RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPR158 (Homo sapiens)

Ensembl gene IDs: ENSG00000151025

Ensembl transcript IDs: ENST00000376351.4, ENST00000482641.2, ENST00000490549.1, ENST00000650135.1

Found 566 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTTTCTTTGCAAATCTGGTACGTCTTCTGTGTCTCCTGGTTTACCTaGCTTAGGATCTTCAAAGTCCCATGGATACATATTGATCAGGGC +
Preference number: 1 (lower is better)
Translates to: LSLQIWYVFCVSWFT*LRIFKVPWIHIDQG
Trigger: GCCCTGATCAATATGTATCCATGGGACTTTGAAGATCCTAAGCCAGGTAAACCAGGAGACACAGAAGACGTACCAGATTTGCAAAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR CCA 90 bp TGCAAATGGACCTTACATGTTACATGTCGAGCAAGTGGCTCACAATaGCAATTTGCAGGACTTAGACATTTTCCAGTGCTTGGGAGAATG +
Preference number: 1 (lower is better)
Translates to: CKWTLHVTCRASGSQ*QFAGLRHFPVLGRM
Trigger: CATTCTCCCAAGCACTGGAAAATGTCTAAGTCCTGCAAATTGCCATTGTGAGCCACTTGCTCGACATGTAACATGTAAGGTCCATTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR GCA 90 bp TTAGTCGGCAGCTTAGGATTCCCATGCCAAGAGATCAGTGTGGAATaGAATAAGCTTTATAAAATATGCTTTGGGGGCTGCTTTGCTTTG +
Preference number: 1 (lower is better)
Translates to: LVGSLGFPCQEISVE*NKLYKICFGGCFAL
Trigger: CAAAGCAAAGCAGCCCCCAAAGCATATTTTATAAAGCTTATTGCATTCCACACTGATCTCTTGGCATGGGAATCCTAAGCTGCCGACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR CCA 90 bp TTCTGTGTCTCCTGGTTTACCTGGCTTAGGATCTTCAAAGTCCCATaGATACATATTGATCAGGGCAGACATTGTGGGCTATTTTCCTTA +
Preference number: 1 (lower is better)
Translates to: FCVSWFTWLRIFKVP*IHIDQGRHCGLFSL
Trigger: TAAGGAAAATAGCCCACAATGTCTGCCCTGATCAATATGTATCCATGGGACTTTGAAGATCCTAAGCCAGGTAAACCAGGAGACACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR TCA 90 bp AAAAATAGTTATTTGTGCTGGGAGTGTCCTGGCCAAATAAGCAGTTaGTACTTGGGTGTTTACAGGGAGAAAAAGGGAAGTCTCGGTTCT +
Preference number: 1 (lower is better)
Translates to: KNSYLCWECPGQISS*YLGVYREKKGSLGS
Trigger: AGAACCGAGACTTCCCTTTTTCTCCCTGTAAACACCCAAGTATCAACTGCTTATTTGGCCAGGACACTCCCAGCACAAATAACTATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR CCA 90 bp GATCAGGGCAGACATTGTGGGCTATTTTCCTTAAACATGCTGAAATaGAAAGATTTTCCTAGTGTTACCAAGGGAAGGACTTTCTTGACC +
Preference number: 1 (lower is better)
Translates to: DQGRHCGLFSLNMLK*KDFPSVTKGRTFLT
Trigger: GGTCAAGAAAGTCCTTCCCTTGGTAACACTAGGAAAATCTTTCCATTTCAGCATGTTTAAGGAAAATAGCCCACAATGTCTGCCCTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR GCA 90 bp CCATGCCAAGAGATCAGTGTGGAATGCAATAAGCTTTATAAAATATaGTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTAC +
Preference number: 1 (lower is better)
Translates to: PCQEISVECNKLYKI*FGGCFALQMDLTCY
Trigger: GTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATATTTTATAAAGCTTATTGCATTCCACACTGATCTCTTGGCATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR CCA 90 bp ATAAGCTTTATAAAATATGCTTTGGGGGCTGCTTTGCTTTGCAAATaGACCTTACATGTTACATGTCGAGCAAGTGGCTCACAATGGCAA +
Preference number: 1 (lower is better)
Translates to: ISFIKYALGAALLCK*TLHVTCRASGSQWQ
Trigger: TTGCCATTGTGAGCCACTTGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATATTTTATAAAGCTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR CCA 90 bp ATACCTTTTCTTTCTTTGCAAATCTGGTACGTCTTCTGTGTCTCCTaGTTTACCTGGCTTAGGATCTTCAAAGTCCCATGGATACATATT +
Preference number: 1 (lower is better)
Translates to: IPFLSLQIWYVFCVS*FTWLRIFKVPWIHI
Trigger: AATATGTATCCATGGGACTTTGAAGATCCTAAGCCAGGTAAACCAGGAGACACAGAAGACGTACCAGATTTGCAAAGAAAGAAAAGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR TCA 90 bp CTACCCATGCCTTTGACTTTACCTCACCATCTGTCATGTTTTCCTTaGTTGACAAATCCTCCTTGGGAATATTTGATTCTTATATCTTCT +
Preference number: 1 (lower is better)
Translates to: LPMPLTLPHHLSCFP*LTNPPWEYLILISS
Trigger: AGAAGATATAAGAATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGAGGTAAAGTCAAAGGCATGGGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR TCA 90 bp AATTCTCAAGAAAGGAATCAAGTGCTAACAGATTTCAGACATAAATaGAACAAATATGTGGGTCTAGGAACTTCCAACCCAGTTCACAAA +
Preference number: 1 (lower is better)
Translates to: NSQERNQVLTDFRHK*NKYVGLGTSNPVHK
Trigger: TTTGTGAACTGGGTTGGAAGTTCCTAGACCCACATATTTGTTTCATTTATGTCTGAAATCTGTTAGCACTTGATTCCTTTCTTGAGAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR TCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAAACCTCTTTGGGATTTaGGCCCAGCAAGTTCTACCT +
Preference number: 2 (lower is better)
Translates to: ALGAALLCKWTLHVTCRANLFGI*AQQVLP
Trigger: AGGTAGAACTTGCTGGGCTCAAATCCCAAAGAGGTT...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR TCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTAACCTCTTTGGGATTTaGGCCCAGCAAGTTCTACCT +
Preference number: 2 (lower is better)
Translates to: LESHCMIMSVGLSRQLRINLFGI*AQQVLP
Trigger: AGGTAGAACTTGCTGGGCTCAAATCCCAAAGAGGTT...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR TCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGCTGACTTCTCCATTATaGCGTTGTTGCTCTTGCCCC +
Preference number: 2 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSLTSPL*RCCSCP
Trigger: GGGGCAAGAGCAACAACGTCATAATGGAGAAGTCAG...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR TCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCACAGTGCTTGGGAGAATaGAGATTCCATACCACCTTA +
Preference number: 2 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAQCLGE*RFHTTL
Trigger: TAAGGTGGTATGGAATCTTCATTCTCCCAAGCACTG...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR CCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTTACATGTCGAGCAAGTaGCTCACAATGGCAATTTGC +
Preference number: 2 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIYMSSK*LTMAIC
Trigger: GCAAATTGCCATTGTGAGCCACTTGCTCGACATGTA...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR CCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGGTCTTCTGTGTCTCCTaGTTTACCTGGCTTAGGATC +
Preference number: 2 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSVFCVS*FTWLRI
Trigger: GATCCTAAGCCAGGTAAACCAGGAGACACAGAAGAC...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR CCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCACTTTCTTTGCAAATCTaGTACGTCTTCTGTGTCTCC +
Preference number: 2 (lower is better)
Translates to: ALGAALLCKWTLHVTCRALSLQI*YVFCVS
Trigger: GGAGACACAGAAGACGTACCAGATTTGCAAAGAAAG...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR TCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCATTCTTGACCAAAGTCTaGCTTCTCCATTATGACGTT +
Preference number: 2 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAFLTKV*LLHYDV
Trigger: AACGTCATAATGGAGAAGTCAGACTTTGGTCAAGAA...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR CCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCATCAGGGCAGACATTGTaGGCTATTTTCCTTAAACAT +
Preference number: 2 (lower is better)
Translates to: ALGAALLCKWTLHVTCRASGQTL*AIFLKH
Trigger: ATGTTTAAGGAAAATAGCCCACAATGTCTGCCCTGA...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR CCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAATCTTCAAAGTCCCATaGATACATATTGATCAGGGC +
Preference number: 2 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAIFKVP*IHIDQG
Trigger: GCCCTGATCAATATGTATCCATGGGACTTTGAAGAT...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR CCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGGTCTCCTGGTTTACCTaGCTTAGGATCTTCAAAGTC +
Preference number: 2 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSVSWFT*LRIFKV
Trigger: GACTTTGAAGATCCTAAGCCAGGTAAACCAGGAGAC...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR CCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGGCAAGTGGCTCACAATaGCAATTTGCAGGACTTAGA +
Preference number: 2 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSASGSQ*QFAGLR
Trigger: TCTAAGTCCTGCAAATTGCCATTGTGAGCCACTTGC...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR CCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGCTTTCTTTGCAAATCTaGTACGTCTTCTGTGTCTCC +
Preference number: 2 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSLSLQI*YVFCVS
Trigger: GGAGACACAGAAGACGTACCAGATTTGCAAAGAAAG...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR CCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTACATTTTCCAGTGCTTaGGAGAATGAAGATTCCATA +
Preference number: 2 (lower is better)
Translates to: LESHCMIMSVGLSRQLRITFSSA*ENEDSI
Trigger: TATGGAATCTTCATTCTCCCAAGCACTGGAAAATGT...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR TCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGCATGTTTTCCTTGATTaGCAAATCCTCCTTGGGAAT +
Preference number: 2 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSHVFLD*QILLGN
Trigger: ATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATG...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR TCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGTTCTTGACCAAAGTCTaGCTTCTCCATTATGACGTT +
Preference number: 2 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSFLTKV*LLHYDV
Trigger: AACGTCATAATGGAGAAGTCAGACTTTGGTCAAGAA...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR CCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGTCAGGGCAGACATTGTaGGCTATTTTCCTTAAACAT +
Preference number: 2 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSSGQTL*AIFLKH
Trigger: ATGTTTAAGGAAAATAGCCCACAATGTCTGCCCTGA...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR TCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGGTGCAATAACAATTaGATAGCTGCAGATTGCATA +
Preference number: 2 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSRCNNN*IAADCI
Trigger: TATGCAATCTGCAGCTATTCAATTGTTATTGCACCT...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR TCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTAAGTCAGCAAATGGGTaGGGAAGATTTGCGCACAGC +
Preference number: 2 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVKSANG*GRFAHS
Trigger: GCTGTGCGCAAATCTTCCTCACCCATTTGCTGACTT...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR CAA 90 bp GCCAAGAGATCAGTGTGGAATGCAATAAGCTTTATAAAATATGCTTaGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGT +
Preference number: 2 (lower is better)
Translates to: AKRSVWNAISFIKYA*GAALLCKWTLHVTC
Trigger: ACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATATTTTATAAAGCTTATTGCATTCCACACTGATCTCTTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR TCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTTTGCGCACAGCTTTGTaGAACAGTGAAGTGCTTGCT +
Preference number: 2 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVLRTAL*NSEVLA
Trigger: AGCAAGCACTTCACTGTTTCACAAAGCTGTGCGCAA...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR TCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTGGCCAAATAAGCAGTTaGTACTTGGGTGTTTACAGG +
Preference number: 2 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVGQISS*YLGVYR
Trigger: CCTGTAAACACCCAAGTATCAACTGCTTATTTGGCC...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR TCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTAGCTTTGTGAAACAGTaGAGTGCTTGCTTACTCCTG +
Preference number: 2 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVSFVKQ*SACLLL
Trigger: CAGGAGTAAGCAAGCACTTCACTGTTTCACAAAGCT...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR TCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTTCTAGGCACTCTCACTaGTTTATGCTGGTGGAGAAT +
Preference number: 2 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVSRHSH*FMLVEN
Trigger: ATTCTCCACCAGCATAAATCAGTGAGAGTGCCTAGA...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR GCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTGGGGCTGCTTTGCTTTaGAAATGGACCTTACATGTT +
Preference number: 2 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVGAALL*KWTLHV
Trigger: AACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCC...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR GCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTATATGCTTTGGGGGCTaGTTTGCTTTGCAAATGGAC +
Preference number: 2 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVICFGG*FALQMD
Trigger: GTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR GCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTTGGGTGAGGAAGATTTaGGCACAGCTTTGTGAAACA +
Preference number: 2 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVWVRKI*AQLCET
Trigger: TGTTTCACAAAGCTGTGCGCAAATCTTCCTCACCCA...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR CAA 90 bp TCTACCCATGCCTTTGACTTTACCTCACCATCTGTCATGTTTTCCTaGATTGACAAATCCTCCTTGGGAATATTTGATTCTTATATCTTC +
Preference number: 2 (lower is better)
Translates to: STHAFDFTSPSVMFS*IDKSSLGIFDSYIF
Trigger: GAAGATATAAGAATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGAGGTAAAGTCAAAGGCATGGGTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR TCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTCATGTTTTCCTTGATTaGCAAATCCTCCTTGGGAAT +
Preference number: 2 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVHVFLD*QILLGN
Trigger: ATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATG...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR CCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTATCTTCAAAGTCCCATaGATACATATTGATCAGGGC +
Preference number: 2 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVIFKVP*IHIDQG
Trigger: GCCCTGATCAATATGTATCCATGGGACTTTGAAGAT...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR TCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTAAAGTCACTGATGCTTaGCTGCATAATTCTCAAGAA +
Preference number: 2 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVKVTDA*LHNSQE
Trigger: TTCTTGAGAATTATGCAGTCAAGCATCAGTGACTTT...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR CCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTGCCAAGAGATCAGTGTaGAATGCAATAAGCTTTATA +
Preference number: 2 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVAKRSV*NAISFI
Trigger: TATAAAGCTTATTGCATTCCACACTGATCTCTTGGC...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR GCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTACTCTCACTGATTTATaGTGGTGGAGAATAATCTAT +
Preference number: 2 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVTLTDL*WWRIIY
Trigger: ATAGATTATTCTCCACCAGCATAAATCAGTGAGAGT...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR CAA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTGGGGGCTGCTTTGCTTaGCAAATGGACCTTACATGT +
Preference number: 3 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIGGCFA*QMDLTC
Trigger: ACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCC...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR CAA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTTCCCATGGATACATATaGATCAGGGCAGACATTGTG +
Preference number: 3 (lower is better)
Translates to: LESHCMIMSVGLSRQLRISHGYI*IRADIV
Trigger: CACAATGTCTGCCCTGATCAATATGTATCCATGGGA...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR CAA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTGGTTATAAAACCTCTTaGGGATTTGAGCCCAGCAAG +
Preference number: 3 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIGYKTS*GFEPSK
Trigger: CTTGCTGGGCTCAAATCCCAAAGAGGTTTTATAACC...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR TCA 72 bp AGTGTTACCAAGGGAAGGACTTTCTTGACCAAAGTCTaGCTTCTCCATTATGACGTTGTTGCTCTTGCCCCC +
Preference number: 3 (lower is better)
Translates to: SVTKGRTFLTKV*LLHYDVVALAP
Trigger: GGGGGCAAGAGCAACAACGTCATAATGGAGAAGTCAGACTTTGGTCAAGAAAGTCCTTCCCTTGGTAACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR CAA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGCTTCTACCCATGCCTTaGACTTTACCTCACCATCTG +
Preference number: 3 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSLLPMP*TLPHHL
Trigger: CAGATGGTGAGGTAAAGTCAAAGGCATGGGTAGAAG...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR CAA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAAACCTCTTTGGGATTaGAGCCCAGCAAGTTCTACC +
Preference number: 3 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSKPLWD*SPASST
Trigger: GGTAGAACTTGCTGGGCTCAAATCCCAAAGAGGTTT...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR CAA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTGCTCACAATGGCAATTaGCAGGACTTAGACATTTTC +
Preference number: 3 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIAHNGN*QDLDIF
Trigger: GAAAATGTCTAAGTCCTGCAAATTGCCATTGTGAGC...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR CCA 72 bp TCCTGGTTTACCTGGCTTAGGATCTTCAAAGTCCCATaGATACATATTGATCAGGGCAGACATTGTGGGCTA +
Preference number: 3 (lower is better)
Translates to: SWFTWLRIFKVP*IHIDQGRHCGL
Trigger: TAGCCCACAATGTCTGCCCTGATCAATATGTATCCATGGGACTTTGAAGATCCTAAGCCAGGTAAACCAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR CCA 72 bp CTTTCTTTGCAAATCTGGTACGTCTTCTGTGTCTCCTaGTTTACCTGGCTTAGGATCTTCAAAGTCCCATGG +
Preference number: 3 (lower is better)
Translates to: LSLQIWYVFCVS*FTWLRIFKVPW
Trigger: CCATGGGACTTTGAAGATCCTAAGCCAGGTAAACCAGGAGACACAGAAGACGTACCAGATTTGCAAAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR CAA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTTCTGTCATGTTTTCCTaGATTGACAAATCCTCCTTG +
Preference number: 3 (lower is better)
Translates to: LESHCMIMSVGLSRQLRISVMFS*IDKSSL
Trigger: CAAGGAGGATTTGTCAATCAAGGAAAACATGACAGA...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR CAA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGTCCCATGGATACATATaGATCAGGGCAGACATTGTG +
Preference number: 3 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSSHGYI*IRADIV
Trigger: CACAATGTCTGCCCTGATCAATATGTATCCATGGGA...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR TCA 72 bp TATTTGTGCTGGGAGTGTCCTGGCCAAATAAGCAGTTaGTACTTGGGTGTTTACAGGGAGAAAAAGGGAAGT +
Preference number: 3 (lower is better)
Translates to: YLCWECPGQISS*YLGVYREKKGS
Trigger: ACTTCCCTTTTTCTCCCTGTAAACACCCAAGTATCAACTGCTTATTTGGCCAGGACACTCCCAGCACAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR CAA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAATACCTTTTCTTTCTTaGCAAATCTGGTACGTCTTC +
Preference number: 3 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAIPFLS*QIWYVF
Trigger: GAAGACGTACCAGATTTGCAAAGAAAGAAAAGGTAT...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR GCA 72 bp GTAATGCATAAAGTCAGCAAATGGGTGAGGAAGATTTaGGCACAGCTTTGTGAAACAGTGAAGTGCTTGCTT +
Preference number: 3 (lower is better)
