RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPR132 (Homo sapiens)

Ensembl gene IDs: ENSG00000183484

Ensembl transcript IDs: ENST00000329797.8, ENST00000392585.2, ENST00000539291.6, ENST00000549990.1, ENST00000551869.1

Found 806 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGGGCACTGGGCTCCCCATGCAGGTGCTGCGTCTGCCCGGCTCTGTaGTCTGAGTGCATGCGATGTGCCCGAGGTGTCGGGGCAGGGAGG +
Preference number: 1 (lower is better)
Translates to: RALGSPCRCCVCPAL*SECMRCARGVGAGR
Trigger: CCTCCCTGCCCCGACACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCAGCACCTGCATGGGGAGCCCAGTGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR GCA 90 bp ACCCAACCCCAGATGAGGGCGCCTGCCCCCTTGGAGGTGGTAGGCTaGCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCC +
Preference number: 1 (lower is better)
Translates to: TQPQMRAPAPLEVVG*PMPSWALPQCWVTS
Trigger: GGAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCCCTCATCTGGGGTTGGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR GCA 90 bp GAGGCCCTCCAGCTCAGCACAGACCCAACCCCAGATGAGGGCGCCTaGCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCT +
Preference number: 1 (lower is better)
Translates to: EALQLSTDPTPDEGA*PLGGGRLPYALLGA
Trigger: AGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCCCTCATCTGGGGTTGGGTCTGTGCTGAGCTGGAGGGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR CCA 90 bp TGCCCTGCAGTACCTGCAGCAGCGCCAGCCACGCAGTCAGGCAGTTaGCCGGCACCCCCAGCGTGCACACCGCGCTGTACACCACGACCA +
Preference number: 1 (lower is better)
Translates to: CPAVPAAAPATQSGS*PAPPACTPRCTPRP
Trigger: TGGTCGTGGTGTACAGCGCGGTGTGCACGCTGGGGGTGCCGGCCAACTGCCTGACTGCGTGGCTGGCGCTGCTGCAGGTACTGCAGGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR GCA 90 bp CCTGTGCTGTGCCGGGCACTGGGCTCCCCATGCAGGTGCTGCGTCTaGCCGGCTCTGTGCTCTGAGTGCATGCGATGTGCCCGAGGTGTC +
Preference number: 1 (lower is better)
Translates to: PVLCRALGSPCRCCV*PALCSECMRCARGV
Trigger: GACACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCAGCACCTGCATGGGGAGCCCAGTGCCCGGCACAGCACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR TCA 90 bp TCCTGCCAACTGTTGTTCTGGGCGTGGACATTTGGGGCTCCCCGTTaGGGACGCCTGGGCTGCGCTCTGGGAGCCAGCAGCTGGCCACCC +
Preference number: 1 (lower is better)
Translates to: SCQLLFWAWTFGAPR*GRLGCALGASSWPP
Trigger: GGGTGGCCAGCTGCTGGCTCCCAGAGCGCAGCCCAGGCGTCCTCAACGGGGAGCCCCAAATGTCCACGCCCAGAACAACAGTTGGCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR TCA 90 bp ACTGGGCTCCCCATGCAGGTGCTGCGTCTGCCCGGCTCTGTGCTCTaGGTGCATGCGATGTGCCCGAGGTGTCGGGGCAGGGAGGAGGAT +
Preference number: 1 (lower is better)
Translates to: TGLPMQVLRLPGSVL*VHAMCPRCRGREED
Trigger: ATCCTCCTCCCTGCCCCGACACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCAGCACCTGCATGGGGAGCCCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR GCA 90 bp AGCCAAGGGAGCCAGCCAGGCAGGCTGCTGATGAAGAGGCCCCACTaGCTGCCACATGCTCTCTGGGCTCCCGGAAGCCTGGAGGTGTCG +
Preference number: 1 (lower is better)
Translates to: SQGSQPGRLLMKRPH*LPHALWAPGSLEVS
Trigger: CGACACCTCCAGGCTTCCGGGAGCCCAGAGAGCATGTGGCAGGCAGTGGGGCCTCTTCATCAGCAGCCTGCCTGGCTGGCTCCCTTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR GCA 90 bp GCAGCGCCAGCCACGCAGTCAGGCAGTTGGCCGGCACCCCCAGCGTaGACACCGCGCTGTACACCACGACCAGGACTATCCTGCTCTCTT +
Preference number: 1 (lower is better)
Translates to: AAPATQSGSWPAPPA*TPRCTPRPGLSCSL
Trigger: AAGAGAGCAGGATAGTCCTGGTCGTGGTGTACAGCGCGGTGTGCACGCTGGGGGTGCCGGCCAACTGCCTGACTGCGTGGCTGGCGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR GCA 90 bp GCAGCTCGCAGAGTGCCAGGCAGAGCAGGTAGACGGCCAGCACGTTaGCCTGCAGTACCTGCAGCAGCGCCAGCCACGCAGTCAGGCAGT +
Preference number: 1 (lower is better)
Translates to: AARRVPGRAGRRPAR*PAVPAAAPATQSGS
Trigger: ACTGCCTGACTGCGTGGCTGGCGCTGCTGCAGGTACTGCAGGGCAACGTGCTGGCCGTCTACCTGCTCTGCCTGGCACTCTGCGAGCTGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR CCA 90 bp GGCAGGCTGCTGATGAAGAGGCCCCACTGCCTGCCACATGCTCTCTaGGCTCCCGGAAGCCTGGAGGTGTCGCTCCTCCCCTTGGCATGC +
Preference number: 1 (lower is better)
Translates to: GRLLMKRPHCLPHAL*APGSLEVSLLPLAC
Trigger: GCATGCCAAGGGGAGGAGCGACACCTCCAGGCTTCCGGGAGCCCAGAGAGCATGTGGCAGGCAGTGGGGCCTCTTCATCAGCAGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR GCA 90 bp CCCCATGCAGGTGCTGCGTCTGCCCGGCTCTGTGCTCTGAGTGCATaGGATGTGCCCGAGGTGTCGGGGCAGGGAGGAGGATTGATCTCG +
Preference number: 1 (lower is better)
Translates to: PHAGAASARLCALSA*DVPEVSGQGGGLIS
Trigger: CGAGATCAATCCTCCTCCCTGCCCCGACACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCAGCACCTGCATGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR GCA 90 bp GGCTCCCCATGCAGGTGCTGCGTCTGCCCGGCTCTGTGCTCTGAGTaGATGCGATGTGCCCGAGGTGTCGGGGCAGGGAGGAGGATTGAT +
Preference number: 1 (lower is better)
Translates to: GSPCRCCVCPALCSE*MRCARGVGAGRRID
Trigger: ATCAATCCTCCTCCCTGCCCCGACACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCAGCACCTGCATGGGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR CCA 90 bp TGTTGCAGGTCTTGGCGGAGAGGCCCAGGGAGGCCCACGGGGCAGTaGTGGTCACTGGGGTGGCGTTTCCTCAAACACAGCTCTCCGAGG +
Preference number: 1 (lower is better)
Translates to: CCRSWRRGPGRPTGQ*WSLGWRFLKHSSPR
Trigger: CCTCGGAGAGCTGTGTTTGAGGAAACGCCACCCCAGTGACCACCACTGCCCCGTGGGCCTCCCTGGGCCTCTCCGCCAAGACCTGCAACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR TCA 90 bp CTGGGCGCTGCCACAGTGCTGGGTGACCTCCAGCATGGTGCTCACTaGCATTCTGAGGCAGGAGCCCAGAGGGCCCACAATGCACCACCG +
Preference number: 1 (lower is better)
Translates to: LGAATVLGDLQHGAH*HSEAGAQRAHNAPP
Trigger: CGGTGGTGCATTGTGGGCCCTCTGGGCTCCTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCACTGTGGCAGCGCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR GCA 90 bp GGCAAGGCCTTTGCGGCAGACCCAGATCTGACTCAGCCCCGAGGGTaGAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCAACTGCTG +
Preference number: 1 (lower is better)
Translates to: GKAFAADPDLTQPRG*RELAFSARQAGQLL
Trigger: CAGCAGTTGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTCAGATCTGGGTCTGCCGCAAAGGCCTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR GCA 90 bp AAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTaGCAGCAGGCGTGCTACCTGCCCACAGCCAAGGGAGCCAGCCAG +
Preference number: 1 (lower is better)
Translates to: KVIATDANRAATRYL*QQACYLPTAKGASQ
Trigger: CTGGCTGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR CCA 90 bp TGTGTCACACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACATTTaGGGCTCCCCGTTGAGGACGCCTGGGCTGCGCTCTGGGAGCCAG +
Preference number: 1 (lower is better)
Translates to: CVTPVLPTVVLGVDI*GSPLRTPGLRSGSQ
Trigger: CTGGCTCCCAGAGCGCAGCCCAGGCGTCCTCAACGGGGAGCCCCAAATGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR TCA 90 bp AGGCCAGCAGGCCTAGGGTCCAGCGGTGCTGGTTGCGGATATAGATaGCCCAGAGTGGCAGCGTGCCTGTGTACAGCAGCTCGCAGAGTG +
Preference number: 1 (lower is better)
Translates to: RPAGLGSSGAGCGYR*PRVAACLCTAARRV
Trigger: CACTCTGCGAGCTGCTGTACACAGGCACGCTGCCACTCTGGGTCATCTATATCCGCAACCAGCACCGCTGGACCCTAGGCCTGCTGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR GCA 90 bp CCCCCAGCGTGCACACCGCGCTGTACACCACGACCAGGACTATCCTaGTCTCTTCGAAGGACACGTTGTTGCAGGTCTTGGCGGAGAGGC +
Preference number: 1 (lower is better)
Translates to: PPACTPRCTPRPGLS*SLRRTRCCRSWRRG
Trigger: GCCTCTCCGCCAAGACCTGCAACAACGTGTCCTTCGAAGAGAGCAGGATAGTCCTGGTCGTGGTGTACAGCGCGGTGTGCACGCTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR CCA 90 bp TCTGCAAGGGCCACGGGCGACTGCAGCTCCTCGGTGTCCCTGCTGTaGGTGAGCCTGGTGACGTCTGTCTTCATGGACCACTCTTTCCAC +
Preference number: 1 (lower is better)
Translates to: SARATGDCSSSVSLL*VSLVTSVFMDHSFH
Trigger: GTGGAAAGAGTGGTCCATGAAGACAGACGTCACCAGGCTCACCCACAGCAGGGACACCGAGGAGCTGCAGTCGCCCGTGGCCCTTGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR GCA 90 bp GGGGCGAAGCAGACTAGGAAGATGACAACCACCGCGATGGCCGAGTaGTTCACCTTGGCCTTCTGGGCAGCGCTTAAGCCCATGCTCTGC +
Preference number: 1 (lower is better)
Translates to: GAKQTRKMTTTAMAE*FTLAFWAALKPMLC
Trigger: GCAGAGCATGGGCTTAAGCGCTGCCCAGAAGGCCAAGGTGAAGCACTCGGCCATCGCGGTGGTTGTCATCTTCCTAGTCTGCTTCGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR GCA 90 bp GAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATaGTCCGCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCC +
Preference number: 1 (lower is better)
Translates to: EGPQCTTASRQRLQK*SANKVIATDANRAA
Trigger: GGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR CCA 90 bp CCCTTGGCATGCAGCCACCTTCCATGTGGGAAAGCCTGGGGCCAGTaGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTG +
Preference number: 1 (lower is better)
Translates to: PLACSHLPCGKAWGQ*SRREWLQEREIGSL
Trigger: CAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGCCCCAGGCTTTCCCACATGGAAGGTGGCTGCATGCCAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR GCA 90 bp GGAGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTaGAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACA +
Preference number: 1 (lower is better)
Translates to: GAQRAHNAPPHPGNA*RNAPQIKSSPLMRT
Trigger: TGTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR CCA 90 bp AGCCTGGTGACGTCTGTCTTCATGGACCACTCTTTCCACCCCTTATaGATTCTGGACACTTCTTGGCGGGAATGGTCCGTGGCCAGCACG +
Preference number: 1 (lower is better)
Translates to: SLVTSVFMDHSFHPL*ILDTSWREWSVAST
Trigger: CGTGCTGGCCACGGACCATTCCCGCCAAGAAGTGTCCAGAATCCATAAGGGGTGGAAAGAGTGGTCCATGAAGACAGACGTCACCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR TCA 90 bp ACATGGCGTTCCTGTCTCCTCTGTAGTAGGAAAAGGCAGCGGCTTTaGCGAGGAGAACCAGGTGGTACGGGGCGAAGCAGACTAGGAAGA +
Preference number: 1 (lower is better)
Translates to: TWRSCLLCSRKRQRL*RGEPGGTGRSRLGR
Trigger: TCTTCCTAGTCTGCTTCGCCCCGTACCACCTGGTTCTCCTCGTCAAAGCCGCTGCCTTTTCCTACTACAGAGGAGACAGGAACGCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR GCA 90 bp GAGTGCTTCACCTTGGCCTTCTGGGCAGCGCTTAAGCCCATGCTCTaGTTGATGCTCCTGAAAATCCGGTGGTTGGTGAAGGCGATGATG +
Preference number: 1 (lower is better)
Translates to: ECFTLAFWAALKPML*LMLLKIRWLVKAMM
Trigger: CATCATCGCCTTCACCAACCACCGGATTTTCAGGAGCATCAAGCAGAGCATGGGCTTAAGCGCTGCCCAGAAGGCCAAGGTGAAGCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR CAA 90 bp TTGCCCTGCAGTACCTGCAGCAGCGCCAGCCACGCAGTCAGGCAGTaGGCCGGCACCCCCAGCGTGCACACCGCGCTGTACACCACGACC +
Preference number: 2 (lower is better)
Translates to: LPCSTCSSASHAVRQ*AGTPSVHTALYTTT
Trigger: GGTCGTGGTGTACAGCGCGGTGTGCACGCTGGGGGTGCCGGCCAACTGCCTGACTGCGTGGCTGGCGCTGCTGCAGGTACTGCAGGGCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR CCA 90 bp CCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGGGCTCCCGGAAGCCTaGAGGTGTCGCTCCTCCCCT +
Preference number: 2 (lower is better)
Translates to: PLEVVGCPMPSWALPQCWGLPEA*RCRSSP
Trigger: AGGGGAGGAGCGACACCTCCAGGCTTCCGGGAGCCC...CCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR CCA 90 bp TGCGTCTGCCCGGCTCTGTGCTCTGAGTGCATGCGATGTGCCCGAGGTGTCGGGGCCTGGGCTGCGCTCTaGGAGCCAGCAGCTGGCCAC +
Preference number: 2 (lower is better)
Translates to: CVCPALCSECMRCARGVGAWAAL*EPAAGH
Trigger: GTGGCCAGCTGCTGGCTCCCAGAGCGCAGCCCAGGC...CCCGACACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR CCA 90 bp GACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCACCTGCGCGGCCTCCCTaGAAGCCCCTGTGCTGTGCC +
Preference number: 2 (lower is better)
Translates to: DSAPRVQGAGFLRQTSRPPARPP*KPLCCA
Trigger: GGCACAGCACAGGGGCTTCCAGGGAGGCCGCGCAGG...TGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR GCA 90 bp GCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTTGGAGGTGGTAGGCTaGCCTATGCCCTCCTGGGCG +
Preference number: 2 (lower is better)
Translates to: APLEVVGCPMPSWALPQCLEVVG*PMPSWA
Trigger: CGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAA...GCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR GCA 90 bp GGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACGCCAGCACGTTGCCCTaGAGTACCTGCAGCAGCGCC +
Preference number: 2 (lower is better)
Translates to: GGGRLPYALLGAATVLGDASTLP*STCSSA
Trigger: GGCGCTGCTGCAGGTACTGCAGGGCAACGTGCTGGC...GTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR CCA 90 bp GGCAGGAGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGGGGCTCCCGGAAGCCTaGAGGTGTCGCTCCTCCCCT +
Preference number: 2 (lower is better)
Translates to: GRSPEGPQCTTASRQRLQGLPEA*RCRSSP
Trigger: AGGGGAGGAGCGACACCTCCAGGCTTCCGGGAGCCC...CTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCTCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR CCA 90 bp GACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCACCCGTTGAGGACGCCTaGGCTGCGCTCTGGGAGCCA +
Preference number: 2 (lower is better)
Translates to: DSAPRVQGAGFLRQTSRPPVEDA*AALWEP
Trigger: TGGCTCCCAGAGCGCAGCCCAGGCGTCCTCAACGGG...TGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR TCA 90 bp GGTGCTGCGTCTGCCCGGCTCTGTGCTCTGAGTGCATGCGATGTGCCCGAGGTGCGGCAGACCCAGATCTaGCTCAGCCCCGAGGGTGCA +
Preference number: 2 (lower is better)
Translates to: GAASARLCALSACDVPEVRQTQI*LSPEGA
Trigger: TGCACCCTCGGGGCTGAGTCAGATCTGGGTCTGCCG...CACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCAGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR TCA 90 bp CCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCAACTGCTGAGATGCAGGCGGAGATaGGGATGGCGGTCCTCCGGC +
Preference number: 2 (lower is better)
Translates to: PRGCRELAFSARQAGQLLRCRRR*GWRSSG
Trigger: GCCGGAGGACCGCCATCCTCATCTCCGCCTGCATCT...CAGCAGTTGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR GCA 90 bp GGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCCAGAGAGGCCCCACTGCCTaGCACATGCTCTCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: GRLPYALLGAATVLGDLQRGPTA*HMLSGL
Trigger: GAGCCCAGAGAGCATGTGGCAGGCAGTGGGGCCTCT...CTGGAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR GCA 90 bp GGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACAGAGGCCCCACTGCCTaGCACATGCTCTCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: GGGRLPYALLGAATVLGDRGPTA*HMLSGL
Trigger: GAGCCCAGAGAGCATGTGGCAGGCAGTGGGGCCTCT...GTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR GCA 90 bp GTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCCAGCAGAGGCCCCACTGCCTaGCACATGCTCTCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: VGCPMPSWALPQCWVTSSRGPTA*HMLSGL
Trigger: GAGCCCAGAGAGCATGTGGCAGGCAGTGGGGCCTCT...GCTGGAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR GCA 90 bp GTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCCAGCAGCAGGCGTGCTACCTaGCCACAGCCAAGGGAGCCA +
Preference number: 2 (lower is better)
Translates to: VGCPMPSWALPQCWVTSSSRRAT*PQPREP
Trigger: TGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCT...GCTGGAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR GCA 90 bp CAGATGAGGGCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCCACCAGGTACCTCTaGCAGCAGGCGTGCTACCTG +
Preference number: 2 (lower is better)
Translates to: QMRAPAPLEVVGCPMPSWATRYL*QQACYL
Trigger: CAGGTAGCACGCCTGCTGGCAGAGGTACCTGGTGGC...CCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCCCTCATCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR GCA 90 bp GGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCCAGTTGCCCTGCAGTACCTaGAGCAGCGCCAGCCACGCA +
Preference number: 2 (lower is better)
Translates to: GRLPYALLGAATVLGDLQLPCST*SSASHA
Trigger: TGCGTGGCTGGCGCTGCTGCAGGTACTGCAGGGCAA...CTGGAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR CCA 90 bp GGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCCTTCCAGAGGGGACATaGGCACTGTGGCTGGTGGGC +
Preference number: 2 (lower is better)
Translates to: GGRLPYALLGAATVLGDLLPEGT*ALWLVG
Trigger: GCCCACCAGCCACAGTGCCCATGTCCCCTCTGGAAG...GAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR CCA 90 bp GGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTGCCACATGCTCTCTaGGCTCCCGGAAGCCTGGAG +
Preference number: 2 (lower is better)
Translates to: GGGRLPYALLGAATVLGDLPHAL*APGSLE
Trigger: CTCCAGGCTTCCGGGAGCCCAGAGAGCATGTGGCAG...GTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR GCA 90 bp TGCGTCTGCCCGGCTCTGTGCTCTGAGTGCATGCGATGTGCCCGAGGTGTCGGGCTCTGCCAGCAGGCGTaGTACCTGCCCACAGCCAAG +
Preference number: 2 (lower is better)
Translates to: CVCPALCSECMRCARGVGLCQQA*YLPTAK
Trigger: CTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAG...CCCGACACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR GCA 90 bp CCAACCCCAGATGAGGGCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCCAGAGGGCCCACAATaGACCACCGCATCCAGGCAA +
Preference number: 2 (lower is better)
Translates to: PTPDEGACPLGGGRLPYAPEGPQ*TTASRQ
Trigger: TTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGG...GGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCCCTCATCTGGGGTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR CCA 90 bp CCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGCAGGAACCACATTGCTaGCCCCAGGACCCCCAACCT +
Preference number: 2 (lower is better)
Translates to: PLEVVGCPMPSWALPQCWQEPHC*PQDPQP
Trigger: AGGTTGGGGGTCCTGGGGCCAGCAATGTGGTTCCTG...CCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR CCA 90 bp ACCAGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCAAGGGAGCCAGCCTGCCACATGCTCTCTaGGCTCCCGGAAGCCTGGAG +
Preference number: 2 (lower is better)
Translates to: TRYLCQQACYLPTAKGASLPHAL*APGSLE
Trigger: CTCCAGGCTTCCGGGAGCCCAGAGAGCATGTGGCAG...GCTGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR CCA 90 bp CCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCAACTGCTGGCGCTGCCACAGTGCTaGGTGACCTCCAGCATGGTG +
Preference number: 2 (lower is better)
Translates to: PRGCRELAFSARQAGQLLALPQC*VTSSMV
Trigger: CACCATGCTGGAGGTCACCCAGCACTGTGGCAGCGC...CAGCAGTTGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR CCA 90 bp AGGCAGGCTGCTGATGAAGAGGCCCCACTGCCTGCCACATGCTCTCTGGGCTCCTGCCCTATGCCCTCCTaGGCGCTGCCACAGTGCTGG +
Preference number: 2 (lower is better)
Translates to: RQAADEEAPLPATCSLGSCPMPS*ALPQCW
Trigger: CCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCA...GGAGCCCAGAGAGCATGTGGCAGGCAGTGGGGCCTCTTCATCAGCAGCCTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR CCA 90 bp GCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCGGAGGATGGCTGTTTTaGCTGGGTGTGGTGGTGCAC +
Preference number: 2 (lower is better)
Translates to: APLEVVGCPMPSWALPQCGGWLF*LGVVVH
Trigger: GTGCACCACCACACCCAGCCAAAACAGCCATCCTCC...GCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR GCA 90 bp GGTGCTGCGTCTGCCCGGCTCTGTGCTCTGAGTGCATGCGATGTGCCCGAGGTGCTCCTCCCCTTGGCATaGAGCCACCTTCCATGTGGG +
Preference number: 2 (lower is better)
Translates to: GAASARLCALSACDVPEVLLPLA*SHLPCG
Trigger: CCCACATGGAAGGTGGCTGCATGCCAAGGGGAGGAG...CACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCAGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR GCA 90 bp AGGCAGGCTGCTGATGAAGAGGCCCCACTGCCTGCCACATGCTCTCTGGGCTCCAGAGGCCCCACTGCCTaGCACATGCTCTCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: RQAADEEAPLPATCSLGSRGPTA*HMLSGL
Trigger: GAGCCCAGAGAGCATGTGGCAGGCAGTGGGGCCTCT...GGAGCCCAGAGAGCATGTGGCAGGCAGTGGGGCCTCTTCATCAGCAGCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR GCA 90 bp GGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACATGAAGAGGCCCCACTaGCTGCCACATGCTCTCTGG +
Preference number: 2 (lower is better)
Translates to: GGGRLPYALLGAATVLGDMKRPH*LPHALW
Trigger: CCAGAGAGCATGTGGCAGGCAGTGGGGCCTCTTCAT...GTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR GCA 90 bp TCTGACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGTGGGCGCTGCCACAGTaGTGGGTGACCTCCAGCATG +
Preference number: 2 (lower is better)
Translates to: SDSAPRVQGAGFLRQTSRWALPQ*WVTSSM
Trigger: CATGCTGGAGGTCACCCAGCACTGTGGCAGCGCCCA...CCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR GCA 90 bp CCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCAACTGCTGACTCCTGGCACCCCTTaGCTCTGCTGTGGCTGTGTC +
Preference number: 2 (lower is better)
Translates to: PRGCRELAFSARQAGQLLTPGTP*LCCGCV
Trigger: GACACAGCCACAGCAGAGGCAAGGGGTGCCAGGAGT...CAGCAGTTGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR GCA 90 bp GCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTCTAGGCAAGGCCTTTaGGGCAGACCCAGATCTGAC +
Preference number: 2 (lower is better)
Translates to: APLEVVGCPMPSWALPQCSRQGL*GRPRSD
Trigger: GTCAGATCTGGGTCTGCCGCAAAGGCCTTGCCTAGA...GCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR GCA 90 bp GGAAACCAGGGCATCAGTGTGACCTGGTCTAGGCAAGGCCTTTGCGGCAGACCCGGCTCCCCATGCAGGTaGTGCGTCTGCCCGGCTCTG +
Preference number: 2 (lower is better)
Translates to: GNQGISVTWSRQGLCGRPGSPCR*CVCPAL
Trigger: CAGAGCCGGGCAGACGCAGCACCTGCATGGGGAGCC...GGGTCTGCCGCAAAGGCCTTGCCTAGACCAGGTCACACTGATGCCCTGGTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR GCA 90 bp GACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCACAGCAGCTCGCAGAGTaGCAGGCAGAGCAGGTAGAC +
Preference number: 2 (lower is better)
Translates to: DSAPRVQGAGFLRQTSRPQQLAE*QAEQVD
Trigger: GTCTACCTGCTCTGCCTGGCACTCTGCGAGCTGCTG...TGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR GCA 90 bp GGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCCAGAGCGGTCGCAGGAGATaGAGCACAGGAAGAGGATGC +
Preference number: 2 (lower is better)
Translates to: GRLPYALLGAATVLGDLQSGRRR*STGRGC
Trigger: GCATCCTCTTCCTGTGCTGCATCTCCTGCGACCGCT...CTGGAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR CCA 90 bp ACCAGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCAAGGGAGCCAGCCAGGAACCACATTGCTaGCCCCAGGACCCCCAACCT +
Preference number: 2 (lower is better)
Translates to: TRYLCQQACYLPTAKGASQEPHC*PQDPQP
Trigger: AGGTTGGGGGTCCTGGGGCCAGCAATGTGGTTCCTG...GCTGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR CCA 90 bp CCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCAACTGCTGCAGGAACCACATTGCTaGCCCCAGGACCCCCAACCT +
Preference number: 2 (lower is better)
Translates to: PRGCRELAFSARQAGQLLQEPHC*PQDPQP
Trigger: AGGTTGGGGGTCCTGGGGCCAGCAATGTGGTTCCTG...CAGCAGTTGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR CCA 90 bp GCACGTTGCCCTGCAGTACCTGCAGCAGCGCCAGCCACGCAGTCAGGCAGTTGGCAGGAACCACATTGCTaGCCCCAGGACCCCCAACCT +
Preference number: 2 (lower is better)
Translates to: ARCPAVPAAAPATQSGSWQEPHC*PQDPQP
Trigger: AGGTTGGGGGTCCTGGGGCCAGCAATGTGGTTCCTG...CCAACTGCCTGACTGCGTGGCTGGCGCTGCTGCAGGTACTGCAGGGCAACGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR CCA 90 bp AGTGCATGCGATGTGCCCGAGGTGTCGGGGCAGGGAGGAGGATTGATCTCGATGGCCGCTGGGGACTCCTaGCACCCCTTGCCTCTGCTG +
Preference number: 2 (lower is better)
Translates to: SACDVPEVSGQGGGLISMAAGDS*HPLPLL
Trigger: CAGCAGAGGCAAGGGGTGCCAGGAGTCCCCAGCGGC...CATCGAGATCAATCCTCCTCCCTGCCCCGACACCTCGGGCACATCGCATGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR CCA 90 bp GTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCCAGCGGCAGTGGTGGTCACTaGGGTGGCGTTTCCTCAAAC +
Preference number: 2 (lower is better)
Translates to: VGCPMPSWALPQCWVTSSGSGGH*GGVSSN
Trigger: GTTTGAGGAAACGCCACCCCAGTGACCACCACTGCC...GCTGGAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR CCA 90 bp AGGCAGGAGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCACGTTGTTGCAGGTCTTaGCGGAGAGGCCCAGGGAGG +
Preference number: 2 (lower is better)
Translates to: RQEPRGPTMHHRIQATLARCCRS*RRGPGR
Trigger: CCTCCCTGGGCCTCTCCGCCAAGACCTGCAACAACG...TGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCTCCTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR CAA 90 bp CTGTGTCACACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACATTaGGGGCTCCCCGTTGAGGACGCCTGGGCTGCGCTCTGGGAGCCA +
Preference number: 2 (lower is better)
Translates to: LCHTCPANCCSGRGH*GLPVEDAWAALWEP
Trigger: TGGCTCCCAGAGCGCAGCCCAGGCGTCCTCAACGGGGAGCCCCAAATGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR GCA 90 bp AGGCAGGCTGCTGATGAAGAGGCCCCACTGCCTGCCACATGCTCTCTGGGCTCCCTCCTCCCCTTGGCATaGAGCCACCTTCCATGTGGG +
Preference number: 2 (lower is better)
Translates to: RQAADEEAPLPATCSLGSLLPLA*SHLPCG
Trigger: CCCACATGGAAGGTGGCTGCATGCCAAGGGGAGGAG...GGAGCCCAGAGAGCATGTGGCAGGCAGTGGGGCCTCTTCATCAGCAGCCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR GCA 90 bp GGTGCTGCGTCTGCCCGGCTCTGTGCTCTGAGTGCATGCGATGTGCCCGAGGTGATGAAGAGGCCCCACTaGCTGCCACATGCTCTCTGG +
Preference number: 2 (lower is better)
Translates to: GAASARLCALSACDVPEVMKRPH*LPHALW
Trigger: CCAGAGAGCATGTGGCAGGCAGTGGGGCCTCTTCAT...CACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCAGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR GCA 90 bp GGCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCCATCCAGGCAACGCTTaGAGAAATGCTCCGCAAATA +
Preference number: 2 (lower is better)
Translates to: GACPLGGGRLPYALLGAAHPGNA*RNAPQI
Trigger: TATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATG...GGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR GCA 90 bp TCTGACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGACTCCTGGCACCCCTTaGCTCTGCTGTGGCTGTGTC +
Preference number: 2 (lower is better)
Translates to: SDSAPRVQGAGFLRQTSRTPGTP*LCCGCV
Trigger: GACACAGCCACAGCAGAGGCAAGGGGTGCCAGGAGT...CCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR GCA 90 bp GGAAACCAGGGCATCAGTGTGACCTGGTCTAGGCAAGGCCTTTGCGGCAGACCCGCATCTCCCCGAGGATaGCGCTGGGGACTCCTGGCA +
Preference number: 2 (lower is better)
Translates to: GNQGISVTWSRQGLCGRPASPRG*RWGLLA
Trigger: TGCCAGGAGTCCCCAGCGGCATCCTCGGGGAGATGC...GGGTCTGCCGCAAAGGCCTTGCCTAGACCAGGTCACACTGATGCCCTGGTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR CCA 90 bp TCTGACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCAGCCACCTTCCATGTaGGAAAGCCTGGGGCCAGTG +
Preference number: 2 (lower is better)
Translates to: SDSAPRVQGAGFLRQTSRQPPSM*ESLGPV
Trigger: CACTGGCCCCAGGCTTTCCCACATGGAAGGTGGCTG...CCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR CCA 90 bp AGGCAGGAGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCACAGCCACCTTCCATGTaGGAAAGCCTGGGGCCAGTG +
Preference number: 2 (lower is better)
Translates to: RQEPRGPTMHHRIQATLAQPPSM*ESLGPV
Trigger: CACTGGCCCCAGGCTTTCCCACATGGAAGGTGGCTG...TGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCTCCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR CCA 90 bp GACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCACTGTTGTTCTGGGCGTaGACATTTGGGGCTCCCCGT +
Preference number: 2 (lower is better)
Translates to: DSAPRVQGAGFLRQTSRPLLFWA*TFGAPR
Trigger: ACGGGGAGCCCCAAATGTCCACGCCCAGAACAACAG...TGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR CCA 90 bp GACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCAGGAGGATGGCTGTTTTaGCTGGGTGTGGTGGTGCAC +
Preference number: 2 (lower is better)
Translates to: DSAPRVQGAGFLRQTSRPGGWLF*LGVVVH
Trigger: GTGCACCACCACACCCAGCCAAAACAGCCATCCTCC...TGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR CCA 90 bp GGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCCAGTGGTGGTCACTGGGGTaGCGTTTCCTCAAACACAGC +
Preference number: 2 (lower is better)
Translates to: GRLPYALLGAATVLGDLQWWSLG*RFLKHS
Trigger: GCTGTGTTTGAGGAAACGCCACCCCAGTGACCACCA...CTGGAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR CCA 90 bp AAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCCAGCAGAGGCCCACGGGGCAGTaGTGGTCACTGGGGTGGCGT +
Preference number: 2 (lower is better)
Translates to: KVIATDANRAATRYLCQQRPTGQ*WSLGWR
Trigger: ACGCCACCCCAGTGACCACCACTGCCCCGTGGGCCT...CTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR CCA 90 bp AAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCCAGCAGACGCAGTCAGGCAGTTaGCCGGCACCCCCAGCGTGC +
Preference number: 2 (lower is better)
Translates to: KVIATDANRAATRYLCQQTQSGS*PAPPAC
Trigger: GCACGCTGGGGGTGCCGGCCAACTGCCTGACTGCGT...CTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR CCA 90 bp TGCGTCTGCCCGGCTCTGTGCTCTGAGTGCATGCGATGTGCCCGAGGTGTCGGGCCGAGTGCTTCACCTTaGCCTTCTGGGCAGCGCTTA +
Preference number: 2 (lower is better)
Translates to: CVCPALCSECMRCARGVGPSASP*PSGQRL
Trigger: TAAGCGCTGCCCAGAAGGCCAAGGTGAAGCACTCGG...CCCGACACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR CCA 90 bp TGCGTCTGCCCGGCTCTGTGCTCTGAGTGCATGCGATGTGCCCGAGGTGTCGGGCCTCCAAGCCGCACATaGCGTTCCTGTCTCCTCTGT +
Preference number: 2 (lower is better)
Translates to: CVCPALCSECMRCARGVGPPSRT*RSCLLC
Trigger: ACAGAGGAGACAGGAACGCCATGTGCGGCTTGGAGG...CCCGACACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR CAA 90 bp CTGTACACCACGACCAGGACTATCCTGCTCTCTTCGAAGGACACGTaGTTGCAGGTCTTGGCGGAGAGGCCCAGGGAGGCCCACGGGGCA +
Preference number: 2 (lower is better)
Translates to: LYTTTRTILLSSKDT*LQVLAERPREAHGA
Trigger: TGCCCCGTGGGCCTCCCTGGGCCTCTCCGCCAAGACCTGCAACAACGTGTCCTTCGAAGAGAGCAGGATAGTCCTGGTCGTGGTGTACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR TCA 90 bp TCTGCTGTGGCTGTGTCACACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACATTTGGGGCTCCCCGTTaGGGACGCCTGGGCTGCGCT +
Preference number: 2 (lower is better)
Translates to: SAVAVSHLSCQLLFWAWTFGAPR*GRLGCA
Trigger: AGCGCAGCCCAGGCGTCCTCAACGGGGAGCCCCAAA...TGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACAGCCACAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR GCA 90 bp AAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCCAGCAGCCAGGACCCCCAACCTaGCATCCCCCTGCCACACAG +
Preference number: 2 (lower is better)
Translates to: KVIATDANRAATRYLCQQPGPPT*HPPATQ
Trigger: CTGTGTGGCAGGGGGATGGCAGGTTGGGGGTCCTGG...CTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR GCA 90 bp GGAAACCAGGGCATCAGTGTGACCTGGTCTAGGCAAGGCCTTTGCGGCAGACCCCTCTGCCAGCAGGCGTaGTACCTGCCCACAGCCAAG +
Preference number: 2 (lower is better)
Translates to: GNQGISVTWSRQGLCGRPLCQQA*YLPTAK
Trigger: CTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAG...GGGTCTGCCGCAAAGGCCTTGCCTAGACCAGGTCACACTGATGCCCTGGTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR GCA 90 bp AAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCCAGCAGTCCCCATGCAGGTGCTaGGTCTGCCCGGCTCTGTGC +
Preference number: 2 (lower is better)
Translates to: KVIATDANRAATRYLCQQSPCRC*VCPALC
Trigger: GCACAGAGCCGGGCAGACGCAGCACCTGCATGGGGA...CTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR GCA 90 bp TCTGTAGTAGGAAAAGGCAGCGGCTTTGACGAGGAGAACCAGGTGGTACGGGGCCCGGCACCCCCAGCGTaGACACCGCGCTGTACACCA +
Preference number: 2 (lower is better)
Translates to: SVVGKGSGFDEENQVVRGPAPPA*TPRCTP
Trigger: TGGTGTACAGCGCGGTGTGCACGCTGGGGGTGCCGG...GCCCCGTACCACCTGGTTCTCCTCGTCAAAGCCGCTGCCTTTTCCTACTACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR CCA 90 bp AAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCCAGCAGGCTTCCAGAGGGGACATaGGCACTGTGGCTGGTGGGC +
Preference number: 2 (lower is better)
Translates to: KSSPLMRTGQPPGTSASRLPEGT*ALWLVG
Trigger: GCCCACCAGCCACAGTGCCCATGTCCCCTCTGGAAG...CCTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR CCA 90 bp GCTGTGGGTGAGCCTGGTGACGTCTGTCTTCATGGACCACTCTTTCCACCCCTTCTGGGAGCCAGCAGCTaGCCACCCTGCCCCACGGTT +
Preference number: 2 (lower is better)
Translates to: AVGEPGDVCLHGPLFPPLLGASS*PPCPTV
Trigger: AACCGTGGGGCAGGGTGGCCAGCTGCTGGCTCCCAG...AAGGGGTGGAAAGAGTGGTCCATGAAGACAGACGTCACCAGGCTCACCCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR CCA 90 bp AGTGCATGCGATGTGCCCGAGGTGTCGGGGCAGGGAGGAGGATTGATCTCGATGCTGGGCGTGGACATTTaGGGCTCCCCGTTGAGGACG +
Preference number: 2 (lower is better)
Translates to: SACDVPEVSGQGGGLISMLGVDI*GSPLRT
Trigger: CGTCCTCAACGGGGAGCCCCAAATGTCCACGCCCAG...CATCGAGATCAATCCTCCTCCCTGCCCCGACACCTCGGGCACATCGCATGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR CCA 90 bp GATGACTCTCAAGGGGAGGATGGCTGTTTTGGCTGGGTGTGGTGGTGCACACCTGCCGCTGGGGACTCCTaGCACCCCTTGCCTCTGCTG +
Preference number: 2 (lower is better)
Translates to: DDSQGEDGCFGWVWWCTPAAGDS*HPLPLL
