RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPR156 (Homo sapiens)

Ensembl gene IDs: ENSG00000175697

Ensembl transcript IDs: ENST00000461057.1, ENST00000464295.6, ENST00000481907.1, ENST00000495912.5

Found 601 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGCCGCTCTGGGGGCTCCTCTGAGTTCTCCAGATGCCTCTGTCTCTaGGGATCTGAGCCGCCTCTTTCTGGTAGGAGACTCTGGCTGGGG +
Preference number: 1 (lower is better)
Translates to: RRSGGSSEFSRCLCL*GSEPPLSGRRLWLG
Trigger: CCCCAGCCAGAGTCTCCTACCAGAAAGAGGCGGCTCAGATCCCCAGAGACAGAGGCATCTGGAGAACTCAGAGGAGCCCCCAGAGCGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR TCA 90 bp CAGCTCCCCAGCTCCCTTGGGAGGTGCCAGTGTGGCCTTTGGCAGTaGGGAAGTGGAGGCCCGTTTCCTGAGGTGAGGACCCAGGTCTAT +
Preference number: 1 (lower is better)
Translates to: QLPSSLGRCQCGLWQ*GSGGPFPEVRTQVY
Trigger: ATAGACCTGGGTCCTCACCTCAGGAAACGGGCCTCCACTTCCTCACTGCCAAAGGCCACACTGGCACCTCCCAAGGGAGCTGGGGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR GCA 90 bp ATCATTCTGAAAGTCAGAGAGGTGACCCGAAGGCCCCTGAGCAGCTaGCAGGGTGTGGACCGAGGCTACCGCCTGGACGTCCTTGTTCGG +
Preference number: 1 (lower is better)
Translates to: IILKVREVTRRPLSS*QGVDRGYRLDVLVR
Trigger: CCGAACAAGGACGTCCAGGCGGTAGCCTCGGTCCACACCCTGGCAGCTGCTCAGGGGCCTTCGGGTCACCTCTCTGACTTTCAGAATGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR GCA 90 bp AGGACTTGGGGCCCGGCCAGAACCAGAAGGCTGGCGAAGAAAGGCTaGTTTGCTCCCTCTAGCCCCCTCGGGCTCTGTCTGGCTTTGTTT +
Preference number: 1 (lower is better)
Translates to: RTWGPARTRRLAKKG*FAPSSPLGLCLALF
Trigger: AAACAAAGCCAGACAGAGCCCGAGGGGGCTAGAGGGAGCAAAGCAGCCTTTCTTCGCCAGCCTTCTGGTTCTGGCCGGGCCCCAAGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR CCA 90 bp GGGACAGTCAGGACCTCAGGTACATCCGATCCCAGGGGAGAGATCTaGGAAGCCTGCGGGCGCATGGAGATCTGTCTCAGAGAGGAGGGT +
Preference number: 1 (lower is better)
Translates to: GTVRTSGTSDPRGEI*EACGRMEICLREEG
Trigger: ACCCTCCTCTCTGAGACAGATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTCCCCTGGGATCGGATGTACCTGAGGTCCTGACTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR CCA 90 bp GCAATAAGCACAGTGGACCCAGGTGTGCTCTCCCTGTGGCTCTGGTaGTGGCTGAGTTCCTCGCACTCATCCTTCACCAGCTCCCCAGCT +
Preference number: 1 (lower is better)
Translates to: AISTVDPGVLSLWLW*WLSSSHSSFTSSPA
Trigger: AGCTGGGGAGCTGGTGAAGGATGAGTGCGAGGAACTCAGCCACCACCAGAGCCACAGGGAGAGCACACCTGGGTCCACTGTGCTTATTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR GCA 90 bp AGGACCTCAGGTACATCCGATCCCAGGGGAGAGATCTGGGAAGCCTaGGGGCGCATGGAGATCTGTCTCAGAGAGGAGGGTAAAGTGCCA +
Preference number: 1 (lower is better)
Translates to: RTSGTSDPRGEIWEA*GRMEICLREEGKVP
Trigger: TGGCACTTTACCCTCCTCTCTGAGACAGATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTCCCCTGGGATCGGATGTACCTGAGGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR GCA 90 bp CATATGAGGAGGGCCCTGAAGTGCACTGGGAATCCCGGGCAGCCATaGCAGGATCATTCTGAAAGTCAGAGAGGTGACCCGAAGGCCCCT +
Preference number: 1 (lower is better)
Translates to: HMRRALKCTGNPGQP*QDHSESQRGDPKAP
Trigger: AGGGGCCTTCGGGTCACCTCTCTGACTTTCAGAATGATCCTGGCATGGCTGCCCGGGATTCCCAGTGCACTTCAGGGCCCTCCTCATATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR CCA 90 bp TCAGCAATAAGCACAGTGGACCCAGGTGTGCTCTCCCTGTGGCTCTaGTGGTGGCTGAGTTCCTCGCACTCATCCTTCACCAGCTCCCCA +
Preference number: 1 (lower is better)
Translates to: SAISTVDPGVLSLWL*WWLSSSHSSFTSSP
Trigger: TGGGGAGCTGGTGAAGGATGAGTGCGAGGAACTCAGCCACCACCAGAGCCACAGGGAGAGCACACCTGGGTCCACTGTGCTTATTGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR GCA 90 bp TCCCAGGCCCCTCAAGGCTTTGTGCATATGAGGAGGGCCCTGAAGTaGACTGGGAATCCCGGGCAGCCATGCCAGGATCATTCTGAAAGT +
Preference number: 1 (lower is better)
Translates to: SQAPQGFVHMRRALK*TGNPGQPCQDHSES
Trigger: ACTTTCAGAATGATCCTGGCATGGCTGCCCGGGATTCCCAGTGCACTTCAGGGCCCTCCTCATATGCACAAAGCCTTGAGGGGCCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR CCA 90 bp CCGCCTCTTTCTGGTAGGAGACTCTGGCTGGGGTTCATGGGGACTTaGTCTCCTCTTTCTGGACCCAGGCTTTGCTCAGTCCATGGCTTC +
Preference number: 1 (lower is better)
Translates to: PPLSGRRLWLGFMGT*SPLSGPRLCSVHGF
Trigger: GAAGCCATGGACTGAGCAAAGCCTGGGTCCAGAAAGAGGAGACCAAGTCCCCATGAACCCCAGCCAGAGTCTCCTACCAGAAAGAGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR CCA 90 bp GATCTGAGCCGCCTCTTTCTGGTAGGAGACTCTGGCTGGGGTTCATaGGGACTTGGTCTCCTCTTTCTGGACCCAGGCTTTGCTCAGTCC +
Preference number: 1 (lower is better)
Translates to: DLSRLFLVGDSGWGS*GLGLLFLDPGFAQS
Trigger: GGACTGAGCAAAGCCTGGGTCCAGAAAGAGGAGACCAAGTCCCCATGAACCCCAGCCAGAGTCTCCTACCAGAAAGAGGCGGCTCAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR CCA 90 bp GTCTCTGGGGATCTGAGCCGCCTCTTTCTGGTAGGAGACTCTGGCTaGGGTTCATGGGGACTTGGTCTCCTCTTTCTGGACCCAGGCTTT +
Preference number: 1 (lower is better)
Translates to: VSGDLSRLFLVGDSG*GSWGLGLLFLDPGF
Trigger: AAAGCCTGGGTCCAGAAAGAGGAGACCAAGTCCCCATGAACCCCAGCCAGAGTCTCCTACCAGAAAGAGGCGGCTCAGATCCCCAGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR TCA 90 bp GTGCCAGTGTGGCCTTTGGCAGTGAGGAAGTGGAGGCCCGTTTCCTaGGGTGAGGACCCAGGTCTATTATTCTGGACTATAGGGGAGCAC +
Preference number: 1 (lower is better)
Translates to: VPVWPLAVRKWRPVS*GEDPGLLFWTIGEH
Trigger: GTGCTCCCCTATAGTCCAGAATAATAGACCTGGGTCCTCACCTCAGGAAACGGGCCTCCACTTCCTCACTGCCAAAGGCCACACTGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR TCA 90 bp GAGAGGGAAGCCTCAGGGCCCAGGCCCAGATCTTGTAAGACCTCCTaGAGTTTCTCCCTGATTACTGAACTAACCCGTGACCGCCGCTCT +
Preference number: 1 (lower is better)
Translates to: EREASGPRPRSCKTS*SFSLITELTRDRRS
Trigger: AGAGCGGCGGTCACGGGTTAGTTCAGTAATCAGGGAGAAACTTCAGGAGGTCTTACAAGATCTGGGCCTGGGCCCTGAGGCTTCCCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR CCA 90 bp GTACATCCGATCCCAGGGGAGAGATCTGGGAAGCCTGCGGGCGCATaGAGATCTGTCTCAGAGAGGAGGGTAAAGTGCCATAATGGTGGA +
Preference number: 1 (lower is better)
Translates to: VHPIPGERSGKPAGA*RSVSERRVKCHNGG
Trigger: TCCACCATTATGGCACTTTACCCTCCTCTCTGAGACAGATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTCCCCTGGGATCGGATGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR TCA 90 bp GGCAGGTGGGGCAGCCCCCTCTGGGAGGTCATAGGTGCACTCAGCTaGCATCAGCCTCACAATCTTCTCTTTGGCGTTGTTTACTTGTTC +
Preference number: 1 (lower is better)
Translates to: GRWGSPLWEVIGALS*HQPHNLLFGVVYLF
Trigger: GAACAAGTAAACAACGCCAAAGAGAAGATTGTGAGGCTGATGTCAGCTGAGTGCACCTATGACCTCCCAGAGGGGGCTGCCCCACCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR TCA 90 bp TTGTCTCGTCTGCCAAGCGTCACCTGCCATTCCCAGAAGAACACATaGAGCCATGTGTCCCTGGGAAAACCCACCTACTTGAGTCCCAGG +
Preference number: 1 (lower is better)
Translates to: LSRLPSVTCHSQKNT*SHVSLGKPTYLSPR
Trigger: CCTGGGACTCAAGTAGGTGGGTTTTCCCAGGGACACATGGCTTCATGTGTTCTTCTGGGAATGGCAGGTGACGCTTGGCAGACGAGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR CCA 90 bp GATAGAAGAAGCTGTGCTTCCAGGAGGGCCTCATGGTTCAGTGCCTaGAGAGTCCAGGGGTGTCAGCAGCCCCCAAGATTCCATGATAAA +
Preference number: 1 (lower is better)
Translates to: DRRSCASRRASWFSA*RVQGCQQPPRFHDK
Trigger: TTTATCATGGAATCTTGGGGGCTGCTGACACCCCTGGACTCTCCAGGCACTGAACCATGAGGCCCTCCTGGAAGCACAGCTTCTTCTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR TCA 90 bp TCTGTCTGGCTTTGTTTGCTGCCCTCCAGGGTACCTGGTCTGTCTTaGGGATCTGAAGGTAGTGAAGGCTTCCTGGAAGAAGGTCTTCGT +
Preference number: 1 (lower is better)
Translates to: SVWLCLLPSRVPGLS*GSEGSEGFLEEGLR
Trigger: ACGAAGACCTTCTTCCAGGAAGCCTTCACTACCTTCAGATCCTCAAGACAGACCAGGTACCCTGGAGGGCAGCAAACAAAGCCAGACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR GCA 90 bp TTTCACAGTAGGGCCGGTGGCAGCGGCAGAAGAACTCATCTGAGCTaGTGGACTCAGTATCAAAATAGCTGTGTTGAGAAGACAGGGAGG +
Preference number: 1 (lower is better)
Translates to: FHSRAGGSGRRTHLS*WTQYQNSCVEKTGR
Trigger: CCTCCCTGTCTTCTCAACACAGCTATTTTGATACTGAGTCCAGCAGCTCAGATGAGTTCTTCTGCCGCTGCCACCGGCCCTACTGTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR TCA 90 bp AGAAGAACACATGAAGCCATGTGTCCCTGGGAAAACCCACCTACTTaGGTCCCAGGAGCTGTGTGTACATCTCTGTCCAGCAGTGTGATG +
Preference number: 1 (lower is better)
Translates to: RRTHEAMCPWENPPT*VPGAVCTSLSSSVM
Trigger: CATCACACTGCTGGACAGAGATGTACACACAGCTCCTGGGACTCAAGTAGGTGGGTTTTCCCAGGGACACATGGCTTCATGTGTTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR TCA 90 bp GCAGATTTCACAGTAGGGCCGGTGGCAGCGGCAGAAGAACTCATCTaGGCTGCTGGACTCAGTATCAAAATAGCTGTGTTGAGAAGACAG +
Preference number: 1 (lower is better)
Translates to: ADFTVGPVAAAEELI*AAGLSIKIAVLRRQ
Trigger: CTGTCTTCTCAACACAGCTATTTTGATACTGAGTCCAGCAGCTCAGATGAGTTCTTCTGCCGCTGCCACCGGCCCTACTGTGAAATCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR TCA 90 bp AAATTGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTaGCCTCTGTGTCTAGACCAGCTCTGTTGCTTTTCACACCAGCGT +
Preference number: 1 (lower is better)
Translates to: KLALLLWALVQLLLD*PLCLDQLCCFSHQR
Trigger: ACGCTGGTGTGAAAAGCAACAGAGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR GCA 90 bp AAGCCTGCGGGCGCATGGAGATCTGTCTCAGAGAGGAGGGTAAAGTaGCATAATGGTGGAAAGACACCATCAAGAAATAGTGGTGTAGGG +
Preference number: 1 (lower is better)
Translates to: KPAGAWRSVSERRVK*HNGGKTPSRNSGVG
Trigger: CCCTACACCACTATTTCTTGATGGTGTCTTTCCACCATTATGGCACTTTACCCTCCTCTCTGAGACAGATCTCCATGCGCCCGCAGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR CCA 90 bp CTGGTCAAATGCAGGGCACTAATCTGTTCCCCAAAGACCAGAAATTaGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGAC +
Preference number: 1 (lower is better)
Translates to: LVKCRALICSPKTRN*LFSCGPWYSFSWTD
Trigger: GTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCAATTTCTGGTCTTTGGGGAACAGATTAGTGCCCTGCATTTGACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR TCA 90 bp CTACTTGAGTCCCAGGAGCTGTGTGTACATCTCTGTCCAGCAGTGTaGTGTTGCGGGAAACTACCTCATTTCTCTAAGCCTCATAATCCT +
Preference number: 1 (lower is better)
Translates to: LLESQELCVHLCPAV*CCGKLPHFSKPHNP
Trigger: AGGATTATGAGGCTTAGAGAAATGAGGTAGTTTCCCGCAACATCACACTGCTGGACAGAGATGTACACACAGCTCCTGGGACTCAAGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR CCA 90 bp GTCCAGGGTCTCCAGGGTTTCCTATGTCCATTGAGGGAGTGTTTCTaGGATAAGAGGCTTCTTAGGGAGAACACAGAAGAATCTGTTCAA +
Preference number: 1 (lower is better)
Translates to: VQGLQGFLCPLRECF*DKRLLRENTEESVQ
Trigger: TTGAACAGATTCTTCTGTGTTCTCCCTAAGAAGCCTCTTATCCCAGAAACACTCCCTCAATGGACATAGGAAACCCTGGAGACCCTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR TCA 90 bp AGGAGACTTATCTTCCTGGTAGGTCTGTCCACCAAAAGGCCAGTTTaGTGGGTCACAGTCCACACCTCAAGTTCTACAGAAATTTCCCAT +
Preference number: 1 (lower is better)
Translates to: RRLIFLVGLSTKRPV*WVTVHTSSSTEISH
Trigger: ATGGGAAATTTCTGTAGAACTTGAGGTGTGGACTGTGACCCATCAAACTGGCCTTTTGGTGGACAGACCTACCAGGAAGATAAGTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR CCA 90 bp AGATCAAGAAGTACTCAAAGTAACACAGTGAGCCTAGCTGAAACATaGTATGGGCTGGTCAAATGCAGGGCACTAATCTGTTCCCCAAAG +
Preference number: 1 (lower is better)
Translates to: RSRSTQSNTVSLAET*YGLVKCRALICSPK
Trigger: CTTTGGGGAACAGATTAGTGCCCTGCATTTGACCAGCCCATACCATGTTTCAGCTAGGCTCACTGTGTTACTTTGAGTACTTCTTGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR CCA 90 bp AAAGACTCCTCTCGGGAGTCATTTCTCTTTTATTATGGTACCACTTaGACAGCACACACACAGCACAAGAAACTGCAAACCCATGCACAG +
Preference number: 1 (lower is better)
Translates to: KDSSRESFLFYYGTT*TAHTQHKKLQTHAQ
Trigger: CTGTGCATGGGTTTGCAGTTTCTTGTGCTGTGTGTGTGCTGTCCAAGTGGTACCATAATAAAAGAGAAATGACTCCCGAGAGGAGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR TCA 90 bp AGGCTTTGCTCAGTCCATGGCTTCTGGCTACAACCTGAGTCTAAATaGTCAGAAAAGTCTTTTGAGTCAGATATCTTCTCCTCCTTCCCT +
Preference number: 1 (lower is better)
Translates to: RLCSVHGFWLQPESK*SEKSFESDIFSSFP
Trigger: AGGGAAGGAGGAGAAGATATCTGACTCAAAAGACTTTTCTGATCATTTAGACTCAGGTTGTAGCCAGAAGCCATGGACTGAGCAAAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR CCA 90 bp CAGTTTCTGAAAAGACTCCTCTCGGGAGTCATTTCTCTTTTATTATaGTACCACTTGGACAGCACACACACAGCACAAGAAACTGCAAAC +
Preference number: 1 (lower is better)
Translates to: QFLKRLLSGVISLLL*YHLDSTHTAQETAN
Trigger: GTTTGCAGTTTCTTGTGCTGTGTGTGTGCTGTCCAAGTGGTACCATAATAAAAGAGAAATGACTCCCGAGAGGAGTCTTTTCAGAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR CCA 90 bp AGGGGAGAGATCTGGGAAGCCTGCGGGCGCATGGAGATCTGTCTCAGAGAGGAGGCTCCCCAGCTCCCTTaGGAGGTGCCAGTGTGGCCT +
Preference number: 2 (lower is better)
Translates to: RGEIWEACGRMEICLREEAPQLP*EVPVWP
Trigger: AGGCCACACTGGCACCTCCCAAGGGAGCTGGGGAGC...CTCCTCTCTGAGACAGATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR CAA 90 bp CTTGGGGCCCGGCCAGAACCAGAAGGCTGGCGAAGAAAGGCTGCTTaGCTCCCTCTAGCCCCCTCGGGCTCTGTCTGGCTTTGTTTGCTG +
Preference number: 2 (lower is better)
Translates to: LGARPEPEGWRRKAA*LPLAPSGSVWLCLL
Trigger: CAGCAAACAAAGCCAGACAGAGCCCGAGGGGGCTAGAGGGAGCAAAGCAGCCTTTCTTCGCCAGCCTTCTGGTTCTGGCCGGGCCCCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR CAA 90 bp CAGGCAAGTCAGGTGAGGCTTTGGAGAGGCATGGGGCAGCAGGACTaGGGGCCCGGCCAGAACCAGAAGGCTGGCGAAGAAAGGCTGCTT +
Preference number: 2 (lower is better)
Translates to: QASQVRLWRGMGQQD*GPGQNQKAGEERLL
Trigger: AAGCAGCCTTTCTTCGCCAGCCTTCTGGTTCTGGCCGGGCCCCAAGTCCTGCTGCCCCATGCCTCTCCAAAGCCTCACCTGACTTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR GCA 90 bp AGGGGAGAGATCTGGGAAGCCTGCGGGCGCATGGAGATCTGTCTCAGAGAGGAGCAGTGGACCCAGGTGTaGTCTCCCTGTGGCTCTGGT +
Preference number: 2 (lower is better)
Translates to: RGEIWEACGRMEICLREEQWTQV*SPCGSG
Trigger: ACCAGAGCCACAGGGAGAGCACACCTGGGTCCACTG...CTCCTCTCTGAGACAGATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR-3UTR GCA 90 bp ACCAACAGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCAAGGCCCCTGAGCAGCTaGCAGGGTGTGGACCGAGGC +
Preference number: 2 (lower is better)
Translates to: TNRFSHTPTEIAGVCLPARPLSS*QGVDRG
Trigger: GCCTCGGTCCACACCCTGGCAGCTGCTCAGGGGCCT...TGCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCTGTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR CCA 90 bp GACCAACAGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCGACAAGAGGGGGCGGTaGAGAGGGAAGCCTCAGGGC +
Preference number: 2 (lower is better)
Translates to: DQQVLPYPNRNCWCVPPRDKRGR*RGKPQG
Trigger: GCCCTGAGGCTTCCCTCTCCACCGCCCCCTCTTGTC...GCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCTGTTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR TCA 90 bp GAGAGATCTGGGAAGCCTGCGGGCGCATGGAGATCTGTCTCAGAGAGGAGGGTAGGCTCTGGTGGTGGCTaGGTTCCTCGCACTCATCCT +
Preference number: 2 (lower is better)
Translates to: ERSGKPAGAWRSVSERRVGSGGG*VPRTHP
Trigger: AGGATGAGTGCGAGGAACTCAGCCACCACCAGAGCC...TACCCTCCTCTCTGAGACAGATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR-3UTR GCA 90 bp TTCAAATGGAACTTTGGTAGAAGGTACACTGGGACCCAGGGTAGCCCGGCAGCAGCGGGCCCGCTGAGCTaGCCGCCTTCTCCTCACCAT +
Preference number: 2 (lower is better)
Translates to: FKWNFGRRYTGTQGSPAAAGPLS*PPSPHH
Trigger: ATGGTGAGGAGAAGGCGGGCAGCTCAGCGGGCCCGC...TGCTGCCGGGCTACCCTGGGTCCCAGTGTACCTTCTACCAAAGTTCCATTTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR CCA 90 bp CTTGGGGCCCGGCCAGAACCAGAAGGCTGGCGAAGAAAGGCTGCTTTGCTCCCTCCCAACAGAAATTGCTaGTGTGTGCCTCCCCGCAGT +
Preference number: 2 (lower is better)
Translates to: LGARPEPEGWRRKAALLPPNRNC*CVPPRS
Trigger: ACTGCGGGGAGGCACACACCAGCAATTTCTGTTGGG...AGGGAGCAAAGCAGCCTTTCTTCGCCAGCCTTCTGGTTCTGGCCGGGCCCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR CCA 90 bp ACAGTCAGGACCTCAGGTACATCCGATCCCAGGGGAGAGATCTGGGAAGCCTGCGGTGTGCTCTCCCTGTaGCTCTGGTGGTGGCTGAGT +
Preference number: 2 (lower is better)
Translates to: TVRTSGTSDPRGEIWEACGVLSL*LWWWLS
Trigger: ACTCAGCCACCACCAGAGCCACAGGGAGAGCACACC...GCAGGCTTCCCAGATCTCTCCCCTGGGATCGGATGTACCTGAGGTCCTGACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR-3UTR TCA 90 bp GGTACATCCGATCCCAGGGGAGAGATCTGGGAAGCCTGCGGGCGCATGGAGATCACCAAAAGGCCAGTTTaGTGGGTCACAGTCCACACC +
Preference number: 2 (lower is better)
Translates to: GTSDPRGEIWEACGRMEITKRPV*WVTVHT
Trigger: GGTGTGGACTGTGACCCATCAAACTGGCCTTTTGGT...GATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTCCCCTGGGATCGGATGTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR-3UTR TCA 90 bp GAGAGATCTGGGAAGCCTGCGGGCGCATGGAGATCTGTCTCAGAGAGGAGGGTATGGGTGAATCGAGGATaGGCCACAGGACAAGGGGAC +
Preference number: 2 (lower is better)
Translates to: ERSGKPAGAWRSVSERRVWVNRG*ATGQGD
Trigger: GTCCCCTTGTCCTGTGGCTCATCCTCGATTCACCCA...TACCCTCCTCTCTGAGACAGATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR-3UTR TCA 90 bp TGTCCACCAAAAGGCCAGTTTGATGGGTCACAGTCCACACCTCAAGTTCTACAGTGTGAGCGGGCCCGCTaGGCTGCCCGCCTTCTCCTC +
Preference number: 2 (lower is better)
Translates to: CPPKGQFDGSQSTPQVLQCERAR*AARLLL
Trigger: GAGGAGAAGGCGGGCAGCTCAGCGGGCCCGCTCACA...CTGTAGAACTTGAGGTGTGGACTGTGACCCATCAAACTGGCCTTTTGGTGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR CCA 90 bp TCCCCGCAGTACAAAACTGCATCAGTGGGTGAATCGAGGATGAGCCACAGGACACCCAGGGGAGAGATCTaGGAAGCCTGCGGGCGCATG +
Preference number: 2 (lower is better)
Translates to: SPQYKTASVGESRMSHRTPRGEI*EACGRM
Trigger: CATGCGCCCGCAGGCTTCCCAGATCTCTCCCCTGGG...TGTCCTGTGGCTCATCCTCGATTCACCCACTGATGCAGTTTTGTACTGCGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR-3UTR CCA 90 bp GAGAGATCTGGGAAGCCTGCGGGCGCATGGAGATCTGTCTCAGAGAGGAGGGTATTCTCTCCCCTCGGGTaGCAGTTCTCCTCCTCACCA +
Preference number: 2 (lower is better)
Translates to: ERSGKPAGAWRSVSERRVFSPLG*QFSSSP
Trigger: TGGTGAGGAGGAGAACTGCCACCCGAGGGGAGAGAA...TACCCTCCTCTCTGAGACAGATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR GCA 90 bp CTTGGGGCCCGGCCAGAACCAGAAGGCTGGCGAAGAAAGGCTGCTTTGCTCCCTGAAATTGCTGGTGTGTaGCTCCCCGCAGTACAAAAC +
Preference number: 2 (lower is better)
Translates to: LGARPEPEGWRRKAALLPEIAGV*LPAVQN
Trigger: GTTTTGTACTGCGGGGAGGCACACACCAGCAATTTC...AGGGAGCAAAGCAGCCTTTCTTCGCCAGCCTTCTGGTTCTGGCCGGGCCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR GCA 90 bp GAGAGATCTGGGAAGCCTGCGGGCGCATGGAGATCTGTCTCAGAGAGGAGGGTATCTGCACATGTAGCCTaGTGTGTGCCCCAGGAACAG +
Preference number: 2 (lower is better)
Translates to: ERSGKPAGAWRSVSERRVSAHVA*CVPQEQ
Trigger: CTGTTCCTGGGGCACACAGCAGGCTACATGTGCAGA...TACCCTCCTCTCTGAGACAGATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR CCA 90 bp TTCAAATGGAACTTTGGTAGAAGGTACACTGGGACCCAGGGTAGCCCGGCAGCAGGCTTTGGAGAGGCATaGGGCAGCAGGACTTGGGGC +
Preference number: 2 (lower is better)
Translates to: FKWNFGRRYTGTQGSPAAGFGEA*GSRTWG
Trigger: GCCCCAAGTCCTGCTGCCCCATGCCTCTCCAAAGCC...TGCTGCCGGGCTACCCTGGGTCCCAGTGTACCTTCTACCAAAGTTCCATTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR TCA 90 bp ACAGTCAGGACCTCAGGTACATCCGATCCCAGGGGAGAGATCTGGGAAGCCTGCCTCTGTCCAGCAGTGTaGTGTTGCGGGAAACTACCT +
Preference number: 2 (lower is better)
Translates to: TVRTSGTSDPRGEIWEACLCPAV*CCGKLP
Trigger: AGGTAGTTTCCCGCAACATCACACTGCTGGACAGAG...GCAGGCTTCCCAGATCTCTCCCCTGGGATCGGATGTACCTGAGGTCCTGACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR-3UTR TCA 90 bp GTCCCTGGGAAAACCCACCTACTTGAGTCCCAGGAGCTGTGTGTACATCTCTGTCTCTGGGGGCTCCTCTaGGTTCTCCAGATGCCTCTG +
Preference number: 2 (lower is better)
Translates to: VPGKTHLLESQELCVHLCLWGLL*VLQMPL
Trigger: CAGAGGCATCTGGAGAACTCAGAGGAGCCCCCAGAG...ACAGAGATGTACACACAGCTCCTGGGACTCAAGTAGGTGGGTTTTCCCAGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR GCA 90 bp GAGAGATCTGGGAAGCCTGCGGGCGCATGGAGATCTGTCTCAGAGAGGAGGGTACTAGACCAGCTCTGTTaGTTTTCACACCAGCGTGGG +
Preference number: 2 (lower is better)
Translates to: ERSGKPAGAWRSVSERRVLDQLC*FSHQRG
Trigger: CCCACGCTGGTGTGAAAAGCAACAGAGCTGGTCTAG...TACCCTCCTCTCTGAGACAGATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR CCA 90 bp GAGAGATCTGGGAAGCCTGCGGGCGCATGGAGATCTGTCTCAGAGAGGAGGGTATTGGCTCTTCTCCTGTaGGCCTTGGTACAGCTTCTC +
Preference number: 2 (lower is better)
Translates to: ERSGKPAGAWRSVSERRVLALLL*ALVQLL
Trigger: GAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCAA...TACCCTCCTCTCTGAGACAGATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR-3UTR CCA 90 bp TTCAAATGGAACTTTGGTAGAAGGTACACTGGGACCCAGGGTAGCCCGGCAGCAACCGAGGCTACCGCCTaGACGTCCTTGTTCGGGGAA +
Preference number: 2 (lower is better)
Translates to: FKWNFGRRYTGTQGSPAATEATA*TSLFGE
Trigger: TTCCCCGAACAAGGACGTCCAGGCGGTAGCCTCGGT...TGCTGCCGGGCTACCCTGGGTCCCAGTGTACCTTCTACCAAAGTTCCATTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR TCA 90 bp GACCAACAGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCAACTGCATCAGTGGGTaGATCGAGGATGAGCCACAG +
Preference number: 2 (lower is better)
Translates to: DQQVLPYPNRNCWCVPPRNCISG*IEDEPQ
Trigger: CTGTGGCTCATCCTCGATTCACCCACTGATGCAGTT...GCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCTGTTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR-3UTR TCA 90 bp TTCAAATGGAACTTTGGTAGAAGGTACACTGGGACCCAGGGTAGCCCGGCAGCATGTGGCCTTTGGCAGTaGGGAAGTGGAGGCCCGTTT +
Preference number: 2 (lower is better)
Translates to: FKWNFGRRYTGTQGSPAACGLWQ*GSGGPF
Trigger: AAACGGGCCTCCACTTCCTCACTGCCAAAGGCCACA...TGCTGCCGGGCTACCCTGGGTCCCAGTGTACCTTCTACCAAAGTTCCATTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR GCA 90 bp GAGAGATCTGGGAAGCCTGCGGGCGCATGGAGATCTGTCTCAGAGAGGAGGGTAAATCCCGGGCAGCCATaGCAGGATCATTCTGAAAGT +
Preference number: 2 (lower is better)
Translates to: ERSGKPAGAWRSVSERRVNPGQP*QDHSES
Trigger: ACTTTCAGAATGATCCTGGCATGGCTGCCCGGGATT...TACCCTCCTCTCTGAGACAGATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR GCA 90 bp AATGGTGGAAAGACACCATCAAGAAATAGTGGTGTAGGGGTGGCTCTGAGCTGGAGGAGGGCCCTGAAGTaGACTGGGAATCCCGGGCAG +
Preference number: 2 (lower is better)
Translates to: NGGKTPSRNSGVGVALSWRRALK*TGNPGQ
Trigger: CTGCCCGGGATTCCCAGTGCACTTCAGGGCCCTCCT...CCAGCTCAGAGCCACCCCTACACCACTATTTCTTGATGGTGTCTTTCCACCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR GCA 90 bp GTCCCTGGGAAAACCCACCTACTTGAGTCCCAGGAGCTGTGTGTACATCTCTGTACTGGGGGCCACAGCTaGCACTGTTCAGGCAAGTCA +
Preference number: 2 (lower is better)
Translates to: VPGKTHLLESQELCVHLCTGGHS*HCSGKS
Trigger: TGACTTGCCTGAACAGTGGCAGCTGTGGCCCCCAGT...ACAGAGATGTACACACAGCTCCTGGGACTCAAGTAGGTGGGTTTTCCCAGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR CCA 90 bp AGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCAGTACAAAGGACAAGGGGACAGTaGGGACAGTCAGGACCTCAG +
Preference number: 2 (lower is better)
Translates to: RFSHTPTEIAGVCLPAVQRTRGQ*GQSGPQ
Trigger: CTGAGGTCCTGACTGTCCCCACTGTCCCCTTGTCCT...TTGTACTGCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR CAA 90 bp CACCATGTAAGGGCTAAAGCCGAGCTCCTTGGAGAGGGGCATCTTTaGGGGGCTGAAGGCAGCACTGTTCTTCCAGGTTTGCTGATGACA +
Preference number: 2 (lower is better)
Translates to: HHVRAKAELLGEGHL*GAEGSTVLPGLLMT
Trigger: TGTCATCAGCAAACCTGGAAGAACAGTGCTGCCTTCAGCCCCCAAAAGATGCCCCTCTCCAAGGAGCTCGGCTTTAGCCCTTACATGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR TCA 90 bp ACTTGGGGCCCGGCCAGAACCAGAAGGCTGGCGAAGAAAGGCTGCTTTGCTCCCATTTGGCCATGCGTCTaGTTGTTTGGTTTTCCTCTT +
Preference number: 2 (lower is better)
Translates to: TWGPARTRRLAKKGCFAPIWPCV*LFGFPL
Trigger: AAGAGGAAAACCAAACAATCAGACGCATGGCCAAAT...GGGAGCAAAGCAGCCTTTCTTCGCCAGCCTTCTGGTTCTGGCCGGGCCCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR GCA 90 bp AGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCAGTACAACTGGGAGGTCATAGGTaGACTCAGCTGACATCAGCC +
Preference number: 2 (lower is better)
Translates to: RFSHTPTEIAGVCLPAVQLGGHR*TQLTSA
Trigger: GGCTGATGTCAGCTGAGTGCACCTATGACCTCCCAG...TTGTACTGCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR GCA 90 bp TTCAAATGGAACTTTGGTAGAAGGTACACTGGGACCCAGGGTAGCCCGGCAGCATCTGGACCCAGGCTTTaGTCAGTCCATGGCTTCTGG +
Preference number: 2 (lower is better)
Translates to: FKWNFGRRYTGTQGSPAASGPRL*SVHGFW
Trigger: CCAGAAGCCATGGACTGAGCAAAGCCTGGGTCCAGA...TGCTGCCGGGCTACCCTGGGTCCCAGTGTACCTTCTACCAAAGTTCCATTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR CCA 90 bp TCCCCGCAGTACAAAACTGCATCAGTGGGTGAATCGAGGATGAGCCACAGGACAGGTCTGGCCAGAAGCTaGAATCTAGGGAGGTGCTGT +
Preference number: 2 (lower is better)
Translates to: SPQYKTASVGESRMSHRTGLARS*NLGRCC
Trigger: ACAGCACCTCCCTAGATTCCAGCTTCTGGCCAGACC...TGTCCTGTGGCTCATCCTCGATTCACCCACTGATGCAGTTTTGTACTGCGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR-3UTR CCA 90 bp TCCCCGCAGTACAAAACTGCATCAGTGGGTGAATCGAGGATGAGCCACAGGACATCTGGTAGGAGACTCTaGCTGGGGTTCATGGGGACT +
Preference number: 2 (lower is better)
Translates to: SPQYKTASVGESRMSHRTSGRRL*LGFMGT
Trigger: AGTCCCCATGAACCCCAGCCAGAGTCTCCTACCAGA...TGTCCTGTGGCTCATCCTCGATTCACCCACTGATGCAGTTTTGTACTGCGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR CCA 90 bp AGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCAGTACAAAGATGCCTCTGTCTCTaGGGATCTGAGCCGCCTCTT +
Preference number: 2 (lower is better)
Translates to: RFSHTPTEIAGVCLPAVQRCLCL*GSEPPL
Trigger: AAGAGGCGGCTCAGATCCCCAGAGACAGAGGCATCT...TTGTACTGCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR TCA 90 bp GTCCCTGGGAAAACCCACCTACTTGAGTCCCAGGAGCTGTGTGTACATCTCTGTCAGCTTCTCTTGGACTaGCCTCTGTGTCTAGACCAG +
Preference number: 2 (lower is better)
Translates to: VPGKTHLLESQELCVHLCQLLLD*PLCLDQ
Trigger: CTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTG...ACAGAGATGTACACACAGCTCCTGGGACTCAAGTAGGTGGGTTTTCCCAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR-3UTR GCA 90 bp GACCAACAGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCTATGGGCTGGTCAAATaGAGGGCACTAATCTGTTCC +
Preference number: 2 (lower is better)
Translates to: DQQVLPYPNRNCWCVPPRYGLVK*RALICS
