RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPR139 (Homo sapiens)

Ensembl gene IDs: ENSG00000180269

Ensembl transcript IDs: ENST00000326571.7, ENST00000570682.2

Found 337 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGGCGTCAGCATGGGCACCTTTTGTGTCTGCGTTTGTGGCGAAATaGCAGCGCCAGCTGGGCTGTGAGACAGAGCTGAGAACACCTCCT +
Preference number: 1 (lower is better)
Translates to: EASAWAPFVSAFVAK*QRQLGCETELRTPP
Trigger: AGGAGGTGTTCTCAGCTCTGTCTCACAGCCCAGCTGGCGCTGCCATTTCGCCACAAACGCAGACACAAAAGGTGCCCATGCTGACGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR TCA 90 bp TTTTGTGTCTGCGTTTGTGGCGAAATGGCAGCGCCAGCTGGGCTGTaGGACAGAGCTGAGAACACCTCCTCTCATACCCGCAGAGCTGCA +
Preference number: 1 (lower is better)
Translates to: FCVCVCGEMAAPAGL*DRAENTSSHTRRAA
Trigger: TGCAGCTCTGCGGGTATGAGAGGAGGTGTTCTCAGCTCTGTCTCACAGCCCAGCTGGCGCTGCCATTTCGCCACAAACGCAGACACAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR GCA 90 bp TACAGGTTGCTTCTGGCACTTGAAGAAAGCCTTGAGCGTGGCGGCTaGCATGGTGCGGAACCGCTTGCTGATGAAGCAGTAGAGGAAGAA +
Preference number: 1 (lower is better)
Translates to: YRLLLALEESLERGG*HGAEPLADEAVEEE
Trigger: TTCTTCCTCTACTGCTTCATCAGCAAGCGGTTCCGCACCATGGCAGCCGCCACGCTCAAGGCTTTCTTCAAGTGCCAGAAGCAACCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR CCA 90 bp TTCCGGGTGCGGGCTGGGTATGAGACCGTGTGGTACTTGAGCGGGTaGCAGACAGCGATATACCTGTCAATGGTTAACGGTACAGTAATC +
Preference number: 1 (lower is better)
Translates to: FRVRAGYETVWYLSG*QTAIYLSMVNGTVI
Trigger: GATTACTGTACCGTTAACCATTGACAGGTATATCGCTGTCTGCCACCCGCTCAAGTACCACACGGTCTCATACCCAGCCCGCACCCGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR TCA 90 bp GGTGATGTAAACACTTACAATGACTTTCCGGGTGCGGGCTGGGTATaGGACCGTGTGGTACTTGAGCGGGTGGCAGACAGCGATATACCT +
Preference number: 1 (lower is better)
Translates to: GDVNTYNDFPGAGWV*DRVVLERVADSDIP
Trigger: AGGTATATCGCTGTCTGCCACCCGCTCAAGTACCACACGGTCTCATACCCAGCCCGCACCCGGAAAGTCATTGTAAGTGTTTACATCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR CCA 90 bp GACCTCAGCTCTCGGAAGAAGAGTGCAGGCTCAGCTATGTGCTACTaGGGCTTGGTAAGTCCCATAAATGAAGGGTTCCCAGTGACTGTG +
Preference number: 1 (lower is better)
Translates to: DLSSRKKSAGSAMCY*GLVSPINEGFPVTV
Trigger: CACAGTCACTGGGAACCCTTCATTTATGGGACTTACCAAGCCCCAGTAGCACATAGCTGAGCCTGCACTCTTCTTCCGAGAGCTGAGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR TCA 90 bp TGCAGGCTCAGCTATGTGCTACTGGGGCTTGGTAAGTCCCATAAATaGAGGGTTCCCAGTGACTGTGGATGGTACCAGGGCGAAATCACA +
Preference number: 1 (lower is better)
Translates to: CRLSYVLLGLGKSHK*RVPSDCGWYQGEIT
Trigger: TGTGATTTCGCCCTGGTACCATCCACAGTCACTGGGAACCCTTCATTTATGGGACTTACCAAGCCCCAGTAGCACATAGCTGAGCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR GCA 90 bp ATGAATGACCTCAGCTCTCGGAAGAAGAGTGCAGGCTCAGCTATGTaGTACTGGGGCTTGGTAAGTCCCATAAATGAAGGGTTCCCAGTG +
Preference number: 1 (lower is better)
Translates to: MNDLSSRKKSAGSAM*YWGLVSPINEGFPV
Trigger: CACTGGGAACCCTTCATTTATGGGACTTACCAAGCCCCAGTAGCACATAGCTGAGCCTGCACTCTTCTTCCGAGAGCTGAGGTCATTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR CCA 90 bp AACTGCCTTTTAGACCCCAGGTTTGAGGTCACAGCTATGCGGGTTTaGAGATTTCCTGAAGAAGCTCTGGCCACAGTTTGGATGGGATCC +
Preference number: 1 (lower is better)
Translates to: NCLLDPRFEVTAMRV*RFPEEALATVWMGS
Trigger: GGATCCCATCCAAACTGTGGCCAGAGCTTCTTCAGGAAATCTCCAAACCCGCATAGCTGTGACCTCAAACCTGGGGTCTAAAAGGCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR GCA 90 bp AGTCTGCGGGAGACAGGAAATCGGATTAGCACTCTTAAGGAGAGCTaGTCAGCCATAGGATGGGACACCTTCCCATCTGGAAATGGATTA +
Preference number: 1 (lower is better)
Translates to: SLRETGNRISTLKES*SAIGWDTFPSGNGL
Trigger: TAATCCATTTCCAGATGGGAAGGTGTCCCATCCTATGGCTGAGCAGCTCTCCTTAAGAGTGCTAATCCGATTTCCTGTCTCCCGCAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR GCA 90 bp CACAAACACTATGAAAAAGAGGACCAAGATGTCGGCAGCAGCGAGTaGCAAGAGATAGTTGTAGGAGGACTTCTGTCTTCTTGCCACCAG +
Preference number: 1 (lower is better)
Translates to: HKHYEKEDQDVGSSE*QEIVVGGLLSSCHQ
Trigger: CTGGTGGCAAGAAGACAGAAGTCCTCCTACAACTATCTCTTGGCACTCGCTGCTGCCGACATCTTGGTCCTCTTTTTCATAGTGTTTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR GCA 90 bp TCTCTTCCATCTCTTCTCATCTACCAGTCTGAGAATTGCCCAGTCTaGGGGAGACAGGAAATCGGATTAGCACTCTTAAGGAGAGCTGCT +
Preference number: 1 (lower is better)
Translates to: SLPSLLIYQSENCPV*GRQEIGLALLRRAA
Trigger: AGCAGCTCTCCTTAAGAGTGCTAATCCGATTTCCTGTCTCCCGCAGACTGGGCAATTCTCAGACTGGTAGATGAGAAGAGATGGAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR GCA 90 bp AAAAAGAGACAGAGAGAAATGCAATTTAAGGGAGGTGAGGGAATCTaGTTACCATTCCACTCAATGAGCATACGCCCTGGGGAGCGTGGG +
Preference number: 1 (lower is better)
Translates to: KKRQREMQFKGGEGI*LPFHSMSIRPGERG
Trigger: CCCACGCTCCCCAGGGCGTATGCTCATTGAGTGGAATGGTAAGCAGATTCCCTCACCTCCCTTAAATTGCATTTCTCTCTGTCTCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR CCA 90 bp GGAAATCGGATTAGCACTCTTAAGGAGAGCTGCTCAGCCATAGGATaGGACACCTTCCCATCTGGAAATGGATTAGACAGAGGCAGTAGT +
Preference number: 1 (lower is better)
Translates to: GNRISTLKESCSAIG*DTFPSGNGLDRGSS
Trigger: ACTACTGCCTCTGTCTAATCCATTTCCAGATGGGAAGGTGTCCCATCCTATGGCTGAGCAGCTCTCCTTAAGAGTGCTAATCCGATTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR CCA 90 bp TTGAGGTCACAGCTATGCGGGTTTGGAGATTTCCTGAAGAAGCTCTaGCCACAGTTTGGATGGGATCCAATACTCTTCTATTCCCACAGT +
Preference number: 1 (lower is better)
Translates to: LRSQLCGFGDFLKKL*PQFGWDPILFYSHS
Trigger: ACTGTGGGAATAGAAGAGTATTGGATCCCATCCAAACTGTGGCCAGAGCTTCTTCAGGAAATCTCCAAACCCGCATAGCTGTGACCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR TCA 90 bp TGGATGGATGAGAATTCCAGCACTTCTATGATCTTGTCGGGGACCTaGGGCATCTGCATGTTCAAGATGAAATCTTCCAACAGGAAGTCC +
Preference number: 1 (lower is better)
Translates to: WMDENSSTSMILSGT*GICMFKMKSSNRKS
Trigger: GGACTTCCTGTTGGAAGATTTCATCTTGAACATGCAGATGCCTCAGGTCCCCGACAAGATCATAGAAGTGCTGGAATTCTCATCCATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR CCA 90 bp TGCGGGTTTGGAGATTTCCTGAAGAAGCTCTGGCCACAGTTTGGATaGGATCCAATACTCTTCTATTCCCACAGTGTCATTCTGAAGCTA +
Preference number: 1 (lower is better)
Translates to: CGFGDFLKKLWPQFG*DPILFYSHSVILKL
Trigger: TAGCTTCAGAATGACACTGTGGGAATAGAAGAGTATTGGATCCCATCCAAACTGTGGCCAGAGCTTCTTCAGGAAATCTCCAAACCCGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR CCA 90 bp GCTATGCGGGTTTGGAGATTTCCTGAAGAAGCTCTGGCCACAGTTTaGATGGGATCCAATACTCTTCTATTCCCACAGTGTCATTCTGAA +
Preference number: 1 (lower is better)
Translates to: AMRVWRFPEEALATV*MGSNTLLFPQCHSE
Trigger: TTCAGAATGACACTGTGGGAATAGAAGAGTATTGGATCCCATCCAAACTGTGGCCAGAGCTTCTTCAGGAAATCTCCAAACCCGCATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR GCA 90 bp CATGTGTGTGTGTGTGCTGCACACATAAGTAGCAATTTCCAGGGATaGCCCTATTCATTACATCCTAGAAATGTTCTTGCCTTGGACAGG +
Preference number: 1 (lower is better)
Translates to: HVCVCAAHISSNFQG*PYSLHPRNVLALDR
Trigger: CCTGTCCAAGGCAAGAACATTTCTAGGATGTAATGAATAGGGGCATCCCTGGAAATTGCTACTTATGTGTGCAGCACACACACACACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR CCA 90 bp TACCAGGGCGAAATCACAGACTACTTCTCTACTTTGTGTCCTAACTaGTCACAGGATGATGACACAAGCTCCAATGGCATCTTCAAACTG +
Preference number: 1 (lower is better)
Translates to: YQGEITDYFSTLCPN*SQDDDTSSNGIFKL
Trigger: CAGTTTGAAGATGCCATTGGAGCTTGTGTCATCATCCTGTGACCAGTTAGGACACAAAGTAGAGAAGTAGTCTGTGATTTCGCCCTGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR CCA 90 bp ATATACCTGTCAATGGTTAACGGTACAGTAATCCATATGGAGGTGTaGATGGATGAGAATTCCAGCACTTCTATGATCTTGTCGGGGACC +
Preference number: 1 (lower is better)
Translates to: IYLSMVNGTVIHMEV*MDENSSTSMILSGT
Trigger: GGTCCCCGACAAGATCATAGAAGTGCTGGAATTCTCATCCATCCACACCTCCATATGGATTACTGTACCGTTAACCATTGACAGGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR TCA 90 bp CTAATGTTCTCAGATACATTAGAATCACACAATATGGTCCCTAAATaGGAGCCAATTCTGTCTTGTCATCAACCAGAGAAACAGCAACTT +
Preference number: 1 (lower is better)
Translates to: LMFSDTLESHNMVPK*EPILSCHQPEKQQL
Trigger: AAGTTGCTGTTTCTCTGGTTGATGACAAGACAGAATTGGCTCTCATTTAGGGACCATATTGTGTGATTCTAATGTATCTGAGAACATTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR CAA 90 bp GCCATGTGCGTCAAAGGGCAGACGAGGCGTCAGCATGGGCACCTTTaGTGTCTGCGTTTGTGGCGAAATGGCAGCGCCAGCTGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: AMCVKGQTRRQHGHL*CLRLWRNGSASWAV
Trigger: CACAGCCCAGCTGGCGCTGCCATTTCGCCACAAACGCAGACACAAAAGGTGCCCATGCTGACGCCTCGTCTGCCCTTTGACGCACATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR TCA 90 bp GGGGATGCTGGTCAGGAAGCAGGTGATGTAAACACTTACAATGACTTTCCGGGTGGTCACTGGTGGGGCTaGGCAAGCAGACCGCCCTCC +
Preference number: 2 (lower is better)
Translates to: GDAGQEAGDVNTYNDFPGGHWWG*ASRPPS
Trigger: GGAGGGCGGTCTGCTTGCTCAGCCCCACCAGTGACC...ACCCGGAAAGTCATTGTAAGTGTTTACATCACCTGCTTCCTGACCAGCATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR-3UTR TCA 90 bp GAACTGTACAGGTTGCTTCTGGCACTTGAAGAAAGCCTTGAGCGTGGCGGCTGCGGTGCGGGCTGGGTATaGGACCGTGTGGTACTTGAG +
Preference number: 2 (lower is better)
Translates to: ELYRLLLALEESLERGGCGAGWV*DRVVLE
Trigger: CTCAAGTACCACACGGTCTCATACCCAGCCCGCACC...GCAGCCGCCACGCTCAAGGCTTTCTTCAAGTGCCAGAAGCAACCTGTACAGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR-3UTR CCA 90 bp GGCAATGTCGGACATGATGTGTACCAGCCAGCGGTTCTGGATGGGCGCCCCATACTTCAGTCCAGATGTTaGGCCACCAGTAATAGGGGA +
Preference number: 2 (lower is better)
Translates to: GNVGHDVYQPAVLDGRPILQSRC*ATSNRG
Trigger: TCCCCTATTACTGGTGGCCCAACATCTGGACTGAAG...TATGGGGCGCCCATCCAGAACCGCTGGCTGGTACACATCATGTCCGACATTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR CAA 90 bp ACAATGACTTTCCGGGTGCGGGCTGGGTATGAGACCGTGTGGTACTaGAGCGGGTGGCAGACAGCGATATACCTGTCAATGGTTAACGGT +
Preference number: 2 (lower is better)
Translates to: TMTFRVRAGYETVWY*SGWQTAIYLSMVNG
Trigger: ACCGTTAACCATTGACAGGTATATCGCTGTCTGCCACCCGCTCAAGTACCACACGGTCTCATACCCAGCCCGCACCCGGAAAGTCATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR-3UTR TCA 90 bp CCCCGTGGAGTAGCCACGGAGACGAAAATTGCTCTTCCTCCTGAGCTTGTACACATCTTGTCGGGGACCTaGGGCATCTGCATGTTCAAG +
Preference number: 2 (lower is better)
Translates to: PRGVATETKIALPPELVHILSGT*GICMFK
Trigger: CTTGAACATGCAGATGCCTCAGGTCCCCGACAAGAT...GTGTACAAGCTCAGGAGGAAGAGCAATTTTCGTCTCCGTGGCTACTCCACGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR-3UTR TCA 90 bp GGGGATGCTGGTCAGGAAGCAGGTGATGTAAACACTTACAATGACTTTCCGGGTAGACCGTGTGGTACTTaGGCGGGTGGCAGACAGCGA +
Preference number: 2 (lower is better)
Translates to: GDAGQEAGDVNTYNDFPGRPCGT*AGGRQR
Trigger: TCGCTGTCTGCCACCCGCTCAAGTACCACACGGTCT...ACCCGGAAAGTCATTGTAAGTGTTTACATCACCTGCTTCCTGACCAGCATCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR-3UTR CCA 90 bp GAACTGTACAGGTTGCTTCTGGCACTTGAAGAAAGCCTTGAGCGTGGCGGCTGCCTTCTTGCCACCAGCTaGGAGAGGATGATCACTGTC +
Preference number: 2 (lower is better)
Translates to: ELYRLLLALEESLERGGCLLATS*ERMITV
Trigger: GACAGTGATCATCCTCTCCCAGCTGGTGGCAAGAAG...GCAGCCGCCACGCTCAAGGCTTTCTTCAAGTGCCAGAAGCAACCTGTACAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR-3UTR CCA 90 bp CAAGAACTGGCACCCCCTTTTGAGCCATGTGCGTCAAAGGGCAGACGAGGCGTCTTCCTGAAGAAGCTCTaGCCACAGTTTGGATGGGAT +
Preference number: 2 (lower is better)
Translates to: QELAPPFEPCASKGRRGVFLKKL*PQFGWD
Trigger: ATCCCATCCAAACTGTGGCCAGAGCTTCTTCAGGAA...GACGCCTCGTCTGCCCTTTGACGCACATGGCTCAAAAGGGGGTGCCAGTTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR TCA 90 bp AGAAGGGCTAGCATGTTGGCAATGTCGGACATGATGTGTACCAGCCAGCGGTTCATCCAGATGAGGACGTaGTGCACAGAGGTGCTGATG +
Preference number: 2 (lower is better)
Translates to: RRASMLAMSDMMCTSQRFIQMRT*CTEVLM
Trigger: CATCAGCACCTCTGTGCATCACGTCCTCATCTGGAT...GAACCGCTGGCTGGTACACATCATGTCCGACATTGCCAACATGCTAGCCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR-3UTR GCA 90 bp AGAAGGGCTAGCATGTTGGCAATGTCGGACATGATGTGTACCAGCCAGCGGTTCGTCGGCAGCAGCGAGTaGCAAGAGATAGTTGTAGGA +
Preference number: 2 (lower is better)
Translates to: RRASMLAMSDMMCTSQRFVGSSE*QEIVVG
Trigger: TCCTACAACTATCTCTTGGCACTCGCTGCTGCCGAC...GAACCGCTGGCTGGTACACATCATGTCCGACATTGCCAACATGCTAGCCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR-3UTR CCA 90 bp GAAGAAAGCCTTGAGCGTGGCGGCTGCCATGGTGCGGAACCGCTTGCTGATGAAATCCATATGGAGGTGTaGATGGATGAGAATTCCAGC +
Preference number: 2 (lower is better)
Translates to: EESLERGGCHGAEPLADEIHMEV*MDENSS
Trigger: GCTGGAATTCTCATCCATCCACACCTCCATATGGAT...TTCATCAGCAAGCGGTTCCGCACCATGGCAGCCGCCACGCTCAAGGCTTTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR-3UTR CCA 90 bp AGAAGGGCTAGCATGTTGGCAATGTCGGACATGATGTGTACCAGCCAGCGGTTCTGGTACTTGAGCGGGTaGCAGACAGCGATATACCTG +
Preference number: 2 (lower is better)
Translates to: RRASMLAMSDMMCTSQRFWYLSG*QTAIYL
Trigger: CAGGTATATCGCTGTCTGCCACCCGCTCAAGTACCA...GAACCGCTGGCTGGTACACATCATGTCCGACATTGCCAACATGCTAGCCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR-3UTR CCA 90 bp CCATTTTTGTCATACTGGTACACCAGCATCTTGATGCAGTGTGAGTTTGCCGGCCGGTGGTCTTCCCCGTaGAGTAGCCACGGAGACGAA +
Preference number: 2 (lower is better)
Translates to: PFLSYWYTSILMQCEFAGRWSSP*SSHGDE
Trigger: TTCGTCTCCGTGGCTACTCCACGGGGAAGACCACCG...GCCGGCAAACTCACACTGCATCAAGATGCTGGTGTACCAGTATGACAAAAATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR-3UTR CCA 90 bp CTCGAGAATTCCTCCTTTCCCCCTGCGCACCAGGCAGGGTCTTTGTTTTGGAGGGCTCTGGCCACAGTTTaGATGGGATCCAATACTCTT +
Preference number: 2 (lower is better)
Translates to: LENSSFPPAHQAGSLFWRALATV*MGSNTL
Trigger: AAGAGTATTGGATCCCATCCAAACTGTGGCCAGAGC...CCTCCAAAACAAAGACCCTGCCTGGTGCGCAGGGGGAAAGGAGGAATTCTCGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR CAA 90 bp AGCTCTCGGAAGAAGAGTGCAGGCTCAGCTATGTGCTACTGGGGCTaGGTAAGTCCCATAAATGAAGGGTTCCCAGTGACTGTGGATGGT +
Preference number: 2 (lower is better)
Translates to: SSRKKSAGSAMCYWG*VSPINEGFPVTVDG
Trigger: ACCATCCACAGTCACTGGGAACCCTTCATTTATGGGACTTACCAAGCCCCAGTAGCACATAGCTGAGCCTGCACTCTTCTTCCGAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR CAA 90 bp AAAGGATCTGGGTTAAATAGCTTTACCAAGAACTGGCACCCCCTTTaGAGCCATGTGCGTCAAAGGGCAGACGAGGCGTCAGCATGGGCA +
Preference number: 2 (lower is better)
Translates to: KGSGLNSFTKNWHPL*SHVRQRADEASAWA
Trigger: TGCCCATGCTGACGCCTCGTCTGCCCTTTGACGCACATGGCTCAAAAGGGGGTGCCAGTTCTTGGTAAAGCTATTTAACCCAGATCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR TCA 90 bp GAAGCAGTGGATCCAGATGAGGACGTGATGCACAGAGGTGCTGATGTAGTCTTCATTCCAGCACTTCTATaGTCTTGTCGGGGACCTGAG +
Preference number: 2 (lower is better)
Translates to: EAVDPDEDVMHRGADVVFIPALL*SCRGPE
Trigger: CTCAGGTCCCCGACAAGATCATAGAAGTGCTGGAAT...GAAGACTACATCAGCACCTCTGTGCATCACGTCCTCATCTGGATCCACTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR-3UTR GCA 90 bp TGCTACTGGGGCTTGGTAAGTCCCATAAATGAAGGGTTCCCAGTGACTGTGGATTACCAGTCTGAGAATTaGCCAGTCTGCGGGAGACAG +
Preference number: 2 (lower is better)
Translates to: CYWGLVSPINEGFPVTVDYQSEN*PVCGRQ
