGCTCGGCGGCCCCCGAAGC +
Preference number: 4 (lower is better)
Translates to: INHVEAPGRSRVIRKKCCSQEFC*LGGPRS
Trigger: GCTTCGGGGGCCGCCGAGGCAGCAGAACTCTTGTGA...ACAGCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGCATCTGGCACAGCTGAGGGTCCCACACTaGCCGCATCAACCATGTAGA +
Preference number: 4 (lower is better)
Translates to: VILHSTLGRVLLLRHLAQLRVPH*PHQPCR
Trigger: TCTACATGGTTGATGCGGGCAGTGTGGGACCCTCAG...CTGTGCCAGATGCCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGCGCTCTGCTCCTGGGTaGTTTCTCTGCGGACCAGTC +
Preference number: 4 (lower is better)
Translates to: KKCCVILHSTLGRVLLLRRSAPG*FLCGPV
Trigger: GACTGGTCCGCAGAGAAAGCACCCAGGAGCAGAGCG...CCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCTGTGGGTCCAGGGCTaGTTCTATCTTATTTATACC +
Preference number: 4 (lower is better)
Translates to: PCVWPAVHSDMLPRPRHRLWVQG*FYLIYT
Trigger: GGTATAAATAAGATAGAAGCAGCCCTGGACCCACAG...CCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGTCCAAATGACATGTaGACACAAAGACAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: CVWPAVHSDMLPRPRHRRCPNDM*TQRQSW
Trigger: CCAGCTCTGTCTTTGTGTGCACATGTCATTTGGACA...CCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CCTGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGACATTCTCCAACCCTTaGGTTTCAAAGCCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: PGCFLCGPVLELRVPHCPTFSNP*VSKPSC
Trigger: GCAGCTTGGCTTTGAAACGCAAGGGTTGGAGAATGT...CGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACATGTGGGACTCCCAATaGCTTCTGGGTCAAAACAAC +
Preference number: 4 (lower is better)
Translates to: QLYTVTCSQGRGTGGDGNMWDSQ*LLGQNN
Trigger: GTTGTTTTGACCCAGAAGGCATTGGGAGTCCCACAT...GTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATTACACTCCTCAACTCTaGTTCTCCAGGAGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: CGQLYTVTCSQGRGTGGDYTPQL*FSRSSD
Trigger: ATCACTGCTCCTGGAGAAGCAGAGTTGAGGAGTGTA...ATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCTGGCTCAGCTTCAGCTaGACCCCAGGCATTGTGCTG +
Preference number: 4 (lower is better)
Translates to: RINHVEAPGRSRVIRKKCWLSFS*TPGIVL
Trigger: CAGCACAATGCCTGGGGTGCAGCTGAAGCTGAGCCA...GCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GAACCCAAGAGCCACAGCCAGGCAGTCACTCTGTCACTACAGGACAGAGCTGTCCAGTGTGGTCTTGTCTaGCAGGCCTGTGATTCTCCC +
Preference number: 4 (lower is better)
Translates to: EPKSHSQAVTLSLQDRAVQCGLV*QACDSP
Trigger: GGGAGAATCACAGGCCTGGCAGACAAGACCACACTG...GACAGCTCTGTCCTGTAGTGACAGAGTGACTGCCTGGCTGTGGCTCTTGGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGGTATCGCCTTTGCTaGTCACCTTTCATTCATCCA +
Preference number: 4 (lower is better)
Translates to: CVWPAVHSDMLPRPRHRRWYRLC*SPFIHP
Trigger: TGGATGAATGAAAGGTGAGCAGCAAAGGCGATACCA...CCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367835.1
ENST00000537209.5
CDS-3UTR CCA 90 bp CTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACCAGTGCACCTCGGCGTaGGGTGGGCAGAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: LGPKRSSHVVSGNAEAVDQCTSA*GGQSML
Trigger: CAGCATGCTCTGCCCACCCCACGCCGAGGTGCACTG...GTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367838.5
ENST00000537209.5
CDS-3UTR CCA 90 bp AAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGCCAACCAAACAGGGGTaGCAGGCAGCCGATGAGCGA +
Preference number: 4 (lower is better)
Translates to: KKCCVILHSTLGRVLLLRPTKQG*QAADER
Trigger: TCGCTCATCGGCTGCCTGCCACCCCTGTTTGGTTGG...CCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGAGGAGGTGGAGGTGCTaGAGTTCTTCCTCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: KKCCVILHSTLGRVLLLRRRWRC*SSSSRS
Trigger: GGACCGGGAGGAAGAACTCCAGCACCTCCACCTCCT...CCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGCATCTGGCACAGTGGCTTCGGCCTCAATaGCTTTGGCCAAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: VILHSTLGRVLLLRHLAQWLRPQ*LWPSLL
Trigger: CAGCAAGCTTGGCCAAAGCCATTGAGGCCGAAGCCA...CTGTGCCAGATGCCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCTGCAACTGCAGCCTCTaGCTCACAAGAGTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: GPVLELRVPHCPHQPCRGCNCSL*LTRVLL
Trigger: CAGCAGAACTCTTGTGAGCCAGAGGCTGCAGTTGCA...GCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGCATCTGGCACAGCTCCTTCCCTGTGTGTaGCCAGCTGTACACAGTGAC +
Preference number: 4 (lower is better)
Translates to: VILHSTLGRVLLLRHLAQLLPCV*PAVHSD
Trigger: GTCACTGTGTACAGCTGGCCACACACAGGGAAGGAG...CTGTGCCAGATGCCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGCAGTCCTTGTCCTGGTaGCTGCATACCAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: ARINHVEAPGRSRVIRKKQSLSW*LHTRCC
Trigger: GCAGCATCTGGTATGCAGCCACCAGGACAAGGACTG...CTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TGCTCCTTCCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCTTTCAGTCCTTGTCCTaGTGGCTGCATACCAGATGC +
Preference number: 4 (lower is better)
Translates to: CSFPVCGQLYTVTCSQGRFQSLS*WLHTRC
Trigger: GCATCTGGTATGCAGCCACCAGGACAAGGACTGAAA...GCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGGAAGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCTGGGTGCGAAATGCTGAAGCTGTaGACTGTAGACATTATTTTC +
Preference number: 4 (lower is better)
Translates to: HQQVAPLRTAPKRSAPGCEMLKL*TVDIIF
Trigger: GAAAATAATGTCTACAGTCCACAGCTTCAGCATTTC...GCACCCAGGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATTGCTTTAGATGCTTCTaGTCCCATCACTGGGACCTA +
Preference number: 4 (lower is better)
Translates to: CGQLYTVTCSQGRGTGGDCFRCF*SHHWDL
Trigger: TAGGTCCCAGTGATGGGACCAGAAGCATCTAAAGCA...ATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271357.9
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AGAGCTGGGCCAATAACCCAGGTTGCTGGCTGTGGGTCCAGGGCTGCTTCTATCTCTGCAAGAGGCCTGTaGCTGTCCCTATTAGCACCA +
Preference number: 4 (lower is better)
Translates to: RAGPITQVAGCGSRAASISARGL*LSLLAP
Trigger: TGGTGCTAATAGGGACAGCCACAGGCCTCTTGCAGA...GATAGAAGCAGCCCTGGACCCACAGCCAGCAACCTGGGTTATTGGCCCAGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCATTTCCTGGCTGTGCTTaGCACTACAGTCCCATTCAG +
Preference number: 4 (lower is better)
Translates to: WVLSLRTSPRTEGPTLPAFPGCA*HYSPIQ
Trigger: CTGAATGGGACTGTAGTGCCAAGCACAGCCAGGAAA...TGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCAATAACCCAGGTTGCTaGCTGTGGGTCCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RINHVEAPGRSRVIRKKCNNPGC*LWVQGC
Trigger: GCAGCCCTGGACCCACAGCCAGCAACCTGGGTTATT...GCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCACAAAGGTCGGTCCGTaGGTCTGCTTTTGTGTTTTA +
Preference number: 4 (lower is better)
Translates to: PVCGQLYTVTCSQGRGTGTKVGP*VCFCVL
Trigger: TAAAACACAAAAGCAGACCCACGGACCGACCTTTGT...GCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGACCAGCTAACCATTaGTTTCTGCCACACAACACA +
Preference number: 4 (lower is better)
Translates to: CGQLYTVTCSQGRGTGGDGPANH*FLPHNT
Trigger: TGTGTTGTGTGGCAGAAACCAATGGTTAGCTGGTCC...ATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TTCCTGGCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACGGGTCAGTGGGGGAGTaGGGGGCTGTCTCAGGATTC +
Preference number: 4 (lower is better)
Translates to: FLAVLGTTVPFSPVKQWYGSVGE*GAVSGF
Trigger: GAATCCTGAGACAGCCCCCCACTCCCCCACTGACCC...GTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGCCAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCACTCCCAATGCCTTCTaGGTCAAAACAACCCCAAAC +
Preference number: 4 (lower is better)
Translates to: LYTVTCSQGRGTGGDGNSTPNAF*VKTTPN
Trigger: GTTTGGGGTTGTTTTGACCCAGAAGGCATTGGGAGT...GGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATACTCCCAATGCCTTCTaGGTCAAAACAACCCCAAAC +
Preference number: 4 (lower is better)
Translates to: CGQLYTVTCSQGRGTGGDTPNAF*VKTTPN
Trigger: GTTTGGGGTTGTTTTGACCCAGAAGGCATTGGGAGT...ATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGCAGTCTTGGTGCCTCTaGCCAGGGAAATGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: ARINHVEAPGRSRVIRKKQSWCL*PGKWLC
Trigger: ACACAGCCATTTCCCTGGCCAGAGGCACCAAGACTG...CTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TGCTCCTTCCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCACCTGTGAACCTGGATaGGGTCATGCATGTAAGCAG +
Preference number: 4 (lower is better)
Translates to: CSFPVCGQLYTVTCSQGRTCEPG*GHACKQ
Trigger: CTGCTTACATGCATGACCCCATCCAGGTTCACAGGT...GCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGGAAGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGAACATTGGCACTAGATaGCCCTTGTCTTACACTCCT +
Preference number: 4 (lower is better)
Translates to: PCVWPAVHSDMLPRPRHRNIGTR*PLSYTP
Trigger: AGGAGTGTAAGACAAGGGCCATCTAGTGCCAATGTT...CCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGATTTGTGCTATGATTTaGAACGTTACACCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: GQLYTVTCSQGRGTGGDGICAMI*NVTPGP
Trigger: AGGGCCTGGTGTAACGTTCCAAATCATAGCACAAAT...CCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCAGTTCTGCATATATTGTaGGTAGCATCCCTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: WVLSLRTSPRTEGPTLPAVLHIL*VASLPC
Trigger: GCAGGGCAGGGATGCTACCCACAATATATGCAGAAC...TGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AGAGCTGGGCCAATAACCCAGGTTGCTGGCTGTGGGTCCAGGGCTGCTTCTATCCTCAGACAATTGCCCTaGATTCTGTGTCCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: RAGPITQVAGCGSRAASILRQLP*ILCPLS
Trigger: GGAGAGGGGACACAGAATCCAGGGCAATTGTCTGAG...GATAGAAGCAGCCCTGGACCCACAGCCAGCAACCTGGGTTATTGGCCCAGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCACCCTTGGCCAAGACTTaGAGTTTGGCTTTGACTCTG +
Preference number: 4 (lower is better)
Translates to: WVLSLRTSPRTEGPTLPAPLAKT*SLALTL
Trigger: CAGAGTCAAAGCCAAACTCCAAGTCTTGGCCAAGGG...TGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTGGACGTGGAGTCTCTTaGCCCCAGGGGGCGCGGCCC +
Preference number: 4 (lower is better)
Translates to: EAHMWSLEMLKLWTVDIIGRGVS*PQGARP
Trigger: GGGCCGCGCCCCCTGGGGCCAAGAGACTCCACGTCC...AATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367836.5
ENST00000367838.5
ENST00000539777.5
CDS-3UTR CCA 90 bp ACCAAGGGCATTTCTCAGGGAGAATGTCCTTTCTGGACTGTAAGGAAGGTCAAGGCCCTGAGCGGGACGTaGAGTCTCTTGGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: TKGISQGECPFWTVRKVKALSGT*SLLAPG
Trigger: CCCTGGGGCCAAGAGACTCCACGTCCCGCTCAGGGC...CTTGACCTTCCTTACAGTCCAGAAAGGACATTCTCCCTGAGAAATGCCCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539777.5
CDS-3UTR CCA 90 bp GAACCCAAGAGCCACAGCCAGGCAGTCACTCTGTCACTACAGGACAGAGCTGTCACAATGAGTTTAGCCTaGCTCCATCCGGACCGCCCT +
Preference number: 4 (lower is better)
Translates to: EPKSHSQAVTLSLQDRAVTMSLA*LHPDRP
Trigger: AGGGCGGTCCGGATGGAGCCAGGCTAAACTCATTGT...GACAGCTCTGTCCTGTAGTGACAGAGTGACTGCCTGGCTGTGGCTCTTGGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539777.5
CDS-3UTR TCA 90 bp GGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCCCACACACATCCATTTaGACTCGTCAAACTCCACGG +
Preference number: 4 (lower is better)
Translates to: GPVLELRVPHCPHQPCRGPHTSI*TRQTPR
Trigger: CCGTGGAGTTTGACGAGTTCAAATGGATGTGTGTGG...GCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AGAGCTGGGCCAATAACCCAGGTTGCTGGCTGTGGGTCCAGGGCTGCTTCTATCCCACACACATCCATTTaGACTCGTCAAACTCCACGG +
Preference number: 4 (lower is better)
Translates to: RAGPITQVAGCGSRAASIPHTSI*TRQTPR
Trigger: CCGTGGAGTTTGACGAGTTCAAATGGATGTGTGTGG...GATAGAAGCAGCCCTGGACCCACAGCCAGCAACCTGGGTTATTGGCCCAGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTGGGCCTCAGAGGCGATaGCAACCATGTAGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: GPKRSSHVVSGNAEAVDCGPQRR*QPCRGP
Trigger: GGGGCCCCTACATGGTTGTCATCGCCTCTGAGGCCC...ACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp ATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCCCATGCCTCCTGTTGGAAATGCTaGAGAGCCTGGAAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: MMHVGVSFQALRLWSSHASCWKC*RAWKSS
Trigger: AGAGGACTTCCAGGCTCTTCAGCATTTCCAACAGGA...GGCATGGGAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGTCCTGGGAGCAGCTaGAGCCAGTGTCCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: GPKRSSHVVSGNAEAVDCSPGSS*SQCPPC
Trigger: GCACGGGGGACACTGGCTTCAGCTGCTCCCAGGACT...ACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CCTGGTATCTGTGGCATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAAAGTCCTGGGAGCAGCTaGAGCCAGTGTCCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: PGICGIAQGPNKAEISMKSPGSS*SQCPPC
Trigger: GCACGGGGGACACTGGCTTCAGCTGCTCCCAGGACT...TTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTATGCCACAGATACCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TCCCTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCACTTCAGCTTTCACATaGAGAATCGAGTTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: SLLAPAGGATEDRSEALCTSAFT*RIEFLA
Trigger: TGCCAAGAACTCGATTCTTCATGTGAAAGCTGAAGT...GCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TGCTCCTTCCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCCCTCCCCAAATAAGTTaGTTTTGGCTTCGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: CSFPVCGQLYTVTCSQGRPPQIS*FWLRPQ
Trigger: TTGAGGCCGAAGCCAAAATCAACTTATTTGGGGAGG...GCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGGAAGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GATGGGGTCATGCATGTAAGCAGGCTAGCCAGGTGGTCCTTGGTCACCAAGGCCACTCCCAGCACACTGTaGAGAGGAGGAAATGATGCA +
Preference number: 4 (lower is better)
Translates to: DGVMHVSRLARWSLVTKATPSTL*RGGNDA
Trigger: TGCATCATTTCCTCCTCTTCACAGTGTGCTGGGAGT...GGCCTTGGTGACCAAGGACCACCTGGCTAGCCTGCTTACATGCATGACCCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATAAGCAGGTGGCGCCACTaGGGACCGCTCCGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCISRWRH*GPLRSA
Trigger: AGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCT...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGGACAAGATGTCCAAATaGCATGTGCACACAAAGACA +
Preference number: 4 (lower is better)
Translates to: CVWPAVHSDMLPRPRHRRDKMSK*HVHTKT
Trigger: TGTCTTTGTGTGCACATGTCATTTGGACATCTTGTC...CCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACGAGGACCTAGAAAGGTaGCAAGATGTCCAAATGACA +
Preference number: 4 (lower is better)
Translates to: QLYTVTCSQGRGTGGDGNEDLER*QDVQMT
Trigger: TGTCATTTGGACATCTTGTCACCTTTCTAGGTCCTC...GTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CGTTTCAAAGCCAAGCTGCTGCACTCAAGAATGCCTACACCTAACCAGCAACCCCCCCTTCTGAGATGGTaGCCCTGCCCCTCATGCATC +
Preference number: 4 (lower is better)
Translates to: RFKAKLLHSRMPTPNQQPPLLRW*PCPSCI
Trigger: GATGCATGAGGGGCAGGGTCACCATCTCAGAAGGGG...GGGTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAACG
56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TTCCTGGCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACCCCCTTCTGAGATGGTaGCCCTGCCCCTCATGCATC +
Preference number: 4 (lower is better)
Translates to: FLAVLGTTVPFSPVKQWYPLLRW*PCPSCI
Trigger: GATGCATGAGGGGCAGGGTCACCATCTCAGAAGGGG...GTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGCCAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GAACCCAAGAGCCACAGCCAGGCAGTCACTCTGTCACTACAGGACAGAGCTGTCAGGCGGAAATCTCAATaGAAGAGGCAGAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: EPKSHSQAVTLSLQDRAVRRKSQ*KRQRWA
Trigger: TGCCCACCTCTGCCTCTTTCATTGAGATTTCCGCCT...GACAGCTCTGTCCTGTAGTGACAGAGTGACTGCCTGGCTGTGGCTCTTGGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGGCTGTATTTGTGCTATaGTTTGGAACGTTACACCAG +
Preference number: 4 (lower is better)
Translates to: PCVWPAVHSDMLPRPRHRAVFVL*FGTLHQ
Trigger: CTGGTGTAACGTTCCAAATCATAGCACAAATACAGC...CCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CGCGTGTCATTAGGAAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGGGCAGGAGAATTGCTTaGACCCAGGAGCCGAGATCG +
Preference number: 4 (lower is better)
Translates to: RVSLGRSAVSSFTVHWGGGRRIA*TQEPRS
Trigger: CGATCTCGGCTCCTGGGTTCAAGCAATTCTCCTGCC...CCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTTCCTAATGACACGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367838.5
CDS-3UTR TCA 90 bp AATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGTCCCTCCCGCAGATCTaGGGGGCAGAGCCGCCCATC +
Preference number: 4 (lower is better)
Translates to: NAEAVDCRHYFQSLSWWLSLPQI*GAEPPI
Trigger: GATGGGCGGCTCTGCCCCTCAGATCTGCGGGAGGGA...CAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367836.5
CDS-3UTR GCA 90 bp CGTTTCAAAGCCAAGCTGCTGCACTCAAGAATGCCTACACCTAACCAGCAACCCCATCCATCTGCCTTCTaGCAGGCTCTGTCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: RFKAKLLHSRMPTPNQQPHPSAF*QALSRA
Trigger: AGCCCGGGACAGAGCCTGGCAGAAGGCAGATGGATG...GGGTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGGCACGAGCATCCATCTaGCTTCTGCCAGGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: KKCCVILHSTLGRVLLLRARASI*LLPGSV
Trigger: GACAGAGCCTGGCAGAAGGCAGATGGATGCTCGTGC...CCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGCATCTGGCACAGGGGGTGGGCAGAGCATaGTGGACGACTTTCATTCAT +
Preference number: 4 (lower is better)
Translates to: VILHSTLGRVLLLRHLAQGVGRA*WTTFIH
Trigger: ATGAATGAAAGTCGTCCAGCATGCTCTGCCCACCCC...CTGTGCCAGATGCCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271357.9
CDS-3UTR GCA 90 bp GAACCCAAGAGCCACAGCCAGGCAGTCACTCTGTCACTACAGGACAGAGCTGTCGGCTTTGGCCAAGCTTaGTGCGTAACTGTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: EPKSHSQAVTLSLQDRAVGFGQA*CVTVQG
Trigger: TCCTTGGACAGTTACGCAGCAAGCTTGGCCAAAGCC...GACAGCTCTGTCCTGTAGTGACAGAGTGACTGCCTGGCTGTGGCTCTTGGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTCACAAGAGTTCTGCTaGCTCGGCGGCCCCCGAAGC +
Preference number: 4 (lower is better)
Translates to: LGPKRSSHVVSGNAEAVDSQEFC*LGGPRS
Trigger: GCTTCGGGGGCCGCCGAGGCAGCAGAACTCTTGTGA...GTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CATCACTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGGGCTCACAAGAGTTCTaGTGCCTCGGCGGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: HHWDLKEAHMWSLEMLKLGSQEF*CLGGPR
Trigger: TCGGGGGCCGCCGAGGCAGCAGAACTCTTGTGAGCC...CAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAGTGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCCCTTCTTCGATGCTCTaGAACTGCAGCCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: RINHVEAPGRSRVIRKKCPSSML*NCSLWL
Trigger: GAGCCAGAGGCTGCAGTTGCAGAGCATCGAAGAAGG...GCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCCCATGCCCATCTCCTTCTTCGATaGTCTGCAACTGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: MMHVGVSFQALRLWSSHAHLLLR*SATAAS
Trigger: AGAGGCTGCAGTTGCAGAGCATCGAAGAAGGAGATG...GGCATGGGAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCATCAATGGCTGCATACCAGATaGTGCTCCTTCCCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: CFLCGPVLELRVPHCPHQWLHTR*CSFPVC
Trigger: ACACACAGGGAAGGAGCAGCATCTGGTATGCAGCCA...TTGATGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCCTGAGGGTCCCACACTaGCCGCATCAACCATGTAGA +
Preference number: 4 (lower is better)
Translates to: RINHVEAPGRSRVIRKKCLRVPH*PHQPCR
Trigger: TCTACATGGTTGATGCGGGCAGTGTGGGACCCTCAG...GCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCTGTCGCTCTGCTCCTGGGTaGTTTCTCTGCGGACCAGTC +
Preference number: 4 (lower is better)
Translates to: INHVEAPGRSRVIRKKCCRSAPG*FLCGPV
Trigger: GACTGGTCCGCAGAGAAAGCACCCAGGAGCAGAGCG...ACAGCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCTGTGGGTCCAGGGCTaGTTCTATCTTATTTATACC +
Preference number: 4 (lower is better)
Translates to: RVPHCPHQPCRGTRTVACLWVQG*FYLIYT
Trigger: GGTATAAATAAGATAGAAGCAGCCCTGGACCCACAG...ACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TTCCTGGCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACGCCAATAACCCAGGTTaGTGGCTGTGGGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: FLAVLGTTVPFSPVKQWYANNPG*WLWVQG
Trigger: GCCCTGGACCCACAGCCAGCAACCTGGGTTATTGGC...GTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGCCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCAGTCGGTCCGTGGGTCTaGTTTTGTGTTTTACCTATC +
Preference number: 4 (lower is better)
Translates to: WVLSLRTSPRTEGPTLPAVGPWV*FCVLPI
Trigger: GATAGGTAAAACACAAAAGCAGACCCACGGACCGAC...TGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCTGTGGTGAACCTGCCCTCTaGTCCTTCCCACTCCCATCC +
Preference number: 4 (lower is better)
Translates to: INHVEAPGRSRVIRKKCCGEPAL*SFPLPS
Trigger: GGATGGGAGTGGGAAGGAGCAGAGGGCAGGTTCACC...ACAGCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCATGCTGCACTCAAGAATaGCTACACCTAACCAGCAAC +
Preference number: 4 (lower is better)
Translates to: WVLSLRTSPRTEGPTLPACCTQE*LHLTSN
Trigger: GTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCA...TGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTGTTTCAAAGCCAAGCTaGTGCACTCAAGAATGCCTA +
Preference number: 4 (lower is better)
Translates to: RVPHCPHQPCRGTRTVACVSKPS*CTQECL
Trigger: TAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAAC...ACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCGGTATCCACAGGTCCTaGTCCCTAAATCAGAGTGCA +
Preference number: 4 (lower is better)
Translates to: GPVLELRVPHCPHQPCRGGIHRS*SLNQSA
Trigger: TGCACTCTGATTTAGGGAGCAGGACCTGTGGATACC...GCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCCCATGCCGTTGAGCTGTGTGTGTaGTCTGTAATGTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: MMHVGVSFQALRLWSSHAVELCV*SVMWDS
Trigger: GGAGTCCCACATTACAGAGCACACACACAGCTCAAC...GGCATGGGAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CGTTTCAAAGCCAAGCTGCTGCACTCAAGAATGCCTACACCTAACCAGCAACCCGTAGCATCCCTGCCCTaGCTCTTAGGGGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: RFKAKLLHSRMPTPNQQPVASLP*LLGAWR
Trigger: CCTCCAAGCCCCTAAGAGGCAGGGCAGGGATGCTAC...GGGTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CCTGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGTCCTGGTATCGCCTTTaGTGCTCACCTTTCATTCAT +
Preference number: 4 (lower is better)
Translates to: PGCFLCGPVLELRVPHCPSWYRL*CSPFIH
Trigger: ATGAATGAAAGGTGAGCAGCAAAGGCGATACCAGGA...CGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537209.5
CDS-3UTR CCA 90 bp CGCGTGTCATTAGGAAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGGGGCTTTGCACTGGTTaGCCGAGTAGACCACACCCT +
Preference number: 4 (lower is better)
Translates to: RVSLGRSAVSSFTVHWGGGLCTG*PSRPHP
Trigger: AGGGTGTGGTCTACTCGGCCAACCAGTGCAAAGCCC...CCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTTCCTAATGACACGCG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CGCGTGTCATTAGGAAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGCAAAGGACAGCCATGTaGCCCAAGTCTCCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: RVSLGRSAVSSFTVHWGGQRTAM*PKSPGS
Trigger: CGAGCCTGGAGACTTGGGCCACATGGCTGTCCTTTG...CCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTTCCTAATGACACGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCCTCCTTCCCTGTGTGTaGCCAGCTGTACACAGTGAC +
Preference number: 4 (lower is better)
Translates to: RINHVEAPGRSRVIRKKCLLPCV*PAVHSD
Trigger: GTCACTGTGTACAGCTGGCCACACACAGGGAAGGAG...GCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGAAAGAAGCTCACATGTaGTCTCTGGAAATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: CVWPAVHSDMLPRPRHRRKEAHM*SLEMLK
Trigger: CTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTT...CCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CGTTTCAAAGCCAAGCTGCTGCACTCAAGAATGCCTACACCTAACCAGCAACCCGAAGCGCTCTGCTCCTaGGTGCTTTCTCTGCGGACC +
Preference number: 4 (lower is better)
Translates to: RFKAKLLHSRMPTPNQQPEALCS*VLSLRT
Trigger: GGTCCGCAGAGAAAGCACCCAGGAGCAGAGCGCTTC...GGGTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCGCAAGAGGAGATCAGTaGCTTCCCAAGTCATCACAG +
Preference number: 4 (lower is better)
Translates to: GPVLELRVPHCPHQPCRGARGDQ*LPKSSQ
Trigger: CTGTGATGACTTGGGAAGCCACTGATCTCCTCTTGC...GCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACGTCTTAGGGTCAGTGGGGGAGTaGGGGGCTGTCTCAGGATTC +
Preference number: 4 (lower is better)
Translates to: AVLGTTVPFSPVKQWYVLGSVGE*GAVSGF
Trigger: GAATCCTGAGACAGCCCCCCACTCCCCCACTGACCC...TAAGACGTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AGAGCTGGGCCAATAACCCAGGTTGCTGGCTGTGGGTCCAGGGCTGCTTCTATCGTGTGCTCTGTAATGTaGGACTCCCAATGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: RAGPITQVAGCGSRAASIVCSVM*DSQCLL
Trigger: CAGAAGGCATTGGGAGTCCCACATTACAGAGCACAC...GATAGAAGCAGCCCTGGACCCACAGCCAGCAACCTGGGTTATTGGCCCAGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GGAGGAAATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCCCTGAACTTCAGTCTTaGTGCCTCTGGCCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: GGNDACGGLLPSPSSLVLPELQS*CLWPGK
Trigger: TTTCCCTGGCCAGAGGCACCAAGACTGAAGTTCAGG...GAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCATTTCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGCATCTGGCACAGCCTGAACTTCAGTCTTaGTGCCTCTGGCCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: VILHSTLGRVLLLRHLAQPELQS*CLWPGK
Trigger: TTTCCCTGGCCAGAGGCACCAAGACTGAAGTTCAGG...CTGTGCCAGATGCCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp ATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCTGTAGCAGGCTAGCCAGGTaGTCCTTGGTCACCAAGGCC +
Preference number: 4 (lower is better)
Translates to: INHVEAPGRSRVIRKKCCSRLAR*SLVTKA
Trigger: GGCCTTGGTGACCAAGGACCACCTGGCTAGCCTGCT...ACAGCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CCTGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGAACATTGGCACTAGATaGCCCTTGTCTTACACTCCT +
Preference number: 4 (lower is better)
Translates to: PGCFLCGPVLELRVPHCPNIGTR*PLSYTP
Trigger: AGGAGTGTAAGACAAGGGCCATCTAGTGCCAATGTT...CGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCATCAAGTGAAGAAACACCAGTaGCTCAGCTTCAGCTGCACC +
Preference number: 4 (lower is better)
Translates to: CFLCGPVLELRVPHCPHQVKKHQ*LSFSCT
Trigger: GGTGCAGCTGAAGCTGAGCCACTGGTGTTTCTTCAC...TTGATGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TCCCTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCATTTGTGCTATGATTTaGAACGTTACACCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: SLLAPAGGATEDRSEALCICAMI*NVTPGP
Trigger: AGGGCCTGGTGTAACGTTCCAAATCATAGCACAAAT...GCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCTGCCTCTTAGGGGCTTaGAGGATTAGGGATTCTGTG +
Preference number: 4 (lower is better)
Translates to: GPVLELRVPHCPHQPCRGCLLGA*RIRDSV
Trigger: CACAGAATCCCTAATCCTCCAAGCCCCTAAGAGGCA...GCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGCTCAGACAATTGCCCTaGATTCTGTGTCCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: ARINHVEAPGRSRVIRKKLRQLP*ILCPLS
Trigger: GGAGAGGGGACACAGAATCCAGGGCAATTGTCTGAG...CTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GGCCGTGGACTACACGATAAGGGCAAAGGAATTCAAAACAAGAGTGCCCAGCCACCCAGTTCCAGCCGCTaGGACGTCGCCTTTTCCATG +
Preference number: 4 (lower is better)
Translates to: GRGLHDKGKGIQNKSAQPPSSSR*DVAFSM
Trigger: CATGGAAAAGGCGACGTCCCAGCGGCTGGAACTGGG...TGGCTGGGCACTCTTGTTTTGAATTCCTTTGCCCTTATCGTGTAGTCCACGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537209.5
CDS-3UTR CCA 90 bp AAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGGTGGGCAGAGCATGCTaGACGACTGTAATCCCGGCT +
Preference number: 4 (lower is better)
Translates to: KKCCVILHSTLGRVLLLRVGRAC*TTVIPA
Trigger: AGCCGGGATTACAGTCGTCCAGCATGCTCTGCCCAC...CCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367838.5
CDS-3UTR CCA 90 bp AATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGGCCCTGAGCGGGACGTaGAGTCTCTTGGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: NAEAVDCRHYFQSLSWWLALSGT*SLLAPG
Trigger: CCCTGGGGCCAAGAGACTCCACGTCCCGCTCAGGGC...CAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367836.5
ENST00000367838.5
ENST00000539777.5
CDS-3UTR TCA 90 bp AGATTGTGCTCTAATGGACAGGGCAGACAAAGCCACAGAACCTTGATCTGCCTGAGCGGTCGATGGCAATaGCCCCGAGGGTTAGCATGC +
Preference number: 4 (lower is better)
Translates to: RLCSNGQGRQSHRTLICLSGRWQ*PRGLAC
Trigger: GCATGCTAACCCTCGGGGTCATTGCCATCGACCGCT...CAGGCAGATCAAGGTTCTGTGGCTTTGTCTGCCCTGTCCATTAGAGCACAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271357.9
ENST00000537209.5
CDS-3UTR TCA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATAGCACCTTGCGTGCCTTaGCCCTGGCCACGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCIAPCVP*PWPRGR
Trigger: TCTTCCGCGTGGCCAGGGTCAAGGCACGCAAGGTGC...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATAAGTCCTGGGAGCAGCTaGAGCCAGTGTCCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCISPGSS*SQCPPC
Trigger: GCACGGGGGACACTGGCTTCAGCTGCTCCCAGGACT...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AAGGGTAATTCACTTTCTAGAACAGCTGCCTCTCAGCAACCAGCAAGATCTCCTAGTCCTGGGAGCAGCTaGAGCCAGTGTCCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: KGNSLSRTAASQQPARSPSPGSS*SQCPPC
Trigger: GCACGGGGGACACTGGCTTCAGCTGCTCCCAGGACT...AGGAGATCTTGCTGGTTGCTGAGAGGCAGCTGTTCTAGAAAGTGAATTACCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGAGTCCTGGGAGCAGCTaGAGCCAGTGTCCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: NAEAVDCRHYFQSLSWWLSPGSS*SQCPPC
Trigger: GCACGGGGGACACTGGCTTCAGCTGCTCCCAGGACT...CAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TTCCTGGCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACGGTGGGCAAGTGCAGTaGGAGGGAGGGTTGTCATCA +
Preference number: 4 (lower is better)
Translates to: FLAVLGTTVPFSPVKQWYGGQVQ*EGGLSS
Trigger: TGATGACAACCCTCCCTCTCACTGCACTTGCCCACC...GTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGCCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATAGCCCCACGGCACCCTaGGGCCCTCATCTCTGCTCG +
Preference number: 4 (lower is better)
Translates to: RSSHVVSGNAEAVDCRHYSPTAP*GPHLCS
Trigger: CGAGCAGAGATGAGGGCCTCAGGGTGCCGTGGGGCT...ATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCGTGGTTTCTCCCTTTTaGAATACCAAAGAACTTGTC +
Preference number: 4 (lower is better)
Translates to: LLAPAGGATEDRSEALCSVVSPF*NTKELV
Trigger: GACAAGTTCTTTGGTATTTCAAAAGGGAGAAACCAC...GGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGACAAGATGTCCAAATaGCATGTGCACACAAAGACA +
Preference number: 4 (lower is better)
Translates to: CGQLYTVTCSQGRGTGGDDKMSK*HVHTKT
Trigger: TGTCTTTGTGTGCACATGTCATTTGGACATCTTGTC...ATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTGACAAGATGTCCAAATaGCATGTGCACACAAAGACA +
Preference number: 4 (lower is better)
Translates to: RVPHCPHQPCRGTRTVACDKMSK*HVHTKT
Trigger: TGTCTTTGTGTGCACATGTCATTTGGACATCTTGTC...ACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp ATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCCCATGCCCACTTCACATGTGCATaGGCAACCACACTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: MMHVGVSFQALRLWSSHAHFTCA*ATTLQS
Trigger: ACTTTGGAGTGTGGTTGCTCATGCACATGTGAAGTG...GGCATGGGAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CGCGTGTCATTAGGAAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGCGCCTGGCATCCAGGTaGCCCAGAATAGTTGAGTTC +
Preference number: 4 (lower is better)
Translates to: RVSLGRSAVSSFTVHWGGRLASR*PRIVEF
Trigger: GAACTCAACTATTCTGGGTCACCTGGATGCCAGGCG...CCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTTCCTAATGACACGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCAGGCGGAAATCTCAATaGAAGAGGCAGAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: RINHVEAPGRSRVIRKKCRRKSQ*KRQRWA
Trigger: TGCCCACCTCTGCCTCTTTCATTGAGATTTCCGCCT...GCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CCTGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCTTGGAGTTTGGCTTTaGCTCTGGCTTAACTTACTT +
Preference number: 4 (lower is better)
Translates to: PGCFLCGPVLELRVPHCPLGVWL*LWLNLL
Trigger: AAGTAAGTTAAGCCAGAGTCAAAGCCAAACTCCAAG...CGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTGGACTGACTCACCTGTaGTTTGTGGTATTTCAAACT +
Preference number: 4 (lower is better)
Translates to: RVPHCPHQPCRGTRTVACGLTHL*FVVFQT
Trigger: AGTTTGAAATACCACAAATCACAGGTGAGTCAGTCC...ACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCTTCCTCTGGGAGGACTaGCTCACCTGTGATTTGTGG +
Preference number: 4 (lower is better)
Translates to: RINHVEAPGRSRVIRKKCFLWED*LTCDLW
Trigger: CCACAAATCACAGGTGAGTCAGTCCTCCCAGAGGAA...GCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CGTTTCAAAGCCAAGCTGCTGCACTCAAGAATGCCTACACCTAACCAGCAACCCAACAGGTCTTCACACTaGTGCCCTGCACTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: RFKAKLLHSRMPTPNQQPNRSSH*CPALPR
Trigger: CCGAGGGAGTGCAGGGCAGCAGTGTGAAGACCTGTT...GGGTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACCATCCATCTGCCTTCTaGCAGGCTCTGTCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: LGPKRSSHVVSGNAEAVDHPSAF*QALSRA
Trigger: AGCCCGGGACAGAGCCTGGCAGAAGGCAGATGGATG...GTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000537209.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CATCACTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGACAGTGCACCTTGCGTaGCTTGACCCTGGCCACGCG +
Preference number: 4 (lower is better)
Translates to: HHWDLKEAHMWSLEMLKLTVHLA*LDPGHA
Trigger: CGCGTGGCCAGGGTCAAGGCACGCAAGGTGCACTGT...CAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAGTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATACAGTGCACCTTGCGTaGCTTGACCCTGGCCACGCG +
Preference number: 4 (lower is better)
Translates to: AEAVDCRHYFQSLSWWLHTVHLA*LDPGHA
Trigger: CGCGTGGCCAGGGTCAAGGCACGCAAGGTGCACTGT...ATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCTGTAAGAGGAGGTGGAGGTaGTGGAGTTCTTCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: INHVEAPGRSRVIRKKCCKRRWR*WSSSSR
Trigger: CCGGGAGGAAGAACTCCAGCACCTCCACCTCCTCTT...ACAGCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGGGTCCCCAAAGCACATaGCCAGTAGTTCTTTGCGAA +
Preference number: 4 (lower is better)
Translates to: ARINHVEAPGRSRVIRKKGPQST*PVVLCE
Trigger: TTCGCAAAGAACTACTGGGCATGTGCTTTGGGGACC...CTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ACCAAGGGCATTTCTCAGGGAGAATGTCCTTTCTGGACTGTAAGGAAGGTCAAGCAGGGGCTGTCCACCTaGCATGAGCGCAGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: TKGISQGECPFWTVRKVKQGLST*HERSEV
Trigger: CACCTCACTGCGCTCATGGCAGGTGGACAGCCCCTG...CTTGACCTTCCTTACAGTCCAGAAAGGACATTCTCCCTGAGAAATGCCCTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCCCATGCCTTTGGCCAAGCTTGCTaGGTAACTGTCCAAGGACTT +
Preference number: 4 (lower is better)
Translates to: MMHVGVSFQALRLWSSHAFGQAC*VTVQGL
Trigger: AAGTCCTTGGACAGTTACGCAGCAAGCTTGGCCAAA...GGCATGGGAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCGGCTTTGGCCAAGCTTaGTGCGTAACTGTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: RINHVEAPGRSRVIRKKCGFGQA*CVTVQG
Trigger: TCCTTGGACAGTTACGCAGCAAGCTTGGCCAAAGCC...GCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CATCACTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGCCCCGGGACAGTCCGTaGTGTAACCAAGACCCCTGG +
Preference number: 4 (lower is better)
Translates to: HHWDLKEAHMWSLEMLKLPRDSP*CNQDPW
Trigger: CCAGGGGTCTTGGTTACAGCACGGACTGTCCCGGGG...CAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAGTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CCTGGTATCTGTGGCATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAATCACAAGAGTTCTGCTaGCTCGGCGGCCCCCGAAGC +
Preference number: 4 (lower is better)
Translates to: PGICGIAQGPNKAEISMKSQEFC*LGGPRS
Trigger: GCTTCGGGGGCCGCCGAGGCAGCAGAACTCTTGTGA...TTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTATGCCACAGATACCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGCATCTCCTTCTTCGATaGTCTGCAACTGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: ARINHVEAPGRSRVIRKKHLLLR*SATAAS
Trigger: AGAGGCTGCAGTTGCAGAGCATCGAAGAAGGAGATG...CTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACAGGCATCTGGCACAGTaGACGGCTGGACTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LGPKRSSHVVSGNAEAVDRHLAQ*TAGLPA
Trigger: TGCTGGGAGTCCAGCCGTGCACTGTGCCAGATGCCT...GTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGTCATTAGGAAGAAGTaGTGTGTCATCCTTCACAGT +
Preference number: 4 (lower is better)
Translates to: CGQLYTVTCSQGRGTGGDVIRKK*CVILHS
Trigger: ACTGTGAAGGATGACACAGCACTTCTTCCTAATGAC...ATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AGAGCTGGGCCAATAACCCAGGTTGCTGGCTGTGGGTCCAGGGCTGCTTCTATCTCTATTTCCTGGCTGTaGTTGGCACTACAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: RAGPITQVAGCGSRAASISISWL*LALQSH
Trigger: ATGGGACTGTAGTGCCAAGCACAGCCAGGAAATAGA...GATAGAAGCAGCCCTGGACCCACAGCCAGCAACCTGGGTTATTGGCCCAGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GATGGGGTCATGCATGTAAGCAGGCTAGCCAGGTGGTCCTTGGTCACCAAGGCCCACAGAACCTTGATCTaGCTGCACTTCACATGTGCA +
Preference number: 4 (lower is better)
Translates to: DGVMHVSRLARWSLVTKAHRTLI*LHFTCA
Trigger: TGCACATGTGAAGTGCAGGCAGATCAAGGTTCTGTG...GGCCTTGGTGACCAAGGACCACCTGGCTAGCCTGCTTACATGCATGACCCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CCTGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGATTCTATCCAGATTGTaGTCTAATGGACAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: PGCFLCGPVLELRVPHCPILSRL*SNGQGR
Trigger: TCTGCCCTGTCCATTAGAGCACAATCTGGATAGAAT...CGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGCATCTGGCACAGGGGGTTTCGACCTTCTaGACTAACGGCAGATATCCT +
Preference number: 4 (lower is better)
Translates to: VILHSTLGRVLLLRHLAQGVSTF*TNGRYP
Trigger: AGGATATCTGCCGTTAGTGCAGAAGGTCGAAACCCC...CTGTGCCAGATGCCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCGAACTTCAGTCTTGGTaGCTCTGGCCAGGGAAATGG +
Preference number: 4 (lower is better)
Translates to: RINHVEAPGRSRVIRKKCELQSW*LWPGKW
Trigger: CCATTTCCCTGGCCAGAGGCACCAAGACTGAAGTTC...GCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TTCCTGGCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACTGGCTCAGCTTCAGCTaGACCCCAGGCATTGTGCTG +
Preference number: 4 (lower is better)
Translates to: FLAVLGTTVPFSPVKQWYWLSFS*TPGIVL
Trigger: CAGCACAATGCCTGGGGTGCAGCTGAAGCTGAGCCA...GTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGCCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TCCCTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTACTACCCAGGAAAATaGTTGCTGAGAGAAATGAAC +
Preference number: 4 (lower is better)
Translates to: SLLAPAGGATEDRSEALCYYPGK*LLREMN
Trigger: GTTCATTTCTCTCAGCAAGCATTTTCCTGGGTAGTA...GCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGGCCAGCCCCGGGGAGTaGGGAGTGGACGTAAACAGG +