Trigger: CAGCAGAGGCAAGGGGTGCCAGGAGTCCCCAGCGGC...AGGTGTGCACCACCACACCCAGCCAAAACAGCCATCCTCCCCTTGAGAGTCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR CCA 90 bp GACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCACTCTCAAGGGGAGGATaGCTGTTTTGGCTGGGTGTG +
Preference number: 2 (lower is better)
Translates to: DSAPRVQGAGFLRQTSRPLSRGG*LFWLGV
Trigger: CACACCCAGCCAAAACAGCCATCCTCCCCTTGAGAG...TGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR TCA 90 bp GATGACTCTCAAGGGGAGGATGGCTGTTTTGGCTGGGTGTGGTGGTGCACACCTCGGCAGACCCAGATCTaGCTCAGCCCCGAGGGTGCA +
Preference number: 2 (lower is better)
Translates to: DDSQGEDGCFGWVWWCTPRQTQI*LSPEGA
Trigger: TGCACCCTCGGGGCTGAGTCAGATCTGGGTCTGCCG...AGGTGTGCACCACCACACCCAGCCAAAACAGCCATCCTCCCCTTGAGAGTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR GCA 90 bp CTGCCACAGTGCTGGGTGACCTCCAGCATGGTGCTCACTGACATTCTGAGGCAGAGCAGGCGTGCTACCTaGCCACAGCCAAGGGAGCCA +
Preference number: 2 (lower is better)
Translates to: LPQCWVTSSMVLTDILRQSRRAT*PQPREP
Trigger: TGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCT...CTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCACTGTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR GCA 90 bp TGCTGGGTGACCTCCAGCATGGTGCTCACTGACATTCTGAGGCAGGAGCCCAGACTCTGCCAGCAGGCGTaGTACCTGCCCACAGCCAAG +
Preference number: 2 (lower is better)
Translates to: CWVTSSMVLTDILRQEPRLCQQA*YLPTAK
Trigger: CTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAG...TCTGGGCTCCTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR GCA 90 bp GCTGTGTCACACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACATTTGGGGCTCCAGATGAGGGCGCCTaGCCCCTTGGAGGTGGTAGG +
Preference number: 2 (lower is better)
Translates to: AVSHLSCQLLFWAWTFGAPDEGA*PLGGGR
Trigger: CCTACCACCTCCAAGGGGGCAGGCGCCCTCATCTGG...AGCCCCAAATGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR GCA 90 bp AGGCAGGCTGCTGATGAAGAGGCCCCACTGCCTGCCACATGCTCTCTGGGCTCCGTGTCACACCTGTCCTaGCAACTGTTGTTCTGGGCG +
Preference number: 2 (lower is better)
Translates to: RQAADEEAPLPATCSLGSVSHLS*QLLFWA
Trigger: CGCCCAGAACAACAGTTGGCAGGACAGGTGTGACAC...GGAGCCCAGAGAGCATGTGGCAGGCAGTGGGGCCTCTTCATCAGCAGCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR GCA 90 bp GGAAACCAGGGCATCAGTGTGACCTGGTCTAGGCAAGGCCTTTGCGGCAGACCCGGCACCCCTTGCCTCTaGTGTGGCTGTGTCACACCT +
Preference number: 2 (lower is better)
Translates to: GNQGISVTWSRQGLCGRPGTPCL*CGCVTP
Trigger: AGGTGTGACACAGCCACAGCAGAGGCAAGGGGTGCC...GGGTCTGCCGCAAAGGCCTTGCCTAGACCAGGTCACACTGATGCCCTGGTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR GCA 90 bp AAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCCAGCAGTGCAGGTGCTGCGTCTaGCCGGCTCTGTGCTCTGAG +
Preference number: 2 (lower is better)
Translates to: KVIATDANRAATRYLCQQCRCCV*PALCSE
Trigger: CTCAGAGCACAGAGCCGGGCAGACGCAGCACCTGCA...CTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR GCA 90 bp GGAAACCAGGGCATCAGTGTGACCTGGTCTAGGCAAGGCCTTTGCGGCAGACCCAACCTGCCATCCCCCTaGCACACAGTGGGCTCAGCA +
Preference number: 2 (lower is better)
Translates to: GNQGISVTWSRQGLCGRPNLPSP*HTVGSA
Trigger: TGCTGAGCCCACTGTGTGGCAGGGGGATGGCAGGTT...GGGTCTGCCGCAAAGGCCTTGCCTAGACCAGGTCACACTGATGCCCTGGTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR CCA 90 bp AAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCCAGCAGGGGACATGGGCACTGTaGCTGGTGGGCTCAGTGCAC +
Preference number: 2 (lower is better)
Translates to: KVIATDANRAATRYLCQQGTWAL*LVGSVH
Trigger: GTGCACTGAGCCCACCAGCCACAGTGCCCATGTCCC...CTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR CCA 90 bp TGCGTCTGCCCGGCTCTGTGCTCTGAGTGCATGCGATGTGCCCGAGGTGTCGGGTGCCAACTGTTGTTCTaGGCGTGGACATTTGGGGCT +
Preference number: 2 (lower is better)
Translates to: CVCPALCSECMRCARGVGCQLLF*AWTFGA
Trigger: AGCCCCAAATGTCCACGCCCAGAACAACAGTTGGCA...CCCGACACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR CCA 90 bp GGAAACCAGGGCATCAGTGTGACCTGGTCTAGGCAAGGCCTTTGCGGCAGACCCGAGGGTGCAGGGAGCTaGCTTTCTCCGCCAGACAAG +
Preference number: 2 (lower is better)
Translates to: GNQGISVTWSRQGLCGRPEGAGS*LSPPDK
Trigger: CTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTC...GGGTCTGCCGCAAAGGCCTTGCCTAGACCAGGTCACACTGATGCCCTGGTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR CCA 90 bp AGGCAGGCTGCTGATGAAGAGGCCCCACTGCCTGCCACATGCTCTCTGGGCTCCGATGGCTGTTTTGGCTaGGTGTGGTGGTGCACACCT +
Preference number: 2 (lower is better)
Translates to: RQAADEEAPLPATCSLGSDGCFG*VWWCTP
Trigger: AGGTGTGCACCACCACACCCAGCCAAAACAGCCATC...GGAGCCCAGAGAGCATGTGGCAGGCAGTGGGGCCTCTTCATCAGCAGCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR TCA 90 bp GCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGTTTGGGGCTCCCCGTTaGGGACGCCTGGGCTGCGCT +
Preference number: 2 (lower is better)
Translates to: APPHPGNACRNAPQIKSSFGAPR*GRLGCA
Trigger: AGCGCAGCCCAGGCGTCCTCAACGGGGAGCCCCAAA...CGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR TCA 90 bp AGTGCATGCGATGTGCCCGAGGTGTCGGGGCAGGGAGGAGGATTGATCTCGATGAGCAGACTAGGAAGATaGCAACCACCGCGATGGCCG +
Preference number: 2 (lower is better)
Translates to: SACDVPEVSGQGGGLISMSRLGR*QPPRWP
Trigger: CGGCCATCGCGGTGGTTGTCATCTTCCTAGTCTGCT...CATCGAGATCAATCCTCCTCCCTGCCCCGACACCTCGGGCACATCGCATGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR GCA 90 bp TGCTGGGTGACCTCCAGCATGGTGCTCACTGACATTCTGAGGCAGGAGCCCAGAGCACAGGAACCACATTaGTGGCCCCAGGACCCCCAA +
Preference number: 2 (lower is better)
Translates to: CWVTSSMVLTDILRQEPRAQEPH*WPQDPQ
Trigger: TTGGGGGTCCTGGGGCCAGCAATGTGGTTCCTGTGC...TCTGGGCTCCTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR GCA 90 bp AAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCCAGCAGGATGAAGAGGCCCCACTaGCTGCCACATGCTCTCTGG +
Preference number: 2 (lower is better)
Translates to: KSSPLMRTGQPPGTSASRMKRPH*LPHALW
Trigger: CCAGAGAGCATGTGGCAGGCAGTGGGGCCTCTTCAT...CCTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR GCA 90 bp GTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCCAGCCATCCAGGCAACGCTTaGAGAAATGCTCCGCAAATA +
Preference number: 2 (lower is better)
Translates to: VGCPMPSWALPQCWVTSSHPGNA*RNAPQI
Trigger: TATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATG...GCTGGAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR GCA 90 bp GATGACTCTCAAGGGGAGGATGGCTGTTTTGGCTGGGTGTGGTGGTGCACACCTACTCAGCCCCGAGGGTaGAGGGAGCTGGCTTTCTCC +
Preference number: 2 (lower is better)
Translates to: DDSQGEDGCFGWVWWCTPTQPRG*RELAFS
Trigger: GGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGT...AGGTGTGCACCACCACACCCAGCCAAAACAGCCATCCTCCCCTTGAGAGTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR GCA 90 bp GGAAACCAGGGCATCAGTGTGACCTGGTCTAGGCAAGGCCTTTGCGGCAGACCCGCTCTGTGCTCTGAGTaGATGCGATGTGCCCGAGGT +
Preference number: 2 (lower is better)
Translates to: GNQGISVTWSRQGLCGRPALCSE*MRCARG
Trigger: ACCTCGGGCACATCGCATGCACTCAGAGCACAGAGC...GGGTCTGCCGCAAAGGCCTTGCCTAGACCAGGTCACACTGATGCCCTGGTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR GCA 90 bp GCTGTGTCACACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACATTTGGGGCTTGCAGGTGCTGCGTCTaGCCGGCTCTGTGCTCTGAG +
Preference number: 2 (lower is better)
Translates to: AVSHLSCQLLFWAWTFGACRCCV*PALCSE
Trigger: CTCAGAGCACAGAGCCGGGCAGACGCAGCACCTGCA...AGCCCCAAATGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR GCA 90 bp GCTGTGGGTGAGCCTGGTGACGTCTGTCTTCATGGACCACTCTTTCCACCCCTTCCCAGAGTGGCAGCGTaGCTGTGTACAGCAGCTCGC +
Preference number: 2 (lower is better)
Translates to: AVGEPGDVCLHGPLFPPLPRVAA*LCTAAR
Trigger: GCGAGCTGCTGTACACAGGCACGCTGCCACTCTGGG...AAGGGGTGGAAAGAGTGGTCCATGAAGACAGACGTCACCAGGCTCACCCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR CCA 90 bp TCTGCTGTGGCTGTGTCACACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACACTTCCAGAGGGGACATaGGCACTGTGGCTGGTGGGC +
Preference number: 2 (lower is better)
Translates to: SAVAVSHLSCQLLFWAWTLPEGT*ALWLVG
Trigger: GCCCACCAGCCACAGTGCCCATGTCCCCTCTGGAAG...TGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACAGCCACAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR CCA 90 bp AAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCCAGCAGCAGCCACCTTCCATGTaGGAAAGCCTGGGGCCAGTG +
Preference number: 2 (lower is better)
Translates to: KVIATDANRAATRYLCQQQPPSM*ESLGPV
Trigger: CACTGGCCCCAGGCTTTCCCACATGGAAGGTGGCTG...CTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR CCA 90 bp GCTGTGTCACACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACATTTGGGGCTCTGCCACATGCTCTCTaGGCTCCCGGAAGCCTGGAG +
Preference number: 2 (lower is better)
Translates to: AVSHLSCQLLFWAWTFGALPHAL*APGSLE
Trigger: CTCCAGGCTTCCGGGAGCCCAGAGAGCATGTGGCAG...AGCCCCAAATGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR CCA 90 bp AGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGCCTGGGCTGCGCTCTaGGAGCCAGCAGCTGGCCAC +
Preference number: 2 (lower is better)
Translates to: RNAPQIKSSPLMRTGQPPAWAAL*EPAAGH
Trigger: GTGGCCAGCTGCTGGCTCCCAGAGCGCAGCCCAGGC...TGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR CCA 90 bp TCTTTCCACCCCTTATGGATTCTGGACACTTCTTGGCGGGAATGGTCCGTGGCCCCCACGGGGCAGTGGTaGTCACTGGGGTGGCGTTTC +
Preference number: 2 (lower is better)
Translates to: SFHPLWILDTSWREWSVAPTGQW*SLGWRF
Trigger: GAAACGCCACCCCAGTGACCACCACTGCCCCGTGGG...GGCCACGGACCATTCCCGCCAAGAAGTGTCCAGAATCCATAAGGGGTGGAAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR CCA 90 bp TCTGACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGATAGATGACCCAGAGTaGCAGCGTGCCTGTGTACAG +
Preference number: 2 (lower is better)
Translates to: SDSAPRVQGAGFLRQTSRIDDPE*QRACVQ
Trigger: CTGTACACAGGCACGCTGCCACTCTGGGTCATCTAT...CCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR CAA 90 bp CCTGGGGCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATaGGTAGTTTGTCTTCCAGAGGGGACATGGGCACTGTGGCTGGTG +
Preference number: 2 (lower is better)
Translates to: PGASGHGGSGFRNEK*VVCLPEGTWALWLV
Trigger: CACCAGCCACAGTGCCCATGTCCCCTCTGGAAGACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR TCA 90 bp GATGACTCTCAAGGGGAGGATGGCTGTTTTGGCTGGGTGTGGTGGTGCACACCTTGCCACAGTGCTGGGTaGCCTCCAGCATGGTGCTCA +
Preference number: 2 (lower is better)
Translates to: DDSQGEDGCFGWVWWCTPCHSAG*PPAWCS
Trigger: TGAGCACCATGCTGGAGGTCACCCAGCACTGTGGCA...AGGTGTGCACCACCACACCCAGCCAAAACAGCCATCCTCCCCTTGAGAGTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR TCA 90 bp GGAAACCAGGGCATCAGTGTGACCTGGTCTAGGCAAGGCCTTTGCGGCAGACCCTGGCAAAGCCAACGGTaGACCTGGCGTAGTAGTACC +
Preference number: 2 (lower is better)
Translates to: GNQGISVTWSRQGLCGRPWQSQR*TWRSST
Trigger: GGTACTACTACGCCAGGTTCACCGTTGGCTTTGCCA...GGGTCTGCCGCAAAGGCCTTGCCTAGACCAGGTCACACTGATGCCCTGGTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR GCA 90 bp ATCAGTGTGACCTGGTCTAGGCAAGGCCTTTGCGGCAGACCCAGATCTGACTCAAGCAGGCGTGCTACCTaGCCACAGCCAAGGGAGCCA +
Preference number: 2 (lower is better)
Translates to: ISVTWSRQGLCGRPRSDSSRRAT*PQPREP
Trigger: TGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCT...TGAGTCAGATCTGGGTCTGCCGCAAAGGCCTTGCCTAGACCAGGTCACACTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR GCA 90 bp GCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCCAGATGAGGGCGCCTaGCCCCTTGGAGGTGGTAGG +
Preference number: 2 (lower is better)
Translates to: APPHPGNACRNAPQIKSSPDEGA*PLGGGR
Trigger: CCTACCACCTCCAAGGGGGCAGGCGCCCTCATCTGG...CGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR GCA 90 bp TCTGCTGTGGCTGTGTCACACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACAAGACGGCCAGCACGTTaGCCTGCAGTACCTGCAGCA +
Preference number: 2 (lower is better)
Translates to: SAVAVSHLSCQLLFWAWTRRPAR*PAVPAA
Trigger: TGCTGCAGGTACTGCAGGGCAACGTGCTGGCCGTCT...TGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACAGCCACAGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR GCA 90 bp GCTTTGACGAGGAGAACCAGGTGGTACGGGGCGAAGCAGACTAGGAAGATGACATGTAGGCGGTCACCTTaGAGGCCAGCAGGCCTAGGG +
Preference number: 2 (lower is better)
Translates to: ALTRRTRWYGAKQTRKMTCRRSP*RPAGLG
Trigger: CCCTAGGCCTGCTGGCCTGCAAGGTGACCGCCTACA...TGTCATCTTCCTAGTCTGCTTCGCCCCGTACCACCTGGTTCTCCTCGTCAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR GCA 90 bp GCTGTGTCACACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACATTTGGGGCTACCGCGATGGCCGAGTaGTTCACCTTGGCCTTCTGG +
Preference number: 2 (lower is better)
Translates to: AVSHLSCQLLFWAWTFGATAMAE*FTLAFW
Trigger: CCAGAAGGCCAAGGTGAAGCACTCGGCCATCGCGGT...AGCCCCAAATGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR CCA 90 bp TGGGGCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGCTTCCAGAGGGGACATaGGCACTGTGGCTGGTGGGC +
Preference number: 2 (lower is better)
Translates to: WGQWSRREWLQEREIGSLLPEGT*ALWLVG
Trigger: GCCCACCAGCCACAGTGCCCATGTCCCCTCTGGAAG...CAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR CCA 90 bp CACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGCCCCGAGGATGCCGCTaGGGACTCCTGGCACCCCTT +
Preference number: 2 (lower is better)
Translates to: HNAPPHPGNACRNAPQIKPRGCR*GLLAPL
Trigger: AAGGGGTGCCAGGAGTCCCCAGCGGCATCCTCGGGG...CTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR CCA 90 bp GCTGTGTCACACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACATTTGGGGCTTCGGTGTCCCTGCTGTaGGTGAGCCTGGTGACGTCT +
Preference number: 2 (lower is better)
Translates to: AVSHLSCQLLFWAWTFGASVSLL*VSLVTS
Trigger: AGACGTCACCAGGCTCACCCACAGCAGGGACACCGA...AGCCCCAAATGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR CAA 90 bp CAGACTAGGAAGATGACAACCACCGCGATGGCCGAGTGCTTCACCTaGGCCTTCTGGGCAGCGCTTAAGCCCATGCTCTGCTTGATGCTC +
Preference number: 2 (lower is better)
Translates to: QTRKMTTTAMAECFT*AFWAALKPMLCLML
Trigger: GAGCATCAAGCAGAGCATGGGCTTAAGCGCTGCCCAGAAGGCCAAGGTGAAGCACTCGGCCATCGCGGTGGTTGTCATCTTCCTAGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR GCA 90 bp AGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCACCAGGACCCCCAACCTaGCATCCCCCTGCCACACAG +
Preference number: 2 (lower is better)
Translates to: RNAPQIKSSPLMRTGQPPPGPPT*HPPATQ
Trigger: CTGTGTGGCAGGGGGATGGCAGGTTGGGGGTCCTGG...TGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR GCA 90 bp TCTTTCCACCCCTTATGGATTCTGGACACTTCTTGGCGGGAATGGTCCGTGGCCCTCCTCCCCTTGGCATaGAGCCACCTTCCATGTGGG +
Preference number: 2 (lower is better)
Translates to: SFHPLWILDTSWREWSVALLPLA*SHLPCG
Trigger: CCCACATGGAAGGTGGCTGCATGCCAAGGGGAGGAG...GGCCACGGACCATTCCCGCCAAGAAGTGTCCAGAATCCATAAGGGGTGGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR GCA 90 bp GCTGTGTCACACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACATTTGGGGCTTGTGCTCTGAGTGCATaGGATGTGCCCGAGGTGTCG +
Preference number: 2 (lower is better)
Translates to: AVSHLSCQLLFWAWTFGACALSA*DVPEVS
Trigger: CGACACCTCGGGCACATCGCATGCACTCAGAGCACA...AGCCCCAAATGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR GCA 90 bp GATGACTCTCAAGGGGAGGATGGCTGTTTTGGCTGGGTGTGGTGGTGCACACCTGTCTGCCCGGCTCTGTaGTCTGAGTGCATGCGATGT +
Preference number: 2 (lower is better)
Translates to: DDSQGEDGCFGWVWWCTPVCPAL*SECMRC
Trigger: ACATCGCATGCACTCAGAGCACAGAGCCGGGCAGAC...AGGTGTGCACCACCACACCCAGCCAAAACAGCCATCCTCCCCTTGAGAGTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR CCA 90 bp AGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACGGGCTCCCGGAAGCCTaGAGGTGTCGCTCCTCCCCT +
Preference number: 2 (lower is better)
Translates to: RQRLQKCSANKVIATDANGLPEA*RCRSSP
Trigger: AGGGGAGGAGCGACACCTCCAGGCTTCCGGGAGCCC...GTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR CCA 90 bp GCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGGCGCTGCCACAGTGCTaGGTGACCTCCAGCATGGTG +
Preference number: 2 (lower is better)
Translates to: APPHPGNACRNAPQIKSSALPQC*VTSSMV
Trigger: CACCATGCTGGAGGTCACCCAGCACTGTGGCAGCGC...CGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR CCA 90 bp GCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCTGGGCGTGGACATTTaGGGCTCCCCGTTGAGGACG +
Preference number: 2 (lower is better)
Translates to: APPHPGNACRNAPQIKSSLGVDI*GSPLRT
Trigger: CGTCCTCAACGGGGAGCCCCAAATGTCCACGCCCAG...CGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR CCA 90 bp CACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTGCTGTGCCGGGCACTaGGCTCCCCATGCAGGTGCT +
Preference number: 2 (lower is better)
Translates to: HNAPPHPGNACRNAPQIKCCAGH*APHAGA
Trigger: AGCACCTGCATGGGGAGCCCAGTGCCCGGCACAGCA...CTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR CAA 90 bp AGGAGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTaGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAAC +
Preference number: 2 (lower is better)
Translates to: RSPEGPQCTTASRQR*QKCSANKVIATDAN
Trigger: GTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR TCA 90 bp GCTTTGACGAGGAGAACCAGGTGGTACGGGGCGAAGCAGACTAGGAAGATGACACAGCATGGTGCTCACTaGCATTCTGAGGCAGGAGCC +
Preference number: 2 (lower is better)
Translates to: ALTRRTRWYGAKQTRKMTQHGAH*HSEAGA
Trigger: GGCTCCTGCCTCAGAATGTCAGTGAGCACCATGCTG...TGTCATCTTCCTAGTCTGCTTCGCCCCGTACCACCTGGTTCTCCTCGTCAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR GCA 90 bp AGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTCTTCCACCAGGACCCCCAACCTaGCATCCCCCTGCCACACAG +
Preference number: 2 (lower is better)
Translates to: SGHGGSGFRNEKLVVCLPPGPPT*HPPATQ
Trigger: CTGTGTGGCAGGGGGATGGCAGGTTGGGGGTCCTGG...TGGAAGACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR GCA 90 bp GCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCCAGAGGGCCCACAATaGACCACCGCATCCAGGCAA +
Preference number: 2 (lower is better)
Translates to: APPHPGNACRNAPQIKSSPEGPQ*TTASRQ
Trigger: TTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGG...CGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR GCA 90 bp CACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTTGGAGGTGGTAGGCTaGCCTATGCCCTCCTGGGCG +
Preference number: 2 (lower is better)
Translates to: HNAPPHPGNACRNAPQIKLEVVG*PMPSWA
Trigger: CGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAA...CTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR CCA 90 bp AGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGACAAAACGAGAGCGTaGCTCAGCCCCACGGCCCTG +
Preference number: 2 (lower is better)
Translates to: RNAPQIKSSPLMRTGQPPDKTRA*LSPTAL
Trigger: CAGGGCCGTGGGGCTGAGCCACGCTCTCGTTTTGTC...TGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR CCA 90 bp AGGCAGGCTGCTGATGAAGAGGCCCCACTGCCTGCCACATGCTCTCTGGGCTCCTCTTTCCACCCCTTATaGATTCTGGACACTTCTTGG +
Preference number: 2 (lower is better)
Translates to: RQAADEEAPLPATCSLGSSFHPL*ILDTSW
Trigger: CCAAGAAGTGTCCAGAATCCATAAGGGGTGGAAAGA...GGAGCCCAGAGAGCATGTGGCAGGCAGTGGGGCCTCTTCATCAGCAGCCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR CAA 90 bp TGCTTCACCTTGGCCTTCTGGGCAGCGCTTAAGCCCATGCTCTGCTaGATGCTCCTGAAAATCCGGTGGTTGGTGAAGGCGATGATGGAG +
Preference number: 2 (lower is better)
Translates to: CFTLAFWAALKPMLC*MLLKIRWLVKAMME
Trigger: CTCCATCATCGCCTTCACCAACCACCGGATTTTCAGGAGCATCAAGCAGAGCATGGGCTTAAGCGCTGCCCAGAAGGCCAAGGTGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR TCA 90 bp AGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCATGCCACAGTGCTGGGTaGCCTCCAGCATGGTGCTCA +
Preference number: 2 (lower is better)
Translates to: RNAPQIKSSPLMRTGQPPCHSAG*PPAWCS
Trigger: TGAGCACCATGCTGGAGGTCACCCAGCACTGTGGCA...TGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR GCA 90 bp AGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCACTCCTCCCCTTGGCATaGAGCCACCTTCCATGTGGG +
Preference number: 2 (lower is better)
Translates to: RNAPQIKSSPLMRTGQPPLLPLA*SHLPCG
Trigger: CCCACATGGAAGGTGGCTGCATGCCAAGGGGAGGAG...TGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR GCA 90 bp GCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCCACCAGGTACCTCTaGCAGCAGGCGTGCTACCTG +
Preference number: 2 (lower is better)
Translates to: ASRQRLQKCSANKVIATDATRYL*QQACYL
Trigger: CAGGTAGCACGCCTGCTGGCAGAGGTACCTGGTGGC...ATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR GCA 90 bp GCCGCACATGGCGTTCCTGTCTCCTCTGTAGTAGGAAAAGGCAGCGGCTTTGACCGACCAGGACTATCCTaGTCTCTTCGAAGGACACGT +
Preference number: 2 (lower is better)
Translates to: AAHGVPVSSVVGKGSGFDRPGLS*SLRRTR
Trigger: ACGTGTCCTTCGAAGAGAGCAGGATAGTCCTGGTCG...GTCAAAGCCGCTGCCTTTTCCTACTACAGAGGAGACAGGAACGCCATGTGCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR CCA 90 bp GCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATCTGCCACATGCTCTCTaGGCTCCCGGAAGCCTGGAG +
Preference number: 2 (lower is better)
Translates to: ASRQRLQKCSANKVIATDLPHAL*APGSLE
Trigger: CTCCAGGCTTCCGGGAGCCCAGAGAGCATGTGGCAG...ATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR CAA 90 bp CTTCATGGACCACTCTTTCCACCCCTTATGGATTCTGGACACTTCTaGGCGGGAATGGTCCGTGGCCAGCACGTAGATAATGGGGTCAGC +
Preference number: 2 (lower is better)
Translates to: LHGPLFPPLMDSGHF*AGMVRGQHVDNGVS
Trigger: GCTGACCCCATTATCTACGTGCTGGCCACGGACCATTCCCGCCAAGAAGTGTCCAGAATCCATAAGGGGTGGAAAGAGTGGTCCATGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR GCA 90 bp AGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTCTTCCAGCACAGGAACCACATTaGTGGCCCCAGGACCCCCAA +
Preference number: 2 (lower is better)
Translates to: SGHGGSGFRNEKLVVCLPAQEPH*WPQDPQ
Trigger: TTGGGGGTCCTGGGGCCAGCAATGTGGTTCCTGTGC...TGGAAGACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR CCA 90 bp CACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGACGAGGAGAACCAGGTaGTACGGGGCGAAGCAGACT +
Preference number: 2 (lower is better)
Translates to: HNAPPHPGNACRNAPQIKTRRTR*YGAKQT
Trigger: AGTCTGCTTCGCCCCGTACCACCTGGTTCTCCTCGT...CTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR TCA 90 bp GCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGAACTGCATAGCTGCCTaGCAAAACGAGAGCGTGGCT +
Preference number: 2 (lower is better)
Translates to: APPHPGNACRNAPQIKSSNCIAA*QNESVA
Trigger: AGCCACGCTCTCGTTTTGTCAGGCAGCTATGCAGTT...CGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR TCA 90 bp GCTGTGTCACACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACATTTGGGGCTACAGGAAGAGGATGCTaGCGTAGATGTTGCAGAAGA +
Preference number: 2 (lower is better)
Translates to: AVSHLSCQLLFWAWTFGATGRGC*RRCCRR
Trigger: TCTTCTGCAACATCTACGTCAGCATCCTCTTCCTGT...AGCCCCAAATGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR GCA 90 bp CACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGGTGTCACACCTGTCCTaGCAACTGTTGTTCTGGGCG +
Preference number: 2 (lower is better)
Translates to: HNAPPHPGNACRNAPQIKVSHLS*QLLFWA
Trigger: CGCCCAGAACAACAGTTGGCAGGACAGGTGTGACAC...CTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR GCA 90 bp CACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGGACAGGCGTGAGCACTaGCCTGCCTTGTGCTTTTAT +
Preference number: 2 (lower is better)
Translates to: HNAPPHPGNACRNAPQIKDRREH*PALCFY
Trigger: ATAAAAGCACAAGGCAGGGCAGTGCTCACGCCTGTC...CTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR GCA 90 bp CGTCTGTCTTCATGGACCACTCTTTCCACCCCTTATGGATTCTGGACACTTCTTGTGTCACACCTGTCCTaGCAACTGTTGTTCTGGGCG +
Preference number: 2 (lower is better)
Translates to: RLSSWTTLSTPYGFWTLLVSHLS*QLLFWA
Trigger: CGCCCAGAACAACAGTTGGCAGGACAGGTGTGACAC...AAGAAGTGTCCAGAATCCATAAGGGGTGGAAAGAGTGGTCCATGAAGACAGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR GCA 90 bp GCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCAACGCTTGCAGAAATaGTCCGCAAATAAAGTCATC +
Preference number: 2 (lower is better)
Translates to: APPHPGNACRNAPQIKSSQRLQK*SANKVI
Trigger: GATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTG...CGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR GCA 90 bp AGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCACTTAAGCCCATGCTCTaGTTGATGCTCCTGAAAATC +
Preference number: 2 (lower is better)
Translates to: RNAPQIKSSPLMRTGQPPLKPML*LMLLKI
Trigger: GATTTTCAGGAGCATCAAGCAGAGCATGGGCTTAAG...TGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR CAA 90 bp GCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCCACGCAGTCAGGCAGTaGGCCGGCACCCCCAGCGTG +
Preference number: 3 (lower is better)
Translates to: APLEVVGCPMPSWALPQCHAVRQ*AGTPSV
Trigger: CACGCTGGGGGTGCCGGCCAACTGCCTGACTGCGTG...GCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR CAA 90 bp TGCGTCTGCCCGGCTCTGTGCTCTGAGTGCATGCGATGTGCCCGAGGTGTCGGGAGGGCGCCTGCCCCCTaGGAGGTGGTAGGCTGCCCT +
Preference number: 3 (lower is better)
Translates to: CVCPALCSECMRCARGVGRAPAP*EVVGCP
Trigger: AGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCCCT...CCCGACACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR CCA 72 bp GTACCTGCAGCAGCGCCAGCCACGCAGTCAGGCAGTTaGCCGGCACCCCCAGCGTGCACACCGCGCTGTACA +
Preference number: 3 (lower is better)
Translates to: VPAAAPATQSGS*PAPPACTPRCT
Trigger: TGTACAGCGCGGTGTGCACGCTGGGGGTGCCGGCCAACTGCCTGACTGCGTGGCTGGCGCTGCTGCAGGTAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR CAA 90 bp GGTGCTGCGTCTGCCCGGCTCTGTGCTCTGAGTGCATGCGATGTGCCCGAGGTGATTTGGGGCTCCCCGTaGAGGACGCCTGGGCTGCGC +
Preference number: 3 (lower is better)
Translates to: GAASARLCALSACDVPEVIWGSP*RTPGLR
Trigger: GCGCAGCCCAGGCGTCCTCAACGGGGAGCCCCAAAT...CACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCAGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR GCA 72 bp GGCTCCCCATGCAGGTGCTGCGTCTGCCCGGCTCTGTaGTCTGAGTGCATGCGATGTGCCCGAGGTGTCGGG +
Preference number: 3 (lower is better)
Translates to: GSPCRCCVCPAL*SECMRCARGVG
Trigger: CCCGACACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCAGCACCTGCATGGGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR GCA 72 bp TGCCGGGCACTGGGCTCCCCATGCAGGTGCTGCGTCTaGCCGGCTCTGTGCTCTGAGTGCATGCGATGTGCC +
Preference number: 3 (lower is better)
Translates to: CRALGSPCRCCV*PALCSECMRCA
Trigger: GGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCAGCACCTGCATGGGGAGCCCAGTGCCCGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR GCA 72 bp GTGCTGTGCCGGGCACTGGGCTCCCCATGCAGGTGCTaGGTCTGCCCGGCTCTGTGCTCTGAGTGCATGCGA +
Preference number: 3 (lower is better)
Translates to: VLCRALGSPCRC*VCPALCSECMR
Trigger: TCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCAGCACCTGCATGGGGAGCCCAGTGCCCGGCACAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR GCA 72 bp GCCACGCAGTCAGGCAGTTGGCCGGCACCCCCAGCGTaGACACCGCGCTGTACACCACGACCAGGACTATCC +
Preference number: 3 (lower is better)
Translates to: ATQSGSWPAPPA*TPRCTPRPGLS
Trigger: GGATAGTCCTGGTCGTGGTGTACAGCGCGGTGTGCACGCTGGGGGTGCCGGCCAACTGCCTGACTGCGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR GCA 72 bp AGCCAGCCAGGCAGGCTGCTGATGAAGAGGCCCCACTaGCTGCCACATGCTCTCTGGGCTCCCGGAAGCCTG +
Preference number: 3 (lower is better)
Translates to: SQPGRLLMKRPH*LPHALWAPGSL
Trigger: CAGGCTTCCGGGAGCCCAGAGAGCATGTGGCAGGCAGTGGGGCCTCTTCATCAGCAGCCTGCCTGGCTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR GCA 72 bp AACAGGGCAGCCACCAGGTACCTCTGCCAGCAGGCGTaGTACCTGCCCACAGCCAAGGGAGCCAGCCAGGCA +
Preference number: 3 (lower is better)
Translates to: NRAATRYLCQQA*YLPTAKGASQA
Trigger: TGCCTGGCTGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR GCA 72 bp CAGCTCAGCACAGACCCAACCCCAGATGAGGGCGCCTaGCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTC +
Preference number: 3 (lower is better)
Translates to: QLSTDPTPDEGA*PLGGGRLPYAL
Trigger: GAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCCCTCATCTGGGGTTGGGTCTGTGCTGAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR CAA 90 bp GGTGCTGCGTCTGCCCGGCTCTGTGCTCTGAGTGCATGCGATGTGCCCGAGGTGGACTCCTGGCACCCCTaGCCTCTGCTGTGGCTGTGT +
Preference number: 3 (lower is better)
Translates to: GAASARLCALSACDVPEVDSWHP*PLLWLC
Trigger: ACACAGCCACAGCAGAGGCAAGGGGTGCCAGGAGTC...CACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCAGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR GCA 72 bp GCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTaGCAGCAGGCGTGCTACCTGCCCACAGCCAAGGGA +
Preference number: 3 (lower is better)
Translates to: ATDANRAATRYL*QQACYLPTAKG
Trigger: TCCCTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR GCA 72 bp TTTGCGGCAGACCCAGATCTGACTCAGCCCCGAGGGTaGAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGC +
Preference number: 3 (lower is better)
Translates to: FAADPDLTQPRG*RELAFSARQAG
Trigger: GCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTCAGATCTGGGTCTGCCGCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR CCA 72 bp CCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACATTTaGGGCTCCCCGTTGAGGACGCCTGGGCTGCGCTCT +
Preference number: 3 (lower is better)
Translates to: PVLPTVVLGVDI*GSPLRTPGLRS
Trigger: AGAGCGCAGCCCAGGCGTCCTCAACGGGGAGCCCCAAATGTCCACGCCCAGAACAACAGTTGGCAGGACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR CAA 90 bp GGCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCCGAGAAATTGGTAGTTaGTCTTCCAGAGGGGACATG +
Preference number: 3 (lower is better)
Translates to: GACPLGGGRLPYALLGAAREIGS*SSRGDM
Trigger: CATGTCCCCTCTGGAAGACAAACTACCAATTTCTCG...GGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR CAA 90 bp GCTGTGTCACACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACATTTGGGGCTAGGGCGCCTGCCCCCTaGGAGGTGGTAGGCTGCCCT +
Preference number: 3 (lower is better)
Translates to: AVSHLSCQLLFWAWTFGARAPAP*EVVGCP
Trigger: AGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCCCT...AGCCCCAAATGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR CAA 90 bp GCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCCTGAAAATCCGGTGGTaGGTGAAGGCGATGATGGAG +
Preference number: 3 (lower is better)
Translates to: APLEVVGCPMPSWALPQCLKIRW*VKAMME
Trigger: CTCCATCATCGCCTTCACCAACCACCGGATTTTCAG...GCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR CAA 90 bp GCCGCACATGGCGTTCCTGTCTCCTCTGTAGTAGGAAAAGGCAGCGGCTTTGACATTTGGGGCTCCCCGTaGAGGACGCCTGGGCTGCGC +
Preference number: 3 (lower is better)
Translates to: AAHGVPVSSVVGKGSGFDIWGSP*RTPGLR
Trigger: GCGCAGCCCAGGCGTCCTCAACGGGGAGCCCCAAAT...GTCAAAGCCGCTGCCTTTTCCTACTACAGAGGAGACAGGAACGCCATGTGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR CAA 90 bp GGAAACCAGGGCATCAGTGTGACCTGGTCTAGGCAAGGCCTTTGCGGCAGACCCGACTCCTGGCACCCCTaGCCTCTGCTGTGGCTGTGT +
Preference number: 3 (lower is better)
Translates to: GNQGISVTWSRQGLCGRPDSWHP*PLLWLC
Trigger: ACACAGCCACAGCAGAGGCAAGGGGTGCCAGGAGTC...GGGTCTGCCGCAAAGGCCTTGCCTAGACCAGGTCACACTGATGCCCTGGTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR-3UTR CAA 90 bp AGGCAGGAGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCATCGAAGGACACGTTGTaGCAGGTCTTGGCGGAGAGG +
Preference number: 3 (lower is better)
Translates to: RQEPRGPTMHHRIQATLASKDTL*QVLAER
Trigger: CCTCTCCGCCAAGACCTGCAACAACGTGTCCTTCGA...TGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCTCCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR GCA 72 bp CAGGGCATCAGTGTGACCTGGTCTAGGCAAGGCCTTTaGGGCAGACCCAGATCTGACTCAGCCCCGAGGGTG +
Preference number: 3 (lower is better)
Translates to: QGISVTWSRQGL*GRPRSDSAPRV
Trigger: CACCCTCGGGGCTGAGTCAGATCTGGGTCTGCCGCAAAGGCCTTGCCTAGACCAGGTCACACTGATGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR GCA 72 bp CCAGGACTATCCTGCTCTCTTCGAAGGACACGTTGTTaGAGGTCTTGGCGGAGAGGCCCAGGGAGGCCCACG +
Preference number: 3 (lower is better)
Translates to: PGLSCSLRRTRC*RSWRRGPGRPT
Trigger: CGTGGGCCTCCCTGGGCCTCTCCGCCAAGACCTGCAACAACGTGTCCTTCGAAGAGAGCAGGATAGTCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR CAA 90 bp GCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCCGAGAAATTGGTAGTTaGTCTTCCAGAGGGGACATG +
Preference number: 3 (lower is better)
Translates to: APLEVVGCPMPSWALPQCREIGS*SSRGDM
