RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPR137B (Homo sapiens)

Ensembl gene IDs: ENSG00000077585

Ensembl transcript IDs: ENST00000366592.8, ENST00000419162.5, ENST00000454895.2

Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTACCAGTCATAATCAAAGGAATGGACGCTCTTGTTCTGAGAAAATaGCAGGATGAACAGGTTGTAGCAGGCCCGAGAGGTGTAAAGCAG +
Preference number: 1 (lower is better)
Translates to: VPVIIKGMDALVLRK*QDEQVVAGPRGVKQ
Trigger: CTGCTTTACACCTCTCGGGCCTGCTACAACCTGTTCATCCTGTCATTTTCTCAGAACAAGAGCGTCCATTCCTTTGATTATGACTGGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419162.5
3UTR-3UTR CCA 90 bp GATCTGGGACTGAATCCATGGCTGGGGACCATTCCAGGGTTGGTAAGGTCCTTTACACGGAGGAGCCCTTaGACTCCAAGTAAATGTTGG +
Preference number: 2 (lower is better)
Translates to: DLGLNPWLGTIPGLVRSFTRRSP*TPSKCW
Trigger: CCAACATTTACTTGGAGTCCAAGGGCTCCTCCGTGT...AAAGGACCTTACCAACCCTGGAATGGTCCCCAGCCATGGATTCAGTCCCAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419162.5
3UTR-3UTR TCA 90 bp AAGAGTTCCCAAACAAATAACACCACTCCAAATAATACGTATCCAGCATCTCCCCCGATGGCAGTCACTTaGCACACGGAGGAGCCCTTG +
Preference number: 2 (lower is better)
Translates to: KSSQTNNTTPNNTYPASPPMAVT*HTEEPL
Trigger: CAAGGGCTCCTCCGTGTGTCAAGTGACTGCCATCGG...GGGAGATGCTGGATACGTATTATTTGGAGTGGTGTTATTTGTTTGGGAACTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419162.5
3UTR-3UTR TCA 90 bp GATCTGGGACTGAATCCATGGCTGGGGACCATTCCAGGGTTGGTAAGGTCCTTTCTTGTTCTGAGAAAATaGCAGGATGAACAGGTTGTA +
Preference number: 2 (lower is better)
Translates to: DLGLNPWLGTIPGLVRSFLVLRK*QDEQVV
Trigger: TACAACCTGTTCATCCTGTCATTTTCTCAGAACAAG...AAAGGACCTTACCAACCCTGGAATGGTCCCCAGCCATGGATTCAGTCCCAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419162.5
3UTR-3UTR TCA 90 bp TCATCTGAGGAATCGTCCATAAAACTGTTAACTGATGCTACCCAAGGCTTGGTTGTCAGGATCCAAAGTTaGGTCTTGCAAAGTTCCTGC +
Preference number: 2 (lower is better)
Translates to: SSEESSIKLLTDATQGLVVRIQS*VLQSSC
Trigger: GCAGGAACTTTGCAAGACTCAACTTTGGATCCTGAC...AACCAAGCCTTGGGTAGCATCAGTTAACAGTTTTATGGACGATTCCTCAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454895.2
3UTR CAA 90 bp TCTGAGGAATCGTCCATAAAACTGTTAACTGATGCTACCCAAGGCTaGGTTTGTCAGGATCCAAAGTTGAGTCTTGCAAAGTTCCTGCTT +
Preference number: 2 (lower is better)
Translates to: SEESSIKLLTDATQG*VCQDPKLSLAKFLL
Trigger: AAGCAGGAACTTTGCAAGACTCAACTTTGGATCCTGACAAACCAAGCCTTGGGTAGCATCAGTTAACAGTTTTATGGACGATTCCTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454895.2
3UTR-3UTR TCA 90 bp GTAGGTAAGAGTTCCCAAACAAATAACACCACTCCAAATAATACGTATCCAGCAAAAGCAGTATCACGGTaGCACCGATGGCAGTCACTT +
Preference number: 2 (lower is better)
Translates to: VGKSSQTNNTTPNNTYPAKAVSR*HRWQSL
Trigger: AAGTGACTGCCATCGGTGTCACCGTGATACTGCTTT...TGCTGGATACGTATTATTTGGAGTGGTGTTATTTGTTTGGGAACTCTTACCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419162.5
3UTR-3UTR TCA 90 bp AAGGTGGTAGGTAAGAGTTCCCAAACAAATAACACCACTCCAAATAATACGTATCCAGCATCTCCCAGCTaGTTCTTCAAATCTGCCTGG +
Preference number: 2 (lower is better)
Translates to: KVVGKSSQTNNTTPNNTYPASPS*FFKSAW
Trigger: CCAGGCAGATTTGAAGAATCAGCTGGGAGATGCTGG...ATACGTATTATTTGGAGTGGTGTTATTTGTTTGGGAACTCTTACCTACCACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419162.5
3UTR-3UTR GCA 90 bp TCATCTGAGGAATCGTCCATAAAACTGTTAACTGATGCTACCCAAGGCTTGGTTCAAAGTTCCTGCTTGTaGCAGGAAGCTGTTAGTTTG +
Preference number: 2 (lower is better)
Translates to: SSEESSIKLLTDATQGLVQSSCL*QEAVSL
Trigger: CAAACTAACAGCTTCCTGGCACAAGCAGGAACTTTG...AACCAAGCCTTGGGTAGCATCAGTTAACAGTTTTATGGACGATTCCTCAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454895.2
3UTR-3UTR GCA 90 bp ATAAAACTGTTAACTGATGCTACCCAAGGCTTGGTTTGTCAGGATCCAAAGTTGGTCTTGCAAAGTTCCTaGTTGTGCCAGGAAGCTGTT +
Preference number: 2 (lower is better)
Translates to: IKLLTDATQGLVCQDPKLVLQSS*LCQEAV
Trigger: AACAGCTTCCTGGCACAAGCAGGAACTTTGCAAGAC...CAACTTTGGATCCTGACAAACCAAGCCTTGGGTAGCATCAGTTAACAGTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454895.2
3UTR-3UTR TCA 90 bp AAGGTGGTAGGTAAGAGTTCCCAAACAAATAACACCACTCCAAATAATACGTATGAGAAAATGACAGGATaGACAGGTTGTAGCAGGCCC +
Preference number: 2 (lower is better)
Translates to: KVVGKSSQTNNTTPNNTYEKMTG*TGCSRP
Trigger: GGGCCTGCTACAACCTGTTCATCCTGTCATTTTCTC...ATACGTATTATTTGGAGTGGTGTTATTTGTTTGGGAACTCTTACCTACCACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419162.5
3UTR-3UTR TCA 90 bp GTGGTAGGTAAGAGTTCCCAAACAAATAACACCACTCCAAATAATACGTATCCATGGACGCTCTTGTTCTaGGAAAATGACAGGATGAAC +
Preference number: 2 (lower is better)
Translates to: VVGKSSQTNNTTPNNTYPWTLLF*ENDRMN
Trigger: GTTCATCCTGTCATTTTCTCAGAACAAGAGCGTCCA...TGGATACGTATTATTTGGAGTGGTGTTATTTGTTTGGGAACTCTTACCTACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419162.5
3UTR-3UTR TCA 90 bp CACTGGAGTTGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTCTACCAATGCTGAAGCTTTTCATCTaGGGAATCGTCCATAAAACT +
Preference number: 2 (lower is better)
Translates to: HWSCNWLSCQLYFRSLPMLKLFI*GIVHKT
Trigger: AGTTTTATGGACGATTCCTCAGATGAAAAGCTTCAG...CATTGGTAGACTCCTAAAATACAGTTGACAACTTAGCCAATTGCAACTCCAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366592.8
3UTR-3UTR TCA 90 bp ATAAAACTGTTAACTGATGCTACCCAAGGCTTGGTTTGTCAGGATCCAAAGTTGCTGAAGCTTTTCATCTaGGGAATCGTCCATAAAACT +
Preference number: 2 (lower is better)
Translates to: IKLLTDATQGLVCQDPKLLKLFI*GIVHKT
Trigger: AGTTTTATGGACGATTCCTCAGATGAAAAGCTTCAG...CAACTTTGGATCCTGACAAACCAAGCCTTGGGTAGCATCAGTTAACAGTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454895.2
3UTR-3UTR TCA 90 bp CACTGGAGTTGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTCTACCAATGTTAAATTATACCCACTaGAATAGCAAGGCTCCCTCT +
Preference number: 2 (lower is better)
Translates to: HWSCNWLSCQLYFRSLPMLNYTH*NSKAPS
Trigger: AGAGGGAGCCTTGCTATTTCAGTGGGTATAATTTAA...CATTGGTAGACTCCTAAAATACAGTTGACAACTTAGCCAATTGCAACTCCAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366592.8
3UTR-3UTR TCA 90 bp AAGGTGGTAGGTAAGAGTTCCCAAACAAATAACACCACTCCAAATAATACGTATCAAATCTGCCTGGTCTaGTACATTGTACCAGTCATA +
Preference number: 2 (lower is better)