Preference number: 4 (lower is better)
Translates to: NAEAVDCRHYFQSLSWWLASPGE*GVDVNR
Trigger: CCTGTTTACGTCCACTCCCCACTCCCCGGGGCTGGC...CAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000537209.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GGAGGAAATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCGTGGGCAGAGCATGCTaGACGACTTTCATTCATCCA +
Preference number: 4 (lower is better)
Translates to: GGNDACGGLLPSPSSLVLVGRAC*TTFIHP
Trigger: TGGATGAATGAAAGTCGTCCAGCATGCTCTGCCCAC...GAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCATTTCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271357.9
CDS-3UTR CCA 90 bp GGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCTGCTTTAGATGCTTCTaGTCCCATCACTGGGACCTA +
Preference number: 4 (lower is better)
Translates to: GPVLELRVPHCPHQPCRGCFRCF*SHHWDL
Trigger: TAGGTCCCAGTGATGGGACCAGAAGCATCTAAAGCA...GCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACGAAGCGCTCTGCTCCTaGGTGCTTTCTCTGCGGACC +
Preference number: 4 (lower is better)
Translates to: LGPKRSSHVVSGNAEAVDEALCS*VLSLRT
Trigger: GGTCCGCAGAGAAAGCACCCAGGAGCAGAGCGCTTC...GTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GAACCCAAGAGCCACAGCCAGGCAGTCACTCTGTCACTACAGGACAGAGCTGTCGCAAGAGGAGATCAGTaGCTTCCCAAGTCATCACAG +
Preference number: 4 (lower is better)
Translates to: EPKSHSQAVTLSLQDRAVARGDQ*LPKSSQ
Trigger: CTGTGATGACTTGGGAAGCCACTGATCTCCTCTTGC...GACAGCTCTGTCCTGTAGTGACAGAGTGACTGCCTGGCTGTGGCTCTTGGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGCATCTGGCACAGGTGTGCTCTGTAATGTaGGACTCCCAATGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: VILHSTLGRVLLLRHLAQVCSVM*DSQCLL
Trigger: CAGAAGGCATTGGGAGTCCCACATTACAGAGCACAC...CTGTGCCAGATGCCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TCCCTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCGGCATATTGTCGGGATaGAAAATATTCAGGGAAATC +
Preference number: 4 (lower is better)
Translates to: SLLAPAGGATEDRSEALCGILSG*KIFREI
Trigger: GATTTCCCTGAATATTTTCCATCCCGACAATATGCC...GCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTTGTGAATGTATCTTGTaGTCCATCCAGAGACATGTC +
Preference number: 4 (lower is better)
Translates to: RVPHCPHQPCRGTRTVACCECIL*SIQRHV
Trigger: GACATGTCTCTGGATGGACCACAAGATACATTCACA...ACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AGTCACCCTGTGACGGAGGACTCCCTCAATCCTGTGTGTCTCCACATTGAAACACATAGCACACCAGCATaGCCAGAAAGGGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: SHPVTEDSLNPVCLHIETHSTPA*PERGRG
Trigger: CCCTCTTCCCCTTTCTGGTCATGCTGGTGTGCTATG...TGTTTCAATGTGGAGACACACAGGATTGAGGGAGTCCTCCGTCACAGGGTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGCATCATATCTGTCCCTaGGTCCTGGGAGCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: KKCCVILHSTLGRVLLLRHHICP*VLGAAE
Trigger: TTCAGCTGCTCCCAGGACTCAGGGACAGATATGATG...CCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GGAGGAAATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCCCTCCCCAAATAAGTTaGTTTTGGCTTCGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: GGNDACGGLLPSPSSLVLPPQIS*FWLRPQ
Trigger: TTGAGGCCGAAGCCAAAATCAACTTATTTGGGGAGG...GAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCATTTCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCACTCCCAGCACACTGTaGAGAGGAGGAAATGATGCA +
Preference number: 4 (lower is better)
Translates to: RINHVEAPGRSRVIRKKCTPSTL*RGGNDA
Trigger: TGCATCATTTCCTCCTCTTCACAGTGTGCTGGGAGT...GCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CCTGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGGTGGTTTCTCCCTTTTaGAATACCAAAGAACTTGTC +
Preference number: 4 (lower is better)
Translates to: PGCFLCGPVLELRVPHCPVVSPF*NTKELV
Trigger: GACAAGTTCTTTGGTATTTCAAAAGGGAGAAACCAC...CGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGTGCCATGCAGAACTaGGGCCAGCTATTTTCATTG +
Preference number: 4 (lower is better)
Translates to: ARINHVEAPGRSRVIRKKCAMQN*GQLFSL
Trigger: CAATGAAAATAGCTGGCCTCAGTTCTGCATGGCACA...CTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GATGGGGTCATGCATGTAAGCAGGCTAGCCAGGTGGTCCTTGGTCACCAAGGCCGTGACCCAGAATAGTTaGGTTCAATCACCACAGGTA +
Preference number: 4 (lower is better)
Translates to: DGVMHVSRLARWSLVTKAVTQNS*VQSPQV
Trigger: TACCTGTGGTGATTGAACTCAACTATTCTGGGTCAC...GGCCTTGGTGACCAAGGACCACCTGGCTAGCCTGCTTACATGCATGACCCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TTCCTGGCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACTGGAAGCAGAGTGTCTaGCCTGCACAGGTGAACCTG +
Preference number: 4 (lower is better)
Translates to: FLAVLGTTVPFSPVKQWYWKQSV*PAQVNL
Trigger: CAGGTTCACCTGTGCAGGTCAGACACTCTGCTTCCA...GTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGCCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp ATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCCCATGCCCAGGCCCTGGGGATTTaGTCATCTTTGATAGTCATT +
Preference number: 4 (lower is better)
Translates to: MMHVGVSFQALRLWSSHAQALGI*SSLIVI
Trigger: AATGACTATCAAAGATGATCAAATCCCCAGGGCCTG...GGCATGGGAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCACTTGGAGTTTGGCTTTaGCTCTGGCTTAACTTACTT +
Preference number: 4 (lower is better)
Translates to: WVLSLRTSPRTEGPTLPALGVWL*LWLNLL
Trigger: AAGTAAGTTAAGCCAGAGTCAAAGCCAAACTCCAAG...TGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AGTCACCCTGTGACGGAGGACTCCCTCAATCCTGTGTGTCTCCACATTGAAACACCAGATGTAGACAAGTaGCATCACAGCCCGGTTCCC +
Preference number: 4 (lower is better)
Translates to: SHPVTEDSLNPVCLHIETPDVDK*HHSPVP
Trigger: GGGAACCGGGCTGTGATGGCACTTGTCTACATCTGG...TGTTTCAATGTGGAGACACACAGGATTGAGGGAGTCCTCCGTCACAGGGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACGTCTTAACGACTGTGCCACAGTaGACCTTGCGTGCCTTGACC +
Preference number: 4 (lower is better)
Translates to: AVLGTTVPFSPVKQWYVLTTVPQ*TLRALT
Trigger: GGTCAAGGCACGCAAGGTGCACTGTGGCACAGTCGT...TAAGACGTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AGATTGTGCTCTAATGGACAGGGCAGACAAAGCCACAGAACCTTGATCTGCCTGAAGAGGAGGTGGAGGTaGTGGAGTTCTTCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: RLCSNGQGRQSHRTLICLKRRWR*WSSSSR
Trigger: CCGGGAGGAAGAACTCCAGCACCTCCACCTCCTCTT...CAGGCAGATCAAGGTTCTGTGGCTTTGTCTGCCCTGTCCATTAGAGCACAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AGATTGTGCTCTAATGGACAGGGCAGACAAAGCCACAGAACCTTGATCTGCCTGAGGCATTCCTCCTGCTaGCTGAAGAGGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: RLCSNGQGRQSHRTLICLRHSSC*LKRRWR
Trigger: CCTCCACCTCCTCTTCAGGCAGCAGGAGGAATGCCT...CAGGCAGATCAAGGTTCTGTGGCTTTGTCTGCCCTGTCCATTAGAGCACAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACAGGCATTCCTCCTGCTaGCTGAAGAGGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LGPKRSSHVVSGNAEAVDRHSSC*LKRRWR
Trigger: CCTCCACCTCCTCTTCAGGCAGCAGGAGGAATGCCT...GTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCAGGGGCTGTCCACCTaGCATGAGCGCAGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: NAEAVDCRHYFQSLSWWLQGLST*HERSEV
Trigger: CACCTCACTGCGCTCATGGCAGGTGGACAGCCCCTG...CAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCATCAATTTGGCCAAGCTTGCTaGGTAACTGTCCAAGGACTT +
Preference number: 4 (lower is better)
Translates to: CFLCGPVLELRVPHCPHQFGQAC*VTVQGL
Trigger: AAGTCCTTGGACAGTTACGCAGCAAGCTTGGCCAAA...TTGATGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AGTCACCCTGTGACGGAGGACTCCCTCAATCCTGTGTGTCTCCACATTGAAACACCTTCTTCGATGCTCTaGAACTGCAGCCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SHPVTEDSLNPVCLHIETPSSML*NCSLWL
Trigger: GAGCCAGAGGCTGCAGTTGCAGAGCATCGAAGAAGG...TGTTTCAATGTGGAGACACACAGGATTGAGGGAGTCCTCCGTCACAGGGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CCCAACCCACAAGGACAGTATGGCTCTGCTCCTTCTTATAGGCATATATGGCTACGCTCTGCTCCTGGGTaGTTTCTCTGCGGACCAGTC +
Preference number: 4 (lower is better)
Translates to: PNPQGQYGSAPSYRHIWLRSAPG*FLCGPV
Trigger: GACTGGTCCGCAGAGAAAGCACCCAGGAGCAGAGCG...TAGCCATATATGCCTATAAGAAGGAGCAGAGCCATACTGTCCTTGTGGGTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATCGCTCTGCTCCTGGGTaGTTTCTCTGCGGACCAGTC +
Preference number: 4 (lower is better)
Translates to: AEAVDCRHYFQSLSWWLHRSAPG*FLCGPV
Trigger: GACTGGTCCGCAGAGAAAGCACCCAGGAGCAGAGCG...ATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GAACCCAAGAGCCACAGCCAGGCAGTCACTCTGTCACTACAGGACAGAGCTGTCAGGTCTTTTACAAACTaGAGACCAGGGGACCAGCTA +
Preference number: 4 (lower is better)
Translates to: EPKSHSQAVTLSLQDRAVRSFTN*RPGDQL
Trigger: TAGCTGGTCCCCTGGTCTGCAGTTTGTAAAAGACCT...GACAGCTCTGTCCTGTAGTGACAGAGTGACTGCCTGGCTGTGGCTCTTGGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CCTGGTATCTGTGGCATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAAGGTGAACCTGCCCTCTaGTCCTTCCCACTCCCATCC +
Preference number: 4 (lower is better)
Translates to: PGICGIAQGPNKAEISMKGEPAL*SFPLPS
Trigger: GGATGGGAGTGGGAAGGAGCAGAGGGCAGGTTCACC...TTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTATGCCACAGATACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CCTGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGAAATATGGTTCTAGCTaGCAAGCATCCTTCAAGACT +
Preference number: 4 (lower is better)
Translates to: PGCFLCGPVLELRVPHCPKYGSS*QASFKT
Trigger: AGTCTTGAAGGATGCTTGGCAGCTAGAACCATATTT...CGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACGTCTTAGGAAGGCTGCAGGCCTaGCACTGCATGGCAGTTTAC +
Preference number: 4 (lower is better)
Translates to: AVLGTTVPFSPVKQWYVLGRLQA*HCMAVY
Trigger: GTAAACTGCCATGCAGTGGCAGGCCTGCAGCCTTCC...TAAGACGTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATTCCCATCAGGAAGGCTaGAGGCCTGCCACTGCATGG +
Preference number: 4 (lower is better)
Translates to: AEAVDCRHYFQSLSWWLHSHQEG*RPATAW
Trigger: CCATGCAGTGGCAGGCCTGCAGCCTTCCTGATGGGA...ATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ACCAAGGGCATTTCTCAGGGAGAATGTCCTTTCTGGACTGTAAGGAAGGTCAAGTCCCATCAGGAAGGCTaGAGGCCTGCCACTGCATGG +
Preference number: 4 (lower is better)
Translates to: TKGISQGECPFWTVRKVKSHQEG*RPATAW
Trigger: CCATGCAGTGGCAGGCCTGCAGCCTTCCTGATGGGA...CTTGACCTTCCTTACAGTCCAGAAAGGACATTCTCCCTGAGAAATGCCCTTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CGTTTCAAAGCCAAGCTGCTGCACTCAAGAATGCCTACACCTAACCAGCAACCCGCCAAATGTCCCATGTaGCACTGTCCATGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: RFKAKLLHSRMPTPNQQPAKCPM*HCPCGP
Trigger: GGGACCACATGGACAGTGGCACATGGGACATTTGGC...GGGTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AGTCACCCTGTGACGGAGGACTCCCTCAATCCTGTGTGTCTCCACATTGAAACAGCCAAATGTCCCATGTaGCACTGTCCATGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: SHPVTEDSLNPVCLHIETAKCPM*HCPCGP
Trigger: GGGACCACATGGACAGTGGCACATGGGACATTTGGC...TGTTTCAATGTGGAGACACACAGGATTGAGGGAGTCCTCCGTCACAGGGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAAGAGGCAGAGGTGGGCGCCAAATGTCCCATGTaGCACTGTCCATGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: IAQGPNKAEISMKEAEVGAKCPM*HCPCGP
Trigger: GGGACCACATGGACAGTGGCACATGGGACATTTGGC...GCCCACCTCTGCCTCTTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TGCTCCTTCCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCAGGCATTGTGCTGCATaGTTTCCAAGTATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: CSFPVCGQLYTVTCSQGRRHCAA*FPSISS
Trigger: TGAGGAAATACTTGGAAAGCATGCAGCACAATGCCT...GCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGGAAGGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CCCAACCCACAAGGACAGTATGGCTCTGCTCCTTCTTATAGGCATATATGGCTAGGGGTGGGCAGAGCATaGTGGACGACTCCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: PNPQGQYGSAPSYRHIWLGVGRA*WTTPLA
Trigger: AGCAAGAGGAGTCGTCCAGCATGCTCTGCCCACCCC...TAGCCATATATGCCTATAAGAAGGAGCAGAGCCATACTGTCCTTGTGGGTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537209.5
CDS-3UTR CCA 90 bp CATGACTTAACCATACCCACGTCTTCACCATCCTCACTATATCACACTTGCACTGCCAGCCCCGGGGAGTaGGGAGTGGACGTAAACAGG +
Preference number: 4 (lower is better)
Translates to: HDLTIPTSSPSSLYHTCTASPGE*GVDVNR
Trigger: CCTGTTTACGTCCACTCCCCACTCCCCGGGGCTGGC...AGTGCAAGTGTGATATAGTGAGGATGGTGAAGACGTGGGTATGGTTAAGTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATCACCTCGGCGTGGGGTaGGCAGAGCATGCTGGACGA +
Preference number: 4 (lower is better)
Translates to: RSSHVVSGNAEAVDCRHYHLGVG*AEHAGR
Trigger: TCGTCCAGCATGCTCTGCCCACCCCACGCCGAGGTG...ATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367838.5
ENST00000537209.5
CDS-3UTR CCA 90 bp ACCAAGGGCATTTCTCAGGGAGAATGTCCTTTCTGGACTGTAAGGAAGGTCAAGCCAACCAAACAGGGGTaGCAGGCAGCCGATGAGCGA +
Preference number: 4 (lower is better)
Translates to: TKGISQGECPFWTVRKVKPTKQG*QAADER
Trigger: TCGCTCATCGGCTGCCTGCCACCCCTGTTTGGTTGG...CTTGACCTTCCTTACAGTCCAGAAAGGACATTCTCCCTGAGAAATGCCCTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CCCAACCCACAAGGACAGTATGGCTCTGCTCCTTCTTATAGGCATATATGGCTACCAACCAAACAGGGGTaGCAGGCAGCCGATGAGCGA +
Preference number: 4 (lower is better)
Translates to: PNPQGQYGSAPSYRHIWLPTKQG*QAADER
Trigger: TCGCTCATCGGCTGCCTGCCACCCCTGTTTGGTTGG...TAGCCATATATGCCTATAAGAAGGAGCAGAGCCATACTGTCCTTGTGGGTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACCAAAGGACAGCCATGTaGCCCAAGTCTCCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: LGPKRSSHVVSGNAEAVDQRTAM*PKSPGS
Trigger: CGAGCCTGGAGACTTGGGCCACATGGCTGTCCTTTG...GTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TGCTCCTTCCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCAAAGAAGCTCACATGTaGTCTCTGGAAATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: CSFPVCGQLYTVTCSQGRKEAHM*SLEMLK
Trigger: CTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTT...GCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGGAAGGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AGATTGTGCTCTAATGGACAGGGCAGACAAAGCCACAGAACCTTGATCTGCCTGCCAGGTTGCTGGCTGTaGGTCCAGGGCTGCTTCTAT +
Preference number: 4 (lower is better)
Translates to: RLCSNGQGRQSHRTLICLPGCWL*VQGCFY
Trigger: ATAGAAGCAGCCCTGGACCCACAGCCAGCAACCTGG...CAGGCAGATCAAGGTTCTGTGGCTTTGTCTGCCCTGTCCATTAGAGCACAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACGTCTTACCAGGTTGCTGGCTGTaGGTCCAGGGCTGCTTCTAT +
Preference number: 4 (lower is better)
Translates to: AVLGTTVPFSPVKQWYVLPGCWL*VQGCFY
Trigger: ATAGAAGCAGCCCTGGACCCACAGCCAGCAACCTGG...TAAGACGTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACAATAACCCAGGTTGCTaGCTGTGGGTCCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LGPKRSSHVVSGNAEAVDNNPGC*LWVQGC
Trigger: GCAGCCCTGGACCCACAGCCAGCAACCTGGGTTATT...GTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp ATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCCCATGCCATGCATCTTGGTGGCTaGCATTCTATCCAGATTGTG +
Preference number: 4 (lower is better)
Translates to: MMHVGVSFQALRLWSSHAMHLGG*HSIQIV
Trigger: CACAATCTGGATAGAATGCCAGCCACCAAGATGCAT...GGCATGGGAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGTTTAGTGGGGGCACTTaGGGTTTCGACCTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: KKCCVILHSTLGRVLLLRFSGGT*GFDLLH
Trigger: GTGCAGAAGGTCGAAACCCCAAGTGCCCCCACTAAA...CCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATAGCAGGCTAGCCAGGTaGTCCTTGGTCACCAAGGCC +
Preference number: 4 (lower is better)
Translates to: AEAVDCRHYFQSLSWWLHSRLAR*SLVTKA
Trigger: GGCCTTGGTGACCAAGGACCACCTGGCTAGCCTGCT...ATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp ATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCCCATGCCAACATTGGCACTAGATaGCCCTTGTCTTACACTCCT +
Preference number: 4 (lower is better)
Translates to: MMHVGVSFQALRLWSSHANIGTR*PLSYTP
Trigger: AGGAGTGTAAGACAAGGGCCATCTAGTGCCAATGTT...GGCATGGGAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCGGCATATTGTCGGGATaGAAAATATTCAGGGAAATC +
Preference number: 4 (lower is better)
Translates to: LYTVTCSQGRGTGGDGNSGILSG*KIFREI
Trigger: GATTTCCCTGAATATTTTCCATCCCGACAATATGCC...GGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCTGCCTCTTAGGGGCTTaGAGGATTAGGGATTCTGTG +
Preference number: 4 (lower is better)
Translates to: RINHVEAPGRSRVIRKKCCLLGA*RIRDSV
Trigger: CACAGAATCCCTAATCCTCCAAGCCCCTAAGAGGCA...GCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TCCCTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCTTATAGGCATATATaGCTAATCACAGCCATTCTC +
Preference number: 4 (lower is better)
Translates to: SLLAPAGGATEDRSEALCSYRHI*LITAIL
Trigger: GAGAATGGCTGTGATTAGCCATATATGCCTATAAGA...GCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GAACCCAAGAGCCACAGCCAGGCAGTCACTCTGTCACTACAGGACAGAGCTGTCCTTTTCTCATCCCCTTaGCCAAGACTTGGAGTTTGG +
Preference number: 4 (lower is better)
Translates to: EPKSHSQAVTLSLQDRAVLFSSP*PRLGVW
Trigger: CCAAACTCCAAGTCTTGGCCAAGGGGATGAGAAAAG...GACAGCTCTGTCCTGTAGTGACAGAGTGACTGCCTGGCTGTGGCTCTTGGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGCTTTTCTCATCCCCTTaGCCAAGACTTGGAGTTTGG +
Preference number: 4 (lower is better)
Translates to: ARINHVEAPGRSRVIRKKLFSSP*PRLGVW
Trigger: CCAAACTCCAAGTCTTGGCCAAGGGGATGAGAAAAG...CTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATACCTCCAGTCCCGCCGTaGACGATCCTGGTATCGCCT +
Preference number: 4 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCIPPVPP*TILVSP
Trigger: AGGCGATACCAGGATCGTCCACGGCGGGACTGGAGG...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367835.1
ENST00000537209.5
CDS-3UTR TCA 90 bp CTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACCACCCTCCTCCTCAGTaGGATTACTCAGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LGPKRSSHVVSGNAEAVDHPPPQ*DYSAPS
Trigger: GGAAGGAGCTGAGTAATCTCACTGAGGAGGAGGGTG...GTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367838.5
ENST00000537209.5
CDS-3UTR TCA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATAGCATGCTGGCAGAGCTaGTCAGCAGGTAGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCIACWQS*SAGRGG
Trigger: CCCTCCTCTACCTGCTGATCAGCTCTGCCAGCATGC...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367838.5
ENST00000537209.5
CDS-3UTR TCA 90 bp CATCACTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGCAGCCCGGTTCCCTGTaGTCTTCATGGGGTACACCA +
Preference number: 4 (lower is better)
Translates to: HHWDLKEAHMWSLEMLKLQPGSL*SSWGTP
Trigger: TGGTGTACCCCATGAAGATCACAGGGAACCGGGCTG...CAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAGTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACGTCTTAGTCAAACTCCACGGATaGCCAACCAAACAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: AVLGTTVPFSPVKQWYVLVKLHG*PTKQGW
Trigger: CCACCCCTGTTTGGTTGGTCATCCGTGGAGTTTGAC...TAAGACGTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATATTCCTCCCGGTCCTCTaGGCATCCTCCTCCACGATG +
Preference number: 4 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCIFLPVL*ASSSTM
Trigger: CATCGTGGAGGAGGATGCTCAGAGGACCGGGAGGAA...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CATCACTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGATTCCTCCTGCTGCCTaGAGAGGAGGTGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: HHWDLKEAHMWSLEMLKLIPPAA*RGGGGA
Trigger: AGCACCTCCACCTCCTCTTCAGGCAGCAGGAGGAAT...CAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAGTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTGGTTTCTCCCTTTTGGGGCCTCAGAGGCGATaGCAACCATGTAGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: KHLVPALPLVFYSGFSLLGPQRR*QPCRGP
Trigger: GGGGCCCCTACATGGTTGTCATCGCCTCTGAGGCCC...CAAAAGGGAGAAACCACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTGGTGGGCAAGTGCAGTaGGAGGGAGGGTTGTCATCA +
Preference number: 4 (lower is better)
Translates to: GPKRSSHVVSGNAEAVDCGGQVQ*EGGLSS
Trigger: TGATGACAACCCTCCCTCTCACTGCACTTGCCCACC...ACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATGCCAGCTGTACACAGTaGCATGCTCCCAAGGCCGCG +
Preference number: 4 (lower is better)
Translates to: RSSHVVSGNAEAVDCRHYASCTQ*HAPKAA
Trigger: CGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGC...ATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TGCTCCTTCCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGTGGTTTCTCCCTTTTaGAATACCAAAGAACTTGTC +
Preference number: 4 (lower is better)
Translates to: CSFPVCGQLYTVTCSQGRVVSPF*NTKELV
Trigger: GACAAGTTCTTTGGTATTTCAAAAGGGAGAAACCAC...GCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGGAAGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GGAGGAAATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCCTGCTTTACAAATCCTaGGAACACCAAAGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: GGNDACGGLLPSPSSLVLLLYKS*EHQRSE
Trigger: CTCTGACCTTTGGTGTTCTCAGGATTTGTAAAGCAG...GAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCATTTCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATACCCCTTCTGAGATGGTaGCCCTGCCCCTCATGCATC +
Preference number: 4 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCIPLLRW*PCPSCI
Trigger: GATGCATGAGGGGCAGGGTCACCATCTCAGAAGGGG...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCTGTGCTTCCCCTTCTaGGATGGTGACCCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: NAEAVDCRHYFQSLSWWLLCFPF*DGDPAP
Trigger: AGGGGCAGGGTCACCATCTCAGAAGGGGAAGCACAG...CAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTAAAGCAGAGAAGTCCTaGACTTATTTAGTCATGATG +
Preference number: 4 (lower is better)
Translates to: RVPHCPHQPCRGTRTVACKAEKS*TYLVMM
Trigger: CATCATGACTAAATAAGTTCAGGACTTCTCTGCTTT...ACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TGCTCCTTCCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCTGCACTGGGGTAAAATaGGATAAAGCATTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: CSFPVCGQLYTVTCSQGRCTGVK*DKAFGS
Trigger: ACTTCCAAATGCTTTATCTCATTTTACCCCAGTGCA...GCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGGAAGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGGCTTAACTTACTTTaGGACCTCAGACAATTGCCC +
Preference number: 4 (lower is better)
Translates to: ARINHVEAPGRSRVIRKKWLNLL*DLRQLP
Trigger: GGGCAATTGTCTGAGGTCTCAAAGTAAGTTAAGCCA...CTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATCCACACCCTTTGCCCTaGGCGGGACGTGGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: RSSHVVSGNAEAVDCRHYPHPLP*AGRGVS
Trigger: AGAGACTCCACGTCCCGCTCAGGGCAAAGGGTGTGG...ATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367836.5
ENST00000367838.5
ENST00000539777.5
CDS-3UTR TCA 90 bp GGTCACTCAAACATCACACATAGAATCTATTTAATGAGGCTTTCCCATGTGAACTCCAGCCGAGGGGCGTaGCCGCTTCTCCCCACACCC +
Preference number: 4 (lower is better)
Translates to: GHSNITHRIYLMRLSHVNSSRGA*PLLPTP
Trigger: GGGTGTGGGGAGAAGCGGTCACGCCCCTCGGCTGGA...GTTCACATGGGAAAGCCTCATTAAATAGATTCTATGTGTGATGTTTGAGTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539777.5
CDS-3UTR GCA 90 bp GGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTGCACGAGCATCCATCTaGCTTCTGCCAGGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: GPKRSSHVVSGNAEAVDCARASI*LLPGSV
Trigger: GACAGAGCCTGGCAGAAGGCAGATGGATGCTCGTGC...ACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000537209.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGGAGGCTCATGGTCAGTaGACCTCGGCGTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SHVVSGNAEAVDCRHYFQEAHGQ*TSAWGG
Trigger: CCCACCCCACGCCGAGGTGCACTGACCATGAGCCTC...CTGAAAATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367838.5
ENST00000537209.5
CDS-3UTR GCA 90 bp CTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACCCAGATGTAGACAAGTaGCATCACAGCCCGGTTCCC +
Preference number: 4 (lower is better)
Translates to: LGPKRSSHVVSGNAEAVDPDVDK*HHSPVP
Trigger: GGGAACCGGGCTGTGATGGCACTTGTCTACATCTGG...GTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CCTGGTATCTGTGGCATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAAACGACTGTGCCACAGTaGACCTTGCGTGCCTTGACC +
Preference number: 4 (lower is better)
Translates to: PGICGIAQGPNKAEISMKTTVPQ*TLRALT
Trigger: GGTCAAGGCACGCAAGGTGCACTGTGGCACAGTCGT...TTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTATGCCACAGATACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ACCAAGGGCATTTCTCAGGGAGAATGTCCTTTCTGGACTGTAAGGAAGGTCAAGAAGAGGAGGTGGAGGTaGTGGAGTTCTTCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: TKGISQGECPFWTVRKVKKRRWR*WSSSSR
Trigger: CCGGGAGGAAGAACTCCAGCACCTCCACCTCCTCTT...CTTGACCTTCCTTACAGTCCAGAAAGGACATTCTCCCTGAGAAATGCCCTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGGCATTCCTCCTGCTaGCTGAAGAGGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GPKRSSHVVSGNAEAVDCRHSSC*LKRRWR
Trigger: CCTCCACCTCCTCTTCAGGCAGCAGGAGGAATGCCT...ACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GGCCGTGGACTACACGATAAGGGCAAAGGAATTCAAAACAAGAGTGCCCAGCCAGGCTTTGGCCAAGCTTaGTGCGTAACTGTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: GRGLHDKGKGIQNKSAQPGFGQA*CVTVQG
Trigger: TCCTTGGACAGTTACGCAGCAAGCTTGGCCAAAGCC...TGGCTGGGCACTCTTGTTTTGAATTCCTTTGCCCTTATCGTGTAGTCCACGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CGTTTCAAAGCCAAGCTGCTGCACTCAAGAATGCCTACACCTAACCAGCAACCCGGCTTTGGCCAAGCTTaGTGCGTAACTGTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: RFKAKLLHSRMPTPNQQPGFGQA*CVTVQG
Trigger: TCCTTGGACAGTTACGCAGCAAGCTTGGCCAAAGCC...GGGTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTCCCCGGGACAGTCCGTaGTGTAACCAAGACCCCTGG +
Preference number: 4 (lower is better)
Translates to: EAHMWSLEMLKLWTVDIIPRDSP*CNQDPW
Trigger: CCAGGGGTCTTGGTTACAGCACGGACTGTCCCGGGG...AATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTCACAAGAGTTCTGCTaGCTCGGCGGCCCCCGAAGC +
Preference number: 4 (lower is better)
Translates to: EAHMWSLEMLKLWTVDIISQEFC*LGGPRS
Trigger: GCTTCGGGGGCCGCCGAGGCAGCAGAACTCTTGTGA...AATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATCTGTACACAGTGACATaGTCCCAAGGCCGCGGCACA +
Preference number: 4 (lower is better)
Translates to: AEAVDCRHYFQSLSWWLHLYTVT*SQGRGT
Trigger: TGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAG...ATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ACCAAGGGCATTTCTCAGGGAGAATGTCCTTTCTGGACTGTAAGGAAGGTCAAGCTGTACACAGTGACATaGTCCCAAGGCCGCGGCACA +
Preference number: 4 (lower is better)
Translates to: TKGISQGECPFWTVRKVKLYTVT*SQGRGT
Trigger: TGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAG...CTTGACCTTCCTTACAGTCCAGAAAGGACATTCTCCCTGAGAAATGCCCTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CGTTTCAAAGCCAAGCTGCTGCACTCAAGAATGCCTACACCTAACCAGCAACCCTGGCTGCATACCAGATaGTGCTCCTTCCCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: RFKAKLLHSRMPTPNQQPWLHTR*CSFPVC
Trigger: ACACACAGGGAAGGAGCAGCATCTGGTATGCAGCCA...GGGTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ATACAAAGGTCGGTCCGTGGGTCTGCTTTTGTGTTTTACCTATCTCTGCTTTACCAGGGTGGGCCAGTCTaGAAGAGGCCTGTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: IQRSVRGSAFVFYLSLLYQGGPV*KRPVAV
Trigger: GACAGCCACAGGCCTCTTGCAGACTGGCCCACCCTG...GTAAAGCAGAGATAGGTAAAACACAAAAGCAGACCCACGGACCGACCTTTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGGCCAATAACCCAGGTTaGTGGCTGTGGGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: NAEAVDCRHYFQSLSWWLANNPG*WLWVQG
Trigger: GCCCTGGACCCACAGCCAGCAACCTGGGTTATTGGC...CAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGCCTGCACTTCACATGTaGATGAGCAACCACACTCCA +
Preference number: 4 (lower is better)
Translates to: KKCCVILHSTLGRVLLLRPALHM*MSNHTP
Trigger: TGGAGTGTGGTTGCTCATGCACATGTGAAGTGCAGG...CCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATGCAGAGTGTCTGACCTaGACAGGTGAACCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: AEAVDCRHYFQSLSWWLHAECLT*TGEPAL
Trigger: GAGGGCAGGTTCACCTGTGCAGGTCAGACACTCTGC...ATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ACCAAGGGCATTTCTCAGGGAGAATGTCCTTTCTGGACTGTAAGGAAGGTCAAGGGAAGGCTGCAGGCCTaGCACTGCATGGCAGTTTAC +
Preference number: 4 (lower is better)
Translates to: TKGISQGECPFWTVRKVKGRLQA*HCMAVY
Trigger: GTAAACTGCCATGCAGTGGCAGGCCTGCAGCCTTCC...CTTGACCTTCCTTACAGTCCAGAAAGGACATTCTCCCTGAGAAATGCCCTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CGTTTCAAAGCCAAGCTGCTGCACTCAAGAATGCCTACACCTAACCAGCAACCCGAACTTCAGTCTTGGTaGCTCTGGCCAGGGAAATGG +
Preference number: 4 (lower is better)
Translates to: RFKAKLLHSRMPTPNQQPELQSW*LWPGKW
Trigger: CCATTTCCCTGGCCAGAGGCACCAAGACTGAAGTTC...GGGTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGCATCTGGCACAGTTCTCAAGTTCCAGATaGTACTTAGCCTTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: VILHSTLGRVLLLRHLAQFSSSR*YLAFPP
Trigger: GGGAGGAAAGGCTAAGTAGCATCTGGAACTTGAGAA...CTGTGCCAGATGCCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CGTTTCAAAGCCAAGCTGCTGCACTCAAGAATGCCTACACCTAACCAGCAACCCGAGACCTCAGACAATTaGCCTGGATTCTGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: RFKAKLLHSRMPTPNQQPETSDN*PGFCVP
Trigger: GGGGACACAGAATCCAGGGCAATTGTCTGAGGTCTC...GGGTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AGATTGTGCTCTAATGGACAGGGCAGACAAAGCCACAGAACCTTGATCTGCCTGCAGTGTGGTCTTGTCTaGCAGGCCTGTGATTCTCCC +
Preference number: 4 (lower is better)
Translates to: RLCSNGQGRQSHRTLICLQCGLV*QACDSP
Trigger: GGGAGAATCACAGGCCTGGCAGACAAGACCACACTG...CAGGCAGATCAAGGTTCTGTGGCTTTGTCTGCCCTGTCCATTAGAGCACAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TTCCTGGCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACATGATGGCGATGAACTaGGTGATGATGACGCCCCCT +
Preference number: 4 (lower is better)
Translates to: FLAVLGTTVPFSPVKQWYMMAMN*VMMTPP
Trigger: AGGGGGCGTCATCATCACCCAGTTCATCGCCATCAT...GTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGCCAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271357.9
ENST00000537209.5
CDS-3UTR CCA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATACCAACCAAACAGGGGTaGCAGGCAGCCGATGAGCGA +
Preference number: 4 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCIPTKQG*QAADER
Trigger: TCGCTCATCGGCTGCCTGCCACCCCTGTTTGGTTGG...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AGATTGTGCTCTAATGGACAGGGCAGACAAAGCCACAGAACCTTGATCTGCCTGCTCCTTCCCTGTGTGTaGCCAGCTGTACACAGTGAC +
Preference number: 4 (lower is better)
Translates to: RLCSNGQGRQSHRTLICLLLPCV*PAVHSD
Trigger: GTCACTGTGTACAGCTGGCCACACACAGGGAAGGAG...CAGGCAGATCAAGGTTCTGTGGCTTTGTCTGCCCTGTCCATTAGAGCACAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CGCGTGTCATTAGGAAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGTTTCAGTCCTTGTCCTaGTGGCTGCATACCAGATGC +
Preference number: 4 (lower is better)
Translates to: RVSLGRSAVSSFTVHWGGFQSLS*WLHTRC
Trigger: GCATCTGGTATGCAGCCACCAGGACAAGGACTGAAA...CCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTTCCTAATGACACGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCAAAGAAGCTCACATGTaGTCTCTGGAAATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: GPVLELRVPHCPHQPCRGKEAHM*SLEMLK
Trigger: CTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTT...GCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCATCAAACAAAGGTCGGTCCGTaGGTCTGCTTTTGTGTTTTA +
Preference number: 4 (lower is better)
Translates to: CFLCGPVLELRVPHCPHQTKVGP*VCFCVL
Trigger: TAAAACACAAAAGCAGACCCACGGACCGACCTTTGT...TTGATGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GGCCGTGGACTACACGATAAGGGCAAAGGAATTCAAAACAAGAGTGCCCAGCCACTACAGAGCCTAGCCTaGTGCTTCGCATACACTGGA +
Preference number: 4 (lower is better)
Translates to: GRGLHDKGKGIQNKSAQPLQSLA*CFAYTG
Trigger: TCCAGTGTATGCGAAGCACCAGGCTAGGCTCTGTAG...TGGCTGGGCACTCTTGTTTTGAATTCCTTTGCCCTTATCGTGTAGTCCACGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp ATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCTGTTTTAGTGGGGGCACTTaGGGTTTCGACCTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: INHVEAPGRSRVIRKKCCFSGGT*GFDLLH
Trigger: GTGCAGAAGGTCGAAACCCCAAGTGCCCCCACTAAA...ACAGCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CGCGTGTCATTAGGAAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGAGGCCTGCCACTGCATaGCAGTTTACAGCTAAAGAG +
Preference number: 4 (lower is better)
Translates to: RVSLGRSAVSSFTVHWGGRPATA*QFTAKE
Trigger: CTCTTTAGCTGTAAACTGCCATGCAGTGGCAGGCCT...CCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTTCCTAATGACACGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGCAAACCTGGTATCTGTaGCATAGCACAGGGACCCAA +
Preference number: 4 (lower is better)
Translates to: KKCCVILHSTLGRVLLLRQTWYL*HSTGTQ
Trigger: TTGGGTCCCTGTGCTATGCCACAGATACCAGGTTTG...CCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGGTGTGCTCTGTAATGTaGGACTCCCAATGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: KKCCVILHSTLGRVLLLRVCSVM*DSQCLL
Trigger: CAGAAGGCATTGGGAGTCCCACATTACAGAGCACAC...CCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACGTCTTACAGTCTTGGTGCCTCTaGCCAGGGAAATGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: AVLGTTVPFSPVKQWYVLQSWCL*PGKWLC
Trigger: ACACAGCCATTTCCCTGGCCAGAGGCACCAAGACTG...TAAGACGTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp ATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCTGTGTGAAGAAACACCAGTaGCTCAGCTTCAGCTGCACC +
Preference number: 4 (lower is better)
Translates to: INHVEAPGRSRVIRKKCCVKKHQ*LSFSCT
Trigger: GGTGCAGCTGAAGCTGAGCCACTGGTGTTTCTTCAC...ACAGCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CATCACTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGGTGGGCAGAGCATGCTaGACGACTGTAATCCCGGCT +
Preference number: 4 (lower is better)
Translates to: HHWDLKEAHMWSLEMLKLVGRAC*TTVIPA
Trigger: AGCCGGGATTACAGTCGTCCAGCATGCTCTGCCCAC...CAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAGTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367835.1
ENST00000367838.5
CDS-3UTR TCA 90 bp AATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCAGCCCGGTTCCCTGTaGTCTTCATGGGGTACACCA +
Preference number: 4 (lower is better)
Translates to: NAEAVDCRHYFQSLSWWLQPGSL*SSWGTP
Trigger: TGGTGTACCCCATGAAGATCACAGGGAACCGGGCTG...CAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CCTGGTATCTGTGGCATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAACATAGCACACCAGCATaGCCAGAAAGGGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: PGICGIAQGPNKAEISMKHSTPA*PERGRG
Trigger: CCCTCTTCCCCTTTCTGGTCATGCTGGTGTGCTATG...TTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTATGCCACAGATACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGTGGCCACGCGGAAGATaGAGCCATAGCACACCAGCA +
Preference number: 4 (lower is better)
Translates to: NAEAVDCRHYFQSLSWWLWPRGR*SHSTPA
Trigger: TGCTGGTGTGCTATGGCTTCATCTTCCGCGTGGCCA...CAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GTTGTGAATGTATCTTGTGGTCCATCCAGAGACATGTCTAATCTGCAAGTATCTGCACCTTGCGTGCCTTaGCCCTGGCCACGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: VVNVSCGPSRDMSNLQVSAPCVP*PWPRGR
Trigger: TCTTCCGCGTGGCCAGGGTCAAGGCACGCAAGGTGC...AGATACTTGCAGATTAGACATGTCTCTGGATGGACCACAAGATACATTCACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AGATTGTGCTCTAATGGACAGGGCAGACAAAGCCACAGAACCTTGATCTGCCTGCATCATATCTGTCCCTaGGTCCTGGGAGCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: RLCSNGQGRQSHRTLICLHHICP*VLGAAE
Trigger: TTCAGCTGCTCCCAGGACTCAGGGACAGATATGATG...CAGGCAGATCAAGGTTCTGTGGCTTTGTCTGCCCTGTCCATTAGAGCACAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGACTTCAGCTTTCACATaGAGAATCGAGTTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: ARINHVEAPGRSRVIRKKTSAFT*RIEFLA
Trigger: TGCCAAGAACTCGATTCTTCATGTGAAAGCTGAAGT...CTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AATCTACCTTCTGCCAACCAAAGCAGAGAAGTCCTGAACTTATTTAGTCATGATAGCCCCACGGCACCCTaGGGCCCTCATCTCTGCTCG +
Preference number: 4 (lower is better)
Translates to: NLPSANQSREVLNLFSHDSPTAP*GPHLCS
Trigger: CGAGCAGAGATGAGGGCCTCAGGGTGCCGTGGGGCT...ATCATGACTAAATAAGTTCAGGACTTCTCTGCTTTGGTTGGCAGAAGGTAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCTCTGTGCACACTAGTTaGTCAGGAATATGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: RINHVEAPGRSRVIRKKCSVHTS*SGIWSL
Trigger: AAGGGACCATATTCCTGATCAACTAGTGTGCACAGA...GCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCATCAAATACCTCATCTTCCTTaGCCTATAAGACTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: CFLCGPVLELRVPHCPHQIPHLP*PIRLAP
Trigger: AGGAGCTAGTCTTATAGGTCAAGGAAGATGAGGTAT...TTGATGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTGAGCTCGCAGCCCTCTaGCCACACAGTGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: EAHMWSLEMLKLWTVDIIELAAL*PHSAPS
Trigger: TGAAGGAGCACTGTGTGGTCAGAGGGCTGCGAGCTC...AATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367836.5
ENST00000537209.5
CDS-3UTR GCA 90 bp ATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCTGTGGTCCCCAAAGCACATaGCCAGTAGTTCTTTGCGAA +
Preference number: 4 (lower is better)
Translates to: INHVEAPGRSRVIRKKCCGPQST*PVVLCE
Trigger: TTCGCAAAGAACTACTGGGCATGTGCTTTGGGGACC...ACAGCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACGGCTTTGGCCAAGCTTaGTGCGTAACTGTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: LGPKRSSHVVSGNAEAVDGFGQA*CVTVQG
Trigger: TCCTTGGACAGTTACGCAGCAAGCTTGGCCAAAGCC...GTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTGGTTTCTCCCTTTTGCCCCGGGACAGTCCGTaGTGTAACCAAGACCCCTGG +
Preference number: 4 (lower is better)
Translates to: KHLVPALPLVFYSGFSLLPRDSP*CNQDPW
Trigger: CCAGGGGTCTTGGTTACAGCACGGACTGTCCCGGGG...CAAAAGGGAGAAACCACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTCCTTCTTCGATGCTCTaGAACTGCAGCCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GPKRSSHVVSGNAEAVDCPSSML*NCSLWL
Trigger: GAGCCAGAGGCTGCAGTTGCAGAGCATCGAAGAAGG...ACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATACTGTACACAGTGACATaGTCCCAAGGCCGCGGCACA +
Preference number: 4 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCILYTVT*SQGRGT
Trigger: TGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAG...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTCCTTGTCCTGGTGGCTaGATACCAGATGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GPKRSSHVVSGNAEAVDCPCPGG*IPDAAP
Trigger: AGGAGCAGCATCTGGTATGCAGCCACCAGGACAAGG...ACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ACCAAGGGCATTTCTCAGGGAGAATGTCCTTTCTGGACTGTAAGGAAGGTCAAGCCTTGTCCTGGTGGCTaGATACCAGATGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: TKGISQGECPFWTVRKVKPCPGG*IPDAAP