Trigger: CTGTCTCCCGCAGACTGGGCAATTCTCAGACTGGTA...ATCCACAGTCACTGGGAACCCTTCATTTATGGGACTTACCAAGCCCCAGTAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR GCA 90 bp TCTGTCATTCCCCTCATTTCCTTCCCCATGAGACATTTCAGCCGTCAAGTTGTTTTCCTCCTTTCCCCCTaGGCACCAGGCAGGGTCTTT +
Preference number: 2 (lower is better)
Translates to: SVIPLISFPMRHFSRQVVFLLSP*APGRVF
Trigger: AAAGACCCTGCCTGGTGCGCAGGGGGAAAGGAGGAA...AACAACTTGACGGCTGAAATGTCTCATGGGGAAGGAAATGAGGGGAATGACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR CCA 90 bp CCAGTAATAGGGGATGCTGGTCAGGAAGCAGGTGATGTAAACACTTACAATGACGGGTATGAGACCGTGTaGTACTTGAGCGGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: PVIGDAGQEAGDVNTYNDGYETV*YLSGWQ
Trigger: CTGCCACCCGCTCAAGTACCACACGGTCTCATACCC...GTCATTGTAAGTGTTTACATCACCTGCTTCCTGACCAGCATCCCCTATTACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR-3UTR CCA 90 bp ATCTTTTCCAATAGCAGGGTGTTTGCAACACACAAGTTCGTGCCCACTCCGGTCCCCAGTGACTGTGGATaGTACCAGGGCGAAATCACA +
Preference number: 2 (lower is better)
Translates to: IFSNSRVFATHKFVPTPVPSDCG*YQGEIT
Trigger: TGTGATTTCGCCCTGGTACCATCCACAGTCACTGGG...GACCGGAGTGGGCACGAACTTGTGTGTTGCAAACACCCTGCTATTGGAAAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR TCA 90 bp ATTGGTGTAGAACTGTACAGGTTGCTTCTGGCACTTGAAGAAAGCCTTGAGCGTTGGCAATGTCGGACATaGTGTGTACCAGCCAGCGGT +
Preference number: 2 (lower is better)
Translates to: IGVELYRLLLALEESLERWQCRT*CVPASG
Trigger: ACCGCTGGCTGGTACACATCATGTCCGACATTGCCA...ACGCTCAAGGCTTTCTTCAAGTGCCAGAAGCAACCTGTACAGTTCTACACCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR-3UTR TCA 90 bp ATAGGATGGGACACCTTCCCATCTGGAAATGGATTAGACAGAGGCAGTAGTTGCTTTAGACCCCAGGTTTaGGGTCACAGCTATGCGGGT +
Preference number: 2 (lower is better)
Translates to: IGWDTFPSGNGLDRGSSCFRPQV*GHSYAG
Trigger: ACCCGCATAGCTGTGACCTCAAACCTGGGGTCTAAA...GCAACTACTGCCTCTGTCTAATCCATTTCCAGATGGGAAGGTGTCCCATCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR TCA 90 bp AGAGACAGAGAGAAATGCAATTTAAGGGAGGTGAGGGAATCTGCTTACCATTCCACTGGCACCCCCTTTTaGGCCATGTGCGTCAAAGGG +
Preference number: 2 (lower is better)
Translates to: RDREKCNLREVRESAYHSTGTPF*AMCVKG
Trigger: CCCTTTGACGCACATGGCTCAAAAGGGGGTGCCAGT...GGAATGGTAAGCAGATTCCCTCACCTCCCTTAAATTGCATTTCTCTCTGTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR CAA 90 bp GACTGTGGATGGTACCAGGGCGAAATCACAGACTACTTCTCTACTTaGTGTCCTAACTGGTCACAGGATGATGACACAAGCTCCAATGGC +
Preference number: 2 (lower is better)
Translates to: DCGWYQGEITDYFST*CPNWSQDDDTSSNG
Trigger: GCCATTGGAGCTTGTGTCATCATCCTGTGACCAGTTAGGACACAAAGTAGAGAAGTAGTCTGTGATTTCGCCCTGGTACCATCCACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR GCA 90 bp CAGGGATGCCCCTATTCATTACATCCTAGAAATGTTCTTGCCTTGGACAGGCAAGAGAATTGCCCAGTCTaGGGGAGACAGGAAATCGGA +
Preference number: 2 (lower is better)
Translates to: QGCPYSLHPRNVLALDRQENCPV*GRQEIG
Trigger: TCCGATTTCCTGTCTCCCGCAGACTGGGCAATTCTC...TTGCCTGTCCAAGGCAAGAACATTTCTAGGATGTAATGAATAGGGGCATCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR GCA 90 bp ATCTTTTCCAATAGCAGGGTGTTTGCAACACACAAGTTCGTGCCCACTCCGGTCACTGGTAGGAGCTTTTaGTGTCATTACGACTCTGTG +
Preference number: 2 (lower is better)
Translates to: IFSNSRVFATHKFVPTPVTGRSF*CHYDSV
Trigger: CACAGAGTCGTAATGACAGCAAAAGCTCCTACCAGT...GACCGGAGTGGGCACGAACTTGTGTGTTGCAAACACCCTGCTATTGGAAAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR CAA 90 bp GCTACTTGTTATGGAAAAGTTATGATTGGTGTAGAACTGTACAGGTaGCTTCTGGCACTTGAAGAAAGCCTTGAGCGTGGCGGCTGCCAT +
Preference number: 2 (lower is better)
Translates to: ATCYGKVMIGVELYR*LLALEESLERGGCH
Trigger: ATGGCAGCCGCCACGCTCAAGGCTTTCTTCAAGTGCCAGAAGCAACCTGTACAGTTCTACACCAATCATAACTTTTCCATAACAAGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR-3UTR TCA 90 bp AGAGACAGAGAGAAATGCAATTTAAGGGAGGTGAGGGAATCTGCTTACCATTCCGCAGGGTTGGCAACTTaGCACGTAAAAAGGCTTCTC +
Preference number: 2 (lower is better)
Translates to: RDREKCNLREVRESAYHSAGLAT*HVKRLL
Trigger: GAGAAGCCTTTTTACGTGTCAAGTTGCCAACCCTGC...GGAATGGTAAGCAGATTCCCTCACCTCCCTTAAATTGCATTTCTCTCTGTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR GCA 90 bp AAAAAGACACAGCATGGTGGTGCGTATCATCATTGCAATGTCCAACCAAGGACAACTCTTAAGGAGAGCTaGTCAGCCATAGGATGGGAC +
Preference number: 2 (lower is better)
Translates to: KKTQHGGAYHHCNVQPRTTLKES*SAIGWD
Trigger: GTCCCATCCTATGGCTGAGCAGCTCTCCTTAAGAGT...TGTCCTTGGTTGGACATTGCAATGATGATACGCACCACCATGCTGTGTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR GCA 90 bp AGAGACAGAGAGAAATGCAATTTAAGGGAGGTGAGGGAATCTGCTTACCATTCCCTCTCGGAAGAAGAGTaGAGGCTCAGCTATGTGCTA +
Preference number: 2 (lower is better)
Translates to: RDREKCNLREVRESAYHSLSEEE*RLSYVL
Trigger: TAGCACATAGCTGAGCCTGCACTCTTCTTCCGAGAG...GGAATGGTAAGCAGATTCCCTCACCTCCCTTAAATTGCATTTCTCTCTGTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR CCA 90 bp ATCTTTTCCAATAGCAGGGTGTTTGCAACACACAAGTTCGTGCCCACTCCGGTCACTTTGTGTCCTAACTaGTCACAGGATGATGACACA +
Preference number: 2 (lower is better)
Translates to: IFSNSRVFATHKFVPTPVTLCPN*SQDDDT
Trigger: TGTGTCATCATCCTGTGACCAGTTAGGACACAAAGT...GACCGGAGTGGGCACGAACTTGTGTGTTGCAAACACCCTGCTATTGGAAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR CCA 90 bp CAGGGATGCCCCTATTCATTACATCCTAGAAATGTTCTTGCCTTGGACAGGCAACAGCTGACACAGGGATaGGTTGAAACAATGGCAAGT +
Preference number: 2 (lower is better)
Translates to: QGCPYSLHPRNVLALDRQQLTQG*VETMAS
Trigger: ACTTGCCATTGTTTCAACCCATCCCTGTGTCAGCTG...TTGCCTGTCCAAGGCAAGAACATTTCTAGGATGTAATGAATAGGGGCATCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR TCA 90 bp GACCTGAGGCATCTGCATGTTCAAGATGAAATCTTCCAACAGGAAGTCCACAAACCAGCTGGGAGAGGATaGTCACTGTCAAGATATTTG +
Preference number: 2 (lower is better)
Translates to: DLRHLHVQDEIFQQEVHKPAGRG*SLSRYL
Trigger: CAAATATCTTGACAGTGATCATCCTCTCCCAGCTGG...TTTGTGGACTTCCTGTTGGAAGATTTCATCTTGAACATGCAGATGCCTCAGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR-3UTR TCA 90 bp AGAGACAGAGAGAAATGCAATTTAAGGGAGGTGAGGGAATCTGCTTACCATTCCGGTAAGTCCCATAAATaGAGGGTTCCCAGTGACTGT +
Preference number: 2 (lower is better)
Translates to: RDREKCNLREVRESAYHSGKSHK*RVPSDC
Trigger: ACAGTCACTGGGAACCCTTCATTTATGGGACTTACC...GGAATGGTAAGCAGATTCCCTCACCTCCCTTAAATTGCATTTCTCTCTGTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR GCA 90 bp TCTGTCATTCCCCTCATTTCCTTCCCCATGAGACATTTCAGCCGTCAAGTTGTTGACACAGCATGGTGGTaGGTATCATCATTGCAATGT +
Preference number: 2 (lower is better)
Translates to: SVIPLISFPMRHFSRQVVDTAWW*VSSLQC
Trigger: ACATTGCAATGATGATACGCACCACCATGCTGTGTC...AACAACTTGACGGCTGAAATGTCTCATGGGGAAGGAAATGAGGGGAATGACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR CCA 90 bp AAAAAGACACAGCATGGTGGTGCGTATCATCATTGCAATGTCCAACCAAGGACAGGACACCTTCCCATCTaGAAATGGATTAGACAGAGG +
Preference number: 2 (lower is better)
Translates to: KKTQHGGAYHHCNVQPRTGHLPI*KWIRQR
Trigger: CCTCTGTCTAATCCATTTCCAGATGGGAAGGTGTCC...TGTCCTTGGTTGGACATTGCAATGATGATACGCACCACCATGCTGTGTCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR CCA 90 bp AAAAAGACACAGCATGGTGGTGCGTATCATCATTGCAATGTCCAACCAAGGACATCAGCTATGTGCTACTaGGGCTTGGTAAGTCCCATA +
Preference number: 2 (lower is better)
Translates to: KKTQHGGAYHHCNVQPRTSAMCY*GLVSPI
Trigger: TATGGGACTTACCAAGCCCCAGTAGCACATAGCTGA...TGTCCTTGGTTGGACATTGCAATGATGATACGCACCACCATGCTGTGTCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR CCA 90 bp ATCTTTTCCAATAGCAGGGTGTTTGCAACACACAAGTTCGTGCCCACTCCGGTCGATGGGTTGAAACAATaGCAAGTGTGGGCTTATTTT +
Preference number: 2 (lower is better)
Translates to: IFSNSRVFATHKFVPTPVDGLKQ*QVWAYF
Trigger: AAAATAAGCCCACACTTGCCATTGTTTCAACCCATC...GACCGGAGTGGGCACGAACTTGTGTGTTGCAAACACCCTGCTATTGGAAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR TCA 90 bp TCCAGGGGCTACTTGTTATGGAAAAGTTATGATTGGTGTAGAACTGTACAGGTTTGTAAACACTTACAATaGCTTTCCGGGTGCGGGCTG +
Preference number: 2 (lower is better)
Translates to: SRGYLLWKSYDWCRTVQVCKHLQ*LSGCGL
Trigger: CAGCCCGCACCCGGAAAGTCATTGTAAGTGTTTACA...AACCTGTACAGTTCTACACCAATCATAACTTTTCCATAACAAGTAGCCCCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR-3UTR TCA 90 bp TCATCATTGCAATGTCCAACCAAGGACACAAATCATATAGCAAGAGAGAAGCTAGCTGTGAGACAGAGCTaGGAACACCTCCTCTCATAC +
Preference number: 2 (lower is better)
Translates to: SSLQCPTKDTNHIAREKLAVRQS*EHLLSY
Trigger: GTATGAGAGGAGGTGTTCTCAGCTCTGTCTCACAGC...TAGCTTCTCTCTTGCTATATGATTTGTGTCCTTGGTTGGACATTGCAATGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR CCA 90 bp TCATCATTGCAATGTCCAACCAAGGACACAAATCATATAGCAAGAGAGAAGCTATGCTCAGCCATAGGATaGGACACCTTCCCATCTGGA +
Preference number: 2 (lower is better)
Translates to: SSLQCPTKDTNHIAREKLCSAIG*DTFPSG
Trigger: TCCAGATGGGAAGGTGTCCCATCCTATGGCTGAGCA...TAGCTTCTCTCTTGCTATATGATTTGTGTCCTTGGTTGGACATTGCAATGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR CCA 90 bp AAAAAGACACAGCATGGTGGTGCGTATCATCATTGCAATGTCCAACCAAGGACAACAGCTATGCGGGTTTaGAGATTTCCTGAAGAAGCT +
Preference number: 2 (lower is better)
Translates to: KKTQHGGAYHHCNVQPRTTAMRV*RFPEEA
Trigger: AGCTTCTTCAGGAAATCTCCAAACCCGCATAGCTGT...TGTCCTTGGTTGGACATTGCAATGATGATACGCACCACCATGCTGTGTCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR CCA 90 bp CAGGGATGCCCCTATTCATTACATCCTAGAAATGTTCTTGCCTTGGACAGGCAAGCTTCTCTAGGAAGCTaGAGTGATACCATAACAAGA +
Preference number: 2 (lower is better)
Translates to: QGCPYSLHPRNVLALDRQASLGS*SDTITR
Trigger: TCTTGTTATGGTATCACTCCAGCTTCCTAGAGAAGC...TTGCCTGTCCAAGGCAAGAACATTTCTAGGATGTAATGAATAGGGGCATCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR CCA 90 bp AGAAGTAATAAATTAAAGTGTCTGAGGAAAATGTTCCCAATGCACACCCAGTTTGACGAGGCGTCAGCATaGGCACCTTTTGTGTCTGCG +
Preference number: 2 (lower is better)
Translates to: RSNKLKCLRKMFPMHTQFDEASA*APFVSA
Trigger: CGCAGACACAAAAGGTGCCCATGCTGACGCCTCGTC...AAACTGGGTGTGCATTGGGAACATTTTCCTCAGACACTTTAATTTATTACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR TCA 90 bp AGAAGTAATAAATTAAAGTGTCTGAGGAAAATGTTCCCAATGCACACCCAGTTTATGAAGGGTTCCCAGTaGCTGTGGATGGTACCAGGG +
Preference number: 2 (lower is better)
Translates to: RSNKLKCLRKMFPMHTQFMKGSQ*LWMVPG
Trigger: CCCTGGTACCATCCACAGTCACTGGGAACCCTTCAT...AAACTGGGTGTGCATTGGGAACATTTTCCTCAGACACTTTAATTTATTACTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR CCA 90 bp AAAAAGACACAGCATGGTGGTGCGTATCATCATTGCAATGTCCAACCAAGGACATGGCCACAGTTTGGATaGGATCCAATACTCTTCTAT +
Preference number: 2 (lower is better)
Translates to: KKTQHGGAYHHCNVQPRTWPQFG*DPILFY
Trigger: ATAGAAGAGTATTGGATCCCATCCAAACTGTGGCCA...TGTCCTTGGTTGGACATTGCAATGATGATACGCACCACCATGCTGTGTCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR TCA 90 bp AGAAGTAATAAATTAAAGTGTCTGAGGAAAATGTTCCCAATGCACACCCAGTTTTCTCATCTACCAGTCTaGGAATTGCCCAGTCTGCGG +
Preference number: 2 (lower is better)
Translates to: RSNKLKCLRKMFPMHTQFSHLPV*ELPSLR
Trigger: CCGCAGACTGGGCAATTCTCAGACTGGTAGATGAGA...AAACTGGGTGTGCATTGGGAACATTTTCCTCAGACACTTTAATTTATTACTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR GCA 90 bp TCATCATTGCAATGTCCAACCAAGGACACAAATCATATAGCAAGAGAGAAGCTATTGAGGTCACAGCTATaGGGGTTTGGAGATTTCCTG +
Preference number: 2 (lower is better)
Translates to: SSLQCPTKDTNHIAREKLLRSQL*GFGDFL
Trigger: CAGGAAATCTCCAAACCCGCATAGCTGTGACCTCAA...TAGCTTCTCTCTTGCTATATGATTTGTGTCCTTGGTTGGACATTGCAATGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR TCA 90 bp AGAAGTAATAAATTAAAGTGTCTGAGGAAAATGTTCCCAATGCACACCCAGTTTGAGGGAAGTGATGAATaGCCTCAGCTCTCGGAAGAA +
Preference number: 2 (lower is better)
Translates to: RSNKLKCLRKMFPMHTQFEGSDE*PQLSEE
Trigger: TTCTTCCGAGAGCTGAGGTCATTCATCACTTCCCTC...AAACTGGGTGTGCATTGGGAACATTTTCCTCAGACACTTTAATTTATTACTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR TCA 90 bp TCCAGGGGCTACTTGTTATGGAAAAGTTATGATTGGTGTAGAACTGTACAGGTTTCTGCATGTTCAAGATaGAATCTTCCAACAGGAAGT +
Preference number: 2 (lower is better)
Translates to: SRGYLLWKSYDWCRTVQVSACSR*NLPTGS
Trigger: ACTTCCTGTTGGAAGATTTCATCTTGAACATGCAGA...AACCTGTACAGTTCTACACCAATCATAACTTTTCCATAACAAGTAGCCCCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR-3UTR TCA 90 bp TCATCATTGCAATGTCCAACCAAGGACACAAATCATATAGCAAGAGAGAAGCTACAGAGCTGCAGTTCCTaGCCCTTGAATATTAAATTC +
Preference number: 2 (lower is better)
Translates to: SSLQCPTKDTNHIAREKLQSCSS*PLNIKF
Trigger: GAATTTAATATTCAAGGGTCAGGAACTGCAGCTCTG...TAGCTTCTCTCTTGCTATATGATTTGTGTCCTTGGTTGGACATTGCAATGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR CAA 90 bp GCAATTTCCAGGGATGCCCCTATTCATTACATCCTAGAAATGTTCTaGCCTTGGACAGGCAAGGGTAGAATAAATAAACACACTTATATT +
Preference number: 2 (lower is better)
Translates to: AISRDAPIHYILEMF*PWTGKGRINKHTYI
Trigger: AATATAAGTGTGTTTATTTATTCTACCCTTGCCTGTCCAAGGCAAGAACATTTCTAGGATGTAATGAATAGGGGCATCCCTGGAAATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR TCA 90 bp AGAAGTAATAAATTAAAGTGTCTGAGGAAAATGTTCCCAATGCACACCCAGTTTAATAAAACAATTTGGTaGGGGCCTCAGCAAGCAAGG +
Preference number: 2 (lower is better)
Translates to: RSNKLKCLRKMFPMHTQFNKTIW*GPQQAR
Trigger: CCTTGCTTGCTGAGGCCCTCACCAAATTGTTTTATT...AAACTGGGTGTGCATTGGGAACATTTTCCTCAGACACTTTAATTTATTACTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR TCA 90 bp AAAGTGTCTGAGGAAAATGTTCCCAATGCACACCCAGTTTTTAAACATCAACAAAACAAGAAGCAATTTTaGGTAACGGGATCGTATGCA +
Preference number: 2 (lower is better)
Translates to: KVSEENVPNAHPVFKHQQNKKQF*VTGSYA
Trigger: TGCATACGATCCCGTTACTCAAAATTGCTTCTTGTT...TTGTTGATGTTTAAAAACTGGGTGTGCATTGGGAACATTTTCCTCAGACACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR TCA 90 bp AAAGTGTCTGAGGAAAATGTTCCCAATGCACACCCAGTTTTTAAACATCAACAAAATATGGTCCCTAAATaGGAGCCAATTCTGTCTTGT +
Preference number: 2 (lower is better)
Translates to: KVSEENVPNAHPVFKHQQNMVPK*EPILSC
Trigger: ACAAGACAGAATTGGCTCTCATTTAGGGACCATATT...TTGTTGATGTTTAAAAACTGGGTGTGCATTGGGAACATTTTCCTCAGACACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR GCA 72 bp GGCAGACGAGGCGTCAGCATGGGCACCTTTTGTGTCTaGGTTTGTGGCGAAATGGCAGCGCCAGCTGGGCTG +
Preference number: 3 (lower is better)
Translates to: GRRGVSMGTFCV*VCGEMAAPAGL
Trigger: CAGCCCAGCTGGCGCTGCCATTTCGCCACAAACGCAGACACAAAAGGTGCCCATGCTGACGCCTCGTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR CAA 90 bp AATGTCGGACATGATGTGTACCAGCCAGCGGTTCTGGATGGGCGCCCCATAGAGGAGACCGTGTGGTACTaGAGCGGGTGGCAGACAGCG +
Preference number: 3 (lower is better)
Translates to: NVGHDVYQPAVLDGRPIEETVWY*SGWQTA
Trigger: CGCTGTCTGCCACCCGCTCAAGTACCACACGGTCTC...CTCTATGGGGCGCCCATCCAGAACCGCTGGCTGGTACACATCATGTCCGACATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR TCA 72 bp CGAAATGGCAGCGCCAGCTGGGCTGTGAGACAGAGCTaGGAACACCTCCTCTCATACCCGCAGAGCTGCAGT +
Preference number: 3 (lower is better)
Translates to: RNGSASWAVRQS*EHLLSYPQSCS