Translates to: KVVGKSSQTNNTTPNNTYQICLV*YIVPVI
Trigger: TATGACTGGTACAATGTATCAGACCAGGCAGATTTG...ATACGTATTATTTGGAGTGGTGTTATTTGTTTGGGAACTCTTACCTACCACCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419162.5
3UTR-3UTR CCA 90 bp TGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTCTACCAATGTGGCACTCATTCCTATGGGGCCATTaGAAACCTGTAACAAATAAA +
Preference number: 2 (lower is better)
Translates to: CNWLSCQLYFRSLPMWHSFLWGH*KPVTNK
Trigger: TTTATTTGTTACAGGTTTCCAATGGCCCCATAGGAA...TGAGTGCCACATTGGTAGACTCCTAAAATACAGTTGACAACTTAGCCAATTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366592.8
3UTR-3UTR CCA 90 bp GTGGTAGGTAAGAGTTCCCAAACAAATAACACCACTCCAAATAATACGTATCCATTCTTCAAATCTGCCTaGTCTGATACATTGTACCAG +
Preference number: 2 (lower is better)
Translates to: VVGKSSQTNNTTPNNTYPFFKSA*SDTLYQ
Trigger: CTGGTACAATGTATCAGACCAGGCAGATTTGAAGAA...TGGATACGTATTATTTGGAGTGGTGTTATTTGTTTGGGAACTCTTACCTACCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419162.5
3UTR-3UTR CCA 90 bp AGTCTACATTATTGCTTATTCCTATGGGGCCATTGGAAACCTGTAACAAATAAAATGCTACCCAAGGCTTaGTTTGTCAGGATCCAAAGT +
Preference number: 2 (lower is better)
Translates to: SLHYCLFLWGHWKPVTNKMLPKA*FVRIQS
Trigger: ACTTTGGATCCTGACAAACCAAGCCTTGGGTAGCAT...TTTATTTGTTACAGGTTTCCAATGGCCCCATAGGAATAAGCAATAATGTAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454895.2
3UTR-3UTR TCA 90 bp AATTATCAACACTGGAGTTGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTGTCACTATGCTTTTCTaGAGCTTTTCATCTGAGGAA +
Preference number: 2 (lower is better)
Translates to: NYQHWSCNWLSCQLYFRSVTMLF*SFSSEE
Trigger: TTCCTCAGATGAAAAGCTTCAGAAAAGCATAGTGAC...ACTCCTAAAATACAGTTGACAACTTAGCCAATTGCAACTCCAGTGTTGATAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366592.8
3UTR TCA 72 bp TGTAGCAGGCCCGAGAGGTGTAAAGCAGTATCACGGTaGCACCGATGGCAGTCACTTGACACACGGAGGAGC +
Preference number: 3 (lower is better)
Translates to: CSRPERCKAVSR*HRWQSLDTRRS
Trigger: GCTCCTCCGTGTGTCAAGTGACTGCCATCGGTGTCACCGTGATACTGCTTTACACCTCTCGGGCCTGCTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419162.5
3UTR TCA 72 bp ATGCTACCCAAGGCTTGGTTTGTCAGGATCCAAAGTTaGGTCTTGCAAAGTTCCTGCTTGTGCCAGGAAGCT +
Preference number: 3 (lower is better)
Translates to: MLPKAWFVRIQS*VLQSSCLCQEA
Trigger: AGCTTCCTGGCACAAGCAGGAACTTTGCAAGACTCAACTTTGGATCCTGACAAACCAAGCCTTGGGTAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454895.2
3UTR GCA 72 bp CCAAGGCTTGGTTTGTCAGGATCCAAAGTTGAGTCTTaGAAAGTTCCTGCTTGTGCCAGGAAGCTGTTAGTT +
Preference number: 3 (lower is better)
Translates to: PRLGLSGSKVES*KVPACARKLLV
Trigger: AACTAACAGCTTCCTGGCACAAGCAGGAACTTTGCAAGACTCAACTTTGGATCCTGACAAACCAAGCCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454895.2
3UTR TCA 72 bp ATAATCAAAGGAATGGACGCTCTTGTTCTGAGAAAATaGCAGGATGAACAGGTTGTAGCAGGCCCGAGAGGT +
Preference number: 3 (lower is better)
Translates to: IIKGMDALVLRK*QDEQVVAGPRG
Trigger: ACCTCTCGGGCCTGCTACAACCTGTTCATCCTGTCATTTTCTCAGAACAAGAGCGTCCATTCCTTTGATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419162.5
3UTR CCA 72 bp TACATTAGCGCCCTACTGAAAGGAAGTACCAGTCTTTaGGCAAAACTTAAGAGATTCCTTGAGGAACCTACG +
Preference number: 3 (lower is better)
Translates to: YISALLKGSTSL*AKLKRFLEEPT
Trigger: CGTAGGTTCCTCAAGGAATCTCTTAAGTTTTGCCCAAAGACTGGTACTTCCTTTCAGTAGGGCGCTAATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366592.8
3UTR TCA 72 bp ACCACTCCAAATAATACGTATCCAGCATCTCCCAGCTaGTTCTTCAAATCTGCCTGGTCTGATACATTGTAC +
Preference number: 3 (lower is better)
Translates to: TTPNNTYPASPS*FFKSAWSDTLY
Trigger: GTACAATGTATCAGACCAGGCAGATTTGAAGAATCAGCTGGGAGATGCTGGATACGTATTATTTGGAGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419162.5
3UTR TCA 72 bp TACCAATGTGGCACTCAGAATCGGAGTGACCATCAGTaGCCTAAAGAGGTAAGATTTGTGGAATACTTTAGT +
Preference number: 3 (lower is better)
Translates to: YQCGTQNRSDHQ*PKEVRFVEYFS
Trigger: ACTAAAGTATTCCACAAATCTTACCTCTTTAGGTCACTGATGGTCACTCCGATTCTGAGTGCCACATTGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366592.8
3UTR-3UTR CAA 90 bp TGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTCTACCAATGTGGCACTCATATCAGTCTACATTATaGCTTATTCCTATGGGGCCA +
Preference number: 3 (lower is better)
Translates to: CNWLSCQLYFRSLPMWHSYQSTL*LIPMGP
Trigger: TGGCCCCATAGGAATAAGCAATAATGTAGACTGATA...TGAGTGCCACATTGGTAGACTCCTAAAATACAGTTGACAACTTAGCCAATTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366592.8
3UTR-3UTR CAA 90 bp AGTCTACATTATTGCTTATTCCTATGGGGCCATTGGAAACCTGTAACAAATAAATGTCAGGATCCAAAGTaGAGTCTTGCAAAGTTCCTG +
Preference number: 3 (lower is better)
Translates to: SLHYCLFLWGHWKPVTNKCQDPK*SLAKFL
Trigger: CAGGAACTTTGCAAGACTCAACTTTGGATCCTGACA...TTTATTTGTTACAGGTTTCCAATGGCCCCATAGGAATAAGCAATAATGTAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454895.2
CDS-3UTR CCA 90 bp AAGCAGTATCACGGTGACACCGATGGCAGTCACTTGACACACGGAGGAGCCCTTCGAGTCGTTGCGGGCTaGGTCCCACGGCGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: KQYHGDTDGSHLTHGGALRVVAG*VPRRGL
Trigger: GAGACCCCGCCGTGGGACCCAGCCCGCAACGACTCG...AAGGGCTCCTCCGTGTGTCAAGTGACTGCCATCGGTGTCACCGTGATACTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419162.5
CDS-3UTR GCA 90 bp CAGTATCACGGTGACACCGATGGCAGTCACTTGACACACGGAGGAGCCCTTGGAGCATCGCGCTCAGCCTaGAGCCCCGAGACTGGAGGA +
Preference number: 4 (lower is better)
Translates to: QYHGDTDGSHLTHGGALGASRSA*SPETGG
Trigger: TCCTCCAGTCTCGGGGCTGCAGGCTGAGCGCGATGC...TCCAAGGGCTCCTCCGTGTGTCAAGTGACTGCCATCGGTGTCACCGTGATACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419162.5
CDS-3UTR CCA 90 bp GCTGGGGACCATTCCAGGGTTGGTAAGGTCCTTTGTAGGATTTCTAACTCGGAACGGCCGGGGTCAGCGTaGGCGGCAGCGAGTCGTTGC +
Preference number: 4 (lower is better)
Translates to: AGDHSRVGKVLCRISNSERPGSA*AAASRC
Trigger: GCAACGACTCGCTGCCGCCCACGCTGACCCCGGCCG...TTCCGAGTTAGAAATCCTACAAAGGACCTTACCAACCCTGGAATGGTCCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419162.5
CDS-3UTR TCA 90 bp CGATGGCAGTCACTTGACACACGGAGGAGCCCTTGGACTCCAAGTAAATGTTGGAGAAGACGAAGGGGCTaGGCGAATTGGCCGCCACGA +
Preference number: 4 (lower is better)