Trigger: CATGTCCCCTCTGGAAGACAAACTACCAATTTCTCG...GCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR CAA 90 bp GGAAACCAGGGCATCAGTGTGACCTGGTCTAGGCAAGGCCTTTGCGGCAGACCCGGGAGGATGGCTGTTTaGGCTGGGTGTGGTGGTGCA +
Preference number: 3 (lower is better)
Translates to: GNQGISVTWSRQGLCGRPGRMAV*AGCGGA
Trigger: TGCACCACCACACCCAGCCAAAACAGCCATCCTCCC...GGGTCTGCCGCAAAGGCCTTGCCTAGACCAGGTCACACTGATGCCCTGGTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR TCA 72 bp GGCCTAGGGTCCAGCGGTGCTGGTTGCGGATATAGATaGCCCAGAGTGGCAGCGTGCCTGTGTACAGCAGCT +
Preference number: 3 (lower is better)
Translates to: GLGSSGAGCGYR*PRVAACLCTAA
Trigger: AGCTGCTGTACACAGGCACGCTGCCACTCTGGGTCATCTATATCCGCAACCAGCACCGCTGGACCCTAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR CCA 72 bp CCAGCGGTGCTGGTTGCGGATATAGATGACCCAGAGTaGCAGCGTGCCTGTGTACAGCAGCTCGCAGAGTGC +
Preference number: 3 (lower is better)
Translates to: PAVLVADIDDPE*QRACVQQLAEC
Trigger: GCACTCTGCGAGCTGCTGTACACAGGCACGCTGCCACTCTGGGTCATCTATATCCGCAACCAGCACCGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR CCA 72 bp ACCACCGCGATGGCCGAGTGCTTCACCTTGGCCTTCTaGGCAGCGCTTAAGCCCATGCTCTGCTTGATGCTC +
Preference number: 3 (lower is better)
Translates to: TTAMAECFTLAF*AALKPMLCLML
Trigger: GAGCATCAAGCAGAGCATGGGCTTAAGCGCTGCCCAGAAGGCCAAGGTGAAGCACTCGGCCATCGCGGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR CAA 90 bp GCTGTGTCACACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACATTTGGGGCTTCTGGGCGTGGACATTaGGGGCTCCCCGTTGAGGAC +
Preference number: 3 (lower is better)
Translates to: AVSHLSCQLLFWAWTFGASGRGH*GLPVED
Trigger: GTCCTCAACGGGGAGCCCCAAATGTCCACGCCCAGA...AGCCCCAAATGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR TCA 72 bp GAACCAGGTGGTACGGGGCGAAGCAGACTAGGAAGATaGCAACCACCGCGATGGCCGAGTGCTTCACCTTGG +
Preference number: 3 (lower is better)
Translates to: EPGGTGRSRLGR*QPPRWPSASPW
Trigger: CCAAGGTGAAGCACTCGGCCATCGCGGTGGTTGTCATCTTCCTAGTCTGCTTCGCCCCGTACCACCTGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR GCA 72 bp CCCCTTGCCTCTGCTGTGGCTGTGTCACACCTGTCCTaGCAACTGTTGTTCTGGGCGTGGACATTTGGGGCT +
Preference number: 3 (lower is better)
Translates to: PLASAVAVSHLS*QLLFWAWTFGA
Trigger: AGCCCCAAATGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACAGCCACAGCAGAGGCAAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR GCA 72 bp CAGACTAGGAAGATGACAACCACCGCGATGGCCGAGTaGTTCACCTTGGCCTTCTGGGCAGCGCTTAAGCCC +
Preference number: 3 (lower is better)
Translates to: QTRKMTTTAMAE*FTLAFWAALKP
Trigger: GGGCTTAAGCGCTGCCCAGAAGGCCAAGGTGAAGCACTCGGCCATCGCGGTGGTTGTCATCTTCCTAGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR CCA 72 bp TTTGTCTTCCAGAGGGGACATGGGCACTGTGGCTGGTaGGCTCAGTGCACAGGAACCACATTGCTGGCCCCA +
Preference number: 3 (lower is better)
Translates to: FVFQRGHGHCGW*AQCTGTTLLAP
Trigger: TGGGGCCAGCAATGTGGTTCCTGTGCACTGAGCCCACCAGCCACAGTGCCCATGTCCCCTCTGGAAGACAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR CAA 90 bp GGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACTTCAGGAACGAGAAATaGGTAGTTTGTCTTCCAGAG +
Preference number: 3 (lower is better)
Translates to: GGGRLPYALLGAATVLGDFRNEK*VVCLPE
Trigger: CTCTGGAAGACAAACTACCAATTTCTCGTTCCTGAA...GTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR CAA 90 bp GGAAACCAGGGCATCAGTGTGACCTGGTCTAGGCAAGGCCTTTGCGGCAGACCCGCATCCAGGCAACGCTaGCAGAAATGCTCCGCAAAT +
Preference number: 3 (lower is better)
Translates to: GNQGISVTWSRQGLCGRPASRQR*QKCSAN
Trigger: ATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGC...GGGTCTGCCGCAAAGGCCTTGCCTAGACCAGGTCACACTGATGCCCTGGTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR CCA 72 bp TGCAGCCACCTTCCATGTGGGAAAGCCTGGGGCCAGTaGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATT +
Preference number: 3 (lower is better)
Translates to: CSHLPCGKAWGQ*SRREWLQEREI
Trigger: AATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGCCCCAGGCTTTCCCACATGGAAGGTGGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR-3UTR CAA 90 bp TTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCACGTTGTTGCAGGTCTaGGCGGAGAGGCCCAGGGAG +
Preference number: 3 (lower is better)
Translates to: LQKCSANKVIATDANRAATLLQV*AERPRE
Trigger: CTCCCTGGGCCTCTCCGCCAAGACCTGCAACAACGT...GGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR TCA 72 bp TCCTGTCTCCTCTGTAGTAGGAAAAGGCAGCGGCTTTaGCGAGGAGAACCAGGTGGTACGGGGCGAAGCAGA +
Preference number: 3 (lower is better)
Translates to: SCLLCSRKRQRL*RGEPGGTGRSR
Trigger: TCTGCTTCGCCCCGTACCACCTGGTTCTCCTCGTCAAAGCCGCTGCCTTTTCCTACTACAGAGGAGACAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR GCA 72 bp TGCACACCGCGCTGTACACCACGACCAGGACTATCCTaGTCTCTTCGAAGGACACGTTGTTGCAGGTCTTGG +
Preference number: 3 (lower is better)
Translates to: CTPRCTPRPGLS*SLRRTRCCRSW
Trigger: CCAAGACCTGCAACAACGTGTCCTTCGAAGAGAGCAGGATAGTCCTGGTCGTGGTGTACAGCGCGGTGTGCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR CAA 90 bp GCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGGATTCTGGACACTTCTaGGCGGGAATGGTCCGTGGC +
Preference number: 3 (lower is better)
Translates to: APPHPGNACRNAPQIKSSDSGHF*AGMVRG
Trigger: GCCACGGACCATTCCCGCCAAGAAGTGTCCAGAATC...CGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR GCA 72 bp AGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTaGAGAAATGCTCCGCAAATAAAGTCATCGCCACTG +
Preference number: 3 (lower is better)
Translates to: RAHNAPPHPGNA*RNAPQIKSSPL
Trigger: CAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR GCA 72 bp ACCTTGGCCTTCTGGGCAGCGCTTAAGCCCATGCTCTaGTTGATGCTCCTGAAAATCCGGTGGTTGGTGAAG +
Preference number: 3 (lower is better)
Translates to: TLAFWAALKPML*LMLLKIRWLVK
Trigger: CTTCACCAACCACCGGATTTTCAGGAGCATCAAGCAGAGCATGGGCTTAAGCGCTGCCCAGAAGGCCAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR CAA 90 bp GCTTTGACGAGGAGAACCAGGTGGTACGGGGCGAAGCAGACTAGGAAGATGACAGCATCCAGGCAACGCTaGCAGAAATGCTCCGCAAAT +
Preference number: 3 (lower is better)
Translates to: ALTRRTRWYGAKQTRKMTASRQR*QKCSAN
Trigger: ATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGC...TGTCATCTTCCTAGTCTGCTTCGCCCCGTACCACCTGGTTCTCCTCGTCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR CAA 90 bp ATCAGTGTGACCTGGTCTAGGCAAGGCCTTTGCGGCAGACCCAGATCTGACTCACTGTCCTGCCAACTGTaGTTCTGGGCGTGGACATTT +
Preference number: 3 (lower is better)
Translates to: ISVTWSRQGLCGRPRSDSLSCQL*FWAWTF
Trigger: AAATGTCCACGCCCAGAACAACAGTTGGCAGGACAG...TGAGTCAGATCTGGGTCTGCCGCAAAGGCCTTGCCTAGACCAGGTCACACTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR TCA 72 bp GGGCAGGGAGGAGGATTGATCTCGATGGTGACCCAGTaGGGTAGGTGTCATTGGCCCCATTTTACAGATAGG +
Preference number: 3 (lower is better)
Translates to: GQGGGLISMVTQ*GRCHWPHFTDR
Trigger: CCTATCTGTAAAATGGGGCCAATGACACCTACCTCACTGGGTCACCATCGAGATCAATCCTCCTCCCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR CCA 72 bp AAGCCCATGCTCTGCTTGATGCTCCTGAAAATCCGGTaGTTGGTGAAGGCGATGATGGAGAGAGGGATGGCA +
Preference number: 3 (lower is better)
Translates to: KPMLCLMLLKIR*LVKAMMERGMA
Trigger: TGCCATCCCTCTCTCCATCATCGCCTTCACCAACCACCGGATTTTCAGGAGCATCAAGCAGAGCATGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR CCA 72 bp TCTTCATGGACCACTCTTTCCACCCCTTATGGATTCTaGACACTTCTTGGCGGGAATGGTCCGTGGCCAGCA +
Preference number: 3 (lower is better)
Translates to: SSWTTLSTPYGF*TLLGGNGPWPA
Trigger: TGCTGGCCACGGACCATTCCCGCCAAGAAGTGTCCAGAATCCATAAGGGGTGGAAAGAGTGGTCCATGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR CAA 90 bp TCTGCTGTGGCTGTGTCACACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACACGAGAAATTGGTAGTTaGTCTTCCAGAGGGGACATG +
Preference number: 3 (lower is better)
Translates to: SAVAVSHLSCQLLFWAWTREIGS*SSRGDM
Trigger: CATGTCCCCTCTGGAAGACAAACTACCAATTTCTCG...TGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACAGCCACAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR GCA 72 bp CAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATaGTCCGCAAATAAAGTCATCGCCACTGATGCGAAC +
Preference number: 3 (lower is better)
Translates to: QCTTASRQRLQK*SANKVIATDAN
Trigger: GTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
3UTR CCA 72 bp ACGTCTGTCTTCATGGACCACTCTTTCCACCCCTTATaGATTCTGGACACTTCTTGGCGGGAATGGTCCGTG +
Preference number: 3 (lower is better)
Translates to: TSVFMDHSFHPL*ILDTSWREWSV
Trigger: CACGGACCATTCCCGCCAAGAAGTGTCCAGAATCCATAAGGGGTGGAAAGAGTGGTCCATGAAGACAGACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR CAA 90 bp CGTCTGTCTTCATGGACCACTCTTTCCACCCCTTATGGATTCTGGACACTTCTTTCTTCGAAGGACACGTaGTTGCAGGTCTTGGCGGAG +
Preference number: 3 (lower is better)
Translates to: RLSSWTTLSTPYGFWTLLSSKDT*LQVLAE
Trigger: CTCCGCCAAGACCTGCAACAACGTGTCCTTCGAAGA...AAGAAGTGTCCAGAATCCATAAGGGGTGGAAAGAGTGGTCCATGAAGACAGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR-3UTR CAA 90 bp GCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCTTCAGGAACGAGAAATaGGTAGTTTGTCTTCCAGAG +
Preference number: 3 (lower is better)
Translates to: ANKVIATDANRAATRYLCFRNEK*VVCLPE
Trigger: CTCTGGAAGACAAACTACCAATTTCTCGTTCCTGAA...GCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GGCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCAGGGCCCCGCCTGCGTaGCTAGCCTCGCACCCCTCC +
Preference number: 4 (lower is better)
Translates to: GACPLGGGRLPYALLGAARAPPA*LASHPS
Trigger: GGAGGGGTGCGAGGCTAGCCACGCAGGCGGGGCCCT...GGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
CDS-3UTR CCA 90 bp GGCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCAGGCCCACGGGGCAGTaGTGGTCACTGGGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: GACPLGGGRLPYALLGAARPTGQ*WSLGWR
Trigger: ACGCCACCCCAGTGACCACCACTGCCCCGTGGGCCT...GGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GGCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCGCCGCTGGGGACTCCTaGCACCCCTTGCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: GACPLGGGRLPYALLGAAAAGDS*HPLPLL
Trigger: CAGCAGAGGCAAGGGGTGCCAGGAGTCCCCAGCGGC...GGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp CCAACCCCAGATGAGGGCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCACCCAGGGCCCCGCCTaGGTGGCTAGCCTCGCACCC +
Preference number: 4 (lower is better)
Translates to: PTPDEGACPLGGGRLPYATQGPA*VASLAP
Trigger: GGGTGCGAGGCTAGCCACGCAGGCGGGGCCCTGGGT...GGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCCCTCATCTGGGGTTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000392585.2
CDS-3UTR CCA 90 bp GGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCAGGGCCCCGCCTGCGTaGCTAGCCTCGCACCCCTCC +
Preference number: 4 (lower is better)
Translates to: GGRLPYALLGAATVLGDLRAPPA*LASHPS
Trigger: GGAGGGGTGCGAGGCTAGCCACGCAGGCGGGGCCCT...GAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
CDS-3UTR CCA 90 bp CAGATGAGGGCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGAGGGCCCCGCCTGCGTaGCTAGCCTCGCACCCCTCC +
Preference number: 4 (lower is better)
Translates to: QMRAPAPLEVVGCPMPSWRAPPA*LASHPS
Trigger: GGAGGGGTGCGAGGCTAGCCACGCAGGCGGGGCCCT...CCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCCCTCATCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
CDS-3UTR GCA 90 bp GCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACCAGATGAGGGCGCCTaGCCCCTTGGAGGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: APAPLEVVGCPMPSWALPPDEGA*PLGGGR
Trigger: CCTACCACCTCCAAGGGGGCAGGCGCCCTCATCTGG...TGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCGCCTGGGCTGCGCTCTaGGAGCCAGCAGCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: GGRLPYALLGAATVLGDLAWAAL*EPAAGH
Trigger: GTGGCCAGCTGCTGGCTCCCAGAGCGCAGCCCAGGC...GAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCATGCTGTGCCGGGCACTaGGCTCCCCATGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: APAPLEVVGCPMPSWALPCCAGH*APHAGA
Trigger: AGCACCTGCATGGGGAGCCCAGTGCCCGGCACAGCA...TGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp TCTGACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGACCCAGGGCCCCGCCTaGGTGGCTAGCCTCGCACCC +
Preference number: 4 (lower is better)
Translates to: SDSAPRVQGAGFLRQTSRTQGPA*VASLAP
Trigger: GGGTGCGAGGCTAGCCACGCAGGCGGGGCCCTGGGT...CCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000392585.2
CDS-3UTR GCA 90 bp GGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCCCGGCACCCCCAGCGTaGACACCGCGCTGTACACCA +
Preference number: 4 (lower is better)
Translates to: GGRLPYALLGAATVLGDLPAPPA*TPRCTP
Trigger: TGGTGTACAGCGCGGTGTGCACGCTGGGGGTGCCGG...GAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCCGGCACCCCCAGCGTaGACACCGCGCTGTACACCA +
Preference number: 4 (lower is better)
Translates to: GGGRLPYALLGAATVLGDPAPPA*TPRCTP
Trigger: TGGTGTACAGCGCGGTGTGCACGCTGGGGGTGCCGG...GTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCGCCAGCACGTTGCCCTaGAGTACCTGCAGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: APLEVVGCPMPSWALPQCASTLP*STCSSA
Trigger: GGCGCTGCTGCAGGTACTGCAGGGCAACGTGCTGGC...GCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACCCAGAGTGGCAGCGTaGCTGTGTACAGCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: APAPLEVVGCPMPSWALPPRVAA*LCTAAR
Trigger: GCGAGCTGCTGTACACAGGCACGCTGCCACTCTGGG...TGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACAGGGCCACGGGCGACTaGAGCTCCTCGGTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: GGGRLPYALLGAATVLGDRATGD*SSSVSL
Trigger: CAGGGACACCGAGGAGCTGCAGTCGCCCGTGGCCCT...GTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACTCTGCCAGCAGGCGTaGTACCTGCCCACAGCCAAG +
Preference number: 4 (lower is better)
Translates to: APAPLEVVGCPMPSWALPLCQQA*YLPTAK
Trigger: CTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAG...TGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCATGGGCGCTGCCACAGTaGTGGGTGACCTCCAGCATG +
Preference number: 4 (lower is better)
Translates to: APAPLEVVGCPMPSWALPWALPQ*WVTSSM
Trigger: CATGCTGGAGGTCACCCAGCACTGTGGCAGCGCCCA...TGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCCAGGGGCTCCCGGAAGCCTaGAGGTGTCGCTCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: GRLPYALLGAATVLGDLQGLPEA*RCRSSP
Trigger: AGGGGAGGAGCGACACCTCCAGGCTTCCGGGAGCCC...CTGGAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCCAGCTGGGAGCCAGCAGCTaGCCACCCTGCCCCACGGTT +
Preference number: 4 (lower is better)
Translates to: GRLPYALLGAATVLGDLQLGASS*PPCPTV
Trigger: AACCGTGGGGCAGGGTGGCCAGCTGCTGGCTCCCAG...CTGGAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GGCAGGAGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGGCCTGGGCTGCGCTCTaGGAGCCAGCAGCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: GRSPEGPQCTTASRQRLQAWAAL*EPAAGH
Trigger: GTGGCCAGCTGCTGGCTCCCAGAGCGCAGCCCAGGC...CTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCTCCTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCCCGTTGAGGACGCCTaGGCTGCGCTCTGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: GGGRLPYALLGAATVLGDPVEDA*AALWEP
Trigger: TGGCTCCCAGAGCGCAGCCCAGGCGTCCTCAACGGG...GTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp CCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGCCGCTGGGGACTCCTaGCACCCCTTGCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: PLEVVGCPMPSWALPQCWAAGDS*HPLPLL
Trigger: CAGCAGAGGCAAGGGGTGCCAGGAGTCCCCAGCGGC...CCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR CAA 72 bp AGTACCTGCAGCAGCGCCAGCCACGCAGTCAGGCAGTaGGCCGGCACCCCCAGCGTGCACACCGCGCTGTAC +
Preference number: 4 (lower is better)
Translates to: STCSSASHAVRQ*AGTPSVHTALY
Trigger: GTACAGCGCGGTGTGCACGCTGGGGGTGCCGGCCAACTGCCTGACTGCGTGGCTGGCGCTGCTGCAGGTACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR TCA 90 bp CAGATGAGGGCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGCGGCAGACCCAGATCTaGCTCAGCCCCGAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: QMRAPAPLEVVGCPMPSWRQTQI*LSPEGA
Trigger: TGCACCCTCGGGGCTGAGTCAGATCTGGGTCTGCCG...CCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCCCTCATCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR TCA 90 bp CCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGCCCGGCTCTGTGCTCTaGGTGCATGCGATGTGCCCG +
Preference number: 4 (lower is better)
Translates to: PLEVVGCPMPSWALPQCWPGSVL*VHAMCP
Trigger: CGGGCACATCGCATGCACTCAGAGCACAGAGCCGGG...CCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp GTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCCAGCGCCAGCACGTTGCCCTaGAGTACCTGCAGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: VGCPMPSWALPQCWVTSSASTLP*STCSSA
Trigger: GGCGCTGCTGCAGGTACTGCAGGGCAACGTGCTGGC...GCTGGAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGTAGGCGGTCACCTTaGAGGCCAGCAGGCCTAGGG +
Preference number: 4 (lower is better)
Translates to: APLEVVGCPMPSWALPQCCRRSP*RPAGLG
Trigger: CCCTAGGCCTGCTGGCCTGCAAGGTGACCGCCTACA...GCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GCAGTACCTGCAGCAGCGCCAGCCACGCAGTCAGGCAGTTGGCCGGCACCCCCATTGGAGGTGGTAGGCTaGCCTATGCCCTCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: AVPAAAPATQSGSWPAPPLEVVG*PMPSWA
Trigger: CGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAA...TGGGGGTGCCGGCCAACTGCCTGACTGCGTGGCTGGCGCTGCTGCAGGTACTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR GCA 90 bp CAGATGAGGGCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGTCCCCATGCAGGTGCTaGGTCTGCCCGGCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: QMRAPAPLEVVGCPMPSWSPCRC*VCPALC
Trigger: GCACAGAGCCGGGCAGACGCAGCACCTGCATGGGGA...CCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCCCTCATCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp CCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCAACTGCTGGCACTGGGCTCCCCATaGAGGTGCTGCGTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: PRGCRELAFSARQAGQLLALGSP*RCCVCP
Trigger: CGGGCAGACGCAGCACCTGCATGGGGAGCCCAGTGC...CAGCAGTTGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp GCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACCTCGCTGCGCTTGCTaGGTTTCTCCGGGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: APAPLEVVGCPMPSWALPPRCAC*VSPGEC
Trigger: ACACTCACCCGGAGAAACCCAGCAAGCGCAGCGAGG...TGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000539291.6
CDS-3UTR CCA 90 bp GACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCAAGGCCCACGGGGCAGTaGTGGTCACTGGGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: DSAPRVQGAGFLRQTSRPRPTGQ*WSLGWR
Trigger: ACGCCACCCCAGTGACCACCACTGCCCCGTGGGCCT...TGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp CCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCAACTGCTGACGCAGTCAGGCAGTTaGCCGGCACCCCCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: PRGCRELAFSARQAGQLLTQSGS*PAPPAC
Trigger: GCACGCTGGGGGTGCCGGCCAACTGCCTGACTGCGT...CAGCAGTTGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp TGCGTCTGCCCGGCTCTGTGCTCTGAGTGCATGCGATGTGCCCGAGGTGTCGGGACGCAGTCAGGCAGTTaGCCGGCACCCCCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: CVCPALCSECMRCARGVGTQSGS*PAPPAC
Trigger: GCACGCTGGGGGTGCCGGCCAACTGCCTGACTGCGT...CCCGACACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp GCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCCTTCCAGAGGGGACATaGGCACTGTGGCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: APLEVVGCPMPSWALPQCLPEGT*ALWLVG
Trigger: GCCCACCAGCCACAGTGCCCATGTCCCCTCTGGAAG...GCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GCAGTACCTGCAGCAGCGCCAGCCACGCAGTCAGGCAGTTGGCCGGCACCCCCACTGCCACATGCTCTCTaGGCTCCCGGAAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: AVPAAAPATQSGSWPAPPLPHAL*APGSLE
Trigger: CTCCAGGCTTCCGGGAGCCCAGAGAGCATGTGGCAG...TGGGGGTGCCGGCCAACTGCCTGACTGCGTGGCTGGCGCTGCTGCAGGTACTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR CCA 90 bp GGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCCAGTGCCCTATGCCCTCCTaGGCGCTGCCACAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GRLPYALLGAATVLGDLQCPMPS*ALPQCW
Trigger: CCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCA...CTGGAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCAGCCGCTGGGGACTCCTaGCACCCCTTGCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: DSAPRVQGAGFLRQTSRPAAGDS*HPLPLL
Trigger: CAGCAGAGGCAAGGGGTGCCAGGAGTCCCCAGCGGC...TGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp GGTGCTGCGTCTGCCCGGCTCTGTGCTCTGAGTGCATGCGATGTGCCCGAGGTGCCCCGAGGATGCCGCTaGGGACTCCTGGCACCCCTT +
Preference number: 4 (lower is better)
Translates to: GAASARLCALSACDVPEVPRGCR*GLLAPL
Trigger: AAGGGGTGCCAGGAGTCCCCAGCGGCATCCTCGGGG...CACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCAGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR TCA 90 bp AGGCAGGCTGCTGATGAAGAGGCCCCACTGCCTGCCACATGCTCTCTGGGCTCCTTTGGGGCTCCCCGTTaGGGACGCCTGGGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: RQAADEEAPLPATCSLGSFGAPR*GRLGCA
Trigger: AGCGCAGCCCAGGCGTCCTCAACGGGGAGCCCCAAA...GGAGCCCAGAGAGCATGTGGCAGGCAGTGGGGCCTCTTCATCAGCAGCCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR TCA 90 bp GGCAGGAGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGCGGCAGACCCAGATCTaGCTCAGCCCCGAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: GRSPEGPQCTTASRQRLQRQTQI*LSPEGA
Trigger: TGCACCCTCGGGGCTGAGTCAGATCTGGGTCTGCCG...CTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCTCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR TCA 90 bp AACAGGGCAGCCACCAGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCCCCGGCTCTGTGCTCTaGGTGCATGCGATGTGCCCG +
Preference number: 4 (lower is better)
Translates to: NRAATRYLCQQACYLPTAPGSVL*VHAMCP
Trigger: CGGGCACATCGCATGCACTCAGAGCACAGAGCCGGG...GGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR TCA 90 bp GCAGTACCTGCAGCAGCGCCAGCCACGCAGTCAGGCAGTTGGCCGGCACCCCCAGCTGCCCACTCTGGCTaGGTTCATGCTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: AVPAAAPATQSGSWPAPPAAHSG*VHASGP
Trigger: AGGCCCAGAAGCATGAACTCAGCCAGAGTGGGCAGC...TGGGGGTGCCGGCCAACTGCCTGACTGCGTGGCTGGCGCTGCTGCAGGTACTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR GCA 90 bp AGTCAGGCAGTTGGCCGGCACCCCCAGCGTGCACACCGCGCTGTACACCACGACTTGCCCTGCAGTACCTaGAGCAGCGCCAGCCACGCA +
Preference number: 4 (lower is better)
Translates to: SQAVGRHPQRAHRAVHHDLPCST*SSASHA
Trigger: TGCGTGGCTGGCGCTGCTGCAGGTACTGCAGGGCAA...GTCGTGGTGTACAGCGCGGTGTGCACGCTGGGGGTGCCGGCCAACTGCCTGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR GCA 90 bp GTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCCAGCCCCAGAGTGGCAGCGTaGCTGTGTACAGCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: VGCPMPSWALPQCWVTSSPRVAA*LCTAAR
Trigger: GCGAGCTGCTGTACACAGGCACGCTGCCACTCTGGG...GCTGGAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp CAGATGAGGGCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGTGTAGGCGGTCACCTTaGAGGCCAGCAGGCCTAGGG +
Preference number: 4 (lower is better)
Translates to: QMRAPAPLEVVGCPMPSWCRRSP*RPAGLG
Trigger: CCCTAGGCCTGCTGGCCTGCAAGGTGACCGCCTACA...CCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCCCTCATCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp AACAGGGCAGCCACCAGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCCCAGGACCCCCAACCTaGCATCCCCCTGCCACACAG +
Preference number: 4 (lower is better)
Translates to: NRAATRYLCQQACYLPTAPGPPT*HPPATQ
Trigger: CTGTGTGGCAGGGGGATGGCAGGTTGGGGGTCCTGG...GGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCGCCACCAGGTACCTCTaGCAGCAGGCGTGCTACCTG +
Preference number: 4 (lower is better)
Translates to: GGRLPYALLGAATVLGDLATRYL*QQACYL
Trigger: CAGGTAGCACGCCTGCTGGCAGAGGTACCTGGTGGC...GAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GCAGTACCTGCAGCAGCGCCAGCCACGCAGTCAGGCAGTTGGCCGGCACCCCCACCAGAGGGCCCACAATaGACCACCGCATCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: AVPAAAPATQSGSWPAPPPEGPQ*TTASRQ
Trigger: TTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGG...TGGGGGTGCCGGCCAACTGCCTGACTGCGTGGCTGGCGCTGCTGCAGGTACTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR GCA 90 bp GGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACTTGGAGGTGGTAGGCTaGCCTATGCCCTCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: GGGRLPYALLGAATVLGDLEVVG*PMPSWA
Trigger: CGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAA...GTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCGGCACCCCTTGCCTCTaGTGTGGCTGTGTCACACCT +
Preference number: 4 (lower is better)
Translates to: APLEVVGCPMPSWALPQCGTPCL*CGCVTP
Trigger: AGGTGTGACACAGCCACAGCAGAGGCAAGGGGTGCC...GCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp CCAACCCCAGATGAGGGCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCACTCAGCCCCGAGGGTaGAGGGAGCTGGCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: PTPDEGACPLGGGRLPYATQPRG*RELAFS
Trigger: GGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGT...GGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCCCTCATCTGGGGTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp CCAACCCCAGATGAGGGCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCGTTGTTGCAGGTCTTaGCGGAGAGGCCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: PTPDEGACPLGGGRLPYARCCRS*RRGPGR
Trigger: CCTCCCTGGGCCTCTCCGCCAAGACCTGCAACAACG...GGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCCCTCATCTGGGGTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCCAGCCCCCTGCCACACAGTaGGCTCAGCAGGACTCCTCA +
Preference number: 4 (lower is better)
Translates to: GRLPYALLGAATVLGDLQPPATQ*AQQDSS
Trigger: TGAGGAGTCCTGCTGAGCCCACTGTGTGGCAGGGGG...CTGGAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCCCCCCTGCCACACAGTaGGCTCAGCAGGACTCCTCA +
Preference number: 4 (lower is better)
Translates to: GGRLPYALLGAATVLGDLPPATQ*AQQDSS
Trigger: TGAGGAGTCCTGCTGAGCCCACTGTGTGGCAGGGGG...GAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp CCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGGGACATGGGCACTGTaGCTGGTGGGCTCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: PLEVVGCPMPSWALPQCWGTWAL*LVGSVH
Trigger: GTGCACTGAGCCCACCAGCCACAGTGCCCATGTCCC...CCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp CCAACCCCAGATGAGGGCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCGGGACATGGGCACTGTaGCTGGTGGGCTCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: PTPDEGACPLGGGRLPYAGTWAL*LVGSVH
Trigger: GTGCACTGAGCCCACCAGCCACAGTGCCCATGTCCC...GGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCCCTCATCTGGGGTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp AGGCAGGAGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGGGCTCCCGGAAGCCTaGAGGTGTCGCTCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: RQEPRGPTMHHRIQATLAGLPEA*RCRSSP
Trigger: AGGGGAGGAGCGACACCTCCAGGCTTCCGGGAGCCC...TGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCTCCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp AGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCAAGGGAGCCAGCCAGTGCCCTATGCCCTCCTaGGCGCTGCCACAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RYLCQQACYLPTAKGASQCPMPS*ALPQCW
Trigger: CCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCA...CTGGCTGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GCACGTTGCCCTGCAGTACCTGCAGCAGCGCCAGCCACGCAGTCAGGCAGTTGGTGCCCTATGCCCTCCTaGGCGCTGCCACAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ARCPAVPAAAPATQSGSWCPMPS*ALPQCW
Trigger: CCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCA...CCAACTGCCTGACTGCGTGGCTGGCGCTGCTGCAGGTACTGCAGGGCAACGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR CCA 90 bp CCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGCTGGGCGTGGACATTTaGGGCTCCCCGTTGAGGACG +
Preference number: 4 (lower is better)
Translates to: PLEVVGCPMPSWALPQCWLGVDI*GSPLRT
Trigger: CGTCCTCAACGGGGAGCCCCAAATGTCCACGCCCAG...CCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR TCA 90 bp GCAGTACCTGCAGCAGCGCCAGCCACGCAGTCAGGCAGTTGGCCGGCACCCCCAAGCAGACTAGGAAGATaGCAACCACCGCGATGGCCG +
Preference number: 4 (lower is better)
Translates to: AVPAAAPATQSGSWPAPPSRLGR*QPPRWP
Trigger: CGGCCATCGCGGTGGTTGTCATCTTCCTAGTCTGCT...TGGGGGTGCCGGCCAACTGCCTGACTGCGTGGCTGGCGCTGCTGCAGGTACTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR TCA 90 bp GCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCAAAAAGGCAGCGGCTTTaGCGAGGAGAACCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: APAPLEVVGCPMPSWALPKRQRL*RGEPGG
Trigger: ACCACCTGGTTCTCCTCGTCAAAGCCGCTGCCTTTT...TGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp AGGCAGGAGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCACACTCGCTCCGCATTTaGTCCCAGCCCCCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: RQEPRGPTMHHRIQATLAHSLRI*SQPPGL
Trigger: GAGGCCTGGGGGCTGGGAGCAAATGCGGAGCGAGTG...TGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCTCCTGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp CAGATGAGGGCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGCAGCAGCTCGCAGAGTaGCAGGCAGAGCAGGTAGAC +
Preference number: 4 (lower is better)
Translates to: QMRAPAPLEVVGCPMPSWQQLAE*QAEQVD
Trigger: GTCTACCTGCTCTGCCTGGCACTCTGCGAGCTGCTG...CCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCCCTCATCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCATGTAGGCGGTCACCTTaGAGGCCAGCAGGCCTAGGG +
Preference number: 4 (lower is better)
Translates to: DSAPRVQGAGFLRQTSRPCRRSP*RPAGLG
Trigger: CCCTAGGCCTGCTGGCCTGCAAGGTGACCGCCTACA...TGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp CCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGAAGGTGTAGTGGTCTaGAAGGGCCACGGGCGACTG +
Preference number: 4 (lower is better)
Translates to: PLEVVGCPMPSWALPQCWEGVVV*KGHGRL
Trigger: CAGTCGCCCGTGGCCCTTGCAGACCACTACACCTTC...CCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp AGTCAGGCAGTTGGCCGGCACCCCCAGCGTGCACACCGCGCTGTACACCACGACGAAGGTGTAGTGGTCTaGAAGGGCCACGGGCGACTG +
Preference number: 4 (lower is better)
Translates to: SQAVGRHPQRAHRAVHHDEGVVV*KGHGRL
Trigger: CAGTCGCCCGTGGCCCTTGCAGACCACTACACCTTC...GTCGTGGTGTACAGCGCGGTGTGCACGCTGGGGGTGCCGGCCAACTGCCTGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR GCA 90 bp GGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCAACCTGCCATCCCCCTaGCACACAGTGGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GGRLPYALLGAATVLGDLNLPSP*HTVGSA
Trigger: TGCTGAGCCCACTGTGTGGCAGGGGGATGGCAGGTT...GAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCGCACAGGAACCACATTaGTGGCCCCAGGACCCCCAA +
Preference number: 4 (lower is better)
Translates to: GGRLPYALLGAATVLGDLAQEPH*WPQDPQ
Trigger: TTGGGGGTCCTGGGGCCAGCAATGTGGTTCCTGTGC...GAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp AGTCAGGCAGTTGGCCGGCACCCCCAGCGTGCACACCGCGCTGTACACCACGACGCACAGGAACCACATTaGTGGCCCCAGGACCCCCAA +
Preference number: 4 (lower is better)
Translates to: SQAVGRHPQRAHRAVHHDAQEPH*WPQDPQ
Trigger: TTGGGGGTCCTGGGGCCAGCAATGTGGTTCCTGTGC...GTCGTGGTGTACAGCGCGGTGTGCACGCTGGGGGTGCCGGCCAACTGCCTGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR GCA 90 bp CCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGCTCCTCCCCTTGGCATaGAGCCACCTTCCATGTGGG +
Preference number: 4 (lower is better)
Translates to: PLEVVGCPMPSWALPQCWLLPLA*SHLPCG
Trigger: CCCACATGGAAGGTGGCTGCATGCCAAGGGGAGGAG...CCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp ACCAGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCAAGGGAGCCAGCAGAGGCCCCACTGCCTaGCACATGCTCTCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: TRYLCQQACYLPTAKGASRGPTA*HMLSGL
Trigger: GAGCCCAGAGAGCATGTGGCAGGCAGTGGGGCCTCT...GCTGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCATGAAGAGGCCCCACTaGCTGCCACATGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: APLEVVGCPMPSWALPQCMKRPH*LPHALW