Trigger: ACTGCAGCTCTGCGGGTATGAGAGGAGGTGTTCTCAGCTCTGTCTCACAGCCCAGCTGGCGCTGCCATTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR TCA 72 bp TGCGTTTGTGGCGAAATGGCAGCGCCAGCTGGGCTGTaGGACAGAGCTGAGAACACCTCCTCTCATACCCGC +
Preference number: 3 (lower is better)
Translates to: CVCGEMAAPAGL*DRAENTSSHTR
Trigger: GCGGGTATGAGAGGAGGTGTTCTCAGCTCTGTCTCACAGCCCAGCTGGCGCTGCCATTTCGCCACAAACGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR CCA 72 bp AGGCGTCAGCATGGGCACCTTTTGTGTCTGCGTTTGTaGCGAAATGGCAGCGCCAGCTGGGCTGTGAGACAG +
Preference number: 3 (lower is better)
Translates to: RRQHGHLLCLRL*RNGSASWAVRQ
Trigger: CTGTCTCACAGCCCAGCTGGCGCTGCCATTTCGCCACAAACGCAGACACAAAAGGTGCCCATGCTGACGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR TCA 72 bp AACACTTACAATGACTTTCCGGGTGCGGGCTGGGTATaGGACCGTGTGGTACTTGAGCGGGTGGCAGACAGC +
Preference number: 3 (lower is better)
Translates to: NTYNDFPGAGWV*DRVVLERVADS
Trigger: GCTGTCTGCCACCCGCTCAAGTACCACACGGTCTCATACCCAGCCCGCACCCGGAAAGTCATTGTAAGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR TCA 72 bp TGTTCAGAAGGGCTAGCATGTTGGCAATGTCGGACATaGTGTGTACCAGCCAGCGGTTCTGGATGGGCGCCC +
Preference number: 3 (lower is better)
Translates to: CSEGLACWQCRT*CVPASGSGWAP
Trigger: GGGCGCCCATCCAGAACCGCTGGCTGGTACACATCATGTCCGACATTGCCAACATGCTAGCCCTTCTGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR TCA 72 bp AGGGAGGTGAGGGAATCTGCTTACCATTCCACTCAATaGGCATACGCCCTGGGGAGCGTGGGAGATGGGAGA +
Preference number: 3 (lower is better)
Translates to: REVRESAYHSTQ*AYALGSVGDGR
Trigger: TCTCCCATCTCCCACGCTCCCCAGGGCGTATGCTCATTGAGTGGAATGGTAAGCAGATTCCCTCACCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR GCA 72 bp CTTCTGGCACTTGAAGAAAGCCTTGAGCGTGGCGGCTaGCATGGTGCGGAACCGCTTGCTGATGAAGCAGTA +
Preference number: 3 (lower is better)
Translates to: LLALEESLERGG*HGAEPLADEAV
Trigger: TACTGCTTCATCAGCAAGCGGTTCCGCACCATGGCAGCCGCCACGCTCAAGGCTTTCTTCAAGTGCCAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR CCA 72 bp AGCCATGTGCGTCAAAGGGCAGACGAGGCGTCAGCATaGGCACCTTTTGTGTCTGCGTTTGTGGCGAAATGG +
Preference number: 3 (lower is better)
Translates to: SHVRQRADEASA*APFVSAFVAKW
Trigger: CCATTTCGCCACAAACGCAGACACAAAAGGTGCCCATGCTGACGCCTCGTCTGCCCTTTGACGCACATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR CAA 90 bp AATGTCGGACATGATGTGTACCAGCCAGCGGTTCTGGATGGGCGCCCCATAGAGCCACGGAGACGAAAATaGCTCTTCCTCCTGAGCTTG +
Preference number: 3 (lower is better)
Translates to: NVGHDVYQPAVLDGRPIEPRRRK*LFLLSL
Trigger: CAAGCTCAGGAGGAAGAGCAATTTTCGTCTCCGTGG...CTCTATGGGGCGCCCATCCAGAACCGCTGGCTGGTACACATCATGTCCGACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR TCA 72 bp AGCTATGTGCTACTGGGGCTTGGTAAGTCCCATAAATaGAGGGTTCCCAGTGACTGTGGATGGTACCAGGGC +
Preference number: 3 (lower is better)
Translates to: SYVLLGLGKSHK*RVPSDCGWYQG
Trigger: GCCCTGGTACCATCCACAGTCACTGGGAACCCTTCATTTATGGGACTTACCAAGCCCCAGTAGCACATAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR GCA 72 bp CTCAGCTCTCGGAAGAAGAGTGCAGGCTCAGCTATGTaGTACTGGGGCTTGGTAAGTCCCATAAATGAAGGG +
Preference number: 3 (lower is better)
Translates to: LSSRKKSAGSAM*YWGLVSPINEG
Trigger: CCCTTCATTTATGGGACTTACCAAGCCCCAGTAGCACATAGCTGAGCCTGCACTCTTCTTCCGAGAGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR CCA 72 bp TCTCGGAAGAAGAGTGCAGGCTCAGCTATGTGCTACTaGGGCTTGGTAAGTCCCATAAATGAAGGGTTCCCA +
Preference number: 3 (lower is better)
Translates to: SRKKSAGSAMCY*GLVSPINEGFP
Trigger: TGGGAACCCTTCATTTATGGGACTTACCAAGCCCCAGTAGCACATAGCTGAGCCTGCACTCTTCTTCCGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR CAA 90 bp CAGGGATGCCCCTATTCATTACATCCTAGAAATGTTCTTGCCTTGGACAGGCAACAGCATGGGCACCTTTaGTGTCTGCGTTTGTGGCGA +
Preference number: 3 (lower is better)
Translates to: QGCPYSLHPRNVLALDRQQHGHL*CLRLWR
Trigger: TCGCCACAAACGCAGACACAAAAGGTGCCCATGCTG...TTGCCTGTCCAAGGCAAGAACATTTCTAGGATGTAATGAATAGGGGCATCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR TCA 72 bp TTTGTCATACTGGTACACCAGCATCTTGATGCAGTGTaGGTTTGCCGGCGAGATCCAGGGGCTACTTGTTAT +
Preference number: 3 (lower is better)
Translates to: FVILVHQHLDAV*VCRRDPGATCY
Trigger: ATAACAAGTAGCCCCTGGATCTCGCCGGCAAACTCACACTGCATCAAGATGCTGGTGTACCAGTATGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR TCA 72 bp AGATGGGAGATCTGTCCCTCAGTCAGACGACTTCCATaGACTTCTTTGAGTGGAAGCATCTTGATGCACCAG +
Preference number: 3 (lower is better)
Translates to: RWEICPSVRRLP*TSLSGSILMHQ
Trigger: CTGGTGCATCAAGATGCTTCCACTCAAAGAAGTTCATGGAAGTCGTCTGACTGAGGGACAGATCTCCCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR GCA 72 bp TCTCTTCTCATCTACCAGTCTGAGAATTGCCCAGTCTaGGGGAGACAGGAAATCGGATTAGCACTCTTAAGG +
Preference number: 3 (lower is better)
Translates to: SLLIYQSENCPV*GRQEIGLALLR
Trigger: CCTTAAGAGTGCTAATCCGATTTCCTGTCTCCCGCAGACTGGGCAATTCTCAGACTGGTAGATGAGAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR TCA 72 bp CAAGAAGCAATTTTGAGTAACGGGATCGTATGCAGCTaGCACAGGGATGGGTTGAAACAATGGCAAGTGTGG +
Preference number: 3 (lower is better)
Translates to: QEAILSNGIVCS*HRDGLKQWQVW
Trigger: CCACACTTGCCATTGTTTCAACCCATCCCTGTGTCAGCTGCATACGATCCCGTTACTCAAAATTGCTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR GCA 72 bp TATGAAAAAGAGGACCAAGATGTCGGCAGCAGCGAGTaGCAAGAGATAGTTGTAGGAGGACTTCTGTCTTCT +
Preference number: 3 (lower is better)
Translates to: YEKEDQDVGSSE*QEIVVGGLLSS
Trigger: AGAAGACAGAAGTCCTCCTACAACTATCTCTTGGCACTCGCTGCTGCCGACATCTTGGTCCTCTTTTTCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR GCA 72 bp TTTCCAATAGCAGGGTGTTTGCAACACACAAGTTCGTaGCCACTCCGGTCTGTCTTTTATGGTTTGTCTGTC +
Preference number: 3 (lower is better)
Translates to: FPIAGCLQHTSS*PLRSVFYGLSV
Trigger: GACAGACAAACCATAAAAGACAGACCGGAGTGGGCACGAACTTGTGTGTTGCAAACACCCTGCTATTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR CCA 72 bp ATTAGCACTCTTAAGGAGAGCTGCTCAGCCATAGGATaGGACACCTTCCCATCTGGAAATGGATTAGACAGA +
Preference number: 3 (lower is better)
Translates to: ISTLKESCSAIG*DTFPSGNGLDR
Trigger: TCTGTCTAATCCATTTCCAGATGGGAAGGTGTCCCATCCTATGGCTGAGCAGCTCTCCTTAAGAGTGCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR CCA 72 bp CAGCTATGCGGGTTTGGAGATTTCCTGAAGAAGCTCTaGCCACAGTTTGGATGGGATCCAATACTCTTCTAT +
Preference number: 3 (lower is better)
Translates to: QLCGFGDFLKKL*PQFGWDPILFY
Trigger: ATAGAAGAGTATTGGATCCCATCCAAACTGTGGCCAGAGCTTCTTCAGGAAATCTCCAAACCCGCATAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR CCA 72 bp TACAAAGGATCTGGGTTAAATAGCTTTACCAAGAACTaGCACCCCCTTTTGAGCCATGTGCGTCAAAGGGCA +
Preference number: 3 (lower is better)
Translates to: YKGSGLNSFTKN*HPLLSHVRQRA
Trigger: TGCCCTTTGACGCACATGGCTCAAAAGGGGGTGCCAGTTCTTGGTAAAGCTATTTAACCCAGATCCTTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR CAA 90 bp CAGGGATGCCCCTATTCATTACATCCTAGAAATGTTCTTGCCTTGGACAGGCAAATGTGCTACTGGGGCTaGGTAAGTCCCATAAATGAA +
Preference number: 3 (lower is better)
Translates to: QGCPYSLHPRNVLALDRQMCYWG*VSPINE
Trigger: TTCATTTATGGGACTTACCAAGCCCCAGTAGCACAT...TTGCCTGTCCAAGGCAAGAACATTTCTAGGATGTAATGAATAGGGGCATCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR TCA 72 bp GAGAATTCCAGCACTTCTATGATCTTGTCGGGGACCTaGGGCATCTGCATGTTCAAGATGAAATCTTCCAAC +
Preference number: 3 (lower is better)
Translates to: ENSSTSMILSGT*GICMFKMKSSN
Trigger: GTTGGAAGATTTCATCTTGAACATGCAGATGCCTCAGGTCCCCGACAAGATCATAGAAGTGCTGGAATTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR TCA 72 bp CCCCATGTTGAACCAGGAGGTACCAAATGTGCAAAGTaGTCTTTTCCAATAGCAGGGTGTTTGCAACACACA +
Preference number: 3 (lower is better)
Translates to: PHVEPGGTKCAK*SFPIAGCLQHT
Trigger: TGTGTGTTGCAAACACCCTGCTATTGGAAAAGATCACTTTGCACATTTGGTACCTCCTGGTTCAACATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR CCA 72 bp GTTTGGAGATTTCCTGAAGAAGCTCTGGCCACAGTTTaGATGGGATCCAATACTCTTCTATTCCCACAGTGT +
Preference number: 3 (lower is better)
Translates to: VWRFPEEALATV*MGSNTLLFPQC
Trigger: ACACTGTGGGAATAGAAGAGTATTGGATCCCATCCAAACTGTGGCCAGAGCTTCTTCAGGAAATCTCCAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR TCA 72 bp AGAGTCTTTTATTCACTTCGGGTAGGCTCCCCATGTTaGACCAGGAGGTACCAAATGTGCAAAGTGATCTTT +
Preference number: 3 (lower is better)
Translates to: RVFYSLRVGSPC*TRRYQMCKVIF
Trigger: AAAGATCACTTTGCACATTTGGTACCTCCTGGTTCAACATGGGGAGCCTACCCGAAGTGAATAAAAGACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR CAA 90 bp ATAGGATGGGACACCTTCCCATCTGGAAATGGATTAGACAGAGGCAGTAGTTGCTCACTGTCAAGATATTaGCTGAATGCTTTCTTCTGT +
Preference number: 3 (lower is better)
Translates to: IGWDTFPSGNGLDRGSSCSLSRY*LNAFFC
Trigger: ACAGAAGAAAGCATTCAGCAAATATCTTGACAGTGA...GCAACTACTGCCTCTGTCTAATCCATTTCCAGATGGGAAGGTGTCCCATCCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR-3UTR CAA 90 bp TCATCATTGCAATGTCCAACCAAGGACACAAATCATATAGCAAGAGAGAAGCTAGACTACTTCTCTACTTaGTGTCCTAACTGGTCACAG +
Preference number: 3 (lower is better)
Translates to: SSLQCPTKDTNHIAREKLDYFST*CPNWSQ
Trigger: CTGTGACCAGTTAGGACACAAAGTAGAGAAGTAGTC...TAGCTTCTCTCTTGCTATATGATTTGTGTCCTTGGTTGGACATTGCAATGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR CCA 72 bp GCCCCTATTCATTACATCCTAGAAATGTTCTTGCCTTaGACAGGCAAGGGTAGAATAAATAAACACACTTAT +
Preference number: 3 (lower is better)
Translates to: APIHYILEMFLP*TGKGRINKHTY
Trigger: ATAAGTGTGTTTATTTATTCTACCCTTGCCTGTCCAAGGCAAGAACATTTCTAGGATGTAATGAATAGGGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR TCA 72 bp TCAGATACATTAGAATCACACAATATGGTCCCTAAATaGGAGCCAATTCTGTCTTGTCATCAACCAGAGAAA +
Preference number: 3 (lower is better)
Translates to: SDTLESHNMVPK*EPILSCHQPEK
Trigger: TTTCTCTGGTTGATGACAAGACAGAATTGGCTCTCATTTAGGGACCATATTGTGTGATTCTAATGTATCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR-3UTR CAA 90 bp AGAAGTAATAAATTAAAGTGTCTGAGGAAAATGTTCCCAATGCACACCCAGTTTTGTAGATATTGCACTTaGACTCATTCATGTGTAGCT +
Preference number: 3 (lower is better)
Translates to: RSNKLKCLRKMFPMHTQFCRYCT*THSCVA
Trigger: AGCTACACATGAATGAGTCAAAGTGCAATATCTACA...AAACTGGGTGTGCATTGGGAACATTTTCCTCAGACACTTTAATTTATTACTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR TCA 72 bp TCCAATGCTAGAGAAAAACTTAGCTGTGTTAGGTTTTaGAAGCAATGGAATATAATCTCCAACATGGCTCTT +
Preference number: 3 (lower is better)
Translates to: SNAREKLSCVRF*KQWNIISNMAL
Trigger: AAGAGCCATGTTGGAGATTATATTCCATTGCTTTCAAAACCTAACACAGCTAAGTTTTTCTCTAGCATTGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR GCA 72 bp ATTCTCAAAAAGGAATTGCTTAACCTTTGTAGATATTaGACTTTGACTCATTCATGTGTAGCTCAAACTAGC +
Preference number: 3 (lower is better)
Translates to: ILKKELLNLCRY*TLTHSCVAQTS
Trigger: GCTAGTTTGAGCTACACATGAATGAGTCAAAGTGCAATATCTACAAAGGTTAAGCAATTCCTTTTTGAGAAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp GAAGAAAGCCTTGAGCGTGGCGGCTGCCATGGTGCGGAACCGCTTGCTGATGAACGTGCGTGTGCTCCATaGGCGCGCCCCTCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: EESLERGGCHGAEPLADERACAP*ARPSLP
Trigger: GGGGAGCGAGGGGCGCGCTCATGGAGCACACGCACG...TTCATCAGCAAGCGGTTCCGCACCATGGCAGCCGCCACGCTCAAGGCTTTCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR GCA 90 bp CCCCTTTTGAGCCATGTGCGTCAAAGGGCAGACGAGGCGTCAGCATGGGCACCTAGGTGGGCGTGCGTGTaGTCCATGAGCGCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: PLLSHVRQRADEASAWAPRWACV*SMSAPL
Trigger: GAGGGGCGCGCTCATGGAGCACACGCACGCCCACCT...AGGTGCCCATGCTGACGCCTCGTCTGCCCTTTGACGCACATGGCTCAAAAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR GCA 90 bp CAGCTGGGCTGTGAGACAGAGCTGAGAACACCTCCTCTCATACCCGCAGAGCTGGGCCGTGATCCCCTCTaGTCGCTCCGCACCTGCCCG +
Preference number: 4 (lower is better)
Translates to: QLGCETELRTPPLIPAELGRDPL*SLRTCP
Trigger: CGGGCAGGTGCGGAGCGAGCAGAGGGGATCACGGCC...CAGCTCTGCGGGTATGAGAGGAGGTGTTCTCAGCTCTGTCTCACAGCCCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp GGCAATGTCGGACATGATGTGTACCAGCCAGCGGTTCTGGATGGGCGCCCCATAGGTCACTGGTGGGGCTaGGCAAGCAGACCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: GNVGHDVYQPAVLDGRPIGHWWG*ASRPPS
Trigger: GGAGGGCGGTCTGCTTGCTCAGCCCCACCAGTGACC...TATGGGGCGCCCATCCAGAACCGCTGGCTGGTACACATCATGTCCGACATTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR GCA 90 bp GAAGAAGATGGAGCAGGGCACCAGGTAGACGGTGAAGCAGTGGATCCAGATGAGGCTTCGCGCCCGGCCTaGCAGCCCGACTCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: EEDGAGHQVDGEAVDPDEASRPA*QPDSGR
Trigger: GCGACCAGAGTCGGGCTGGCAGGCCGGGCGCGAAGC...CTCATCTGGATCCACTGCTTCACCGTCTACCTGGTGCCCTGCTCCATCTTCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR GCA 90 bp GGCAATGTCGGACATGATGTGTACCAGCCAGCGGTTCTGGATGGGCGCCCCATAAGGTGGGCGTGCGTGTaGTCCATGAGCGCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: GNVGHDVYQPAVLDGRPIRWACV*SMSAPL
Trigger: GAGGGGCGCGCTCATGGAGCACACGCACGCCCACCT...TATGGGGCGCCCATCCAGAACCGCTGGCTGGTACACATCATGTCCGACATTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR CCA 90 bp TTCTGGCACTTGAAGAAAGCCTTGAGCGTGGCGGCTGCCATGGTGCGGAACCGCGCCAGCGGTTCTGGATaGGCGCCCCATAGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: FWHLKKALSVAAAMVRNRASGSG*APHRGG
Trigger: ACCACCTCTATGGGGCGCCCATCCAGAACCGCTGGC...GCGGTTCCGCACCATGGCAGCCGCCACGCTCAAGGCTTTCTTCAAGTGCCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR TCA 90 bp CCCCTTTTGAGCCATGTGCGTCAAAGGGCAGACGAGGCGTCAGCATGGGCACCTAGACCGTGTGGTACTTaGGCGGGTGGCAGACAGCGA +
Preference number: 4 (lower is better)
Translates to: PLLSHVRQRADEASAWAPRPCGT*AGGRQR
Trigger: TCGCTGTCTGCCACCCGCTCAAGTACCACACGGTCT...AGGTGCCCATGCTGACGCCTCGTCTGCCCTTTGACGCACATGGCTCAAAAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp CCCCTTTTGAGCCATGTGCGTCAAAGGGCAGACGAGGCGTCAGCATGGGCACCTGGGGAGCGTGGGAGATaGGAGATCTGTCCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: PLLSHVRQRADEASAWAPGERGR*EICPSV
Trigger: GACTGAGGGACAGATCTCCCATCTCCCACGCTCCCC...AGGTGCCCATGCTGACGCCTCGTCTGCCCTTTGACGCACATGGCTCAAAAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR GCA 90 bp AGAAGGGCTAGCATGTTGGCAATGTCGGACATGATGTGTACCAGCCAGCGGTTCGCTGCGAGGTGGGCGTaGGTGTGCTCCATGAGCGCG +
Preference number: 4 (lower is better)
Translates to: RRASMLAMSDMMCTSQRFAARWA*VCSMSA
Trigger: CGCGCTCATGGAGCACACGCACGCCCACCTCGCAGC...GAACCGCTGGCTGGTACACATCATGTCCGACATTGCCAACATGCTAGCCCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR GCA 90 bp CACCAGGTAGACGGTGAAGCAGTGGATCCAGATGAGGACGTGATGCACAGAGGTCAGCGAGCTGTTGGCTaGGAGGTGGGCGTGCGTGTG +
Preference number: 4 (lower is better)
Translates to: HQVDGEAVDPDEDVMHRGQRAVG*EVGVRV
Trigger: CACACGCACGCCCACCTCGCAGCCAACAGCTCGCTG...ACCTCTGTGCATCACGTCCTCATCTGGATCCACTGCTTCACCGTCTACCTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
3UTR CAA 72 bp ACGAGGCGTCAGCATGGGCACCTTTTGTGTCTGCGTTaGTGGCGAAATGGCAGCGCCAGCTGGGCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: TRRQHGHLLCLR*WRNGSASWAVR