Translates to: RWQSLDTRRSPWTPSKCWRRRRG*ANWPPR
Trigger: TCGTGGCGGCCAATTCGCTCAGCCCCTTCGTCTTCT...CCAACATTTACTTGGAGTCCAAGGGCTCCTCCGTGTGTCAAGTGACTGCCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419162.5
CDS-3UTR CCA 90 bp CGATGGCAGTCACTTGACACACGGAGGAGCCCTTGGACTCCAAGTAAATGTTGGCTGGGACTGAATCCATaGCTGGGGACCATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RWQSLDTRRSPWTPSKCWLGLNP*LGTIPG
Trigger: CCCTGGAATGGTCCCCAGCCATGGATTCAGTCCCAG...CCAACATTTACTTGGAGTCCAAGGGCTCCTCCGTGTGTCAAGTGACTGCCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419162.5
CDS-3UTR TCA 90 bp GCTGGGGACCATTCCAGGGTTGGTAAGGTCCTTTGTAGGATTTCTAACTCGGAACGGTGTAGACGACGGTaGGGCCAAGCTTCACGTAGG +
Preference number: 4 (lower is better)
Translates to: AGDHSRVGKVLCRISNSERCRRR*GQASRR
Trigger: CCTACGTGAAGCTTGGCCTCACCGTCGTCTACACCG...TTCCGAGTTAGAAATCCTACAAAGGACCTTACCAACCCTGGAATGGTCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419162.5
CDS-3UTR GCA 90 bp CACTGGAGTTGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTCTACCAATGGCGGCAGCGAGTCGTTaGGGGCTGGGTCCCACGGCG +
Preference number: 4 (lower is better)
Translates to: HWSCNWLSCQLYFRSLPMAAASR*GLGPTA
Trigger: CGCCGTGGGACCCAGCCCGCAACGACTCGCTGCCGC...CATTGGTAGACTCCTAAAATACAGTTGACAACTTAGCCAATTGCAACTCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR GCA 90 bp AAGAGTTCCCAAACAAATAACACCACTCCAAATAATACGTATCCAGCATCTCCCGCGGCAGCGAGTCGTTaGGGGCTGGGTCCCACGGCG +
Preference number: 4 (lower is better)
Translates to: KSSQTNNTTPNNTYPASPAAASR*GLGPTA
Trigger: CGCCGTGGGACCCAGCCCGCAACGACTCGCTGCCGC...GGGAGATGCTGGATACGTATTATTTGGAGTGGTGTTATTTGTTTGGGAACTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419162.5
CDS-3UTR CCA 90 bp GATCTGGGACTGAATCCATGGCTGGGGACCATTCCAGGGTTGGTAAGGTCCTTTCTGCAGCCCCGAGACTaGAGGAAAGAAAACAAGCCG +
Preference number: 4 (lower is better)
Translates to: DLGLNPWLGTIPGLVRSFLQPRD*RKENKP
Trigger: CGGCTTGTTTTCTTTCCTCCAGTCTCGGGGCTGCAG...AAAGGACCTTACCAACCCTGGAATGGTCCCCAGCCATGGATTCAGTCCCAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419162.5
CDS-3UTR TCA 90 bp GATCTGGGACTGAATCCATGGCTGGGGACCATTCCAGGGTTGGTAAGGTCCTTTCCAGCATCTCCCAGCTaGTTCTTCAAATCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: DLGLNPWLGTIPGLVRSFPASPS*FFKSAW
Trigger: CCAGGCAGATTTGAAGAATCAGCTGGGAGATGCTGG...AAAGGACCTTACCAACCCTGGAATGGTCCCCAGCCATGGATTCAGTCCCAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419162.5
CDS-3UTR GCA 90 bp GATCTGGGACTGAATCCATGGCTGGGGACCATTCCAGGGTTGGTAAGGTCCTTTGGTAGAGGGGCAACCTaGGTGAAGTACAAGTTCATC +
Preference number: 4 (lower is better)
Translates to: DLGLNPWLGTIPGLVRSFGRGAT*VKYKFI
Trigger: GATGAACTTGTACTTCACGCAGGTTGCCCCTCTACC...AAAGGACCTTACCAACCCTGGAATGGTCCCCAGCCATGGATTCAGTCCCAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419162.5
CDS-3UTR GCA 90 bp TGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTCTACCAATGTGGCACTCAGCATCGCGCTCAGCCTaGAGCCCCGAGACTGGAGGA +
Preference number: 4 (lower is better)
Translates to: CNWLSCQLYFRSLPMWHSASRSA*SPETGG
Trigger: TCCTCCAGTCTCGGGGCTGCAGGCTGAGCGCGATGC...TGAGTGCCACATTGGTAGACTCCTAAAATACAGTTGACAACTTAGCCAATTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR CCA 90 bp AGTCTACATTATTGCTTATTCCTATGGGGCCATTGGAAACCTGTAACAAATAAACGGCCGGGGTCAGCGTaGGCGGCAGCGAGTCGTTGC +
Preference number: 4 (lower is better)
Translates to: SLHYCLFLWGHWKPVTNKRPGSA*AAASRC
Trigger: GCAACGACTCGCTGCCGCCCACGCTGACCCCGGCCG...TTTATTTGTTACAGGTTTCCAATGGCCCCATAGGAATAAGCAATAATGTAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366592.8
3UTR CAA 72 bp GTAAAGCAGTATCACGGTGACACCGATGGCAGTCACTaGACACACGGAGGAGCCCTTGGACTCCAAGTAAAT +
Preference number: 4 (lower is better)
Translates to: VKQYHGDTDGSH*THGGALGLQVN
Trigger: ATTTACTTGGAGTCCAAGGGCTCCTCCGTGTGTCAAGTGACTGCCATCGGTGTCACCGTGATACTGCTTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419162.5
CDS-3UTR TCA 90 bp AAACTGTTAACTGATGCTACCCAAGGCTTGGTTTGTCAGGATCCAAAGTTGAGTCCGATGGCAGTCACTTaGCACACGGAGGAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: KLLTDATQGLVCQDPKLSPMAVT*HTEEPL
Trigger: CAAGGGCTCCTCCGTGTGTCAAGTGACTGCCATCGG...ACTCAACTTTGGATCCTGACAAACCAAGCCTTGGGTAGCATCAGTTAACAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454895.2
CDS-3UTR TCA 90 bp GTTTGTCAGGATCCAAAGTTGAGTCTTGCAAAGTTCCTGCTTGTGCCAGGAAGCCCAGCATCTCCCAGCTaGTTCTTCAAATCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: VCQDPKLSLAKFLLVPGSPASPS*FFKSAW
Trigger: CCAGGCAGATTTGAAGAATCAGCTGGGAGATGCTGG...GCTTCCTGGCACAAGCAGGAACTTTGCAAGACTCAACTTTGGATCCTGACAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454895.2
CDS-3UTR CCA 90 bp AGTCTACATTATTGCTTATTCCTATGGGGCCATTGGAAACCTGTAACAAATAAACGAGTCGTTGCGGGCTaGGTCCCACGGCGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: SLHYCLFLWGHWKPVTNKRVVAG*VPRRGL
Trigger: GAGACCCCGCCGTGGGACCCAGCCCGCAACGACTCG...TTTATTTGTTACAGGTTTCCAATGGCCCCATAGGAATAAGCAATAATGTAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366592.8
3UTR CAA 72 bp GATGCTACCCAAGGCTTGGTTTGTCAGGATCCAAAGTaGAGTCTTGCAAAGTTCCTGCTTGTGCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: DATQGLVCQDPK*SLAKFLLVPGS
Trigger: GCTTCCTGGCACAAGCAGGAACTTTGCAAGACTCAACTTTGGATCCTGACAAACCAAGCCTTGGGTAGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454895.2
CDS-3UTR TCA 90 bp CACTGGAGTTGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTCTACCAATGCGGTGTAGACGACGGTaGGGCCAAGCTTCACGTAGG +
Preference number: 4 (lower is better)
Translates to: HWSCNWLSCQLYFRSLPMRCRRR*GQASRR
Trigger: CCTACGTGAAGCTTGGCCTCACCGTCGTCTACACCG...CATTGGTAGACTCCTAAAATACAGTTGACAACTTAGCCAATTGCAACTCCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR TCA 90 bp CACTGGAGTTGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTCTACCAATGAGAAGACGAAGGGGCTaGGCGAATTGGCCGCCACGA +
Preference number: 4 (lower is better)
Translates to: HWSCNWLSCQLYFRSLPMRRRRG*ANWPPR
Trigger: TCGTGGCGGCCAATTCGCTCAGCCCCTTCGTCTTCT...CATTGGTAGACTCCTAAAATACAGTTGACAACTTAGCCAATTGCAACTCCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR TCA 90 bp GGTTTGTCAGGATCCAAAGTTGAGTCTTGCAAAGTTCCTGCTTGTGCCAGGAAGAAAGCAGTATCACGGTaGCACCGATGGCAGTCACTT +
