RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPR155 (Homo sapiens)

Ensembl gene IDs: ENSG00000163328

Ensembl transcript IDs: ENST00000295500.8, ENST00000392551.6, ENST00000392552.7, ENST00000497620.1, ENST00000614352.4

Found 441 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATAAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTaGAACCAATCCCCTTGGATACTAAAGGATGACTATATTATATTC +
Preference number: 1 (lower is better)
Translates to: IRDLSILRFWDLQES*NQSPWILKDDYIIF
Trigger: GAATATAATATAGTCATCCTTTAGTATCCAAGGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
3UTR-3UTR TCA 90 bp GACCAGTTCTTCCCATCTACCATGTGGGGACACAGCAAGAAGGTACCATCTATGCTCGAACTCCTGGGCTaGAGCAATTCACCTGCCTCG +
Preference number: 2 (lower is better)
Translates to: DQFFPSTMWGHSKKVPSMLELLG*SNSPAS
Trigger: CGAGGCAGGTGAATTGCTTCAGCCCAGGAGTTCGAG...CATAGATGGTACCTTCTTGCTGTGTCCCCACATGGTAGATGGGAAGAACTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
3UTR-3UTR GCA 90 bp GACCAGTTCTTCCCATCTACCATGTGGGGACACAGCAAGAAGGTACCATCTATGCTGAAGCAATTCACCTaGCTCGGCCTCCCAAAGTGC +
Preference number: 2 (lower is better)
Translates to: DQFFPSTMWGHSKKVPSMLKQFT*LGLPKC
Trigger: GCACTTTGGGAGGCCGAGGCAGGTGAATTGCTTCAG...CATAGATGGTACCTTCTTGCTGTGTCCCCACATGGTAGATGGGAAGAACTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
3UTR-3UTR TCA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTATACGCGGCTAGAATATaGTTCCATGTAGGGTTCTCC +
Preference number: 2 (lower is better)
Translates to: QLRLREVASVNLPKVTQLYAARI*FHVGFS
Trigger: GGAGAACCCTACATGGAATCATATTCTAGCCGCGTA...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
3UTR-3UTR TCA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCTACGCGGCTAGAATATaGTTCCATGTAGGGTTCTCC +
Preference number: 2 (lower is better)
Translates to: KRQLRLREVASVNLPKVTYAARI*FHVGFS
Trigger: GGAGAACCCTACATGGAATCATATTCTAGCCGCGTA...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
3UTR-3UTR TCA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCTACAGAAGAGACAACTaGGGCTCAGAGAGGTTGCCT +
Preference number: 2 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPYRRDN*GSERLP
Trigger: AGGCAACCTCTCTGAGCCTCAGTTGTCTCTTCTGTA...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
3UTR-3UTR TCA 90 bp GACCAGTTCTTCCCATCTACCATGTGGGGACACAGCAAGAAGGTACCATCTATGTACAGAAGAGACAACTaGGGCTCAGAGAGGTTGCCT +
Preference number: 2 (lower is better)
Translates to: DQFFPSTMWGHSKKVPSMYRRDN*GSERLP
Trigger: AGGCAACCTCTCTGAGCCTCAGTTGTCTCTTCTGTA...CATAGATGGTACCTTCTTGCTGTGTCCCCACATGGTAGATGGGAAGAACTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
3UTR-3UTR GCA 90 bp GACCAGTTCTTCCCATCTACCATGTGGGGACACAGCAAGAAGGTACCATCTATGTTCAAGCAATTTTCCTaGCTCAGCCTCCTGGGTAGC +
Preference number: 2 (lower is better)
Translates to: DQFFPSTMWGHSKKVPSMFKQFS*LSLLGS
Trigger: GCTACCCAGGAGGCTGAGGCAGGAAAATTGCTTGAA...CATAGATGGTACCTTCTTGCTGTGTCCCCACATGGTAGATGGGAAGAACTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
3UTR-3UTR TCA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCTACGCGGCTAGAATATaGTTCCATGTAGGGTTCTCC +
Preference number: 2 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPYAARI*FHVGFS
Trigger: GGAGAACCCTACATGGAATCATATTCTAGCCGCGTA...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
3UTR-3UTR GCA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTAGGCGTGAGCCACCATaGCCGGCCTACACCATTTTA +
Preference number: 2 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVRREPP*PAYTIL
Trigger: TAAAATGGTGTAGGCCGGGCATGGTGGCTCACGCCT...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
3UTR CAA 90 bp CCGGCCTACACCATTTTATATAAGGGACTTGAGTATCCTCAGATTTaGGGATCTTCAGGAGTCCTGGAACCAATCCCCTTGGATACTAAA +
Preference number: 2 (lower is better)
Translates to: PAYTILYKGLEYPQI*GSSGVLEPIPLDTK
Trigger: TTTAGTATCCAAGGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTTATATAAAATGGTGTAGGCCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
3UTR-3UTR GCA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTAGGCGTGAGCCACCATaGCCGGCCTACACCATTTTA +
Preference number: 2 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLRREPP*PAYTIL
Trigger: TAAAATGGTGTAGGCCGGGCATGGTGGCTCACGCCT...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
3UTR-3UTR GCA 90 bp TTTTCACAGGAGAATAGAAGCTCCATGAGGATAGGAATCATATTTGTTCCAACTAGGCGTGAGCCACCATaGCCGGCCTACACCATTTTA +
Preference number: 2 (lower is better)
Translates to: FSQENRSSMRIGIIFVPTRREPP*PAYTIL
Trigger: TAAAATGGTGTAGGCCGGGCATGGTGGCTCACGCCT...AGTTGGAACAAATATGATTCCTATCCTCATGGAGCTTCTATTCTCCTGTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
3UTR-3UTR GCA 90 bp TTTTCACAGGAGAATAGAAGCTCCATGAGGATAGGAATCATATTTGTTCCAACTTTCAAGCAATTTTCCTaGCTCAGCCTCCTGGGTAGC +
Preference number: 2 (lower is better)
Translates to: FSQENRSSMRIGIIFVPTFKQFS*LSLLGS
Trigger: GCTACCCAGGAGGCTGAGGCAGGAAAATTGCTTGAA...AGTTGGAACAAATATGATTCCTATCCTCATGGAGCTTCTATTCTCCTGTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
3UTR-3UTR CCA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTAGTCTCCAAAGTAGCTaGGACTACAGGCATGCACTA +
Preference number: 2 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLSLQSS*DYRHAL
Trigger: TAGTGCATGCCTGTAGTCCCAGCTACTTTGGAGACT...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
3UTR-3UTR GCA 90 bp TTTTCACAGGAGAATAGAAGCTCCATGAGGATAGGAATCATATTTGTTCCAACTATCAGATTGTACTTCTaGAGGACTGTGGAGATAATA +
Preference number: 2 (lower is better)
Translates to: FSQENRSSMRIGIIFVPTIRLYF*RTVEII
Trigger: TATTATCTCCACAGTCCTGCAGAAGTACAATCTGAT...AGTTGGAACAAATATGATTCCTATCCTCATGGAGCTTCTATTCTCCTGTGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
3UTR-3UTR CAA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGGTTGCCTCTGTTAACTaGCCCAAGGTCACCCAGCTA +
Preference number: 3 (lower is better)
Translates to: PCACGGSTSFHILQKRQLVASVN*PKVTQL
Trigger: TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAAC...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
3UTR-3UTR CAA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTCCGGGTTTCACCACGTaGCCCGGGCTGGTCTTGAAC +
Preference number: 3 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLPGFTT*PGLVLN
Trigger: GTTCAAGACCAGCCCGGGCAACGTGGTGAAACCCGG...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
3UTR TCA 72 bp CTACCATGTGGGGACACAGCAAGAAGGTACCATCTATaGGCCAGAAATTTGCCTTACCAGACACTAGATCTG +
Preference number: 3 (lower is better)
Translates to: LPCGDTARRYHL*ARNLPYQTLDL
Trigger: CAGATCTAGTGTCTGGTAAGGCAAATTTCTGGCTCATAGATGGTACCTTCTTGCTGTGTCCCCACATGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
3UTR-3UTR CAA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTGTTGCCTCTGTTAACTaGCCCAAGGTCACCCAGCTA +
Preference number: 3 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVVASVN*PKVTQL
Trigger: TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAAC...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
3UTR-3UTR CAA 90 bp GACCAGTTCTTCCCATCTACCATGTGGGGACACAGCAAGAAGGTACCATCTATGAAGTTAAAGATCAGATaGTACTTCTGCAGGACTGTG +
Preference number: 3 (lower is better)
Translates to: DQFFPSTMWGHSKKVPSMKLKIR*YFCRTV
Trigger: CACAGTCCTGCAGAAGTACAATCTGATCTTTAACTT...CATAGATGGTACCTTCTTGCTGTGTCCCCACATGGTAGATGGGAAGAACTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
3UTR TCA 72 bp GGAGCACATCTTTTCACATTTTACAGAAGAGACAACTaGGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCA +
Preference number: 3 (lower is better)
Translates to: GAHLFTFYRRDN*GSERLPLLTCP
Trigger: TGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
3UTR-3UTR CAA 90 bp GACCAGTTCTTCCCATCTACCATGTGGGGACACAGCAAGAAGGTACCATCTATGCTGCATTACGATGCTTaGTTCAAACACAGAAATGAT +
Preference number: 3 (lower is better)
Translates to: DQFFPSTMWGHSKKVPSMLHYDA*FKHRND
Trigger: ATCATTTCTGTGTTTGAACAAAGCATCGTAATGCAG...CATAGATGGTACCTTCTTGCTGTGTCCCCACATGGTAGATGGGAAGAACTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
3UTR-3UTR CAA 90 bp TTTTCACAGGAGAATAGAAGCTCCATGAGGATAGGAATCATATTTGTTCCAACTTGCAGTGATGTGATCTaGGTTCACTGCAACCTGCGC +
Preference number: 3 (lower is better)
Translates to: FSQENRSSMRIGIIFVPTCSDVI*VHCNLR
Trigger: GCGCAGGTTGCAGTGAACCAAGATCACATCACTGCA...AGTTGGAACAAATATGATTCCTATCCTCATGGAGCTTCTATTCTCCTGTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
3UTR-3UTR CAA 90 bp TTTTCACAGGAGAATAGAAGCTCCATGAGGATAGGAATCATATTTGTTCCAACTGAGTATCCTCAGATTTaGGGATCTTCAGGAGTCCTG +
Preference number: 3 (lower is better)
Translates to: FSQENRSSMRIGIIFVPTEYPQI*GSSGVL
Trigger: CAGGACTCCTGAAGATCCCAAAATCTGAGGATACTC...AGTTGGAACAAATATGATTCCTATCCTCATGGAGCTTCTATTCTCCTGTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTAGATCTCCTGACCTCGTaGTCCGCCAGCCTCGACCTC +
Preference number: 4 (lower is better)
Translates to: QLRLREVASVNLPKVTQLDLLTS*SASLDL
Trigger: GAGGTCGAGGCTGGCGGATCACGAGGTCAGGAGATC...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTAGTGGTCTCGATCTCCTaGCCTCGTGATCCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: QLRLREVASVNLPKVTQLVVSIS*PRDPPA
Trigger: GGCTGGCGGATCACGAGGTCAGGAGATCGAGACCAC...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTACGAGGAGAAGGGAGCTaGTGCTCGCAGGGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: QLRLREVASVNLPKVTQLRGEGS*CSQGAK
Trigger: CTTGGCACCCTGCGAGCACCAGCTCCCTTCTCCTCG...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTACTGGTGCTCGCAGGGTaGCAAGCAGGGAGAAGACCA +
Preference number: 4 (lower is better)
Translates to: QLRLREVASVNLPKVTQLLVLAG*QAGRRP
Trigger: TGGTCTTCTCCCTGCTTGGCACCCTGCGAGCACCAG...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTACGCCTTCCGGGTTCATaGCATTCTCCTGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: QLRLREVASVNLPKVTQLRLPGS*HSPASA
Trigger: GGCTGAGGCAGGAGAATGGCATGAACCCGGAAGGCG...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCGAGGAGAAGGGAGCTaGTGCTCGCAGGGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: KRQLRLREVASVNLPKVTRGEGS*CSQGAK
Trigger: CTTGGCACCCTGCGAGCACCAGCTCCCTTCTCCTCG...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGCCGAGCGCAACCGGGTaGCAGCTGCAGCAGCTTAGG +
Preference number: 4 (lower is better)
Translates to: PCACGGSTSFHILQKRQLPSATG*QLQQLR
Trigger: CCTAAGCTGCTGCAGCTGGCACCCGGTTGCGCTCGG...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCTGGTGCTCGCAGGGTaGCAAGCAGGGAGAAGACCA +
Preference number: 4 (lower is better)
Translates to: KRQLRLREVASVNLPKVTLVLAG*QAGRRP
Trigger: TGGTCTTCTCCCTGCTTGGCACCCTGCGAGCACCAG...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCGCCTTCCGGGTTCATaGCATTCTCCTGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: KRQLRLREVASVNLPKVTRLPGS*HSPASA
Trigger: GGCTGAGGCAGGAGAATGGCATGAACCCGGAAGGCG...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp GACCAGTTCTTCCCATCTACCATGTGGGGACACAGCAAGAAGGTACCATCTATGCGAGGAGAAGGGAGCTaGTGCTCGCAGGGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: DQFFPSTMWGHSKKVPSMRGEGS*CSQGAK
Trigger: CTTGGCACCCTGCGAGCACCAGCTCCCTTCTCCTCG...CATAGATGGTACCTTCTTGCTGTGTCCCCACATGGTAGATGGGAAGAACTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCGCAGTGGCGCGATCTTaGTTCACTGCAAGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: KRQLRLREVASVNLPKVTAVARS*FTASSA
Trigger: GGCGGAGCTTGCAGTGAACCAAGATCGCGCCACTGC...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCTCGAACTCCTGGGCTaGAGCAATTCACCTGCCTCG +
Preference number: 4 (lower is better)
Translates to: KRQLRLREVASVNLPKVTLELLG*SNSPAS
Trigger: CGAGGCAGGTGAATTGCTTCAGCCCAGGAGTTCGAG...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTAAGTACCTGCTTCGTCTaGAACCTTGGAGTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: QLRLREVASVNLPKVTQLSTCFV*NLGVAR
Trigger: CCTCGCCACTCCAAGGTTGCAGACGAAGCAGGTACT...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295500.8
CDS-3UTR CCA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTAAGCCTCCTGGGTAGCTaGGATTACAGGTGCACACCA +
Preference number: 4 (lower is better)
Translates to: QLRLREVASVNLPKVTQLSLLGS*DYRCTP
Trigger: TGGTGTGCACCTGTAATCCCAGCTACCCAGGAGGCT...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCGTGGTCTCGATCTCCTaGCCTCGTGATCCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: KGLEYPQILGSSGVLEPIVVSIS*PRDPPA
Trigger: GGCTGGCGGATCACGAGGTCAGGAGATCGAGACCAC...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGCAACCGGGTGCCAGCTaGAGCAGCTTAGGCACGTTC +
Preference number: 4 (lower is better)
Translates to: PCACGGSTSFHILQKRQLQPGAS*SSLGTF
Trigger: GAACGTGCCTAAGCTGCTGCAGCTGGCACCCGGTTG...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGCTGGTGCTCGCAGGGTaGCAAGCAGGGAGAAGACCA +
Preference number: 4 (lower is better)
Translates to: PCACGGSTSFHILQKRQLLVLAG*QAGRRP
Trigger: TGGTCTTCTCCCTGCTTGGCACCCTGCGAGCACCAG...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCTGAAGCAATTCACCTaGCTCGGCCTCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: KRQLRLREVASVNLPKVTLKQFT*LGLPKC
Trigger: GCACTTTGGGAGGCCGAGGCAGGTGAATTGCTTCAG...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCGCGATCTTGGTTCACTaGAAGCTCCGCCTTCCGGGT +
Preference number: 4 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPAILVH*KLRLPG
Trigger: ACCCGGAAGGCGGAGCTTGCAGTGAACCAAGATCGC...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCGAGGAGAAGGGAGCTaGTGCTCGCAGGGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: KGLEYPQILGSSGVLEPIRGEGS*CSQGAK
Trigger: CTTGGCACCCTGCGAGCACCAGCTCCCTTCTCCTCG...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTACCTGCTTGGGCAGTCTaGTTCATGCACATGAGGGAT +
Preference number: 4 (lower is better)
Translates to: QLRLREVASVNLPKVTQLPAWAV*FMHMRD
Trigger: ATCCCTCATGTGCATGAACCAGACTGCCCAAGCAGG...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTATACAGAAGAGACAACTaGGGCTCAGAGAGGTTGCCT +
Preference number: 4 (lower is better)
Translates to: QLRLREVASVNLPKVTQLYRRDN*GSERLP
Trigger: AGGCAACCTCTCTGAGCCTCAGTTGTCTCTTCTGTA...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGAGATCTCCTGACCTCGTaGTCCGCCAGCCTCGACCTC +
Preference number: 4 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARDLLTS*SASLDL
Trigger: GAGGTCGAGGCTGGCGGATCACGAGGTCAGGAGATC...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCTGGTGCTCGCAGGGTaGCAAGCAGGGAGAAGACCA +
Preference number: 4 (lower is better)
Translates to: KGLEYPQILGSSGVLEPILVLAG*QAGRRP
Trigger: TGGTCTTCTCCCTGCTTGGCACCCTGCGAGCACCAG...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTAGTTCCACCATTTCTCTaGACAGAAGTGGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: QLRLREVASVNLPKVTQLVPPFL*TEVAAP
Trigger: TGGTGCTGCCACTTCTGTGCAGAGAAATGGTGGAAC...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTACTTCCTGGGCTAATATaGAGCTCTGGGAGTTACAGC +
Preference number: 4 (lower is better)
Translates to: QLRLREVASVNLPKVTQLLPGLI*SSGSYS