Trigger: GGAACAGATTAGTGCCCTGCATTTGACCAGCCCATA...GCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCTGTTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR-3UTR GCA 90 bp GTCCCTGGGAAAACCCACCTACTTGAGTCCCAGGAGCTGTGTGTACATCTCTGTCTGCCAAGCGTCACCTaGCATTCCCAGAAGAACACA +
Preference number: 2 (lower is better)
Translates to: VPGKTHLLESQELCVHLCLPSVT*HSQKNT
Trigger: TGTGTTCTTCTGGGAATGGCAGGTGACGCTTGGCAG...ACAGAGATGTACACACAGCTCCTGGGACTCAAGTAGGTGGGTTTTCCCAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR-3UTR CCA 90 bp GAGAGATCTGGGAAGCCTGCGGGCGCATGGAGATCTGTCTCAGAGAGGAGGGTATCAGTCCATGGCTTCTaGCTACAACCTGAGTCTAAA +
Preference number: 2 (lower is better)
Translates to: ERSGKPAGAWRSVSERRVSVHGF*LQPESK
Trigger: TTTAGACTCAGGTTGTAGCCAGAAGCCATGGACTGA...TACCCTCCTCTCTGAGACAGATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR CCA 90 bp CTCCAGGGTTTCCTATGTCCATTGAGGGAGTGTTTCTGGGATAAGAGGCTTCTTCCCTCGGGCTCTGTCTaGCTTTGTTTGCTGCCCTCC +
Preference number: 2 (lower is better)
Translates to: LQGFLCPLRECFWDKRLLPSGSV*LCLLPS
Trigger: GGAGGGCAGCAAACAAAGCCAGACAGAGCCCGAGGG...AAGAAGCCTCTTATCCCAGAAACACTCCCTCAATGGACATAGGAAACCCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR CCA 90 bp TTCAAATGGAACTTTGGTAGAAGGTACACTGGGACCCAGGGTAGCCCGGCAGCACCAGAACCAGAAGGCTaGCGAAGAAAGGCTGCTTTG +
Preference number: 2 (lower is better)
Translates to: FKWNFGRRYTGTQGSPAAPEPEG*RRKAAL
Trigger: CAAAGCAGCCTTTCTTCGCCAGCCTTCTGGTTCTGG...TGCTGCCGGGCTACCCTGGGTCCCAGTGTACCTTCTACCAAAGTTCCATTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR TCA 90 bp AAATTGCTGGTGTGTGCCTCCCCGCAGTACAAAACTGCATCAGTGGGTGAATCGCACAGTGAGCCTAGCTaGAACATGGTATGGGCTGGT +
Preference number: 2 (lower is better)
Translates to: KLLVCASPQYKTASVGESHSEPS*NMVWAG
Trigger: ACCAGCCCATACCATGTTTCAGCTAGGCTCACTGTG...CGATTCACCCACTGATGCAGTTTTGTACTGCGGGGAGGCACACACCAGCAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR-3UTR TCA 90 bp ACTTGGGGCCCGGCCAGAACCAGAAGGCTGGCGAAGAAAGGCTGCTTTGCTCCCATCAGAAAAGTCTTTTaGGTCAGATATCTTCTCCTC +
Preference number: 2 (lower is better)
Translates to: TWGPARTRRLAKKGCFAPIRKVF*VRYLLL
Trigger: GAGGAGAAGATATCTGACTCAAAAGACTTTTCTGAT...GGGAGCAAAGCAGCCTTTCTTCGCCAGCCTTCTGGTTCTGGCCGGGCCCCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR GCA 90 bp ACAGTCAGGACCTCAGGTACATCCGATCCCAGGGGAGAGATCTGGGAAGCCTGCCTTCATGCAAACATGTaGACACCCACAGATGTATAC +
Preference number: 2 (lower is better)
Translates to: TVRTSGTSDPRGEIWEACLHANM*TPTDVY
Trigger: GTATACATCTGTGGGTGTGCACATGTTTGCATGAAG...GCAGGCTTCCCAGATCTCTCCCCTGGGATCGGATGTACCTGAGGTCCTGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR-3UTR CCA 90 bp ACATGGTATGGGCTGGTCAAATGCAGGGCACTAATCTGTTCCCCAAAGACCAGAGGTCTGGCCAGAAGCTaGAATCTAGGGAGGTGCTGT +
Preference number: 2 (lower is better)
Translates to: TWYGLVKCRALICSPKTRGLARS*NLGRCC
Trigger: ACAGCACCTCCCTAGATTCCAGCTTCTGGCCAGACC...TCTGGTCTTTGGGGAACAGATTAGTGCCCTGCATTTGACCAGCCCATACCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR-3UTR CCA 90 bp ACTTGGGGCCCGGCCAGAACCAGAAGGCTGGCGAAGAAAGGCTGCTTTGCTCCCTCACAATCTTCTCTTTaGCGTTGTTTACTTGTTCCT +
Preference number: 2 (lower is better)
Translates to: TWGPARTRRLAKKGCFAPSQSSL*RCLLVP
Trigger: AGGAACAAGTAAACAACGCCAAAGAGAAGATTGTGA...GGGAGCAAAGCAGCCTTTCTTCGCCAGCCTTCTGGTTCTGGCCGGGCCCCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR CAA 90 bp ACCAGCTCTGTTGCTTTTCACACCAGCGTGGGTTTCAAGTCATCTTaGAAGTTCACAATAGGCTTGGAGCGGGCCCACAGCTTTTCCCAG +
Preference number: 2 (lower is better)
Translates to: TSSVAFHTSVGFKSS*KFTIGLERAHSFSQ
Trigger: CTGGGAAAAGCTGTGGGCCCGCTCCAAGCCTATTGTGAACTTCAAAGATGACTTGAAACCCACGCTGGTGTGAAAAGCAACAGAGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR TCA 90 bp ACATGGTATGGGCTGGTCAAATGCAGGGCACTAATCTGTTCCCCAAAGACCAGACAGCTTCTCTTGGACTaGCCTCTGTGTCTAGACCAG +
Preference number: 2 (lower is better)
Translates to: TWYGLVKCRALICSPKTRQLLLD*PLCLDQ
Trigger: CTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTG...TCTGGTCTTTGGGGAACAGATTAGTGCCCTGCATTTGACCAGCCCATACCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR-3UTR TCA 90 bp GTCCCTGGGAAAACCCACCTACTTGAGTCCCAGGAGCTGTGTGTACATCTCTGTCCCAGCTTTCTTACATaGGCCTTGCTTTGTTGTCTC +
Preference number: 2 (lower is better)
Translates to: VPGKTHLLESQELCVHLCPSFLT*ALLCCL
Trigger: GAGACAACAAAGCAAGGCTCATGTAAGAAAGCTGGG...ACAGAGATGTACACACAGCTCCTGGGACTCAAGTAGGTGGGTTTTCCCAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR-3UTR TCA 90 bp TCCCCGCAGTACAAAACTGCATCAGTGGGTGAATCGAGGATGAGCCACAGGACAATAGGTGCACTCAGCTaGCATCAGCCTCACAATCTT +
Preference number: 2 (lower is better)
Translates to: SPQYKTASVGESRMSHRTIGALS*HQPHNL
Trigger: AAGATTGTGAGGCTGATGTCAGCTGAGTGCACCTAT...TGTCCTGTGGCTCATCCTCGATTCACCCACTGATGCAGTTTTGTACTGCGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR GCA 90 bp AGAGTCCAGGGGTGTCAGCAGCCCCCAAGATTCCATGATAAATTGATGATACATGAGATCTGGGAAGCCTaGGGGCGCATGGAGATCTGT +
Preference number: 2 (lower is better)
Translates to: RVQGCQQPPRFHDKLMIHEIWEA*GRMEIC
Trigger: ACAGATCTCCATGCGCCCGCAGGCTTCCCAGATCTC...ATGTATCATCAATTTATCATGGAATCTTGGGGGCTGCTGACACCCCTGGACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR CCA 90 bp TGTCCACCAAAAGGCCAGTTTGATGGGTCACAGTCCACACCTCAAGTTCTACAGTTGGCTCTTCTCCTGTaGGCCTTGGTACAGCTTCTC +
Preference number: 2 (lower is better)
Translates to: CPPKGQFDGSQSTPQVLQLALLL*ALVQLL
Trigger: GAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCAA...CTGTAGAACTTGAGGTGTGGACTGTGACCCATCAAACTGGCCTTTTGGTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR-3UTR CCA 90 bp CTCCAGGGTTTCCTATGTCCATTGAGGGAGTGTTTCTGGGATAAGAGGCTTCTTGTAGGAGACTCTGGCTaGGGTTCATGGGGACTTGGT +
Preference number: 2 (lower is better)
Translates to: LQGFLCPLRECFWDKRLLVGDSG*GSWGLG
Trigger: ACCAAGTCCCCATGAACCCCAGCCAGAGTCTCCTAC...AAGAAGCCTCTTATCCCAGAAACACTCCCTCAATGGACATAGGAAACCCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR CAA 90 bp CTCGGGTGGCAGTTCTCCTCCTCACCATACTGGGTATGGAAGCTTTaGTTGGGAGTGCTGAAATATTTGGCCATGCGTCTGATTGTTTGG +
Preference number: 2 (lower is better)
Translates to: LGWQFSSSPYWVWKL*LGVLKYLAMRLIVW
Trigger: CCAAACAATCAGACGCATGGCCAAATATTTCAGCACTCCCAACAAAAGCTTCCATACCCAGTATGGTGAGGAGGAGAACTGCCACCCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR CCA 90 bp AGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCAGTACAATCACCATACTGGGTATaGAAGCTTTTGTTGGGAGTG +
Preference number: 2 (lower is better)
Translates to: RFSHTPTEIAGVCLPAVQSPYWV*KLLLGV
Trigger: CACTCCCAACAAAAGCTTCCATACCCAGTATGGTGA...TTGTACTGCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR GCA 90 bp AATGGTGGAAAGACACCATCAAGAAATAGTGGTGTAGGGGTGGCTCTGAGCTGGTATGGGCTGGTCAAATaGAGGGCACTAATCTGTTCC +
Preference number: 2 (lower is better)
Translates to: NGGKTPSRNSGVGVALSWYGLVK*RALICS
Trigger: GGAACAGATTAGTGCCCTGCATTTGACCAGCCCATA...CCAGCTCAGAGCCACCCCTACACCACTATTTCTTGATGGTGTCTTTCCACCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR-3UTR CCA 90 bp AGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCAGTACAAGAATGTAGGCTGACCTaGACAGAAAATCCTATGTGT +
Preference number: 2 (lower is better)
Translates to: RFSHTPTEIAGVCLPAVQECRLT*TENPMC
Trigger: ACACATAGGATTTTCTGTCCAGGTCAGCCTACATTC...TTGTACTGCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR CAA 90 bp GGGTGGCAGTTCTCCTCCTCACCATACTGGGTATGGAAGCTTTTGTaGGGAGTGCTGAAATATTTGGCCATGCGTCTGATTGTTTGGTTT +
Preference number: 2 (lower is better)
Translates to: GWQFSSSPYWVWKLL*GVLKYLAMRLIVWF
Trigger: AAACCAAACAATCAGACGCATGGCCAAATATTTCAGCACTCCCAACAAAAGCTTCCATACCCAGTATGGTGAGGAGGAGAACTGCCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR GCA 90 bp AGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCAGTACAATACAGAAATTTCCCATaGATCTCTCCATCTGTCTGT +
Preference number: 2 (lower is better)
Translates to: RFSHTPTEIAGVCLPAVQYRNFP*ISPSVC
Trigger: ACAGACAGATGGAGAGATGCATGGGAAATTTCTGTA...TTGTACTGCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR-3UTR GCA 90 bp ACATGGTATGGGCTGGTCAAATGCAGGGCACTAATCTGTTCCCCAAAGACCAGAGAGAGGAGGGTAAAGTaGCATAATGGTGGAAAGACA +
Preference number: 2 (lower is better)
Translates to: TWYGLVKCRALICSPKTRERRVK*HNGGKT
Trigger: TGTCTTTCCACCATTATGGCACTTTACCCTCCTCTC...TCTGGTCTTTGGGGAACAGATTAGTGCCCTGCATTTGACCAGCCCATACCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR-3UTR GCA 90 bp TCCCTGGGAAAACCCACCTACTTGAGTCCCAGGAGCTGTGTGTACATCTCTGTCTTGTTTACTTGTTCCTaGAGGCTTTCAATCACAGCA +
Preference number: 2 (lower is better)
Translates to: SLGKPTYLSPRSCVYISVLFTCS*RLSITA
Trigger: TGCTGTGATTGAAAGCCTGCAGGAACAAGTAAACAA...GACAGAGATGTACACACAGCTCCTGGGACTCAAGTAGGTGGGTTTTCCCAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR CCA 90 bp CCAAAAGGCCAGTTTGATGGGTCACAGTCCACACCTCAAGTTCTACAGAAATTTTTCTCCTGTGGGCCTTaGTACAGCTTCTCTTGGACT +
Preference number: 2 (lower is better)
Translates to: PKGQFDGSQSTPQVLQKFFSCGP*YSFSWT
Trigger: AGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAA...AAATTTCTGTAGAACTTGAGGTGTGGACTGTGACCCATCAAACTGGCCTTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR CAA 90 bp ATGGCTTCTGGCTACAACCTGAGTCTAAATGATCAGAAAAGTCTTTaGAGTCAGATATCTTCTCCTCCTTCCCTGGGGAGAAGCTGGAGT +
Preference number: 2 (lower is better)
Translates to: MASGYNLSLNDQKSL*SQISSPPSLGRSWS
Trigger: ACTCCAGCTTCTCCCCAGGGAAGGAGGAGAAGATATCTGACTCAAAAGACTTTTCTGATCATTTAGACTCAGGTTGTAGCCAGAAGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR CCA 90 bp GTAAGGCTGCGAGGTAGTAACAGGACAGGCAATGCCTCTCTTTTTATAGATCAAAGCCTAGCTGAAACATaGTATGGGCTGGTCAAATGC +
Preference number: 2 (lower is better)
Translates to: VRLRGSNRTGNASLFIDQSLAET*YGLVKC
Trigger: GCATTTGACCAGCCCATACCATGTTTCAGCTAGGCT...TTGATCTATAAAAAGAGAGGCATTGCCTGTCCTGTTACTACCTCGCAGCCTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR CAA 90 bp AAAAGACTCCTCTCGGGAGTCATTTCTCTTTTATTATGGTACCACTaGGACAGCACACACACAGCACAAGAAACTGCAAACCCATGCACA +
Preference number: 2 (lower is better)
Translates to: KRLLSGVISLLLWYH*DSTHTAQETANPCT
Trigger: TGTGCATGGGTTTGCAGTTTCTTGTGCTGTGTGTGTGCTGTCCAAGTGGTACCATAATAAAAGAGAAATGACTCCCGAGAGGAGTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR GCA 90 bp CTCCAGGGTTTCCTATGTCCATTGAGGGAGTGTTTCTGGGATAAGAGGCTTCTTACATTTAGAGCCAAATaGCCCCCTCTGAGAATATTT +
Preference number: 2 (lower is better)
Translates to: LQGFLCPLRECFWDKRLLTFRAK*PPLRIF
Trigger: AAATATTCTCAGAGGGGGGCATTTGGCTCTAAATGT...AAGAAGCCTCTTATCCCAGAAACACTCCCTCAATGGACATAGGAAACCCTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR CCA 90 bp AGTTTTACAGAATGTAGGCTGACCTGGACAGAAAATCCTATGTGTTCATTCAGCTTCTCCTGTGGGCCTTaGTACAGCTTCTCTTGGACT +
Preference number: 2 (lower is better)
Translates to: SFTECRLTWTENPMCSFSFSCGP*YSFSWT
Trigger: AGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAA...GCTGAATGAACACATAGGATTTTCTGTCCAGGTCAGCCTACATTCTGTAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR GCA 72 bp AAAGTCAGAGAGGTGACCCGAAGGCCCCTGAGCAGCTaGCAGGGTGTGGACCGAGGCTACCGCCTGGACGTC +
Preference number: 3 (lower is better)
Translates to: KVREVTRRPLSS*QGVDRGYRLDV
Trigger: GACGTCCAGGCGGTAGCCTCGGTCCACACCCTGGCAGCTGCTCAGGGGCCTTCGGGTCACCTCTCTGACTTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR GCA 72 bp GGCCCGGCCAGAACCAGAAGGCTGGCGAAGAAAGGCTaGTTTGCTCCCTCTAGCCCCCTCGGGCTCTGTCTG +
Preference number: 3 (lower is better)
Translates to: GPARTRRLAKKG*FAPSSPLGLCL
Trigger: CAGACAGAGCCCGAGGGGGCTAGAGGGAGCAAAGCAGCCTTTCTTCGCCAGCCTTCTGGTTCTGGCCGGGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR CCA 72 bp GCAGCAGGACTTGGGGCCCGGCCAGAACCAGAAGGCTaGCGAAGAAAGGCTGCTTTGCTCCCTCTAGCCCCC +
Preference number: 3 (lower is better)
Translates to: AAGLGARPEPEG*RRKAALLPLAP
Trigger: GGGGGCTAGAGGGAGCAAAGCAGCCTTTCTTCGCCAGCCTTCTGGTTCTGGCCGGGCCCCAAGTCCTGCTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR TCA 72 bp AGCTCCCTTGGGAGGTGCCAGTGTGGCCTTTGGCAGTaGGGAAGTGGAGGCCCGTTTCCTGAGGTGAGGACC +
Preference number: 3 (lower is better)
Translates to: SSLGRCQCGLWQ*GSGGPFPEVRT
Trigger: GGTCCTCACCTCAGGAAACGGGCCTCCACTTCCTCACTGCCAAAGGCCACACTGGCACCTCCCAAGGGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR GCA 72 bp AAGAAGCTGTGCTTCCAGGAGGGCCTCATGGTTCAGTaGCTGGAGAGTCCAGGGGTGTCAGCAGCCCCCAAG +
Preference number: 3 (lower is better)
Translates to: KKLCFQEGLMVQ*LESPGVSAAPK
Trigger: CTTGGGGGCTGCTGACACCCCTGGACTCTCCAGGCACTGAACCATGAGGCCCTCCTGGAAGCACAGCTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR CCA 72 bp ACAGTGGACCCAGGTGTGCTCTCCCTGTGGCTCTGGTaGTGGCTGAGTTCCTCGCACTCATCCTTCACCAGC +
Preference number: 3 (lower is better)
Translates to: TVDPGVLSLWLW*WLSSSHSSFTS
Trigger: GCTGGTGAAGGATGAGTGCGAGGAACTCAGCCACCACCAGAGCCACAGGGAGAGCACACCTGGGTCCACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR CCA 72 bp AGCACAGTGGACCCAGGTGTGCTCTCCCTGTGGCTCTaGTGGTGGCTGAGTTCCTCGCACTCATCCTTCACC +
Preference number: 3 (lower is better)
Translates to: STVDPGVLSLWL*WWLSSSHSSFT
Trigger: GGTGAAGGATGAGTGCGAGGAACTCAGCCACCACCAGAGCCACAGGGAGAGCACACCTGGGTCCACTGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR CCA 72 bp AGCTGTGCTTCCAGGAGGGCCTCATGGTTCAGTGCCTaGAGAGTCCAGGGGTGTCAGCAGCCCCCAAGATTC +
Preference number: 3 (lower is better)
Translates to: SCASRRASWFSA*RVQGCQQPPRF
Trigger: GAATCTTGGGGGCTGCTGACACCCCTGGACTCTCCAGGCACTGAACCATGAGGCCCTCCTGGAAGCACAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR CAA 90 bp CTCATGGTTCAGTGCCTGGAGAGTCCAGGGGTGTCAGCAGCCCCCAAGATTCCAGTGCCAGTGTGGCCTTaGGCAGTGAGGAAGTGGAGG +
Preference number: 3 (lower is better)
Translates to: LMVQCLESPGVSAAPKIPVPVWP*AVRKWR
Trigger: CCTCCACTTCCTCACTGCCAAAGGCCACACTGGCAC...TGGAATCTTGGGGGCTGCTGACACCCCTGGACTCTCCAGGCACTGAACCATGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR GCA 72 bp AGGGCCCTGAAGTGCACTGGGAATCCCGGGCAGCCATaGCAGGATCATTCTGAAAGTCAGAGAGGTGACCCG +
Preference number: 3 (lower is better)
Translates to: RALKCTGNPGQP*QDHSESQRGDP
Trigger: CGGGTCACCTCTCTGACTTTCAGAATGATCCTGGCATGGCTGCCCGGGATTCCCAGTGCACTTCAGGGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR CCA 72 bp AGGACCTCAGGTACATCCGATCCCAGGGGAGAGATCTaGGAAGCCTGCGGGCGCATGGAGATCTGTCTCAGA +
Preference number: 3 (lower is better)
Translates to: RTSGTSDPRGEI*EACGRMEICLR
Trigger: TCTGAGACAGATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTCCCCTGGGATCGGATGTACCTGAGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR-3UTR CAA 90 bp ACCAACAGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCAACCGCCTGGACGTCCTaGTTCGGGGAAGAGGCAGGT +
Preference number: 3 (lower is better)
Translates to: TNRFSHTPTEIAGVCLPATAWTS*FGEEAG
Trigger: ACCTGCCTCTTCCCCGAACAAGGACGTCCAGGCGGT...TGCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCTGTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR CAA 90 bp CTCATGGTTCAGTGCCTGGAGAGTCCAGGGGTGTCAGCAGCCCCCAAGATTCCAAAGTCAGGTGAGGCTTaGGAGAGGCATGGGGCAGCA +
Preference number: 3 (lower is better)
Translates to: LMVQCLESPGVSAAPKIPKSGEA*ERHGAA
Trigger: TGCTGCCCCATGCCTCTCCAAAGCCTCACCTGACTT...TGGAATCTTGGGGGCTGCTGACACCCCTGGACTCTCCAGGCACTGAACCATGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR GCA 72 bp CCTCAAGGCTTTGTGCATATGAGGAGGGCCCTGAAGTaGACTGGGAATCCCGGGCAGCCATGCCAGGATCAT +
Preference number: 3 (lower is better)
Translates to: PQGFVHMRRALK*TGNPGQPCQDH
Trigger: ATGATCCTGGCATGGCTGCCCGGGATTCCCAGTGCACTTCAGGGCCCTCCTCATATGCACAAAGCCTTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR CCA 72 bp CTGGCTGGGGTTCATGGGGACTTGGTCTCCTCTTTCTaGACCCAGGCTTTGCTCAGTCCATGGCTTCTGGCT +
Preference number: 3 (lower is better)
Translates to: LAGVHGDLVSSF*TQALLSPWLLA
Trigger: AGCCAGAAGCCATGGACTGAGCAAAGCCTGGGTCCAGAAAGAGGAGACCAAGTCCCCATGAACCCCAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR CAA 90 bp GTCCCTGGGAAAACCCACCTACTTGAGTCCCAGGAGCTGTGTGTACATCTCTGTGTGCCAGTGTGGCCTTaGGCAGTGAGGAAGTGGAGG +
Preference number: 3 (lower is better)
Translates to: VPGKTHLLESQELCVHLCVPVWP*AVRKWR
Trigger: CCTCCACTTCCTCACTGCCAAAGGCCACACTGGCAC...ACAGAGATGTACACACAGCTCCTGGGACTCAAGTAGGTGGGTTTTCCCAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR CCA 72 bp CGCCTCTTTCTGGTAGGAGACTCTGGCTGGGGTTCATaGGGACTTGGTCTCCTCTTTCTGGACCCAGGCTTT +
Preference number: 3 (lower is better)
Translates to: RLFLVGDSGWGS*GLGLLFLDPGF
Trigger: AAAGCCTGGGTCCAGAAAGAGGAGACCAAGTCCCCATGAACCCCAGCCAGAGTCTCCTACCAGAAAGAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR CCA 72 bp GATCTGAGCCGCCTCTTTCTGGTAGGAGACTCTGGCTaGGGTTCATGGGGACTTGGTCTCCTCTTTCTGGAC +
Preference number: 3 (lower is better)
Translates to: DLSRLFLVGDSG*GSWGLGLLFLD
Trigger: GTCCAGAAAGAGGAGACCAAGTCCCCATGAACCCCAGCCAGAGTCTCCTACCAGAAAGAGGCGGCTCAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR TCA 72 bp GGCAGCCCCCTCTGGGAGGTCATAGGTGCACTCAGCTaGCATCAGCCTCACAATCTTCTCTTTGGCGTTGTT +
Preference number: 3 (lower is better)
Translates to: GSPLWEVIGALS*HQPHNLLFGVV
Trigger: AACAACGCCAAAGAGAAGATTGTGAGGCTGATGTCAGCTGAGTGCACCTATGACCTCCCAGAGGGGGCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR CAA 90 bp AGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCAGTACAACTTCTCCTGTGGGCCTaGGTACAGCTTCTCTTGGAC +
Preference number: 3 (lower is better)
Translates to: RFSHTPTEIAGVCLPAVQLLLWA*VQLLLD
Trigger: GTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAG...TTGTACTGCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR-3UTR CAA 90 bp GTCCCTGGGAAAACCCACCTACTTGAGTCCCAGGAGCTGTGTGTACATCTCTGTGGAAAACCCACCTACTaGAGTCCCAGGAGCTGTGTG +
Preference number: 3 (lower is better)
Translates to: VPGKTHLLESQELCVHLCGKPTY*SPRSCV
Trigger: CACACAGCTCCTGGGACTCAAGTAGGTGGGTTTTCC...ACAGAGATGTACACACAGCTCCTGGGACTCAAGTAGGTGGGTTTTCCCAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR-3UTR CAA 90 bp GGTACATCCGATCCCAGGGGAGAGATCTGGGAAGCCTGCGGGCGCATGGAGATCTGGGTATGGAAGCTTTaGTTGGGAGTGCTGAAATAT +
Preference number: 3 (lower is better)
Translates to: GTSDPRGEIWEACGRMEIWVWKL*LGVLKY
Trigger: ATATTTCAGCACTCCCAACAAAAGCTTCCATACCCA...GATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTCCCCTGGGATCGGATGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR CAA 90 bp ACTTGGGGCCCGGCCAGAACCAGAAGGCTGGCGAAGAAAGGCTGCTTTGCTCCCTTTGGCGTTGTTTACTaGTTCCTGCAGGCTTTCAAT +
Preference number: 3 (lower is better)
Translates to: TWGPARTRRLAKKGCFAPFGVVY*FLQAFN
Trigger: ATTGAAAGCCTGCAGGAACAAGTAAACAACGCCAAA...GGGAGCAAAGCAGCCTTTCTTCGCCAGCCTTCTGGTTCTGGCCGGGCCCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR CAA 90 bp TCCCTGGGAAAACCCACCTACTTGAGTCCCAGGAGCTGTGTGTACATCTCTGTCCTAAAGCCGAGCTCCTaGGAGAGGGGCATCTTTTGG +
Preference number: 3 (lower is better)
Translates to: SLGKPTYLSPRSCVYISVLKPSS*ERGIFW
Trigger: CCAAAAGATGCCCCTCTCCAAGGAGCTCGGCTTTAG...GACAGAGATGTACACACAGCTCCTGGGACTCAAGTAGGTGGGTTTTCCCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR TCA 72 bp CATGAAGCCATGTGTCCCTGGGAAAACCCACCTACTTaGGTCCCAGGAGCTGTGTGTACATCTCTGTCCAGC +
Preference number: 3 (lower is better)
Translates to: HEAMCPWENPPT*VPGAVCTSLSS
Trigger: GCTGGACAGAGATGTACACACAGCTCCTGGGACTCAAGTAGGTGGGTTTTCCCAGGGACACATGGCTTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR TCA 72 bp CTGCCAAGCGTCACCTGCCATTCCCAGAAGAACACATaGAGCCATGTGTCCCTGGGAAAACCCACCTACTTG +
Preference number: 3 (lower is better)
Translates to: LPSVTCHSQKNT*SHVSLGKPTYL
Trigger: CAAGTAGGTGGGTTTTCCCAGGGACACATGGCTTCATGTGTTCTTCTGGGAATGGCAGGTGACGCTTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR TCA 72 bp GCCTCAGGGCCCAGGCCCAGATCTTGTAAGACCTCCTaGAGTTTCTCCCTGATTACTGAACTAACCCGTGAC +
Preference number: 3 (lower is better)
Translates to: ASGPRPRSCKTS*SFSLITELTRD
Trigger: GTCACGGGTTAGTTCAGTAATCAGGGAGAAACTTCAGGAGGTCTTACAAGATCTGGGCCTGGGCCCTGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR GCA 72 bp ATGGGGACTTGGTCTCCTCTTTCTGGACCCAGGCTTTaGTCAGTCCATGGCTTCTGGCTACAACCTGAGTCT +
Preference number: 3 (lower is better)
Translates to: MGTWSPLSGPRL*SVHGFWLQPES
Trigger: AGACTCAGGTTGTAGCCAGAAGCCATGGACTGAGCAAAGCCTGGGTCCAGAAAGAGGAGACCAAGTCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR CAA 90 bp AGGCACAGCCTGAGGGCACTGGGGGCCACAGCTGCCACTGTTCAGGCAAGTCAGCACAAAAATATGATATaGCCAAGTACTATGCTGGAC +
Preference number: 3 (lower is better)
Translates to: RHSLRALGATAATVQASQHKNMI*PSTMLD
Trigger: GTCCAGCATAGTACTTGGCAATATCATATTTTTGTG...CTGACTTGCCTGAACAGTGGCAGCTGTGGCCCCCAGTGCCCTCAGGCTGTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR TCA 72 bp TGGCCTTTGGCAGTGAGGAAGTGGAGGCCCGTTTCCTaGGGTGAGGACCCAGGTCTATTATTCTGGACTATA +
Preference number: 3 (lower is better)
Translates to: WPLAVRKWRPVS*GEDPGLLFWTI
Trigger: TATAGTCCAGAATAATAGACCTGGGTCCTCACCTCAGGAAACGGGCCTCCACTTCCTCACTGCCAAAGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR GCA 72 bp AGGGCCGGTGGCAGCGGCAGAAGAACTCATCTGAGCTaGTGGACTCAGTATCAAAATAGCTGTGTTGAGAAG +
Preference number: 3 (lower is better)
Translates to: RAGGSGRRTHLS*WTQYQNSCVEK
Trigger: CTTCTCAACACAGCTATTTTGATACTGAGTCCAGCAGCTCAGATGAGTTCTTCTGCCGCTGCCACCGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR CCA 72 bp AGGATTGCCAGATTTAGAGTCCACATGAATGAATGGTaGGCTGCTAGTGGTGGCATGCTGGGAGGAAGGGAG +
Preference number: 3 (lower is better)
Translates to: RIARFRVHMNEW*AASGGMLGGRE
Trigger: CTCCCTTCCTCCCAGCATGCCACCACTAGCAGCCCACCATTCATTCATGTGGACTCTAAATCTGGCAATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR CAA 90 bp ACATGGTATGGGCTGGTCAAATGCAGGGCACTAATCTGTTCCCCAAAGACCAGAATACCCCAACAGAAATaGCTGGTGTGTGCCTCCCCG +
Preference number: 3 (lower is better)
Translates to: TWYGLVKCRALICSPKTRIPQQK*LVCASP
Trigger: CGGGGAGGCACACACCAGCAATTTCTGTTGGGGTAT...TCTGGTCTTTGGGGAACAGATTAGTGCCCTGCATTTGACCAGCCCATACCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR-3UTR CAA 90 bp TGTCCACCAAAAGGCCAGTTTGATGGGTCACAGTCCACACCTCAAGTTCTACAGGGAAAACCCACCTACTaGAGTCCCAGGAGCTGTGTG +
Preference number: 3 (lower is better)
Translates to: CPPKGQFDGSQSTPQVLQGKPTY*SPRSCV
Trigger: CACACAGCTCCTGGGACTCAAGTAGGTGGGTTTTCC...CTGTAGAACTTGAGGTGTGGACTGTGACCCATCAAACTGGCCTTTTGGTGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR-3UTR CAA 90 bp AGAGTCCAGGGGTGTCAGCAGCCCCCAAGATTCCATGATAAATTGATGATACATGGGCTCTGTCTGGCTTaGTTTGCTGCCCTCCAGGGT +
Preference number: 3 (lower is better)
Translates to: RVQGCQQPPRFHDKLMIHGLCLA*FAALQG
Trigger: ACCCTGGAGGGCAGCAAACAAAGCCAGACAGAGCCC...ATGTATCATCAATTTATCATGGAATCTTGGGGGCTGCTGACACCCCTGGACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR CAA 90 bp TGGAGATCTGTCTCAGAGAGGAGGGTAAAGTGCCATAATGGTGGAAAGACACCACTTCTCCTGTGGGCCTaGGTACAGCTTCTCTTGGAC +
Preference number: 3 (lower is better)
Translates to: WRSVSERRVKCHNGGKTPLLLWA*VQLLLD
Trigger: GTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAG...TGGTGTCTTTCCACCATTATGGCACTTTACCCTCCTCTCTGAGACAGATCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR-3UTR CAA 90 bp TCTGTGTCTAGACCAGCTCTGTTGCTTTTCACACCAGCGTGGGTTTCAAGTCATATACCCCAACAGAAATaGCTGGTGTGTGCCTCCCCG +
Preference number: 3 (lower is better)
Translates to: SVSRPALLLFTPAWVSSHIPQQK*LVCASP
Trigger: CGGGGAGGCACACACCAGCAATTTCTGTTGGGGTAT...ATGACTTGAAACCCACGCTGGTGTGAAAAGCAACAGAGCTGGTCTAGACACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR CAA 90 bp AGAGTCCAGGGGTGTCAGCAGCCCCCAAGATTCCATGATAAATTGATGATACATTCTGGAATCAGTAGTTaGTGGGGCCAGGCTGGGGCT +
Preference number: 3 (lower is better)
Translates to: RVQGCQQPPRFHDKLMIHSGISS*WGQAGA
Trigger: AGCCCCAGCCTGGCCCCACAAACTACTGATTCCAGA...ATGTATCATCAATTTATCATGGAATCTTGGGGGCTGCTGACACCCCTGGACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR CAA 90 bp CTCCAGGGTTTCCTATGTCCATTGAGGGAGTGTTTCTGGGATAAGAGGCTTCTTTCTGTCTGGCTTTGTTaGCTGCCCTCCAGGGTACCT +
Preference number: 3 (lower is better)
Translates to: LQGFLCPLRECFWDKRLLSVWLC*LPSRVP
Trigger: AGGTACCCTGGAGGGCAGCAAACAAAGCCAGACAGA...AAGAAGCCTCTTATCCCAGAAACACTCCCTCAATGGACATAGGAAACCCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR TCA 72 bp CTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTaGCCTCTGTGTCTAGACCAGCTCTGTTGCTTTTCA +
Preference number: 3 (lower is better)
Translates to: LLLWALVQLLLD*PLCLDQLCCFS
Trigger: TGAAAAGCAACAGAGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR CCA 72 bp TGCAGGGCACTAATCTGTTCCCCAAAGACCAGAAATTaGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCT +
Preference number: 3 (lower is better)
Translates to: CRALICSPKTRN*LFSCGPWYSFS
Trigger: AGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCAATTTCTGGTCTTTGGGGAACAGATTAGTGCCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR-3UTR CAA 90 bp ACATGGTATGGGCTGGTCAAATGCAGGGCACTAATCTGTTCCCCAAAGACCAGATACATGAGCCTTGCTTaGTTGTCTCGTCTGCCAAGC +
Preference number: 3 (lower is better)
Translates to: TWYGLVKCRALICSPKTRYMSLA*LSRLPS
Trigger: GCTTGGCAGACGAGACAACAAAGCAAGGCTCATGTA...TCTGGTCTTTGGGGAACAGATTAGTGCCCTGCATTTGACCAGCCCATACCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR-3UTR CAA 90 bp CTCATGGTTCAGTGCCTGGAGAGTCCAGGGGTGTCAGCAGCCCCCAAGATTCCAGATCAGAAAAGTCTTTaGAGTCAGATATCTTCTCCT +
Preference number: 3 (lower is better)
Translates to: LMVQCLESPGVSAAPKIPDQKSL*SQISSP
Trigger: AGGAGAAGATATCTGACTCAAAAGACTTTTCTGATC...TGGAATCTTGGGGGCTGCTGACACCCCTGGACTCTCCAGGCACTGAACCATGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR CAA 90 bp CTCCAGGGTTTCCTATGTCCATTGAGGGAGTGTTTCTGGGATAAGAGGCTTCTTTCTAGACCAGCTCTGTaGCTTTTCACACCAGCGTGG +