Trigger: CCAGAGAGCATGTGGCAGGCAGTGGGGCCTCTTCAT...GCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GCACGTTGCCCTGCAGTACCTGCAGCAGCGCCAGCCACGCAGTCAGGCAGTTGGAGCAGGCGTGCTACCTaGCCACAGCCAAGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: ARCPAVPAAAPATQSGSWSRRAT*PQPREP
Trigger: TGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCT...CCAACTGCCTGACTGCGTGGCTGGCGCTGCTGCAGGTACTGCAGGGCAACGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR GCA 90 bp GGTGCTGCGTCTGCCCGGCTCTGTGCTCTGAGTGCATGCGATGTGCCCGAGGTGGCCACCAGGTACCTCTaGCAGCAGGCGTGCTACCTG +
Preference number: 4 (lower is better)
Translates to: GAASARLCALSACDVPEVATRYL*QQACYL
Trigger: CAGGTAGCACGCCTGCTGGCAGAGGTACCTGGTGGC...CACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCAGCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp ACCAGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCAAGGGAGCCAGCGCCACCAGGTACCTCTaGCAGCAGGCGTGCTACCTG +
Preference number: 4 (lower is better)
Translates to: TRYLCQQACYLPTAKGASATRYL*QQACYL
Trigger: CAGGTAGCACGCCTGCTGGCAGAGGTACCTGGTGGC...GCTGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCCCAGAGGGCCCACAATaGACCACCGCATCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: GGRLPYALLGAATVLGDLPEGPQ*TTASRQ
Trigger: TTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGG...GAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GGCAGGAGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGTGGGCGCTGCCACAGTaGTGGGTGACCTCCAGCATG +
Preference number: 4 (lower is better)
Translates to: GRSPEGPQCTTASRQRLQWALPQ*WVTSSM
Trigger: CATGCTGGAGGTCACCCAGCACTGTGGCAGCGCCCA...CTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCTCCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GCACGTTGCCCTGCAGTACCTGCAGCAGCGCCAGCCACGCAGTCAGGCAGTTGGTGGGCGCTGCCACAGTaGTGGGTGACCTCCAGCATG +
Preference number: 4 (lower is better)
Translates to: ARCPAVPAAAPATQSGSWWALPQ*WVTSSM
Trigger: CATGCTGGAGGTCACCCAGCACTGTGGCAGCGCCCA...CCAACTGCCTGACTGCGTGGCTGGCGCTGCTGCAGGTACTGCAGGGCAACGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR GCA 90 bp CCAACCCCAGATGAGGGCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCACTCCTGGCACCCCTTaGCTCTGCTGTGGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: PTPDEGACPLGGGRLPYATPGTP*LCCGCV
Trigger: GACACAGCCACAGCAGAGGCAAGGGGTGCCAGGAGT...GGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCCCTCATCTGGGGTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp GGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCACTCCTGGCACCCCTTaGCTCTGCTGTGGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: GGRLPYALLGAATVLGDLTPGTP*LCCGCV
Trigger: GACACAGCCACAGCAGAGGCAAGGGGTGCCAGGAGT...GAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp AGGCAGGAGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGCATCTCCCCGAGGATaGCGCTGGGGACTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: RQEPRGPTMHHRIQATLAASPRG*RWGLLA
Trigger: TGCCAGGAGTCCCCAGCGGCATCCTCGGGGAGATGC...TGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCTCCTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp GGTGCTGCGTCTGCCCGGCTCTGTGCTCTGAGTGCATGCGATGTGCCCGAGGTGTGCAGGTGCTGCGTCTaGCCGGCTCTGTGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: GAASARLCALSACDVPEVCRCCV*PALCSE
Trigger: CTCAGAGCACAGAGCCGGGCAGACGCAGCACCTGCA...CACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCAGCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp AGGCAGGAGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCATCCCCATGCAGGTGCTaGGTCTGCCCGGCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: RQEPRGPTMHHRIQATLASPCRC*VCPALC
Trigger: GCACAGAGCCGGGCAGACGCAGCACCTGCATGGGGA...TGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCTCCTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp TGCTGGGTGACCTCCAGCATGGTGCTCACTGACATTCTGAGGCAGGAGCCCAGAAGCCAGGGCCCCGCCTaGGTGGCTAGCCTCGCACCC +
Preference number: 4 (lower is better)
Translates to: CWVTSSMVLTDILRQEPRSQGPA*VASLAP
Trigger: GGGTGCGAGGCTAGCCACGCAGGCGGGGCCCTGGCT...TCTGGGCTCCTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539291.6
CDS-3UTR CCA 90 bp TCTGACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCCACGGGGCAGTGGTaGTCACTGGGGTGGCGTTTC +
Preference number: 4 (lower is better)
Translates to: SDSAPRVQGAGFLRQTSRPTGQW*SLGWRF
Trigger: GAAACGCCACCCCAGTGACCACCACTGCCCCGTGGG...CCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp AACAGGGCAGCCACCAGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCCGTTGTTGCAGGTCTTaGCGGAGAGGCCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: NRAATRYLCQQACYLPTARCCRS*RRGPGR
Trigger: CCTCCCTGGGCCTCTCCGCCAAGACCTGCAACAACG...GGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp AGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCAAGGGAGCCAGCCAGCGTTGTTGCAGGTCTTaGCGGAGAGGCCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: RYLCQQACYLPTAKGASQRCCRS*RRGPGR
Trigger: CCTCCCTGGGCCTCTCCGCCAAGACCTGCAACAACG...CTGGCTGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCATTCACCTTGGCCTTCTaGGCAGCGCTTAAGCCCATG +
Preference number: 4 (lower is better)
Translates to: APAPLEVVGCPMPSWALPFTLAF*AALKPM
Trigger: CATGGGCTTAAGCGCTGCCCAGAAGGCCAAGGTGAA...TGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCCAGTCGGTGTCCCTGCTGTaGGTGAGCCTGGTGACGTCT +
Preference number: 4 (lower is better)
Translates to: GRLPYALLGAATVLGDLQSVSLL*VSLVTS
Trigger: AGACGTCACCAGGCTCACCCACAGCAGGGACACCGA...CTGGAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp ACCAGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCAAGGGAGCCAGCCCCCCTGCCACACAGTaGGCTCAGCAGGACTCCTCA +
Preference number: 4 (lower is better)
Translates to: TRYLCQQACYLPTAKGASPPATQ*AQQDSS
Trigger: TGAGGAGTCCTGCTGAGCCCACTGTGTGGCAGGGGG...GCTGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCTGGT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp CCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCAACTGCTGCTTCCAGAGGGGACATaGGCACTGTGGCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: PRGCRELAFSARQAGQLLLPEGT*ALWLVG
Trigger: GCCCACCAGCCACAGTGCCCATGTCCCCTCTGGAAG...CAGCAGTTGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp TGCGTCTGCCCGGCTCTGTGCTCTGAGTGCATGCGATGTGCCCGAGGTGTCGGGCTTCCAGAGGGGACATaGGCACTGTGGCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: CVCPALCSECMRCARGVGLPEGT*ALWLVG
Trigger: GCCCACCAGCCACAGTGCCCATGTCCCCTCTGGAAG...CCCGACACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp CCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCAACTGCTGCTGCCACATGCTCTCTaGGCTCCCGGAAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: PRGCRELAFSARQAGQLLLPHAL*APGSLE
Trigger: CTCCAGGCTTCCGGGAGCCCAGAGAGCATGTGGCAG...CAGCAGTTGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp TGCGTCTGCCCGGCTCTGTGCTCTGAGTGCATGCGATGTGCCCGAGGTGTCGGGCTGGGCGTGGACATTTaGGGCTCCCCGTTGAGGACG +
Preference number: 4 (lower is better)
Translates to: CVCPALCSECMRCARGVGLGVDI*GSPLRT
Trigger: CGTCCTCAACGGGGAGCCCCAAATGTCCACGCCCAG...CCCGACACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp GGTGCTGCGTCTGCCCGGCTCTGTGCTCTGAGTGCATGCGATGTGCCCGAGGTGGACAAAACGAGAGCGTaGCTCAGCCCCACGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GAASARLCALSACDVPEVDKTRA*LSPTAL
Trigger: CAGGGCCGTGGGGCTGAGCCACGCTCTCGTTTTGTC...CACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCAGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR CAA 72 bp ACTGTTGTTCTGGGCGTGGACATTTGGGGCTCCCCGTaGAGGACGCCTGGGCTGCGCTCTGGGAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: TVVLGVDIWGSP*RTPGLRSGSQQ
Trigger: CTGCTGGCTCCCAGAGCGCAGCCCAGGCGTCCTCAACGGGGAGCCCCAAATGTCCACGCCCAGAACAACAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR TCA 90 bp GGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCGGTTGCGGATATAGATaGCCCAGAGTGGCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: GGRLPYALLGAATVLGDLGCGYR*PRVAAC
Trigger: GCACGCTGCCACTCTGGGTCATCTATATCCGCAACC...GAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR TCA 90 bp ACCAGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCAAGGGAGCCAGCACCAGGGCATCAGTGTaGCCTGGTCTAGGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: TRYLCQQACYLPTAKGASTRASV*PGLGKA
Trigger: GGCCTTGCCTAGACCAGGTCACACTGATGCCCTGGT...GCTGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR TCA 90 bp GCACGTTGCCCTGCAGTACCTGCAGCAGCGCCAGCCACGCAGTCAGGCAGTTGGGGGTGTGCAGTGGTGTaGCTTCCCCAAGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: ARCPAVPAAAPATQSGSWGCAVV*LPQALP
Trigger: TGGCAGAGCTTGGGGAAGTCACACCACTGCACACCC...CCAACTGCCTGACTGCGTGGCTGGCGCTGCTGCAGGTACTGCAGGGCAACGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR GCA 90 bp CCAACCCCAGATGAGGGCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCTCCACTTTGTCTCTGTaGGCTGGGCTCCCCTGTCAC +
Preference number: 4 (lower is better)
Translates to: PTPDEGACPLGGGRLPYASTLSL*AGLPCH
Trigger: GTGACAGGGGAGCCCAGCGCACAGAGACAAAGTGGA...GGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCCCTCATCTGGGGTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp CCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGCGAAGGACACGTTGTTaGAGGTCTTGGCGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: PLEVVGCPMPSWALPQCWRRTRC*RSWRRG
Trigger: GCCTCTCCGCCAAGACCTGCAACAACGTGTCCTTCG...CCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp AGGCAGGCTGCTGATGAAGAGGCCCCACTGCCTGCCACATGCTCTCTGGGCTCCTTGCCCTGCAGTACCTaGAGCAGCGCCAGCCACGCA +
Preference number: 4 (lower is better)
Translates to: RQAADEEAPLPATCSLGSLPCST*SSASHA
Trigger: TGCGTGGCTGGCGCTGCTGCAGGTACTGCAGGGCAA...GGAGCCCAGAGAGCATGTGGCAGGCAGTGGGGCCTCTTCATCAGCAGCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCAAGACGGCCAGCACGTTaGCCTGCAGTACCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: DSAPRVQGAGFLRQTSRPRRPAR*PAVPAA
Trigger: TGCTGCAGGTACTGCAGGGCAACGTGCTGGCCGTCT...TGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp TGCGTCTGCCCGGCTCTGTGCTCTGAGTGCATGCGATGTGCCCGAGGTGTCGGGCAGCAGCTCGCAGAGTaGCAGGCAGAGCAGGTAGAC +
Preference number: 4 (lower is better)
Translates to: CVCPALCSECMRCARGVGQQLAE*QAEQVD
Trigger: GTCTACCTGCTCTGCCTGGCACTCTGCGAGCTGCTG...CCCGACACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp AGGCAGGAGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCACCCAGAGTGGCAGCGTaGCTGTGTACAGCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: RQEPRGPTMHHRIQATLAPRVAA*LCTAAR
Trigger: GCGAGCTGCTGTACACAGGCACGCTGCCACTCTGGG...TGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCTCCTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp CAGATGAGGGCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGAGCGGTCGCAGGAGATaGAGCACAGGAAGAGGATGC +
Preference number: 4 (lower is better)
Translates to: QMRAPAPLEVVGCPMPSWSGRRR*STGRGC
Trigger: GCATCCTCTTCCTGTGCTGCATCTCCTGCGACCGCT...CCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCCCTCATCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp CCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGAGCGGTCGCAGGAGATaGAGCACAGGAAGAGGATGC +
Preference number: 4 (lower is better)
Translates to: PLEVVGCPMPSWALPQCWSGRRR*STGRGC
Trigger: GCATCCTCTTCCTGTGCTGCATCTCCTGCGACCGCT...CCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GGCAGGAGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGACCGCGATGGCCGAGTaGTTCACCTTGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GRSPEGPQCTTASRQRLQTAMAE*FTLAFW
Trigger: CCAGAAGGCCAAGGTGAAGCACTCGGCCATCGCGGT...CTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCTCCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCAGAAGGTGTAGTGGTCTaGAAGGGCCACGGGCGACTG +
Preference number: 4 (lower is better)
Translates to: DSAPRVQGAGFLRQTSRPEGVVV*KGHGRL
Trigger: CAGTCGCCCGTGGCCCTTGCAGACCACTACACCTTC...TGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp GACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCAAACCTGCCATCCCCCTaGCACACAGTGGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: DSAPRVQGAGFLRQTSRPNLPSP*HTVGSA
Trigger: TGCTGAGCCCACTGTGTGGCAGGGGGATGGCAGGTT...TGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp AGGCAGGCTGCTGATGAAGAGGCCCCACTGCCTGCCACATGCTCTCTGGGCTCCCTCTGCCAGCAGGCGTaGTACCTGCCCACAGCCAAG +
Preference number: 4 (lower is better)
Translates to: RQAADEEAPLPATCSLGSLCQQA*YLPTAK
Trigger: CTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAG...GGAGCCCAGAGAGCATGTGGCAGGCAGTGGGGCCTCTTCATCAGCAGCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp TCTGACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGACTCAGCCCCGAGGGTaGAGGGAGCTGGCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: SDSAPRVQGAGFLRQTSRTQPRG*RELAFS
Trigger: GGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGT...CCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp CCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGCTCTGTGCTCTGAGTaGATGCGATGTGCCCGAGGT +
Preference number: 4 (lower is better)
Translates to: PLEVVGCPMPSWALPQCWALCSE*MRCARG
Trigger: ACCTCGGGCACATCGCATGCACTCAGAGCACAGAGC...CCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp AAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCCAGCAGGGGCTCCCCATGCAGGTaGTGCGTCTGCCCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: KSSPLMRTGQPPGTSASRGSPCR*CVCPAL
Trigger: CAGAGCCGGGCAGACGCAGCACCTGCATGGGGAGCC...CCTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp GAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAGCACTGGGCTCCCCATaGAGGTGCTGCGTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: EGPQCTTASRQRLQKCSAALGSP*RCCVCP
Trigger: CGGGCAGACGCAGCACCTGCATGGGGAGCCCAGTGC...TGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp CCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCAACTGCTGTGTCACCTCCCCACGTaGGTGGGCATCTCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: PRGCRELAFSARQAGQLLCHLPT*VGISAC
Trigger: ACACGCAGAGATGCCCACCCACGTGGGGAGGTGACA...CAGCAGTTGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000551869.1
CDS-3UTR CCA 90 bp TGCGTCTGCCCGGCTCTGTGCTCTGAGTGCATGCGATGTGCCCGAGGTGTCGGGTGTCACCTCCCCACGTaGGTGGGCATCTCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: CVCPALCSECMRCARGVGCHLPT*VGISAC
Trigger: ACACGCAGAGATGCCCACCCACGTGGGGAGGTGACA...CCCGACACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000551869.1
CDS-3UTR CCA 90 bp AGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCAAGGGAGCCAGCCAGTTTGTCTCTGTGCGCTaGGCTCCCCTGTCACCTCCC +
Preference number: 4 (lower is better)
Translates to: RYLCQQACYLPTAKGASQFVSVR*APLSPP
Trigger: GGGAGGTGACAGGGGAGCCCAGCGCACAGAGACAAA...CTGGCTGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp AGTGCATGCGATGTGCCCGAGGTGTCGGGGCAGGGAGGAGGATTGATCTCGATGAGGCCCACGGGGCAGTaGTGGTCACTGGGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: SACDVPEVSGQGGGLISMRPTGQ*WSLGWR
Trigger: ACGCCACCCCAGTGACCACCACTGCCCCGTGGGCCT...CATCGAGATCAATCCTCCTCCCTGCCCCGACACCTCGGGCACATCGCATGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp AAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCCAGCAGGACGCAGTCAGGCAGTTaGCCGGCACCCCCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: KSSPLMRTGQPPGTSASRTQSGS*PAPPAC
Trigger: GCACGCTGGGGGTGCCGGCCAACTGCCTGACTGCGT...CCTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp CCAACCCCAGATGAGGGCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCACGAGGAGAACCAGGTaGTACGGGGCGAAGCAGACT +
Preference number: 4 (lower is better)
Translates to: PTPDEGACPLGGGRLPYATRRTR*YGAKQT
Trigger: AGTCTGCTTCGCCCCGTACCACCTGGTTCTCCTCGT...GGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCCCTCATCTGGGGTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GGTGCTGCGTCTGCCCGGCTCTGTGCTCTGAGTGCATGCGATGTGCCCGAGGTGGTGGGTGCACGGGCCTaGAGAAGGTGTAGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: GAASARLCALSACDVPEVVGARA*RRCSGL
Trigger: CAGACCACTACACCTTCTCCAGGCCCGTGCACCCAC...CACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCAGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp AACAGGGCAGCCACCAGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCCAGGAACCACATTGCTaGCCCCAGGACCCCCAACCT +
Preference number: 4 (lower is better)
Translates to: NRAATRYLCQQACYLPTAQEPHC*PQDPQP
Trigger: AGGTTGGGGGTCCTGGGGCCAGCAATGTGGTTCCTG...GGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp AGGCAGGCTGCTGATGAAGAGGCCCCACTGCCTGCCACATGCTCTCTGGGCTCCGGGACATGGGCACTGTaGCTGGTGGGCTCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: RQAADEEAPLPATCSLGSGTWAL*LVGSVH
Trigger: GTGCACTGAGCCCACCAGCCACAGTGCCCATGTCCC...GGAGCCCAGAGAGCATGTGGCAGGCAGTGGGGCCTCTTCATCAGCAGCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp AGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCAAGGGAGCCAGCCAGCAGCCACCTTCCATGTaGGAAAGCCTGGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: RYLCQQACYLPTAKGASQQPPSM*ESLGPV
Trigger: CACTGGCCCCAGGCTTTCCCACATGGAAGGTGGCTG...CTGGCTGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCACTGGGAGCCAGCAGCTaGCCACCCTGCCCCACGGTT +
Preference number: 4 (lower is better)
Translates to: EGPQCTTASRQRLQKCSALGASS*PPCPTV
Trigger: AACCGTGGGGCAGGGTGGCCAGCTGCTGGCTCCCAG...TGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp AGTGCATGCGATGTGCCCGAGGTGTCGGGGCAGGGAGGAGGATTGATCTCGATGCCCCGAGGATGCCGCTaGGGACTCCTGGCACCCCTT +
Preference number: 4 (lower is better)
Translates to: SACDVPEVSGQGGGLISMPRGCR*GLLAPL
Trigger: AAGGGGTGCCAGGAGTCCCCAGCGGCATCCTCGGGG...CATCGAGATCAATCCTCCTCCCTGCCCCGACACCTCGGGCACATCGCATGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp GCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCGATGGCTGTTTTGGCTaGGTGTGGTGGTGCACACCT +
Preference number: 4 (lower is better)
Translates to: APLEVVGCPMPSWALPQCDGCFG*VWWCTP
Trigger: AGGTGTGCACCACCACACCCAGCCAAAACAGCCATC...GCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR CAA 72 bp ACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACATTaGGGGCTCCCCGTTGAGGACGCCTGGGCTGCGCTC +
Preference number: 4 (lower is better)
Translates to: TCPANCCSGRGH*GLPVEDAWAAL
Trigger: GAGCGCAGCCCAGGCGTCCTCAACGGGGAGCCCCAAATGTCCACGCCCAGAACAACAGTTGGCAGGACAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR TCA 90 bp GTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCCAGCTGTGCCCTTCCATCTTaGGCAATCCTGCACGTGTGG +
Preference number: 4 (lower is better)
Translates to: VGCPMPSWALPQCWVTSSCALPS*AILHVW
Trigger: CCACACGTGCAGGATTGCTCAAGATGGAAGGGCACA...GCTGGAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000539291.6
CDS-3UTR TCA 90 bp AGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCAGATGCAGGCGGAGATaGGGATGGCGGTCCTCCGGC +
Preference number: 4 (lower is better)
Translates to: SPEGPQCTTASRQRLQKCRCRRR*GWRSSG
Trigger: GCCGGAGGACCGCCATCCTCATCTCCGCCTGCATCT...GCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR TCA 90 bp GGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCCAGTGGCAAAGCCAACGGTaGACCTGGCGTAGTAGTACC +
Preference number: 4 (lower is better)
Translates to: GRLPYALLGAATVLGDLQWQSQR*TWRSST
Trigger: GGTACTACTACGCCAGGTTCACCGTTGGCTTTGCCA...CTGGAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR TCA 90 bp GGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCTGGCAAAGCCAACGGTaGACCTGGCGTAGTAGTACC +
Preference number: 4 (lower is better)
Translates to: GGRLPYALLGAATVLGDLWQSQR*TWRSST
Trigger: GGTACTACTACGCCAGGTTCACCGTTGGCTTTGCCA...GAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR TCA 90 bp ACCAGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCAAGGGAGCCAGCAGCAGACTAGGAAGATaGCAACCACCGCGATGGCCG +
Preference number: 4 (lower is better)
Translates to: TRYLCQQACYLPTAKGASSRLGR*QPPRWP
Trigger: CGGCCATCGCGGTGGTTGTCATCTTCCTAGTCTGCT...GCTGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR TCA 90 bp TGCGTCTGCCCGGCTCTGTGCTCTGAGTGCATGCGATGTGCCCGAGGTGTCGGGAGCAGACTAGGAAGATaGCAACCACCGCGATGGCCG +
Preference number: 4 (lower is better)
Translates to: CVCPALCSECMRCARGVGSRLGR*QPPRWP
Trigger: CGGCCATCGCGGTGGTTGTCATCTTCCTAGTCTGCT...CCCGACACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR TCA 90 bp AGGCAGGCTGCTGATGAAGAGGCCCCACTGCCTGCCACATGCTCTCTGGGCTCCTGCCACAGTGCTGGGTaGCCTCCAGCATGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: RQAADEEAPLPATCSLGSCHSAG*PPAWCS
Trigger: TGAGCACCATGCTGGAGGTCACCCAGCACTGTGGCA...GGAGCCCAGAGAGCATGTGGCAGGCAGTGGGGCCTCTTCATCAGCAGCCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR TCA 90 bp AAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCCAGCAGTTTGGGGCTCCCCGTTaGGGACGCCTGGGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: KVIATDANRAATRYLCQQFGAPR*GRLGCA
Trigger: AGCGCAGCCCAGGCGTCCTCAACGGGGAGCCCCAAA...CTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR TCA 90 bp AGGCAGGCTGCTGATGAAGAGGCCCCACTGCCTGCCACATGCTCTCTGGGCTCCACCAGGGCATCAGTGTaGCCTGGTCTAGGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: RQAADEEAPLPATCSLGSTRASV*PGLGKA
Trigger: GGCCTTGCCTAGACCAGGTCACACTGATGCCCTGGT...GGAGCCCAGAGAGCATGTGGCAGGCAGTGGGGCCTCTTCATCAGCAGCCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp GACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCATCCACTTTGTCTCTGTaGGCTGGGCTCCCCTGTCAC +
Preference number: 4 (lower is better)
Translates to: DSAPRVQGAGFLRQTSRPSTLSL*AGLPCH
Trigger: GTGACAGGGGAGCCCAGCGCACAGAGACAAAGTGGA...TGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000551869.1
CDS-3UTR GCA 90 bp TGCGTCTGCCCGGCTCTGTGCTCTGAGTGCATGCGATGTGCCCGAGGTGTCGGGCGAAGGACACGTTGTTaGAGGTCTTGGCGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: CVCPALCSECMRCARGVGRRTRC*RSWRRG
Trigger: GCCTCTCCGCCAAGACCTGCAACAACGTGTCCTTCG...CCCGACACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp GGCAGGAGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGCGAAGGACACGTTGTTaGAGGTCTTGGCGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: GRSPEGPQCTTASRQRLQRRTRC*RSWRRG
Trigger: GCCTCTCCGCCAAGACCTGCAACAACGTGTCCTTCG...CTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCTCCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp TGCTGGGTGACCTCCAGCATGGTGCTCACTGACATTCTGAGGCAGGAGCCCAGACCGGCACCCCCAGCGTaGACACCGCGCTGTACACCA +
Preference number: 4 (lower is better)
Translates to: CWVTSSMVLTDILRQEPRPAPPA*TPRCTP
Trigger: TGGTGTACAGCGCGGTGTGCACGCTGGGGGTGCCGG...TCTGGGCTCCTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp AGGCAGGAGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAACCGCGATGGCCGAGTaGTTCACCTTGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: RQEPRGPTMHHRIQATLATAMAE*FTLAFW
Trigger: CCAGAAGGCCAAGGTGAAGCACTCGGCCATCGCGGT...TGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCTCCTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp AAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCCAGCAGAGGGCCACGGGCGACTaGAGCTCCTCGGTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: KVIATDANRAATRYLCQQRATGD*SSSVSL
Trigger: CAGGGACACCGAGGAGCTGCAGTCGCCCGTGGCCCT...CTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp TCTGACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGAACCTGCCATCCCCCTaGCACACAGTGGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SDSAPRVQGAGFLRQTSRNLPSP*HTVGSA
Trigger: TGCTGAGCCCACTGTGTGGCAGGGGGATGGCAGGTT...CCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp AGGCAGGAGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGCACAGGAACCACATTaGTGGCCCCAGGACCCCCAA +
Preference number: 4 (lower is better)
Translates to: RQEPRGPTMHHRIQATLAAQEPH*WPQDPQ
Trigger: TTGGGGGTCCTGGGGCCAGCAATGTGGTTCCTGTGC...TGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCTCCTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp ACCAGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCAAGGGAGCCAGCTGTGCTCTGAGTGCATaGGATGTGCCCGAGGTGTCG +
Preference number: 4 (lower is better)
Translates to: TRYLCQQACYLPTAKGASCALSA*DVPEVS
Trigger: CGACACCTCGGGCACATCGCATGCACTCAGAGCACA...GCTGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp AGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCAAGGGAGCCAGCCAGGTCTGCCCGGCTCTGTaGTCTGAGTGCATGCGATGT +
Preference number: 4 (lower is better)
Translates to: RYLCQQACYLPTAKGASQVCPAL*SECMRC
Trigger: ACATCGCATGCACTCAGAGCACAGAGCCGGGCAGAC...CTGGCTGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp TGCGTCTGCCCGGCTCTGTGCTCTGAGTGCATGCGATGTGCCCGAGGTGTCGGGGTCTGCCCGGCTCTGTaGTCTGAGTGCATGCGATGT +
Preference number: 4 (lower is better)
Translates to: CVCPALCSECMRCARGVGVCPAL*SECMRC
Trigger: ACATCGCATGCACTCAGAGCACAGAGCCGGGCAGAC...CCCGACACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp AGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCCCATGCAGGTGCTaGGTCTGCCCGGCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: SPEGPQCTTASRQRLQKCSPCRC*VCPALC
Trigger: GCACAGAGCCGGGCAGACGCAGCACCTGCATGGGGA...GCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp AGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTGTTCTCCACGGTGGTaGCGCTGGCCCACCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SPEGPQCTTASRQRLQKCCSPRW*RWPTFP
Trigger: GGGGAAGGTGGGCCAGCGCCACCACCGTGGAGAACA...GCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000539291.6
CDS-3UTR CCA 90 bp ACCAGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCAAGGGAGCCAGCCCGAGTGCTTCACCTTaGCCTTCTGGGCAGCGCTTA +
Preference number: 4 (lower is better)
Translates to: TRYLCQQACYLPTAKGASPSASP*PSGQRL
Trigger: TAAGCGCTGCCCAGAAGGCCAAGGTGAAGCACTCGG...GCTGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp AACAGGGCAGCCACCAGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCCCTCCAAGCCGCACATaGCGTTCCTGTCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: NRAATRYLCQQACYLPTAPPSRT*RSCLLC
Trigger: ACAGAGGAGACAGGAACGCCATGTGCGGCTTGGAGG...GGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GCACGTTGCCCTGCAGTACCTGCAGCAGCGCCAGCCACGCAGTCAGGCAGTTGGCCACGCCGTTCACCGTaGACAGGCACAGAAACACCA +
Preference number: 4 (lower is better)
Translates to: ARCPAVPAAAPATQSGSWPRRSP*TGTETP
Trigger: TGGTGTTTCTGTGCCTGTCCACGGTGAACGGCGTGG...CCAACTGCCTGACTGCGTGGCTGGCGCTGCTGCAGGTACTGCAGGGCAACGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR CCA 90 bp GGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCATTCTGGACACTTCTTaGCGGGAATGGTCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: GGRLPYALLGAATVLGDLILDTS*REWSVA
Trigger: GGCCACGGACCATTCCCGCCAAGAAGTGTCCAGAAT...GAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp AGGCAGGAGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCATCGGTGTCCCTGCTGTaGGTGAGCCTGGTGACGTCT +
Preference number: 4 (lower is better)
Translates to: RQEPRGPTMHHRIQATLASVSLL*VSLVTS
Trigger: AGACGTCACCAGGCTCACCCACAGCAGGGACACCGA...TGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCTCCTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp TCTGACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCAGGAACCACATTGCTaGCCCCAGGACCCCCAACCT +
Preference number: 4 (lower is better)
Translates to: SDSAPRVQGAGFLRQTSRQEPHC*PQDPQP
Trigger: AGGTTGGGGGTCCTGGGGCCAGCAATGTGGTTCCTG...CCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp AAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCCAGCAGGGGCTCCCGGAAGCCTaGAGGTGTCGCTCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: KVIATDANRAATRYLCQQGLPEA*RCRSSP
Trigger: AGGGGAGGAGCGACACCTCCAGGCTTCCGGGAGCCC...CTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp CTGCCACAGTGCTGGGTGACCTCCAGCATGGTGCTCACTGACATTCTGAGGCAGCTGGGAGCCAGCAGCTaGCCACCCTGCCCCACGGTT +
Preference number: 4 (lower is better)
Translates to: LPQCWVTSSMVLTDILRQLGASS*PPCPTV
Trigger: AACCGTGGGGCAGGGTGGCCAGCTGCTGGCTCCCAG...CTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCACTGTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp AGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCAAGGGAGCCAGCCAGCTGTTGTTCTGGGCGTaGACATTTGGGGCTCCCCGT +
Preference number: 4 (lower is better)
Translates to: RYLCQQACYLPTAKGASQLLFWA*TFGAPR
Trigger: ACGGGGAGCCCCAAATGTCCACGCCCAGAACAACAG...CTGGCTGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp TCTGCTGTGGCTGTGTCACACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACACCTGCGCGGCCTCCCTaGAAGCCCCTGTGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: SAVAVSHLSCQLLFWAWTPARPP*KPLCCA
Trigger: GGCACAGCACAGGGGCTTCCAGGGAGGCCGCGCAGG...TGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACAGCCACAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp ACCAGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCAAGGGAGCCAGCGGAGGATGGCTGTTTTaGCTGGGTGTGGTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: TRYLCQQACYLPTAKGASGGWLF*LGVVVH
Trigger: GTGCACCACCACACCCAGCCAAAACAGCCATCCTCC...GCTGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp AGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCAAGGGAGCCAGCCAGACGCAGGGTGTGCAGTaGTGTGACTTCCCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: RYLCQQACYLPTAKGASQTQGVQ*CDFPKL
Trigger: GAGCTTGGGGAAGTCACACCACTGCACACCCTGCGT...CTGGCTGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR CCA 90 bp ACCAGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCAAGGGAGCCAGCGGCAGTGGTGGTCACTaGGGTGGCGTTTCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: TRYLCQQACYLPTAKGASGSGGH*GGVSSN
Trigger: GTTTGAGGAAACGCCACCCCAGTGACCACCACTGCC...GCTGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR TCA 90 bp GGTGCTGCGTCTGCCCGGCTCTGTGCTCTGAGTGCATGCGATGTGCCCGAGGTGTGTGCCCTTCCATCTTaGGCAATCCTGCACGTGTGG +
Preference number: 4 (lower is better)
Translates to: GAASARLCALSACDVPEVCALPS*AILHVW
Trigger: CCACACGTGCAGGATTGCTCAAGATGGAAGGGCACA...CACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCAGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329797.8
CDS-3UTR TCA 90 bp GCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCAACAGGAAGAGGATGCTaGCGTAGATGTTGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: APAPLEVVGCPMPSWALPTGRGC*RRCCRR
Trigger: TCTTCTGCAACATCTACGTCAGCATCCTCTTCCTGT...TGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR TCA 90 bp AAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCCAGCAGAGATGCAGGCGGAGATaGGGATGGCGGTCCTCCGGC +
Preference number: 4 (lower is better)
Translates to: KVIATDANRAATRYLCQQRCRRR*GWRSSG
Trigger: GCCGGAGGACCGCCATCCTCATCTCCGCCTGCATCT...CTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR TCA 90 bp GGCAGGAGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGTGGCAAAGCCAACGGTaGACCTGGCGTAGTAGTACC +
Preference number: 4 (lower is better)
Translates to: GRSPEGPQCTTASRQRLQWQSQR*TWRSST
Trigger: GGTACTACTACGCCAGGTTCACCGTTGGCTTTGCCA...CTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCTCCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR TCA 90 bp AGGCAGGCTGCTGATGAAGAGGCCCCACTGCCTGCCACATGCTCTCTGGGCTCCCAGCATGGTGCTCACTaGCATTCTGAGGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: RQAADEEAPLPATCSLGSQHGAH*HSEAGA
Trigger: GGCTCCTGCCTCAGAATGTCAGTGAGCACCATGCTG...GGAGCCCAGAGAGCATGTGGCAGGCAGTGGGGCCTCTTCATCAGCAGCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR TCA 90 bp GTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCCAGCAACTGCATAGCTGCCTaGCAAAACGAGAGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: VGCPMPSWALPQCWVTSSNCIAA*QNESVA
Trigger: AGCCACGCTCTCGTTTTGTCAGGCAGCTATGCAGTT...GCTGGAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR TCA 90 bp GACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCAGGCTGCAGTGAGCTATaGTGGTGCCACTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: DSAPRVQGAGFLRQTSRPGCSEL*WCHCSP