Trigger: GCTGTAACTCCCAGAGCTGCATATTAGCCCAGGAAG...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCAGGCGTGAGCCACCATaGCCGGCCTACACCATTTTA +
Preference number: 4 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPRREPP*PAYTIL
Trigger: TAAAATGGTGTAGGCCGGGCATGGTGGCTCACGCCT...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp GACCAGTTCTTCCCATCTACCATGTGGGGACACAGCAAGAAGGTACCATCTATGAGGCGTGAGCCACCATaGCCGGCCTACACCATTTTA +
Preference number: 4 (lower is better)
Translates to: DQFFPSTMWGHSKKVPSMRREPP*PAYTIL
Trigger: TAAAATGGTGTAGGCCGGGCATGGTGGCTCACGCCT...CATAGATGGTACCTTCTTGCTGTGTCCCCACATGGTAGATGGGAAGAACTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp GACCAGTTCTTCCCATCTACCATGTGGGGACACAGCAAGAAGGTACCATCTATGGATCTCTGCTTCGTCTaGAACCTTGGAGTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: DQFFPSTMWGHSKKVPSMDLCFV*NLGVAR
Trigger: CCTCGCCACTCCAAGGTTGCAGACGAAGCAGAGATC...CATAGATGGTACCTTCTTGCTGTGTCCCCACATGGTAGATGGGAAGAACTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCACGATCTCAGCTCACTaGAACCTCTGCCTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: KRQLRLREVASVNLPKVTTISAH*NLCLLV
Trigger: AACCAGGAGGCAGAGGTTGCAGTGAGCTGAGATCGT...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCTCGCCCAGGCTGGAGTaGAGTGGCGCGATCTTGGTT +
Preference number: 4 (lower is better)
Translates to: KGLEYPQILGSSGVLEPISPRLE*SGAILV
Trigger: AACCAAGATCGCGCCACTGCACTCCAGCCTGGGCGA...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCTCCGATAAAGTAAGGTaGGGTAAGCCGATGCGGCCC +
Preference number: 4 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPSDKVR*GKPMRP
Trigger: GGGCCGCATCGGCTTACCCCACCTTACTTTATCGGA...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392551.6
ENST00000614352.4
CDS-3UTR CCA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCTGGTCTCGAACTCCTaGGCTGAAGCAATTCACCTG +
Preference number: 4 (lower is better)
Translates to: KRQLRLREVASVNLPKVTLVSNS*AEAIHL
Trigger: CAGGTGAATTGCTTCAGCCCAGGAGTTCGAGACCAG...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTAAGGCAGAAACGTACATaGTGGGAGCAGACACAAATG +
Preference number: 4 (lower is better)
Translates to: QLRLREVASVNLPKVTQLRQKRT*WEQTQM
Trigger: CATTTGTGTCTGCTCCCATCATGTACGTTTCTGCCT...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGACAACCGGGTGCCAGCTaGAGCAGCTTAGGCACGTTC +
Preference number: 4 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARQPGAS*SSLGTF
Trigger: GAACGTGCCTAAGCTGCTGCAGCTGGCACCCGGTTG...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGAGGCGTGAGCCACCATaGCCGGCCTACACCATTTTA +
Preference number: 4 (lower is better)
Translates to: PCACGGSTSFHILQKRQLRREPP*PAYTIL
Trigger: TAAAATGGTGTAGGCCGGGCATGGTGGCTCACGCCT...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCTTCAAGCAATTTTCCTaGCTCAGCCTCCTGGGTAGC +
Preference number: 4 (lower is better)
Translates to: KRQLRLREVASVNLPKVTFKQFS*LSLLGS
Trigger: GCTACCCAGGAGGCTGAGGCAGGAAAATTGCTTGAA...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGATCGCCCAGGCTGGAGTaGAGTGGCGCGATCTTGGTT +
Preference number: 4 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARSPRLE*SGAILV
Trigger: AACCAAGATCGCGCCACTGCACTCCAGCCTGGGCGA...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCGATGGCATATGCCAATaGCTTAGGGTCCATAGTGGG +
Preference number: 4 (lower is better)
Translates to: KRQLRLREVASVNLPKVTDGICQ*LRVHSG
Trigger: CCCACTATGGACCCTAAGCCATTGGCATATGCCATC...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCCCTGCTTGGGCAGTCTaGTTCATGCACATGAGGGAT +
Preference number: 4 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPPAWAV*FMHMRD
Trigger: ATCCCTCATGTGCATGAACCAGACTGCCCAAGCAGG...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCCTGGTCTCGAACTCCTaGGCTGAAGCAATTCACCTG +
Preference number: 4 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPLVSNS*AEAIHL
Trigger: CAGGTGAATTGCTTCAGCCCAGGAGTTCGAGACCAG...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGATGAACCACCGCGCCTaGCCCCCATGCAGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: PCACGGSTSFHILQKRQLMNHRA*PPCRFL
Trigger: TAAAAACCTGCATGGGGGCCAGGCGCGGTGGTTCAT...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTATTCCAGGCTCTTGGTTaGATAGCCACCATAAACAAC +
Preference number: 4 (lower is better)
Translates to: QLRLREVASVNLPKVTQLFQALG*IATINN
Trigger: GTTGTTTATGGTGGCTATTCAACCAAGAGCCTGGAA...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGACTCGAACTCCTGGGCTaGAGCAATTCACCTGCCTCG +
Preference number: 4 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARLELLG*SNSPAS
Trigger: CGAGGCAGGTGAATTGCTTCAGCCCAGGAGTTCGAG...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCTCCAGCCATCACTCATaGCAGGACTACCTATGTGCA +
Preference number: 4 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPSSHHS*QDYLCA
Trigger: TGCACATAGGTAGTCCTGTCATGAGTGATGGCTGGA...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCGACATTGGCCCTTCCTaGTATGTAGCCACAAAGGAC +
Preference number: 4 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPDIGPS*YVATKD
Trigger: GTCCTTTGTGGCTACATAGCAGGAAGGGCCAATGTC...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTAGATAGCCACTCCTGGTaGTACAGGAAATACACCATA +
Preference number: 4 (lower is better)
Translates to: QLRLREVASVNLPKVTQLDSHSW*YRKYTI
Trigger: TATGGTGTATTTCCTGTAGCACCAGGAGTGGCTATC...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCGAGCAGACACAAATGTaGTTATCACCATCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: KRQLRLREVASVNLPKVTEQTQM*LSPSLR
Trigger: CCTCAGGGATGGTGATAAGCACATTTGTGTCTGCTC...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTAATTCTGGATGGCATATaGCAATGGCTTAGGGTCCAT +
Preference number: 4 (lower is better)
Translates to: QLRLREVASVNLPKVTQLILDGI*QWLRVH
Trigger: ATGGACCCTAAGCCATTGGCATATGCCATCCAGAAT...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCCTGTCCACAGGTAGGTaGTATAGAGGGAGCTGTACA +
Preference number: 4 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPLSTGR*YRGSCT
Trigger: TGTACAGCTCCCTCTATAGCACCTACCTGTGGACAG...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCACCTTCATAGCTTCCTaGTTGGGCAGTCTGGTTCAT +
Preference number: 4 (lower is better)
Translates to: KRQLRLREVASVNLPKVTTFIAS*LGSLVH
Trigger: ATGAACCAGACTGCCCAAGCAGGAAGCTATGAAGGT...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTATGGTTCATTTACTGGTaGTGGACTCTCCTCAAAAGC +
Preference number: 4 (lower is better)
Translates to: QLRLREVASVNLPKVTQLWFIYW*WTLLKS
Trigger: GCTTTTGAGGAGAGTCCAGCACCAGTAAATGAACCA...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCCTTCCTGGGCTAATATaGAGCTCTGGGAGTTACAGC +
Preference number: 4 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPLPGLI*SSGSYS
Trigger: GCTGTAACTCCCAGAGCTGCATATTAGCCCAGGAAG...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTATCACCCAGGTTGAAGTaGAGTGATGTGATCTTGGTT +
Preference number: 4 (lower is better)
Translates to: QLRLREVASVNLPKVTQLSPRLK*SDVILV
Trigger: AACCAAGATCACATCACTGCACTTCAACCTGGGTGA...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCTGAAGCAATTCACCTaGCTCGGCCTCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: KGLEYPQILGSSGVLEPILKQFT*LGLPKC
Trigger: GCACTTTGGGAGGCCGAGGCAGGTGAATTGCTTCAG...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGACGATCTCAGCTCACTaGAACCTCTGCCTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: PCACGGSTSFHILQKRQLTISAH*NLCLLV
Trigger: AACCAGGAGGCAGAGGTTGCAGTGAGCTGAGATCGT...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGATCTGCAACCTTGGAGTaGCGAGGAGAAGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARSATLE*RGEGSW
Trigger: CCAGCTCCCTTCTCCTCGCCACTCCAAGGTTGCAGA...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTACCCGCCACACACACTaGCCCCAGGGACTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVTRHTH*PQGLCA
Trigger: GGCACAAAGTCCCTGGGGCCAGTGTGTGTGGCGGGT...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295500.8
CDS-3UTR CCA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGCCTGCTTGGGCAGTCTaGTTCATGCACATGAGGGAT +
Preference number: 4 (lower is better)
Translates to: PCACGGSTSFHILQKRQLPAWAV*FMHMRD
Trigger: ATCCCTCATGTGCATGAACCAGACTGCCCAAGCAGG...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCATTCACCATTTCCCATaGAGCAGGAGCAGCAACTTG +
Preference number: 4 (lower is better)
Translates to: KRQLRLREVASVNLPKVTIHHFP*SRSSNL
Trigger: CAAGTTGCTGCTCCTGCTCCATGGGAAATGGTGAAT...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCGCTAATATGCAGCTCTaGGAGTTACAGCGACTCACA +
Preference number: 4 (lower is better)
Translates to: KRQLRLREVASVNLPKVTANMQL*ELQRLT
Trigger: TGTGAGTCGCTGTAACTCCCAGAGCTGCATATTAGC...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTATCGTTGGTAATATGTTaGATGACTCCCCCTTGTACC +
Preference number: 4 (lower is better)
Translates to: QLRLREVASVNLPKVTQLSLVIC*MTPPCT
Trigger: GGTACAAGGGGGAGTCATCCAACATATTACCAACGA...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCAGTCTCCAAAGTAGCTaGGACTACAGGCATGCACTA +
Preference number: 4 (lower is better)
Translates to: KRQLRLREVASVNLPKVTSLQSS*DYRHAL
Trigger: TAGTGCATGCCTGTAGTCCCAGCTACTTTGGAGACT...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCAGCCTCCTGGGTAGCTaGGATTACAGGTGCACACCA +
Preference number: 4 (lower is better)
Translates to: KGLEYPQILGSSGVLEPISLLGS*DYRCTP
Trigger: TGGTGTGCACCTGTAATCCCAGCTACCCAGGAGGCT...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp GACCAGTTCTTCCCATCTACCATGTGGGGACACAGCAAGAAGGTACCATCTATGCAGAGCCCAGAGTCATaGAGAACAGAACTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: DQFFPSTMWGHSKKVPSMQSPES*RTELRK
Trigger: TTTCCTGAGTTCTGTTCTTCATGACTCTGGGCTCTG...CATAGATGGTACCTTCTTGCTGTGTCCCCACATGGTAGATGGGAAGAACTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTCAACCGGGTGCCAGCTaGAGCAGCTTAGGCACGTTC +
Preference number: 4 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVQPGAS*SSLGTF
Trigger: GAACGTGCCTAAGCTGCTGCAGCTGGCACCCGGTTG...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTACGGAAGCAGGGACTATaGATGTTTTTGCTCAATGTT +
Preference number: 4 (lower is better)
Translates to: QLRLREVASVNLPKVTQLRKQGL*MFLLNV
Trigger: AACATTGAGCAAAAACATGCATAGTCCCTGCTTCCG...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295500.8
CDS-3UTR GCA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTAAAATCCATGCGTTACTaGTGTAGGCAAAGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: QLRLREVASVNLPKVTQLKSMRY*CRQSLG
Trigger: ACCAAGACTTTGCCTACAGCAGTAACGCATGGATTT...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCAGCCACAAAGGACAATaGCAAAGCATTCCAGTAAGG +
Preference number: 4 (lower is better)
Translates to: KRQLRLREVASVNLPKVTSHKGQ*QSIPVR
Trigger: CCTTACTGGAATGCTTTGGCATTGTCCTTTGTGGCT...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGGACATTGGCCCTTCCTaGTATGTAGCCACAAAGGAC +
Preference number: 4 (lower is better)
Translates to: PCACGGSTSFHILQKRQLDIGPS*YVATKD
Trigger: GTCCTTTGTGGCTACATAGCAGGAAGGGCCAATGTC...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCATTCTGGATGGCATATaGCAATGGCTTAGGGTCCAT +
Preference number: 4 (lower is better)
Translates to: KRQLRLREVASVNLPKVTILDGI*QWLRVH
Trigger: ATGGACCCTAAGCCATTGGCATATGCCATCCAGAAT...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGGCAGAACAGGGTGACTaGTGTGGTGATCATCTGTTC +
Preference number: 4 (lower is better)
Translates to: PCACGGSTSFHILQKRQLAEQGD*CGDHLF
Trigger: GAACAGATGATCACCACAGCAGTCACCCTGTTCTGC...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCACCTTCATAGCTTCCTaGTTGGGCAGTCTGGTTCAT +
Preference number: 4 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPTFIAS*LGSLVH
Trigger: ATGAACCAGACTGCCCAAGCAGGAAGCTATGAAGGT...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp GACCAGTTCTTCCCATCTACCATGTGGGGACACAGCAAGAAGGTACCATCTATGACCTTCATAGCTTCCTaGTTGGGCAGTCTGGTTCAT +
Preference number: 4 (lower is better)
Translates to: DQFFPSTMWGHSKKVPSMTFIAS*LGSLVH
Trigger: ATGAACCAGACTGCCCAAGCAGGAAGCTATGAAGGT...CATAGATGGTACCTTCTTGCTGTGTCCCCACATGGTAGATGGGAAGAACTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCTCACAGGCTCACTGGTaGTTGTGTTTGCTATTGGCT +
Preference number: 4 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPSQAHW*LCLLLA
Trigger: AGCCAATAGCAAACACAAGCACCAGTGAGCCTGTGA...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGCTTCCTGGGCTAATATaGAGCTCTGGGAGTTACAGC +
Preference number: 4 (lower is better)
Translates to: PCACGGSTSFHILQKRQLLPGLI*SSGSYS
Trigger: GCTGTAACTCCCAGAGCTGCATATTAGCCCAGGAAG...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTATCCAGCAGAAGTCTTTaGACCACACCTTCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: QLRLREVASVNLPKVTQLSSRSL*TTPSFF
Trigger: AAAGAAAGAAGGTGTGGTGCAAAGACTTCTGCTGGA...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGACACATCTGCTTCGTCTaGAACCTTGGAGTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARHICFV*NLGVAR
Trigger: CCTCGCCACTCCAAGGTTGCAGACGAAGCAGATGTG...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392551.6
CDS-3UTR CCA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTATTTGATAAACTTGTATaGTTCACCACACTGTCGCCC +
Preference number: 4 (lower is better)
Translates to: QLRLREVASVNLPKVTQLFDKLV*FTTLSP
Trigger: GGGCGACAGTGTGGTGAACCATACAAGTTTATCAAA...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCAAAGATAGCCACTCCTaGTGCTACAGGAAATACACC +
Preference number: 4 (lower is better)
Translates to: KRQLRLREVASVNLPKVTKDSHS*CYRKYT
Trigger: GGTGTATTTCCTGTAGCACCAGGAGTGGCTATCTTT...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGGATGGCATATGCCAATaGCTTAGGGTCCATAGTGGG +
Preference number: 4 (lower is better)
Translates to: PCACGGSTSFHILQKRQLDGICQ*LRVHSG
Trigger: CCCACTATGGACCCTAAGCCATTGGCATATGCCATC...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTATTCTGGTTCATTTACTaGTGCTGGACTCTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: QLRLREVASVNLPKVTQLFWFIY*CWTLLK
Trigger: TTTGAGGAGAGTCCAGCACCAGTAAATGAACCAGAA...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCGAATCACAGGCTCACTaGTGCTTGTGTTTGCTATTG +
Preference number: 4 (lower is better)
Translates to: KRQLRLREVASVNLPKVTESQAH*CLCLLL
Trigger: CAATAGCAAACACAAGCACCAGTGAGCCTGTGATTC...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp GACCAGTTCTTCCCATCTACCATGTGGGGACACAGCAAGAAGGTACCATCTATGGCTAATATGCAGCTCTaGGAGTTACAGCGACTCACA +
Preference number: 4 (lower is better)
Translates to: DQFFPSTMWGHSKKVPSMANMQL*ELQRLT
Trigger: TGTGAGTCGCTGTAACTCCCAGAGCTGCATATTAGC...CATAGATGGTACCTTCTTGCTGTGTCCCCACATGGTAGATGGGAAGAACTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCTTCCCATCTACCATGTaGGGACACAGCAAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPFPSTM*GHSKKV
Trigger: TACCTTCTTGCTGTGTCCCCACATGGTAGATGGGAA...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCTTTTTCCCACCATCGTaGGACCAAGATAAAATAGGG +
Preference number: 4 (lower is better)
Translates to: KRQLRLREVASVNLPKVTFFPPS*DQDKIG