Preference number: 3 (lower is better)
Translates to: LQGFLCPLRECFWDKRLLSRPAL*LFTPAW
Trigger: CCACGCTGGTGTGAAAAGCAACAGAGCTGGTCTAGA...AAGAAGCCTCTTATCCCAGAAACACTCCCTCAATGGACATAGGAAACCCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR TCA 72 bp AGAAGGCTAGAAGGATTGCCAGATTTAGAGTCCACATaGATGAATGGTGGGCTGCTAGTGGTGGCATGCTGG +
Preference number: 3 (lower is better)
Translates to: RRLEGLPDLEST*MNGGLLVVACW
Trigger: CCAGCATGCCACCACTAGCAGCCCACCATTCATTCATGTGGACTCTAAATCTGGCAATCCTTCTAGCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR TCA 72 bp ATCTTCCTGGTAGGTCTGTCCACCAAAAGGCCAGTTTaGTGGGTCACAGTCCACACCTCAAGTTCTACAGAA +
Preference number: 3 (lower is better)
Translates to: IFLVGLSTKRPV*WVTVHTSSSTE
Trigger: TTCTGTAGAACTTGAGGTGTGGACTGTGACCCATCAAACTGGCCTTTTGGTGGACAGACCTACCAGGAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR-3UTR CAA 90 bp TCTGTGTCTAGACCAGCTCTGTTGCTTTTCACACCAGCGTGGGTTTCAAGTCATGAACCAAAAGCACTCTaGACCAACAGGTTCTCCCAT +
Preference number: 3 (lower is better)
Translates to: SVSRPALLLFTPAWVSSHEPKAL*TNRFSH
Trigger: ATGGGAGAACCTGTTGGTCAAGAGTGCTTTTGGTTC...ATGACTTGAAACCCACGCTGGTGTGAAAAGCAACAGAGCTGGTCTAGACACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR CAA 90 bp TCTGTGTCTAGACCAGCTCTGTTGCTTTTCACACCAGCGTGGGTTTCAAGTCATGGAGTGCTGAAATATTaGGCCATGCGTCTGATTGTT +
Preference number: 3 (lower is better)
Translates to: SVSRPALLLFTPAWVSSHGVLKY*AMRLIV
Trigger: AACAATCAGACGCATGGCCAAATATTTCAGCACTCC...ATGACTTGAAACCCACGCTGGTGTGAAAAGCAACAGAGCTGGTCTAGACACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR CAA 90 bp ACATGGTATGGGCTGGTCAAATGCAGGGCACTAATCTGTTCCCCAAAGACCAGACTCACAATCTTCTCTTaGGCGTTGTTTACTTGTTCC +
Preference number: 3 (lower is better)
Translates to: TWYGLVKCRALICSPKTRLTIFS*ALFTCS
Trigger: GGAACAAGTAAACAACGCCAAAGAGAAGATTGTGAG...TCTGGTCTTTGGGGAACAGATTAGTGCCCTGCATTTGACCAGCCCATACCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR-3UTR CAA 90 bp CTCCAGGGTTTCCTATGTCCATTGAGGGAGTGTTTCTGGGATAAGAGGCTTCTTTTATTATGGTACCACTaGGACAGCACACACACAGCA +
Preference number: 3 (lower is better)
Translates to: LQGFLCPLRECFWDKRLLLLWYH*DSTHTA
Trigger: TGCTGTGTGTGTGCTGTCCAAGTGGTACCATAATAA...AAGAAGCCTCTTATCCCAGAAACACTCCCTCAATGGACATAGGAAACCCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR CCA 72 bp AGTACTCAAAGTAACACAGTGAGCCTAGCTGAAACATaGTATGGGCTGGTCAAATGCAGGGCACTAATCTGT +
Preference number: 3 (lower is better)
Translates to: STQSNTVSLAET*YGLVKCRALIC
Trigger: ACAGATTAGTGCCCTGCATTTGACCAGCCCATACCATGTTTCAGCTAGGCTCACTGTGTTACTTTGAGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR CCA 72 bp AAAAGACTCCTCTCGGGAGTCATTTCTCTTTTATTATaGTACCACTTGGACAGCACACACACAGCACAAGAA +
Preference number: 3 (lower is better)
Translates to: KRLLSGVISLLL*YHLDSTHTAQE
Trigger: TTCTTGTGCTGTGTGTGTGCTGTCCAAGTGGTACCATAATAAAAGAGAAATGACTCCCGAGAGGAGTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR TCA 72 bp CATCTGAATATATTAAGAGTTTTACAGAATGTAGGCTaGCCTGGACAGAAAATCCTATGTGTTCATTCAGCA +
Preference number: 3 (lower is better)
Translates to: HLNILRVLQNVG*PGQKILCVHSA
Trigger: TGCTGAATGAACACATAGGATTTTCTGTCCAGGTCAGCCTACATTCTGTAAAACTCTTAATATATTCAGATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp CTTGGGGCCCGGCCAGAACCAGAAGGCTGGCGAAGAAAGGCTGCTTTGCTCCCTTGTGAGCGGGCCCGCTaGGCTGCCCGCCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LGARPEPEGWRRKAALLPCERAR*AARLLL
Trigger: GAGGAGAAGGCGGGCAGCTCAGCGGGCCCGCTCACA...AGGGAGCAAAGCAGCCTTTCTTCGCCAGCCTTCTGGTTCTGGCCGGGCCCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR GCA 90 bp AGGCACAGCCTGAGGGCACTGGGGGCCACAGCTGCCACTGTTCAGGCAAGTCAGCAGTGGACCCAGGTGTaGTCTCCCTGTGGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: RHSLRALGATAATVQASQQWTQV*SPCGSG
Trigger: ACCAGAGCCACAGGGAGAGCACACCTGGGTCCACTG...CTGACTTGCCTGAACAGTGGCAGCTGTGGCCCCCAGTGCCCTCAGGCTGTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR CCA 90 bp AGGCACAGCCTGAGGGCACTGGGGGCCACAGCTGCCACTGTTCAGGCAAGTCAGCCCTCGGGCTCTGTCTaGCTTTGTTTGCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: RHSLRALGATAATVQASQPSGSV*LCLLPS
Trigger: GGAGGGCAGCAAACAAAGCCAGACAGAGCCCGAGGG...CTGACTTGCCTGAACAGTGGCAGCTGTGGCCCCCAGTGCCCTCAGGCTGTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR TCA 90 bp ACCAACAGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCATGTGAGCGGGCCCGCTaGGCTGCCCGCCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: TNRFSHTPTEIAGVCLPACERAR*AARLLL
Trigger: GAGGAGAAGGCGGGCAGCTCAGCGGGCCCGCTCACA...TGCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCTGTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp AGGGGAGAGATCTGGGAAGCCTGCGGGCGCATGGAGATCTGTCTCAGAGAGGAGAAGCGCCAAGCCCGCTaGTATGTGCAGGACGCCCAC +
Preference number: 4 (lower is better)
Translates to: RGEIWEACGRMEICLREEKRQAR*YVQDAH
Trigger: GTGGGCGTCCTGCACATAGCAGCGGGCTTGGCGCTT...CTCCTCTCTGAGACAGATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR TCA 90 bp TCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCATGTGAGCGGGCCCGCTaGGCTGCCCGCCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SPVGLGTASLGLTSVSRPCERAR*AARLLL
Trigger: GAGGAGAAGGCGGGCAGCTCAGCGGGCCCGCTCACA...TGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp GGTACATCCGATCCCAGGGGAGAGATCTGGGAAGCCTGCGGGCGCATGGAGATCTCTGGAGGCACTGGATaGGATCAGTCAGCACCCACG +
Preference number: 4 (lower is better)
Translates to: GTSDPRGEIWEACGRMEISGGTG*DQSAPT
Trigger: CGTGGGTGCTGACTGATCCCATCCAGTGCCTCCAGA...GATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTCCCCTGGGATCGGATGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR CCA 90 bp ACAGTCAGGACCTCAGGTACATCCGATCCCAGGGGAGAGATCTGGGAAGCCTGCGGCCCTGAAGTGCACTaGGAATCCCGGGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: TVRTSGTSDPRGEIWEACGPEVH*ESRAAM
Trigger: CATGGCTGCCCGGGATTCCCAGTGCACTTCAGGGCC...GCAGGCTTCCCAGATCTCTCCCCTGGGATCGGATGTACCTGAGGTCCTGACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp CTCATGGTTCAGTGCCTGGAGAGTCCAGGGGTGTCAGCAGCCCCCAAGATTCCAGGCCCTGAAGTGCACTaGGAATCCCGGGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: LMVQCLESPGVSAAPKIPGPEVH*ESRAAM
Trigger: CATGGCTGCCCGGGATTCCCAGTGCACTTCAGGGCC...TGGAATCTTGGGGGCTGCTGACACCCCTGGACTCTCCAGGCACTGAACCATGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR CCA 90 bp AGGCACAGCCTGAGGGCACTGGGGGCCACAGCTGCCACTGTTCAGGCAAGTCAGTCTGGTAGGAGACTCTaGCTGGGGTTCATGGGGACT +
Preference number: 4 (lower is better)
Translates to: RHSLRALGATAATVQASQSGRRL*LGFMGT
Trigger: AGTCCCCATGAACCCCAGCCAGAGTCTCCTACCAGA...CTGACTTGCCTGAACAGTGGCAGCTGTGGCCCCCAGTGCCCTCAGGCTGTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR TCA 90 bp TGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCAGAGCCAGGAAAGTGTaGGCGGGCCCGCTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: WLFSCGPWYSFSWTDLCVRARKV*AGPLSC
Trigger: GCAGCTCAGCGGGCCCGCTCACACTTTCCTGGCTCT...GACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp ACCAACAGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCAAGAGCCAGGAAAGTGTaGGCGGGCCCGCTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: TNRFSHTPTEIAGVCLPARARKV*AGPLSC
Trigger: GCAGCTCAGCGGGCCCGCTCACACTTTCCTGGCTCT...TGCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCTGTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp TCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAAGGCCCCTGAGCAGCTaGCAGGGTGTGGACCGAGGC +
Preference number: 4 (lower is better)
Translates to: SPVGLGTASLGLTSVSRPRPLSS*QGVDRG
Trigger: GCCTCGGTCCACACCCTGGCAGCTGCTCAGGGGCCT...TGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp TCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCGGGCCCGCTGAGCTaGCCGCCTTCTCCTCACCAT +
Preference number: 4 (lower is better)
Translates to: SPVGLGTASLGLTSVSRPAGPLS*PPSPHH
Trigger: ATGGTGAGGAGAAGGCGGGCAGCTCAGCGGGCCCGC...TGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp AGGGGAGAGATCTGGGAAGCCTGCGGGCGCATGGAGATCTGTCTCAGAGAGGAGAGGACAAGGGGACAGTaGGGACAGTCAGGACCTCAG +
Preference number: 4 (lower is better)
Translates to: RGEIWEACGRMEICLREERTRGQ*GQSGPQ
Trigger: CTGAGGTCCTGACTGTCCCCACTGTCCCCTTGTCCT...CTCCTCTCTGAGACAGATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp GTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTCTGGCTCCCCAGCTCCCTTaGGAGGTGCCAGTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: VGLGTASLGLTSVSRPALAPQLP*EVPVWP
Trigger: AGGCCACACTGGCACCTCCCAAGGGAGCTGGGGAGC...CAGAGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp AGGGGAGAGATCTGGGAAGCCTGCGGGCGCATGGAGATCTGTCTCAGAGAGGAGGCATCTTTTGGGGGCTaGAGGCAGCACTGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: RGEIWEACGRMEICLREEASFGG*RQHCSS
Trigger: GGAAGAACAGTGCTGCCTTCAGCCCCCAAAAGATGC...CTCCTCTCTGAGACAGATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp AGGCACAGCCTGAGGGCACTGGGGGCCACAGCTGCCACTGTTCAGGCAAGTCAGGCAGAAGAACTCATCTaGGCTGCTGGACTCAGTATC +
Preference number: 4 (lower is better)
Translates to: RHSLRALGATAATVQASQAEELI*AAGLSI
Trigger: GATACTGAGTCCAGCAGCTCAGATGAGTTCTTCTGC...CTGACTTGCCTGAACAGTGGCAGCTGTGGCCCCCAGTGCCCTCAGGCTGTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR TCA 90 bp TCCCCGCAGTACAAAACTGCATCAGTGGGTGAATCGAGGATGAGCCACAGGACAGCCCGGCAGCAGCTCTaGTGGCTTCTCTGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: SPQYKTASVGESRMSHRTARQQL*WLLWFP
Trigger: GGGGAACCAGAGAAGCCATCAGAGCTGCTGCCGGGC...TGTCCTGTGGCTCATCCTCGATTCACCCACTGATGCAGTTTTGTACTGCGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR GCA 90 bp AAATTGCTGGTGTGTGCCTCCCCGCAGTACAAAACTGCATCAGTGGGTGAATCGAGGCCCCTGAGCAGCTaGCAGGGTGTGGACCGAGGC +
Preference number: 4 (lower is better)
Translates to: KLLVCASPQYKTASVGESRPLSS*QGVDRG
Trigger: GCCTCGGTCCACACCCTGGCAGCTGCTCAGGGGCCT...CGATTCACCCACTGATGCAGTTTTGTACTGCGGGGAGGCACACACCAGCAATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp GTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTCTGAGGAGGGCCCTGAAGTaGACTGGGAATCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: VGLGTASLGLTSVSRPALRRALK*TGNPGQ
Trigger: CTGCCCGGGATTCCCAGTGCACTTCAGGGCCCTCCT...CAGAGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp ACAGTCAGGACCTCAGGTACATCCGATCCCAGGGGAGAGATCTGGGAAGCCTGCGTCCTGTTTGCCCGATaGCCCACAGATGAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: TVRTSGTSDPRGEIWEACVLFAR*PTDEGA
Trigger: TGCACCCTCATCTGTGGGGCATCGGGCAAACAGGAC...GCAGGCTTCCCAGATCTCTCCCCTGGGATCGGATGTACCTGAGGTCCTGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp CCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTTGGGGCAGCCCCCTCTaGGAGGTCATAGGTGCACTC +
Preference number: 4 (lower is better)
Translates to: PVGLGTASLGLTSVSRPAWGSPL*EVIGAL
Trigger: GAGTGCACCTATGACCTCCCAGAGGGGGCTGCCCCA...AGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp TGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTCCCTGGGGAGAAGCTaGAGTCCTTCCCAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: WLFSCGPWYSFSWTDLCVSLGRS*SPSQAP
Trigger: AGGGGCCTGGGAAGGACTCCAGCTTCTCCCCAGGGA...GACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp GGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTTCCCTGGGGAGAAGCTaGAGTCCTTCCCAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GSSPVGLGTASLGLTSVSSLGRS*SPSQAP
Trigger: AGGGGCCTGGGAAGGACTCCAGCTTCTCCCCAGGGA...AGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp ACAGTCAGGACCTCAGGTACATCCGATCCCAGGGGAGAGATCTGGGAAGCCTGCGGAATCAGTAGTTTGTaGGGCCAGGCTGGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: TVRTSGTSDPRGEIWEACGISSL*GQAGAV
Trigger: GACAGCCCCAGCCTGGCCCCACAAACTACTGATTCC...GCAGGCTTCCCAGATCTCTCCCCTGGGATCGGATGTACCTGAGGTCCTGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp CCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTGGCTTTGGAGAGGCATaGGGCAGCAGGACTTGGGGC +
Preference number: 4 (lower is better)
Translates to: PVGLGTASLGLTSVSRPAGFGEA*GSRTWG
Trigger: GCCCCAAGTCCTGCTGCCCCATGCCTCTCCAAAGCC...AGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp CCTCTTTCTGGTAGGAGACTCTGGCTGGGGTTCATGGGGACTTGGTCTCCTCTTGGCTTTGGAGAGGCATaGGGCAGCAGGACTTGGGGC +
Preference number: 4 (lower is better)
Translates to: PLSGRRLWLGFMGTWSPLGFGEA*GSRTWG
Trigger: GCCCCAAGTCCTGCTGCCCCATGCCTCTCCAAAGCC...AAGAGGAGACCAAGTCCCCATGAACCCCAGCCAGAGTCTCCTACCAGAAAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR CCA 90 bp TCCCTGGGAAAACCCACCTACTTGAGTCCCAGGAGCTGTGTGTACATCTCTGTCCCCAGGGGAGAGATCTaGGAAGCCTGCGGGCGCATG +
Preference number: 4 (lower is better)
Translates to: SLGKPTYLSPRSCVYISVPRGEI*EACGRM
Trigger: CATGCGCCCGCAGGCTTCCCAGATCTCTCCCCTGGG...GACAGAGATGTACACACAGCTCCTGGGACTCAAGTAGGTGGGTTTTCCCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp ACAGTCAGGACCTCAGGTACATCCGATCCCAGGGGAGAGATCTGGGAAGCCTGCTCCAGGAGGGCCTCATaGTTCAGTGCCTGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: TVRTSGTSDPRGEIWEACSRRAS*FSAWRV
Trigger: GACTCTCCAGGCACTGAACCATGAGGCCCTCCTGGA...GCAGGCTTCCCAGATCTCTCCCCTGGGATCGGATGTACCTGAGGTCCTGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR CCA 90 bp CTTGGGGCCCGGCCAGAACCAGAAGGCTGGCGAAGAAAGGCTGCTTTGCTCCCTGTCCACATGAATGAATaGTGGGCTGCTAGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: LGARPEPEGWRRKAALLPVHMNE*WAASGG
Trigger: GCCACCACTAGCAGCCCACCATTCATTCATGTGGAC...AGGGAGCAAAGCAGCCTTTCTTCGCCAGCCTTCTGGTTCTGGCCGGGCCCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR TCA 90 bp ACAGTCAGGACCTCAGGTACATCCGATCCCAGGGGAGAGATCTGGGAAGCCTGCGTCTTGCAGAGATCATaGAGGGGTCTCCGATCCAGC +
Preference number: 4 (lower is better)
Translates to: TVRTSGTSDPRGEIWEACVLQRS*RGLRSS
Trigger: GCTGGATCGGAGACCCCTTCATGATCTCTGCAAGAC...GCAGGCTTCCCAGATCTCTCCCCTGGGATCGGATGTACCTGAGGTCCTGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp GGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTCCGATGCCCCACAGATaGGGGTGCAGAGCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: GSSPVGLGTASLGLTSVSPMPHR*GCRARK
Trigger: TTTCCTGGCTCTGCACCCTCATCTGTGGGGCATCGG...AGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp AGGGGAGAGATCTGGGAAGCCTGCGGGCGCATGGAGATCTGTCTCAGAGAGGAGCAGCTTCTCTTGGACTaGCCTCTGTGTCTAGACCAG +
Preference number: 4 (lower is better)
Translates to: RGEIWEACGRMEICLREEQLLLD*PLCLDQ
Trigger: CTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTG...CTCCTCTCTGAGACAGATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp ACATGGTATGGGCTGGTCAAATGCAGGGCACTAATCTGTTCCCCAAAGACCAGAAGGCCCCTGAGCAGCTaGCAGGGTGTGGACCGAGGC +
Preference number: 4 (lower is better)
Translates to: TWYGLVKCRALICSPKTRRPLSS*QGVDRG
Trigger: GCCTCGGTCCACACCCTGGCAGCTGCTCAGGGGCCT...TCTGGTCTTTGGGGAACAGATTAGTGCCCTGCATTTGACCAGCCCATACCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp TCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAAGGAGGGCCCTGAAGTaGACTGGGAATCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: SPVGLGTASLGLTSVSRPRRALK*TGNPGQ
Trigger: CTGCCCGGGATTCCCAGTGCACTTCAGGGCCCTCCT...TGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp GTCCCTGGGAAAACCCACCTACTTGAGTCCCAGGAGCTGTGTGTACATCTCTGTAGGAGGGCCCTGAAGTaGACTGGGAATCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: VPGKTHLLESQELCVHLCRRALK*TGNPGQ
Trigger: CTGCCCGGGATTCCCAGTGCACTTCAGGGCCCTCCT...ACAGAGATGTACACACAGCTCCTGGGACTCAAGTAGGTGGGTTTTCCCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp CAAAGACCAGAAATTGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGAGCGGGCCCGCTGAGCTaGCCGCCTTCTCCTCACCAT +
Preference number: 4 (lower is better)
Translates to: QRPEIGSSPVGLGTASLGAGPLS*PPSPHH
Trigger: ATGGTGAGGAGAAGGCGGGCAGCTCAGCGGGCCCGC...TCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCAATTTCTGGTCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp GGTACATCCGATCCCAGGGGAGAGATCTGGGAAGCCTGCGGGCGCATGGAGATCGAAATTGCTGGTGTGTaGCTCCCCGCAGTACAAAAC +
Preference number: 4 (lower is better)
Translates to: GTSDPRGEIWEACGRMEIEIAGV*LPAVQN
Trigger: GTTTTGTACTGCGGGGAGGCACACACCAGCAATTTC...GATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTCCCCTGGGATCGGATGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp CCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTGGCCTCATGGTTCAGTaGCTGGAGAGTCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: PVGLGTASLGLTSVSRPAGLMVQ*LESPGV
Trigger: CACCCCTGGACTCTCCAGGCACTGAACCATGAGGCC...AGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR CCA 90 bp TCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGAGACAAGAGGGGGCGGTaGAGAGGGAAGCCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: SSPVGLGTASLGLTSVSRDKRGR*RGKPQG
Trigger: GCCCTGAGGCTTCCCTCTCCACCGCCCCCTCTTGTC...TCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp AAATTGCTGGTGTGTGCCTCCCCGCAGTACAAAACTGCATCAGTGGGTGAATCGGACAAGAGGGGGCGGTaGAGAGGGAAGCCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: KLLVCASPQYKTASVGESDKRGR*RGKPQG
Trigger: GCCCTGAGGCTTCCCTCTCCACCGCCCCCTCTTGTC...CGATTCACCCACTGATGCAGTTTTGTACTGCGGGGAGGCACACACCAGCAATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp GTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTCTGCCCTCGGGCTCTGTCTaGCTTTGTTTGCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: VGLGTASLGLTSVSRPALPSGSV*LCLLPS
Trigger: GGAGGGCAGCAAACAAAGCCAGACAGAGCCCGAGGG...CAGAGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp GACCAACAGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCAAGCCTGCGGGCGCATaGAGATCTGTCTCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: DQQVLPYPNRNCWCVPPRKPAGA*RSVSER
Trigger: CCTCTCTGAGACAGATCTCCATGCGCCCGCAGGCTT...GCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCTGTTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp ACAGTCAGGACCTCAGGTACATCCGATCCCAGGGGAGAGATCTGGGAAGCCTGCCCCAACAGAAATTGCTaGTGTGTGCCTCCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: TVRTSGTSDPRGEIWEACPNRNC*CVPPRS
Trigger: ACTGCGGGGAGGCACACACCAGCAATTTCTGTTGGG...GCAGGCTTCCCAGATCTCTCCCCTGGGATCGGATGTACCTGAGGTCCTGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp TGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCCTAGTGGTGGCATGCTaGGAGGAAGGGAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: WLFSCGPWYSFSWTDLCVLVVAC*EEGSCR
Trigger: CCTGCAGCTCCCTTCCTCCCAGCATGCCACCACTAG...GACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR TCA 90 bp TCCCCGCAGTACAAAACTGCATCAGTGGGTGAATCGAGGATGAGCCACAGGACACCGATGCCCCACAGATaGGGGTGCAGAGCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: SPQYKTASVGESRMSHRTPMPHR*GCRARK
Trigger: TTTCCTGGCTCTGCACCCTCATCTGTGGGGCATCGG...TGTCCTGTGGCTCATCCTCGATTCACCCACTGATGCAGTTTTGTACTGCGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp ACAGTCAGGACCTCAGGTACATCCGATCCCAGGGGAGAGATCTGGGAAGCCTGCTCCCAGAAGAACACATaGAGCCATGTGTCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: TVRTSGTSDPRGEIWEACSQKNT*SHVSLG
Trigger: TCCCAGGGACACATGGCTTCATGTGTTCTTCTGGGA...GCAGGCTTCCCAGATCTCTCCCCTGGGATCGGATGTACCTGAGGTCCTGACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp GTCCCTGGGAAAACCCACCTACTTGAGTCCCAGGAGCTGTGTGTACATCTCTGTTGGAGGCCCGTTTCCTaGGGTGAGGACCCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: VPGKTHLLESQELCVHLCWRPVS*GEDPGL
Trigger: TAGACCTGGGTCCTCACCTCAGGAAACGGGCCTCCA...ACAGAGATGTACACACAGCTCCTGGGACTCAAGTAGGTGGGTTTTCCCAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp TCTGTGTCTAGACCAGCTCTGTTGCTTTTCACACCAGCGTGGGTTTCAAGTCATGCGGGCCCGCTGAGCTaGCCGCCTTCTCCTCACCAT +
Preference number: 4 (lower is better)
Translates to: SVSRPALLLFTPAWVSSHAGPLS*PPSPHH
Trigger: ATGGTGAGGAGAAGGCGGGCAGCTCAGCGGGCCCGC...ATGACTTGAAACCCACGCTGGTGTGAAAAGCAACAGAGCTGGTCTAGACACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR GCA 90 bp GACCAACAGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCGGGCTGTCCCCATTCTaGACATGTAGCCTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: DQQVLPYPNRNCWCVPPRGLSPF*TCSLLC
Trigger: ACACAGCAGGCTACATGTGCAGAATGGGGACAGCCC...GCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCTGTTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp GTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTCTGCTGGCGAAGAAAGGCTaGTTTGCTCCCTCTAGCCCC +
Preference number: 4 (lower is better)
Translates to: VGLGTASLGLTSVSRPALLAKKG*FAPSSP
Trigger: GGGGCTAGAGGGAGCAAAGCAGCCTTTCTTCGCCAG...CAGAGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp ACCAACAGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCACTGGCGAAGAAAGGCTaGTTTGCTCCCTCTAGCCCC +
Preference number: 4 (lower is better)
Translates to: TNRFSHTPTEIAGVCLPALAKKG*FAPSSP
Trigger: GGGGCTAGAGGGAGCAAAGCAGCCTTTCTTCGCCAG...TGCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCTGTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp ACATGGTATGGGCTGGTCAAATGCAGGGCACTAATCTGTTCCCCAAAGACCAGAAAGCCCGCTGCTATGTaGAGGACGCCCACGGTCCCC +
Preference number: 4 (lower is better)
Translates to: TWYGLVKCRALICSPKTRKPAAM*RTPTVP
Trigger: GGGGACCGTGGGCGTCCTGCACATAGCAGCGGGCTT...TCTGGTCTTTGGGGAACAGATTAGTGCCCTGCATTTGACCAGCCCATACCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR GCA 90 bp GAGAGATCTGGGAAGCCTGCGGGCGCATGGAGATCTGTCTCAGAGAGGAGGGTACTGCCAAGCGTCACCTaGCATTCCCAGAAGAACACA +
Preference number: 4 (lower is better)
Translates to: ERSGKPAGAWRSVSERRVLPSVT*HSQKNT
Trigger: TGTGTTCTTCTGGGAATGGCAGGTGACGCTTGGCAG...TACCCTCCTCTCTGAGACAGATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp CCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTTTCTCTCCCCTCGGGTaGCAGTTCTCCTCCTCACCA +
Preference number: 4 (lower is better)
Translates to: PVGLGTASLGLTSVSRPAFSPLG*QFSSSP
Trigger: TGGTGAGGAGGAGAACTGCCACCCGAGGGGAGAGAA...AGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp AGTTCTCCAGATGCCTCTGTCTCTGGGGATCTGAGCCGCCTCTTTCTGGTAGGATTCTCTCCCCTCGGGTaGCAGTTCTCCTCCTCACCA +
Preference number: 4 (lower is better)
Translates to: SSPDASVSGDLSRLFLVGFSPLG*QFSSSP
Trigger: TGGTGAGGAGGAGAACTGCCACCCGAGGGGAGAGAA...TCCTACCAGAAAGAGGCGGCTCAGATCCCCAGAGACAGAGGCATCTGGAGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR CCA 90 bp TCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGAGGCCCTGAAGTGCACTaGGAATCCCGGGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: SSPVGLGTASLGLTSVSRGPEVH*ESRAAM
Trigger: CATGGCTGCCCGGGATTCCCAGTGCACTTCAGGGCC...TCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp GACCAACAGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCAGATGCCTCTGTCTCTaGGGATCTGAGCCGCCTCTT +
Preference number: 4 (lower is better)
Translates to: DQQVLPYPNRNCWCVPPRRCLCL*GSEPPL
Trigger: AAGAGGCGGCTCAGATCCCCAGAGACAGAGGCATCT...GCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCTGTTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp TGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCGGAATCAGTAGTTTGTaGGGCCAGGCTGGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: WLFSCGPWYSFSWTDLCVGISSL*GQAGAV
Trigger: GACAGCCCCAGCCTGGCCCCACAAACTACTGATTCC...GACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp AAATTGCTGGTGTGTGCCTCCCCGCAGTACAAAACTGCATCAGTGGGTGAATCGGGCTTTGGAGAGGCATaGGGCAGCAGGACTTGGGGC +
Preference number: 4 (lower is better)
Translates to: KLLVCASPQYKTASVGESGFGEA*GSRTWG
Trigger: GCCCCAAGTCCTGCTGCCCCATGCCTCTCCAAAGCC...CGATTCACCCACTGATGCAGTTTTGTACTGCGGGGAGGCACACACCAGCAATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp GTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTCTGAAGCCTGCGGGCGCATaGAGATCTGTCTCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: VGLGTASLGLTSVSRPALKPAGA*RSVSER
Trigger: CCTCTCTGAGACAGATCTCCATGCGCCCGCAGGCTT...CAGAGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp GTCCCTGGGAAAACCCACCTACTTGAGTCCCAGGAGCTGTGTGTACATCTCTGTGGTGTGCTCTCCCTGTaGCTCTGGTGGTGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: VPGKTHLLESQELCVHLCGVLSL*LWWWLS
Trigger: ACTCAGCCACCACCAGAGCCACAGGGAGAGCACACC...ACAGAGATGTACACACAGCTCCTGGGACTCAAGTAGGTGGGTTTTCCCAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp TCCCTGGGAAAACCCACCTACTTGAGTCCCAGGAGCTGTGTGTACATCTCTGTCTTCCCCTTCTTTGGGTaGGTCAGCCTTCTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: SLGKPTYLSPRSCVYISVFPFFG*VSLLRA
Trigger: GGCCCGGAGAAGGCTGACCCACCCAAAGAAGGGGAA...GACAGAGATGTACACACAGCTCCTGGGACTCAAGTAGGTGGGTTTTCCCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR CCA 90 bp CCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTCTGGTTCCCCTTCTTTaGGTGGGTCAGCCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: PVGLGTASLGLTSVSRPALVPLL*VGQPSP
Trigger: CGGAGAAGGCTGACCCACCCAAAGAAGGGGAACCAG...AGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR TCA 90 bp GTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTCTGGTCTTGCAGAGATCATaGAGGGGTCTCCGATCCAGC +
Preference number: 4 (lower is better)
Translates to: VGLGTASLGLTSVSRPALVLQRS*RGLRSS
Trigger: GCTGGATCGGAGACCCCTTCATGATCTCTGCAAGAC...CAGAGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp GGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTTCAGCACCCACGTCATaGGCAGGATCACATCAGCCA +
Preference number: 4 (lower is better)
Translates to: GSSPVGLGTASLGLTSVSSAPTS*AGSHQP
Trigger: TGGCTGATGTGATCCTGCTCATGACGTGGGTGCTGA...AGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS-3UTR TCA 90 bp GTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTCTGTCAGCACCCACGTCATaGGCAGGATCACATCAGCCA +