Trigger: TCTCACAGCCCAGCTGGCGCTGCCATTTCGCCACAAACGCAGACACAAAAGGTGCCCATGCTGACGCCTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR CAA 72 bp GTCAAAGGGCAGACGAGGCGTCAGCATGGGCACCTTTaGTGTCTGCGTTTGTGGCGAAATGGCAGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: VKGQTRRQHGHL*CLRLWRNGSAS
Trigger: GCTGGCGCTGCCATTTCGCCACAAACGCAGACACAAAAGGTGCCCATGCTGACGCCTCGTCTGCCCTTTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp CCCCGTGGAGTAGCCACGGAGACGAAAATTGCTCTTCCTCCTGAGCTTGTACACCTGTTGGCTGCGAGGTaGGCGTGCGTGTGCTCCATG +
Preference number: 4 (lower is better)
Translates to: PRGVATETKIALPPELVHLLAAR*ACVCSM
Trigger: CATGGAGCACACGCACGCCCACCTCGCAGCCAACAG...GTGTACAAGCTCAGGAGGAAGAGCAATTTTCGTCTCCGTGGCTACTCCACGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR CCA 90 bp CTCGAGAATTCCTCCTTTCCCCCTGCGCACCAGGCAGGGTCTTTGTTTTGGAGGGCGTTTGTGGCGAAATaGCAGCGCCAGCTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LENSSFPPAHQAGSLFWRAFVAK*QRQLGC
Trigger: ACAGCCCAGCTGGCGCTGCCATTTCGCCACAAACGC...CCTCCAAAACAAAGACCCTGCCTGGTGCGCAGGGGGAAAGGAGGAATTCTCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR GCA 90 bp CCCCTTTTGAGCCATGTGCGTCAAAGGGCAGACGAGGCGTCAGCATGGGCACCTTACCAGTCTGAGAATTaGCCAGTCTGCGGGAGACAG +
Preference number: 4 (lower is better)
Translates to: PLLSHVRQRADEASAWAPYQSEN*PVCGRQ
Trigger: CTGTCTCCCGCAGACTGGGCAATTCTCAGACTGGTA...AGGTGCCCATGCTGACGCCTCGTCTGCCCTTTGACGCACATGGCTCAAAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp CTTAAGGAGAGCTGCTCAGCCATAGGATGGGACACCTTCCCATCTGGAAATGGACTCTCCCCGCAGGACTaGCTCCTACCCTTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: LKESCSAIGWDTFPSGNGLSPQD*LLPLAV
Trigger: CACGGCCAAGGGTAGGAGCCAGTCCTGCGGGGAGAG...TCCATTTCCAGATGGGAAGGTGTCCCATCCTATGGCTGAGCAGCTCTCCTTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp TTTCCTGAAGAAGCTCTGGCCACAGTTTGGATGGGATCCAATACTCTTCTATTCCGTGCGTGTGCTCCATaGGCGCGCCCCTCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: FPEEALATVWMGSNTLLFRACAP*ARPSLP
Trigger: GGGGAGCGAGGGGCGCGCTCATGGAGCACACGCACG...GAATAGAAGAGTATTGGATCCCATCCAAACTGTGGCCAGAGCTTCTTCAGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR GCA 90 bp TTTCCTGAAGAAGCTCTGGCCACAGTTTGGATGGGATCCAATACTCTTCTATTCGCTTCGCGCCCGGCCTaGCAGCCCGACTCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: FPEEALATVWMGSNTLLFASRPA*QPDSGR
Trigger: GCGACCAGAGTCGGGCTGGCAGGCCGGGCGCGAAGC...GAATAGAAGAGTATTGGATCCCATCCAAACTGTGGCCAGAGCTTCTTCAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp ACCCCAGGTTTGAGGTCACAGCTATGCGGGTTTGGAGATTTCCTGAAGAAGCTCCTGTTGGCTGCGAGGTaGGCGTGCGTGTGCTCCATG +
Preference number: 4 (lower is better)
Translates to: TPGLRSQLCGFGDFLKKLLLAAR*ACVCSM
Trigger: CATGGAGCACACGCACGCCCACCTCGCAGCCAACAG...GAGCTTCTTCAGGAAATCTCCAAACCCGCATAGCTGTGACCTCAAACCTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp CAGCTGGGCTGTGAGACAGAGCTGAGAACACCTCCTCTCATACCCGCAGAGCTGCCCAGTGACTGTGGATaGTACCAGGGCGAAATCACA +
Preference number: 4 (lower is better)
Translates to: QLGCETELRTPPLIPAELPSDCG*YQGEIT
Trigger: TGTGATTTCGCCCTGGTACCATCCACAGTCACTGGG...CAGCTCTGCGGGTATGAGAGGAGGTGTTCTCAGCTCTGTCTCACAGCCCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR CAA 72 bp AACTGTACAGGTTGCTTCTGGCACTTGAAGAAAGCCTaGAGCGTGGCGGCTGCCATGGTGCGGAACCGCTTG +
Preference number: 4 (lower is better)
Translates to: NCTGCFWHLKKA*SVAAAMVRNRL
Trigger: CAAGCGGTTCCGCACCATGGCAGCCGCCACGCTCAAGGCTTTCTTCAAGTGCCAGAAGCAACCTGTACAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR TCA 90 bp GAAGAAAGCCTTGAGCGTGGCGGCTGCCATGGTGCGGAACCGCTTGCTGATGAAATTCCAGCACTTCTATaGTCTTGTCGGGGACCTGAG +
Preference number: 4 (lower is better)
Translates to: EESLERGGCHGAEPLADEIPALL*SCRGPE
Trigger: CTCAGGTCCCCGACAAGATCATAGAAGTGCTGGAAT...TTCATCAGCAAGCGGTTCCGCACCATGGCAGCCGCCACGCTCAAGGCTTTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR TCA 90 bp CACCAGGTAGACGGTGAAGCAGTGGATCCAGATGAGGACGTGATGCACAGAGGTAGCAGTGGATCCAGATaGGGACGTGATGCACAGAGG +
Preference number: 4 (lower is better)
Translates to: HQVDGEAVDPDEDVMHRGSSGSR*GRDAQR
Trigger: CCTCTGTGCATCACGTCCTCATCTGGATCCACTGCT...ACCTCTGTGCATCACGTCCTCATCTGGATCCACTGCTTCACCGTCTACCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR TCA 90 bp CTCGAGAATTCCTCCTTTCCCCCTGCGCACCAGGCAGGGTCTTTGTTTTGGAGGGTAGGCTCCCCATGTTaGACCAGGAGGTACCAAATG +
Preference number: 4 (lower is better)
Translates to: LENSSFPPAHQAGSLFWRVGSPC*TRRYQM
Trigger: CATTTGGTACCTCCTGGTTCAACATGGGGAGCCTAC...CCTCCAAAACAAAGACCCTGCCTGGTGCGCAGGGGGAAAGGAGGAATTCTCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR GCA 90 bp GATGGAGGTAATGGTGAACAAGATGGCGGTGGTCTTCCCCGTGGAGTAGCCACGGTCGGCAGCAGCGAGTaGCAAGAGATAGTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: DGGNGEQDGGGLPRGVATVGSSE*QEIVVG
Trigger: TCCTACAACTATCTCTTGGCACTCGCTGCTGCCGAC...CGTGGCTACTCCACGGGGAAGACCACCGCCATCTTGTTCACCATTACCTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR GCA 90 bp CAAGAACTGGCACCCCCTTTTGAGCCATGTGCGTCAAAGGGCAGACGAGGCGTCACTCTTAAGGAGAGCTaGTCAGCCATAGGATGGGAC +
Preference number: 4 (lower is better)
Translates to: QELAPPFEPCASKGRRGVTLKES*SAIGWD
Trigger: GTCCCATCCTATGGCTGAGCAGCTCTCCTTAAGAGT...GACGCCTCGTCTGCCCTTTGACGCACATGGCTCAAAAGGGGGTGCCAGTTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR GCA 90 bp CAGCTGGGCTGTGAGACAGAGCTGAGAACACCTCCTCTCATACCCGCAGAGCTGCTCTCGGAAGAAGAGTaGAGGCTCAGCTATGTGCTA +
Preference number: 4 (lower is better)
Translates to: QLGCETELRTPPLIPAELLSEEE*RLSYVL
Trigger: TAGCACATAGCTGAGCCTGCACTCTTCTTCCGAGAG...CAGCTCTGCGGGTATGAGAGGAGGTGTTCTCAGCTCTGTCTCACAGCCCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp AGAAGGGCTAGCATGTTGGCAATGTCGGACATGATGTGTACCAGCCAGCGGTTCGGGTATGAGACCGTGTaGTACTTGAGCGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RRASMLAMSDMMCTSQRFGYETV*YLSGWQ
Trigger: CTGCCACCCGCTCAAGTACCACACGGTCTCATACCC...GAACCGCTGGCTGGTACACATCATGTCCGACATTGCCAACATGCTAGCCCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR CCA 90 bp AAAAAGACACAGCATGGTGGTGCGTATCATCATTGCAATGTCCAACCAAGGACAGCCCGCCTGGAGTCTTaGCTCAGCCCTCCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: KKTQHGGAYHHCNVQPRTARLES*LSPPAG
Trigger: CCCTGCGGGAGGGCTGAGCCAAGACTCCAGGCGGGC...TGTCCTTGGTTGGACATTGCAATGATGATACGCACCACCATGCTGTGTCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp CCCCTTTTGAGCCATGTGCGTCAAAGGGCAGACGAGGCGTCAGCATGGGCACCTAGCTTTACCAAGAACTaGCACCCCCTTTTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: PLLSHVRQRADEASAWAPSFTKN*HPLLSH
Trigger: ATGGCTCAAAAGGGGGTGCCAGTTCTTGGTAAAGCT...AGGTGCCCATGCTGACGCCTCGTCTGCCCTTTGACGCACATGGCTCAAAAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp CCCCGTGGAGTAGCCACGGAGACGAAAATTGCTCTTCCTCCTGAGCTTGTACACATCCAGATGAGGACGTaGTGCACAGAGGTGCTGATG +
Preference number: 4 (lower is better)
Translates to: PRGVATETKIALPPELVHIQMRT*CTEVLM
Trigger: CATCAGCACCTCTGTGCATCACGTCCTCATCTGGAT...GTGTACAAGCTCAGGAGGAAGAGCAATTTTCGTCTCCGTGGCTACTCCACGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR GCA 90 bp CAGGGATGCCCCTATTCATTACATCCTAGAAATGTTCTTGCCTTGGACAGGCAACAGCGAGCTGTTGGCTaGGAGGTGGGCGTGCGTGTG +
Preference number: 4 (lower is better)
Translates to: QGCPYSLHPRNVLALDRQQRAVG*EVGVRV
Trigger: CACACGCACGCCCACCTCGCAGCCAACAGCTCGCTG...TTGCCTGTCCAAGGCAAGAACATTTCTAGGATGTAATGAATAGGGGCATCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp ATAGGATGGGACACCTTCCCATCTGGAAATGGATTAGACAGAGGCAGTAGTTGCGCCAGCGGTTCTGGATaGGCGCCCCATAGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: IGWDTFPSGNGLDRGSSCASGSG*APHRGG
Trigger: ACCACCTCTATGGGGCGCCCATCCAGAACCGCTGGC...GCAACTACTGCCTCTGTCTAATCCATTTCCAGATGGGAAGGTGTCCCATCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326571.7
ENST00000570682.2
CDS-3UTR TCA 90 bp CCCCGTGGAGTAGCCACGGAGACGAAAATTGCTCTTCCTCCTGAGCTTGTACACGATGCACAGAGGTGCTaGTGTAGTCTTCAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: PRGVATETKIALPPELVHDAQRC*CSLQSR
Trigger: TCTGGACTGAAGACTACATCAGCACCTCTGTGCATC...GTGTACAAGCTCAGGAGGAAGAGCAATTTTCGTCTCCGTGGCTACTCCACGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR TCA 90 bp AGAAGGGCTAGCATGTTGGCAATGTCGGACATGATGTGTACCAGCCAGCGGTTCCATCTTGATGCAGTGTaGGTTTGCCGGCGAGATCCA +
Preference number: 4 (lower is better)
Translates to: RRASMLAMSDMMCTSQRFHLDAV*VCRRDP
Trigger: TGGATCTCGCCGGCAAACTCACACTGCATCAAGATG...GAACCGCTGGCTGGTACACATCATGTCCGACATTGCCAACATGCTAGCCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR TCA 90 bp AGAGACAGAGAGAAATGCAATTTAAGGGAGGTGAGGGAATCTGCTTACCATTCCTCCTACCCTTGGCCGTaGTCCCCTCTGCTCGCTCCG +
Preference number: 4 (lower is better)
Translates to: RDREKCNLREVRESAYHSSYPWP*SPLLAP
Trigger: CGGAGCGAGCAGAGGGGATCACGGCCAAGGGTAGGA...GGAATGGTAAGCAGATTCCCTCACCTCCCTTAAATTGCATTTCTCTCTGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp CTTAAGGAGAGCTGCTCAGCCATAGGATGGGACACCTTCCCATCTGGAAATGGAATGAAGGGTTCCCAGTaGCTGTGGATGGTACCAGGG +
Preference number: 4 (lower is better)
Translates to: LKESCSAIGWDTFPSGNGMKGSQ*LWMVPG
Trigger: CCCTGGTACCATCCACAGTCACTGGGAACCCTTCAT...TCCATTTCCAGATGGGAAGGTGTCCCATCCTATGGCTGAGCAGCTCTCCTTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR GCA 90 bp CAGCTGGGCTGTGAGACAGAGCTGAGAACACCTCCTCTCATACCCGCAGAGCTGGACACAGCATGGTGGTaGGTATCATCATTGCAATGT +
Preference number: 4 (lower is better)
Translates to: QLGCETELRTPPLIPAELDTAWW*VSSLQC
Trigger: ACATTGCAATGATGATACGCACCACCATGCTGTGTC...CAGCTCTGCGGGTATGAGAGGAGGTGTTCTCAGCTCTGTCTCACAGCCCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp AGAAGGGCTAGCATGTTGGCAATGTCGGACATGATGTGTACCAGCCAGCGGTTCCTTCTTGCCACCAGCTaGGAGAGGATGATCACTGTC +
Preference number: 4 (lower is better)
Translates to: RRASMLAMSDMMCTSQRFLLATS*ERMITV
Trigger: GACAGTGATCATCCTCTCCCAGCTGGTGGCAAGAAG...GAACCGCTGGCTGGTACACATCATGTCCGACATTGCCAACATGCTAGCCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR CCA 90 bp ATAGGATGGGACACCTTCCCATCTGGAAATGGATTAGACAGAGGCAGTAGTTGCCGGTGGTCTTCCCCGTaGAGTAGCCACGGAGACGAA +
Preference number: 4 (lower is better)
Translates to: IGWDTFPSGNGLDRGSSCRWSSP*SSHGDE
Trigger: TTCGTCTCCGTGGCTACTCCACGGGGAAGACCACCG...GCAACTACTGCCTCTGTCTAATCCATTTCCAGATGGGAAGGTGTCCCATCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326571.7
ENST00000570682.2
CDS-3UTR CCA 90 bp CAGCTGGGCTGTGAGACAGAGCTGAGAACACCTCCTCTCATACCCGCAGAGCTGTGTACAGGTTGCTTCTaGCACTTGAAGAAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: QLGCETELRTPPLIPAELCTGCF*HLKKAL
Trigger: CAAGGCTTTCTTCAAGTGCCAGAAGCAACCTGTACA...CAGCTCTGCGGGTATGAGAGGAGGTGTTCTCAGCTCTGTCTCACAGCCCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp CTCGAGAATTCCTCCTTTCCCCCTGCGCACCAGGCAGGGTCTTTGTTTTGGAGGTTCCTGAAGAAGCTCTaGCCACAGTTTGGATGGGAT +
Preference number: 4 (lower is better)
Translates to: LENSSFPPAHQAGSLFWRFLKKL*PQFGWD
Trigger: ATCCCATCCAAACTGTGGCCAGAGCTTCTTCAGGAA...CCTCCAAAACAAAGACCCTGCCTGGTGCGCAGGGGGAAAGGAGGAATTCTCGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR CAA 72 bp GGGTTAAATAGCTTTACCAAGAACTGGCACCCCCTTTaGAGCCATGTGCGTCAAAGGGCAGACGAGGCGTCA +
Preference number: 4 (lower is better)
Translates to: GLNSFTKNWHPL*SHVRQRADEAS
Trigger: TGACGCCTCGTCTGCCCTTTGACGCACATGGCTCAAAAGGGGGTGCCAGTTCTTGGTAAAGCTATTTAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp CTTAAGGAGAGCTGCTCAGCCATAGGATGGGACACCTTCCCATCTGGAAATGGAATCTTGTCGGGGACCTaGGGCATCTGCATGTTCAAG +
Preference number: 4 (lower is better)
Translates to: LKESCSAIGWDTFPSGNGILSGT*GICMFK
Trigger: CTTGAACATGCAGATGCCTCAGGTCCCCGACAAGAT...TCCATTTCCAGATGGGAAGGTGTCCCATCCTATGGCTGAGCAGCTCTCCTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp GGGGATGCTGGTCAGGAAGCAGGTGATGTAAACACTTACAATGACTTTCCGGGTTGGCAATGTCGGACATaGTGTGTACCAGCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: GDAGQEAGDVNTYNDFPGWQCRT*CVPASG
Trigger: ACCGCTGGCTGGTACACATCATGTCCGACATTGCCA...ACCCGGAAAGTCATTGTAAGTGTTTACATCACCTGCTTCCTGACCAGCATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR GCA 90 bp GACCTGAGGCATCTGCATGTTCAAGATGAAATCTTCCAACAGGAAGTCCACAAACTTGAGCGTGGCGGCTaGCATGGTGCGGAACCGCTT +
Preference number: 4 (lower is better)
Translates to: DLRHLHVQDEIFQQEVHKLERGG*HGAEPL
Trigger: AAGCGGTTCCGCACCATGGCAGCCGCCACGCTCAAG...TTTGTGGACTTCCTGTTGGAAGATTTCATCTTGAACATGCAGATGCCTCAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR GCA 90 bp AGAGACAGAGAGAAATGCAATTTAAGGGAGGTGAGGGAATCTGCTTACCATTCCCTTGAGCGTGGCGGCTaGCATGGTGCGGAACCGCTT +
Preference number: 4 (lower is better)
Translates to: RDREKCNLREVRESAYHSLERGG*HGAEPL
Trigger: AAGCGGTTCCGCACCATGGCAGCCGCCACGCTCAAG...GGAATGGTAAGCAGATTCCCTCACCTCCCTTAAATTGCATTTCTCTCTGTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp AATGTCGGACATGATGTGTACCAGCCAGCGGTTCTGGATGGGCGCCCCATAGAGATCCATATGGAGGTGTaGATGGATGAGAATTCCAGC +
Preference number: 4 (lower is better)
Translates to: NVGHDVYQPAVLDGRPIEIHMEV*MDENSS
Trigger: GCTGGAATTCTCATCCATCCACACCTCCATATGGAT...CTCTATGGGGCGCCCATCCAGAACCGCTGGCTGGTACACATCATGTCCGACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR CCA 90 bp CTCGAGAATTCCTCCTTTCCCCCTGCGCACCAGGCAGGGTCTTTGTTTTGGAGGACAGCTATGCGGGTTTaGAGATTTCCTGAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: LENSSFPPAHQAGSLFWRTAMRV*RFPEEA
Trigger: AGCTTCTTCAGGAAATCTCCAAACCCGCATAGCTGT...CCTCCAAAACAAAGACCCTGCCTGGTGCGCAGGGGGAAAGGAGGAATTCTCGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp GACCTGAGGCATCTGCATGTTCAAGATGAAATCTTCCAACAGGAAGTCCACAAAAGACCGTGTGGTACTTaGGCGGGTGGCAGACAGCGA +
Preference number: 4 (lower is better)
Translates to: DLRHLHVQDEIFQQEVHKRPCGT*AGGRQR
Trigger: TCGCTGTCTGCCACCCGCTCAAGTACCACACGGTCT...TTTGTGGACTTCCTGTTGGAAGATTTCATCTTGAACATGCAGATGCCTCAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR TCA 90 bp AGAGACAGAGAGAAATGCAATTTAAGGGAGGTGAGGGAATCTGCTTACCATTCCGGTGCGGGCTGGGTATaGGACCGTGTGGTACTTGAG +
Preference number: 4 (lower is better)
Translates to: RDREKCNLREVRESAYHSGAGWV*DRVVLE
Trigger: CTCAAGTACCACACGGTCTCATACCCAGCCCGCACC...GGAATGGTAAGCAGATTCCCTCACCTCCCTTAAATTGCATTTCTCTCTGTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp ATAGGATGGGACACCTTCCCATCTGGAAATGGATTAGACAGAGGCAGTAGTTGCAGCAGTGGATCCAGATaGGGACGTGATGCACAGAGG +
Preference number: 4 (lower is better)
Translates to: IGWDTFPSGNGLDRGSSCSSGSR*GRDAQR
Trigger: CCTCTGTGCATCACGTCCTCATCTGGATCCACTGCT...GCAACTACTGCCTCTGTCTAATCCATTTCCAGATGGGAAGGTGTCCCATCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326571.7
ENST00000570682.2
CDS-3UTR TCA 90 bp ATCTTTTCCAATAGCAGGGTGTTTGCAACACACAAGTTCGTGCCCACTCCGGTCCATCTTGATGCAGTGTaGGTTTGCCGGCGAGATCCA +
Preference number: 4 (lower is better)
Translates to: IFSNSRVFATHKFVPTPVHLDAV*VCRRDP