Trigger: CCCTATTTTATCTTGGTCTCACGATGGTGGGAAAAA...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGTCTGGTTCATGCACATaGGGGATATGCCAGCTATCA +
Preference number: 4 (lower is better)
Translates to: PCACGGSTSFHILQKRQLSGSCT*GICQLS
Trigger: TGATAGCTGGCATATCCCTCATGTGCATGAACCAGA...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp GACCAGTTCTTCCCATCTACCATGTGGGGACACAGCAAGAAGGTACCATCTATGAGCCACAAAGGACAATaGCAAAGCATTCCAGTAAGG +
Preference number: 4 (lower is better)
Translates to: DQFFPSTMWGHSKKVPSMSHKGQ*QSIPVR
Trigger: CCTTACTGGAATGCTTTGGCATTGTCCTTTGTGGCT...CATAGATGGTACCTTCTTGCTGTGTCCCCACATGGTAGATGGGAAGAACTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCGTTCCACCATTTCTCTaGACAGAAGTGGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: KGLEYPQILGSSGVLEPIVPPFL*TEVAAP
Trigger: TGGTGCTGCCACTTCTGTGCAGAGAAATGGTGGAAC...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCGATAGCCACTCCTGGTaGTACAGGAAATACACCATA +
Preference number: 4 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPDSHSW*YRKYTI
Trigger: TATGGTGTATTTCCTGTAGCACCAGGAGTGGCTATC...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGGAGCAGACACAAATGTaGTTATCACCATCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: PCACGGSTSFHILQKRQLEQTQM*LSPSLR
Trigger: CCTCAGGGATGGTGATAAGCACATTTGTGTCTGCTC...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCGCAGAACAGGGTGACTaGTGTGGTGATCATCTGTTC +
Preference number: 4 (lower is better)
Translates to: KGLEYPQILGSSGVLEPIAEQGD*CGDHLF
Trigger: GAACAGATGATCACCACAGCAGTCACCCTGTTCTGC...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCTTCCTGGGCTAATATaGAGCTCTGGGAGTTACAGC +
Preference number: 4 (lower is better)
Translates to: KGLEYPQILGSSGVLEPILPGLI*SSGSYS
Trigger: GCTGTAACTCCCAGAGCTGCATATTAGCCCAGGAAG...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCACATGTCGGGTCAGTTaGTGGTCTCCACTCTGTAGA +
Preference number: 4 (lower is better)
Translates to: KGLEYPQILGSSGVLEPITCRVS*WSPLCR
Trigger: TCTACAGAGTGGAGACCAGCAACTGACCCGACATGT...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCTCCAGCAGAAGTCTTTaGACCACACCTTCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: KRQLRLREVASVNLPKVTSSRSL*TTPSFF
Trigger: AAAGAAAGAAGGTGTGGTGCAAAGACTTCTGCTGGA...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCTGTTGGAGAGTGTTTaGATTAATAGCAGGAGGACT +
Preference number: 4 (lower is better)
Translates to: KRQLRLREVASVNLPKVTLLESV*INSRRT
Trigger: AGTCCTCCTGCTATTAATGCAAACACTCTCCAACAG...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCTCGACCTCCCAAAGTaGTGGGATTGCAGGTATGAA +
Preference number: 4 (lower is better)
Translates to: KGLEYPQILGSSGVLEPILDLPK*WDCRYE
Trigger: TTCATACCTGCAATCCCAGCACTTTGGGAGGTCGAG...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp GACCAGTTCTTCCCATCTACCATGTGGGGACACAGCAAGAAGGTACCATCTATGAAAGATAGCCACTCCTaGTGCTACAGGAAATACACC +
Preference number: 4 (lower is better)
Translates to: DQFFPSTMWGHSKKVPSMKDSHS*CYRKYT
Trigger: GGTGTATTTCCTGTAGCACCAGGAGTGGCTATCTTT...CATAGATGGTACCTTCTTGCTGTGTCCCCACATGGTAGATGGGAAGAACTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTATCAAAACTAACATTCTaGATGGCATATGCCAATGGC +
Preference number: 4 (lower is better)
Translates to: QLRLREVASVNLPKVTQLSKLTF*MAYANG
Trigger: GCCATTGGCATATGCCATCCAGAATGTTAGTTTTGA...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGATTCACCATTTCCCATaGAGCAGGAGCAGCAACTTG +
Preference number: 4 (lower is better)
Translates to: PCACGGSTSFHILQKRQLIHHFP*SRSSNL
Trigger: CAAGTTGCTGCTCCTGCTCCATGGGAAATGGTGAAT...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp GACCAGTTCTTCCCATCTACCATGTGGGGACACAGCAAGAAGGTACCATCTATGGAATCACAGGCTCACTaGTGCTTGTGTTTGCTATTG +
Preference number: 4 (lower is better)
Translates to: DQFFPSTMWGHSKKVPSMESQAH*CLCLLL
Trigger: CAATAGCAAACACAAGCACCAGTGAGCCTGTGATTC...CATAGATGGTACCTTCTTGCTGTGTCCCCACATGGTAGATGGGAAGAACTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGGCTAATATGCAGCTCTaGGAGTTACAGCGACTCACA +
Preference number: 4 (lower is better)
Translates to: PCACGGSTSFHILQKRQLANMQL*ELQRLT
Trigger: TGTGAGTCGCTGTAACTCCCAGAGCTGCATATTAGC...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp GACCAGTTCTTCCCATCTACCATGTGGGGACACAGCAAGAAGGTACCATCTATGTACTGTTCTTCTTCCTaGGCTAATATGCAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: DQFFPSTMWGHSKKVPSMYCSSS*ANMQLW
Trigger: CCAGAGCTGCATATTAGCCCAGGAAGAAGAACAGTA...CATAGATGGTACCTTCTTGCTGTGTCCCCACATGGTAGATGGGAAGAACTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCTACTGTTCTTCTTCCTaGGCTAATATGCAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPYCSSS*ANMQLW
Trigger: CCAGAGCTGCATATTAGCCCAGGAAGAAGAACAGTA...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCTGTCGGGTCAGTTGCTaGTCTCCACTCTGTAGATAC +
Preference number: 4 (lower is better)
Translates to: KGLEYPQILGSSGVLEPICRVSC*SPLCRY
Trigger: GTATCTACAGAGTGGAGACCAGCAACTGACCCGACA...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGACTGGTCTCGAACTCCTaGGCTGAAGCAATTCACCTG +
Preference number: 4 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARLVSNS*AEAIHL
Trigger: CAGGTGAATTGCTTCAGCCCAGGAGTTCGAGACCAG...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGTTCCCATCTACCATGTaGGGACACAGCAAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: PCACGGSTSFHILQKRQLFPSTM*GHSKKV
Trigger: TACCTTCTTGCTGTGTCCCCACATGGTAGATGGGAA...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTAAAGTCTTGGTCATATTaGCTGCAATGGTTAAGTTCT +
Preference number: 4 (lower is better)
Translates to: QLRLREVASVNLPKVTQLKSWSY*LQWLSS
Trigger: AGAACTTAACCATTGCAGTCAATATGACCAAGACTT...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTAGCACAGACAATAGACTaGGCAATGAGTAAATTAGTT +
Preference number: 4 (lower is better)
Translates to: QLRLREVASVNLPKVTQLAQTID*AMSKLV
Trigger: AACTAATTTACTCATTGCTCAGTCTATTGTCTGTGC...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
CDS-3UTR TCA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTACCCAGCCAGATATTATaGTTATTCCAACAGGAATTT +
Preference number: 4 (lower is better)
Translates to: QLRLREVASVNLPKVTQLPSQIL*LFQQEF
Trigger: AAATTCCTGTTGGAATAATCATAATATCTGGCTGGG...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCACACCTTCTTTCTTTaGCAATGTTTCGGATACAGA +
Preference number: 4 (lower is better)
Translates to: KRQLRLREVASVNLPKVTHTFFL*QCFGYR
Trigger: TCTGTATCCGAAACATTGTCAAAGAAAGAAGGTGTG...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTCAACCGGGTGCCAGCTaGAGCAGCTTAGGCACGTTC +
Preference number: 4 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLQPGAS*SSLGTF
Trigger: GAACGTGCCTAAGCTGCTGCAGCTGGCACCCGGTTG...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGAGTTCCACCATTTCTCTaGACAGAAGTGGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARVPPFL*TEVAAP
Trigger: TGGTGCTGCCACTTCTGTGCAGAGAAATGGTGGAAC...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp GACCAGTTCTTCCCATCTACCATGTGGGGACACAGCAAGAAGGTACCATCTATGCATGTTGAATTGTGTTaGAAAGATAGCCACTCCTGG +
Preference number: 4 (lower is better)
Translates to: DQFFPSTMWGHSKKVPSMHVELC*KDSHSW
Trigger: CCAGGAGTGGCTATCTTTGCAACACAATTCAACATG...CATAGATGGTACCTTCTTGCTGTGTCCCCACATGGTAGATGGGAAGAACTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCGAGCAGACACAAATGTaGTTATCACCATCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: KGLEYPQILGSSGVLEPIEQTQM*LSPSLR
Trigger: CCTCAGGGATGGTGATAAGCACATTTGTGTCTGCTC...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGACTGTCCACAGGTAGGTaGTATAGAGGGAGCTGTACA +
Preference number: 4 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARLSTGR*YRGSCT
Trigger: TGTACAGCTCCCTCTATAGCACCTACCTGTGGACAG...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCTCCAGCAGAAGTCTTTaGACCACACCTTCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPSSRSL*TTPSFF
Trigger: AAAGAAAGAAGGTGTGGTGCAAAGACTTCTGCTGGA...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTGATCTCTGCTTCGTCTaGAACCTTGGAGTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVDLCFV*NLGVAR
Trigger: CCTCGCCACTCCAAGGTTGCAGACGAAGCAGAGATC...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp GACCAGTTCTTCCCATCTACCATGTGGGGACACAGCAAGAAGGTACCATCTATGGTTCCAACTGTTGTGTaGTCAGTGTTCAGATTGTGT +
Preference number: 4 (lower is better)
Translates to: DQFFPSTMWGHSKKVPSMVPTVV*SVFRLC
Trigger: ACACAATCTGAACACTGAGCACACAACAGTTGGAAC...CATAGATGGTACCTTCTTGCTGTGTCCCCACATGGTAGATGGGAAGAACTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGCCTAGTCCTTTGGCCTaGGTTGATGTTATGACATTG +
Preference number: 4 (lower is better)
Translates to: PCACGGSTSFHILQKRQLPSPLA*VDVMTL
Trigger: CAATGTCATAACATCAACCCAGGCCAAAGGACTAGG...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCTTCTCTGCACAGAAGTaGCAGCACCAGAAGTTTAGC +
Preference number: 4 (lower is better)
Translates to: KGLEYPQILGSSGVLEPIFSAQK*QHQKFS
Trigger: GCTAAACTTCTGGTGCTGCCACTTCTGTGCAGAGAA...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGAAAGATAGCCACTCCTaGTGCTACAGGAAATACACC +
Preference number: 4 (lower is better)
Translates to: PCACGGSTSFHILQKRQLKDSHS*CYRKYT
Trigger: GGTGTATTTCCTGTAGCACCAGGAGTGGCTATCTTT...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGAGATGGCATATGCCAATaGCTTAGGGTCCATAGTGGG +
Preference number: 4 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARDGICQ*LRVHSG
Trigger: CCCACTATGGACCCTAAGCCATTGGCATATGCCATC...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGATGTCGGGTCAGTTGCTaGTCTCCACTCTGTAGATAC +
Preference number: 4 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARCRVSC*SPLCRY
Trigger: GTATCTACAGAGTGGAGACCAGCAACTGACCCGACA...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCAGTCTCCAAAGTAGCTaGGACTACAGGCATGCACTA +
Preference number: 4 (lower is better)
Translates to: KGLEYPQILGSSGVLEPISLQSS*DYRHAL
Trigger: TAGTGCATGCCTGTAGTCCCAGCTACTTTGGAGACT...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTATGAACCACCGCGCCTaGCCCCCATGCAGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVMNHRA*PPCRFL
Trigger: TAAAAACCTGCATGGGGGCCAGGCGCGGTGGTTCAT...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp TTTTCACAGGAGAATAGAAGCTCCATGAGGATAGGAATCATATTTGTTCCAACTGCAGTGGCGCGATCTTaGTTCACTGCAAGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: FSQENRSSMRIGIIFVPTAVARS*FTASSA
Trigger: GGCGGAGCTTGCAGTGAACCAAGATCGCGCCACTGC...AGTTGGAACAAATATGATTCCTATCCTCATGGAGCTTCTATTCTCCTGTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCAAGTCTTGGTCATATTaGCTGCAATGGTTAAGTTCT +
Preference number: 4 (lower is better)
Translates to: KRQLRLREVASVNLPKVTKSWSY*LQWLSS
Trigger: AGAACTTAACCATTGCAGTCAATATGACCAAGACTT...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCGCTTATCACCATCCCTaGGGTTATAATTTCTACTTC +
Preference number: 4 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPAYHHP*GYNFYF
Trigger: GAAGTAGAAATTATAACCTCAGGGATGGTGATAAGC...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGAAGGCAGAAACGTACATaGTGGGAGCAGACACAAATG +
Preference number: 4 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARRQKRT*WEQTQM
Trigger: CATTTGTGTCTGCTCCCATCATGTACGTTTCTGCCT...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCCAGCGACTCACACAATaGTTGTTTTTCTCAAACGAA +
Preference number: 4 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPQRLTQ*LFFSNE
Trigger: TTCGTTTGAGAAAAACAATCATTGTGTGAGTCGCTG...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCTTCCAGGCTCTTGGTTaGATAGCCACCATAAACAAC +
Preference number: 4 (lower is better)
Translates to: KGLEYPQILGSSGVLEPIFQALG*IATINN
Trigger: GTTGTTTATGGTGGCTATTCAACCAAGAGCCTGGAA...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCAAGGAAATAAATCCCTaGCCAAAGTTAAACACGGCA +
Preference number: 4 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPKEINP*PKLNTA
Trigger: TGCCGTGTTTAACTTTGGTCAGGGATTTATTTCCTT...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCCACACCTTCTTTCTTTaGCAATGTTTCGGATACAGA +
Preference number: 4 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPHTFFL*QCFGYR
Trigger: TCTGTATCCGAAACATTGTCAAAGAAAGAAGGTGTG...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGATACGCGGCTAGAATATaGTTCCATGTAGGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARYAARI*FHVGFS
Trigger: GGAGAACCCTACATGGAATCATATTCTAGCCGCGTA...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTCTCGAACTCCTGGGCTaGAGCAATTCACCTGCCTCG +
Preference number: 4 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLLELLG*SNSPAS
Trigger: CGAGGCAGGTGAATTGCTTCAGCCCAGGAGTTCGAG...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCGATAGCCACTCCTGGTaGTACAGGAAATACACCATA +
Preference number: 4 (lower is better)
Translates to: KGLEYPQILGSSGVLEPIDSHSW*YRKYTI
Trigger: TATGGTGTATTTCCTGTAGCACCAGGAGTGGCTATC...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp GACCAGTTCTTCCCATCTACCATGTGGGGACACAGCAAGAAGGTACCATCTATGAGAAGGCTGAGTCAATaGTATCTCCATTGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: DQFFPSTMWGHSKKVPSMRRLSQ*YLHCVF
Trigger: GAAAACACAATGGAGATAGCATTGACTCAGCCTTCT...CATAGATGGTACCTTCTTGCTGTGTCCCCACATGGTAGATGGGAAGAACTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGATCACAGGCTCACTGGTaGTTGTGTTTGCTATTGGCT +
Preference number: 4 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARSQAHW*LCLLLA
Trigger: AGCCAATAGCAAACACAAGCACCAGTGAGCCTGTGA...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGCTGTTGGAGAGTGTTTaGATTAATAGCAGGAGGACT +
Preference number: 4 (lower is better)
Translates to: PCACGGSTSFHILQKRQLLLESV*INSRRT
Trigger: AGTCCTCCTGCTATTAATGCAAACACTCTCCAACAG...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTATATCCTGCATTACGATaGTTTGTTCAAACACAGAAA +
Preference number: 4 (lower is better)
Translates to: QLRLREVASVNLPKVTQLYPALR*FVQTQK
Trigger: TTTCTGTGTTTGAACAAAGCATCGTAATGCAGGATA...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTAGCTGGGACTATAGGTaGCCACCACCACGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLSWDYR*PPPRLA
Trigger: AGCCAGACGTGGTGGTGGGCACCTATAGTCCCAGCT...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp TTTTCACAGGAGAATAGAAGCTCCATGAGGATAGGAATCATATTTGTTCCAACTAGCTGGGACTATAGGTaGCCACCACCACGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: FSQENRSSMRIGIIFVPTSWDYR*PPPRLA
Trigger: AGCCAGACGTGGTGGTGGGCACCTATAGTCCCAGCT...AGTTGGAACAAATATGATTCCTATCCTCATGGAGCTTCTATTCTCCTGTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCTAGTCCTTTGGCCTaGGTTGATGTTATGACATTG +
Preference number: 4 (lower is better)
Translates to: KGLEYPQILGSSGVLEPIPSPLA*VDVMTL
Trigger: CAATGTCATAACATCAACCCAGGCCAAAGGACTAGG...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCCTGGAAGTGCAAATCTaGAGACAAAATTTCCTAGTC +
Preference number: 4 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPLEVQI*RQNFLV
Trigger: GACTAGGAAATTTTGTCTCCAGATTTGCACTTCCAG...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCATCGACTATCAGGACTaGCAACCAATAAGGTTAATA +