Trigger: TGGAGAACAGTGGCACCATCATAGCTCACTGCAGCC...TGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp TCTGACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGGAGTGTCGTGTCCCTTaGTCACCTTCCTCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: SDSAPRVQGAGFLRQTSRECRVP*SPSSLA
Trigger: TGCCAGGGAGGAAGGTGAGCAAGGGACACGACACTC...CCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329797.8
CDS-3UTR GCA 90 bp AGGCAGGCTGCTGATGAAGAGGCCCCACTGCCTGCCACATGCTCTCTGGGCTCCGAGTGTCGTGTCCCTTaGTCACCTTCCTCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: RQAADEEAPLPATCSLGSECRVP*SPSSLA
Trigger: TGCCAGGGAGGAAGGTGAGCAAGGGACACGACACTC...GGAGCCCAGAGAGCATGTGGCAGGCAGTGGGGCCTCTTCATCAGCAGCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000539291.6
CDS-3UTR GCA 90 bp AAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCCAGCAGGTCCCCACAGCCTCGCTaGGCTTGCTGGGTTTCTCCG +
Preference number: 4 (lower is better)
Translates to: KSSPLMRTGQPPGTSASRSPQPR*ACWVSP
Trigger: CGGAGAAACCCAGCAAGCGCAGCGAGGCTGTGGGGA...CCTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000539291.6
CDS-3UTR GCA 90 bp CCAACCCCAGATGAGGGCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCGACCAGGACTATCCTaGTCTCTTCGAAGGACACGT +
Preference number: 4 (lower is better)
Translates to: PTPDEGACPLGGGRLPYARPGLS*SLRRTR
Trigger: ACGTGTCCTTCGAAGAGAGCAGGATAGTCCTGGTCG...GGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCCCTCATCTGGGGTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GCTGTGTCACACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACATTTGGGGCTCCGGCACCCCCAGCGTaGACACCGCGCTGTACACCA +
Preference number: 4 (lower is better)
Translates to: AVSHLSCQLLFWAWTFGAPAPPA*TPRCTP
Trigger: TGGTGTACAGCGCGGTGTGCACGCTGGGGGTGCCGG...AGCCCCAAATGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp CCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGAGTACCCGGCAATCCTaGTGTCCATCTGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: PLEVVGCPMPSWALPQCWSTRQS*CPSAAC
Trigger: ACATGCTGCAGATGGACAGCAGGATTGCCGGGTACT...CCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GGCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCCTTAAGCCCATGCTCTaGTTGATGCTCCTGAAAATC +
Preference number: 4 (lower is better)
Translates to: GACPLGGGRLPYALLGAALKPML*LMLLKI
Trigger: GATTTTCAGGAGCATCAAGCAGAGCATGGGCTTAAG...GGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GGAAACCAGGGCATCAGTGTGACCTGGTCTAGGCAAGGCCTTTGCGGCAGACCCAGAGGCCCCACTGCCTaGCACATGCTCTCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: GNQGISVTWSRQGLCGRPRGPTA*HMLSGL
Trigger: GAGCCCAGAGAGCATGTGGCAGGCAGTGGGGCCTCT...GGGTCTGCCGCAAAGGCCTTGCCTAGACCAGGTCACACTGATGCCCTGGTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp AGTGCATGCGATGTGCCCGAGGTGTCGGGGCAGGGAGGAGGATTGATCTCGATGAGCAGGCGTGCTACCTaGCCACAGCCAAGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: SACDVPEVSGQGGGLISMSRRAT*PQPREP
Trigger: TGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCT...CATCGAGATCAATCCTCCTCCCTGCCCCGACACCTCGGGCACATCGCATGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp AGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCAGCAGGCGTGCTACCTaGCCACAGCCAAGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: SPEGPQCTTASRQRLQKCSRRAT*PQPREP
Trigger: TGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCT...GCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp AAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCCAGCAGGGCCACCAGGTACCTCTaGCAGCAGGCGTGCTACCTG +
Preference number: 4 (lower is better)
Translates to: KSSPLMRTGQPPGTSASRATRYL*QQACYL
Trigger: CAGGTAGCACGCCTGCTGGCAGAGGTACCTGGTGGC...CCTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp AGTGCATGCGATGTGCCCGAGGTGTCGGGGCAGGGAGGAGGATTGATCTCGATGTTGGAGGTGGTAGGCTaGCCTATGCCCTCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: SACDVPEVSGQGGGLISMLEVVG*PMPSWA
Trigger: CGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAA...CATCGAGATCAATCCTCCTCCCTGCCCCGACACCTCGGGCACATCGCATGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp TGCTGGGTGACCTCCAGCATGGTGCTCACTGACATTCTGAGGCAGGAGCCCAGAGCATCTCCCCGAGGATaGCGCTGGGGACTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: CWVTSSMVLTDILRQEPRASPRG*RWGLLA
Trigger: TGCCAGGAGTCCCCAGCGGCATCCTCGGGGAGATGC...TCTGGGCTCCTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp GGAAACCAGGGCATCAGTGTGACCTGGTCTAGGCAAGGCCTTTGCGGCAGACCCACTCAGCCCCGAGGGTaGAGGGAGCTGGCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: GNQGISVTWSRQGLCGRPTQPRG*RELAFS
Trigger: GGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGT...GGGTCTGCCGCAAAGGCCTTGCCTAGACCAGGTCACACTGATGCCCTGGTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp GCACGTTGCCCTGCAGTACCTGCAGCAGCGCCAGCCACGCAGTCAGGCAGTTGGTCTAGGCAAGGCCTTTaGGGCAGACCCAGATCTGAC +
Preference number: 4 (lower is better)
Translates to: ARCPAVPAAAPATQSGSWSRQGL*GRPRSD
Trigger: GTCAGATCTGGGTCTGCCGCAAAGGCCTTGCCTAGA...CCAACTGCCTGACTGCGTGGCTGGCGCTGCTGCAGGTACTGCAGGGCAACGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR GCA 90 bp AGGCAGGAGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGCTCTGTGCTCTGAGTaGATGCGATGTGCCCGAGGT +
Preference number: 4 (lower is better)
Translates to: RQEPRGPTMHHRIQATLAALCSE*MRCARG
Trigger: ACCTCGGGCACATCGCATGCACTCAGAGCACAGAGC...TGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCTCCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp AGTGCATGCGATGTGCCCGAGGTGTCGGGGCAGGGAGGAGGATTGATCTCGATGTGCAGGTGCTGCGTCTaGCCGGCTCTGTGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: SACDVPEVSGQGGGLISMCRCCV*PALCSE
Trigger: CTCAGAGCACAGAGCCGGGCAGACGCAGCACCTGCA...CATCGAGATCAATCCTCCTCCCTGCCCCGACACCTCGGGCACATCGCATGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp GCTGTGTCACACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACATTTGGGGCTGCACTGGGCTCCCCATaGAGGTGCTGCGTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: AVSHLSCQLLFWAWTFGAALGSP*RCCVCP
Trigger: CGGGCAGACGCAGCACCTGCATGGGGAGCCCAGTGC...AGCCCCAAATGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp ACCAGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCAAGGGAGCCAGCTGCTTTCCGTTCTCCTaGGTCAGACCCACAGTTGGC +
Preference number: 4 (lower is better)
Translates to: TRYLCQQACYLPTAKGASCFPFS*VRPTVG
Trigger: GCCAACTGTGGGTCTGACCCAGGAGAACGGAAAGCA...GCTGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000539291.6
CDS-3UTR CCA 90 bp GTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCCAGCTGGTGGTCACTGGGGTaGCGTTTCCATTGTAACCGT +
Preference number: 4 (lower is better)
Translates to: VGCPMPSWALPQCWVTSSWWSLG*RFHCNR
Trigger: ACGGTTACAATGGAAACGCCACCCCAGTGACCACCA...GCTGGAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000539291.6
CDS-3UTR CCA 90 bp AGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCAAGGGAGCCAGCCAGTTCACCTTGGCCTTCTaGGCAGCGCTTAAGCCCATG +
Preference number: 4 (lower is better)
Translates to: RYLCQQACYLPTAKGASQFTLAF*AALKPM
Trigger: CATGGGCTTAAGCGCTGCCCAGAAGGCCAAGGTGAA...CTGGCTGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp AGTGCATGCGATGTGCCCGAGGTGTCGGGGCAGGGAGGAGGATTGATCTCGATGCCCCCTGCCACACAGTaGGCTCAGCAGGACTCCTCA +
Preference number: 4 (lower is better)
Translates to: SACDVPEVSGQGGGLISMPPATQ*AQQDSS
Trigger: TGAGGAGTCCTGCTGAGCCCACTGTGTGGCAGGGGG...CATCGAGATCAATCCTCCTCCCTGCCCCGACACCTCGGGCACATCGCATGCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp AGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCCTTCCAGAGGGGACATaGGCACTGTGGCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: SPEGPQCTTASRQRLQKCLPEGT*ALWLVG
Trigger: GCCCACCAGCCACAGTGCCCATGTCCCCTCTGGAAG...GCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp AGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCGCGCTGCCACAGTGCTaGGTGACCTCCAGCATGGTG +
Preference number: 4 (lower is better)
Translates to: SPEGPQCTTASRQRLQKCALPQC*VTSSMV
Trigger: CACCATGCTGGAGGTCACCCAGCACTGTGGCAGCGC...GCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp TGGGGCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGGCCTGGGCTGCGCTCTaGGAGCCAGCAGCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: WGQWSRREWLQEREIGSLAWAAL*EPAAGH
Trigger: GTGGCCAGCTGCTGGCTCCCAGAGCGCAGCCCAGGC...CAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp CCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGTGCCAACTGTTGTTCTaGGCGTGGACATTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: PLEVVGCPMPSWALPQCWCQLLF*AWTFGA
Trigger: AGCCCCAAATGTCCACGCCCAGAACAACAGTTGGCA...CCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp GACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCAGATGGCTGTTTTGGCTaGGTGTGGTGGTGCACACCT +
Preference number: 4 (lower is better)
Translates to: DSAPRVQGAGFLRQTSRPDGCFG*VWWCTP
Trigger: AGGTGTGCACCACCACACCCAGCCAAAACAGCCATC...TGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp GGTGCTGCGTCTGCCCGGCTCTGTGCTCTGAGTGCATGCGATGTGCCCGAGGTGGATGGCTGTTTTGGCTaGGTGTGGTGGTGCACACCT +
Preference number: 4 (lower is better)
Translates to: GAASARLCALSACDVPEVDGCFG*VWWCTP
Trigger: AGGTGTGCACCACCACACCCAGCCAAAACAGCCATC...CACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp CCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCAACTGCTGCTCTCAAGGGGAGGATaGCTGTTTTGGCTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: PRGCRELAFSARQAGQLLLSRGG*LFWLGV
Trigger: CACACCCAGCCAAAACAGCCATCCTCCCCTTGAGAG...CAGCAGTTGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp GCACGTTGCCCTGCAGTACCTGCAGCAGCGCCAGCCACGCAGTCAGGCAGTTGGAGCCGCAGACAGACCTaGCCTCAGCACCATTGTAAC +
Preference number: 4 (lower is better)
Translates to: ARCPAVPAAAPATQSGSWSRRQT*PQHHCN
Trigger: GTTACAATGGTGCTGAGGCCAGGTCTGTCTGCGGCT...CCAACTGCCTGACTGCGTGGCTGGCGCTGCTGCAGGTACTGCAGGGCAACGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR CCA 90 bp CCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCAACTGCTGTGGTGGTCACTGGGGTaGCGTTTCCTCAAACACAGC +
Preference number: 4 (lower is better)
Translates to: PRGCRELAFSARQAGQLLWWSLG*RFLKHS
Trigger: GCTGTGTTTGAGGAAACGCCACCCCAGTGACCACCA...CAGCAGTTGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR TCA 90 bp GAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCACTGGGTTTCTCCGGGTaGGTGTCGTGTCCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: EGPQCTTASRQRLQKCSALGFSG*VSCPLL
Trigger: GAGCAAGGGACACGACACTCACCCGGAGAAACCCAG...TGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000539291.6
CDS-3UTR TCA 90 bp AGGCAGGAGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCACCTCTGTGCCTTAGCTaGGCTGCTGAGAATGACGGT +
Preference number: 4 (lower is better)
Translates to: RQEPRGPTMHHRIQATLAPLCLS*AAENDG
Trigger: ACCGTCATTCTCAGCAGCTCAGCTAAGGCACAGAGG...TGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCTCCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000539291.6
CDS-3UTR TCA 90 bp ATCAGTGTGACCTGGTCTAGGCAAGGCCTTTGCGGCAGACCCAGATCTGACTCATTTGGGGCTCCCCGTTaGGGACGCCTGGGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: ISVTWSRQGLCGRPRSDSFGAPR*GRLGCA
Trigger: AGCGCAGCCCAGGCGTCCTCAACGGGGAGCCCCAAA...TGAGTCAGATCTGGGTCTGCCGCAAAGGCCTTGCCTAGACCAGGTCACACTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR TCA 90 bp TCTGACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGGGCTGCAGTGAGCTATaGTGGTGCCACTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SDSAPRVQGAGFLRQTSRGCSEL*WCHCSP
Trigger: TGGAGAACAGTGGCACCATCATAGCTCACTGCAGCC...CCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp AAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCCAGCAGTCCCCACAGCCTCGCTaGGCTTGCTGGGTTTCTCCG +
Preference number: 4 (lower is better)
Translates to: KVIATDANRAATRYLCQQSPQPR*ACWVSP
Trigger: CGGAGAAACCCAGCAAGCGCAGCGAGGCTGTGGGGA...CTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000539291.6
CDS-3UTR GCA 90 bp GACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCACGACCAGGACTATCCTaGTCTCTTCGAAGGACACGT +
Preference number: 4 (lower is better)
Translates to: DSAPRVQGAGFLRQTSRPRPGLS*SLRRTR
Trigger: ACGTGTCCTTCGAAGAGAGCAGGATAGTCCTGGTCG...TGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp TGCTGGGTGACCTCCAGCATGGTGCTCACTGACATTCTGAGGCAGGAGCCCAGATTGCCCTGCAGTACCTaGAGCAGCGCCAGCCACGCA +
Preference number: 4 (lower is better)
Translates to: CWVTSSMVLTDILRQEPRLPCST*SSASHA
Trigger: TGCGTGGCTGGCGCTGCTGCAGGTACTGCAGGGCAA...TCTGGGCTCCTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GCTGTGGGTGAGCCTGGTGACGTCTGTCTTCATGGACCACTCTTTCCACCCCTTGCCAGCACGTTGCCCTaGAGTACCTGCAGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: AVGEPGDVCLHGPLFPPLASTLP*STCSSA
Trigger: GGCGCTGCTGCAGGTACTGCAGGGCAACGTGCTGGC...AAGGGGTGGAAAGAGTGGTCCATGAAGACAGACGTCACCAGGCTCACCCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR GCA 90 bp AGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCCAGCAGCTCGCAGAGTaGCAGGCAGAGCAGGTAGAC +
Preference number: 4 (lower is better)
Translates to: SPEGPQCTTASRQRLQKCQQLAE*QAEQVD
Trigger: GTCTACCTGCTCTGCCTGGCACTCTGCGAGCTGCTG...GCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp AAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCCAGCAGCCCAGAGTGGCAGCGTaGCTGTGTACAGCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: KVIATDANRAATRYLCQQPRVAA*LCTAAR
Trigger: GCGAGCTGCTGTACACAGGCACGCTGCCACTCTGGG...CTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp CTGCCACAGTGCTGGGTGACCTCCAGCATGGTGCTCACTGACATTCTGAGGCAGTGTAGGCGGTCACCTTaGAGGCCAGCAGGCCTAGGG +
Preference number: 4 (lower is better)
Translates to: LPQCWVTSSMVLTDILRQCRRSP*RPAGLG
Trigger: CCCTAGGCCTGCTGGCCTGCAAGGTGACCGCCTACA...CTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCACTGTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCATCCTGCTGTCCATCTaGAGCATGTCAAAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: GGRLPYALLGAATVLGDLILLSI*SMSKQV
Trigger: GACCTGCTTTGACATGCTGCAGATGGACAGCAGGAT...GAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp AGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCAAGGGAGCCAGCCAGAGTACCCGGCAATCCTaGTGTCCATCTGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: RYLCQQACYLPTAKGASQSTRQS*CPSAAC
Trigger: ACATGCTGCAGATGGACAGCAGGATTGCCGGGTACT...CTGGCTGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp AGTGCATGCGATGTGCCCGAGGTGTCGGGGCAGGGAGGAGGATTGATCTCGATGACCGCGATGGCCGAGTaGTTCACCTTGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SACDVPEVSGQGGGLISMTAMAE*FTLAFW
Trigger: CCAGAAGGCCAAGGTGAAGCACTCGGCCATCGCGGT...CATCGAGATCAATCCTCCTCCCTGCCCCGACACCTCGGGCACATCGCATGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp AGTGCATGCGATGTGCCCGAGGTGTCGGGGCAGGGAGGAGGATTGATCTCGATGAACCTGCCATCCCCCTaGCACACAGTGGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SACDVPEVSGQGGGLISMNLPSP*HTVGSA
Trigger: TGCTGAGCCCACTGTGTGGCAGGGGGATGGCAGGTT...CATCGAGATCAATCCTCCTCCCTGCCCCGACACCTCGGGCACATCGCATGCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp TGCTGGGTGACCTCCAGCATGGTGCTCACTGACATTCTGAGGCAGGAGCCCAGAAGAGGCCCCACTGCCTaGCACATGCTCTCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: CWVTSSMVLTDILRQEPRRGPTA*HMLSGL
Trigger: GAGCCCAGAGAGCATGTGGCAGGCAGTGGGGCCTCT...TCTGGGCTCCTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp AGGCAGGAGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGTGTCACACCTGTCCTaGCAACTGTTGTTCTGGGCG +
Preference number: 4 (lower is better)
Translates to: RQEPRGPTMHHRIQATLAVSHLS*QLLFWA
Trigger: CGCCCAGAACAACAGTTGGCAGGACAGGTGTGACAC...TGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCTCCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp TCTGCTGTGGCTGTGTCACACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACAGCATCTCCCCGAGGATaGCGCTGGGGACTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: SAVAVSHLSCQLLFWAWTASPRG*RWGLLA
Trigger: TGCCAGGAGTCCCCAGCGGCATCCTCGGGGAGATGC...TGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACAGCCACAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp GCTTTGACGAGGAGAACCAGGTGGTACGGGGCGAAGCAGACTAGGAAGATGACAGGCTCCCCATGCAGGTaGTGCGTCTGCCCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: ALTRRTRWYGAKQTRKMTGSPCR*CVCPAL
Trigger: CAGAGCCGGGCAGACGCAGCACCTGCATGGGGAGCC...TGTCATCTTCCTAGTCTGCTTCGCCCCGTACCACCTGGTTCTCCTCGTCAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR CCA 90 bp TGCGTCTGCCCGGCTCTGTGCTCTGAGTGCATGCGATGTGCCCGAGGTGTCGGGGCTCACCTTCCTCCCTaGCATATTTTGCGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: CVCPALCSECMRCARGVGAHLPP*HILRVP
Trigger: TGGAACCCGCAAAATATGCCAGGGAGGAAGGTGAGC...CCCGACACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329797.8
CDS-3UTR CCA 90 bp AGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCAAGGGAGCCAGCCAGGCTCACCTTCCTCCCTaGCATATTTTGCGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: RYLCQQACYLPTAKGASQAHLPP*HILRVP
Trigger: TGGAACCCGCAAAATATGCCAGGGAGGAAGGTGAGC...CTGGCTGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000539291.6
CDS-3UTR CCA 90 bp CAGGCGGAGATGAGGATGGCGGTCCTCCGGCGGCGGCGGCCCCGACTCTCCAGCCTTTCAAAGGCGGGATaGTATTCCATTGTATTCAGT +
Preference number: 4 (lower is better)
Translates to: QAEMRMAVLRRRRPRLSSLSKAG*YSIVFS
Trigger: ACTGAATACAATGGAATACCATCCCGCCTTTGAAAG...GCTGGAGAGTCGGGGCCGCCGCCGCCGGAGGACCGCCATCCTCATCTCCGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR CCA 90 bp GGAAACCAGGGCATCAGTGTGACCTGGTCTAGGCAAGGCCTTTGCGGCAGACCCTTTGTCTCTGTGCGCTaGGCTCCCCTGTCACCTCCC +
Preference number: 4 (lower is better)
Translates to: GNQGISVTWSRQGLCGRPFVSVR*APLSPP
Trigger: GGGAGGTGACAGGGGAGCCCAGCGCACAGAGACAAA...GGGTCTGCCGCAAAGGCCTTGCCTAGACCAGGTCACACTGATGCCCTGGTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000551869.1
CDS-3UTR CCA 90 bp TCTGCTGTGGCTGTGTCACACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACACCCACGGGGCAGTGGTaGTCACTGGGGTGGCGTTTC +
Preference number: 4 (lower is better)
Translates to: SAVAVSHLSCQLLFWAWTPTGQW*SLGWRF
Trigger: GAAACGCCACCCCAGTGACCACCACTGCCCCGTGGG...TGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACAGCCACAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp TGGGGCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGAGGCCCACGGGGCAGTaGTGGTCACTGGGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: WGQWSRREWLQEREIGSLRPTGQ*WSLGWR
Trigger: ACGCCACCCCAGTGACCACCACTGCCCCGTGGGCCT...CAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp ACCAGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCAAGGGAGCCAGCATAGATGACCCAGAGTaGCAGCGTGCCTGTGTACAG +
Preference number: 4 (lower is better)
Translates to: TRYLCQQACYLPTAKGASIDDPE*QRACVQ
Trigger: CTGTACACAGGCACGCTGCCACTCTGGGTCATCTAT...GCTGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp CCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGCTCCTGAAAATCCGGTaGTTGGTGAAGGCGATGATG +
Preference number: 4 (lower is better)
Translates to: PLEVVGCPMPSWALPQCWLLKIR*LVKAMM
Trigger: CATCATCGCCTTCACCAACCACCGGATTTTCAGGAG...CCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCATCGGTGTCCCTGCTGTaGGTGAGCCTGGTGACGTCT +
Preference number: 4 (lower is better)
Translates to: EGPQCTTASRQRLQKCSASVSLL*VSLVTS
Trigger: AGACGTCACCAGGCTCACCCACAGCAGGGACACCGA...TGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAGTGGGTGCACGGGCCTaGAGAAGGTGTAGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: EGPQCTTASRQRLQKCSAVGARA*RRCSGL
Trigger: CAGACCACTACACCTTCTCCAGGCCCGTGCACCCAC...TGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp AGTGCATGCGATGTGCCCGAGGTGTCGGGGCAGGGAGGAGGATTGATCTCGATGCAGCCACCTTCCATGTaGGAAAGCCTGGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: SACDVPEVSGQGGGLISMQPPSM*ESLGPV
Trigger: CACTGGCCCCAGGCTTTCCCACATGGAAGGTGGCTG...CATCGAGATCAATCCTCCTCCCTGCCCCGACACCTCGGGCACATCGCATGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp CTGCCACAGTGCTGGGTGACCTCCAGCATGGTGCTCACTGACATTCTGAGGCAGCTGCCACATGCTCTCTaGGCTCCCGGAAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LPQCWVTSSMVLTDILRQLPHAL*APGSLE
Trigger: CTCCAGGCTTCCGGGAGCCCAGAGAGCATGTGGCAG...CTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCACTGTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp CTGCCACAGTGCTGGGTGACCTCCAGCATGGTGCTCACTGACATTCTGAGGCAGGCGCTGCCACAGTGCTaGGTGACCTCCAGCATGGTG +
Preference number: 4 (lower is better)
Translates to: LPQCWVTSSMVLTDILRQALPQC*VTSSMV
Trigger: CACCATGCTGGAGGTCACCCAGCACTGTGGCAGCGC...CTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCACTGTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp AAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCCAGCAGGCGCTGCCACAGTGCTaGGTGACCTCCAGCATGGTG +
Preference number: 4 (lower is better)
Translates to: KVIATDANRAATRYLCQQALPQC*VTSSMV
Trigger: CACCATGCTGGAGGTCACCCAGCACTGTGGCAGCGC...CTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp ATCAGTGTGACCTGGTCTAGGCAAGGCCTTTGCGGCAGACCCAGATCTGACTCACCCGTTGAGGACGCCTaGGCTGCGCTCTGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: ISVTWSRQGLCGRPRSDSPVEDA*AALWEP
Trigger: TGGCTCCCAGAGCGCAGCCCAGGCGTCCTCAACGGG...TGAGTCAGATCTGGGTCTGCCGCAAAGGCCTTGCCTAGACCAGGTCACACTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp GCTGTGTCACACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACATTTGGGGCTTGCTGTGCCGGGCACTaGGCTCCCCATGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: AVSHLSCQLLFWAWTFGACCAGH*APHAGA
Trigger: AGCACCTGCATGGGGAGCCCAGTGCCCGGCACAGCA...AGCCCCAAATGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp GCTGTGGGTGAGCCTGGTGACGTCTGTCTTCATGGACCACTCTTTCCACCCCTTTGCTGTGCCGGGCACTaGGCTCCCCATGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: AVGEPGDVCLHGPLFPPLCCAGH*APHAGA
Trigger: AGCACCTGCATGGGGAGCCCAGTGCCCGGCACAGCA...AAGGGGTGGAAAGAGTGGTCCATGAAGACAGACGTCACCAGGCTCACCCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR CCA 90 bp TGCTGGGTGACCTCCAGCATGGTGCTCACTGACATTCTGAGGCAGGAGCCCAGAGACAAAACGAGAGCGTaGCTCAGCCCCACGGCCCTG +
Preference number: 4 (lower is better)
Translates to: CWVTSSMVLTDILRQEPRDKTRA*LSPTAL
Trigger: CAGGGCCGTGGGGCTGAGCCACGCTCTCGTTTTGTC...TCTGGGCTCCTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp CAGATGAGGGCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGTGGTGGTCACTGGGGTaGCGTTTCCTGGCATATTTT +
Preference number: 4 (lower is better)
Translates to: QMRAPAPLEVVGCPMPSWWWSLG*RFLAYF
Trigger: AAAATATGCCAGGAAACGCCACCCCAGTGACCACCA...CCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCCCTCATCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392585.2
3UTR CAA 72 bp ACCAGGACTATCCTGCTCTCTTCGAAGGACACGTTGTaGCAGGTCTTGGCGGAGAGGCCCAGGGAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: TRTILLSSKDTL*QVLAERPREAH
Trigger: GTGGGCCTCCCTGGGCCTCTCCGCCAAGACCTGCAACAACGTGTCCTTCGAAGAGAGCAGGATAGTCCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR CAA 72 bp ACGACCAGGACTATCCTGCTCTCTTCGAAGGACACGTaGTTGCAGGTCTTGGCGGAGAGGCCCAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: TTRTILLSSKDT*LQVLAERPREA
Trigger: GGCCTCCCTGGGCCTCTCCGCCAAGACCTGCAACAACGTGTCCTTCGAAGAGAGCAGGATAGTCCTGGTCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR TCA 90 bp GGGGCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTAGATGCAGGCGGAGATaGGGATGGCGGTCCTCCGGC +
Preference number: 4 (lower is better)
Translates to: GASGHGGSGFRNEKLVVCRCRRR*GWRSSG
Trigger: GCCGGAGGACCGCCATCCTCATCTCCGCCTGCATCT...ACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR TCA 90 bp GCAGCGGCTTTGACGAGGAGAACCAGGTGGTACGGGGCGAAGCAGACTAGGAAGCAGCATGGTGCTCACTaGCATTCTGAGGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: AAALTRRTRWYGAKQTRKQHGAH*HSEAGA
Trigger: GGCTCCTGCCTCAGAATGTCAGTGAGCACCATGCTG...CTTCCTAGTCTGCTTCGCCCCGTACCACCTGGTTCTCCTCGTCAAAGCCGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR TCA 90 bp TGCTGGGTGACCTCCAGCATGGTGCTCACTGACATTCTGAGGCAGGAGCCCAGATGCCACAGTGCTGGGTaGCCTCCAGCATGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: CWVTSSMVLTDILRQEPRCHSAG*PPAWCS
Trigger: TGAGCACCATGCTGGAGGTCACCCAGCACTGTGGCA...TCTGGGCTCCTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR TCA 90 bp ATCAGTGTGACCTGGTCTAGGCAAGGCCTTTGCGGCAGACCCAGATCTGACTCACGGCAGACCCAGATCTaGCTCAGCCCCGAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: ISVTWSRQGLCGRPRSDSRQTQI*LSPEGA
Trigger: TGCACCCTCGGGGCTGAGTCAGATCTGGGTCTGCCG...TGAGTCAGATCTGGGTCTGCCGCAAAGGCCTTGCCTAGACCAGGTCACACTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp AGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCAGCGGTCGCAGGAGATaGAGCACAGGAAGAGGATGC +
Preference number: 4 (lower is better)
Translates to: SPEGPQCTTASRQRLQKCSGRRR*STGRGC
Trigger: GCATCCTCTTCCTGTGCTGCATCTCCTGCGACCGCT...GCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp AGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCAAGGGAGCCAGCCAGATCCTGCTGTCCATCTaGAGCATGTCAAAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: RYLCQQACYLPTAKGASQILLSI*SMSKQV
Trigger: GACCTGCTTTGACATGCTGCAGATGGACAGCAGGAT...CTGGCTGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GGCAGGAGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGATCCTGCTGTCCATCTaGAGCATGTCAAAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: GRSPEGPQCTTASRQRLQILLSI*SMSKQV
Trigger: GACCTGCTTTGACATGCTGCAGATGGACAGCAGGAT...CTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCTCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp TGGGGCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGCCAGGACCCCCAACCTaGCATCCCCCTGCCACACAG +
Preference number: 4 (lower is better)
Translates to: WGQWSRREWLQEREIGSLPGPPT*HPPATQ
Trigger: CTGTGTGGCAGGGGGATGGCAGGTTGGGGGTCCTGG...CAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCATCCAGGCAACGCTTaGAGAAATGCTCCGCAAATA +
Preference number: 4 (lower is better)
Translates to: GGGRLPYALLGAATVLGDHPGNA*RNAPQI
Trigger: TATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATG...GTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GCTGTGTCACACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACATTTGGGGCTTGGGCGCTGCCACAGTaGTGGGTGACCTCCAGCATG +
Preference number: 4 (lower is better)
Translates to: AVSHLSCQLLFWAWTFGAWALPQ*WVTSSM
Trigger: CATGCTGGAGGTCACCCAGCACTGTGGCAGCGCCCA...AGCCCCAAATGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp ATCAGTGTGACCTGGTCTAGGCAAGGCCTTTGCGGCAGACCCAGATCTGACTCACCAGATGAGGGCGCCTaGCCCCTTGGAGGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: ISVTWSRQGLCGRPRSDSPDEGA*PLGGGR
Trigger: CCTACCACCTCCAAGGGGGCAGGCGCCCTCATCTGG...TGAGTCAGATCTGGGTCTGCCGCAAAGGCCTTGCCTAGACCAGGTCACACTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp GATGACTCTCAAGGGGAGGATGGCTGTTTTGGCTGGGTGTGGTGGTGCACACCTTGCAGGTGCTGCGTCTaGCCGGCTCTGTGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: DDSQGEDGCFGWVWWCTPCRCCV*PALCSE
Trigger: CTCAGAGCACAGAGCCGGGCAGACGCAGCACCTGCA...AGGTGTGCACCACCACACCCAGCCAAAACAGCCATCCTCCCCTTGAGAGTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp GACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCAGAGCAACTGCATAGCTaGCTGACAAAACGAGAGCGT +
Preference number: 4 (lower is better)
Translates to: DSAPRVQGAGFLRQTSRPEQLHS*LTKRER
Trigger: ACGCTCTCGTTTTGTCAGGCAGCTATGCAGTTGCTC...TGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp TGCTGGGTGACCTCCAGCATGGTGCTCACTGACATTCTGAGGCAGGAGCCCAGAACCTCCCCACGTGGGTaGGCATCTCTGCGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: CWVTSSMVLTDILRQEPRTSPRG*ASLRVF
Trigger: GAAGACACGCAGAGATGCCCACCCACGTGGGGAGGT...TCTGGGCTCCTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GCCGCACATGGCGTTCCTGTCTCCTCTGTAGTAGGAAAAGGCAGCGGCTTTGACCGTTGTTGCAGGTCTTaGCGGAGAGGCCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: AAHGVPVSSVVGKGSGFDRCCRS*RRGPGR
Trigger: CCTCCCTGGGCCTCTCCGCCAAGACCTGCAACAACG...GTCAAAGCCGCTGCCTTTTCCTACTACAGAGGAGACAGGAACGCCATGTGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR CCA 90 bp GCAGCGGCTTTGACGAGGAGAACCAGGTGGTACGGGGCGAAGCAGACTAGGAAGACGAGGAGAACCAGGTaGTACGGGGCGAAGCAGACT +
Preference number: 4 (lower is better)
Translates to: AAALTRRTRWYGAKQTRKTRRTR*YGAKQT
Trigger: AGTCTGCTTCGCCCCGTACCACCTGGTTCTCCTCGT...CTTCCTAGTCTGCTTCGCCCCGTACCACCTGGTTCTCCTCGTCAAAGCCGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR CCA 90 bp GAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCACCACGCCGTTCACCGTaGACAGGCACAGAAACACCA +
Preference number: 4 (lower is better)
Translates to: EGPQCTTASRQRLQKCSAPRRSP*TGTETP
Trigger: TGGTGTTTCTGTGCCTGTCCACGGTGAACGGCGTGG...TGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCCAGACCCCTTATGGATTCTaGACACTTCTTGGCGGGAAT +
Preference number: 4 (lower is better)
Translates to: GRLPYALLGAATVLGDLQTPYGF*TLLGGN
Trigger: ATTCCCGCCAAGAAGTGTCCAGAATCCATAAGGGGT...CTGGAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp TGCTGGGTGACCTCCAGCATGGTGCTCACTGACATTCTGAGGCAGGAGCCCAGAGTGGGTGCACGGGCCTaGAGAAGGTGTAGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: CWVTSSMVLTDILRQEPRVGARA*RRCSGL
Trigger: CAGACCACTACACCTTCTCCAGGCCCGTGCACCCAC...TCTGGGCTCCTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp AGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCACCTGCGCGGCCTCCCTaGAAGCCCCTGTGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: RNAPQIKSSPLMRTGQPPPARPP*KPLCCA
Trigger: GGCACAGCACAGGGGCTTCCAGGGAGGCCGCGCAGG...TGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp TTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCCCTGCGCGGCCTCCCTaGAAGCCCCTGTGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: LQKCSANKVIATDANRAAPARPP*KPLCCA
Trigger: GGCACAGCACAGGGGCTTCCAGGGAGGCCGCGCAGG...GGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR TCA 90 bp AGTGCATGCGATGTGCCCGAGGTGTCGGGGCAGGGAGGAGGATTGATCTCGATGACGGTGTCAAGAACATaGGGAGGGCTGTTCACGTCC +
Preference number: 4 (lower is better)
Translates to: SACDVPEVSGQGGGLISMTVSRT*GGLFTS
Trigger: GGACGTGAACAGCCCTCCTCATGTTCTTGACACCGT...CATCGAGATCAATCCTCCTCCCTGCCCCGACACCTCGGGCACATCGCATGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329797.8
CDS-3UTR TCA 90 bp GCAGCGGCTTTGACGAGGAGAACCAGGTGGTACGGGGCGAAGCAGACTAGGAAGTGGCAAAGCCAACGGTaGACCTGGCGTAGTAGTACC +
Preference number: 4 (lower is better)
Translates to: AAALTRRTRWYGAKQTRKWQSQR*TWRSST
Trigger: GGTACTACTACGCCAGGTTCACCGTTGGCTTTGCCA...CTTCCTAGTCTGCTTCGCCCCGTACCACCTGGTTCTCCTCGTCAAAGCCGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR TCA 90 bp CTGCCACAGTGCTGGGTGACCTCCAGCATGGTGCTCACTGACATTCTGAGGCAGCAGCATGGTGCTCACTaGCATTCTGAGGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LPQCWVTSSMVLTDILRQQHGAH*HSEAGA
Trigger: GGCTCCTGCCTCAGAATGTCAGTGAGCACCATGCTG...CTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCACTGTGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCACAAGCTCCCTCCTGTTaGAGCGTGTGCCAGGATTTC +
Preference number: 4 (lower is better)
Translates to: EGPQCTTASRQRLQKCSAQAPSC*SVCQDF
Trigger: GAAATCCTGGCACACGCTGCAACAGGAGGGAGCTTG...TGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp AGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCAAGGGAGCCAGCCAGACATTCACATTCTTCTaGAACCATCGCCAGCATCCG +
Preference number: 4 (lower is better)
Translates to: RYLCQQACYLPTAKGASQTFTFF*NHRQHP
Trigger: CGGATGCTGGCGATGGTTGCAGAAGAATGTGAATGT...CTGGCTGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GATGACTCTCAAGGGGAGGATGGCTGTTTTGGCTGGGTGTGGTGGTGCACACCTAGACGGCCAGCACGTTaGCCTGCAGTACCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: DDSQGEDGCFGWVWWCTPRRPAR*PAVPAA