Preference number: 4 (lower is better)
Translates to: VGLGTASLGLTSVSRPALSAPTS*AGSHQP
Trigger: TGGCTGATGTGATCCTGCTCATGACGTGGGTGCTGA...CAGAGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS-3UTR TCA 90 bp GAGAGATCTGGGAAGCCTGCGGGCGCATGGAGATCTGTCTCAGAGAGGAGGGTACCTTGCATCCCCAAATaGGAGCAATCCAAACATCGG +
Preference number: 4 (lower is better)
Translates to: ERSGKPAGAWRSVSERRVPCIPK*EQSKHR
Trigger: CCGATGTTTGGATTGCTCTCATTTGGGGATGCAAGG...TACCCTCCTCTCTGAGACAGATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR TCA 90 bp CTTGGGGCCCGGCCAGAACCAGAAGGCTGGCGAAGAAAGGCTGCTTTGCTCCCTTTTTGTTGGGAGTGCTaGAATATTTGGCCATGCGTC +
Preference number: 4 (lower is better)
Translates to: LGARPEPEGWRRKAALLPFCWEC*NIWPCV
Trigger: GACGCATGGCCAAATATTTCAGCACTCCCAACAAAA...AGGGAGCAAAGCAGCCTTTCTTCGCCAGCCTTCTGGTTCTGGCCGGGCCCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR TCA 90 bp TCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACTCTGGGGGCTCCTCTaGGTTCTCCAGATGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SSPVGLGTASLGLTSVSRLWGLL*VLQMPL
Trigger: CAGAGGCATCTGGAGAACTCAGAGGAGCCCCCAGAG...TCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp GTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTCTGGCATCTTTTGGGGGCTaGAGGCAGCACTGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: VGLGTASLGLTSVSRPALASFGG*RQHCSS
Trigger: GGAAGAACAGTGCTGCCTTCAGCCCCCAAAAGATGC...CAGAGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp TGGAGATCTGTCTCAGAGAGGAGGGTAAAGTGCCATAATGGTGGAAAGACACCAAGAGCCAGGAAAGTGTaGGCGGGCCCGCTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: WRSVSERRVKCHNGGKTPRARKV*AGPLSC
Trigger: GCAGCTCAGCGGGCCCGCTCACACTTTCCTGGCTCT...TGGTGTCTTTCCACCATTATGGCACTTTACCCTCCTCTCTGAGACAGATCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp AAATTGCTGGTGTGTGCCTCCCCGCAGTACAAAACTGCATCAGTGGGTGAATCGCCGATGCCCCACAGATaGGGGTGCAGAGCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: KLLVCASPQYKTASVGESPMPHR*GCRARK
Trigger: TTTCCTGGCTCTGCACCCTCATCTGTGGGGCATCGG...CGATTCACCCACTGATGCAGTTTTGTACTGCGGGGAGGCACACACCAGCAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp CCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTTTCAGGCAAGTCAGGTaGGGCTTTGGAGAGGCATGG +
Preference number: 4 (lower is better)
Translates to: PVGLGTASLGLTSVSRPAFRQVR*GFGEAW
Trigger: CCATGCCTCTCCAAAGCCTCACCTGACTTGCCTGAA...AGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp AGTTCTCCAGATGCCTCTGTCTCTGGGGATCTGAGCCGCCTCTTTCTGGTAGGATTCAGGCAAGTCAGGTaGGGCTTTGGAGAGGCATGG +
Preference number: 4 (lower is better)
Translates to: SSPDASVSGDLSRLFLVGFRQVR*GFGEAW
Trigger: CCATGCCTCTCCAAAGCCTCACCTGACTTGCCTGAA...TCCTACCAGAAAGAGGCGGCTCAGATCCCCAGAGACAGAGGCATCTGGAGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR TCA 90 bp AAATTGCTGGTGTGTGCCTCCCCGCAGTACAAAACTGCATCAGTGGGTGAATCGGGCTCTGGTGGTGGCTaGGTTCCTCGCACTCATCCT +
Preference number: 4 (lower is better)
Translates to: KLLVCASPQYKTASVGESGSGGG*VPRTHP
Trigger: AGGATGAGTGCGAGGAACTCAGCCACCACCAGAGCC...CGATTCACCCACTGATGCAGTTTTGTACTGCGGGGAGGCACACACCAGCAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp AGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCAGTACAACTGGGATTACAGACGTaGGCCACTGCTTCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: RFSHTPTEIAGVCLPAVQLGLQT*ATASSP
Trigger: TGGGCTGGAAGCAGTGGCTCACGTCTGTAATCCCAG...TTGTACTGCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR GCA 90 bp TCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGGGTGCTGGTCGAAGTaGAGGACACGTCTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: SPVGLGTASLGLTSVSRPGCWSK*RTRLSL
Trigger: CAGGGAAAGACGTGTCCTGCACTTCGACCAGCACCC...TGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS-3UTR GCA 90 bp ACAGTCAGGACCTCAGGTACATCCGATCCCAGGGGAGAGATCTGGGAAGCCTGCAATCCCGGGCAGCCATaGCAGGATCATTCTGAAAGT +
Preference number: 4 (lower is better)
Translates to: TVRTSGTSDPRGEIWEACNPGQP*QDHSES
Trigger: ACTTTCAGAATGATCCTGGCATGGCTGCCCGGGATT...GCAGGCTTCCCAGATCTCTCCCCTGGGATCGGATGTACCTGAGGTCCTGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp GTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTCTGTCTGGACCCAGGCTTTaGTCAGTCCATGGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: VGLGTASLGLTSVSRPALSGPRL*SVHGFW
Trigger: CCAGAAGCCATGGACTGAGCAAAGCCTGGGTCCAGA...CAGAGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp TCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGTCCTGTTTGCCCGATaGCCCACAGATGAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: SPVGLGTASLGLTSVSRPVLFAR*PTDEGA
Trigger: TGCACCCTCATCTGTGGGGCATCGGGCAAACAGGAC...TGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp TCCCCGCAGTACAAAACTGCATCAGTGGGTGAATCGAGGATGAGCCACAGGACAGTCCTGTTTGCCCGATaGCCCACAGATGAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: SPQYKTASVGESRMSHRTVLFAR*PTDEGA
Trigger: TGCACCCTCATCTGTGGGGCATCGGGCAAACAGGAC...TGTCCTGTGGCTCATCCTCGATTCACCCACTGATGCAGTTTTGTACTGCGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp TGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTCTGCACATGTAGCCTaGTGTGTGCCCCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: WLFSCGPWYSFSWTDLCVSAHVA*CVPQEQ
Trigger: CTGTTCCTGGGGCACACAGCAGGCTACATGTGCAGA...GACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp CCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTGGGCTGTCCCCATTCTaGACATGTAGCCTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: PVGLGTASLGLTSVSRPAGLSPF*TCSLLC
Trigger: ACACAGCAGGCTACATGTGCAGAATGGGGACAGCCC...AGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp TCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAACTGGGGGCCACAGCTaGCACTGTTCAGGCAAGTCA +
Preference number: 4 (lower is better)
Translates to: SPVGLGTASLGLTSVSRPTGGHS*HCSGKS
Trigger: TGACTTGCCTGAACAGTGGCAGCTGTGGCCCCCAGT...TGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp CCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTCTTCAACTGGTCCCCTaGTGCGAGTGCATGCCATGT +
Preference number: 4 (lower is better)
Translates to: PVGLGTASLGLTSVSRPALQLVP*CECMPC
Trigger: ACATGGCATGCACTCGCAGCAGGGGACCAGTTGAAG...AGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR GCA 90 bp AGGGGAGAGATCTGGGAAGCCTGCGGGCGCATGGAGATCTGTCTCAGAGAGGAGTATGGGCTGGTCAAATaGAGGGCACTAATCTGTTCC +
Preference number: 4 (lower is better)
Translates to: RGEIWEACGRMEICLREEYGLVK*RALICS
Trigger: GGAACAGATTAGTGCCCTGCATTTGACCAGCCCATA...CTCCTCTCTGAGACAGATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp ACTTGGGGCCCGGCCAGAACCAGAAGGCTGGCGAAGAAAGGCTGCTTTGCTCCCTGGAATCTAGGGAGGTaGTGTTCACAACATTCAGCA +
Preference number: 4 (lower is better)
Translates to: TWGPARTRRLAKKGCFAPWNLGR*CSQHSA
Trigger: TGCTGAATGTTGTGAACAGCACCTCCCTAGATTCCA...GGGAGCAAAGCAGCCTTTCTTCGCCAGCCTTCTGGTTCTGGCCGGGCCCCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR GCA 90 bp GTCCCTGGGAAAACCCACCTACTTGAGTCCCAGGAGCTGTGTGTACATCTCTGTGAGATCTGGGAAGCCTaGGGGCGCATGGAGATCTGT +
Preference number: 4 (lower is better)
Translates to: VPGKTHLLESQELCVHLCEIWEA*GRMEIC
Trigger: ACAGATCTCCATGCGCCCGCAGGCTTCCCAGATCTC...ACAGAGATGTACACACAGCTCCTGGGACTCAAGTAGGTGGGTTTTCCCAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp AGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCAGTACAAGAGATCTGGGAAGCCTaGGGGCGCATGGAGATCTGT +
Preference number: 4 (lower is better)
Translates to: RFSHTPTEIAGVCLPAVQEIWEA*GRMEIC
Trigger: ACAGATCTCCATGCGCCCGCAGGCTTCCCAGATCTC...TTGTACTGCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp GGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTCTCCGATCCAGCTCCTaGCCAGGAAAACTGTCACAC +
Preference number: 4 (lower is better)
Translates to: GSSPVGLGTASLGLTSVSLRSSS*PGKLSH
Trigger: GTGTGACAGTTTTCCTGGCCAGGAGCTGGATCGGAG...AGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp TGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCCACAGAAGTGGGTGCTaGTCGAAGTGCAGGACACGT +
Preference number: 4 (lower is better)
Translates to: WLFSCGPWYSFSWTDLCVHRSGC*SKCRTR
Trigger: ACGTGTCCTGCACTTCGACCAGCACCCACTTCTGTG...GACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS-3UTR CCA 90 bp TCCCCGCAGTACAAAACTGCATCAGTGGGTGAATCGAGGATGAGCCACAGGACATTCTCTCCCCTCGGGTaGCAGTTCTCCTCCTCACCA +
Preference number: 4 (lower is better)
Translates to: SPQYKTASVGESRMSHRTFSPLG*QFSSSP
Trigger: TGGTGAGGAGGAGAACTGCCACCCGAGGGGAGAGAA...TGTCCTGTGGCTCATCCTCGATTCACCCACTGATGCAGTTTTGTACTGCGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp CAAAGACCAGAAATTGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGATGGGGCAGCCCCCTCTaGGAGGTCATAGGTGCACTC +
Preference number: 4 (lower is better)
Translates to: QRPEIGSSPVGLGTASLGWGSPL*EVIGAL
Trigger: GAGTGCACCTATGACCTCCCAGAGGGGGCTGCCCCA...TCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCAATTTCTGGTCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp TCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGAACCGAGGCTACCGCCTaGACGTCCTTGTTCGGGGAA +
Preference number: 4 (lower is better)
Translates to: SSPVGLGTASLGLTSVSRTEATA*TSLFGE
Trigger: TTCCCCGAACAAGGACGTCCAGGCGGTAGCCTCGGT...TCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp AGTTCTCCAGATGCCTCTGTCTCTGGGGATCTGAGCCGCCTCTTTCTGGTAGGAGGGTTCATGGGGACTTaGTCTCCTCTTTCTGGACCC +
Preference number: 4 (lower is better)
Translates to: SSPDASVSGDLSRLFLVGGFMGT*SPLSGP
Trigger: GGGTCCAGAAAGAGGAGACCAAGTCCCCATGAACCC...TCCTACCAGAAAGAGGCGGCTCAGATCCCCAGAGACAGAGGCATCTGGAGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR CCA 90 bp GGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTTCTGGTAGGAGACTCTaGCTGGGGTTCATGGGGACT +
Preference number: 4 (lower is better)
Translates to: GSSPVGLGTASLGLTSVSSGRRL*LGFMGT
Trigger: AGTCCCCATGAACCCCAGCCAGAGTCTCCTACCAGA...AGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp CCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTAGATGCCTCTGTCTCTaGGGATCTGAGCCGCCTCTT +
Preference number: 4 (lower is better)
Translates to: PVGLGTASLGLTSVSRPARCLCL*GSEPPL
Trigger: AAGAGGCGGCTCAGATCCCCAGAGACAGAGGCATCT...AGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp GGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGATGCCTCTGTCTCTaGGGATCTGAGCCGCCTCTT +
Preference number: 4 (lower is better)
Translates to: GSSPVGLGTASLGLTSVSRCLCL*GSEPPL
Trigger: AAGAGGCGGCTCAGATCCCCAGAGACAGAGGCATCT...AGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp TCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCCTCGGGCTCTGTCTaGCTTTGTTTGCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SSPVGLGTASLGLTSVSRPSGSV*LCLLPS
Trigger: GGAGGGCAGCAAACAAAGCCAGACAGAGCCCGAGGG...TCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp GGTACATCCGATCCCAGGGGAGAGATCTGGGAAGCCTGCGGGCGCATGGAGATCGCTTATTCACAGTCTTaGTTACCCACTGGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: GTSDPRGEIWEACGRMEIAYSQS*LPTGRD
Trigger: ATCCCTACCAGTGGGTAACCAAGACTGTGAATAAGC...GATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTCCCCTGGGATCGGATGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR CCA 90 bp GGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTGGTCTGGCCAGAAGCTaGAATCTAGGGAGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: GSSPVGLGTASLGLTSVSGLARS*NLGRCC
Trigger: ACAGCACCTCCCTAGATTCCAGCTTCTGGCCAGACC...AGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp GTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTCTGCCCAACAGAAATTGCTaGTGTGTGCCTCCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: VGLGTASLGLTSVSRPALPNRNC*CVPPRS
Trigger: ACTGCGGGGAGGCACACACCAGCAATTTCTGTTGGG...CAGAGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp AAATTGCTGGTGTGTGCCTCCCCGCAGTACAAAACTGCATCAGTGGGTGAATCGTCCCTGTGGCTCTGGTaGTGGCTGAGTTCCTCGCAC +
Preference number: 4 (lower is better)
Translates to: KLLVCASPQYKTASVGESSLWLW*WLSSSH
Trigger: GTGCGAGGAACTCAGCCACCACCAGAGCCACAGGGA...CGATTCACCCACTGATGCAGTTTTGTACTGCGGGGAGGCACACACCAGCAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp ACTTGGGGCCCGGCCAGAACCAGAAGGCTGGCGAAGAAAGGCTGCTTTGCTCCCTTGAGGGAGTGTTTCTaGGATAAGAGGCTTCTTAGG +
Preference number: 4 (lower is better)
Translates to: TWGPARTRRLAKKGCFAPLRECF*DKRLLR
Trigger: CCTAAGAAGCCTCTTATCCCAGAAACACTCCCTCAA...GGGAGCAAAGCAGCCTTTCTTCGCCAGCCTTCTGGTTCTGGCCGGGCCCCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR TCA 90 bp TCCCTGGGAAAACCCACCTACTTGAGTCCCAGGAGCTGTGTGTACATCTCTGTCGTCTTGCAGAGATCATaGAGGGGTCTCCGATCCAGC +
Preference number: 4 (lower is better)
Translates to: SLGKPTYLSPRSCVYISVVLQRS*RGLRSS
Trigger: GCTGGATCGGAGACCCCTTCATGATCTCTGCAAGAC...GACAGAGATGTACACACAGCTCCTGGGACTCAAGTAGGTGGGTTTTCCCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp GTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTCTGCTTTCCCTGTCACACTaGGAATCTGGAGGCACTGGA +
Preference number: 4 (lower is better)
Translates to: VGLGTASLGLTSVSRPALLSLSH*ESGGTG
Trigger: TCCAGTGCCTCCAGATTCTCAGTGTGACAGGGAAAG...CAGAGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461057.1
CDS-3UTR TCA 90 bp TGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCAGATCCCTCCAGATGTaGGTCCAAAGACCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: WLFSCGPWYSFSWTDLCVRSLQM*VQRPGW
Trigger: CCAACCTGGTCTTTGGACTCACATCTGGAGGGATCT...GACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS-3UTR TCA 90 bp TGTCCACCAAAAGGCCAGTTTGATGGGTCACAGTCCACACCTCAAGTTCTACAGCTCTGGGGGCTCCTCTaGGTTCTCCAGATGCCTCTG +
Preference number: 4 (lower is better)
Translates to: CPPKGQFDGSQSTPQVLQLWGLL*VLQMPL
Trigger: CAGAGGCATCTGGAGAACTCAGAGGAGCCCCCAGAG...CTGTAGAACTTGAGGTGTGGACTGTGACCCATCAAACTGGCCTTTTGGTGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp CTTGGGGCCCGGCCAGAACCAGAAGGCTGGCGAAGAAAGGCTGCTTTGCTCCCTTCTTGTAAGACCTCCTaGAGTTTCTCCCTGATTACT +
Preference number: 4 (lower is better)
Translates to: LGARPEPEGWRRKAALLPSCKTS*SFSLIT
Trigger: AGTAATCAGGGAGAAACTTCAGGAGGTCTTACAAGA...AGGGAGCAAAGCAGCCTTTCTTCGCCAGCCTTCTGGTTCTGGCCGGGCCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR TCA 90 bp GTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTCTGCTCAGGGTCAGTGTCTaGTGTGCCACTGTCACTAGA +
Preference number: 4 (lower is better)
Translates to: VGLGTASLGLTSVSRPALLRVSV*CATVTR
Trigger: TCTAGTGACAGTGGCACATCAGACACTGACCCTGAG...CAGAGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp GTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTCTGCAGCTTCTCTTGGACTaGCCTCTGTGTCTAGACCAG +
Preference number: 4 (lower is better)
Translates to: VGLGTASLGLTSVSRPALQLLLD*PLCLDQ
Trigger: CTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTG...CAGAGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp CCTCTTTCTGGTAGGAGACTCTGGCTGGGGTTCATGGGGACTTGGTCTCCTCTTCAGCTTCTCTTGGACTaGCCTCTGTGTCTAGACCAG +
Preference number: 4 (lower is better)
Translates to: PLSGRRLWLGFMGTWSPLQLLLD*PLCLDQ
Trigger: CTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTG...AAGAGGAGACCAAGTCCCCATGAACCCCAGCCAGAGTCTCCTACCAGAAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR TCA 90 bp TGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCAACTGCATCAGTGGGTaGATCGAGGATGAGCCACAG +
Preference number: 4 (lower is better)
Translates to: WLFSCGPWYSFSWTDLCVNCISG*IEDEPQ
Trigger: CTGTGGCTCATCCTCGATTCACCCACTGATGCAGTT...GACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp GGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTCTCTGTCCAGCAGTGTaGTGTTGCGGGAAACTACCT +
Preference number: 4 (lower is better)
Translates to: GSSPVGLGTASLGLTSVSLCPAV*CCGKLP
Trigger: AGGTAGTTTCCCGCAACATCACACTGCTGGACAGAG...AGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp TCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGATGTGGCCTTTGGCAGTaGGGAAGTGGAGGCCCGTTT +
Preference number: 4 (lower is better)
Translates to: SSPVGLGTASLGLTSVSRCGLWQ*GSGGPF
Trigger: AAACGGGCCTCCACTTCCTCACTGCCAAAGGCCACA...TCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp CCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTCAAGGGAGGTCCCAATaGACAGCATGGACAGTCTTG +
Preference number: 4 (lower is better)
Translates to: PVGLGTASLGLTSVSRPAQGRSQ*TAWTVL
Trigger: CAAGACTGTCCATGCTGTGCATTGGGACCTCCCTTG...AGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS-3UTR GCA 90 bp GGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAAGCACAGAAGTGGGTaGTGGTCGAAGTGCAGGACA +
Preference number: 4 (lower is better)
Translates to: GSSPVGLGTASLGLTSVSKHRSG*WSKCRT
Trigger: TGTCCTGCACTTCGACCAGCACCCACTTCTGTGCTT...AGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS-3UTR GCA 90 bp CCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTAAGCACAGAAGTGGGTaGTGGTCGAAGTGCAGGACA +
Preference number: 4 (lower is better)
Translates to: PVGLGTASLGLTSVSRPAKHRSG*WSKCRT
Trigger: TGTCCTGCACTTCGACCAGCACCCACTTCTGTGCTT...AGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS-3UTR GCA 90 bp GTCCCTGGGAAAACCCACCTACTTGAGTCCCAGGAGCTGTGTGTACATCTCTGTTCTGGACCCAGGCTTTaGTCAGTCCATGGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: VPGKTHLLESQELCVHLCSGPRL*SVHGFW
Trigger: CCAGAAGCCATGGACTGAGCAAAGCCTGGGTCCAGA...ACAGAGATGTACACACAGCTCCTGGGACTCAAGTAGGTGGGTTTTCCCAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp TCCCCGCAGTACAAAACTGCATCAGTGGGTGAATCGAGGATGAGCCACAGGACACCTGCTGCGAGTGCATaGCATGTGAGTCAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: SPQYKTASVGESRMSHRTPAASA*HVSQEW
Trigger: CCACTCTTGACTCACATGGCATGCACTCGCAGCAGG...TGTCCTGTGGCTCATCCTCGATTCACCCACTGATGCAGTTTTGTACTGCGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR GCA 90 bp AGGCACAGCCTGAGGGCACTGGGGGCCACAGCTGCCACTGTTCAGGCAAGTCAGTACAGAAATTTCCCATaGATCTCTCCATCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: RHSLRALGATAATVQASQYRNFP*ISPSVC
Trigger: ACAGACAGATGGAGAGATGCATGGGAAATTTCTGTA...CTGACTTGCCTGAACAGTGGCAGCTGTGGCCCCCAGTGCCCTCAGGCTGTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR GCA 90 bp ACCAACAGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCACTGCCAAGCGTCACCTaGCATTCCCAGAAGAACACA +
Preference number: 4 (lower is better)
Translates to: TNRFSHTPTEIAGVCLPALPSVT*HSQKNT
Trigger: TGTGTTCTTCTGGGAATGGCAGGTGACGCTTGGCAG...TGCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCTGTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp TCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGATCTGGAGGCACTGGATaGGATCAGTCAGCACCCACG +
Preference number: 4 (lower is better)
Translates to: SSPVGLGTASLGLTSVSRSGGTG*DQSAPT
Trigger: CGTGGGTGCTGACTGATCCCATCCAGTGCCTCCAGA...TCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS-3UTR CCA 90 bp GGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGAATCTGGAGGCACTaGATGGGATCAGTCAGCACC +
Preference number: 4 (lower is better)
Translates to: GSSPVGLGTASLGLTSVSRIWRH*MGSVST
Trigger: GGTGCTGACTGATCCCATCCAGTGCCTCCAGATTCT...AGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS-3UTR CCA 90 bp TGGAGATCTGTCTCAGAGAGGAGGGTAAAGTGCCATAATGGTGGAAAGACACCATGGGGCAGCCCCCTCTaGGAGGTCATAGGTGCACTC +
Preference number: 4 (lower is better)
Translates to: WRSVSERRVKCHNGGKTPWGSPL*EVIGAL
Trigger: GAGTGCACCTATGACCTCCCAGAGGGGGCTGCCCCA...TGGTGTCTTTCCACCATTATGGCACTTTACCCTCCTCTCTGAGACAGATCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp AATGGTGGAAAGACACCATCAAGAAATAGTGGTGTAGGGGTGGCTCTGAGCTGGACCGAGGCTACCGCCTaGACGTCCTTGTTCGGGGAA +
Preference number: 4 (lower is better)
Translates to: NGGKTPSRNSGVGVALSWTEATA*TSLFGE
Trigger: TTCCCCGAACAAGGACGTCCAGGCGGTAGCCTCGGT...CCAGCTCAGAGCCACCCCTACACCACTATTTCTTGATGGTGTCTTTCCACCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp TCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGGGTTCATGGGGACTTaGTCTCCTCTTTCTGGACCC +
Preference number: 4 (lower is better)
Translates to: SPVGLGTASLGLTSVSRPGFMGT*SPLSGP
Trigger: GGGTCCAGAAAGAGGAGACCAAGTCCCCATGAACCC...TGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp TCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGTAGGAGACTCTGGCTaGGGTTCATGGGGACTTGGT +
Preference number: 4 (lower is better)
Translates to: SPVGLGTASLGLTSVSRPVGDSG*GSWGLG
Trigger: ACCAAGTCCCCATGAACCCCAGCCAGAGTCTCCTAC...TGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp AGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCAGTACAAGTAGGAGACTCTGGCTaGGGTTCATGGGGACTTGGT +
Preference number: 4 (lower is better)
Translates to: RFSHTPTEIAGVCLPAVQVGDSG*GSWGLG
Trigger: ACCAAGTCCCCATGAACCCCAGCCAGAGTCTCCTAC...TTGTACTGCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp AGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCAGTACAACGAGTACCCTCACTCTaGTTCCTCATCAGCGTCGGA +
Preference number: 4 (lower is better)
Translates to: RFSHTPTEIAGVCLPAVQRVPSL*FLISVG
Trigger: TCCGACGCTGATGAGGAACCAGAGTGAGGGTACTCG...TTGTACTGCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR CCA 90 bp GAGAGATCTGGGAAGCCTGCGGGCGCATGGAGATCTGTCTCAGAGAGGAGGGTAAGCCTAGCTGAAACATaGTATGGGCTGGTCAAATGC +
Preference number: 4 (lower is better)
Translates to: ERSGKPAGAWRSVSERRVSLAET*YGLVKC
Trigger: GCATTTGACCAGCCCATACCATGTTTCAGCTAGGCT...TACCCTCCTCTCTGAGACAGATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp CAAAGACCAGAAATTGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGAGGTGTGCTCTCCCTGTaGCTCTGGTGGTGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: QRPEIGSSPVGLGTASLGGVLSL*LWWWLS
Trigger: ACTCAGCCACCACCAGAGCCACAGGGAGAGCACACC...TCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCAATTTCTGGTCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp TTCAAATGGAACTTTGGTAGAAGGTACACTGGGACCCAGGGTAGCCCGGCAGCATCATGGTTCAGTGCCTaGAGAGTCCAGGGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: FKWNFGRRYTGTQGSPAASWFSA*RVQGCQ
Trigger: CTGACACCCCTGGACTCTCCAGGCACTGAACCATGA...TGCTGCCGGGCTACCCTGGGTCCCAGTGTACCTTCTACCAAAGTTCCATTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR CAA 72 bp GGGAGCACATCCCAGCTTTCTTACATGAGCCTTGCTTaGTTGTCTCGTCTGCCAAGCGTCACCTGCCATTCC +
Preference number: 4 (lower is better)
Translates to: GSTSQLSYMSLA*LSRLPSVTCHS
Trigger: GGAATGGCAGGTGACGCTTGGCAGACGAGACAACAAAGCAAGGCTCATGTAAGAAAGCTGGGATGTGCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp TGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCATGATGGTTAAGGACTaGTTCACAGGAGGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: WLFSCGPWYSFSWTDLCVMMVKD*FTGGEL
Trigger: CAGCTCCCCTCCTGTGAATCAGTCCTTAACCATCAT...GACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS-3UTR TCA 90 bp GGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTATGATGGTTAAGGACTaGTTCACAGGAGGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GSSPVGLGTASLGLTSVSMMVKD*FTGGEL
Trigger: CAGCTCCCCTCCTGTGAATCAGTCCTTAACCATCAT...AGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS-3UTR TCA 90 bp GGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTGCAGAAGAACTCATCTaGGCTGCTGGACTCAGTATC +
Preference number: 4 (lower is better)
Translates to: GSSPVGLGTASLGLTSVSAEELI*AAGLSI
Trigger: GATACTGAGTCCAGCAGCTCAGATGAGTTCTTCTGC...AGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp TCCCCGCAGTACAAAACTGCATCAGTGGGTGAATCGAGGATGAGCCACAGGACACTCAGGGTCAGTGTCTaGTGTGCCACTGTCACTAGA +
Preference number: 4 (lower is better)
Translates to: SPQYKTASVGESRMSHRTLRVSV*CATVTR
Trigger: TCTAGTGACAGTGGCACATCAGACACTGACCCTGAG...TGTCCTGTGGCTCATCCTCGATTCACCCACTGATGCAGTTTTGTACTGCGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp GTCCCTGGGAAAACCCACCTACTTGAGTCCCAGGAGCTGTGTGTACATCTCTGTCACAGTGAGCCTAGCTaGAACATGGTATGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: VPGKTHLLESQELCVHLCHSEPS*NMVWAG
Trigger: ACCAGCCCATACCATGTTTCAGCTAGGCTCACTGTG...ACAGAGATGTACACACAGCTCCTGGGACTCAAGTAGGTGGGTTTTCCCAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp TCCCCGCAGTACAAAACTGCATCAGTGGGTGAATCGAGGATGAGCCACAGGACAAACTGCATCAGTGGGTaGATCGAGGATGAGCCACAG +
Preference number: 4 (lower is better)
Translates to: SPQYKTASVGESRMSHRTNCISG*IEDEPQ
Trigger: CTGTGGCTCATCCTCGATTCACCCACTGATGCAGTT...TGTCCTGTGGCTCATCCTCGATTCACCCACTGATGCAGTTTTGTACTGCGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp TCCCTGGGAAAACCCACCTACTTGAGTCCCAGGAGCTGTGTGTACATCTCTGTCGAAAACCCACCTACTTaGGTCCCAGGAGCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: SLGKPTYLSPRSCVYISVENPPT*VPGAVC
Trigger: ACACACAGCTCCTGGGACTCAAGTAGGTGGGTTTTC...GACAGAGATGTACACACAGCTCCTGGGACTCAAGTAGGTGGGTTTTCCCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp TCCCCGCAGTACAAAACTGCATCAGTGGGTGAATCGAGGATGAGCCACAGGACATCCCAGAAGAACACATaGAGCCATGTGTCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: SPQYKTASVGESRMSHRTSQKNT*SHVSLG
Trigger: TCCCAGGGACACATGGCTTCATGTGTTCTTCTGGGA...TGTCCTGTGGCTCATCCTCGATTCACCCACTGATGCAGTTTTGTACTGCGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp TGGAGATCTGTCTCAGAGAGGAGGGTAAAGTGCCATAATGGTGGAAAGACACCATGGAGGCCCGTTTCCTaGGGTGAGGACCCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: WRSVSERRVKCHNGGKTPWRPVS*GEDPGL
Trigger: TAGACCTGGGTCCTCACCTCAGGAAACGGGCCTCCA...TGGTGTCTTTCCACCATTATGGCACTTTACCCTCCTCTCTGAGACAGATCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp CTCCAGGGTTTCCTATGTCCATTGAGGGAGTGTTTCTGGGATAAGAGGCTTCTTGGCTCTGGTGGTGGCTaGGTTCCTCGCACTCATCCT +