Preference number: 4 (lower is better)
Translates to: KRQLRLREVASVNLPKVTIDYQD*QPIRLI
Trigger: TATTAACCTTATTGGTTGCCAGTCCTGATAGTCGAT...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGATTCTCTGCACAGAAGTaGCAGCACCAGAAGTTTAGC +
Preference number: 4 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARFSAQK*QHQKFS
Trigger: GCTAAACTTCTGGTGCTGCCACTTCTGTGCAGAGAA...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGTTTGATAAACTTGTATaGTTCACCACACTGTCGCCC +
Preference number: 4 (lower is better)
Translates to: PCACGGSTSFHILQKRQLFDKLV*FTTLSP
Trigger: GGGCGACAGTGTGGTGAACCATACAAGTTTATCAAA...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGTTCTGGTTCATTTACTaGTGCTGGACTCTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: PCACGGSTSFHILQKRQLFWFIY*CWTLLK
Trigger: TTTGAGGAGAGTCCAGCACCAGTAAATGAACCAGAA...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCGCTTGTAAAAAGTTCTaGTTCATTTACTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPACKKF*FIYWCW
Trigger: CCAGCACCAGTAAATGAACCAGAACTTTTTACAAGC...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGAGTCTTCCAGGCTCTTaGTTGAATAGCCACCATAAA +
Preference number: 4 (lower is better)
Translates to: PCACGGSTSFHILQKRQLSLPGS*LNSHHK
Trigger: TTTATGGTGGCTATTCAACCAAGAGCCTGGAAGACT...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
3UTR CAA 72 bp AGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTaGCCCAAGGTCACCCAGCTAAAAACTAATGAATAC +
Preference number: 4 (lower is better)
Translates to: RQLRLREVASVN*PKVTQLKTNEY
Trigger: GTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCTTTTTCCCACCATCGTaGGACCAAGATAAAATAGGG +
Preference number: 4 (lower is better)
Translates to: KGLEYPQILGSSGVLEPIFFPPS*DQDKIG
Trigger: CCCTATTTTATCTTGGTCTCACGATGGTGGGAAAAA...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGGCTTATCACCATCCCTaGGGTTATAATTTCTACTTC +
Preference number: 4 (lower is better)
Translates to: PCACGGSTSFHILQKRQLAYHHP*GYNFYF
Trigger: GAAGTAGAAATTATAACCTCAGGGATGGTGATAAGC...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCAAATCCATGCGTTACTaGTGTAGGCAAAGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: KGLEYPQILGSSGVLEPIKSMRY*CRQSLG
Trigger: ACCAAGACTTTGCCTACAGCAGTAACGCATGGATTT...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGAAGCCACAAAGGACAATaGCAAAGCATTCCAGTAAGG +
Preference number: 4 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARSHKGQ*QSIPVR
Trigger: CCTTACTGGAATGCTTTGGCATTGTCCTTTGTGGCT...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCTATAGGGTATCCCAATaGAAAGTCATTACTTTGTGT +
Preference number: 4 (lower is better)
Translates to: KRQLRLREVASVNLPKVTYRVSQ*KVITLC
Trigger: ACACAAAGTAATGACTTTGCATTGGGATACCCTATA...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCATAAGAGATATTGGTaGCACCAAATAAATGTACTG +
Preference number: 4 (lower is better)
Translates to: KRQLRLREVASVNLPKVTHKRYW*HQINVL
Trigger: CAGTACATTTATTTGGTGGCACCAATATCTCTTATG...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGAATTCTGGATGGCATATaGCAATGGCTTAGGGTCCAT +
Preference number: 4 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARILDGI*QWLRVH
Trigger: ATGGACCCTAAGCCATTGGCATATGCCATCCAGAAT...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTCTGTCCACAGGTAGGTaGTATAGAGGGAGCTGTACA +
Preference number: 4 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVLSTGR*YRGSCT
Trigger: TGTACAGCTCCCTCTATAGCACCTACCTGTGGACAG...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGATGGTTCATTTACTGGTaGTGGACTCTCCTCAAAAGC +
Preference number: 4 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARWFIYW*WTLLKS
Trigger: GCTTTTGAGGAGAGTCCAGCACCAGTAAATGAACCA...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCTGTTGGAGAGTGTTTaGATTAATAGCAGGAGGACT +
Preference number: 4 (lower is better)
Translates to: KGLEYPQILGSSGVLEPILLESV*INSRRT
Trigger: AGTCCTCCTGCTATTAATGCAAACACTCTCCAACAG...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCATCAGATTGTACTTCTaGAGGACTGTGGAGATAATA +
Preference number: 4 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPIRLYF*RTVEII
Trigger: TATTATCTCCACAGTCCTGCAGAAGTACAATCTGAT...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp TTTTCACAGGAGAATAGAAGCTCCATGAGGATAGGAATCATATTTGTTCCAACTCTGAAGCAATTCACCTaGCTCGGCCTCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: FSQENRSSMRIGIIFVPTLKQFT*LGLPKC
Trigger: GCACTTTGGGAGGCCGAGGCAGGTGAATTGCTTCAG...AGTTGGAACAAATATGATTCCTATCCTCATGGAGCTTCTATTCTCCTGTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGACCTAGTCCTTTGGCCTaGGTTGATGTTATGACATTG +
Preference number: 4 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARPSPLA*VDVMTL
Trigger: CAATGTCATAACATCAACCCAGGCCAAAGGACTAGG...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGCTGGAAGTGCAAATCTaGAGACAAAATTTCCTAGTC +
Preference number: 4 (lower is better)
Translates to: PCACGGSTSFHILQKRQLLEVQI*RQNFLV
Trigger: GACTAGGAAATTTTGTCTCCAGATTTGCACTTCCAG...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCTTTGATAAACTTGTATaGTTCACCACACTGTCGCCC +
Preference number: 4 (lower is better)
Translates to: KGLEYPQILGSSGVLEPIFDKLV*FTTLSP
Trigger: GGGCGACAGTGTGGTGAACCATACAAGTTTATCAAA...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGTCAAAACTAACATTCTaGATGGCATATGCCAATGGC +
Preference number: 4 (lower is better)
Translates to: PCACGGSTSFHILQKRQLSKLTF*MAYANG
Trigger: GCCATTGGCATATGCCATCCAGAATGTTAGTTTTGA...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGGCTTGTAAAAAGTTCTaGTTCATTTACTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PCACGGSTSFHILQKRQLACKKF*FIYWCW
Trigger: CCAGCACCAGTAAATGAACCAGAACTTTTTACAAGC...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGAGAATCACAGGCTCACTaGTGCTTGTGTTTGCTATTG +
Preference number: 4 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARESQAH*CLCLLL
Trigger: CAATAGCAAACACAAGCACCAGTGAGCCTGTGATTC...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGATACTGTTCTTCTTCCTaGGCTAATATGCAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARYCSSS*ANMQLW
Trigger: CCAGAGCTGCATATTAGCCCAGGAAGAAGAACAGTA...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTTGTCGGGTCAGTTGCTaGTCTCCACTCTGTAGATAC +
Preference number: 4 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVCRVSC*SPLCRY
Trigger: GTATCTACAGAGTGGAGACCAGCAACTGACCCGACA...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCAGTCTTCCAGGCTCTTaGTTGAATAGCCACCATAAA +
Preference number: 4 (lower is better)
Translates to: KGLEYPQILGSSGVLEPISLPGS*LNSHHK
Trigger: TTTATGGTGGCTATTCAACCAAGAGCCTGGAAGACT...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGATCGTTGGTAATATGTTaGATGACTCCCCCTTGTACC +
Preference number: 4 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARSLVIC*MTPPCT
Trigger: GGTACAAGGGGGAGTCATCCAACATATTACCAACGA...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTTCCGATAAAGTAAGGTaGGGTAAGCCGATGCGGCCC +
Preference number: 4 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLSDKVR*GKPMRP
Trigger: GGGCCGCATCGGCTTACCCCACCTTACTTTATCGGA...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392551.6
ENST00000614352.4
CDS-3UTR CCA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGTACCTGAAGATGCTATaGTCTAAATGTCTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: PCACGGSTSFHILQKRQLYLKML*SKCLCP
Trigger: AGGACACAGACATTTAGACCATAGCATCTTCAGGTA...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGTCAAGGAGATCAGGCTaGCAATACTTATATCAAAAC +
Preference number: 4 (lower is better)
Translates to: PCACGGSTSFHILQKRQLSRRSG*QYLYQN
Trigger: GTTTTGATATAAGTATTGTCAGCCTGATCTCCTTGA...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
CDS-3UTR TCA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGGCACAGACAATAGACTaGGCAATGAGTAAATTAGTT +
Preference number: 4 (lower is better)
Translates to: PCACGGSTSFHILQKRQLAQTID*AMSKLV
Trigger: AACTAATTTACTCATTGCTCAGTCTATTGTCTGTGC...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
CDS-3UTR TCA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGCCCAGCCAGATATTATaGTTATTCCAACAGGAATTT +
Preference number: 4 (lower is better)
Translates to: PCACGGSTSFHILQKRQLPSQIL*LFQQEF
Trigger: AAATTCCTGTTGGAATAATCATAATATCTGGCTGGG...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCTCCATAAAAGAAGGCTaGGTCAATGCTATCTCCATT +
Preference number: 4 (lower is better)
Translates to: KGLEYPQILGSSGVLEPISIKEG*VNAISI
Trigger: AATGGAGATAGCATTGACTCAGCCTTCTTTTATGGA...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTTCTGGTTCATGCACATaGGGGATATGCCAGCTATCA +
Preference number: 4 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVSGSCT*GICQLS
Trigger: TGATAGCTGGCATATCCCTCATGTGCATGAACCAGA...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCAGCGACTCACACAATaGTTGTTTTTCTCAAACGAA +
Preference number: 4 (lower is better)
Translates to: KGLEYPQILGSSGVLEPIQRLTQ*LFFSNE
Trigger: TTCGTTTGAGAAAAACAATCATTGTGTGAGTCGCTG...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCACACCTTCTTTCTTTaGCAATGTTTCGGATACAGA +
Preference number: 4 (lower is better)
Translates to: KGLEYPQILGSSGVLEPIHTFFL*QCFGYR
Trigger: TCTGTATCCGAAACATTGTCAAAGAAAGAAGGTGTG...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTTACGCGGCTAGAATATaGTTCCATGTAGGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVYAARI*FHVGFS
Trigger: GGAGAACCCTACATGGAATCATATTCTAGCCGCGTA...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGAAAATCCATGCGTTACTaGTGTAGGCAAAGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARKSMRY*CRQSLG
Trigger: ACCAAGACTTTGCCTACAGCAGTAACGCATGGATTT...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCCATAAGAGATATTGGTaGCACCAAATAAATGTACTG +
Preference number: 4 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPHKRYW*HQINVL
Trigger: CAGTACATTTATTTGGTGGCACCAATATCTCTTATG...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGACATGTTGAATTGTGTTaGAAAGATAGCCACTCCTGG +
Preference number: 4 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARHVELC*KDSHSW
Trigger: CCAGGAGTGGCTATCTTTGCAACACAATTCAACATG...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTTCACAGGCTCACTGGTaGTTGTGTTTGCTATTGGCT +
Preference number: 4 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVSQAHW*LCLLLA
Trigger: AGCCAATAGCAAACACAAGCACCAGTGAGCCTGTGA...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGGAGGGTGGGGATGAATaGTCAATTTCTTTATATCTT +
Preference number: 4 (lower is better)
Translates to: PCACGGSTSFHILQKRQLEGGDE*SISLYL
Trigger: AAGATATAAAGAAATTGAGCATTCATCCCCACCCTC...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTTTGGGAAACCCTGTTTaGAGAGCCCAGAGTCATGAA +
Preference number: 4 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVLGNPV*RAQSHE
Trigger: TTCATGACTCTGGGCTCTGCAAACAGGGTTTCCCAA...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTTTCTCTGCACAGAAGTaGCAGCACCAGAAGTTTAGC +
Preference number: 4 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVFSAQK*QHQKFS
Trigger: GCTAAACTTCTGGTGCTGCCACTTCTGTGCAGAGAA...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCTCAAAACTAACATTCTaGATGGCATATGCCAATGGC +
Preference number: 4 (lower is better)
Translates to: KGLEYPQILGSSGVLEPISKLTF*MAYANG
Trigger: GCCATTGGCATATGCCATCCAGAATGTTAGTTTTGA...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCGCTTGTAAAAAGTTCTaGTTCATTTACTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: KGLEYPQILGSSGVLEPIACKKF*FIYWCW
Trigger: CCAGCACCAGTAAATGAACCAGAACTTTTTACAAGC...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGAAGTCTTCCAGGCTCTTaGTTGAATAGCCACCATAAA +
Preference number: 4 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARSLPGS*LNSHHK
Trigger: TTTATGGTGGCTATTCAACCAAGAGCCTGGAAGACT...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTAGTCTCCAAAGTAGCTaGGACTACAGGCATGCACTA +
Preference number: 4 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVSLQSS*DYRHAL
Trigger: TAGTGCATGCCTGTAGTCCCAGCTACTTTGGAGACT...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
3UTR CAA 72 bp ACCATTTTATATAAGGGACTTGAGTATCCTCAGATTTaGGGATCTTCAGGAGTCCTGGAACCAATCCCCTTG +
Preference number: 4 (lower is better)
Translates to: TILYKGLEYPQI*GSSGVLEPIPL
Trigger: CAAGGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTTATATAAAATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCTCAAGGAGATCAGGCTaGCAATACTTATATCAAAAC +
Preference number: 4 (lower is better)
Translates to: KGLEYPQILGSSGVLEPISRRSG*QYLYQN
Trigger: GTTTTGATATAAGTATTGTCAGCCTGATCTCCTTGA...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
CDS-3UTR TCA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTTTCCAGGCTCTTGGTTaGATAGCCACCATAAACAAC +
Preference number: 4 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVFQALG*IATINN
Trigger: GTTGTTTATGGTGGCTATTCAACCAAGAGCCTGGAA...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTTACAGAAGAGACAACTaGGGCTCAGAGAGGTTGCCT +
Preference number: 4 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLYRRDN*GSERLP
Trigger: AGGCAACCTCTCTGAGCCTCAGTTGTCTCTTCTGTA...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTTCCAGCCATCACTCATaGCAGGACTACCTATGTGCA +
Preference number: 4 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLSSHHS*QDYLCA
Trigger: TGCACATAGGTAGTCCTGTCATGAGTGATGGCTGGA...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCACAAGGAGATCAGGCTaGCAATACTTATATCAAAAC +
Preference number: 4 (lower is better)
Translates to: KGLEYPQILGSSGVLEPITRRSG*QYLYQN
Trigger: GTTTTGATATAAGTATTGTCAGCCTGATCTCCTTGT...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614352.4
CDS-3UTR GCA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTAGCCACAAAGGACAATaGCAAAGCATTCCAGTAAGG +
Preference number: 4 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVSHKGQ*QSIPVR
Trigger: CCTTACTGGAATGCTTTGGCATTGTCCTTTGTGGCT...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTGACATTGGCCCTTCCTaGTATGTAGCCACAAAGGAC +
Preference number: 4 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLDIGPS*YVATKD
Trigger: GTCCTTTGTGGCTACATAGCAGGAAGGGCCAATGTC...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp TTTTCACAGGAGAATAGAAGCTCCATGAGGATAGGAATCATATTTGTTCCAACTGACATTGGCCCTTCCTaGTATGTAGCCACAAAGGAC +
Preference number: 4 (lower is better)
Translates to: FSQENRSSMRIGIIFVPTDIGPS*YVATKD
Trigger: GTCCTTTGTGGCTACATAGCAGGAAGGGCCAATGTC...AGTTGGAACAAATATGATTCCTATCCTCATGGAGCTTCTATTCTCCTGTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTATTCTGGATGGCATATaGCAATGGCTTAGGGTCCAT +
Preference number: 4 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVILDGI*QWLRVH
Trigger: ATGGACCCTAAGCCATTGGCATATGCCATCCAGAAT...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp TTTTCACAGGAGAATAGAAGCTCCATGAGGATAGGAATCATATTTGTTCCAACTCTGTCCACAGGTAGGTaGTATAGAGGGAGCTGTACA +
Preference number: 4 (lower is better)