Translates to: VMHKVSKWVRKI*AQLCETVKCLL
Trigger: AAGCAAGCACTTCACTGTTTCACAAAGCTGTGCGCAAATCTTCCTCACCCATTTGCTGACTTTATGCATTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR CCA 72 bp CAAATCTGGTACGTCTTCTGTGTCTCCTGGTTTACCTaGCTTAGGATCTTCAAAGTCCCATGGATACATATT +
Preference number: 3 (lower is better)
Translates to: QIWYVFCVSWFT*LRIFKVPWIHI
Trigger: AATATGTATCCATGGGACTTTGAAGATCCTAAGCCAGGTAAACCAGGAGACACAGAAGACGTACCAGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR CCA 72 bp ACCTTACATGTTACATGTCGAGCAAGTGGCTCACAATaGCAATTTGCAGGACTTAGACATTTTCCAGTGCTT +
Preference number: 3 (lower is better)
Translates to: TLHVTCRASGSQ*QFAGLRHFPVL
Trigger: AAGCACTGGAAAATGTCTAAGTCCTGCAAATTGCCATTGTGAGCCACTTGCTCGACATGTAACATGTAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR CAA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGCCTCCTTGGGAATATTaGATTCTTATATCTTCTGTC +
Preference number: 3 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSPPWEY*ILISSV
Trigger: GACAGAAGATATAAGAATCAAATATTCCCAAGGAGG...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR CAA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGATACCTTTTCTTTCTTaGCAAATCTGGTACGTCTTC +
Preference number: 3 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSIPFLS*QIWYVF
Trigger: GAAGACGTACCAGATTTGCAAAGAAAGAAAAGGTAT...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR CAA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGTTGAATAGCTGCAGATaGCATAAATGTGTTGTGTCA +
Preference number: 3 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSLNSCR*HKCVVS
Trigger: TGACACAACACATTTATGCAATCTGCAGCTATTCAA...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR TCA 72 bp CCTTTGACTTTACCTCACCATCTGTCATGTTTTCCTTaGTTGACAAATCCTCCTTGGGAATATTTGATTCTT +
Preference number: 3 (lower is better)
Translates to: PLTLPHHLSCFP*LTNPPWEYLIL
Trigger: AAGAATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGAGGTAAAGTCAAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR TCA 72 bp GAAAGGAATCAAGTGCTAACAGATTTCAGACATAAATaGAACAAATATGTGGGTCTAGGAACTTCCAACCCA +
Preference number: 3 (lower is better)
Translates to: ERNQVLTDFRHK*NKYVGLGTSNP
Trigger: TGGGTTGGAAGTTCCTAGACCCACATATTTGTTTCATTTATGTCTGAAATCTGTTAGCACTTGATTCCTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR-3UTR CAA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTTACAATCTGGAATGCTaGAATATGAGACACAACGAT +
Preference number: 3 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVYNLEC*NMRHND
Trigger: ATCGTTGTGTCTCATATTCAAGCATTCCAGATTGTA...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR TCA 72 bp ATAGATAGCAGGTATTCTGTAAGGTGCAATAACAATTaGATAGCTGCAGATTGCATAAATGTGTTGTGTCAC +
Preference number: 3 (lower is better)
Translates to: IDSRYSVRCNNN*IAADCINVLCH
Trigger: GTGACACAACACATTTATGCAATCTGCAGCTATTCAATTGTTATTGCACCTTACAGAATACCTGCTATCTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR GCA 72 bp CAAATACAAGAGAACTGTCGAGTTTCAAATCCATATTaGCACCAAAGTTTACAATGGGTTGAGTTATACTTC +
Preference number: 3 (lower is better)
Translates to: QIQENCRVSNPY*HQSLQWVELYF
Trigger: GAAGTATAACTCAACCCATTGTAAACTTTGGTGGCAATATGGATTTGAAACTCGACAGTTCTCTTGTATTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCACCCGGCTGCTGGGCGTaGGGCTTCCCCTTCGGGGTC +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAPGCWA*GFPFGV
Trigger: GACCCCGAAGGGGAAGCCGCACGCCCAGCAGCCGGG...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCACGCCGAGCCCGTCCTTaGGCCGCCAGCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRARRARP*AASCGP
Trigger: TGGGCCACAGCTGGCGGCGCAAGGACGGGCTCGGCG...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTCGCCGAGCCCGTCCTTaGGCCGCCAGCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIRRARP*AASCGP
Trigger: TGGGCCACAGCTGGCGGCGCAAGGACGGGCTCGGCG...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAGTCTCTCGGCCCGGCTaGCGCCACCGCCGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAVSRPG*RHRRSH
Trigger: ATGAGAGCGGCGGTGGCGGCAGCCGGGCCGAGAGAC...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAGCCGAGCGGGTTACATaGCCTCGCGCTCCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAAERVT*PRAPSG
Trigger: GCCGCTGGGAGCGCGAGGCCATGTAACCCGCTCGGC...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTAGGAGGGGTGCGCGCTaGCCAGGGCTGGCCACTTCC +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIRRGAR*PGLATS
Trigger: GGAAGTGGCCAGCCCTGGCCAGCGCGCACCCCTCCT...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAGGCGCGTTCAGAAGCTaGTGCTGCTGCTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAGAFRS*CCCCRR
Trigger: GCGGCGGCAGCAGCAGCAGCAGCTTCTGAACGCGCC...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGGAGGCTCGACCCGGCTaGTGGGCGTGCGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSEARPG*WACGFP
Trigger: GGGGAAGCCGCACGCCCAGCAGCCGGGTCGAGCCTC...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTTGGCCGCCCGGGAGATaGTGGGCTCGCCCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIWPPGR*WARPPE
Trigger: TTCTGGAGGGCGAGCCCAGCATCTCCCGGGCGGCCA...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAAGTGGGGCCTCCACTTaGGCCGGAGGCCGTGGAACC +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRASGAST*AGGRGT
Trigger: GGTTCCACGGCCTCCGGCGCAAGTGGAGGCCCCACT...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAGTGGCGTTGGCCAGGTaGGGTGCGGAGGAGGACAGG +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAVALAR*GAEEDR
Trigger: CCTGTCCTCCTCCGCACCCCACCTGGCCAACGCCAC...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGGTGTCCAGCGCCCGGTaGAAGGAGGGGTGCGCGCTG +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSVSSAR*KEGCAL
Trigger: CAGCGCGCACCCCTCCTTGCACCGGGCGCTGGACAC...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAGACCTGTGGGGCCGGTaGGGACAGCGAATCGGTGCT +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRADLWGR*GQRIGA
Trigger: AGCACCGATTCGCTGTCCGCACCGGCCCCACAGGTC...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAGGTCTTGGAGCAGGATaGGGCTCTCCTCGCGCGTGG +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAGLGAG*GSPRAW
Trigger: CCACGCGCGAGGAGAGCCGCATCCTGCTCCAAGACC...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTCTTGGGGGTCGCGGCTaGCGCCAACAGCTCCCAATC +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRILGGRG*RQQLPI
Trigger: GATTGGGAGCTGTTGGCGCCAGCCGCGACCCCCAAG...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGGCTCGACCCGGCTGCTaGGCGTGCGGCTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSARPGC*ACGFPF
Trigger: GAAGGGGAAGCCGCACGCCCAGCAGCCGGGTCGAGC...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAAGATGGTGCCATCGGTaGAGCGGCTCCAGGGAGCCG +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRARWCHR*SGSREP
Trigger: CGGCTCCCTGGAGCCGCTCCACCGATGGCACCATCT...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTAGCGGCCGGAGCAGTTaGCTCGCTTCAGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRISGRSS*LASAGG
Trigger: CCCACCAGCTGAAGCGAGCCAACTGCTCCGGCCGCT...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGCCGCCCGGGAGATGCTaGGCTCGCCCTCCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSPPGRC*ARPPEG
Trigger: GCCTTCTGGAGGGCGAGCCCAGCATCTCCCGGGCGG...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTCTGGAGGAAGACCTGTaGGGCCGGTGCGGACAGCGA +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRILEEDL*GRCGQR
Trigger: TCGCTGTCCGCACCGGCCCCACAGGTCTTCCTCCAG...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCACTGGAGGAAGACCTGTaGGGCCGGTGCGGACAGCGA +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRALEEDL*GRCGQR
Trigger: TCGCTGTCCGCACCGGCCCCACAGGTCTTCCTCCAG...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAGGCTCTCCTCGCGCGTaGCCTGGAGGAAGACCTGTG +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAGSPRA*PGGRPV
Trigger: CACAGGTCTTCCTCCAGGCCACGCGCGAGGAGAGCC...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTTCTCCAGAGTGGCGTTaGCCAGGTGGGGTGCGGAGG +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRISPEWR*PGGVRR
Trigger: CCTCCGCACCCCACCTGGCCAACGCCACTCTGGAGA...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGCCCGGGGCCCCTGATTaGGGCCGCGGCGGTGTAAGT +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSPGAPD*GRGGVS
Trigger: ACTTACACCGCCGCGGCCCCAATCAGGGGCCCCGGG...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGCCCGCCTCCCGGCACTaGCTCCTCCTCGACCGCTTC +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSPASRH*LLLDRF
Trigger: GAAGCGGTCGAGGAGGAGCCAGTGCCGGGAGGCGGG...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650135.1
CDS-3UTR TCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTCACCGCCGCTCTCATTaGGGCGCGTTCAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIHRRSH*GAFRSC
Trigger: GCAGCTTCTGAACGCGCCTCAATGAGAGCGGCGGTG...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTTCTGCGCCAAGATGGTaGCATCGGTGGAGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRISAPRW*HRWSGS
Trigger: GGAGCCGCTCCACCGATGGCACCATCTTGGCGCAGA...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGTGGGGCCTCCACTTaGGCCGGAGGCCGTGGAACC +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSSGAST*AGGRGT
Trigger: GGTTCCACGGCCTCCGGCGCAAGTGGAGGCCCCACT...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTGCGGGGCTCATGGAATaGCGATGGGACTGTCCGCAC +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIAGLME*RWDCPH
Trigger: GTGCGGACAGTCCCATCGGCATTCCATGAGCCCCGC...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTCAGTGCCTTTGGCTGTaGCATGGTCGGCGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIQCLWL*HGRRPP
Trigger: AGGAGGGCGCCGACCATGGCACAGCCAAAGGCACTG...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAACGCACCTCGCAGCCTaGAGCCGAGCGGGTTACATG +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRATHLAA*SRAGYM
Trigger: CATGTAACCCGCTCGGCTCCAGGCTGCGAGGTGCGT...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376351.4
CDS-3UTR CCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGGTGGCGTTGGCCAGGTaGGGTGCGGAGGAGGACAGG +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSVALAR*GAEEDR
Trigger: CCTGTCCTCCTCCGCACCCCACCTGGCCAACGCCAC...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTTTGCGCCGGAGGCCGTaGAACCACTCGGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRILRRRP*NHSVSR
Trigger: TCTGGAGACCGAGTGGTTCCACGGCCTCCGGCGCAA...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTCCTTTGGCTGTGCCATaGTCGGCGCCCTCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIPLAVP*SAPSLS
Trigger: GGACAAGGAGGGCGCCGACCATGGCACAGCCAAAGG...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCATCCCAGCTCGCAGCCTaGAGCCGAGCGGGTTACATG +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRASQLAA*SRAGYM
Trigger: CATGTAACCCGCTCGGCTCCAGGCTGCGAGCTGGGA...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650135.1
CDS-3UTR TCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTAAGGCGGAGACCACTTaGAGTGGCTCTTGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIKAETT*SGSCPR
Trigger: GCGGGGACAAGAGCCACTTCAAGTGGTCTCCGCCTT...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAAAGGCGGAGACCACTTaGAGTGGCTCTTGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAKAETT*SGSCPR
Trigger: GCGGGGACAAGAGCCACTTCAAGTGGTCTCCGCCTT...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGGACCTGTGGGGCCGGTaGGGACAGCGAATCGGTGCT +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSDLWGR*GQRIGA
Trigger: AGCACCGATTCGCTGTCCGCACCGGCCCCACAGGTC...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTAGGGGCAGCCCTCCCTaGAAGGTAGGCAGACATAGG +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIRGSPP*KVGRHR
Trigger: CCTATGTCTGCCTACCTTGCAGGGAGGGCTGCCCCT...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTAAGAGGCCACGTCCATaGGCACCTCCTCGGCGAGTT +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIKRPRP*APPRRV
Trigger: AACTCGCCGAGGAGGTGCCCATGGACGTGGCCTCTT...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAAAGAGGCCACGTCCATaGGCACCTCCTCGGCGAGTT +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAKRPRP*APPRRV
Trigger: AACTCGCCGAGGAGGTGCCCATGGACGTGGCCTCTT...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTCTCCACACCAGCGCCTaGTACCAATCCAGGTCGTCC +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRILHTSA*YQSRSS
Trigger: GGACGACCTGGATTGGTACCAGGCGCTGGTGTGGAG...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTGAGGAGGACAGGTCTTaGAGCAGGATGCGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIEEDRS*SRMRLS
Trigger: GGAGAGCCGCATCCTGCTCCAAGACCTGTCCTCCTC...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGTCTCCAGAGTGGCGTTaGCCAGGTGGGGTGCGGAGG +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSSPEWR*PGGVRR
Trigger: CCTCCGCACCCCACCTGGCCAACGCCACTCTGGAGA...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTACGGCACCGACTCCGTaGACTCAGCCTCGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRITAPTP*TQPRCL
Trigger: AAGACAGCGAGGCTGAGTCCACGGAGTCGGTGCCGT...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAGCCCAGCACACACATTaGCTGCACGAGGCTGACCTC +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAAQHTH*LHEADL
Trigger: GAGGTCAGCCTCGTGCAGCCAATGTGTGTGCTGGGC...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGCACCGCCGCTCTCATTaGGGCGCGTTCAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSHRRSH*GAFRSC
Trigger: GCAGCTTCTGAACGCGCCTCAATGAGAGCGGCGGTG...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTCAATCCAGGTCGTCCTaGAAGTTCTGCTCCCGCGAC +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIQSRSS*KFCSRD
Trigger: GTCGCGGGAGCAGAACTTGCAGGACGACCTGGATTG...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGGTTGGCCAGGTGGGGTaGGGAGGAGGACAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSVGQVG*GGGQVL
Trigger: CAAGACCTGTCCTCCTCCGCACCCCACCTGGCCAAC...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGCAGTGCCTTTGGCTGTaGCATGGTCGGCGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSQCLWL*HGRRPP
Trigger: AGGAGGGCGCCGACCATGGCACAGCCAAAGGCACTG...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAGTAAGGGGTAAGCCATaGCTCCCATCTGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAVRGKP*LPSASQ
Trigger: CTGGGAGGCAGATGGGAGCCATGGCTTACCCCTTAC...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376351.4
CDS-3UTR CCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGTTGCGCCGGAGGCCGTaGAACCACTCGGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSLRRRP*NHSVSR
Trigger: TCTGGAGACCGAGTGGTTCCACGGCCTCCGGCGCAA...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCATCTGAGCTGAGGTTGTaGGCGCTTGCTGACTTGCAC +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRASELRL*ALADLH
Trigger: GTGCAAGTCAGCAAGCGCTCACAACCTCAGCTCAGA...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCATTGGCTGCACGAGGCTaGCCTCCGTTCTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRALAARG*PPFSSF
Trigger: AAAAGAGGAGAACGGAGGTCAGCCTCGTGCAGCCAA...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTCCCGGCTGCTGGGCGTaGGGCTTCCCCTTCGGGGTC +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVPGCWA*GFPFGV
Trigger: GACCCCGAAGGGGAAGCCGCACGCCCAGCAGCCGGG...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTGAGGCTCGACCCGGCTaGTGGGCGTGCGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVEARPG*WACGFP
Trigger: GGGGAAGCCGCACGCCCAGCAGCCGGGTCGAGCCTC...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCATCCTCTTTAGAGCACTaGCGGCTGACTGTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRASSLEH*RLTVSG
Trigger: CCCAGAGACAGTCAGCCGGCAGTGCTCTAAAGAGGA...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTAGCACACACATTGGCTaGACGAGGCTGACCTCCGTT +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRISTHIG*TRLTSV
Trigger: AACGGAGGTCAGCCTCGTGCAGCCAATGTGTGTGCT...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTGGCAGTTCTTCGCTCTaGCCAGCACACACATTGGCT +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIGSSSL*PAHTLA
Trigger: AGCCAATGTGTGTGCTGGGCAGAGCGAAGAACTGCC...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATCGCGCTCCCAGCGGCTaGAGTCAGCCCGAGTCCGTC +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDRAPSG*SQPESV
Trigger: GACGGACTCGGGCTGACTCCAGCCGCTGGGAGCGCG...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTCACCTGTGGCAGCGCTaGCCGTGCCCGCTGCGCGAG +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVHLWQR*PCPLRE
Trigger: CTCGCGCAGCGGGCACGGCCAGCGCTGCCACAGGTG...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376351.4
CDS-3UTR CCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATGAATCCGGCCGTCCTTaGGGGTCGCGGCTGGCGCCA +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDESGRP*GSRLAP
Trigger: TGGCGCCAGCCGCGACCCCCAAGGACGGCCGGATTC...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATGCTCGACCCGGCTGCTaGGCGTGCGGCTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDARPGC*ACGFPF
Trigger: GAAGGGGAAGCCGCACGCCCAGCAGCCGGGTCGAGC...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGGTTTCTGCGCCAAGATaGTGCCATCGGTGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSVSAPR*CHRWSG
Trigger: GCCGCTCCACCGATGGCACCATCTTGGCGCAGAAAC...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATAGGAGGGGTGCGCGCTaGCCAGGGCTGGCCACTTCC +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDRRGAR*PGLATS
Trigger: GGAAGTGGCCAGCCCTGGCCAGCGCGCACCCCTCCT...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGCTCCACACCAGCGCCTaGTACCAATCCAGGTCGTCC +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSLHTSA*YQSRSS
Trigger: GGACGACCTGGATTGGTACCAGGCGCTGGTGTGGAG...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGGAGGAGGACAGGTCTTaGAGCAGGATGCGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSEEDRS*SRMRLS
Trigger: GGAGAGCCGCATCCTGCTCCAAGACCTGTCCTCCTC...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATCCGCGGCGGTGTAAGTaGGGCCTCCACTTGCGCCGG +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDPRRCK*GLHLRR
Trigger: CCGGCGCAAGTGGAGGCCCCACTTACACCGCCGCGG...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGCTGCCAGCATCCTCATaGCCCGTCCGCCAGTCATAT +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSLPASS*PVRQSY