Preference number: 4 (lower is better)
Translates to: LQGFLCPLRECFWDKRLLGSGGG*VPRTHP
Trigger: AGGATGAGTGCGAGGAACTCAGCCACCACCAGAGCC...AAGAAGCCTCTTATCCCAGAAACACTCCCTCAATGGACATAGGAAACCCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR TCA 90 bp GAGAGATCTGGGAAGCCTGCGGGCGCATGGAGATCTGTCTCAGAGAGGAGGGTAGTTTCCTATGTCCATTaGGGGAGTGTTTCTGGGATA +
Preference number: 4 (lower is better)
Translates to: ERSGKPAGAWRSVSERRVVSYVH*GSVSGI
Trigger: TATCCCAGAAACACTCCCTCAATGGACATAGGAAAC...TACCCTCCTCTCTGAGACAGATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR GCA 90 bp GAGAGATCTGGGAAGCCTGCGGGCGCATGGAGATCTGTCTCAGAGAGGAGGGTATCAAATGCCTTCCATTaGTTCAGCTGGGGAATGAAG +
Preference number: 4 (lower is better)
Translates to: ERSGKPAGAWRSVSERRVSNAFH*FSWGMK
Trigger: CTTCATTCCCCAGCTGAAGCAATGGAAGGCATTTGA...TACCCTCCTCTCTGAGACAGATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR GCA 90 bp GGTACATCCGATCCCAGGGGAGAGATCTGGGAAGCCTGCGGGCGCATGGAGATCTTGTTTACTTGTTCCTaGAGGCTTTCAATCACAGCA +
Preference number: 4 (lower is better)
Translates to: GTSDPRGEIWEACGRMEILFTCS*RLSITA
Trigger: TGCTGTGATTGAAAGCCTGCAGGAACAAGTAAACAA...GATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTCCCCTGGGATCGGATGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp TCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACTGGGAGGTCATAGGTaGACTCAGCTGACATCAGCC +
Preference number: 4 (lower is better)
Translates to: SSPVGLGTASLGLTSVSRLGGHR*TQLTSA
Trigger: GGCTGATGTCAGCTGAGTGCACCTATGACCTCCCAG...TCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp TCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGATCTGGACCCAGGCTTTaGTCAGTCCATGGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SSPVGLGTASLGLTSVSRSGPRL*SVHGFW
Trigger: CCAGAAGCCATGGACTGAGCAAAGCCTGGGTCCAGA...TCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp TGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTCTGAGTTCTCCAGATaGCTCTGTCTCTGGGGATCT +
Preference number: 4 (lower is better)
Translates to: WLFSCGPWYSFSWTDLCVSEFSR*LCLWGS
Trigger: AGATCCCCAGAGACAGAGGCATCTGGAGAACTCAGA...GACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp TCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGATCTGCACATGTAGCCTaGTGTGTGCCCCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: SSPVGLGTASLGLTSVSRSAHVA*CVPQEQ
Trigger: CTGTTCCTGGGGCACACAGCAGGCTACATGTGCAGA...TCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp AATGGTGGAAAGACACCATCAAGAAATAGTGGTGTAGGGGTGGCTCTGAGCTGGACTGGGGGCCACAGCTaGCACTGTTCAGGCAAGTCA +
Preference number: 4 (lower is better)
Translates to: NGGKTPSRNSGVGVALSWTGGHS*HCSGKS
Trigger: TGACTTGCCTGAACAGTGGCAGCTGTGGCCCCCAGT...CCAGCTCAGAGCCACCCCTACACCACTATTTCTTGATGGTGTCTTTCCACCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp GGTACATCCGATCCCAGGGGAGAGATCTGGGAAGCCTGCGGGCGCATGGAGATCAGAACTCATCTGAGCTaGTGGACTCAGTATCAAAAT +
Preference number: 4 (lower is better)
Translates to: GTSDPRGEIWEACGRMEIRTHLS*WTQYQN
Trigger: ATTTTGATACTGAGTCCAGCAGCTCAGATGAGTTCT...GATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTCCCCTGGGATCGGATGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp TCCCCGCAGTACAAAACTGCATCAGTGGGTGAATCGAGGATGAGCCACAGGACACTAGACCAGCTCTGTTaGTTTTCACACCAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: SPQYKTASVGESRMSHRTLDQLC*FSHQRG
Trigger: CCCACGCTGGTGTGAAAAGCAACAGAGCTGGTCTAG...TGTCCTGTGGCTCATCCTCGATTCACCCACTGATGCAGTTTTGTACTGCGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp ACATGGTATGGGCTGGTCAAATGCAGGGCACTAATCTGTTCCCCAAAGACCAGACAACTGGTCCCCTGCTaGGAGTGCATGCCATGTGAG +
Preference number: 4 (lower is better)
Translates to: TWYGLVKCRALICSPKTRQLVPC*ECMPCE
Trigger: CTCACATGGCATGCACTCGCAGCAGGGGACCAGTTG...TCTGGTCTTTGGGGAACAGATTAGTGCCCTGCATTTGACCAGCCCATACCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR GCA 90 bp GTCCCTGGGAAAACCCACCTACTTGAGTCCCAGGAGCTGTGTGTACATCTCTGTCTCCATGTCACCACATaGCCCTGTTGGTGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: VPGKTHLLESQELCVHLCLHVTT*PCWCVL
Trigger: AAGCACACACCAACAGGGGCATGTGGTGACATGGAG...ACAGAGATGTACACACAGCTCCTGGGACTCAAGTAGGTGGGTTTTCCCAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR GCA 90 bp GAGAGATCTGGGAAGCCTGCGGGCGCATGGAGATCTGTCTCAGAGAGGAGGGTAGAGAGGAGGGTAAAGTaGCATAATGGTGGAAAGACA +
Preference number: 4 (lower is better)
Translates to: ERSGKPAGAWRSVSERRVERRVK*HNGGKT
Trigger: TGTCTTTCCACCATTATGGCACTTTACCCTCCTCTC...TACCCTCCTCTCTGAGACAGATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp ACCAACAGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCACTTTGTTGTCTCGTCTaGCAAGCGTCACCTGCCATT +
Preference number: 4 (lower is better)
Translates to: TNRFSHTPTEIAGVCLPALCCLV*QASPAI
Trigger: AATGGCAGGTGACGCTTGGCAGACGAGACAACAAAG...TGCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCTGTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp GGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTCTTTGTTGTCTCGTCTaGCAAGCGTCACCTGCCATT +
Preference number: 4 (lower is better)
Translates to: GSSPVGLGTASLGLTSVSLCCLV*QASPAI
Trigger: AATGGCAGGTGACGCTTGGCAGACGAGACAACAAAG...AGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp TCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGAACAGACGTGAGCCACTaGTTCCAGCCCATCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SSPVGLGTASLGLTSVSRTDVSH*FQPILP
Trigger: AGGAAGGATGGGCTGGAAGCAGTGGCTCACGTCTGT...TCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR CCA 90 bp TCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACTCCGATCCAGCTCCTaGCCAGGAAAACTGTCACAC +
Preference number: 4 (lower is better)
Translates to: SSPVGLGTASLGLTSVSRLRSSS*PGKLSH
Trigger: GTGTGACAGTTTTCCTGGCCAGGAGCTGGATCGGAG...TCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp TCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAAGAATCTGGAGGCACTaGATGGGATCAGTCAGCACC +
Preference number: 4 (lower is better)
Translates to: SPVGLGTASLGLTSVSRPRIWRH*MGSVST
Trigger: GGTGCTGACTGATCCCATCCAGTGCCTCCAGATTCT...TGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS-3UTR CCA 90 bp ACAGTCAGGACCTCAGGTACATCCGATCCCAGGGGAGAGATCTGGGAAGCCTGCTTCCATTGCTTCAGCTaGGGAATGAAGATGAAGCAG +
Preference number: 4 (lower is better)
Translates to: TVRTSGTSDPRGEIWEACFHCFS*GMKMKQ
Trigger: CTGCTTCATCTTCATTCCCCAGCTGAAGCAATGGAA...GCAGGCTTCCCAGATCTCTCCCCTGGGATCGGATGTACCTGAGGTCCTGACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR CCA 90 bp AGAGTCCAGGGGTGTCAGCAGCCCCCAAGATTCCATGATAAATTGATGATACATTCCCTGGGGAGAAGCTaGAGTCCTTCCCAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: RVQGCQQPPRFHDKLMIHSLGRS*SPSQAP
Trigger: AGGGGCCTGGGAAGGACTCCAGCTTCTCCCCAGGGA...ATGTATCATCAATTTATCATGGAATCTTGGGGGCTGCTGACACCCCTGGACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR CCA 90 bp GTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTCTGTTGGTCTCCTCTTTCTaGACCCAGGCTTTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: VGLGTASLGLTSVSRPALLVSSF*TQALLS
Trigger: ACTGAGCAAAGCCTGGGTCCAGAAAGAGGAGACCAA...CAGAGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp AAATTGCTGGTGTGTGCCTCCCCGCAGTACAAAACTGCATCAGTGGGTGAATCGTCTGGTAGGAGACTCTaGCTGGGGTTCATGGGGACT +
Preference number: 4 (lower is better)
Translates to: KLLVCASPQYKTASVGESSGRRL*LGFMGT
Trigger: AGTCCCCATGAACCCCAGCCAGAGTCTCCTACCAGA...CGATTCACCCACTGATGCAGTTTTGTACTGCGGGGAGGCACACACCAGCAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp TCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCACCAGAACCAGAAGGCTaGCGAAGAAAGGCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: SPVGLGTASLGLTSVSRPPEPEG*RRKAAL
Trigger: CAAAGCAGCCTTTCTTCGCCAGCCTTCTGGTTCTGG...TGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp CCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTTTCTCCTGTGGGCCTTaGTACAGCTTCTCTTGGACT +
Preference number: 4 (lower is better)
Translates to: PVGLGTASLGLTSVSRPAFSCGP*YSFSWT
Trigger: AGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAA...AGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp GTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTCTGTTCTCCTGTGGGCCTTaGTACAGCTTCTCTTGGACT +
Preference number: 4 (lower is better)
Translates to: VGLGTASLGLTSVSRPALFSCGP*YSFSWT
Trigger: AGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAA...CAGAGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp CCAAAAGGCCAGTTTGATGGGTCACAGTCCACACCTCAAGTTCTACAGAAATTTCCCAGGGGAGAGATCTaGGAAGCCTGCGGGCGCATG +
Preference number: 4 (lower is better)
Translates to: PKGQFDGSQSTPQVLQKFPRGEI*EACGRM
Trigger: CATGCGCCCGCAGGCTTCCCAGATCTCTCCCCTGGG...AAATTTCTGTAGAACTTGAGGTGTGGACTGTGACCCATCAAACTGGCCTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp GTAAGGCTGCGAGGTAGTAACAGGACAGGCAATGCCTCTCTTTTTATAGATCAAGCTCCCCAGCTCCCTTaGGAGGTGCCAGTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: VRLRGSNRTGNASLFIDQAPQLP*EVPVWP
Trigger: AGGCCACACTGGCACCTCCCAAGGGAGCTGGGGAGC...TTGATCTATAAAAAGAGAGGCATTGCCTGTCCTGTTACTACCTCGCAGCCTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp TGTCTAGACCAGCTCTGTTGCTTTTCACACCAGCGTGGGTTTCAAGTCATCTTTTCTCCGGGCCCCTCCTaGCCAGCCCCAGATTACAGT +
Preference number: 4 (lower is better)
Translates to: CLDQLCCFSHQRGFQVIFSPGPS*PAPDYS
Trigger: ACTGTAATCTGGGGCTGGCCAGGAGGGGCCCGGAGA...AAAGATGACTTGAAACCCACGCTGGTGTGAAAAGCAACAGAGCTGGTCTAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR CAA 72 bp GTGGGTTTCAAGTCATCTTTGAAGTTCACAATAGGCTaGGAGCGGGCCCACAGCTTTTCCCAGGAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: VGFKSSLKFTIG*ERAHSFSQEAS
Trigger: GCTGGCTTCCTGGGAAAAGCTGTGGGCCCGCTCCAAGCCTATTGTGAACTTCAAAGATGACTTGAAACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR TCA 90 bp ACAGTCAGGACCTCAGGTACATCCGATCCCAGGGGAGAGATCTGGGAAGCCTGCCTGTTCTTCCTGCAGTaGATTGTAAAGGCAAGAAAG +
Preference number: 4 (lower is better)
Translates to: TVRTSGTSDPRGEIWEACLFFLQ*IVKARK
Trigger: CTTTCTTGCCTTTACAATTCACTGCAGGAAGAACAG...GCAGGCTTCCCAGATCTCTCCCCTGGGATCGGATGTACCTGAGGTCCTGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp TCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCACCTTGCATCCCCAAATaGGAGCAATCCAAACATCGG +
Preference number: 4 (lower is better)
Translates to: SPVGLGTASLGLTSVSRPPCIPK*EQSKHR
Trigger: CCGATGTTTGGATTGCTCTCATTTGGGGATGCAAGG...TGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS-3UTR TCA 90 bp CTTGGGGCCCGGCCAGAACCAGAAGGCTGGCGAAGAAAGGCTGCTTTGCTCCCTATCAGAAAAGTCTTTTaGGTCAGATATCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LGARPEPEGWRRKAALLPIRKVF*VRYLLL
Trigger: GAGGAGAAGATATCTGACTCAAAAGACTTTTCTGAT...AGGGAGCAAAGCAGCCTTTCTTCGCCAGCCTTCTGGTTCTGGCCGGGCCCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR TCA 90 bp CACCAAAAGGCCAGTTTGATGGGTCACAGTCCACACCTCAAGTTCTACAGAAATCTCTGGGGGCTCCTCTaGGTTCTCCAGATGCCTCTG +
Preference number: 4 (lower is better)
Translates to: HQKASLMGHSPHLKFYRNLWGLL*VLQMPL
Trigger: CAGAGGCATCTGGAGAACTCAGAGGAGCCCCCAGAG...ATTTCTGTAGAACTTGAGGTGTGGACTGTGACCCATCAAACTGGCCTTTTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp CCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTGTACCTGGTCTGTCTTaGGGATCTGAAGGTAGTGAA +
Preference number: 4 (lower is better)
Translates to: PVGLGTASLGLTSVSRPAVPGLS*GSEGSE
Trigger: TTCACTACCTTCAGATCCTCAAGACAGACCAGGTAC...AGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp ACCAACAGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCAGTACCTGGTCTGTCTTaGGGATCTGAAGGTAGTGAA +
Preference number: 4 (lower is better)
Translates to: TNRFSHTPTEIAGVCLPAVPGLS*GSEGSE
Trigger: TTCACTACCTTCAGATCCTCAAGACAGACCAGGTAC...TGCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCTGTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp TCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACTCAGGGTCAGTGTCTaGTGTGCCACTGTCACTAGA +
Preference number: 4 (lower is better)
Translates to: SSPVGLGTASLGLTSVSRLRVSV*CATVTR
Trigger: TCTAGTGACAGTGGCACATCAGACACTGACCCTGAG...TCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp TCCCCGCAGTACAAAACTGCATCAGTGGGTGAATCGAGGATGAGCCACAGGACACGAGTGCATGCCATGTaGGTCAAGAGTGGACATCTT +
Preference number: 4 (lower is better)
Translates to: SPQYKTASVGESRMSHRTRVHAM*VKSGHL
Trigger: AAGATGTCCACTCTTGACTCACATGGCATGCACTCG...TGTCCTGTGGCTCATCCTCGATTCACCCACTGATGCAGTTTTGTACTGCGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR TCA 90 bp GGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTACATCCTTCAACTGGTaGCCCTCCAAAGTCAGACAT +
Preference number: 4 (lower is better)
Translates to: GSSPVGLGTASLGLTSVSTSFNW*PSKVRH
Trigger: ATGTCTGACTTTGGAGGGTCACCAGTTGAAGGATGT...AGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR TCA 90 bp ACCAACAGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCACCCAGCTTTCTTACATaGGCCTTGCTTTGTTGTCTC +
Preference number: 4 (lower is better)
Translates to: TNRFSHTPTEIAGVCLPAPSFLT*ALLCCL
Trigger: GAGACAACAAAGCAAGGCTCATGTAAGAAAGCTGGG...TGCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCTGTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp GACCAACAGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCCTGAGCCTTGAAGGATaGATAATTCACAAGGGCACA +
Preference number: 4 (lower is better)
Translates to: DQQVLPYPNRNCWCVPPRLSLEG*IIHKGT
Trigger: TGTGCCCTTGTGAATTATTCATCCTTCAAGGCTCAG...GCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCTGTTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR TCA 90 bp GACCAACAGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCATGGCTGGGAAAGGTTaGAGAAAGAATGTATGCTCC +
Preference number: 4 (lower is better)
Translates to: DQQVLPYPNRNCWCVPPRMAGKG*RKNVCS
Trigger: GGAGCATACATTCTTTCTTCAACCTTTCCCAGCCAT...GCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCTGTTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR GCA 90 bp AATGGTGGAAAGACACCATCAAGAAATAGTGGTGTAGGGGTGGCTCTGAGCTGGCTGGGAGGTCATAGGTaGACTCAGCTGACATCAGCC +
Preference number: 4 (lower is better)
Translates to: NGGKTPSRNSGVGVALSWLGGHR*TQLTSA
Trigger: GGCTGATGTCAGCTGAGTGCACCTATGACCTCCCAG...CCAGCTCAGAGCCACCCCTACACCACTATTTCTTGATGGTGTCTTTCCACCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp TCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAAATCCCGGGCAGCCATaGCAGGATCATTCTGAAAGT +
Preference number: 4 (lower is better)
Translates to: SPVGLGTASLGLTSVSRPNPGQP*QDHSES
Trigger: ACTTTCAGAATGATCCTGGCATGGCTGCCCGGGATT...TGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp TCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACTAGACCAGCTCTGTTaGTTTTCACACCAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: SSPVGLGTASLGLTSVSRLDQLC*FSHQRG
Trigger: CCCACGCTGGTGTGAAAAGCAACAGAGCTGGTCTAG...TCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp AGTTCTCCAGATGCCTCTGTCTCTGGGGATCTGAGCCGCCTCTTTCTGGTAGGATATGGGCTGGTCAAATaGAGGGCACTAATCTGTTCC +
Preference number: 4 (lower is better)
Translates to: SSPDASVSGDLSRLFLVGYGLVK*RALICS
Trigger: GGAACAGATTAGTGCCCTGCATTTGACCAGCCCATA...TCCTACCAGAAAGAGGCGGCTCAGATCCCCAGAGACAGAGGCATCTGGAGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR GCA 90 bp GTCCCTGGGAAAACCCACCTACTTGAGTCCCAGGAGCTGTGTGTACATCTCTGTGAAATTGCTGGTGTGTaGCTCCCCGCAGTACAAAAC +
Preference number: 4 (lower is better)
Translates to: VPGKTHLLESQELCVHLCEIAGV*LPAVQN
Trigger: GTTTTGTACTGCGGGGAGGCACACACCAGCAATTTC...ACAGAGATGTACACACAGCTCCTGGGACTCAAGTAGGTGGGTTTTCCCAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp TGTCCACCAAAAGGCCAGTTTGATGGGTCACAGTCCACACCTCAAGTTCTACAGCACAGAAGTGGGTGCTaGTCGAAGTGCAGGACACGT +
Preference number: 4 (lower is better)
Translates to: CPPKGQFDGSQSTPQVLQHRSGC*SKCRTR
Trigger: ACGTGTCCTGCACTTCGACCAGCACCCACTTCTGTG...CTGTAGAACTTGAGGTGTGGACTGTGACCCATCAAACTGGCCTTTTGGTGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR CCA 90 bp TCAGTGTCTTTCATAGTCACTCAACTGGAGTCTTTTATAGTAAGGCTGCGAGGTGACAAGAGGGGGCGGTaGAGAGGGAAGCCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: SVSFIVTQLESFIVRLRGDKRGR*RGKPQG
Trigger: GCCCTGAGGCTTCCCTCTCCACCGCCCCCTCTTGTC...ACCTCGCAGCCTTACTATAAAAGACTCCAGTTGAGTGACTATGAAAGACACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp TCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGAACCAGAAGGCTaGCGAAGAAAGGCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: SSPVGLGTASLGLTSVSRPEPEG*RRKAAL
Trigger: CAAAGCAGCCTTTCTTCGCCAGCCTTCTGGTTCTGG...TCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp AATGGTGGAAAGACACCATCAAGAAATAGTGGTGTAGGGGTGGCTCTGAGCTGGCAGACATCCTTCAACTaGTCCCCTGCTGCGAGTGCA +
Preference number: 4 (lower is better)
Translates to: NGGKTPSRNSGVGVALSWQTSFN*SPAASA
Trigger: TGCACTCGCAGCAGGGGACCAGTTGAAGGATGTCTG...CCAGCTCAGAGCCACCCCTACACCACTATTTCTTGATGGTGTCTTTCCACCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR CCA 90 bp GGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTACCACATGCCCCTGTTaGTGTGTGCTTATTCACAGT +
Preference number: 4 (lower is better)
Translates to: GSSPVGLGTASLGLTSVSTTCPC*CVLIHS
Trigger: ACTGTGAATAAGCACACACCAACAGGGGCATGTGGT...AGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR CCA 90 bp AAATTGCTGGTGTGTGCCTCCCCGCAGTACAAAACTGCATCAGTGGGTGAATCGTTGGCTCTTCTCCTGTaGGCCTTGGTACAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: KLLVCASPQYKTASVGESLALLL*ALVQLL
Trigger: GAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCAA...CGATTCACCCACTGATGCAGTTTTGTACTGCGGGGAGGCACACACCAGCAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp GTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTCTGAGCCTAGCTGAAACATaGTATGGGCTGGTCAAATGC +
Preference number: 4 (lower is better)
Translates to: VGLGTASLGLTSVSRPALSLAET*YGLVKC
Trigger: GCATTTGACCAGCCCATACCATGTTTCAGCTAGGCT...CAGAGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp ACAGTCAGGACCTCAGGTACATCCGATCCCAGGGGAGAGATCTGGGAAGCCTGCGAATGTAGGCTGACCTaGACAGAAAATCCTATGTGT +
Preference number: 4 (lower is better)
Translates to: TVRTSGTSDPRGEIWEACECRLT*TENPMC
Trigger: ACACATAGGATTTTCTGTCCAGGTCAGCCTACATTC...GCAGGCTTCCCAGATCTCTCCCCTGGGATCGGATGTACCTGAGGTCCTGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp GTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTCTGGCAGAAGTCCACAGCTaGGAAAAGTCCAAACAATAC +
Preference number: 4 (lower is better)
Translates to: VGLGTASLGLTSVSRPALAEVHS*EKSKQY
Trigger: GTATTGTTTGGACTTTTCTCAGCTGTGGACTTCTGC...CAGAGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp GGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTGCAGAAGTCCACAGCTaGGAAAAGTCCAAACAATAC +
Preference number: 4 (lower is better)
Translates to: GSSPVGLGTASLGLTSVSAEVHS*EKSKQY
Trigger: GTATTGTTTGGACTTTTCTCAGCTGTGGACTTCTGC...AGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp TCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGAAAGCGCTACTGTAAGTaGGACAACTGCCCAGTAAGG +
Preference number: 4 (lower is better)
Translates to: SSPVGLGTASLGLTSVSRKRYCK*DNCPVR
Trigger: CCTTACTGGGCAGTTGTCTCACTTACAGTAGCGCTT...TCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS-3UTR TCA 90 bp CAAAGACCAGAAATTGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGAAGATCCCTCCAGATGTaGGTCCAAAGACCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: QRPEIGSSPVGLGTASLGRSLQM*VQRPGW
Trigger: CCAACCTGGTCTTTGGACTCACATCTGGAGGGATCT...TCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCAATTTCTGGTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR TCA 90 bp CCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTTTTTGTTGGGAGTGCTaGAATATTTGGCCATGCGTC +
Preference number: 4 (lower is better)
Translates to: PVGLGTASLGLTSVSRPAFCWEC*NIWPCV
Trigger: GACGCATGGCCAAATATTTCAGCACTCCCAACAAAA...AGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp GACCAACAGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCTTACAGAATGTAGGCTaGCCTGGACAGAAAATCCTA +
Preference number: 4 (lower is better)
Translates to: DQQVLPYPNRNCWCVPPRLQNVG*PGQKIL
Trigger: TAGGATTTTCTGTCCAGGTCAGCCTACATTCTGTAA...GCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCTGTTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp AGAGTCCAGGGGTGTCAGCAGCCCCCAAGATTCCATGATAAATTGATGATACATTGGGTGAATCGAGGATaGGCCACAGGACAAGGGGAC +
Preference number: 4 (lower is better)
Translates to: RVQGCQQPPRFHDKLMIHWVNRG*ATGQGD
Trigger: GTCCCCTTGTCCTGTGGCTCATCCTCGATTCACCCA...ATGTATCATCAATTTATCATGGAATCTTGGGGGCTGCTGACACCCCTGGACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR TCA 90 bp CCTCTTTCTGGTAGGAGACTCTGGCTGGGGTTCATGGGGACTTGGTCTCCTCTTAACCAAAAGCACTCTTaGCCAACAGGTTCTCCCATA +
Preference number: 4 (lower is better)
Translates to: PLSGRRLWLGFMGTWSPLNQKHS*PTGSPI
Trigger: TATGGGAGAACCTGTTGGTCAAGAGTGCTTTTGGTT...AAGAGGAGACCAAGTCCCCATGAACCCCAGCCAGAGTCTCCTACCAGAAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR TCA 90 bp AATGGTGGAAAGACACCATCAAGAAATAGTGGTGTAGGGGTGGCTCTGAGCTGGCTCTGTCCAGCAGTGTaGTGTTGCGGGAAACTACCT +
Preference number: 4 (lower is better)
Translates to: NGGKTPSRNSGVGVALSWLCPAV*CCGKLP
Trigger: AGGTAGTTTCCCGCAACATCACACTGCTGGACAGAG...CCAGCTCAGAGCCACCCCTACACCACTATTTCTTGATGGTGTCTTTCCACCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp CAAAGACCAGAAATTGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGAGCCCGTTTCCTGAGGTaGGGACCCAGGTCTATTATT +
Preference number: 4 (lower is better)
Translates to: QRPEIGSSPVGLGTASLGARFLR*GPRSII
Trigger: AATAATAGACCTGGGTCCTCACCTCAGGAAACGGGC...TCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCAATTTCTGGTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp GGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTGATTTAGAGTCCACATaGATGAATGGTGGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: GSSPVGLGTASLGLTSVSDLEST*MNGGLL
Trigger: TAGCAGCCCACCATTCATTCATGTGGACTCTAAATC...AGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR GCA 90 bp TCTGTGTCTAGACCAGCTCTGTTGCTTTTCACACCAGCGTGGGTTTCAAGTCATGGGCTGTCCCCATTCTaGACATGTAGCCTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SVSRPALLLFTPAWVSSHGLSPF*TCSLLC
Trigger: ACACAGCAGGCTACATGTGCAGAATGGGGACAGCCC...ATGACTTGAAACCCACGCTGGTGTGAAAAGCAACAGAGCTGGTCTAGACACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR GCA 90 bp CACCAAAAGGCCAGTTTGATGGGTCACAGTCCACACCTCAAGTTCTACAGAAATCTGGCGAAGAAAGGCTaGTTTGCTCCCTCTAGCCCC +
Preference number: 4 (lower is better)
Translates to: HQKASLMGHSPHLKFYRNLAKKG*FAPSSP
Trigger: GGGGCTAGAGGGAGCAAAGCAGCCTTTCTTCGCCAG...ATTTCTGTAGAACTTGAGGTGTGGACTGTGACCCATCAAACTGGCCTTTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp TGGAGATCTGTCTCAGAGAGGAGGGTAAAGTGCCATAATGGTGGAAAGACACCAGTCCCCTGCTGCGAGTaGATGCCATGTGAGTCAAGA +
Preference number: 4 (lower is better)
Translates to: WRSVSERRVKCHNGGKTPVPCCE*MPCESR
Trigger: TCTTGACTCACATGGCATGCACTCGCAGCAGGGGAC...TGGTGTCTTTCCACCATTATGGCACTTTACCCTCCTCTCTGAGACAGATCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR GCA 90 bp TCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCCCCTGTTGGTGTGTaGTTATTCACAGTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: SPVGLGTASLGLTSVSRPAPVGV*LFTVLV
Trigger: AACCAAGACTGTGAATAAGCACACACCAACAGGGGC...TGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR GCA 90 bp GTAAGGCTGCGAGGTAGTAACAGGACAGGCAATGCCTCTCTTTTTATAGATCAACAGTGGACCCAGGTGTaGTCTCCCTGTGGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: VRLRGSNRTGNASLFIDQQWTQV*SPCGSG
Trigger: ACCAGAGCCACAGGGAGAGCACACCTGGGTCCACTG...TTGATCTATAAAAAGAGAGGCATTGCCTGTCCTGTTACTACCTCGCAGCCTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp CCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTTTCCATTGCTTCAGCTaGGGAATGAAGATGAAGCAG +
Preference number: 4 (lower is better)
Translates to: PVGLGTASLGLTSVSRPAFHCFS*GMKMKQ
Trigger: CTGCTTCATCTTCATTCCCCAGCTGAAGCAATGGAA...AGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS-3UTR CCA 90 bp CCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTTCACCATACTGGGTATaGAAGCTTTTGTTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: PVGLGTASLGLTSVSRPASPYWV*KLLLGV
Trigger: CACTCCCAACAAAAGCTTCCATACCCAGTATGGTGA...AGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp TGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTCCTCCTCACCATACTaGGTATGGAAGCTTTTGTTG +
Preference number: 4 (lower is better)
Translates to: WLFSCGPWYSFSWTDLCVSSSPY*VWKLLL
Trigger: CAACAAAAGCTTCCATACCCAGTATGGTGAGGAGGA...GACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp TGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTCAGTCCATGGCTTCTaGCTACAACCTGAGTCTAAA +
Preference number: 4 (lower is better)
Translates to: WLFSCGPWYSFSWTDLCVSVHGF*LQPESK
Trigger: TTTAGACTCAGGTTGTAGCCAGAAGCCATGGACTGA...GACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp CCTCTTTCTGGTAGGAGACTCTGGCTGGGGTTCATGGGGACTTGGTCTCCTCTTTCAGTCCATGGCTTCTaGCTACAACCTGAGTCTAAA +
Preference number: 4 (lower is better)
Translates to: PLSGRRLWLGFMGTWSPLSVHGF*LQPESK
Trigger: TTTAGACTCAGGTTGTAGCCAGAAGCCATGGACTGA...AAGAGGAGACCAAGTCCCCATGAACCCCAGCCAGAGTCTCCTACCAGAAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR CCA 90 bp CAAAGACCAGAAATTGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACCAGAACCAGAAGGCTaGCGAAGAAAGGCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: QRPEIGSSPVGLGTASLGPEPEG*RRKAAL