Trigger: TGCTGCAGGTACTGCAGGGCAACGTGCTGGCCGTCT...AGGTGTGCACCACCACACCCAGCCAAAACAGCCATCCTCCCCTTGAGAGTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp TTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCAGGGCCACGGGCGACTaGAGCTCCTCGGTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: LQKCSANKVIATDANRAARATGD*SSSVSL
Trigger: CAGGGACACCGAGGAGCTGCAGTCGCCCGTGGCCCT...GGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GCTGTGTCACACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACATTTGGGGCTCTCCTCCCCTTGGCATaGAGCCACCTTCCATGTGGG +
Preference number: 4 (lower is better)
Translates to: AVSHLSCQLLFWAWTFGALLPLA*SHLPCG
Trigger: CCCACATGGAAGGTGGCTGCATGCCAAGGGGAGGAG...AGCCCCAAATGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp GAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAGTGTCACACCTGTCCTaGCAACTGTTGTTCTGGGCG +
Preference number: 4 (lower is better)
Translates to: EGPQCTTASRQRLQKCSAVSHLS*QLLFWA
Trigger: CGCCCAGAACAACAGTTGGCAGGACAGGTGTGACAC...TGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp GCTGTGTCACACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACATTTGGGGCTACTCCTGGCACCCCTTaGCTCTGCTGTGGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: AVSHLSCQLLFWAWTFGATPGTP*LCCGCV
Trigger: GACACAGCCACAGCAGAGGCAAGGGGTGCCAGGAGT...AGCCCCAAATGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp TTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCGGCTCCCCATGCAGGTaGTGCGTCTGCCCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LQKCSANKVIATDANRAAGSPCR*CVCPAL
Trigger: CAGAGCCGGGCAGACGCAGCACCTGCATGGGGAGCC...GGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp CTGCCACAGTGCTGGGTGACCTCCAGCATGGTGCTCACTGACATTCTGAGGCAGCTCCAGTGTCCTGGCTaGCCACTCTGGCTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: LPQCWVTSSMVLTDILRQLQCPG*PLWLSS
Trigger: TGAACTCAGCCAGAGTGGGCAGCCAGGACACTGGAG...CTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCACTGTGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR CCA 90 bp GCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGTGTTCTCCACGGTGGTaGCGCTGGCCCACCTTCCCC +
Preference number: 4 (lower is better)
Translates to: APPHPGNACRNAPQIKSSCSPRW*RWPTFP
Trigger: GGGGAAGGTGGGCCAGCGCCACCACCGTGGAGAACA...CGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000539291.6
CDS-3UTR CCA 90 bp GAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAGGCAGTGGTGGTCACTaGGGTGGCGTTTCCATTGTA +
Preference number: 4 (lower is better)
Translates to: EGPQCTTASRQRLQKCSAGSGGH*GGVSIV
Trigger: TACAATGGAAACGCCACCCCAGTGACCACCACTGCC...TGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000539291.6
CDS-3UTR CCA 90 bp TTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCACGCAGTCAGGCAGTTaGCCGGCACCCCCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: LQKCSANKVIATDANRAATQSGS*PAPPAC
Trigger: GCACGCTGGGGGTGCCGGCCAACTGCCTGACTGCGT...GGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp AGGCAGGAGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCACTCCTGAAAATCCGGTaGTTGGTGAAGGCGATGATG +
Preference number: 4 (lower is better)
Translates to: RQEPRGPTMHHRIQATLALLKIR*LVKAMM
Trigger: CATCATCGCCTTCACCAACCACCGGATTTTCAGGAG...TGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCTCCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GGAAACCAGGGCATCAGTGTGACCTGGTCTAGGCAAGGCCTTTGCGGCAGACCCTTCACCTTGGCCTTCTaGGCAGCGCTTAAGCCCATG +
Preference number: 4 (lower is better)
Translates to: GNQGISVTWSRQGLCGRPFTLAF*AALKPM
Trigger: CATGGGCTTAAGCGCTGCCCAGAAGGCCAAGGTGAA...GGGTCTGCCGCAAAGGCCTTGCCTAGACCAGGTCACACTGATGCCCTGGTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp GGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACTCTTTCCACCCCTTATaGATTCTGGACACTTCTTGG +
Preference number: 4 (lower is better)
Translates to: GGGRLPYALLGAATVLGDSFHPL*ILDTSW
Trigger: CCAAGAAGTGTCCAGAATCCATAAGGGGTGGAAAGA...GTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GATGACTCTCAAGGGGAGGATGGCTGTTTTGGCTGGGTGTGGTGGTGCACACCTCAGGAACCACATTGCTaGCCCCAGGACCCCCAACCT +
Preference number: 4 (lower is better)
Translates to: DDSQGEDGCFGWVWWCTPQEPHC*PQDPQP
Trigger: AGGTTGGGGGTCCTGGGGCCAGCAATGTGGTTCCTG...AGGTGTGCACCACCACACCCAGCCAAAACAGCCATCCTCCCCTTGAGAGTCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp GCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCGGGACATGGGCACTGTaGCTGGTGGGCTCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: ANKVIATDANRAATRYLCGTWAL*LVGSVH
Trigger: GTGCACTGAGCCCACCAGCCACAGTGCCCATGTCCC...GCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GATGACTCTCAAGGGGAGGATGGCTGTTTTGGCTGGGTGTGGTGGTGCACACCTCAGCCACCTTCCATGTaGGAAAGCCTGGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: DDSQGEDGCFGWVWWCTPQPPSM*ESLGPV
Trigger: CACTGGCCCCAGGCTTTCCCACATGGAAGGTGGCTG...AGGTGTGCACCACCACACCCAGCCAAAACAGCCATCCTCCCCTTGAGAGTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp GCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCCTGCCACATGCTCTCTaGGCTCCCGGAAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: ANKVIATDANRAATRYLCLPHAL*APGSLE
Trigger: CTCCAGGCTTCCGGGAGCCCAGAGAGCATGTGGCAG...GCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp CTGCCACAGTGCTGGGTGACCTCCAGCATGGTGCTCACTGACATTCTGAGGCAGCTGTTGTTCTGGGCGTaGACATTTGGGGCTCCCCGT +
Preference number: 4 (lower is better)
Translates to: LPQCWVTSSMVLTDILRQLLFWA*TFGAPR
Trigger: ACGGGGAGCCCCAAATGTCCACGCCCAGAACAACAG...CTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCACTGTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp CACACCGCGCTGTACACCACGACCAGGACTATCCTGCTCTCTTCGAAGGACACGCTGTTGTTCTGGGCGTaGACATTTGGGGCTCCCCGT +
Preference number: 4 (lower is better)
Translates to: HTALYTTTRTILLSSKDTLLFWA*TFGAPR
Trigger: ACGGGGAGCCCCAAATGTCCACGCCCAGAACAACAG...CGTGTCCTTCGAAGAGAGCAGGATAGTCCTGGTCGTGGTGTACAGCGCGGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR CCA 90 bp AGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCACCCCGAGGATGCCGCTaGGGACTCCTGGCACCCCTT +
Preference number: 4 (lower is better)
Translates to: RNAPQIKSSPLMRTGQPPPRGCR*GLLAPL
Trigger: AAGGGGTGCCAGGAGTCCCCAGCGGCATCCTCGGGG...TGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp TCTGCTGTGGCTGTGTCACACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACAGAGGGTGCAGGGAGCTaGCTTTCTCCGCCAGACAAG +
Preference number: 4 (lower is better)
Translates to: SAVAVSHLSCQLLFWAWTEGAGS*LSPPDK
Trigger: CTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTC...TGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACAGCCACAGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp AGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCCTCTCAAGGGGAGGATaGCTGTTTTGGCTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: SPEGPQCTTASRQRLQKCLSRGG*LFWLGV
Trigger: CACACCCAGCCAAAACAGCCATCCTCCCCTTGAGAG...GCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp TCTGACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCTTCTGGGCCTTCTGTaGTTACAGATCATGGAGTCC +
Preference number: 4 (lower is better)
Translates to: SDSAPRVQGAGFLRQTSRLLGLL*LQIMES
Trigger: GGACTCCATGATCTGTAACCACAGAAGGCCCAGAAG...CCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR TCA 90 bp GATGACTCTCAAGGGGAGGATGGCTGTTTTGGCTGGGTGTGGTGGTGCACACCTGGTTGCGGATATAGATaGCCCAGAGTGGCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: DDSQGEDGCFGWVWWCTPGCGYR*PRVAAC
Trigger: GCACGCTGCCACTCTGGGTCATCTATATCCGCAACC...AGGTGTGCACCACCACACCCAGCCAAAACAGCCATCCTCCCCTTGAGAGTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR TCA 90 bp CTGCCACAGTGCTGGGTGACCTCCAGCATGGTGCTCACTGACATTCTGAGGCAGAAAAGGCAGCGGCTTTaGCGAGGAGAACCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: LPQCWVTSSMVLTDILRQKRQRL*RGEPGG
Trigger: ACCACCTGGTTCTCCTCGTCAAAGCCGCTGCCTTTT...CTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCACTGTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR TCA 90 bp CACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGCCCGGCTCTGTGCTCTaGGTGCATGCGATGTGCCCG +
Preference number: 4 (lower is better)
Translates to: HNAPPHPGNACRNAPQIKPGSVL*VHAMCP
Trigger: CGGGCACATCGCATGCACTCAGAGCACAGAGCCGGG...CTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR TCA 90 bp TGCTGGGTGACCTCCAGCATGGTGCTCACTGACATTCTGAGGCAGGAGCCCAGAGGCTGCAGTGAGCTATaGTGGTGCCACTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: CWVTSSMVLTDILRQEPRGCSEL*WCHCSP
Trigger: TGGAGAACAGTGGCACCATCATAGCTCACTGCAGCC...TCTGGGCTCCTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR TCA 90 bp AGGCAGGAGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCATCTGAGAGTTTAAAATaGCCTCGGCCTCCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: RQEPRGPTMHHRIQATLASESLK*PRPPKV
Trigger: CACTTTGGGAGGCCGAGGTCATTTTAAACTCTCAGA...TGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCTCCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539291.6
CDS-3UTR GCA 90 bp CAGATGAGGGCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGTCTAAGTACATGTCATaGGTCTTGTCGGTCCTATCA +
Preference number: 4 (lower is better)
Translates to: QMRAPAPLEVVGCPMPSWSKYMS*VLSVLS
Trigger: TGATAGGACCGACAAGACGCATGACATGTACTTAGA...CCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCCCTCATCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
CDS-3UTR GCA 90 bp GATGACTCTCAAGGGGAGGATGGCTGTTTTGGCTGGGTGTGGTGGTGCACACCTTCCACTTTGTCTCTGTaGGCTGGGCTCCCCTGTCAC +
Preference number: 4 (lower is better)
Translates to: DDSQGEDGCFGWVWWCTPSTLSL*AGLPCH
Trigger: GTGACAGGGGAGCCCAGCGCACAGAGACAAAGTGGA...AGGTGTGCACCACCACACCCAGCCAAAACAGCCATCCTCCCCTTGAGAGTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000551869.1
CDS-3UTR GCA 90 bp CACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGCACTCGCTCCGCATTTaGTCCCAGCCCCCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: HNAPPHPGNACRNAPQIKHSLRI*SQPPGL
Trigger: GAGGCCTGGGGGCTGGGAGCAAATGCGGAGCGAGTG...CTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp TCTGCTGTGGCTGTGTCACACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACACGAAGGACACGTTGTTaGAGGTCTTGGCGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: SAVAVSHLSCQLLFWAWTRRTRC*RSWRRG
Trigger: GCCTCTCCGCCAAGACCTGCAACAACGTGTCCTTCG...TGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACAGCCACAGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp GCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTCTTGCCAGCACGTTGCCCTaGAGTACCTGCAGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: ASGHGGSGFRNEKLVVCLASTLP*STCSSA
Trigger: GGCGCTGCTGCAGGTACTGCAGGGCAACGTGCTGGC...AAGACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GGTGCTGCGTCTGCCCGGCTCTGTGCTCTGAGTGCATGCGATGTGCCCGAGGTGCTTAAGCCCATGCTCTaGTTGATGCTCCTGAAAATC +
Preference number: 4 (lower is better)
Translates to: GAASARLCALSACDVPEVLKPML*LMLLKI
Trigger: GATTTTCAGGAGCATCAAGCAGAGCATGGGCTTAAG...CACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp AGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACAGGGCCACGGGCGACTaGAGCTCCTCGGTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: RQRLQKCSANKVIATDANRATGD*SSSVSL
Trigger: CAGGGACACCGAGGAGCTGCAGTCGCCCGTGGCCCT...GTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp CACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGCCAGGACCCCCAACCTaGCATCCCCCTGCCACACAG +
Preference number: 4 (lower is better)
Translates to: HNAPPHPGNACRNAPQIKPGPPT*HPPATQ
Trigger: CTGTGTGGCAGGGGGATGGCAGGTTGGGGGTCCTGG...CTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp TGGGGCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGGCACAGGAACCACATTaGTGGCCCCAGGACCCCCAA +
Preference number: 4 (lower is better)
Translates to: WGQWSRREWLQEREIGSLAQEPH*WPQDPQ
Trigger: TTGGGGGTCCTGGGGCCAGCAATGTGGTTCCTGTGC...CAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp TGGGGCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGCTCCTCCCCTTGGCATaGAGCCACCTTCCATGTGGG +
Preference number: 4 (lower is better)
Translates to: WGQWSRREWLQEREIGSLLLPLA*SHLPCG
Trigger: CCCACATGGAAGGTGGCTGCATGCCAAGGGGAGGAG...CAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCAACGCTTGCAGAAATaGTCCGCAAATAAAGTCATC +
Preference number: 4 (lower is better)
Translates to: GGGRLPYALLGAATVLGDQRLQK*SANKVI
Trigger: GATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTG...GTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GGGGCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTCCAGAGGGCCCACAATaGACCACCGCATCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: GASGHGGSGFRNEKLVVCPEGPQ*TTASRQ
Trigger: TTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGG...ACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp TGGGGCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGCCAGAGGGCCCACAATaGACCACCGCATCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: WGQWSRREWLQEREIGSLPEGPQ*TTASRQ
Trigger: TTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGG...CAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp TGGGGCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGGGCACCCCTTGCCTCTaGTGTGGCTGTGTCACACCT +
Preference number: 4 (lower is better)
Translates to: WGQWSRREWLQEREIGSLGTPCL*CGCVTP
Trigger: AGGTGTGACACAGCCACAGCAGAGGCAAGGGGTGCC...CAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp TGCGTCTGCCCGGCTCTGTGCTCTGAGTGCATGCGATGTGCCCGAGGTGTCGGGAAAGAGACAAGATTTTaGCATGTTGCCGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: CVCPALCSECMRCARGVGKETRF*HVAEAG
Trigger: ACCAGCCTCGGCAACATGGCAAAATCTTGTCTCTTT...CCCGACACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp GGCAGGAGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAAGAGACAAGATTTTaGCATGTTGCCGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: GRSPEGPQCTTASRQRLQKETRF*HVAEAG
Trigger: ACCAGCCTCGGCAACATGGCAAAATCTTGTCTCTTT...CTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCTCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp TGCTGGGTGACCTCCAGCATGGTGCTCACTGACATTCTGAGGCAGGAGCCCAGAGGTCAGACCCACAGTTaGCATTGCTGGATCTCACGG +
Preference number: 4 (lower is better)
Translates to: CWVTSSMVLTDILRQEPRGQTHS*HCWISR
Trigger: CCGTGAGATCCAGCAATGCCAACTGTGGGTCTGACC...TCTGGGCTCCTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000539291.6
CDS-3UTR CCA 90 bp ATCAGTGTGACCTGGTCTAGGCAAGGCCTTTGCGGCAGACCCAGATCTGACTCAACCTCCCCACGTGGGTaGGCATCTCTGCGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: ISVTWSRQGLCGRPRSDSTSPRG*ASLRVF
Trigger: GAAGACACGCAGAGATGCCCACCCACGTGGGGAGGT...TGAGTCAGATCTGGGTCTGCCGCAAAGGCCTTGCCTAGACCAGGTCACACTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000551869.1
CDS-3UTR CCA 90 bp CTGCCACAGTGCTGGGTGACCTCCAGCATGGTGCTCACTGACATTCTGAGGCAGGGCAGTGGTGGTCACTaGGGTGGCGTTTCCATTGTA +
Preference number: 4 (lower is better)
Translates to: LPQCWVTSSMVLTDILRQGSGGH*GGVSIV
Trigger: TACAATGGAAACGCCACCCCAGTGACCACCACTGCC...CTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCACTGTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000539291.6
CDS-3UTR CCA 90 bp AGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCATAGATGACCCAGAGTaGCAGCGTGCCTGTGTACAG +
Preference number: 4 (lower is better)
Translates to: SPEGPQCTTASRQRLQKCIDDPE*QRACVQ
Trigger: CTGTACACAGGCACGCTGCCACTCTGGGTCATCTAT...GCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp TCTGCTGTGGCTGTGTCACACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACACCTCCAAGCCGCACATaGCGTTCCTGTCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: SAVAVSHLSCQLLFWAWTPPSRT*RSCLLC
Trigger: ACAGAGGAGACAGGAACGCCATGTGCGGCTTGGAGG...TGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACAGCCACAGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp TCTGCTGTGGCTGTGTCACACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACACCACGCCGTTCACCGTaGACAGGCACAGAAACACCA +
Preference number: 4 (lower is better)
Translates to: SAVAVSHLSCQLLFWAWTPRRSP*TGTETP
Trigger: TGGTGTTTCTGTGCCTGTCCACGGTGAACGGCGTGG...TGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACAGCCACAGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp TCTGACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGACCCCTTATGGATTCTaGACACTTCTTGGCGGGAAT +
Preference number: 4 (lower is better)
Translates to: SDSAPRVQGAGFLRQTSRTPYGF*TLLGGN
Trigger: ATTCCCGCCAAGAAGTGTCCAGAATCCATAAGGGGT...CCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp GGTGCTGCGTCTGCCCGGCTCTGTGCTCTGAGTGCATGCGATGTGCCCGAGGTGTCTTTCCACCCCTTATaGATTCTGGACACTTCTTGG +
Preference number: 4 (lower is better)
Translates to: GAASARLCALSACDVPEVSFHPL*ILDTSW
Trigger: CCAAGAAGTGTCCAGAATCCATAAGGGGTGGAAAGA...CACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp AGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTCTTCCACTGGGAGCCAGCAGCTaGCCACCCTGCCCCACGGTT +
Preference number: 4 (lower is better)
Translates to: SGHGGSGFRNEKLVVCLPLGASS*PPCPTV
Trigger: AACCGTGGGGCAGGGTGGCCAGCTGCTGGCTCCCAG...TGGAAGACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp AGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACCCCGTTGAGGACGCCTaGGCTGCGCTCTGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: RQRLQKCSANKVIATDANPVEDA*AALWEP
Trigger: TGGCTCCCAGAGCGCAGCCCAGGCGTCCTCAACGGG...GTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp ATCAGTGTGACCTGGTCTAGGCAAGGCCTTTGCGGCAGACCCAGATCTGACTCAGAGGGTGCAGGGAGCTaGCTTTCTCCGCCAGACAAG +
Preference number: 4 (lower is better)
Translates to: ISVTWSRQGLCGRPRSDSEGAGS*LSPPDK
Trigger: CTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTC...TGAGTCAGATCTGGGTCTGCCGCAAAGGCCTTGCCTAGACCAGGTCACACTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR TCA 90 bp AGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCAAGGGAGCCAGCCAGTCAAGACGTTCACTCTaGGAGTTTAAAATGACCCAG +
Preference number: 4 (lower is better)
Translates to: RYLCQQACYLPTAKGASQSRRSL*EFKMTQ
Trigger: CTGGGTCATTTTAAACTCTCAGAGTGAACGTCTTGA...CTGGCTGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000392585.2
CDS-3UTR TCA 90 bp GGGGCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTGGTTGCGGATATAGATaGCCCAGAGTGGCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: GASGHGGSGFRNEKLVVCGCGYR*PRVAAC
Trigger: GCACGCTGCCACTCTGGGTCATCTATATCCGCAACC...ACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR TCA 90 bp AGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTCTTCCAAGATGCAGGCGGAGATaGGGATGGCGGTCCTCCGGC +
Preference number: 4 (lower is better)
Translates to: SGHGGSGFRNEKLVVCLPRCRRR*GWRSSG
Trigger: GCCGGAGGACCGCCATCCTCATCTCCGCCTGCATCT...TGGAAGACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR TCA 90 bp GCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCAGCAGACTAGGAAGATaGCAACCACCGCGATGGCCG +
Preference number: 4 (lower is better)
Translates to: ANKVIATDANRAATRYLCSRLGR*QPPRWP
Trigger: CGGCCATCGCGGTGGTTGTCATCTTCCTAGTCTGCT...GCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR TCA 90 bp GGGGCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTCAGCATGGTGCTCACTaGCATTCTGAGGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: GASGHGGSGFRNEKLVVCQHGAH*HSEAGA
Trigger: GGCTCCTGCCTCAGAATGTCAGTGAGCACCATGCTG...ACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR TCA 90 bp GCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGACCAGGGCATCAGTGTaGCCTGGTCTAGGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: APPHPGNACRNAPQIKSSTRASV*PGLGKA
Trigger: GGCCTTGCCTAGACCAGGTCACACTGATGCCCTGGT...CGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR TCA 90 bp TGCTGGGTGACCTCCAGCATGGTGCTCACTGACATTCTGAGGCAGGAGCCCAGAAACTGCATAGCTGCCTaGCAAAACGAGAGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: CWVTSSMVLTDILRQEPRNCIAA*QNESVA
Trigger: AGCCACGCTCTCGTTTTGTCAGGCAGCTATGCAGTT...TCTGGGCTCCTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp CCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCAACTGCTGTCTAAGTACATGTCATaGGTCTTGTCGGTCCTATCA +
Preference number: 4 (lower is better)
Translates to: PRGCRELAFSARQAGQLLSKYMS*VLSVLS
Trigger: TGATAGGACCGACAAGACGCATGACATGTACTTAGA...CAGCAGTTGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000392585.2
CDS-3UTR GCA 90 bp AGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACCACTCGCTCCGCATTTaGTCCCAGCCCCCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: RQRLQKCSANKVIATDANHSLRI*SQPPGL
Trigger: GAGGCCTGGGGGCTGGGAGCAAATGCGGAGCGAGTG...GTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp AAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCCAGCAGCGACCAGGACTATCCTaGTCTCTTCGAAGGACACGT +
Preference number: 4 (lower is better)
Translates to: KVIATDANRAATRYLCQQRPGLS*SLRRTR
Trigger: ACGTGTCCTTCGAAGAGAGCAGGATAGTCCTGGTCG...CTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GCTTTGACGAGGAGAACCAGGTGGTACGGGGCGAAGCAGACTAGGAAGATGACAAGCGGTCGCAGGAGATaGAGCACAGGAAGAGGATGC +
Preference number: 4 (lower is better)
Translates to: ALTRRTRWYGAKQTRKMTSGRRR*STGRGC
Trigger: GCATCCTCTTCCTGTGCTGCATCTCCTGCGACCGCT...TGTCATCTTCCTAGTCTGCTTCGCCCCGTACCACCTGGTTCTCCTCGTCAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR GCA 90 bp GCAGCGGCTTTGACGAGGAGAACCAGGTGGTACGGGGCGAAGCAGACTAGGAAGATCCTGCTGTCCATCTaGAGCATGTCAAAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: AAALTRRTRWYGAKQTRKILLSI*SMSKQV
Trigger: GACCTGCTTTGACATGCTGCAGATGGACAGCAGGAT...CTTCCTAGTCTGCTTCGCCCCGTACCACCTGGTTCTCCTCGTCAAAGCCGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR GCA 90 bp GCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGGAAGGTGTAGTGGTCTaGAAGGGCCACGGGCGACTG +
Preference number: 4 (lower is better)
Translates to: APPHPGNACRNAPQIKSSEGVVV*KGHGRL
Trigger: CAGTCGCCCGTGGCCCTTGCAGACCACTACACCTTC...CGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GGGGCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTATGAAGAGGCCCCACTaGCTGCCACATGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GASGHGGSGFRNEKLVVCMKRPH*LPHALW
Trigger: CCAGAGAGCATGTGGCAGGCAGTGGGGCCTCTTCAT...ACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTCTTAGCAGGCGTGCTACCTaGCCACAGCCAAGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: ASGHGGSGFRNEKLVVCLSRRAT*PQPREP
Trigger: TGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCT...AAGACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp CCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCAACTGCTGCAACGCTTGCAGAAATaGTCCGCAAATAAAGTCATC +
Preference number: 4 (lower is better)
Translates to: PRGCRELAFSARQAGQLLQRLQK*SANKVI
Trigger: GATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTG...CAGCAGTTGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp AGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACCCAGATGAGGGCGCCTaGCCCCTTGGAGGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: RQRLQKCSANKVIATDANPDEGA*PLGGGR
Trigger: CCTACCACCTCCAAGGGGGCAGGCGCCCTCATCTGG...GTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATCCAGATGAGGGCGCCTaGCCCCTTGGAGGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: ASRQRLQKCSANKVIATDPDEGA*PLGGGR
Trigger: CCTACCACCTCCAAGGGGGCAGGCGCCCTCATCTGG...ATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCGCTCTGTGCTCTGAGTaGATGCGATGTGCCCGAGGT +
Preference number: 4 (lower is better)
Translates to: ANKVIATDANRAATRYLCALCSE*MRCARG
Trigger: ACCTCGGGCACATCGCATGCACTCAGAGCACAGAGC...GCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp CAGATGAGGGCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGCTTTCAAAGGCGGGATaGTATTCCATTGTATTCAGT +
Preference number: 4 (lower is better)
Translates to: QMRAPAPLEVVGCPMPSWLSKAG*YSIVFS
Trigger: ACTGAATACAATGGAATACCATCCCGCCTTTGAAAG...CCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCCCTCATCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp AAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCCAGCAGTGGTGGTCACTGGGGTaGCGTTTCCATTGTAACCGT +
Preference number: 4 (lower is better)
Translates to: KVIATDANRAATRYLCQQWWSLG*RFHCNR
Trigger: ACGGTTACAATGGAAACGCCACCCCAGTGACCACCA...CTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000539291.6
CDS-3UTR CCA 90 bp AGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACCCCACGGGGCAGTGGTaGTCACTGGGGTGGCGTTTC +
Preference number: 4 (lower is better)
Translates to: RQRLQKCSANKVIATDANPTGQW*SLGWRF
Trigger: GAAACGCCACCCCAGTGACCACCACTGCCCCGTGGG...GTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp AGTGCATGCGATGTGCCCGAGGTGTCGGGGCAGGGAGGAGGATTGATCTCGATGCTCCTGAAAATCCGGTaGTTGGTGAAGGCGATGATG +
Preference number: 4 (lower is better)
Translates to: SACDVPEVSGQGGGLISMLLKIR*LVKAMM
Trigger: CATCATCGCCTTCACCAACCACCGGATTTTCAGGAG...CATCGAGATCAATCCTCCTCCCTGCCCCGACACCTCGGGCACATCGCATGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp ATCAGTGTGACCTGGTCTAGGCAAGGCCTTTGCGGCAGACCCAGATCTGACTCACCGAGTGCTTCACCTTaGCCTTCTGGGCAGCGCTTA +
Preference number: 4 (lower is better)
Translates to: ISVTWSRQGLCGRPRSDSPSASP*PSGQRL
Trigger: TAAGCGCTGCCCAGAAGGCCAAGGTGAAGCACTCGG...TGAGTCAGATCTGGGTCTGCCGCAAAGGCCTTGCCTAGACCAGGTCACACTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp CTCCTGAAAATCCGGTGGTTGGTGAAGGCGATGATGGAGAGAGGGATGGCAAAGCAGGAACCACATTGCTaGCCCCAGGACCCCCAACCT +
Preference number: 4 (lower is better)
Translates to: LLKIRWLVKAMMERGMAKQEPHC*PQDPQP
Trigger: AGGTTGGGGGTCCTGGGGCCAGCAATGTGGTTCCTG...CTTTGCCATCCCTCTCTCCATCATCGCCTTCACCAACCACCGGATTTTCAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR CCA 90 bp AGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTCTTCCATGCCCTATGCCCTCCTaGGCGCTGCCACAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SGHGGSGFRNEKLVVCLPCPMPS*ALPQCW
Trigger: CCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCA...TGGAAGACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp AGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCACTGGGCGTGGACATTTaGGGCTCCCCGTTGAGGACG +
Preference number: 4 (lower is better)
Translates to: RNAPQIKSSPLMRTGQPPLGVDI*GSPLRT
Trigger: CGTCCTCAACGGGGAGCCCCAAATGTCCACGCCCAG...TGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp TTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCGACAAAACGAGAGCGTaGCTCAGCCCCACGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LQKCSANKVIATDANRAADKTRA*LSPTAL
Trigger: CAGGGCCGTGGGGCTGAGCCACGCTCTCGTTTTGTC...GGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp TGGGGCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGGGAGGATGGCTGTTTTaGCTGGGTGTGGTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: WGQWSRREWLQEREIGSLGGWLF*LGVVVH
Trigger: GTGCACCACCACACCCAGCCAAAACAGCCATCCTCC...CAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp TCTGCTGTGGCTGTGTCACACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACACTCTCAAGGGGAGGATaGCTGTTTTGGCTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: SAVAVSHLSCQLLFWAWTLSRGG*LFWLGV
Trigger: CACACCCAGCCAAAACAGCCATCCTCCCCTTGAGAG...TGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACAGCCACAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp TGCTGGGTGACCTCCAGCATGGTGCTCACTGACATTCTGAGGCAGGAGCCCAGATGGGGTGGCGTTTCCTaGCATATTTTGCGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: CWVTSSMVLTDILRQEPRWGGVS*HILRVP
Trigger: TGGAACCCGCAAAATATGCCAGGAAACGCCACCCCA...TCTGGGCTCCTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392585.2
3UTR CAA 72 bp TTGGCCTTCTGGGCAGCGCTTAAGCCCATGCTCTGCTaGATGCTCCTGAAAATCCGGTGGTTGGTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: LAFWAALKPMLC*MLLKIRWLVKA
Trigger: CGCCTTCACCAACCACCGGATTTTCAGGAGCATCAAGCAGAGCATGGGCTTAAGCGCTGCCCAGAAGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR TCA 90 bp CACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGCTGGGTTTCTCCGGGTaGGTGTCGTGTCCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: HNAPPHPGNACRNAPQIKLGFSG*VSCPLL
Trigger: GAGCAAGGGACACGACACTCACCCGGAGAAACCCAG...CTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000539291.6
CDS-3UTR TCA 90 bp GCTTTGACGAGGAGAACCAGGTGGTACGGGGCGAAGCAGACTAGGAAGATGACAAAAAGGCAGCGGCTTTaGCGAGGAGAACCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: ALTRRTRWYGAKQTRKMTKRQRL*RGEPGG
Trigger: ACCACCTGGTTCTCCTCGTCAAAGCCGCTGCCTTTT...TGTCATCTTCCTAGTCTGCTTCGCCCCGTACCACCTGGTTCTCCTCGTCAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR GCA 90 bp TGGGGCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGCAAGCTCCCTCCTGTTaGAGCGTGTGCCAGGATTTC +
Preference number: 4 (lower is better)
Translates to: WGQWSRREWLQEREIGSLQAPSC*SVCQDF
Trigger: GAAATCCTGGCACACGCTGCAACAGGAGGGAGCTTG...CAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp AGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTCTTCCATTGCCCTGCAGTACCTaGAGCAGCGCCAGCCACGCA +
Preference number: 4 (lower is better)
Translates to: SGHGGSGFRNEKLVVCLPLPCST*SSASHA
Trigger: TGCGTGGCTGGCGCTGCTGCAGGTACTGCAGGGCAA...TGGAAGACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp CACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGCAGCAGCTCGCAGAGTaGCAGGCAGAGCAGGTAGAC +
Preference number: 4 (lower is better)
Translates to: HNAPPHPGNACRNAPQIKQQLAE*QAEQVD
Trigger: GTCTACCTGCTCTGCCTGGCACTCTGCGAGCTGCTG...CTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTCTTACCGCGATGGCCGAGTaGTTCACCTTGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: ASGHGGSGFRNEKLVVCLTAMAE*FTLAFW
Trigger: CCAGAAGGCCAAGGTGAAGCACTCGGCCATCGCGGT...AAGACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATAGAGGCCCCACTGCCTaGCACATGCTCTCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: ASRQRLQKCSANKVIATDRGPTA*HMLSGL
Trigger: GAGCCCAGAGAGCATGTGGCAGGCAGTGGGGCCTCT...ATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGATGAAGAGGCCCCACTaGCTGCCACATGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: APPHPGNACRNAPQIKSSMKRPH*LPHALW
Trigger: CCAGAGAGCATGTGGCAGGCAGTGGGGCCTCTTCAT...CGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATCTCTGCCAGCAGGCGTaGTACCTGCCCACAGCCAAG +
Preference number: 4 (lower is better)
Translates to: ASRQRLQKCSANKVIATDLCQQA*YLPTAK
Trigger: CTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAG...ATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCACATCCAGGCAACGCTTaGAGAAATGCTCCGCAAATA +
Preference number: 4 (lower is better)
Translates to: EGPQCTTASRQRLQKCSAHPGNA*RNAPQI
Trigger: TATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATG...TGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTCTTGGCACCCCTTGCCTCTaGTGTGGCTGTGTCACACCT +
Preference number: 4 (lower is better)
Translates to: ASGHGGSGFRNEKLVVCLGTPCL*CGCVTP
Trigger: AGGTGTGACACAGCCACAGCAGAGGCAAGGGGTGCC...AAGACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp GGGGCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTTCTAGGCAAGGCCTTTaGGGCAGACCCAGATCTGAC +
Preference number: 4 (lower is better)
Translates to: GASGHGGSGFRNEKLVVCSRQGL*GRPRSD
Trigger: GTCAGATCTGGGTCTGCCGCAAAGGCCTTGCCTAGA...ACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp GCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGTGTGCTCTGAGTGCATaGGATGTGCCCGAGGTGTCG +
Preference number: 4 (lower is better)
Translates to: APPHPGNACRNAPQIKSSCALSA*DVPEVS
Trigger: CGACACCTCGGGCACATCGCATGCACTCAGAGCACA...CGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp TGCTGGGTGACCTCCAGCATGGTGCTCACTGACATTCTGAGGCAGGAGCCCAGAGAGCAACTGCATAGCTaGCTGACAAAACGAGAGCGT +
Preference number: 4 (lower is better)
Translates to: CWVTSSMVLTDILRQEPREQLHS*LTKRER