Trigger: TGGATCTCGCCGGCAAACTCACACTGCATCAAGATG...GACCGGAGTGGGCACGAACTTGTGTGTTGCAAACACCCTGCTATTGGAAAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp TGCTACTGGGGCTTGGTAAGTCCCATAAATGAAGGGTTCCCAGTGACTGTGGATGACACAGGGATGGGTTaGAACAATGGCAAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: CYWGLVSPINEGFPVTVDDTGMG*NNGKCG
Trigger: CCCACACTTGCCATTGTTTCAACCCATCCCTGTGTC...ATCCACAGTCACTGGGAACCCTTCATTTATGGGACTTACCAAGCCCCAGTAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp CTTAAGGAGAGCTGCTCAGCCATAGGATGGGACACCTTCCCATCTGGAAATGGAGCAGGGTTGGCAACTTaGCACGTAAAAAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LKESCSAIGWDTFPSGNGAGLAT*HVKRLL
Trigger: GAGAAGCCTTTTTACGTGTCAAGTTGCCAACCCTGC...TCCATTTCCAGATGGGAAGGTGTCCCATCCTATGGCTGAGCAGCTCTCCTTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR GCA 90 bp ACCCCAGGTTTGAGGTCACAGCTATGCGGGTTTGGAGATTTCCTGAAGAAGCTCGACAGAGGCAGTAGTTaGCACACCTATGGAATCACG +
Preference number: 4 (lower is better)
Translates to: TPGLRSQLCGFGDFLKKLDRGSS*HTYGIT
Trigger: CGTGATTCCATAGGTGTGGCAACTACTGCCTCTGTC...GAGCTTCTTCAGGAAATCTCCAAACCCGCATAGCTGTGACCTCAAACCTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp AAATCTTCCAACAGGAAGTCCACAAACACTATGAAAAAGAGGACCAAGATGTCGCTCTCCCCGCAGGACTaGCTCCTACCCTTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: KSSNRKSTNTMKKRTKMSLSPQD*LLPLAV
Trigger: CACGGCCAAGGGTAGGAGCCAGTCCTGCGGGGAGAG...CGACATCTTGGTCCTCTTTTTCATAGTGTTTGTGGACTTCCTGTTGGAAGATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR CCA 90 bp CTGTCAATGGTTAACGGTACAGTAATCCATATGGAGGTGTGGATGGATGAGAATAAGACAGCGAGCTGTTaGCTGCGAGGTGGGCGTGCG +
Preference number: 4 (lower is better)
Translates to: LSMVNGTVIHMEVWMDENKTASC*LRGGRA
Trigger: CGCACGCCCACCTCGCAGCCAACAGCTCGCTGTCTT...ATTCTCATCCATCCACACCTCCATATGGATTACTGTACCGTTAACCATTGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR CCA 90 bp GAAGAAGATGGAGCAGGGCACCAGGTAGACGGTGAAGCAGTGGATCCAGATGAGTGTACAGGTTGCTTCTaGCACTTGAAGAAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: EEDGAGHQVDGEAVDPDECTGCF*HLKKAL
Trigger: CAAGGCTTTCTTCAAGTGCCAGAAGCAACCTGTACA...CTCATCTGGATCCACTGCTTCACCGTCTACCTGGTGCCCTGCTCCATCTTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR CCA 90 bp AGAAGGGCTAGCATGTTGGCAATGTCGGACATGATGTGTACCAGCCAGCGGTTCGGACACCTTCCCATCTaGAAATGGATTAGACAGAGG +
Preference number: 4 (lower is better)
Translates to: RRASMLAMSDMMCTSQRFGHLPI*KWIRQR
Trigger: CCTCTGTCTAATCCATTTCCAGATGGGAAGGTGTCC...GAACCGCTGGCTGGTACACATCATGTCCGACATTGCCAACATGCTAGCCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR CCA 90 bp ATAGGATGGGACACCTTCCCATCTGGAAATGGATTAGACAGAGGCAGTAGTTGCTTGTGTCTGCGTTTGTaGCGAAATGGCAGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: IGWDTFPSGNGLDRGSSCLCLRL*RNGSAS
Trigger: GCTGGCGCTGCCATTTCGCCACAAACGCAGACACAA...GCAACTACTGCCTCTGTCTAATCCATTTCCAGATGGGAAGGTGTCCCATCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp CTCGAGAATTCCTCCTTTCCCCCTGCGCACCAGGCAGGGTCTTTGTTTTGGAGGGAAATGTTCTTGCCTTaGACAGGCAAGGGTAGAATA +
Preference number: 4 (lower is better)
Translates to: LENSSFPPAHQAGSLFWREMFLP*TGKGRI
Trigger: TATTCTACCCTTGCCTGTCCAAGGCAAGAACATTTC...CCTCCAAAACAAAGACCCTGCCTGGTGCGCAGGGGGAAAGGAGGAATTCTCGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp CCCCTTTTGAGCCATGTGCGTCAAAGGGCAGACGAGGCGTCAGCATGGGCACCTAGTATAGGTAGCCTTTaGTCAATGTCCATTCATAAG +
Preference number: 4 (lower is better)
Translates to: PLLSHVRQRADEASAWAPSIGSL*SMSIHK
Trigger: CTTATGAATGGACATTGACCAAAGGCTACCTATACT...AGGTGCCCATGCTGACGCCTCGTCTGCCCTTTGACGCACATGGCTCAAAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp CAGCTGGGCTGTGAGACAGAGCTGAGAACACCTCCTCTCATACCCGCAGAGCTGATGGAGCAGAGAGCATaGAGAGTCACATACATATTT +
Preference number: 4 (lower is better)
Translates to: QLGCETELRTPPLIPAELMEQRA*RVTYIF
Trigger: AAATATGTATGTGACTCTCCATGCTCTCTGCTCCAT...CAGCTCTGCGGGTATGAGAGGAGGTGTTCTCAGCTCTGTCTCACAGCCCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR CAA 72 bp AAGAAGTTGATGGCTGTGTTCAGAAGGGCTAGCATGTaGGCAATGTCGGACATGATGTGTACCAGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: KKLMAVFRRASM*AMSDMMCTSQR
Trigger: CCGCTGGCTGGTACACATCATGTCCGACATTGCCAACATGCTAGCCCTTCTGAACACAGCCATCAACTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR TCA 90 bp CTCGAGAATTCCTCCTTTCCCCCTGCGCACCAGGCAGGGTCTTTGTTTTGGAGGAGTCCACAAACACTATaGAAAAGAGGACCAAGATGT +
Preference number: 4 (lower is better)
Translates to: LENSSFPPAHQAGSLFWRSPQTL*KRGPRC
Trigger: ACATCTTGGTCCTCTTTTTCATAGTGTTTGTGGACT...CCTCCAAAACAAAGACCCTGCCTGGTGCGCAGGGGGAAAGGAGGAATTCTCGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp CTGTCAATGGTTAACGGTACAGTAATCCATATGGAGGTGTGGATGGATGAGAATGGTGCGGGCTGGGTATaGGACCGTGTGGTACTTGAG +
Preference number: 4 (lower is better)
Translates to: LSMVNGTVIHMEVWMDENGAGWV*DRVVLE
Trigger: CTCAAGTACCACACGGTCTCATACCCAGCCCGCACC...ATTCTCATCCATCCACACCTCCATATGGATTACTGTACCGTTAACCATTGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR TCA 90 bp GGGGATGCTGGTCAGGAAGCAGGTGATGTAAACACTTACAATGACTTTCCGGGTTGTAAACACTTACAATaGCTTTCCGGGTGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: GDAGQEAGDVNTYNDFPGCKHLQ*LSGCGL
Trigger: CAGCCCGCACCCGGAAAGTCATTGTAAGTGTTTACA...ACCCGGAAAGTCATTGTAAGTGTTTACATCACCTGCTTCCTGACCAGCATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR TCA 90 bp CAGGGATGCCCCTATTCATTACATCCTAGAAATGTTCTTGCCTTGGACAGGCAATGGCAATGTCGGACATaGTGTGTACCAGCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: QGCPYSLHPRNVLALDRQWQCRT*CVPASG
Trigger: ACCGCTGGCTGGTACACATCATGTCCGACATTGCCA...TTGCCTGTCCAAGGCAAGAACATTTCTAGGATGTAATGAATAGGGGCATCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp CCATTTTTGTCATACTGGTACACCAGCATCTTGATGCAGTGTGAGTTTGCCGGCGGTACACCAGCATCTTaGTGCAGTGTGAGTTTGCCG +
Preference number: 4 (lower is better)
Translates to: PFLSYWYTSILMQCEFAGGTPAS*CSVSLP
Trigger: CGGCAAACTCACACTGCATCAAGATGCTGGTGTACC...GCCGGCAAACTCACACTGCATCAAGATGCTGGTGTACCAGTATGACAAAAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR TCA 90 bp TTGTGTCCTAACTGGTCACAGGATGATGACACAAGCTCCAATGGCATCTTCAAAACTGGCACCCCCTTTTaGGCCATGTGCGTCAAAGGG +
Preference number: 4 (lower is better)
Translates to: LCPNWSQDDDTSSNGIFKTGTPF*AMCVKG
Trigger: CCCTTTGACGCACATGGCTCAAAAGGGGGTGCCAGT...TTTGAAGATGCCATTGGAGCTTGTGTCATCATCCTGTGACCAGTTAGGACACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp CTTAAGGAGAGCTGCTCAGCCATAGGATGGGACACCTTCCCATCTGGAAATGGAGTCAGACGACTTCCATaGACTTCTTTGAGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: LKESCSAIGWDTFPSGNGVRRLP*TSLSGS
Trigger: GCTTCCACTCAAAGAAGTTCATGGAAGTCGTCTGAC...TCCATTTCCAGATGGGAAGGTGTCCCATCCTATGGCTGAGCAGCTCTCCTTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR GCA 90 bp TCATCATTGCAATGTCCAACCAAGGACACAAATCATATAGCAAGAGAGAAGCTATGCTCGCTCCGCACCTaGCCGCCTGGAGTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SSLQCPTKDTNHIAREKLCSLRT*PPGVLA
Trigger: AGCCAAGACTCCAGGCGGGCAGGTGCGGAGCGAGCA...TAGCTTCTCTCTTGCTATATGATTTGTGTCCTTGGTTGGACATTGCAATGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR GCA 90 bp CCCCTTTTGAGCCATGTGCGTCAAAGGGCAGACGAGGCGTCAGCATGGGCACCTTTTTTGAGGATCTTTTaGAAAGGTAACTTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: PLLSHVRQRADEASAWAPFLRIF*KGNFGS
Trigger: AGAGCCAAAGTTACCTTTGCAAAAGATCCTCAAAAA...AGGTGCCCATGCTGACGCCTCGTCTGCCCTTTGACGCACATGGCTCAAAAGGGG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp TTTCCTGAAGAAGCTCTGGCCACAGTTTGGATGGGATCCAATACTCTTCTATTCGGGTATGAGACCGTGTaGTACTTGAGCGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: FPEEALATVWMGSNTLLFGYETV*YLSGWQ
Trigger: CTGCCACCCGCTCAAGTACCACACGGTCTCATACCC...GAATAGAAGAGTATTGGATCCCATCCAAACTGTGGCCAGAGCTTCTTCAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp TGCTACTGGGGCTTGGTAAGTCCCATAAATGAAGGGTTCCCAGTGACTGTGGATCTTCAGTCCAGATGTTaGGCCACCAGTAATAGGGGA +
Preference number: 4 (lower is better)
Translates to: CYWGLVSPINEGFPVTVDLQSRC*ATSNRG
Trigger: TCCCCTATTACTGGTGGCCCAACATCTGGACTGAAG...ATCCACAGTCACTGGGAACCCTTCATTTATGGGACTTACCAAGCCCCAGTAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp CAAGAACTGGCACCCCCTTTTGAGCCATGTGCGTCAAAGGGCAGACGAGGCGTCAGGGGCTACTTGTTATaGAAAAGTTATGATTGGTGT +
Preference number: 4 (lower is better)
Translates to: QELAPPFEPCASKGRRGVRGYLL*KSYDWC
Trigger: ACACCAATCATAACTTTTCCATAACAAGTAGCCCCT...GACGCCTCGTCTGCCCTTTGACGCACATGGCTCAAAAGGGGGTGCCAGTTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp AGTTTGGCAAATTTATTCCAAAACAGGGATGAATTCGAATACTGGGAATCTGAGCCGCACCTGCCCGCCTaGAGTCTTGGCTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: SLANLFQNRDEFEYWESEPHLPA*SLGSAL
Trigger: GAGGGCTGAGCCAAGACTCCAGGCGGGCAGGTGCGG...CTCAGATTCCCAGTATTCGAATTCATCCCTGTTTTGGAATAAATTTGCCAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp ACCCCAGGTTTGAGGTCACAGCTATGCGGGTTTGGAGATTTCCTGAAGAAGCTCTCAGCTATGTGCTACTaGGGCTTGGTAAGTCCCATA +
Preference number: 4 (lower is better)
Translates to: TPGLRSQLCGFGDFLKKLSAMCY*GLVSPI
Trigger: TATGGGACTTACCAAGCCCCAGTAGCACATAGCTGA...GAGCTTCTTCAGGAAATCTCCAAACCCGCATAGCTGTGACCTCAAACCTGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp CTTAAGGAGAGCTGCTCAGCCATAGGATGGGACACCTTCCCATCTGGAAATGGAGCTCTGGCCACAGTTTaGATGGGATCCAATACTCTT +
Preference number: 4 (lower is better)
Translates to: LKESCSAIGWDTFPSGNGALATV*MGSNTL
Trigger: AAGAGTATTGGATCCCATCCAAACTGTGGCCAGAGC...TCCATTTCCAGATGGGAAGGTGTCCCATCCTATGGCTGAGCAGCTCTCCTTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp AGAGACAGAGAGAAATGCAATTTAAGGGAGGTGAGGGAATCTGCTTACCATTCCGACGAGGCGTCAGCATaGGCACCTTTTGTGTCTGCG +
Preference number: 4 (lower is better)
Translates to: RDREKCNLREVRESAYHSDEASA*APFVSA
Trigger: CGCAGACACAAAAGGTGCCCATGCTGACGCCTCGTC...GGAATGGTAAGCAGATTCCCTCACCTCCCTTAAATTGCATTTCTCTCTGTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp CTTAAGGAGAGCTGCTCAGCCATAGGATGGGACACCTTCCCATCTGGAAATGGAGGGTTTGTGTTGCCATaGGGCCTTTTCTTATCCCAT +
Preference number: 4 (lower is better)
Translates to: LKESCSAIGWDTFPSGNGGFVLP*GLFLSH
Trigger: ATGGGATAAGAAAAGGCCCCATGGCAACACAAACCC...TCCATTTCCAGATGGGAAGGTGTCCCATCCTATGGCTGAGCAGCTCTCCTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR CAA 72 bp GGTTTTCCATTTTTGTCATACTGGTACACCAGCATCTaGATGCAGTGTGAGTTTGCCGGCGAGATCCAGGGG +
Preference number: 4 (lower is better)
Translates to: GFPFLSYWYTSI*MQCEFAGEIQG
Trigger: CCCCTGGATCTCGCCGGCAAACTCACACTGCATCAAGATGCTGGTGTACCAGTATGACAAAAATGGAAAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR TCA 90 bp CCAGTAATAGGGGATGCTGGTCAGGAAGCAGGTGATGTAAACACTTACAATGACATCTTGTCGGGGACCTaGGGCATCTGCATGTTCAAG +
Preference number: 4 (lower is better)
Translates to: PVIGDAGQEAGDVNTYNDILSGT*GICMFK
Trigger: CTTGAACATGCAGATGCCTCAGGTCCCCGACAAGAT...GTCATTGTAAGTGTTTACATCACCTGCTTCCTGACCAGCATCCCCTATTACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR TCA 90 bp CAGGGATGCCCCTATTCATTACATCCTAGAAATGTTCTTGCCTTGGACAGGCAAGCTGTGAGACAGAGCTaGGAACACCTCCTCTCATAC +
Preference number: 4 (lower is better)
Translates to: QGCPYSLHPRNVLALDRQAVRQS*EHLLSY
Trigger: GTATGAGAGGAGGTGTTCTCAGCTCTGTCTCACAGC...TTGCCTGTCCAAGGCAAGAACATTTCTAGGATGTAATGAATAGGGGCATCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp ATCTTTTCCAATAGCAGGGTGTTTGCAACACACAAGTTCGTGCCCACTCCGGTCTCATTTCCTTCCCCATaGGACATTTCAGCCGTCAAG +
Preference number: 4 (lower is better)
Translates to: IFSNSRVFATHKFVPTPVSFPSP*DISAVK
Trigger: CTTGACGGCTGAAATGTCTCATGGGGAAGGAAATGA...GACCGGAGTGGGCACGAACTTGTGTGTTGCAAACACCCTGCTATTGGAAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp ATTGGTGTAGAACTGTACAGGTTGCTTCTGGCACTTGAAGAAAGCCTTGAGCGTTGGTACTTGAGCGGGTaGCAGACAGCGATATACCTG +
Preference number: 4 (lower is better)
Translates to: IGVELYRLLLALEESLERWYLSG*QTAIYL
Trigger: CAGGTATATCGCTGTCTGCCACCCGCTCAAGTACCA...ACGCTCAAGGCTTTCTTCAAGTGCCAGAAGCAACCTGTACAGTTCTACACCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR CCA 90 bp CAGGGATGCCCCTATTCATTACATCCTAGAAATGTTCTTGCCTTGGACAGGCAATGGTACTTGAGCGGGTaGCAGACAGCGATATACCTG +
Preference number: 4 (lower is better)
Translates to: QGCPYSLHPRNVLALDRQWYLSG*QTAIYL
Trigger: CAGGTATATCGCTGTCTGCCACCCGCTCAAGTACCA...TTGCCTGTCCAAGGCAAGAACATTTCTAGGATGTAATGAATAGGGGCATCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp TCCAGGGGCTACTTGTTATGGAAAAGTTATGATTGGTGTAGAACTGTACAGGTTCGGTGGTCTTCCCCGTaGAGTAGCCACGGAGACGAA +
Preference number: 4 (lower is better)
Translates to: SRGYLLWKSYDWCRTVQVRWSSP*SSHGDE
Trigger: TTCGTCTCCGTGGCTACTCCACGGGGAAGACCACCG...AACCTGTACAGTTCTACACCAATCATAACTTTTCCATAACAAGTAGCCCCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR CCA 90 bp CAGCTGGGCTGTGAGACAGAGCTGAGAACACCTCCTCTCATACCCGCAGAGCTGTGGAAAAGTTATGATTaGTGTAGAACTGTACAGGTT +
Preference number: 4 (lower is better)
Translates to: QLGCETELRTPPLIPAELWKSYD*CRTVQV
Trigger: AACCTGTACAGTTCTACACCAATCATAACTTTTCCA...CAGCTCTGCGGGTATGAGAGGAGGTGTTCTCAGCTCTGTCTCACAGCCCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp CAGGGATGCCCCTATTCATTACATCCTAGAAATGTTCTTGCCTTGGACAGGCAATGCTCAGCCATAGGATaGGACACCTTCCCATCTGGA +
Preference number: 4 (lower is better)
Translates to: QGCPYSLHPRNVLALDRQCSAIG*DTFPSG
Trigger: TCCAGATGGGAAGGTGTCCCATCCTATGGCTGAGCA...TTGCCTGTCCAAGGCAAGAACATTTCTAGGATGTAATGAATAGGGGCATCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp CAGCTGGGCTGTGAGACAGAGCTGAGAACACCTCCTCTCATACCCGCAGAGCTGATCAACCTAACCCAATaGGCATTCATTTGCATTTTA +
Preference number: 4 (lower is better)
Translates to: QLGCETELRTPPLIPAELINLTQ*AFICIL
Trigger: TAAAATGCAAATGAATGCCCATTGGGTTAGGTTGAT...CAGCTCTGCGGGTATGAGAGGAGGTGTTCTCAGCTCTGTCTCACAGCCCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp AGAGACAGAGAGAAATGCAATTTAAGGGAGGTGAGGGAATCTGCTTACCATTCCGGTACACCAGCATCTTaGTGCAGTGTGAGTTTGCCG +
Preference number: 4 (lower is better)
Translates to: RDREKCNLREVRESAYHSGTPAS*CSVSLP
Trigger: CGGCAAACTCACACTGCATCAAGATGCTGGTGTACC...GGAATGGTAAGCAGATTCCCTCACCTCCCTTAAATTGCATTTCTCTCTGTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp AGAGACAGAGAGAAATGCAATTTAAGGGAGGTGAGGGAATCTGCTTACCATTCCTCTCATCTACCAGTCTaGGAATTGCCCAGTCTGCGG +
Preference number: 4 (lower is better)
Translates to: RDREKCNLREVRESAYHSSHLPV*ELPSLR
Trigger: CCGCAGACTGGGCAATTCTCAGACTGGTAGATGAGA...GGAATGGTAAGCAGATTCCCTCACCTCCCTTAAATTGCATTTCTCTCTGTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR GCA 90 bp AAAAAGACACAGCATGGTGGTGCGTATCATCATTGCAATGTCCAACCAAGGACAGAGAATTGCCCAGTCTaGGGGAGACAGGAAATCGGA +
Preference number: 4 (lower is better)
Translates to: KKTQHGGAYHHCNVQPRTENCPV*GRQEIG
Trigger: TCCGATTTCCTGTCTCCCGCAGACTGGGCAATTCTC...TGTCCTTGGTTGGACATTGCAATGATGATACGCACCACCATGCTGTGTCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR GCA 90 bp TTGTGTCCTAACTGGTCACAGGATGATGACACAAGCTCCAATGGCATCTTCAAAGCAGGCTCAGCTATGTaGTACTGGGGCTTGGTAAGT +