Trigger: AGGAGCAGCATCTGGTATGCAGCCACCAGGACAAGG...CTTGACCTTCCTTACAGTCCAGAAAGGACATTCTCCCTGAGAAATGCCCTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGGTCATTAGGAAGAAGTaGTGTGTCATCCTTCACAGT +
Preference number: 4 (lower is better)
Translates to: ARINHVEAPGRSRVIRKKVIRKK*CVILHS
Trigger: ACTGTGAAGGATGACACAGCACTTCTTCCTAATGAC...CTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CCTGGTATCTGTGGCATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAACTGAGGGTCCCACACTaGCCGCATCAACCATGTAGA +
Preference number: 4 (lower is better)
Translates to: PGICGIAQGPNKAEISMKLRVPH*PHQPCR
Trigger: TCTACATGGTTGATGCGGGCAGTGTGGGACCCTCAG...TTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTATGCCACAGATACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CATGACTTAACCATACCCACGTCTTCACCATCCTCACTATATCACACTTGCACTCGCTCCGAAGCGCTCTaGTCCTGGGTGCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: HDLTIPTSSPSSLYHTCTRSEAL*SWVLSL
Trigger: CAGAGAAAGCACCCAGGAGCAGAGCGCTTCGGAGCG...AGTGCAAGTGTGATATAGTGAGGATGGTGAAGACGTGGGTATGGTTAAGTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGGATAATAGTAACTGTTaGTCTTGGGAGTGTGCCATG +
Preference number: 4 (lower is better)
Translates to: ARINHVEAPGRSRVIRKKDNSNC*SWECAM
Trigger: CATGGCACACTCCCAAGAGCAACAGTTACTATTATC...CTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTGTTTTACCTATCTCTaGTTTACAAATCCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: QLYTVTCSQGRGTGGDGNCFTYL*FTNPEN
Trigger: GTTCTCAGGATTTGTAAAGCAGAGATAGGTAAAACA...GTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CGTTTCAAAGCCAAGCTGCTGCACTCAAGAATGCCTACACCTAACCAGCAACCCCCTGCACTTCACATGTaGATGAGCAACCACACTCCA +
Preference number: 4 (lower is better)
Translates to: RFKAKLLHSRMPTPNQQPPALHM*MSNHTP
Trigger: TGGAGTGTGGTTGCTCATGCACATGTGAAGTGCAGG...GGGTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGAGGTCTTTTACAAACTaGAGACCAGGGGACCAGCTA +
Preference number: 4 (lower is better)
Translates to: KKCCVILHSTLGRVLLLRRSFTN*RPGDQL
Trigger: TAGCTGGTCCCCTGGTCTGCAGTTTGTAAAAGACCT...CCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCCCATGCCAAATATGGTTCTAGCTaGCAAGCATCCTTCAAGACT +
Preference number: 4 (lower is better)
Translates to: MMHVGVSFQALRLWSSHAKYGSS*QASFKT
Trigger: AGTCTTGAAGGATGCTTGGCAGCTAGAACCATATTT...GGCATGGGAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATAGATATCCTCAGAAATaGTCTCAGGAACTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: CGQLYTVTCSQGRGTGGDRYPQK*SQELQN
Trigger: ATTTTGAAGTTCCTGAGAGCATTTCTGAGGATATCT...ATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CGTTTCAAAGCCAAGCTGCTGCACTCAAGAATGCCTACACCTAACCAGCAACCCGTTGAGCTGTGTGTGTaGTCTGTAATGTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: RFKAKLLHSRMPTPNQQPVELCV*SVMWDS
Trigger: GGAGTCCCACATTACAGAGCACACACACAGCTCAAC...GGGTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TTCCTGGCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACCACATGCCAGCTCACTaGCTCCTCTTTATAGCCACA +
Preference number: 4 (lower is better)
Translates to: FLAVLGTTVPFSPVKQWYHMPAH*LLFIAT
Trigger: TGTGGCTATAAAGAGGAGGCAGTGAGCTGGCATGTG...GTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGCCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATGGGGTGGGCAGAGCATaGTGGACGACTGTAATCCCG +
Preference number: 4 (lower is better)
Translates to: RSSHVVSGNAEAVDCRHYGVGRA*WTTVIP
Trigger: CGGGATTACAGTCGTCCAGCATGCTCTGCCCACCCC...ATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367835.1
ENST00000367838.5
CDS-3UTR GCA 90 bp GGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTTCAGAGGACGCACAGTaGACCAGGCCAACAGACGTT +
Preference number: 4 (lower is better)
Translates to: GPKRSSHVVSGNAEAVDCSEDAQ*TRPTDV
Trigger: AACGTCTGTTGGCCTGGTGCACTGTGCGTCCTCTGA...ACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367836.5
CDS-3UTR GCA 90 bp TCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCAGAGGACGCACAGTaGACCAGGCCTCTCGGCTCG +
Preference number: 4 (lower is better)
Translates to: SHVVSGNAEAVDCRHYFQSEDAQ*TRPLGS
Trigger: CGAGCCGAGAGGCCTGGTGCACTGTGCGTCCTCTGA...CTGAAAATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537209.5
CDS-3UTR CCA 90 bp CTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACATGATGGCGATGAACTaGGTGATGATGACGCCCCCT +
Preference number: 4 (lower is better)
Translates to: LGPKRSSHVVSGNAEAVDMMAMN*VMMTPP
Trigger: AGGGGGCGTCATCATCACCCAGTTCATCGCCATCAT...GTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367838.5
ENST00000537209.5
CDS-3UTR CCA 90 bp AGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATCCAACCAAACAGGGGTaGCAGGCAGCCGATGAGCGA +
Preference number: 4 (lower is better)
Translates to: RSSHVVSGNAEAVDCRHYPTKQG*QAADER
Trigger: TCGCTCATCGGCTGCCTGCCACCCCTGTTTGGTTGG...ATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CATCACTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGCCTGAAGAGGAGGTaGAGGTGCTGGAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: HHWDLKEAHMWSLEMLKLCLKRR*RCWSSS
Trigger: GGAAGAACTCCAGCACCTCCACCTCCTCTTCAGGCA...CAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGGGGCTTTGCACTGGTTaGCCGAGTAGACCACACCCT +
Preference number: 4 (lower is better)
Translates to: NAEAVDCRHYFQSLSWWLGLCTG*PSRPHP
Trigger: AGGGTGTGGTCTACTCGGCCAACCAGTGCAAAGCCC...CAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATAGGGCTTTGCACTGGTTaGCCGAGTAGACCACACCCT +
Preference number: 4 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCIGLCTG*PSRPHP
Trigger: AGGGTGTGGTCTACTCGGCCAACCAGTGCAAAGCCC...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATAGCTCCTTCTCTTGGGTaGGCAAGTGCAGTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCIAPSLG*ASAVRG
Trigger: CCCTCTCACTGCACTTGCCCACCCAAGAGAAGGAGC...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CATCACTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGCGGCCTCAATGGCTTTaGCCAAGCTTGCTGCGTAAC +
Preference number: 4 (lower is better)
Translates to: HHWDLKEAHMWSLEMLKLRPQWL*PSLLRN
Trigger: GTTACGCAGCAAGCTTGGCCAAAGCCATTGAGGCCG...CAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGCAACTGCAGCCTCTaGCTCACAAGAGTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: LGPKRSSHVVSGNAEAVDCNCSL*LTRVLL
Trigger: CAGCAGAACTCTTGTGAGCCAGAGGCTGCAGTTGCA...GTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TTCCTGGCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACTTTCCTGGCTGTGCTTaGCACTACAGTCCCATTCAG +
Preference number: 4 (lower is better)
Translates to: FLAVLGTTVPFSPVKQWYFPGCA*HYSPIQ
Trigger: CTGAATGGGACTGTAGTGCCAAGCACAGCCAGGAAA...GTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGCCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACGTCTTAGCCCCTCATGCATCTTaGTGGCTGGCATTCTATCCA +
Preference number: 4 (lower is better)
Translates to: AVLGTTVPFSPVKQWYVLAPHAS*WLAFYP
Trigger: TGGATAGAATGCCAGCCACCAAGATGCATGAGGGGC...TAAGACGTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACCTACAGAGCCTAGCCTaGTGCTTCGCATACACTGGA +
Preference number: 4 (lower is better)
Translates to: LGPKRSSHVVSGNAEAVDLQSLA*CFAYTG
Trigger: TCCAGTGTATGCGAAGCACCAGGCTAGGCTCTGTAG...GTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AGTCACCCTGTGACGGAGGACTCCCTCAATCCTGTGTGTCTCCACATTGAAACAAGGCCTGCCACTGCATaGCAGTTTACAGCTAAAGAG +
Preference number: 4 (lower is better)
Translates to: SHPVTEDSLNPVCLHIETRPATA*QFTAKE
Trigger: CTCTTTAGCTGTAAACTGCCATGCAGTGGCAGGCCT...TGTTTCAATGTGGAGACACACAGGATTGAGGGAGTCCTCCGTCACAGGGTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp ATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAAGAGGCAGAGGTGGGCCAAACCTGGTATCTGTaGCATAGCACAGGGACCCAA +
Preference number: 4 (lower is better)
Translates to: IAQGPNKAEISMKEAEVGQTWYL*HSTGTQ
Trigger: TTGGGTCCCTGTGCTATGCCACAGATACCAGGTTTG...GCCCACCTCTGCCTCTTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp ATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAAGAGGCAGAGGTGGGCGTTCTGCATATATTGTaGGTAGCATCCCTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: IAQGPNKAEISMKEAEVGVLHIL*VASLPC
Trigger: GCAGGGCAGGGATGCTACCCACAATATATGCAGAAC...GCCCACCTCTGCCTCTTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TTCCTGGCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACCCCTTGGCCAAGACTTaGAGTTTGGCTTTGACTCTG +
Preference number: 4 (lower is better)
Translates to: FLAVLGTTVPFSPVKQWYPLAKT*SLALTL
Trigger: CAGAGTCAAAGCCAAACTCCAAGTCTTGGCCAAGGG...GTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGCCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GGGAATATATATAGAAAACGTGAACCACACGCAGACGTAGGAATGCCATCCAGTCTGCACCCAGCAGAATaGGGTGGGCCTCTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: GNIYRKREPHADVGMPSSLHPAE*GGPLRS
Trigger: GCTTCTGAGAGGCCCACCCCATTCTGCTGGGTGCAG...ACTGGATGGCATTCCTACGTCTGCGTGTGGTTCACGTTTTCTATATATATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539777.5
CDS-3UTR CCA 90 bp CCCAACCCACAAGGACAGTATGGCTCTGCTCCTTCTTATAGGCATATATGGCTAGGACAGCATAGTAGCTaGTCCTCACGGATTCCAGCC +
Preference number: 4 (lower is better)
Translates to: PNPQGQYGSAPSYRHIWLGQHSS*SSRIPA
Trigger: GGCTGGAATCCGTGAGGACCAGCTACTATGCTGTCC...TAGCCATATATGCCTATAAGAAGGAGCAGAGCCATACTGTCCTTGTGGGTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539777.5
CDS-3UTR TCA 90 bp AATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGGTCAAACTCCACGGATaGCCAACCAAACAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: NAEAVDCRHYFQSLSWWLVKLHG*PTKQGW
Trigger: CCACCCCTGTTTGGTTGGTCATCCGTGGAGTTTGAC...CAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATACATAGCACACCAGCATaGCCAGAAAGGGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCIHSTPA*PERGRG
Trigger: CCCTCTTCCCCTTTCTGGTCATGCTGGTGTGCTATG...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTATTCCTCCTGCTGCCTaGAGAGGAGGTGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: EAHMWSLEMLKLWTVDIIIPPAA*RGGGGA
Trigger: AGCACCTCCACCTCCTCTTCAGGCAGCAGGAGGAAT...AATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CATCACTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGCATCATATCTGTCCCTaGGTCCTGGGAGCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: HHWDLKEAHMWSLEMLKLHHICP*VLGAAE
Trigger: TTCAGCTGCTCCCAGGACTCAGGGACAGATATGATG...CAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAGTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CCTGGTATCTGTGGCATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAACATCATATCTGTCCCTaGGTCCTGGGAGCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: PGICGIAQGPNKAEISMKHHICP*VLGAAE
Trigger: TTCAGCTGCTCCCAGGACTCAGGGACAGATATGATG...TTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTATGCCACAGATACCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TTCCTGGCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACCCTCCCCAAATAAGTTaGTTTTGGCTTCGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: FLAVLGTTVPFSPVKQWYPPQIS*FWLRPQ
Trigger: TTGAGGCCGAAGCCAAAATCAACTTATTTGGGGAGG...GTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGCCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CCTGGTATCTGTGGCATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAAGTGAAGAGGAGGAAATaGTGCATGTGGGGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: PGICGIAQGPNKAEISMKVKRRK*CMWGSP
Trigger: AGGAGACCCCCACATGCATCATTTCCTCCTCTTCAC...TTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTATGCCACAGATACCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp ATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCTGTTGTGCCATGCAGAACTaGGGCCAGCTATTTTCATTG +
Preference number: 4 (lower is better)
Translates to: INHVEAPGRSRVIRKKCCCAMQN*GQLFSL
Trigger: CAATGAAAATAGCTGGCCTCAGTTCTGCATGGCACA...ACAGCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGCTGTGCTTCCCCTTCTaGGATGGTGACCCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: SHVVSGNAEAVDCRHYFQLCFPF*DGDPAP
Trigger: AGGGGCAGGGTCACCATCTCAGAAGGGGAAGCACAG...CTGAAAATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGTGGAAGCAGAGTGTCTaGCCTGCACAGGTGAACCTG +
Preference number: 4 (lower is better)
Translates to: NAEAVDCRHYFQSLSWWLWKQSV*PAQVNL
Trigger: CAGGTTCACCTGTGCAGGTCAGACACTCTGCTTCCA...CAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCAGTGGCAATACCTGTaGACCTGGATGGGGTCATGC +
Preference number: 4 (lower is better)
Translates to: NAEAVDCRHYFQSLSWWLQWQYL*TWMGSC
Trigger: GCATGACCCCATCCAGGTTCACAGGTATTGCCACTG...CAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACGTCTTAGCCAGGGCTCAAGGCTaGACACATGTTGTGAATGTA +
Preference number: 4 (lower is better)
Translates to: AVLGTTVPFSPVKQWYVLARAQG*THVVNV
Trigger: TACATTCACAACATGTGTTCAGCCTTGAGCCCTGGC...TAAGACGTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GGAGGAAATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCTGCACTGGGGTAAAATaGGATAAAGCATTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: GGNDACGGLLPSPSSLVLCTGVK*DKAFGS
Trigger: ACTTCCAAATGCTTTATCTCATTTTACCCCAGTGCA...GAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCATTTCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTGGTTTCTCCCTTTTGACTCCTGACCTCAGGTaGTCTGCCCATCTCGACCCC +
Preference number: 4 (lower is better)
Translates to: KHLVPALPLVFYSGFSLLTPDLR*SAHLDP
Trigger: GGGGTCGAGATGGGCAGATCACCTGAGGTCAGGAGT...CAAAAGGGAGAAACCACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AAGGGTAATTCACTTTCTAGAACAGCTGCCTCTCAGCAACCAGCAAGATCTCCTTGTCTGCCAGGCCTGTaGTTCTCCCTAGGACTGTCT +
Preference number: 4 (lower is better)
Translates to: KGNSLSRTAASQQPARSPCLPGL*FSLGLS
Trigger: AGACAGTCCTAGGGAGAATCACAGGCCTGGCAGACA...AGGAGATCTTGCTGGTTGCTGAGAGGCAGCTGTTCTAGAAAGTGAATTACCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACGCCCCACTTTTCTCCTaGAAACCTTTGTGGTGCCTA +
Preference number: 4 (lower is better)
Translates to: LGPKRSSHVVSGNAEAVDAPLFS*KPLWCL
Trigger: TAGGCACCACAAAGGTTTTCAGGAGAAAAGTGGGGC...GTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367835.1
ENST00000537209.5
CDS-3UTR TCA 90 bp GTTGTGAATGTATCTTGTGGTCCATCCAGAGACATGTCTAATCTGCAAGTATCTCCACACCCTTTGCCCTaGGCGGGACGTGGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: VVNVSCGPSRDMSNLQVSPHPLP*AGRGVS
Trigger: AGAGACTCCACGTCCCGCTCAGGGCAAAGGGTGTGG...AGATACTTGCAGATTAGACATGTCTCTGGATGGACCACAAGATACATTCACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539777.5
CDS-3UTR GCA 90 bp CCTGGTATCTGTGGCATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAATTCACACTGCTGCCCTaGACTCCCTCGGAACCAAAA +
Preference number: 4 (lower is better)
Translates to: PGICGIAQGPNKAEISMKFTLLP*TPSEPK
Trigger: TTTTGGTTCCGAGGGAGTGCAGGGCAGCAGTGTGAA...TTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTATGCCACAGATACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GTTGTGAATGTATCTTGTGGTCCATCCAGAGACATGTCTAATCTGCAAGTATCTACAGTGCACCTTGCGTaGCTTGACCCTGGCCACGCG +
Preference number: 4 (lower is better)
Translates to: VVNVSCGPSRDMSNLQVSTVHLA*LDPGHA
Trigger: CGCGTGGCCAGGGTCAAGGCACGCAAGGTGCACTGT...AGATACTTGCAGATTAGACATGTCTCTGGATGGACCACAAGATACATTCACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTAAGAGGAGGTGGAGGTaGTGGAGTTCTTCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: EAHMWSLEMLKLWTVDIIKRRWR*WSSSSR
Trigger: CCGGGAGGAAGAACTCCAGCACCTCCACCTCCTCTT...AATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATAGAAAGGCATTCCTCCTaGTGCCTGAAGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCIERHSS*CLKRRW
Trigger: CCACCTCCTCTTCAGGCAGCAGGAGGAATGCCTTTC...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACGGTCCCCAAAGCACATaGCCAGTAGTTCTTTGCGAA +
Preference number: 4 (lower is better)
Translates to: LGPKRSSHVVSGNAEAVDGPQST*PVVLCE
Trigger: TTCGCAAAGAACTACTGGGCATGTGCTTTGGGGACC...GTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CATCACTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGGGCTTTGGCCAAGCTTaGTGCGTAACTGTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: HHWDLKEAHMWSLEMLKLGFGQA*CVTVQG
Trigger: TCCTTGGACAGTTACGCAGCAAGCTTGGCCAAAGCC...CAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAGTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATACCTTCTTCGATGCTCTaGAACTGCAGCCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCIPSSML*NCSLWL
Trigger: GAGCCAGAGGCTGCAGTTGCAGAGCATCGAAGAAGG...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCCTTGTCCTGGTGGCTaGATACCAGATGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: NAEAVDCRHYFQSLSWWLPCPGG*IPDAAP
Trigger: AGGAGCAGCATCTGGTATGCAGCCACCAGGACAAGG...CAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATACCTTGTCCTGGTGGCTaGATACCAGATGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCIPCPGG*IPDAAP
Trigger: AGGAGCAGCATCTGGTATGCAGCCACCAGGACAAGG...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTGGTTTCTCCCTTTTGCGCTCCGAAGCGCTCTaGTCCTGGGTGCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: KHLVPALPLVFYSGFSLLRSEAL*SWVLSL
Trigger: CAGAGAAAGCACCCAGGAGCAGAGCGCTTCGGAGCG...CAAAAGGGAGAAACCACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CGTTTCAAAGCCAAGCTGCTGCACTCAAGAATGCCTACACCTAACCAGCAACCCTCTATTTCCTGGCTGTaGTTGGCACTACAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: RFKAKLLHSRMPTPNQQPSISWL*LALQSH
Trigger: ATGGGACTGTAGTGCCAAGCACAGCCAGGAAATAGA...GGGTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATCTTGGGAGTGTGCCATaGAGAACTGAGGCCAGCTAT +
Preference number: 4 (lower is better)
Translates to: AEAVDCRHYFQSLSWWLHLGSVP*RTEASY
Trigger: ATAGCTGGCCTCAGTTCTGCATGGCACACTCCCAAG...ATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCGATAATAGTAACTGTTaGTCTTGGGAGTGTGCCATG +
Preference number: 4 (lower is better)
Translates to: RINHVEAPGRSRVIRKKCDNSNC*SWECAM
Trigger: CATGGCACACTCCCAAGAGCAACAGTTACTATTATC...GCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACCCTGCACTTCACATGTaGATGAGCAACCACACTCCA +
Preference number: 4 (lower is better)
Translates to: LGPKRSSHVVSGNAEAVDPALHM*MSNHTP
Trigger: TGGAGTGTGGTTGCTCATGCACATGTGAAGTGCAGG...GTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GACTTGACTTTGCTAGTTATTAGAATCGGTATCCACAGGTCCTGCTCCCTAAATTCCCATCAGGAAGGCTaGAGGCCTGCCACTGCATGG +
Preference number: 4 (lower is better)
Translates to: DLTLLVIRIGIHRSCSLNSHQEG*RPATAW
Trigger: CCATGCAGTGGCAGGCCTGCAGCCTTCCTGATGGGA...ATTTAGGGAGCAGGACCTGTGGATACCGATTCTAATAACTAGCAAAGTCAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GGCCGTGGACTACACGATAAGGGCAAAGGAATTCAAAACAAGAGTGCCCAGCCAATGTGGGACTCCCAATaGCTTCTGGGTCAAAACAAC +
Preference number: 4 (lower is better)
Translates to: GRGLHDKGKGIQNKSAQPMWDSQ*LLGQNN
Trigger: GTTGTTTTGACCCAGAAGGCATTGGGAGTCCCACAT...TGGCTGGGCACTCTTGTTTTGAATTCCTTTGCCCTTATCGTGTAGTCCACGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACGTCTTAGTTGAGCTGTGTGTGTaGTCTGTAATGTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: AVLGTTVPFSPVKQWYVLVELCV*SVMWDS
Trigger: GGAGTCCCACATTACAGAGCACACACACAGCTCAAC...TAAGACGTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ATACAAAGGTCGGTCCGTGGGTCTGCTTTTGTGTTTTACCTATCTCTGCTTTACGTTCATCCTTGGCTCTaGACAGCCACACCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: IQRSVRGSAFVFYLSLLYVHPWL*TATPLP
Trigger: TGGCAGCGGTGTGGCTGTGCAGAGCCAAGGATGAAC...GTAAAGCAGAGATAGGTAAAACACAAAAGCAGACCCACGGACCGACCTTTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AGAGCTGGGCCAATAACCCAGGTTGCTGGCTGTGGGTCCAGGGCTGCTTCTATCGAGACATGTCTAATCTaGAAGTATCTAAGAGGCATA +
Preference number: 4 (lower is better)
Translates to: RAGPITQVAGCGSRAASIETCLI*KYLRGI
Trigger: TATGCCTCTTAGATACTTGCAGATTAGACATGTCTC...GATAGAAGCAGCCCTGGACCCACAGCCAGCAACCTGGGTTATTGGCCCAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AAGGGTAATTCACTTTCTAGAACAGCTGCCTCTCAGCAACCAGCAAGATCTCCTCAGAAGGCAGTCACATaGCAGCTCACTGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: KGNSLSRTAASQQPARSPQKAVT*QLTASS
Trigger: AGAGGAGGCAGTGAGCTGGCATGTGACTGCCTTCTG...AGGAGATCTTGCTGGTTGCTGAGAGGCAGCTGTTCTAGAAAGTGAATTACCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ATACAAAGGTCGGTCCGTGGGTCTGCTTTTGTGTTTTACCTATCTCTGCTTTACTGGCTCAGCTTCAGCTaGACCCCAGGCATTGTGCTG +
Preference number: 4 (lower is better)
Translates to: IQRSVRGSAFVFYLSLLYWLSFS*TPGIVL
Trigger: CAGCACAATGCCTGGGGTGCAGCTGAAGCTGAGCCA...GTAAAGCAGAGATAGGTAAAACACAAAAGCAGACCCACGGACCGACCTTTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CGCGTGTCATTAGGAAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGATAAGACTAGCTCCTTaGTTTTCTCATCCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: RVSLGRSAVSSFTVHWGGIRLAP*FSHPLG
Trigger: GCCAAGGGGATGAGAAAAGCAAGGAGCTAGTCTTAT...CCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTTCCTAATGACACGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTTCCATTCCCTGCGGATaGAGCTCGTCACCACAAAAG +
Preference number: 4 (lower is better)
Translates to: GPKRSSHVVSGNAEAVDCSIPCG*SSSPQK
Trigger: CTTTTGTGGTGACGAGCTCCATCCGCAGGGAATGGA...ACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367838.5
ENST00000537209.5
CDS-3UTR CCA 90 bp AGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATGGGCTTTGCACTGGTTaGCCGAGTAGACCACACCCT +
Preference number: 4 (lower is better)
Translates to: RSSHVVSGNAEAVDCRHYGLCTG*PSRPHP
Trigger: AGGGTGTGGTCTACTCGGCCAACCAGTGCAAAGCCC...ATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATCAAAGGACAGCCATGTaGCCCAAGTCTCCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: RSSHVVSGNAEAVDCRHYQRTAM*PKSPGS
Trigger: CGAGCCTGGAGACTTGGGCCACATGGCTGTCCTTTG...ATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTGCTCCTTCTCTTGGGTaGGCAAGTGCAGTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: EAHMWSLEMLKLWTVDIIAPSLG*ASAVRG
Trigger: CCCTCTCACTGCACTTGCCCACCCAAGAGAAGGAGC...AATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATACGGCCTCAATGGCTTTaGCCAAGCTTGCTGCGTAAC +
Preference number: 4 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCIRPQWL*PSLLRN
Trigger: GTTACGCAGCAAGCTTGGCCAAAGCCATTGAGGCCG...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATATGGCTTCGGCCTCAATaGCTTTGGCCAAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCIWLRPQ*LWPSLL
Trigger: CAGCAAGCTTGGCCAAAGCCATTGAGGCCGAAGCCA...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AGATTGTGCTCTAATGGACAGGGCAGACAAAGCCACAGAACCTTGATCTGCCTGTTTCAGTCCTTGTCCTaGTGGCTGCATACCAGATGC +
Preference number: 4 (lower is better)
Translates to: RLCSNGQGRQSHRTLICLFQSLS*WLHTRC
Trigger: GCATCTGGTATGCAGCCACCAGGACAAGGACTGAAA...CAGGCAGATCAAGGTTCTGTGGCTTTGTCTGCCCTGTCCATTAGAGCACAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CCCAACCCACAAGGACAGTATGGCTCTGCTCCTTCTTATAGGCATATATGGCTATCTGCAAGAGGCCTGTaGCTGTCCCTATTAGCACCA +
Preference number: 4 (lower is better)
Translates to: PNPQGQYGSAPSYRHIWLSARGL*LSLLAP
Trigger: TGGTGCTAATAGGGACAGCCACAGGCCTCTTGCAGA...TAGCCATATATGCCTATAAGAAGGAGCAGAGCCATACTGTCCTTGTGGGTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GATGGGGTCATGCATGTAAGCAGGCTAGCCAGGTGGTCCTTGGTCACCAAGGCCAGTCCGGTAAAACAGTaGTACGTCTTAAATGGATTT +
Preference number: 4 (lower is better)
Translates to: DGVMHVSRLARWSLVTKASPVKQ*YVLNGF
Trigger: AAATCCATTTAAGACGTACCACTGTTTTACCGGACT...GGCCTTGGTGACCAAGGACCACCTGGCTAGCCTGCTTACATGCATGACCCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp ATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCTGTAGTAACTGTTGCTCTTaGGAGTGTGCCATGCAGAAC +
Preference number: 4 (lower is better)
Translates to: INHVEAPGRSRVIRKKCCSNCCS*ECAMQN
Trigger: GTTCTGCATGGCACACTCCCAAGAGCAACAGTTACT...ACAGCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGACAAAGGTCGGTCCGTaGGTCTGCTTTTGTGTTTTA +
Preference number: 4 (lower is better)
Translates to: KKCCVILHSTLGRVLLLRTKVGP*VCFCVL
Trigger: TAAAACACAAAAGCAGACCCACGGACCGACCTTTGT...CCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AGTCACCCTGTGACGGAGGACTCCCTCAATCCTGTGTGTCTCCACATTGAAACACCTCATGCATCTTGGTaGCTGGCATTCTATCCAGAT +
Preference number: 4 (lower is better)
Translates to: SHPVTEDSLNPVCLHIETPHASW*LAFYPD
Trigger: ATCTGGATAGAATGCCAGCCACCAAGATGCATGAGG...TGTTTCAATGTGGAGACACACAGGATTGAGGGAGTCCTCCGTCACAGGGTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TTCCTGGCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACGGACCAGCTAACCATTaGTTTCTGCCACACAACACA +
Preference number: 4 (lower is better)
Translates to: FLAVLGTTVPFSPVKQWYGPANH*FLPHNT
Trigger: TGTGTTGTGTGGCAGAAACCAATGGTTAGCTGGTCC...GTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGCCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CCTGGTATCTGTGGCATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAATTTAGTGGGGGCACTTaGGGTTTCGACCTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: PGICGIAQGPNKAEISMKFSGGT*GFDLLH
Trigger: GTGCAGAAGGTCGAAACCCCAAGTGCCCCCACTAAA...TTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTATGCCACAGATACCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACGTCTTAAGGCCTGCCACTGCATaGCAGTTTACAGCTAAAGAG +
Preference number: 4 (lower is better)
Translates to: AVLGTTVPFSPVKQWYVLRPATA*QFTAKE
Trigger: CTCTTTAGCTGTAAACTGCCATGCAGTGGCAGGCCT...TAAGACGTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATGTGAAGAAACACCAGTaGCTCAGCTTCAGCTGCACC +
Preference number: 4 (lower is better)
Translates to: AEAVDCRHYFQSLSWWLHVKKHQ*LSFSCT
Trigger: GGTGCAGCTGAAGCTGAGCCACTGGTGTTTCTTCAC...ATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATAGAAGGCTGCTCACCTaGTCCTCACGGATTCCAGCC +
Preference number: 4 (lower is better)
Translates to: RSSHVVSGNAEAVDCRHYRRLLT*SSRIPA
Trigger: GGCTGGAATCCGTGAGGACCAGGTGAGCAGCCTTCT...ATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367836.5
CDS-3UTR CCA 90 bp ATACAAAGGTCGGTCCGTGGGTCTGCTTTTGTGTTTTACCTATCTCTGCTTTACGTGGGCAGAGCATGCTaGACGACTCCTCTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: IQRSVRGSAFVFYLSLLYVGRAC*TTPLAD
Trigger: GTCAGCAAGAGGAGTCGTCCAGCATGCTCTGCCCAC...GTAAAGCAGAGATAGGTAAAACACAAAAGCAGACCCACGGACCGACCTTTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537209.5
CDS-3UTR TCA 90 bp ACCAAGGGCATTTCTCAGGGAGAATGTCCTTTCTGGACTGTAAGGAAGGTCAAGCCACACACATCCATTTaGACTCGTCAAACTCCACGG +
Preference number: 4 (lower is better)
Translates to: TKGISQGECPFWTVRKVKPHTSI*TRQTPR
Trigger: CCGTGGAGTTTGACGAGTTCAAATGGATGTGTGTGG...CTTGACCTTCCTTACAGTCCAGAAAGGACATTCTCCCTGAGAAATGCCCTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGTGGCCACGCGGAAGATaGAGCCATAGCACACCAGCA +
Preference number: 4 (lower is better)
Translates to: SHVVSGNAEAVDCRHYFQWPRGR*SHSTPA
Trigger: TGCTGGTGTGCTATGGCTTCATCTTCCGCGTGGCCA...CTGAAAATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GTTGTGAATGTATCTTGTGGTCCATCCAGAGACATGTCTAATCTGCAAGTATCTTTCCTCCCGGTCCTCTaGGCATCCTCCTCCACGATG +
Preference number: 4 (lower is better)
Translates to: VVNVSCGPSRDMSNLQVSFLPVL*ASSSTM
Trigger: CATCGTGGAGGAGGATGCTCAGAGGACCGGGAGGAA...AGATACTTGCAGATTAGACATGTCTCTGGATGGACCACAAGATACATTCACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GACTTGACTTTGCTAGTTATTAGAATCGGTATCCACAGGTCCTGCTCCCTAAATATTCCTCCTGCTGCCTaGAGAGGAGGTGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: DLTLLVIRIGIHRSCSLNIPPAA*RGGGGA
Trigger: AGCACCTCCACCTCCTCTTCAGGCAGCAGGAGGAAT...ATTTAGGGAGCAGGACCTGTGGATACCGATTCTAATAACTAGCAAAGTCAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACCCTCCCCAAATAAGTTaGTTTTGGCTTCGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: LGPKRSSHVVSGNAEAVDPPQIS*FWLRPQ
Trigger: TTGAGGCCGAAGCCAAAATCAACTTATTTGGGGAGG...GTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AGGCCAGCTATTTTCATTGGTCACTCAAACATCACACATAGAATCTATTTAATGAGCCCCACGGCACCCTaGGGCCCTCATCTCTGCTCG +
Preference number: 4 (lower is better)
Translates to: RPAIFIGHSNITHRIYLMSPTAP*GPHLCS
Trigger: CGAGCAGAGATGAGGGCCTCAGGGTGCCGTGGGGCT...CATTAAATAGATTCTATGTGTGATGTTTGAGTGACCAATGAAAATAGCTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CGTTTCAAAGCCAAGCTGCTGCACTCAAGAATGCCTACACCTAACCAGCAACCCGGTCAGAGCTGGAAATaGTCTTGGAGACCATTCAAT +
Preference number: 4 (lower is better)
Translates to: RFKAKLLHSRMPTPNQQPGQSWK*SWRPFN
Trigger: ATTGAATGGTCTCCAAGATCATTTCCAGCTCTGACC...GGGTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AGATTGTGCTCTAATGGACAGGGCAGACAAAGCCACAGAACCTTGATCTGCCTGCACTTCACATGTGCATaGGCAACCACACTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: RLCSNGQGRQSHRTLICLHFTCA*ATTLQS
Trigger: ACTTTGGAGTGTGGTTGCTCATGCACATGTGAAGTG...CAGGCAGATCAAGGTTCTGTGGCTTTGTCTGCCCTGTCCATTAGAGCACAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AGATTGTGCTCTAATGGACAGGGCAGACAAAGCCACAGAACCTTGATCTGCCTGAAAGCCACAGAACCTTaGTCTGCCTGCACTTCACAT +
Preference number: 4 (lower is better)
Translates to: RLCSNGQGRQSHRTLICLKATEP*SACTSH
Trigger: ATGTGAAGTGCAGGCAGATCAAGGTTCTGTGGCTTT...CAGGCAGATCAAGGTTCTGTGGCTTTGTCTGCCCTGTCCATTAGAGCACAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp ATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCTGTTCTGTGCACACTAGTTaGTCAGGAATATGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: INHVEAPGRSRVIRKKCCSVHTS*SGIWSL
Trigger: AAGGGACCATATTCCTGATCAACTAGTGTGCACAGA...ACAGCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTCAGTGGCAATACCTGTaGACCTGGATGGGGTCATGC +
Preference number: 4 (lower is better)
Translates to: EAHMWSLEMLKLWTVDIIQWQYL*TWMGSC
Trigger: GCATGACCCCATCCAGGTTCACAGGTATTGCCACTG...AATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp ATACAAAGGTCGGTCCGTGGGTCTGCTTTTGTGTTTTACCTATCTCTGCTTTACCAGTGGCAATACCTGTaGACCTGGATGGGGTCATGC +
Preference number: 4 (lower is better)
Translates to: IQRSVRGSAFVFYLSLLYQWQYL*TWMGSC
Trigger: GCATGACCCCATCCAGGTTCACAGGTATTGCCACTG...GTAAAGCAGAGATAGGTAAAACACAAAAGCAGACCCACGGACCGACCTTTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATGCCAGGGCTCAAGGCTaGACACATGTTGTGAATGTA +
Preference number: 4 (lower is better)
Translates to: AEAVDCRHYFQSLSWWLHARAQG*THVVNV
Trigger: TACATTCACAACATGTGTTCAGCCTTGAGCCCTGGC...ATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CCTGGTATCTGTGGCATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAAGACGACTCCTCTTGCTaGCATTTAGGTCAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: PGICGIAQGPNKAEISMKDDSSC*HLGQFQ
Trigger: CTGGAACTGACCTAAATGTCAGCAAGAGGAGTCGTC...TTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTATGCCACAGATACCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537209.5
CDS-3UTR GCA 90 bp AAGGGTAATTCACTTTCTAGAACAGCTGCCTCTCAGCAACCAGCAAGATCTCCTCAAAGATCCATTCCCTaGGGATGGAGCTCGTCACCA +
Preference number: 4 (lower is better)
Translates to: KGNSLSRTAASQQPARSPQRSIP*GWSSSP
Trigger: TGGTGACGAGCTCCATCCGCAGGGAATGGATCTTTG...AGGAGATCTTGCTGGTTGCTGAGAGGCAGCTGTTCTAGAAAGTGAATTACCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271357.9
ENST00000537209.5
CDS-3UTR GCA 90 bp AATCTACCTTCTGCCAACCAAAGCAGAGAAGTCCTGAACTTATTTAGTCATGATACAGTGCACCTTGCGTaGCTTGACCCTGGCCACGCG +
Preference number: 4 (lower is better)
Translates to: NLPSANQSREVLNLFSHDTVHLA*LDPGHA
Trigger: CGCGTGGCCAGGGTCAAGGCACGCAAGGTGCACTGT...ATCATGACTAAATAAGTTCAGGACTTCTCTGCTTTGGTTGGCAGAAGGTAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGACGACTGTGCCACAGTaGACCTTGCGTGCCTTGACC +
Preference number: 4 (lower is better)
Translates to: SHVVSGNAEAVDCRHYFQTTVPQ*TLRALT
Trigger: GGTCAAGGCACGCAAGGTGCACTGTGGCACAGTCGT...CTGAAAATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ATACAAAGGTCGGTCCGTGGGTCTGCTTTTGTGTTTTACCTATCTCTGCTTTACGAAAGGCATTCCTCCTaGTGCCTGAAGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: IQRSVRGSAFVFYLSLLYERHSS*CLKRRW
Trigger: CCACCTCCTCTTCAGGCAGCAGGAGGAATGCCTTTC...GTAAAGCAGAGATAGGTAAAACACAAAAGCAGACCCACGGACCGACCTTTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CCCAACCCACAAGGACAGTATGGCTCTGCTCCTTCTTATAGGCATATATGGCTAGGTCCCCAAAGCACATaGCCAGTAGTTCTTTGCGAA +
Preference number: 4 (lower is better)
Translates to: PNPQGQYGSAPSYRHIWLGPQST*PVVLCE
Trigger: TTCGCAAAGAACTACTGGGCATGTGCTTTGGGGACC...TAGCCATATATGCCTATAAGAAGGAGCAGAGCCATACTGTCCTTGTGGGTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGTGGCTGCATACCAGATaGTGCTCCTTCCCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: NAEAVDCRHYFQSLSWWLWLHTR*CSFPVC
Trigger: ACACACAGGGAAGGAGCAGCATCTGGTATGCAGCCA...CAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGGTCATTAGGAAGAAGTaGTGTGTCATCCTTCACAGT +
Preference number: 4 (lower is better)
Translates to: KKCCVILHSTLGRVLLLRVIRKK*CVILHS
Trigger: ACTGTGAAGGATGACACAGCACTTCTTCCTAATGAC...CCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATCCTGGGTGCTTTCTCTaGGGACCAGTCCTAGAACTG +
Preference number: 4 (lower is better)
Translates to: RSSHVVSGNAEAVDCRHYPGCFL*GPVLEL
Trigger: CAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCAGG...ATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTCCTGGGTGCTTTCTCTaGGGACCAGTCCTAGAACTG +
Preference number: 4 (lower is better)
Translates to: EAHMWSLEMLKLWTVDIIPGCFL*GPVLEL
Trigger: CAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCAGG...AATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AATCTACCTTCTGCCAACCAAAGCAGAGAAGTCCTGAACTTATTTAGTCATGATCAGGGTGGGCCAGTCTaGAAGAGGCCTGTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: NLPSANQSREVLNLFSHDQGGPV*KRPVAV
Trigger: GACAGCCACAGGCCTCTTGCAGACTGGCCCACCCTG...ATCATGACTAAATAAGTTCAGGACTTCTCTGCTTTGGTTGGCAGAAGGTAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTCTATTTCCTGGCTGTaGTTGGCACTACAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: LGPKRSSHVVSGNAEAVDSISWL*LALQSH
Trigger: ATGGGACTGTAGTGCCAAGCACAGCCAGGAAATAGA...GTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AAGGGTAATTCACTTTCTAGAACAGCTGCCTCTCAGCAACCAGCAAGATCTCCTTTGCTCTTGGGAGTGTaGCATGCAGAACTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: KGNSLSRTAASQQPARSPLLLGV*HAELRP
Trigger: TGGCCTCAGTTCTGCATGGCACACTCCCAAGAGCAA...AGGAGATCTTGCTGGTTGCTGAGAGGCAGCTGTTCTAGAAAGTGAATTACCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACGTCTTAGGACCAAACTTCAACTaGTGTTCCAGCACAAAGGGA +
Preference number: 4 (lower is better)
Translates to: AVLGTTVPFSPVKQWYVLGPNFN*CSSTKG
Trigger: TCCCTTTGTGCTGGAACAGCAGTTGAAGTTTGGTCC...TAAGACGTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GACTTGACTTTGCTAGTTATTAGAATCGGTATCCACAGGTCCTGCTCCCTAAATGCAGAGTGTCTGACCTaGACAGGTGAACCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: DLTLLVIRIGIHRSCSLNAECLT*TGEPAL
Trigger: GAGGGCAGGTTCACCTGTGCAGGTCAGACACTCTGC...ATTTAGGGAGCAGGACCTGTGGATACCGATTCTAATAACTAGCAAAGTCAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGGCAGAGTGTCTGACCTaGACAGGTGAACCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: SHVVSGNAEAVDCRHYFQAECLT*TGEPAL
Trigger: GAGGGCAGGTTCACCTGTGCAGGTCAGACACTCTGC...CTGAAAATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACGTCTTACCTGTTCCACCTCTGTaGACACTAGTTGATCAGGAA +
Preference number: 4 (lower is better)
Translates to: AVLGTTVPFSPVKQWYVLPVPPL*TLVDQE
Trigger: TTCCTGATCAACTAGTGTGCACAGAGGTGGAACAGG...TAAGACGTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGCTGCACTCAAGAATaGCTACACCTAACCAGCAAC +
Preference number: 4 (lower is better)
Translates to: LGPKRSSHVVSGNAEAVDCCTQE*LHLTSN
Trigger: GTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCA...GTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AAGGGTAATTCACTTTCTAGAACAGCTGCCTCTCAGCAACCAGCAAGATCTCCTCAGAGCCTAGCCTGGTaGTTCGCATACACTGGATGT +
Preference number: 4 (lower is better)
Translates to: KGNSLSRTAASQQPARSPQSLAW*FAYTGC
Trigger: ACATCCAGTGTATGCGAAGCACCAGGCTAGGCTCTG...AGGAGATCTTGCTGGTTGCTGAGAGGCAGCTGTTCTAGAAAGTGAATTACCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATGGGGTTTCGACCTTCTaGACTAACGGCAGATATCCT +
Preference number: 4 (lower is better)
Translates to: AEAVDCRHYFQSLSWWLHGVSTF*TNGRYP
Trigger: AGGATATCTGCCGTTAGTGCAGAAGGTCGAAACCCC...ATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CCCAACCCACAAGGACAGTATGGCTCTGCTCCTTCTTATAGGCATATATGGCTAGGGGTTTCGACCTTCTaGACTAACGGCAGATATCCT +
Preference number: 4 (lower is better)
Translates to: PNPQGQYGSAPSYRHIWLGVSTF*TNGRYP
Trigger: AGGATATCTGCCGTTAGTGCAGAAGGTCGAAACCCC...TAGCCATATATGCCTATAAGAAGGAGCAGAGCCATACTGTCCTTGTGGGTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGAATTCAAAACAAGAGTaGCCAGCCAGAGGCAAACAA +
Preference number: 4 (lower is better)
Translates to: KKCCVILHSTLGRVLLLRNSKQE*PARGKQ
Trigger: TTGTTTGCCTCTGGCTGGGCACTCTTGTTTTGAATT...CCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CCTGGTATCTGTGGCATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAACACATGCCAGCTCACTaGCTCCTCTTTATAGCCACA +
Preference number: 4 (lower is better)
Translates to: PGICGIAQGPNKAEISMKHMPAH*LLFIAT
Trigger: TGTGGCTATAAAGAGGAGGCAGTGAGCTGGCATGTG...TTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTATGCCACAGATACCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATACTGCTCTCTATTGCCTaGTCTTCCTCACCACATCCC +
Preference number: 4 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCILLSIA*SSSPHP
Trigger: GGGATGTGGTGAGGAAGAGCAGGCAATAGAGAGCAG...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TTCCTGGCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACTTCTCAAGTTCCAGATaGTACTTAGCCTTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: FLAVLGTTVPFSPVKQWYFSSSR*YLAFPP
Trigger: GGGAGGAAAGGCTAAGTAGCATCTGGAACTTGAGAA...GTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGCCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CCTGGTATCTGTGGCATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAAGCAGGTTCCTTCTACTaGTCTCAGTGTGGTCTTGTC +
Preference number: 4 (lower is better)
Translates to: PGICGIAQGPNKAEISMKAGSFY*SQCGLV
Trigger: GACAAGACCACACTGAGAGCAGTAGAAGGAACCTGC...TTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTATGCCACAGATACCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATACCTTTGTCCAAAGGTTaGACGGGGGTTAAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCIPLSKG*TGVKLG