Trigger: ACGCTCTCGTTTTGTCAGGCAGCTATGCAGTTGCTC...TCTGGGCTCCTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp CACACCGCGCTGTACACCACGACCAGGACTATCCTGCTCTCTTCGAAGGACACGGAGCAACTGCATAGCTaGCTGACAAAACGAGAGCGT +
Preference number: 4 (lower is better)
Translates to: HTALYTTTRTILLSSKDTEQLHS*LTKRER
Trigger: ACGCTCTCGTTTTGTCAGGCAGCTATGCAGTTGCTC...CGTGTCCTTCGAAGAGAGCAGGATAGTCCTGGTCGTGGTGTACAGCGCGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR CCA 90 bp AGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCAAGGGAGCCAGCCAGCTTTCAAAGGCGGGATaGTATTCCATTGTATTCAGT +
Preference number: 4 (lower is better)
Translates to: RYLCQQACYLPTAKGASQLSKAG*YSIVFS
Trigger: ACTGAATACAATGGAATACCATCCCGCCTTTGAAAG...CTGGCTGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp TTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCTTTGTCTCTGTGCGCTaGGCTCCCCTGTCACCTCCC +
Preference number: 4 (lower is better)
Translates to: LQKCSANKVIATDANRAAFVSVR*APLSPP
Trigger: GGGAGGTGACAGGGGAGCCCAGCGCACAGAGACAAA...GGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GATGACTCTCAAGGGGAGGATGGCTGTTTTGGCTGGGTGTGGTGGTGCACACCTATAGATGACCCAGAGTaGCAGCGTGCCTGTGTACAG +
Preference number: 4 (lower is better)
Translates to: DDSQGEDGCFGWVWWCTPIDDPE*QRACVQ
Trigger: CTGTACACAGGCACGCTGCCACTCTGGGTCATCTAT...AGGTGTGCACCACCACACCCAGCCAAAACAGCCATCCTCCCCTTGAGAGTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp ATCAGTGTGACCTGGTCTAGGCAAGGCCTTTGCGGCAGACCCAGATCTGACTCATTCACCTTGGCCTTCTaGGCAGCGCTTAAGCCCATG +
Preference number: 4 (lower is better)
Translates to: ISVTWSRQGLCGRPRSDSFTLAF*AALKPM
Trigger: CATGGGCTTAAGCGCTGCCCAGAAGGCCAAGGTGAA...TGAGTCAGATCTGGGTCTGCCGCAAAGGCCTTGCCTAGACCAGGTCACACTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp GCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCCTCCAAGCCGCACATaGCGTTCCTGTCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: APPHPGNACRNAPQIKSSPPSRT*RSCLLC
Trigger: ACAGAGGAGACAGGAACGCCATGTGCGGCTTGGAGG...CGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACGCCGTTCACCGTaGACAGGCACAGAAACACCA +
Preference number: 4 (lower is better)
Translates to: APPHPGNACRNAPQIKSSPRRSP*TGTETP
Trigger: TGGTGTTTCTGTGCCTGTCCACGGTGAACGGCGTGG...CGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp TGGGGCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGATTCTGGACACTTCTTaGCGGGAATGGTCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: WGQWSRREWLQEREIGSLILDTS*REWSVA
Trigger: GGCCACGGACCATTCCCGCCAAGAAGTGTCCAGAAT...CAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCATTCTGGACACTTCTTaGCGGGAATGGTCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: ANKVIATDANRAATRYLCILDTS*REWSVA
Trigger: GGCCACGGACCATTCCCGCCAAGAAGTGTCCAGAAT...GCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GGAAACCAGGGCATCAGTGTGACCTGGTCTAGGCAAGGCCTTTGCGGCAGACCCACCCCTTATGGATTCTaGACACTTCTTGGCGGGAAT +
Preference number: 4 (lower is better)
Translates to: GNQGISVTWSRQGLCGRPTPYGF*TLLGGN
Trigger: ATTCCCGCCAAGAAGTGTCCAGAATCCATAAGGGGT...GGGTCTGCCGCAAAGGCCTTGCCTAGACCAGGTCACACTGATGCCCTGGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp GCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTCTTGTGGGTGCACGGGCCTaGAGAAGGTGTAGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: ASGHGGSGFRNEKLVVCLVGARA*RRCSGL
Trigger: CAGACCACTACACCTTCTCCAGGCCCGTGCACCCAC...AAGACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp CACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGCAGCCACCTTCCATGTaGGAAAGCCTGGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: HNAPPHPGNACRNAPQIKQPPSM*ESLGPV
Trigger: CACTGGCCCCAGGCTTTCCCACATGGAAGGTGGCTG...CTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GATGACTCTCAAGGGGAGGATGGCTGTTTTGGCTGGGTGTGGTGGTGCACACCTTGCCAACTGTTGTTCTaGGCGTGGACATTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: DDSQGEDGCFGWVWWCTPCQLLF*AWTFGA
Trigger: AGCCCCAAATGTCCACGCCCAGAACAACAGTTGGCA...AGGTGTGCACCACCACACCCAGCCAAAACAGCCATCCTCCCCTTGAGAGTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
3UTR CAA 72 bp GAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTaGCAGAAATGCTCCGCAAATAAAGTCATCGCCACT +
Preference number: 4 (lower is better)
Translates to: EGPQCTTASRQR*QKCSANKVIAT
Trigger: AGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR TCA 90 bp AGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTTGCGGATATAGATaGCCCAGAGTGGCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: RNAPQIKSSPLMRTGQPPGCGYR*PRVAAC
Trigger: GCACGCTGCCACTCTGGGTCATCTATATCCGCAACC...TGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR TCA 90 bp TGCTGGGTGACCTCCAGCATGGTGCTCACTGACATTCTGAGGCAGGAGCCCAGAACAGGAAGAGGATGCTaGCGTAGATGTTGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: CWVTSSMVLTDILRQEPRTGRGC*RRCCRR
Trigger: TCTTCTGCAACATCTACGTCAGCATCCTCTTCCTGT...TCTGGGCTCCTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR TCA 90 bp AGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTCTTCCATGCCACAGTGCTGGGTaGCCTCCAGCATGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: SGHGGSGFRNEKLVVCLPCHSAG*PPAWCS
Trigger: TGAGCACCATGCTGGAGGTCACCCAGCACTGTGGCA...TGGAAGACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR TCA 90 bp TCTTTCCACCCCTTATGGATTCTGGACACTTCTTGGCGGGAATGGTCCGTGGCCAACTGCATAGCTGCCTaGCAAAACGAGAGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: SFHPLWILDTSWREWSVANCIAA*QNESVA
Trigger: AGCCACGCTCTCGTTTTGTCAGGCAGCTATGCAGTT...GGCCACGGACCATTCCCGCCAAGAAGTGTCCAGAATCCATAAGGGGTGGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR GCA 90 bp AAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCCAGCAGACATTCACATTCTTCTaGAACCATCGCCAGCATCCG +
Preference number: 4 (lower is better)
Translates to: KVIATDANRAATRYLCQQTFTFF*NHRQHP
Trigger: CGGATGCTGGCGATGGTTGCAGAAGAATGTGAATGT...CTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp AGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACAGACGGCCAGCACGTTaGCCTGCAGTACCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: RQRLQKCSANKVIATDANRRPAR*PAVPAA
Trigger: TGCTGCAGGTACTGCAGGGCAACGTGCTGGCCGTCT...GTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp AGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTCTTCCAAGACGGCCAGCACGTTaGCCTGCAGTACCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: SGHGGSGFRNEKLVVCLPRRPAR*PAVPAA
Trigger: TGCTGCAGGTACTGCAGGGCAACGTGCTGGCCGTCT...TGGAAGACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GGGGCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTAGTACCCGGCAATCCTaGTGTCCATCTGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: GASGHGGSGFRNEKLVVCSTRQS*CPSAAC
Trigger: ACATGCTGCAGATGGACAGCAGGATTGCCGGGTACT...ACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp TGGGGCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGAGTACCCGGCAATCCTaGTGTCCATCTGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: WGQWSRREWLQEREIGSLSTRQS*CPSAAC
Trigger: ACATGCTGCAGATGGACAGCAGGATTGCCGGGTACT...CAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp AGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACCTCCTCCCCTTGGCATaGAGCCACCTTCCATGTGGG +
Preference number: 4 (lower is better)
Translates to: RQRLQKCSANKVIATDANLLPLA*SHLPCG
Trigger: CCCACATGGAAGGTGGCTGCATGCCAAGGGGAGGAG...GTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp CACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGATGAAGAGGCCCCACTaGCTGCCACATGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: HNAPPHPGNACRNAPQIKMKRPH*LPHALW
Trigger: CCAGAGAGCATGTGGCAGGCAGTGGGGCCTCTTCAT...CTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGGTGTCACACCTGTCCTaGCAACTGTTGTTCTGGGCG +
Preference number: 4 (lower is better)
Translates to: APPHPGNACRNAPQIKSSVSHLS*QLLFWA
Trigger: CGCCCAGAACAACAGTTGGCAGGACAGGTGTGACAC...CGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp GCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCGACAGGCGTGAGCACTaGCCTGCCTTGTGCTTTTAT +
Preference number: 4 (lower is better)
Translates to: ANKVIATDANRAATRYLCDRREH*PALCFY
Trigger: ATAAAAGCACAAGGCAGGGCAGTGCTCACGCCTGTC...GCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp AGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACCCTCGCTGCGCTTGCTaGGTTTCTCCGGGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: RQRLQKCSANKVIATDANPRCAC*VSPGEC
Trigger: ACACTCACCCGGAGAAACCCAGCAAGCGCAGCGAGG...GTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000539291.6
CDS-3UTR CCA 90 bp AGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACACCTCCCCACGTGGGTaGGCATCTCTGCGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: RQRLQKCSANKVIATDANTSPRG*ASLRVF
Trigger: GAAGACACGCAGAGATGCCCACCCACGTGGGGAGGT...GTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp AGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACTGTCACCTCCCCACGTaGGTGGGCATCTCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: RQRLQKCSANKVIATDANCHLPT*VGISAC
Trigger: ACACGCAGAGATGCCCACCCACGTGGGGAGGTGACA...GTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTCTTCCGAGTGCTTCACCTTaGCCTTCTGGGCAGCGCTTA +
Preference number: 4 (lower is better)
Translates to: ASGHGGSGFRNEKLVVCLPSASP*PSGQRL
Trigger: TAAGCGCTGCCCAGAAGGCCAAGGTGAAGCACTCGG...AAGACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp TTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCACGAGGAGAACCAGGTaGTACGGGGCGAAGCAGACT +
Preference number: 4 (lower is better)
Translates to: LQKCSANKVIATDANRAATRRTR*YGAKQT
Trigger: AGTCTGCTTCGCCCCGTACCACCTGGTTCTCCTCGT...GGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTCTTCCTCCAAGCCGCACATaGCGTTCCTGTCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: ASGHGGSGFRNEKLVVCLPPSRT*RSCLLC
Trigger: ACAGAGGAGACAGGAACGCCATGTGCGGCTTGGAGG...AAGACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp AGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACTCGGTGTCCCTGCTGTaGGTGAGCCTGGTGACGTCT +
Preference number: 4 (lower is better)
Translates to: RQRLQKCSANKVIATDANSVSLL*VSLVTS
Trigger: AGACGTCACCAGGCTCACCCACAGCAGGGACACCGA...GTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GGGGCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTTGCCAACTGTTGTTCTaGGCGTGGACATTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: GASGHGGSGFRNEKLVVCCQLLF*AWTFGA
Trigger: AGCCCCAAATGTCCACGCCCAGAACAACAGTTGGCA...ACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp AGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTCTTCCAGAGGGTGCAGGGAGCTaGCTTTCTCCGCCAGACAAG +
Preference number: 4 (lower is better)
Translates to: SGHGGSGFRNEKLVVCLPEGAGS*LSPPDK
Trigger: CTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTC...TGGAAGACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp GCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTCTTGGAGGATGGCTGTTTTaGCTGGGTGTGGTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: ASGHGGSGFRNEKLVVCLGGWLF*LGVVVH
Trigger: GTGCACCACCACACCCAGCCAAAACAGCCATCCTCC...AAGACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp CTGCCACAGTGCTGGGTGACCTCCAGCATGGTGCTCACTGACATTCTGAGGCAGCTGAGTTCATGCTTCTaGGCCTTCTGTGGTTACAGA +
Preference number: 4 (lower is better)
Translates to: LPQCWVTSSMVLTDILRQLSSCF*AFCGYR
Trigger: TCTGTAACCACAGAAGGCCCAGAAGCATGAACTCAG...CTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCACTGTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR CAA 72 bp AGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATaGGTAGTTTGTCTTCCAGAGGGGACATGGGCACTG +
Preference number: 4 (lower is better)
Translates to: SGHGGSGFRNEK*VVCLPEGTWAL
Trigger: CAGTGCCCATGTCCCCTCTGGAAGACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR TCA 90 bp TTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCAAAAGGCAGCGGCTTTaGCGAGGAGAACCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: LQKCSANKVIATDANRAAKRQRL*RGEPGG
Trigger: ACCACCTGGTTCTCCTCGTCAAAGCCGCTGCCTTTT...GGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp AGTGCATGCGATGTGCCCGAGGTGTCGGGGCAGGGAGGAGGATTGATCTCGATGTCTAAGTACATGTCATaGGTCTTGTCGGTCCTATCA +
Preference number: 4 (lower is better)
Translates to: SACDVPEVSGQGGGLISMSKYMS*VLSVLS
Trigger: TGATAGGACCGACAAGACGCATGACATGTACTTAGA...CATCGAGATCAATCCTCCTCCCTGCCCCGACACCTCGGGCACATCGCATGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000392585.2
CDS-3UTR GCA 90 bp AGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTCTTCCATGTGCTCTGAGTGCATaGGATGTGCCCGAGGTGTCG +
Preference number: 4 (lower is better)
Translates to: SGHGGSGFRNEKLVVCLPCALSA*DVPEVS
Trigger: CGACACCTCGGGCACATCGCATGCACTCAGAGCACA...TGGAAGACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp GCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGTCTGCCCGGCTCTGTaGTCTGAGTGCATGCGATGT +
Preference number: 4 (lower is better)
Translates to: ASRQRLQKCSANKVIATDVCPAL*SECMRC
Trigger: ACATCGCATGCACTCAGAGCACAGAGCCGGGCAGAC...ATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp AGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTCTTCCAAGGTCACGCAGGGTGTaGAGTGGTGTGACTTCCCCA +
Preference number: 4 (lower is better)
Translates to: SGHGGSGFRNEKLVVCLPRSRRV*SGVTSP
Trigger: TGGGGAAGTCACACCACTGCACACCCTGCGTGACCT...TGGAAGACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR CCA 90 bp CACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGGGTCAGACCCACAGTTaGCATTGCTGGATCTCACGG +
Preference number: 4 (lower is better)
Translates to: HNAPPHPGNACRNAPQIKGQTHS*HCWISR
Trigger: CCGTGAGATCCAGCAATGCCAACTGTGGGTCTGACC...CTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000539291.6
CDS-3UTR CCA 90 bp AGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACCCGAGTGCTTCACCTTaGCCTTCTGGGCAGCGCTTA +
Preference number: 4 (lower is better)
Translates to: RQRLQKCSANKVIATDANPSASP*PSGQRL
Trigger: TAAGCGCTGCCCAGAAGGCCAAGGTGAAGCACTCGG...GTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATACGAGGAGAACCAGGTaGTACGGGGCGAAGCAGACT +
Preference number: 4 (lower is better)
Translates to: ASRQRLQKCSANKVIATDTRRTR*YGAKQT
Trigger: AGTCTGCTTCGCCCCGTACCACCTGGTTCTCCTCGT...ATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp TTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCATTCTGGACACTTCTTaGCGGGAATGGTCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: LQKCSANKVIATDANRAAILDTS*REWSVA
Trigger: GGCCACGGACCATTCCCGCCAAGAAGTGTCCAGAAT...GGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp CTGCCACAGTGCTGGGTGACCTCCAGCATGGTGCTCACTGACATTCTGAGGCAGTCTTTCCACCCCTTATaGATTCTGGACACTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LPQCWVTSSMVLTDILRQSFHPL*ILDTSW
Trigger: CCAAGAAGTGTCCAGAATCCATAAGGGGTGGAAAGA...CTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCACTGTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp TGGGGCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTGTGGTTACAGATCATaGAGTCCCACCTCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: WGQWSRREWLQEREIGSLCGYRS*SPTSRS
Trigger: TGACCTGGAGGTGGGACTCCATGATCTGTAACCACA...CAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
3UTR CAA 72 bp CCACTCTTTCCACCCCTTATGGATTCTGGACACTTCTaGGCGGGAATGGTCCGTGGCCAGCACGTAGATAAT +
Preference number: 4 (lower is better)
Translates to: PLFPPLMDSGHF*AGMVRGQHVDN
Trigger: ATTATCTACGTGCTGGCCACGGACCATTCCCGCCAAGAAGTGTCCAGAATCCATAAGGGGTGGAAAGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR TCA 90 bp GCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATCCTCTGTGCCTTAGCTaGGCTGCTGAGAATGACGGT +
Preference number: 4 (lower is better)
Translates to: ASRQRLQKCSANKVIATDPLCLS*AAENDG
Trigger: ACCGTCATTCTCAGCAGCTCAGCTAAGGCACAGAGG...ATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000539291.6
CDS-3UTR TCA 90 bp CTGCCACAGTGCTGGGTGACCTCCAGCATGGTGCTCACTGACATTCTGAGGCAGTCAAGACGTTCACTCTaGGAGTTTAAAATGACCTCG +
Preference number: 4 (lower is better)
Translates to: LPQCWVTSSMVLTDILRQSRRSL*EFKMTS
Trigger: CGAGGTCATTTTAAACTCTCAGAGTGAACGTCTTGA...CTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCACTGTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539291.6
CDS-3UTR GCA 90 bp GCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATCAAGCTCCCTCCTGTTaGAGCGTGTGCCAGGATTTC +
Preference number: 4 (lower is better)
Translates to: ASRQRLQKCSANKVIATDQAPSC*SVCQDF
Trigger: GAAATCCTGGCACACGCTGCAACAGGAGGGAGCTTG...ATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp CACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGCGACCAGGACTATCCTaGTCTCTTCGAAGGACACGT +
Preference number: 4 (lower is better)
Translates to: HNAPPHPGNACRNAPQIKRPGLS*SLRRTR
Trigger: ACGTGTCCTTCGAAGAGAGCAGGATAGTCCTGGTCG...CTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp AGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACTCTAGGCAAGGCCTTTaGGGCAGACCCAGATCTGAC +
Preference number: 4 (lower is better)
Translates to: RQRLQKCSANKVIATDANSRQGL*GRPRSD
Trigger: GTCAGATCTGGGTCTGCCGCAAAGGCCTTGCCTAGA...GTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR GCA 90 bp AGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGACAGGCGTGAGCACTaGCCTGCCTTGTGCTTTTAT +
Preference number: 4 (lower is better)
Translates to: RNAPQIKSSPLMRTGQPPDRREH*PALCFY
Trigger: ATAAAAGCACAAGGCAGGGCAGTGCTCACGCCTGTC...TGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp AGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTCTTCCATGCTTTCCGTTCTCCTaGGTCAGACCCACAGTTGGC +
Preference number: 4 (lower is better)
Translates to: SGHGGSGFRNEKLVVCLPCFPFS*VRPTVG
Trigger: GCCAACTGTGGGTCTGACCCAGGAGAACGGAAAGCA...TGGAAGACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000539291.6
CDS-3UTR GCA 90 bp GCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCCTTAAGCCCATGCTCTaGTTGATGCTCCTGAAAATC +
Preference number: 4 (lower is better)
Translates to: ANKVIATDANRAATRYLCLKPML*LMLLKI
Trigger: GATTTTCAGGAGCATCAAGCAGAGCATGGGCTTAAG...GCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp AGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTCTTCCAGACAGGCGTGAGCACTaGCCTGCCTTGTGCTTTTAT +
Preference number: 4 (lower is better)
Translates to: SGHGGSGFRNEKLVVCLPDRREH*PALCFY
Trigger: ATAAAAGCACAAGGCAGGGCAGTGCTCACGCCTGTC...TGGAAGACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CCA 90 bp AGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCACTCCTGAAAATCCGGTaGTTGGTGAAGGCGATGATG +
Preference number: 4 (lower is better)
Translates to: RNAPQIKSSPLMRTGQPPLLKIR*LVKAMM
Trigger: CATCATCGCCTTCACCAACCACCGGATTTTCAGGAG...TGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR TCA 90 bp TGGGGCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTCAAGACGTTCACTCTaGGAGTTTAAAATGACCCAG +
Preference number: 4 (lower is better)
Translates to: WGQWSRREWLQEREIGSLSRRSL*EFKMTQ
Trigger: CTGGGTCATTTTAAACTCTCAGAGTGAACGTCTTGA...CAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000392585.2
CDS-3UTR TCA 90 bp TTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCACAGGAAGAGGATGCTaGCGTAGATGTTGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: LQKCSANKVIATDANRAATGRGC*RRCCRR
Trigger: TCTTCTGCAACATCTACGTCAGCATCCTCTTCCTGT...GGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR TCA 90 bp AGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAACAGGAAGAGGATGCTaGCGTAGATGTTGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: RNAPQIKSSPLMRTGQPPTGRGC*RRCCRR
Trigger: TCTTCTGCAACATCTACGTCAGCATCCTCTTCCTGT...TGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp TTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCACATTCACATTCTTCTaGAACCATCGCCAGCATCCG +
Preference number: 4 (lower is better)
Translates to: LQKCSANKVIATDANRAATFTFF*NHRQHP
Trigger: CGGATGCTGGCGATGGTTGCAGAAGAATGTGAATGT...GGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp GGGGCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTCAACGCTTGCAGAAATaGTCCGCAAATAAAGTCATC +
Preference number: 4 (lower is better)
Translates to: GASGHGGSGFRNEKLVVCQRLQK*SANKVI
Trigger: GATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTG...ACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp CACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGCATCCAGGCAACGCTTaGAGAAATGCTCCGCAAATA +
Preference number: 4 (lower is better)
Translates to: HNAPPHPGNACRNAPQIKHPGNA*RNAPQI
Trigger: TATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATG...CTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp CTGGGGTGGCGTTTCCTCAAACACAGCTCTCCGAGGTCAGAAACTCATCCTTTCAAAGAGACAAGATTTTaGCATGTTGCCGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LGWRFLKHSSPRSETHPFKETRF*HVAEAG
Trigger: ACCAGCCTCGGCAACATGGCAAAATCTTGTCTCTTT...GAAAGGATGAGTTTCTGACCTCGGAGAGCTGTGTTTGAGGAAACGCCACCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR GCA 90 bp CGTCTGTCTTCATGGACCACTCTTTCCACCCCTTATGGATTCTGGACACTTCTTCTCTGGCTGAGTTCATaGTTCTGGGCCTTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: RLSSWTTLSTPYGFWTLLLWLSS*FWAFCG
Trigger: ACCACAGAAGGCCCAGAAGCATGAACTCAGCCAGAG...AAGAAGTGTCCAGAATCCATAAGGGGTGGAAAGAGTGGTCCATGAAGACAGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR CCA 90 bp TTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCCCTTATGGATTCTaGACACTTCTTGGCGGGAAT +
Preference number: 4 (lower is better)
Translates to: LQKCSANKVIATDANRAATPYGF*TLLGGN
Trigger: ATTCCCGCCAAGAAGTGTCCAGAATCCATAAGGGGT...GGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CCA 90 bp GCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTCTTTCTTTCCACCCCTTATaGATTCTGGACACTTCTTGG +
Preference number: 4 (lower is better)
Translates to: ASGHGGSGFRNEKLVVCLSFHPL*ILDTSW
Trigger: CCAAGAAGTGTCCAGAATCCATAAGGGGTGGAAAGA...AAGACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp AGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTCTTCCACTTAAGCCCATGCTCTaGTTGATGCTCCTGAAAATC +
Preference number: 4 (lower is better)
Translates to: SGHGGSGFRNEKLVVCLPLKPML*LMLLKI
Trigger: GATTTTCAGGAGCATCAAGCAGAGCATGGGCTTAAG...TGGAAGACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR GCA 90 bp AGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTCTTCCACAACGCTTGCAGAAATaGTCCGCAAATAAAGTCATC +
Preference number: 4 (lower is better)
Translates to: SGHGGSGFRNEKLVVCLPQRLQK*SANKVI
Trigger: GATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTG...TGGAAGACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp GCAGTACCTGCAGCAGCGCCAGCCACGCAGTCAGGCAGTTGGCCGGCACCCCCACACGCAGTCAGGCAGTaGGCCGGCACCCCCAGCGTG +
Preference number: 5 (lower is better)
Translates to: AVPAAAPATQSGSWPAPPHAVRQ*AGTPSV
Trigger: CACGCTGGGGGTGCCGGCCAACTGCCTGACTGCGTG...TGGGGGTGCCGGCCAACTGCCTGACTGCGTGGCTGGCGCTGCTGCAGGTACTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR CAA 90 bp GGCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACGTTGTTGCAGGTCTaGGCGGAGAGGCCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: GACPLGGGRLPYALLGAATLLQV*AERPRE
Trigger: CTCCCTGGGCCTCTCCGCCAAGACCTGCAACAACGT...GGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp GTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCCAGCGCACTCGCTCCGCATTaGCTCCCAGCCCCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: VGCPMPSWALPQCWVTSSALAPH*LPAPRP
Trigger: AGGCCTGGGGGCTGGGAGCAAATGCGGAGCGAGTGC...GCTGGAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp CCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCAACTGCTGCACGCAGTCAGGCAGTaGGCCGGCACCCCCAGCGTG +
Preference number: 5 (lower is better)
Translates to: PRGCRELAFSARQAGQLLHAVRQ*AGTPSV
Trigger: CACGCTGGGGGTGCCGGCCAACTGCCTGACTGCGTG...CAGCAGTTGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CAA 90 bp GCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCAGCCGAGTGCTTCACCTaGGCCTTCTGGGCAGCGCTT +
Preference number: 5 (lower is better)
Translates to: APAPLEVVGCPMPSWALPAECFT*AFWAAL
Trigger: AAGCGCTGCCCAGAAGGCCAAGGTGAAGCACTCGGC...TGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp GGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCATTTGGGGCTCCCCGTaGAGGACGCCTGGGCTGCGC +
Preference number: 5 (lower is better)
Translates to: GGRLPYALLGAATVLGDLIWGSP*RTPGLR
Trigger: GCGCAGCCCAGGCGTCCTCAACGGGGAGCCCCAAAT...GAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CAA 90 bp TCTGACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCACGCAGTCAGGCAGTaGGCCGGCACCCCCAGCGTG +
Preference number: 5 (lower is better)
Translates to: SDSAPRVQGAGFLRQTSRHAVRQ*AGTPSV
Trigger: CACGCTGGGGGTGCCGGCCAACTGCCTGACTGCGTG...CCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CAA 90 bp GGCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCGAAAAGGCAGCGGCTTaGACGAGGAGAACCAGGTGG +
Preference number: 5 (lower is better)
Translates to: GACPLGGGRLPYALLGAAEKAAA*TRRTRW
Trigger: CCACCTGGTTCTCCTCGTCAAAGCCGCTGCCTTTTC...GGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS CCA 90 bp GCGGTGTGCAGGGCTCCGGTCTCCCCACAGCCTCGCTGCGCTTGCTaGGTTTCTCCGGGTGAGTGTCGTGTCCCTTGCTCACCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: AVCRAPVSPQPRCAC*VSPGECRVPCSPSS
Trigger: GGAGGAAGGTGAGCAAGGGACACGACACTCACCCGGAGAAACCCAGCAAGCGCAGCGAGGCTGTGGGGAGACCGGAGCCCTGCACACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
CDS-3UTR CAA 90 bp GCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCATCGAAGGACACGTTGTaGCAGGTCTTGGCGGAGAGG +
Preference number: 5 (lower is better)
Translates to: APAPLEVVGCPMPSWALPSKDTL*QVLAER
Trigger: CCTCTCCGCCAAGACCTGCAACAACGTGTCCTTCGA...TGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp CAGATGAGGGCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGTCTGGGCGTGGACATTaGGGGCTCCCCGTTGAGGAC +
Preference number: 5 (lower is better)
Translates to: QMRAPAPLEVVGCPMPSWSGRGH*GLPVED
Trigger: GTCCTCAACGGGGAGCCCCAAATGTCCACGCCCAGA...CCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCCCTCATCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CAA 90 bp GGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCCAGGACTCCTGGCACCCCTaGCCTCTGCTGTGGCTGTGT +
Preference number: 5 (lower is better)
Translates to: GRLPYALLGAATVLGDLQDSWHP*PLLWLC
Trigger: ACACAGCCACAGCAGAGGCAAGGGGTGCCAGGAGTC...CTGGAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CAA 90 bp GCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCGATTCTGGACACTTCTaGGCGGGAATGGTCCGTGGC +
Preference number: 5 (lower is better)
Translates to: APLEVVGCPMPSWALPQCDSGHF*AGMVRG
Trigger: GCCACGGACCATTCCCGCCAAGAAGTGTCCAGAATC...GCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS GCA 90 bp GTGCGCTGGGCTCCCCTGTCACCTCCCCACGTGGGTGGGCATCTCTaGGTGTCTTCAGCGTGTGTCCTTCCGTGTCTCACGTGCTCCACT +
Preference number: 5 (lower is better)
Translates to: VRWAPLSPPHVGGHL*VSSACVLPCLTCST
Trigger: AGTGGAGCACGTGAGACACGGAAGGACACACGCTGAAGACACGCAGAGATGCCCACCCACGTGGGGAGGTGACAGGGGAGCCCAGCGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
ENST00000551869.1
CDS-3UTR CAA 90 bp GTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCCAGCTCGAAGGACACGTTGTaGCAGGTCTTGGCGGAGAGG +
Preference number: 5 (lower is better)
Translates to: VGCPMPSWALPQCWVTSSSKDTL*QVLAER
Trigger: CCTCTCCGCCAAGACCTGCAACAACGTGTCCTTCGA...GCTGGAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp CTGCCACAGTGCTGGGTGACCTCCAGCATGGTGCTCACTGACATTCTGAGGCAGCACGCAGTCAGGCAGTaGGCCGGCACCCCCAGCGTG +
Preference number: 5 (lower is better)
Translates to: LPQCWVTSSMVLTDILRQHAVRQ*AGTPSV
Trigger: CACGCTGGGGGTGCCGGCCAACTGCCTGACTGCGTG...CTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCACTGTGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp CCAACCCCAGATGAGGGCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCGAAAAGGCAGCGGCTTaGACGAGGAGAACCAGGTGG +
Preference number: 5 (lower is better)
Translates to: PTPDEGACPLGGGRLPYAEKAAA*TRRTRW
Trigger: CCACCTGGTTCTCCTCGTCAAAGCCGCTGCCTTTTC...GGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCCCTCATCTGGGGTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp GTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCCAGCGATTCTGGACACTTCTaGGCGGGAATGGTCCGTGGC +
Preference number: 5 (lower is better)
Translates to: VGCPMPSWALPQCWVTSSDSGHF*AGMVRG
Trigger: GCCACGGACCATTCCCGCCAAGAAGTGTCCAGAATC...GCTGGAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp CAGATGAGGGCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGCCTCAATCAGCCTCTTaGCAGGGCATGGTGACCCTG +
Preference number: 5 (lower is better)
Translates to: QMRAPAPLEVVGCPMPSWPQSAS*QGMVTL
Trigger: CAGGGTCACCATGCCCTGCAAAGAGGCTGATTGAGG...CCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCCCTCATCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp GGAAACCAGGGCATCAGTGTGACCTGGTCTAGGCAAGGCCTTTGCGGCAGACCCATTTGGGGCTCCCCGTaGAGGACGCCTGGGCTGCGC +
Preference number: 5 (lower is better)
Translates to: GNQGISVTWSRQGLCGRPIWGSP*RTPGLR
Trigger: GCGCAGCCCAGGCGTCCTCAACGGGGAGCCCCAAAT...GGGTCTGCCGCAAAGGCCTTGCCTAGACCAGGTCACACTGATGCCCTGGTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CAA 90 bp GACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCAGGGAGGATGGCTGTTTaGGCTGGGTGTGGTGGTGCA +
Preference number: 5 (lower is better)
Translates to: DSAPRVQGAGFLRQTSRPGRMAV*AGCGGA
Trigger: TGCACCACCACACCCAGCCAAAACAGCCATCCTCCC...TGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CAA 90 bp CCAACCCCAGATGAGGGCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCTCTTCGAAGGACACGTaGTTGCAGGTCTTGGCGGAG +
Preference number: 5 (lower is better)
Translates to: PTPDEGACPLGGGRLPYASSKDT*LQVLAE
Trigger: CTCCGCCAAGACCTGCAACAACGTGTCCTTCGAAGA...GGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCCCTCATCTGGGGTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp AACAGGGCAGCCACCAGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCGAAAAGGCAGCGGCTTaGACGAGGAGAACCAGGTGG +
Preference number: 5 (lower is better)
Translates to: NRAATRYLCQQACYLPTAEKAAA*TRRTRW
Trigger: CCACCTGGTTCTCCTCGTCAAAGCCGCTGCCTTTTC...GGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp CTGCCACAGTGCTGGGTGACCTCCAGCATGGTGCTCACTGACATTCTGAGGCAGATTTGGGGCTCCCCGTaGAGGACGCCTGGGCTGCGC +
Preference number: 5 (lower is better)
Translates to: LPQCWVTSSMVLTDILRQIWGSP*RTPGLR
Trigger: GCGCAGCCCAGGCGTCCTCAACGGGGAGCCCCAAAT...CTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCACTGTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CAA 90 bp GCAGTACCTGCAGCAGCGCCAGCCACGCAGTCAGGCAGTTGGCCGGCACCCCCACTGTCCTGCCAACTGTaGTTCTGGGCGTGGACATTT +
Preference number: 5 (lower is better)
Translates to: AVPAAAPATQSGSWPAPPLSCQL*FWAWTF
Trigger: AAATGTCCACGCCCAGAACAACAGTTGGCAGGACAG...TGGGGGTGCCGGCCAACTGCCTGACTGCGTGGCTGGCGCTGCTGCAGGTACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS CCA 90 bp TCCACTGTGCCCTTCCATCTTGAGCAATCCTGCACGTGTGGCGTGTaGCGTGTGGCGTGTGGCGTGTTCTGCTCAGCCACGACTCCGCTG +
Preference number: 5 (lower is better)
Translates to: STVPFHLEQSCTCGV*RVACGVFCSATTPL
Trigger: CAGCGGAGTCGTGGCTGAGCAGAACACGCCACACGCCACACGCCACACGCCACACGTGCAGGATTGCTCAAGATGGAAGGGCACAGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
CDS CCA 90 bp CTTTGTCTCTGTGCGCTGGGCTCCCCTGTCACCTCCCCACGTGGGTaGGCATCTCTGCGTGTCTTCAGCGTGTGTCCTTCCGTGTCTCAC +
Preference number: 5 (lower is better)
Translates to: LCLCALGSPVTSPRG*ASLRVFSVCPSVSH
Trigger: GTGAGACACGGAAGGACACACGCTGAAGACACGCAGAGATGCCCACCCACGTGGGGAGGTGACAGGGGAGCCCAGCGCACAGAGACAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
ENST00000551869.1
CDS CCA 90 bp TCCACTTTGTCTCTGTGCGCTGGGCTCCCCTGTCACCTCCCCACGTaGGTGGGCATCTCTGCGTGTCTTCAGCGTGTGTCCTTCCGTGTC +
Preference number: 5 (lower is better)
Translates to: STLSLCAGLPCHLPT*VGISACLQRVSFRV