Translates to: FSQENRSSMRIGIIFVPTLSTGR*YRGSCT
Trigger: TGTACAGCTCCCTCTATAGCACCTACCTGTGGACAG...AGTTGGAACAAATATGATTCCTATCCTCATGGAGCTTCTATTCTCCTGTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGAAGAAGGCTGAGTCAATaGTATCTCCATTGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARRRLSQ*YLHCVF
Trigger: GAAAACACAATGGAGATAGCATTGACTCAGCCTTCT...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTGCAGAACAGGGTGACTaGTGTGGTGATCATCTGTTC +
Preference number: 4 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLAEQGD*CGDHLF
Trigger: GAACAGATGATCACCACAGCAGTCACCCTGTTCTGC...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTTGGTTCATTTACTGGTaGTGGACTCTCCTCAAAAGC +
Preference number: 4 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVWFIYW*WTLLKS
Trigger: GCTTTTGAGGAGAGTCCAGCACCAGTAAATGAACCA...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTACATGTCGGGTCAGTTaGTGGTCTCCACTCTGTAGA +
Preference number: 4 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLTCRVS*WSPLCR
Trigger: TCTACAGAGTGGAGACCAGCAACTGACCCGACATGT...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCGAGGGTGGGGATGAATaGTCAATTTCTTTATATCTT +
Preference number: 4 (lower is better)
Translates to: KGLEYPQILGSSGVLEPIEGGDE*SISLYL
Trigger: AAGATATAAAGAAATTGAGCATTCATCCCCACCCTC...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTTCACCCAGGTTGAAGTaGAGTGATGTGATCTTGGTT +
Preference number: 4 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVSPRLK*SDVILV
Trigger: AACCAAGATCACATCACTGCACTTCAACCTGGGTGA...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTCTCGACCTCCCAAAGTaGTGGGATTGCAGGTATGAA +
Preference number: 4 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLLDLPK*WDCRYE
Trigger: TTCATACCTGCAATCCCAGCACTTTGGGAGGTCGAG...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGACTGGAAGTGCAAATCTaGAGACAAAATTTCCTAGTC +
Preference number: 4 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARLEVQI*RQNFLV
Trigger: GACTAGGAAATTTTGTCTCCAGATTTGCACTTCCAG...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCATCGACTATCAGGACTaGCAACCAATAAGGTTAATA +
Preference number: 4 (lower is better)
Translates to: KGLEYPQILGSSGVLEPIIDYQD*QPIRLI
Trigger: TATTAACCTTATTGGTTGCCAGTCCTGATAGTCGAT...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTTACTGTTCTTCTTCCTaGGCTAATATGCAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVYCSSS*ANMQLW
Trigger: CCAGAGCTGCATATTAGCCCAGGAAGAAGAACAGTA...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTTGTCGGGTCAGTTGCTaGTCTCCACTCTGTAGATAC +
Preference number: 4 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLCRVSC*SPLCRY
Trigger: GTATCTACAGAGTGGAGACCAGCAACTGACCCGACA...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTTCGTTGGTAATATGTTaGATGACTCCCCCTTGTACC +
Preference number: 4 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVSLVIC*MTPPCT
Trigger: GGTACAAGGGGGAGTCATCCAACATATTACCAACGA...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGAGCACAGACAATAGACTaGGCAATGAGTAAATTAGTT +
Preference number: 4 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARAQTID*AMSKLV
Trigger: AACTAATTTACTCATTGCTCAGTCTATTGTCTGTGC...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
CDS-3UTR TCA 90 bp TTTTCACAGGAGAATAGAAGCTCCATGAGGATAGGAATCATATTTGTTCCAACTTACGCGGCTAGAATATaGTTCCATGTAGGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: FSQENRSSMRIGIIFVPTYAARI*FHVGFS
Trigger: GGAGAACCCTACATGGAATCATATTCTAGCCGCGTA...AGTTGGAACAAATATGATTCCTATCCTCATGGAGCTTCTATTCTCCTGTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTCAGAGCCCAGAGTCATaGAGAACAGAACTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLQSPES*RTELRK
Trigger: TTTCCTGAGTTCTGTTCTTCATGACTCTGGGCTCTG...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTCATGTTGAATTGTGTTaGAAAGATAGCCACTCCTGG +
Preference number: 4 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVHVELC*KDSHSW
Trigger: CCAGGAGTGGCTATCTTTGCAACACAATTCAACATG...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTGAGCAGACACAAATGTaGTTATCACCATCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLEQTQM*LSPSLR
Trigger: CCTCAGGGATGGTGATAAGCACATTTGTGTCTGCTC...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp TTTTCACAGGAGAATAGAAGCTCCATGAGGATAGGAATCATATTTGTTCCAACTTCACAGGCTCACTGGTaGTTGTGTTTGCTATTGGCT +
Preference number: 4 (lower is better)
Translates to: FSQENRSSMRIGIIFVPTSQAHW*LCLLLA
Trigger: AGCCAATAGCAAACACAAGCACCAGTGAGCCTGTGA...AGTTGGAACAAATATGATTCCTATCCTCATGGAGCTTCTATTCTCCTGTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGAATCAGATTGTACTTCTaGAGGACTGTGGAGATAATA +
Preference number: 4 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARIRLYF*RTVEII
Trigger: TATTATCTCCACAGTCCTGCAGAAGTACAATCTGAT...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGAATCGACTATCAGGACTaGCAACCAATAAGGTTAATA +
Preference number: 4 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARIDYQD*QPIRLI
Trigger: TATTAACCTTATTGGTTGCCAGTCCTGATAGTCGAT...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTATTCACCATTTCCCATaGAGCAGGAGCAGCAACTTG +
Preference number: 4 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLIHHFP*SRSSNL
Trigger: CAAGTTGCTGCTCCTGCTCCATGGGAAATGGTGAAT...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTGCTTATCACCATCCCTaGGGTTATAATTTCTACTTC +
Preference number: 4 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVAYHHP*GYNFYF
Trigger: GAAGTAGAAATTATAACCTCAGGGATGGTGATAAGC...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTTCCATAAAAGAAGGCTaGGTCAATGCTATCTCCATT +
Preference number: 4 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVSIKEG*VNAISI
Trigger: AATGGAGATAGCATTGACTCAGCCTTCTTTTATGGA...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGATATAGGGTATCCCAATaGAAAGTCATTACTTTGTGT +
Preference number: 4 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARYRVSQ*KVITLC
Trigger: ACACAAAGTAATGACTTTGCATTGGGATACCCTATA...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGACATAAGAGATATTGGTaGCACCAAATAAATGTACTG +
Preference number: 4 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARHKRYW*HQINVL
Trigger: CAGTACATTTATTTGGTGGCACCAATATCTCTTATG...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTAGAAGGCTGAGTCAATaGTATCTCCATTGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVRRLSQ*YLHCVF
Trigger: GAAAACACAATGGAGATAGCATTGACTCAGCCTTCT...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTCTTTATAATCACATCTaGTTCGTCTGCAACCTTGGA +
Preference number: 4 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVLYNHI*FVCNLG
Trigger: TCCAAGGTTGCAGACGAAGCAGATGTGATTATAAAG...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392551.6
CDS-3UTR GCA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTTCACCCAGGTTGAAGTaGAGTGATGTGATCTTGGTT +
Preference number: 4 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLSPRLK*SDVILV
Trigger: AACCAAGATCACATCACTGCACTTCAACCTGGGTGA...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp TTTTCACAGGAGAATAGAAGCTCCATGAGGATAGGAATCATATTTGTTCCAACTCCTAGTCCTTTGGCCTaGGTTGATGTTATGACATTG +
Preference number: 4 (lower is better)
Translates to: FSQENRSSMRIGIIFVPTPSPLA*VDVMTL
Trigger: CAATGTCATAACATCAACCCAGGCCAAAGGACTAGG...AGTTGGAACAAATATGATTCCTATCCTCATGGAGCTTCTATTCTCCTGTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTGCTTGTAAAAAGTTCTaGTTCATTTACTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVACKKF*FIYWCW
Trigger: CCAGCACCAGTAAATGAACCAGAACTTTTTACAAGC...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTTCGTTGGTAATATGTTaGATGACTCCCCCTTGTACC +
Preference number: 4 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLSLVIC*MTPPCT
Trigger: GGTACAAGGGGGAGTCATCCAACATATTACCAACGA...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTAAGTCTTGGTCATATTaGCTGCAATGGTTAAGTTCT +
Preference number: 4 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVKSWSY*LQWLSS
Trigger: AGAACTTAACCATTGCAGTCAATATGACCAAGACTT...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTAAATCCATGCGTTACTaGTGTAGGCAAAGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLKSMRY*CRQSLG
Trigger: ACCAAGACTTTGCCTACAGCAGTAACGCATGGATTT...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp TTTTCACAGGAGAATAGAAGCTCCATGAGGATAGGAATCATATTTGTTCCAACTCTGTTGGAGAGTGTTTaGATTAATAGCAGGAGGACT +
Preference number: 4 (lower is better)
Translates to: FSQENRSSMRIGIIFVPTLLESV*INSRRT
Trigger: AGTCCTCCTGCTATTAATGCAAACACTCTCCAACAG...AGTTGGAACAAATATGATTCCTATCCTCATGGAGCTTCTATTCTCCTGTGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTGTTCCAACTGTTGTGTaGTCAGTGTTCAGATTGTGT +
Preference number: 4 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLVPTVV*SVFRLC
Trigger: ACACAATCTGAACACTGAGCACACAACAGTTGGAAC...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTATCGACTATCAGGACTaGCAACCAATAAGGTTAATA +
Preference number: 4 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVIDYQD*QPIRLI
Trigger: TATTAACCTTATTGGTTGCCAGTCCTGATAGTCGAT...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTTTCTGGTTCATTTACTaGTGCTGGACTCTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLFWFIY*CWTLLK
Trigger: TTTGAGGAGAGTCCAGCACCAGTAAATGAACCAGAA...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTTGTTCAGATTGTGTCTaGAACATGCTAGATGCTCGA +
Preference number: 4 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLCSDCV*NMLDAR
Trigger: TCGAGCATCTAGCATGTTCCAGACACAATCTGAACA...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp TTTTCACAGGAGAATAGAAGCTCCATGAGGATAGGAATCATATTTGTTCCAACTTGTTCAGATTGTGTCTaGAACATGCTAGATGCTCGA +
Preference number: 4 (lower is better)
Translates to: FSQENRSSMRIGIIFVPTCSDCV*NMLDAR
Trigger: TCGAGCATCTAGCATGTTCCAGACACAATCTGAACA...AGTTGGAACAAATATGATTCCTATCCTCATGGAGCTTCTATTCTCCTGTGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
3UTR CAA 72 bp ATATTTGTTCCAACTGTTGTGTGCTCAGTGTTCAGATaGTGTCTGGAACATGCTAGATGCTCGATAAGTTAT +
Preference number: 4 (lower is better)
Translates to: IFVPTVVCSVFR*CLEHARCSISY
Trigger: ATAACTTATCGAGCATCTAGCATGTTCCAGACACAATCTGAACACTGAGCACACAACAGTTGGAACAAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTGCTTATCACCATCCCTaGGGTTATAATTTCTACTTC +
Preference number: 4 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLAYHHP*GYNFYF
Trigger: GAAGTAGAAATTATAACCTCAGGGATGGTGATAAGC...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp TTTTCACAGGAGAATAGAAGCTCCATGAGGATAGGAATCATATTTGTTCCAACTTCCATAAAAGAAGGCTaGGTCAATGCTATCTCCATT +
Preference number: 4 (lower is better)
Translates to: FSQENRSSMRIGIIFVPTSIKEG*VNAISI
Trigger: AATGGAGATAGCATTGACTCAGCCTTCTTTTATGGA...AGTTGGAACAAATATGATTCCTATCCTCATGGAGCTTCTATTCTCCTGTGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTCAGCGACTCACACAATaGTTGTTTTTCTCAAACGAA +
Preference number: 4 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLQRLTQ*LFFSNE
Trigger: TTCGTTTGAGAAAAACAATCATTGTGTGAGTCGCTG...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTAAGGAAATAAATCCCTaGCCAAAGTTAAACACGGCA +
Preference number: 4 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLKEINP*PKLNTA
Trigger: TGCCGTGTTTAACTTTGGTCAGGGATTTATTTCCTT...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CCA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTTACCTGAAGATGCTATaGTCTAAATGTCTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLYLKML*SKCLCP
Trigger: AGGACACAGACATTTAGACCATAGCATCTTCAGGTA...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTTCAAGGAGATCAGGCTaGCAATACTTATATCAAAAC +
Preference number: 4 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLSRRSG*QYLYQN
Trigger: GTTTTGATATAAGTATTGTCAGCCTGATCTCCTTGA...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392551.6
ENST00000392552.7
CDS-3UTR TCA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTCCCAGCCAGATATTATaGTTATTCCAACAGGAATTT +
Preference number: 4 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLPSQIL*LFQQEF
Trigger: AAATTCCTGTTGGAATAATCATAATATCTGGCTGGG...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR TCA 90 bp TTTTCACAGGAGAATAGAAGCTCCATGAGGATAGGAATCATATTTGTTCCAACTCCCAGCCAGATATTATaGTTATTCCAACAGGAATTT +
Preference number: 4 (lower is better)
Translates to: FSQENRSSMRIGIIFVPTPSQIL*LFQQEF
Trigger: AAATTCCTGTTGGAATAATCATAATATCTGGCTGGG...AGTTGGAACAAATATGATTCCTATCCTCATGGAGCTTCTATTCTCCTGTGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTGAGGGTGGGGATGAATaGTCAATTTCTTTATATCTT +
Preference number: 4 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLEGGDE*SISLYL
Trigger: AAGATATAAAGAAATTGAGCATTCATCCCCACCCTC...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTATCAGATTGTACTTCTaGAGGACTGTGGAGATAATA +
Preference number: 4 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLIRLYF*RTVEII
Trigger: TATTATCTCCACAGTCCTGCAGAAGTACAATCTGAT...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp TTTTCACAGGAGAATAGAAGCTCCATGAGGATAGGAATCATATTTGTTCCAACTCATAAGAGATATTGGTaGCACCAAATAAATGTACTG +
Preference number: 4 (lower is better)
Translates to: FSQENRSSMRIGIIFVPTHKRYW*HQINVL
Trigger: CAGTACATTTATTTGGTGGCACCAATATCTCTTATG...AGTTGGAACAAATATGATTCCTATCCTCATGGAGCTTCTATTCTCCTGTGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR GCA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTTATCCTGCATTACGATaGTTTGTTCAAACACAGAAA +
Preference number: 4 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLYPALR*FVQTQK
Trigger: TTTCTGTGTTTGAACAAAGCATCGTAATGCAGGATA...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
3UTR CAA 72 bp GGGAATAAAGTAGAAGTTATCCTGCATTACGATGCTTaGTTCAAACACAGAAATGATACATCATATGGCAAT +
Preference number: 4 (lower is better)
Translates to: GNKVEVILHYDA*FKHRNDTSYGN
Trigger: ATTGCCATATGATGTATCATTTCTGTGTTTGAACAAAGCATCGTAATGCAGGATAACTTCTACTTTATTCCC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
3UTR CAA 72 bp TGGTCTAAATGTCTGTGTCCTCCTAGAATTCTTATGTaGAAACCTAATCCTCAATCATGTTTAACATCTGTT +
Preference number: 4 (lower is better)
Translates to: WSKCLCPPRILM*KPNPQSCLTSV
Trigger: AACAGATGTTAAACATGATTGAGGATTAGGTTTCAACATAAGAATTCTAGGAGGACACAGACATTTAGACCA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS CCA 90 bp GTACCTGCTTCGTCTGCAACCTTGGAGTGGCGAGGAGAAGGGAGCTaGTGCTCGCAGGGTGCCAAGCAGGGAGAAGACCACCGTCATCTC +
Preference number: 5 (lower is better)
Translates to: VPASSATLEWRGEGS*CSQGAKQGEDHRHL
Trigger: GAGATGACGGTGGTCTTCTCCCTGCTTGGCACCCTGCGAGCACCAGCTCCCTTCTCCTCGCCACTCCAAGGTTGCAGACGAAGCAGGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295500.8
ENST00000497620.1
CDS CCA 90 bp ACATCTGCTTCGTCTGCAACCTTGGAGTGGCGAGGAGAAGGGAGCTaGTGCTCGCAGGGTGCCAAGCAGGGAGAAGACCACCGTCATCTC +
Preference number: 5 (lower is better)
Translates to: TSASSATLEWRGEGS*CSQGAKQGEDHRHL