Preference number: 4 (lower is better)
Translates to: GLSGSKVESCKVPACARKKAVSR*HRWQSL
Trigger: AAGTGACTGCCATCGGTGTCACCGTGATACTGCTTT...CTTCCTGGCACAAGCAGGAACTTTGCAAGACTCAACTTTGGATCCTGACAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454895.2
CDS-3UTR TCA 90 bp GTTTGTCAGGATCCAAAGTTGAGTCTTGCAAAGTTCCTGCTTGTGCCAGGAAGCGAGAAAATGACAGGATaGACAGGTTGTAGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: VCQDPKLSLAKFLLVPGSEKMTG*TGCSRP
Trigger: GGGCCTGCTACAACCTGTTCATCCTGTCATTTTCTC...GCTTCCTGGCACAAGCAGGAACTTTGCAAGACTCAACTTTGGATCCTGACAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454895.2
CDS-3UTR TCA 90 bp TGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTCTACCAATGTGGCACTCACCGATGGCAGTCACTTaGCACACGGAGGAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: CNWLSCQLYFRSLPMWHSPMAVT*HTEEPL
Trigger: CAAGGGCTCCTCCGTGTGTCAAGTGACTGCCATCGG...TGAGTGCCACATTGGTAGACTCCTAAAATACAGTTGACAACTTAGCCAATTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR TCA 90 bp GGTTTGTCAGGATCCAAAGTTGAGTCTTGCAAAGTTCCTGCTTGTGCCAGGAAGAATAAGATCTGGGACTaGATCCATGGCTGGGGACCA +
Preference number: 4 (lower is better)
Translates to: GLSGSKVESCKVPACARKNKIWD*IHGWGP
Trigger: TGGTCCCCAGCCATGGATTCAGTCCCAGATCTTATT...CTTCCTGGCACAAGCAGGAACTTTGCAAGACTCAACTTTGGATCCTGACAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454895.2
CDS-3UTR TCA 90 bp CCCAAACAAATAACACCACTCCAAATAATACGTATCCAGCATCTCCCAGCTGATAGAGCTGCACGTAGATaGACACGAAGAGCAGCGCGT +
Preference number: 4 (lower is better)
Translates to: PKQITPLQIIRIQHLPADRAARR*TRRAAR
Trigger: ACGCGCTGCTCTTCGTGTTCATCTACGTGCAGCTCT...ATCAGCTGGGAGATGCTGGATACGTATTATTTGGAGTGGTGTTATTTGTTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419162.5
CDS-3UTR TCA 90 bp GTTTGTCAGGATCCAAAGTTGAGTCTTGCAAAGTTCCTGCTTGTGCCAGGAAGCGTCAGGATCCAAAGTTaGGTCTTGCAAAGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: VCQDPKLSLAKFLLVPGSVRIQS*VLQSSC
Trigger: GCAGGAACTTTGCAAGACTCAACTTTGGATCCTGAC...GCTTCCTGGCACAAGCAGGAACTTTGCAAGACTCAACTTTGGATCCTGACAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454895.2
CDS-3UTR GCA 90 bp GGTTTGTCAGGATCCAAAGTTGAGTCTTGCAAAGTTCCTGCTTGTGCCAGGAAGGTCTTGCAAAGTTCCTaGTTGTGCCAGGAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: GLSGSKVESCKVPACARKVLQSS*LCQEAV
Trigger: AACAGCTTCCTGGCACAAGCAGGAACTTTGCAAGAC...CTTCCTGGCACAAGCAGGAACTTTGCAAGACTCAACTTTGGATCCTGACAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454895.2
CDS-3UTR CCA 90 bp CACTGGAGTTGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTCTACCAATGCTGGGACTGAATCCATaGCTGGGGACCATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: HWSCNWLSCQLYFRSLPMLGLNP*LGTIPG
Trigger: CCCTGGAATGGTCCCCAGCCATGGATTCAGTCCCAG...CATTGGTAGACTCCTAAAATACAGTTGACAACTTAGCCAATTGCAACTCCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR CCA 90 bp ATAAAACTGTTAACTGATGCTACCCAAGGCTTGGTTTGTCAGGATCCAAAGTTGCTGGGACTGAATCCATaGCTGGGGACCATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: IKLLTDATQGLVCQDPKLLGLNP*LGTIPG
Trigger: CCCTGGAATGGTCCCCAGCCATGGATTCAGTCCCAG...CAACTTTGGATCCTGACAAACCAAGCCTTGGGTAGCATCAGTTAACAGTTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454895.2
CDS-3UTR TCA 90 bp CACTGGAGTTGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTCTACCAATGAGAGCTGCACGTAGATaGACACGAAGAGCAGCGCGT +
Preference number: 4 (lower is better)
Translates to: HWSCNWLSCQLYFRSLPMRAARR*TRRAAR
Trigger: ACGCGCTGCTCTTCGTGTTCATCTACGTGCAGCTCT...CATTGGTAGACTCCTAAAATACAGTTGACAACTTAGCCAATTGCAACTCCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR TCA 90 bp AATTATCAACACTGGAGTTGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTAGACGCTCTGGTAGCTaGGCCGCTTGTGGCGGTAAC +
Preference number: 4 (lower is better)
Translates to: NYQHWSCNWLSCQLYFRSRRSGS*AACGGN
Trigger: GTTACCGCCACAAGCGGCTCAGCTACCAGAGCGTCT...ACTCCTAAAATACAGTTGACAACTTAGCCAATTGCAACTCCAGTGTTGATAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR TCA 90 bp GTTTGTCAGGATCCAAAGTTGAGTCTTGCAAAGTTCCTGCTTGTGCCAGGAAGCGGGGCAACCGGTATTTaGGTAATTCTGGAGAATATT +
Preference number: 4 (lower is better)
Translates to: VCQDPKLSLAKFLLVPGSGATGI*VILENI
Trigger: AATATTCTCCAGAATTACTCAAATACCGGTTGCCCC...GCTTCCTGGCACAAGCAGGAACTTTGCAAGACTCAACTTTGGATCCTGACAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454895.2
CDS-3UTR TCA 90 bp TGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTCTACCAATGTGGCACTCACCAGCATCTCCCAGCTaGTTCTTCAAATCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: CNWLSCQLYFRSLPMWHSPASPS*FFKSAW
Trigger: CCAGGCAGATTTGAAGAATCAGCTGGGAGATGCTGG...TGAGTGCCACATTGGTAGACTCCTAAAATACAGTTGACAACTTAGCCAATTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR TCA 90 bp GTAGGTAAGAGTTCCCAAACAAATAACACCACTCCAAATAATACGTATCCAGCAGAGGGGCAACCTGCGTaGAGTACAAGTTCATCAGCG +
Preference number: 4 (lower is better)
Translates to: VGKSSQTNNTTPNNTYPAEGQPA*STSSSA
Trigger: CGCTGATGAACTTGTACTTCACGCAGGTTGCCCCTC...TGCTGGATACGTATTATTTGGAGTGGTGTTATTTGTTTGGGAACTCTTACCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419162.5
CDS-3UTR TCA 90 bp CAAATAACACCACTCCAAATAATACGTATCCAGCATCTCCCAGCTGATTCTTCAAAAGCAGTATCACGGTaGCACCGATGGCAGTCACTT +
Preference number: 4 (lower is better)
Translates to: QITPLQIIRIQHLPADSSKAVSR*HRWQSL
Trigger: AAGTGACTGCCATCGGTGTCACCGTGATACTGCTTT...TGAAGAATCAGCTGGGAGATGCTGGATACGTATTATTTGGAGTGGTGTTATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419162.5
CDS-3UTR TCA 90 bp GTTTGTCAGGATCCAAAGTTGAGTCTTGCAAAGTTCCTGCTTGTGCCAGGAAGCCTTGTTCTGAGAAAATaGCAGGATGAACAGGTTGTA +
Preference number: 4 (lower is better)
Translates to: VCQDPKLSLAKFLLVPGSLVLRK*QDEQVV
Trigger: TACAACCTGTTCATCCTGTCATTTTCTCAGAACAAG...GCTTCCTGGCACAAGCAGGAACTTTGCAAGACTCAACTTTGGATCCTGACAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454895.2
CDS-3UTR TCA 90 bp TGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTCTACCAATGTGGCACTCAAATAAGATCTGGGACTaGATCCATGGCTGGGGACCA +
Preference number: 4 (lower is better)