Preference number: 4 (lower is better)
Translates to: LCPNWSQDDDTSSNGIFKAGSAM*YWGLVS
Trigger: ACTTACCAAGCCCCAGTAGCACATAGCTGAGCCTGC...TTTGAAGATGCCATTGGAGCTTGTGTCATCATCCTGTGACCAGTTAGGACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp TGCTACTGGGGCTTGGTAAGTCCCATAAATGAAGGGTTCCCAGTGACTGTGGATATCCATATGGAGGTGTaGATGGATGAGAATTCCAGC +
Preference number: 4 (lower is better)
Translates to: CYWGLVSPINEGFPVTVDIHMEV*MDENSS
Trigger: GCTGGAATTCTCATCCATCCACACCTCCATATGGAT...ATCCACAGTCACTGGGAACCCTTCATTTATGGGACTTACCAAGCCCCAGTAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp ATTGGTGTAGAACTGTACAGGTTGCTTCTGGCACTTGAAGAAAGCCTTGAGCGTCTTCAGTCCAGATGTTaGGCCACCAGTAATAGGGGA +
Preference number: 4 (lower is better)
Translates to: IGVELYRLLLALEESLERLQSRC*ATSNRG
Trigger: TCCCCTATTACTGGTGGCCCAACATCTGGACTGAAG...ACGCTCAAGGCTTTCTTCAAGTGCCAGAAGCAACCTGTACAGTTCTACACCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR CCA 90 bp AGAAGGGCTAGCATGTTGGCAATGTCGGACATGATGTGTACCAGCCAGCGGTTCCCATTTTTGTCATACTaGTACACCAGCATCTTGATG +
Preference number: 4 (lower is better)
Translates to: RRASMLAMSDMMCTSQRFPFLSY*YTSILM
Trigger: CATCAAGATGCTGGTGTACCAGTATGACAAAAATGG...GAACCGCTGGCTGGTACACATCATGTCCGACATTGCCAACATGCTAGCCCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR TCA 90 bp CCAGTAATAGGGGATGCTGGTCAGGAAGCAGGTGATGTAAACACTTACAATGACCCAGCTGGGAGAGGATaGTCACTGTCAAGATATTTG +
Preference number: 4 (lower is better)
Translates to: PVIGDAGQEAGDVNTYNDPAGRG*SLSRYL
Trigger: CAAATATCTTGACAGTGATCATCCTCTCCCAGCTGG...GTCATTGTAAGTGTTTACATCACCTGCTTCCTGACCAGCATCCCCTATTACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR TCA 90 bp GTGTTCAGAAGGGCTAGCATGTTGGCAATGTCGGACATGATGTGTACCAGCCAGAGTCCACAAACACTATaGAAAAGAGGACCAAGATGT +
Preference number: 4 (lower is better)
Translates to: VFRRASMLAMSDMMCTSQSPQTL*KRGPRC
Trigger: ACATCTTGGTCCTCTTTTTCATAGTGTTTGTGGACT...CTGGCTGGTACACATCATGTCCGACATTGCCAACATGCTAGCCCTTCTGAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR TCA 90 bp AAAAAGACACAGCATGGTGGTGCGTATCATCATTGCAATGTCCAACCAAGGACAATTCCAGCACTTCTATaGTCTTGTCGGGGACCTGAG +
Preference number: 4 (lower is better)
Translates to: KKTQHGGAYHHCNVQPRTIPALL*SCRGPE
Trigger: CTCAGGTCCCCGACAAGATCATAGAAGTGCTGGAAT...TGTCCTTGGTTGGACATTGCAATGATGATACGCACCACCATGCTGTGTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp AAAAAGACACAGCATGGTGGTGCGTATCATCATTGCAATGTCCAACCAAGGACATGTAAACACTTACAATaGCTTTCCGGGTGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: KKTQHGGAYHHCNVQPRTCKHLQ*LSGCGL
Trigger: CAGCCCGCACCCGGAAAGTCATTGTAAGTGTTTACA...TGTCCTTGGTTGGACATTGCAATGATGATACGCACCACCATGCTGTGTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp CAGGGATGCCCCTATTCATTACATCCTAGAAATGTTCTTGCCTTGGACAGGCAAGGTAAGTCCCATAAATaGAGGGTTCCCAGTGACTGT +
Preference number: 4 (lower is better)
Translates to: QGCPYSLHPRNVLALDRQGKSHK*RVPSDC
Trigger: ACAGTCACTGGGAACCCTTCATTTATGGGACTTACC...TTGCCTGTCCAAGGCAAGAACATTTCTAGGATGTAATGAATAGGGGCATCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp ACCCCAGGTTTGAGGTCACAGCTATGCGGGTTTGGAGATTTCCTGAAGAAGCTCATTCCAAAACAGGGATaGATTCGAATACTGGGAATC +
Preference number: 4 (lower is better)
Translates to: TPGLRSQLCGFGDFLKKLIPKQG*IRILGI
Trigger: GATTCCCAGTATTCGAATTCATCCCTGTTTTGGAAT...GAGCTTCTTCAGGAAATCTCCAAACCCGCATAGCTGTGACCTCAAACCTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR GCA 90 bp GACCTGAGGCATCTGCATGTTCAAGATGAAATCTTCCAACAGGAAGTCCACAAAGACAGAGGCAGTAGTTaGCACACCTATGGAATCACG +
Preference number: 4 (lower is better)
Translates to: DLRHLHVQDEIFQQEVHKDRGSS*HTYGIT
Trigger: CGTGATTCCATAGGTGTGGCAACTACTGCCTCTGTC...TTTGTGGACTTCCTGTTGGAAGATTTCATCTTGAACATGCAGATGCCTCAGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR GCA 90 bp AAAAAGACACAGCATGGTGGTGCGTATCATCATTGCAATGTCCAACCAAGGACAGGCACCTTTTGTGTCTaGGTTTGTGGCGAAATGGCA +
Preference number: 4 (lower is better)
Translates to: KKTQHGGAYHHCNVQPRTGTFCV*VCGEMA
Trigger: TGCCATTTCGCCACAAACGCAGACACAAAAGGTGCC...TGTCCTTGGTTGGACATTGCAATGATGATACGCACCACCATGCTGTGTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR GCA 90 bp AGAGACAGAGAGAAATGCAATTTAAGGGAGGTGAGGGAATCTGCTTACCATTCCCAACACACAAGTTCGTaGCCACTCCGGTCTGTCTTT +
Preference number: 4 (lower is better)
Translates to: RDREKCNLREVRESAYHSQHTSS*PLRSVF
Trigger: AAAGACAGACCGGAGTGGGCACGAACTTGTGTGTTG...GGAATGGTAAGCAGATTCCCTCACCTCCCTTAAATTGCATTTCTCTCTGTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp CTGTCAATGGTTAACGGTACAGTAATCCATATGGAGGTGTGGATGGATGAGAATTGCTCAGCCATAGGATaGGACACCTTCCCATCTGGA +
Preference number: 4 (lower is better)
Translates to: LSMVNGTVIHMEVWMDENCSAIG*DTFPSG
Trigger: TCCAGATGGGAAGGTGTCCCATCCTATGGCTGAGCA...ATTCTCATCCATCCACACCTCCATATGGATTACTGTACCGTTAACCATTGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR CCA 90 bp ATCTTTTCCAATAGCAGGGTGTTTGCAACACACAAGTTCGTGCCCACTCCGGTCAAAGACACAGCATGGTaGTGCGTATCATCATTGCAA +
Preference number: 4 (lower is better)
Translates to: IFSNSRVFATHKFVPTPVKDTAW*CVSSLQ
Trigger: TTGCAATGATGATACGCACCACCATGCTGTGTCTTT...GACCGGAGTGGGCACGAACTTGTGTGTTGCAAACACCCTGCTATTGGAAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR CAA 72 bp TGGTACCAGGGCGAAATCACAGACTACTTCTCTACTTaGTGTCCTAACTGGTCACAGGATGATGACACAAGC +
Preference number: 4 (lower is better)
Translates to: WYQGEITDYFST*CPNWSQDDDTS
Trigger: GCTTGTGTCATCATCCTGTGACCAGTTAGGACACAAAGTAGAGAAGTAGTCTGTGATTTCGCCCTGGTACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp AAAAAGACACAGCATGGTGGTGCGTATCATCATTGCAATGTCCAACCAAGGACACCAGCTGGGAGAGGATaGTCACTGTCAAGATATTTG +
Preference number: 4 (lower is better)
Translates to: KKTQHGGAYHHCNVQPRTPAGRG*SLSRYL
Trigger: CAAATATCTTGACAGTGATCATCCTCTCCCAGCTGG...TGTCCTTGGTTGGACATTGCAATGATGATACGCACCACCATGCTGTGTCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp CAGGGATGCCCCTATTCATTACATCCTAGAAATGTTCTTGCCTTGGACAGGCAACAGCAGCCATTTACATaGCAGGCTTCAAAGTTCAAG +
Preference number: 4 (lower is better)
Translates to: QGCPYSLHPRNVLALDRQQQPFT*QASKFK
Trigger: CTTGAACTTTGAAGCCTGTCATGTAAATGGCTGCTG...TTGCCTGTCCAAGGCAAGAACATTTCTAGGATGTAATGAATAGGGGCATCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR GCA 90 bp TCTGTCATTCCCCTCATTTCCTTCCCCATGAGACATTTCAGCCGTCAAGTTGTTACTGGTAGGAGCTTTTaGTGTCATTACGACTCTGTG +
Preference number: 4 (lower is better)
Translates to: SVIPLISFPMRHFSRQVVTGRSF*CHYDSV
Trigger: CACAGAGTCGTAATGACAGCAAAAGCTCCTACCAGT...AACAACTTGACGGCTGAAATGTCTCATGGGGAAGGAAATGAGGGGAATGACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR GCA 90 bp AAAGTGTCTGAGGAAAATGTTCCCAATGCACACCCAGTTTTTAAACATCAACAATTCCTCCTTTCCCCCTaGGCACCAGGCAGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: KVSEENVPNAHPVFKHQQFLLSP*APGRVF
Trigger: AAAGACCCTGCCTGGTGCGCAGGGGGAAAGGAGGAA...TTGTTGATGTTTAAAAACTGGGTGTGCATTGGGAACATTTTCCTCAGACACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp TGCTACTGGGGCTTGGTAAGTCCCATAAATGAAGGGTTCCCAGTGACTGTGGATGATGGGTTGAAACAATaGCAAGTGTGGGCTTATTTT +
Preference number: 4 (lower is better)
Translates to: CYWGLVSPINEGFPVTVDDGLKQ*QVWAYF
Trigger: AAAATAAGCCCACACTTGCCATTGTTTCAACCCATC...ATCCACAGTCACTGGGAACCCTTCATTTATGGGACTTACCAAGCCCCAGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR CAA 72 bp TGCAGTGTGAGTTTGCCGGCGAGATCCAGGGGCTACTaGTTATGGAAAAGTTATGATTGGTGTAGAACTGTA +
Preference number: 4 (lower is better)
Translates to: CSVSLPARSRGY*LWKSYDWCRTV
Trigger: TACAGTTCTACACCAATCATAACTTTTCCATAACAAGTAGCCCCTGGATCTCGCCGGCAAACTCACACTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR TCA 90 bp TCATCATTGCAATGTCCAACCAAGGACACAAATCATATAGCAAGAGAGAAGCTAGGGATCGTATGCAGCTaGCACAGGGATGGGTTGAAA +
Preference number: 4 (lower is better)
Translates to: SSLQCPTKDTNHIAREKLGIVCS*HRDGLK
Trigger: TTTCAACCCATCCCTGTGTCAGCTGCATACGATCCC...TAGCTTCTCTCTTGCTATATGATTTGTGTCCTTGGTTGGACATTGCAATGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR GCA 90 bp CAGGGATGCCCCTATTCATTACATCCTAGAAATGTTCTTGCCTTGGACAGGCAAAGCAATTCACTACAGTaGCTTCAAGAATTGGACCTC +
Preference number: 4 (lower is better)
Translates to: QGCPYSLHPRNVLALDRQSNSLQ*LQELDL
Trigger: GAGGTCCAATTCTTGAAGGCACTGTAGTGAATTGCT...TTGCCTGTCCAAGGCAAGAACATTTCTAGGATGTAATGAATAGGGGCATCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR GCA 90 bp ATCTTTTCCAATAGCAGGGTGTTTGCAACACACAAGTTCGTGCCCACTCCGGTCAGGAGGTACCAAATGTaGAAAGTGATCTTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: IFSNSRVFATHKFVPTPVRRYQM*KVIFSN
Trigger: ATTGGAAAAGATCACTTTGCACATTTGGTACCTCCT...GACCGGAGTGGGCACGAACTTGTGTGTTGCAAACACCCTGCTATTGGAAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR GCA 90 bp ACCCCAGGTTTGAGGTCACAGCTATGCGGGTTTGGAGATTTCCTGAAGAAGCTCTCAGCATACTGCAATTaGTTGAACATAGATGCAAAT +
Preference number: 4 (lower is better)
Translates to: TPGLRSQLCGFGDFLKKLSAYCN*LNIDAN
Trigger: ATTTGCATCTATGTTCAAGCAATTGCAGTATGCTGA...GAGCTTCTTCAGGAAATCTCCAAACCCGCATAGCTGTGACCTCAAACCTGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp TCATCATTGCAATGTCCAACCAAGGACACAAATCATATAGCAAGAGAGAAGCTACTTCTTGCCACCAGCTaGGAGAGGATGATCACTGTC +
Preference number: 4 (lower is better)
Translates to: SSLQCPTKDTNHIAREKLLLATS*ERMITV
Trigger: GACAGTGATCATCCTCTCCCAGCTGGTGGCAAGAAG...TAGCTTCTCTCTTGCTATATGATTTGTGTCCTTGGTTGGACATTGCAATGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp CAGGGATGCCCCTATTCATTACATCCTAGAAATGTTCTTGCCTTGGACAGGCAATGGCCACAGTTTGGATaGGATCCAATACTCTTCTAT +
Preference number: 4 (lower is better)
Translates to: QGCPYSLHPRNVLALDRQWPQFG*DPILFY
Trigger: ATAGAAGAGTATTGGATCCCATCCAAACTGTGGCCA...TTGCCTGTCCAAGGCAAGAACATTTCTAGGATGTAATGAATAGGGGCATCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp AAAAAGACACAGCATGGTGGTGCGTATCATCATTGCAATGTCCAACCAAGGACACCGGTCTGTCTTTTATaGTTTGTCTGTCATTCCCCT +
Preference number: 4 (lower is better)
Translates to: KKTQHGGAYHHCNVQPRTPVCLL*FVCHSP
Trigger: AGGGGAATGACAGACAAACCATAAAAGACAGACCGG...TGTCCTTGGTTGGACATTGCAATGATGATACGCACCACCATGCTGTGTCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR CAA 72 bp TATGGAAAAGTTATGATTGGTGTAGAACTGTACAGGTaGCTTCTGGCACTTGAAGAAAGCCTTGAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: YGKVMIGVELYR*LLALEESLERG
Trigger: GCCACGCTCAAGGCTTTCTTCAAGTGCCAGAAGCAACCTGTACAGTTCTACACCAATCATAACTTTTCCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR TCA 90 bp TCATCATTGCAATGTCCAACCAAGGACACAAATCATATAGCAAGAGAGAAGCTAGATGCACAGAGGTGCTaGTGTAGTCTTCAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: SSLQCPTKDTNHIAREKLDAQRC*CSLQSR
Trigger: TCTGGACTGAAGACTACATCAGCACCTCTGTGCATC...TAGCTTCTCTCTTGCTATATGATTTGTGTCCTTGGTTGGACATTGCAATGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp AAAGTGTCTGAGGAAAATGTTCCCAATGCACACCCAGTTTTTAAACATCAACAAATCCAGATGAGGACGTaGTGCACAGAGGTGCTGATG +
Preference number: 4 (lower is better)
Translates to: KVSEENVPNAHPVFKHQQIQMRT*CTEVLM
Trigger: CATCAGCACCTCTGTGCATCACGTCCTCATCTGGAT...TTGTTGATGTTTAAAAACTGGGTGTGCATTGGGAACATTTTCCTCAGACACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp TCTGTCATTCCCCTCATTTCCTTCCCCATGAGACATTTCAGCCGTCAAGTTGTTAACAAGAAGCAATTTTaGGTAACGGGATCGTATGCA +
Preference number: 4 (lower is better)
Translates to: SVIPLISFPMRHFSRQVVNKKQF*VTGSYA
Trigger: TGCATACGATCCCGTTACTCAAAATTGCTTCTTGTT...AACAACTTGACGGCTGAAATGTCTCATGGGGAAGGAAATGAGGGGAATGACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp AGAGACAGAGAGAAATGCAATTTAAGGGAGGTGAGGGAATCTGCTTACCATTCCTCTAGGAAGCTGGAGTaGTACCATAACAAGAAGCAA +
Preference number: 4 (lower is better)
Translates to: RDREKCNLREVRESAYHSSRKLE*YHNKKQ
Trigger: TTGCTTCTTGTTATGGTATCACTCCAGCTTCCTAGA...GGAATGGTAAGCAGATTCCCTCACCTCCCTTAAATTGCATTTCTCTCTGTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR GCA 90 bp ATAGGATGGGACACCTTCCCATCTGGAAATGGATTAGACAGAGGCAGTAGTTGCCTGATGAGATTCTATTaGGATCCTTTAAAAGGGGTA +
Preference number: 4 (lower is better)
Translates to: IGWDTFPSGNGLDRGSSCLMRFY*DPLKGV
Trigger: TACCCCTTTTAAAGGATCGCAATAGAATCTCATCAG...GCAACTACTGCCTCTGTCTAATCCATTTCCAGATGGGAAGGTGTCCCATCCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp AGAGACAGAGAGAAATGCAATTTAAGGGAGGTGAGGGAATCTGCTTACCATTCCACTTTGTGTCCTAACTaGTCACAGGATGATGACACA +
Preference number: 4 (lower is better)
Translates to: RDREKCNLREVRESAYHSTLCPN*SQDDDT
Trigger: TGTGTCATCATCCTGTGACCAGTTAGGACACAAAGT...GGAATGGTAAGCAGATTCCCTCACCTCCCTTAAATTGCATTTCTCTCTGTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp AAAAAGACACAGCATGGTGGTGCGTATCATCATTGCAATGTCCAACCAAGGACAGCTTCTCTAGGAAGCTaGAGTGATACCATAACAAGA +
Preference number: 4 (lower is better)
Translates to: KKTQHGGAYHHCNVQPRTASLGS*SDTITR
Trigger: TCTTGTTATGGTATCACTCCAGCTTCCTAGAGAAGC...TGTCCTTGGTTGGACATTGCAATGATGATACGCACCACCATGCTGTGTCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp CAGGGATGCCCCTATTCATTACATCCTAGAAATGTTCTTGCCTTGGACAGGCAAGATGAATTCGAATACTaGGAATCTGAGGGAGAAGTT +
Preference number: 4 (lower is better)
Translates to: QGCPYSLHPRNVLALDRQDEFEY*ESEGEV
Trigger: AACTTCTCCCTCAGATTCCCAGTATTCGAATTCATC...TTGCCTGTCCAAGGCAAGAACATTTCTAGGATGTAATGAATAGGGGCATCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp GACCTGAGGCATCTGCATGTTCAAGATGAAATCTTCCAACAGGAAGTCCACAAATCTGCATGTTCAAGATaGAATCTTCCAACAGGAAGT +
Preference number: 4 (lower is better)
Translates to: DLRHLHVQDEIFQQEVHKSACSR*NLPTGS
Trigger: ACTTCCTGTTGGAAGATTTCATCTTGAACATGCAGA...TTTGTGGACTTCCTGTTGGAAGATTTCATCTTGAACATGCAGATGCCTCAGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR TCA 90 bp AGAAGTAATAAATTAAAGTGTCTGAGGAAAATGTTCCCAATGCACACCCAGTTTTTTAGACCCCAGGTTTaGGGTCACAGCTATGCGGGT +
Preference number: 4 (lower is better)
Translates to: RSNKLKCLRKMFPMHTQFFRPQV*GHSYAG
Trigger: ACCCGCATAGCTGTGACCTCAAACCTGGGGTCTAAA...AAACTGGGTGTGCATTGGGAACATTTTCCTCAGACACTTTAATTTATTACTTCT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp TTGTGTCCTAACTGGTCACAGGATGATGACACAAGCTCCAATGGCATCTTCAAAAGTAAAAATCCAGCCTaGGGAACTAAATATTCCAGG +
Preference number: 4 (lower is better)
Translates to: LCPNWSQDDDTSSNGIFKSKNPA*GTKYSR
Trigger: CCTGGAATATTTAGTTCCTCAGGCTGGATTTTTACT...TTTGAAGATGCCATTGGAGCTTGTGTCATCATCCTGTGACCAGTTAGGACACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp TTGTGTCCTAACTGGTCACAGGATGATGACACAAGCTCCAATGGCATCTTCAAAAATATGGTCCCTAAATaGGAGCCAATTCTGTCTTGT +
Preference number: 4 (lower is better)
Translates to: LCPNWSQDDDTSSNGIFKNMVPK*EPILSC
Trigger: ACAAGACAGAATTGGCTCTCATTTAGGGACCATATT...TTTGAAGATGCCATTGGAGCTTGTGTCATCATCCTGTGACCAGTTAGGACACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp TTGTGTCCTAACTGGTCACAGGATGATGACACAAGCTCCAATGGCATCTTCAAACTAGTTAACTGTCTTTaGAAGAGGCACCACAAAAAC +
Preference number: 4 (lower is better)
Translates to: LCPNWSQDDDTSSNGIFKLVNCL*KRHHKN