Trigger: GAGATGACGGTGGTCTTCTCCCTGCTTGGCACCCTGCGAGCACCAGCTCCCTTCTCCTCGCCACTCCAAGGTTGCAGACGAAGCAGATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392551.6
CDS CCA 90 bp ATCTCTGCTTCGTCTGCAACCTTGGAGTGGCGAGGAGAAGGGAGCTaGTGCTCGCAGGGTGCCAAGCAGGGAGAAGACCACCGTCATCTC +
Preference number: 5 (lower is better)
Translates to: ISASSATLEWRGEGS*CSQGAKQGEDHRHL
Trigger: GAGATGACGGTGGTCTTCTCCCTGCTTGGCACCCTGCGAGCACCAGCTCCCTTCTCCTCGCCACTCCAAGGTTGCAGACGAAGCAGAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS CCA 90 bp TCCTTAACATCTAGGACAGTACCTGCTTCGTCTGCAACCTTGGAGTaGCGAGGAGAAGGGAGCTGGTGCTCGCAGGGTGCCAAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: SLTSRTVPASSATLE*RGEGSWCSQGAKQG
Trigger: TCCCTGCTTGGCACCCTGCGAGCACCAGCTCCCTTCTCCTCGCCACTCCAAGGTTGCAGACGAAGCAGGTACTGTCCTAGATGTTAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295500.8
ENST00000497620.1
CDS-3UTR CAA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTACCGGGTTTCACCACGTaGCCCGGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: QLRLREVASVNLPKVTQLPGFTT*PGLVLN
Trigger: GTTCAAGACCAGCCCGGGCAACGTGGTGAAACCCGG...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS GCA 90 bp CCCGCCACACACACTGGCCCCAGGGACTTTGTGCCACAGGGACTTTaGACATTCAGTTCACTCAAGTGTCACGGAAGCAGGGACTATGCA +
Preference number: 5 (lower is better)
Translates to: PATHTGPRDFVPQGL*TFSSLKCHGSRDYA
Trigger: TGCATAGTCCCTGCTTCCGTGACACTTGAGTGAACTGAATGTGCAAAGTCCCTGTGGCACAAAGTCCCTGGGGCCAGTGTGTGTGGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295500.8
ENST00000497620.1
CDS-3UTR CAA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCCGGGTTTCACCACGTaGCCCGGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: KRQLRLREVASVNLPKVTPGFTT*PGLVLN
Trigger: GTTCAAGACCAGCCCGGGCAACGTGGTGAAACCCGG...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCGCTTCGTCTGCAACCTaGGAGTGGCGAGGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: KRQLRLREVASVNLPKVTASSAT*EWRGEG
Trigger: CCCTTCTCCTCGCCACTCCAAGGTTGCAGACGAAGC...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCTGCAGTGGCGCGATCTaGGTTCACTGCAAGCTCCGC +
Preference number: 5 (lower is better)
Translates to: KRQLRLREVASVNLPKVTCSGAI*VHCKLR
Trigger: GCGGAGCTTGCAGTGAACCAAGATCGCGCCACTGCA...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCGCTTCGTCTGCAACCTaGGAGTGGCGAGGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPASSAT*EWRGEG
Trigger: CCCTTCTCCTCGCCACTCCAAGGTTGCAGACGAAGC...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGCTGGCCCCAGGGACTTaGTGCCACAGGGACTTTGCA +
Preference number: 5 (lower is better)
Translates to: PCACGGSTSFHILQKRQLLAPGT*CHRDFA
Trigger: TGCAAAGTCCCTGTGGCACAAAGTCCCTGGGGCCAG...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295500.8
CDS-3UTR CAA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTAACCACACTGTCGCCCTaGTCCAAGAGTTCCACCATT +
Preference number: 5 (lower is better)
Translates to: QLRLREVASVNLPKVTQLTTLSP*SKSSTI
Trigger: AATGGTGGAACTCTTGGACAAGGGCGACAGTGTGGT...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCTTGGATGACTCCCCCTaGTACCAGCCTGTCTCCGTA +
Preference number: 5 (lower is better)
Translates to: KRQLRLREVASVNLPKVTLDDSP*YQPVSV
Trigger: TACGGAGACAGGCTGGTACAAGGGGGAGTCATCCAA...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCTTGGATGACTCCCCCTaGTACCAGCCTGTCTCCGTA +
Preference number: 5 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPLDDSP*YQPVSV
Trigger: TACGGAGACAGGCTGGTACAAGGGGGAGTCATCCAA...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTACTCGTTGGTAATATGTaGGATGACTCCCCCTTGTAC +
Preference number: 5 (lower is better)
Translates to: QLRLREVASVNLPKVTQLLVGNM*DDSPLY
Trigger: GTACAAGGGGGAGTCATCCAACATATTACCAACGAG...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTAGAGTATCCTCAGATTTaGGGATCTTCAGGAGTCCTG +
Preference number: 5 (lower is better)
Translates to: QLRLREVASVNLPKVTQLEYPQI*GSSGVL
Trigger: CAGGACTCCTGAAGATCCCAAAATCTGAGGATACTC...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCTGCAGTGATGTGATCTaGGTTCACTGCAACCTGCGC +
Preference number: 5 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPCSDVI*VHCNLR
Trigger: GCGCAGGTTGCAGTGAACCAAGATCACATCACTGCA...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS GCA 90 bp CACCACTTTGTGGCTCTGAGACTGATCGAAACCTTCATAGCTTCCTaGTTGGGCAGTCTGGTTCATGCACATGAGGGATATGCCAGCTAT +
Preference number: 5 (lower is better)
Translates to: HHFVALRLIETFIAS*LGSLVHAHEGYASY
Trigger: ATAGCTGGCATATCCCTCATGTGCATGAACCAGACTGCCCAAGCAGGAAGCTATGAAGGTTTCGATCAGTCTCAGAGCCACAAAGTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTATGCTTGTGTTTGCTATaGGCTCTATTGATGGGCAGT +
Preference number: 5 (lower is better)
Translates to: QLRLREVASVNLPKVTQLCLCLL*ALLMGS
Trigger: ACTGCCCATCAATAGAGCCAATAGCAAACACAAGCA...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTACTTCCAGGCTCTTGGTaGAATAGCCACCATAAACAA +
Preference number: 5 (lower is better)
Translates to: QLRLREVASVNLPKVTQLLPGSW*NSHHKQ
Trigger: TTGTTTATGGTGGCTATTCAACCAAGAGCCTGGAAG...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCTCGTTGGTAATATGTaGGATGACTCCCCCTTGTAC +
Preference number: 5 (lower is better)
Translates to: KRQLRLREVASVNLPKVTLVGNM*DDSPLY
Trigger: GTACAAGGGGGAGTCATCCAACATATTACCAACGAG...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTGCTTCGTCTGCAACCTaGGAGTGGCGAGGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVASSAT*EWRGEG
Trigger: CCCTTCTCCTCGCCACTCCAAGGTTGCAGACGAAGC...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTAAAATTTCCTAGTCCTTaGGCCTGGGTTGATGTTATG +
Preference number: 5 (lower is better)
Translates to: QLRLREVASVNLPKVTQLKFPSP*AWVDVM
Trigger: CATAACATCAACCCAGGCCAAAGGACTAGGAAATTT...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCGGGAATAGTCCAGCTTaGCTAAATCGACTATCAGGA +
Preference number: 5 (lower is better)
Translates to: KRQLRLREVASVNLPKVTGNSPA*LNRLSG
Trigger: TCCTGATAGTCGATTTAGCAAAGCTGGACTATTCCC...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGCAGGCTCACTGGTGCTaGTGTTTGCTATTGGCTCTA +
Preference number: 5 (lower is better)
Translates to: PCACGGSTSFHILQKRQLQAHWC*CLLLAL
Trigger: TAGAGCCAATAGCAAACACAAGCACCAGTGAGCCTG...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCTTCCAGGCTCTTGGTaGAATAGCCACCATAAACAA +
Preference number: 5 (lower is better)
Translates to: KRQLRLREVASVNLPKVTLPGSW*NSHHKQ
Trigger: TTGTTTATGGTGGCTATTCAACCAAGAGCCTGGAAG...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCGTTGCCTCTGTTAACTaGCCCAAGGTCACCCAGCTA +
Preference number: 5 (lower is better)
Translates to: KGLEYPQILGSSGVLEPIVASVN*PKVTQL
Trigger: TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAAC...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTAGCCTTAGACTTACCCTaGAGCATTCAGAGTCATAAT +
Preference number: 5 (lower is better)
Translates to: QLRLREVASVNLPKVTQLALDLP*SIQSHN
Trigger: ATTATGACTCTGAATGCTCAAGGGTAAGTCTAAGGC...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCGCTGTAGGCAAAGTCTaGGTCATATTGACTGCAATG +
Preference number: 5 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPAVGKV*VILTAM
Trigger: CATTGCAGTCAATATGACCAAGACTTTGCCTACAGC...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp GACCAGTTCTTCCCATCTACCATGTGGGGACACAGCAAGAAGGTACCATCTATGGGGAATAGTCCAGCTTaGCTAAATCGACTATCAGGA +
Preference number: 5 (lower is better)
Translates to: DQFFPSTMWGHSKKVPSMGNSPA*LNRLSG
Trigger: TCCTGATAGTCGATTTAGCAAAGCTGGACTATTCCC...CATAGATGGTACCTTCTTGCTGTGTCCCCACATGGTAGATGGGAAGAACTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGAACCACACTGTCGCCCTaGTCCAAGAGTTCCACCATT +
Preference number: 5 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARTTLSP*SKSSTI
Trigger: AATGGTGGAACTCTTGGACAAGGGCGACAGTGTGGT...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTATACTTCCATGTTGAATaGTGTTGCAAAGATAGCCAC +
Preference number: 5 (lower is better)
Translates to: QLRLREVASVNLPKVTQLYFHVE*CCKDSH
Trigger: GTGGCTATCTTTGCAACACAATTCAACATGGAAGTA...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp CAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCAGCTATATTCCAACAGGAATTaGTACCCTCTCTCGCTTTTT +
Preference number: 5 (lower is better)
Translates to: QLRLREVASVNLPKVTQLYSNRN*YPLSLF
Trigger: AAAAAGCGAGAGAGGGTACAAATTCCTGTTGGAATA...TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCTTGCTATTGGCTCTATaGATGGGCAGTGTAATTCAC +
Preference number: 5 (lower is better)
Translates to: KRQLRLREVASVNLPKVTLLLAL*MGSVIH
Trigger: GTGAATTACACTGCCCATCAATAGAGCCAATAGCAA...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCTGCTTGTGTTTGCTATaGGCTCTATTGATGGGCAGT +
Preference number: 5 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPCLCLL*ALLMGS
Trigger: ACTGCCCATCAATAGAGCCAATAGCAAACACAAGCA...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCCACTGGTGCTTGTGTTaGCTATTGGCTCTATTGATG +
Preference number: 5 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPHWCLC*LLALLM
Trigger: CATCAATAGAGCCAATAGCAAACACAAGCACCAGTG...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCCTTCCAGGCTCTTGGTaGAATAGCCACCATAAACAA +
Preference number: 5 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPLPGSW*NSHHKQ
Trigger: TTGTTTATGGTGGCTATTCAACCAAGAGCCTGGAAG...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCTTCCAGCAGAAGTCTTaGCACCACACCTTCTTTCTT +
Preference number: 5 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPFQQKS*HHTFFL
Trigger: AAGAAAGAAGGTGTGGTGCAAAGACTTCTGCTGGAA...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGAGTTGCCTCTGTTAACTaGCCCAAGGTCACCCAGCTA +
Preference number: 5 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARVASVN*PKVTQL
Trigger: TAGCTGGGTGACCTTGGGCAAGTTAACAGAGGCAAC...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGGAGTATCCTCAGATTTaGGGATCTTCAGGAGTCCTG +
Preference number: 5 (lower is better)
Translates to: PCACGGSTSFHILQKRQLEYPQI*GSSGVL
Trigger: CAGGACTCCTGAAGATCCCAAAATCTGAGGATACTC...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCGTTAGTGCCTTAATCTaGGACTTCACAGCCTCCAAA +
Preference number: 5 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPVSALI*DFTASK
Trigger: TTTGGAGGCTGTGAAGTCCAAGATTAAGGCACTAAC...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS GCA 90 bp AGGCCAATGATGAGAAGTAAACACAGCAACACATGTCGGGTCAGTTaGTGGTCTCCACTCTGTAGATACTGTTCTTCTTCCTGGGCTAAT +
Preference number: 5 (lower is better)
Translates to: RPMMRSKHSNTCRVS*WSPLCRYCSSSWAN
Trigger: ATTAGCCCAGGAAGAAGAACAGTATCTACAGAGTGGAGACCAGCAACTGACCCGACATGTGTTGCTGTGTTTACTTCTCATCATTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGGCTGTAGGCAAAGTCTaGGTCATATTGACTGCAATG +
Preference number: 5 (lower is better)
Translates to: PCACGGSTSFHILQKRQLAVGKV*VILTAM
Trigger: CATTGCAGTCAATATGACCAAGACTTTGCCTACAGC...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCTACTTCCATGTTGAATaGTGTTGCAAAGATAGCCAC +
Preference number: 5 (lower is better)
Translates to: KRQLRLREVASVNLPKVTYFHVE*CCKDSH
Trigger: GTGGCTATCTTTGCAACACAATTCAACATGGAAGTA...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCAAAGAAACAAAGAAATaGCTAGAAGGCCTGTCCACA +
Preference number: 5 (lower is better)
Translates to: KRQLRLREVASVNLPKVTKETKK*LEGLST
Trigger: TGTGGACAGGCCTTCTAGCAATTTCTTTGTTTCTTT...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGACAGGCTCACTGGTGCTaGTGTTTGCTATTGGCTCTA +
Preference number: 5 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARQAHWC*CLLLAL
Trigger: TAGAGCCAATAGCAAACACAAGCACCAGTGAGCCTG...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGTTCCAGCAGAAGTCTTaGCACCACACCTTCTTTCTT +
Preference number: 5 (lower is better)
Translates to: PCACGGSTSFHILQKRQLFQQKS*HHTFFL
Trigger: AAGAAAGAAGGTGTGGTGCAAAGACTTCTGCTGGAA...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp AAGAGACAACTGAGGCTCAGAGAGGTTGCCTCTGTTAACTTGCCCAAGGTCACCCGGAATTCATACTCGTaGGTAATATGTTGGATGACT +
Preference number: 5 (lower is better)
Translates to: KRQLRLREVASVNLPKVTRNSYS*VICWMT
Trigger: AGTCATCCAACATATTACCAACGAGTATGAATTCCG...GGTGACCTTGGGCAAGTTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS TCA 90 bp ATCTGGAGACAAAATTTCCTAGTCCTTTGGCCTGGGTTGATGTTATaGCATTGGCCCTTCCTGCTATGTAGCCACAAAGGACAATGCCAA +
Preference number: 5 (lower is better)
Translates to: IWRQNFLVLWPGLML*HWPFLLCSHKGQCQ
Trigger: TTGGCATTGTCCTTTGTGGCTACATAGCAGGAAGGGCCAATGTCATAACATCAACCCAGGCCAAAGGACTAGGAAATTTTGTCTCCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS GCA 90 bp GCTGGTCTCCACTCTGTAGATACTGTTCTTCTTCCTGGGCTAATATaGAGCTCTGGGAGTTACAGCGACTCACACAATGATTGTTTTTCT +
Preference number: 5 (lower is better)
Translates to: AGLHSVDTVLLPGLI*SSGSYSDSHNDCFS
Trigger: AGAAAAACAATCATTGTGTGAGTCGCTGTAACTCCCAGAGCTGCATATTAGCCCAGGAAGAAGAACAGTATCTACAGAGTGGAGACCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS CCA 90 bp CCAATGATGAGAAGTAAACACAGCAACACATGTCGGGTCAGTTGCTaGTCTCCACTCTGTAGATACTGTTCTTCTTCCTGGGCTAATATG +
Preference number: 5 (lower is better)
Translates to: PMMRSKHSNTCRVSC*SPLCRYCSSSWANM
Trigger: CATATTAGCCCAGGAAGAAGAACAGTATCTACAGAGTGGAGACCAGCAACTGACCCGACATGTGTTGCTGTGTTTACTTCTCATCATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCGCTGTAGGCAAAGTCTaGGTCATATTGACTGCAATG +
Preference number: 5 (lower is better)
Translates to: KGLEYPQILGSSGVLEPIAVGKV*VILTAM
Trigger: CATTGCAGTCAATATGACCAAGACTTTGCCTACAGC...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGAAATTTCCTAGTCCTTaGGCCTGGGTTGATGTTATG +
Preference number: 5 (lower is better)
Translates to: PCACGGSTSFHILQKRQLKFPSP*AWVDVM
Trigger: CATAACATCAACCCAGGCCAAAGGACTAGGAAATTT...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCGGGAATAGTCCAGCTTaGCTAAATCGACTATCAGGA +
Preference number: 5 (lower is better)
Translates to: KGLEYPQILGSSGVLEPIGNSPA*LNRLSG
Trigger: TCCTGATAGTCGATTTAGCAAAGCTGGACTATTCCC...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCCGATCAAGAATAAAATaGAAGGCGATGCCAATGAAG +
Preference number: 5 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPRSRIK*KAMPMK
Trigger: CTTCATTGGCATCGCCTTCAATTTTATTCTTGATCG...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTACCACACTGTCGCCCTaGTCCAAGAGTTCCACCATT +
Preference number: 5 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVTTLSP*SKSSTI
Trigger: AATGGTGGAACTCTTGGACAAGGGCGACAGTGTGGT...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp GACCAGTTCTTCCCATCTACCATGTGGGGACACAGCAAGAAGGTACCATCTATGTATTCCAACAGGAATTaGTACCCTCTCTCGCTTTTT +
Preference number: 5 (lower is better)
Translates to: DQFFPSTMWGHSKKVPSMYSNRN*YPLSLF
Trigger: AAAAAGCGAGAGAGGGTACAAATTCCTGTTGGAATA...CATAGATGGTACCTTCTTGCTGTGTCCCCACATGGTAGATGGGAAGAACTGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCTGCTTGTGTTTGCTATaGGCTCTATTGATGGGCAGT +
Preference number: 5 (lower is better)
Translates to: KGLEYPQILGSSGVLEPICLCLL*ALLMGS
Trigger: ACTGCCCATCAATAGAGCCAATAGCAAACACAAGCA...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCACTGGTGCTTGTGTTaGCTATTGGCTCTATTGATG +