Trigger: ATATGACTGGCGGACGGGTCATGAGGATGCTGGCAG...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGGTTGTGAGCGCTTGCTaGCTTGCACACCAACGGCAC +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSVVSAC*LAHQRH
Trigger: GTGCCGTTGGTGTGCAAGTCAGCAAGCGCTCACAAC...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTCCGACCCCACCAACCTaGGTAATGCATAAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIPTPPT*VMHKVS
Trigger: GCTGACTTTATGCATTACTCAGGTTGGTGGGGTCGG...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCACCGACCCCACCAACCTaGGTAATGCATAAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAPTPPT*VMHKVS
Trigger: GCTGACTTTATGCATTACTCAGGTTGGTGGGGTCGG...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGTCCTCGGCGAGTTTCTaGGCCAAGATGGTGCCATCG +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSSSASF*AKMVPS
Trigger: CGATGGCACCATCTTGGCGCAGAAACTCGCCGAGGA...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTGTGTCCAGCGCCCGGTaGAAGGAGGGGTGCGCGCTG +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVVSSAR*KEGCAL
Trigger: CAGCGCGCACCCCTCCTTGCACCGGGCGCTGGACAC...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGCAATCCAGGTCGTCCTaGAAGTTCTGCTCCCGCGAC +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSQSRSS*KFCSRD
Trigger: GTCGCGGGAGCAGAACTTGCAGGACGACCTGGATTG...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCACAGGATAAGGCCCGATaGCCGGATGCTCTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAQDKAR*PDALCF
Trigger: AAAGCAAAGAGCATCCGGGCATCGGGCCTTATCCTG...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGGAGCGCTTGCTGACTTaGACACCAACGGCACCGACT +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSERLLT*TPTAPT
Trigger: AGTCGGTGCCGTTGGTGTGCAAGTCAGCAAGCGCTC...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAGCGTTCTTCCACACCTaGTGTTTGGGTTTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAAFFHT*CLGFPS
Trigger: GCTGGGAAAACCCAAACAGCAGGTGTGGAAGAACGC...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTCCTTCATCTGGGTGGTaGCTGGGTTCAGGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIPSSGW*LGSGQN
Trigger: ATTCTGACCTGAACCCAGGCACCACCCAGATGAAGG...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTTCCGTTCTCCTCTTTTaGCCTCTCTGGGAGAACTGG +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRISVLLF*PLWENW
Trigger: CCAGTTCTCCCAGAGAGGGCAAAAGAGGAGAACGGA...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTCGCGCTCCCAGCGGCTaGAGTCAGCCCGAGTCCGTC +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVRAPSG*SQPESV
Trigger: GACGGACTCGGGCTGACTCCAGCCGCTGGGAGCGCG...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTGCGCGAGGGGCCGGCTaGGGATTACGCACCTCGCAG +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVARGAG*GLRTSQ
Trigger: CTGCGAGGTGCGTAATCCCCAGCCGGCCCCTCGCGC...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376351.4
CDS-3UTR CCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTCCGCCCGGGAGATGCTaGGCTCGCCCTCCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVPPGRC*ARPPEG
Trigger: GCCTTCTGGAGGGCGAGCCCAGCATCTCCCGGGCGG...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCACTCATGGAATGCCGATaGGACTGTCCGCACTGCATA +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRALMECR*DCPHCI
Trigger: TATGCAGTGCGGACAGTCCCATCGGCATTCCATGAG...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTCTCATGGAATGCCGATaGGACTGTCCGCACTGCATA +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRILMECR*DCPHCI
Trigger: TATGCAGTGCGGACAGTCCCATCGGCATTCCATGAG...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTGAGCACCGCTTTTTCTaGAGGTGGGGGTTGTTTGTG +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIEHRFF*RWGLFV
Trigger: CACAAACAACCCCCACCTCCAGAAAAAGCGGTGCTC...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTCTGTGGGTAGGCTACTaGACTCTTCCGTTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRILWVGY*TLPFGL
Trigger: GAGACCAAACGGAAGAGTCCAGTAGCCTACCCACAG...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTAAGTTGTCCTTCATCTaGGTGGTGCCTGGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIKLSFI*VVPGFR
Trigger: CCTGAACCCAGGCACCACCCAGATGAAGGACAACTT...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAGTGCTCACTCCAGGCTaGATTGATACTGCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAVLTPG*IDTAVQ
Trigger: CTGAACAGCAGTATCAATTCAGCCTGGAGTGAGCAC...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTGTGCTCACTCCAGGCTaGATTGATACTGCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIVLTPG*IDTAVQ
Trigger: CTGAACAGCAGTATCAATTCAGCCTGGAGTGAGCAC...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGTTGGCTGCACGAGGCTaGCCTCCGTTCTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSLAARG*PPFSSF
Trigger: AAAAGAGGAGAACGGAGGTCAGCCTCGTGCAGCCAA...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCACTGACTTCTCCATTATaGCGTTGTTGCTCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRALTSPL*RCCSCP
Trigger: GGGGCAAGAGCAACAACGTCATAATGGAGAAGTCAG...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTAAGTCAGCAAATGGGTaGGGAAGATTTGCGCACAGC +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIKSANG*GRFAHS
Trigger: GCTGTGCGCAAATCTTCCTCACCCATTTGCTGACTT...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAAAGTCAGCAAATGGGTaGGGAAGATTTGCGCACAGC +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAKSANG*GRFAHS
Trigger: GCTGTGCGCAAATCTTCCTCACCCATTTGCTGACTT...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTGGCGCGTTCAGAAGCTaGTGCTGCTGCTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVGAFRS*CCCCRR
Trigger: GCGGCGGCAGCAGCAGCAGCAGCTTCTGAACGCGCC...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTTGGCCGCCCGGGAGATaGTGGGCTCGCCCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVWPPGR*WARPPE
Trigger: TTCTGGAGGGCGAGCCCAGCATCTCCCGGGCGGCCA...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCATGCCCGGATGCTCTTTaGTTTGCGAAAGTGGTAGAC +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRACPDAL*FAKVVD
Trigger: GTCTACCACTTTCGCAAAGCAAAGAGCATCCGGGCA...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTGAGCTCATTGTGAACTaGAACAGCCATATAGCGGGG +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIELIVN*NSHIAG
Trigger: CCCCGCTATATGGCTGTTGCAGTTCACAATGAGCTC...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCACACACATTGGCTaGACGAGGCTGACCTCCGTT +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSSTHIG*TRLTSV
Trigger: AACGGAGGTCAGCCTCGTGCAGCCAATGTGTGTGCT...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGTCCCCCTTCTCCAGATaGCACCCAGTCCAAAGGACT +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSSPFSR*HPVQRT
Trigger: AGTCCTTTGGACTGGGTGCCATCTGGAGAAGGGGGA...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376351.4
CDS-3UTR CCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATAGCGGCCGGAGCAGTTaGCTCGCTTCAGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDSGRSS*LASAGG
Trigger: CCCACCAGCTGAAGCGAGCCAACTGCTCCGGCCGCT...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATGGCTCTCCTCGCGCGTaGCCTGGAGGAAGACCTGTG +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDGSPRA*PGGRPV
Trigger: CACAGGTCTTCCTCCAGGCCACGCGCGAGGAGAGCC...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCATTCCTGGACGAAGCATaGGCTGTCATCAGCACAGAA +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAFLDEA*AVISTE
Trigger: TTCTGTGCTGATGACAGCCCATGCTTCGTCCAGGAA...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAGTTGTCTCCTCCTCTTaGCTTTCTGTGGGTAGGCTA +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAVVSSS*LSVGRL
Trigger: TAGCCTACCCACAGAAAGCCAAGAGGAGGAGACAAC...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGCATCTGGGTGGTGCCTaGGTTCAGGTCAGAATTGGC +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSHLGGA*VQVRIG
Trigger: GCCAATTCTGACCTGAACCCAGGCACCACCCAGATG...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGTGTCCTTCATCTGGGTaGTGCCTGGGTTCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSCPSSG*CLGSGQ
Trigger: CTGACCTGAACCCAGGCACCACCCAGATGAAGGACA...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCATCTTCCAAAATGGACTaGCCTTGGCTCTCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRASSKMD*PWLSQR
Trigger: CCTTTGGGAGAGCCAAGGCCAGTCCATTTTGGAAGA...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCATCTCATCTTCCAAAATaGACTGGCCTTGGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRASHLPK*TGLGSP
Trigger: GGGAGAGCCAAGGCCAGTCCATTTTGGAAGATGAGA...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTCTCTTTTGCCCTCTCTaGGAGAACTGGAGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRILFCPL*ENWSLG
Trigger: TCCAAGACTCCAGTTCTCCCAGAGAGGGCAAAAGAG...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCATTGATGCTACAGCTTTaGGGGGCAGTTCTTCGCTCT +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRALMLQL*GAVLRS
Trigger: AGAGCGAAGAACTGCCCCCCAAAGCTGTAGCATCAA...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAATAATCCCAGATTTCTaGGGCTTTCTTGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAIIPDF*GFLGSS
Trigger: GGAGGAGCCAAGAAAGCCTCAGAAATCTGGGATTAT...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTCCCATGGATACATATTaGTCAGGGCAGACATTGTGG +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIPMDTY*SGQTLW
Trigger: CCACAATGTCTGCCCTGATCAATATGTATCCATGGG...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCATTGCGCACAGCTTTGTaGAACAGTGAAGTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRALRTAL*NSEVLA
Trigger: AGCAAGCACTTCACTGTTTCACAAAGCTGTGCGCAA...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTAGCCTGCACATGCATTaGGAAGGACAACCTAGCAAA +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRISLHMH*EGQPSK
Trigger: TTTGCTAGGTTGTCCTTCTCAATGCATGTGCAGGCT...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTGGTCTTGGAGCAGGATaGGGCTCTCCTCGCGCGTGG +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVGLGAG*GSPRAW
Trigger: CCACGCGCGAGGAGAGCCGCATCCTGCTCCAAGACC...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGCAGGATAAGGCCCGATaGCCGGATGCTCTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSQDKAR*PDALCF
Trigger: AAAGCAAAGAGCATCCGGGCATCGGGCCTTATCCTG...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCATACCAAGAGTATTACTaGCAGCATCCTCATGACCCG +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAYQEYY*QHPHDP
Trigger: CGGGTCATGAGGATGCTGGCAGTAATACTCTTGGTA...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATGCGGGGCTCATGGAATaGCGATGGGACTGTCCGCAC +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDAGLME*RWDCPH
Trigger: GTGCGGACAGTCCCATCGGCATTCCATGAGCCCCGC...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTATCGATGTTCGTGGGTaGCCAGTTTTCTTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIIDVRG*PVFFSE
Trigger: CTCAGAGAAGAAAACTGGGCACCCACGAACATCGAT...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTCTTCTCCTTGGCGCTTaGTATGACACTGAGAGACTT +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRILLLGA*YDTERL
Trigger: AAGTCTCTCAGTGTCATAGCAAGCGCCAAGGAGAAG...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGTCCGTTCTCCTCTTTTaGCCTCTCTGGGAGAACTGG +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSSVLLF*PLWENW
Trigger: CCAGTTCTCCCAGAGAGGGCAAAAGAGGAGAACGGA...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCACTTTGGGGGCTGCTTTaGTTTGCAAATGGACCTTAC +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRALWGLL*FANGPY
Trigger: GTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAG...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAGCTTTGGAATCTCACTaGATGATCATGTCGGTAGGG +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAALESH*MIMSVG
Trigger: CCCTACCGACATGATCATGCAGTGAGATTCCAAAGC...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAGATGCAGCCTGCACATaGATTGAGAAGGACAACCTA +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRADAACT*IEKDNL
Trigger: TAGGTTGTCCTTCTCAATGCATGTGCAGGCTGCATC...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTGATGCAGCCTGCACATaGATTGAGAAGGACAACCTA +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIDAACT*IEKDNL
Trigger: TAGGTTGTCCTTCTCAATGCATGTGCAGGCTGCATC...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTCTTGGGGGTCGCGGCTaGCGCCAACAGCTCCCAATC +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVLGGRG*RQQLPI
Trigger: GATTGGGAGCTGTTGGCGCCAGCCGCGACCCCCAAG...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTAGATGGTGCCATCGGTaGAGCGGCTCCAGGGAGCCG +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVRWCHR*SGSREP
Trigger: CGGCTCCCTGGAGCCGCTCCACCGATGGCACCATCT...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGTCAGGGTCTCCTCCTTaGATTTCCCTGTGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSSGSPP*ISLCSL
Trigger: CAGGGAACACAGGGAAATCCAAGGAGGAGACCCTGA...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTGTCTTCTGTGTCTCCTaGTTTACCTGGCTTAGGATC +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIVFCVS*FTWLRI
Trigger: GATCCTAAGCCAGGTAAACCAGGAGACACAGAAGAC...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTTTGAGGTGGCATTTATaGGTTCCTGAAAACCAGCCA +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRILRWHL*VPENQP
Trigger: TGGCTGGTTTTCAGGAACTCATAAATGCCACCTCAA...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCATCGTTGAGCCGTTCGTaGAAGAAACACCTTCAAAAC +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRASLSRS*KKHLQN
Trigger: GTTTTGAAGGTGTTTCTTTCACGAACGGCTCAACGA...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTATATTGAAGATGAGGTaGTCGGATGTTTTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIILKMR*SDVFPW
Trigger: CCAGGGGAAAACATCCGATCACCTCATCTTCAATAT...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAAAAGCAACCCAATGGTaGCTGTCACAGTCAAATGAG +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAKATQW*LSQSNE
Trigger: CTCATTTGACTGTGACAGTCACCATTGGGTTGCTTT...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTCTGGAAGTTATTACTTaGGTTATAGGAGCCACGCAC +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRILEVIT*VIGATH
Trigger: GTGCGTGGCTCCTATAACTCAAGTAATAACTTCCAG...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAGGCCAAATAAGCAGTTaGTACTTGGGTGTTTACAGG +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAGQISS*YLGVYR
Trigger: CCTGTAAACACCCAAGTATCAACTGCTTATTTGGCC...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTAGCTTTGTGAAACAGTaGAGTGCTTGCTTACTCCTG +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRISFVKQ*SACLLL
Trigger: CAGGAGTAAGCAAGCACTTCACTGTTTCACAAAGCT...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTTCTAGGCACTCTCACTaGTTTATGCTGGTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRISRHSH*FMLVEN
Trigger: ATTCTCCACCAGCATAAATCAGTGAGAGTGCCTAGA...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCACACTTACAGCTTTATTaGCTCTACGACTCTCGGTTG +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAHLQLY*LYDSRL
Trigger: CAACCGAGAGTCGTAGAGTCAATAAAGCTGTAAGTG...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTGTTGGCCAGGTGGGGTaGGGAGGAGGACAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVVGQVG*GGGQVL
Trigger: CAAGACCTGTCCTCCTCCGCACCCCACCTGGCCAAC...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGTGCCCGGATGCTCTTTaGTTTGCGAAAGTGGTAGAC +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSCPDAL*FAKVVD
Trigger: GTCTACCACTTTCGCAAAGCAAAGAGCATCCGGGCA...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTATATGCTTTGGGGGCTaGTTTGCTTTGCAAATGGAC +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIICFGG*FALQMD
Trigger: GTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAAGCTTAGGATTCCCATaGCAAGAGATCAGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRASLGFP*QEISVE
Trigger: TTCCACACTGATCTCTTGGCATGGGAATCCTAAGCT...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCATGGGTGAGGAAGATTTaGGCACAGCTTTGTGAAACA +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAWVRKI*AQLCET
Trigger: TGTTTCACAAAGCTGTGCGCAAATCTTCCTCACCCA...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATGAGATTGGCCCCGGGTaGCTAAGCTACCGTCGCAGA +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDEIGPG*LSYRRR
Trigger: TCTGCGACGGTAGCTTAGCCACCCGGGGCCAATCTC...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376351.4
CDS-3UTR CCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATGTTTCTGCGCCAAGATaGTGCCATCGGTGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDVSAPR*CHRWSG
Trigger: GCCGCTCCACCGATGGCACCATCTTGGCGCAGAAAC...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGTTCCTGGACGAAGCATaGGCTGTCATCAGCACAGAA +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSFLDEA*AVISTE
Trigger: TTCTGTGCTGATGACAGCCCATGCTTCGTCCAGGAA...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTCCTTTGGCTGTGCCATaGTCGGCGCCCTCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVPLAVP*SAPSLS
Trigger: GGACAAGGAGGGCGCCGACCATGGCACAGCCAAAGG...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCACTATGCGCTTCTGATTaGATTGCTGACAAACCTCAG +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRALCASD*IADKPQ
Trigger: CTGAGGTTTGTCAGCAATCCAATCAGAAGCGCATAG...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTCCTCTCTGGGAGAACTaGAGTCTTGGAAATCAAAAG +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIPLWEN*SLGNQK
Trigger: CTTTTGATTTCCAAGACTCCAGTTCTCCCAGAGAGG...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCATTTGGTTGAGCTaGGGTCTCAAACTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSSIWLS*GLKLPR
Trigger: CCTTGGGAGTTTGAGACCCCAGCTCAACCAAATGCT...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAACTTCTTCCAGCATTTaGTTGAGCTGGGGTCTCAAA +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRATSSSI*LSWGLK
Trigger: TTTGAGACCCCAGCTCAACCAAATGCTGGAAGAAGT...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAGTCTCCTGGTTTACCTaGCTTAGGATCTTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAVSWFT*LRIFKV
Trigger: GACTTTGAAGATCCTAAGCCAGGTAAACCAGGAGAC...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTGTCTCCTGGTTTACCTaGCTTAGGATCTTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIVSWFT*LRIFKV
Trigger: GACTTTGAAGATCCTAAGCCAGGTAAACCAGGAGAC...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAGACATAGGCTTCTTCTaGCACATCTTTTGTACTTCC +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRADIGFF*HIFCTS