Translates to: CNWLSCQLYFRSLPMWHSNKIWD*IHGWGP
Trigger: TGGTCCCCAGCCATGGATTCAGTCCCAGATCTTATT...TGAGTGCCACATTGGTAGACTCCTAAAATACAGTTGACAACTTAGCCAATTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR TCA 90 bp GTAGGTAAGAGTTCCCAAACAAATAACACCACTCCAAATAATACGTATCCAGCAGAGAAAATGACAGGATaGACAGGTTGTAGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: VGKSSQTNNTTPNNTYPAEKMTG*TGCSRP
Trigger: GGGCCTGCTACAACCTGTTCATCCTGTCATTTTCTC...TGCTGGATACGTATTATTTGGAGTGGTGTTATTTGTTTGGGAACTCTTACCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419162.5
CDS-3UTR TCA 90 bp AAACTGTTAACTGATGCTACCCAAGGCTTGGTTTGTCAGGATCCAAAGTTGAGTTGGACGCTCTTGTTCTaGGAAAATGACAGGATGAAC +
Preference number: 4 (lower is better)
Translates to: KLLTDATQGLVCQDPKLSWTLLF*ENDRMN
Trigger: GTTCATCCTGTCATTTTCTCAGAACAAGAGCGTCCA...ACTCAACTTTGGATCCTGACAAACCAAGCCTTGGGTAGCATCAGTTAACAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454895.2
CDS-3UTR TCA 90 bp TGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTCTACCAATGTGGCACTCAGTCAGGATCCAAAGTTaGGTCTTGCAAAGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: CNWLSCQLYFRSLPMWHSVRIQS*VLQSSC
Trigger: GCAGGAACTTTGCAAGACTCAACTTTGGATCCTGAC...TGAGTGCCACATTGGTAGACTCCTAAAATACAGTTGACAACTTAGCCAATTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR GCA 90 bp CACTGGAGTTGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTCTACCAATGGTCTTGCAAAGTTCCTaGTTGTGCCAGGAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: HWSCNWLSCQLYFRSLPMVLQSS*LCQEAV
Trigger: AACAGCTTCCTGGCACAAGCAGGAACTTTGCAAGAC...CATTGGTAGACTCCTAAAATACAGTTGACAACTTAGCCAATTGCAACTCCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR GCA 90 bp AAACTGTTAACTGATGCTACCCAAGGCTTGGTTTGTCAGGATCCAAAGTTGAGTTCCAAAGTTGAGTCTTaGAAAGTTCCTGCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: KLLTDATQGLVCQDPKLSSKVES*KVPACA
Trigger: GGCACAAGCAGGAACTTTGCAAGACTCAACTTTGGA...ACTCAACTTTGGATCCTGACAAACCAAGCCTTGGGTAGCATCAGTTAACAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454895.2
CDS-3UTR GCA 90 bp GGTTTGTCAGGATCCAAAGTTGAGTCTTGCAAAGTTCCTGCTTGTGCCAGGAAGATCAGTCTACATTATTaGTTATTCCTATGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: GLSGSKVESCKVPACARKISLHY*LFLWGH
Trigger: ATGGCCCCATAGGAATAAGCAATAATGTAGACTGAT...CTTCCTGGCACAAGCAGGAACTTTGCAAGACTCAACTTTGGATCCTGACAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454895.2
CDS-3UTR CCA 90 bp GTTTGTCAGGATCCAAAGTTGAGTCTTGCAAAGTTCCTGCTTGTGCCAGGAAGCTTCCTATGGGGCCATTaGAAACCTGTAACAAATAAA +
Preference number: 4 (lower is better)
Translates to: VCQDPKLSLAKFLLVPGSFLWGH*KPVTNK
Trigger: TTTATTTGTTACAGGTTTCCAATGGCCCCATAGGAA...GCTTCCTGGCACAAGCAGGAACTTTGCAAGACTCAACTTTGGATCCTGACAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454895.2
3UTR CAA 72 bp TCGTCCATAAAACTGTTAACTGATGCTACCCAAGGCTaGGTTTGTCAGGATCCAAAGTTGAGTCTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: SSIKLLTDATQG*VCQDPKLSLAK
Trigger: CTTTGCAAGACTCAACTTTGGATCCTGACAAACCAAGCCTTGGGTAGCATCAGTTAACAGTTTTATGGACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454895.2
CDS-3UTR TCA 90 bp TGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTCTACCAATGTGGCACTCATGGACGCTCTTGTTCTaGGAAAATGACAGGATGAAC +
Preference number: 4 (lower is better)
Translates to: CNWLSCQLYFRSLPMWHSWTLLF*ENDRMN
Trigger: GTTCATCCTGTCATTTTCTCAGAACAAGAGCGTCCA...TGAGTGCCACATTGGTAGACTCCTAAAATACAGTTGACAACTTAGCCAATTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR TCA 90 bp AAGGTGGTAGGTAAGAGTTCCCAAACAAATAACACCACTCCAAATAATACGTATAATAAGATCTGGGACTaGATCCATGGCTGGGGACCA +
Preference number: 4 (lower is better)
Translates to: KVVGKSSQTNNTTPNNTYNKIWD*IHGWGP
Trigger: TGGTCCCCAGCCATGGATTCAGTCCCAGATCTTATT...ATACGTATTATTTGGAGTGGTGTTATTTGTTTGGGAACTCTTACCTACCACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419162.5
CDS-3UTR TCA 90 bp TCATCTGAGGAATCGTCCATAAAACTGTTAACTGATGCTACCCAAGGCTTGGTTCATAAAACTGTTAACTaGTGCTACCCAAGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: SSEESSIKLLTDATQGLVHKTVN*CYPRLG
Trigger: ACCAAGCCTTGGGTAGCATCAGTTAACAGTTTTATG...AACCAAGCCTTGGGTAGCATCAGTTAACAGTTTTATGGACGATTCCTCAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454895.2
CDS-3UTR GCA 90 bp CACTGGAGTTGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTCTACCAATGCAAAGTTCCTGCTTGTaGCAGGAAGCTGTTAGTTTG +
Preference number: 4 (lower is better)
Translates to: HWSCNWLSCQLYFRSLPMQSSCL*QEAVSL
Trigger: CAAACTAACAGCTTCCTGGCACAAGCAGGAACTTTG...CATTGGTAGACTCCTAAAATACAGTTGACAACTTAGCCAATTGCAACTCCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR CCA 90 bp TGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTCTACCAATGTGGCACTCAATGCTACCCAAGGCTTaGTTTGTCAGGATCCAAAGT +
Preference number: 4 (lower is better)
Translates to: CNWLSCQLYFRSLPMWHSMLPKA*FVRIQS
Trigger: ACTTTGGATCCTGACAAACCAAGCCTTGGGTAGCAT...TGAGTGCCACATTGGTAGACTCCTAAAATACAGTTGACAACTTAGCCAATTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR CCA 90 bp ATAAAACTGTTAACTGATGCTACCCAAGGCTTGGTTTGTCAGGATCCAAAGTTGATGCTACCCAAGGCTTaGTTTGTCAGGATCCAAAGT +
Preference number: 4 (lower is better)
Translates to: IKLLTDATQGLVCQDPKLMLPKA*FVRIQS
Trigger: ACTTTGGATCCTGACAAACCAAGCCTTGGGTAGCAT...CAACTTTGGATCCTGACAAACCAAGCCTTGGGTAGCATCAGTTAACAGTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454895.2
CDS-3UTR TCA 90 bp AATTATCAACACTGGAGTTGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTAAAGCAGTATCACGGTaGCACCGATGGCAGTCACTT +
Preference number: 4 (lower is better)
Translates to: NYQHWSCNWLSCQLYFRSKAVSR*HRWQSL
Trigger: AAGTGACTGCCATCGGTGTCACCGTGATACTGCTTT...ACTCCTAAAATACAGTTGACAACTTAGCCAATTGCAACTCCAGTGTTGATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR TCA 90 bp AATTATCAACACTGGAGTTGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTGAGAAAATGACAGGATaGACAGGTTGTAGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: NYQHWSCNWLSCQLYFRSEKMTG*TGCSRP