Trigger: GCCAAGCTTAACCCCCGTGCAACCTTTGGACAAAGG...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367836.5
CDS-3UTR CCA 90 bp TCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGGGGCTTTGCACTGGTTaGCCGAGTAGACCACACCCT +
Preference number: 4 (lower is better)
Translates to: SHVVSGNAEAVDCRHYFQGLCTG*PSRPHP
Trigger: AGGGTGTGGTCTACTCGGCCAACCAGTGCAAAGCCC...CTGAAAATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GACTTGACTTTGCTAGTTATTAGAATCGGTATCCACAGGTCCTGCTCCCTAAATGCTCCTTCTCTTGGGTaGGCAAGTGCAGTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: DLTLLVIRIGIHRSCSLNAPSLG*ASAVRG
Trigger: CCCTCTCACTGCACTTGCCCACCCAAGAGAAGGAGC...ATTTAGGGAGCAGGACCTGTGGATACCGATTCTAATAACTAGCAAAGTCAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GGGAATATATATAGAAAACGTGAACCACACGCAGACGTAGGAATGCCATCCAGTCGGCCTCAATGGCTTTaGCCAAGCTTGCTGCGTAAC +
Preference number: 4 (lower is better)
Translates to: GNIYRKREPHADVGMPSSRPQWL*PSLLRN
Trigger: GTTACGCAGCAAGCTTGGCCAAAGCCATTGAGGCCG...ACTGGATGGCATTCCTACGTCTGCGTGTGGTTCACGTTTTCTATATATATTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATCAGTCCTTGTCCTGGTaGCTGCATACCAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: RSSHVVSGNAEAVDCRHYQSLSW*LHTRCC
Trigger: GCAGCATCTGGTATGCAGCCACCAGGACAAGGACTG...ATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTTTTCAGTCCTTGTCCTaGTGGCTGCATACCAGATGC +
Preference number: 4 (lower is better)
Translates to: GPKRSSHVVSGNAEAVDCFQSLS*WLHTRC
Trigger: GCATCTGGTATGCAGCCACCAGGACAAGGACTGAAA...ACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GGAGGAAATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCGAAATGCTGAAGCTGTaGACTGTAGACATTATTTTC +
Preference number: 4 (lower is better)
Translates to: GGNDACGGLLPSPSSLVLEMLKL*TVDIIF
Trigger: GAAAATAATGTCTACAGTCCACAGCTTCAGCATTTC...GAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCATTTCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGTCTGCAAGAGGCCTGTaGCTGTCCCTATTAGCACCA +
Preference number: 4 (lower is better)
Translates to: NAEAVDCRHYFQSLSWWLSARGL*LSLLAP
Trigger: TGGTGCTAATAGGGACAGCCACAGGCCTCTTGCAGA...CAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGCCAGGTTGCTGGCTGTaGGTCCAGGGCTGCTTCTAT +
Preference number: 4 (lower is better)
Translates to: SHVVSGNAEAVDCRHYFQPGCWL*VQGCFY
Trigger: ATAGAAGCAGCCCTGGACCCACAGCCAGCAACCTGG...CTGAAAATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATACCTGTGAACCTGGATaGGGTCATGCATGTAAGCAG +
Preference number: 4 (lower is better)
Translates to: AEAVDCRHYFQSLSWWLHTCEPG*GHACKQ
Trigger: CTGCTTACATGCATGACCCCATCCAGGTTCACAGGT...ATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCATCAATCTTATAGGCATATATaGCTAATCACAGCCATTCTC +
Preference number: 4 (lower is better)
Translates to: CFLCGPVLELRVPHCPHQSYRHI*LITAIL
Trigger: GAGAATGGCTGTGATTAGCCATATATGCCTATAAGA...TTGATGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATACTCAGACAATTGCCCTaGATTCTGTGTCCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCILRQLP*ILCPLS
Trigger: GGAGAGGGGACACAGAATCCAGGGCAATTGTCTGAG...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTACACTGAAAAAGACCTaGTCCTCACGGATTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GPKRSSHVVSGNAEAVDCTLKKT*SSRIPA
Trigger: GGCTGGAATCCGTGAGGACCAGGTCTTTTTCAGTGT...ACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367838.5
CDS-3UTR TCA 90 bp TCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGCACCCTCCTCCTCAGTaGGATTACTCAGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SHVVSGNAEAVDCRHYFQHPPPQ*DYSAPS
Trigger: GGAAGGAGCTGAGTAATCTCACTGAGGAGGAGGGTG...CTGAAAATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367838.5
ENST00000537209.5
CDS-3UTR TCA 90 bp AAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTGGTTTCTCCCTTTTGGTCAAACTCCACGGATaGCCAACCAAACAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: KHLVPALPLVFYSGFSLLVKLHG*PTKQGW
Trigger: CCACCCCTGTTTGGTTGGTCATCCGTGGAGTTTGAC...CAAAAGGGAGAAACCACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATACCACACACATCCATTTaGACTCGTCAAACTCCACGG +
Preference number: 4 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCIPHTSI*TRQTPR
Trigger: CCGTGGAGTTTGACGAGTTCAAATGGATGTGTGTGG...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGTCCTGTTGGAAATGCTaGAGAGCCTGGAAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: NAEAVDCRHYFQSLSWWLSCWKC*RAWKSS
Trigger: AGAGGACTTCCAGGCTCTTCAGCATTTCCAACAGGA...CAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTCCTCCCCAAATAAGTTaGTTTTGGCTTCGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: GPKRSSHVVSGNAEAVDCPPQIS*FWLRPQ
Trigger: TTGAGGCCGAAGCCAAAATCAACTTATTTGGGGAGG...ACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TTAATTCTGGAAATGAAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTGCCAGCTGTACACAGTaGCATGCTCCCAAGGCCGCG +
Preference number: 4 (lower is better)
Translates to: LILEMKHLVPALPLVFYSASCTQ*HAPKAA
Trigger: CGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGC...ACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTTCATTTCCAGAATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CATCACTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGTGCCATGCAGAACTaGGGCCAGCTATTTTCATTG +
Preference number: 4 (lower is better)
Translates to: HHWDLKEAHMWSLEMLKLCAMQN*GQLFSL
Trigger: CAATGAAAATAGCTGGCCTCAGTTCTGCATGGCACA...CAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AGATTGTGCTCTAATGGACAGGGCAGACAAAGCCACAGAACCTTGATCTGCCTGTCTGTGCACACTAGTTaGTCAGGAATATGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: RLCSNGQGRQSHRTLICLSVHTS*SGIWSL
Trigger: AAGGGACCATATTCCTGATCAACTAGTGTGCACAGA...CAGGCAGATCAAGGTTCTGTGGCTTTGTCTGCCCTGTCCATTAGAGCACAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AGATTGTGCTCTAATGGACAGGGCAGACAAAGCCACAGAACCTTGATCTGCCTGCAGGCCCTGGGGATTTaGTCATCTTTGATAGTCATT +
Preference number: 4 (lower is better)
Translates to: RLCSNGQGRQSHRTLICLQALGI*SSLIVI
Trigger: AATGACTATCAAAGATGATCAAATCCCCAGGGCCTG...CAGGCAGATCAAGGTTCTGTGGCTTTGTCTGCCCTGTCCATTAGAGCACAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AGTCACCCTGTGACGGAGGACTCCCTCAATCCTGTGTGTCTCCACATTGAAACAGCTGTATTTGTGCTATaGTTTGGAACGTTACACCAG +
Preference number: 4 (lower is better)
Translates to: SHPVTEDSLNPVCLHIETAVFVL*FGTLHQ
Trigger: CTGGTGTAACGTTCCAAATCATAGCACAAATACAGC...TGTTTCAATGTGGAGACACACAGGATTGAGGGAGTCCTCCGTCACAGGGTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GGCCGTGGACTACACGATAAGGGCAAAGGAATTCAAAACAAGAGTGCCCAGCCAATACCTCATCTTCCTTaGCCTATAAGACTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GRGLHDKGKGIQNKSAQPIPHLP*PIRLAP
Trigger: AGGAGCTAGTCTTATAGGTCAAGGAAGATGAGGTAT...TGGCTGGGCACTCTTGTTTTGAATTCCTTTGCCCTTATCGTGTAGTCCACGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp ATACAAAGGTCGGTCCGTGGGTCTGCTTTTGTGTTTTACCTATCTCTGCTTTACTTCCTCTGGGAGGACTaGCTCACCTGTGATTTGTGG +
Preference number: 4 (lower is better)
Translates to: IQRSVRGSAFVFYLSLLYFLWED*LTCDLW
Trigger: CCACAAATCACAGGTGAGTCAGTCCTCCCAGAGGAA...GTAAAGCAGAGATAGGTAAAACACAAAAGCAGACCCACGGACCGACCTTTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ATACAAAGGTCGGTCCGTGGGTCTGCTTTTGTGTTTTACCTATCTCTGCTTTACTTCACACTGCTGCCCTaGACTCCCTCGGAACCAAAA +
Preference number: 4 (lower is better)
Translates to: IQRSVRGSAFVFYLSLLYFTLLP*TPSEPK
Trigger: TTTTGGTTCCGAGGGAGTGCAGGGCAGCAGTGTGAA...GTAAAGCAGAGATAGGTAAAACACAAAAGCAGACCCACGGACCGACCTTTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTTCACACTGCTGCCCTaGACTCCCTCGGAACCAAAA +
Preference number: 4 (lower is better)
Translates to: EAHMWSLEMLKLWTVDIIFTLLP*TPSEPK
Trigger: TTTTGGTTCCGAGGGAGTGCAGGGCAGCAGTGTGAA...AATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000537209.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GGGAATATATATAGAAAACGTGAACCACACGCAGACGTAGGAATGCCATCCAGTTTCACACTGCTGCCCTaGACTCCCTCGGAACCAAAA +
Preference number: 4 (lower is better)
Translates to: GNIYRKREPHADVGMPSSFTLLP*TPSEPK
Trigger: TTTTGGTTCCGAGGGAGTGCAGGGCAGCAGTGTGAA...ACTGGATGGCATTCCTACGTCTGCGTGTGGTTCACGTTTTCTATATATATTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATTTTGGCCAAGCTTGCTaGGTAACTGTCCAAGGACTT +
Preference number: 4 (lower is better)
Translates to: AEAVDCRHYFQSLSWWLHFGQAC*VTVQGL
Trigger: AAGTCCTTGGACAGTTACGCAGCAAGCTTGGCCAAA...ATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTTTTGGCCAAGCTTGCTaGGTAACTGTCCAAGGACTT +
Preference number: 4 (lower is better)
Translates to: GPKRSSHVVSGNAEAVDCFGQAC*VTVQGL
Trigger: AAGTCCTTGGACAGTTACGCAGCAAGCTTGGCCAAA...ACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTAAACTTCCCTTCACAGATGAGGAAACTCATAAGTAGTGACTTGTTTGAAAACTCACAAGAGTTCTGCTaGCTCGGCGGCCCCCGAAGC +
Preference number: 4 (lower is better)
Translates to: LNFPSQMRKLISSDLFENSQEFC*LGGPRS
Trigger: GCTTCGGGGGCCGCCGAGGCAGCAGAACTCTTGTGA...GTTTTCAAACAAGTCACTACTTATGAGTTTCCTCATCTGTGAAGGGAAGTTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATACATCTCCTTCTTCGATaGTCTGCAACTGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCIHLLLR*SATAAS
Trigger: AGAGGCTGCAGTTGCAGAGCATCGAAGAAGGAGATG...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCTGTGTCATTAGGAAGAAGTaGTGTGTCATCCTTCACAGT +
Preference number: 4 (lower is better)
Translates to: INHVEAPGRSRVIRKKCCVIRKK*CVILHS
Trigger: ACTGTGAAGGATGACACAGCACTTCTTCCTAATGAC...ACAGCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTGGTTTCTCCCTTTTGCCTGGGTGCTTTCTCTaGGGACCAGTCCTAGAACTG +
Preference number: 4 (lower is better)
Translates to: KHLVPALPLVFYSGFSLLPGCFL*GPVLEL
Trigger: CAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCAGG...CAAAAGGGAGAAACCACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AATCTACCTTCTGCCAACCAAAGCAGAGAAGTCCTGAACTTATTTAGTCATGATCGCTCCGAAGCGCTCTaGTCCTGGGTGCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: NLPSANQSREVLNLFSHDRSEAL*SWVLSL
Trigger: CAGAGAAAGCACCCAGGAGCAGAGCGCTTCGGAGCG...ATCATGACTAAATAAGTTCAGGACTTCTCTGCTTTGGTTGGCAGAAGGTAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ATACAAAGGTCGGTCCGTGGGTCTGCTTTTGTGTTTTACCTATCTCTGCTTTACTTGCTCTTGGGAGTGTaGCATGCAGAACTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: IQRSVRGSAFVFYLSLLYLLLGV*HAELRP
Trigger: TGGCCTCAGTTCTGCATGGCACACTCCCAAGAGCAA...GTAAAGCAGAGATAGGTAAAACACAAAAGCAGACCCACGGACCGACCTTTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TTCCTGGCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACGATAATAGTAACTGTTaGTCTTGGGAGTGTGCCATG +
Preference number: 4 (lower is better)
Translates to: FLAVLGTTVPFSPVKQWYDNSNC*SWECAM
Trigger: CATGGCACACTCCCAAGAGCAACAGTTACTATTATC...GTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGCCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAAGAGGCAGAGGTGGGCGATAATAGTAACTGTTaGTCTTGGGAGTGTGCCATG +
Preference number: 4 (lower is better)
Translates to: IAQGPNKAEISMKEAEVGDNSNC*SWECAM
Trigger: CATGGCACACTCCCAAGAGCAACAGTTACTATTATC...GCCCACCTCTGCCTCTTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AGATTGTGCTCTAATGGACAGGGCAGACAAAGCCACAGAACCTTGATCTGCCTGCTGTGGGTCCAGGGCTaGTTCTATCTTATTTATACC +
Preference number: 4 (lower is better)
Translates to: RLCSNGQGRQSHRTLICLLWVQG*FYLIYT
Trigger: GGTATAAATAAGATAGAAGCAGCCCTGGACCCACAG...CAGGCAGATCAAGGTTCTGTGGCTTTGTCTGCCCTGTCCATTAGAGCACAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AGATTGTGCTCTAATGGACAGGGCAGACAAAGCCACAGAACCTTGATCTGCCTGTGTCCAAATGACATGTaGACACAAAGACAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RLCSNGQGRQSHRTLICLCPNDM*TQRQSW
Trigger: CCAGCTCTGTCTTTGTGTGCACATGTCATTTGGACA...CAGGCAGATCAAGGTTCTGTGGCTTTGTCTGCCCTGTCCATTAGAGCACAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CATCACTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGGTCGGTCCGTGGGTCTaGTTTTGTGTTTTACCTATC +
Preference number: 4 (lower is better)
Translates to: HHWDLKEAHMWSLEMLKLVGPWV*FCVLPI
Trigger: GATAGGTAAAACACAAAAGCAGACCCACGGACCGAC...CAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CCTGGTATCTGTGGCATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAAGGACCAAACTTCAACTaGTGTTCCAGCACAAAGGGA +
Preference number: 4 (lower is better)
Translates to: PGICGIAQGPNKAEISMKGPNFN*CSSTKG
Trigger: TCCCTTTGTGCTGGAACAGCAGTTGAAGTTTGGTCC...TTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTATGCCACAGATACCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CCCAACCCACAAGGACAGTATGGCTCTGCTCCTTCTTATAGGCATATATGGCTAACATTCTCCAACCCTTaGGTTTCAAAGCCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: PNPQGQYGSAPSYRHIWLTFSNP*VSKPSC
Trigger: GCAGCTTGGCTTTGAAACGCAAGGGTTGGAGAATGT...TAGCCATATATGCCTATAAGAAGGAGCAGAGCCATACTGTCCTTGTGGGTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CATGACTTAACCATACCCACGTCTTCACCATCCTCACTATATCACACTTGCACTCAGAGCCTAGCCTGGTaGTTCGCATACACTGGATGT +
Preference number: 4 (lower is better)
Translates to: HDLTIPTSSPSSLYHTCTQSLAW*FAYTGC
Trigger: ACATCCAGTGTATGCGAAGCACCAGGCTAGGCTCTG...AGTGCAAGTGTGATATAGTGAGGATGGTGAAGACGTGGGTATGGTTAAGTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATAGGTATCCACAGGTCCTaGTCCCTAAATCAGAGTGCA +
Preference number: 4 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCIGIHRS*SLNQSA
Trigger: TGCACTCTGATTTAGGGAGCAGGACCTGTGGATACC...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AAGGGTAATTCACTTTCTAGAACAGCTGCCTCTCAGCAACCAGCAAGATCTCCTGGTATCCACAGGTCCTaGTCCCTAAATCAGAGTGCA +
Preference number: 4 (lower is better)
Translates to: KGNSLSRTAASQQPARSPGIHRS*SLNQSA
Trigger: TGCACTCTGATTTAGGGAGCAGGACCTGTGGATACC...AGGAGATCTTGCTGGTTGCTGAGAGGCAGCTGTTCTAGAAAGTGAATTACCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GGGAATATATATAGAAAACGTGAACCACACGCAGACGTAGGAATGCCATCCAGTGAACTTCAGTCTTGGTaGCTCTGGCCAGGGAAATGG +
Preference number: 4 (lower is better)
Translates to: GNIYRKREPHADVGMPSSELQSW*LWPGKW
Trigger: CCATTTCCCTGGCCAGAGGCACCAAGACTGAAGTTC...ACTGGATGGCATTCCTACGTCTGCGTGTGGTTCACGTTTTCTATATATATTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGCAGAAGGCAGTCACATaGCAGCTCACTGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SHVVSGNAEAVDCRHYFQQKAVT*QLTASS
Trigger: AGAGGAGGCAGTGAGCTGGCATGTGACTGCCTTCTG...CTGAAAATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GGCCGTGGACTACACGATAAGGGCAAAGGAATTCAAAACAAGAGTGCCCAGCCAAGGCATTGTGCTGCATaGTTTCCAAGTATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: GRGLHDKGKGIQNKSAQPRHCAA*FPSISS
Trigger: TGAGGAAATACTTGGAAAGCATGCAGCACAATGCCT...TGGCTGGGCACTCTTGTTTTGAATTCCTTTGCCCTTATCGTGTAGTCCACGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ATACAAAGGTCGGTCCGTGGGTCTGCTTTTGTGTTTTACCTATCTCTGCTTTACCTGCTCTCTATTGCCTaGTCTTCCTCACCACATCCC +
Preference number: 4 (lower is better)
Translates to: IQRSVRGSAFVFYLSLLYLLSIA*SSSPHP
Trigger: GGGATGTGGTGAGGAAGAGCAGGCAATAGAGAGCAG...GTAAAGCAGAGATAGGTAAAACACAAAAGCAGACCCACGGACCGACCTTTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AGATTGTGCTCTAATGGACAGGGCAGACAAAGCCACAGAACCTTGATCTGCCTGTTCTCAAGTTCCAGATaGTACTTAGCCTTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: RLCSNGQGRQSHRTLICLFSSSR*YLAFPP
Trigger: GGGAGGAAAGGCTAAGTAGCATCTGGAACTTGAGAA...CAGGCAGATCAAGGTTCTGTGGCTTTGTCTGCCCTGTCCATTAGAGCACAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AGATTGTGCTCTAATGGACAGGGCAGACAAAGCCACAGAACCTTGATCTGCCTGATAAGACTAGCTCCTTaGTTTTCTCATCCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: RLCSNGQGRQSHRTLICLIRLAP*FSHPLG
Trigger: GCCAAGGGGATGAGAAAAGCAAGGAGCTAGTCTTAT...CAGGCAGATCAAGGTTCTGTGGCTTTGTCTGCCCTGTCCATTAGAGCACAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTGGTTTCTCCCTTTTGCAGTGTGGTCTTGTCTaGCAGGCCTGTGATTCTCCC +
Preference number: 4 (lower is better)
Translates to: KHLVPALPLVFYSGFSLLQCGLV*QACDSP
Trigger: GGGAGAATCACAGGCCTGGCAGACAAGACCACACTG...CAAAAGGGAGAAACCACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATAGCAGGTTCCTTCTACTaGTCTCAGTGTGGTCTTGTC +
Preference number: 4 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCIAGSFY*SQCGLV
Trigger: GACAAGACCACACTGAGAGCAGTAGAAGGAACCTGC...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AGGCCAGCTATTTTCATTGGTCACTCAAACATCACACATAGAATCTATTTAATGGCCAGCCCCGGGGAGTaGGGAGTGGACGTAAACAGG +
Preference number: 4 (lower is better)
Translates to: RPAIFIGHSNITHRIYLMASPGE*GVDVNR
Trigger: CCTGTTTACGTCCACTCCCCACTCCCCGGGGCTGGC...CATTAAATAGATTCTATGTGTGATGTTTGAGTGACCAATGAAAATAGCTGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATATGATGGCGATGAACTaGGTGATGATGACGCCCCCT +
Preference number: 4 (lower is better)
Translates to: RSSHVVSGNAEAVDCRHYMMAMN*VMMTPP
Trigger: AGGGGGCGTCATCATCACCCAGTTCATCGCCATCAT...ATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367838.5
ENST00000537209.5
CDS-3UTR CCA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATATCATGGGGTACACCATaGGGTACAGGACAGCATAGT +
Preference number: 4 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCISWGTP*GTGQHS
Trigger: ACTATGCTGTCCTGTACCCCATGGTGTACCCCATGA...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CATCACTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGCTGTCGTTGCACAAATaGTTCCCGATAATACCGGTC +
Preference number: 4 (lower is better)
Translates to: HHWDLKEAHMWSLEMLKLLSLHK*FPIIPV
Trigger: GACCGGTATTATCGGGAACCATTTGTGCAACGACAG...CAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGTGGCTTCGGCCTCAATaGCTTTGGCCAAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: SHVVSGNAEAVDCRHYFQWLRPQ*LWPSLL
Trigger: CAGCAAGCTTGGCCAAAGCCATTGAGGCCGAAGCCA...CTGAAAATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTGTAACCAAGACCCCTaGCAAAGCCTCCTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: EAHMWSLEMLKLWTVDIICNQDP*QSLLPK
Trigger: TTTGGGGAGGAGGCTTTGCCAGGGGTCTTGGTTACA...AATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GGGAATATATATAGAAAACGTGAACCACACGCAGACGTAGGAATGCCATCCAGTTGTAACCAAGACCCCTaGCAAAGCCTCCTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: GNIYRKREPHADVGMPSSCNQDP*QSLLPK
Trigger: TTTGGGGAGGAGGCTTTGCCAGGGGTCTTGGTTACA...ACTGGATGGCATTCCTACGTCTGCGTGTGGTTCACGTTTTCTATATATATTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTGCAACTGCAGCCTCTaGCTCACAAGAGTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: EAHMWSLEMLKLWTVDIICNCSL*LTRVLL
Trigger: CAGCAGAACTCTTGTGAGCCAGAGGCTGCAGTTGCA...AATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AAGGGTAATTCACTTTCTAGAACAGCTGCCTCTCAGCAACCAGCAAGATCTCCTTTTCCTGGCTGTGCTTaGCACTACAGTCCCATTCAG +
Preference number: 4 (lower is better)
Translates to: KGNSLSRTAASQQPARSPFPGCA*HYSPIQ
Trigger: CTGAATGGGACTGTAGTGCCAAGCACAGCCAGGAAA...AGGAGATCTTGCTGGTTGCTGAGAGGCAGCTGTTCTAGAAAGTGAATTACCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACAGTTTCTCTATTTCCTaGCTGTGCTTGGCACTACAG +
Preference number: 4 (lower is better)
Translates to: LGPKRSSHVVSGNAEAVDSFSIS*LCLALQ
Trigger: CTGTAGTGCCAAGCACAGCCAGGAAATAGAGAAACT...GTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CCCAACCCACAAGGACAGTATGGCTCTGCTCCTTCTTATAGGCATATATGGCTAAGTAACTGTTGCTCTTaGGAGTGTGCCATGCAGAAC +
Preference number: 4 (lower is better)
Translates to: PNPQGQYGSAPSYRHIWLSNCCS*ECAMQN
Trigger: GTTCTGCATGGCACACTCCCAAGAGCAACAGTTACT...TAGCCATATATGCCTATAAGAAGGAGCAGAGCCATACTGTCCTTGTGGGTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp ACCAAGGGCATTTCTCAGGGAGAATGTCCTTTCTGGACTGTAAGGAAGGTCAAGGGACCAGCTAACCATTaGTTTCTGCCACACAACACA +
Preference number: 4 (lower is better)
Translates to: TKGISQGECPFWTVRKVKGPANH*FLPHNT
Trigger: TGTGTTGTGTGGCAGAAACCAATGGTTAGCTGGTCC...CTTGACCTTCCTTACAGTCCAGAAAGGACATTCTCCCTGAGAAATGCCCTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GACTTGACTTTGCTAGTTATTAGAATCGGTATCCACAGGTCCTGCTCCCTAAATCAGTCTTGGTGCCTCTaGCCAGGGAAATGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: DLTLLVIRIGIHRSCSLNQSWCL*PGKWLC
Trigger: ACACAGCCATTTCCCTGGCCAGAGGCACCAAGACTG...ATTTAGGGAGCAGGACCTGTGGATACCGATTCTAATAACTAGCAAAGTCAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGCAGTCTTGGTGCCTCTaGCCAGGGAAATGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SHVVSGNAEAVDCRHYFQQSWCL*PGKWLC
Trigger: ACACAGCCATTTCCCTGGCCAGAGGCACCAAGACTG...CTGAAAATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp ATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAAGAGGCAGAGGTGGGCATTTGTGCTATGATTTaGAACGTTACACCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: IAQGPNKAEISMKEAEVGICAMI*NVTPGP
Trigger: AGGGCCTGGTGTAACGTTCCAAATCATAGCACAAAT...GCCCACCTCTGCCTCTTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGTGCCTCTTAGGGGCTTaGAGGATTAGGGATTCTGTG +
Preference number: 4 (lower is better)
Translates to: NAEAVDCRHYFQSLSWWLCLLGA*RIRDSV
Trigger: CACAGAATCCCTAATCCTCCAAGCCCCTAAGAGGCA...CAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CTAAACTTCCCTTCACAGATGAGGAAACTCATAAGTAGTGACTTGTTTGAAAACTTCCTCCCGGTCCTCTaGGCATCCTCCTCCACGATG +
Preference number: 4 (lower is better)
Translates to: LNFPSQMRKLISSDLFENFLPVL*ASSSTM
Trigger: CATCGTGGAGGAGGATGCTCAGAGGACCGGGAGGAA...GTTTTCAAACAAGTCACTACTTATGAGTTTCCTCATCTGTGAAGGGAAGTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTCCTGTTGGAAATGCTaGAGAGCCTGGAAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: EAHMWSLEMLKLWTVDIISCWKC*RAWKSS
Trigger: AGAGGACTTCCAGGCTCTTCAGCATTTCCAACAGGA...AATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATACTCCCAGCACACTGTaGAGAGGAGGAAATGATGCA +
Preference number: 4 (lower is better)
Translates to: RSSHVVSGNAEAVDCRHYTPSTL*RGGNDA
Trigger: TGCATCATTTCCTCCTCTTCACAGTGTGCTGGGAGT...ATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AAGGGTAATTCACTTTCTAGAACAGCTGCCTCTCAGCAACCAGCAAGATCTCCTTGTGCCATGCAGAACTaGGGCCAGCTATTTTCATTG +
Preference number: 4 (lower is better)
Translates to: KGNSLSRTAASQQPARSPCAMQN*GQLFSL
Trigger: CAATGAAAATAGCTGGCCTCAGTTCTGCATGGCACA...AGGAGATCTTGCTGGTTGCTGAGAGGCAGCTGTTCTAGAAAGTGAATTACCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp ACCAAGGGCATTTCTCAGGGAGAATGTCCTTTCTGGACTGTAAGGAAGGTCAAGGAGGACCTAGAAAGGTaGCAAGATGTCCAAATGACA +
Preference number: 4 (lower is better)
Translates to: TKGISQGECPFWTVRKVKEDLER*QDVQMT
Trigger: TGTCATTTGGACATCTTGTCACCTTTCTAGGTCCTC...CTTGACCTTCCTTACAGTCCAGAAAGGACATTCTCCCTGAGAAATGCCCTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATGGTCAGAGCTGGAAATaGTCTTGGAGACCATTCAAT +
Preference number: 4 (lower is better)
Translates to: AEAVDCRHYFQSLSWWLHGQSWK*SWRPFN
Trigger: ATTGAATGGTCTCCAAGATCATTTCCAGCTCTGACC...ATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATCTGCTTTACAAATCCTaGGAACACCAAAGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: AEAVDCRHYFQSLSWWLHLLYKS*EHQRSE
Trigger: CTCTGACCTTTGGTGTTCTCAGGATTTGTAAAGCAG...ATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GTTGTGAATGTATCTTGTGGTCCATCCAGAGACATGTCTAATCTGCAAGTATCTCGCCTGGCATCCAGGTaGCCCAGAATAGTTGAGTTC +
Preference number: 4 (lower is better)
Translates to: VVNVSCGPSRDMSNLQVSRLASR*PRIVEF
Trigger: GAACTCAACTATTCTGGGTCACCTGGATGCCAGGCG...AGATACTTGCAGATTAGACATGTCTCTGGATGGACCACAAGATACATTCACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp ACCAAGGGCATTTCTCAGGGAGAATGTCCTTTCTGGACTGTAAGGAAGGTCAAGTCTGTGCACACTAGTTaGTCAGGAATATGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: TKGISQGECPFWTVRKVKSVHTS*SGIWSL
Trigger: AAGGGACCATATTCCTGATCAACTAGTGTGCACAGA...CTTGACCTTCCTTACAGTCCAGAAAGGACATTCTCCCTGAGAAATGCCCTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATGCCAGGGCTCAAGGCTaGACACATGTTGTGAATGTA +
Preference number: 4 (lower is better)
Translates to: RSSHVVSGNAEAVDCRHYARAQG*THVVNV
Trigger: TACATTCACAACATGTGTTCAGCCTTGAGCCCTGGC...ATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CCCAACCCACAAGGACAGTATGGCTCTGCTCCTTCTTATAGGCATATATGGCTACAGGCCCTGGGGATTTaGTCATCTTTGATAGTCATT +
Preference number: 4 (lower is better)
Translates to: PNPQGQYGSAPSYRHIWLQALGI*SSLIVI
Trigger: AATGACTATCAAAGATGATCAAATCCCCAGGGCCTG...TAGCCATATATGCCTATAAGAAGGAGCAGAGCCATACTGTCCTTGTGGGTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp ACCAAGGGCATTTCTCAGGGAGAATGTCCTTTCTGGACTGTAAGGAAGGTCAAGTGGCTTAACTTACTTTaGGACCTCAGACAATTGCCC +
Preference number: 4 (lower is better)
Translates to: TKGISQGECPFWTVRKVKWLNLL*DLRQLP
Trigger: GGGCAATTGTCTGAGGTCTCAAAGTAAGTTAAGCCA...CTTGACCTTCCTTACAGTCCAGAAAGGACATTCTCCCTGAGAAATGCCCTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATGCCCCACTTTTCTCCTaGAAACCTTTGTGGTGCCTA +
Preference number: 4 (lower is better)
Translates to: RSSHVVSGNAEAVDCRHYAPLFS*KPLWCL
Trigger: TAGGCACCACAAAGGTTTTCAGGAGAAAAGTGGGGC...ATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367835.1
ENST00000537209.5
CDS-3UTR GCA 90 bp AAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTGGTTTCTCCCTTTTGCAAAGATCCATTCCCTaGGGATGGAGCTCGTCACCA +
Preference number: 4 (lower is better)
Translates to: KHLVPALPLVFYSGFSLLQRSIP*GWSSSP
Trigger: TGGTGACGAGCTCCATCCGCAGGGAATGGATCTTTG...CAAAAGGGAGAAACCACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
CDS-3UTR GCA 90 bp GTTGTGAATGTATCTTGTGGTCCATCCAGAGACATGTCTAATCTGCAAGTATCTCCAGATGTAGACAAGTaGCATCACAGCCCGGTTCCC +
Preference number: 4 (lower is better)
Translates to: VVNVSCGPSRDMSNLQVSPDVDK*HHSPVP
Trigger: GGGAACCGGGCTGTGATGGCACTTGTCTACATCTGG...AGATACTTGCAGATTAGACATGTCTCTGGATGGACCACAAGATACATTCACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTGGTCCCCAAAGCACATaGCCAGTAGTTCTTTGCGAA +
Preference number: 4 (lower is better)
Translates to: EAHMWSLEMLKLWTVDIIGPQST*PVVLCE
Trigger: TTCGCAAAGAACTACTGGGCATGTGCTTTGGGGACC...AATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AGGCCAGCTATTTTCATTGGTCACTCAAACATCACACATAGAATCTATTTAATGTCACAAGAGTTCTGCTaGCTCGGCGGCCCCCGAAGC +
Preference number: 4 (lower is better)
Translates to: RPAIFIGHSNITHRIYLMSQEFC*LGGPRS
Trigger: GCTTCGGGGGCCGCCGAGGCAGCAGAACTCTTGTGA...CATTAAATAGATTCTATGTGTGATGTTTGAGTGACCAATGAAAATAGCTGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ATACAAAGGTCGGTCCGTGGGTCTGCTTTTGTGTTTTACCTATCTCTGCTTTACCATCTCCTTCTTCGATaGTCTGCAACTGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: IQRSVRGSAFVFYLSLLYHLLLR*SATAAS
Trigger: AGAGGCTGCAGTTGCAGAGCATCGAAGAAGGAGATG...GTAAAGCAGAGATAGGTAAAACACAAAAGCAGACCCACGGACCGACCTTTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GACTTGACTTTGCTAGTTATTAGAATCGGTATCCACAGGTCCTGCTCCCTAAATTGGCTGCATACCAGATaGTGCTCCTTCCCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: DLTLLVIRIGIHRSCSLNWLHTR*CSFPVC
Trigger: ACACACAGGGAAGGAGCAGCATCTGGTATGCAGCCA...ATTTAGGGAGCAGGACCTGTGGATACCGATTCTAATAACTAGCAAAGTCAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTAAACTTCCCTTCACAGATGAGGAAACTCATAAGTAGTGACTTGTTTGAAAACAGGCATCTGGCACAGTaGACGGCTGGACTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LNFPSQMRKLISSDLFENRHLAQ*TAGLPA
Trigger: TGCTGGGAGTCCAGCCGTGCACTGTGCCAGATGCCT...GTTTTCAAACAAGTCACTACTTATGAGTTTCCTCATCTGTGAAGGGAAGTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTAAACTTCCCTTCACAGATGAGGAAACTCATAAGTAGTGACTTGTTTGAAAACCGCTCCGAAGCGCTCTaGTCCTGGGTGCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LNFPSQMRKLISSDLFENRSEAL*SWVLSL
Trigger: CAGAGAAAGCACCCAGGAGCAGAGCGCTTCGGAGCG...GTTTTCAAACAAGTCACTACTTATGAGTTTCCTCATCTGTGAAGGGAAGTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TTAATTCTGGAAATGAAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTGCCAATAACCCAGGTTaGTGGCTGTGGGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LILEMKHLVPALPLVFYSANNPG*WLWVQG
Trigger: GCCCTGGACCCACAGCCAGCAACCTGGGTTATTGGC...ACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTTCATTTCCAGAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TTAATTCTGGAAATGAAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTGGTGAACCTGCCCTCTaGTCCTTCCCACTCCCATCC +
Preference number: 4 (lower is better)
Translates to: LILEMKHLVPALPLVFYSGEPAL*SFPLPS
Trigger: GGATGGGAGTGGGAAGGAGCAGAGGGCAGGTTCACC...ACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTTCATTTCCAGAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AAGGGTAATTCACTTTCTAGAACAGCTGCCTCTCAGCAACCAGCAAGATCTCCTCCTGTTCCACCTCTGTaGACACTAGTTGATCAGGAA +
Preference number: 4 (lower is better)
Translates to: KGNSLSRTAASQQPARSPPVPPL*TLVDQE
Trigger: TTCCTGATCAACTAGTGTGCACAGAGGTGGAACAGG...AGGAGATCTTGCTGGTTGCTGAGAGGCAGCTGTTCTAGAAAGTGAATTACCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATACCTGTTCCACCTCTGTaGACACTAGTTGATCAGGAA +
Preference number: 4 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCIPVPPL*TLVDQE
Trigger: TTCCTGATCAACTAGTGTGCACAGAGGTGGAACAGG...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTGGTTTCTCCCTTTTGCAGAGCCTAGCCTGGTaGTTCGCATACACTGGATGT +
Preference number: 4 (lower is better)
Translates to: KHLVPALPLVFYSGFSLLQSLAW*FAYTGC
Trigger: ACATCCAGTGTATGCGAAGCACCAGGCTAGGCTCTG...CAAAAGGGAGAAACCACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGATGTGGGACTCCCAATaGCTTCTGGGTCAAAACAAC +
Preference number: 4 (lower is better)
Translates to: NAEAVDCRHYFQSLSWWLMWDSQ*LLGQNN
Trigger: GTTGTTTTGACCCAGAAGGCATTGGGAGTCCCACAT...CAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTGTTGAGCTGTGTGTGTaGTCTGTAATGTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: EAHMWSLEMLKLWTVDIIVELCV*SVMWDS
Trigger: GGAGTCCCACATTACAGAGCACACACACAGCTCAAC...AATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATATAAGACTAGCTCCTTaGTTTTCTCATCCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: AEAVDCRHYFQSLSWWLHIRLAP*FSHPLG
Trigger: GCCAAGGGGATGAGAAAAGCAAGGAGCTAGTCTTAT...ATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GGCCGTGGACTACACGATAAGGGCAAAGGAATTCAAAACAAGAGTGCCCAGCCATACTACCCAGGAAAATaGTTGCTGAGAGAAATGAAC +
Preference number: 4 (lower is better)
Translates to: GRGLHDKGKGIQNKSAQPYYPGK*LLREMN
Trigger: GTTCATTTCTCTCAGCAAGCATTTTCCTGGGTAGTA...TGGCTGGGCACTCTTGTTTTGAATTCCTTTGCCCTTATCGTGTAGTCCACGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CATCACTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTCCTGGTATCGCCTTTaGTGCTCACCTTTCATTCAT +
Preference number: 4 (lower is better)
Translates to: HHWDLKEAHMWSLEMLKLSWYRL*CSPFIH
Trigger: ATGAATGAAAGGTGAGCAGCAAAGGCGATACCAGGA...CAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAGTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367835.1
ENST00000537209.5
CDS-3UTR CCA 90 bp AAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTGGTTTCTCCCTTTTGTCCATTCCCTGCGGATaGAGCTCGTCACCACAAAAG +
Preference number: 4 (lower is better)
Translates to: KHLVPALPLVFYSGFSLLSIPCG*SSSPQK
Trigger: CTTTTGTGGTGACGAGCTCCATCCGCAGGGAATGGA...CAAAAGGGAGAAACCACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
CDS-3UTR CCA 90 bp GAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTCATGGGGTACACCATaGGGTACAGGACAGCATAGT +
Preference number: 4 (lower is better)
Translates to: EAHMWSLEMLKLWTVDIISWGTP*GTGQHS
Trigger: ACTATGCTGTCCTGTACCCCATGGTGTACCCCATGA...AATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp ATACAAAGGTCGGTCCGTGGGTCTGCTTTTGTGTTTTACCTATCTCTGCTTTACTCATGGGGTACACCATaGGGTACAGGACAGCATAGT +
Preference number: 4 (lower is better)
Translates to: IQRSVRGSAFVFYLSLLYSWGTP*GTGQHS
Trigger: ACTATGCTGTCCTGTACCCCATGGTGTACCCCATGA...GTAAAGCAGAGATAGGTAAAACACAAAAGCAGACCCACGGACCGACCTTTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTCATGGGGTACACCATaGGGTACAGGACAGCATAGT +
Preference number: 4 (lower is better)
Translates to: RSSHVVSGNAEAVDCRHYSWGTP*GTGQHS
Trigger: ACTATGCTGTCCTGTACCCCATGGTGTACCCCATGA...ATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TTAATTCTGGAAATGAAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTAGGAGGTGGAGGTGCTaGAGTTCTTCCTCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: LILEMKHLVPALPLVFYSRRWRC*SSSSRS
Trigger: GGACCGGGAGGAAGAACTCCAGCACCTCCACCTCCT...ACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTTCATTTCCAGAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GACTTGACTTTGCTAGTTATTAGAATCGGTATCCACAGGTCCTGCTCCCTAAATTGTAACCAAGACCCCTaGCAAAGCCTCCTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: DLTLLVIRIGIHRSCSLNCNQDP*QSLLPK
Trigger: TTTGGGGAGGAGGCTTTGCCAGGGGTCTTGGTTACA...ATTTAGGGAGCAGGACCTGTGGATACCGATTCTAATAACTAGCAAAGTCAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GTTGTGAATGTATCTTGTGGTCCATCCAGAGACATGTCTAATCTGCAAGTATCTCAGTCCTTGTCCTGGTaGCTGCATACCAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: VVNVSCGPSRDMSNLQVSQSLSW*LHTRCC
Trigger: GCAGCATCTGGTATGCAGCCACCAGGACAAGGACTG...AGATACTTGCAGATTAGACATGTCTCTGGATGGACCACAAGATACATTCACAAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGGAAATGCTGAAGCTGTaGACTGTAGACATTATTTTC +
Preference number: 4 (lower is better)
Translates to: KKCCVILHSTLGRVLLLREMLKL*TVDIIF
Trigger: GAAAATAATGTCTACAGTCCACAGCTTCAGCATTTC...CCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CTAAACTTCCCTTCACAGATGAGGAAACTCATAAGTAGTGACTTGTTTGAAAACCAAGCCCTTCGTCTCTaGTCCTCCCATGCCCCACCT +
Preference number: 4 (lower is better)
Translates to: LNFPSQMRKLISSDLFENQALRL*SSHAPP
Trigger: AGGTGGGGCATGGGAGGACCAGAGACGAAGGGCTTG...GTTTTCAAACAAGTCACTACTTATGAGTTTCCTCATCTGTGAAGGGAAGTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATAAGTAACTGTTGCTCTTaGGAGTGTGCCATGCAGAAC +
Preference number: 4 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCISNCCS*ECAMQN
Trigger: GTTCTGCATGGCACACTCCCAAGAGCAACAGTTACT...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTATGCATCTTGGTGGCTaGCATTCTATCCAGATTGTG +
Preference number: 4 (lower is better)
Translates to: GPKRSSHVVSGNAEAVDCMHLGG*HSIQIV
Trigger: CACAATCTGGATAGAATGCCAGCCACCAAGATGCAT...ACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGGCCCCTCATGCATCTTaGTGGCTGGCATTCTATCCA +
Preference number: 4 (lower is better)
Translates to: SHVVSGNAEAVDCRHYFQAPHAS*WLAFYP
Trigger: TGGATAGAATGCCAGCCACCAAGATGCATGAGGGGC...CTGAAAATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GGGAATATATATAGAAAACGTGAACCACACGCAGACGTAGGAATGCCATCCAGTCAAACCTGGTATCTGTaGCATAGCACAGGGACCCAA +
Preference number: 4 (lower is better)
Translates to: GNIYRKREPHADVGMPSSQTWYL*HSTGTQ
Trigger: TTGGGTCCCTGTGCTATGCCACAGATACCAGGTTTG...ACTGGATGGCATTCCTACGTCTGCGTGTGGTTCACGTTTTCTATATATATTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTGGTTTCTCCCTTTTGCCTGAACTTCAGTCTTaGTGCCTCTGGCCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: KHLVPALPLVFYSGFSLLPELQS*CLWPGK
Trigger: TTTCCCTGGCCAGAGGCACCAAGACTGAAGTTCAGG...CAAAAGGGAGAAACCACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATGTTCTGCATATATTGTaGGTAGCATCCCTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: RSSHVVSGNAEAVDCRHYVLHIL*VASLPC
Trigger: GCAGGGCAGGGATGCTACCCACAATATATGCAGAAC...ATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATCCCTTGGCCAAGACTTaGAGTTTGGCTTTGACTCTG +
Preference number: 4 (lower is better)
Translates to: RSSHVVSGNAEAVDCRHYPLAKT*SLALTL
Trigger: CAGAGTCAAAGCCAAACTCCAAGTCTTGGCCAAGGG...ATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTCCCTTGGCCAAGACTTaGAGTTTGGCTTTGACTCTG +
Preference number: 4 (lower is better)
Translates to: EAHMWSLEMLKLWTVDIIPLAKT*SLALTL
Trigger: CAGAGTCAAAGCCAAACTCCAAGTCTTGGCCAAGGG...AATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR CAA 72 bp AAGAGGCAGAGGTGGGCAGCAGTCCTAAATGTGGTCTaGTCAAAACCAGAAGACACAGGACTGAGTTGTTTA +
Preference number: 4 (lower is better)
Translates to: KRQRWAAVLNVV*SKPEDTGLSCL
Trigger: TAAACAACTCAGTCCTGTGTCTTCTGGTTTTGACAAGACCACATTTAGGACTGCTGCCCACCTCTGCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR CAA 72 bp TGTCCTTTCTGGACTGTAAGGAAGGTCAAGCTGTATTaGTGCTATGATTTGGAACGTTACACCAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: CPFWTVRKVKLY*CYDLERYTRPW
Trigger: CCAGGGCCTGGTGTAACGTTCCAAATCATAGCACAAATACAGCTTGACCTTCCTTACAGTCCAGAAAGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TTAATTCTGGAAATGAAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTCAGCCCGGTTCCCTGTaGTCTTCATGGGGTACACCA +
Preference number: 4 (lower is better)
Translates to: LILEMKHLVPALPLVFYSQPGSL*SSWGTP
Trigger: TGGTGTACCCCATGAAGATCACAGGGAACCGGGCTG...ACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTTCATTTCCAGAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AGGCCAGCTATTTTCATTGGTCACTCAAACATCACACATAGAATCTATTTAATGTTCCTCCCGGTCCTCTaGGCATCCTCCTCCACGATG +
Preference number: 4 (lower is better)
Translates to: RPAIFIGHSNITHRIYLMFLPVL*ASSSTM
Trigger: CATCGTGGAGGAGGATGCTCAGAGGACCGGGAGGAA...CATTAAATAGATTCTATGTGTGATGTTTGAGTGACCAATGAAAATAGCTGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATACTTCAGCTTTCACATaGAGAATCGAGTTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: AEAVDCRHYFQSLSWWLHTSAFT*RIEFLA
Trigger: TGCCAAGAACTCGATTCTTCATGTGAAAGCTGAAGT...ATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CATCACTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGACTTCAGCTTTCACATaGAGAATCGAGTTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: HHWDLKEAHMWSLEMLKLTSAFT*RIEFLA
Trigger: TGCCAAGAACTCGATTCTTCATGTGAAAGCTGAAGT...CAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAGTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTGGTTTCTCCCTTTTGACTCCCAGCACACTGTaGAGAGGAGGAAATGATGCA +
Preference number: 4 (lower is better)
Translates to: KHLVPALPLVFYSGFSLLTPSTL*RGGNDA
Trigger: TGCATCATTTCCTCCTCTTCACAGTGTGCTGGGAGT...CAAAAGGGAGAAACCACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp ATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCTGTAAAGCAGAGAAGTCCTaGACTTATTTAGTCATGATG +
Preference number: 4 (lower is better)
Translates to: INHVEAPGRSRVIRKKCCKAEKS*TYLVMM
Trigger: CATCATGACTAAATAAGTTCAGGACTTCTCTGCTTT...ACAGCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGGCCAGGGCTCAAGGCTaGACACATGTTGTGAATGTA +
Preference number: 4 (lower is better)
Translates to: SHVVSGNAEAVDCRHYFQARAQG*THVVNV