Trigger: GGAAGTACAAAAGATGTGTCAGAAGAAGCCTATGTC...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGGGGCTTGGAAGGAGATaGTGGCAAGTCGTAAATACT +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSGLGRR*WQVVNT
Trigger: AGTATTTACGACTTGCCATCATCTCCTTCCAAGCCC...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATCTGCCAGCATCCTCATaGCCCGTCCGCCAGTCATAT +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDLPASS*PVRQSY
Trigger: ATATGACTGGCGGACGGGTCATGAGGATGCTGGCAG...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTCCCCTGGCCAATAAGTaGAATCTGTTTCTCCAAATT +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIPLANK*NLFLQI
Trigger: AATTTGGAGAAACAGATTTCACTTATTGGCCAGGGG...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAACCTCTTTGGGATTTaGGCCCAGCAAGTTCTACCT +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSNLFGI*AQQVLP
Trigger: AGGTAGAACTTGCTGGGCTCAAATCCCAAAGAGGTT...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGTTGCGCACAGCTTTGTaGAACAGTGAAGTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSLRTAL*NSEVLA
Trigger: AGCAAGCACTTCACTGTTTCACAAAGCTGTGCGCAA...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATTCCTCGGCGAGTTTCTaGGCCAAGATGGTGCCATCG +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDSSASF*AKMVPS
Trigger: CGATGGCACCATCTTGGCGCAGAAACTCGCCGAGGA...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAATCCTGCTTTGCAAATaGACTCATAGGCTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAILLCK*THRLQE
Trigger: TTCTTGGAGCCTATGAGTGCATTTGCAAAGCAGGAT...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAGATAGAATCCTGCTTTaGAAATGCACTCATAGGCTC +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRADRILL*KCTHRL
Trigger: GAGCCTATGAGTGCATTTGCAAAGCAGGATTCTATC...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGGGATGCTCTTTGCTTTaGGAAAGTGGTAGACCACCA +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSGCSLL*ESGRPP
Trigger: TGGTGGTCTACCACTTTCGCAAAGCAAAGAGCATCC...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCACTTCAGCCTTATCTATaGGCTTCTGATTGGATTGCT +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRALQPYL*ASDWIA
Trigger: AGCAATCCAATCAGAAGCGCATAGATAAGGCTGAAG...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTCTTCAGCCTTATCTATaGGCTTCTGATTGGATTGCT +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRILQPYL*ASDWIA
Trigger: AGCAATCCAATCAGAAGCGCATAGATAAGGCTGAAG...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGGCTTTGGAATCTCACTaGATGATCATGTCGGTAGGG +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSALESH*MIMSVG
Trigger: CCCTACCGACATGATCATGCAGTGAGATTCCAAAGC...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTCTACCTGTCATAACTTaGATGCAGAAACCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRILPVIT*MQKPRK
Trigger: CTTCCTAGGTTTCTGCATGCAAGTTATGACAGGTAG...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTAAATCAAGTCACCTGTaGCAGCGCTGGCCGTGCCCG +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVKSSHL*QRWPCP
Trigger: CGGGCACGGCCAGCGCTGCCACAGGTGACTTGATTT...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376351.4
CDS-3UTR CCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCATACACAGGGCTTaGAAGGAGATGATGGCAAGT +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSSIHRA*KEMMAS
Trigger: ACTTGCCATCATCTCCTTCCAAGCCCTGTGTATGCT...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGTCCGCCAGTCATATATaGAATTCGTTGAGCCGTTCG +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSSASHI*NSLSRS
Trigger: CGAACGGCTCAACGAATTCCATATATGACTGGCGGA...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTTCGGATGTTTTCCCCTaGCCAATAAGTGAAATCTGT +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRISDVFP*PISEIC
Trigger: ACAGATTTCACTTATTGGCCAGGGGAAAACATCCGA...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTACAGGGATTCCAGTGTaGAATTTTCTGTTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRITGIPV*NFLLSP
Trigger: AGGAGACAACAGAAAATTCCACACTGGAATCCCTGT...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTACGGCACCGACTCCGTaGACTCAGCCTCGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVTAPTP*TQPRCL
Trigger: AAGACAGCGAGGCTGAGTCCACGGAGTCGGTGCCGT...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTGCCCAGCACACACATTaGCTGCACGAGGCTGACCTC +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVAQHTH*LHEADL
Trigger: GAGGTCAGCCTCGTGCAGCCAATGTGTGTGCTGGGC...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTCTTTCTTTGCAAATCTaGTACGTCTTCTGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRILSLQI*YVFCVS
Trigger: GGAGACACAGAAGACGTACCAGATTTGCAAAGAAAG...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTAATTGGCATACACTCTaGATTGTTGAGGTGGCATTT +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRINWHTL*IVEVAF
Trigger: AAATGCCACCTCAACAATTCAGAGTGTATGCCAATT...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTATATATGGAATTCGTTaGGCCGTTCGTGAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIIYGIR*AVRERN
Trigger: GTTTCTTTCACGAACGGCTCAACGAATTCCATATAT...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAATATATGGAATTCGTTaGGCCGTTCGTGAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAIYGIR*AVRERN
Trigger: GTTTCTTTCACGAACGGCTCAACGAATTCCATATAT...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGTGCTGTGGGATTTCTTaGGTGAGAAGACTCGGTTTT +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSCCGIS*VRRLGF
Trigger: AAAACCGAGTCTTCTCACTCAAGAAATCCCACAGCA...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATTCTGAGCTGAGGTTGTaGGCGCTTGCTGACTTGCAC +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDSELRL*ALADLH
Trigger: GTGCAAGTCAGCAAGCGCTCACAACCTCAGCTCAGA...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTCATGTTTTCCTTGATTaGCAAATCCTCCTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIHVFLD*QILLGN
Trigger: ATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATG...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGCAGTGCTTGGGAGAATaGAGATTCCATACCACCTTA +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSQCLGE*RFHTTL
Trigger: TAAGGTGGTATGGAATCTTCATTCTCCCAAGCACTG...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGGGCCAAATAAGCAGTTaGTACTTGGGTGTTTACAGG +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSGQISS*YLGVYR
Trigger: CCTGTAAACACCCAAGTATCAACTGCTTATTTGGCC...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCTTTGTGAAACAGTaGAGTGCTTGCTTACTCCTG +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSSFVKQ*SACLLL
Trigger: CAGGAGTAAGCAAGCACTTCACTGTTTCACAAAGCT...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGTCTAGGCACTCTCACTaGTTTATGCTGGTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSSRHSH*FMLVEN
Trigger: ATTCTCCACCAGCATAAATCAGTGAGAGTGCCTAGA...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATTCCTCTTTAGAGCACTaGCGGCTGACTGTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDSSLEH*RLTVSG
Trigger: CCCAGAGACAGTCAGCCGGCAGTGCTCTAAAGAGGA...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTGAGCGCTTGCTGACTTaGACACCAACGGCACCGACT +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVERLLT*TPTAPT
Trigger: AGTCGGTGCCGTTGGTGTGCAAGTCAGCAAGCGCTC...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGATATGCTTTGGGGGCTaGTTTGCTTTGCAAATGGAC +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSICFGG*FALQMD
Trigger: GTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCTTAGGATTCCCATaGCAAGAGATCAGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSSLGFP*QEISVE
Trigger: TTCCACACTGATCTCTTGGCATGGGAATCCTAAGCT...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGTGGGTGAGGAAGATTTaGGCACAGCTTTGTGAAACA +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSWVRKI*AQLCET
Trigger: TGTTTCACAAAGCTGTGCGCAAATCTTCCTCACCCA...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATCATCTGGGTGGTGCCTaGGTTCAGGTCAGAATTGGC +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDHLGGA*VQVRIG
Trigger: GCCAATTCTGACCTGAACCCAGGCACCACCCAGATG...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATTGTCCTTCATCTGGGTaGTGCCTGGGTTCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDCPSSG*CLGSGQ
Trigger: CTGACCTGAACCCAGGCACCACCCAGATGAAGGACA...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTTCAGGGCAGACATTGTaGGCTATTTTCCTTAAACAT +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRISGQTL*AIFLKH
Trigger: ATGTTTAAGGAAAATAGCCCACAATGTCTGCCCTGA...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTATCTTCAAAGTCCCATaGATACATATTGATCAGGGC +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIIFKVP*IHIDQG
Trigger: GCCCTGATCAATATGTATCCATGGGACTTTGAAGAT...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCACCAAATATTTCATGGTaGGATGCTGTAGGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAPNISW*DAVGFR
Trigger: TCTGAAACCTACAGCATCCCACCATGAAATATTTGG...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTCCAAATATTTCATGGTaGGATGCTGTAGGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIPNISW*DAVGFR
Trigger: TCTGAAACCTACAGCATCCCACCATGAAATATTTGG...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTCGAAGGCCGGGCGGCTaGTTAATTGCAGCCTTTAGG +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVRRPGG*LIAAFR
Trigger: CCTAAAGGCTGCAATTAACCAGCCGCCCGGCCTTCG...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650135.1
3UTR CAA 72 bp TTATTTGTGCTGGGAGTGTCCTGGCCAAATAAGCAGTaGATACTTGGGTGTTTACAGGGAGAAAAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: LFVLGVSWPNKQ*ILGCLQGEKGK
Trigger: CTTCCCTTTTTCTCCCTGTAAACACCCAAGTATCAACTGCTTATTTGGCCAGGACACTCCCAGCACAAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGATCTTTTGTACTTCCTaGAATATGCTGATCCGGACC +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSIFCTS*NMLIRT
Trigger: GGTCCGGATCAGCATATTTCAGGAAGTACAAAAGAT...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGGACATAGGCTTCTTCTaGCACATCTTTTGTACTTCC +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSDIGFF*HIFCTS
Trigger: GGAAGTACAAAAGATGTGTCAGAAGAAGCCTATGTC...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGACCTTCAAAACCCTGTaGAGTTTGAGAGTGACAGTT +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSTFKTL*SLRVTV
Trigger: AACTGTCACTCTCAAACTTCACAGGGTTTTGAAGGT...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAACATCCAATCAGACTaGAGTCTTGAGGCAAGAACA +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSNIQSD*SLEART
Trigger: TGTTCTTGCCTCAAGACTTCAGTCTGATTGGATGTT...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATCTTCCAGCATTTGGTTaGGCTGGGGTCTCAAACTCC +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDLPAFG*AGVSNS
Trigger: GGAGTTTGAGACCCCAGCTCAACCAAATGCTGGAAG...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTAAAGTCACTGATGCTTaGCTGCATAATTCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIKVTDA*LHNSQE
Trigger: TTCTTGAGAATTATGCAGTCAAGCATCAGTGACTTT...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTGAACCACAGATTAAGTaGAGACACTTACAGCTTTAT +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIEPQIK*RHLQLY
Trigger: ATAAAGCTGTAAGTGTCTTCACTTAATCTGTGGTTC...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATTCGTCCTGCAAGTTCTaGTCCCGCGACTTATTGCTC +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDSSCKF*SRDLLL
Trigger: GAGCAATAAGTCGCGGGAGCAGAACTTGCAGGACGA...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAGAATACAGCGAAATGTaGTTGGCTCAAAGTACAAAA +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAEYSEM*LAQSTK
Trigger: TTTTGTACTTTGAGCCAAGCACATTTCGCTGTATTC...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCACATCTCGTGGGTTATTaGTTGAATGTGAAAACTTTG +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAHLVGY*LNVKTL
Trigger: CAAAGTTTTCACATTCAAGCAATAACCCACGAGATG...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTGGCAGTTCTTCGCTCTaGCCAGCACACACATTGGCT +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVGSSSL*PAHTLA
Trigger: AGCCAATGTGTGTGCTGGGCAGAGCGAAGAACTGCC...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCACGTGATGTTAAAGGTTaGTGGAAGTTATTACTTGAG +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRARDVKG*WKLLLE
Trigger: CTCAAGTAATAACTTCCAGCAACCTTTAACATCACG...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTTCTTCTTCCTGGAGATaGTACACTTTAAAACTATCC +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRISSSWR*YTLKLS
Trigger: GGATAGTTTTAAAGTGTAGCATCTCCAGGAAGAAGA...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATGGACAGGATGCAGCCTaGACATGCATTGAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDGQDAA*TCIEKD
Trigger: GTCCTTCTCAATGCATGTGCAGGCTGCATCCTGTCC...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAAATACTTATCTTCCTaGACGAAGCATGGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSKYLSS*TKHGLS
Trigger: TGACAGCCCATGCTTCGTCCAGGAAGATAAGTATTT...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAACAGCGAAATGTGCTTaGCTCAAAGTACAAAATAAC +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRATAKCA*LKVQNN
Trigger: GTTATTTTGTACTTTGAGCCAAGCACATTTCGCTGT...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGTGTTTCTCCAAATTCTaGCACACAGATGAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSCFSKF*HTDEVQ
Trigger: CTGGACTTCATCTGTGTGCCAGAATTTGGAGAAACA...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGTCGGATGTTTTCCCCTaGCCAATAAGTGAAATCTGT +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSSDVFP*PISEIC
Trigger: ACAGATTTCACTTATTGGCCAGGGGAAAACATCCGA...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATGAGCACCGCTTTTTCTaGAGGTGGGGGTTGTTTGTG +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDEHRFF*RWGLFV
Trigger: CACAAACAACCCCCACCTCCAGAAAAAGCGGTGCTC...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTCCGGCTGACTGTCTCTaGGATCTCCGTAATGCGTCT +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVPADCL*DLRNAS
Trigger: AGACGCATTACGGAGATCCCAGAGACAGTCAGCCGG...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATTCAGGGTCTCCTCCTTaGATTTCCCTGTGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDSGSPP*ISLCSL
Trigger: CAGGGAACACAGGGAAATCCAAGGAGGAGACCCTGA...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGACAGGGATTCCAGTGTaGAATTTTCTGTTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSTGIPV*NFLLSP
Trigger: AGGAGACAACAGAAAATTCCACACTGGAATCCCTGT...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGTTTGGCAAAGGTTTCTaGGATTTAGTGCGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSFGKGF*DLVRSS
Trigger: GGAAGAACGCACTAAATCCCAGAAACCTTTGCCAAA...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATAAGTTGTCCTTCATCTaGGTGGTGCCTGGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDKLSFI*VVPGFR
Trigger: CCTGAACCCAGGCACCACCCAGATGAAGGACAACTT...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCATCCTGGTGTCCTATTTaGTTGAGATTTTCATTCTCT +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRASWCPI*LRFSFS
Trigger: AGAGAATGAAAATCTCAACCAAATAGGACACCAGGA...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTGCCAAGAGATCAGTGTaGAATGCAATAAGCTTTATA +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIAKRSV*NAISFI
Trigger: TATAAAGCTTATTGCATTCCACACTGATCTCTTGGC...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAGCCAAGAGATCAGTGTaGAATGCAATAAGCTTTATA +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAAKRSV*NAISFI
Trigger: TATAAAGCTTATTGCATTCCACACTGATCTCTTGGC...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTCTTCCTGAAATATGCTaGTCCGGACCCCTTCTCCGA +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVLPEIC*SGPLLR
Trigger: TCGGAGAAGGGGTCCGGATCAGCATATTTCAGGAAG...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATCACTCCAGGCTGAATTaGTACTGCTGTTCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDHSRLN*YCCSGR
Trigger: CCTACCTGAACAGCAGTATCAATTCAGCCTGGAGTG...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATTTTTCTTCTCTGAGCTaGGGTTGTGAGCGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDFSSLS*GCERLL
Trigger: CAGCAAGCGCTCACAACCTCAGCTCAGAGAAGAAAA...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATCGCGACTTATTGCTCTaGAGCATCACGTTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDRDLLL*SITLRK
Trigger: CTTCCTCAACGTGATGCTGCAGAGCAATAAGTCGCG...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTTCGTCCTGCAAGTTCTaGTCCCGCGACTTATTGCTC +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVSSCKF*SRDLLL
Trigger: GAGCAATAAGTCGCGGGAGCAGAACTTGCAGGACGA...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATTGGGACTGTCCGCACTaGATAGCAGAGATAAACACC +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDWDCPH*IAEINT
Trigger: GGTGTTTATCTCTGCTATGCAGTGCGGACAGTCCCA...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATCTGACAAACCTCAGCTaGCTTAGGCTTGTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDLTNLS*LRLVVR
Trigger: TCTCACCACAAGCCTAAGGCAGCTGAGGTTTGTCAG...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAAAAATAGTTATTTGTaGTGGGAGTGTCCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSKNSYL*WECPGQ
Trigger: TTGGCCAGGACACTCCCAGCACAAATAACTATTTTT...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAACTCTCACTGATTTATaGTGGTGGAGAATAATCTAT +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRATLTDL*WWRIIY
Trigger: ATAGATTATTCTCCACCAGCATAAATCAGTGAGAGT...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTGGACAGGATGCAGCCTaGACATGCATTGAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVGQDAA*TCIEKD
Trigger: GTCCTTCTCAATGCATGTGCAGGCTGCATCCTGTCC...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCATATTTCATGGTGGGATaGTGTAGGTTTCAGATAATA +
Preference number: 4 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAYFMVG*CRFQII
Trigger: TATTATCTGAAACCTACAGCATCCCACCATGAAATA...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTCTGTGGGTAGGCTACTaGACTCTTCCGTTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVLWVGY*TLPFGL
Trigger: GAGACCAAACGGAAGAGTCCAGTAGCCTACCCACAG...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATCCTCTTGGCTTTCTGTaGGTAGGCTACTGGACTCTT +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDPLGFL*VGYWTL
Trigger: AAGAGTCCAGTAGCCTACCCACAGAAAGCCAAGAGG...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATTCTTCCAAAATGGACTaGCCTTGGCTCTCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDSSKMD*PWLSQR