Trigger: GGGCCTGCTACAACCTGTTCATCCTGTCATTTTCTC...ACTCCTAAAATACAGTTGACAACTTAGCCAATTGCAACTCCAGTGTTGATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR TCA 90 bp GTAGGTAAGAGTTCCCAAACAAATAACACCACTCCAAATAATACGTATCCAGCATGGACGCTCTTGTTCTaGGAAAATGACAGGATGAAC +
Preference number: 4 (lower is better)
Translates to: VGKSSQTNNTTPNNTYPAWTLLF*ENDRMN
Trigger: GTTCATCCTGTCATTTTCTCAGAACAAGAGCGTCCA...TGCTGGATACGTATTATTTGGAGTGGTGTTATTTGTTTGGGAACTCTTACCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419162.5
CDS-3UTR TCA 90 bp CACTGGAGTTGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTCTACCAATGCAAATCTGCCTGGTCTaGTACATTGTACCAGTCATA +
Preference number: 4 (lower is better)
Translates to: HWSCNWLSCQLYFRSLPMQICLV*YIVPVI
Trigger: TATGACTGGTACAATGTATCAGACCAGGCAGATTTG...CATTGGTAGACTCCTAAAATACAGTTGACAACTTAGCCAATTGCAACTCCAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR TCA 90 bp CACTGGAGTTGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTCTACCAATGCATAAAACTGTTAACTaGTGCTACCCAAGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: HWSCNWLSCQLYFRSLPMHKTVN*CYPRLG
Trigger: ACCAAGCCTTGGGTAGCATCAGTTAACAGTTTTATG...CATTGGTAGACTCCTAAAATACAGTTGACAACTTAGCCAATTGCAACTCCAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR TCA 90 bp AAACTGTTAACTGATGCTACCCAAGGCTTGGTTTGTCAGGATCCAAAGTTGAGTCTGAAGCTTTTCATCTaGGGAATCGTCCATAAAACT +
Preference number: 4 (lower is better)
Translates to: KLLTDATQGLVCQDPKLSLKLFI*GIVHKT
Trigger: AGTTTTATGGACGATTCCTCAGATGAAAAGCTTCAG...ACTCAACTTTGGATCCTGACAAACCAAGCCTTGGGTAGCATCAGTTAACAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454895.2
CDS-3UTR TCA 90 bp TCATCTGAGGAATCGTCCATAAAACTGTTAACTGATGCTACCCAAGGCTTGGTTTTAAATTATACCCACTaGAATAGCAAGGCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: SSEESSIKLLTDATQGLVLNYTH*NSKAPS
Trigger: AGAGGGAGCCTTGCTATTTCAGTGGGTATAATTTAA...AACCAAGCCTTGGGTAGCATCAGTTAACAGTTTTATGGACGATTCCTCAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454895.2
CDS-3UTR CCA 90 bp AGTCTACATTATTGCTTATTCCTATGGGGCCATTGGAAACCTGTAACAAATAAAACACGGAGGAGCCCTTaGACTCCAAGTAAATGTTGG +
Preference number: 4 (lower is better)
Translates to: SLHYCLFLWGHWKPVTNKTRRSP*TPSKCW
Trigger: CCAACATTTACTTGGAGTCCAAGGGCTCCTCCGTGT...TTTATTTGTTACAGGTTTCCAATGGCCCCATAGGAATAAGCAATAATGTAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366592.8
ENST00000454895.2
CDS-3UTR CCA 90 bp AAACTGTTAACTGATGCTACCCAAGGCTTGGTTTGTCAGGATCCAAAGTTGAGTTATTGCTTATTCCTATaGGGCCATTGGAAACCTGTA +
Preference number: 4 (lower is better)
Translates to: KLLTDATQGLVCQDPKLSYCLFL*GHWKPV
Trigger: TACAGGTTTCCAATGGCCCCATAGGAATAAGCAATA...ACTCAACTTTGGATCCTGACAAACCAAGCCTTGGGTAGCATCAGTTAACAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454895.2
CDS-3UTR TCA 90 bp TGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTCTACCAATGTGGCACTCACTTGTTCTGAGAAAATaGCAGGATGAACAGGTTGTA +
Preference number: 4 (lower is better)
Translates to: CNWLSCQLYFRSLPMWHSLVLRK*QDEQVV
Trigger: TACAACCTGTTCATCCTGTCATTTTCTCAGAACAAG...TGAGTGCCACATTGGTAGACTCCTAAAATACAGTTGACAACTTAGCCAATTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR CCA 90 bp AGAGTTCCCAAACAAATAACACCACTCCAAATAATACGTATCCAGCATCTCCCATTCTTCAAATCTGCCTaGTCTGATACATTGTACCAG +
Preference number: 4 (lower is better)
Translates to: RVPKQITPLQIIRIQHLPFFKSA*SDTLYQ
Trigger: CTGGTACAATGTATCAGACCAGGCAGATTTGAAGAA...TGGGAGATGCTGGATACGTATTATTTGGAGTGGTGTTATTTGTTTGGGAACTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419162.5
CDS-3UTR TCA 90 bp AATTATCAACACTGGAGTTGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTACATTAGCGCCCTACTaGAAGGAAGTACCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: NYQHWSCNWLSCQLYFRSTLAPY*KEVPVF
Trigger: AAAGACTGGTACTTCCTTTCAGTAGGGCGCTAATGT...ACTCCTAAAATACAGTTGACAACTTAGCCAATTGCAACTCCAGTGTTGATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR GCA 90 bp AGTCTACATTATTGCTTATTCCTATGGGGCCATTGGAAACCTGTAACAAATAAATCCAAAGTTGAGTCTTaGAAAGTTCCTGCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: SLHYCLFLWGHWKPVTNKSKVES*KVPACA
Trigger: GGCACAAGCAGGAACTTTGCAAGACTCAACTTTGGA...TTTATTTGTTACAGGTTTCCAATGGCCCCATAGGAATAAGCAATAATGTAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366592.8
ENST00000454895.2
CDS-3UTR GCA 90 bp TGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTCTACCAATGTGGCACTCAATCAGTCTACATTATTaGTTATTCCTATGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: CNWLSCQLYFRSLPMWHSISLHY*LFLWGH
Trigger: ATGGCCCCATAGGAATAAGCAATAATGTAGACTGAT...TGAGTGCCACATTGGTAGACTCCTAAAATACAGTTGACAACTTAGCCAATTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR CCA 90 bp CACTGGAGTTGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTCTACCAATGTTCCTATGGGGCCATTaGAAACCTGTAACAAATAAA +
Preference number: 4 (lower is better)
Translates to: HWSCNWLSCQLYFRSLPMFLWGH*KPVTNK
Trigger: TTTATTTGTTACAGGTTTCCAATGGCCCCATAGGAA...CATTGGTAGACTCCTAAAATACAGTTGACAACTTAGCCAATTGCAACTCCAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR TCA 90 bp AATTATCAACACTGGAGTTGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTGGGGCAACCGGTATTTaGGTAATTCTGGAGAATATT +
Preference number: 4 (lower is better)
Translates to: NYQHWSCNWLSCQLYFRSGATGI*VILENI
Trigger: AATATTCTCCAGAATTACTCAAATACCGGTTGCCCC...ACTCCTAAAATACAGTTGACAACTTAGCCAATTGCAACTCCAGTGTTGATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR TCA 90 bp AGTCTACATTATTGCTTATTCCTATGGGGCCATTGGAAACCTGTAACAAATAAACAAATCTGCCTGGTCTaGTACATTGTACCAGTCATA +
Preference number: 4 (lower is better)
Translates to: SLHYCLFLWGHWKPVTNKQICLV*YIVPVI
Trigger: TATGACTGGTACAATGTATCAGACCAGGCAGATTTG...TTTATTTGTTACAGGTTTCCAATGGCCCCATAGGAATAAGCAATAATGTAGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366592.8
ENST00000454895.2
CDS-3UTR TCA 90 bp AGTCTACATTATTGCTTATTCCTATGGGGCCATTGGAAACCTGTAACAAATAAAGTCACTATGCTTTTCTaGAGCTTTTCATCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: SLHYCLFLWGHWKPVTNKVTMLF*SFSSEE
Trigger: TTCCTCAGATGAAAAGCTTCAGAAAAGCATAGTGAC...TTTATTTGTTACAGGTTTCCAATGGCCCCATAGGAATAAGCAATAATGTAGACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366592.8
ENST00000454895.2