Trigger: TACATTCACAACATGTGTTCAGCCTTGAGCCCTGGC...CTGAAAATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CATCACTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGGCTGTATTTGTGCTATaGTTTGGAACGTTACACCAG +
Preference number: 4 (lower is better)
Translates to: HHWDLKEAHMWSLEMLKLAVFVL*FGTLHQ
Trigger: CTGGTGTAACGTTCCAAATCATAGCACAAATACAGC...CAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAGTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTAAACTTCCCTTCACAGATGAGGAAACTCATAAGTAGTGACTTGTTTGAAAACAGGTCTTCACACTGCTaGCCTGCACTCCCTCGGAAC +
Preference number: 4 (lower is better)
Translates to: LNFPSQMRKLISSDLFENRSSHC*PALPRN
Trigger: GTTCCGAGGGAGTGCAGGGCAGCAGTGTGAAGACCT...GTTTTCAAACAAGTCACTACTTATGAGTTTCCTCATCTGTGAAGGGAAGTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AATCTACCTTCTGCCAACCAAAGCAGAGAAGTCCTGAACTTATTTAGTCATGATCTGAGGGTCCCACACTaGCCGCATCAACCATGTAGA +
Preference number: 4 (lower is better)
Translates to: NLPSANQSREVLNLFSHDLRVPH*PHQPCR
Trigger: TCTACATGGTTGATGCGGGCAGTGTGGGACCCTCAG...ATCATGACTAAATAAGTTCAGGACTTCTCTGCTTTGGTTGGCAGAAGGTAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GTTGTGAATGTATCTTGTGGTCCATCCAGAGACATGTCTAATCTGCAAGTATCTTTGCTCTTGGGAGTGTaGCATGCAGAACTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: VVNVSCGPSRDMSNLQVSLLLGV*HAELRP
Trigger: TGGCCTCAGTTCTGCATGGCACACTCCCAAGAGCAA...AGATACTTGCAGATTAGACATGTCTCTGGATGGACCACAAGATACATTCACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AAGGGTAATTCACTTTCTAGAACAGCTGCCTCTCAGCAACCAGCAAGATCTCCTCTGTGGGTCCAGGGCTaGTTCTATCTTATTTATACC +
Preference number: 4 (lower is better)
Translates to: KGNSLSRTAASQQPARSPLWVQG*FYLIYT
Trigger: GGTATAAATAAGATAGAAGCAGCCCTGGACCCACAG...AGGAGATCTTGCTGGTTGCTGAGAGGCAGCTGTTCTAGAAAGTGAATTACCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ATACAAAGGTCGGTCCGTGGGTCTGCTTTTGTGTTTTACCTATCTCTGCTTTACGGACCAAACTTCAACTaGTGTTCCAGCACAAAGGGA +
Preference number: 4 (lower is better)
Translates to: IQRSVRGSAFVFYLSLLYGPNFN*CSSTKG
Trigger: TCCCTTTGTGCTGGAACAGCAGTTGAAGTTTGGTCC...GTAAAGCAGAGATAGGTAAAACACAAAAGCAGACCCACGGACCGACCTTTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATAGGTCTTTTACAAACTaGAGACCAGGGGACCAGCTA +
Preference number: 4 (lower is better)
Translates to: RSSHVVSGNAEAVDCRHYRSFTN*RPGDQL
Trigger: TAGCTGGTCCCCTGGTCTGCAGTTTGTAAAAGACCT...ATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATAGTTTCAAAGCCAAGCTaGTGCACTCAAGAATGCCTA +
Preference number: 4 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCIVSKPS*CTQECL
Trigger: TAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAAC...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ATACAAAGGTCGGTCCGTGGGTCTGCTTTTGTGTTTTACCTATCTCTGCTTTACACATTCTCCAACCCTTaGGTTTCAAAGCCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: IQRSVRGSAFVFYLSLLYTFSNP*VSKPSC
Trigger: GCAGCTTGGCTTTGAAACGCAAGGGTTGGAGAATGT...GTAAAGCAGAGATAGGTAAAACACAAAAGCAGACCCACGGACCGACCTTTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAATTCAAAACAAGAGTaGCCAGCCAGAGGCAAACAA +
Preference number: 4 (lower is better)
Translates to: GPKRSSHVVSGNAEAVDCNSKQE*PARGKQ
Trigger: TTGTTTGCCTCTGGCTGGGCACTCTTGTTTTGAATT...ACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TTCCTGGCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACGAGACATGTCTAATCTaGAAGTATCTAAGAGGCATA +
Preference number: 4 (lower is better)
Translates to: FLAVLGTTVPFSPVKQWYETCLI*KYLRGI
Trigger: TATGCCTCTTAGATACTTGCAGATTAGACATGTCTC...GTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGCCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CATCACTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGAGGCATTGTGCTGCATaGTTTCCAAGTATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: HHWDLKEAHMWSLEMLKLRHCAA*FPSISS
Trigger: TGAGGAAATACTTGGAAAGCATGCAGCACAATGCCT...CAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAGTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CGCGTGTCATTAGGAAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGGCAGATTTGAGTTTGTaGTTTGATGTTTTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: RVSLGRSAVSSFTVHWGGADLSL*FDVFKG
Trigger: TCCTTTGAAAACATCAAAGCACAAACTCAAATCTGC...CCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTTCCTAATGACACGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCATGGGGTACACCATaGGGTACAGGACAGCATAGT +
Preference number: 4 (lower is better)
Translates to: SHVVSGNAEAVDCRHYFQSWGTP*GTGQHS
Trigger: ACTATGCTGTCCTGTACCCCATGGTGTACCCCATGA...CTGAAAATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTCTGTCGTTGCACAAATaGTTCCCGATAATACCGGTC +
Preference number: 4 (lower is better)
Translates to: EAHMWSLEMLKLWTVDIILSLHK*FPIIPV
Trigger: GACCGGTATTATCGGGAACCATTTGTGCAACGACAG...AATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AATCTACCTTCTGCCAACCAAAGCAGAGAAGTCCTGAACTTATTTAGTCATGATTGGCTTCGGCCTCAATaGCTTTGGCCAAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: NLPSANQSREVLNLFSHDWLRPQ*LWPSLL
Trigger: CAGCAAGCTTGGCCAAAGCCATTGAGGCCGAAGCCA...ATCATGACTAAATAAGTTCAGGACTTCTCTGCTTTGGTTGGCAGAAGGTAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTGCTTTAGATGCTTCTaGTCCCATCACTGGGACCTA +
Preference number: 4 (lower is better)
Translates to: RSSHVVSGNAEAVDCRHYCFRCF*SHHWDL
Trigger: TAGGTCCCAGTGATGGGACCAGAAGCATCTAAAGCA...ATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271357.9
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GTTGTGAATGTATCTTGTGGTCCATCCAGAGACATGTCTAATCTGCAAGTATCTTCTGCAAGAGGCCTGTaGCTGTCCCTATTAGCACCA +
Preference number: 4 (lower is better)
Translates to: VVNVSCGPSRDMSNLQVSSARGL*LSLLAP
Trigger: TGGTGCTAATAGGGACAGCCACAGGCCTCTTGCAGA...AGATACTTGCAGATTAGACATGTCTCTGGATGGACCACAAGATACATTCACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTCCTCATGCATCTTGGTaGCTGGCATTCTATCCAGAT +
Preference number: 4 (lower is better)
Translates to: EAHMWSLEMLKLWTVDIIPHASW*LAFYPD
Trigger: ATCTGGATAGAATGCCAGCCACCAAGATGCATGAGG...AATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTGGACCAGCTAACCATTaGTTTCTGCCACACAACACA +
Preference number: 4 (lower is better)
Translates to: EAHMWSLEMLKLWTVDIIGPANH*FLPHNT
Trigger: TGTGTTGTGTGGCAGAAACCAATGGTTAGCTGGTCC...AATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GACTTGACTTTGCTAGTTATTAGAATCGGTATCCACAGGTCCTGCTCCCTAAATCAAACCTGGTATCTGTaGCATAGCACAGGGACCCAA +
Preference number: 4 (lower is better)
Translates to: DLTLLVIRIGIHRSCSLNQTWYL*HSTGTQ
Trigger: TTGGGTCCCTGTGCTATGCCACAGATACCAGGTTTG...ATTTAGGGAGCAGGACCTGTGGATACCGATTCTAATAACTAGCAAAGTCAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AAGGGTAATTCACTTTCTAGAACAGCTGCCTCTCAGCAACCAGCAAGATCTCCTAACATTGGCACTAGATaGCCCTTGTCTTACACTCCT +
Preference number: 4 (lower is better)
Translates to: KGNSLSRTAASQQPARSPNIGTR*PLSYTP
Trigger: AGGAGTGTAAGACAAGGGCCATCTAGTGCCAATGTT...AGGAGATCTTGCTGGTTGCTGAGAGGCAGCTGTTCTAGAAAGTGAATTACCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATTGTGAATGTATCTTGTaGTCCATCCAGAGACATGTC +
Preference number: 4 (lower is better)
Translates to: AEAVDCRHYFQSLSWWLHCECIL*SIQRHV
Trigger: GACATGTCTCTGGATGGACCACAAGATACATTCACA...ATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TTAATTCTGGAAATGAAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTGTCAAACTCCACGGATaGCCAACCAAACAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LILEMKHLVPALPLVFYSVKLHG*PTKQGW
Trigger: CCACCCCTGTTTGGTTGGTCATCCGTGGAGTTTGAC...ACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTTCATTTCCAGAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGACTTCAGCTTTCACATaGAGAATCGAGTTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: NAEAVDCRHYFQSLSWWLTSAFT*RIEFLA
Trigger: TGCCAAGAACTCGATTCTTCATGTGAAAGCTGAAGT...CAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTGAGGACCTAGAAAGGTaGCAAGATGTCCAAATGACA +
Preference number: 4 (lower is better)
Translates to: EAHMWSLEMLKLWTVDIIEDLER*QDVQMT
Trigger: TGTCATTTGGACATCTTGTCACCTTTCTAGGTCCTC...AATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GACTTGACTTTGCTAGTTATTAGAATCGGTATCCACAGGTCCTGCTCCCTAAATAAAGCCACAGAACCTTaGTCTGCCTGCACTTCACAT +
Preference number: 4 (lower is better)
Translates to: DLTLLVIRIGIHRSCSLNKATEP*SACTSH
Trigger: ATGTGAAGTGCAGGCAGATCAAGGTTCTGTGGCTTT...ATTTAGGGAGCAGGACCTGTGGATACCGATTCTAATAACTAGCAAAGTCAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GACTTGACTTTGCTAGTTATTAGAATCGGTATCCACAGGTCCTGCTCCCTAAATATACCCACCTCCCTCTaGAGCCACACTTCTTTCTAT +
Preference number: 4 (lower is better)
Translates to: DLTLLVIRIGIHRSCSLNIPTSL*SHTSFY
Trigger: ATAGAAAGAAGTGTGGCTTCAGAGGGAGGTGGGTAT...ATTTAGGGAGCAGGACCTGTGGATACCGATTCTAATAACTAGCAAAGTCAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp ACCAAGGGCATTTCTCAGGGAGAATGTCCTTTCTGGACTGTAAGGAAGGTCAAGTGCACTGGGGTAAAATaGGATAAAGCATTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: TKGISQGECPFWTVRKVKCTGVK*DKAFGS
Trigger: ACTTCCAAATGCTTTATCTCATTTTACCCCAGTGCA...CTTGACCTTCCTTACAGTCCAGAAAGGACATTCTCCCTGAGAAATGCCCTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATAGGACTGACTCACCTGTaGTTTGTGGTATTTCAAACT +
Preference number: 4 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCIGLTHL*FVVFQT
Trigger: AGTTTGAAATACCACAAATCACAGGTGAGTCAGTCC...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTAAACTTCCCTTCACAGATGAGGAAACTCATAAGTAGTGACTTGTTTGAAAACCCAGATGTAGACAAGTaGCATCACAGCCCGGTTCCC +
Preference number: 4 (lower is better)
Translates to: LNFPSQMRKLISSDLFENPDVDK*HHSPVP
Trigger: GGGAACCGGGCTGTGATGGCACTTGTCTACATCTGG...GTTTTCAAACAAGTCACTACTTATGAGTTTCCTCATCTGTGAAGGGAAGTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTAAACTTCCCTTCACAGATGAGGAAACTCATAAGTAGTGACTTGTTTGAAAACCCTTCTTCGATGCTCTaGAACTGCAGCCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LNFPSQMRKLISSDLFENPSSML*NCSLWL
Trigger: GAGCCAGAGGCTGCAGTTGCAGAGCATCGAAGAAGG...GTTTTCAAACAAGTCACTACTTATGAGTTTCCTCATCTGTGAAGGGAAGTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AATCTACCTTCTGCCAACCAAAGCAGAGAAGTCCTGAACTTATTTAGTCATGATTGGCTGCATACCAGATaGTGCTCCTTCCCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: NLPSANQSREVLNLFSHDWLHTR*CSFPVC
Trigger: ACACACAGGGAAGGAGCAGCATCTGGTATGCAGCCA...ATCATGACTAAATAAGTTCAGGACTTCTCTGCTTTGGTTGGCAGAAGGTAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GGTCACTCAAACATCACACATAGAATCTATTTAATGAGGCTTTCCCATGTGAACTTGCTCTTGGGAGTGTaGCATGCAGAACTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GHSNITHRIYLMRLSHVNLLLGV*HAELRP
Trigger: TGGCCTCAGTTCTGCATGGCACACTCCCAAGAGCAA...GTTCACATGGGAAAGCCTCATTAAATAGATTCTATGTGTGATGTTTGAGTGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CGTTTCAAAGCCAAGCTGCTGCACTCAAGAATGCCTACACCTAACCAGCAACCCTGTTTTACCTATCTCTaGTTTACAAATCCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: RFKAKLLHSRMPTPNQQPCFTYL*FTNPEN
Trigger: GTTCTCAGGATTTGTAAAGCAGAGATAGGTAAAACA...GGGTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCTGTTGTTTTACCTATCTCTaGTTTACAAATCCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: INHVEAPGRSRVIRKKCCCFTYL*FTNPEN
Trigger: GTTCTCAGGATTTGTAAAGCAGAGATAGGTAAAACA...ACAGCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTGGTTTCTCCCTTTTGGGACCAAACTTCAACTaGTGTTCCAGCACAAAGGGA +
Preference number: 4 (lower is better)
Translates to: KHLVPALPLVFYSGFSLLGPNFN*CSSTKG
Trigger: TCCCTTTGTGCTGGAACAGCAGTTGAAGTTTGGTCC...CAAAAGGGAGAAACCACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GACTTGACTTTGCTAGTTATTAGAATCGGTATCCACAGGTCCTGCTCCCTAAATTCAAAGCCAAGCTGCTaGACTCAAGAATGCCTACAC +
Preference number: 4 (lower is better)
Translates to: DLTLLVIRIGIHRSCSLNSKPSC*TQECLH
Trigger: GTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGA...ATTTAGGGAGCAGGACCTGTGGATACCGATTCTAATAACTAGCAAAGTCAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GGTCACTCAAACATCACACATAGAATCTATTTAATGAGGCTTTCCCATGTGAACCAGAGCCTAGCCTGGTaGTTCGCATACACTGGATGT +
Preference number: 4 (lower is better)
Translates to: GHSNITHRIYLMRLSHVNQSLAW*FAYTGC
Trigger: ACATCCAGTGTATGCGAAGCACCAGGCTAGGCTCTG...GTTCACATGGGAAAGCCTCATTAAATAGATTCTATGTGTGATGTTTGAGTGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACGTCTTAGTCAAGCTGTATTTGTaGTATGATTTGGAACGTTAC +
Preference number: 4 (lower is better)
Translates to: AVLGTTVPFSPVKQWYVLVKLYL*YDLERY
Trigger: GTAACGTTCCAAATCATAGCACAAATACAGCTTGAC...TAAGACGTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACGTCAAGCTGTATTTGTaGTATGATTTGGAACGTTAC +
Preference number: 4 (lower is better)
Translates to: LGPKRSSHVVSGNAEAVDVKLYL*YDLERY
Trigger: GTAACGTTCCAAATCATAGCACAAATACAGCTTGAC...GTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AATCTACCTTCTGCCAACCAAAGCAGAGAAGTCCTGAACTTATTTAGTCATGATGAGACCTCAGACAATTaGCCTGGATTCTGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: NLPSANQSREVLNLFSHDETSDN*PGFCVP
Trigger: GGGGACACAGAATCCAGGGCAATTGTCTGAGGTCTC...ATCATGACTAAATAAGTTCAGGACTTCTCTGCTTTGGTTGGCAGAAGGTAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCTGTGCAGATTTGAGTTTGTaGTTTGATGTTTTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: INHVEAPGRSRVIRKKCCADLSL*FDVFKG
Trigger: TCCTTTGAAAACATCAAAGCACAAACTCAAATCTGC...ACAGCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GGCCGTGGACTACACGATAAGGGCAAAGGAATTCAAAACAAGAGTGCCCAGCCAGCTTTTGTAATCTTGTaGAGATTTGAGTTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: GRGLHDKGKGIQNKSAQPAFVIL*RFEFVL
Trigger: AAGCACAAACTCAAATCTGCACAAGATTACAAAAGC...TGGCTGGGCACTCTTGTTTTGAATTCCTTTGCCCTTATCGTGTAGTCCACGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCTGTGCTTTTGTAATCTTGTaGAGATTTGAGTTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: INHVEAPGRSRVIRKKCCAFVIL*RFEFVL
Trigger: AAGCACAAACTCAAATCTGCACAAGATTACAAAAGC...ACAGCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGCTGTCGTTGCACAAATaGTTCCCGATAATACCGGTC +
Preference number: 4 (lower is better)
Translates to: SHVVSGNAEAVDCRHYFQLSLHK*FPIIPV
Trigger: GACCGGTATTATCGGGAACCATTTGTGCAACGACAG...CTGAAAATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTGGTTTCTCCCTTTTGCTGTCGTTGCACAAATaGTTCCCGATAATACCGGTC +
Preference number: 4 (lower is better)
Translates to: KHLVPALPLVFYSGFSLLLSLHK*FPIIPV
Trigger: GACCGGTATTATCGGGAACCATTTGTGCAACGACAG...CAAAAGGGAGAAACCACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TTAATTCTGGAAATGAAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTCAGTCCTTGTCCTGGTaGCTGCATACCAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: LILEMKHLVPALPLVFYSQSLSW*LHTRCC
Trigger: GCAGCATCTGGTATGCAGCCACCAGGACAAGGACTG...ACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTTCATTTCCAGAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTGGTTTCTCCCTTTTGTGCTTTAGATGCTTCTaGTCCCATCACTGGGACCTA +
Preference number: 4 (lower is better)
Translates to: KHLVPALPLVFYSGFSLLCFRCF*SHHWDL
Trigger: TAGGTCCCAGTGATGGGACCAGAAGCATCTAAAGCA...CAAAAGGGAGAAACCACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACGTCTTAAGTCCGGTAAAACAGTaGTACGTCTTAAATGGATTT +
Preference number: 4 (lower is better)
Translates to: AVLGTTVPFSPVKQWYVLSPVKQ*YVLNGF
Trigger: AAATCCATTTAAGACGTACCACTGTTTTACCGGACT...TAAGACGTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp ATACAAAGGTCGGTCCGTGGGTCTGCTTTTGTGTTTTACCTATCTCTGCTTTACATGCATCTTGGTGGCTaGCATTCTATCCAGATTGTG +
Preference number: 4 (lower is better)
Translates to: IQRSVRGSAFVFYLSLLYMHLGG*HSIQIV
Trigger: CACAATCTGGATAGAATGCCAGCCACCAAGATGCAT...GTAAAGCAGAGATAGGTAAAACACAAAAGCAGACCCACGGACCGACCTTTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GTTGTGAATGTATCTTGTGGTCCATCCAGAGACATGTCTAATCTGCAAGTATCTGCAAGAGGAGATCAGTaGCTTCCCAAGTCATCACAG +
Preference number: 4 (lower is better)
Translates to: VVNVSCGPSRDMSNLQVSARGDQ*LPKSSQ
Trigger: CTGTGATGACTTGGGAAGCCACTGATCTCCTCTTGC...AGATACTTGCAGATTAGACATGTCTCTGGATGGACCACAAGATACATTCACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTGGTTTCTCCCTTTTGACTCCCAATGCCTTCTaGGTCAAAACAACCCCAAAC +
Preference number: 4 (lower is better)
Translates to: KHLVPALPLVFYSGFSLLTPNAF*VKTTPN
Trigger: GTTTGGGGTTGTTTTGACCCAGAAGGCATTGGGAGT...CAAAAGGGAGAAACCACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp ATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCTGTTTGTTTTTCGAGGGTTaGTTTTTAACCACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: INHVEAPGRSRVIRKKCCLFFEG*FLTTSS
Trigger: TGAAGAAGTGGTTAAAAACCAACCCTCGAAAAACAA...ACAGCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TTCCTGGCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACTTGTTTTTCGAGGGTTaGTTTTTAACCACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: FLAVLGTTVPFSPVKQWYLFFEG*FLTTSS
Trigger: TGAAGAAGTGGTTAAAAACCAACCCTCGAAAAACAA...GTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGCCAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR CAA 72 bp CCACATAGTAGCTCCTCAAATAAGAATCAAGGAACATaGGCACTAGATGGCCCTTGTCTTACACTCCTCAAC +
Preference number: 4 (lower is better)
Translates to: PHSSSSNKNQGT*ALDGPCLTLLN
Trigger: GTTGAGGAGTGTAAGACAAGGGCCATCTAGTGCCAATGTTCCTTGATTCTTATTTGAGGAGCTACTATGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CATGACTTAACCATACCCACGTCTTCACCATCCTCACTATATCACACTTGCACTACTTCAGCTTTCACATaGAGAATCGAGTTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: HDLTIPTSSPSSLYHTCTTSAFT*RIEFLA
Trigger: TGCCAAGAACTCGATTCTTCATGTGAAAGCTGAAGT...AGTGCAAGTGTGATATAGTGAGGATGGTGAAGACGTGGGTATGGTTAAGTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATAGTGGTTTCTCCCTTTTaGAATACCAAAGAACTTGTC +
Preference number: 4 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCIVVSPF*NTKELV
Trigger: GACAAGTTCTTTGGTATTTCAAAAGGGAGAAACCAC...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGGAGGACCTAGAAAGGTaGCAAGATGTCCAAATGACA +
Preference number: 4 (lower is better)
Translates to: SHVVSGNAEAVDCRHYFQEDLER*QDVQMT
Trigger: TGTCATTTGGACATCTTGTCACCTTTCTAGGTCCTC...CTGAAAATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTGGTTTCTCCCTTTTGTGGCTTAACTTACTTTaGGACCTCAGACAATTGCCC +
Preference number: 4 (lower is better)
Translates to: KHLVPALPLVFYSGFSLLWLNLL*DLRQLP
Trigger: GGGCAATTGTCTGAGGTCTCAAAGTAAGTTAAGCCA...CAAAAGGGAGAAACCACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GGGAATATATATAGAAAACGTGAACCACACGCAGACGTAGGAATGCCATCCAGTGGACTGACTCACCTGTaGTTTGTGGTATTTCAAACT +
Preference number: 4 (lower is better)
Translates to: GNIYRKREPHADVGMPSSGLTHL*FVVFQT
Trigger: AGTTTGAAATACCACAAATCACAGGTGAGTCAGTCC...ACTGGATGGCATTCCTACGTCTGCGTGTGGTTCACGTTTTCTATATATATTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TTAATTCTGGAAATGAAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTTTCCTCTGGGAGGACTaGCTCACCTGTGATTTGTGG +
Preference number: 4 (lower is better)
Translates to: LILEMKHLVPALPLVFYSFLWED*LTCDLW
Trigger: CCACAAATCACAGGTGAGTCAGTCCTCCCAGAGGAA...ACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTTCATTTCCAGAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TTAATTCTGGAAATGAAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTTGGCTGCATACCAGATaGTGCTCCTTCCCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: LILEMKHLVPALPLVFYSWLHTR*CSFPVC
Trigger: ACACACAGGGAAGGAGCAGCATCTGGTATGCAGCCA...ACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTTCATTTCCAGAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AGGCCAGCTATTTTCATTGGTCACTCAAACATCACACATAGAATCTATTTAATGCCTGGGTGCTTTCTCTaGGGACCAGTCCTAGAACTG +
Preference number: 4 (lower is better)
Translates to: RPAIFIGHSNITHRIYLMPGCFL*GPVLEL
Trigger: CAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCAGG...CATTAAATAGATTCTATGTGTGATGTTTGAGTGACCAATGAAAATAGCTGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AATCTACCTTCTGCCAACCAAAGCAGAGAAGTCCTGAACTTATTTAGTCATGATCCTGCACTTCACATGTaGATGAGCAACCACACTCCA +
Preference number: 4 (lower is better)
Translates to: NLPSANQSREVLNLFSHDPALHM*MSNHTP
Trigger: TGGAGTGTGGTTGCTCATGCACATGTGAAGTGCAGG...ATCATGACTAAATAAGTTCAGGACTTCTCTGCTTTGGTTGGCAGAAGGTAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GGGAATATATATAGAAAACGTGAACCACACGCAGACGTAGGAATGCCATCCAGTATTCTATCCAGATTGTaGTCTAATGGACAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: GNIYRKREPHADVGMPSSILSRL*SNGQGR
Trigger: TCTGCCCTGTCCATTAGAGCACAATCTGGATAGAAT...ACTGGATGGCATTCCTACGTCTGCGTGTGGTTCACGTTTTCTATATATATTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AGATTGTGCTCTAATGGACAGGGCAGACAAAGCCACAGAACCTTGATCTGCCTGAGATATCCTCAGAAATaGTCTCAGGAACTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: RLCSNGQGRQSHRTLICLRYPQK*SQELQN
Trigger: ATTTTGAAGTTCCTGAGAGCATTTCTGAGGATATCT...CAGGCAGATCAAGGTTCTGTGGCTTTGTCTGCCCTGTCCATTAGAGCACAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GTTGTGAATGTATCTTGTGGTCCATCCAGAGACATGTCTAATCTGCAAGTATCTATGTGGGACTCCCAATaGCTTCTGGGTCAAAACAAC +
Preference number: 4 (lower is better)
Translates to: VVNVSCGPSRDMSNLQVSMWDSQ*LLGQNN
Trigger: GTTGTTTTGACCCAGAAGGCATTGGGAGTCCCACAT...AGATACTTGCAGATTAGACATGTCTCTGGATGGACCACAAGATACATTCACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp ATACAAAGGTCGGTCCGTGGGTCTGCTTTTGTGTTTTACCTATCTCTGCTTTACAATTCAAAACAAGAGTaGCCAGCCAGAGGCAAACAA +
Preference number: 4 (lower is better)
Translates to: IQRSVRGSAFVFYLSLLYNSKQE*PARGKQ
Trigger: TTGTTTGCCTCTGGCTGGGCACTCTTGTTTTGAATT...GTAAAGCAGAGATAGGTAAAACACAAAAGCAGACCCACGGACCGACCTTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CATCACTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGGAGACATGTCTAATCTaGAAGTATCTAAGAGGCATA +
Preference number: 4 (lower is better)
Translates to: HHWDLKEAHMWSLEMLKLETCLI*KYLRGI
Trigger: TATGCCTCTTAGATACTTGCAGATTAGACATGTCTC...CAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAGTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATGAAATGCTGAAGCTGTaGACTGTAGACATTATTTTC +
Preference number: 4 (lower is better)
Translates to: AEAVDCRHYFQSLSWWLHEMLKL*TVDIIF
Trigger: GAAAATAATGTCTACAGTCCACAGCTTCAGCATTTC...ATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATAAAGAAGCTCACATGTaGTCTCTGGAAATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: RSSHVVSGNAEAVDCRHYKEAHM*SLEMLK
Trigger: CTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTT...ATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GGGAATATATATAGAAAACGTGAACCACACGCAGACGTAGGAATGCCATCCAGTAAAGAAGCTCACATGTaGTCTCTGGAAATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: GNIYRKREPHADVGMPSSKEAHM*SLEMLK
Trigger: CTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTT...ACTGGATGGCATTCCTACGTCTGCGTGTGGTTCACGTTTTCTATATATATTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGAGTTTCTCTATTTCCTaGCTGTGCTTGGCACTACAG +
Preference number: 4 (lower is better)
Translates to: SHVVSGNAEAVDCRHYFQSFSIS*LCLALQ
Trigger: CTGTAGTGCCAAGCACAGCCAGGAAATAGAGAAACT...CTGAAAATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTGGTTTCTCCCTTTTGAGTTTCTCTATTTCCTaGCTGTGCTTGGCACTACAG +
Preference number: 4 (lower is better)
Translates to: KHLVPALPLVFYSGFSLLSFSIS*LCLALQ
Trigger: CTGTAGTGCCAAGCACAGCCAGGAAATAGAGAAACT...CAAAAGGGAGAAACCACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGACAAAGGTCGGTCCGTaGGTCTGCTTTTGTGTTTTA +
Preference number: 4 (lower is better)
Translates to: SHVVSGNAEAVDCRHYFQTKVGP*VCFCVL
Trigger: TAAAACACAAAAGCAGACCCACGGACCGACCTTTGT...CTGAAAATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTGTGAATGTATCTTGTaGTCCATCCAGAGACATGTC +
Preference number: 4 (lower is better)
Translates to: RSSHVVSGNAEAVDCRHYCECIL*SIQRHV
Trigger: GACATGTCTCTGGATGGACCACAAGATACATTCACA...ATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTATTTGTGCTATGATTTaGAACGTTACACCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: EAHMWSLEMLKLWTVDIIICAMI*NVTPGP
Trigger: AGGGCCTGGTGTAACGTTCCAAATCATAGCACAAAT...AATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR CAA 72 bp GCTATGATTTGGAACGTTACACCAGGCCCTGGGGATTaGATCATCTTTGATAGTCATTCCGGACAAATTAGA +
Preference number: 4 (lower is better)
Translates to: AMIWNVTPGPGD*IIFDSHSGQIR
Trigger: TCTAATTTGTCCGGAATGACTATCAAAGATGATCAAATCCCCAGGGCCTGGTGTAACGTTCCAAATCATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TTAATTCTGGAAATGAAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTTCCTGTTGGAAATGCTaGAGAGCCTGGAAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: LILEMKHLVPALPLVFYSSCWKC*RAWKSS
Trigger: AGAGGACTTCCAGGCTCTTCAGCATTTCCAACAGGA...ACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTTCATTTCCAGAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTGGTTTCTCCCTTTTGGACAAGATGTCCAAATaGCATGTGCACACAAAGACA +
Preference number: 4 (lower is better)
Translates to: KHLVPALPLVFYSGFSLLDKMSK*HVHTKT
Trigger: TGTCTTTGTGTGCACATGTCATTTGGACATCTTGTC...CAAAAGGGAGAAACCACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GTTGTGAATGTATCTTGTGGTCCATCCAGAGACATGTCTAATCTGCAAGTATCTGGTCAGAGCTGGAAATaGTCTTGGAGACCATTCAAT +
Preference number: 4 (lower is better)
Translates to: VVNVSCGPSRDMSNLQVSGQSWK*SWRPFN
Trigger: ATTGAATGGTCTCCAAGATCATTTCCAGCTCTGACC...AGATACTTGCAGATTAGACATGTCTCTGGATGGACCACAAGATACATTCACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GGTCACTCAAACATCACACATAGAATCTATTTAATGAGGCTTTCCCATGTGAACATACCCACCTCCCTCTaGAGCCACACTTCTTTCTAT +
Preference number: 4 (lower is better)
Translates to: GHSNITHRIYLMRLSHVNIPTSL*SHTSFY
Trigger: ATAGAAAGAAGTGTGGCTTCAGAGGGAGGTGGGTAT...GTTCACATGGGAAAGCCTCATTAAATAGATTCTATGTGTGATGTTTGAGTGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTGGTTTCTCCCTTTTGCTTGGAGTTTGGCTTTaGCTCTGGCTTAACTTACTT +
Preference number: 4 (lower is better)
Translates to: KHLVPALPLVFYSGFSLLLGVWL*LWLNLL
Trigger: AAGTAAGTTAAGCCAGAGTCAAAGCCAAACTCCAAG...CAAAAGGGAGAAACCACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AATCTACCTTCTGCCAACCAAAGCAGAGAAGTCCTGAACTTATTTAGTCATGATGTCGGTCCGTGGGTCTaGTTTTGTGTTTTACCTATC +
Preference number: 4 (lower is better)
Translates to: NLPSANQSREVLNLFSHDVGPWV*FCVLPI
Trigger: GATAGGTAAAACACAAAAGCAGACCCACGGACCGAC...ATCATGACTAAATAAGTTCAGGACTTCTCTGCTTTGGTTGGCAGAAGGTAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GGTCACTCAAACATCACACATAGAATCTATTTAATGAGGCTTTCCCATGTGAACCACAGAACCTTGATCTaGCTGCACTTCACATGTGCA +
Preference number: 4 (lower is better)
Translates to: GHSNITHRIYLMRLSHVNHRTLI*LHFTCA
Trigger: TGCACATGTGAAGTGCAGGCAGATCAAGGTTCTGTG...GTTCACATGGGAAAGCCTCATTAAATAGATTCTATGTGTGATGTTTGAGTGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AATCTACCTTCTGCCAACCAAAGCAGAGAAGTCCTGAACTTATTTAGTCATGATAGGTCTTTTACAAACTaGAGACCAGGGGACCAGCTA +
Preference number: 4 (lower is better)
Translates to: NLPSANQSREVLNLFSHDRSFTN*RPGDQL
Trigger: TAGCTGGTCCCCTGGTCTGCAGTTTGTAAAAGACCT...ATCATGACTAAATAAGTTCAGGACTTCTCTGCTTTGGTTGGCAGAAGGTAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AATCTACCTTCTGCCAACCAAAGCAGAGAAGTCCTGAACTTATTTAGTCATGATACATTCTCCAACCCTTaGGTTTCAAAGCCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: NLPSANQSREVLNLFSHDTFSNP*VSKPSC
Trigger: GCAGCTTGGCTTTGAAACGCAAGGGTTGGAGAATGT...ATCATGACTAAATAAGTTCAGGACTTCTCTGCTTTGGTTGGCAGAAGGTAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGATATCCTCAGAAATaGTCTCAGGAACTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: GPKRSSHVVSGNAEAVDCRYPQK*SQELQN
Trigger: ATTTTGAAGTTCCTGAGAGCATTTCTGAGGATATCT...ACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GGTCACTCAAACATCACACATAGAATCTATTTAATGAGGCTTTCCCATGTGAACTACACTCCTCAACTCTaGTTCTCCAGGAGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: GHSNITHRIYLMRLSHVNYTPQL*FSRSSD
Trigger: ATCACTGCTCCTGGAGAAGCAGAGTTGAGGAGTGTA...GTTCACATGGGAAAGCCTCATTAAATAGATTCTATGTGTGATGTTTGAGTGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TTAATTCTGGAAATGAAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTCACATGCCAGCTCACTaGCTCCTCTTTATAGCCACA +
Preference number: 4 (lower is better)
Translates to: LILEMKHLVPALPLVFYSHMPAH*LLFIAT
Trigger: TGTGGCTATAAAGAGGAGGCAGTGAGCTGGCATGTG...ACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTTCATTTCCAGAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGAGGCATTGTGCTGCATaGTTTCCAAGTATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: SHVVSGNAEAVDCRHYFQRHCAA*FPSISS
Trigger: TGAGGAAATACTTGGAAAGCATGCAGCACAATGCCT...CTGAAAATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CCTGGTATCTGTGGCATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAAGCTTTTGTAATCTTGTaGAGATTTGAGTTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: PGICGIAQGPNKAEISMKAFVIL*RFEFVL
Trigger: AAGCACAAACTCAAATCTGCACAAGATTACAAAAGC...TTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTATGCCACAGATACCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TTAATTCTGGAAATGAAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTGCAGGTTCCTTCTACTaGTCTCAGTGTGGTCTTGTC +
Preference number: 4 (lower is better)
Translates to: LILEMKHLVPALPLVFYSAGSFY*SQCGLV
Trigger: GACAAGACCACACTGAGAGCAGTAGAAGGAACCTGC...ACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTTCATTTCCAGAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AGGCCAGCTATTTTCATTGGTCACTCAAACATCACACATAGAATCTATTTAATGTGCAACTGCAGCCTCTaGCTCACAAGAGTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: RPAIFIGHSNITHRIYLMCNCSL*LTRVLL
Trigger: CAGCAGAACTCTTGTGAGCCAGAGGCTGCAGTTGCA...CATTAAATAGATTCTATGTGTGATGTTTGAGTGACCAATGAAAATAGCTGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CTAAACTTCCCTTCACAGATGAGGAAACTCATAAGTAGTGACTTGTTTGAAAACGCAAGAGGAGATCAGTaGCTTCCCAAGTCATCACAG +
Preference number: 4 (lower is better)
Translates to: LNFPSQMRKLISSDLFENARGDQ*LPKSSQ
Trigger: CTGTGATGACTTGGGAAGCCACTGATCTCCTCTTGC...GTTTTCAAACAAGTCACTACTTATGAGTTTCCTCATCTGTGAAGGGAAGTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CTAAACTTCCCTTCACAGATGAGGAAACTCATAAGTAGTGACTTGTTTGAAAACAGGCCTGCCACTGCATaGCAGTTTACAGCTAAAGAG +
Preference number: 4 (lower is better)
Translates to: LNFPSQMRKLISSDLFENRPATA*QFTAKE
Trigger: CTCTTTAGCTGTAAACTGCCATGCAGTGGCAGGCCT...GTTTTCAAACAAGTCACTACTTATGAGTTTCCTCATCTGTGAAGGGAAGTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TTAATTCTGGAAATGAAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTACCTGTGAACCTGGATaGGGTCATGCATGTAAGCAG +
Preference number: 4 (lower is better)
Translates to: LILEMKHLVPALPLVFYSTCEPG*GHACKQ
Trigger: CTGCTTACATGCATGACCCCATCCAGGTTCACAGGT...ACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTTCATTTCCAGAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATTTGTTTTTCGAGGGTTaGTTTTTAACCACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: AEAVDCRHYFQSLSWWLHLFFEG*FLTTSS
Trigger: TGAAGAAGTGGTTAAAAACCAACCCTCGAAAAACAA...ATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
3UTR CAA 72 bp TTCCCTTCACAGATGAGGAAACTCATAAGTAGTGACTaGTTTGAAAACACCCATGTAATTGGAAGCACGGGA +
Preference number: 4 (lower is better)
Translates to: FPSQMRKLISSD*FENTHVIGSTG
Trigger: TCCCGTGCTTCCAATTACATGGGTGTTTTCAAACAAGTCACTACTTATGAGTTTCCTCATCTGTGAAGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TTAATTCTGGAAATGAAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTAAAGCCACAGAACCTTaGTCTGCCTGCACTTCACAT +
Preference number: 4 (lower is better)
Translates to: LILEMKHLVPALPLVFYSKATEP*SACTSH
Trigger: ATGTGAAGTGCAGGCAGATCAAGGTTCTGTGGCTTT...ACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTTCATTTCCAGAATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CATGACTTAACCATACCCACGTCTTCACCATCCTCACTATATCACACTTGCACTAAAGCAGAGAAGTCCTaGACTTATTTAGTCATGATG +
Preference number: 4 (lower is better)
Translates to: HDLTIPTSSPSSLYHTCTKAEKS*TYLVMM
Trigger: CATCATGACTAAATAAGTTCAGGACTTCTCTGCTTT...AGTGCAAGTGTGATATAGTGAGGATGGTGAAGACGTGGGTATGGTTAAGTCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AATCTACCTTCTGCCAACCAAAGCAGAGAAGTCCTGAACTTATTTAGTCATGATGTGACCCAGAATAGTTaGGTTCAATCACCACAGGTA +
Preference number: 4 (lower is better)
Translates to: NLPSANQSREVLNLFSHDVTQNS*VQSPQV
Trigger: TACCTGTGGTGATTGAACTCAACTATTCTGGGTCAC...ATCATGACTAAATAAGTTCAGGACTTCTCTGCTTTGGTTGGCAGAAGGTAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GTTGTGAATGTATCTTGTGGTCCATCCAGAGACATGTCTAATCTGCAAGTATCTCTTGGAGTTTGGCTTTaGCTCTGGCTTAACTTACTT +
Preference number: 4 (lower is better)
Translates to: VVNVSCGPSRDMSNLQVSLGVWL*LWLNLL
Trigger: AAGTAAGTTAAGCCAGAGTCAAAGCCAAACTCCAAG...AGATACTTGCAGATTAGACATGTCTCTGGATGGACCACAAGATACATTCACAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp AGGCCAGCTATTTTCATTGGTCACTCAAACATCACACATAGAATCTATTTAATGGGTCCCCAAAGCACATaGCCAGTAGTTCTTTGCGAA +
Preference number: 4 (lower is better)
Translates to: RPAIFIGHSNITHRIYLMGPQST*PVVLCE
Trigger: TTCGCAAAGAACTACTGGGCATGTGCTTTGGGGACC...CATTAAATAGATTCTATGTGTGATGTTTGAGTGACCAATGAAAATAGCTGGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTAAACTTCCCTTCACAGATGAGGAAACTCATAAGTAGTGACTTGTTTGAAAACTTTGGCCAAGCTTGCTaGGTAACTGTCCAAGGACTT +
Preference number: 4 (lower is better)
Translates to: LNFPSQMRKLISSDLFENFGQAC*VTVQGL
Trigger: AAGTCCTTGGACAGTTACGCAGCAAGCTTGGCCAAA...GTTTTCAAACAAGTCACTACTTATGAGTTTCCTCATCTGTGAAGGGAAGTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GTTGTGAATGTATCTTGTGGTCCATCCAGAGACATGTCTAATCTGCAAGTATCTATTCTATCCAGATTGTaGTCTAATGGACAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: VVNVSCGPSRDMSNLQVSILSRL*SNGQGR
Trigger: TCTGCCCTGTCCATTAGAGCACAATCTGGATAGAAT...AGATACTTGCAGATTAGACATGTCTCTGGATGGACCACAAGATACATTCACAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GACTTGACTTTGCTAGTTATTAGAATCGGTATCCACAGGTCCTGCTCCCTAAATAAATATGGTTCTAGCTaGCAAGCATCCTTCAAGACT +
Preference number: 4 (lower is better)
Translates to: DLTLLVIRIGIHRSCSLNKYGSS*QASFKT
Trigger: AGTCTTGAAGGATGCTTGGCAGCTAGAACCATATTT...ATTTAGGGAGCAGGACCTGTGGATACCGATTCTAATAACTAGCAAAGTCAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TTAATTCTGGAAATGAAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTTACACTCCTCAACTCTaGTTCTCCAGGAGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: LILEMKHLVPALPLVFYSYTPQL*FSRSSD
Trigger: ATCACTGCTCCTGGAGAAGCAGAGTTGAGGAGTGTA...ACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTTCATTTCCAGAATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GGGAATATATATAGAAAACGTGAACCACACGCAGACGTAGGAATGCCATCCAGTGAGACATGTCTAATCTaGAAGTATCTAAGAGGCATA +
Preference number: 4 (lower is better)
Translates to: GNIYRKREPHADVGMPSSETCLI*KYLRGI
Trigger: TATGCCTCTTAGATACTTGCAGATTAGACATGTCTC...ACTGGATGGCATTCCTACGTCTGCGTGTGGTTCACGTTTTCTATATATATTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GGTCACTCAAACATCACACATAGAATCTATTTAATGAGGCTTTCCCATGTGAACATAAGACTAGCTCCTTaGTTTTCTCATCCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: GHSNITHRIYLMRLSHVNIRLAP*FSHPLG
Trigger: GCCAAGGGGATGAGAAAAGCAAGGAGCTAGTCTTAT...GTTCACATGGGAAAGCCTCATTAAATAGATTCTATGTGTGATGTTTGAGTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp CTAAACTTCCCTTCACAGATGAGGAAACTCATAAGTAGTGACTTGTTTGAAAACCTGTCGTTGCACAAATaGTTCCCGATAATACCGGTC +
Preference number: 4 (lower is better)
Translates to: LNFPSQMRKLISSDLFENLSLHK*FPIIPV
Trigger: GACCGGTATTATCGGGAACCATTTGTGCAACGACAG...GTTTTCAAACAAGTCACTACTTATGAGTTTCCTCATCTGTGAAGGGAAGTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATGAAATGCTGAAGCTGTaGACTGTAGACATTATTTTC +
Preference number: 4 (lower is better)
Translates to: RSSHVVSGNAEAVDCRHYEMLKL*TVDIIF
Trigger: GAAAATAATGTCTACAGTCCACAGCTTCAGCATTTC...ATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp TCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGGGCATATTGTCGGGATaGAAAATATTCAGGGAAATC +
Preference number: 4 (lower is better)
Translates to: SHVVSGNAEAVDCRHYFQGILSG*KIFREI
Trigger: GATTTCCCTGAATATTTTCCATCCCGACAATATGCC...CTGAAAATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTGGTTTCTCCCTTTTGGGCATATTGTCGGGATaGAAAATATTCAGGGAAATC +
Preference number: 4 (lower is better)
Translates to: KHLVPALPLVFYSGFSLLGILSG*KIFREI
Trigger: GATTTCCCTGAATATTTTCCATCCCGACAATATGCC...CAAAAGGGAGAAACCACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AAGGGTAATTCACTTTCTAGAACAGCTGCCTCTCAGCAACCAGCAAGATCTCCTTTGTTTTTCGAGGGTTaGTTTTTAACCACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: KGNSLSRTAASQQPARSPLFFEG*FLTTSS
Trigger: TGAAGAAGTGGTTAAAAACCAACCCTCGAAAAACAA...AGGAGATCTTGCTGGTTGCTGAGAGGCAGCTGTTCTAGAAAGTGAATTACCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGAAAGCAGAGAAGTCCTaGACTTATTTAGTCATGATG +
Preference number: 4 (lower is better)
Translates to: SHVVSGNAEAVDCRHYFQKAEKS*TYLVMM
Trigger: CATCATGACTAAATAAGTTCAGGACTTCTCTGCTTT...CTGAAAATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CTAAACTTCCCTTCACAGATGAGGAAACTCATAAGTAGTGACTTGTTTGAAAACCAGGCCCTGGGGATTTaGTCATCTTTGATAGTCATT +
Preference number: 4 (lower is better)
Translates to: LNFPSQMRKLISSDLFENQALGI*SSLIVI
Trigger: AATGACTATCAAAGATGATCAAATCCCCAGGGCCTG...GTTTTCAAACAAGTCACTACTTATGAGTTTCCTCATCTGTGAAGGGAAGTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp GGTCACTCAAACATCACACATAGAATCTATTTAATGAGGCTTTCCCATGTGAACATACCTCATCTTCCTTaGCCTATAAGACTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GHSNITHRIYLMRLSHVNIPHLP*PIRLAP
Trigger: AGGAGCTAGTCTTATAGGTCAAGGAAGATGAGGTAT...GTTCACATGGGAAAGCCTCATTAAATAGATTCTATGTGTGATGTTTGAGTGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTGTTTTACCTATCTCTaGTTTACAAATCCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: EAHMWSLEMLKLWTVDIICFTYL*FTNPEN
Trigger: GTTCTCAGGATTTGTAAAGCAGAGATAGGTAAAACA...AATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTAAACTTCCCTTCACAGATGAGGAAACTCATAAGTAGTGACTTGTTTGAAAACGTTTCAAAGCCAAGCTaGTGCACTCAAGAATGCCTA +
Preference number: 4 (lower is better)
Translates to: LNFPSQMRKLISSDLFENVSKPS*CTQECL