Preference number: 5 (lower is better)
Translates to: KGLEYPQILGSSGVLEPIHWCLC*LLALLM
Trigger: CATCAATAGAGCCAATAGCAAACACAAGCACCAGTG...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGAGAGTATCCTCAGATTTaGGGATCTTCAGGAGTCCTG +
Preference number: 5 (lower is better)
Translates to: SVNLPKVTQLKTNEYAAREYPQI*GSSGVL
Trigger: CAGGACTCCTGAAGATCCCAAAATCTGAGGATACTC...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTTGCAGTGATGTGATCTaGGTTCACTGCAACCTGCGC +
Preference number: 5 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVCSDVI*VHCNLR
Trigger: GCGCAGGTTGCAGTGAACCAAGATCACATCACTGCA...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCAAATTTCCTAGTCCTTaGGCCTGGGTTGATGTTATG +
Preference number: 5 (lower is better)
Translates to: KGLEYPQILGSSGVLEPIKFPSP*AWVDVM
Trigger: CATAACATCAACCCAGGCCAAAGGACTAGGAAATTT...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGCGATCAAGAATAAAATaGAAGGCGATGCCAATGAAG +
Preference number: 5 (lower is better)
Translates to: PCACGGSTSFHILQKRQLRSRIK*KAMPMK
Trigger: CTTCATTGGCATCGCCTTCAATTTTATTCTTGATCG...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCTTGCTATTGGCTCTATaGATGGGCAGTGTAATTCAC +
Preference number: 5 (lower is better)
Translates to: KGLEYPQILGSSGVLEPILLLAL*MGSVIH
Trigger: GTGAATTACACTGCCCATCAATAGAGCCAATAGCAA...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGACACTGGTGCTTGTGTTaGCTATTGGCTCTATTGATG +
Preference number: 5 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARHWCLC*LLALLM
Trigger: CATCAATAGAGCCAATAGCAAACACAAGCACCAGTG...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCTCTGCTGTGTCTTTATaGTTCCATAGGAATTCAAGT +
Preference number: 5 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPSAVSL*FHRNSS
Trigger: ACTTGAATTCCTATGGAACAATAAAGACACAGCAGA...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp GACCAGTTCTTCCCATCTACCATGTGGGGACACAGCAAGAAGGTACCATCTATGTCTGCTGTGTCTTTATaGTTCCATAGGAATTCAAGT +
Preference number: 5 (lower is better)
Translates to: DQFFPSTMWGHSKKVPSMSAVSL*FHRNSS
Trigger: ACTTGAATTCCTATGGAACAATAAAGACACAGCAGA...CATAGATGGTACCTTCTTGCTGTGTCCCCACATGGTAGATGGGAAGAACTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGATTCCAGCAGAAGTCTTaGCACCACACCTTCTTTCTT +
Preference number: 5 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARFQQKS*HHTFFL
Trigger: AAGAAAGAAGGTGTGGTGCAAAGACTTCTGCTGGAA...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTTTGGATGACTCCCCCTaGTACCAGCCTGTCTCCGTA +
Preference number: 5 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLLDDSP*YQPVSV
Trigger: TACGGAGACAGGCTGGTACAAGGGGGAGTCATCCAA...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGCGGAATTCATACTCGTaGGTAATATGTTGGATGACT +
Preference number: 5 (lower is better)
Translates to: PCACGGSTSFHILQKRQLRNSYS*VICWMT
Trigger: AGTCATCCAACATATTACCAACGAGTATGAATTCCG...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp GGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCCCCCTGCATTACGATGCTTaGTTCAAACACAGAAATGAT +
Preference number: 5 (lower is better)
Translates to: GLEYPQILGSSGVLEPIPLHYDA*FKHRND
Trigger: ATCATTTCTGTGTTTGAACAAAGCATCGTAATGCAG...GGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS CCA 90 bp TTCTGGAATAGAGCTTGTAAAAAGTTCTGGTTCATTTACTGGTGCTaGACTCTCCTCAAAAGCAGTATTTCCAGGCTCCACCACTTTGTG +
Preference number: 5 (lower is better)
Translates to: FWNRACKKFWFIYWC*TLLKSSISRLHHFV
Trigger: CACAAAGTGGTGGAGCCTGGAAATACTGCTTTTGAGGAGAGTCCAGCACCAGTAAATGAACCAGAACTTTTTACAAGCTCTATTCCAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS CCA 90 bp ACTTGTTTCTGGAATAGAGCTTGTAAAAAGTTCTGGTTCATTTACTaGTGCTGGACTCTCCTCAAAAGCAGTATTTCCAGGCTCCACCAC +
Preference number: 5 (lower is better)
Translates to: TCFWNRACKKFWFIY*CWTLLKSSISRLHH
Trigger: GTGGTGGAGCCTGGAAATACTGCTTTTGAGGAGAGTCCAGCACCAGTAAATGAACCAGAACTTTTTACAAGCTCTATTCCAGAAACAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTTGTGCCACAGGGACTTaGCACATTCAGTTCACTCAA +
Preference number: 5 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVCATGT*HIQFTQ
Trigger: TTGAGTGAACTGAATGTGCAAAGTCCCTGTGGCACA...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295500.8
CDS-3UTR CAA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTACCACACTGTCGCCCTaGTCCAAGAGTTCCACCATT +
Preference number: 5 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLTTLSP*SKSSTI
Trigger: AATGGTGGAACTCTTGGACAAGGGCGACAGTGTGGT...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp AAGGGACTTGAGTATCCTCAGATTTTGGGATCTTCAGGAGTCCTGGAACCAATCAAAGAAACAAAGAAATaGCTAGAAGGCCTGTCCACA +
Preference number: 5 (lower is better)
Translates to: KGLEYPQILGSSGVLEPIKETKK*LEGLST
Trigger: TGTGGACAGGCCTTCTAGCAATTTCTTTGTTTCTTT...GATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAAGTCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGATTGCTATTGGCTCTATaGATGGGCAGTGTAATTCAC +
Preference number: 5 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARLLLAL*MGSVIH
Trigger: GTGAATTACACTGCCCATCAATAGAGCCAATAGCAA...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGTCTGCTGTGTCTTTATaGTTCCATAGGAATTCAAGT +
Preference number: 5 (lower is better)
Translates to: PCACGGSTSFHILQKRQLSAVSL*FHRNSS
Trigger: ACTTGAATTCCTATGGAACAATAAAGACACAGCAGA...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGCTGCATTACGATGCTTaGTTCAAACACAGAAATGAT +
Preference number: 5 (lower is better)
Translates to: PCACGGSTSFHILQKRQLLHYDA*FKHRND
Trigger: ATCATTTCTGTGTTTGAACAAAGCATCGTAATGCAG...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp CCCTGCGCATGTGGTGGGAGCACATCTTTTCACATTTTACAGAAGAGACAACTGAAACAAATTCTCCACTaGAGTTTCAGTTGTCTGCAT +
Preference number: 5 (lower is better)
Translates to: PCACGGSTSFHILQKRQLKQILH*SFSCLH
Trigger: ATGCAGACAACTGAAACTCAAGTGGAGAATTTGTTT...CAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS GCA 90 bp ACTTTGCACATTCAGTTCACTCAAGTGTCACGGAAGCAGGGACTATaGATGTTTTTGCTCAATGTTGTGTCCTTAACATCTAGGACAGTA +
Preference number: 5 (lower is better)
Translates to: TLHIQFTQVSRKQGL*MFLLNVVSLTSRTV
Trigger: TACTGTCCTAGATGTTAAGGACACAACATTGAGCAAAAACATGCATAGTCCCTGCTTCCGTGACACTTGAGTGAACTGAATGTGCAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295500.8
ENST00000497620.1
CDS GCA 90 bp TGTTTCTGGAATAGAGCTTGTAAAAAGTTCTGGTTCATTTACTGGTaGTGGACTCTCCTCAAAAGCAGTATTTCCAGGCTCCACCACTTT +
Preference number: 5 (lower is better)
Translates to: CFWNRACKKFWFIYW*WTLLKSSISRLHHF
Trigger: AAAGTGGTGGAGCCTGGAAATACTGCTTTTGAGGAGAGTCCAGCACCAGTAAATGAACCAGAACTTTTTACAAGCTCTATTCCAGAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS GCA 90 bp ATTTTCTCTCACCCTCCAACTCCAACCAGATCTCACATGGGAACTTaGGATTATTCCACTGAAGTCTTTATAATCACATCTGCTTCGTCT +
Preference number: 5 (lower is better)
Translates to: IFSHPPTPTRSHMGT*DYSTEVFIITSASS
Trigger: AGACGAAGCAGATGTGATTATAAAGACTTCAGTGGAATAATCGCAAGTTCCCATGTGAGATCTGGTTGGAGTTGGAGGGTGAGAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392551.6
CDS-3UTR CAA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTCACTGGTGCTTGTGTTaGCTATTGGCTCTATTGATG +
Preference number: 5 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVHWCLC*LLALLM
Trigger: CATCAATAGAGCCAATAGCAAACACAAGCACCAGTG...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTCAGGCTCACTGGTGCTaGTGTTTGCTATTGGCTCTA +
Preference number: 5 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLQAHWC*CLLLAL
Trigger: TAGAGCCAATAGCAAACACAAGCACCAGTGAGCCTG...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp TTTTCACAGGAGAATAGAAGCTCCATGAGGATAGGAATCATATTTGTTCCAACTCAGGCTCACTGGTGCTaGTGTTTGCTATTGGCTCTA +
Preference number: 5 (lower is better)
Translates to: FSQENRSSMRIGIIFVPTQAHWC*CLLLAL
Trigger: TAGAGCCAATAGCAAACACAAGCACCAGTGAGCCTG...AGTTGGAACAAATATGATTCCTATCCTCATGGAGCTTCTATTCTCCTGTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGACGGAATTCATACTCGTaGGTAATATGTTGGATGACT +
Preference number: 5 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARRNSYS*VICWMT
Trigger: AGTCATCCAACATATTACCAACGAGTATGAATTCCG...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS CCA 90 bp TCACACAATGATTGTTTTTCTCAAACGAAGGAATCACAGGCTCACTaGTGCTTGTGTTTGCTATTGGCTCTATTGATGGGCAGTGTAATT +
Preference number: 5 (lower is better)
Translates to: SHNDCFSQTKESQAH*CLCLLLALLMGSVI
Trigger: AATTACACTGCCCATCAATAGAGCCAATAGCAAACACAAGCACCAGTGAGCCTGTGATTCCTTCGTTTGAGAAAAACAATCATTGTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGAAAAGTCTTGGTCATATaGACTGCAATGGTTAAGTTC +
Preference number: 5 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARKVLVI*TAMVKF
Trigger: GAACTTAACCATTGCAGTCAATATGACCAAGACTTT...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTAAATTTCCTAGTCCTTaGGCCTGGGTTGATGTTATG +
Preference number: 5 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVKFPSP*AWVDVM
Trigger: CATAACATCAACCCAGGCCAAAGGACTAGGAAATTT...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTCTCGTTGGTAATATGTaGGATGACTCCCCCTTGTAC +
Preference number: 5 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLLVGNM*DDSPLY
Trigger: GTACAAGGGGGAGTCATCCAACATATTACCAACGAG...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp TCTGTTAACTTGCCCAAGGTCACCCAGCTAAAAACTAATGAATACGCGGCTAGAAAACAAATTCTCCACTaGAGTTTCAGTTGTCTGCAT +
Preference number: 5 (lower is better)
Translates to: SVNLPKVTQLKTNEYAARKQILH*SFSCLH
Trigger: ATGCAGACAACTGAAACTCAAGTGGAGAATTTGTTT...TCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAGTTAACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS GCA 90 bp CTTGTAATTGACATTGAAGGTGGGTCATTAGTGGAATTAAATCCATaGGTTACTGCTGTAGGCAAAGTCTTGGTCATATTGACTGCAATG +
Preference number: 5 (lower is better)
Translates to: LVIDIEGGSLVELNP*VTAVGKVLVILTAM
Trigger: CATTGCAGTCAATATGACCAAGACTTTGCCTACAGCAGTAACGCATGGATTTAATTCCACTAATGACCCACCTTCAATGTCAATTACAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTGCTGTAGGCAAAGTCTaGGTCATATTGACTGCAATG +
Preference number: 5 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLAVGKV*VILTAM
Trigger: CATTGCAGTCAATATGACCAAGACTTTGCCTACAGC...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTCGATCAAGAATAAAATaGAAGGCGATGCCAATGAAG +
Preference number: 5 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVRSRIK*KAMPMK
Trigger: CTTCATTGGCATCGCCTTCAATTTTATTCTTGATCG...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTTACTTCCATGTTGAATaGTGTTGCAAAGATAGCCAC +
Preference number: 5 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVYFHVE*CCKDSH
Trigger: GTGGCTATCTTTGCAACACAATTCAACATGGAAGTA...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTTGCTTGTGTTTGCTATaGGCTCTATTGATGGGCAGT +
Preference number: 5 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLCLCLL*ALLMGS
Trigger: ACTGCCCATCAATAGAGCCAATAGCAAACACAAGCA...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp TTTTCACAGGAGAATAGAAGCTCCATGAGGATAGGAATCATATTTGTTCCAACTCTTCCAGGCTCTTGGTaGAATAGCCACCATAAACAA +
Preference number: 5 (lower is better)
Translates to: FSQENRSSMRIGIIFVPTLPGSW*NSHHKQ
Trigger: TTGTTTATGGTGGCTATTCAACCAAGAGCCTGGAAG...AGTTGGAACAAATATGATTCCTATCCTCATGGAGCTTCTATTCTCCTGTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTTTCCAGCAGAAGTCTTaGCACCACACCTTCTTTCTT +
Preference number: 5 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLFQQKS*HHTFFL
Trigger: AAGAAAGAAGGTGTGGTGCAAAGACTTCTGCTGGAA...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTAAGTTAAAGATCAGATaGTACTTCTGCAGGACTGTG +
Preference number: 5 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVKLKIR*YFCRTV
Trigger: CACAGTCCTGCAGAAGTACAATCTGATCTTTAACTT...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTGTTAGTGCCTTAATCTaGGACTTCACAGCCTCCAAA +
Preference number: 5 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLVSALI*DFTASK
Trigger: TTTGGAGGCTGTGAAGTCCAAGATTAAGGCACTAAC...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp GATGTAGTCAGGCTTAACAATGGTTGCATCTGTAGTGAACATGTACAGACTGTTAAAGTCTTGGTCATATaGACTGCAATGGTTAAGTTC +
Preference number: 5 (lower is better)
Translates to: DVVRLNNGCICSEHVQTVKVLVI*TAMVKF
Trigger: GAACTTAACCATTGCAGTCAATATGACCAAGACTTT...AACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp TTTTCACAGGAGAATAGAAGCTCCATGAGGATAGGAATCATATTTGTTCCAACTTTGCTATTGGCTCTATaGATGGGCAGTGTAATTCAC +
Preference number: 5 (lower is better)
Translates to: FSQENRSSMRIGIIFVPTLLLAL*MGSVIH
Trigger: GTGAATTACACTGCCCATCAATAGAGCCAATAGCAA...AGTTGGAACAAATATGATTCCTATCCTCATGGAGCTTCTATTCTCCTGTGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTCGATCAAGAATAAAATaGAAGGCGATGCCAATGAAG +
Preference number: 5 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLRSRIK*KAMPMK
Trigger: CTTCATTGGCATCGCCTTCAATTTTATTCTTGATCG...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTTACTTCCATGTTGAATaGTGTTGCAAAGATAGCCAC +
Preference number: 5 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLYFHVE*CCKDSH
Trigger: GTGGCTATCTTTGCAACACAATTCAACATGGAAGTA...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp TTTTCACAGGAGAATAGAAGCTCCATGAGGATAGGAATCATATTTGTTCCAACTAAAGAAACAAAGAAATaGCTAGAAGGCCTGTCCACA +
Preference number: 5 (lower is better)
Translates to: FSQENRSSMRIGIIFVPTKETKK*LEGLST
Trigger: TGTGGACAGGCCTTCTAGCAATTTCTTTGTTTCTTT...AGTTGGAACAAATATGATTCCTATCCTCATGGAGCTTCTATTCTCCTGTGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTTATTCCAACAGGAATTaGTACCCTCTCTCGCTTTTT +
Preference number: 5 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLYSNRN*YPLSLF
Trigger: AAAAAGCGAGAGAGGGTACAAATTCCTGTTGGAATA...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTCGGAATTCATACTCGTaGGTAATATGTTGGATGACT +
Preference number: 5 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLRNSYS*VICWMT
Trigger: AGTCATCCAACATATTACCAACGAGTATGAATTCCG...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp TTCTGCAGGACTGTGGAGATAATAATACATATGGAGGTTCTTATTCCTTTCCTTAAGTTAAAGATCAGATaGTACTTCTGCAGGACTGTG +
Preference number: 5 (lower is better)
Translates to: FCRTVEIIIHMEVLIPFLKLKIR*YFCRTV
Trigger: CACAGTCCTGCAGAAGTACAATCTGATCTTTAACTT...AAGGAAAGGAATAAGAACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp TTTTCACAGGAGAATAGAAGCTCCATGAGGATAGGAATCATATTTGTTCCAACTAAAGTCTTGGTCATATaGACTGCAATGGTTAAGTTC +
Preference number: 5 (lower is better)
Translates to: FSQENRSSMRIGIIFVPTKVLVI*TAMVKF
Trigger: GAACTTAACCATTGCAGTCAATATGACCAAGACTTT...AGTTGGAACAAATATGATTCCTATCCTCATGGAGCTTCTATTCTCCTGTGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS-3UTR CAA 90 bp TTTTCACAGGAGAATAGAAGCTCCATGAGGATAGGAATCATATTTGTTCCAACTCTGCATTACGATGCTTaGTTCAAACACAGAAATGAT +
Preference number: 5 (lower is better)
Translates to: FSQENRSSMRIGIIFVPTLHYDA*FKHRND
Trigger: ATCATTTCTGTGTTTGAACAAAGCATCGTAATGCAG...AGTTGGAACAAATATGATTCCTATCCTCATGGAGCTTCTATTCTCCTGTGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392552.7