Trigger: CCTTTGGGAGAGCCAAGGCCAGTCCATTTTGGAAGA...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTCTCACTGATTTATGCTaGTGGAGAATAATCTATGAA +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRILTDLC*WRIIYE
Trigger: TTCATAGATTATTCTCCACCAGCATAAATCAGTGAG...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTCTTATTTATAAACCCTaGCTTAAAAACAAGGACAGG +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRILIYKP*LKNKDR
Trigger: CCTGTCCTTGTTTTTAAGCCAGGGTTTATAAATAAG...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTCACCAAAGTTTACAATaGGTTGAGTTATACTTCATG +
Preference number: 4 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIHQSLQ*VELYFM
Trigger: CATGAAGTATAACTCAACCCATTGTAAACTTTGGTG...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGATAGATACGTGCTTTTaGACTTTTGATTCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSIDTCF*TFDSEG
Trigger: GCCTTCAGAATCAAAAGTTCAAAAGCACGTATCTAT...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTCTGACTTCTCCATTATaGCGTTGTTGCTCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVLTSPL*RCCSCP
Trigger: GGGGCAAGAGCAACAACGTCATAATGGAGAAGTCAG...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATCCCATGGATACATATTaGTCAGGGCAGACATTGTGG +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDPMDTY*SGQTLW
Trigger: CCACAATGTCTGCCCTGATCAATATGTATCCATGGG...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAAAGTCACTGATGCTTaGCTGCATAATTCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSKVTDA*LHNSQE
Trigger: TTCTTGAGAATTATGCAGTCAAGCATCAGTGACTTT...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATAGCCTGCACATGCATTaGGAAGGACAACCTAGCAAA +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDSLHMH*EGQPSK
Trigger: TTTGCTAGGTTGTCCTTCTCAATGCATGTGCAGGCT...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTCGCGACTTATTGCTCTaGAGCATCACGTTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVRDLLL*SITLRK
Trigger: CTTCCTCAACGTGATGCTGCAGAGCAATAAGTCGCG...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATTACCAAGAGTATTACTaGCAGCATCCTCATGACCCG +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDYQEYY*QHPHDP
Trigger: CGGGTCATGAGGATGCTGGCAGTAATACTCTTGGTA...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATATCGATGTTCGTGGGTaGCCAGTTTTCTTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDIDVRG*PVFFSE
Trigger: CTCAGAGAAGAAAACTGGGCACCCACGAACATCGAT...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATCTTCTCCTTGGCGCTTaGTATGACACTGAGAGACTT +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDLLLGA*YDTERL
Trigger: AAGTCTCTCAGTGTCATAGCAAGCGCCAAGGAGAAG...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTCTGACAAACCTCAGCTaGCTTAGGCTTGTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVLTNLS*LRLVVR
Trigger: TCTCACCACAAGCCTAAGGCAGCTGAGGTTTGTCAG...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGTCTTCTTCCTGGAGATaGTACACTTTAAAACTATCC +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSSSSWR*YTLKLS
Trigger: GGATAGTTTTAAAGTGTAGCATCTCCAGGAAGAAGA...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTAGAATGTTTCGAGATTaGCCCCGGGTGGCTAAGCTA +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVRMFRD*PRVAKL
Trigger: TAGCTTAGCCACCCGGGGCCAATCTCGAAACATTCT...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376351.4
CDS-3UTR CCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTCCTCTTGGCTTTCTGTaGGTAGGCTACTGGACTCTT +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVPLGFL*VGYWTL
Trigger: AAGAGTCCAGTAGCCTACCCACAGAAAGCCAAGAGG...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGCCTTTAAGGAAAAAGTaGGGTTTTTCTCCATTTCAG +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSPLRKK*GFSPFQ
Trigger: CTGAAATGGAGAAAAACCCCACTTTTTCCTTAAAGG...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTTCTCATCTTCCAAAATaGACTGGCCTTGGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVSHLPK*TGLGSP
Trigger: GGGAGAGCCAAGGCCAGTCCATTTTGGAAGATGAGA...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTTTGATGCTACAGCTTTaGGGGGCAGTTCTTCGCTCT +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVLMLQL*GAVLRS
Trigger: AGAGCGAAGAACTGCCCCCCAAAGCTGTAGCATCAA...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGTCCTGGTGTCCTATTTaGTTGAGATTTTCATTCTCT +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSSWCPI*LRFSFS
Trigger: AGAGAATGAAAATCTCAACCAAATAGGACACCAGGA...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTAGCATTTGGTTGAGCTaGGGTCTCAAACTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVSIWLS*GLKLPR
Trigger: CCTTGGGAGTTTGAGACCCCAGCTCAACCAAATGCT...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATGTCTTCTGTGTCTCCTaGTTTACCTGGCTTAGGATC +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDVFCVS*FTWLRI
Trigger: GATCCTAAGCCAGGTAAACCAGGAGACACAGAAGAC...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGTTACCAAATATTTCATaGTGGGATGCTGTAGGTTTC +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSLPNIS*WDAVGF
Trigger: GAAACCTACAGCATCCCACCATGAAATATTTGGTAA...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTGGGCTTGGAAGGAGATaGTGGCAAGTCGTAAATACT +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVGLGRR*WQVVNT
Trigger: AGTATTTACGACTTGCCATCATCTCCTTCCAAGCCC...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTATAATCCCAGATTTCTaGGGCTTTCTTGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVIIPDF*GFLGSS
Trigger: GGAGGAGCCAAGAAAGCCTCAGAAATCTGGGATTAT...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATGCCTTAGGCTTGTGGTaGGATTTCTCCTTTAAGGAA +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDALGLW*DFSFKE
Trigger: TTCCTTAAAGGAGAAATCTCACCACAAGCCTAAGGC...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATCTGGAAGTTATTACTTaGGTTATAGGAGCCACGCAC +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDLEVIT*VIGATH
Trigger: GTGCGTGGCTCCTATAACTCAAGTAATAACTTCCAG...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTAACCTCTTTGGGATTTaGGCCCAGCAAGTTCTACCT +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVNLFGI*AQQVLP
Trigger: AGGTAGAACTTGCTGGGCTCAAATCCCAAAGAGGTT...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATCACTTACAGCTTTATTaGCTCTACGACTCTCGGTTG +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDHLQLY*LYDSRL
Trigger: CAACCGAGAGTCGTAGAGTCAATAAAGCTGTAAGTG...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTGGATGCTCTTTGCTTTaGGAAAGTGGTAGACCACCA +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVGCSLL*ESGRPP
Trigger: TGGTGGTCTACCACTTTCGCAAAGCAAAGAGCATCC...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATGGGGCTGCTTTGCTTTaGAAATGGACCTTACATGTT +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDGAALL*KWTLHV
Trigger: AACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCC...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTCTTTGGGGGCTGCTTTaGTTTGCAAATGGACCTTAC +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVLWGLL*FANGPY
Trigger: GTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAG...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTTCCGCCAGTCATATATaGAATTCGTTGAGCCGTTCG +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVSASHI*NSLSRS
Trigger: CGAACGGCTCAACGAATTCCATATATGACTGGCGGA...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATCTATGCGCTTCTGATTaGATTGCTGACAAACCTCAG +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDLCASD*IADKPQ
Trigger: CTGAGGTTTGTCAGCAATCCAATCAGAAGCGCATAG...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATACTTCTTCCAGCATTTaGTTGAGCTGGGGTCTCAAA +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDTSSSI*LSWGLK
Trigger: TTTGAGACCCCAGCTCAACCAAATGCTGGAAGAAGT...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATGCAAGTGGCTCACAATaGCAATTTGCAGGACTTAGA +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDASGSQ*QFAGLR
Trigger: TCTAAGTCCTGCAAATTGCCATTGTGAGCCACTTGC...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGCTATGGTTATCAATCTaGAAAAATAACCTCCTGACT +
Preference number: 4 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSLWLSI*KNNLLT
Trigger: AGTCAGGAGGTTATTTTTCCAGATTGATAACCATAG...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTTCGTTGAGCCGTTCGTaGAAGAAACACCTTCAAAAC +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVSLSRS*KKHLQN
Trigger: GTTTTGAAGGTGTTTCTTTCACGAACGGCTCAACGA...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTATATTGAAGATGAGGTaGTCGGATGTTTTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVILKMR*SDVFPW
Trigger: CCAGGGGAAAACATCCGATCACCTCATCTTCAATAT...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTAAAGCAACCCAATGGTaGCTGTCACAGTCAAATGAG +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVKATQW*LSQSNE
Trigger: CTCATTTGACTGTGACAGTCACCATTGGGTTGCTTT...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTTGCTGTGGGATTTCTTaGGTGAGAAGACTCGGTTTT +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVCCGIS*VRRLGF
Trigger: AAAACCGAGTCTTCTCACTCAAGAAATCCCACAGCA...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATATCCTGCTTTGCAAATaGACTCATAGGCTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDILLCK*THRLQE
Trigger: TTCTTGGAGCCTATGAGTGCATTTGCAAAGCAGGAT...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATCTACCTGTCATAACTTaGATGCAGAAACCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDLPVIT*MQKPRK
Trigger: CTTCCTAGGTTTCTGCATGCAAGTTATGACAGGTAG...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATAAATACTTATCTTCCTaGACGAAGCATGGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDKYLSS*TKHGLS
Trigger: TGACAGCCCATGCTTCGTCCAGGAAGATAAGTATTT...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATTGTTTCTCCAAATTCTaGCACACAGATGAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDCFSKF*HTDEVQ
Trigger: CTGGACTTCATCTGTGTGCCAGAATTTGGAGAAACA...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATTTTGGCAAAGGTTTCTaGGATTTAGTGCGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDFGKGF*DLVRSS
Trigger: GGAAGAACGCACTAAATCCCAGAAACCTTTGCCAAA...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTCCTCTCTGGGAGAACTaGAGTCTTGGAAATCAAAAG +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVPLWEN*SLGNQK
Trigger: CTTTTGATTTCCAAGACTCCAGTTCTCCCAGAGAGG...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTTACATGTCGAGCAAGTaGCTCACAATGGCAATTTGC +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVYMSSK*LTMAIC
Trigger: GCAAATTGCCATTGTGAGCCACTTGCTCGACATGTA...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTCCCCTGGCCAATAAGTaGAATCTGTTTCTCCAAATT +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVPLANK*NLFLQI
Trigger: AATTTGGAGAAACAGATTTCACTTATTGGCCAGGGG...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTAACATCCAATCAGACTaGAGTCTTGAGGCAAGAACA +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVNIQSD*SLEART
Trigger: TGTTCTTGCCTCAAGACTTCAGTCTGATTGGATGTT...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATGGTGGGGGTTGTTTGTaGTCATCTTCTTTCTTTTAT +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDGGGCL*SSSFFY
Trigger: ATAAAAGAAAGAAGATGATCACAAACAACCCCCACC...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTGATAGAATCCTGCTTTaGAAATGCACTCATAGGCTC +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVDRILL*KCTHRL
Trigger: GAGCCTATGAGTGCATTTGCAAAGCAGGATTCTATC...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTCTTTCTTTGCAAATCTaGTACGTCTTCTGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVLSLQI*YVFCVS
Trigger: GGAGACACAGAAGACGTACCAGATTTGCAAAGAAAG...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATAATAGTTATTTGTGCTaGGAGTGTCCTGGCCAAATA +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDNSYLC*ECPGQI
Trigger: TATTTGGCCAGGACACTCCCAGCACAAATAACTATT...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTAATTGGCATACACTCTaGATTGTTGAGGTGGCATTT +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVNWHTL*IVEVAF
Trigger: AAATGCCACCTCAACAATTCAGAGTGTATGCCAATT...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTGGTGGGGGTTGTTTGTaGTCATCTTCTTTCTTTTAT +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVGGGCL*SSSFFY
Trigger: ATAAAAGAAAGAAGATGATCACAAACAACCCCCACC...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTTTCTTGACCAAAGTCTaGCTTCTCCATTATGACGTT +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVFLTKV*LLHYDV
Trigger: AACGTCATAATGGAGAAGTCAGACTTTGGTCAAGAA...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATAGGTGCAATAACAATTaGATAGCTGCAGATTGCATA +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDRCNNN*IAADCI
Trigger: TATGCAATCTGCAGCTATTCAATTGTTATTGCACCT...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR TCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATGAACCACAGATTAAGTaGAGACACTTACAGCTTTAT +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDEPQIK*RHLQLY
Trigger: ATAAAGCTGTAAGTGTCTTCACTTAATCTGTGGTTC...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTAAAAATAGTTATTTGTaGTGGGAGTGTCCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVKNSYL*WECPGQ
Trigger: TTGGCCAGGACACTCCCAGCACAAATAACTATTTTT...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATACAGCGAAATGTGCTTaGCTCAAAGTACAAAATAAC +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDTAKCA*LKVQNN
Trigger: GTTATTTTGTACTTTGAGCCAAGCACATTTCGCTGT...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATCCTTTAAGGAAAAAGTaGGGTTTTTCTCCATTTCAG +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDPLRKK*GFSPFQ
Trigger: CTGAAATGGAGAAAAACCCCACTTTTTCCTTAAAGG...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATGCTTTGCTTTGCAAATaGACCTTACATGTTACATGT +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDALLCK*TLHVTC
Trigger: ACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGC...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTAATAGTTATTTGTGCTaGGAGTGTCCTGGCCAAATA +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVNSYLC*ECPGQI
Trigger: TATTTGGCCAGGACACTCCCAGCACAAATAACTATT...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTCATCTCGTGGGTTATTaGTTGAATGTGAAAACTTTG +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVHLVGY*LNVKTL
Trigger: CAAAGTTTTCACATTCAAGCAATAACCCACGAGATG...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATACTCTCACTGATTTATaGTGGTGGAGAATAATCTAT +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDTLTDL*WWRIIY
Trigger: ATAGATTATTCTCCACCAGCATAAATCAGTGAGAGT...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTACATTTTCCAGTGCTTaGGAGAATGAAGATTCCATA +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVTFSSA*ENEDSI
Trigger: TATGGAATCTTCATTCTCCCAAGCACTGGAAAATGT...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTGCTTTGCTTTGCAAATaGACCTTACATGTTACATGT +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVALLCK*TLHVTC
Trigger: ACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGC...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATCTCACTGATTTATGCTaGTGGAGAATAATCTATGAA +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDLTDLC*WRIIYE
Trigger: TTCATAGATTATTCTCCACCAGCATAAATCAGTGAG...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATCTTATTTATAAACCCTaGCTTAAAAACAAGGACAGG +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDLIYKP*LKNKDR
Trigger: CCTGTCCTTGTTTTTAAGCCAGGGTTTATAAATAAG...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATCACCAAAGTTTACAATaGGTTGAGTTATACTTCATG +
Preference number: 4 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDHQSLQ*VELYFM
Trigger: CATGAAGTATAACTCAACCCATTGTAAACTTTGGTG...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
3UTR CAA 72 bp AGAGAAAGCTTACTGTACTTCAAGAATCAACTAAAGTaGATAGATAGCAGGTATTCTGTAAGGTGCAATAAC +
Preference number: 4 (lower is better)
Translates to: RESLLYFKNQLK*IDSRYSVRCNN
Trigger: GTTATTGCACCTTACAGAATACCTGCTATCTATCAACTTTAGTTGATTCTTGAAGTACAGTAAGCTTTCTCT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR GCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTTATTTCATGGTGGGATaGTGTAGGTTTCAGATAATA +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVYFMVG*CRFQII
Trigger: TATTATCTGAAACCTACAGCATCCCACCATGAAATA...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CCA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTCTATGGTTATCAATCTaGAAAAATAACCTCCTGACT +
Preference number: 4 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVLWLSI*KNNLLT
Trigger: AGTCAGGAGGTTATTTTTCCAGATTGATAACCATAG...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CCA 90 bp CAGCCTGGAGCCGAGCGGGTTACATGGCCTCGCGCTCCCAGCGGCTaGAGTCAGCCCGAGTCCGTCTCTCGGCCCGGCTGCCGCCACCGC +
Preference number: 5 (lower is better)
Translates to: QPGAERVTWPRAPSG*SQPESVSRPGCRHR
Trigger: GCGGTGGCGGCAGCCGGGCCGAGAGACGGACTCGGGCTGACTCCAGCCGCTGGGAGCGCGAGGCCATGTAACCCGCTCGGCTCCAGGCTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CCA 90 bp GCCCGCTGCGCGAGGGGCCGGCTGGGGATTACGCACCTCGCAGCCTaGAGCCGAGCGGGTTACATGGCCTCGCGCTCCCAGCGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: ARCARGRLGITHLAA*SRAGYMASRSQRLE
Trigger: CTCCAGCCGCTGGGAGCGCGAGGCCATGTAACCCGCTCGGCTCCAGGCTGCGAGGTGCGTAATCCCCAGCCGGCCCCTCGCGCAGCGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376351.4
CDS CCA 90 bp TCACCTGTGGCAGCGCTGGCCGTGCCCGCTGCGCGAGGGGCCGGCTaGGGATTACGCACCTCGCAGCCTGGAGCCGAGCGGGTTACATGG +
Preference number: 5 (lower is better)
Translates to: SPVAALAVPAARGAG*GLRTSQPGAERVTW
Trigger: CCATGTAACCCGCTCGGCTCCAGGCTGCGAGGTGCGTAATCCCCAGCCGGCCCCTCGCGCAGCGGGCACGGCCAGCGCTGCCACAGGTGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376351.4
CDS CCA 90 bp GGGCCGCGGCGGTGTAAGTGGGGCCTCCACTTGCGCCGGAGGCCGTaGAACCACTCGGTCTCCAGAGTGGCGTTGGCCAGGTGGGGTGCG +
Preference number: 5 (lower is better)
Translates to: GPRRCKWGLHLRRRP*NHSVSRVALARWGA
Trigger: CGCACCCCACCTGGCCAACGCCACTCTGGAGACCGAGTGGTTCCACGGCCTCCGGCGCAAGTGGAGGCCCCACTTACACCGCCGCGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS GCA 90 bp CGTCGCAGAAATCAAGTCACCTGTGGCAGCGCTGGCCGTGCCCGCTaGGCGAGGGGCCGGCTGGGGATTACGCACCTCGCAGCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: RRRNQVTCGSAGRAR*ARGRLGITHLAAWS
Trigger: GCTCCAGGCTGCGAGGTGCGTAATCCCCAGCCGGCCCCTCGCGCAGCGGGCACGGCCAGCGCTGCCACAGGTGACTTGATTTCTGCGACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376351.4