Trigger: GTTTTTGTGGTGCCTCTTTCAAAGACAGTTAACTAG...TTTGAAGATGCCATTGGAGCTTGTGTCATCATCCTGTGACCAGTTAGGACACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR GCA 90 bp AGAAGTAATAAATTAAAGTGTCTGAGGAAAATGTTCCCAATGCACACCCAGTTTGTCGGCAGCAGCGAGTaGCAAGAGATAGTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: RSNKLKCLRKMFPMHTQFVGSSE*QEIVVG
Trigger: TCCTACAACTATCTCTTGGCACTCGCTGCTGCCGAC...AAACTGGGTGTGCATTGGGAACATTTTCCTCAGACACTTTAATTTATTACTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp ATAGGATGGGACACCTTCCCATCTGGAAATGGATTAGACAGAGGCAGTAGTTGCTGGAAAAGTTATGATTaGTGTAGAACTGTACAGGTT +
Preference number: 4 (lower is better)
Translates to: IGWDTFPSGNGLDRGSSCWKSYD*CRTVQV
Trigger: AACCTGTACAGTTCTACACCAATCATAACTTTTCCA...GCAACTACTGCCTCTGTCTAATCCATTTCCAGATGGGAAGGTGTCCCATCCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326571.7
ENST00000570682.2
3UTR CAA 72 bp AGGGATGCCCCTATTCATTACATCCTAGAAATGTTCTaGCCTTGGACAGGCAAGGGTAGAATAAATAAACAC +
Preference number: 4 (lower is better)
Translates to: RDAPIHYILEMF*PWTGKGRINKH
Trigger: GTGTTTATTTATTCTACCCTTGCCTGTCCAAGGCAAGAACATTTCTAGGATGTAATGAATAGGGGCATCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp AAAAAGACACAGCATGGTGGTGCGTATCATCATTGCAATGTCCAACCAAGGACATTCTATTCCATTCTCTaGACTGGAATAGCCAACATT +
Preference number: 4 (lower is better)
Translates to: KKTQHGGAYHHCNVQPRTFYSIL*TGIANI
Trigger: AATGTTGGCTATTCCAGTTCAGAGAATGGAATAGAA...TGTCCTTGGTTGGACATTGCAATGATGATACGCACCACCATGCTGTGTCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR GCA 90 bp AAAGTGTCTGAGGAAAATGTTCCCAATGCACACCCAGTTTTTAAACATCAACAATTGAGGTCACAGCTATaGGGGTTTGGAGATTTCCTG +
Preference number: 4 (lower is better)
Translates to: KVSEENVPNAHPVFKHQQLRSQL*GFGDFL
Trigger: CAGGAAATCTCCAAACCCGCATAGCTGTGACCTCAA...TTGTTGATGTTTAAAAACTGGGTGTGCATTGGGAACATTTTCCTCAGACACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp GACCTGAGGCATCTGCATGTTCAAGATGAAATCTTCCAACAGGAAGTCCACAAAAGGGGCTACTTGTTATaGAAAAGTTATGATTGGTGT +
Preference number: 4 (lower is better)
Translates to: DLRHLHVQDEIFQQEVHKRGYLL*KSYDWC
Trigger: ACACCAATCATAACTTTTCCATAACAAGTAGCCCCT...TTTGTGGACTTCCTGTTGGAAGATTTCATCTTGAACATGCAGATGCCTCAGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR CCA 90 bp AGTTTGGCAAATTTATTCCAAAACAGGGATGAATTCGAATACTGGGAATCTGAGCAGCTGACACAGGGATaGGTTGAAACAATGGCAAGT +
Preference number: 4 (lower is better)
Translates to: SLANLFQNRDEFEYWESEQLTQG*VETMAS
Trigger: ACTTGCCATTGTTTCAACCCATCCCTGTGTCAGCTG...CTCAGATTCCCAGTATTCGAATTCATCCCTGTTTTGGAATAAATTTGCCAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp CAGGGATGCCCCTATTCATTACATCCTAGAAATGTTCTTGCCTTGGACAGGCAACTTTATTGTCAAAACTaGCCTGAAAGAAAAGGCTTA +
Preference number: 4 (lower is better)
Translates to: QGCPYSLHPRNVLALDRQLYCQN*PERKGL
Trigger: TAAGCCTTTTCTTTCAGGCCAGTTTTGACAATAAAG...TTGCCTGTCCAAGGCAAGAACATTTCTAGGATGTAATGAATAGGGGCATCCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp AGTTTGGCAAATTTATTCCAAAACAGGGATGAATTCGAATACTGGGAATCTGAGAATAAAACAATTTGGTaGGGGCCTCAGCAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: SLANLFQNRDEFEYWESENKTIW*GPQQAR
Trigger: CCTTGCTTGCTGAGGCCCTCACCAAATTGTTTTATT...CTCAGATTCCCAGTATTCGAATTCATCCCTGTTTTGGAATAAATTTGCCAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR GCA 90 bp AAAGTGTCTGAGGAAAATGTTCCCAATGCACACCCAGTTTTTAAACATCAACAAGGTGCGTATCATCATTaGAATGTCCAACCAAGGACA +
Preference number: 4 (lower is better)
Translates to: KVSEENVPNAHPVFKHQQGAYHH*NVQPRT
Trigger: TGTCCTTGGTTGGACATTGCAATGATGATACGCACC...TTGTTGATGTTTAAAAACTGGGTGTGCATTGGGAACATTTTCCTCAGACACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp AGAAGTAATAAATTAAAGTGTCTGAGGAAAATGTTCCCAATGCACACCCAGTTTGGACACCTTCCCATCTaGAAATGGATTAGACAGAGG +
Preference number: 4 (lower is better)
Translates to: RSNKLKCLRKMFPMHTQFGHLPI*KWIRQR
Trigger: CCTCTGTCTAATCCATTTCCAGATGGGAAGGTGTCC...AAACTGGGTGTGCATTGGGAACATTTTCCTCAGACACTTTAATTTATTACTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR CAA 72 bp GGAACTAAATATTCCAGGTGGACTGTCTGCCGTTTTTaGGTCACCAAAAATGTCATGCAATTTCAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: GTKYSRWTVCRF*VTKNVMQFQSQ
Trigger: CTGACTTTGAAATTGCATGACATTTTTGGTGACCAAAAAACGGCAGACAGTCCACCTGGAATATTTAGTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp AAAGTGTCTGAGGAAAATGTTCCCAATGCACACCCAGTTTTTAAACATCAACAAATTGAGAGCATTGGCTaGAGTTTAGGGTTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: KVSEENVPNAHPVFKHQQIESIG*SLGFVL
Trigger: CAACACAAACCCTAAACTTCAGCCAATGCTCTCAAT...TTGTTGATGTTTAAAAACTGGGTGTGCATTGGGAACATTTTCCTCAGACACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR GCA 90 bp AGTTTGGCAAATTTATTCCAAAACAGGGATGAATTCGAATACTGGGAATCTGAGAGCAATTTCCAGGGATaGCCCTATTCATTACATCCT +
Preference number: 4 (lower is better)
Translates to: SLANLFQNRDEFEYWESESNFQG*PYSLHP
Trigger: AGGATGTAATGAATAGGGGCATCCCTGGAAATTGCT...CTCAGATTCCCAGTATTCGAATTCATCCCTGTTTTGGAATAAATTTGCCAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp AGTTTGGCAAATTTATTCCAAAACAGGGATGAATTCGAATACTGGGAATCTGAGTCTGCATGTTCAAGATaGAATCTTCCAACAGGAAGT +
Preference number: 4 (lower is better)
Translates to: SLANLFQNRDEFEYWESESACSR*NLPTGS
Trigger: ACTTCCTGTTGGAAGATTTCATCTTGAACATGCAGA...CTCAGATTCCCAGTATTCGAATTCATCCCTGTTTTGGAATAAATTTGCCAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp AGAAGTAATAAATTAAAGTGTCTGAGGAAAATGTTCCCAATGCACACCCAGTTTCAGAGCTGCAGTTCCTaGCCCTTGAATATTAAATTC +
Preference number: 4 (lower is better)
Translates to: RSNKLKCLRKMFPMHTQFQSCSS*PLNIKF
Trigger: GAATTTAATATTCAAGGGTCAGGAACTGCAGCTCTG...AAACTGGGTGTGCATTGGGAACATTTTCCTCAGACACTTTAATTTATTACTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR TCA 90 bp AGAAGTAATAAATTAAAGTGTCTGAGGAAAATGTTCCCAATGCACACCCAGTTTACCAAATGTGCAAAGTaGTCTTTTCCAATAGCAGGG +
Preference number: 4 (lower is better)
Translates to: RSNKLKCLRKMFPMHTQFTKCAK*SFPIAG
Trigger: CCCTGCTATTGGAAAAGATCACTTTGCACATTTGGT...AAACTGGGTGTGCATTGGGAACATTTTCCTCAGACACTTTAATTTATTACTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CCA 90 bp AAAGTGTCTGAGGAAAATGTTCCCAATGCACACCCAGTTTTTAAACATCAACAACCATTTTTGTCATACTaGTACACCAGCATCTTGATG +
Preference number: 4 (lower is better)
Translates to: KVSEENVPNAHPVFKHQQPFLSY*YTSILM
Trigger: CATCAAGATGCTGGTGTACCAGTATGACAAAAATGG...TTGTTGATGTTTAAAAACTGGGTGTGCATTGGGAACATTTTCCTCAGACACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000570682.2
3UTR CAA 72 bp AAAGCAATGGAATATAATCTCCAACATGGCTCTTTTTaGAGGATCTTTTGCAAAGGTAACTTTGGCTCTGTA +
Preference number: 4 (lower is better)
Translates to: KAMEYNLQHGSF*RIFCKGNFGSV
Trigger: TACAGAGCCAAAGTTACCTTTGCAAAAGATCCTCAAAAAAGAGCCATGTTGGAGATTATATTCCATTGCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS GCA 90 bp TCCATGAGCGCGCCCCTCGCTCCCCTTGCCGCTTCGCGCCCGGCCTaGCAGCCCGACTCTGGTCGCCGGCTCGGTGGTGGCGGCGGCGGA +
Preference number: 5 (lower is better)
Translates to: SMSAPLAPLAASRPA*QPDSGRRLGGGGGG
Trigger: TCCGCCGCCGCCACCACCGAGCCGGCGACCAGAGTCGGGCTGGCAGGCCGGGCGCGAAGCGGCAAGGGGAGCGAGGGGCGCGCTCATGGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326571.7
ENST00000570682.2
CDS GCA 90 bp GAGGTGGGCGTGCGTGTGCTCCATGAGCGCGCCCCTCGCTCCCCTTaGCGCTTCGCGCCCGGCCTGCCAGCCCGACTCTGGTCGCCGGCT +
Preference number: 5 (lower is better)
Translates to: EVGVRVLHERAPRSP*RFAPGLPARLWSPA
Trigger: AGCCGGCGACCAGAGTCGGGCTGGCAGGCCGGGCGCGAAGCGGCAAGGGGAGCGAGGGGCGCGCTCATGGAGCACACGCACGCCCACCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326571.7
ENST00000570682.2
CDS GCA 90 bp GCCGCAGGCCGAGCCGGGGGACCACCAAGACAGCGAGCTGTTGGCTaGGAGGTGGGCGTGCGTGTGCTCCATGAGCGCGCCCCTCGCTCC +
Preference number: 5 (lower is better)
Translates to: AAGRAGGPPRQRAVG*EVGVRVLHERAPRS
Trigger: GGAGCGAGGGGCGCGCTCATGGAGCACACGCACGCCCACCTCGCAGCCAACAGCTCGCTGTCTTGGTGGTCCCCCGGCTCGGCCTGCGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326571.7
ENST00000570682.2
CDS TCA 90 bp AAGACAGCGAGCTGTTGGCTGCGAGGTGGGCGTGCGTGTGCTCCATaGGCGCGCCCCTCGCTCCCCTTGCCGCTTCGCGCCCGGCCTGCC +
Preference number: 5 (lower is better)
Translates to: KTASCWLRGGRACAP*ARPSLPLPLRARPA
Trigger: GGCAGGCCGGGCGCGAAGCGGCAAGGGGAGCGAGGGGCGCGCTCATGGAGCACACGCACGCCCACCTCGCAGCCAACAGCTCGCTGTCTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326571.7
ENST00000570682.2
CDS GCA 90 bp GACCACCAAGACAGCGAGCTGTTGGCTGCGAGGTGGGCGTGCGTGTaGTCCATGAGCGCGCCCCTCGCTCCCCTTGCCGCTTCGCGCCCG +
Preference number: 5 (lower is better)
Translates to: DHQDSELLAARWACV*SMSAPLAPLAASRP
Trigger: CGGGCGCGAAGCGGCAAGGGGAGCGAGGGGCGCGCTCATGGAGCACACGCACGCCCACCTCGCAGCCAACAGCTCGCTGTCTTGGTGGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326571.7
ENST00000570682.2
CDS TCA 90 bp CAGCAGCGCCTCTCTCCCCGCAGGACTGGCTCCTACCCTTGGCCGTaGTCCCCTCTGCTCGCTCCGCACCTGCCCGCCTGGAGTCTTGGC +
Preference number: 5 (lower is better)
Translates to: QQRLSPRRTGSYPWP*SPLLAPHLPAWSLG
Trigger: GCCAAGACTCCAGGCGGGCAGGTGCGGAGCGAGCAGAGGGGATCACGGCCAAGGGTAGGAGCCAGTCCTGCGGGGAGAGAGGCGCTGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS CCA 90 bp GAGGCAGCGGCAGCTGGAGCAGCAGCGCCTCTCTCCCCGCAGGACTaGCTCCTACCCTTGGCCGTGATCCCCTCTGCTCGCTCCGCACCT +
Preference number: 5 (lower is better)
Translates to: EAAAAGAAAPLSPQD*LLPLAVIPSARSAP
Trigger: AGGTGCGGAGCGAGCAGAGGGGATCACGGCCAAGGGTAGGAGCCAGTCCTGCGGGGAGAGAGGCGCTGCTGCTCCAGCTGCCGCTGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS GCA 90 bp TCTCTCCCCGCAGGACTGGCTCCTACCCTTGGCCGTGATCCCCTCTaGTCGCTCCGCACCTGCCCGCCTGGAGTCTTGGCTCAGCCCTCC +
Preference number: 5 (lower is better)
Translates to: SLPAGLAPTLGRDPL*SLRTCPPGVLAQPS
Trigger: GGAGGGCTGAGCCAAGACTCCAGGCGGGCAGGTGCGGAGCGAGCAGAGGGGATCACGGCCAAGGGTAGGAGCCAGTCCTGCGGGGAGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CAA 90 bp GGACCAAGATGTCGGCAGCAGCGAGTGCCAAGAGATAGTTGTAGGAGGACTTCTCAAGACAGCGAGCTGTaGGCTGCGAGGTGGGCGTGC +
Preference number: 5 (lower is better)
Translates to: GPRCRQQRVPRDSCRRTSQDSEL*AARWAC
Trigger: GCACGCCCACCTCGCAGCCAACAGCTCGCTGTCTTG...AGAAGTCCTCCTACAACTATCTCTTGGCACTCGCTGCTGCCGACATCTTGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR CAA 90 bp GAAGAAAGCCTTGAGCGTGGCGGCTGCCATGGTGCGGAACCGCTTGCTGATGAACACTTGAAGAAAGCCTaGAGCGTGGCGGCTGCCATG +
Preference number: 5 (lower is better)
Translates to: EESLERGGCHGAEPLADEHLKKA*SVAAAM
Trigger: CATGGCAGCCGCCACGCTCAAGGCTTTCTTCAAGTG...TTCATCAGCAAGCGGTTCCGCACCATGGCAGCCGCCACGCTCAAGGCTTTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR CAA 90 bp CTTAAGGAGAGCTGCTCAGCCATAGGATGGGACACCTTCCCATCTGGAAATGGACAAGACAGCGAGCTGTaGGCTGCGAGGTGGGCGTGC +
Preference number: 5 (lower is better)
Translates to: LKESCSAIGWDTFPSGNGQDSEL*AARWAC
Trigger: GCACGCCCACCTCGCAGCCAACAGCTCGCTGTCTTG...TCCATTTCCAGATGGGAAGGTGTCCCATCCTATGGCTGAGCAGCTCTCCTTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CAA 90 bp TTCTGGCACTTGAAGAAAGCCTTGAGCGTGGCGGCTGCCATGGTGCGGAACCGCAGAAGGGCTAGCATGTaGGCAATGTCGGACATGATG +
Preference number: 5 (lower is better)
Translates to: FWHLKKALSVAAAMVRNRRRASM*AMSDMM
Trigger: CATCATGTCCGACATTGCCAACATGCTAGCCCTTCT...GCGGTTCCGCACCATGGCAGCCGCCACGCTCAAGGCTTTCTTCAAGTGCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR CAA 90 bp CTCGAGAATTCCTCCTTTCCCCCTGCGCACCAGGCAGGGTCTTTGTTTTGGAGGCAGCATGGGCACCTTTaGTGTCTGCGTTTGTGGCGA +
Preference number: 5 (lower is better)
Translates to: LENSSFPPAHQAGSLFWRQHGHL*CLRLWR
Trigger: TCGCCACAAACGCAGACACAAAAGGTGCCCATGCTG...CCTCCAAAACAAAGACCCTGCCTGGTGCGCAGGGGGAAAGGAGGAATTCTCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CAA 90 bp GGGGATGCTGGTCAGGAAGCAGGTGATGTAAACACTTACAATGACTTTCCGGGTGAGACCGTGTGGTACTaGAGCGGGTGGCAGACAGCG +
Preference number: 5 (lower is better)
Translates to: GDAGQEAGDVNTYNDFPGETVWY*SGWQTA
Trigger: CGCTGTCTGCCACCCGCTCAAGTACCACACGGTCTC...ACCCGGAAAGTCATTGTAAGTGTTTACATCACCTGCTTCCTGACCAGCATCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR CAA 90 bp CAAGAACTGGCACCCCCTTTTGAGCCATGTGCGTCAAAGGGCAGACGAGGCGTCTGGTACACCAGCATCTaGATGCAGTGTGAGTTTGCC +
Preference number: 5 (lower is better)
Translates to: QELAPPFEPCASKGRRGVWYTSI*MQCEFA
Trigger: GGCAAACTCACACTGCATCAAGATGCTGGTGTACCA...GACGCCTCGTCTGCCCTTTGACGCACATGGCTCAAAAGGGGGTGCCAGTTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CAA 90 bp CCCCTTTTGAGCCATGTGCGTCAAAGGGCAGACGAGGCGTCAGCATGGGCACCTTGGTGCGTATCATCATaGCAATGTCCAACCAAGGAC +
Preference number: 5 (lower is better)
Translates to: PLLSHVRQRADEASAWAPWCVSS*QCPTKD
Trigger: GTCCTTGGTTGGACATTGCAATGATGATACGCACCA...AGGTGCCCATGCTGACGCCTCGTCTGCCCTTTGACGCACATGGCTCAAAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CAA 90 bp CTCGAGAATTCCTCCTTTCCCCCTGCGCACCAGGCAGGGTCTTTGTTTTGGAGGAGAAGGGCTAGCATGTaGGCAATGTCGGACATGATG +
Preference number: 5 (lower is better)
Translates to: LENSSFPPAHQAGSLFWRRRASM*AMSDMM
Trigger: CATCATGTCCGACATTGCCAACATGCTAGCCCTTCT...CCTCCAAAACAAAGACCCTGCCTGGTGCGCAGGGGGAAAGGAGGAATTCTCGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CAA 90 bp CTCGAGAATTCCTCCTTTCCCCCTGCGCACCAGGCAGGGTCTTTGTTTTGGAGGGGCAGGGTTGGCAACTaGACACGTAAAAAGGCTTCT +
Preference number: 5 (lower is better)
Translates to: LENSSFPPAHQAGSLFWRGRVGN*TRKKAS
Trigger: AGAAGCCTTTTTACGTGTCAAGTTGCCAACCCTGCC...CCTCCAAAACAAAGACCCTGCCTGGTGCGCAGGGGGAAAGGAGGAATTCTCGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS TCA 90 bp CTTTCTTCTGTGTATCTCAGTCCCTCCTCTGGTCACTGGTGGGGCTaGGCAAGCAGACCGCCCTCCTTACAACTTGATCGGCTTCATGAT +
Preference number: 5 (lower is better)
Translates to: LSSVYLSPSSGHWWG*ASRPPSLQLDRLHD
Trigger: ATCATGAAGCCGATCAAGTTGTAAGGAGGGCGGTCTGCTTGCTCAGCCCCACCAGTGACCAGAGGAGGGACTGAGATACACAGAAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR CAA 90 bp GAAGAAGATGGAGCAGGGCACCAGGTAGACGGTGAAGCAGTGGATCCAGATGAGTGGTACACCAGCATCTaGATGCAGTGTGAGTTTGCC +
Preference number: 5 (lower is better)
Translates to: EEDGAGHQVDGEAVDPDEWYTSI*MQCEFA
Trigger: GGCAAACTCACACTGCATCAAGATGCTGGTGTACCA...CTCATCTGGATCCACTGCTTCACCGTCTACCTGGTGCCCTGCTCCATCTTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR CAA 90 bp TCATCATTGCAATGTCCAACCAAGGACACAAATCATATAGCAAGAGAGAAGCTATGCCCGCCTGGAGTCTaGGCTCAGCCCTCCCGCAGG +
Preference number: 5 (lower is better)
Translates to: SSLQCPTKDTNHIAREKLCPPGV*AQPSRR
Trigger: CCTGCGGGAGGGCTGAGCCAAGACTCCAGGCGGGCA...TAGCTTCTCTCTTGCTATATGATTTGTGTCCTTGGTTGGACATTGCAATGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CAA 90 bp TGCTACTGGGGCTTGGTAAGTCCCATAAATGAAGGGTTCCCAGTGACTGTGGATCTTTTGTGTCTGCGTTaGTGGCGAAATGGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: CYWGLVSPINEGFPVTVDLLCLR*WRNGSA
Trigger: GGCGCTGCCATTTCGCCACAAACGCAGACACAAAAG...ATCCACAGTCACTGGGAACCCTTCATTTATGGGACTTACCAAGCCCCAGTAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CAA 90 bp CAGCTGGGCTGTGAGACAGAGCTGAGAACACCTCCTCTCATACCCGCAGAGCTGACTGTCTGCCGTTTTTaGGTCACCAAAAATGTCATG +