CDS-3UTR TCA 90 bp AGTCTACATTATTGCTTATTCCTATGGGGCCATTGGAAACCTGTAACAAATAAATTAAATTATACCCACTaGAATAGCAAGGCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: SLHYCLFLWGHWKPVTNKLNYTH*NSKAPS
Trigger: AGAGGGAGCCTTGCTATTTCAGTGGGTATAATTTAA...TTTATTTGTTACAGGTTTCCAATGGCCCCATAGGAATAAGCAATAATGTAGACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366592.8
ENST00000454895.2
CDS-3UTR CCA 90 bp AATTATCAACACTGGAGTTGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTTTCTTCAAATCTGCCTaGTCTGATACATTGTACCAG +
Preference number: 4 (lower is better)
Translates to: NYQHWSCNWLSCQLYFRSFFKSA*SDTLYQ
Trigger: CTGGTACAATGTATCAGACCAGGCAGATTTGAAGAA...ACTCCTAAAATACAGTTGACAACTTAGCCAATTGCAACTCCAGTGTTGATAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR CCA 90 bp AGTCTACATTATTGCTTATTCCTATGGGGCCATTGGAAACCTGTAACAAATAAATTCTTCAAATCTGCCTaGTCTGATACATTGTACCAG +
Preference number: 4 (lower is better)
Translates to: SLHYCLFLWGHWKPVTNKFFKSA*SDTLYQ
Trigger: CTGGTACAATGTATCAGACCAGGCAGATTTGAAGAA...TTTATTTGTTACAGGTTTCCAATGGCCCCATAGGAATAAGCAATAATGTAGACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366592.8
ENST00000454895.2
CDS-3UTR CCA 90 bp AATTATCAACACTGGAGTTGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTTATTGCTTATTCCTATaGGGCCATTGGAAACCTGTA +
Preference number: 4 (lower is better)
Translates to: NYQHWSCNWLSCQLYFRSYCLFL*GHWKPV
Trigger: TACAGGTTTCCAATGGCCCCATAGGAATAAGCAATA...ACTCCTAAAATACAGTTGACAACTTAGCCAATTGCAACTCCAGTGTTGATAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR CCA 90 bp AATTATCAACACTGGAGTTGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTGGAAGTACCAGTCTTTaGGCAAAACTTAAGAGATTC +
Preference number: 4 (lower is better)
Translates to: NYQHWSCNWLSCQLYFRSGSTSL*AKLKRF
Trigger: GAATCTCTTAAGTTTTGCCCAAAGACTGGTACTTCC...ACTCCTAAAATACAGTTGACAACTTAGCCAATTGCAACTCCAGTGTTGATAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR GCA 90 bp AATTATCAACACTGGAGTTGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTTATCAACACTGGAGTTaGAATTGGCTAAGTTGTCAA +
Preference number: 4 (lower is better)
Translates to: NYQHWSCNWLSCQLYFRSYQHWS*NWLSCQ
Trigger: TTGACAACTTAGCCAATTGCAACTCCAGTGTTGATA...ACTCCTAAAATACAGTTGACAACTTAGCCAATTGCAACTCCAGTGTTGATAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366592.8
3UTR CAA 72 bp TTTAGTACTAAAATAAGGGTTTATCAGTCTACATTATaGCTTATTCCTATGGGGCCATTGGAAACCTGTAAC +
Preference number: 4 (lower is better)
Translates to: FSTKIRVYQSTL*LIPMGPLETCN
Trigger: GTTACAGGTTTCCAATGGCCCCATAGGAATAAGCAATAATGTAGACTGATAAACCCTTATTTTAGTACTAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366592.8
ENST00000454895.2
CDS-3UTR GCA 90 bp AGTCTACATTATTGCTTATTCCTATGGGGCCATTGGAAACCTGTAACAAATAAAAAAGACCTTACAGTCTaGTGCTTTACCATTTCATTT +
Preference number: 4 (lower is better)
Translates to: SLHYCLFLWGHWKPVTNKKDLTV*CFTISF
Trigger: AAATGAAATGGTAAAGCAGCAGACTGTAAGGTCTTT...TTTATTTGTTACAGGTTTCCAATGGCCCCATAGGAATAAGCAATAATGTAGACT
34% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR CAA 90 bp CAGTATCACGGTGACACCGATGGCAGTCACTTGACACACGGAGGAGCCCTTGGAGGCGGCAGCGAGTCGTaGCGGGCTGGGTCCCACGGC +
Preference number: 5 (lower is better)
Translates to: QYHGDTDGSHLTHGGALGGGSES*RAGSHG
Trigger: GCCGTGGGACCCAGCCCGCAACGACTCGCTGCCGCC...TCCAAGGGCTCCTCCGTGTGTCAAGTGACTGCCATCGGTGTCACCGTGATACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419162.5
CDS-3UTR CAA 90 bp GGCCCGAGAGGTGTAAAGCAGTATCACGGTGACACCGATGGCAGTCACTTGACAACCGATGGCAGTCACTaGACACACGGAGGAGCCCTT +
Preference number: 5 (lower is better)
Translates to: GPRGVKQYHGDTDGSHLTTDGSH*THGGAL
Trigger: AAGGGCTCCTCCGTGTGTCAAGTGACTGCCATCGGT...TGTCAAGTGACTGCCATCGGTGTCACCGTGATACTGCTTTACACCTCTCGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419162.5
CDS-3UTR CAA 90 bp CACTGGAGTTGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTCTACCAATGGGCGGCAGCGAGTCGTaGCGGGCTGGGTCCCACGGC +
Preference number: 5 (lower is better)
Translates to: HWSCNWLSCQLYFRSLPMGGSES*RAGSHG
Trigger: GCCGTGGGACCCAGCCCGCAACGACTCGCTGCCGCC...CATTGGTAGACTCCTAAAATACAGTTGACAACTTAGCCAATTGCAACTCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR CAA 90 bp CGATGGCAGTCACTTGACACACGGAGGAGCCCTTGGACTCCAAGTAAATGTTGGAAGGGGCTGAGCGAATaGGCCGCCACGAAGTCTTTG +
Preference number: 5 (lower is better)
Translates to: RWQSLDTRRSPWTPSKCWKGLSE*AATKSL
Trigger: CAAAGACTTCGTGGCGGCCAATTCGCTCAGCCCCTT...CCAACATTTACTTGGAGTCCAAGGGCTCCTCCGTGTGTCAAGTGACTGCCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419162.5
CDS-3UTR CAA 90 bp GTTTGTCAGGATCCAAAGTTGAGTCTTGCAAAGTTCCTGCTTGTGCCAGGAAGCACCGATGGCAGTCACTaGACACACGGAGGAGCCCTT +
Preference number: 5 (lower is better)
Translates to: VCQDPKLSLAKFLLVPGSTDGSH*THGGAL
Trigger: AAGGGCTCCTCCGTGTGTCAAGTGACTGCCATCGGT...GCTTCCTGGCACAAGCAGGAACTTTGCAAGACTCAACTTTGGATCCTGACAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454895.2
CDS-3UTR CAA 90 bp CACTGGAGTTGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTCTACCAATGAAGGGGCTGAGCGAATaGGCCGCCACGAAGTCTTTG +
Preference number: 5 (lower is better)
Translates to: HWSCNWLSCQLYFRSLPMKGLSE*AATKSL
Trigger: CAAAGACTTCGTGGCGGCCAATTCGCTCAGCCCCTT...CATTGGTAGACTCCTAAAATACAGTTGACAACTTAGCCAATTGCAACTCCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR CAA 90 bp CACTGGAGTTGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTCTACCAATGACCGATGGCAGTCACTaGACACACGGAGGAGCCCTT +
Preference number: 5 (lower is better)
Translates to: HWSCNWLSCQLYFRSLPMTDGSH*THGGAL
Trigger: AAGGGCTCCTCCGTGTGTCAAGTGACTGCCATCGGT...CATTGGTAGACTCCTAAAATACAGTTGACAACTTAGCCAATTGCAACTCCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR CAA 90 bp GGTTTGTCAGGATCCAAAGTTGAGTCTTGCAAAGTTCCTGCTTGTGCCAGGAAGAGGGGCAACCGGTATTaGAGTAATTCTGGAGAATAT +
Preference number: 5 (lower is better)
Translates to: GLSGSKVESCKVPACARKRGNRY*SNSGEY
Trigger: ATATTCTCCAGAATTACTCAAATACCGGTTGCCCCT...CTTCCTGGCACAAGCAGGAACTTTGCAAGACTCAACTTTGGATCCTGACAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454895.2