Trigger: TAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAAC...GTTTTCAAACAAGTCACTACTTATGAGTTTCCTCATCTGTGAAGGGAAGTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GTTGTGAATGTATCTTGTGGTCCATCCAGAGACATGTCTAATCTGCAAGTATCTAAATATGGTTCTAGCTaGCAAGCATCCTTCAAGACT +
Preference number: 4 (lower is better)
Translates to: VVNVSCGPSRDMSNLQVSKYGSS*QASFKT
Trigger: AGTCTTGAAGGATGCTTGGCAGCTAGAACCATATTT...AGATACTTGCAGATTAGACATGTCTCTGGATGGACCACAAGATACATTCACAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GTTGTGAATGTATCTTGTGGTCCATCCAGAGACATGTCTAATCTGCAAGTATCTTACTACCCAGGAAAATaGTTGCTGAGAGAAATGAAC +
Preference number: 4 (lower is better)
Translates to: VVNVSCGPSRDMSNLQVSYYPGK*LLREMN
Trigger: GTTCATTTCTCTCAGCAAGCATTTTCCTGGGTAGTA...AGATACTTGCAGATTAGACATGTCTCTGGATGGACCACAAGATACATTCACAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp GACTTGACTTTGCTAGTTATTAGAATCGGTATCCACAGGTCCTGCTCCCTAAATAGTCCGGTAAAACAGTaGTACGTCTTAAATGGATTT +
Preference number: 4 (lower is better)
Translates to: DLTLLVIRIGIHRSCSLNSPVKQ*YVLNGF
Trigger: AAATCCATTTAAGACGTACCACTGTTTTACCGGACT...ATTTAGGGAGCAGGACCTGTGGATACCGATTCTAATAACTAGCAAAGTCAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp AGGCCAGCTATTTTCATTGGTCACTCAAACATCACACATAGAATCTATTTAATGCTGCTTTACAAATCCTaGGAACACCAAAGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: RPAIFIGHSNITHRIYLMLLYKS*EHQRSE
Trigger: CTCTGACCTTTGGTGTTCTCAGGATTTGTAAAGCAG...CATTAAATAGATTCTATGTGTGATGTTTGAGTGACCAATGAAAATAGCTGGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TTAATTCTGGAAATGAAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTGCTGTATTTGTGCTATaGTTTGGAACGTTACACCAG +
Preference number: 4 (lower is better)
Translates to: LILEMKHLVPALPLVFYSAVFVL*FGTLHQ
Trigger: CTGGTGTAACGTTCCAAATCATAGCACAAATACAGC...ACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTTCATTTCCAGAATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp CTAAACTTCCCTTCACAGATGAGGAAACTCATAAGTAGTGACTTGTTTGAAAACATACCTCATCTTCCTTaGCCTATAAGACTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LNFPSQMRKLISSDLFENIPHLP*PIRLAP
Trigger: AGGAGCTAGTCTTATAGGTCAAGGAAGATGAGGTAT...GTTTTCAAACAAGTCACTACTTATGAGTTTCCTCATCTGTGAAGGGAAGTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR TCA 90 bp TTAATTCTGGAAATGAAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTGGACTGACTCACCTGTaGTTTGTGGTATTTCAAACT +
Preference number: 4 (lower is better)
Translates to: LILEMKHLVPALPLVFYSGLTHL*FVVFQT
Trigger: AGTTTGAAATACCACAAATCACAGGTGAGTCAGTCC...ACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTTCATTTCCAGAATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TTAATTCTGGAAATGAAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTATTCTATCCAGATTGTaGTCTAATGGACAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LILEMKHLVPALPLVFYSILSRL*SNGQGR
Trigger: TCTGCCCTGTCCATTAGAGCACAATCTGGATAGAAT...ACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTTCATTTCCAGAATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTAAACTTCCCTTCACAGATGAGGAAACTCATAAGTAGTGACTTGTTTGAAAACAATTCAAAACAAGAGTaGCCAGCCAGAGGCAAACAA +
Preference number: 4 (lower is better)
Translates to: LNFPSQMRKLISSDLFENNSKQE*PARGKQ
Trigger: TTGTTTGCCTCTGGCTGGGCACTCTTGTTTTGAATT...GTTTTCAAACAAGTCACTACTTATGAGTTTCCTCATCTGTGAAGGGAAGTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GTTGTGAATGTATCTTGTGGTCCATCCAGAGACATGTCTAATCTGCAAGTATCTGTCAAGCTGTATTTGTaGTATGATTTGGAACGTTAC +
Preference number: 4 (lower is better)
Translates to: VVNVSCGPSRDMSNLQVSVKLYL*YDLERY
Trigger: GTAACGTTCCAAATCATAGCACAAATACAGCTTGAC...AGATACTTGCAGATTAGACATGTCTCTGGATGGACCACAAGATACATTCACAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGGCAGATTTGAGTTTGTaGTTTGATGTTTTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: SHVVSGNAEAVDCRHYFQADLSL*FDVFKG
Trigger: TCCTTTGAAAACATCAAAGCACAAACTCAAATCTGC...CTGAAAATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AGGCCAGCTATTTTCATTGGTCACTCAAACATCACACATAGAATCTATTTAATGATGCATCTTGGTGGCTaGCATTCTATCCAGATTGTG +
Preference number: 4 (lower is better)
Translates to: RPAIFIGHSNITHRIYLMMHLGG*HSIQIV
Trigger: CACAATCTGGATAGAATGCCAGCCACCAAGATGCAT...CATTAAATAGATTCTATGTGTGATGTTTGAGTGACCAATGAAAATAGCTGGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp GTTGTGAATGTATCTTGTGGTCCATCCAGAGACATGTCTAATCTGCAAGTATCTGCTTTTGTAATCTTGTaGAGATTTGAGTTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: VVNVSCGPSRDMSNLQVSAFVIL*RFEFVL
Trigger: AAGCACAAACTCAAATCTGCACAAGATTACAAAAGC...AGATACTTGCAGATTAGACATGTCTCTGGATGGACCACAAGATACATTCACAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp CTAAACTTCCCTTCACAGATGAGGAAACTCATAAGTAGTGACTTGTTTGAAAACTACTACCCAGGAAAATaGTTGCTGAGAGAAATGAAC +
Preference number: 4 (lower is better)
Translates to: LNFPSQMRKLISSDLFENYYPGK*LLREMN
Trigger: GTTCATTTCTCTCAGCAAGCATTTTCCTGGGTAGTA...GTTTTCAAACAAGTCACTACTTATGAGTTTCCTCATCTGTGAAGGGAAGTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR GCA 90 bp TTAATTCTGGAAATGAAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTGCAGATTTGAGTTTGTaGTTTGATGTTTTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: LILEMKHLVPALPLVFYSADLSL*FDVFKG
Trigger: TCCTTTGAAAACATCAAAGCACAAACTCAAATCTGC...ACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTTCATTTCCAGAATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CCA 90 bp AGGCCAGCTATTTTCATTGGTCACTCAAACATCACACATAGAATCTATTTAATGTCTTATAGGCATATATaGCTAATCACAGCCATTCTC +
Preference number: 4 (lower is better)
Translates to: RPAIFIGHSNITHRIYLMSYRHI*LITAIL
Trigger: GAGAATGGCTGTGATTAGCCATATATGCCTATAAGA...CATTAAATAGATTCTATGTGTGATGTTTGAGTGACCAATGAAAATAGCTGGCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS GCA 90 bp TTGAGGCTCATGGTCAGTGCACCTCGGCGTGGGGTGGGCAGAGCATaGTGGACGACGAGGAGCGGCCGCCGCGGCAGCTCAGGCCCCGGC +
Preference number: 5 (lower is better)
Translates to: LRLMVSAPRRGVGRA*WTTRSGRRGSSGPG
Trigger: GCCGGGGCCTGAGCTGCCGCGGCGGCCGCTCCTCGTCGTCCAGCATGCTCTGCCCACCCCACGCCGAGGTGCACTGACCATGAGCCTCAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682931.1
CDS-3UTR CAA 90 bp CAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGGCACGGGGGTTAAGCTaGGCCCAGAAGGCGCCGAGG +
Preference number: 5 (lower is better)
Translates to: QGRGTGGDGNSSPGQPLRARGLS*AQKAPR
Trigger: CCTCGGCGCCTTCTGGGCCAAGCTTAACCCCCGTGC...CCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367836.5
CDS GCA 90 bp CCAGGCTCGGGGAGACAGCGCCCTGAGTCCCGGCTGGGAGAAGGCTaGTCACCTGGTCCTCACGGATTCCAGCCGAGGGGCGTGACCGCT +
Preference number: 5 (lower is better)
Translates to: PGSGRQRPESRLGEG*SPGPHGFQPRGVTA
Trigger: AGCGGTCACGCCCCTCGGCTGGAATCCGTGAGGACCAGGTGAGCAGCCTTCTCCCAGCCGGGACTCAGGGCGCTGTCTCCCCGAGCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367836.5
CDS CCA 90 bp GCAGCTGAGGGAGGAGTTGAGGCTCATGGTCAGTGCACCTCGGCGTaGGGTGGGCAGAGCATGCTGGACGACGAGGAGCGGCCGCCGCGG +
Preference number: 5 (lower is better)
Translates to: AAEGGVEAHGQCTSA*GGQSMLDDEERPPR
Trigger: CCGCGGCGGCCGCTCCTCGTCGTCCAGCATGCTCTGCCCACCCCACGCCGAGGTGCACTGACCATGAGCCTCAACTCCTCCCTCAGCTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682931.1
CDS-3UTR CAA 90 bp CGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCTGCAGTGCACCTTGCGTGCCTaGACCCTGGCCACGCGGAAG +
Preference number: 5 (lower is better)
Translates to: RGTGGDGNSSPGQPLRLQCTLRA*TLATRK
Trigger: CTTCCGCGTGGCCAGGGTCAAGGCACGCAAGGTGCA...CTGCAGCCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS TCA 90 bp GTTCTCCCCTTTCCAAGAACCAGCCGAATCTCCCTCCCGCAGATCTaGGGGGCAGAGCCGCCCATCCGGCGGCGCCGGGCCACTTCTGGG +
Preference number: 5 (lower is better)
Translates to: VLPFPRTSRISLPQI*GAEPPIRRRRATSG
Trigger: CCCAGAAGTGGCCCGGCGCCGCCGGATGGGCGGCTCTGCCCCTCAGATCTGCGGGAGGGAGATTCGGCTGGTTCTTGGAAAGGGGAGAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367836.5
CDS-3UTR CAA 90 bp GCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCGCTGCACCCCAGGCATaGTGCTGCATGCTTTCCAAG +
Preference number: 5 (lower is better)
Translates to: APKAAAQAVMGTPPRASLAAPQA*CCMLSK
Trigger: CTTGGAAAGCATGCAGCACAATGCCTGGGGTGCAGC...GAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGCTGCAGCTCTCAGGTTCATCCTaGGCTCTGCACAGCCACACC +
Preference number: 5 (lower is better)
Translates to: RGTGGDGNSSPGQPLRLQLSGSS*ALHSHT
Trigger: GGTGTGGCTGTGCAGAGCCAAGGATGAACCTGAGAG...CTGCAGCCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS TCA 90 bp GAGAAGGCTGCTCACCTGGTCCTCACGGATTCCAGCCGAGGGGCGTaGCCGCTTCTCCCCACACCCTTTGCCCTGAGCGGGACGTGGAGT +
Preference number: 5 (lower is better)
Translates to: EKAAHLVLTDSSRGA*PLLPTPFALSGTWS
Trigger: ACTCCACGTCCCGCTCAGGGCAAAGGGTGTGGGGAGAAGCGGTCACGCCCCTCGGCTGGAATCCGTGAGGACCAGGTGAGCAGCCTTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367836.5
CDS-3UTR CAA 90 bp TGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGGTGCCACAGTGCACCTaGCGTGCCTTGACCCTGGCC +
Preference number: 5 (lower is better)
Translates to: CVWPAVHSDMLPRPRHRRVPQCT*RALTLA
Trigger: GGCCAGGGTCAAGGCACGCAAGGTGCACTGTGGCAC...CCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGGGGGTTCTGCATATATaGTGGGTAGCATCCCTGCCC +
Preference number: 5 (lower is better)
Translates to: QGRGTGGDGNSSPGQPLRGVLHI*WVASLP
Trigger: GGGCAGGGATGCTACCCACAATATATGCAGAACCCC...CCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CCTGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGTGCACCTTGCGTGCCTaGACCCTGGCCACGCGGAAG +
Preference number: 5 (lower is better)
Translates to: PGCFLCGPVLELRVPHCPCTLRA*TLATRK
Trigger: CTTCCGCGTGGCCAGGGTCAAGGCACGCAAGGTGCA...CGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCCAAAGCCACAGAACCTaGATCTGCCTGCACTTCACA +
Preference number: 5 (lower is better)
Translates to: APKAAAQAVMGTPPRASLQSHRT*ICLHFT
Trigger: TGTGAAGTGCAGGCAGATCAAGGTTCTGTGGCTTTG...GAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGGCTGCACCCCAGGCATaGTGCTGCATGCTTTCCAAG +
Preference number: 5 (lower is better)
Translates to: GQLYTVTCSQGRGTGGDGAAPQA*CCMLSK
Trigger: CTTGGAAAGCATGCAGCACAATGCCTGGGGTGCAGC...CCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCATCCTGGTATCGCCTTaGCTGCTCACCTTTCATTCA +
Preference number: 5 (lower is better)
Translates to: APKAAAQAVMGTPPRASLILVSP*LLTFHS
Trigger: TGAATGAAAGGTGAGCAGCAAAGGCGATACCAGGAT...GAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367835.1
ENST00000537209.5
CDS-3UTR CAA 90 bp CCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCCTCTCAGGTTCATCCTaGGCTCTGCACAGCCACACC +
Preference number: 5 (lower is better)
Translates to: PVCGQLYTVTCSQGRGTGLSGSS*ALHSHT
Trigger: GGTGTGGCTGTGCAGAGCCAAGGATGAACCTGAGAG...GCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS GCA 90 bp TTGAGGCTCATGGTCAGTGCACCTCGGCGTGGGGTGGGCAGAGCATaGTGGACGACTTTCATTCATCCAGCCGACGGGCACGAGCATCCA +
Preference number: 5 (lower is better)
Translates to: LRLMVSAPRRGVGRA*WTTFIHPADGHEHP
Trigger: TGGATGCTCGTGCCCGTCGGCTGGATGAATGAAAGTCGTCCAGCATGCTCTGCCCACCCCACGCCGAGGTGCACTGACCATGAGCCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271357.9
CDS GCA 90 bp TTGAGGCTCATGGTCAGTGCACCTCGGCGTGGGGTGGGCAGAGCATaGTGGACGACTGTAATCCCGGCTATTCAGGAGGCTGAGGCAGGA +
Preference number: 5 (lower is better)
Translates to: LRLMVSAPRRGVGRA*WTTVIPAIQEAEAG
Trigger: TCCTGCCTCAGCCTCCTGAATAGCCGGGATTACAGTCGTCCAGCATGCTCTGCCCACCCCACGCCGAGGTGCACTGACCATGAGCCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367835.1
ENST00000367838.5
CDS GCA 90 bp TCCTCGGAACCCAAACAGAGAGCTCGCAGCCCTCTGACCACACAGTaGTCCTTCACCTCTCAGAGGACGCACAGTGCACCAGGCCTCTCG +
Preference number: 5 (lower is better)
Translates to: SSEPKQRARSPLTTQ*SFTSQRTHSAPGLS
Trigger: CGAGAGGCCTGGTGCACTGTGCGTCCTCTGAGAGGTGAAGGAGCACTGTGTGGTCAGAGGGCTGCGAGCTCTCTGTTTGGGTTCCGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537209.5
CDS CCA 90 bp AGGCTCATGGTCAGTGCACCTCGGCGTGGGGTGGGCAGAGCATGCTaGACGACTTTCATTCATCCAGCCGACGGGCACGAGCATCCATCT +
Preference number: 5 (lower is better)
Translates to: RLMVSAPRRGVGRAC*TTFIHPADGHEHPS
Trigger: AGATGGATGCTCGTGCCCGTCGGCTGGATGAATGAAAGTCGTCCAGCATGCTCTGCCCACCCCACGCCGAGGTGCACTGACCATGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271357.9
CDS CCA 90 bp GCAGCTGAGGGAGGAGTTGAGGCTCATGGTCAGTGCACCTCGGCGTaGGGTGGGCAGAGCATGCTGGACGACTTTCATTCATCCAGCCGA +
Preference number: 5 (lower is better)
Translates to: AAEGGVEAHGQCTSA*GGQSMLDDFHSSSR
Trigger: TCGGCTGGATGAATGAAAGTCGTCCAGCATGCTCTGCCCACCCCACGCCGAGGTGCACTGACCATGAGCCTCAACTCCTCCCTCAGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271357.9
CDS CCA 90 bp CCGCACAGTCCCATTCTCCTCCTCCAGTCCCGCCGTGGACGATCCTaGTATCGCCTTTGCTGCTCACCTTTCATTCATCCAGCCGACGGG +
Preference number: 5 (lower is better)
Translates to: PHSPILLLQSRRGRS*YRLCCSPFIHPADG
Trigger: CCCGTCGGCTGGATGAATGAAAGGTGAGCAGCAAAGGCGATACCAGGATCGTCCACGGCGGGACTGGAGGAGGAGAATGGGACTGTGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367835.1
ENST00000537209.5
CDS CCA 90 bp GCAGCTGAGGGAGGAGTTGAGGCTCATGGTCAGTGCACCTCGGCGTaGGGTGGGCAGAGCATGCTGGACGACTGTAATCCCGGCTATTCA +
Preference number: 5 (lower is better)
Translates to: AAEGGVEAHGQCTSA*GGQSMLDDCNPGYS
Trigger: TGAATAGCCGGGATTACAGTCGTCCAGCATGCTCTGCCCACCCCACGCCGAGGTGCACTGACCATGAGCCTCAACTCCTCCCTCAGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367835.1
ENST00000367838.5
CDS-3UTR CAA 90 bp CAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACCAGCTGAGGGAGGAGTaGAGGCTCATGGTCAGTGCA +
Preference number: 5 (lower is better)
Translates to: QLYTVTCSQGRGTGGDGNQLREE*RLMVSA
Trigger: TGCACTGACCATGAGCCTCAACTCCTCCCTCAGCTG...GTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367838.5
ENST00000537209.5
CDS-3UTR CAA 90 bp GCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGGTGCCACAGTGCACCTaGCGTGCCTTGACCCTGGCC +
Preference number: 5 (lower is better)
Translates to: ARINHVEAPGRSRVIRKKVPQCT*RALTLA
Trigger: GGCCAGGGTCAAGGCACGCAAGGTGCACTGTGGCAC...CTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCGGCAGCTTCTTTGATTaGTTCCACTTCATCCTCAAA +
Preference number: 5 (lower is better)
Translates to: APKAAAQAVMGTPPRASLGSFFD*FHFILK
Trigger: TTTGAGGATGAAGTGGAACAAATCAAAGAAGCTGCC...GAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTCCCCGGGCCAGCCTCTCAGGTATAAGACTAGCTCCTaGCTTTTCTCATCCCCTTGG +
Preference number: 5 (lower is better)
Translates to: QGRGTGGDGNSSPGQPLRYKTSS*LFSSPW
Trigger: CCAAGGGGATGAGAAAAGCAAGGAGCTAGTCTTATA...CCTGAGAGGCTGGCCCGGGGAGGAGTTCCCATCACCGCCTGTGCCGCGGCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp TCCCTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCGCTCTCAGTGTGGTCTaGTCTGCCAGGCCTGTGATT +
Preference number: 5 (lower is better)
Translates to: SLLAPAGGATEDRSEALCALSVV*SARPVI
Trigger: AATCACAGGCCTGGCAGACAAGACCACACTGAGAGC...GCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS TCA 90 bp GTTGGCCGAGTAGACCACACCCTGAAAGGCATTCCTCCTGCTGCCTaGAGAGGAGGTGGAGGTGCTGGAGTTCTTCCTCCCGGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: VGRVDHTLKGIPPAA*RGGGGAGVLPPGPL
Trigger: CAGAGGACCGGGAGGAAGAACTCCAGCACCTCCACCTCCTCTTCAGGCAGCAGGAGGAATGCCTTTCAGGGTGTGGTCTACTCGGCCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000493800.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS GCA 90 bp AGCATCCTCCTCCACGATGACGACTGTGCCACAGTGCACCTTGCGTaGCTTGACCCTGGCCACGCGGAAGATGAAGCCATAGCACACCAG +
Preference number: 5 (lower is better)
Translates to: SILLHDDDCATVHLA*LDPGHAEDEAIAHQ
Trigger: CTGGTGTGCTATGGCTTCATCTTCCGCGTGGCCAGGGTCAAGGCACGCAAGGTGCACTGTGGCACAGTCGTCATCGTGGAGGAGGATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000493800.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS GCA 90 bp CACCCTGAAAGGCATTCCTCCTGCTGCCTGAAGAGGAGGTGGAGGTaGTGGAGTTCTTCCTCCCGGTCCTCTGAGCATCCTCCTCCACGA +
Preference number: 5 (lower is better)
Translates to: HPERHSSCCLKRRWR*WSSSSRSSEHPPPR
Trigger: TCGTGGAGGAGGATGCTCAGAGGACCGGGAGGAAGAACTCCAGCACCTCCACCTCCTCTTCAGGCAGCAGGAGGAATGCCTTTCAGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000493800.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS GCA 90 bp CTCTGCTCGGCAGCTAAAACATCTCCTTCTTCGATGCTCTGCAACTaGAGCCTCTGGCTCACAAGAGTTCTGCTGCCTCGGCGGCCCCCG +
Preference number: 5 (lower is better)
Translates to: LCSAAKTSPSSMLCN*SLWLTRVLLPRRPP
Trigger: CGGGGGCCGCCGAGGCAGCAGAACTCTTGTGAGCCAGAGGCTGCAGTTGCAGAGCATCGAAGAAGGAGATGTTTTAGCTGCCGAGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000478868.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS GCA 90 bp CTCCTCCTCCAGTCCCGCCGTGGACGATCCTGGTATCGCCTTTGCTaGTCACCTTTCATTCATCCAGCCGACGGGCACGAGCATCCATCT +
Preference number: 5 (lower is better)
Translates to: LLLQSRRGRSWYRLC*SPFIHPADGHEHPS
Trigger: AGATGGATGCTCGTGCCCGTCGGCTGGATGAATGAAAGGTGAGCAGCAAAGGCGATACCAGGATCGTCCACGGCGGGACTGGAGGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367835.1
ENST00000537209.5
CDS GCA 90 bp CCAGGCCAACAGACGTTCTCATCCCATATGCCTTTGTCCAAAGGTTaGACGGGGGTTAAGCTTGGCCCAGAAGGCGCCGAGGGCTGGTCG +
Preference number: 5 (lower is better)
Translates to: PGQQTFSSHMPLSKG*TGVKLGPEGAEGWS
Trigger: CGACCAGCCCTCGGCGCCTTCTGGGCCAAGCTTAACCCCCGTGCAACCTTTGGACAAAGGCATATGGGATGAGAACGTCTGTTGGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367836.5
CDS GCA 90 bp TCCTCGGAACCCAAACAGAGAGCTCGCAGCCCTCTGACCACACAGTaGTCCTTCACCTCTCAGAGGACGCACAGTGCACCAGGCCAACAG +
Preference number: 5 (lower is better)
Translates to: SSEPKQRARSPLTTQ*SFTSQRTHSAPGQQ
Trigger: CTGTTGGCCTGGTGCACTGTGCGTCCTCTGAGAGGTGAAGGAGCACTGTGTGGTCAGAGGGCTGCGAGCTCTCTGTTTGGGTTCCGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367836.5
CDS CCA 90 bp CTGTCTTGTTCCAGAGTCCATAGATCAGGGGGTGGCAGACAGCGCTaGCAAAGGACAGCCATGTGGCCCAAGTCTCCAGGCTCGGGGAGA +
Preference number: 5 (lower is better)
Translates to: LSCSRVHRSGGGRQR*QRTAMWPKSPGSGR
Trigger: TCTCCCCGAGCCTGGAGACTTGGGCCACATGGCTGTCCTTTGCCAGCGCTGTCTGCCACCCCCTGATCTATGGACTCTGGAACAAGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000493800.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS CCA 90 bp CTCAGGCCTTCCCTGTTCCCGTTCCTCCGCCCCAGTTCCAGCCGCTaGGACGTCGCCTTTTCCATGTCTCTCTCCATCACACAGACACTT +
Preference number: 5 (lower is better)
Translates to: LRPSLFPFLRPSSSR*DVAFSMSLSITQTL
Trigger: AAGTGTCTGTGTGATGGAGAGAGACATGGAAAAGGCGACGTCCCAGCGGCTGGAACTGGGGCGGAGGAACGGGAACAGGGAAGGCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367835.1
ENST00000537209.5
CDS-3UTR CAA 90 bp CTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCTGCCCCTCATGCATCTaGGTGGCTGGCATTCTATCC +
Preference number: 5 (lower is better)
Translates to: LYTVTCSQGRGTGGDGNSCPSCI*VAGILS
Trigger: GGATAGAATGCCAGCCACCAAGATGCATGAGGGGCA...GGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GGAGGAAATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCCTAGCCAGGTGGTCCTaGGTCACCAAGGCCGTGGAC +
Preference number: 5 (lower is better)
Translates to: GGNDACGGLLPSPSSLVLLARWS*VTKAVD
Trigger: GTCCACGGCCTTGGTGACCAAGGACCACCTGGCTAG...GAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCATTTCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS TCA 90 bp GGACGCACAGTGCACCAGGCCTCTCGGCTCGCCCCACTTTTCTCCTaGAAACCTTTGTGGTGCCTAACTCAGGCCTTCCCTGTTCCCGTT +
Preference number: 5 (lower is better)
Translates to: GRTVHQASRLAPLFS*KPLWCLTQAFPVPV
Trigger: AACGGGAACAGGGAAGGCCTGAGTTAGGCACCACAAAGGTTTTCAGGAGAAAAGTGGGGCGAGCCGAGAGGCCTGGTGCACTGTGCGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537209.5
CDS GCA 90 bp ATTCTCCTCCTCCAGTCCCGCCGTGGACGATCCTGGTATCGCCTTTaGTGCTCACCTTTCATTCATCCAGCCGACGGGCACGAGCATCCA +
Preference number: 5 (lower is better)
Translates to: ILLLQSRRGRSWYRL*CSPFIHPADGHEHP
Trigger: TGGATGCTCGTGCCCGTCGGCTGGATGAATGAAAGGTGAGCAGCAAAGGCGATACCAGGATCGTCCACGGCGGGACTGGAGGAGGAGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367835.1
ENST00000537209.5
CDS CCA 90 bp AGACCACACCCTGAAAGGCATTCCTCCTGCTGCCTGAAGAGGAGGTaGAGGTGCTGGAGTTCTTCCTCCCGGTCCTCTGAGCATCCTCCT +
Preference number: 5 (lower is better)
Translates to: RPHPERHSSCCLKRR*RCWSSSSRSSEHPP
Trigger: AGGAGGATGCTCAGAGGACCGGGAGGAAGAACTCCAGCACCTCCACCTCCTCTTCAGGCAGCAGGAGGAATGCCTTTCAGGGTGTGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000493800.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS-3UTR CAA 90 bp CTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCGCCACACACATCCATTaGAACTCGTCAAACTCCACG +
Preference number: 5 (lower is better)
Translates to: LLAPAGGATEDRSEALCSATHIH*NSSNST
Trigger: CGTGGAGTTTGACGAGTTCAAATGGATGTGTGTGGC...GGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGTGCACCTTGCGTGCCTaGACCCTGGCCACGCGGAAG +
Preference number: 5 (lower is better)
Translates to: KKCCVILHSTLGRVLLLRCTLRA*TLATRK
Trigger: CTTCCGCGTGGCCAGGGTCAAGGCACGCAAGGTGCA...CCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGGTGCCACAGTGCACCTaGCGTGCCTTGACCCTGGCC +
Preference number: 5 (lower is better)
Translates to: KKCCVILHSTLGRVLLLRVPQCT*RALTLA
Trigger: GGCCAGGGTCAAGGCACGCAAGGTGCACTGTGGCAC...CCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGATGCCCAGTAGTTCTTaGCGAACTGTCTTGTTCCAG +
Preference number: 5 (lower is better)
Translates to: GQLYTVTCSQGRGTGGDGMPSSS*RTVLFQ
Trigger: CTGGAACAAGACAGTTCGCAAAGAACTACTGGGCAT...CCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp TCCCTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCAGGTCTGTGATCCTGTaGGAAATGCTGAAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: SLLAPAGGATEDRSEALCRSVIL*EMLKSL
Trigger: CAGGCTCTTCAGCATTTCCAACAGGATCACAGACCT...GCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GATGGGGTCATGCATGTAAGCAGGCTAGCCAGGTGGTCCTTGGTCACCAAGGCCCTCTCAGGTTCATCCTaGGCTCTGCACAGCCACACC +
Preference number: 5 (lower is better)
Translates to: DGVMHVSRLARWSLVTKALSGSS*ALHSHT
Trigger: GGTGTGGCTGTGCAGAGCCAAGGATGAACCTGAGAG...GGCCTTGGTGACCAAGGACCACCTGGCTAGCCTGCTTACATGCATGACCCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS TCA 90 bp CCGTGTAGCCAGGCTCCCGGTGCCAAGCAGCCACACACATCCATTTaGACTCGTCAAACTCCACGGATGACCAACCAAACAGGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: PCSQAPGAKQPHTSI*TRQTPRMTNQTGVA
Trigger: TGCCACCCCTGTTTGGTTGGTCATCCGTGGAGTTTGACGAGTTCAAATGGATGTGTGTGGCTGCTTGGCACCGGGAGCCTGGCTACACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000493800.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS GCA 90 bp GGGTGGCAGGCAGCCGATGAGCGAGTGAAGCCAGATGTAGACAAGTaGCATCACAGCCCGGTTCCCTGTGATCTTCATGGGGTACACCAT +
Preference number: 5 (lower is better)
Translates to: GWQAADERVKPDVDK*HHSPVPCDLHGVHH
Trigger: ATGGTGTACCCCATGAAGATCACAGGGAACCGGGCTGTGATGGCACTTGTCTACATCTGGCTTCACTCGCTCATCGGCTGCCTGCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000493800.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS GCA 90 bp CTGCTCACCTTTCATTCATCCAGCCGACGGGCACGAGCATCCATCTaGCTTCTGCCAGGCTCTGTCCCGGGCTCTGTTAATACCACAGTG +
Preference number: 5 (lower is better)
Translates to: LLTFHSSSRRARASI*LLPGSVPGSVNTTV
Trigger: CACTGTGGTATTAACAGAGCCCGGGACAGAGCCTGGCAGAAGGCAGATGGATGCTCGTGCCCGTCGGCTGGATGAATGAAAGGTGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367835.1
ENST00000537209.5
CDS GCA 90 bp ACACAGCGAACAAAGGGCAGGGCTGAGACTCACACCAGATCTGTGTaGCCCGAAGCCCATGCTCTTTCTTCTGCCTACAGTGCTGTCCCC +
Preference number: 5 (lower is better)
Translates to: TQRTKGRAETHTRSV*PEAHALSSAYSAVP
Trigger: GGGGACAGCACTGTAGGCAGAAGAAAGAGCATGGGCTTCGGGGCACACAGATCTGGTGTGAGTCTCAGCCCTGCCCTTTGTTCGCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478868.1
CDS GCA 90 bp CCCTCTTCTCCCGTTCATCCAAACCCATCATCAAGTGGAGCTGACTaGGCCGCAGCACGTGCCCAAGAAACACCCGCCTGTCATCCTGTT +
Preference number: 5 (lower is better)
Translates to: PSSPVHPNPSSSGAD*AAARAQETPACHPV
Trigger: AACAGGATGACAGGCGGGTGTTTCTTGGGCACGTGCTGCGGCGCAGTCAGCTCCACTTGATGATGGGTTTGGATGAACGGGAGAAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478868.1
CDS-3UTR CAA 90 bp TGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCAAGGAGGGCAGAGAAGTaGCACCACACTACACCAAAG +
Preference number: 5 (lower is better)
Translates to: WVLSLRTSPRTEGPTLPARRAEK*HHTTPK
Trigger: CTTTGGTGTAGTGTGGTGCAACTTCTCTGCCCTCCT...TGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
CDS-3UTR CAA 90 bp ATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCTGTTGCACCTTGCGTGCCTaGACCCTGGCCACGCGGAAG +
Preference number: 5 (lower is better)
Translates to: INHVEAPGRSRVIRKKCCCTLRA*TLATRK
Trigger: CTTCCGCGTGGCCAGGGTCAAGGCACGCAAGGTGCA...ACAGCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp TTCCTGGCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACGTGCCACAGTGCACCTaGCGTGCCTTGACCCTGGCC +
Preference number: 5 (lower is better)
Translates to: FLAVLGTTVPFSPVKQWYVPQCT*RALTLA
Trigger: GGCCAGGGTCAAGGCACGCAAGGTGCACTGTGGCAC...GTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp TGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGAAGTCCTCTGTCGTaGCACAAATGGTTCCCGATA +
Preference number: 5 (lower is better)
Translates to: CGQLYTVTCSQGRGTGGDGSPLS*HKWFPI
Trigger: TATCGGGAACCATTTGTGCAACGACAGAGGACTTCC...ATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTAGGTCTGTGATCCTGTaGGAAATGCTGAAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: RVPHCPHQPCRGTRTVACRSVIL*EMLKSL
Trigger: CAGGCTCTTCAGCATTTCCAACAGGATCACAGACCT...ACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp TGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTCCTCCCCAAATAAGTaGATTTTGGCTTCGGCCTCA +
Preference number: 5 (lower is better)
Translates to: CVWPAVHSDMLPRPRHRRSSPNK*ILASAS
Trigger: TGAGGCCGAAGCCAAAATCAACTTATTTGGGGAGGA...CCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCATTTCCTGGCTGTGCTaGGCACTACAGTCCCATTCA +
Preference number: 5 (lower is better)
Translates to: LYTVTCSQGRGTGGDGNSISWLC*ALQSHS
Trigger: TGAATGGGACTGTAGTGCCAAGCACAGCCAGGAAAT...GGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTGGCATTCTATCCAGATaGTGCTCTAATGGACAGGGC +
Preference number: 5 (lower is better)
Translates to: RVPHCPHQPCRGTRTVACGILSR*CSNGQG
Trigger: GCCCTGTCCATTAGAGCACAATCTGGATAGAATGCC...ACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCACCAGCAAGATCTCCTaGGAATCTACCTTCTGCCAA +
Preference number: 5 (lower is better)
Translates to: LLAPAGGATEDRSEALCSTSKIS*ESTFCQ
Trigger: TTGGCAGAAGGTAGATTCCAAGGAGATCTTGCTGGT...GGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp TCCCTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCCCAGGCCCTGGGGATTaGATCATCTTTGATAGTCAT +
Preference number: 5 (lower is better)
Translates to: SLLAPAGGATEDRSEALCPGPGD*IIFDSH
Trigger: ATGACTATCAAAGATGATCAAATCCCCAGGGCCTGG...GCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCCCAGGCCCTGGGGATTaGATCATCTTTGATAGTCAT +
Preference number: 5 (lower is better)
Translates to: LLAPAGGATEDRSEALCSPGPGD*IIFDSH
Trigger: ATGACTATCAAAGATGATCAAATCCCCAGGGCCTGG...GGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AGAGCTGGGCCAATAACCCAGGTTGCTGGCTGTGGGTCCAGGGCTGCTTCTATCGGGGTTCTGCATATATaGTGGGTAGCATCCCTGCCC +
Preference number: 5 (lower is better)
Translates to: RAGPITQVAGCGSRAASIGVLHI*WVASLP
Trigger: GGGCAGGGATGCTACCCACAATATATGCAGAACCCC...GATAGAAGCAGCCCTGGACCCACAGCCAGCAACCTGGGTTATTGGCCCAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp ATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCCCATGCCGCTCTCAGTGTGGTCTaGTCTGCCAGGCCTGTGATT +
Preference number: 5 (lower is better)
Translates to: MMHVGVSFQALRLWSSHAALSVV*SARPVI
Trigger: AATCACAGGCCTGGCAGACAAGACCACACTGAGAGC...GGCATGGGAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS TCA 90 bp GAAACGCGACACGGGGGAAACGCAACACAGGGAAAACGCGACAGGTaGGAGGCTTATAAAGCACGCAGGTTACCTGAGTCCTGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: ETRHGGNATQGKRDR*EAYKARRLPESWEQ
Trigger: CTGCTCCCAGGACTCAGGTAACCTGCGTGCTTTATAAGCCTCTCACCTGTCGCGTTTTCCCTGTGTTGCGTTTCCCCCGTGTCGCGTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493800.1
CDS GCA 90 bp CCTCATCTCTGCTCGGCAGCTAAAACATCTCCTTCTTCGATGCTCTaGAACTGCAGCCTCTGGCTCACAAGAGTTCTGCTGCCTCGGCGG +
Preference number: 5 (lower is better)
Translates to: PHLCSAAKTSPSSML*NCSLWLTRVLLPRR
Trigger: CCGCCGAGGCAGCAGAACTCTTGTGAGCCAGAGGCTGCAGTTGCAGAGCATCGAAGAAGGAGATGTTTTAGCTGCCGAGCAGAGATGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000478868.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS GCA 90 bp ACAGTGCTGTCCCCTCACTCCTTGCGCCGGGGCACCTTCCACGTATaGTTCAGCTTTCGACATCGCATGCTCAGAGCAGTCTCTCTAACT +
Preference number: 5 (lower is better)
Translates to: TVLSPHSLRRGTFHV*FSFRHRMLRAVSLT
Trigger: AGTTAGAGAGACTGCTCTGAGCATGCGATGTCGAAAGCTGAAGCATACGTGGAAGGTGCCCCGGCGCAAGGAGTGAGGGGACAGCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478868.1
CDS-3UTR CAA 90 bp TGCTCCTTCCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGCCACACACATCCATTaGAACTCGTCAAACTCCACG +
Preference number: 5 (lower is better)
Translates to: CSFPVCGQLYTVTCSQGRATHIH*NSSNST
Trigger: CGTGGAGTTTGACGAGTTCAAATGGATGTGTGTGGC...GCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGGAAGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTATGCCCAGTAGTTCTTaGCGAACTGTCTTGTTCCAG +
Preference number: 5 (lower is better)
Translates to: RVPHCPHQPCRGTRTVACMPSSS*RTVLFQ
Trigger: CTGGAACAAGACAGTTCGCAAAGAACTACTGGGCAT...ACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp TGCTCCTTCCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCAGGTCTGTGATCCTGTaGGAAATGCTGAAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: CSFPVCGQLYTVTCSQGRRSVIL*EMLKSL
Trigger: CAGGCTCTTCAGCATTTCCAACAGGATCACAGACCT...GCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGGAAGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp TGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGCCAAATAAGTTGATTTaGGCTTCGGCCTCAATGGCT +
Preference number: 5 (lower is better)
Translates to: CVWPAVHSDMLPRPRHRRPNKLI*ASASMA
Trigger: AGCCATTGAGGCCGAAGCCAAAATCAACTTATTTGG...CCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp TCCCTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCCCAAATAAGTTGATTTaGGCTTCGGCCTCAATGGCT +
Preference number: 5 (lower is better)
Translates to: SLLAPAGGATEDRSEALCPNKLI*ASASMA
Trigger: AGCCATTGAGGCCGAAGCCAAAATCAACTTATTTGG...GCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp TGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCAATTTCCTGGCTGTGCTaGGCACTACAGTCCCATTCA +
Preference number: 5 (lower is better)
Translates to: WVLSLRTSPRTEGPTLPAISWLC*ALQSHS
Trigger: TGAATGGGACTGTAGTGCCAAGCACAGCCAGGAAAT...TGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp TGCTCCTTCCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCCAAAGCCACAGAACCTaGATCTGCCTGCACTTCACA +
Preference number: 5 (lower is better)
Translates to: CSFPVCGQLYTVTCSQGRQSHRT*ICLHFT
Trigger: TGTGAAGTGCAGGCAGATCAAGGTTCTGTGGCTTTG...GCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGGAAGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GGAGGAAATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCTGCCCCTCATGCATCTaGGTGGCTGGCATTCTATCC +
Preference number: 5 (lower is better)
Translates to: GGNDACGGLLPSPSSLVLCPSCI*VAGILS
Trigger: GGATAGAATGCCAGCCACCAAGATGCATGAGGGGCA...GAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCATTTCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACAACATTCTCCAACCCTaGCGTTTCAAAGCCAAGCTG +
Preference number: 5 (lower is better)
Translates to: QLYTVTCSQGRGTGGDGNNILQP*RFKAKL
Trigger: CAGCTTGGCTTTGAAACGCAAGGGTTGGAGAATGTT...GTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCAACATTCTCCAACCCTaGCGTTTCAAAGCCAAGCTG +
Preference number: 5 (lower is better)
Translates to: LYTVTCSQGRGTGGDGNSNILQP*RFKAKL
Trigger: CAGCTTGGCTTTGAAACGCAAGGGTTGGAGAATGTT...GGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGAGACACAGGACTGAGTaGTTTAAGCTAACGAGTAGC +
Preference number: 5 (lower is better)
Translates to: PCVWPAVHSDMLPRPRHRRHRTE*FKLTSS
Trigger: GCTACTCGTTAGCTTAAACAACTCAGTCCTGTGTCT...CCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CGTTTCAAAGCCAAGCTGCTGCACTCAAGAATGCCTACACCTAACCAGCAACCCCTAGCCAGGTGGTCCTaGGTCACCAAGGCCGTGGAC +
Preference number: 5 (lower is better)
Translates to: RFKAKLLHSRMPTPNQQPLARWS*VTKAVD
Trigger: GTCCACGGCCTTGGTGACCAAGGACCACCTGGCTAG...GGGTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AGAGCTGGGCCAATAACCCAGGTTGCTGGCTGTGGGTCCAGGGCTGCTTCTATCGGCACTAGATGGCCCTaGTCTTACACTCCTCAACTC +
Preference number: 5 (lower is better)
Translates to: RAGPITQVAGCGSRAASIGTRWP*SYTPQL
Trigger: GAGTTGAGGAGTGTAAGACAAGGGCCATCTAGTGCC...GATAGAAGCAGCCCTGGACCCACAGCCAGCAACCTGGGTTATTGGCCCAGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp TCCCTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCAAGAATCAAGGAACATaGGCACTAGATGGCCCTTGT +
Preference number: 5 (lower is better)
Translates to: SLLAPAGGATEDRSEALCKNQGT*ALDGPC
Trigger: ACAAGGGCCATCTAGTGCCAATGTTCCTTGATTCTT...GCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTCCAAGAATCAAGGAACATaGGCACTAGATGGCCCTTGT +
Preference number: 5 (lower is better)
Translates to: LLAPAGGATEDRSEALCSKNQGT*ALDGPC
Trigger: ACAAGGGCCATCTAGTGCCAATGTTCCTTGATTCTT...GGAGCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp TGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGAAGAATCAAGGAACATaGGCACTAGATGGCCCTTGT +
Preference number: 5 (lower is better)
Translates to: CVWPAVHSDMLPRPRHRRKNQGT*ALDGPC
Trigger: ACAAGGGCCATCTAGTGCCAATGTTCCTTGATTCTT...CCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AGAGCTGGGCCAATAACCCAGGTTGCTGGCTGTGGGTCCAGGGCTGCTTCTATCCCCCTTGGCCAAGACTaGGAGTTTGGCTTTGACTCT +
Preference number: 5 (lower is better)
Translates to: RAGPITQVAGCGSRAASIPLGQD*EFGFDS
Trigger: AGAGTCAAAGCCAAACTCCAAGTCTTGGCCAAGGGG...GATAGAAGCAGCCCTGGACCCACAGCCAGCAACCTGGGTTATTGGCCCAGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS TCA 90 bp CCAAGCAGCCACACACATCCATTTGAACTCGTCAAACTCCACGGATaGCCAACCAAACAGGGGTGGCAGGCAGCCGATGAGCGAGTGAAG +
Preference number: 5 (lower is better)
Translates to: PSSHTHPFELVKLHG*PTKQGWQAADERVK
Trigger: CTTCACTCGCTCATCGGCTGCCTGCCACCCCTGTTTGGTTGGTCATCCGTGGAGTTTGACGAGTTCAAATGGATGTGTGTGGCTGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000493800.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS GCA 90 bp GGAGGGCAGAGAAGTTGCACCACACTACACCAAAGATCCATTCCCTaGGGATGGAGCTCGTCACCACAAAAGGCAGCACCAACACGGACA +
Preference number: 5 (lower is better)
Translates to: GGQRSCTTLHQRSIP*GWSSSPQKAAPTRT
Trigger: TGTCCGTGTTGGTGCTGCCTTTTGTGGTGACGAGCTCCATCCGCAGGGAATGGATCTTTGGTGTAGTGTGGTGCAACTTCTCTGCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367838.5
ENST00000493800.1
ENST00000537209.5
ENST00000682931.1
CDS GCA 90 bp GAGGCCCTCATCTCTGCTCGGCAGCTAAAACATCTCCTTCTTCGATaGTCTGCAACTGCAGCCTCTGGCTCACAAGAGTTCTGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: EALISARQLKHLLLR*SATAASGSQEFCCL
Trigger: GAGGCAGCAGAACTCTTGTGAGCCAGAGGCTGCAGTTGCAGAGCATCGAAGAAGGAGATGTTTTAGCTGCCGAGCAGAGATGAGGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000478868.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS-3UTR CAA 90 bp GCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATGTGCCACAGTGCACCTaGCGTGCCTTGACCCTGGCC +
Preference number: 5 (lower is better)
Translates to: AEAVDCRHYFQSLSWWLHVPQCT*RALTLA
Trigger: GGCCAGGGTCAAGGCACGCAAGGTGCACTGTGGCAC...ATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTGTGCCACAGTGCACCTaGCGTGCCTTGACCCTGGCC +
Preference number: 5 (lower is better)
Translates to: GPKRSSHVVSGNAEAVDCVPQCT*RALTLA
Trigger: GGCCAGGGTCAAGGCACGCAAGGTGCACTGTGGCAC...ACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp TGCTCCTTCCCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCATGCCCAGTAGTTCTTaGCGAACTGTCTTGTTCCAG +
Preference number: 5 (lower is better)
Translates to: CSFPVCGQLYTVTCSQGRMPSSS*RTVLFQ
Trigger: CTGGAACAAGACAGTTCGCAAAGAACTACTGGGCAT...GCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGGGAAGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AGAGCTGGGCCAATAACCCAGGTTGCTGGCTGTGGGTCCAGGGCTGCTTCTATCAGGTCTGTGATCCTGTaGGAAATGCTGAAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: RAGPITQVAGCGSRAASIRSVIL*EMLKSL
Trigger: CAGGCTCTTCAGCATTTCCAACAGGATCACAGACCT...GATAGAAGCAGCCCTGGACCCACAGCCAGCAACCTGGGTTATTGGCCCAGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp TCCCTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCGGCAGCTTCTTTGATTaGTTCCACTTCATCCTCAAA +
Preference number: 5 (lower is better)
Translates to: SLLAPAGGATEDRSEALCGSFFD*FHFILK
Trigger: TTTGAGGATGAAGTGGAACAAATCAAAGAAGCTGCC...GCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTCCCCAAATAAGTTGATTTaGGCTTCGGCCTCAATGGCT +
Preference number: 5 (lower is better)
Translates to: LYTVTCSQGRGTGGDGNSPNKLI*ASASMA
Trigger: AGCCATTGAGGCCGAAGCCAAAATCAACTTATTTGG...GGAGTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp TGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCATCCTCCCCAAATAAGTaGATTTTGGCTTCGGCCTCA +
Preference number: 5 (lower is better)
Translates to: WVLSLRTSPRTEGPTLPASSPNK*ILASAS
Trigger: TGAGGCCGAAGCCAAAATCAACTTATTTGGGGAGGA...TGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp TCCCTATTAGCACCAGCAGGTGGCGCCACTGAGGACCGCTCCGAAGCGCTCTGCTACCTGCCCTTCCTCTaGTCTTTTATAGTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: SLLAPAGGATEDRSEALCYLPFL*SFIVVS
Trigger: AGAAACCACTATAAAAGACAAGAGGAAGGGCAGGTA...GCAGAGCGCTTCGGAGCGGTCCTCAGTGGCGCCACCTGCTGGTGCTAATAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTAGACACAGGACTGAGTaGTTTAAGCTAACGAGTAGC +
Preference number: 5 (lower is better)
Translates to: RVPHCPHQPCRGTRTVACRHRTE*FKLTSS
Trigger: GCTACTCGTTAGCTTAAACAACTCAGTCCTGTGTCT...ACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GAACCCAAGAGCCACAGCCAGGCAGTCACTCTGTCACTACAGGACAGAGCTGTCCCCCTTGGCCAAGACTaGGAGTTTGGCTTTGACTCT +
Preference number: 5 (lower is better)
Translates to: EPKSHSQAVTLSLQDRAVPLGQD*EFGFDS