Preference number: 5 (lower is better)
Translates to: QLGCETELRTPPLIPAELTVCRF*VTKNVM
Trigger: CATGACATTTTTGGTGACCAAAAAACGGCAGACAGT...CAGCTCTGCGGGTATGAGAGGAGGTGTTCTCAGCTCTGTCTCACAGCCCAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CAA 90 bp CCCCGTGGAGTAGCCACGGAGACGAAAATTGCTCTTCCTCCTGAGCTTGTACACCTCTTCCTCCTGAGCTaGTACACAATGATTGAGTTC +
Preference number: 5 (lower is better)
Translates to: PRGVATETKIALPPELVHLFLLS*YTMIEF
Trigger: GAACTCAATCATTGTGTACAAGCTCAGGAGGAAGAG...GTGTACAAGCTCAGGAGGAAGAGCAATTTTCGTCTCCGTGGCTACTCCACGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR CAA 90 bp ATAGGATGGGACACCTTCCCATCTGGAAATGGATTAGACAGAGGCAGTAGTTGCAACTGGCACCCCCTTTaGAGCCATGTGCGTCAAAGG +
Preference number: 5 (lower is better)
Translates to: IGWDTFPSGNGLDRGSSCNWHPL*SHVRQR
Trigger: CCTTTGACGCACATGGCTCAAAAGGGGGTGCCAGTT...GCAACTACTGCCTCTGTCTAATCCATTTCCAGATGGGAAGGTGTCCCATCCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CAA 90 bp CTTAAGGAGAGCTGCTCAGCCATAGGATGGGACACCTTCCCATCTGGAAATGGAATCCTAGAAATGTTCTaGCCTTGGACAGGCAAGGGT +
Preference number: 5 (lower is better)
Translates to: LKESCSAIGWDTFPSGNGILEMF*PWTGKG
Trigger: ACCCTTGCCTGTCCAAGGCAAGAACATTTCTAGGAT...TCCATTTCCAGATGGGAAGGTGTCCCATCCTATGGCTGAGCAGCTCTCCTTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CAA 90 bp CTCGAGAATTCCTCCTTTCCCCCTGCGCACCAGGCAGGGTCTTTGTTTTGGAGGCAACATGGCTCTTTTTaGAGGATCTTTTGCAAAGGT +
Preference number: 5 (lower is better)
Translates to: LENSSFPPAHQAGSLFWRQHGSF*RIFCKG
Trigger: ACCTTTGCAAAAGATCCTCAAAAAAGAGCCATGTTG...CCTCCAAAACAAAGACCCTGCCTGGTGCGCAGGGGGAAAGGAGGAATTCTCGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS TCA 90 bp AGTTGTAGGAGGACTTCTGTCTTCTTGCCACCAGCTGGGAGAGGATaGTCACTGTCAAGATATTTGCTGGTAAACCGAGGCACAGCAAGA +
Preference number: 5 (lower is better)
Translates to: SCRRTSVFLPPAGRG*SLSRYLLVNRGTAR
Trigger: TCTTGCTGTGCCTCGGTTTACCAGCAAATATCTTGACAGTGATCATCCTCTCCCAGCTGGTGGCAAGAAGACAGAAGTCCTCCTACAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CAA 90 bp CTTAAGGAGAGCTGCTCAGCCATAGGATGGGACACCTTCCCATCTGGAAATGGACTCTTCCTCCTGAGCTaGTACACAATGATTGAGTTC +
Preference number: 5 (lower is better)
Translates to: LKESCSAIGWDTFPSGNGLFLLS*YTMIEF
Trigger: GAACTCAATCATTGTGTACAAGCTCAGGAGGAAGAG...TCCATTTCCAGATGGGAAGGTGTCCCATCCTATGGCTGAGCAGCTCTCCTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CAA 90 bp CAGGGATGCCCCTATTCATTACATCCTAGAAATGTTCTTGCCTTGGACAGGCAAGGTTGCTTCTGGCACTaGAAGAAAGCCTTGAGCGTG +
Preference number: 5 (lower is better)
Translates to: QGCPYSLHPRNVLALDRQGCFWH*KKALSV
Trigger: CACGCTCAAGGCTTTCTTCAAGTGCCAGAAGCAACC...TTGCCTGTCCAAGGCAAGAACATTTCTAGGATGTAATGAATAGGGGCATCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CAA 90 bp ACCCCAGGTTTGAGGTCACAGCTATGCGGGTTTGGAGATTTCCTGAAGAAGCTCGACTACTTCTCTACTTaGTGTCCTAACTGGTCACAG +
Preference number: 5 (lower is better)
Translates to: TPGLRSQLCGFGDFLKKLDYFST*CPNWSQ
Trigger: CTGTGACCAGTTAGGACACAAAGTAGAGAAGTAGTC...GAGCTTCTTCAGGAAATCTCCAAACCCGCATAGCTGTGACCTCAAACCTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CAA 90 bp GACCTGAGGCATCTGCATGTTCAAGATGAAATCTTCCAACAGGAAGTCCACAAACCACGGAGACGAAAATaGCTCTTCCTCCTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: DLRHLHVQDEIFQQEVHKPRRRK*LFLLSL
Trigger: CAAGCTCAGGAGGAAGAGCAATTTTCGTCTCCGTGG...TTTGTGGACTTCCTGTTGGAAGATTTCATCTTGAACATGCAGATGCCTCAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR CAA 90 bp ATCTTTTCCAATAGCAGGGTGTTTGCAACACACAAGTTCGTGCCCACTCCGGTCGTAGAACTGTACAGGTaGCTTCTGGCACTTGAAGAA +
Preference number: 5 (lower is better)
Translates to: IFSNSRVFATHKFVPTPVVELYR*LLALEE
Trigger: TTCTTCAAGTGCCAGAAGCAACCTGTACAGTTCTAC...GACCGGAGTGGGCACGAACTTGTGTGTTGCAAACACCCTGCTATTGGAAAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CAA 90 bp AAAGTGTCTGAGGAAAATGTTCCCAATGCACACCCAGTTTTTAAACATCAACAAGACTGGCTCCTACCCTaGGCCGTGATCCCCTCTGCT +
Preference number: 5 (lower is better)
Translates to: KVSEENVPNAHPVFKHQQDWLLP*AVIPSA
Trigger: AGCAGAGGGGATCACGGCCAAGGGTAGGAGCCAGTC...TTGTTGATGTTTAAAAACTGGGTGTGCATTGGGAACATTTTCCTCAGACACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CAA 90 bp ATCTTTTCCAATAGCAGGGTGTTTGCAACACACAAGTTCGTGCCCACTCCGGTCAGTTTAGGGTTTGTGTaGCCATGGGGCCTTTTCTTA +
Preference number: 5 (lower is better)
Translates to: IFSNSRVFATHKFVPTPVSLGFV*PWGLFL
Trigger: TAAGAAAAGGCCCCATGGCAACACAAACCCTAAACT...GACCGGAGTGGGCACGAACTTGTGTGTTGCAAACACCCTGCTATTGGAAAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CAA 90 bp TTTCCTGAAGAAGCTCTGGCCACAGTTTGGATGGGATCCAATACTCTTCTATTCGGTAGGCTCCCCATGTaGAACCAGGAGGTACCAAAT +
Preference number: 5 (lower is better)
Translates to: FPEEALATVWMGSNTLLFGRLPM*NQEVPN
Trigger: ATTTGGTACCTCCTGGTTCAACATGGGGAGCCTACC...GAATAGAAGAGTATTGGATCCCATCCAAACTGTGGCCAGAGCTTCTTCAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CAA 90 bp CTGTCAATGGTTAACGGTACAGTAATCCATATGGAGGTGTGGATGGATGAGAATGGTTGCTTCTGGCACTaGAAGAAAGCCTTGAGCGTG +
Preference number: 5 (lower is better)
Translates to: LSMVNGTVIHMEVWMDENGCFWH*KKALSV
Trigger: CACGCTCAAGGCTTTCTTCAAGTGCCAGAAGCAACC...ATTCTCATCCATCCACACCTCCATATGGATTACTGTACCGTTAACCATTGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR CAA 90 bp ATAGGATGGGACACCTTCCCATCTGGAAATGGATTAGACAGAGGCAGTAGTTGCGTAGAACTGTACAGGTaGCTTCTGGCACTTGAAGAA +
Preference number: 5 (lower is better)
Translates to: IGWDTFPSGNGLDRGSSCVELYR*LLALEE
Trigger: TTCTTCAAGTGCCAGAAGCAACCTGTACAGTTCTAC...GCAACTACTGCCTCTGTCTAATCCATTTCCAGATGGGAAGGTGTCCCATCCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326571.7
ENST00000570682.2
CDS-3UTR CAA 90 bp ACCCCAGGTTTGAGGTCACAGCTATGCGGGTTTGGAGATTTCCTGAAGAAGCTCAGATCCAGGGGCTACTaGTTATGGAAAAGTTATGAT +
Preference number: 5 (lower is better)
Translates to: TPGLRSQLCGFGDFLKKLRSRGY*LWKSYD
Trigger: ATCATAACTTTTCCATAACAAGTAGCCCCTGGATCT...GAGCTTCTTCAGGAAATCTCCAAACCCGCATAGCTGTGACCTCAAACCTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CAA 90 bp AAAAAGACACAGCATGGTGGTGCGTATCATCATTGCAATGTCCAACCAAGGACACCAATAGCAGGGTGTTaGCAACACACAAGTTCGTGC +
Preference number: 5 (lower is better)
Translates to: KKTQHGGAYHHCNVQPRTPIAGC*QHTSSC
Trigger: GCACGAACTTGTGTGTTGCAAACACCCTGCTATTGG...TGTCCTTGGTTGGACATTGCAATGATGATACGCACCACCATGCTGTGTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CAA 90 bp AGTTTGGCAAATTTATTCCAAAACAGGGATGAATTCGAATACTGGGAATCTGAGCACTTGAAGAAAGCCTaGAGCGTGGCGGCTGCCATG +
Preference number: 5 (lower is better)
Translates to: SLANLFQNRDEFEYWESEHLKKA*SVAAAM
Trigger: CATGGCAGCCGCCACGCTCAAGGCTTTCTTCAAGTG...CTCAGATTCCCAGTATTCGAATTCATCCCTGTTTTGGAATAAATTTGCCAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CAA 90 bp TCTGTCATTCCCCTCATTTCCTTCCCCATGAGACATTTCAGCCGTCAAGTTGTTTCACTGTCAAGATATTaGCTGGTAAACCGAGGCACA +
Preference number: 5 (lower is better)
Translates to: SVIPLISFPMRHFSRQVVSLSRY*LVNRGT
Trigger: TGTGCCTCGGTTTACCAGCAAATATCTTGACAGTGA...AACAACTTGACGGCTGAAATGTCTCATGGGGAAGGAAATGAGGGGAATGACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CAA 90 bp TCTGTCATTCCCCTCATTTCCTTCCCCATGAGACATTTCAGCCGTCAAGTTGTTATGTGCTACTGGGGCTaGGTAAGTCCCATAAATGAA +
Preference number: 5 (lower is better)
Translates to: SVIPLISFPMRHFSRQVVMCYWG*VSPINE
Trigger: TTCATTTATGGGACTTACCAAGCCCCAGTAGCACAT...AACAACTTGACGGCTGAAATGTCTCATGGGGAAGGAAATGAGGGGAATGACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CAA 90 bp CTGTCAATGGTTAACGGTACAGTAATCCATATGGAGGTGTGGATGGATGAGAATCGCCCTCCTTACAACTaGATCGGCTTCATGATATCT +
Preference number: 5 (lower is better)
Translates to: LSMVNGTVIHMEVWMDENRPPYN*IGFMIS
Trigger: AGATATCATGAAGCCGATCAAGTTGTAAGGAGGGCG...ATTCTCATCCATCCACACCTCCATATGGATTACTGTACCGTTAACCATTGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR CAA 90 bp ATAGTTGTAGGAGGACTTCTGTCTTCTTGCCACCAGCTGGGAGAGGATGATCACTCACTGTCAAGATATTaGCTGAATGCTTTCTTCTGT +
Preference number: 5 (lower is better)
Translates to: IVVGGLLSSCHQLGEDDHSLSRY*LNAFFC
Trigger: ACAGAAGAAAGCATTCAGCAAATATCTTGACAGTGA...GTGATCATCCTCTCCCAGCTGGTGGCAAGAAGACAGAAGTCCTCCTACAACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR CAA 90 bp TCATCATTGCAATGTCCAACCAAGGACACAAATCATATAGCAAGAGAGAAGCTACCACGGAGACGAAAATaGCTCTTCCTCCTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: SSLQCPTKDTNHIAREKLPRRRK*LFLLSL
Trigger: CAAGCTCAGGAGGAAGAGCAATTTTCGTCTCCGTGG...TAGCTTCTCTCTTGCTATATGATTTGTGTCCTTGGTTGGACATTGCAATGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CAA 90 bp ATCTTTTCCAATAGCAGGGTGTTTGCAACACACAAGTTCGTGCCCACTCCGGTCTGTAGATATTGCACTTaGACTCATTCATGTGTAGCT +
Preference number: 5 (lower is better)
Translates to: IFSNSRVFATHKFVPTPVCRYCT*THSCVA
Trigger: AGCTACACATGAATGAGTCAAAGTGCAATATCTACA...GACCGGAGTGGGCACGAACTTGTGTGTTGCAAACACCCTGCTATTGGAAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CAA 90 bp CCAGTAATAGGGGATGCTGGTCAGGAAGCAGGTGATGTAAACACTTACAATGACAGATCCAGGGGCTACTaGTTATGGAAAAGTTATGAT +
Preference number: 5 (lower is better)
Translates to: PVIGDAGQEAGDVNTYNDRSRGY*LWKSYD
Trigger: ATCATAACTTTTCCATAACAAGTAGCCCCTGGATCT...GTCATTGTAAGTGTTTACATCACCTGCTTCCTGACCAGCATCCCCTATTACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS-3UTR CAA 90 bp TCTGTCATTCCCCTCATTTCCTTCCCCATGAGACATTTCAGCCGTCAAGTTGTTGCATACTGCAATTGCTaGAACATAGATGCAAATACC +
Preference number: 5 (lower is better)
Translates to: SVIPLISFPMRHFSRQVVAYCNC*NIDANT
Trigger: GGTATTTGCATCTATGTTCAAGCAATTGCAGTATGC...AACAACTTGACGGCTGAAATGTCTCATGGGGAAGGAAATGAGGGGAATGACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CAA 90 bp AAAGTGTCTGAGGAAAATGTTCCCAATGCACACCCAGTTTTTAAACATCAACAAAGCTCTGGCCACAGTTaGGATGGGATCCAATACTCT +
Preference number: 5 (lower is better)
Translates to: KVSEENVPNAHPVFKHQQSSGHS*DGIQYS
Trigger: AGAGTATTGGATCCCATCCAAACTGTGGCCAGAGCT...TTGTTGATGTTTAAAAACTGGGTGTGCATTGGGAACATTTTCCTCAGACACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS-3UTR CAA 90 bp AGAAGTAATAAATTAAAGTGTCTGAGGAAAATGTTCCCAATGCACACCCAGTTTATCAGCATACTGCAATaGCTTGAACATAGATGCAAA +
Preference number: 5 (lower is better)
Translates to: RSNKLKCLRKMFPMHTQFISILQ*LEHRCK
Trigger: TTTGCATCTATGTTCAAGCAATTGCAGTATGCTGAT...AAACTGGGTGTGCATTGGGAACATTTTCCTCAGACACTTTAATTTATTACTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS GCA 72 bp GCGCCCCTCGCTCCCCTTGCCGCTTCGCGCCCGGCCTaGCAGCCCGACTCTGGTCGCCGGCTCGGTGGTGGC +
Preference number: 6 (lower is better)
Translates to: APLAPLAASRPA*QPDSGRRLGGG
Trigger: GCCACCACCGAGCCGGCGACCAGAGTCGGGCTGGCAGGCCGGGCGCGAAGCGGCAAGGGGAGCGAGGGGCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326571.7
ENST00000570682.2
CDS GCA 72 bp GTGCGTGTGCTCCATGAGCGCGCCCCTCGCTCCCCTTaGCGCTTCGCGCCCGGCCTGCCAGCCCGACTCTGG +
Preference number: 6 (lower is better)
Translates to: VRVLHERAPRSP*RFAPGLPARLW
Trigger: CCAGAGTCGGGCTGGCAGGCCGGGCGCGAAGCGGCAAGGGGAGCGAGGGGCGCGCTCATGGAGCACACGCAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326571.7
ENST00000570682.2
CDS CAA 90 bp CCCAAGCCGCAGGCCGAGCCGGGGGACCACCAAGACAGCGAGCTGTaGGCTGCGAGGTGGGCGTGCGTGTGCTCCATGAGCGCGCCCCTC +
Preference number: 6 (lower is better)
Translates to: PKPQAEPGDHQDSEL*AARWACVCSMSAPL
Trigger: GAGGGGCGCGCTCATGGAGCACACGCACGCCCACCTCGCAGCCAACAGCTCGCTGTCTTGGTGGTCCCCCGGCTCGGCCTGCGGCTTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326571.7
ENST00000570682.2
CDS TCA 72 bp AGCTGTTGGCTGCGAGGTGGGCGTGCGTGTGCTCCATaGGCGCGCCCCTCGCTCCCCTTGCCGCTTCGCGCC +
Preference number: 6 (lower is better)
Translates to: SCWLRGGRACAP*ARPSLPLPLRA
Trigger: GGCGCGAAGCGGCAAGGGGAGCGAGGGGCGCGCTCATGGAGCACACGCACGCCCACCTCGCAGCCAACAGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326571.7
ENST00000570682.2
CDS GCA 72 bp GACAGCGAGCTGTTGGCTGCGAGGTGGGCGTGCGTGTaGTCCATGAGCGCGCCCCTCGCTCCCCTTGCCGCT +
Preference number: 6 (lower is better)
Translates to: DSELLAARWACV*SMSAPLAPLAA
Trigger: AGCGGCAAGGGGAGCGAGGGGCGCGCTCATGGAGCACACGCACGCCCACCTCGCAGCCAACAGCTCGCTGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326571.7
ENST00000570682.2
CDS GCA 72 bp ACCCTTGGCCGTGATCCCCTCTGCTCGCTCCGCACCTaGCCGCCTGGAGTCTTGGCTCAGCCCTCCCGCAGG +
Preference number: 6 (lower is better)
Translates to: TLGRDPLCSLRT*PPGVLAQPSRR
Trigger: CCTGCGGGAGGGCTGAGCCAAGACTCCAGGCGGGCAGGTGCGGAGCGAGCAGAGGGGATCACGGCCAAGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS CAA 72 bp GCAGCGCCTCTCTCCCCGCAGGACTGGCTCCTACCCTaGGCCGTGATCCCCTCTGCTCGCTCCGCACCTGCC +
Preference number: 6 (lower is better)
Translates to: AAPLSPQDWLLP*AVIPSARSAPA
Trigger: GGCAGGTGCGGAGCGAGCAGAGGGGATCACGGCCAAGGGTAGGAGCCAGTCCTGCGGGGAGAGAGGCGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS CCA 72 bp GCAGCTGGAGCAGCAGCGCCTCTCTCCCCGCAGGACTaGCTCCTACCCTTGGCCGTGATCCCCTCTGCTCGC +
Preference number: 6 (lower is better)
Translates to: AAGAAAPLSPQD*LLPLAVIPSAR
Trigger: GCGAGCAGAGGGGATCACGGCCAAGGGTAGGAGCCAGTCCTGCGGGGAGAGAGGCGCTGCTGCTCCAGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS CAA 72 bp CAGGCCGAGCCGGGGGACCACCAAGACAGCGAGCTGTaGGCTGCGAGGTGGGCGTGCGTGTGCTCCATGAGC +
Preference number: 6 (lower is better)
Translates to: QAEPGDHQDSEL*AARWACVCSMS
Trigger: GCTCATGGAGCACACGCACGCCCACCTCGCAGCCAACAGCTCGCTGTCTTGGTGGTCCCCCGGCTCGGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326571.7
ENST00000570682.2
CDS GCA 72 bp CACCAAGACAGCGAGCTGTTGGCTGCGAGGTGGGCGTaGGTGTGCTCCATGAGCGCGCCCCTCGCTCCCCTT +
Preference number: 6 (lower is better)
Translates to: HQDSELLAARWA*VCSMSAPLAPL
Trigger: AAGGGGAGCGAGGGGCGCGCTCATGGAGCACACGCACGCCCACCTCGCAGCCAACAGCTCGCTGTCTTGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326571.7
ENST00000570682.2
CDS GCA 72 bp GCAGGACTGGCTCCTACCCTTGGCCGTGATCCCCTCTaGTCGCTCCGCACCTGCCCGCCTGGAGTCTTGGCT +
Preference number: 6 (lower is better)
Translates to: AGLAPTLGRDPL*SLRTCPPGVLA
Trigger: AGCCAAGACTCCAGGCGGGCAGGTGCGGAGCGAGCAGAGGGGATCACGGCCAAGGGTAGGAGCCAGTCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570682.2
CDS CAA 72 bp GGTGGGGCTGAGCAAGCAGACCGCCCTCCTTACAACTaGATCGGCTTCATGATATCTGGTAAACCGAGGCAC +
Preference number: 6 (lower is better)
Translates to: GGAEQADRPPYN*IGFMISGKPRH
Trigger: GTGCCTCGGTTTACCAGATATCATGAAGCCGATCAAGTTGTAAGGAGGGCGGTCTGCTTGCTCAGCCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326571.7
CDS TCA 72 bp AGGACTTCTGTCTTCTTGCCACCAGCTGGGAGAGGATaGTCACTGTCAAGATATTTGCTGGTAAACCGAGGC +
Preference number: 6 (lower is better)
Translates to: RTSVFLPPAGRG*SLSRYLLVNRG
Trigger: GCCTCGGTTTACCAGCAAATATCTTGACAGTGATCATCCTCTCCCAGCTGGTGGCAAGAAGACAGAAGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570682.2