Trigger: CAAAGCAGCCTTTCTTCGCCAGCCTTCTGGTTCTGG...TCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCAATTTCTGGTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp CACCAAAAGGCCAGTTTGATGGGTCACAGTCCACACCTCAAGTTCTACAGAAATTCAGAGGCCCCATTTTaGAGCTGGCTGCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: HQKASLMGHSPHLKFYRNSEAPF*SWLQAQ
Trigger: CTGAGCCTGCAGCCAGCTCCAAAATGGGGCCTCTGA...ATTTCTGTAGAACTTGAGGTGTGGACTGTGACCCATCAAACTGGCCTTTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR CCA 90 bp CAAAGACCAGAAATTGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGATTGGCTCTTCTCCTGTaGGCCTTGGTACAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: QRPEIGSSPVGLGTASLGLALLL*ALVQLL
Trigger: GAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCAA...TCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCAATTTCTGGTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp AGAGTCCAGGGGTGTCAGCAGCCCCCAAGATTCCATGATAAATTGATGATACATAGGACAAGGGGACAGTaGGGACAGTCAGGACCTCAG +
Preference number: 4 (lower is better)
Translates to: RVQGCQQPPRFHDKLMIHRTRGQ*GQSGPQ
Trigger: CTGAGGTCCTGACTGTCCCCACTGTCCCCTTGTCCT...ATGTATCATCAATTTATCATGGAATCTTGGGGGCTGCTGACACCCCTGGACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR CAA 72 bp ATGCAGGGCACTAATCTGTTCCCCAAAGACCAGAAATaGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: MQGTNLFPKDQK*ALLLWALVQLL
Trigger: GAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCAATTTCTGGTCTTTGGGGAACAGATTAGTGCCCTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
3UTR CAA 72 bp GTTGCTTTTCACACCAGCGTGGGTTTCAAGTCATCTTaGAAGTTCACAATAGGCTTGGAGCGGGCCCACAGC +
Preference number: 4 (lower is better)
Translates to: VAFHTSVGFKSS*KFTIGLERAHS
Trigger: GCTGTGGGCCCGCTCCAAGCCTATTGTGAACTTCAAAGATGACTTGAAACCCACGCTGGTGTGAAAAGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR TCA 90 bp TGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCCTGTTCTTCCTGCAGTaGATTGTAAAGGCAAGAAAG +
Preference number: 4 (lower is better)
Translates to: WLFSCGPWYSFSWTDLCVLFFLQ*IVKARK
Trigger: CTTTCTTGCCTTTACAATTCACTGCAGGAAGAACAG...GACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp GTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTCTGATTTGGCCATGCGTCTaGTTGTTTGGTTTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: VGLGTASLGLTSVSRPALIWPCV*LFGFPL
Trigger: AAGAGGAAAACCAAACAATCAGACGCATGGCCAAAT...CAGAGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp TCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCATTTTGTTGGGAGTGCTaGAATATTTGGCCATGCGTC +
Preference number: 4 (lower is better)
Translates to: SPVGLGTASLGLTSVSRPFCWEC*NIWPCV
Trigger: GACGCATGGCCAAATATTTCAGCACTCCCAACAAAA...TGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp TCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGAATAGGTGCACTCAGCTaGCATCAGCCTCACAATCTT +
Preference number: 4 (lower is better)
Translates to: SSPVGLGTASLGLTSVSRIGALS*HQPHNL
Trigger: AAGATTGTGAGGCTGATGTCAGCTGAGTGCACCTAT...TCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp CCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTTCTTGTAAGACCTCCTaGAGTTTCTCCCTGATTACT +
Preference number: 4 (lower is better)
Translates to: PVGLGTASLGLTSVSRPASCKTS*SFSLIT
Trigger: AGTAATCAGGGAGAAACTTCAGGAGGTCTTACAAGA...AGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp AATGGTGGAAAGACACCATCAAGAAATAGTGGTGTAGGGGTGGCTCTGAGCTGGGCAGAAGAACTCATCTaGGCTGCTGGACTCAGTATC +
Preference number: 4 (lower is better)
Translates to: NGGKTPSRNSGVGVALSWAEELI*AAGLSI
Trigger: GATACTGAGTCCAGCAGCTCAGATGAGTTCTTCTGC...CCAGCTCAGAGCCACCCCTACACCACTATTTCTTGATGGTGTCTTTCCACCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp TGGAGATCTGTCTCAGAGAGGAGGGTAAAGTGCCATAATGGTGGAAAGACACCACACAGTGAGCCTAGCTaGAACATGGTATGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: WRSVSERRVKCHNGGKTPHSEPS*NMVWAG
Trigger: ACCAGCCCATACCATGTTTCAGCTAGGCTCACTGTG...TGGTGTCTTTCCACCATTATGGCACTTTACCCTCCTCTCTGAGACAGATCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp GTAAGGCTGCGAGGTAGTAACAGGACAGGCAATGCCTCTCTTTTTATAGATCAATGGGTGAATCGAGGATaGGCCACAGGACAAGGGGAC +
Preference number: 4 (lower is better)
Translates to: VRLRGSNRTGNASLFIDQWVNRG*ATGQGD
Trigger: GTCCCCTTGTCCTGTGGCTCATCCTCGATTCACCCA...TTGATCTATAAAAAGAGAGGCATTGCCTGTCCTGTTACTACCTCGCAGCCTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp TGGAGATCTGTCTCAGAGAGGAGGGTAAAGTGCCATAATGGTGGAAAGACACCAGCCCGTTTCCTGAGGTaGGGACCCAGGTCTATTATT +
Preference number: 4 (lower is better)
Translates to: WRSVSERRVKCHNGGKTPARFLR*GPRSII
Trigger: AATAATAGACCTGGGTCCTCACCTCAGGAAACGGGC...TGGTGTCTTTCCACCATTATGGCACTTTACCCTCCTCTCTGAGACAGATCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp TCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGAAGGTTGGGCCAGGAATaGAAGTATCTGGTGACTACA +
Preference number: 4 (lower is better)
Translates to: SSPVGLGTASLGLTSVSRRLGQE*KYLVTT
Trigger: TGTAGTCACCAGATACTTGCATTCCTGGCCCAACCT...TCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS-3UTR GCA 90 bp TCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCATCAAATGCCTTCCATTaGTTCAGCTGGGGAATGAAG +
Preference number: 4 (lower is better)
Translates to: SPVGLGTASLGLTSVSRPSNAFH*FSWGMK
Trigger: CTTCATTCCCCAGCTGAAGCAATGGAAGGCATTTGA...TGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS-3UTR GCA 90 bp AATGGTGGAAAGACACCATCAAGAAATAGTGGTGTAGGGGTGGCTCTGAGCTGGAATCCCGGGCAGCCATaGCAGGATCATTCTGAAAGT +
Preference number: 4 (lower is better)
Translates to: NGGKTPSRNSGVGVALSWNPGQP*QDHSES
Trigger: ACTTTCAGAATGATCCTGGCATGGCTGCCCGGGATT...CCAGCTCAGAGCCACCCCTACACCACTATTTCTTGATGGTGTCTTTCCACCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp ACATGGTATGGGCTGGTCAAATGCAGGGCACTAATCTGTTCCCCAAAGACCAGATCTGAGTTCTCCAGATaGCTCTGTCTCTGGGGATCT +
Preference number: 4 (lower is better)
Translates to: TWYGLVKCRALICSPKTRSEFSR*LCLWGS
Trigger: AGATCCCCAGAGACAGAGGCATCTGGAGAACTCAGA...TCTGGTCTTTGGGGAACAGATTAGTGCCCTGCATTTGACCAGCCCATACCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp AATGGTGGAAAGACACCATCAAGAAATAGTGGTGTAGGGGTGGCTCTGAGCTGGTCTGAGTTCTCCAGATaGCTCTGTCTCTGGGGATCT +
Preference number: 4 (lower is better)
Translates to: NGGKTPSRNSGVGVALSWSEFSR*LCLWGS
Trigger: AGATCCCCAGAGACAGAGGCATCTGGAGAACTCAGA...CCAGCTCAGAGCCACCCCTACACCACTATTTCTTGATGGTGTCTTTCCACCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp GTCCCTGGGAAAACCCACCTACTTGAGTCCCAGGAGCTGTGTGTACATCTCTGTTGGAATCTAGGGAGGTaGTGTTCACAACATTCAGCA +
Preference number: 4 (lower is better)
Translates to: VPGKTHLLESQELCVHLCWNLGR*CSQHSA
Trigger: TGCTGAATGTTGTGAACAGCACCTCCCTAGATTCCA...ACAGAGATGTACACACAGCTCCTGGGACTCAAGTAGGTGGGTTTTCCCAGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp TTCAAATGGAACTTTGGTAGAAGGTACACTGGGACCCAGGGTAGCCCGGCAGCAGAGAGGAGGGTAAAGTaGCATAATGGTGGAAAGACA +
Preference number: 4 (lower is better)
Translates to: FKWNFGRRYTGTQGSPAAERRVK*HNGGKT
Trigger: TGTCTTTCCACCATTATGGCACTTTACCCTCCTCTC...TGCTGCCGGGCTACCCTGGGTCCCAGTGTACCTTCTACCAAAGTTCCATTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR GCA 90 bp TCCCCGCAGTACAAAACTGCATCAGTGGGTGAATCGAGGATGAGCCACAGGACATCAAATGCCTTCCATTaGTTCAGCTGTTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: SPQYKTASVGESRMSHRTSNAFH*FSCSSC
Trigger: GCAGGAAGAACAGCTGAAGCAATGGAAGGCATTTGA...TGTCCTGTGGCTCATCCTCGATTCACCCACTGATGCAGTTTTGTACTGCGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR CCA 90 bp AGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCAGTACAATCCTCCTCACCATACTaGGTATGGAAGCTTTTGTTG +
Preference number: 4 (lower is better)
Translates to: RFSHTPTEIAGVCLPAVQSSSPY*VWKLLL
Trigger: CAACAAAAGCTTCCATACCCAGTATGGTGAGGAGGA...TTGTACTGCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp TCAGTGTCTTTCATAGTCACTCAACTGGAGTCTTTTATAGTAAGGCTGCGAGGTACCGAGGCTACCGCCTaGACGTCCTTGTTCGGGGAA +
Preference number: 4 (lower is better)
Translates to: SVSFIVTQLESFIVRLRGTEATA*TSLFGE
Trigger: TTCCCCGAACAAGGACGTCCAGGCGGTAGCCTCGGT...ACCTCGCAGCCTTACTATAAAAGACTCCAGTTGAGTGACTATGAAAGACACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp ACATGGTATGGGCTGGTCAAATGCAGGGCACTAATCTGTTCCCCAAAGACCAGATTGGTCTCCTCTTTCTaGACCCAGGCTTTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: TWYGLVKCRALICSPKTRLVSSF*TQALLS
Trigger: ACTGAGCAAAGCCTGGGTCCAGAAAGAGGAGACCAA...TCTGGTCTTTGGGGAACAGATTAGTGCCCTGCATTTGACCAGCCCATACCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp AATGGTGGAAAGACACCATCAAGAAATAGTGGTGTAGGGGTGGCTCTGAGCTGGTTCTCCTGTGGGCCTTaGTACAGCTTCTCTTGGACT +
Preference number: 4 (lower is better)
Translates to: NGGKTPSRNSGVGVALSWFSCGP*YSFSWT
Trigger: AGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAA...CCAGCTCAGAGCCACCCCTACACCACTATTTCTTGATGGTGTCTTTCCACCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp TCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGAACAGTCTTGTCTGAATaGGAGTTTCCATTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SSPVGLGTASLGLTSVSRTVLSE*EFPLSS
Trigger: GGAGCTCAATGGAAACTCTCATTCAGACAAGACTGT...TCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS-3UTR TCA 90 bp TCCCCGCAGTACAAAACTGCATCAGTGGGTGAATCGAGGATGAGCCACAGGACAATTTGGCCATGCGTCTaGTTGTTTGGTTTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: SPQYKTASVGESRMSHRTIWPCV*LFGFPL
Trigger: AAGAGGAAAACCAAACAATCAGACGCATGGCCAAAT...TGTCCTGTGGCTCATCCTCGATTCACCCACTGATGCAGTTTTGTACTGCGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp AGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCAGTACAATCTTGTAAGACCTCCTaGAGTTTCTCCCTGATTACT +
Preference number: 4 (lower is better)
Translates to: RFSHTPTEIAGVCLPAVQSCKTS*SFSLIT
Trigger: AGTAATCAGGGAGAAACTTCAGGAGGTCTTACAAGA...TTGTACTGCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp TGTCCACCAAAAGGCCAGTTTGATGGGTCACAGTCCACACCTCAAGTTCTACAGGTACCTGGTCTGTCTTaGGGATCTGAAGGTAGTGAA +
Preference number: 4 (lower is better)
Translates to: CPPKGQFDGSQSTPQVLQVPGLS*GSEGSE
Trigger: TTCACTACCTTCAGATCCTCAAGACAGACCAGGTAC...CTGTAGAACTTGAGGTGTGGACTGTGACCCATCAAACTGGCCTTTTGGTGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp GTAAGGCTGCGAGGTAGTAACAGGACAGGCAATGCCTCTCTTTTTATAGATCAATTCAGGCAAGTCAGGTaGGGCTTTGGAGAGGCATGG +
Preference number: 4 (lower is better)
Translates to: VRLRGSNRTGNASLFIDQFRQVR*GFGEAW
Trigger: CCATGCCTCTCCAAAGCCTCACCTGACTTGCCTGAA...TTGATCTATAAAAAGAGAGGCATTGCCTGTCCTGTTACTACCTCGCAGCCTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp AAATTGCTGGTGTGTGCCTCCCCGCAGTACAAAACTGCATCAGTGGGTGAATCGAACCAAAAGCACTCTTaGCCAACAGGTTCTCCCATA +
Preference number: 4 (lower is better)
Translates to: KLLVCASPQYKTASVGESNQKHS*PTGSPI
Trigger: TATGGGAGAACCTGTTGGTCAAGAGTGCTTTTGGTT...CGATTCACCCACTGATGCAGTTTTGTACTGCGGGGAGGCACACACCAGCAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp CACCAAAAGGCCAGTTTGATGGGTCACAGTCCACACCTCAAGTTCTACAGAAATGAAAACCCACCTACTTaGGTCCCAGGAGCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: HQKASLMGHSPHLKFYRNENPPT*VPGAVC
Trigger: ACACACAGCTCCTGGGACTCAAGTAGGTGGGTTTTC...ATTTCTGTAGAACTTGAGGTGTGGACTGTGACCCATCAAACTGGCCTTTTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp TCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGAACCAACCCCAGCAACTaGAGGTCTTTGATAATCACT +
Preference number: 4 (lower is better)
Translates to: SSPVGLGTASLGLTSVSRTNPSN*RSLIIT
Trigger: AGTGATTATCAAAGACCTGCAGTTGCTGGGGTTGGT...TCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS-3UTR GCA 90 bp CAAAGACCAGAAATTGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGAAGGTTGGGCCAGGAATaGAAGTATCTGGTGACTACA +
Preference number: 4 (lower is better)
Translates to: QRPEIGSSPVGLGTASLGRLGQE*KYLVTT
Trigger: TGTAGTCACCAGATACTTGCATTCCTGGCCCAACCT...TCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCAATTTCTGGTCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR GCA 90 bp GTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTCTGTTGTTTACTTGTTCCTaGAGGCTTTCAATCACAGCA +
Preference number: 4 (lower is better)
Translates to: VGLGTASLGLTSVSRPALLFTCS*RLSITA
Trigger: TGCTGTGATTGAAAGCCTGCAGGAACAAGTAAACAA...CAGAGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp TGGGTATGGAAGCTTTTGTTGGGAGTGCTGAAATATTTGGCCATGCGTCTGATTTCTGCACATGTAGCCTaGTGTGTGCCCCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: WVWKLLLGVLKYLAMRLISAHVA*CVPQEQ
Trigger: CTGTTCCTGGGGCACACAGCAGGCTACATGTGCAGA...AATCAGACGCATGGCCAAATATTTCAGCACTCCCAACAAAAGCTTCCATACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR GCA 90 bp TCCCTGGGAAAACCCACCTACTTGAGTCCCAGGAGCTGTGTGTACATCTCTGTCCTTCATGCAAACATGTaGACACCCACAGATGTATAC +
Preference number: 4 (lower is better)
Translates to: SLGKPTYLSPRSCVYISVLHANM*TPTDVY
Trigger: GTATACATCTGTGGGTGTGCACATGTTTGCATGAAG...GACAGAGATGTACACACAGCTCCTGGGACTCAAGTAGGTGGGTTTTCCCAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp CCTCTTTCTGGTAGGAGACTCTGGCTGGGGTTCATGGGGACTTGGTCTCCTCTTACATTTAGAGCCAAATaGCCCCCTCTGAGAATATTT +
Preference number: 4 (lower is better)
Translates to: PLSGRRLWLGFMGTWSPLTFRAK*PPLRIF
Trigger: AAATATTCTCAGAGGGGGGCATTTGGCTCTAAATGT...AAGAGGAGACCAAGTCCCCATGAACCCCAGCCAGAGTCTCCTACCAGAAAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR CCA 90 bp TCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCATGTTCAGATTGGGACTaGACATCTTCACAATCCTGT +
Preference number: 4 (lower is better)
Translates to: SPVGLGTASLGLTSVSRPCSDWD*TSSQSC
Trigger: ACAGGATTGTGAAGATGTCCAGTCCCAATCTGAACA...TGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS-3UTR CCA 90 bp TGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTCACAATGTTCAGATTaGGACTGGACATCTTCACAA +
Preference number: 4 (lower is better)
Translates to: WLFSCGPWYSFSWTDLCVSQCSD*DWTSSQ
Trigger: TTGTGAAGATGTCCAGTCCCAATCTGAACATTGTGA...GACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS-3UTR CCA 90 bp CCAAAAGGCCAGTTTGATGGGTCACAGTCCACACCTCAAGTTCTACAGAAATTTGGGTTCATGGGGACTTaGTCTCCTCTTTCTGGACCC +
Preference number: 4 (lower is better)
Translates to: PKGQFDGSQSTPQVLQKFGFMGT*SPLSGP
Trigger: GGGTCCAGAAAGAGGAGACCAAGTCCCCATGAACCC...AAATTTCTGTAGAACTTGAGGTGTGGACTGTGACCCATCAAACTGGCCTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp CCAAAAGGCCAGTTTGATGGGTCACAGTCCACACCTCAAGTTCTACAGAAATTTGTAGGAGACTCTGGCTaGGGTTCATGGGGACTTGGT +
Preference number: 4 (lower is better)
Translates to: PKGQFDGSQSTPQVLQKFVGDSG*GSWGLG
Trigger: ACCAAGTCCCCATGAACCCCAGCCAGAGTCTCCTAC...AAATTTCTGTAGAACTTGAGGTGTGGACTGTGACCCATCAAACTGGCCTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp TTCAAATGGAACTTTGGTAGAAGGTACACTGGGACCCAGGGTAGCCCGGCAGCAGAATGTAGGCTGACCTaGACAGAAAATCCTATGTGT +
Preference number: 4 (lower is better)
Translates to: FKWNFGRRYTGTQGSPAAECRLT*TENPMC
Trigger: ACACATAGGATTTTCTGTCCAGGTCAGCCTACATTC...TGCTGCCGGGCTACCCTGGGTCCCAGTGTACCTTCTACCAAAGTTCCATTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR CAA 72 bp TATCTTCCTGGTAGGTCTGTCCACCAAAAGGCCAGTTaGATGGGTCACAGTCCACACCTCAAGTTCTACAGA +
Preference number: 4 (lower is better)
Translates to: YLPGRSVHQKAS*MGHSPHLKFYR
Trigger: TCTGTAGAACTTGAGGTGTGGACTGTGACCCATCAAACTGGCCTTTTGGTGGACAGACCTACCAGGAAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp TCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGAATTTGGCCATGCGTCTaGTTGTTTGGTTTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: SSPVGLGTASLGLTSVSRIWPCV*LFGFPL
Trigger: AAGAGGAAAACCAAACAATCAGACGCATGGCCAAAT...TCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp GGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTATCAGAAAAGTCTTTTaGGTCAGATATCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: GSSPVGLGTASLGLTSVSIRKVF*VRYLLL
Trigger: GAGGAGAAGATATCTGACTCAAAAGACTTTTCTGAT...AGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp CCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTATCAGAAAAGTCTTTTaGGTCAGATATCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: PVGLGTASLGLTSVSRPAIRKVF*VRYLLL
Trigger: GAGGAGAAGATATCTGACTCAAAAGACTTTTCTGAT...AGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp TCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAAGAACTCATCTGAGCTaGTGGACTCAGTATCAAAAT +
Preference number: 4 (lower is better)
Translates to: SPVGLGTASLGLTSVSRPRTHLS*WTQYQN
Trigger: ATTTTGATACTGAGTCCAGCAGCTCAGATGAGTTCT...TGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp AGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCAGTACAAAGAACTCATCTGAGCTaGTGGACTCAGTATCAAAAT +
Preference number: 4 (lower is better)
Translates to: RFSHTPTEIAGVCLPAVQRTHLS*WTQYQN
Trigger: ATTTTGATACTGAGTCCAGCAGCTCAGATGAGTTCT...TTGTACTGCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp AAATTGCTGGTGTGTGCCTCCCCGCAGTACAAAACTGCATCAGTGGGTGAATCGTGTTCAGATTGGGACTaGACATCTTCACAATCCTGT +
Preference number: 4 (lower is better)
Translates to: KLLVCASPQYKTASVGESCSDWD*TSSQSC
Trigger: ACAGGATTGTGAAGATGTCCAGTCCCAATCTGAACA...CGATTCACCCACTGATGCAGTTTTGTACTGCGGGGAGGCACACACCAGCAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR CCA 90 bp ACATGGTATGGGCTGGTCAAATGCAGGGCACTAATCTGTTCCCCAAAGACCAGATCACCATACTGGGTATaGAAGCTTTTGTTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: TWYGLVKCRALICSPKTRSPYWV*KLLLGV
Trigger: CACTCCCAACAAAAGCTTCCATACCCAGTATGGTGA...TCTGGTCTTTGGGGAACAGATTAGTGCCCTGCATTTGACCAGCCCATACCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp AATGGTGGAAAGACACCATCAAGAAATAGTGGTGTAGGGGTGGCTCTGAGCTGGTCCTCCTCACCATACTaGGTATGGAAGCTTTTGTTG +
Preference number: 4 (lower is better)
Translates to: NGGKTPSRNSGVGVALSWSSSPY*VWKLLL
Trigger: CAACAAAAGCTTCCATACCCAGTATGGTGAGGAGGA...CCAGCTCAGAGCCACCCCTACACCACTATTTCTTGATGGTGTCTTTCCACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp GGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTTCACAATCTTCTCTTTaGCGTTGTTTACTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: GSSPVGLGTASLGLTSVSSQSSL*RCLLVP
Trigger: AGGAACAAGTAAACAACGCCAAAGAGAAGATTGTGA...AGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp GTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTCTGTCACAATCTTCTCTTTaGCGTTGTTTACTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: VGLGTASLGLTSVSRPALSQSSL*RCLLVP
Trigger: AGGAACAAGTAAACAACGCCAAAGAGAAGATTGTGA...CAGAGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp TGTCCACCAAAAGGCCAGTTTGATGGGTCACAGTCCACACCTCAAGTTCTACAGCTGTTCTTCCTGCAGTaGATTGTAAAGGCAAGAAAG +
Preference number: 4 (lower is better)
Translates to: CPPKGQFDGSQSTPQVLQLFFLQ*IVKARK
Trigger: CTTTCTTGCCTTTACAATTCACTGCAGGAAGAACAG...CTGTAGAACTTGAGGTGTGGACTGTGACCCATCAAACTGGCCTTTTGGTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp AGTTTTACAGAATGTAGGCTGACCTGGACAGAAAATCCTATGTGTTCATTCAGCGCATCTTTTGGGGGCTaGAGGCAGCACTGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SFTECRLTWTENPMCSFSASFGG*RQHCSS
Trigger: GGAAGAACAGTGCTGCCTTCAGCCCCCAAAAGATGC...GCTGAATGAACACATAGGATTTTCTGTCCAGGTCAGCCTACATTCTGTAAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp CAAAGACCAGAAATTGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGAAGGGATGTAGATCTTTaGCTAAGACACAAGAGCAAC +
Preference number: 4 (lower is better)
Translates to: QRPEIGSSPVGLGTASLGRDVDL*LRHKSN
Trigger: GTTGCTCTTGTGTCTTAGTCAAAGATCTACATCCCT...TCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCAATTTCTGGTCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR TCA 90 bp TCAGTGTCTTTCATAGTCACTCAACTGGAGTCTTTTATAGTAAGGCTGCGAGGTACCAAAAGGCCAGTTTaGTGGGTCACAGTCCACACC +
Preference number: 4 (lower is better)
Translates to: SVSFIVTQLESFIVRLRGTKRPV*WVTVHT
Trigger: GGTGTGGACTGTGACCCATCAAACTGGCCTTTTGGT...ACCTCGCAGCCTTACTATAAAAGACTCCAGTTGAGTGACTATGAAAGACACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR GCA 90 bp TGGAGATCTGTCTCAGAGAGGAGGGTAAAGTGCCATAATGGTGGAAAGACACCAACCAACCCCAGCAACTaGAGGTCTTTGATAATCACT +
Preference number: 4 (lower is better)
Translates to: WRSVSERRVKCHNGGKTPTNPSN*RSLIIT
Trigger: AGTGATTATCAAAGACCTGCAGTTGCTGGGGTTGGT...TGGTGTCTTTCCACCATTATGGCACTTTACCCTCCTCTCTGAGACAGATCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR GCA 90 bp ACATGGTATGGGCTGGTCAAATGCAGGGCACTAATCTGTTCCCCAAAGACCAGACTTCATGCAAACATGTaGACACCCACAGATGTATAC +
Preference number: 4 (lower is better)
Translates to: TWYGLVKCRALICSPKTRLHANM*TPTDVY
Trigger: GTATACATCTGTGGGTGTGCACATGTTTGCATGAAG...TCTGGTCTTTGGGGAACAGATTAGTGCCCTGCATTTGACCAGCCCATACCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp GGCTACAACCTGAGTCTAAATGATCAGAAAAGTCTTTTGAGTCAGATATCTTCTTCCCTGTGGCTCTGGTaGTGGCTGAGTTCCTCGCAC +
Preference number: 4 (lower is better)
Translates to: GYNLSLNDQKSLLSQISSSLWLW*WLSSSH
Trigger: GTGCGAGGAACTCAGCCACCACCAGAGCCACAGGGA...AGAAGATATCTGACTCAAAAGACTTTTCTGATCATTTAGACTCAGGTTGTAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR CCA 90 bp TGGGTATGGAAGCTTTTGTTGGGAGTGCTGAAATATTTGGCCATGCGTCTGATTCACATGAATGAATGGTaGGCTGCTAGTGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: WVWKLLLGVLKYLAMRLIHMNEW*AASGGM
Trigger: CATGCCACCACTAGCAGCCCACCATTCATTCATGTG...AATCAGACGCATGGCCAAATATTTCAGCACTCCCAACAAAAGCTTCCATACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR TCA 90 bp TCAGTGTCTTTCATAGTCACTCAACTGGAGTCTTTTATAGTAAGGCTGCGAGGTAAGCGCTACTGTAAGTaGGACAACTGCCCAGTAAGG +
Preference number: 4 (lower is better)
Translates to: SVSFIVTQLESFIVRLRGKRYCK*DNCPVR
Trigger: CCTTACTGGGCAGTTGTCTCACTTACAGTAGCGCTT...ACCTCGCAGCCTTACTATAAAAGACTCCAGTTGAGTGACTATGAAAGACACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR TCA 90 bp GTAAGGCTGCGAGGTAGTAACAGGACAGGCAATGCCTCTCTTTTTATAGATCAAATAGGTGCACTCAGCTaGCATCAGCCTCACAATCTT +
Preference number: 4 (lower is better)
Translates to: VRLRGSNRTGNASLFIDQIGALS*HQPHNL
Trigger: AAGATTGTGAGGCTGATGTCAGCTGAGTGCACCTAT...TTGATCTATAAAAAGAGAGGCATTGCCTGTCCTGTTACTACCTCGCAGCCTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp TGGGTATGGAAGCTTTTGTTGGGAGTGCTGAAATATTTGGCCATGCGTCTGATTCCCAGCTTTCTTACATaGGCCTTGCTTTGTTGTCTC +
Preference number: 4 (lower is better)
Translates to: WVWKLLLGVLKYLAMRLIPSFLT*ALLCCL
Trigger: GAGACAACAAAGCAAGGCTCATGTAAGAAAGCTGGG...AATCAGACGCATGGCCAAATATTTCAGCACTCCCAACAAAAGCTTCCATACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR GCA 90 bp AGTTTTACAGAATGTAGGCTGACCTGGACAGAAAATCCTATGTGTTCATTCAGCCAAGGGAGGTCCCAATaGACAGCATGGACAGTCTTG +
Preference number: 4 (lower is better)
Translates to: SFTECRLTWTENPMCSFSQGRSQ*TAWTVL
Trigger: CAAGACTGTCCATGCTGTGCATTGGGACCTCCCTTG...GCTGAATGAACACATAGGATTTTCTGTCCAGGTCAGCCTACATTCTGTAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR GCA 90 bp AATGGTGGAAAGACACCATCAAGAAATAGTGGTGTAGGGGTGGCTCTGAGCTGGTACAGAAATTTCCCATaGATCTCTCCATCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: NGGKTPSRNSGVGVALSWYRNFP*ISPSVC
Trigger: ACAGACAGATGGAGAGATGCATGGGAAATTTCTGTA...CCAGCTCAGAGCCACCCCTACACCACTATTTCTTGATGGTGTCTTTCCACCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp GGCTACAACCTGAGTCTAAATGATCAGAAAAGTCTTTTGAGTCAGATATCTTCTGGAATCAGTAGTTTGTaGGGCCAGGCTGGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: GYNLSLNDQKSLLSQISSGISSL*GQAGAV
Trigger: GACAGCCCCAGCCTGGCCCCACAAACTACTGATTCC...AGAAGATATCTGACTCAAAAGACTTTTCTGATCATTTAGACTCAGGTTGTAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR TCA 90 bp GTAAGGCTGCGAGGTAGTAACAGGACAGGCAATGCCTCTCTTTTTATAGATCAAACAGTCTTGTCTGAATaGGAGTTTCCATTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: VRLRGSNRTGNASLFIDQTVLSE*EFPLSS
Trigger: GGAGCTCAATGGAAACTCTCATTCAGACAAGACTGT...TTGATCTATAAAAAGAGAGGCATTGCCTGTCCTGTTACTACCTCGCAGCCTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR GCA 90 bp AGTTTTACAGAATGTAGGCTGACCTGGACAGAAAATCCTATGTGTTCATTCAGCCATTTTGGAGCTGGCTaGAGGCTCAGAATCCAGAGT +
Preference number: 4 (lower is better)
Translates to: SFTECRLTWTENPMCSFSHFGAG*RLRIQS
Trigger: ACTCTGGATTCTGAGCCTGCAGCCAGCTCCAAAATG...GCTGAATGAACACATAGGATTTTCTGTCCAGGTCAGCCTACATTCTGTAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR CCA 90 bp AGTTTTACAGAATGTAGGCTGACCTGGACAGAAAATCCTATGTGTTCATTCAGCTTGGTCTCCTCTTTCTaGACCCAGGCTTTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: SFTECRLTWTENPMCSFSLVSSF*TQALLS
Trigger: ACTGAGCAAAGCCTGGGTCCAGAAAGAGGAGACCAA...GCTGAATGAACACATAGGATTTTCTGTCCAGGTCAGCCTACATTCTGTAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp TCAGTGTCTTTCATAGTCACTCAACTGGAGTCTTTTATAGTAAGGCTGCGAGGTTGGTTAACCACCAGATaGCAGTCACTGTTCGAGTAC +
Preference number: 4 (lower is better)
Translates to: SVSFIVTQLESFIVRLRGWLTTR*QSLFEY
Trigger: GTACTCGAACAGTGACTGCCATCTGGTGGTTAACCA...ACCTCGCAGCCTTACTATAAAAGACTCCAGTTGAGTGACTATGAAAGACACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR CCA 90 bp GTAAGGCTGCGAGGTAGTAACAGGACAGGCAATGCCTCTCTTTTTATAGATCAACCAGGTCTATTATTCTaGACTATAGGGGAGCACATC +
Preference number: 4 (lower is better)
Translates to: VRLRGSNRTGNASLFIDQPGLLF*TIGEHI
Trigger: GATGTGCTCCCCTATAGTCCAGAATAATAGACCTGG...TTGATCTATAAAAAGAGAGGCATTGCCTGTCCTGTTACTACCTCGCAGCCTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp CCAAAAGGCCAGTTTGATGGGTCACAGTCCACACCTCAAGTTCTACAGAAATTTTATTATGGTACCACTTaGACAGCACACACACAGCAC +
Preference number: 4 (lower is better)
Translates to: PKGQFDGSQSTPQVLQKFYYGTT*TAHTQH