Trigger: AGAGTCAAAGCCAAACTCCAAGTCTTGGCCAAGGGG...GACAGCTCTGTCCTGTAGTGACAGAGTGACTGCCTGGCTGTGGCTCTTGGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGATTAGCCAGGGATTTTaGTTTTTCGAGGGTTGGTTT +
Preference number: 5 (lower is better)
Translates to: GQLYTVTCSQGRGTGGDGISQGF*FFEGWF
Trigger: AAACCAACCCTCGAAAAACAAAAATCCCTGGCTAAT...CCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS CCA 90 bp CAGAGAAGTTGCACCACACTACACCAAAGATCCATTCCCTGCGGATaGAGCTCGTCACCACAAAAGGCAGCACCAACACGGACAGCAGGA +
Preference number: 5 (lower is better)
Translates to: QRSCTTLHQRSIPCG*SSSPQKAAPTRTAG
Trigger: TCCTGCTGTCCGTGTTGGTGCTGCCTTTTGTGGTGACGAGCTCCATCCGCAGGGAATGGATCTTTGGTGTAGTGTGGTGCAACTTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367838.5
ENST00000493800.1
ENST00000537209.5
ENST00000682931.1
CDS-3UTR CAA 90 bp ATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAAGAGGCAGAGGTGGGCCAGCTGAGGGAGGAGTaGAGGCTCATGGTCAGTGCA +
Preference number: 5 (lower is better)
Translates to: IAQGPNKAEISMKEAEVGQLREE*RLMVSA
Trigger: TGCACTGACCATGAGCCTCAACTCCTCCCTCAGCTG...GCCCACCTCTGCCTCTTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271357.9
ENST00000537209.5
CDS-3UTR CAA 90 bp CGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCAGGAGGGCAGAGAAGTaGCACCACACTACACCAAAG +
Preference number: 5 (lower is better)
Translates to: RINHVEAPGRSRVIRKKCRRAEK*HHTTPK
Trigger: CTTTGGTGTAGTGTGGTGCAACTTCTCTGCCCTCCT...GCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
CDS-3UTR CAA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATATGCACCTTGCGTGCCTaGACCCTGGCCACGCGGAAG +
Preference number: 5 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCICTLRA*TLATRK
Trigger: CTTCCGCGTGGCCAGGGTCAAGGCACGCAAGGTGCA...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATAGTGCCACAGTGCACCTaGCGTGCCTTGACCCTGGCC +
Preference number: 5 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCIVPQCT*RALTLA
Trigger: GGCCAGGGTCAAGGCACGCAAGGTGCACTGTGGCAC...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GGAGGAAATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCGGAAGTCCTCTGTCGTaGCACAAATGGTTCCCGATA +
Preference number: 5 (lower is better)
Translates to: GGNDACGGLLPSPSSLVLGSPLS*HKWFPI
Trigger: TATCGGGAACCATTTGTGCAACGACAGAGGACTTCC...GAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCATTTCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTGGCAGCTTCTTTGATTaGTTCCACTTCATCCTCAAA +
Preference number: 5 (lower is better)
Translates to: RVPHCPHQPCRGTRTVACGSFFD*FHFILK
Trigger: TTTGAGGATGAAGTGGAACAAATCAAAGAAGCTGCC...ACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp TGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATTACCTGCCCTTCCTCTaGTCTTTTATAGTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: CGQLYTVTCSQGRGTGGDYLPFL*SFIVVS
Trigger: AGAAACCACTATAAAAGACAAGAGGAAGGGCAGGTA...ATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGCATCTGGCACAGATTTCCTGGCTGTGCTaGGCACTACAGTCCCATTCA +
Preference number: 5 (lower is better)
Translates to: VILHSTLGRVLLLRHLAQISWLC*ALQSHS
Trigger: TGAATGGGACTGTAGTGCCAAGCACAGCCAGGAAAT...CTGTGCCAGATGCCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGCAAAGCCACAGAACCTaGATCTGCCTGCACTTCACA +
Preference number: 5 (lower is better)
Translates to: ARINHVEAPGRSRVIRKKQSHRT*ICLHFT
Trigger: TGTGAAGTGCAGGCAGATCAAGGTTCTGTGGCTTTG...CTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGTGCCCCTCATGCATCTaGGTGGCTGGCATTCTATCC +
Preference number: 5 (lower is better)
Translates to: KKCCVILHSTLGRVLLLRCPSCI*VAGILS
Trigger: GGATAGAATGCCAGCCACCAAGATGCATGAGGGGCA...CCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACGTCCTAAATGTGGTCTaGTCAAAACCAGAAGACACA +
Preference number: 5 (lower is better)
Translates to: QLYTVTCSQGRGTGGDGNVLNVV*SKPEDT
Trigger: TGTGTCTTCTGGTTTTGACAAGACCACATTTAGGAC...GTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CCCAACCCACAAGGACAGTATGGCTCTGCTCCTTCTTATAGGCATATATGGCTACTAGCCAGGTGGTCCTaGGTCACCAAGGCCGTGGAC +
Preference number: 5 (lower is better)
Translates to: PNPQGQYGSAPSYRHIWLLARWS*VTKAVD
Trigger: GTCCACGGCCTTGGTGACCAAGGACCACCTGGCTAG...TAGCCATATATGCCTATAAGAAGGAGCAGAGCCATACTGTCCTTGTGGGTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp TGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCAAAGAATCAAGGAACATaGGCACTAGATGGCCCTTGT +
Preference number: 5 (lower is better)
Translates to: WVLSLRTSPRTEGPTLPAKNQGT*ALDGPC
Trigger: ACAAGGGCCATCTAGTGCCAATGTTCCTTGATTCTT...TGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGTCATTGGTTGTTCACTaGTTTACAGAAAGACCACAT +
Preference number: 5 (lower is better)
Translates to: GQLYTVTCSQGRGTGGDGSLVVH*FTERPH
Trigger: ATGTGGTCTTTCTGTAAACAAGTGAACAACCAATGA...CCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGTATCTAAGAGGCATATaGTCGGGATGGAAAATATTC +
Preference number: 5 (lower is better)
Translates to: GQLYTVTCSQGRGTGGDGYLRGI*SGWKIF
Trigger: GAATATTTTCCATCCCGACAATATGCCTCTTAGATA...CCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAGAATGATTTTATCTTaGTACAAACAGGCCAGTAGC +
Preference number: 5 (lower is better)
Translates to: GQLYTVTCSQGRGTGGDGRMILS*YKQASS
Trigger: GCTACTGGCCTGTTTGTACAAAGATAAAATCATTCT...CCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS TCA 90 bp AGTGAAGCCAGATGTAGACAAGTGCCATCACAGCCCGGTTCCCTGTaGTCTTCATGGGGTACACCATGGGGTACAGGACAGCATAGTAGC +
Preference number: 5 (lower is better)
Translates to: SEARCRQVPSQPGSL*SSWGTPWGTGQHSS
Trigger: GCTACTATGCTGTCCTGTACCCCATGGTGTACCCCATGAAGATCACAGGGAACCGGGCTGTGATGGCACTTGTCTACATCTGGCTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000493800.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS-3UTR CAA 90 bp AGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTGCACCTTGCGTGCCTaGACCCTGGCCACGCGGAAG +
Preference number: 5 (lower is better)
Translates to: RSSHVVSGNAEAVDCRHYCTLRA*TLATRK
Trigger: CTTCCGCGTGGCCAGGGTCAAGGCACGCAAGGTGCA...ATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGATGCCCAGTAGTTCTTaGCGAACTGTCTTGTTCCAG +
Preference number: 5 (lower is better)
Translates to: ARINHVEAPGRSRVIRKKMPSSS*RTVLFQ
Trigger: CTGGAACAAGACAGTTCGCAAAGAACTACTGGGCAT...CTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGAACATTCTCCAACCCTaGCGTTTCAAAGCCAAGCTG +
Preference number: 5 (lower is better)
Translates to: ARINHVEAPGRSRVIRKKNILQP*RFKAKL
Trigger: CAGCTTGGCTTTGAAACGCAAGGGTTGGAGAATGTT...CTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCAGACACAGGACTGAGTaGTTTAAGCTAACGAGTAGC +
Preference number: 5 (lower is better)
Translates to: GPVLELRVPHCPHQPCRGRHRTE*FKLTSS
Trigger: GCTACTCGTTAGCTTAAACAACTCAGTCCTGTGTCT...GCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CCTGTGTGTGGCCAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCTCATTGGTTGTTCACTaGTTTACAGAAAGACCACAT +
Preference number: 5 (lower is better)
Translates to: PVCGQLYTVTCSQGRGTGSLVVH*FTERPH
Trigger: ATGTGGTCTTTCTGTAAACAAGTGAACAACCAATGA...GCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTGGCCACACACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp ATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCTGTGGGGTTCTGCATATATaGTGGGTAGCATCCCTGCCC +
Preference number: 5 (lower is better)
Translates to: INHVEAPGRSRVIRKKCCGVLHI*WVASLP
Trigger: GGGCAGGGATGCTACCCACAATATATGCAGAACCCC...ACAGCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CGTTTCAAAGCCAAGCTGCTGCACTCAAGAATGCCTACACCTAACCAGCAACCCGCTCTCAGTGTGGTCTaGTCTGCCAGGCCTGTGATT +
Preference number: 5 (lower is better)
Translates to: RFKAKLLHSRMPTPNQQPALSVV*SARPVI
Trigger: AATCACAGGCCTGGCAGACAAGACCACACTGAGAGC...GGGTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS GCA 90 bp GTTCCCGATAATACCGGTCCCCAAAGCACATGCCCAGTAGTTCTTTaGGAACTGTCTTGTTCCAGAGTCCATAGATCAGGGGGTGGCAGA +
Preference number: 5 (lower is better)
Translates to: VPDNTGPQSTCPVVL*ELSCSRVHRSGGGR
Trigger: TCTGCCACCCCCTGATCTATGGACTCTGGAACAAGACAGTTCGCAAAGAACTACTGGGCATGTGCTTTGGGGACCGGTATTATCGGGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000493800.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS CCA 90 bp TTGTTCCACTTCATCCTCAAATGTCACCGAGCTCCTTCTCTTGGGTaGGCAAGTGCAGTGAGAGGGAGGGTTGTCATCAGACGTGTAGTC +
Preference number: 5 (lower is better)
Translates to: LFHFILKCHRAPSLG*ASAVRGRVVIRRVV
Trigger: GACTACACGTCTGATGACAACCCTCCCTCTCACTGCACTTGCCCACCCAAGAGAAGGAGCTCGGTGACATTTGAGGATGAAGTGGAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000478868.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS-3UTR CAA 90 bp GGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTCAGCTGAGGGAGGAGTaGAGGCTCATGGTCAGTGCA +
Preference number: 5 (lower is better)
Translates to: GPKRSSHVVSGNAEAVDCQLREE*RLMVSA
Trigger: TGCACTGACCATGAGCCTCAACTCCTCCCTCAGCTG...ACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367838.5
ENST00000537209.5
CDS-3UTR CAA 90 bp ATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAAGAGGCAGAGGTGGGCAGGAGGGCAGAGAAGTaGCACCACACTACACCAAAG +
Preference number: 5 (lower is better)
Translates to: IAQGPNKAEISMKEAEVGRRAEK*HHTTPK
Trigger: CTTTGGTGTAGTGTGGTGCAACTTCTCTGCCCTCCT...GCCCACCTCTGCCTCTTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271357.9
ENST00000537209.5
CDS-3UTR CAA 90 bp GACTTGACTTTGCTAGTTATTAGAATCGGTATCCACAGGTCCTGCTCCCTAAATTGCACCTTGCGTGCCTaGACCCTGGCCACGCGGAAG +
Preference number: 5 (lower is better)
Translates to: DLTLLVIRIGIHRSCSLNCTLRA*TLATRK
Trigger: CTTCCGCGTGGCCAGGGTCAAGGCACGCAAGGTGCA...ATTTAGGGAGCAGGACCTGTGGATACCGATTCTAATAACTAGCAAAGTCAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AGATTGTGCTCTAATGGACAGGGCAGACAAAGCCACAGAACCTTGATCTGCCTGTGCCCCTCATGCATCTaGGTGGCTGGCATTCTATCC +
Preference number: 5 (lower is better)
Translates to: RLCSNGQGRQSHRTLICLCPSCI*VAGILS
Trigger: GGATAGAATGCCAGCCACCAAGATGCATGAGGGGCA...CAGGCAGATCAAGGTTCTGTGGCTTTGTCTGCCCTGTCCATTAGAGCACAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CGCGTGTCATTAGGAAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGCACACTTTAGTGGTATaGCCTACAGAGCCTAGCCTG +
Preference number: 5 (lower is better)
Translates to: RVSLGRSAVSSFTVHWGGHTLVV*PTEPSL
Trigger: CAGGCTAGGCTCTGTAGGCAATACCACTAAAGTGTG...CCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTTCCTAATGACACGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp TGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCAAACCACGACTTGACTTaGCTAGTTATTAGAATCGGT +
Preference number: 5 (lower is better)
Translates to: WVLSLRTSPRTEGPTLPANHDLT*LVIRIG
Trigger: ACCGATTCTAATAACTAGCAAAGTCAAGTCGTGGTT...TGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CCTGGGTGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGTCATTGGTTGTTCACTaGTTTACAGAAAGACCACAT +
Preference number: 5 (lower is better)
Translates to: PGCFLCGPVLELRVPHCPSLVVH*FTERPH
Trigger: ATGTGGTCTTTCTGTAAACAAGTGAACAACCAATGA...CGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCACCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CCTGGTATCTGTGGCATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAAGCTGCACCCCAGGCATaGTGCTGCATGCTTTCCAAG +
Preference number: 5 (lower is better)
Translates to: PGICGIAQGPNKAEISMKAAPQA*CCMLSK
Trigger: CTTGGAAAGCATGCAGCACAATGCCTGGGGTGCAGC...TTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTATGCCACAGATACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GGAGGAAATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCTATTTGTGCTATGATTaGGAACGTTACACCAGGCCC +
Preference number: 5 (lower is better)
Translates to: GGNDACGGLLPSPSSLVLYLCYD*ERYTRP
Trigger: GGGCCTGGTGTAACGTTCCAAATCATAGCACAAATA...GAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCATTTCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AGGGTCCCACACTGCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTTTTGTTTTTCGAGGGTaGGTTTTTAACCACTTCTTC +
Preference number: 5 (lower is better)
Translates to: RVPHCPHQPCRGTRTVACFVFRG*VFNHFF
Trigger: GAAGAAGTGGTTAAAAACCAACCCTCGAAAAACAAA...ACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGCAGTGTGGGACCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CAGCTGTACACAGTGACATGCTCCCAAGGCCGCGGCACAGGCGGTGATGGGAACTTTGTTTTTCGAGGGTaGGTTTTTAACCACTTCTTC +
Preference number: 5 (lower is better)
Translates to: QLYTVTCSQGRGTGGDGNFVFRG*VFNHFF
Trigger: GAAGAAGTGGTTAAAAACCAACCCTCGAAAAACAAA...GTTCCCATCACCGCCTGTGCCGCGGCCTTGGGAGCATGTCACTGTGTACAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GGAGGAAATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCTCTATGTTTCCAGGCTaGGTGACCATATTGAGCACA +
Preference number: 5 (lower is better)
Translates to: GGNDACGGLLPSPSSLVLSMFPG*VTILST
Trigger: TGTGCTCAATATGGTCACCAAGCCTGGAAACATAGA...GAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCATTTCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367838.5
CDS-3UTR CAA 90 bp ACCAAGGGCATTTCTCAGGGAGAATGTCCTTTCTGGACTGTAAGGAAGGTCAAGACGGACAGCAGGAAGTaGGACAGAGTCAGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: TKGISQGECPFWTVRKVKTDSRK*DRVRLK
Trigger: CTTCAGCCTGACTCTGTCCAACTTCCTGCTGTCCGT...CTTGACCTTCCTTACAGTCCAGAAAGGACATTCTCCCTGAGAAATGCCCTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271357.9
ENST00000537209.5
CDS-3UTR CAA 90 bp CGTTTCAAAGCCAAGCTGCTGCACTCAAGAATGCCTACACCTAACCAGCAACCCAGGTCTGTGATCCTGTaGGAAATGCTGAAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: RFKAKLLHSRMPTPNQQPRSVIL*EMLKSL
Trigger: CAGGCTCTTCAGCATTTCCAACAGGATCACAGACCT...GGGTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp TGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCATCAAGGCAGCTTCTTTGATTaGTTCCACTTCATCCTCAAA +
Preference number: 5 (lower is better)
Translates to: CFLCGPVLELRVPHCPHQGSFFD*FHFILK
Trigger: TTTGAGGATGAAGTGGAACAAATCAAAGAAGCTGCC...TTGATGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AGTCACCCTGTGACGGAGGACTCCCTCAATCCTGTGTGTCTCCACATTGAAACAGGCATTCTATCCAGATaGTGCTCTAATGGACAGGGC +
Preference number: 5 (lower is better)
Translates to: SHPVTEDSLNPVCLHIETGILSR*CSNGQG
Trigger: GCCCTGTCCATTAGAGCACAATCTGGATAGAATGCC...TGTTTCAATGTGGAGACACACAGGATTGAGGGAGTCCTCCGTCACAGGGTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp TGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCATCAATGTTGTGAATGTATCTaGTGGTCCATCCAGAGACAT +
Preference number: 5 (lower is better)
Translates to: CFLCGPVLELRVPHCPHQCCECI*WSIQRH
Trigger: ATGTCTCTGGATGGACCACAAGATACATTCACAACA...TTGATGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GCCCGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGTTGTGAATGTATCTaGTGGTCCATCCAGAGACAT +
Preference number: 5 (lower is better)
Translates to: ARINHVEAPGRSRVIRKKCCECI*WSIQRH
Trigger: ATGTCTCTGGATGGACCACAAGATACATTCACAACA...CTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GAACCCAAGAGCCACAGCCAGGCAGTCACTCTGTCACTACAGGACAGAGCTGTCCTCACTATATCACACTaGCACTGGGGTAAAATGAGA +
Preference number: 5 (lower is better)
Translates to: EPKSHSQAVTLSLQDRAVLTISH*HWGKMR
Trigger: TCTCATTTTACCCCAGTGCAAGTGTGATATAGTGAG...GACAGCTCTGTCCTGTAGTGACAGAGTGACTGCCTGGCTGTGGCTCTTGGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GGAGGAAATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCCTCACTATATCACACTaGCACTGGGGTAAAATGAGA +
Preference number: 5 (lower is better)
Translates to: GGNDACGGLLPSPSSLVLLTISH*HWGKMR
Trigger: TCTCATTTTACCCCAGTGCAAGTGTGATATAGTGAG...GAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCATTTCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGTTCTCCTCCTGAGGCCAGGCCCTGGGGATTaGATCATCTTTGATAGTCAT +
Preference number: 5 (lower is better)
Translates to: KKCCVILHSTLGRVLLLRPGPGD*IIFDSH
Trigger: ATGACTATCAAAGATGATCAAATCCCCAGGGCCTGG...CCTCAGGAGGAGAACCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GGAGGAAATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCTATACCTCATCTTCCTaGACCTATAAGACTAGCTCC +
Preference number: 5 (lower is better)
Translates to: GGNDACGGLLPSPSSLVLYTSSS*TYKTSS
Trigger: GGAGCTAGTCTTATAGGTCAAGGAAGATGAGGTATA...GAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCATTTCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GATGGGGTCATGCATGTAAGCAGGCTAGCCAGGTGGTCCTTGGTCACCAAGGCCATTAGCCAGGGATTTTaGTTTTTCGAGGGTTGGTTT +
Preference number: 5 (lower is better)
Translates to: DGVMHVSRLARWSLVTKAISQGF*FFEGWF
Trigger: AAACCAACCCTCGAAAAACAAAAATCCCTGGCTAAT...GGCCTTGGTGACCAAGGACCACCTGGCTAGCCTGCTTACATGCATGACCCCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCTCCTTCTCAGAATGTTaGTTTTCCCTTCCTCACTCC +
Preference number: 5 (lower is better)
Translates to: RINHVEAPGRSRVIRKKCSFSEC*FSLPHS
Trigger: GGAGTGAGGAAGGGAAAACAAACATTCTGAGAAGGA...GCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537209.5
CDS-3UTR CAA 90 bp GCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATAGGAGGGCAGAGAAGTaGCACCACACTACACCAAAG +
Preference number: 5 (lower is better)
Translates to: AEAVDCRHYFQSLSWWLHRRAEK*HHTTPK
Trigger: CTTTGGTGTAGTGTGGTGCAACTTCTCTGCCCTCCT...ATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367838.5
ENST00000537209.5
CDS-3UTR CAA 90 bp GCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACGTCTTAAGGTCTGTGATCCTGTaGGAAATGCTGAAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: AVLGTTVPFSPVKQWYVLRSVIL*EMLKSL
Trigger: CAGGCTCTTCAGCATTTCCAACAGGATCACAGACCT...TAAGACGTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp ATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAAGAGGCAGAGGTGGGCTCCTCCCCAAATAAGTaGATTTTGGCTTCGGCCTCA +
Preference number: 5 (lower is better)
Translates to: IAQGPNKAEISMKEAEVGSSPNK*ILASAS
Trigger: TGAGGCCGAAGCCAAAATCAACTTATTTGGGGAGGA...GCCCACCTCTGCCTCTTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCTACCTGCCCTTCCTCTaGTCTTTTATAGTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: RINHVEAPGRSRVIRKKCYLPFL*SFIVVS
Trigger: AGAAACCACTATAAAAGACAAGAGGAAGGGCAGGTA...GCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACCAAAGCCACAGAACCTaGATCTGCCTGCACTTCACA +
Preference number: 5 (lower is better)
Translates to: LGPKRSSHVVSGNAEAVDQSHRT*ICLHFT
Trigger: TGTGAAGTGCAGGCAGATCAAGGTTCTGTGGCTTTG...GTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp ATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCTGTACCAGCAAGATCTCCTaGGAATCTACCTTCTGCCAA +
Preference number: 5 (lower is better)
Translates to: INHVEAPGRSRVIRKKCCTSKIS*ESTFCQ
Trigger: TTGGCAGAAGGTAGATTCCAAGGAGATCTTGCTGGT...ACAGCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GGCCGTGGACTACACGATAAGGGCAAAGGAATTCAAAACAAGAGTGCCCAGCCAAACATTCTCCAACCCTaGCGTTTCAAAGCCAAGCTG +
Preference number: 5 (lower is better)
Translates to: GRGLHDKGKGIQNKSAQPNILQP*RFKAKL
Trigger: CAGCTTGGCTTTGAAACGCAAGGGTTGGAGAATGTT...TGGCTGGGCACTCTTGTTTTGAATTCCTTTGCCCTTATCGTGTAGTCCACGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTCTCTCAGGTTCATCCTaGGCTCTGCACAGCCACACC +
Preference number: 5 (lower is better)
Translates to: EAHMWSLEMLKLWTVDIILSGSS*ALHSHT
Trigger: GGTGTGGCTGTGCAGAGCCAAGGATGAACCTGAGAG...AATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp ATGATGCATGTGGGGGTCTCCTTCCAAGCCCTTCGTCTCTGGTCCTCCCATGCCAATGAGATAAAGCATTaGGAAGTACCTAACACAGCA +
Preference number: 5 (lower is better)
Translates to: MMHVGVSFQALRLWSSHANEIKH*EVPNTA
Trigger: TGCTGTGTTAGGTACTTCCAAATGCTTTATCTCATT...GGCATGGGAGGACCAGAGACGAAGGGCTTGGAAGGAGACCCCCACATGCATCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCTCTGAAAGTCCTTCCTaGCTGTGCAACAAATATGAC +
Preference number: 5 (lower is better)
Translates to: RINHVEAPGRSRVIRKKCSESPS*LCNKYD
Trigger: GTCATATTTGTTGCACAGCAAGGAAGGACTTTCAGA...GCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GATGGGGTCATGCATGTAAGCAGGCTAGCCAGGTGGTCCTTGGTCACCAAGGCCAGAATGATTTTATCTTaGTACAAACAGGCCAGTAGC +
Preference number: 5 (lower is better)
Translates to: DGVMHVSRLARWSLVTKARMILS*YKQASS
Trigger: GCTACTGGCCTGTTTGTACAAAGATAAAATCATTCT...GGCCTTGGTGACCAAGGACCACCTGGCTAGCCTGCTTACATGCATGACCCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATAGGGGTTCTGCATATATaGTGGGTAGCATCCCTGCCC +
Preference number: 5 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCIGVLHI*WVASLP
Trigger: GGGCAGGGATGCTACCCACAATATATGCAGAACCCC...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATTCATCCCATATGCCTTaGTCCAAAGGTTGCACGGGG +
Preference number: 5 (lower is better)
Translates to: AEAVDCRHYFQSLSWWLHSSHMP*SKGCTG
Trigger: CCCCGTGCAACCTTTGGACAAAGGCATATGGGATGA...ATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367836.5
CDS GCA 90 bp GTCGTTGCACAAATGGTTCCCGATAATACCGGTCCCCAAAGCACATaGCCAGTAGTTCTTTGCGAACTGTCTTGTTCCAGAGTCCATAGA +
Preference number: 5 (lower is better)
Translates to: VVAQMVPDNTGPQST*PVVLCELSCSRVHR
Trigger: TCTATGGACTCTGGAACAAGACAGTTCGCAAAGAACTACTGGGCATGTGCTTTGGGGACCGGTATTATCGGGAACCATTTGTGCAACGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000493800.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS-3UTR CAA 90 bp AAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTGGTTTCTCCCTTTTGCAGCTGAGGGAGGAGTaGAGGCTCATGGTCAGTGCA +
Preference number: 5 (lower is better)
Translates to: KHLVPALPLVFYSGFSLLQLREE*RLMVSA
Trigger: TGCACTGACCATGAGCCTCAACTCCTCCCTCAGCTG...CAAAAGGGAGAAACCACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
CDS-3UTR CAA 90 bp GCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACGTCTTAATGCCCAGTAGTTCTTaGCGAACTGTCTTGTTCCAG +
Preference number: 5 (lower is better)
Translates to: AVLGTTVPFSPVKQWYVLMPSSS*RTVLFQ
Trigger: CTGGAACAAGACAGTTCGCAAAGAACTACTGGGCAT...TAAGACGTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CATCACTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGGGAAGTCCTCTGTCGTaGCACAAATGGTTCCCGATA +
Preference number: 5 (lower is better)
Translates to: HHWDLKEAHMWSLEMLKLGSPLS*HKWFPI
Trigger: TATCGGGAACCATTTGTGCAACGACAGAGGACTTCC...CAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CCCAACCCACAAGGACAGTATGGCTCTGCTCCTTCTTATAGGCATATATGGCTAGGAAGTCCTCTGTCGTaGCACAAATGGTTCCCGATA +
Preference number: 5 (lower is better)
Translates to: PNPQGQYGSAPSYRHIWLGSPLS*HKWFPI
Trigger: TATCGGGAACCATTTGTGCAACGACAGAGGACTTCC...TAGCCATATATGCCTATAAGAAGGAGCAGAGCCATACTGTCCTTGTGGGTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATAGGTCTGTGATCCTGTaGGAAATGCTGAAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: AEAVDCRHYFQSLSWWLHRSVIL*EMLKSL
Trigger: CAGGCTCTTCAGCATTTCCAACAGGATCACAGACCT...ATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTCCTCCCCAAATAAGTaGATTTTGGCTTCGGCCTCA +
Preference number: 5 (lower is better)
Translates to: LGPKRSSHVVSGNAEAVDSSPNK*ILASAS
Trigger: TGAGGCCGAAGCCAAAATCAACTTATTTGGGGAGGA...GTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp TGCTTTCTCTGCGGACCAGTCCTAGAACTGAGGGTCCCACACTGCCCGCATCAATATCTAAGAGGCATATaGTCGGGATGGAAAATATTC +
Preference number: 5 (lower is better)
Translates to: CFLCGPVLELRVPHCPHQYLRGI*SGWKIF
Trigger: GAATATTTTCCATCCCGACAATATGCCTCTTAGATA...TTGATGCGGGCAGTGTGGGACCCTCAGTTCTAGGACTGGTCCGCAGAGAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GAACCCAAGAGCCACAGCCAGGCAGTCACTCTGTCACTACAGGACAGAGCTGTCATAGAAAATCTCATTTaGGCTCCCTTAGACTTCTCA +
Preference number: 5 (lower is better)
Translates to: EPKSHSQAVTLSLQDRAVIENLI*APLDFS
Trigger: TGAGAAGTCTAAGGGAGCCAAAATGAGATTTTCTAT...GACAGCTCTGTCCTGTAGTGACAGAGTGACTGCCTGGCTGTGGCTCTTGGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATAGCCACACACATCCATTaGAACTCGTCAAACTCCACG +
Preference number: 5 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCIATHIH*NSSNST
Trigger: CGTGGAGTTTGACGAGTTCAAATGGATGTGTGTGGC...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATAGGAAGTCCTCTGTCGTaGCACAAATGGTTCCCGATA +
Preference number: 5 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCIGSPLS*HKWFPI
Trigger: TATCGGGAACCATTTGTGCAACGACAGAGGACTTCC...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CGTTTCAAAGCCAAGCTGCTGCACTCAAGAATGCCTACACCTAACCAGCAACCCTTCTTGGCAGCTTCTTaGATTTGTTCCACTTCATCC +
Preference number: 5 (lower is better)
Translates to: RFKAKLLHSRMPTPNQQPFLAAS*ICSTSS
Trigger: GGATGAAGTGGAACAAATCAAAGAAGCTGCCAAGAA...GGGTTGCTGGTTAGGTGTAGGCATTCTTGAGTGCAGCAGCTTGGCTTTGAAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp ATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAAGAGGCAGAGGTGGGCTTCTTGGCAGCTTCTTaGATTTGTTCCACTTCATCC +
Preference number: 5 (lower is better)
Translates to: IAQGPNKAEISMKEAEVGFLAAS*ICSTSS
Trigger: GGATGAAGTGGAACAAATCAAAGAAGCTGCCAAGAA...GCCCACCTCTGCCTCTTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp ACCAAGGGCATTTCTCAGGGAGAATGTCCTTTCTGGACTGTAAGGAAGGTCAAGTCCTCCCCAAATAAGTaGATTTTGGCTTCGGCCTCA +
Preference number: 5 (lower is better)
Translates to: TKGISQGECPFWTVRKVKSSPNK*ILASAS
Trigger: TGAGGCCGAAGCCAAAATCAACTTATTTGGGGAGGA...CTTGACCTTCCTTACAGTCCAGAAAGGACATTCTCCCTGAGAAATGCCCTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp TTCCTGGCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACTACCTGCCCTTCCTCTaGTCTTTTATAGTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: FLAVLGTTVPFSPVKQWYYLPFL*SFIVVS
Trigger: AGAAACCACTATAAAAGACAAGAGGAAGGGCAGGTA...GTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGCCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AAGGGTAATTCACTTTCTAGAACAGCTGCCTCTCAGCAACCAGCAAGATCTCCTGGCATTCTATCCAGATaGTGCTCTAATGGACAGGGC +
Preference number: 5 (lower is better)
Translates to: KGNSLSRTAASQQPARSPGILSR*CSNGQG
Trigger: GCCCTGTCCATTAGAGCACAATCTGGATAGAATGCC...AGGAGATCTTGCTGGTTGCTGAGAGGCAGCTGTTCTAGAAAGTGAATTACCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp ACCAAGGGCATTTCTCAGGGAGAATGTCCTTTCTGGACTGTAAGGAAGGTCAAGACCAGCAAGATCTCCTaGGAATCTACCTTCTGCCAA +
Preference number: 5 (lower is better)
Translates to: TKGISQGECPFWTVRKVKTSKIS*ESTFCQ
Trigger: TTGGCAGAAGGTAGATTCCAAGGAGATCTTGCTGGT...CTTGACCTTCCTTACAGTCCAGAAAGGACATTCTCCCTGAGAAATGCCCTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp TTCCTGGCTGTGCTTGGCACTACAGTCCCATTCAGTCCGGTAAAACAGTGGTACGTCCTAAATGTGGTCTaGTCAAAACCAGAAGACACA +
Preference number: 5 (lower is better)
Translates to: FLAVLGTTVPFSPVKQWYVLNVV*SKPEDT
Trigger: TGTGTCTTCTGGTTTTGACAAGACCACATTTAGGAC...GTACCACTGTTTTACCGGACTGAATGGGACTGTAGTGCCAAGCACAGCCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CTAAACTTCCCTTCACAGATGAGGAAACTCATAAGTAGTGACTTGTTTGAAAACCTAGCCAGGTGGTCCTaGGTCACCAAGGCCGTGGAC +
Preference number: 5 (lower is better)
Translates to: LNFPSQMRKLISSDLFENLARWS*VTKAVD
Trigger: GTCCACGGCCTTGGTGACCAAGGACCACCTGGCTAG...GTTTTCAAACAAGTCACTACTTATGAGTTTCCTCATCTGTGAAGGGAAGTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTGGCACTAGATGGCCCTaGTCTTACACTCCTCAACTC +
Preference number: 5 (lower is better)
Translates to: EAHMWSLEMLKLWTVDIIGTRWP*SYTPQL
Trigger: GAGTTGAGGAGTGTAAGACAAGGGCCATCTAGTGCC...AATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CGCATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCATAGAAAATCTCATTTaGGCTCCCTTAGACTTCTCA +
Preference number: 5 (lower is better)
Translates to: RINHVEAPGRSRVIRKKCIENLI*APLDFS
Trigger: TGAGAAGTCTAAGGGAGCCAAAATGAGATTTTCTAT...GCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGATGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTATAAGACTAGCTCCTaGCTTTTCTCATCCCCTTGG +
Preference number: 5 (lower is better)
Translates to: LGPKRSSHVVSGNAEAVDYKTSS*LFSSPW
Trigger: CCAAGGGGATGAGAAAAGCAAGGAGCTAGTCTTATA...GTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS GCA 90 bp TCCTCAAGCAGCATCATATCTGTCCCTAAAACAACGGGCAGATTGTaGATATGTAACTACAATCTAAAGTCCTCCTGGCCTCTTCTCCCC +
Preference number: 5 (lower is better)
Translates to: SSSSIISVPKTTGRL*ICNYNLKSSWPLLP
Trigger: GGGGAGAAGAGGCCAGGAGGACTTTAGATTGTAGTTACATATGCACAATCTGCCCGTTGTTTTAGGGACAGATATGATGCTGCTTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478868.1
CDS-3UTR CAA 90 bp GAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTGCCACACACATCCATTaGAACTCGTCAAACTCCACG +
Preference number: 5 (lower is better)
Translates to: EAHMWSLEMLKLWTVDIIATHIH*NSSNST
Trigger: CGTGGAGTTTGACGAGTTCAAATGGATGTGTGTGGC...AATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTGGAAGTCCTCTGTCGTaGCACAAATGGTTCCCGATA +
Preference number: 5 (lower is better)
Translates to: EAHMWSLEMLKLWTVDIIGSPLS*HKWFPI
Trigger: TATCGGGAACCATTTGTGCAACGACAGAGGACTTCC...AATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACGGCAGCTTCTTTGATTaGTTCCACTTCATCCTCAAA +
Preference number: 5 (lower is better)
Translates to: LGPKRSSHVVSGNAEAVDGSFFD*FHFILK
Trigger: TTTGAGGATGAAGTGGAACAAATCAAAGAAGCTGCC...GTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTTCTTGGCAGCTTCTTaGATTTGTTCCACTTCATCC +
Preference number: 5 (lower is better)
Translates to: LGPKRSSHVVSGNAEAVDFLAAS*ICSTSS
Trigger: GGATGAAGTGGAACAAATCAAAGAAGCTGCCAAGAA...GTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AGATTGTGCTCTAATGGACAGGGCAGACAAAGCCACAGAACCTTGATCTGCCTGTACCTGCCCTTCCTCTaGTCTTTTATAGTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: RLCSNGQGRQSHRTLICLYLPFL*SFIVVS
Trigger: AGAAACCACTATAAAAGACAAGAGGAAGGGCAGGTA...CAGGCAGATCAAGGTTCTGTGGCTTTGTCTGCCCTGTCCATTAGAGCACAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATATTTCCTGGCTGTGCTaGGCACTACAGTCCCATTCA +
Preference number: 5 (lower is better)
Translates to: RSSHVVSGNAEAVDCRHYISWLC*ALQSHS
Trigger: TGAATGGGACTGTAGTGCCAAGCACAGCCAGGAAAT...ATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AAGGGTAATTCACTTTCTAGAACAGCTGCCTCTCAGCAACCAGCAAGATCTCCTACCAGCAAGATCTCCTaGGAATCTACCTTCTGCCAA +
Preference number: 5 (lower is better)
Translates to: KGNSLSRTAASQQPARSPTSKIS*ESTFCQ
Trigger: TTGGCAGAAGGTAGATTCCAAGGAGATCTTGCTGGT...AGGAGATCTTGCTGGTTGCTGAGAGGCAGCTGTTCTAGAAAGTGAATTACCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp ATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAAGAGGCAGAGGTGGGCAACCACGACTTGACTTaGCTAGTTATTAGAATCGGT +
Preference number: 5 (lower is better)
Translates to: IAQGPNKAEISMKEAEVGNHDLT*LVIRIG
Trigger: ACCGATTCTAATAACTAGCAAAGTCAAGTCGTGGTT...GCCCACCTCTGCCTCTTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp ATCAACCATGTAGAGGCACCAGGACGGTCGCGTGTCATTAGGAAGAAGTGCTGTAACCACGACTTGACTTaGCTAGTTATTAGAATCGGT +
Preference number: 5 (lower is better)
Translates to: INHVEAPGRSRVIRKKCCNHDLT*LVIRIG
Trigger: ACCGATTCTAATAACTAGCAAAGTCAAGTCGTGGTT...ACAGCACTTCTTCCTAATGACACGCGACCGTCCTGGTGCCTCTACATGGTTGAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp ACCAAGGGCATTTCTCAGGGAGAATGTCCTTTCTGGACTGTAAGGAAGGTCAAGAGACACAGGACTGAGTaGTTTAAGCTAACGAGTAGC +
Preference number: 5 (lower is better)
Translates to: TKGISQGECPFWTVRKVKRHRTE*FKLTSS
Trigger: GCTACTCGTTAGCTTAAACAACTCAGTCCTGTGTCT...CTTGACCTTCCTTACAGTCCAGAAAGGACATTCTCCCTGAGAAATGCCCTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AGATTGTGCTCTAATGGACAGGGCAGACAAAGCCACAGAACCTTGATCTGCCTGGTCCTAAATGTGGTCTaGTCAAAACCAGAAGACACA +
Preference number: 5 (lower is better)
Translates to: RLCSNGQGRQSHRTLICLVLNVV*SKPEDT
Trigger: TGTGTCTTCTGGTTTTGACAAGACCACATTTAGGAC...CAGGCAGATCAAGGTTCTGTGGCTTTGTCTGCCCTGTCCATTAGAGCACAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CGCGTGTCATTAGGAAGAAGTGCTGTGTCATCCTTCACAGTACACTGGGGAGGGTATCTAAGAGGCATATaGTCGGGATGGAAAATATTC +
Preference number: 5 (lower is better)
Translates to: RVSLGRSAVSSFTVHWGGYLRGI*SGWKIF
Trigger: GAATATTTTCCATCCCGACAATATGCCTCTTAGATA...CCCTCCCCAGTGTACTGTGAAGGATGACACAGCACTTCTTCCTAATGACACGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACCTCACTATATCACACTaGCACTGGGGTAAAATGAGA +
Preference number: 5 (lower is better)
Translates to: LGPKRSSHVVSGNAEAVDLTISH*HWGKMR
Trigger: TCTCATTTTACCCCAGTGCAAGTGTGATATAGTGAG...GTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AGTCACCCTGTGACGGAGGACTCCCTCAATCCTGTGTGTCTCCACATTGAAACACTGTGTGTCTCCACATaGAAACAGATGACTAAACTT +
Preference number: 5 (lower is better)
Translates to: SHPVTEDSLNPVCLHIETLCVST*KQMTKL
Trigger: AAGTTTAGTCATCTGTTTCAATGTGGAGACACACAG...TGTTTCAATGTGGAGACACACAGGATTGAGGGAGTCCTCCGTCACAGGGTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GGCCGTGGACTACACGATAAGGGCAAAGGAATTCAAAACAAGAGTGCCCAGCCAAAGGTCAAGCTGTATTaGTGCTATGATTTGGAACGT +
Preference number: 5 (lower is better)
Translates to: GRGLHDKGKGIQNKSAQPKVKLY*CYDLER
Trigger: ACGTTCCAAATCATAGCACAAATACAGCTTGACCTT...TGGCTGGGCACTCTTGTTTTGAATTCCTTTGCCCTTATCGTGTAGTCCACGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTTATAAGACTAGCTCCTaGCTTTTCTCATCCCCTTGG +
Preference number: 5 (lower is better)
Translates to: GPKRSSHVVSGNAEAVDCYKTSS*LFSSPW
Trigger: CCAAGGGGATGAGAAAAGCAAGGAGCTAGTCTTATA...ACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AGTCACCCTGTGACGGAGGACTCCCTCAATCCTGTGTGTCTCCACATTGAAACAATTAGCCAGGGATTTTaGTTTTTCGAGGGTTGGTTT +
Preference number: 5 (lower is better)
Translates to: SHPVTEDSLNPVCLHIETISQGF*FFEGWF
Trigger: AAACCAACCCTCGAAAAACAAAAATCCCTGGCTAAT...TGTTTCAATGTGGAGACACACAGGATTGAGGGAGTCCTCCGTCACAGGGTGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGATCCTGGTATCGCCTTaGCTGCTCACCTTTCATTCA +
Preference number: 5 (lower is better)
Translates to: NAEAVDCRHYFQSLSWWLILVSP*LLTFHS
Trigger: TGAATGAAAGGTGAGCAGCAAAGGCGATACCAGGAT...CAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367835.1
ENST00000537209.5
CDS-3UTR CAA 90 bp AGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATGCTGGACGACTCCTCTaGCTGACATTTAGGTCAGTT +
Preference number: 5 (lower is better)
Translates to: RSSHVVSGNAEAVDCRHYAGRLL*LTFRSV
Trigger: AACTGACCTAAATGTCAGCAAGAGGAGTCGTCCAGC...ATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537209.5
CDS-3UTR CAA 90 bp TCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGGCCACACACATCCATTaGAACTCGTCAAACTCCACG +
Preference number: 5 (lower is better)
Translates to: SHVVSGNAEAVDCRHYFQATHIH*NSSNST
Trigger: CGTGGAGTTTGACGAGTTCAAATGGATGTGTGTGGC...CTGAAAATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTATGCCCAGTAGTTCTTaGCGAACTGTCTTGTTCCAG +
Preference number: 5 (lower is better)
Translates to: EAHMWSLEMLKLWTVDIIMPSSS*RTVLFQ
Trigger: CTGGAACAAGACAGTTCGCAAAGAACTACTGGGCAT...AATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CATCACTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGGGCAGCTTCTTTGATTaGTTCCACTTCATCCTCAAA +
Preference number: 5 (lower is better)
Translates to: HHWDLKEAHMWSLEMLKLGSFFD*FHFILK
Trigger: TTTGAGGATGAAGTGGAACAAATCAAAGAAGCTGCC...CAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAGTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCCAAATAAGTTGATTTaGGCTTCGGCCTCAATGGCT +
Preference number: 5 (lower is better)
Translates to: NAEAVDCRHYFQSLSWWLPNKLI*ASASMA
Trigger: AGCCATTGAGGCCGAAGCCAAAATCAACTTATTTGG...CAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTCCTCCCCAAATAAGTaGATTTTGGCTTCGGCCTCA +
Preference number: 5 (lower is better)
Translates to: RSSHVVSGNAEAVDCRHYSSPNK*ILASAS
Trigger: TGAGGCCGAAGCCAAAATCAACTTATTTGGGGAGGA...ATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AGTCACCCTGTGACGGAGGACTCCCTCAATCCTGTGTGTCTCCACATTGAAACAAATGAGATAAAGCATTaGGAAGTACCTAACACAGCA +
Preference number: 5 (lower is better)
Translates to: SHPVTEDSLNPVCLHIETNEIKH*EVPNTA
Trigger: TGCTGTGTTAGGTACTTCCAAATGCTTTATCTCATT...TGTTTCAATGTGGAGACACACAGGATTGAGGGAGTCCTCCGTCACAGGGTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp ATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAAGAGGCAGAGGTGGGCAATGAGATAAAGCATTaGGAAGTACCTAACACAGCA +
Preference number: 5 (lower is better)
Translates to: IAQGPNKAEISMKEAEVGNEIKH*EVPNTA
Trigger: TGCTGTGTTAGGTACTTCCAAATGCTTTATCTCATT...GCCCACCTCTGCCTCTTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CTAAACTTCCCTTCACAGATGAGGAAACTCATAAGTAGTGACTTGTTTGAAAACGCTGCACCCCAGGCATaGTGCTGCATGCTTTCCAAG +
Preference number: 5 (lower is better)
Translates to: LNFPSQMRKLISSDLFENAAPQA*CCMLSK
Trigger: CTTGGAAAGCATGCAGCACAATGCCTGGGGTGCAGC...GTTTTCAAACAAGTCACTACTTATGAGTTTCCTCATCTGTGAAGGGAAGTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTTCTGAAAGTCCTTCCTaGCTGTGCAACAAATATGAC +
Preference number: 5 (lower is better)
Translates to: GPKRSSHVVSGNAEAVDCSESPS*LCNKYD
Trigger: GTCATATTTGTTGCACAGCAAGGAAGGACTTTCAGA...ACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CCCAACCCACAAGGACAGTATGGCTCTGCTCCTTCTTATAGGCATATATGGCTATCTGAAAGTCCTTCCTaGCTGTGCAACAAATATGAC +
Preference number: 5 (lower is better)
Translates to: PNPQGQYGSAPSYRHIWLSESPS*LCNKYD
Trigger: GTCATATTTGTTGCACAGCAAGGAAGGACTTTCAGA...TAGCCATATATGCCTATAAGAAGGAGCAGAGCCATACTGTCCTTGTGGGTTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GGCCGTGGACTACACGATAAGGGCAAAGGAATTCAAAACAAGAGTGCCCAGCCAATAGAAAATCTCATTTaGGCTCCCTTAGACTTCTCA +
Preference number: 5 (lower is better)
Translates to: GRGLHDKGKGIQNKSAQPIENLI*APLDFS
Trigger: TGAGAAGTCTAAGGGAGCCAAAATGAGATTTTCTAT...TGGCTGGGCACTCTTGTTTTGAATTCCTTTGCCCTTATCGTGTAGTCCACGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AAGGGTAATTCACTTTCTAGAACAGCTGCCTCTCAGCAACCAGCAAGATCTCCTTATTTGTGCTATGATTaGGAACGTTACACCAGGCCC +
Preference number: 5 (lower is better)
Translates to: KGNSLSRTAASQQPARSPYLCYD*ERYTRP
Trigger: GGGCCTGGTGTAACGTTCCAAATCATAGCACAAATA...AGGAGATCTTGCTGGTTGCTGAGAGGCAGCTGTTCTAGAAAGTGAATTACCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GTTGTGAATGTATCTTGTGGTCCATCCAGAGACATGTCTAATCTGCAAGTATCTCCCCTTGGCCAAGACTaGGAGTTTGGCTTTGACTCT +
Preference number: 5 (lower is better)
Translates to: VVNVSCGPSRDMSNLQVSPLGQD*EFGFDS
Trigger: AGAGTCAAAGCCAAACTCCAAGTCTTGGCCAAGGGG...AGATACTTGCAGATTAGACATGTCTCTGGATGGACCACAAGATACATTCACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CATCACTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTATACCTCATCTTCCTaGACCTATAAGACTAGCTCC +
Preference number: 5 (lower is better)