CDS CCA 90 bp GGCTGGGGATTACGCACCTCGCAGCCTGGAGCCGAGCGGGTTACATaGCCTCGCGCTCCCAGCGGCTGGAGTCAGCCCGAGTCCGTCTCT +
Preference number: 5 (lower is better)
Translates to: GWGLRTSQPGAERVT*PRAPSGWSQPESVS
Trigger: AGAGACGGACTCGGGCTGACTCCAGCCGCTGGGAGCGCGAGGCCATGTAACCCGCTCGGCTCCAGGCTGCGAGGTGCGTAATCCCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376351.4
CDS CCA 90 bp CGGAGGAGGACAGGTCTTGGAGCAGGATGCGGCTCTCCTCGCGCGTaGCCTGGAGGAAGACCTGTGGGGCCGGTGCGGACAGCGAATCGG +
Preference number: 5 (lower is better)
Translates to: RRRTGLGAGCGSPRA*PGGRPVGPVRTANR
Trigger: CCGATTCGCTGTCCGCACCGGCCCCACAGGTCTTCCTCCAGGCCACGCGCGAGGAGAGCCGCATCCTGCTCCAAGACCTGTCCTCCTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS GCA 90 bp AAGCTACCGTCGCAGAAATCAAGTCACCTGTGGCAGCGCTGGCCGTaGCCGCTGCGCGAGGGGCCGGCTGGGGATTACGCACCTCGCAGC +
Preference number: 5 (lower is better)
Translates to: KLPSQKSSHLWQRWP*PLREGPAGDYAPRS
Trigger: GCTGCGAGGTGCGTAATCCCCAGCCGGCCCCTCGCGCAGCGGGCACGGCCAGCGCTGCCACAGGTGACTTGATTTCTGCGACGGTAGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376351.4
CDS GCA 90 bp CCACGTCCATGGGCACCTCCTCGGCGAGTTTCTGCGCCAAGATGGTaGCATCGGTGGAGCGGCTCCAGGGAGCCGAGGAGTCCGAGGCAG +
Preference number: 5 (lower is better)
Translates to: PRPWAPPRRVSAPRW*HRWSGSREPRSPRQ
Trigger: CTGCCTCGGACTCCTCGGCTCCCTGGAGCCGCTCCACCGATGGCACCATCTTGGCGCAGAAACTCGCCGAGGAGGTGCCCATGGACGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS GCA 90 bp GCCGTGGAACCACTCGGTCTCCAGAGTGGCGTTGGCCAGGTGGGGTaGGGAGGAGGACAGGTCTTGGAGCAGGATGCGGCTCTCCTCGCG +
Preference number: 5 (lower is better)
Translates to: AVEPLGLQSGVGQVG*GGGQVLEQDAALLA
Trigger: CGCGAGGAGAGCCGCATCCTGCTCCAAGACCTGTCCTCCTCCGCACCCCACCTGGCCAACGCCACTCTGGAGACCGAGTGGTTCCACGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CCA 90 bp TGGGCACCTCCTCGGCGAGTTTCTGCGCCAAGATGGTGCCATCGGTaGAGCGGCTCCAGGGAGCCGAGGAGTCCGAGGCAGAGGCTCGAC +
Preference number: 5 (lower is better)
Translates to: WAPPRRVSAPRWCHR*SGSREPRSPRQRLD
Trigger: GTCGAGCCTCTGCCTCGGACTCCTCGGCTCCCTGGAGCCGCTCCACCGATGGCACCATCTTGGCGCAGAAACTCGCCGAGGAGGTGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CCA 90 bp AGGCCACGTCCATGGGCACCTCCTCGGCGAGTTTCTGCGCCAAGATaGTGCCATCGGTGGAGCGGCTCCAGGGAGCCGAGGAGTCCGAGG +
Preference number: 5 (lower is better)
Translates to: RPRPWAPPRRVSAPR*CHRWSGSREPRSPR
Trigger: CCTCGGACTCCTCGGCTCCCTGGAGCCGCTCCACCGATGGCACCATCTTGGCGCAGAAACTCGCCGAGGAGGTGCCCATGGACGTGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CCA 90 bp GCCACTTCCCCGGCAGGCCCGCCAACTCGTAGCGGCCGGAGCAGTTaGCTCGCTTCAGCTGGTGGGAGTCCCCGGTGTAGAGGTAAGAGG +
Preference number: 5 (lower is better)
Translates to: ATSPAGPPTRSGRSS*LASAGGSPRCRGKR
Trigger: CCTCTTACCTCTACACCGGGGACTCCCACCAGCTGAAGCGAGCCAACTGCTCCGGCCGCTACGAGTTGGCGGGCCTGCCGGGGAAGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CCA 90 bp TCCAGAGTGGCGTTGGCCAGGTGGGGTGCGGAGGAGGACAGGTCTTaGAGCAGGATGCGGCTCTCCTCGCGCGTGGCCTGGAGGAAGACC +
Preference number: 5 (lower is better)
Translates to: SRVALARWGAEEDRS*SRMRLSSRVAWRKT
Trigger: GGTCTTCCTCCAGGCCACGCGCGAGGAGAGCCGCATCCTGCTCCAAGACCTGTCCTCCTCCGCACCCCACCTGGCCAACGCCACTCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CCA 90 bp CGGAGGCCGTGGAACCACTCGGTCTCCAGAGTGGCGTTGGCCAGGTaGGGTGCGGAGGAGGACAGGTCTTGGAGCAGGATGCGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: RRPWNHSVSRVALAR*GAEEDRSWSRMRLS
Trigger: GGAGAGCCGCATCCTGCTCCAAGACCTGTCCTCCTCCGCACCCCACCTGGCCAACGCCACTCTGGAGACCGAGTGGTTCCACGGCCTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CCA 90 bp GTGGCTAAGCTACCGTCGCAGAAATCAAGTCACCTGTGGCAGCGCTaGCCGTGCCCGCTGCGCGAGGGGCCGGCTGGGGATTACGCACCT +
Preference number: 5 (lower is better)
Translates to: VAKLPSQKSSHLWQR*PCPLREGPAGDYAP
Trigger: AGGTGCGTAATCCCCAGCCGGCCCCTCGCGCAGCGGGCACGGCCAGCGCTGCCACAGGTGACTTGATTTCTGCGACGGTAGCTTAGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376351.4
CDS TCA 90 bp GCTTGTAACTCCCGTTCTCGCACTCCAGATAAGGCGGAGACCACTTaGAGTGGCTCTTGTCCCCGCCGAGCCCGTCCTTGCGCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: ACNSRSRTPDKAETT*SGSCPRRARPCAAS
Trigger: GCTGGCGGCGCAAGGACGGGCTCGGCGGGGACAAGAGCCACTTCAAGTGGTCTCCGCCTTATCTGGAGTGCGAGAACGGGAGTTACAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CCA 90 bp TCAGCTGGTGGGAGTCCCCGGTGTAGAGGTAAGAGGCCACGTCCATaGGCACCTCCTCGGCGAGTTTCTGCGCCAAGATGGTGCCATCGG +
Preference number: 5 (lower is better)
Translates to: SAGGSPRCRGKRPRP*APPRRVSAPRWCHR
Trigger: CCGATGGCACCATCTTGGCGCAGAAACTCGCCGAGGAGGTGCCCATGGACGTGGCCTCTTACCTCTACACCGGGGACTCCCACCAGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CCA 90 bp CGGGAGATGCTGGGCTCGCCCTCCAGAAGGCTCCACACCAGCGCCTaGTACCAATCCAGGTCGTCCTGCAAGTTCTGCTCCCGCGACTTA +
Preference number: 5 (lower is better)
Translates to: REMLGSPSRRLHTSA*YQSRSSCKFCSRDL
Trigger: TAAGTCGCGGGAGCAGAACTTGCAGGACGACCTGGATTGGTACCAGGCGCTGGTGTGGAGCCTTCTGGAGGGCGAGCCCAGCATCTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAGGAATCCGGCCGTCCTaGGGGGTCGCGGCTGGCGCC +
Preference number: 5 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAGIRPS*GVAAGA
Trigger: GGCGCCAGCCGCGACCCCCAAGGACGGCCGGATTCC...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS TCA 90 bp CCTGCAAGTTCTGCTCCCGCGACTTATTGCTCTGCAGCATCACGTTaGGGAAGTTGGTGGCGTGTGTCAGTGTGTCCAGCGCCCGGTGCA +
Preference number: 5 (lower is better)
Translates to: PASSAPATYCSAASR*GSWWRVSVCPAPGA
Trigger: TGCACCGGGCGCTGGACACACTGACACACGCCACCAACTTCCTCAACGTGATGCTGCAGAGCAATAAGTCGCGGGAGCAGAACTTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS TCA 90 bp GGCAGTTCTTCGCTCTGCCCAGCACACACATTGGCTGCACGAGGCTaGCCTCCGTTCTCCTCTTTTGCCCTCTCTGGGAGAACTGGAGTC +
Preference number: 5 (lower is better)
Translates to: GSSSLCPAHTLAARG*PPFSSFALSGRTGV
Trigger: GACTCCAGTTCTCCCAGAGAGGGCAAAAGAGGAGAACGGAGGTCAGCCTCGTGCAGCCAATGTGTGTGCTGGGCAGAGCGAAGAACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376351.4
ENST00000490549.1
ENST00000650135.1
CDS GCA 90 bp TCCAGAAGGCTCCACACCAGCGCCTGGTACCAATCCAGGTCGTCCTaGAAGTTCTGCTCCCGCGACTTATTGCTCTGCAGCATCACGTTG +
Preference number: 5 (lower is better)
Translates to: SRRLHTSAWYQSRSS*KFCSRDLLLCSITL
Trigger: CAACGTGATGCTGCAGAGCAATAAGTCGCGGGAGCAGAACTTGCAGGACGACCTGGATTGGTACCAGGCGCTGGTGTGGAGCCTTCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS GCA 90 bp TTGGCTGTGCCATGGTCGGCGCCCTCCTTGTCCTCTTTAGAGCACTaGCGGCTGACTGTCTCTGGGATCTCCGTAATGCGTCTCATGATG +
Preference number: 5 (lower is better)
Translates to: LAVPWSAPSLSSLEH*RLTVSGISVMRLMM
Trigger: CATCATGAGACGCATTACGGAGATCCCAGAGACAGTCAGCCGGCAGTGCTCTAAAGAGGACAAGGAGGGCGCCGACCATGGCACAGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376351.4
ENST00000490549.1
ENST00000650135.1
CDS-3UTR CAA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGGGAATCCGGCCGTCCTaGGGGGTCGCGGCTGGCGCC +
Preference number: 5 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSGIRPS*GVAAGA
Trigger: GGCGCCAGCCGCGACCCCCAAGGACGGCCGGATTCC...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS TCA 90 bp ATCGATGTTCGTGGGTGCCCAGTTTTCTTCTCTGAGCTGAGGTTGTaGGCGCTTGCTGACTTGCACACCAACGGCACCGACTCCGTGGAC +
Preference number: 5 (lower is better)
Translates to: IDVRGCPVFFSELRL*ALADLHTNGTDSVD
Trigger: GTCCACGGAGTCGGTGCCGTTGGTGTGCAAGTCAGCAAGCGCTCACAACCTCAGCTCAGAGAAGAAAACTGGGCACCCACGAACATCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376351.4
ENST00000490549.1
ENST00000650135.1
CDS GCA 90 bp CTCCACACCAGCGCCTGGTACCAATCCAGGTCGTCCTGCAAGTTCTaGTCCCGCGACTTATTGCTCTGCAGCATCACGTTGAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: LHTSAWYQSRSSCKF*SRDLLLCSITLRKL
Trigger: CAACTTCCTCAACGTGATGCTGCAGAGCAATAAGTCGCGGGAGCAGAACTTGCAGGACGACCTGGATTGGTACCAGGCGCTGGTGTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAAAGTGGGGCCTCCACTaGCGCCGGAGGCCGTGGAAC +
Preference number: 5 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAKWGLH*RRRPWN
Trigger: GTTCCACGGCCTCCGGCGCAAGTGGAGGCCCCACTT...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS GCA 90 bp CAATCCAGGTCGTCCTGCAAGTTCTGCTCCCGCGACTTATTGCTCTaGAGCATCACGTTGAGGAAGTTGGTGGCGTGTGTCAGTGTGTCC +
Preference number: 5 (lower is better)
Translates to: QSRSSCKFCSRDLLL*SITLRKLVACVSVS
Trigger: GGACACACTGACACACGCCACCAACTTCCTCAACGTGATGCTGCAGAGCAATAAGTCGCGGGAGCAGAACTTGCAGGACGACCTGGATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CCA 90 bp ACCTCCCAAGGACACACCTCCCCAATGTCAAAGTTGTCCTTCATCTaGGTGGTGCCTGGGTTCAGGTCAGAATTGGCAGTGGTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: TSQGHTSPMSKLSFI*VVPGFRSELAVVGL
Trigger: CAACCCCACCACTGCCAATTCTGACCTGAACCCAGGCACCACCCAGATGAAGGACAACTTTGACATTGGGGAGGTGTGTCCTTGGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376351.4
ENST00000490549.1
ENST00000650135.1
CDS-3UTR CAA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTCACTTGAAGTGGCTCTaGTCCCCGCCGAGCCCGTCC +
Preference number: 5 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIHLKWL*SPPSPS
Trigger: GGACGGGCTCGGCGGGGACAAGAGCCACTTCAAGTG...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS GCA 90 bp GGACGAAGCATGGGCTGTCATCAGCACAGAAGGGGCAGCCCTCCCTaGAAGGTAGGCAGACATAGGCTTCTTCTGACACATCTTTTGTAC +
Preference number: 5 (lower is better)
Translates to: GRSMGCHQHRRGSPP*KVGRHRLLLTHLLY
Trigger: GTACAAAAGATGTGTCAGAAGAAGCCTATGTCTGCCTACCTTGCAGGGAGGGCTGCCCCTTCTGTGCTGATGACAGCCCATGCTTCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCACCACCGCCGCTCTCATaGAGGCGCGTTCAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAPPPLS*RRVQKL
Trigger: CAGCTTCTGAACGCGCCTCAATGAGAGCGGCGGTGG...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTGGAGGAGGACAGGTCTaGGAGCAGGATGCGGCTCTC +
Preference number: 5 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIGGGQV*EQDAAL
Trigger: GAGAGCCGCATCCTGCTCCAAGACCTGTCCTCCTCC...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CCA 90 bp AGGGCTTGGAAGGAGATGATGGCAAGTCGTAAATACTTATCTTCCTaGACGAAGCATGGGCTGTCATCAGCACAGAAGGGGCAGCCCTCC +
Preference number: 5 (lower is better)
Translates to: RAWKEMMASRKYLSS*TKHGLSSAQKGQPS
Trigger: GGAGGGCTGCCCCTTCTGTGCTGATGACAGCCCATGCTTCGTCCAGGAAGATAAGTATTTACGACTTGCCATCATCTCCTTCCAAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CCA 90 bp ACACACCTCCCCAATGTCAAAGTTGTCCTTCATCTGGGTGGTGCCTaGGTTCAGGTCAGAATTGGCAGTGGTGGGGTTGACCCTTTGTTG +
Preference number: 5 (lower is better)
Translates to: THLPNVKVVLHLGGA*VQVRIGSGGVDPLL
Trigger: CAACAAAGGGTCAACCCCACCACTGCCAATTCTGACCTGAACCCAGGCACCACCCAGATGAAGGACAACTTTGACATTGGGGAGGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376351.4
ENST00000490549.1
ENST00000650135.1
CDS-3UTR CAA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCATGGTCGGCGCCCTCCTaGTCCTCTTTAGAGCACTGC +
Preference number: 5 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAWSAPS*SSLEHC
Trigger: GCAGTGCTCTAAAGAGGACAAGGAGGGCGCCGACCA...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS GCA 90 bp AGCACACACATTGGCTGCACGAGGCTGACCTCCGTTCTCCTCTTTTaGCCTCTCTGGGAGAACTGGAGTCTTGGAAATCAAAAGCTTCTC +
Preference number: 5 (lower is better)
Translates to: STHIGCTRLTSVLLF*PLWENWSLGNQKLL
Trigger: GAGAAGCTTTTGATTTCCAAGACTCCAGTTCTCCCAGAGAGGGCAAAAGAGGAGAACGGAGGTCAGCCTCGTGCAGCCAATGTGTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376351.4
ENST00000490549.1
ENST00000650135.1
CDS CCA 90 bp CCCGACAGGGATTCCAGTGTGGAATTTTCTGTTGTCTCCTCCTCTTaGCTTTCTGTGGGTAGGCTACTGGACTCTTCCGTTTGGTCTCTC +
Preference number: 5 (lower is better)
Translates to: PDRDSSVEFSVVSSS*LSVGRLLDSSVWSL
Trigger: GAGAGACCAAACGGAAGAGTCCAGTAGCCTACCCACAGAAAGCCAAGAGGAGGAGACAACAGAAAATTCCACACTGGAATCCCTGTCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376351.4
ENST00000490549.1
ENST00000650135.1
CDS-3UTR CAA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGTGGTCGGCGCCCTCCTaGTCCTCTTTAGAGCACTGC +
Preference number: 5 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSWSAPS*SSLEHC
Trigger: GCAGTGCTCTAAAGAGGACAAGGAGGGCGCCGACCA...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CCA 90 bp ATGGCACCCAGTCCAAAGGACTTGAAAATAAGAATGTTTCGAGATTaGCCCCGGGTGGCTAAGCTACCGTCGCAGAAATCAAGTCACCTG +
Preference number: 5 (lower is better)
Translates to: MAPSPKDLKIRMFRD*PRVAKLPSQKSSHL
Trigger: CAGGTGACTTGATTTCTGCGACGGTAGCTTAGCCACCCGGGGCCAATCTCGAAACATTCTTATTTTCAAGTCCTTTGGACTGGGTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376351.4
CDS CCA 90 bp AATTTTCTGTTGTCTCCTCCTCTTGGCTTTCTGTGGGTAGGCTACTaGACTCTTCCGTTTGGTCTCTCACGTGGTCATAAGTGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: NFLLSPPLGFLWVGY*TLPFGLSRGHKCCG
Trigger: CCCACAGCACTTATGACCACGTGAGAGACCAAACGGAAGAGTCCAGTAGCCTACCCACAGAAAGCCAAGAGGAGGAGACAACAGAAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376351.4
ENST00000490549.1
ENST00000650135.1
CDS CCA 90 bp GGTTGTGAGCGCTTGCTGACTTGCACACCAACGGCACCGACTCCGTaGACTCAGCCTCGCTGTCTTCTTTTAGTTTTTGTGTTAGTTTTT +
Preference number: 5 (lower is better)
Translates to: GCERLLTCTPTAPTP*TQPRCLLLVFVLVF
Trigger: AAAAACTAACACAAAAACTAAAAGAAGACAGCGAGGCTGAGTCCACGGAGTCGGTGCCGTTGGTGTGCAAGTCAGCAAGCGCTCACAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376351.4
ENST00000490549.1
ENST00000650135.1
CDS CCA 90 bp ATTGGCTGCACGAGGCTGACCTCCGTTCTCCTCTTTTGCCCTCTCTaGGAGAACTGGAGTCTTGGAAATCAAAAGCTTCTCATCTTCCAA +
Preference number: 5 (lower is better)
Translates to: IGCTRLTSVLLFCPL*ENWSLGNQKLLIFQ
Trigger: TTGGAAGATGAGAAGCTTTTGATTTCCAAGACTCCAGTTCTCCCAGAGAGGGCAAAAGAGGAGAACGGAGGTCAGCCTCGTGCAGCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376351.4
ENST00000490549.1
ENST00000650135.1
CDS-3UTR CAA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTATCACGTTGAGGAAGTaGGTGGCGTGTGTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIITLRK*VACVSV
Trigger: CACACTGACACACGCCACCAACTTCCTCAACGTGAT...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCATTCAGGGTCTCCTCCTaGGATTTCCCTGTGTTCCCT +
Preference number: 5 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAFRVSS*DFPVFP
Trigger: AGGGAACACAGGGAAATCCAAGGAGGAGACCCTGAA...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CCA 90 bp ATTCCAGTGTGGAATTTTCTGTTGTCTCCTCCTCTTGGCTTTCTGTaGGTAGGCTACTGGACTCTTCCGTTTGGTCTCTCACGTGGTCAT +
Preference number: 5 (lower is better)
Translates to: IPVWNFLLSPPLGFL*VGYWTLPFGLSRGH
Trigger: ATGACCACGTGAGAGACCAAACGGAAGAGTCCAGTAGCCTACCCACAGAAAGCCAAGAGGAGGAGACAACAGAAAATTCCACACTGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376351.4
ENST00000490549.1
ENST00000650135.1
CDS-3UTR CAA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGCTCTGCAGCATCACGTaGAGGAAGTTGGTGGCGTGT +
Preference number: 5 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSLCSIT*RKLVAC
Trigger: ACACGCCACCAACTTCCTCAACGTGATGCTGCAGAG...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGTGCTCCCGCGACTTATaGCTCTGCAGCATCACGTTG +
Preference number: 5 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSCSRDL*LCSITL
Trigger: CAACGTGATGCTGCAGAGCAATAAGTCGCGGGAGCA...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTAAGTGGGGCCTCCACTaGCGCCGGAGGCCGTGGAAC +
Preference number: 5 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVKWGLH*RRRPWN
Trigger: GTTCCACGGCCTCCGGCGCAAGTGGAGGCCCCACTT...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTCCCCTTCTCCGAAAGTaGTTCACTGGTAAGACTCCA +
Preference number: 5 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIPLLRK*FTGKTP
Trigger: TGGAGTCTTACCAGTGAACAACTTTCGGAGAAGGGG...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAATGCCCGGATGCTCTTaGCTTTGCGAAAGTGGTAGA +
Preference number: 5 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAMPGCS*LCESGR
Trigger: TCTACCACTTTCGCAAAGCAAAGAGCATCCGGGCAT...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCATCCCCAATGTCAAAGTaGTCCTTCATCTGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: ALGAALLCKWTLHVTCRASPMSK*SFIWVV
Trigger: CACCACCCAGATGAAGGACAACTTTGACATTGGGGA...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTTCTTCCAGCATTTGGTaGAGCTGGGGTCTCAAACTC +
Preference number: 5 (lower is better)
Translates to: LESHCMIMSVGLSRQLRISSSIW*SWGLKL
Trigger: GAGTTTGAGACCCCAGCTCAACCAAATGCTGGAAGA...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCACACTTCTTCCAGCATTaGGTTGAGCTGGGGTCTCAA +
Preference number: 5 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAHFFQH*VELGSQ
Trigger: TTGAGACCCCAGCTCAACCAAATGCTGGAAGAAGTG...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAGGGGGCTGCTTTGCTTaGCAAATGGACCTTACATGT +
Preference number: 5 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAGGCFA*QMDLTC
Trigger: ACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCC...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATGGAGGAGGACAGGTCTaGGAGCAGGATGCGGCTCTC +
Preference number: 5 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDGGGQV*EQDAAL
Trigger: GAGAGCCGCATCCTGCTCCAAGACCTGTCCTCCTCC...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTCACTTGAAGTGGCTCTaGTCCCCGCCGAGCCCGTCC +
Preference number: 5 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVHLKWL*SPPSPS
Trigger: GGACGGGCTCGGCGGGGACAAGAGCCACTTCAAGTG...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTGGTGGGGTTGACCCTTaGTTGTTTCATAATCCCAGA +
Preference number: 5 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIGGVDP*LFHNPR
Trigger: TCTGGGATTATGAAACAACAAAGGGTCAACCCCACC...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCATTGGCAGTGGTGGGGTaGACCCTTTGTTGTTTCATA +
Preference number: 5 (lower is better)
Translates to: ALGAALLCKWTLHVTCRALAVVG*TLCCFI
Trigger: TATGAAACAACAAAGGGTCAACCCCACCACTGCCAA...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTCTTCTACCCATGCCTTaGACTTTACCTCACCATCTG +
Preference number: 5 (lower is better)
Translates to: LESHCMIMSVGLSRQLRILLPMP*TLPHHL
Trigger: CAGATGGTGAGGTAAAGTCAAAGGCATGGGTAGAAG...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAAAACCTCTTTGGGATTaGAGCCCAGCAAGTTCTACC +
Preference number: 5 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAKPLWD*SPASST
Trigger: GGTAGAACTTGCTGGGCTCAAATCCCAAAGAGGTTT...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS TCA 90 bp CATGACCCGTCCGCCAGTCATATATGGAATTCGTTGAGCCGTTCGTaGAAGAAACACCTTCAAAACCCTGTGAAGTTTGAGAGTGACAGT +