Trigger: GTGCTGTGTGTGTGCTGTCCAAGTGGTACCATAATA...AAATTTCTGTAGAACTTGAGGTGTGGACTGTGACCCATCAAACTGGCCTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR CAA 72 bp CTCTCGGGAGTCATTTCTCTTTTATTATGGTACCACTaGGACAGCACACACACAGCACAAGAAACTGCAAAC +
Preference number: 4 (lower is better)
Translates to: LSGVISLLLWYH*DSTHTAQETAN
Trigger: GTTTGCAGTTTCTTGTGCTGTGTGTGTGCTGTCCAAGTGGTACCATAATAAAAGAGAAATGACTCCCGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR TCA 90 bp GGCTACAACCTGAGTCTAAATGATCAGAAAAGTCTTTTGAGTCAGATATCTTCTACCAAAAGGCCAGTTTaGTGGGTCACAGTCCACACC +
Preference number: 4 (lower is better)
Translates to: GYNLSLNDQKSLLSQISSTKRPV*WVTVHT
Trigger: GGTGTGGACTGTGACCCATCAAACTGGCCTTTTGGT...AGAAGATATCTGACTCAAAAGACTTTTCTGATCATTTAGACTCAGGTTGTAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR TCA 90 bp AGTTTTACAGAATGTAGGCTGACCTGGACAGAAAATCCTATGTGTTCATTCAGCCCAGATTACAGTTTCTaGAAAGACTCCTCTCGGGAG +
Preference number: 4 (lower is better)
Translates to: SFTECRLTWTENPMCSFSPDYSF*KDSSRE
Trigger: CTCCCGAGAGGAGTCTTTTCAGAAACTGTAATCTGG...GCTGAATGAACACATAGGATTTTCTGTCCAGGTCAGCCTACATTCTGTAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
3UTR CAA 72 bp TGGGTATGGAAGCTTTTGTTGGGAGTGCTGAAATATTaGGCCATGCGTCTGATTGTTTGGTTTTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: WVWKLLLGVLKY*AMRLIVWFSSS
Trigger: TGAAGAGGAAAACCAAACAATCAGACGCATGGCCAAATATTTCAGCACTCCCAACAAAAGCTTCCATACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR GCA 90 bp TGGGTATGGAAGCTTTTGTTGGGAGTGCTGAAATATTTGGCCATGCGTCTGATTTTGTTTACTTGTTCCTaGAGGCTTTCAATCACAGCA +
Preference number: 4 (lower is better)
Translates to: WVWKLLLGVLKYLAMRLILFTCS*RLSITA
Trigger: TGCTGTGATTGAAAGCCTGCAGGAACAAGTAAACAA...AATCAGACGCATGGCCAAATATTTCAGCACTCCCAACAAAAGCTTCCATACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR CCA 90 bp CACCAAAAGGCCAGTTTGATGGGTCACAGTCCACACCTCAAGTTCTACAGAAATTCACAATCTTCTCTTTaGCGTTGTTTACTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: HQKASLMGHSPHLKFYRNSQSSL*RCLLVP
Trigger: AGGAACAAGTAAACAACGCCAAAGAGAAGATTGTGA...ATTTCTGTAGAACTTGAGGTGTGGACTGTGACCCATCAAACTGGCCTTTTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR TCA 90 bp AGTTTTACAGAATGTAGGCTGACCTGGACAGAAAATCCTATGTGTTCATTCAGCTTACAGAATGTAGGCTaGCCTGGACAGAAAATCCTA +
Preference number: 4 (lower is better)
Translates to: SFTECRLTWTENPMCSFSLQNVG*PGQKIL
Trigger: TAGGATTTTCTGTCCAGGTCAGCCTACATTCTGTAA...GCTGAATGAACACATAGGATTTTCTGTCCAGGTCAGCCTACATTCTGTAAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CCA 90 bp GGCTACAACCTGAGTCTAAATGATCAGAAAAGTCTTTTGAGTCAGATATCTTCTTTCTTTGGGGATGGCTaGGAAAGGTTGAAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: GYNLSLNDQKSLLSQISSFFGDG*ERLKKE
Trigger: TTCTTTCTTCAACCTTTCCCAGCCATCCCCAAAGAA...AGAAGATATCTGACTCAAAAGACTTTTCTGATCATTTAGACTCAGGTTGTAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS GCA 90 bp CTCATCAGCGTCGGACCGCCGAGAAGCGCCAAGCCCGCTGCTATGTaGAGGACGCCCACGGTCCCCCGGCGTCTCGCGCGTTCGCGGGGC +
Preference number: 5 (lower is better)
Translates to: LISVGPPRSAKPAAM*RTPTVPRRLARSRG
Trigger: GCCCCGCGAACGCGCGAGACGCCGGGGGACCGTGGGCGTCCTGCACATAGCAGCGGGCTTGGCGCTTCTCGGCGGTCCGACGCTGATGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS GCA 90 bp CTGGTTCCTCATCAGCGTCGGACCGCCGAGAAGCGCCAAGCCCGCTaGTATGTGCAGGACGCCCACGGTCCCCCGGCGTCTCGCGCGTTC +
Preference number: 5 (lower is better)
Translates to: LVPHQRRTAEKRQAR*YVQDAHGPPASRAF
Trigger: GAACGCGCGAGACGCCGGGGGACCGTGGGCGTCCTGCACATAGCAGCGGGCTTGGCGCTTCTCGGCGGTCCGACGCTGATGAGGAACCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR CAA 90 bp TGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCATGGGGCAGCAGGACTaGGGGCCCGGCCAGAACCAG +
Preference number: 5 (lower is better)
Translates to: WLFSCGPWYSFSWTDLCVMGQQD*GPGQNQ
Trigger: CTGGTTCTGGCCGGGCCCCAAGTCCTGCTGCCCCAT...GACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp AGGCACAGCCTGAGGGCACTGGGGGCCACAGCTGCCACTGTTCAGGCAAGTCAGCACCAAAAGGCCAGTTaGATGGGTCACAGTCCACAC +
Preference number: 5 (lower is better)
Translates to: RHSLRALGATAATVQASQHQKAS*MGHSPH
Trigger: GTGTGGACTGTGACCCATCAAACTGGCCTTTTGGTG...CTGACTTGCCTGAACAGTGGCAGCTGTGGCCCCCAGTGCCCTCAGGCTGTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR CAA 90 bp TGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCACCGCCTGGACGTCCTaGTTCGGGGAAGAGGCAGGT +
Preference number: 5 (lower is better)
Translates to: WLFSCGPWYSFSWTDLCVTAWTS*FGEEAG
Trigger: ACCTGCCTCTTCCCCGAACAAGGACGTCCAGGCGGT...GACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp GGTACATCCGATCCCAGGGGAGAGATCTGGGAAGCCTGCGGGCGCATGGAGATCTCTAGACCAGCTCTGTaGCTTTTCACACCAGCGTGG +
Preference number: 5 (lower is better)
Translates to: GTSDPRGEIWEACGRMEISRPAL*LFTPAW
Trigger: CCACGCTGGTGTGAAAAGCAACAGAGCTGGTCTAGA...GATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTCCCCTGGGATCGGATGTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp TCCCCGCAGTACAAAACTGCATCAGTGGGTGAATCGAGGATGAGCCACAGGACAACCGCCTGGACGTCCTaGTTCGGGGAAGAGGCAGGT +
Preference number: 5 (lower is better)
Translates to: SPQYKTASVGESRMSHRTTAWTS*FGEEAG
Trigger: ACCTGCCTCTTCCCCGAACAAGGACGTCCAGGCGGT...TGTCCTGTGGCTCATCCTCGATTCACCCACTGATGCAGTTTTGTACTGCGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp GACCAACAGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCTCTGGAATCAGTAGTTaGTGGGGCCAGGCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: DQQVLPYPNRNCWCVPPRSGISS*WGQAGA
Trigger: AGCCCCAGCCTGGCCCCACAAACTACTGATTCCAGA...GCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCTGTTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp CAAAGACCAGAAATTGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGAATGGGGCAGCAGGACTaGGGGCCCGGCCAGAACCAG +
Preference number: 5 (lower is better)
Translates to: QRPEIGSSPVGLGTASLGMGQQD*GPGQNQ
Trigger: CTGGTTCTGGCCGGGCCCCAAGTCCTGCTGCCCCAT...TCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCAATTTCTGGTCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp ACAGTCAGGACCTCAGGTACATCCGATCCCAGGGGAGAGATCTGGGAAGCCTGCATACCCCAACAGAAATaGCTGGTGTGTGCCTCCCCG +
Preference number: 5 (lower is better)
Translates to: TVRTSGTSDPRGEIWEACIPQQK*LVCASP
Trigger: CGGGGAGGCACACACCAGCAATTTCTGTTGGGGTAT...GCAGGCTTCCCAGATCTCTCCCCTGGGATCGGATGTACCTGAGGTCCTGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp CCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTGTGCCAGTGTGGCCTTaGGCAGTGAGGAAGTGGAGG +
Preference number: 5 (lower is better)
Translates to: PVGLGTASLGLTSVSRPAVPVWP*AVRKWR
Trigger: CCTCCACTTCCTCACTGCCAAAGGCCACACTGGCAC...AGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp GTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTCTGGGGGTTCATGGGGACTaGGTCTCCTCTTTCTGGACC +
Preference number: 5 (lower is better)
Translates to: VGLGTASLGLTSVSRPALGVHGD*VSSFWT
Trigger: GGTCCAGAAAGAGGAGACCAAGTCCCCATGAACCCC...CAGAGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp GTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTCTGCAGGAACAGTCCTGTTaGCCCGATGCCCCACAGATG +
Preference number: 5 (lower is better)
Translates to: VGLGTASLGLTSVSRPALQEQSC*PDAPQM
Trigger: CATCTGTGGGGCATCGGGCAAACAGGACTGTTCCTG...CAGAGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp AGTTCTCCAGATGCCTCTGTCTCTGGGGATCTGAGCCGCCTCTTTCTGGTAGGACAGGAACAGTCCTGTTaGCCCGATGCCCCACAGATG +
Preference number: 5 (lower is better)
Translates to: SSPDASVSGDLSRLFLVGQEQSC*PDAPQM
Trigger: CATCTGTGGGGCATCGGGCAAACAGGACTGTTCCTG...TCCTACCAGAAAGAGGCGGCTCAGATCCCCAGAGACAGAGGCATCTGGAGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR CAA 90 bp TGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTCTGGAATCAGTAGTTaGTGGGGCCAGGCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: WLFSCGPWYSFSWTDLCVSGISS*WGQAGA
Trigger: AGCCCCAGCCTGGCCCCACAAACTACTGATTCCAGA...GACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp TCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGGGCTCTGTCTGGCTTaGTTTGCTGCCCTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: SPVGLGTASLGLTSVSRPGLCLA*FAALQG
Trigger: ACCCTGGAGGGCAGCAAACAAAGCCAGACAGAGCCC...TGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp TGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCAAGTCAGGTGAGGCTTaGGAGAGGCATGGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: WLFSCGPWYSFSWTDLCVKSGEA*ERHGAA
Trigger: TGCTGCCCCATGCCTCTCCAAAGCCTCACCTGACTT...GACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp CCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTAAGTCAGGTGAGGCTTaGGAGAGGCATGGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: PVGLGTASLGLTSVSRPAKSGEA*ERHGAA
Trigger: TGCTGCCCCATGCCTCTCCAAAGCCTCACCTGACTT...AGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp AGTTCTCCAGATGCCTCTGTCTCTGGGGATCTGAGCCGCCTCTTTCTGGTAGGAAAGTCAGGTGAGGCTTaGGAGAGGCATGGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: SSPDASVSGDLSRLFLVGKSGEA*ERHGAA
Trigger: TGCTGCCCCATGCCTCTCCAAAGCCTCACCTGACTT...TCCTACCAGAAAGAGGCGGCTCAGATCCCCAGAGACAGAGGCATCTGGAGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR CAA 90 bp AGGGGAGAGATCTGGGAAGCCTGCGGGCGCATGGAGATCTGTCTCAGAGAGGAGTACATGAGCCTTGCTTaGTTGTCTCGTCTGCCAAGC +
Preference number: 5 (lower is better)
Translates to: RGEIWEACGRMEICLREEYMSLA*LSRLPS
Trigger: GCTTGGCAGACGAGACAACAAAGCAAGGCTCATGTA...CTCCTCTCTGAGACAGATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp TTCAAATGGAACTTTGGTAGAAGGTACACTGGGACCCAGGGTAGCCCGGCAGCAGTGCCAGTGTGGCCTTaGGCAGTGAGGAAGTGGAGG +
Preference number: 5 (lower is better)
Translates to: FKWNFGRRYTGTQGSPAAVPVWP*AVRKWR
Trigger: CCTCCACTTCCTCACTGCCAAAGGCCACACTGGCAC...TGCTGCCGGGCTACCCTGGGTCCCAGTGTACCTTCTACCAAAGTTCCATTTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR CAA 90 bp GGTACATCCGATCCCAGGGGAGAGATCTGGGAAGCCTGCGGGCGCATGGAGATCGTCACAATGTTCAGATaGGGACTGGACATCTTCACA +
Preference number: 5 (lower is better)
Translates to: GTSDPRGEIWEACGRMEIVTMFR*GLDIFT
Trigger: TGTGAAGATGTCCAGTCCCAATCTGAACATTGTGAC...GATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTCCCCTGGGATCGGATGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR CAA 90 bp GTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTCTGAGCAGGAGCAGACCCTaGCATCCCCAAATGAGAGCA +
Preference number: 5 (lower is better)
Translates to: VGLGTASLGLTSVSRPALSRSRP*HPQMRA
Trigger: TGCTCTCATTTGGGGATGCAAGGGTCTGCTCCTGCT...CAGAGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS-3UTR CAA 90 bp TGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCGCCAGTACAAGGAGGTaGACCCCCACCATGATGGTT +
Preference number: 5 (lower is better)
Translates to: WLFSCGPWYSFSWTDLCVASTRR*TPTMMV
Trigger: AACCATCATGGTGGGGGTCAACCTCCTTGTACTGGC...GACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS-3UTR CAA 90 bp ACAGTCAGGACCTCAGGTACATCCGATCCCAGGGGAGAGATCTGGGAAGCCTGCAGTCCAAAGACCAGGTaGGGCCAGGAATGCAAGTAT +
Preference number: 5 (lower is better)
Translates to: TVRTSGTSDPRGEIWEACSPKTR*GQECKY
Trigger: ATACTTGCATTCCTGGCCCAACCTGGTCTTTGGACT...GCAGGCTTCCCAGATCTCTCCCCTGGGATCGGATGTACCTGAGGTCCTGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR CAA 90 bp CCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTTTCTGGACCCAGGCTTaGCTCAGTCCATGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: PVGLGTASLGLTSVSRPAFWTQA*LSPWLL
Trigger: CAGAAGCCATGGACTGAGCAAAGCCTGGGTCCAGAA...AGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp AGTTCTCCAGATGCCTCTGTCTCTGGGGATCTGAGCCGCCTCTTTCTGGTAGGATTCTGGACCCAGGCTTaGCTCAGTCCATGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: SSPDASVSGDLSRLFLVGFWTQA*LSPWLL
Trigger: CAGAAGCCATGGACTGAGCAAAGCCTGGGTCCAGAA...TCCTACCAGAAAGAGGCGGCTCAGATCCCCAGAGACAGAGGCATCTGGAGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR CAA 90 bp CCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTCTAAAGCCGAGCTCCTaGGAGAGGGGCATCTTTTGG +
Preference number: 5 (lower is better)
Translates to: PVGLGTASLGLTSVSRPALKPSS*ERGIFW
Trigger: CCAAAAGATGCCCCTCTCCAAGGAGCTCGGCTTTAG...AGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp TGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTCTGTCTGGCTTTGTTaGCTGCCCTCCAGGGTACCT +
Preference number: 5 (lower is better)
Translates to: WLFSCGPWYSFSWTDLCVSVWLC*LPSRVP
Trigger: AGGTACCCTGGAGGGCAGCAAACAAAGCCAGACAGA...GACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp AAATTGCTGGTGTGTGCCTCCCCGCAGTACAAAACTGCATCAGTGGGTGAATCGGGGCTCTGTCTGGCTTaGTTTGCTGCCCTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: KLLVCASPQYKTASVGESGLCLA*FAALQG
Trigger: ACCCTGGAGGGCAGCAAACAAAGCCAGACAGAGCCC...CGATTCACCCACTGATGCAGTTTTGTACTGCGGGGAGGCACACACCAGCAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp TGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCCTTCTCCTGTGGGCCTaGGTACAGCTTCTCTTGGAC +
Preference number: 5 (lower is better)
Translates to: WLFSCGPWYSFSWTDLCVLLLWA*VQLLLD
Trigger: GTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAG...GACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp ACCAACAGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCAGGAAAACCCACCTACTaGAGTCCCAGGAGCTGTGTG +
Preference number: 5 (lower is better)
Translates to: TNRFSHTPTEIAGVCLPAGKPTY*SPRSCV
Trigger: CACACAGCTCCTGGGACTCAAGTAGGTGGGTTTTCC...TGCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCTGTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp GTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTCTGGGAAAACCCACCTACTaGAGTCCCAGGAGCTGTGTG +
Preference number: 5 (lower is better)
Translates to: VGLGTASLGLTSVSRPALGKPTY*SPRSCV
Trigger: CACACAGCTCCTGGGACTCAAGTAGGTGGGTTTTCC...CAGAGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp AGGGGAGAGATCTGGGAAGCCTGCGGGCGCATGGAGATCTGTCTCAGAGAGGAGGGTTTCCTATGTCCATaGAGGGAGTGTTTCTGGGAT +
Preference number: 5 (lower is better)
Translates to: RGEIWEACGRMEICLREEGFLCP*RECFWD
Trigger: ATCCCAGAAACACTCCCTCAATGGACATAGGAAACC...CTCCTCTCTGAGACAGATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR CAA 90 bp GTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTCTGCTTGTCCGGGACCCTTaGGGTAAACACCTTGTAGAG +
Preference number: 5 (lower is better)
Translates to: VGLGTASLGLTSVSRPALLVRDP*GKHLVE
Trigger: CTCTACAAGGTGTTTACCCAAAGGGTCCCGGACAAG...CAGAGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS-3UTR CAA 90 bp GGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTCTTGTCCGGGACCCTTaGGGTAAACACCTTGTAGAG +
Preference number: 5 (lower is better)
Translates to: GSSPVGLGTASLGLTSVSLVRDP*GKHLVE
Trigger: CTCTACAAGGTGTTTACCCAAAGGGTCCCGGACAAG...AGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS-3UTR CAA 90 bp TCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCACTAAAGCCGAGCTCCTaGGAGAGGGGCATCTTTTGG +
Preference number: 5 (lower is better)
Translates to: SPVGLGTASLGLTSVSRPLKPSS*ERGIFW
Trigger: CCAAAAGATGCCCCTCTCCAAGGAGCTCGGCTTTAG...TGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp GTCCCTGGGAAAACCCACCTACTTGAGTCCCAGGAGCTGTGTGTACATCTCTGTCTAAAGCCGAGCTCCTaGGAGAGGGGCATCTTTTGG +
Preference number: 5 (lower is better)
Translates to: VPGKTHLLESQELCVHLCLKPSS*ERGIFW
Trigger: CCAAAAGATGCCCCTCTCCAAGGAGCTCGGCTTTAG...ACAGAGATGTACACACAGCTCCTGGGACTCAAGTAGGTGGGTTTTCCCAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp GTAAGGCTGCGAGGTAGTAACAGGACAGGCAATGCCTCTCTTTTTATAGATCAAATGGGGCAGCAGGACTaGGGGCCCGGCCAGAACCAG +
Preference number: 5 (lower is better)
Translates to: VRLRGSNRTGNASLFIDQMGQQD*GPGQNQ
Trigger: CTGGTTCTGGCCGGGCCCCAAGTCCTGCTGCCCCAT...TTGATCTATAAAAAGAGAGGCATTGCCTGTCCTGTTACTACCTCGCAGCCTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp TGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCAAGTTCACAATAGGCTaGGAGCGGGCCCACAGCTTT +
Preference number: 5 (lower is better)
Translates to: WLFSCGPWYSFSWTDLCVKFTIG*ERAHSF
Trigger: AAAGCTGTGGGCCCGCTCCAAGCCTATTGTGAACTT...GACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp TGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTCTAGACCAGCTCTGTaGCTTTTCACACCAGCGTGG +
Preference number: 5 (lower is better)
Translates to: WLFSCGPWYSFSWTDLCVSRPAL*LFTPAW
Trigger: CCACGCTGGTGTGAAAAGCAACAGAGCTGGTCTAGA...GACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp TCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCACTTCTCCTGTGGGCCTaGGTACAGCTTCTCTTGGAC +
Preference number: 5 (lower is better)
Translates to: SPVGLGTASLGLTSVSRPLLLWA*VQLLLD
Trigger: GTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAG...TGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp TCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGATTCAGAGGCCCCATTTaGGAGCTGGCTGCAGGCTCA +
Preference number: 5 (lower is better)
Translates to: SSPVGLGTASLGLTSVSRFRGPI*ELAAGS
Trigger: TGAGCCTGCAGCCAGCTCCAAAATGGGGCCTCTGAA...TCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR CAA 90 bp GTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTCTGCACCACATGCCCCTGTaGGTGTGTGCTTATTCACAG +
Preference number: 5 (lower is better)
Translates to: VGLGTASLGLTSVSRPALHHMPL*VCAYSQ
Trigger: CTGTGAATAAGCACACACCAACAGGGGCATGTGGTG...CAGAGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS CCA 90 bp GACATCCTTCAACTGGTGACCCTCCAAAGTCAGACATCCTTCAACTaGTCCCCTGCTGCGAGTGCATGCCATGTGAGTCAAGAGTGGACA +
Preference number: 5 (lower is better)
Translates to: DILQLVTLQSQTSFN*SPAASACHVSQEWT
Trigger: TGTCCACTCTTGACTCACATGGCATGCACTCGCAGCAGGGGACCAGTTGAAGGATGTCTGACTTTGGAGGGTCACCAGTTGAAGGATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000481907.1
CDS CCA 90 bp CAAATGAGAGCAATCCAAACATCGGAATACCGGGAAGCACAGAAGTaGGTGCTGGTCGAAGTGCAGGACACGTCTTTCCCTGTCACCGTC +
Preference number: 5 (lower is better)
Translates to: QMRAIQTSEYREAQK*VLVEVQDTSFPVTV
Trigger: GACGGTGACAGGGAAAGACGTGTCCTGCACTTCGACCAGCACCCACTTCTGTGCTTCCCGGTATTCCGATGTTTGGATTGCTCTCATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR CAA 90 bp TGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCAGTCCAAAGACCAGGTaGGGCCAGGAATGCAAGTAT +
Preference number: 5 (lower is better)
Translates to: WLFSCGPWYSFSWTDLCVSPKTR*GQECKY
Trigger: ATACTTGCATTCCTGGCCCAACCTGGTCTTTGGACT...GACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS-3UTR CAA 90 bp ACAGTCAGGACCTCAGGTACATCCGATCCCAGGGGAGAGATCTGGGAAGCCTGCGGAGTGCTGAAATATTaGGCCATGCGTCTGATTGTT +
Preference number: 5 (lower is better)
Translates to: TVRTSGTSDPRGEIWEACGVLKY*AMRLIV
Trigger: AACAATCAGACGCATGGCCAAATATTTCAGCACTCC...GCAGGCTTCCCAGATCTCTCCCCTGGGATCGGATGTACCTGAGGTCCTGACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp TCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGATTCTGGACCCAGGCTTaGCTCAGTCCATGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: SSPVGLGTASLGLTSVSRFWTQA*LSPWLL
Trigger: CAGAAGCCATGGACTGAGCAAAGCCTGGGTCCAGAA...TCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp TCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGATCTGTCTGGCTTTGTTaGCTGCCCTCCAGGGTACCT +
Preference number: 5 (lower is better)
Translates to: SSPVGLGTASLGLTSVSRSVWLC*LPSRVP
Trigger: AGGTACCCTGGAGGGCAGCAAACAAAGCCAGACAGA...TCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp AAATTGCTGGTGTGTGCCTCCCCGCAGTACAAAACTGCATCAGTGGGTGAATCGTCTGTCTGGCTTTGTTaGCTGCCCTCCAGGGTACCT +
Preference number: 5 (lower is better)
Translates to: KLLVCASPQYKTASVGESSVWLC*LPSRVP
Trigger: AGGTACCCTGGAGGGCAGCAAACAAAGCCAGACAGA...CGATTCACCCACTGATGCAGTTTTGTACTGCGGGGAGGCACACACCAGCAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp TCCCTGGGAAAACCCACCTACTTGAGTCCCAGGAGCTGTGTGTACATCTCTGTCAAGTTCACAATAGGCTaGGAGCGGGCCCACAGCTTT +
Preference number: 5 (lower is better)
Translates to: SLGKPTYLSPRSCVYISVKFTIG*ERAHSF
Trigger: AAAGCTGTGGGCCCGCTCCAAGCCTATTGTGAACTT...GACAGAGATGTACACACAGCTCCTGGGACTCAAGTAGGTGGGTTTTCCCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp TCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCATCTAGACCAGCTCTGTaGCTTTTCACACCAGCGTGG +
Preference number: 5 (lower is better)
Translates to: SPVGLGTASLGLTSVSRPSRPAL*LFTPAW
Trigger: CCACGCTGGTGTGAAAAGCAACAGAGCTGGTCTAGA...TGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp GACCAACAGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCGAACCAAAAGCACTCTaGACCAACAGGTTCTCCCAT +
Preference number: 5 (lower is better)
Translates to: DQQVLPYPNRNCWCVPPREPKAL*TNRFSH
Trigger: ATGGGAGAACCTGTTGGTCAAGAGTGCTTTTGGTTC...GCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCTGTTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp TGTCCACCAAAAGGCCAGTTTGATGGGTCACAGTCCACACCTCAAGTTCTACAGTCTGGTTCCCCTTCTTaGGGTGGGTCAGCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: CPPKGQFDGSQSTPQVLQSGSPS*GGSAFS
Trigger: GGAGAAGGCTGACCCACCCAAAGAAGGGGAACCAGA...CTGTAGAACTTGAGGTGTGGACTGTGACCCATCAAACTGGCCTTTTGGTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS GCA 90 bp GACCCTCCAAAGTCAGACATCCTTCAACTGGTCCCCTGCTGCGAGTaGATGCCATGTGAGTCAAGAGTGGACATCTTAGTAACCATCAGG +
Preference number: 5 (lower is better)
Translates to: DPPKSDILQLVPCCE*MPCESRVDILVTIR
Trigger: CCTGATGGTTACTAAGATGTCCACTCTTGACTCACATGGCATGCACTCGCAGCAGGGGACCAGTTGAAGGATGTCTGACTTTGGAGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000481907.1
CDS GCA 90 bp ACTGGTGACCCTCCAAAGTCAGACATCCTTCAACTGGTCCCCTGCTaGGAGTGCATGCCATGTGAGTCAAGAGTGGACATCTTAGTAACC +
Preference number: 5 (lower is better)
Translates to: TGDPPKSDILQLVPC*ECMPCESRVDILVT
Trigger: GGTTACTAAGATGTCCACTCTTGACTCACATGGCATGCACTCGCAGCAGGGGACCAGTTGAAGGATGTCTGACTTTGGAGGGTCACCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000481907.1
CDS CCA 90 bp CAAATGAGAGCAATCCAAACATCGGAATACCGGGAAGCACAGAAGTaGGTGCTGGTCGAAGTGCAGGACACGTCTTTCCCTGTCACACTG +
Preference number: 5 (lower is better)
Translates to: QMRAIQTSEYREAQK*VLVEVQDTSFPVTL
Trigger: CAGTGTGACAGGGAAAGACGTGTCCTGCACTTCGACCAGCACCCACTTCTGTGCTTCCCGGTATTCCGATGTTTGGATTGCTCTCATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461057.1
CDS CCA 90 bp TCTTTCCCTGTCACCGTCATACTGACACTGAGAATCTGGAGGCACTaGATGGGATCAGTCAGCACCCACGTCATGAGCAGGATCACATCA +
Preference number: 5 (lower is better)
Translates to: SFPVTVILTLRIWRH*MGSVSTHVMSRITS
Trigger: TGATGTGATCCTGCTCATGACGTGGGTGCTGACTGATCCCATCCAGTGCCTCCAGATTCTCAGTGTCAGTATGACGGTGACAGGGAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR CAA 90 bp AATGGTGGAAAGACACCATCAAGAAATAGTGGTGTAGGGGTGGCTCTGAGCTGGAGCAGGAGCAGACCCTaGCATCCCCAAATGAGAGCA +
Preference number: 5 (lower is better)
Translates to: NGGKTPSRNSGVGVALSWSRSRP*HPQMRA
Trigger: TGCTCTCATTTGGGGATGCAAGGGTCTGCTCCTGCT...CCAGCTCAGAGCCACCCCTACACCACTATTTCTTGATGGTGTCTTTCCACCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR CAA 90 bp ACAGTCAGGACCTCAGGTACATCCGATCCCAGGGGAGAGATCTGGGAAGCCTGCTTTGGCGTTGTTTACTaGTTCCTGCAGGCTTTCAAT +
Preference number: 5 (lower is better)
Translates to: TVRTSGTSDPRGEIWEACFGVVY*FLQAFN
Trigger: ATTGAAAGCCTGCAGGAACAAGTAAACAACGCCAAA...GCAGGCTTCCCAGATCTCTCCCCTGGGATCGGATGTACCTGAGGTCCTGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp ACAGTCAGGACCTCAGGTACATCCGATCCCAGGGGAGAGATCTGGGAAGCCTGCCTCACAATCTTCTCTTaGGCGTTGTTTACTTGTTCC +
Preference number: 5 (lower is better)
Translates to: TVRTSGTSDPRGEIWEACLTIFS*ALFTCS
Trigger: GGAACAAGTAAACAACGCCAAAGAGAAGATTGTGAG...GCAGGCTTCCCAGATCTCTCCCCTGGGATCGGATGTACCTGAGGTCCTGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp TCTGTGTCTAGACCAGCTCTGTTGCTTTTCACACCAGCGTGGGTTTCAAGTCATGGGGTTCATGGGGACTaGGTCTCCTCTTTCTGGACC +
Preference number: 5 (lower is better)
Translates to: SVSRPALLLFTPAWVSSHGVHGD*VSSFWT
Trigger: GGTCCAGAAAGAGGAGACCAAGTCCCCATGAACCCC...ATGACTTGAAACCCACGCTGGTGTGAAAAGCAACAGAGCTGGTCTAGACACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR CAA 90 bp CACCAAAAGGCCAGTTTGATGGGTCACAGTCCACACCTCAAGTTCTACAGAAATGGGCTCTGTCTGGCTTaGTTTGCTGCCCTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: HQKASLMGHSPHLKFYRNGLCLA*FAALQG
Trigger: ACCCTGGAGGGCAGCAAACAAAGCCAGACAGAGCCC...ATTTCTGTAGAACTTGAGGTGTGGACTGTGACCCATCAAACTGGCCTTTTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp AGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCAGTACAATACATGAGCCTTGCTTaGTTGTCTCGTCTGCCAAGC +
Preference number: 5 (lower is better)
Translates to: RFSHTPTEIAGVCLPAVQYMSLA*LSRLPS
Trigger: GCTTGGCAGACGAGACAACAAAGCAAGGCTCATGTA...TTGTACTGCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS TCA 90 bp GTCAGACATCCTTCAACTGGTCCCCTGCTGCGAGTGCATGCCATGTaGGTCAAGAGTGGACATCTTAGTAACCATCAGGCTACACAAGGT +
Preference number: 5 (lower is better)
Translates to: VRHPSTGPLLRVHAM*VKSGHLSNHQATQG
Trigger: ACCTTGTGTAGCCTGATGGTTACTAAGATGTCCACTCTTGACTCACATGGCATGCACTCGCAGCAGGGGACCAGTTGAAGGATGTCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000481907.1
CDS GCA 90 bp AAGATCCCTCCAGATGTGAGTCCAAAGACCAGGTTGGGCCAGGAATaGAAGTATCTGGTGACTACAAAAAGCAGCCCAGCAGCCAGTACA +
Preference number: 5 (lower is better)
Translates to: KIPPDVSPKTRLGQE*KYLVTTKSSPAAST
Trigger: TGTACTGGCTGCTGGGCTGCTTTTTGTAGTCACCAGATACTTGCATTCCTGGCCCAACCTGGTCTTTGGACTCACATCTGGAGGGATCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS GCA 90 bp TCAACTGGTGACCCTCCAAAGTCAGACATCCTTCAACTGGTCCCCTaGTGCGAGTGCATGCCATGTGAGTCAAGAGTGGACATCTTAGTA +
Preference number: 5 (lower is better)
Translates to: STGDPPKSDILQLVP*CECMPCESRVDILV