Translates to: HHWDLKEAHMWSLEMLKLYTSSS*TYKTSS
Trigger: GGAGCTAGTCTTATAGGTCAAGGAAGATGAGGTATA...CAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAGTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GGTCACTCAAACATCACACATAGAATCTATTTAATGAGGCTTTCCCATGTGAACGCTCTCAGTGTGGTCTaGTCTGCCAGGCCTGTGATT +
Preference number: 5 (lower is better)
Translates to: GHSNITHRIYLMRLSHVNALSVV*SARPVI
Trigger: AATCACAGGCCTGGCAGACAAGACCACACTGAGAGC...GTTCACATGGGAAAGCCTCATTAAATAGATTCTATGTGTGATGTTTGAGTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATATTCTTGGCAGCTTCTTaGATTTGTTCCACTTCATCC +
Preference number: 5 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCIFLAAS*ICSTSS
Trigger: GGATGAAGTGGAACAAATCAAAGAAGCTGCCAAGAA...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp TCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTCCCCAAATAAGTaGATTTTGGCTTCGGCCTCA +
Preference number: 5 (lower is better)
Translates to: SHVVSGNAEAVDCRHYFQSSPNK*ILASAS
Trigger: TGAGGCCGAAGCCAAAATCAACTTATTTGGGGAGGA...CTGAAAATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GTTGTGAATGTATCTTGTGGTCCATCCAGAGACATGTCTAATCTGCAAGTATCTGGCATTCTATCCAGATaGTGCTCTAATGGACAGGGC +
Preference number: 5 (lower is better)
Translates to: VVNVSCGPSRDMSNLQVSGILSR*CSNGQG
Trigger: GCCCTGTCCATTAGAGCACAATCTGGATAGAATGCC...AGATACTTGCAGATTAGACATGTCTCTGGATGGACCACAAGATACATTCACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CCTGGTATCTGTGGCATAGCACAGGGACCCAATAAGGCGGAAATCTCAATGAAACTGTGTGTCTCCACATaGAAACAGATGACTAAACTT +
Preference number: 5 (lower is better)
Translates to: PGICGIAQGPNKAEISMKLCVST*KQMTKL
Trigger: AAGTTTAGTCATCTGTTTCAATGTGGAGACACACAG...TTTCATTGAGATTTCCGCCTTATTGGGTCCCTGTGCTATGCCACAGATACCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CCCAACCCACAAGGACAGTATGGCTCTGCTCCTTCTTATAGGCATATATGGCTACTGTGTGTCTCCACATaGAAACAGATGACTAAACTT +
Preference number: 5 (lower is better)
Translates to: PNPQGQYGSAPSYRHIWLLCVST*KQMTKL
Trigger: AAGTTTAGTCATCTGTTTCAATGTGGAGACACACAG...TAGCCATATATGCCTATAAGAAGGAGCAGAGCCATACTGTCCTTGTGGGTTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CATGACTTAACCATACCCACGTCTTCACCATCCTCACTATATCACACTTGCACTTATTTGTGCTATGATTaGGAACGTTACACCAGGCCC +
Preference number: 5 (lower is better)
Translates to: HDLTIPTSSPSSLYHTCTYLCYD*ERYTRP
Trigger: GGGCCTGGTGTAACGTTCCAAATCATAGCACAAATA...AGTGCAAGTGTGATATAGTGAGGATGGTGAAGACGTGGGTATGGTTAAGTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTGGTTTCTCCCTTTTGGGCTTGGTGACCATATaGAGCACACTGAAAAAGACC +
Preference number: 5 (lower is better)
Translates to: KHLVPALPLVFYSGFSLLGLVTI*STLKKT
Trigger: GGTCTTTTTCAGTGTGCTCAATATGGTCACCAAGCC...CAAAAGGGAGAAACCACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367838.5
CDS-3UTR CAA 90 bp GAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTGGCAGCTTCTTTGATTaGTTCCACTTCATCCTCAAA +
Preference number: 5 (lower is better)
Translates to: EAHMWSLEMLKLWTVDIIGSFFD*FHFILK
Trigger: TTTGAGGATGAAGTGGAACAAATCAAAGAAGCTGCC...AATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTCTTGGCAGCTTCTTaGATTTGTTCCACTTCATCC +
Preference number: 5 (lower is better)
Translates to: RSSHVVSGNAEAVDCRHYFLAAS*ICSTSS
Trigger: GGATGAAGTGGAACAAATCAAAGAAGCTGCCAAGAA...ATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp TCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGCCAAATAAGTTGATTTaGGCTTCGGCCTCAATGGCT +
Preference number: 5 (lower is better)
Translates to: SHVVSGNAEAVDCRHYFQPNKLI*ASASMA
Trigger: AGCCATTGAGGCCGAAGCCAAAATCAACTTATTTGG...CTGAAAATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GGTCACTCAAACATCACACATAGAATCTATTTAATGAGGCTTTCCCATGTGAACCACACTTTAGTGGTATaGCCTACAGAGCCTAGCCTG +
Preference number: 5 (lower is better)
Translates to: GHSNITHRIYLMRLSHVNHTLVV*PTEPSL
Trigger: CAGGCTAGGCTCTGTAGGCAATACCACTAAAGTGTG...GTTCACATGGGAAAGCCTCATTAAATAGATTCTATGTGTGATGTTTGAGTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp ATACAAAGGTCGGTCCGTGGGTCTGCTTTTGTGTTTTACCTATCTCTGCTTTACGTCCTAAATGTGGTCTaGTCAAAACCAGAAGACACA +
Preference number: 5 (lower is better)
Translates to: IQRSVRGSAFVFYLSLLYVLNVV*SKPEDT
Trigger: TGTGTCTTCTGGTTTTGACAAGACCACATTTAGGAC...GTAAAGCAGAGATAGGTAAAACACAAAAGCAGACCCACGGACCGACCTTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CTAAACTTCCCTTCACAGATGAGGAAACTCATAAGTAGTGACTTGTTTGAAAACGGCACTAGATGGCCCTaGTCTTACACTCCTCAACTC +
Preference number: 5 (lower is better)
Translates to: LNFPSQMRKLISSDLFENGTRWP*SYTPQL
Trigger: GAGTTGAGGAGTGTAAGACAAGGGCCATCTAGTGCC...GTTTTCAAACAAGTCACTACTTATGAGTTTCCTCATCTGTGAAGGGAAGTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp TTAATTCTGGAAATGAAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTGGCACTAGATGGCCCTaGTCTTACACTCCTCAACTC +
Preference number: 5 (lower is better)
Translates to: LILEMKHLVPALPLVFYSGTRWP*SYTPQL
Trigger: GAGTTGAGGAGTGTAAGACAAGGGCCATCTAGTGCC...ACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTTCATTTCCAGAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp ATACAAAGGTCGGTCCGTGGGTCTGCTTTTGTGTTTTACCTATCTCTGCTTTACTGTTGTGAATGTATCTaGTGGTCCATCCAGAGACAT +
Preference number: 5 (lower is better)
Translates to: IQRSVRGSAFVFYLSLLYCCECI*WSIQRH
Trigger: ATGTCTCTGGATGGACCACAAGATACATTCACAACA...GTAAAGCAGAGATAGGTAAAACACAAAAGCAGACCCACGGACCGACCTTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CATCACTGGGACCTAAAAGAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGAGAATGATTTTATCTTaGTACAAACAGGCCAGTAGC +
Preference number: 5 (lower is better)
Translates to: HHWDLKEAHMWSLEMLKLRMILS*YKQASS
Trigger: GCTACTGGCCTGTTTGTACAAAGATAAAATCATTCT...CAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTCTTTTAGGTCCCAGTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GTTGTGAATGTATCTTGTGGTCCATCCAGAGACATGTCTAATCTGCAAGTATCTCCAGGCCCTGGGGATTaGATCATCTTTGATAGTCAT +
Preference number: 5 (lower is better)
Translates to: VVNVSCGPSRDMSNLQVSPGPGD*IIFDSH
Trigger: ATGACTATCAAAGATGATCAAATCCCCAGGGCCTGG...AGATACTTGCAGATTAGACATGTCTCTGGATGGACCACAAGATACATTCACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GACTTGACTTTGCTAGTTATTAGAATCGGTATCCACAGGTCCTGCTCCCTAAATTATTTGTGCTATGATTaGGAACGTTACACCAGGCCC +
Preference number: 5 (lower is better)
Translates to: DLTLLVIRIGIHRSCSLNYLCYD*ERYTRP
Trigger: GGGCCTGGTGTAACGTTCCAAATCATAGCACAAATA...ATTTAGGGAGCAGGACCTGTGGATACCGATTCTAATAACTAGCAAAGTCAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp TTAATTCTGGAAATGAAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTCCCCTTGGCCAAGACTaGGAGTTTGGCTTTGACTCT +
Preference number: 5 (lower is better)
Translates to: LILEMKHLVPALPLVFYSPLGQD*EFGFDS
Trigger: AGAGTCAAAGCCAAACTCCAAGTCTTGGCCAAGGGG...ACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTTCATTTCCAGAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CTAAACTTCCCTTCACAGATGAGGAAACTCATAAGTAGTGACTTGTTTGAAAACGCCACACACATCCATTaGAACTCGTCAAACTCCACG +
Preference number: 5 (lower is better)
Translates to: LNFPSQMRKLISSDLFENATHIH*NSSNST
Trigger: CGTGGAGTTTGACGAGTTCAAATGGATGTGTGTGGC...GTTTTCAAACAAGTCACTACTTATGAGTTTCCTCATCTGTGAAGGGAAGTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AATCTACCTTCTGCCAACCAAAGCAGAGAAGTCCTGAACTTATTTAGTCATGATATGCCCAGTAGTTCTTaGCGAACTGTCTTGTTCCAG +
Preference number: 5 (lower is better)
Translates to: NLPSANQSREVLNLFSHDMPSSS*RTVLFQ
Trigger: CTGGAACAAGACAGTTCGCAAAGAACTACTGGGCAT...ATCATGACTAAATAAGTTCAGGACTTCTCTGCTTTGGTTGGCAGAAGGTAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CTAAACTTCCCTTCACAGATGAGGAAACTCATAAGTAGTGACTTGTTTGAAAACCACACTTTAGTGGTATaGCCTACAGAGCCTAGCCTG +
Preference number: 5 (lower is better)
Translates to: LNFPSQMRKLISSDLFENHTLVV*PTEPSL
Trigger: CAGGCTAGGCTCTGTAGGCAATACCACTAAAGTGTG...GTTTTCAAACAAGTCACTACTTATGAGTTTCCTCATCTGTGAAGGGAAGTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGTCATTGGTTGTTCACTaGTTTACAGAAAGACCACAT +
Preference number: 5 (lower is better)
Translates to: NAEAVDCRHYFQSLSWWLSLVVH*FTERPH
Trigger: ATGTGGTCTTTCTGTAAACAAGTGAACAACCAATGA...CAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AAGGGTAATTCACTTTCTAGAACAGCTGCCTCTCAGCAACCAGCAAGATCTCCTTATCTAAGAGGCATATaGTCGGGATGGAAAATATTC +
Preference number: 5 (lower is better)
Translates to: KGNSLSRTAASQQPARSPYLRGI*SGWKIF
Trigger: GAATATTTTCCATCCCGACAATATGCCTCTTAGATA...AGGAGATCTTGCTGGTTGCTGAGAGGCAGCTGTTCTAGAAAGTGAATTACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp TCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGCTCACTATATCACACTaGCACTGGGGTAAAATGAGA +
Preference number: 5 (lower is better)
Translates to: SHVVSGNAEAVDCRHYFQLTISH*HWGKMR
Trigger: TCTCATTTTACCCCAGTGCAAGTGTGATATAGTGAG...CTGAAAATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GAAGCTCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTAAGGTCAAGCTGTATTaGTGCTATGATTTGGAACGT +
Preference number: 5 (lower is better)
Translates to: EAHMWSLEMLKLWTVDIIKVKLY*CYDLER
Trigger: ACGTTCCAAATCATAGCACAAATACAGCTTGACCTT...AATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGAGCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp ATACAAAGGTCGGTCCGTGGGTCTGCTTTTGTGTTTTACCTATCTCTGCTTTACAAGGTCAAGCTGTATTaGTGCTATGATTTGGAACGT +
Preference number: 5 (lower is better)
Translates to: IQRSVRGSAFVFYLSLLYKVKLY*CYDLER
Trigger: ACGTTCCAAATCATAGCACAAATACAGCTTGACCTT...GTAAAGCAGAGATAGGTAAAACACAAAAGCAGACCCACGGACCGACCTTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GACTTGACTTTGCTAGTTATTAGAATCGGTATCCACAGGTCCTGCTCCCTAAATTATACCTCATCTTCCTaGACCTATAAGACTAGCTCC +
Preference number: 5 (lower is better)
Translates to: DLTLLVIRIGIHRSCSLNYTSSS*TYKTSS
Trigger: GGAGCTAGTCTTATAGGTCAAGGAAGATGAGGTATA...ATTTAGGGAGCAGGACCTGTGGATACCGATTCTAATAACTAGCAAAGTCAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CTGAAGCTGTGGACTGTAGACATTATTTTCAGTCCTTGTCCTGGTGGCTGCATATTTGTTTTTCGAGGGTaGGTTTTTAACCACTTCTTC +
Preference number: 5 (lower is better)
Translates to: LKLWTVDIIFSPCPGGCIFVFRG*VFNHFF
Trigger: GAAGAAGTGGTTAAAAACCAACCCTCGAAAAACAAA...TATGCAGCCACCAGGACAAGGACTGAAAATAATGTCTACAGTCCACAGCTTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AGGCCAGCTATTTTCATTGGTCACTCAAACATCACACATAGAATCTATTTAATGCACACTTTAGTGGTATaGCCTACAGAGCCTAGCCTG +
Preference number: 5 (lower is better)
Translates to: RPAIFIGHSNITHRIYLMHTLVV*PTEPSL
Trigger: CAGGCTAGGCTCTGTAGGCAATACCACTAAAGTGTG...CATTAAATAGATTCTATGTGTGATGTTTGAGTGACCAATGAAAATAGCTGGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTGGTTTCTCCCTTTTGAACCACGACTTGACTTaGCTAGTTATTAGAATCGGT +
Preference number: 5 (lower is better)
Translates to: KHLVPALPLVFYSGFSLLNHDLT*LVIRIG
Trigger: ACCGATTCTAATAACTAGCAAAGTCAAGTCGTGGTT...CAAAAGGGAGAAACCACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CATGACTTAACCATACCCACGTCTTCACCATCCTCACTATATCACACTTGCACTAATGAGATAAAGCATTaGGAAGTACCTAACACAGCA +
Preference number: 5 (lower is better)
Translates to: HDLTIPTSSPSSLYHTCTNEIKH*EVPNTA
Trigger: TGCTGTGTTAGGTACTTCCAAATGCTTTATCTCATT...AGTGCAAGTGTGATATAGTGAGGATGGTGAAGACGTGGGTATGGTTAAGTCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp GGTCACTCAAACATCACACATAGAATCTATTTAATGAGGCTTTCCCATGTGAACTATAAGACTAGCTCCTaGCTTTTCTCATCCCCTTGG +
Preference number: 5 (lower is better)
Translates to: GHSNITHRIYLMRLSHVNYKTSS*LFSSPW
Trigger: CCAAGGGGATGAGAAAAGCAAGGAGCTAGTCTTATA...GTTCACATGGGAAAGCCTCATTAAATAGATTCTATGTGTGATGTTTGAGTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp TTAATTCTGGAAATGAAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTCCAAATAAGTTGATTTaGGCTTCGGCCTCAATGGCT +
Preference number: 5 (lower is better)
Translates to: LILEMKHLVPALPLVFYSPNKLI*ASASMA
Trigger: AGCCATTGAGGCCGAAGCCAAAATCAACTTATTTGG...ACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTTCATTTCCAGAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp CTAAACTTCCCTTCACAGATGAGGAAACTCATAAGTAGTGACTTGTTTGAAAACCCAAATAAGTTGATTTaGGCTTCGGCCTCAATGGCT +
Preference number: 5 (lower is better)
Translates to: LNFPSQMRKLISSDLFENPNKLI*ASASMA
Trigger: AGCCATTGAGGCCGAAGCCAAAATCAACTTATTTGG...GTTTTCAAACAAGTCACTACTTATGAGTTTCCTCATCTGTGAAGGGAAGTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AATCTACCTTCTGCCAACCAAAGCAGAGAAGTCCTGAACTTATTTAGTCATGATTGTTGTGAATGTATCTaGTGGTCCATCCAGAGACAT +
Preference number: 5 (lower is better)
Translates to: NLPSANQSREVLNLFSHDCCECI*WSIQRH
Trigger: ATGTCTCTGGATGGACCACAAGATACATTCACAACA...ATCATGACTAAATAAGTTCAGGACTTCTCTGCTTTGGTTGGCAGAAGGTAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AATCTACCTTCTGCCAACCAAAGCAGAGAAGTCCTGAACTTATTTAGTCATGATTCTGAAAGTCCTTCCTaGCTGTGCAACAAATATGAC +
Preference number: 5 (lower is better)
Translates to: NLPSANQSREVLNLFSHDSESPS*LCNKYD
Trigger: GTCATATTTGTTGCACAGCAAGGAAGGACTTTCAGA...ATCATGACTAAATAAGTTCAGGACTTCTCTGCTTTGGTTGGCAGAAGGTAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp TCACATGTGGTCTCTGGAAATGCTGAAGCTGTGGACTGTAGACATTATTTTCAGATAGAAAATCTCATTTaGGCTCCCTTAGACTTCTCA +
Preference number: 5 (lower is better)
Translates to: SHVVSGNAEAVDCRHYFQIENLI*APLDFS
Trigger: TGAGAAGTCTAAGGGAGCCAAAATGAGATTTTCTAT...CTGAAAATAATGTCTACAGTCCACAGCTTCAGCATTTCCAGAGACCACATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp TTAATTCTGGAAATGAAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTTTCTTGGCAGCTTCTTaGATTTGTTCCACTTCATCC +
Preference number: 5 (lower is better)
Translates to: LILEMKHLVPALPLVFYSFLAAS*ICSTSS
Trigger: GGATGAAGTGGAACAAATCAAAGAAGCTGCCAAGAA...ACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTTCATTTCCAGAATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271357.9
ENST00000367838.5
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AATCTACCTTCTGCCAACCAAAGCAGAGAAGTCCTGAACTTATTTAGTCATGATAAGGTCAAGCTGTATTaGTGCTATGATTTGGAACGT +
Preference number: 5 (lower is better)
Translates to: NLPSANQSREVLNLFSHDKVKLY*CYDLER
Trigger: ACGTTCCAAATCATAGCACAAATACAGCTTGACCTT...ATCATGACTAAATAAGTTCAGGACTTCTCTGCTTTGGTTGGCAGAAGGTAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AATCTACCTTCTGCCAACCAAAGCAGAGAAGTCCTGAACTTATTTAGTCATGATATTAGCCAGGGATTTTaGTTTTTCGAGGGTTGGTTT +
Preference number: 5 (lower is better)
Translates to: NLPSANQSREVLNLFSHDISQGF*FFEGWF
Trigger: AAACCAACCCTCGAAAAACAAAAATCCCTGGCTAAT...ATCATGACTAAATAAGTTCAGGACTTCTCTGCTTTGGTTGGCAGAAGGTAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp AGGCCAGCTATTTTCATTGGTCACTCAAACATCACACATAGAATCTATTTAATGTTCTTGGCAGCTTCTTaGATTTGTTCCACTTCATCC +
Preference number: 5 (lower is better)
Translates to: RPAIFIGHSNITHRIYLMFLAAS*ICSTSS
Trigger: GGATGAAGTGGAACAAATCAAAGAAGCTGCCAAGAA...CATTAAATAGATTCTATGTGTGATGTTTGAGTGACCAATGAAAATAGCTGGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS-3UTR CAA 90 bp TTAATTCTGGAAATGAAACACCTAGTACCTGCCCTTCCTCTTGTCTTTTATAGTCTGTGTGTCTCCACATaGAAACAGATGACTAAACTT +
Preference number: 5 (lower is better)
Translates to: LILEMKHLVPALPLVFYSLCVST*KQMTKL
Trigger: AAGTTTAGTCATCTGTTTCAATGTGGAGACACACAG...ACTATAAAAGACAAGAGGAAGGGCAGGTACTAGGTGTTTCATTTCCAGAATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS TCA 90 bp CGAGTAGAGGAGAGGGTCCTACTAAAAGGAACTTTATATTCTGAGTaGTTCTTCCTACAGTCTGAATTTCTATCACCACAGTTAAAATAT +
Preference number: 5 (lower is better)
Translates to: RVEERVLLKGTLYSE*FFLQSEFLSPQLKY
Trigger: ATATTTTAACTGTGGTGATAGAAATTCAGACTGTAGGAAGAATCACTCAGAATATAAAGTTCCTTTTAGTAGGACCCTCTCCTCTACTCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478868.1
CDS-3UTR CAA 90 bp AGGCCAGCTATTTTCATTGGTCACTCAAACATCACACATAGAATCTATTTAATGAGAATGATTTTATCTTaGTACAAACAGGCCAGTAGC +
Preference number: 5 (lower is better)
Translates to: RPAIFIGHSNITHRIYLMRMILS*YKQASS
Trigger: GCTACTGGCCTGTTTGTACAAAGATAAAATCATTCT...CATTAAATAGATTCTATGTGTGATGTTTGAGTGACCAATGAAAATAGCTGGCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
CDS TCA 72 bp TTTCCAAGAACCAGCCGAATCTCCCTCCCGCAGATCTaGGGGGCAGAGCCGCCCATCCGGCGGCGCCGGGCC +
Preference number: 6 (lower is better)
Translates to: FPRTSRISLPQI*GAEPPIRRRRA
Trigger: GGCCCGGCGCCGCCGGATGGGCGGCTCTGCCCCTCAGATCTGCGGGAGGGAGATTCGGCTGGTTCTTGGAAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367836.5
CDS GCA 72 bp GGGAGACAGCGCCCTGAGTCCCGGCTGGGAGAAGGCTaGTCACCTGGTCCTCACGGATTCCAGCCGAGGGGC +
Preference number: 6 (lower is better)
Translates to: GRQRPESRLGEG*SPGPHGFQPRG
Trigger: GCCCCTCGGCTGGAATCCGTGAGGACCAGGTGAGCAGCCTTCTCCCAGCCGGGACTCAGGGCGCTGTCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367836.5
CDS TCA 72 bp GCTCACCTGGTCCTCACGGATTCCAGCCGAGGGGCGTaGCCGCTTCTCCCCACACCCTTTGCCCTGAGCGGG +
Preference number: 6 (lower is better)
Translates to: AHLVLTDSSRGA*PLLPTPFALSG
Trigger: CCCGCTCAGGGCAAAGGGTGTGGGGAGAAGCGGTCACGCCCCTCGGCTGGAATCCGTGAGGACCAGGTGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367836.5
CDS CCA 72 bp GGAGGAGTTGAGGCTCATGGTCAGTGCACCTCGGCGTaGGGTGGGCAGAGCATGCTGGACGACGAGGAGCGG +
Preference number: 6 (lower is better)
Translates to: GGVEAHGQCTSA*GGQSMLDDEER
Trigger: CCGCTCCTCGTCGTCCAGCATGCTCTGCCCACCCCACGCCGAGGTGCACTGACCATGAGCCTCAACTCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682931.1
CDS TCA 72 bp CGGGCCAGCCTCTCAGGCTGCAGCCCCACGGCACCCTaGGGCCCTCATCTCTGCTCGGCAGCTAAAACATCT +
Preference number: 6 (lower is better)
Translates to: RASLSGCSPTAP*GPHLCSAAKTS
Trigger: AGATGTTTTAGCTGCCGAGCAGAGATGAGGGCCTCAGGGTGCCGTGGGGCTGCAGCCTGAGAGGCTGGCCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000478868.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS TCA 72 bp AAAGACCTGGTCCTCACGGATTCCAGCCGAGGGGCGTaGCCGCTTCTCCCCACACCCTTTGCCCTGAGCGGG +
Preference number: 6 (lower is better)
Translates to: KDLVLTDSSRGA*PLLPTPFALSG
Trigger: CCCGCTCAGGGCAAAGGGTGTGGGGAGAAGCGGTCACGCCCCTCGGCTGGAATCCGTGAGGACCAGGTCTTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367838.5
CDS CCA 72 bp GGGGGTGGCAGACAGCGCTGGCAAAGGACAGCCATGTaGCCCAAGTCTCCAGGCTCGGGGAGACGGAGCTTT +
Preference number: 6 (lower is better)
Translates to: GGGRQRWQRTAM*PKSPGSGRRSF
Trigger: AAAGCTCCGTCTCCCCGAGCCTGGAGACTTGGGCCACATGGCTGTCCTTTGCCAGCGCTGTCTGCCACCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000493800.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS CCA 72 bp GTCAGTGCACCTCGGCGTGGGGTGGGCAGAGCATGCTaGACGACTTTCATTCATCCAGCCGACGGGCACGAG +
Preference number: 6 (lower is better)
Translates to: VSAPRRGVGRAC*TTFIHPADGHE
Trigger: CTCGTGCCCGTCGGCTGGATGAATGAAAGTCGTCCAGCATGCTCTGCCCACCCCACGCCGAGGTGCACTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271357.9
CDS CCA 72 bp GGAGGAGTTGAGGCTCATGGTCAGTGCACCTCGGCGTaGGGTGGGCAGAGCATGCTGGACGACTCCTCTTGC +
Preference number: 6 (lower is better)
Translates to: GGVEAHGQCTSA*GGQSMLDDSSC
Trigger: GCAAGAGGAGTCGTCCAGCATGCTCTGCCCACCCCACGCCGAGGTGCACTGACCATGAGCCTCAACTCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537209.5
CDS GCA 72 bp ATGGTCAGTGCACCTCGGCGTGGGGTGGGCAGAGCATaGTGGACGACTTTCATTCATCCAGCCGACGGGCAC +
Preference number: 6 (lower is better)
Translates to: MVSAPRRGVGRA*WTTFIHPADGH
Trigger: GTGCCCGTCGGCTGGATGAATGAAAGTCGTCCAGCATGCTCTGCCCACCCCACGCCGAGGTGCACTGACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271357.9
CDS CCA 72 bp GTCAGTGCACCTCGGCGTGGGGTGGGCAGAGCATGCTaGACGACTGTAATCCCGGCTATTCAGGAGGCTGAG +
Preference number: 6 (lower is better)
Translates to: VSAPRRGVGRAC*TTVIPAIQEAE
Trigger: CTCAGCCTCCTGAATAGCCGGGATTACAGTCGTCCAGCATGCTCTGCCCACCCCACGCCGAGGTGCACTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367835.1
ENST00000367838.5
CDS CCA 72 bp GGAGGAGTTGAGGCTCATGGTCAGTGCACCTCGGCGTaGGGTGGGCAGAGCATGCTGGACGACTGTAATCCC +
Preference number: 6 (lower is better)
Translates to: GGVEAHGQCTSA*GGQSMLDDCNP
Trigger: GGGATTACAGTCGTCCAGCATGCTCTGCCCACCCCACGCCGAGGTGCACTGACCATGAGCCTCAACTCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367835.1
ENST00000367838.5
CDS GCA 72 bp CAGTCCCGCCGTGGACGATCCTGGTATCGCCTTTGCTaGTCACCTTTCATTCATCCAGCCGACGGGCACGAG +
Preference number: 6 (lower is better)
Translates to: QSRRGRSWYRLC*SPFIHPADGHE
Trigger: CTCGTGCCCGTCGGCTGGATGAATGAAAGGTGAGCAGCAAAGGCGATACCAGGATCGTCCACGGCGGGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367835.1
ENST00000537209.5
CDS GCA 72 bp CTCCAGTCCCGCCGTGGACGATCCTGGTATCGCCTTTaGTGCTCACCTTTCATTCATCCAGCCGACGGGCAC +
Preference number: 6 (lower is better)
Translates to: LQSRRGRSWYRL*CSPFIHPADGH
Trigger: GTGCCCGTCGGCTGGATGAATGAAAGGTGAGCAGCAAAGGCGATACCAGGATCGTCCACGGCGGGACTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367835.1
ENST00000537209.5
CDS GCA 72 bp ATGGTCAGTGCACCTCGGCGTGGGGTGGGCAGAGCATaGTGGACGACTGTAATCCCGGCTATTCAGGAGGCT +
Preference number: 6 (lower is better)
Translates to: MVSAPRRGVGRA*WTTVIPAIQEA
Trigger: AGCCTCCTGAATAGCCGGGATTACAGTCGTCCAGCATGCTCTGCCCACCCCACGCCGAGGTGCACTGACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367835.1
ENST00000367838.5
CDS CCA 72 bp TCCAGAGTCCATAGATCAGGGGGTGGCAGACAGCGCTaGCAAAGGACAGCCATGTGGCCCAAGTCTCCAGGC +
Preference number: 6 (lower is better)
Translates to: SRVHRSGGGRQR*QRTAMWPKSPG
Trigger: GCCTGGAGACTTGGGCCACATGGCTGTCCTTTGCCAGCGCTGTCTGCCACCCCCTGATCTATGGACTCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000493800.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS CCA 72 bp ACATCTCCTTCTTCGATGCTCTGCAACTGCAGCCTCTaGCTCACAAGAGTTCTGCTGCCTCGGCGGCCCCCG +
Preference number: 6 (lower is better)
Translates to: TSPSSMLCNCSL*LTRVLLPRRPP
Trigger: CGGGGGCCGCCGAGGCAGCAGAACTCTTGTGAGCCAGAGGCTGCAGTTGCAGAGCATCGAAGAAGGAGATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000478868.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS CCA 72 bp GGAGGAGTTGAGGCTCATGGTCAGTGCACCTCGGCGTaGGGTGGGCAGAGCATGCTGGACGACTGGAAAGAT +
Preference number: 6 (lower is better)
Translates to: GGVEAHGQCTSA*GGQSMLDDWKD
Trigger: ATCTTTCCAGTCGTCCAGCATGCTCTGCCCACCCCACGCCGAGGTGCACTGACCATGAGCCTCAACTCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493800.1
CDS CAA 72 bp TCCTCCTCCACGATGACGACTGTGCCACAGTGCACCTaGCGTGCCTTGACCCTGGCCACGCGGAAGATGAAG +
Preference number: 6 (lower is better)
Translates to: SSSTMTTVPQCT*RALTLATRKMK
Trigger: CTTCATCTTCCGCGTGGCCAGGGTCAAGGCACGCAAGGTGCACTGTGGCACAGTCGTCATCGTGGAGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000493800.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS CAA 72 bp CCTCCAGTCCCGCCGTGGACGATCCTGGTATCGCCTTaGCTGCTCACCTTTCATTCATCCAGCCGACGGGCA +
Preference number: 6 (lower is better)
Translates to: PPVPPWTILVSP*LLTFHSSSRRA
Trigger: TGCCCGTCGGCTGGATGAATGAAAGGTGAGCAGCAAAGGCGATACCAGGATCGTCCACGGCGGGACTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367835.1
ENST00000537209.5
CDS CAA 90 bp CATTCTCCTCCTCCAGTCCCGCCGTGGACGATCCTGGTATCGCCTTaGCTGCTCACCTTTCATTCATCCAGCCGACGGGCACGAGCATCC +
Preference number: 6 (lower is better)
Translates to: HSPPPVPPWTILVSP*LLTFHSSSRRARAS
Trigger: GGATGCTCGTGCCCGTCGGCTGGATGAATGAAAGGTGAGCAGCAAAGGCGATACCAGGATCGTCCACGGCGGGACTGGAGGAGGAGAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367835.1
ENST00000537209.5
CDS GCA 72 bp GAGTGGGGAGTGGACGTAAACAGGTCTTCACACTGCTaGCCTGCACTCCCTCGGAACCAAAAGGCCAGGGAG +
Preference number: 6 (lower is better)
Translates to: EWGVDVNRSSHC*PALPRNQKARE
Trigger: CTCCCTGGCCTTTTGGTTCCGAGGGAGTGCAGGGCAGCAGTGTGAAGACCTGTTTACGTCCACTCCCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000537209.5
ENST00000546300.5
CDS GCA 72 bp CTCCACGATGACGACTGTGCCACAGTGCACCTTGCGTaGCTTGACCCTGGCCACGCGGAAGATGAAGCCATA +
Preference number: 6 (lower is better)
Translates to: LHDDDCATVHLA*LDPGHAEDEAI
Trigger: TATGGCTTCATCTTCCGCGTGGCCAGGGTCAAGGCACGCAAGGTGCACTGTGGCACAGTCGTCATCGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000493800.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS GCA 72 bp AGGCATTCCTCCTGCTGCCTGAAGAGGAGGTGGAGGTaGTGGAGTTCTTCCTCCCGGTCCTCTGAGCATCCT +
Preference number: 6 (lower is better)
Translates to: RHSSCCLKRRWR*WSSSSRSSEHP
Trigger: AGGATGCTCAGAGGACCGGGAGGAAGAACTCCAGCACCTCCACCTCCTCTTCAGGCAGCAGGAGGAATGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000493800.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS GCA 72 bp TCCCCTCACTCCTTGCGCCGGGGCACCTTCCACGTATaGTTCAGCTTTCGACATCGCATGCTCAGAGCAGTC +
Preference number: 6 (lower is better)
Translates to: SPHSLRRGTFHV*FSFRHRMLRAV
Trigger: GACTGCTCTGAGCATGCGATGTCGAAAGCTGAAGCATACGTGGAAGGTGCCCCGGCGCAAGGAGTGAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478868.1
CDS GCA 72 bp CCCGTTCATCCAAACCCATCATCAAGTGGAGCTGACTaGGCCGCAGCACGTGCCCAAGAAACACCCGCCTGT +
Preference number: 6 (lower is better)
Translates to: PVHPNPSSSGAD*AAARAQETPAC
Trigger: ACAGGCGGGTGTTTCTTGGGCACGTGCTGCGGCGCAGTCAGCTCCACTTGATGATGGGTTTGGATGAACGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478868.1
CDS CCA 72 bp GGAGGAGTTGAGGCTCATGGTCAGTGCACCTCGGCGTaGGGTGGGCAGAGCATGCTGGACGACTTTCATTCA +
Preference number: 6 (lower is better)
Translates to: GGVEAHGQCTSA*GGQSMLDDFHS
Trigger: TGAATGAAAGTCGTCCAGCATGCTCTGCCCACCCCACGCCGAGGTGCACTGACCATGAGCCTCAACTCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271357.9
CDS CCA 72 bp CCTGAAAGGCATTCCTCCTGCTGCCTGAAGAGGAGGTaGAGGTGCTGGAGTTCTTCCTCCCGGTCCTCTGAG +
Preference number: 6 (lower is better)
Translates to: PERHSSCCLKRR*RCWSSSSRSSE
Trigger: CTCAGAGGACCGGGAGGAAGAACTCCAGCACCTCCACCTCCTCTTCAGGCAGCAGGAGGAATGCCTTTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000493800.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS CAA 90 bp TCTCATCCCATATGCCTTTGTCCAAAGGTTGCACGGGGGTTAAGCTaGGCCCAGAAGGCGCCGAGGGCTGGTCGAGTTCTCCCCTTTCCA +
Preference number: 6 (lower is better)
Translates to: SHPICLCPKVARGLS*AQKAPRAGRVLPFP
Trigger: TGGAAAGGGGAGAACTCGACCAGCCCTCGGCGCCTTCTGGGCCAAGCTTAACCCCCGTGCAACCTTTGGACAAAGGCATATGGGATGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367836.5
CDS CAA 90 bp ACGCACAGTGCACCAGGCCAACAGACGTTCTCATCCCATATGCCTTaGTCCAAAGGTTGCACGGGGGTTAAGCTTGGCCCAGAAGGCGCC +
Preference number: 6 (lower is better)
Translates to: THSAPGQQTFSSHMP*SKGCTGVKLGPEGA
Trigger: GGCGCCTTCTGGGCCAAGCTTAACCCCCGTGCAACCTTTGGACAAAGGCATATGGGATGAGAACGTCTGTTGGCCTGGTGCACTGTGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367836.5
CDS CAA 90 bp AAGCCCATGCTCTTTCTTCTGCCTACAGTGCTGTCCCCTCACTCCTaGCGCCGGGGCACCTTCCACGTATGCTTCAGCTTTCGACATCGC +
Preference number: 6 (lower is better)
Translates to: KPMLFLLPTVLSPHS*RRGTFHVCFSFRHR
Trigger: GCGATGTCGAAAGCTGAAGCATACGTGGAAGGTGCCCCGGCGCAAGGAGTGAGGGGACAGCACTGTAGGCAGAAGAAAGAGCATGGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478868.1
CDS TCA 72 bp TTCTCCCGTTCATCCAAACCCATCATCAAGTGGAGCTaGCTGCGCCGCAGCACGTGCCCAAGAAACACCCGC +
Preference number: 6 (lower is better)
Translates to: FSRSSKPIIKWS*LRRSTCPRNTR
Trigger: GCGGGTGTTTCTTGGGCACGTGCTGCGGCGCAGTCAGCTCCACTTGATGATGGGTTTGGATGAACGGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478868.1
CDS TCA 72 bp GTGCACCAGGCCTCTCGGCTCGCCCCACTTTTCTCCTaGAAACCTTTGTGGTGCCTAACTCAGGCCTTCCCT +
Preference number: 6 (lower is better)
Translates to: VHQASRLAPLFS*KPLWCLTQAFP
Trigger: AGGGAAGGCCTGAGTTAGGCACCACAAAGGTTTTCAGGAGAAAAGTGGGGCGAGCCGAGAGGCCTGGTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537209.5
CDS CAA 72 bp ATATGCCTTTGTCCAAAGGTTGCACGGGGGTTAAGCTaGGCCCAGAAGGCGCCGAGGGCTGGTCGAGTTCTC +
Preference number: 6 (lower is better)
Translates to: ICLCPKVARGLS*AQKAPRAGRVL
Trigger: GAGAACTCGACCAGCCCTCGGCGCCTTCTGGGCCAAGCTTAACCCCCGTGCAACCTTTGGACAAAGGCATAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367836.5
CDS CAA 72 bp CAAGAAACACCCGCCTGTCATCCTGTTTCAGGGAGTTaGCAGACAGCCGGTGGGGCTGCGTCAGCCACACAA +
Preference number: 6 (lower is better)
Translates to: QETPACHPVSGS*QTAGGAASATQ
Trigger: TTGTGTGGCTGACGCAGCCCCACCGGCTGTCTGCAAACTCCCTGAAACAGGATGACAGGCGGGTGTTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478868.1
CDS GCA 72 bp GCAGCCGATGAGCGAGTGAAGCCAGATGTAGACAAGTaGCATCACAGCCCGGTTCCCTGTGATCTTCATGGG +
Preference number: 6 (lower is better)
Translates to: AADERVKPDVDK*HHSPVPCDLHG
Trigger: CCCATGAAGATCACAGGGAACCGGGCTGTGATGGCACTTGTCTACATCTGGCTTCACTCGCTCATCGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000493800.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS GCA 72 bp CAGACGTTCTCATCCCATATGCCTTTGTCCAAAGGTTaGACGGGGGTTAAGCTTGGCCCAGAAGGCGCCGAG +
Preference number: 6 (lower is better)
Translates to: QTFSSHMPLSKG*TGVKLGPEGAE
Trigger: CTCGGCGCCTTCTGGGCCAAGCTTAACCCCCGTGCAACCTTTGGACAAAGGCATATGGGATGAGAACGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367836.5
CDS GCA 72 bp AAGAAACACCCGCCTGTCATCCTGTTTCAGGGAGTTTaGAGACAGCCGGTGGGGCTGCGTCAGCCACACAAA +
Preference number: 6 (lower is better)
Translates to: KKHPPVILFQGV*RQPVGLRQPHK
Trigger: TTTGTGTGGCTGACGCAGCCCCACCGGCTGTCTGCAAACTCCCTGAAACAGGATGACAGGCGGGTGTTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478868.1
CDS CCA 72 bp CCCATTCTCCTCCTCCAGTCCCGCCGTGGACGATCCTaGTATCGCCTTTGCTGCTCACCTTTCATTCATCCA +
Preference number: 6 (lower is better)
Translates to: PILLLQSRRGRS*YRLCCSPFIHP
Trigger: TGGATGAATGAAAGGTGAGCAGCAAAGGCGATACCAGGATCGTCCACGGCGGGACTGGAGGAGGAGAATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367835.1
ENST00000537209.5
CDS TCA 72 bp ATTCCTGATAAGGACACAGCGAACAAAGGGCAGGGCTaGGACTCACACCAGATCTGTGTGCCCCGAAGCCCA +
Preference number: 6 (lower is better)
Translates to: IPDKDTANKGQG*DSHQICVPRSP
Trigger: TGGGCTTCGGGGCACACAGATCTGGTGTGAGTCTCAGCCCTGCCCTTTGTTCGCTGTGTCCTTATCAGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478868.1
CDS TCA 72 bp GCCAAGTTATCTGAAGTAGGGGGTTATCTGCCTCAATaGCCAGACCCCAGAAGCATGGCATCTGCCGGCCCA +
Preference number: 6 (lower is better)
Translates to: AKLSEVGGYLPQ*PDPRSMASAGP
Trigger: TGGGCCGGCAGATGCCATGCTTCTGGGGTCTGGTCATTGAGGCAGATAACCCCCTACTTCAGATAACTTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478868.1
CDS TCA 72 bp CACGGGGGAAACGCAACACAGGGAAAACGCGACAGGTaGGAGGCTTATAAAGCACGCAGGTTACCTGAGTCC +
Preference number: 6 (lower is better)
Translates to: HGGNATQGKRDR*EAYKARRLPES
Trigger: GGACTCAGGTAACCTGCGTGCTTTATAAGCCTCTCACCTGTCGCGTTTTCCCTGTGTTGCGTTTCCCCCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493800.1
CDS GCA 72 bp ACAAAGGGCAGGGCTGAGACTCACACCAGATCTGTGTaGCCCGAAGCCCATGCTCTTTCTTCTGCCTACAGT +
Preference number: 6 (lower is better)
Translates to: TKGRAETHTRSV*PEAHALSSAYS
Trigger: ACTGTAGGCAGAAGAAAGAGCATGGGCTTCGGGGCACACAGATCTGGTGTGAGTCTCAGCCCTGCCCTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478868.1
CDS CCA 72 bp TGCACCACACTACACCAAAGATCCATTCCCTGCGGATaGAGCTCGTCACCACAAAAGGCAGCACCAACACGG +
Preference number: 6 (lower is better)
Translates to: CTTLHQRSIPCG*SSSPQKAAPTR
Trigger: CCGTGTTGGTGCTGCCTTTTGTGGTGACGAGCTCCATCCGCAGGGAATGGATCTTTGGTGTAGTGTGGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367838.5
ENST00000493800.1
ENST00000537209.5
ENST00000682931.1
CDS CAA 72 bp CCAGGCTCCCGGTGCCAAGCAGCCACACACATCCATTaGAACTCGTCAAACTCCACGGATGACCAACCAAAC +
Preference number: 6 (lower is better)
Translates to: PGSRCQAATHIH*NSSNSTDDQPN
Trigger: GTTTGGTTGGTCATCCGTGGAGTTTGACGAGTTCAAATGGATGTGTGTGGCTGCTTGGCACCGGGAGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000493800.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS CAA 72 bp GCACCAGGCCAACAGACGTTCTCATCCCATATGCCTTaGTCCAAAGGTTGCACGGGGGTTAAGCTTGGCCCA +
Preference number: 6 (lower is better)
Translates to: APGQQTFSSHMP*SKGCTGVKLGP
Trigger: TGGGCCAAGCTTAACCCCCGTGCAACCTTTGGACAAAGGCATATGGGATGAGAACGTCTGTTGGCCTGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367836.5
CDS TCA 72 bp AGATGTAGACAAGTGCCATCACAGCCCGGTTCCCTGTaGTCTTCATGGGGTACACCATGGGGTACAGGACAG +
Preference number: 6 (lower is better)
Translates to: RCRQVPSQPGSL*SSWGTPWGTGQ
Trigger: CTGTCCTGTACCCCATGGTGTACCCCATGAAGATCACAGGGAACCGGGCTGTGATGGCACTTGTCTACATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000493800.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS TCA 72 bp CACACACATCCATTTGAACTCGTCAAACTCCACGGATaGCCAACCAAACAGGGGTGGCAGGCAGCCGATGAG +
Preference number: 6 (lower is better)
Translates to: HTHPFELVKLHG*PTKQGWQAADE
Trigger: CTCATCGGCTGCCTGCCACCCCTGTTTGGTTGGTCATCCGTGGAGTTTGACGAGTTCAAATGGATGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000493800.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS TCA 72 bp CAGGCTCCCGGTGCCAAGCAGCCACACACATCCATTTaGACTCGTCAAACTCCACGGATGACCAACCAAACA +
Preference number: 6 (lower is better)
Translates to: QAPGAKQPHTSI*TRQTPRMTNQT
Trigger: TGTTTGGTTGGTCATCCGTGGAGTTTGACGAGTTCAAATGGATGTGTGTGGCTGCTTGGCACCGGGAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000493800.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS GCA 72 bp GAAGGAAGAGCTGAGATGGGACCCATCACTCAACAGTaGCCTTCCCCAACACTAGGACCAGTGTCAGATCCA +
Preference number: 6 (lower is better)
Translates to: EGRAEMGPITQQ*PSPTLGPVSDP
Trigger: TGGATCTGACACTGGTCCTAGTGTTGGGGAAGGGCACTGTTGAGTGATGGGTCCCATCTCAGCTCTTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478868.1
CDS CCA 72 bp GCTGAAGAGCCTGGAAGTCCTCTGTCGTTGCACAAATaGTTCCCGATAATACCGGTCCCCAAAGCACATGCC +
Preference number: 6 (lower is better)
Translates to: AEEPGSPLSLHK*FPIIPVPKAHA
Trigger: GGCATGTGCTTTGGGGACCGGTATTATCGGGAACCATTTGTGCAACGACAGAGGACTTCCAGGCTCTTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000493800.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS GCA 72 bp AGAAGTTGCACCACACTACACCAAAGATCCATTCCCTaGGGATGGAGCTCGTCACCACAAAAGGCAGCACCA +
Preference number: 6 (lower is better)
Translates to: RSCTTLHQRSIP*GWSSSPQKAAP
Trigger: TGGTGCTGCCTTTTGTGGTGACGAGCTCCATCCGCAGGGAATGGATCTTTGGTGTAGTGTGGTGCAACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367838.5
ENST00000493800.1
ENST00000537209.5
ENST00000682931.1
CDS GCA 72 bp ACAGTGCACCAGGCCAACAGACGTTCTCATCCCATATaGCTTTGTCCAAAGGTTGCACGGGGGTTAAGCTTG +
Preference number: 6 (lower is better)
Translates to: TVHQANRRSHPI*LCPKVARGLSL
Trigger: CAAGCTTAACCCCCGTGCAACCTTTGGACAAAGGCATATGGGATGAGAACGTCTGTTGGCCTGGTGCACTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367836.5
CDS CAA 90 bp TGTGATCCTGTTGGAAATGCTGAAGAGCCTGGAAGTCCTCTGTCGTaGCACAAATGGTTCCCGATAATACCGGTCCCCAAAGCACATGCC +
Preference number: 6 (lower is better)
Translates to: CDPVGNAEEPGSPLS*HKWFPIIPVPKAHA
Trigger: GGCATGTGCTTTGGGGACCGGTATTATCGGGAACCATTTGTGCAACGACAGAGGACTTCCAGGCTCTTCAGCATTTCCAACAGGATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000493800.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS GCA 72 bp GATTTTGGCTTCGGCCTCAATGGCTTTGGCCAAGCTTaGTGCGTAACTGTCCAAGGACTTGTGTACTTCAGC +
Preference number: 6 (lower is better)
Translates to: DFGFGLNGFGQA*CVTVQGLVYFS
Trigger: GCTGAAGTACACAAGTCCTTGGACAGTTACGCAGCAAGCTTGGCCAAAGCCATTGAGGCCGAAGCCAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000478868.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS GCA 72 bp ATCTCTGCTCGGCAGCTAAAACATCTCCTTCTTCGATaGTCTGCAACTGCAGCCTCTGGCTCACAAGAGTTC +
Preference number: 6 (lower is better)
Translates to: ISARQLKHLLLR*SATAASGSQEF
Trigger: GAACTCTTGTGAGCCAGAGGCTGCAGTTGCAGAGCATCGAAGAAGGAGATGTTTTAGCTGCCGAGCAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000478868.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS GCA 72 bp AATACCGGTCCCCAAAGCACATGCCCAGTAGTTCTTTaGGAACTGTCTTGTTCCAGAGTCCATAGATCAGGG +
Preference number: 6 (lower is better)
Translates to: NTGPQSTCPVVL*ELSCSRVHRSG
Trigger: CCCTGATCTATGGACTCTGGAACAAGACAGTTCGCAAAGAACTACTGGGCATGTGCTTTGGGGACCGGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000493800.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS GCA 72 bp TTTGGCTTCGGCCTCAATGGCTTTGGCCAAGCTTGCTaGGTAACTGTCCAAGGACTTGTGTACTTCAGCTTT +
Preference number: 6 (lower is better)
Translates to: FGFGLNGFGQAC*VTVQGLVYFSF
Trigger: AAAGCTGAAGTACACAAGTCCTTGGACAGTTACGCAGCAAGCTTGGCCAAAGCCATTGAGGCCGAAGCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000478868.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS CAA 72 bp GTTGGAAATGCTGAAGAGCCTGGAAGTCCTCTGTCGTaGCACAAATGGTTCCCGATAATACCGGTCCCCAAA +
Preference number: 6 (lower is better)
Translates to: VGNAEEPGSPLS*HKWFPIIPVPK
Trigger: TTTGGGGACCGGTATTATCGGGAACCATTTGTGCAACGACAGAGGACTTCCAGGCTCTTCAGCATTTCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000493800.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS GCA 72 bp CAAATGGTTCCCGATAATACCGGTCCCCAAAGCACATaGCCAGTAGTTCTTTGCGAACTGTCTTGTTCCAGA +
Preference number: 6 (lower is better)
Translates to: QMVPDNTGPQST*PVVLCELSCSR
Trigger: TCTGGAACAAGACAGTTCGCAAAGAACTACTGGGCATGTGCTTTGGGGACCGGTATTATCGGGAACCATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000271357.9
ENST00000367835.1
ENST00000367836.5
ENST00000367838.5
ENST00000493800.1
ENST00000537209.5
ENST00000539777.5
ENST00000546300.5
ENST00000682931.1
CDS TCA 72 bp TCTTTAGATGCTGTTTCAGAGCACCTCGCAGAGGTGTaGTTACCCGACATAGAGAAGAAACAGTCCTTTGGG +
Preference number: 6 (lower is better)
Translates to: SLDAVSEHLAEV*LPDIEKKQSFG
Trigger: CCCAAAGGACTGTTTCTTCTCTATGTCGGGTAATCACACCTCTGCGAGGTGCTCTGAAACAGCATCTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478868.1
CDS GCA 72 bp AGCATCATATCTGTCCCTAAAACAACGGGCAGATTGTaGATATGTAACTACAATCTAAAGTCCTCCTGGCCT +
Preference number: 6 (lower is better)
Translates to: SIISVPKTTGRL*ICNYNLKSSWP
Trigger: AGGCCAGGAGGACTTTAGATTGTAGTTACATATGCACAATCTGCCCGTTGTTTTAGGGACAGATATGATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478868.1
CDS CAA 72 bp AGCAGCATCATATCTGTCCCTAAAACAACGGGCAGATaGTGCATATGTAACTACAATCTAAAGTCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: SSIISVPKTTGR*CICNYNLKSSW
Trigger: CCAGGAGGACTTTAGATTGTAGTTACATATGCACAATCTGCCCGTTGTTTTAGGGACAGATATGATGCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478868.1