ENST00000614352.4
CDS GCA 72 bp TCCCGCCCCCAGCCCTCTTCGCCGAGCGCAACCGGGTaGCAGCTGCAGCAGCTTAGGCACGTTCCGATAAAG +
Preference number: 6 (lower is better)
Translates to: SRPQPSSPSATG*QLQQLRHVPIK
Trigger: CTTTATCGGAACGTGCCTAAGCTGCTGCAGCTGGCACCCGGTTGCGCTCGGCGAAGAGGGCTGGGGGCGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS CCA 72 bp TCGTCTGCAACCTTGGAGTGGCGAGGAGAAGGGAGCTaGTGCTCGCAGGGTGCCAAGCAGGGAGAAGACCAC +
Preference number: 6 (lower is better)
Translates to: SSATLEWRGEGS*CSQGAKQGEDH
Trigger: GTGGTCTTCTCCCTGCTTGGCACCCTGCGAGCACCAGCTCCCTTCTCCTCGCCACTCCAAGGTTGCAGACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000497620.1
ENST00000614352.4
CDS CAA 90 bp GTTGTGTCCTTAACATCTAGGACAGTACCTGCTTCGTCTGCAACCTaGGAGTGGCGAGGAGAAGGGAGCTGGTGCTCGCAGGGTGCCAAG +
Preference number: 6 (lower is better)
Translates to: VVSLTSRTVPASSAT*EWRGEGSWCSQGAK
Trigger: CTTGGCACCCTGCGAGCACCAGCTCCCTTCTCCTCGCCACTCCAAGGTTGCAGACGAAGCAGGTACTGTCCTAGATGTTAAGGACACAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295500.8
ENST00000497620.1
CDS CAA 90 bp ACCCGCCACACACACTGGCCCCAGGGACTTTGTGCCACAGGGACTTaGCACATTCAGTTCACTCAAGTGTCACGGAAGCAGGGACTATGC +
Preference number: 6 (lower is better)
Translates to: TRHTHWPQGLCATGT*HIQFTQVSRKQGLC
Trigger: GCATAGTCCCTGCTTCCGTGACACTTGAGTGAACTGAATGTGCAAAGTCCCTGTGGCACAAAGTCCCTGGGGCCAGTGTGTGTGGCGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295500.8
ENST00000497620.1
CDS CAA 72 bp CTTCTACACCCGCCACACACACTGGCCCCAGGGACTTaGTGCCACAGGGACTTTGCACATTCAGTTCACTCA +
Preference number: 6 (lower is better)
Translates to: LLHPPHTLAPGT*CHRDFAHSVHS
Trigger: TGAGTGAACTGAATGTGCAAAGTCCCTGTGGCACAAAGTCCCTGGGGCCAGTGTGTGTGGCGGGTGTAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295500.8
ENST00000497620.1
CDS CAA 72 bp ACACACTGGCCCCAGGGACTTTGTGCCACAGGGACTTaGCACATTCAGTTCACTCAAGTGTCACGGAAGCAG +
Preference number: 6 (lower is better)
Translates to: THWPQGLCATGT*HIQFTQVSRKQ
Trigger: CTGCTTCCGTGACACTTGAGTGAACTGAATGTGCAAAGTCCCTGTGGCACAAAGTCCCTGGGGCCAGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295500.8
ENST00000497620.1
CDS CAA 90 bp TATTCCACTGAAGTCTTTATAATCACATCTGCTTCGTCTGCAACCTaGGAGTGGCGAGGAGAAGGGAGCTGGTGCTCGCAGGGTGCCAAG +
Preference number: 6 (lower is better)
Translates to: YSTEVFIITSASSAT*EWRGEGSWCSQGAK
Trigger: CTTGGCACCCTGCGAGCACCAGCTCCCTTCTCCTCGCCACTCCAAGGTTGCAGACGAAGCAGATGTGATTATAAAGACTTCAGTGGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392551.6
CDS TCA 72 bp CATAGCTTCCTGCTTGGGCAGTCTGGTTCATGCACATaGGGGATATGCCAGCTATCAGGATGCTGCAGAACA +
Preference number: 6 (lower is better)
Translates to: HSFLLGQSGSCT*GICQLSGCCRT
Trigger: TGTTCTGCAGCATCCTGATAGCTGGCATATCCCTCATGTGCATGAACCAGACTGCCCAAGCAGGAAGCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS CAA 90 bp CACTTTGTGGCTCTGAGACTGATCGAAACCTTCATAGCTTCCTGCTaGGGCAGTCTGGTTCATGCACATGAGGGATATGCCAGCTATCAG +
Preference number: 6 (lower is better)
Translates to: HFVALRLIETFIASC*GSLVHAHEGYASYQ
Trigger: CTGATAGCTGGCATATCCCTCATGTGCATGAACCAGACTGCCCAAGCAGGAAGCTATGAAGGTTTCGATCAGTCTCAGAGCCACAAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS CAA 90 bp ATCCCGGAATTCATACTCGTTGGTAATATGTTGGATGACTCCCCCTaGTACCAGCCTGTCTCCGTATATCACAGCTTCACCACGGTCGGA +
Preference number: 6 (lower is better)
Translates to: IPEFILVGNMLDDSP*YQPVSVYHSFTTVG
Trigger: TCCGACCGTGGTGAAGCTGTGATATACGGAGACAGGCTGGTACAAGGGGGAGTCATCCAACATATTACCAACGAGTATGAATTCCGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS GCA 72 bp GTGGCTCTGAGACTGATCGAAACCTTCATAGCTTCCTaGTTGGGCAGTCTGGTTCATGCACATGAGGGATAT +
Preference number: 6 (lower is better)
Translates to: VALRLIETFIAS*LGSLVHAHEGY
Trigger: ATATCCCTCATGTGCATGAACCAGACTGCCCAAGCAGGAAGCTATGAAGGTTTCGATCAGTCTCAGAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS CCA 72 bp TGCTGGTCTCCACTCTGTAGATACTGTTCTTCTTCCTaGGCTAATATGCAGCTCTGGGAGTTACAGCGACTC +
Preference number: 6 (lower is better)
Translates to: CWSPLCRYCSSS*ANMQLWELQRL
Trigger: GAGTCGCTGTAACTCCCAGAGCTGCATATTAGCCCAGGAAGAAGAACAGTATCTACAGAGTGGAGACCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS CAA 72 bp CAGGCTCACTGGTGCTTGTGTTTGCTATTGGCTCTATaGATGGGCAGTGTAATTCACCATTTCCCATGGAGC +
Preference number: 6 (lower is better)
Translates to: QAHWCLCLLLAL*MGSVIHHFPWS
Trigger: GCTCCATGGGAAATGGTGAATTACACTGCCCATCAATAGAGCCAATAGCAAACACAAGCACCAGTGAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS CAA 72 bp GTACTCATCCCGGAATTCATACTCGTTGGTAATATGTaGGATGACTCCCCCTTGTACCAGCCTGTCTCCGTA +
Preference number: 6 (lower is better)
Translates to: VLIPEFILVGNM*DDSPLYQPVSV
Trigger: TACGGAGACAGGCTGGTACAAGGGGGAGTCATCCAACATATTACCAACGAGTATGAATTCCGGGATGAGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS CAA 90 bp TCTCAAACGAAGGAATCACAGGCTCACTGGTGCTTGTGTTTGCTATaGGCTCTATTGATGGGCAGTGTAATTCACCATTTCCCATGGAGC +
Preference number: 6 (lower is better)
Translates to: SQTKESQAHWCLCLL*ALLMGSVIHHFPWS
Trigger: GCTCCATGGGAAATGGTGAATTACACTGCCCATCAATAGAGCCAATAGCAAACACAAGCACCAGTGAGCCTGTGATTCCTTCGTTTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS CCA 72 bp AGAAGTAAACACAGCAACACATGTCGGGTCAGTTGCTaGTCTCCACTCTGTAGATACTGTTCTTCTTCCTGG +
Preference number: 6 (lower is better)
Translates to: RSKHSNTCRVSC*SPLCRYCSSSW
Trigger: CCAGGAAGAAGAACAGTATCTACAGAGTGGAGACCAGCAACTGACCCGACATGTGTTGCTGTGTTTACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS CCA 72 bp TACTCATCCCGGAATTCATACTCGTTGGTAATATGTTaGATGACTCCCCCTTGTACCAGCCTGTCTCCGTAT +
Preference number: 6 (lower is better)
Translates to: YSSRNSYSLVIC*MTPPCTSLSPY
Trigger: ATACGGAGACAGGCTGGTACAAGGGGGAGTCATCCAACATATTACCAACGAGTATGAATTCCGGGATGAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS CAA 72 bp TTCATACTCGTTGGTAATATGTTGGATGACTCCCCCTaGTACCAGCCTGTCTCCGTATATCACAGCTTCACC +
Preference number: 6 (lower is better)
Translates to: FILVGNMLDDSP*YQPVSVYHSFT
Trigger: GGTGAAGCTGTGATATACGGAGACAGGCTGGTACAAGGGGGAGTCATCCAACATATTACCAACGAGTATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS CAA 90 bp GTAAAACAAGTACTCATCCCGGAATTCATACTCGTTGGTAATATGTaGGATGACTCCCCCTTGTACCAGCCTGTCTCCGTATATCACAGC +
Preference number: 6 (lower is better)
Translates to: VKQVLIPEFILVGNM*DDSPLYQPVSVYHS
Trigger: GCTGTGATATACGGAGACAGGCTGGTACAAGGGGGAGTCATCCAACATATTACCAACGAGTATGAATTCCGGGATGAGTACTTGTTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS TCA 72 bp CAAAATTTCCTAGTCCTTTGGCCTGGGTTGATGTTATaGCATTGGCCCTTCCTGCTATGTAGCCACAAAGGA +
Preference number: 6 (lower is better)
Translates to: QNFLVLWPGLML*HWPFLLCSHKG
Trigger: TCCTTTGTGGCTACATAGCAGGAAGGGCCAATGTCATAACATCAACCCAGGCCAAAGGACTAGGAAATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS GCA 72 bp CACTCTGTAGATACTGTTCTTCTTCCTGGGCTAATATaGAGCTCTGGGAGTTACAGCGACTCACACAATGAT +
Preference number: 6 (lower is better)
Translates to: HSVDTVLLPGLI*SSGSYSDSHND
Trigger: ATCATTGTGTGAGTCGCTGTAACTCCCAGAGCTGCATATTAGCCCAGGAAGAAGAACAGTATCTACAGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS GCA 72 bp ATGAGAAGTAAACACAGCAACACATGTCGGGTCAGTTaGTGGTCTCCACTCTGTAGATACTGTTCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: MRSKHSNTCRVS*WSPLCRYCSSS
Trigger: GGAAGAAGAACAGTATCTACAGAGTGGAGACCAGCAACTGACCCGACATGTGTTGCTGTGTTTACTTCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS CCA 72 bp CTTGTCCAAGAGTTCCACCATTTCTCTGCACAGAAGTaGCAGCACCAGAAGTTTAGCTGTGATGAGAAGAAT +
Preference number: 6 (lower is better)
Translates to: LVQEFHHFSAQK*QHQKFSCDEKN
Trigger: ATTCTTCTCATCACAGCTAAACTTCTGGTGCTGCCACTTCTGTGCAGAGAAATGGTGGAACTCTTGGACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS CAA 72 bp GGAAGTGCAAATCTGGAGACAAAATTTCCTAGTCCTTaGGCCTGGGTTGATGTTATGACATTGGCCCTTCCT +
Preference number: 6 (lower is better)
Translates to: GSANLETKFPSP*AWVDVMTLALP
Trigger: AGGAAGGGCCAATGTCATAACATCAACCCAGGCCAAAGGACTAGGAAATTTTGTCTCCAGATTTGCACTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS CAA 72 bp CAAACGAAGGAATCACAGGCTCACTGGTGCTTGTGTTaGCTATTGGCTCTATTGATGGGCAGTGTAATTCAC +
Preference number: 6 (lower is better)
Translates to: QTKESQAHWCLC*LLALLMGSVIH
Trigger: GTGAATTACACTGCCCATCAATAGAGCCAATAGCAAACACAAGCACCAGTGAGCCTGTGATTCCTTCGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS TCA 72 bp CAACAAGGAGAGCAGGAATTCCCCAGCCAGATATTATaGTTATTCCAACAGGAATTTGTACCCTCTCTCGCT +
Preference number: 6 (lower is better)
Translates to: QQGEQEFPSQIL*LFQQEFVPSLA
Trigger: AGCGAGAGAGGGTACAAATTCCTGTTGGAATAATCATAATATCTGGCTGGGGAATTCCTGCTCTCCTTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS GCA 72 bp TATGCCAGCTATCAGGATGCTGCAGAACAGGGTGACTaGTGTGGTGATCATCTGTTCTTTTCCATAAAAGAA +
Preference number: 6 (lower is better)
Translates to: YASYQDAAEQGD*CGDHLFFSIKE
Trigger: TTCTTTTATGGAAAAGAACAGATGATCACCACAGCAGTCACCCTGTTCTGCAGCATCCTGATAGCTGGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS CCA 72 bp AGAGCTTGTAAAAAGTTCTGGTTCATTTACTGGTGCTaGACTCTCCTCAAAAGCAGTATTTCCAGGCTCCAC +
Preference number: 6 (lower is better)
Translates to: RACKKFWFIYWC*TLLKSSISRLH
Trigger: GTGGAGCCTGGAAATACTGCTTTTGAGGAGAGTCCAGCACCAGTAAATGAACCAGAACTTTTTACAAGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS CCA 72 bp GATTGTTTTTCTCAAACGAAGGAATCACAGGCTCACTaGTGCTTGTGTTTGCTATTGGCTCTATTGATGGGC +
Preference number: 6 (lower is better)
Translates to: DCFSQTKESQAH*CLCLLLALLMG
Trigger: GCCCATCAATAGAGCCAATAGCAAACACAAGCACCAGTGAGCCTGTGATTCCTTCGTTTGAGAAAAACAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS CAA 72 bp AAGGAATCACAGGCTCACTGGTGCTTGTGTTTGCTATaGGCTCTATTGATGGGCAGTGTAATTCACCATTTC +
Preference number: 6 (lower is better)
Translates to: KESQAHWCLCLL*ALLMGSVIHHF
Trigger: GAAATGGTGAATTACACTGCCCATCAATAGAGCCAATAGCAAACACAAGCACCAGTGAGCCTGTGATTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS CAA 72 bp TTTTCTCAAACGAAGGAATCACAGGCTCACTGGTGCTaGTGTTTGCTATTGGCTCTATTGATGGGCAGTGTA +
Preference number: 6 (lower is better)
Translates to: FSQTKESQAHWC*CLLLALLMGSV
Trigger: TACACTGCCCATCAATAGAGCCAATAGCAAACACAAGCACCAGTGAGCCTGTGATTCCTTCGTTTGAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS CAA 90 bp TGTTTTTCTCAAACGAAGGAATCACAGGCTCACTGGTGCTTGTGTTaGCTATTGGCTCTATTGATGGGCAGTGTAATTCACCATTTCCCA +
Preference number: 6 (lower is better)
Translates to: CFSQTKESQAHWCLC*LLALLMGSVIHHFP
Trigger: TGGGAAATGGTGAATTACACTGCCCATCAATAGAGCCAATAGCAAACACAAGCACCAGTGAGCCTGTGATTCCTTCGTTTGAGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS CAA 72 bp ACTCAAGTGTCACGGAAGCAGGGACTATGCATGTTTTaGCTCAATGTTGTGTCCTTAACATCTAGGACAGTA +
Preference number: 6 (lower is better)
Translates to: TQVSRKQGLCMF*LNVVSLTSRTV
Trigger: TACTGTCCTAGATGTTAAGGACACAACATTGAGCAAAAACATGCATAGTCCCTGCTTCCGTGACACTTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295500.8
ENST00000497620.1
CDS CAA 90 bp GTGCTACAGGAAATACACCATACAGAAATGCATAATTTGATAAACTaGTATGGTTCACCACACTGTCGCCCTTGTCCAAGAGTTCCACCA +
Preference number: 6 (lower is better)
Translates to: VLQEIHHTEMHNLIN*YGSPHCRPCPRVPP
Trigger: TGGTGGAACTCTTGGACAAGGGCGACAGTGTGGTGAACCATACAAGTTTATCAAATTATGCATTTCTGTATGGTGTATTTCCTGTAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS GCA 72 bp ATTCAGTTCACTCAAGTGTCACGGAAGCAGGGACTATaGATGTTTTTGCTCAATGTTGTGTCCTTAACATCT +
Preference number: 6 (lower is better)
Translates to: IQFTQVSRKQGL*MFLLNVVSLTS
Trigger: AGATGTTAAGGACACAACATTGAGCAAAAACATGCATAGTCCCTGCTTCCGTGACACTTGAGTGAACTGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295500.8
ENST00000497620.1
CDS GCA 72 bp AGGTGGGTCATTAGTGGAATTAAATCCATGCGTTACTaGTGTAGGCAAAGTCTTGGTCATATTGACTGCAAT +
Preference number: 6 (lower is better)
Translates to: RWVISGIKSMRY*CRQSLGHIDCN
Trigger: ATTGCAGTCAATATGACCAAGACTTTGCCTACAGCAGTAACGCATGGATTTAATTCCACTAATGACCCACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS CAA 72 bp CCATGCGTTACTGCTGTAGGCAAAGTCTTGGTCATATaGACTGCAATGGTTAAGTTCTCTGCAGGTAAATTA +
Preference number: 6 (lower is better)
Translates to: PCVTAVGKVLVI*TAMVKFSAGKL
Trigger: TAATTTACCTGCAGAGAACTTAACCATTGCAGTCAATATGACCAAGACTTTGCCTACAGCAGTAACGCATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS CAA 72 bp ATCACCATCCCTGAGGTTATAATTTCTACTTCCATGTaGAATTGTGTTGCAAAGATAGCCACTCCTGGTGCT +
Preference number: 6 (lower is better)
Translates to: ITIPEVIISTSM*NCVAKIATPGA
Trigger: AGCACCAGGAGTGGCTATCTTTGCAACACAATTCAACATGGAAGTAGAAATTATAACCTCAGGGATGGTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS CAA 90 bp AATGATTGTTTTTCTCAAACGAAGGAATCACAGGCTCACTGGTGCTaGTGTTTGCTATTGGCTCTATTGATGGGCAGTGTAATTCACCAT +
Preference number: 6 (lower is better)
Translates to: NDCFSQTKESQAHWC*CLLLALLMGSVIHH
Trigger: ATGGTGAATTACACTGCCCATCAATAGAGCCAATAGCAAACACAAGCACCAGTGAGCCTGTGATTCCTTCGTTTGAGAAAAACAATCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS CAA 90 bp GAGAGTGTTTGCATTAATAGCAGGAGGACTCTGTTCAGGACTCTTTaGAAGAAATCTGTAAAACAAGTACTCATCCCGGAATTCATACTC +
Preference number: 6 (lower is better)
Translates to: ESVCINSRRTLFRTL*KKSVKQVLIPEFIL
Trigger: GAGTATGAATTCCGGGATGAGTACTTGTTTTACAGATTTCTTCAAAAGAGTCCTGAACAGAGTCCTCCTGCTATTAATGCAAACACTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS GCA 72 bp AATACTTATATCAAAACTAACATTCTGGATGGCATATaGCAATGGCTTAGGGTCCATAGTGGGAAAGGTCAG +
Preference number: 6 (lower is better)
Translates to: NTYIKTNILDGI*QWLRVHSGKGQ
Trigger: CTGACCTTTCCCACTATGGACCCTAAGCCATTGGCATATGCCATCCAGAATGTTAGTTTTGATATAAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS CAA 72 bp GAATTAAATCCATGCGTTACTGCTGTAGGCAAAGTCTaGGTCATATTGACTGCAATGGTTAAGTTCTCTGCA +
Preference number: 6 (lower is better)
Translates to: ELNPCVTAVGKV*VILTAMVKFSA
Trigger: TGCAGAGAACTTAACCATTGCAGTCAATATGACCAAGACTTTGCCTACAGCAGTAACGCATGGATTTAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS CAA 90 bp TCATTAGTGGAATTAAATCCATGCGTTACTGCTGTAGGCAAAGTCTaGGTCATATTGACTGCAATGGTTAAGTTCTCTGCAGGTAAATTA +
Preference number: 6 (lower is better)
Translates to: SLVELNPCVTAVGKV*VILTAMVKFSAGKL
Trigger: TAATTTACCTGCAGAGAACTTAACCATTGCAGTCAATATGACCAAGACTTTGCCTACAGCAGTAACGCATGGATTTAATTCCACTAATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS CAA 90 bp GCAAAGTCATTACTTTGTGTAGCAAAAATAGGGAATAGTCCAGCTTaGCTAAATCGACTATCAGGACTGGCAACCAATAAGGTTAATACA +
Preference number: 6 (lower is better)
Translates to: AKSLLCVAKIGNSPA*LNRLSGLATNKVNT
Trigger: TGTATTAACCTTATTGGTTGCCAGTCCTGATAGTCGATTTAGCAAAGCTGGACTATTCCCTATTTTTGCTACACAAAGTAATGACTTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4
CDS CAA 72 bp TCGACATATACAGGTACCTTTCGATCAAGAATAAAATaGAAGGCGATGCCAATGAAGACCATAAATACTATT +
Preference number: 6 (lower is better)
Translates to: STYTGTFRSRIK*KAMPMKTINTI
Trigger: AATAGTATTTATGGTCTTCATTGGCATCGCCTTCAATTTTATTCTTGATCGAAAGGTACCTGTATATGTCGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295500.8
ENST00000392551.6
ENST00000392552.7
ENST00000614352.4