Trigger: TACTAAGATGTCCACTCTTGACTCACATGGCATGCACTCGCAGCAGGGGACCAGTTGAAGGATGTCTGACTTTGGAGGGTCACCAGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000481907.1
CDS-3UTR CAA 90 bp TCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCATTGATAATCACTCTCTaGTCCGGGACCCTTTGGGTA +
Preference number: 5 (lower is better)
Translates to: SPVGLGTASLGLTSVSRPLIITL*SGTLWV
Trigger: TACCCAAAGGGTCCCGGACAAGAGAGTGATTATCAA...TGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS-3UTR CAA 90 bp TGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCAGCAACTGCAGGTCTTaGATAATCACTCTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: WLFSCGPWYSFSWTDLCVSNCRS*IITLLS
Trigger: GGACAAGAGAGTGATTATCAAAGACCTGCAGTTGCT...GACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS-3UTR CAA 90 bp TGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTTCAAATGCCTTCCATaGCTTCAGCTGGGGAATGAA +
Preference number: 5 (lower is better)
Translates to: WLFSCGPWYSFSWTDLCVFKCLP*LQLGNE
Trigger: TTCATTCCCCAGCTGAAGCAATGGAAGGCATTTGAA...GACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS-3UTR CAA 90 bp CCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTGGAGTGCTGAAATATTaGGCCATGCGTCTGATTGTT +
Preference number: 5 (lower is better)
Translates to: PVGLGTASLGLTSVSRPAGVLKY*AMRLIV
Trigger: AACAATCAGACGCATGGCCAAATATTTCAGCACTCC...AGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp TGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCATCTTCTCTTTGGCGTaGTTTACTTGTTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: WLFSCGPWYSFSWTDLCVIFSLA*FTCSCR
Trigger: CCTGCAGGAACAAGTAAACAACGCCAAAGAGAAGAT...GACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp ACCAACAGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCAATCTTCTCTTTGGCGTaGTTTACTTGTTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: TNRFSHTPTEIAGVCLPAIFSLA*FTCSCR
Trigger: CCTGCAGGAACAAGTAAACAACGCCAAAGAGAAGAT...TGCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCTGTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp TCAGTGTCTTTCATAGTCACTCAACTGGAGTCTTTTATAGTAAGGCTGCGAGGTACCGCCTGGACGTCCTaGTTCGGGGAAGAGGCAGGT +
Preference number: 5 (lower is better)
Translates to: SVSFIVTQLESFIVRLRGTAWTS*FGEEAG
Trigger: ACCTGCCTCTTCCCCGAACAAGGACGTCCAGGCGGT...ACCTCGCAGCCTTACTATAAAAGACTCCAGTTGAGTGACTATGAAAGACACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp AGGGGAGAGATCTGGGAAGCCTGCGGGCGCATGGAGATCTGTCTCAGAGAGGAGGATCAGAAAAGTCTTTaGAGTCAGATATCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: RGEIWEACGRMEICLREEDQKSL*SQISSP
Trigger: AGGAGAAGATATCTGACTCAAAAGACTTTTCTGATC...CTCCTCTCTGAGACAGATCTCCATGCGCCCGCAGGCTTCCCAGATCTCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp CACCAAAAGGCCAGTTTGATGGGTCACAGTCCACACCTCAAGTTCTACAGAAATCAGGAACAGTCCTGTTaGCCCGATGCCCCACAGATG +
Preference number: 5 (lower is better)
Translates to: HQKASLMGHSPHLKFYRNQEQSC*PDAPQM
Trigger: CATCTGTGGGGCATCGGGCAAACAGGACTGTTCCTG...ATTTCTGTAGAACTTGAGGTGTGGACTGTGACCCATCAAACTGGCCTTTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp CAAAGACCAGAAATTGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACACCAAAAGGCCAGTTaGATGGGTCACAGTCCACAC +
Preference number: 5 (lower is better)
Translates to: QRPEIGSSPVGLGTASLGHQKAS*MGHSPH
Trigger: GTGTGGACTGTGACCCATCAAACTGGCCTTTTGGTG...TCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCAATTTCTGGTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp TCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGTCACAATGTTCAGATaGGGACTGGACATCTTCACA +
Preference number: 5 (lower is better)
Translates to: SPVGLGTASLGLTSVSRPVTMFR*GLDIFT
Trigger: TGTGAAGATGTCCAGTCCCAATCTGAACATTGTGAC...TGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS-3UTR CAA 90 bp TCCCTGGGAAAACCCACCTACTTGAGTCCCAGGAGCTGTGTGTACATCTCTGTCAGCAACTGCAGGTCTTaGATAATCACTCTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: SLGKPTYLSPRSCVYISVSNCRS*IITLLS
Trigger: GGACAAGAGAGTGATTATCAAAGACCTGCAGTTGCT...GACAGAGATGTACACACAGCTCCTGGGACTCAAGTAGGTGGGTTTTCCCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR CAA 90 bp TCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGGAGTGCTGAAATATTaGGCCATGCGTCTGATTGTT +
Preference number: 5 (lower is better)
Translates to: SPVGLGTASLGLTSVSRPGVLKY*AMRLIV
Trigger: AACAATCAGACGCATGGCCAAATATTTCAGCACTCC...TGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp GGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTTGGGTATGGAAGCTTTaGTTGGGAGTGCTGAAATAT +
Preference number: 5 (lower is better)
Translates to: GSSPVGLGTASLGLTSVSWVWKL*LGVLKY
Trigger: ATATTTCAGCACTCCCAACAAAAGCTTCCATACCCA...AGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp ACCAACAGGTTCTCCCATACCCCAACAGAAATTGCTGGTGTGTGCCTCCCCGCATTTGGCGTTGTTTACTaGTTCCTGCAGGCTTTCAAT +
Preference number: 5 (lower is better)
Translates to: TNRFSHTPTEIAGVCLPAFGVVY*FLQAFN
Trigger: ATTGAAAGCCTGCAGGAACAAGTAAACAACGCCAAA...TGCGGGGAGGCACACACCAGCAATTTCTGTTGGGGTATGGGAGAACCTGTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp GTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTCTGCTCACAATCTTCTCTTaGGCGTTGTTTACTTGTTCC +
Preference number: 5 (lower is better)
Translates to: VGLGTASLGLTSVSRPALLTIFS*ALFTCS
Trigger: GGAACAAGTAAACAACGCCAAAGAGAAGATTGTGAG...CAGAGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp CTCCAGGGTTTCCTATGTCCATTGAGGGAGTGTTTCTGGGATAAGAGGCTTCTTAAGTTCACAATAGGCTaGGAGCGGGCCCACAGCTTT +
Preference number: 5 (lower is better)
Translates to: LQGFLCPLRECFWDKRLLKFTIG*ERAHSF
Trigger: AAAGCTGTGGGCCCGCTCCAAGCCTATTGTGAACTT...AAGAAGCCTCTTATCCCAGAAACACTCCCTCAATGGACATAGGAAACCCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR CAA 90 bp CACCAAAAGGCCAGTTTGATGGGTCACAGTCCACACCTCAAGTTCTACAGAAATATACCCCAACAGAAATaGCTGGTGTGTGCCTCCCCG +
Preference number: 5 (lower is better)
Translates to: HQKASLMGHSPHLKFYRNIPQQK*LVCASP
Trigger: CGGGGAGGCACACACCAGCAATTTCTGTTGGGGTAT...ATTTCTGTAGAACTTGAGGTGTGGACTGTGACCCATCAAACTGGCCTTTTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp ACAGTCAGGACCTCAGGTACATCCGATCCCAGGGGAGAGATCTGGGAAGCCTGCCACAAAAATATGATATaGCCAAGTACTATGCTGGAC +
Preference number: 5 (lower is better)
Translates to: TVRTSGTSDPRGEIWEACHKNMI*PSTMLD
Trigger: GTCCAGCATAGTACTTGGCAATATCATATTTTTGTG...GCAGGCTTCCCAGATCTCTCCCCTGGGATCGGATGTACCTGAGGTCCTGACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp TGGAGATCTGTCTCAGAGAGGAGGGTAAAGTGCCATAATGGTGGAAAGACACCAATGAGCCTTGCTTTGTaGTCTCGTCTGCCAAGCGTC +
Preference number: 5 (lower is better)
Translates to: WRSVSERRVKCHNGGKTPMSLAL*SRLPSV
Trigger: GACGCTTGGCAGACGAGACAACAAAGCAAGGCTCAT...TGGTGTCTTTCCACCATTATGGCACTTTACCCTCCTCTCTGAGACAGATCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS GCA 90 bp GTCAGCCAGAATTATCTAGCAAATAGCCAGGTAGCAGTGCTTCACTaGTTTTGCAGAAACCCTAACTCACCCAGACTGGTTCTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: VSQNYLANSQVAVLH*FCRNPNSPRLVLLC
Trigger: GCACAGCAGAACCAGTCTGGGTGAGTTAGGGTTTCTGCAAAAGCAGTGAAGCACTGCTACCTGGCTATTTGCTAGATAATTCTGGCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481907.1
CDS CCA 90 bp TTCAGAGCAGTTTATTTCAGGCTCCATGTCACCACATGCCCCTGTTaGTGTGTGCTTATTCACAGTCTTGGTTACCCACTGGTAGGGATG +
Preference number: 5 (lower is better)
Translates to: FRAVYFRLHVTTCPC*CVLIHSLGYPLVGM
Trigger: CATCCCTACCAGTGGGTAACCAAGACTGTGAATAAGCACACACCAACAGGGGCATGTGGTGACATGGAGCCTGAAATAAACTGCTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000481907.1
CDS-3UTR CAA 90 bp CCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTGGTTTCAAGTCATCTTaGAAGTTCACAATAGGCTTG +
Preference number: 5 (lower is better)
Translates to: PVGLGTASLGLTSVSRPAGFKSS*KFTIGL
Trigger: CAAGCCTATTGTGAACTTCAAAGATGACTTGAAACC...AGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp GTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGACCAGCTCTGGGTTTCAAGTCATCTTaGAAGTTCACAATAGGCTTG +
Preference number: 5 (lower is better)
Translates to: VGLGTASLGLTSVSRPALGFKSS*KFTIGL
Trigger: CAAGCCTATTGTGAACTTCAAAGATGACTTGAAACC...CAGAGCTGGTCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp GTAAGGCTGCGAGGTAGTAACAGGACAGGCAATGCCTCTCTTTTTATAGATCAACTTCTCCTGTGGGCCTaGGTACAGCTTCTCTTGGAC +
Preference number: 5 (lower is better)
Translates to: VRLRGSNRTGNASLFIDQLLLWA*VQLLLD
Trigger: GTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAG...TTGATCTATAAAAAGAGAGGCATTGCCTGTCCTGTTACTACCTCGCAGCCTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp CACCAAAAGGCCAGTTTGATGGGTCACAGTCCACACCTCAAGTTCTACAGAAATATGAGCCTTGCTTTGTaGTCTCGTCTGCCAAGCGTC +
Preference number: 5 (lower is better)
Translates to: HQKASLMGHSPHLKFYRNMSLAL*SRLPSV
Trigger: GACGCTTGGCAGACGAGACAACAAAGCAAGGCTCAT...ATTTCTGTAGAACTTGAGGTGTGGACTGTGACCCATCAAACTGGCCTTTTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS GCA 90 bp GTCACACAATTCAGAGCAGTTTATTTCAGGCTCCATGTCACCACATaGCCCTGTTGGTGTGTGCTTATTCACAGTCTTGGTTACCCACTG +
Preference number: 5 (lower is better)
Translates to: VTQFRAVYFRLHVTT*PCWCVLIHSLGYPL
Trigger: CAGTGGGTAACCAAGACTGTGAATAAGCACACACCAACAGGGGCATGTGGTGACATGGAGCCTGAAATAAACTGCTCTGAATTGTGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000481907.1
CDS GCA 90 bp CAGAATTATCTAGCAAATAGCCAGGTAGCAGTGCTTCACTGCTTTTaGAGAAACCCTAACTCACCCAGACTGGTTCTGCTGTGCTGTCCT +
Preference number: 5 (lower is better)
Translates to: QNYLANSQVAVLHCF*RNPNSPRLVLLCCP
Trigger: AGGACAGCACAGCAGAACCAGTCTGGGTGAGTTAGGGTTTCTGCAAAAGCAGTGAAGCACTGCTACCTGGCTATTTGCTAGATAATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481907.1
CDS CCA 90 bp TTCCCCTTCTCAACAGGTAGACTATTTCAGAGGGAATGTCTCATGTaGTTTAATCCTGTAGTGGGAGACCAGATAGTGGCTTGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: FPFSTGRLFQRECLM*FNPVVGDQIVACAA
Trigger: GGCAGCACAAGCCACTATCTGGTCTCCCACTACAGGATTAAACCACATGAGACATTCCCTCTGAAATAGTCTACCTGTTGAGAAGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481907.1
CDS-3UTR CAA 90 bp TCAGTGTCTTTCATAGTCACTCAACTGGAGTCTTTTATAGTAAGGCTGCGAGGTGCCAGTACAAGGAGGTaGACCCCCACCATGATGGTT +
Preference number: 5 (lower is better)
Translates to: SVSFIVTQLESFIVRLRGASTRR*TPTMMV
Trigger: AACCATCATGGTGGGGGTCAACCTCCTTGTACTGGC...ACCTCGCAGCCTTACTATAAAAGACTCCAGTTGAGTGACTATGAAAGACACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR CAA 90 bp TCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTAGATTTGGCGTTGTTTACTaGTTCCTGCAGGCTTTCAAT +
Preference number: 5 (lower is better)
Translates to: SSPVGLGTASLGLTSVSRFGVVY*FLQAFN
Trigger: ATTGAAAGCCTGCAGGAACAAGTAAACAACGCCAAA...TCTAGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp AAATTGCTGGTGTGTGCCTCCCCGCAGTACAAAACTGCATCAGTGGGTGAATCGCTCACAATCTTCTCTTaGGCGTTGTTTACTTGTTCC +
Preference number: 5 (lower is better)
Translates to: KLLVCASPQYKTASVGESLTIFS*ALFTCS
Trigger: GGAACAAGTAAACAACGCCAAAGAGAAGATTGTGAG...CGATTCACCCACTGATGCAGTTTTGTACTGCGGGGAGGCACACACCAGCAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp GGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACTGACCTCTGTGTCTGATCAGAAAAGTCTTTaGAGTCAGATATCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: GSSPVGLGTASLGLTSVSDQKSL*SQISSP
Trigger: AGGAGAAGATATCTGACTCAAAAGACTTTTCTGATC...AGACACAGAGGTCAGTCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461057.1
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp CAAAGACCAGAAATTGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGATTATTATGGTACCACTaGGACAGCACACACACAGCA +
Preference number: 5 (lower is better)
Translates to: QRPEIGSSPVGLGTASLGLLWYH*DSTHTA
Trigger: TGCTGTGTGTGTGCTGTCCAAGTGGTACCATAATAA...TCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCAATTTCTGGTCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR CAA 90 bp CAAAGACCAGAAATTGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGAAGAAGGCTAGAAGGATaGCCAGATTTAGAGTCCACA +
Preference number: 5 (lower is better)
Translates to: QRPEIGSSPVGLGTASLGRRLEG*PDLEST
Trigger: TGTGGACTCTAAATCTGGCAATCCTTCTAGCCTTCT...TCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCAATTTCTGGTCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS TCA 90 bp CCACTAAAACATCCTGAATCCCAAAGAGGTAAGCGCTACTGTAAGTaGGACAACTGCCCAGTAAGGTCACAATGTTCAGATTGGGACTGG +
Preference number: 5 (lower is better)
Translates to: PLKHPESQRGKRYCK*DNCPVRSQCSDWDW
Trigger: CCAGTCCCAATCTGAACATTGTGACCTTACTGGGCAGTTGTCTCACTTACAGTAGCGCTTACCTCTTTGGGATTCAGGATGTTTTAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS-3UTR CAA 90 bp CAAAGACCAGAAATTGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGAGGTTTCAAGTCATCTTaGAAGTTCACAATAGGCTTG +
Preference number: 5 (lower is better)
Translates to: QRPEIGSSPVGLGTASLGGFKSS*KFTIGL
Trigger: CAAGCCTATTGTGAACTTCAAAGATGACTTGAAACC...TCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCAATTTCTGGTCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS TCA 90 bp GCTTATTCACAGTCTTGGTTACCCACTGGTAGGGATGTAGATCTTTaGCTAAGACACAAGAGCAACTCAAATCTTTTCTTCAGAGGCCCC +
Preference number: 5 (lower is better)
Translates to: AYSQSWLPTGRDVDL*LRHKSNSNLFFRGP
Trigger: GGGGCCTCTGAAGAAAAGATTTGAGTTGCTCTTGTGTCTTAGTCAAAGATCTACATCCCTACCAGTGGGTAACCAAGACTGTGAATAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000481907.1
CDS-3UTR CAA 90 bp CCAAAAGGCCAGTTTGATGGGTCACAGTCCACACCTCAAGTTCTACAGAAATTTTTCAAATGCCTTCCATaGCTTCAGCTGGGGAATGAA +
Preference number: 5 (lower is better)
Translates to: PKGQFDGSQSTPQVLQKFFKCLP*LQLGNE
Trigger: TTCATTCCCCAGCTGAAGCAATGGAAGGCATTTGAA...AAATTTCTGTAGAACTTGAGGTGTGGACTGTGACCCATCAAACTGGCCTTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS-3UTR CAA 90 bp CACCAAAAGGCCAGTTTGATGGGTCACAGTCCACACCTCAAGTTCTACAGAAATTGGGTATGGAAGCTTTaGTTGGGAGTGCTGAAATAT +
Preference number: 5 (lower is better)
Translates to: HQKASLMGHSPHLKFYRNWVWKL*LGVLKY
Trigger: ATATTTCAGCACTCCCAACAAAAGCTTCCATACCCA...ATTTCTGTAGAACTTGAGGTGTGGACTGTGACCCATCAAACTGGCCTTTTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp CAAAGACCAGAAATTGGCTCTTCTCCTGTGGGCCTTGGTACAGCTTCTCTTGGACACAAAAATATGATATaGCCAAGTACTATGCTGGAC +
Preference number: 5 (lower is better)
Translates to: QRPEIGSSPVGLGTASLGHKNMI*PSTMLD
Trigger: GTCCAGCATAGTACTTGGCAATATCATATTTTTGTG...TCCAAGAGAAGCTGTACCAAGGCCCACAGGAGAAGAGCCAATTTCTGGTCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp CACCAAAAGGCCAGTTTGATGGGTCACAGTCCACACCTCAAGTTCTACAGAAATTGTTCAAATGGAACTTaGGTAGAAGGTACACTGGGA +
Preference number: 5 (lower is better)
Translates to: HQKASLMGHSPHLKFYRNCSNGT*VEGTLG
Trigger: TCCCAGTGTACCTTCTACCAAAGTTCCATTTGAACA...ATTTCTGTAGAACTTGAGGTGTGGACTGTGACCCATCAAACTGGCCTTTTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS TCA 90 bp CTATGTGTGATGAGAAACTGGGCTGCTTACCTGTTCTTCCTGCAGTaGATTGTAAAGGCAAGAAAGAAAAGTATCAGCAGAAGTCCACAG +
Preference number: 5 (lower is better)
Translates to: LCVMRNWAAYLFFLQ*IVKARKKSISRSPQ
Trigger: CTGTGGACTTCTGCTGATACTTTTCTTTCTTGCCTTTACAATTCACTGCAGGAAGAACAGGTAAGCAGCCCAGTTTCTCATCACACATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481907.1
CDS-3UTR CAA 90 bp AGTTTTACAGAATGTAGGCTGACCTGGACAGAAAATCCTATGTGTTCATTCAGCGAACCAAAAGCACTCTaGACCAACAGGTTCTCCCAT +
Preference number: 5 (lower is better)
Translates to: SFTECRLTWTENPMCSFSEPKAL*TNRFSH
Trigger: ATGGGAGAACCTGTTGGTCAAGAGTGCTTTTGGTTC...GCTGAATGAACACATAGGATTTTCTGTCCAGGTCAGCCTACATTCTGTAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp TCAGTGTCTTTCATAGTCACTCAACTGGAGTCTTTTATAGTAAGGCTGCGAGGTGATGGCTGGGAAAGGTaGAAGAAAGAATGTATGCTC +
Preference number: 5 (lower is better)
Translates to: SVSFIVTQLESFIVRLRGDGWER*KKECML
Trigger: GAGCATACATTCTTTCTTCAACCTTTCCCAGCCATC...ACCTCGCAGCCTTACTATAAAAGACTCCAGTTGAGTGACTATGAAAGACACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS-3UTR CAA 90 bp TCAGTGTCTTTCATAGTCACTCAACTGGAGTCTTTTATAGTAAGGCTGCGAGGTTGGGTATGGAAGCTTTaGTTGGGAGTGCTGAAATAT +
Preference number: 5 (lower is better)
Translates to: SVSFIVTQLESFIVRLRGWVWKL*LGVLKY
Trigger: ATATTTCAGCACTCCCAACAAAAGCTTCCATACCCA...ACCTCGCAGCCTTACTATAAAAGACTCCAGTTGAGTGACTATGAAAGACACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp AGTTTTACAGAATGTAGGCTGACCTGGACAGAAAATCCTATGTGTTCATTCAGCATCTTCTCTTTGGCGTaGTTTACTTGTTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: SFTECRLTWTENPMCSFSIFSLA*FTCSCR
Trigger: CCTGCAGGAACAAGTAAACAACGCCAAAGAGAAGAT...GCTGAATGAACACATAGGATTTTCTGTCCAGGTCAGCCTACATTCTGTAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000495912.5
CDS-3UTR CAA 90 bp TGTCTAGACCAGCTCTGTTGCTTTTCACACCAGCGTGGGTTTCAAGTCATCTTTGATCAGAAAAGTCTTTaGAGTCAGATATCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: CLDQLCCFSHQRGFQVIFDQKSL*SQISSP
Trigger: AGGAGAAGATATCTGACTCAAAAGACTTTTCTGATC...AAAGATGACTTGAAACCCACGCTGGTGTGAAAAGCAACAGAGCTGGTCTAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS GCA 72 bp GTCGGACCGCCGAGAAGCGCCAAGCCCGCTGCTATGTaGAGGACGCCCACGGTCCCCCGGCGTCTCGCGCGT +
Preference number: 6 (lower is better)
Translates to: VGPPRSAKPAAM*RTPTVPRRLAR
Trigger: ACGCGCGAGACGCCGGGGGACCGTGGGCGTCCTGCACATAGCAGCGGGCTTGGCGCTTCTCGGCGGTCCGAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS GCA 72 bp CATCAGCGTCGGACCGCCGAGAAGCGCCAAGCCCGCTaGTATGTGCAGGACGCCCACGGTCCCCCGGCGTCT +
Preference number: 6 (lower is better)
Translates to: HQRRTAEKRQAR*YVQDAHGPPAS
Trigger: AGACGCCGGGGGACCGTGGGCGTCCTGCACATAGCAGCGGGCTTGGCGCTTCTCGGCGGTCCGACGCTGATG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS CCA 72 bp GGAGAGGGCTGGAGCAGGGCTTCTCATGAGGCACCCTaGGACGGCTGTGGTAGGATGAGGGTACAGTGTGGG +
Preference number: 6 (lower is better)
Translates to: GEGWSRASHEAP*DGCGRMRVQCG
Trigger: CCCACACTGTACCCTCATCCTACCACAGCCGTCCCAGGGTGCCTCATGAGAAGCCCTGCTCCAGCCCTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481907.1
CDS TCA 72 bp GGAGGCACTGGATGGGATCAGTCAGCACCCACGTCATaGGCAGGATCACATCAGCCATCAACAGGGCTGCCA +
Preference number: 6 (lower is better)
Translates to: GGTGWDQSAPTS*AGSHQPSTGLP
Trigger: TGGCAGCCCTGTTGATGGCTGATGTGATCCTGCTCATGACGTGGGTGCTGACTGATCCCATCCAGTGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS GCA 72 bp GACCCTCCAAAGTCAGACATCCTTCAACTGGTCCCCTaGTGCGAGTGCATGCCATGTGAGTCAAGAGTGGAC +
Preference number: 6 (lower is better)
Translates to: DPPKSDILQLVP*CECMPCESRVD
Trigger: GTCCACTCTTGACTCACATGGCATGCACTCGCAGCAGGGGACCAGTTGAAGGATGTCTGACTTTGGAGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000481907.1
CDS CCA 72 bp AAACATCGGAATACCGGGAAGCACAGAAGTGGGTGCTaGTCGAAGTGCAGGACACGTCTTTCCCTGTCACCG +
Preference number: 6 (lower is better)
Translates to: KHRNTGKHRSGC*SKCRTRLSLSP
Trigger: CGGTGACAGGGAAAGACGTGTCCTGCACTTCGACCAGCACCCACTTCTGTGCTTCCCGGTATTCCGATGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464295.6
CDS GCA 72 bp CCTCCAAAGTCAGACATCCTTCAACTGGTCCCCTGCTaGGAGTGCATGCCATGTGAGTCAAGAGTGGACATC +
Preference number: 6 (lower is better)
Translates to: PPKSDILQLVPC*ECMPCESRVDI
Trigger: GATGTCCACTCTTGACTCACATGGCATGCACTCGCAGCAGGGGACCAGTTGAAGGATGTCTGACTTTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000481907.1
CDS CCA 72 bp AAACATCGGAATACCGGGAAGCACAGAAGTGGGTGCTaGTCGAAGTGCAGGACACGTCTTTCCCTGTCACAC +
Preference number: 6 (lower is better)
Translates to: KHRNTGKHRSGC*SKCRTRLSLSH
Trigger: GTGTGACAGGGAAAGACGTGTCCTGCACTTCGACCAGCACCCACTTCTGTGCTTCCCGGTATTCCGATGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461057.1
CDS CCA 72 bp CAACTGGTGACCCTCCAAAGTCAGACATCCTTCAACTaGTCCCCTGCTGCGAGTGCATGCCATGTGAGTCAA +
Preference number: 6 (lower is better)
Translates to: QLVTLQSQTSFN*SPAASACHVSQ
Trigger: TTGACTCACATGGCATGCACTCGCAGCAGGGGACCAGTTGAAGGATGTCTGACTTTGGAGGGTCACCAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000481907.1
CDS TCA 72 bp CACCATACAGCAGGAGCAGACCCTTGCATCCCCAAATaGGAGCAATCCAAACATCGGAATACCGGGAAGCAC +
Preference number: 6 (lower is better)
Translates to: HHTAGADPCIPK*EQSKHRNTGKH
Trigger: GTGCTTCCCGGTATTCCGATGTTTGGATTGCTCTCATTTGGGGATGCAAGGGTCTGCTCCTGCTGTATGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS TCA 72 bp CAAAGACCAGGTTGGGCCAGGAATGCAAGTATCTGGTaGCTACAAAAAGCAGCCCAGCAGCCAGTACAAGGA +
Preference number: 6 (lower is better)
Translates to: QRPGWARNASIW*LQKAAQQPVQG
Trigger: TCCTTGTACTGGCTGCTGGGCTGCTTTTTGTAGTCACCAGATACTTGCATTCCTGGCCCAACCTGGTCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS GCA 72 bp AAGTCAGACATCCTTCAACTGGTCCCCTGCTGCGAGTaGATGCCATGTGAGTCAAGAGTGGACATCTTAGTA +
Preference number: 6 (lower is better)
Translates to: KSDILQLVPCCE*MPCESRVDILV
Trigger: TACTAAGATGTCCACTCTTGACTCACATGGCATGCACTCGCAGCAGGGGACCAGTTGAAGGATGTCTGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000481907.1
CDS GCA 72 bp CTAGCAAATAGCCAGGTAGCAGTGCTTCACTGCTTTTaGAGAAACCCTAACTCACCCAGACTGGTTCTGCTG +
Preference number: 6 (lower is better)
Translates to: LANSQVAVLHCF*RNPNSPRLVLL
Trigger: CAGCAGAACCAGTCTGGGTGAGTTAGGGTTTCTGCAAAAGCAGTGAAGCACTGCTACCTGGCTATTTGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481907.1
CDS CAA 72 bp CAGGTCTTTGATAATCACTCTCTTGTCCGGGACCCTTaGGGTAAACACCTTGTAGAGTCGCCAGCTCTTTCC +
Preference number: 6 (lower is better)
Translates to: QVFDNHSLVRDP*GKHLVESPALS
Trigger: GGAAAGAGCTGGCGACTCTACAAGGTGTTTACCCAAAGGGTCCCGGACAAGAGAGTGATTATCAAAGACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS CCA 72 bp GTTTATTTCAGGCTCCATGTCACCACATGCCCCTGTTaGTGTGTGCTTATTCACAGTCTTGGTTACCCACTG +
Preference number: 6 (lower is better)
Translates to: VYFRLHVTTCPC*CVLIHSLGYPL
Trigger: CAGTGGGTAACCAAGACTGTGAATAAGCACACACCAACAGGGGCATGTGGTGACATGGAGCCTGAAATAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000481907.1
CDS CAA 90 bp GTTGTACAAACAAAGATCCCTCCAGATGTGAGTCCAAAGACCAGGTaGGGCCAGGAATGCAAGTATCTGGTGACTACAAAAAGCAGCCCA +
Preference number: 6 (lower is better)
Translates to: VVQTKIPPDVSPKTR*GQECKYLVTTKSSP
Trigger: TGGGCTGCTTTTTGTAGTCACCAGATACTTGCATTCCTGGCCCAACCTGGTCTTTGGACTCACATCTGGAGGGATCTTTGTTTGTACAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS CAA 90 bp CTAAGACACAAGAGCAACTCAAATCTTTTCTTCAGAGGCCCCATTTaGGAGCTGGCTGCAGGCTCAGAATCCAGAGTGAACAACCCATTC +
Preference number: 6 (lower is better)
Translates to: LRHKSNSNLFFRGPI*ELAAGSESRVNNPF
Trigger: GAATGGGTTGTTCACTCTGGATTCTGAGCCTGCAGCCAGCTCCAAAATGGGGCCTCTGAAGAAAAGATTTGAGTTGCTCTTGTGTCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000481907.1
CDS CAA 90 bp ATTCAGAGCAGTTTATTTCAGGCTCCATGTCACCACATGCCCCTGTaGGTGTGTGCTTATTCACAGTCTTGGTTACCCACTGGTAGGGAT +
Preference number: 6 (lower is better)
Translates to: IQSSLFQAPCHHMPL*VCAYSQSWLPTGRD
Trigger: ATCCCTACCAGTGGGTAACCAAGACTGTGAATAAGCACACACCAACAGGGGCATGTGGTGACATGGAGCCTGAAATAAACTGCTCTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000481907.1
CDS GCA 72 bp TTCAGAGCAGTTTATTTCAGGCTCCATGTCACCACATaGCCCTGTTGGTGTGTGCTTATTCACAGTCTTGGT +
Preference number: 6 (lower is better)
Translates to: FRAVYFRLHVTT*PCWCVLIHSLG
Trigger: ACCAAGACTGTGAATAAGCACACACCAACAGGGGCATGTGGTGACATGGAGCCTGAAATAAACTGCTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000481907.1
CDS CAA 72 bp ACAAAGATCCCTCCAGATGTGAGTCCAAAGACCAGGTaGGGCCAGGAATGCAAGTATCTGGTGACTACAAAA +
Preference number: 6 (lower is better)
Translates to: TKIPPDVSPKTR*GQECKYLVTTK
Trigger: TTTTGTAGTCACCAGATACTTGCATTCCTGGCCCAACCTGGTCTTTGGACTCACATCTGGAGGGATCTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS CAA 72 bp AGTTTATTTCAGGCTCCATGTCACCACATGCCCCTGTaGGTGTGTGCTTATTCACAGTCTTGGTTACCCACT +
Preference number: 6 (lower is better)
Translates to: SLFQAPCHHMPL*VCAYSQSWLPT
Trigger: AGTGGGTAACCAAGACTGTGAATAAGCACACACCAACAGGGGCATGTGGTGACATGGAGCCTGAAATAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000481907.1
CDS TCA 72 bp CATCCTGAATCCCAAAGAGGTAAGCGCTACTGTAAGTaGGACAACTGCCCAGTAAGGTCACAATGTTCAGAT +
Preference number: 6 (lower is better)
Translates to: HPESQRGKRYCK*DNCPVRSQCSD
Trigger: ATCTGAACATTGTGACCTTACTGGGCAGTTGTCTCACTTACAGTAGCGCTTACCTCTTTGGGATTCAGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS CCA 72 bp AACTGCCCAGTAAGGTCACAATGTTCAGATTGGGACTaGACATCTTCACAATCCTGTTCTTCCTGCAGTGAA +
Preference number: 6 (lower is better)
Translates to: NCPVRSQCSDWD*TSSQSCSSCSE
Trigger: TTCACTGCAGGAAGAACAGGATTGTGAAGATGTCCAGTCCCAATCTGAACATTGTGACCTTACTGGGCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461057.1
ENST00000464295.6
CDS CAA 90 bp GCTTTTGTTGGGAGTGCTGAAATATTTGGCCATGCGTCTGATTGTTaGGTTTTCCTCTTCAAATGCCTTCCATTGCTTCAGCTGTTCTTC +
Preference number: 6 (lower is better)
Translates to: AFVGSAEIFGHASDC*VFLFKCLPLLQLFF
Trigger: GAAGAACAGCTGAAGCAATGGAAGGCATTTGAAGAGGAAAACCAAACAATCAGACGCATGGCCAAATATTTCAGCACTCCCAACAAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495912.5
CDS CAA 72 bp ACCTCCATTATAGAGAGAGACTCTTCATTCTCTTCTTaGGATACCCTTGCAGTAGTTAGCACAATACCGACC +
Preference number: 6 (lower is better)
Translates to: TSIIERDSSFSS*DTLAVVSTIPT
Trigger: GGTCGGTATTGTGCTAACTACTGCAAGGGTATCCAAAGAAGAGAATGAAGAGTCTCTCTCTATAATGGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481907.1
CDS TCA 72 bp CAGTCTTGGTTACCCACTGGTAGGGATGTAGATCTTTaGCTAAGACACAAGAGCAACTCAAATCTTTTCTTC +
Preference number: 6 (lower is better)
Translates to: QSWLPTGRDVDL*LRHKSNSNLFF
Trigger: GAAGAAAAGATTTGAGTTGCTCTTGTGTCTTAGTCAAAGATCTACATCCCTACCAGTGGGTAACCAAGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464295.6
ENST00000481907.1