Preference number: 5 (lower is better)
Translates to: HDPSASHIWNSLSRS*KKHLQNPVKFESDS
Trigger: ACTGTCACTCTCAAACTTCACAGGGTTTTGAAGGTGTTTCTTTCACGAACGGCTCAACGAATTCCATATATGACTGGCGGACGGGTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTAAAACCAGCCATCACTaGAGCATTGGTCAATGTCCA +
Preference number: 5 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIKTSHH*SIGQCP
Trigger: TGGACATTGACCAATGCTCAAGTGATGGCTGGTTTT...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGCCCCTTCTCCGAAAGTaGTTCACTGGTAAGACTCCA +
Preference number: 5 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSPLLRK*FTGKTP
Trigger: TGGAGTCTTACCAGTGAACAACTTTCGGAGAAGGGG...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGATGCCCGGATGCTCTTaGCTTTGCGAAAGTGGTAGA +
Preference number: 5 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSMPGCS*LCESGR
Trigger: TCTACCACTTTCGCAAAGCAAAGAGCATCCGGGCAT...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCATTCTGGAGGTGGGGGTaGTTTGTGATCATCTTCTTT +
Preference number: 5 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAFWRWG*FVIIFF
Trigger: AAAGAAGATGATCACAAACAACCCCCACCTCCAGAA...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTTTCTGGAGGTGGGGGTaGTTTGTGATCATCTTCTTT +
Preference number: 5 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIFWRWG*FVIIFF
Trigger: AAAGAAGATGATCACAAACAACCCCCACCTCCAGAA...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTGGGAGAACTGGAGTCTaGGAAATCAAAAGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIGRTGV*EIKSFS
Trigger: TGAGAAGCTTTTGATTTCCAAGACTCCAGTTCTCCC...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGCACTTCTTCCAGCATTaGGTTGAGCTGGGGTCTCAA +
Preference number: 5 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSHFFQH*VELGSQ
Trigger: TTGAGACCCCAGCTCAACCAAATGCTGGAAGAAGTG...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAGGTTATAAAACCTCTTaGGGATTTGAGCCCAGCAAG +
Preference number: 5 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAGYKTS*GFEPSK
Trigger: CTTGCTGGGCTCAAATCCCAAAGAGGTTTTATAACC...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTCTCTACGACTCTCGGTaGCTAAATGCTAGAAGTCAA +
Preference number: 5 (lower is better)
Translates to: LESHCMIMSVGLSRQLRILYDSR*LNARSQ
Trigger: TTGACTTCTAGCATTTAGCAACCGAGAGTCGTAGAG...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS GCA 90 bp TCTAATTGTATGGAATATAGCAGAGATGATGAGCTCATTGTGAACTaGAACAGCCATATAGCGGGGCTCATGGAATGCCGATGGGACTGT +
Preference number: 5 (lower is better)
Translates to: SNCMEYSRDDELIVN*NSHIAGLMECRWDC
Trigger: ACAGTCCCATCGGCATTCCATGAGCCCCGCTATATGGCTGTTGCAGTTCACAATGAGCTCATCATCTCTGCTATATTCCATACAATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CCA 90 bp GGAGAACTGGAGTCTTGGAAATCAAAAGCTTCTCATCTTCCAAAATaGACTGGCCTTGGCTCTCCCAAAGGCATACTTCAGCCTTATCTA +
Preference number: 5 (lower is better)
Translates to: GELESWKSKASHLPK*TGLGSPKGILQPYL
Trigger: TAGATAAGGCTGAAGTATGCCTTTGGGAGAGCCAAGGCCAGTCCATTTTGGAAGATGAGAAGCTTTTGATTTCCAAGACTCCAGTTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376351.4
ENST00000490549.1
ENST00000650135.1
CDS-3UTR CAA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTGGGGTTGACCCTTTGTaGTTTCATAATCCCAGATTT +
Preference number: 5 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIGVDPL*FHNPRF
Trigger: AAATCTGGGATTATGAAACAACAAAGGGTCAACCCC...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAGGGGTTGACCCTTTGTaGTTTCATAATCCCAGATTT +
Preference number: 5 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAGVDPL*FHNPRF
Trigger: AAATCTGGGATTATGAAACAACAAAGGGTCAACCCC...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGGGTGGGGTTGACCCTTaGTTGTTTCATAATCCCAGA +
Preference number: 5 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSGGVDP*LFHNPR
Trigger: TCTGGGATTATGAAACAACAAAGGGTCAACCCCACC...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTTTTCATTCTCTGTTTTaGATGCTACAGCTTTGGGGG +
Preference number: 5 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIFHSLF*MLQLWG
Trigger: CCCCCAAAGCTGTAGCATCAAAAACAGAGAATGAAA...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCAGCTCACAATGGCAATTaGCAGGACTTAGACATTTTC +
Preference number: 5 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAAHNGN*QDLDIF
Trigger: GAAAATGTCTAAGTCCTGCAAATTGCCATTGTGAGC...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAAAACCAGCCATCACTaGAGCATTGGTCAATGTCCA +
Preference number: 5 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSKTSHH*SIGQCP
Trigger: TGGACATTGACCAATGCTCAAGTGATGGCTGGTTTT...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTGGGTTCAGGTCAGAATaGGCAGTGGTGGGGTTGACC +
Preference number: 5 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVGFRSE*AVVGLT
Trigger: GGTCAACCCCACCACTGCCAATTCTGACCTGAACCC...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGGGGAGAACTGGAGTCTaGGAAATCAAAAGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSGRTGV*EIKSFS
Trigger: TGAGAAGCTTTTGATTTCCAAGACTCCAGTTCTCCC...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCATTCCTGGTGTCCTATTaGGTTGAGATTTTCATTCTC +
Preference number: 5 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAFLVSY*VEIFIL
Trigger: GAGAATGAAAATCTCAACCAAATAGGACACCAGGAA...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp ATATGCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGGCTGGAAGTTATTACTaGAGTTATAGGAGCCACGCA +
Preference number: 5 (lower is better)
Translates to: ICFGGCFALQMDLTCYMSAGSYY*SYRSHA
Trigger: TGCGTGGCTCCTATAACTCAAGTAATAACTTCCAGC...CGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGCATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATATCACGTTGAGGAAGTaGGTGGCGTGTGTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDITLRK*VACVSV
Trigger: CACACTGACACACGCCACCAACTTCCTCAACGTGAT...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTCTCTGCAGCATCACGTaGAGGAAGTTGGTGGCGTGT +
Preference number: 5 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVLCSIT*RKLVAC
Trigger: ACACGCCACCAACTTCCTCAACGTGATGCTGCAGAG...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTTCATCTCGTGGGTTATaGCTTGAATGTGAAAACTTT +
Preference number: 5 (lower is better)
Translates to: LESHCMIMSVGLSRQLRISSRGL*LECENF
Trigger: AAAGTTTTCACATTCAAGCAATAACCCACGAGATGA...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATTTCAGGGTCTCCTCCTaGGATTTCCCTGTGTTCCCT +
Preference number: 5 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDFRVSS*DFPVFP
Trigger: AGGGAACACAGGGAAATCCAAGGAGGAGACCCTGAA...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTTTGTCTCTTTATCTTTaGGCAAAGGTTTCTGGGATT +
Preference number: 5 (lower is better)
Translates to: LESHCMIMSVGLSRQLRILSLYL*AKVSGI
Trigger: AATCCCAGAAACCTTTGCCAAAAGATAAAGAGACAA...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATCAAAATGGACTGGCCTaGGCTCTCCCAAAGGCATAC +
Preference number: 5 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDQNGLA*ALPKAY
Trigger: GTATGCCTTTGGGAGAGCCAAGGCCAGTCCATTTTG...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTCCTCCTTGGGAATATTaGATTCTTATATCTTCTGTC +
Preference number: 5 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIPPWEY*ILISSV
Trigger: GACAGAAGATATAAGAATCAAATATTCCCAAGGAGG...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTATACCTTTTCTTTCTTaGCAAATCTGGTACGTCTTC +
Preference number: 5 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIIPFLS*QIWYVF
Trigger: GAAGACGTACCAGATTTGCAAAGAAAGAAAAGGTAT...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp TTGGAATCTCACTGCATGATCATGTCGGTAGGGCTTAGTCGGCAGCTTAGGATTTACAATCTGGAATGCTaGAATATGAGACACAACGAT +
Preference number: 5 (lower is better)
Translates to: LESHCMIMSVGLSRQLRIYNLEC*NMRHND
Trigger: ATCGTTGTGTCTCATATTCAAGCATTCCAGATTGTA...AATCCTAAGCTGCCGACTAAGCCCTACCGACATGATCATGCAGTGAGATTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCATACAATCTGGAATGCTaGAATATGAGACACAACGAT +
Preference number: 5 (lower is better)
Translates to: ALGAALLCKWTLHVTCRAYNLEC*NMRHND
Trigger: ATCGTTGTGTCTCATATTCAAGCATTCCAGATTGTA...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp GCTTTGGGGGCTGCTTTGCTTTGCAAATGGACCTTACATGTTACATGTCGAGCATTGAATAGCTGCAGATaGCATAAATGTGTTGTGTCA +
Preference number: 5 (lower is better)
Translates to: ALGAALLCKWTLHVTCRALNSCR*HKCVVS
Trigger: TGACACAACACATTTATGCAATCTGCAGCTATTCAA...TGCTCGACATGTAACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCCAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTCCAAGAGTCTTCTCCTaGGCGCTTGCTATGACACTG +
Preference number: 5 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVPRVFS*ALAMTL
Trigger: CAGTGTCATAGCAAGCGCCAAGGAGAAGACTCTTGG...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATTCCCCAATGTCAAAGTaGTCCTTCATCTGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDSPMSK*SFIWVV
Trigger: CACCACCCAGATGAAGGACAACTTTGACATTGGGGA...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTCAAAATGGACTGGCCTaGGCTCTCCCAAAGGCATAC +
Preference number: 5 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVQNGLA*ALPKAY
Trigger: GTATGCCTTTGGGAGAGCCAAGGCCAGTCCATTTTG...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATTCTTCCAGCATTTGGTaGAGCTGGGGTCTCAAACTC +
Preference number: 5 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDSSSIW*SWGLKL
Trigger: GAGTTTGAGACCCCAGCTCAACCAAATGCTGGAAGA...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATGGGGGCTGCTTTGCTTaGCAAATGGACCTTACATGT +
Preference number: 5 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDGGCFA*QMDLTC
Trigger: ACATGTAAGGTCCATTTGCAAAGCAAAGCAGCCCCC...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTGTGCTGTGGGATTTCTaGAGTGAGAAGACTCGGTTT +
Preference number: 5 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVVLWDF*SEKTRF
Trigger: AAACCGAGTCTTCTCACTCAAGAAATCCCACAGCAC...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTTTGGCAGTGGTGGGGTaGACCCTTTGTTGTTTCATA +
Preference number: 5 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVLAVVG*TLCCFI
Trigger: TATGAAACAACAAAGGGTCAACCCCACCACTGCCAA...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATGCTGGAAGTTATTACTaGAGTTATAGGAGCCACGCA +
Preference number: 5 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDAGSYY*SYRSHA
Trigger: TGCGTGGCTCCTATAACTCAAGTAATAACTTCCAGC...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTCTTCTACCCATGCCTTaGACTTTACCTCACCATCTG +
Preference number: 5 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVLLPMP*TLPHHL
Trigger: CAGATGGTGAGGTAAAGTCAAAGGCATGGGTAGAAG...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATGGTTATAAAACCTCTTaGGGATTTGAGCCCAGCAAG +
Preference number: 5 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDGYKTS*GFEPSK
Trigger: CTTGCTGGGCTCAAATCCCAAAGAGGTTTTATAACC...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTTCCCATGGATACATATaGATCAGGGCAGACATTGTG +
Preference number: 5 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVSHGYI*IRADIV
Trigger: CACAATGTCTGCCCTGATCAATATGTATCCATGGGA...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATGCTCACAATGGCAATTaGCAGGACTTAGACATTTTC +
Preference number: 5 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDAHNGN*QDLDIF
Trigger: GAAAATGTCTAAGTCCTGCAAATTGCCATTGTGAGC...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTCTCTACGACTCTCGGTaGCTAAATGCTAGAAGTCAA +
Preference number: 5 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVLYDSR*LNARSQ
Trigger: TTGACTTCTAGCATTTAGCAACCGAGAGTCGTAGAG...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATACACTTACAGCTTTATaGACTCTACGACTCTCGGTT +
Preference number: 5 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDTLTAL*TLRLSV
Trigger: AACCGAGAGTCGTAGAGTCAATAAAGCTGTAAGTGT...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTTTTCATTCTCTGTTTTaGATGCTACAGCTTTGGGGG +
Preference number: 5 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVFHSLF*MLQLWG
Trigger: CCCCCAAAGCTGTAGCATCAAAAACAGAGAATGAAA...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTACACTTACAGCTTTATaGACTCTACGACTCTCGGTT +
Preference number: 5 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVTLTAL*TLRLSV
Trigger: AACCGAGAGTCGTAGAGTCAATAAAGCTGTAAGTGT...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATTCATCTCGTGGGTTATaGCTTGAATGTGAAAACTTT +
Preference number: 5 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDSSRGL*LECENF
Trigger: AAAGTTTTCACATTCAAGCAATAACCCACGAGATGA...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATTTGTCTCTTTATCTTTaGGCAAAGGTTTCTGGGATT +
Preference number: 5 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDLSLYL*AKVSGI
Trigger: AATCCCAGAAACCTTTGCCAAAAGATAAAGAGACAA...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp TCACCATCTGTCATGTTTTCCTTGATTGACAAATCCTCCTTGGGAATATTTGATCCTCCTTGGGAATATTaGATTCTTATATCTTCTGTC +
Preference number: 5 (lower is better)
Translates to: SPSVMFSLIDKSSLGIFDPPWEY*ILISSV
Trigger: GACAGAAGATATAAGAATCAAATATTCCCAAGGAGG...ATCAAATATTCCCAAGGAGGATTTGTCAATCAAGGAAAACATGACAGATGGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTTCTGTCATGTTTTCCTaGATTGACAAATCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVSVMFS*IDKSSL
Trigger: CAAGGAGGATTTGTCAATCAAGGAAAACATGACAGA...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS-3UTR CAA 90 bp GACAACCTAGCAAATGTTTGCGACCTTAAAAGTGTTTATTCACTTTCTATGGTTTTGAATAGCTGCAGATaGCATAAATGTGTTGTGTCA +
Preference number: 5 (lower is better)
Translates to: DNLANVCDLKSVYSLSMVLNSCR*HKCVVS
Trigger: TGACACAACACATTTATGCAATCTGCAGCTATTCAA...AACCATAGAAAGTGAATAAACACTTTTAAGGTCGCAAACATTTGCTAGGTTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CCA 72 bp GCAGCGCTGGCCGTGCCCGCTGCGCGAGGGGCCGGCTaGGGATTACGCACCTCGCAGCCTGGAGCCGAGCGG +
Preference number: 6 (lower is better)
Translates to: AALAVPAARGAG*GLRTSQPGAER
Trigger: CCGCTCGGCTCCAGGCTGCGAGGTGCGTAATCCCCAGCCGGCCCCTCGCGCAGCGGGCACGGCCAGCGCTGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376351.4
CDS CCA 72 bp TCTCACCCGCCGCAGGTCGTTCCCGCCTCCCGGCACTaGCTCCTCCTCGACCGCTTCGCCCGGAGGCGCGGG +
Preference number: 6 (lower is better)
Translates to: SHPPQVVPASRH*LLLDRFARRRG
Trigger: CCCGCGCCTCCGGGCGAAGCGGTCGAGGAGGAGCCAGTGCCGGGAGGCGGGAACGACCTGCGGCGGGTGAGA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650135.1
CDS CAA 90 bp GCCCGAGTCCGTCTCTCGGCCCGGCTGCCGCCACCGCCGCTCTCATaGAGGCGCGTTCAGAAGCTGCTGCTGCTGCTGCCGCCGCGGCCG +
Preference number: 6 (lower is better)
Translates to: ARVRLSARLPPPPLS*RRVQKLLLLLPPRP
Trigger: CGGCCGCGGCGGCAGCAGCAGCAGCAGCTTCTGAACGCGCCTCAATGAGAGCGGCGGTGGCGGCAGCCGGGCCGAGAGACGGACTCGGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS GCA 72 bp GGAGCCGAGGAGTCCGAGGCAGAGGCTCGACCCGGCTaGTGGGCGTGCGGCTTCCCCTTCGGGGTCCTCTCT +
Preference number: 6 (lower is better)
Translates to: GAEESEAEARPG*WACGFPFGVLS
Trigger: AGAGAGGACCCCGAAGGGGAAGCCGCACGCCCAGCAGCCGGGTCGAGCCTCTGCCTCGGACTCCTCGGCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CCA 72 bp GCGAGGGGCCGGCTGGGGATTACGCACCTCGCAGCCTaGAGCCGAGCGGGTTACATGGCCTCGCGCTCCCAG +
Preference number: 6 (lower is better)
Translates to: ARGRLGITHLAA*SRAGYMASRSQ
Trigger: CTGGGAGCGCGAGGCCATGTAACCCGCTCGGCTCCAGGCTGCGAGGTGCGTAATCCCCAGCCGGCCCCTCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376351.4
CDS CCA 72 bp GCCGAGGAGTCCGAGGCAGAGGCTCGACCCGGCTGCTaGGCGTGCGGCTTCCCCTTCGGGGTCCTCTCTCGA +
Preference number: 6 (lower is better)
Translates to: AEESEAEARPGC*ACGFPFGVLSR
Trigger: TCGAGAGAGGACCCCGAAGGGGAAGCCGCACGCCCAGCAGCCGGGTCGAGCCTCTGCCTCGGACTCCTCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS TCA 72 bp GTCTCTCGGCCCGGCTGCCGCCACCGCCGCTCTCATTaGGGCGCGTTCAGAAGCTGCTGCTGCTGCTGCCGC +
Preference number: 6 (lower is better)
Translates to: VSRPGCRHRRSH*GAFRSCCCCCR
Trigger: GCGGCAGCAGCAGCAGCAGCTTCTGAACGCGCCTCAATGAGAGCGGCGGTGGCGGCAGCCGGGCCGAGAGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CCA 72 bp GCGTTGGCCAGGTGGGGTGCGGAGGAGGACAGGTCTTaGAGCAGGATGCGGCTCTCCTCGCGCGTGGCCTGG +
Preference number: 6 (lower is better)
Translates to: ALARWGAEEDRS*SRMRLSSRVAW
Trigger: CCAGGCCACGCGCGAGGAGAGCCGCATCCTGCTCCAAGACCTGTCCTCCTCCGCACCCCACCTGGCCAACGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CCA 72 bp CTCGAGGGGAATCCGGCCGTCCTTGGGGGTCGCGGCTaGCGCCAACAGCTCCCAATCCCAGCTCGCAGCCTG +
Preference number: 6 (lower is better)
Translates to: LEGNPAVLGGRG*RQQLPIPARSL
Trigger: CAGGCTGCGAGCTGGGATTGGGAGCTGTTGGCGCCAGCCGCGACCCCCAAGGACGGCCGGATTCCCCTCGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650135.1
CDS CAA 72 bp CGTCTCTCGGCCCGGCTGCCGCCACCGCCGCTCTCATaGAGGCGCGTTCAGAAGCTGCTGCTGCTGCTGCCG +
Preference number: 6 (lower is better)
Translates to: RLSARLPPPPLS*RRVQKLLLLLP
Trigger: CGGCAGCAGCAGCAGCAGCTTCTGAACGCGCCTCAATGAGAGCGGCGGTGGCGGCAGCCGGGCCGAGAGACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS GCA 72 bp AATCAAGTCACCTGTGGCAGCGCTGGCCGTGCCCGCTaGGCGAGGGGCCGGCTGGGGATTACGCACCTCGCA +
Preference number: 6 (lower is better)
Translates to: NQVTCGSAGRAR*ARGRLGITHLA
Trigger: TGCGAGGTGCGTAATCCCCAGCCGGCCCCTCGCGCAGCGGGCACGGCCAGCGCTGCCACAGGTGACTTGATT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376351.4
CDS GCA 72 bp GATTGGGGCCGCGGCGGTGTAAGTGGGGCCTCCACTTaGGCCGGAGGCCGTGGAACCACTCGGTCTCCAGAG +
Preference number: 6 (lower is better)
Translates to: DWGRGGVSGAST*AGGRGTTRSPE
Trigger: CTCTGGAGACCGAGTGGTTCCACGGCCTCCGGCGCAAGTGGAGGCCCCACTTACACCGCCGCGGCCCCAATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CCA 72 bp TTACGCACCTCGCAGCCTGGAGCCGAGCGGGTTACATaGCCTCGCGCTCCCAGCGGCTGGAGTCAGCCCGAG +
Preference number: 6 (lower is better)
Translates to: LRTSQPGAERVT*PRAPSGWSQPE
Trigger: CTCGGGCTGACTCCAGCCGCTGGGAGCGCGAGGCCATGTAACCCGCTCGGCTCCAGGCTGCGAGGTGCGTAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376351.4
CDS CCA 72 bp CTACCGTCGCAGAAATCAAGTCACCTGTGGCAGCGCTaGCCGTGCCCGCTGCGCGAGGGGCCGGCTGGGGAT +
Preference number: 6 (lower is better)
Translates to: LPSQKSSHLWQR*PCPLREGPAGD
Trigger: ATCCCCAGCCGGCCCCTCGCGCAGCGGGCACGGCCAGCGCTGCCACAGGTGACTTGATTTCTGCGACGGTAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376351.4
CDS CCA 72 bp CCGGCAGGCCCGCCAACTCGTAGCGGCCGGAGCAGTTaGCTCGCTTCAGCTGGTGGGAGTCCCCGGTGTAGA +