CDS-3UTR CAA 90 bp TGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTCTACCAATGTGGCACTCAGATGCTACCCAAGGCTaGGTTTGTCAGGATCCAAAG +
Preference number: 5 (lower is better)
Translates to: CNWLSCQLYFRSLPMWHSDATQG*VCQDPK
Trigger: CTTTGGATCCTGACAAACCAAGCCTTGGGTAGCATC...TGAGTGCCACATTGGTAGACTCCTAAAATACAGTTGACAACTTAGCCAATTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR CAA 90 bp ATAAAACTGTTAACTGATGCTACCCAAGGCTTGGTTTGTCAGGATCCAAAGTTGTTGCAAAGTTCCTGCTaGTGCCAGGAAGCTGTTAGT +
Preference number: 5 (lower is better)
Translates to: IKLLTDATQGLVCQDPKLLQSSC*CQEAVS
Trigger: ACTAACAGCTTCCTGGCACAAGCAGGAACTTTGCAA...CAACTTTGGATCCTGACAAACCAAGCCTTGGGTAGCATCAGTTAACAGTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454895.2
CDS-3UTR CAA 90 bp TCATCTGAGGAATCGTCCATAAAACTGTTAACTGATGCTACCCAAGGCTTGGTTCAGGAAGCTGTTAGTTaGTTGTCCCCAATCATAGTA +
Preference number: 5 (lower is better)
Translates to: SSEESSIKLLTDATQGLVQEAVS*LSPIIV
Trigger: TACTATGATTGGGGACAACAAACTAACAGCTTCCTG...AACCAAGCCTTGGGTAGCATCAGTTAACAGTTTTATGGACGATTCCTCAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454895.2
CDS-3UTR CAA 90 bp CACTGGAGTTGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTCTACCAATGAACTTAAGAGATTCCTaGAGGAACCTACGGCCTGAA +
Preference number: 5 (lower is better)
Translates to: HWSCNWLSCQLYFRSLPMNLRDS*RNLRPE
Trigger: TTCAGGCCGTAGGTTCCTCAAGGAATCTCTTAAGTT...CATTGGTAGACTCCTAAAATACAGTTGACAACTTAGCCAATTGCAACTCCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR CAA 90 bp TGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTCTACCAATGTGGCACTCAAGGGGCAACCGGTATTaGAGTAATTCTGGAGAATAT +
Preference number: 5 (lower is better)
Translates to: CNWLSCQLYFRSLPMWHSRGNRY*SNSGEY
Trigger: ATATTCTCCAGAATTACTCAAATACCGGTTGCCCCT...TGAGTGCCACATTGGTAGACTCCTAAAATACAGTTGACAACTTAGCCAATTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR CAA 90 bp AAACTGTTAACTGATGCTACCCAAGGCTTGGTTTGTCAGGATCCAAAGTTGAGTGAAGCTGTTAGTTTGTaGTCCCCAATCATAGTAATC +
Preference number: 5 (lower is better)
Translates to: KLLTDATQGLVCQDPKLSEAVSL*SPIIVI
Trigger: GATTACTATGATTGGGGACAACAAACTAACAGCTTC...ACTCAACTTTGGATCCTGACAAACCAAGCCTTGGGTAGCATCAGTTAACAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454895.2
CDS-3UTR CAA 90 bp AGTCTACATTATTGCTTATTCCTATGGGGCCATTGGAAACCTGTAACAAATAAAGATGCTACCCAAGGCTaGGTTTGTCAGGATCCAAAG +
Preference number: 5 (lower is better)
Translates to: SLHYCLFLWGHWKPVTNKDATQG*VCQDPK
Trigger: CTTTGGATCCTGACAAACCAAGCCTTGGGTAGCATC...TTTATTTGTTACAGGTTTCCAATGGCCCCATAGGAATAAGCAATAATGTAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366592.8
ENST00000454895.2
CDS-3UTR CAA 90 bp AAACTGTTAACTGATGCTACCCAAGGCTTGGTTTGTCAGGATCCAAAGTTGAGTTATCAGTCTACATTATaGCTTATTCCTATGGGGCCA +
Preference number: 5 (lower is better)
Translates to: KLLTDATQGLVCQDPKLSYQSTL*LIPMGP
Trigger: TGGCCCCATAGGAATAAGCAATAATGTAGACTGATA...ACTCAACTTTGGATCCTGACAAACCAAGCCTTGGGTAGCATCAGTTAACAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454895.2
CDS-3UTR CAA 90 bp CACTGGAGTTGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTCTACCAATGTATTTTGACTTGGCTTaGAAAATCACCTGCGTGAAG +
Preference number: 5 (lower is better)
Translates to: HWSCNWLSCQLYFRSLPMYFDLA*KITCVK
Trigger: CTTCACGCAGGTGATTTTCAAAGCCAAGTCAAAATA...CATTGGTAGACTCCTAAAATACAGTTGACAACTTAGCCAATTGCAACTCCAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR CAA 90 bp AGTCTACATTATTGCTTATTCCTATGGGGCCATTGGAAACCTGTAACAAATAAATTGCAAAGTTCCTGCTaGTGCCAGGAAGCTGTTAGT +
Preference number: 5 (lower is better)
Translates to: SLHYCLFLWGHWKPVTNKLQSSC*CQEAVS
Trigger: ACTAACAGCTTCCTGGCACAAGCAGGAACTTTGCAA...TTTATTTGTTACAGGTTTCCAATGGCCCCATAGGAATAAGCAATAATGTAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366592.8
ENST00000454895.2
CDS-3UTR CAA 90 bp AGTCTACATTATTGCTTATTCCTATGGGGCCATTGGAAACCTGTAACAAATAAATACCCAAGGCTTGGTTaGTCAGGATCCAAAGTTGAG +
Preference number: 5 (lower is better)
Translates to: SLHYCLFLWGHWKPVTNKYPRLG*SGSKVE
Trigger: CTCAACTTTGGATCCTGACAAACCAAGCCTTGGGTA...TTTATTTGTTACAGGTTTCCAATGGCCCCATAGGAATAAGCAATAATGTAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366592.8
ENST00000454895.2
CDS-3UTR CAA 90 bp TGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTCTACCAATGTGGCACTCATTATCAACACTGGAGTaGCAATTGGCTAAGTTGTCA +
Preference number: 5 (lower is better)
Translates to: CNWLSCQLYFRSLPMWHSLSTLE*QLAKLS
Trigger: TGACAACTTAGCCAATTGCAACTCCAGTGTTGATAA...TGAGTGCCACATTGGTAGACTCCTAAAATACAGTTGACAACTTAGCCAATTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR CAA 90 bp AGTCTACATTATTGCTTATTCCTATGGGGCCATTGGAAACCTGTAACAAATAAACAGGAAGCTGTTAGTTaGTTGTCCCCAATCATAGTA +
Preference number: 5 (lower is better)
Translates to: SLHYCLFLWGHWKPVTNKQEAVS*LSPIIV
Trigger: TACTATGATTGGGGACAACAAACTAACAGCTTCCTG...TTTATTTGTTACAGGTTTCCAATGGCCCCATAGGAATAAGCAATAATGTAGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366592.8
ENST00000454895.2
CDS-3UTR CAA 90 bp AATTATCAACACTGGAGTTGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTACACTGGAGTTGCAATaGGCTAAGTTGTCAACTGTA +
Preference number: 5 (lower is better)
Translates to: NYQHWSCNWLSCQLYFRSTLELQ*AKLSTV
Trigger: TACAGTTGACAACTTAGCCAATTGCAACTCCAGTGT...ACTCCTAAAATACAGTTGACAACTTAGCCAATTGCAACTCCAGTGTTGATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR CAA 90 bp AATTATCAACACTGGAGTTGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTGAAGCTGTTAGTTTGTaGTCCCCAATCATAGTAATC +
Preference number: 5 (lower is better)
Translates to: NYQHWSCNWLSCQLYFRSEAVSL*SPIIVI
Trigger: GATTACTATGATTGGGGACAACAAACTAACAGCTTC...ACTCCTAAAATACAGTTGACAACTTAGCCAATTGCAACTCCAGTGTTGATAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366592.8
CDS-3UTR CAA 90 bp AATTATCAACACTGGAGTTGCAATTGGCTAAGTTGTCAACTGTATTTTAGGAGTTATCAGTCTACATTATaGCTTATTCCTATGGGGCCA +
Preference number: 5 (lower is better)
Translates to: NYQHWSCNWLSCQLYFRSYQSTL*LIPMGP
Trigger: TGGCCCCATAGGAATAAGCAATAATGTAGACTGATA...ACTCCTAAAATACAGTTGACAACTTAGCCAATTGCAACTCCAGTGTTGATAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366592.8