Preference number: 6 (lower is better)
Translates to: PAGPPTRSGRSS*LASAGGSPRCR
Trigger: TCTACACCGGGGACTCCCACCAGCTGAAGCGAGCCAACTGCTCCGGCCGCTACGAGTTGGCGGGCCTGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CCA 72 bp AATCCCAGCTCGCAGCCTGGAGCCGAGCGGGTTACATaGCCTCGCGCTCCCAGCGGCTGGAGTCAGCCCGAG +
Preference number: 6 (lower is better)
Translates to: NPSSQPGAERVT*PRAPSGWSQPE
Trigger: CTCGGGCTGACTCCAGCCGCTGGGAGCGCGAGGCCATGTAACCCGCTCGGCTCCAGGCTGCGAGCTGGGATT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650135.1
CDS CAA 90 bp CTCCAGAGTGGCGTTGGCCAGGTGGGGTGCGGAGGAGGACAGGTCTaGGAGCAGGATGCGGCTCTCCTCGCGCGTGGCCTGGAGGAAGAC +
Preference number: 6 (lower is better)
Translates to: LQSGVGQVGCGGGQV*EQDAALLARGLEED
Trigger: GTCTTCCTCCAGGCCACGCGCGAGGAGAGCCGCATCCTGCTCCAAGACCTGTCCTCCTCCGCACCCCACCTGGCCAACGCCACTCTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS GCA 72 bp TCGCAGAAATCAAGTCACCTGTGGCAGCGCTGGCCGTaGCCGCTGCGCGAGGGGCCGGCTGGGGATTACGCA +
Preference number: 6 (lower is better)
Translates to: SQKSSHLWQRWP*PLREGPAGDYA
Trigger: TGCGTAATCCCCAGCCGGCCCCTCGCGCAGCGGGCACGGCCAGCGCTGCCACAGGTGACTTGATTTCTGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376351.4
CDS CCA 72 bp GTGGCTAAGCTACCGTCGCAGAAATCAAGTCACCTGTaGCAGCGCTGGCCGTGCCCGCTGCGCGAGGGGCCG +
Preference number: 6 (lower is better)
Translates to: VAKLPSQKSSHL*QRWPCPLREGP
Trigger: CGGCCCCTCGCGCAGCGGGCACGGCCAGCGCTGCCACAGGTGACTTGATTTCTGCGACGGTAGCTTAGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376351.4
CDS CCA 72 bp CCTCGGCGAGTTTCTGCGCCAAGATGGTGCCATCGGTaGAGCGGCTCCAGGGAGCCGAGGAGTCCGAGGCAG +
Preference number: 6 (lower is better)
Translates to: PRRVSAPRWCHR*SGSREPRSPRQ
Trigger: CTGCCTCGGACTCCTCGGCTCCCTGGAGCCGCTCCACCGATGGCACCATCTTGGCGCAGAAACTCGCCGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CCA 72 bp CCATGGGCACCTCCTCGGCGAGTTTCTGCGCCAAGATaGTGCCATCGGTGGAGCGGCTCCAGGGAGCCGAGG +
Preference number: 6 (lower is better)
Translates to: PWAPPRRVSAPR*CHRWSGSREPR
Trigger: CCTCGGCTCCCTGGAGCCGCTCCACCGATGGCACCATCTTGGCGCAGAAACTCGCCGAGGAGGTGCCCATGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CCA 72 bp ACAGGTCTTGGAGCAGGATGCGGCTCTCCTCGCGCGTaGCCTGGAGGAAGACCTGTGGGGCCGGTGCGGACA +
Preference number: 6 (lower is better)
Translates to: TGLGAGCGSPRA*PGGRPVGPVRT
Trigger: TGTCCGCACCGGCCCCACAGGTCTTCCTCCAGGCCACGCGCGAGGAGAGCCGCATCCTGCTCCAAGACCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CAA 72 bp CGGAGGCCGTGGAACCACTCGGTCTCCAGAGTGGCGTaGGCCAGGTGGGGTGCGGAGGAGGACAGGTCTTGG +
Preference number: 6 (lower is better)
Translates to: RRPWNHSVSRVA*ARWGAEEDRSW
Trigger: CCAAGACCTGTCCTCCTCCGCACCCCACCTGGCCAACGCCACTCTGGAGACCGAGTGGTTCCACGGCCTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CAA 90 bp CACTTGCGCCGGAGGCCGTGGAACCACTCGGTCTCCAGAGTGGCGTaGGCCAGGTGGGGTGCGGAGGAGGACAGGTCTTGGAGCAGGATG +
Preference number: 6 (lower is better)
Translates to: HLRRRPWNHSVSRVA*ARWGAEEDRSWSRM
Trigger: CATCCTGCTCCAAGACCTGTCCTCCTCCGCACCCCACCTGGCCAACGCCACTCTGGAGACCGAGTGGTTCCACGGCCTCCGGCGCAAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS GCA 72 bp GAGGCCACGTCCATGGGCACCTCCTCGGCGAGTTTCTaGGCCAAGATGGTGCCATCGGTGGAGCGGCTCCAG +
Preference number: 6 (lower is better)
Translates to: EATSMGTSSASF*AKMVPSVERLQ
Trigger: CTGGAGCCGCTCCACCGATGGCACCATCTTGGCGCAGAAACTCGCCGAGGAGGTGCCCATGGACGTGGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CCA 72 bp GGGAGTCCCCGGTGTAGAGGTAAGAGGCCACGTCCATaGGCACCTCCTCGGCGAGTTTCTGCGCCAAGATGG +
Preference number: 6 (lower is better)
Translates to: GSPRCRGKRPRP*APPRRVSAPRW
Trigger: CCATCTTGGCGCAGAAACTCGCCGAGGAGGTGCCCATGGACGTGGCCTCTTACCTCTACACCGGGGACTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CCA 72 bp CTGGGCTCGCCCTCCAGAAGGCTCCACACCAGCGCCTaGTACCAATCCAGGTCGTCCTGCAAGTTCTGCTCC +
Preference number: 6 (lower is better)
Translates to: LGSPSRRLHTSA*YQSRSSCKFCS
Trigger: GGAGCAGAACTTGCAGGACGACCTGGATTGGTACCAGGCGCTGGTGTGGAGCCTTCTGGAGGGCGAGCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CCA 72 bp TGGAACCACTCGGTCTCCAGAGTGGCGTTGGCCAGGTaGGGTGCGGAGGAGGACAGGTCTTGGAGCAGGATG +
Preference number: 6 (lower is better)
Translates to: WNHSVSRVALAR*GAEEDRSWSRM
Trigger: CATCCTGCTCCAAGACCTGTCCTCCTCCGCACCCCACCTGGCCAACGCCACTCTGGAGACCGAGTGGTTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS TCA 72 bp TCCCGTTCTCGCACTCCAGATAAGGCGGAGACCACTTaGAGTGGCTCTTGTCCCCGCCGAGCCCGTCCTTGC +
Preference number: 6 (lower is better)
Translates to: SRSRTPDKAETT*SGSCPRRARPC
Trigger: GCAAGGACGGGCTCGGCGGGGACAAGAGCCACTTCAAGTGGTCTCCGCCTTATCTGGAGTGCGAGAACGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CAA 72 bp GCAGTGCCTTTGGCTGTGCCATGGTCGGCGCCCTCCTaGTCCTCTTTAGAGCACTGCCGGCTGACTGTCTCT +
Preference number: 6 (lower is better)
Translates to: AVPLAVPWSAPS*SSLEHCRLTVS
Trigger: AGAGACAGTCAGCCGGCAGTGCTCTAAAGAGGACAAGGAGGGCGCCGACCATGGCACAGCCAAAGGCACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376351.4
ENST00000490549.1
ENST00000650135.1
CDS TCA 72 bp TCGCTCTGCCCAGCACACACATTGGCTGCACGAGGCTaGCCTCCGTTCTCCTCTTTTGCCCTCTCTGGGAGA +
Preference number: 6 (lower is better)
Translates to: SLCPAHTLAARG*PPFSSFALSGR
Trigger: TCTCCCAGAGAGGGCAAAAGAGGAGAACGGAGGTCAGCCTCGTGCAGCCAATGTGTGTGCTGGGCAGAGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376351.4
ENST00000490549.1
ENST00000650135.1
CDS GCA 72 bp CTCCACACCAGCGCCTGGTACCAATCCAGGTCGTCCTaGAAGTTCTGCTCCCGCGACTTATTGCTCTGCAGC +
Preference number: 6 (lower is better)
Translates to: LHTSAWYQSRSS*KFCSRDLLLCS
Trigger: GCTGCAGAGCAATAAGTCGCGGGAGCAGAACTTGCAGGACGACCTGGATTGGTACCAGGCGCTGGTGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS GCA 72 bp CCATGGTCGGCGCCCTCCTTGTCCTCTTTAGAGCACTaGCGGCTGACTGTCTCTGGGATCTCCGTAATGCGT +
Preference number: 6 (lower is better)
Translates to: PWSAPSLSSLEH*RLTVSGISVMR
Trigger: ACGCATTACGGAGATCCCAGAGACAGTCAGCCGGCAGTGCTCTAAAGAGGACAAGGAGGGCGCCGACCATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376351.4
ENST00000490549.1
ENST00000650135.1
CDS GCA 72 bp GGGCAGTTCTTCGCTCTGCCCAGCACACACATTGGCTaGACGAGGCTGACCTCCGTTCTCCTCTTTTGCCCT +
Preference number: 6 (lower is better)
Translates to: GQFFALPSTHIG*TRLTSVLLFCP
Trigger: AGGGCAAAAGAGGAGAACGGAGGTCAGCCTCGTGCAGCCAATGTGTGTGCTGGGCAGAGCGAAGAACTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376351.4
ENST00000490549.1
ENST00000650135.1
CDS CAA 90 bp TCCTGCAAGTTCTGCTCCCGCGACTTATTGCTCTGCAGCATCACGTaGAGGAAGTTGGTGGCGTGTGTCAGTGTGTCCAGCGCCCGGTGC +
Preference number: 6 (lower is better)
Translates to: SCKFCSRDLLLCSIT*RKLVACVSVSSARC
Trigger: GCACCGGGCGCTGGACACACTGACACACGCCACCAACTTCCTCAACGTGATGCTGCAGAGCAATAAGTCGCGGGAGCAGAACTTGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS TCA 72 bp CGTGGGTGCCCAGTTTTCTTCTCTGAGCTGAGGTTGTaGGCGCTTGCTGACTTGCACACCAACGGCACCGAC +
Preference number: 6 (lower is better)
Translates to: RGCPVFFSELRL*ALADLHTNGTD
Trigger: GTCGGTGCCGTTGGTGTGCAAGTCAGCAAGCGCTCACAACCTCAGCTCAGAGAAGAAAACTGGGCACCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376351.4
ENST00000490549.1
ENST00000650135.1
CDS GCA 72 bp AGCGCCTGGTACCAATCCAGGTCGTCCTGCAAGTTCTaGTCCCGCGACTTATTGCTCTGCAGCATCACGTTG +
Preference number: 6 (lower is better)
Translates to: SAWYQSRSSCKF*SRDLLLCSITL
Trigger: CAACGTGATGCTGCAGAGCAATAAGTCGCGGGAGCAGAACTTGCAGGACGACCTGGATTGGTACCAGGCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CAA 72 bp TCCAGGTCGTCCTGCAAGTTCTGCTCCCGCGACTTATaGCTCTGCAGCATCACGTTGAGGAAGTTGGTGGCG +
Preference number: 6 (lower is better)
Translates to: SRSSCKFCSRDL*LCSITLRKLVA
Trigger: CGCCACCAACTTCCTCAACGTGATGCTGCAGAGCAATAAGTCGCGGGAGCAGAACTTGCAGGACGACCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS GCA 72 bp TCGTCCTGCAAGTTCTGCTCCCGCGACTTATTGCTCTaGAGCATCACGTTGAGGAAGTTGGTGGCGTGTGTC +
Preference number: 6 (lower is better)
Translates to: SSCKFCSRDLLL*SITLRKLVACV
Trigger: GACACACGCCACCAACTTCCTCAACGTGATGCTGCAGAGCAATAAGTCGCGGGAGCAGAACTTGCAGGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS GCA 72 bp ATGGGCTGTCATCAGCACAGAAGGGGCAGCCCTCCCTaGAAGGTAGGCAGACATAGGCTTCTTCTGACACAT +
Preference number: 6 (lower is better)
Translates to: MGCHQHRRGSPP*KVGRHRLLLTH
Trigger: ATGTGTCAGAAGAAGCCTATGTCTGCCTACCTTGCAGGGAGGGCTGCCCCTTCTGTGCTGATGACAGCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CAA 72 bp TTCTGCTCCCGCGACTTATTGCTCTGCAGCATCACGTaGAGGAAGTTGGTGGCGTGTGTCAGTGTGTCCAGC +
Preference number: 6 (lower is better)
Translates to: FCSRDLLLCSIT*RKLVACVSVSS
Trigger: GCTGGACACACTGACACACGCCACCAACTTCCTCAACGTGATGCTGCAGAGCAATAAGTCGCGGGAGCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CAA 90 bp TGGTACCAATCCAGGTCGTCCTGCAAGTTCTGCTCCCGCGACTTATaGCTCTGCAGCATCACGTTGAGGAAGTTGGTGGCGTGTGTCAGT +
Preference number: 6 (lower is better)
Translates to: WYQSRSSCKFCSRDL*LCSITLRKLVACVS
Trigger: ACTGACACACGCCACCAACTTCCTCAACGTGATGCTGCAGAGCAATAAGTCGCGGGAGCAGAACTTGCAGGACGACCTGGATTGGTACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS GCA 72 bp GTGAACTGCAACAGCCATATAGCGGGGCTCATGGAATaGCGATGGGACTGTCCGCACTGCATAGCAGAGATA +
Preference number: 6 (lower is better)
Translates to: VNCNSHIAGLME*RWDCPHCIAEI
Trigger: TATCTCTGCTATGCAGTGCGGACAGTCCCATCGGCATTCCATGAGCCCCGCTATATGGCTGTTGCAGTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CCA 72 bp CTTGTCCTCTTTAGAGCACTGCCGGCTGACTGTCTCTaGGATCTCCGTAATGCGTCTCATGATGGAACGACC +
Preference number: 6 (lower is better)
Translates to: LVLFRALPADCL*DLRNASHDGTT
Trigger: GGTCGTTCCATCATGAGACGCATTACGGAGATCCCAGAGACAGTCAGCCGGCAGTGCTCTAAAGAGGACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376351.4
ENST00000490549.1
ENST00000650135.1
CDS CCA 72 bp CGCTTGCTGACTTGCACACCAACGGCACCGACTCCGTaGACTCAGCCTCGCTGTCTTCTTTTAGTTTTTGTG +
Preference number: 6 (lower is better)
Translates to: RLLTCTPTAPTP*TQPRCLLLVFV
Trigger: CACAAAAACTAAAAGAAGACAGCGAGGCTGAGTCCACGGAGTCGGTGCCGTTGGTGTGCAAGTCAGCAAGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376351.4
ENST00000490549.1
ENST00000650135.1
CDS GCA 72 bp ATTGGCTGCACGAGGCTGACCTCCGTTCTCCTCTTTTaGCCTCTCTGGGAGAACTGGAGTCTTGGAAATCAA +
Preference number: 6 (lower is better)
Translates to: IGCTRLTSVLLF*PLWENWSLGNQ
Trigger: TTGATTTCCAAGACTCCAGTTCTCCCAGAGAGGGCAAAAGAGGAGAACGGAGGTCAGCCTCGTGCAGCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376351.4
ENST00000490549.1
ENST00000650135.1
CDS CAA 90 bp GCCTGGGTTCAGGTCAGAATTGGCAGTGGTGGGGTTGACCCTTTGTaGTTTCATAATCCCAGATTTCTGAGGCTTTCTTGGCTCCTCCGC +
Preference number: 6 (lower is better)
Translates to: AWVQVRIGSGGVDPL*FHNPRFLRLSWLLR
Trigger: GCGGAGGAGCCAAGAAAGCCTCAGAAATCTGGGATTATGAAACAACAAAGGGTCAACCCCACCACTGCCAATTCTGACCTGAACCCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376351.4
ENST00000490549.1
ENST00000650135.1
CDS CAA 90 bp CAGCACACACATTGGCTGCACGAGGCTGACCTCCGTTCTCCTCTTTaGCCCTCTCTGGGAGAACTGGAGTCTTGGAAATCAAAAGCTTCT +
Preference number: 6 (lower is better)
Translates to: QHTHWLHEADLRSPL*PSLGELESWKSKAS
Trigger: AGAAGCTTTTGATTTCCAAGACTCCAGTTCTCCCAGAGAGGGCAAAAGAGGAGAACGGAGGTCAGCCTCGTGCAGCCAATGTGTGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376351.4
ENST00000490549.1
ENST00000650135.1
CDS CAA 90 bp GGTGCCTGGGTTCAGGTCAGAATTGGCAGTGGTGGGGTTGACCCTTaGTTGTTTCATAATCCCAGATTTCTGAGGCTTTCTTGGCTCCTC +
Preference number: 6 (lower is better)
Translates to: GAWVQVRIGSGGVDP*LFHNPRFLRLSWLL
Trigger: GAGGAGCCAAGAAAGCCTCAGAAATCTGGGATTATGAAACAACAAAGGGTCAACCCCACCACTGCCAATTCTGACCTGAACCCAGGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376351.4
ENST00000490549.1
ENST00000650135.1
CDS TCA 72 bp ATGAAACCGTGGACCACAGCGGCGAGGGTTACAGCTTaGTTAGACAAATACACAGACCCAAAGAGTGTGCGG +
Preference number: 6 (lower is better)
Translates to: MKPWTTAARVTA*LDKYTDPKSVR
Trigger: CCGCACACTCTTTGGGTCTGTGTATTTGTCTAATCAAGCTGTAACCCTCGCCGCTGTGGTCCACGGTTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482641.2
CDS CCA 72 bp TTGTCTCCTCCTCTTGGCTTTCTGTGGGTAGGCTACTaGACTCTTCCGTTTGGTCTCTCACGTGGTCATAAG +
Preference number: 6 (lower is better)
Translates to: LSPPLGFLWVGY*TLPFGLSRGHK
Trigger: CTTATGACCACGTGAGAGACCAAACGGAAGAGTCCAGTAGCCTACCCACAGAAAGCCAAGAGGAGGAGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376351.4
ENST00000490549.1
ENST00000650135.1
CDS CAA 72 bp AATGAAACCGTGGACCACAGCGGCGAGGGTTACAGCTaGATTAGACAAATACACAGACCCAAAGAGTGTGCG +
Preference number: 6 (lower is better)
Translates to: NETVDHSGEGYS*IRQIHRPKECA
Trigger: CGCACACTCTTTGGGTCTGTGTATTTGTCTAATCAAGCTGTAACCCTCGCCGCTGTGGTCCACGGTTTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482641.2
CDS TCA 72 bp CTCATGACCCGTCCGCCAGTCATATATGGAATTCGTTaGGCCGTTCGTGAAAGAAACACCTTCAAAACCCTG +
Preference number: 6 (lower is better)
Translates to: LMTRPPVIYGIR*AVRERNTFKTL
Trigger: CAGGGTTTTGAAGGTGTTTCTTTCACGAACGGCTCAACGAATTCCATATATGACTGGCGGACGGGTCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS GCA 72 bp CTTGGCTCTCCCAAAGGCATACTTCAGCCTTATCTATaGGCTTCTGATTGGATTGCTGACAAACCTCAGCTG +
Preference number: 6 (lower is better)
Translates to: LGSPKGILQPYL*ASDWIADKPQL
Trigger: CAGCTGAGGTTTGTCAGCAATCCAATCAGAAGCGCATAGATAAGGCTGAAGTATGCCTTTGGGAGAGCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376351.4
ENST00000490549.1
ENST00000650135.1
CDS CCA 72 bp AAGGAGATGATGGCAAGTCGTAAATACTTATCTTCCTaGACGAAGCATGGGCTGTCATCAGCACAGAAGGGG +
Preference number: 6 (lower is better)
Translates to: KEMMASRKYLSS*TKHGLSSAQKG
Trigger: CCCCTTCTGTGCTGATGACAGCCCATGCTTCGTCCAGGAAGATAAGTATTTACGACTTGCCATCATCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CCA 72 bp TGGAATTTTCTGTTGTCTCCTCCTCTTGGCTTTCTGTaGGTAGGCTACTGGACTCTTCCGTTTGGTCTCTCA +
Preference number: 6 (lower is better)
Translates to: WNFLLSPPLGFL*VGYWTLPFGLS
Trigger: TGAGAGACCAAACGGAAGAGTCCAGTAGCCTACCCACAGAAAGCCAAGAGGAGGAGACAACAGAAAATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376351.4
ENST00000490549.1
ENST00000650135.1
CDS CAA 90 bp ACACCTGCTGTTTGGGTTTTCCCAGCTAATCCAAGAGTCTTCTCCTaGGCGCTTGCTATGACACTGAGAGACTTCTGTAACATCGATGTT +
Preference number: 6 (lower is better)
Translates to: TPAVWVFPANPRVFS*ALAMTLRDFCNIDV
Trigger: AACATCGATGTTACAGAAGTCTCTCAGTGTCATAGCAAGCGCCAAGGAGAAGACTCTTGGATTAGCTGGGAAAACCCAAACAGCAGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376351.4
ENST00000490549.1
ENST00000650135.1
CDS TCA 72 bp TCCCAGCGGTCAATGAGGCACATATTGAAGATGAGGTaGTCGGATGTTTTCCCCTGGCCAATAAGTGAAATC +
Preference number: 6 (lower is better)
Translates to: SQRSMRHILKMR*SDVFPWPISEI
Trigger: GATTTCACTTATTGGCCAGGGGAAAACATCCGATCACCTCATCTTCAATATGTGCCTCATTGACCGCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS GCA 72 bp GCCAATGAGAAACCAAAACACTACCAAGAGTATTACTaGCAGCATCCTCATGACCCGTCCGCCAGTCATATA +
Preference number: 6 (lower is better)
Translates to: ANEKPKHYQEYY*QHPHDPSASHI
Trigger: TATATGACTGGCGGACGGGTCATGAGGATGCTGGCAGTAATACTCTTGGTAGTGTTTTGGTTTCTCATTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CCA 72 bp AGTCCAAAGGACTTGAAAATAAGAATGTTTCGAGATTaGCCCCGGGTGGCTAAGCTACCGTCGCAGAAATCA +
Preference number: 6 (lower is better)
Translates to: SPKDLKIRMFRD*PRVAKLPSQKS
Trigger: TGATTTCTGCGACGGTAGCTTAGCCACCCGGGGCCAATCTCGAAACATTCTTATTTTCAAGTCCTTTGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376351.4
CDS CAA 90 bp AGTCTTGGAAATCAAAAGCTTCTCATCTTCCAAAATGGACTGGCCTaGGCTCTCCCAAAGGCATACTTCAGCCTTATCTATGCGCTTCTG +
Preference number: 6 (lower is better)
Translates to: SLGNQKLLIFQNGLA*ALPKAYFSLIYALL
Trigger: CAGAAGCGCATAGATAAGGCTGAAGTATGCCTTTGGGAGAGCCAAGGCCAGTCCATTTTGGAAGATGAGAAGCTTTTGATTTCCAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376351.4
ENST00000490549.1
ENST00000650135.1
CDS TCA 72 bp AAAACACTACCAAGAGTATTACTGCCAGCATCCTCATaGCCCGTCCGCCAGTCATATATGGAATTCGTTGAG +
Preference number: 6 (lower is better)
Translates to: KTLPRVLLPASS*PVRQSYMEFVE
Trigger: CTCAACGAATTCCATATATGACTGGCGGACGGGTCATGAGGATGCTGGCAGTAATACTCTTGGTAGTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CCA 72 bp AGCATGCTAACGAAGTCGAGCAGCATACACAGGGCTTaGAAGGAGATGATGGCAAGTCGTAAATACTTATCT +
Preference number: 6 (lower is better)
Translates to: SMLTKSSSIHRA*KEMMASRKYLS
Trigger: AGATAAGTATTTACGACTTGCCATCATCTCCTTCCAAGCCCTGTGTATGCTGCTCGACTTCGTTAGCATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS CAA 72 bp GTTCAGGTCAGAATTGGCAGTGGTGGGGTTGACCCTTaGTTGTTTCATAATCCCAGATTTCTGAGGCTTTCT +
Preference number: 6 (lower is better)
Translates to: VQVRIGSGGVDP*LFHNPRFLRLS
Trigger: AGAAAGCCTCAGAAATCTGGGATTATGAAACAACAAAGGGTCAACCCCACCACTGCCAATTCTGACCTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376351.4
ENST00000490549.1
ENST00000650135.1
CDS TCA 72 bp TCTTCTGACACATCTTTTGTACTTCCTGAAATATGCTaGTCCGGACCCCTTCTCCGAAAGTTGTTCACTGGT +
Preference number: 6 (lower is better)
Translates to: SSDTSFVLPEIC*SGPLLRKLFTG
Trigger: ACCAGTGAACAACTTTCGGAGAAGGGGTCCGGATCAGCATATTTCAGGAAGTACAAAAGATGTGTCAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS TCA 72 bp TCCGCCAGTCATATATGGAATTCGTTGAGCCGTTCGTaGAAGAAACACCTTCAAAACCCTGTGAAGTTTGAG +
Preference number: 6 (lower is better)
Translates to: SASHIWNSLSRS*KKHLQNPVKFE
Trigger: CTCAAACTTCACAGGGTTTTGAAGGTGTTTCTTTCACGAACGGCTCAACGAATTCCATATATGACTGGCGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS GCA 72 bp TCACTGGTAAGACTCCAGGATGATAGAATCCTGCTTTaGAAATGCACTCATAGGCTCCAAGAACGAATCCTA +
Preference number: 6 (lower is better)
Translates to: SLVRLQDDRILL*KCTHRLQERIL
Trigger: TAGGATTCGTTCTTGGAGCCTATGAGTGCATTTGCAAAGCAGGATTCTATCATCCTGGAGTCTTACCAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1
CDS TCA 72 bp AGAAGAAAAGGCTCATTGCATAACTCAGAAGAACAGTaGATATCCACAAAGCCTACTTCCATGGAGTTAGCT +
Preference number: 6 (lower is better)
Translates to: RRKGSLHNSEEQ*ISTKPTSMELA
Trigger: AGCTAACTCCATGGAAGTAGGCTTTGTGGATATTCACTGTTCTTCTGAGTTATGCAATGAGCCTTTTCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482641.2
CDS TCA 72 bp AAAATACAGCATCAACATCCAATCAGACTGAAGTCTTaGGGCAAGAACAAATCTAATTGTATGGAATATAGC +
Preference number: 6 (lower is better)
Translates to: KIQHQHPIRLKS*GKNKSNCMEYS
Trigger: GCTATATTCCATACAATTAGATTTGTTCTTGCCTCAAGACTTCAGTCTGATTGGATGTTGATGCTGTATTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376351.4
ENST00000650135.1