Trigger: GACACGGAAGGACACACGCTGAAGACACGCAGAGATGCCCACCCACGTGGGGAGGTGACAGGGGAGCCCAGCGCACAGAGACAAAGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
ENST00000551869.1
CDS CCA 90 bp TCCTTTCCAGCCAGGGGGTTGCTAGAGGTCACGCAGGGTGTGCAGTaGTGTGACTTCCCCAAGCTCTGCCAGCGCCACCAGCTCCAGTGT +
Preference number: 5 (lower is better)
Translates to: SFPARGLLEVTQGVQ*CDFPKLCQRHQLQC
Trigger: ACACTGGAGCTGGTGGCGCTGGCAGAGCTTGGGGAAGTCACACCACTGCACACCCTGCGTGACCTCTAGCAACCCCCTGGCTGGAAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR CAA 90 bp GGCAGGAGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGCTGTGCCCTTCCATCTaGAGCAATCCTGCACGTGTG +
Preference number: 5 (lower is better)
Translates to: GRSPEGPQCTTASRQRLQLCPSI*SNPARV
Trigger: CACACGTGCAGGATTGCTCAAGATGGAAGGGCACAG...CTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCTCCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000539291.6
CDS-3UTR CAA 90 bp TCTGTAGTAGGAAAAGGCAGCGGCTTTGACGAGGAGAACCAGGTGGTACGGGGCGCACTCGCTCCGCATTaGCTCCCAGCCCCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: SVVGKGSGFDEENQVVRGALAPH*LPAPRP
Trigger: AGGCCTGGGGGCTGGGAGCAAATGCGGAGCGAGTGC...GCCCCGTACCACCTGGTTCTCCTCGTCAAAGCCGCTGCCTTTTCCTACTACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR CAA 90 bp AAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCCAGCAGGACGTTGTTGCAGGTCTaGGCGGAGAGGCCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: KSSPLMRTGQPPGTSASRTLLQV*AERPRE
Trigger: CTCCCTGGGCCTCTCCGCCAAGACCTGCAACAACGT...CCTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp TCTGACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGTCGAAGGACACGTTGTaGCAGGTCTTGGCGGAGAGG +
Preference number: 5 (lower is better)
Translates to: SDSAPRVQGAGFLRQTSRSKDTL*QVLAER
Trigger: CCTCTCCGCCAAGACCTGCAACAACGTGTCCTTCGA...CCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CAA 90 bp AGGCAGGCTGCTGATGAAGAGGCCCCACTGCCTGCCACATGCTCTCTGGGCTCCTCGAAGGACACGTTGTaGCAGGTCTTGGCGGAGAGG +
Preference number: 5 (lower is better)
Translates to: RQAADEEAPLPATCSLGSSKDTL*QVLAER
Trigger: CCTCTCCGCCAAGACCTGCAACAACGTGTCCTTCGA...GGAGCCCAGAGAGCATGTGGCAGGCAGTGGGGCCTCTTCATCAGCAGCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp AACAGGGCAGCCACCAGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCTCTTCGAAGGACACGTaGTTGCAGGTCTTGGCGGAG +
Preference number: 5 (lower is better)
Translates to: NRAATRYLCQQACYLPTASSKDT*LQVLAE
Trigger: CTCCGCCAAGACCTGCAACAACGTGTCCTTCGAAGA...GGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp CCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGCTGAAAATCCGGTGGTaGGTGAAGGCGATGATGGAG +
Preference number: 5 (lower is better)
Translates to: PLEVVGCPMPSWALPQCWLKIRW*VKAMME
Trigger: CTCCATCATCGCCTTCACCAACCACCGGATTTTCAG...CCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp GGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACAAGCCCATGCTCTGCTaGATGCTCCTGAAAATCCGG +
Preference number: 5 (lower is better)
Translates to: GGGRLPYALLGAATVLGDKPMLC*MLLKIR
Trigger: CCGGATTTTCAGGAGCATCAAGCAGAGCATGGGCTT...GTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp GGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACGCATCCAGGCAACGCTaGCAGAAATGCTCCGCAAAT +
Preference number: 5 (lower is better)
Translates to: GGGRLPYALLGAATVLGDASRQR*QKCSAN
Trigger: ATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGC...GTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp GCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCAGGGCGCCTGCCCCCTaGGAGGTGGTAGGCTGCCCT +
Preference number: 5 (lower is better)
Translates to: ANKVIATDANRAATRYLCRAPAP*EVVGCP
Trigger: AGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCCCT...GCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp GGGGCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTAGGGCGCCTGCCCCCTaGGAGGTGGTAGGCTGCCCT +
Preference number: 5 (lower is better)
Translates to: GASGHGGSGFRNEKLVVCRAPAP*EVVGCP
Trigger: AGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCCCT...ACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp GAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCATCTGGGCGTGGACATTaGGGGCTCCCCGTTGAGGAC +
Preference number: 5 (lower is better)
Translates to: EGPQCTTASRQRLQKCSASGRGH*GLPVED
Trigger: GTCCTCAACGGGGAGCCCCAAATGTCCACGCCCAGA...TGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CAA 90 bp CCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGCTGTCCTGCCAACTGTaGTTCTGGGCGTGGACATTT +
Preference number: 5 (lower is better)
Translates to: PLEVVGCPMPSWALPQCWLSCQL*FWAWTF
Trigger: AAATGTCCACGCCCAGAACAACAGTTGGCAGGACAG...CCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS TCA 90 bp TCCGGTCTCCCCACAGCCTCGCTGCGCTTGCTGGGTTTCTCCGGGTaGGTGTCGTGTCCCTTGCTCACCTTCCTCCCTGGCATATTTTGC +
Preference number: 5 (lower is better)
Translates to: SGLPTASLRLLGFSG*VSCPLLTFLPGIFC
Trigger: GCAAAATATGCCAGGGAGGAAGGTGAGCAAGGGACACGACACTCACCCGGAGAAACCCAGCAAGCGCAGCGAGGCTGTGGGGAGACCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
CDS GCA 90 bp CTTCCCAAACGGAGACTCTGCCCCAGGAAGCACTCGCTCCGCATTTaGTCCCAGCCCCCAGGCCTCCATTCCACTTTGTCTCTGTGCGCT +
Preference number: 5 (lower is better)
Translates to: LPKRRLCPRKHSLRI*SQPPGLHSTLSLCA
Trigger: AGCGCACAGAGACAAAGTGGAATGGAGGCCTGGGGGCTGGGAGCAAATGCGGAGCGAGTGCTTCCTGGGGCAGAGTCTCCGTTTGGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
ENST00000551869.1
CDS CCA 90 bp TCCCTGCTTTCCGTTCTCCTGGGTCAGACCCACAGTTGGCATTGCTaGATCTCACGGCAGTTCCGTCTCATCTCGTGGGGTGCCTCCGCG +
Preference number: 5 (lower is better)
Translates to: SLLSVLLGQTHSWHC*ISRQFRLISWGASA
Trigger: CGCGGAGGCACCCCACGAGATGAGACGGAACTGCCGTGAGATCCAGCAATGCCAACTGTGGGTCTGACCCAGGAGAACGGAAAGCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
CDS-3UTR CAA 90 bp AGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCAAGGGAGCCAGCCAGCCTCCCTGGCATATTTaGCGGGTTCCAATCTCAGTG +
Preference number: 5 (lower is better)
Translates to: RYLCQQACYLPTAKGASQPPWHI*RVPISV
Trigger: CACTGAGATTGGAACCCGCAAAATATGCCAGGGAGG...CTGGCTGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000539291.6
CDS-3UTR CAA 90 bp AGGCAGGAGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCATCTTCGAAGGACACGTaGTTGCAGGTCTTGGCGGAG +
Preference number: 5 (lower is better)
Translates to: RQEPRGPTMHHRIQATLASSKDT*LQVLAE
Trigger: CTCCGCCAAGACCTGCAACAACGTGTCCTTCGAAGA...TGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCTCCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp ACCAGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCAAGGGAGCCAGCCTGAAAATCCGGTGGTaGGTGAAGGCGATGATGGAG +
Preference number: 5 (lower is better)
Translates to: TRYLCQQACYLPTAKGASLKIRW*VKAMME
Trigger: CTCCATCATCGCCTTCACCAACCACCGGATTTTCAG...GCTGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp GACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCAAAGCCCATGCTCTGCTaGATGCTCCTGAAAATCCGG +
Preference number: 5 (lower is better)
Translates to: DSAPRVQGAGFLRQTSRPKPMLC*MLLKIR
Trigger: CCGGATTTTCAGGAGCATCAAGCAGAGCATGGGCTT...TGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CAA 90 bp GACTCAGCCCCGAGGGTGCAGGGAGCTGGCTTTCTCCGCCAGACAAGCAGGCCACTGTCCTGCCAACTGTaGTTCTGGGCGTGGACATTT +
Preference number: 5 (lower is better)
Translates to: DSAPRVQGAGFLRQTSRPLSCQL*FWAWTF
Trigger: AAATGTCCACGCCCAGAACAACAGTTGGCAGGACAG...TGGCCTGCTTGTCTGGCGGAGAAAGCCAGCTCCCTGCACCCTCGGGGCTGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CAA 90 bp CCAACCCCAGATGAGGGCGCCTGCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCGGGATGGTATTCCATaGTATTCAGTGTGTCCTCCA +
Preference number: 5 (lower is better)
Translates to: PTPDEGACPLGGGRLPYARDGIP*YSVCPP
Trigger: TGGAGGACACACTGAATACAATGGAATACCATCCCG...GGCATAGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCCCTCATCTGGGGTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp AGGCAGGAGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCATCAAAGCAGGTCTCCTaGTCTTCCGTCTGGAACACC +
Preference number: 5 (lower is better)
Translates to: RQEPRGPTMHHRIQATLASKQVS*SSVWNT
Trigger: GGTGTTCCAGACGGAAGACAAGGAGACCTGCTTTGA...TGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCTCCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp AGGCAGGAGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCACTGAAAATCCGGTGGTaGGTGAAGGCGATGATGGAG +
Preference number: 5 (lower is better)
Translates to: RQEPRGPTMHHRIQATLALKIRW*VKAMME
Trigger: CTCCATCATCGCCTTCACCAACCACCGGATTTTCAG...TGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCTCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp GCTGTGTCACACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACATTTGGGGCTGCCGAGTGCTTCACCTaGGCCTTCTGGGCAGCGCTT +
Preference number: 5 (lower is better)
Translates to: AVSHLSCQLLFWAWTFGAAECFT*AFWAAL
Trigger: AAGCGCTGCCCAGAAGGCCAAGGTGAAGCACTCGGC...AGCCCCAAATGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CAA 90 bp AGTGCATGCGATGTGCCCGAGGTGTCGGGGCAGGGAGGAGGATTGATCTCGATGGATTCTGGACACTTCTaGGCGGGAATGGTCCGTGGC +
Preference number: 5 (lower is better)
Translates to: SACDVPEVSGQGGGLISMDSGHF*AGMVRG
Trigger: GCCACGGACCATTCCCGCCAAGAAGTGTCCAGAATC...CATCGAGATCAATCCTCCTCCCTGCCCCGACACCTCGGGCACATCGCATGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CAA 90 bp CCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGCGAGAAATTGGTAGTTaGTCTTCCAGAGGGGACATG +
Preference number: 5 (lower is better)
Translates to: PLEVVGCPMPSWALPQCWREIGS*SSRGDM
Trigger: CATGTCCCCTCTGGAAGACAAACTACCAATTTCTCG...CCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp GGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCTGGGTGACCTCCGAGAAATTGGTAGTTaGTCTTCCAGAGGGGACATG +
Preference number: 5 (lower is better)
Translates to: GGRLPYALLGAATVLGDLREIGS*SSRGDM
Trigger: CATGTCCCCTCTGGAAGACAAACTACCAATTTCTCG...GAGGTCACCCAGCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp GCTGTGTCACACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACATTTGGGGCTGACTCCTGGCACCCCTaGCCTCTGCTGTGGCTGTGT +
Preference number: 5 (lower is better)
Translates to: AVSHLSCQLLFWAWTFGADSWHP*PLLWLC
Trigger: ACACAGCCACAGCAGAGGCAAGGGGTGCCAGGAGTC...AGCCCCAAATGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CAA 90 bp AAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCCAGCAGGGGAGGATGGCTGTTTaGGCTGGGTGTGGTGGTGCA +
Preference number: 5 (lower is better)
Translates to: KVIATDANRAATRYLCQQGRMAV*AGCGGA
Trigger: TGCACCACCACACCCAGCCAAAACAGCCATCCTCCC...CTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS TCA 90 bp GCCACGACTCCGCTGACAGACGCTCGGCTGCCTCTGTGCCTTAGCTaGGCTGCTGAGAATGACGGTGTCAAGAACATGAGGAGGGCTGTT +
Preference number: 5 (lower is better)
Translates to: ATTPLTDARLPLCLS*AAENDGVKNMRRAV
Trigger: AACAGCCCTCCTCATGTTCTTGACACCGTCATTCTCAGCAGCTCAGCTAAGGCACAGAGGCAGCCGAGCGTCTGTCAGCGGAGTCGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
CDS CCA 90 bp TCCTGGCTGCCCACTCTGGCTGAGTTCATGCTTCTGGGCCTTCTGTaGTTACAGATCATGGAGTCCCACCTCCAGGTCAGCAGGAAGCCG +
Preference number: 5 (lower is better)
Translates to: SWLPTLAEFMLLGLL*LQIMESHLQVSRKP
Trigger: CGGCTTCCTGCTGACCTGGAGGTGGGACTCCATGATCTGTAACCACAGAAGGCCCAGAAGCATGAACTCAGCCAGAGTGGGCAGCCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR CAA 90 bp TGCGTCTGCCCGGCTCTGTGCTCTGAGTGCATGCGATGTGCCCGAGGTGTCGGGTACATGTCATGCGTCTaGTCGGTCCTATCAAGACGT +
Preference number: 5 (lower is better)
Translates to: CVCPALCSECMRCARGVGYMSCV*SVLSRR
Trigger: ACGTCTTGATAGGACCGACAAGACGCATGACATGTA...CCCGACACCTCGGGCACATCGCATGCACTCAGAGCACAGAGCCGGGCAGACGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000392585.2
CDS-3UTR CAA 90 bp GCCCCCTTGGAGGTGGTAGGCTGCCCTATGCCCTCCTGGGCGCTGCCACAGTGCCGTTTTTCAGTAGCATaGGGCACATTCACATTCTTC +
Preference number: 5 (lower is better)
Translates to: APLEVVGCPMPSWALPQCRFSVA*GTFTFF
Trigger: GAAGAATGTGAATGTGCCCAATGCTACTGAAAAACG...GCACTGTGGCAGCGCCCAGGAGGGCATAGGGCAGCCTACCACCTCCAAGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp GCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCGCCGAGTGCTTCACCTaGGCCTTCTGGGCAGCGCTT +
Preference number: 5 (lower is better)
Translates to: ANKVIATDANRAATRYLCAECFT*AFWAAL
Trigger: AAGCGCTGCCCAGAAGGCCAAGGTGAAGCACTCGGC...GCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp AAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCCAGCAGGATTCTGGACACTTCTaGGCGGGAATGGTCCGTGGC +
Preference number: 5 (lower is better)
Translates to: KVIATDANRAATRYLCQQDSGHF*AGMVRG
Trigger: GCCACGGACCATTCCCGCCAAGAAGTGTCCAGAATC...CTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp CTGCCACAGTGCTGGGTGACCTCCAGCATGGTGCTCACTGACATTCTGAGGCAGCCTCAATCAGCCTCTTaGCAGGGCATGGTGACCCTG +
Preference number: 5 (lower is better)
Translates to: LPQCWVTSSMVLTDILRQPQSAS*QGMVTL
Trigger: CAGGGTCACCATGCCCTGCAAAGAGGCTGATTGAGG...CTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCACTGTGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp ATCAGTGTGACCTGGTCTAGGCAAGGCCTTTGCGGCAGACCCAGATCTGACTCAGACTCCTGGCACCCCTaGCCTCTGCTGTGGCTGTGT +
Preference number: 5 (lower is better)
Translates to: ISVTWSRQGLCGRPRSDSDSWHP*PLLWLC
Trigger: ACACAGCCACAGCAGAGGCAAGGGGTGCCAGGAGTC...TGAGTCAGATCTGGGTCTGCCGCAAAGGCCTTGCCTAGACCAGGTCACACTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS CCA 90 bp CTCTGGCTGAGTTCATGCTTCTGGGCCTTCTGTGGTTACAGATCATaGAGTCCCACCTCCAGGTCAGCAGGAAGCCGCAGACAGACCTGG +
Preference number: 5 (lower is better)
Translates to: LWLSSCFWAFCGYRS*SPTSRSAGSRRQTW
Trigger: CCAGGTCTGTCTGCGGCTTCCTGCTGACCTGGAGGTGGGACTCCATGATCTGTAACCACAGAAGGCCCAGAAGCATGAACTCAGCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR CAA 90 bp AAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCCAGCAGTCAAGCTCCCTCCTGTaGCAGCGTGTGCCAGGATTT +
Preference number: 5 (lower is better)
Translates to: KVIATDANRAATRYLCQQSSSLL*QRVPGF
Trigger: AAATCCTGGCACACGCTGCAACAGGAGGGAGCTTGA...CTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp AGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTCTTCCAGCACTCGCTCCGCATTaGCTCCCAGCCCCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: SGHGGSGFRNEKLVVCLPALAPH*LPAPRP
Trigger: AGGCCTGGGGGCTGGGAGCAAATGCGGAGCGAGTGC...TGGAAGACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp CTCCTGAAAATCCGGTGGTTGGTGAAGGCGATGATGGAGAGAGGGATGGCAAAGGCCGAGTGCTTCACCTaGGCCTTCTGGGCAGCGCTT +
Preference number: 5 (lower is better)
Translates to: LLKIRWLVKAMMERGMAKAECFT*AFWAAL
Trigger: AAGCGCTGCCCAGAAGGCCAAGGTGAAGCACTCGGC...CTTTGCCATCCCTCTCTCCATCATCGCCTTCACCAACCACCGGATTTTCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR CAA 90 bp TCTGCTGTGGCTGTGTCACACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACACCTCAATCAGCCTCTTaGCAGGGCATGGTGACCCTG +
Preference number: 5 (lower is better)
Translates to: SAVAVSHLSCQLLFWAWTPQSAS*QGMVTL
Trigger: CAGGGTCACCATGCCCTGCAAAGAGGCTGATTGAGG...TGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACAGCCACAGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CAA 90 bp CGTCTGTCTTCATGGACCACTCTTTCCACCCCTTATGGATTCTGGACACTTCTTAGGGCGCCTGCCCCCTaGGAGGTGGTAGGCTGCCCT +
Preference number: 5 (lower is better)
Translates to: RLSSWTTLSTPYGFWTLLRAPAP*EVVGCP
Trigger: AGGGCAGCCTACCACCTCCAAGGGGGCAGGCGCCCT...AAGAAGTGTCCAGAATCCATAAGGGGTGGAAAGAGTGGTCCATGAAGACAGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS GCA 90 bp TCTCACGTGCTCCACTCACCACAGTGTCCTCAAGCTCCCTCCTGTTaGAGCGTGTGCCAGGATTTCCCTTCCTTTCAAAGGCGGGATGGT +
Preference number: 5 (lower is better)
Translates to: SHVLHSPQCPQAPSC*SVCQDFPSFQRRDG
Trigger: ACCATCCCGCCTTTGAAAGGAAGGGAAATCCTGGCACACGCTGCAACAGGAGGGAGCTTGAGGACACTGTGGTGAGTGGAGCACGTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
ENST00000551869.1
CDS-3UTR CAA 90 bp AGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAACGTTGTTGCAGGTCTaGGCGGAGAGGCCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: RNAPQIKSSPLMRTGQPPTLLQV*AERPRE
Trigger: CTCCCTGGGCCTCTCCGCCAAGACCTGCAACAACGT...TGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp GCTTTGACGAGGAGAACCAGGTGGTACGGGGCGAAGCAGACTAGGAAGATGACACCTCAATCAGCCTCTTaGCAGGGCATGGTGACCCTG +
Preference number: 5 (lower is better)
Translates to: ALTRRTRWYGAKQTRKMTPQSAS*QGMVTL
Trigger: CAGGGTCACCATGCCCTGCAAAGAGGCTGATTGAGG...TGTCATCTTCCTAGTCTGCTTCGCCCCGTACCACCTGGTTCTCCTCGTCAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR CAA 90 bp GGCAGGAGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGTTCAGGAACGAGAAATaGGTAGTTTGTCTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: GRSPEGPQCTTASRQRLQFRNEK*VVCLPE
Trigger: CTCTGGAAGACAAACTACCAATTTCTCGTTCCTGAA...CTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCTCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp AGGTACCTCTGCCAGCAGGCGTGCTACCTGCCCACAGCCAAGGGAGCCAGCCAGTTCAGGAACGAGAAATaGGTAGTTTGTCTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: RYLCQQACYLPTAKGASQFRNEK*VVCLPE
Trigger: CTCTGGAAGACAAACTACCAATTTCTCGTTCCTGAA...CTGGCTGGCTCCCTTGGCTGTGGGCAGGTAGCACGCCTGCTGGCAGAGGTACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp AGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCATCTGGGCGTGGACATTaGGGGCTCCCCGTTGAGGAC +
Preference number: 5 (lower is better)
Translates to: RNAPQIKSSPLMRTGQPPSGRGH*GLPVED
Trigger: GTCCTCAACGGGGAGCCCCAAATGTCCACGCCCAGA...TGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS CCA 90 bp TCATGGAGTCCCACCTCCAGGTCAGCAGGAAGCCGCAGACAGACCTaGCCTCAGCACCATTGTAACCGTTTTTCAGTAGCATTGGGCACA +
Preference number: 5 (lower is better)
Translates to: SWSPTSRSAGSRRQT*PQHHCNRFSVALGT
Trigger: TGTGCCCAATGCTACTGAAAAACGGTTACAATGGTGCTGAGGCCAGGTCTGTCTGCGGCTTCCTGCTGACCTGGAGGTGGGACTCCATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR CAA 90 bp GCTGTGTCACACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACATTTGGGGCTCCTCCCTGGCATATTTaGCGGGTTCCAATCTCAGTG +
Preference number: 5 (lower is better)
Translates to: AVSHLSCQLLFWAWTFGAPPWHI*RVPISV
Trigger: CACTGAGATTGGAACCCGCAAAATATGCCAGGGAGG...AGCCCCAAATGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329797.8
CDS-3UTR CAA 90 bp AGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTCTTCCAACGTTGTTGCAGGTCTaGGCGGAGAGGCCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: SGHGGSGFRNEKLVVCLPTLLQV*AERPRE
Trigger: CTCCCTGGGCCTCTCCGCCAAGACCTGCAACAACGT...TGGAAGACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp GCTTTGACGAGGAGAACCAGGTGGTACGGGGCGAAGCAGACTAGGAAGATGACATCTTCGAAGGACACGTaGTTGCAGGTCTTGGCGGAG +
Preference number: 5 (lower is better)
Translates to: ALTRRTRWYGAKQTRKMTSSKDT*LQVLAE
Trigger: CTCCGCCAAGACCTGCAACAACGTGTCCTTCGAAGA...TGTCATCTTCCTAGTCTGCTTCGCCCCGTACCACCTGGTTCTCCTCGTCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR CAA 90 bp GCTGTGTCACACCTGTCCTGCCAACTGTTGTTCTGGGCGTGGACATTTGGGGCTCTGAAAATCCGGTGGTaGGTGAAGGCGATGATGGAG +
Preference number: 5 (lower is better)
Translates to: AVSHLSCQLLFWAWTFGALKIRW*VKAMME
Trigger: CTCCATCATCGCCTTCACCAACCACCGGATTTTCAG...AGCCCCAAATGTCCACGCCCAGAACAACAGTTGGCAGGACAGGTGTGACACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CAA 90 bp AAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCCAGCAGGCGAGAAATTGGTAGTTaGTCTTCCAGAGGGGACATG +
Preference number: 5 (lower is better)
Translates to: KSSPLMRTGQPPGTSASRREIGS*SSRGDM
Trigger: CATGTCCCCTCTGGAAGACAAACTACCAATTTCTCG...CCTGCTGGCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp GGAAACCAGGGCATCAGTGTGACCTGGTCTAGGCAAGGCCTTTGCGGCAGACCCAAAAGAGACAAGATTTaGCCATGTTGCCGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: GNQGISVTWSRQGLCGRPKRDKI*PCCRGW
Trigger: CCAGCCTCGGCAACATGGCAAAATCTTGTCTCTTTT...GGGTCTGCCGCAAAGGCCTTGCCTAGACCAGGTCACACTGATGCCCTGGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CAA 90 bp AGCCCAGAGGGCCCACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCAAAAGAGACAAGATTTaGCCATGTTGCCGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: SPEGPQCTTASRQRLQKCKRDKI*PCCRGW
Trigger: CCAGCCTCGGCAACATGGCAAAATCTTGTCTCTTTT...GCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTGGGCCCTCTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS GCA 90 bp CTCCACTCACCACAGTGTCCTCAAGCTCCCTCCTGTTGCAGCGTGTaGCAGGATTTCCCTTCCTTTCAAAGGCGGGATGGTATTCCATTG +
Preference number: 5 (lower is better)
Translates to: LHSPQCPQAPSCCSV*QDFPSFQRRDGIPL
Trigger: CAATGGAATACCATCCCGCCTTTGAAAGGAAGGGAAATCCTGGCACACGCTGCAACAGGAGGGAGCTTGAGGACACTGTGGTGAGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
ENST00000551869.1
CDS-3UTR CAA 90 bp TGCTGGGTGACCTCCAGCATGGTGCTCACTGACATTCTGAGGCAGGAGCCCAGACGGGATGGTATTCCATaGTATTCAGTGTGTCCTCCA +
Preference number: 5 (lower is better)
Translates to: CWVTSSMVLTDILRQEPRRDGIP*YSVCPP
Trigger: TGGAGGACACACTGAATACAATGGAATACCATCCCG...TCTGGGCTCCTGCCTCAGAATGTCAGTGAGCACCATGCTGGAGGTCACCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp ATCAGTGTGACCTGGTCTAGGCAAGGCCTTTGCGGCAGACCCAGATCTGACTCATCAAAGCAGGTCTCCTaGTCTTCCGTCTGGAACACC +
Preference number: 5 (lower is better)
Translates to: ISVTWSRQGLCGRPRSDSSKQVS*SSVWNT
Trigger: GGTGTTCCAGACGGAAGACAAGGAGACCTGCTTTGA...TGAGTCAGATCTGGGTCTGCCGCAAAGGCCTTGCCTAGACCAGGTCACACTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CAA 90 bp AGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACGGGAGGATGGCTGTTTaGGCTGGGTGTGGTGGTGCA +
Preference number: 5 (lower is better)
Translates to: RQRLQKCSANKVIATDANGRMAV*AGCGGA
Trigger: TGCACCACCACACCCAGCCAAAACAGCCATCCTCCC...GTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000551869.1
CDS-3UTR CAA 90 bp CACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCAAGCTCCCTCCTGTaGCAGCGTGTGCCAGGATTT +
Preference number: 5 (lower is better)
Translates to: HNAPPHPGNACRNAPQIKSSSLL*QRVPGF
Trigger: AAATCCTGGCACACGCTGCAACAGGAGGGAGCTTGA...CTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp AGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACTCAAGCTCCCTCCTGTaGCAGCGTGTGCCAGGATTT +
Preference number: 5 (lower is better)
Translates to: RQRLQKCSANKVIATDANSSSLL*QRVPGF
Trigger: AAATCCTGGCACACGCTGCAACAGGAGGGAGCTTGA...GTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp GCCAGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTCTTTCAAAGCAGGTCTCCTaGTCTTCCGTCTGGAACACC +
Preference number: 5 (lower is better)
Translates to: ASGHGGSGFRNEKLVVCLSKQVS*SSVWNT
Trigger: GGTGTTCCAGACGGAAGACAAGGAGACCTGCTTTGA...AAGACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp CGTCTGTCTTCATGGACCACTCTTTCCACCCCTTATGGATTCTGGACACTTCTTGAAAAGGCAGCGGCTTaGACGAGGAGAACCAGGTGG +
Preference number: 5 (lower is better)
Translates to: RLSSWTTLSTPYGFWTLLEKAAA*TRRTRW
Trigger: CCACCTGGTTCTCCTCGTCAAAGCCGCTGCCTTTTC...AAGAAGTGTCCAGAATCCATAAGGGGTGGAAAGAGTGGTCCATGAAGACAGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS-3UTR CAA 90 bp GCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGGTACCTCTGCCGAGAAATTGGTAGTTaGTCTTCCAGAGGGGACATG +
Preference number: 5 (lower is better)
Translates to: ANKVIATDANRAATRYLCREIGS*SSRGDM
Trigger: CATGTCCCCTCTGGAAGACAAACTACCAATTTCTCG...GCAGAGGTACCTGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp AGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCGAACAGGGCAGCCACCAGCATCCAGGCAACGCTaGCAGAAATGCTCCGCAAAT +
Preference number: 5 (lower is better)
Translates to: RNAPQIKSSPLMRTGQPPASRQR*QKCSAN
Trigger: ATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGC...TGGTGGCTGCCCTGTTCGCATCAGTGGCGATGACTTTATTTGCGGAGCATTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp CACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGGCATCCAGGCAACGCTaGCAGAAATGCTCCGCAAAT +
Preference number: 5 (lower is better)
Translates to: HNAPPHPGNACRNAPQIKASRQR*QKCSAN
Trigger: ATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGC...CTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS CCA 90 bp CTGTTGCAGCGTGTGCCAGGATTTCCCTTCCTTTCAAAGGCGGGATaGTATTCCATTGTATTCAGTGTGTCCTCCAGGGTCTCGCCAAAA +
Preference number: 5 (lower is better)
Translates to: LLQRVPGFPFLSKAG*YSIVFSVSSRVSPK
Trigger: TTTTGGCGAGACCCTGGAGGACACACTGAATACAATGGAATACCATCCCGCCTTTGAAAGGAAGGGAAATCCTGGCACACGCTGCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
ENST00000551869.1
CDS-3UTR CAA 90 bp AGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTCTTCCATCAAAGCAGGTCTCCTaGTCTTCCGTCTGGAACACC +
Preference number: 5 (lower is better)
Translates to: SGHGGSGFRNEKLVVCLPSKQVS*SSVWNT
Trigger: GGTGTTCCAGACGGAAGACAAGGAGACCTGCTTTGA...TGGAAGACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp AGTGGTCACGGAGGGAGTGGCTTCAGGAACGAGAAATTGGTAGTTTGTCTTCCAAAGCCCATGCTCTGCTaGATGCTCCTGAAAATCCGG +
Preference number: 5 (lower is better)
Translates to: SGHGGSGFRNEKLVVCLPKPMLC*MLLKIR
Trigger: CCGGATTTTCAGGAGCATCAAGCAGAGCATGGGCTT...TGGAAGACAAACTACCAATTTCTCGTTCCTGAAGCCACTCCCTCCGTGACCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp GCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATGCATCCAGGCAACGCTaGCAGAAATGCTCCGCAAAT +
Preference number: 5 (lower is better)
Translates to: ASRQRLQKCSANKVIATDASRQR*QKCSAN
Trigger: ATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGC...ATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS GCA 90 bp AATATATATATATATTCCACTGTGCCCTTCCATCTTGAGCAATCCTaGACGTGTGGCGTGTGGCGTGTGGCGTGTGGCGTGTTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: NIYIYSTVPFHLEQS*TCGVWRVACGVFCS
Trigger: TGAGCAGAACACGCCACACGCCACACGCCACACGCCACACGTGCAGGATTGCTCAAGATGGAAGGGCACAGTGGAATATATATATATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
CDS-3UTR CAA 90 bp ATCAGTGTGACCTGGTCTAGGCAAGGCCTTTGCGGCAGACCCAGATCTGACTCACGTTTTTCAGTAGCATaGGGCACATTCACATTCTTC +
Preference number: 5 (lower is better)
Translates to: ISVTWSRQGLCGRPRSDSRFSVA*GTFTFF
Trigger: GAAGAATGTGAATGTGCCCAATGCTACTGAAAAACG...TGAGTCAGATCTGGGTCTGCCGCAAAGGCCTTGCCTAGACCAGGTCACACTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000551869.1
CDS-3UTR CAA 90 bp CACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGGTTTCCTGGCATATTTaGCGGGTTCCAATCTCAGTG +
Preference number: 5 (lower is better)
Translates to: HNAPPHPGNACRNAPQIKVSWHI*RVPISV
Trigger: CACTGAGATTGGAACCCGCAAAATATGCCAGGAAAC...CTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392585.2
CDS-3UTR CAA 90 bp GCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATTACATGTCATGCGTCTaGTCGGTCCTATCAAGACGT +
Preference number: 5 (lower is better)
Translates to: ASRQRLQKCSANKVIATDYMSCV*SVLSRR
Trigger: ACGTCTTGATAGGACCGACAAGACGCATGACATGTA...ATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
CDS-3UTR CAA 90 bp GCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCCACTGATCGGGATGGTATTCCATaGTATTCAGTGTGTCCTCCA +
Preference number: 5 (lower is better)
Translates to: ASRQRLQKCSANKVIATDRDGIP*YSVCPP
Trigger: TGGAGGACACACTGAATACAATGGAATACCATCCCG...ATCAGTGGCGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp GCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTCATCGCGTTTTTCAGTAGCATaGGGCACATTCACATTCTTC +
Preference number: 5 (lower is better)
Translates to: APPHPGNACRNAPQIKSSRFSVA*GTFTFF
Trigger: GAAGAATGTGAATGTGCCCAATGCTACTGAAAAACG...CGATGACTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp CACAATGCACCACCGCATCCAGGCAACGCTTGCAGAAATGCTCCGCAAATAAAGTTCAGGAACGAGAAATaGGTAGTTTGTCTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: HNAPPHPGNACRNAPQIKFRNEK*VVCLPE
Trigger: CTCTGGAAGACAAACTACCAATTTCTCGTTCCTGAA...CTTTATTTGCGGAGCATTTCTGCAAGCGTTGCCTGGATGCGGTGGTGCATTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000392585.2
ENST00000539291.6
ENST00000551869.1
CDS-3UTR CAA 90 bp CGTCTGTCTTCATGGACCACTCTTTCCACCCCTTATGGATTCTGGACACTTCTTAAAAGAGACAAGATTTaGCCATGTTGCCGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: RLSSWTTLSTPYGFWTLLKRDKI*PCCRGW
Trigger: CCAGCCTCGGCAACATGGCAAAATCTTGTCTCTTTT...AAGAAGTGTCCAGAATCCATAAGGGGTGGAAAGAGTGGTCCATGAAGACAGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS TCA 90 bp CAAAAATATAAATATATATATATATTCCACTGTGCCCTTCCATCTTaGGCAATCCTGCACGTGTGGCGTGTGGCGTGTGGCGTGTGGCGT +
Preference number: 5 (lower is better)
Translates to: QKYKYIYIFHCALPS*AILHVWRVACGVWR
Trigger: ACGCCACACGCCACACGCCACACGCCACACGTGCAGGATTGCTCAAGATGGAAGGGCACAGTGGAATATATATATATATTTATATTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
CDS TCA 90 bp AAGTACATGTCATGCGTCTTGTCGGTCCTATCAAGACGTTCACTCTaGGAGTTTAAAATGACCTGGAAAAAGAGTAGGTTGAAATTGTTT +
Preference number: 5 (lower is better)
Translates to: KYMSCVLSVLSRRSL*EFKMTWKKSRLKLF
Trigger: AAACAATTTCAACCTACTCTTTTTCCAGGTCATTTTAAACTCTCAGAGTGAACGTCTTGATAGGACCGACAAGACGCATGACATGTACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549990.1
CDS CCA 72 bp GGGGTGCCTCCGCGCTGTTCTCCACGGTGGTGGCGCTaGCCCACCTTCCCCCGGCGGTGTGCAGGGCTCCGG +
Preference number: 6 (lower is better)
Translates to: GVPPRCSPRWWR*PTFPRRCAGLR
Trigger: CCGGAGCCCTGCACACCGCCGGGGGAAGGTGGGCCAGCGCCACCACCGTGGAGAACAGCGCGGAGGCACCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
CDS CCA 72 bp TGTGCGCTGGGCTCCCCTGTCACCTCCCCACGTGGGTaGGCATCTCTGCGTGTCTTCAGCGTGTGTCCTTCC +
Preference number: 6 (lower is better)
Translates to: CALGSPVTSPRG*ASLRVFSVCPS
Trigger: GGAAGGACACACGCTGAAGACACGCAGAGATGCCCACCCACGTGGGGAGGTGACAGGGGAGCCCAGCGCACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
ENST00000551869.1
CDS CCA 72 bp TCTCTGTGCGCTGGGCTCCCCTGTCACCTCCCCACGTaGGTGGGCATCTCTGCGTGTCTTCAGCGTGTGTCC +
Preference number: 6 (lower is better)
Translates to: SLCAGLPCHLPT*VGISACLQRVS
Trigger: GGACACACGCTGAAGACACGCAGAGATGCCCACCCACGTGGGGAGGTGACAGGGGAGCCCAGCGCACAGAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
ENST00000551869.1
CDS CCA 72 bp GCCAGGGGGTTGCTAGAGGTCACGCAGGGTGTGCAGTaGTGTGACTTCCCCAAGCTCTGCCAGCGCCACCAG +
Preference number: 6 (lower is better)
Translates to: ARGLLEVTQGVQ*CDFPKLCQRHQ
Trigger: CTGGTGGCGCTGGCAGAGCTTGGGGAAGTCACACCACTGCACACCCTGCGTGACCTCTAGCAACCCCCTGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS TCA 72 bp TGGCGTGTGGCGTGTTCTGCTCAGCCACGACTCCGCTaGCAGACGCTCGGCTGCCTCTGTGCCTTAGCTGAG +
Preference number: 6 (lower is better)
Translates to: WRVACSAQPRLR*QTLGCLCALAE
Trigger: CTCAGCTAAGGCACAGAGGCAGCCGAGCGTCTGTCAGCGGAGTCGTGGCTGAGCAGAACACGCCACACGCCA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
CDS GCA 72 bp GCTCCCCTGTCACCTCCCCACGTGGGTGGGCATCTCTaGGTGTCTTCAGCGTGTGTCCTTCCGTGTCTCACG +
Preference number: 6 (lower is better)
Translates to: APLSPPHVGGHL*VSSACVLPCLT
Trigger: CGTGAGACACGGAAGGACACACGCTGAAGACACGCAGAGATGCCCACCCACGTGGGGAGGTGACAGGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
ENST00000551869.1
CDS CCA 72 bp GCAATCCTGCACGTGTGGCGTGTGGCGTGTGGCGTGTaGCGTGTTCTGCTCAGCCACGACTCCGCTGACAGA +
Preference number: 6 (lower is better)
Translates to: AILHVWRVACGV*RVLLSHDSADR
Trigger: TCTGTCAGCGGAGTCGTGGCTGAGCAGAACACGCCACACGCCACACGCCACACGCCACACGTGCAGGATTGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
CDS GCA 72 bp CGGAGACTCTGCCCCAGGAAGCACTCGCTCCGCATTTaGTCCCAGCCCCCAGGCCTCCATTCCACTTTGTCT +
Preference number: 6 (lower is better)
Translates to: RRLCPRKHSLRI*SQPPGLHSTLS
Trigger: AGACAAAGTGGAATGGAGGCCTGGGGGCTGGGAGCAAATGCGGAGCGAGTGCTTCCTGGGGCAGAGTCTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
ENST00000551869.1
CDS CCA 72 bp ATCTTGAGCAATCCTGCACGTGTGGCGTGTGGCGTGTaGCGTGTGGCGTGTTCTGCTCAGCCACGACTCCGC +
Preference number: 6 (lower is better)
Translates to: ILSNPARVACGV*RVACSAQPRLR
Trigger: GCGGAGTCGTGGCTGAGCAGAACACGCCACACGCCACACGCCACACGCCACACGTGCAGGATTGCTCAAGAT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
CDS CCA 72 bp CCCTTCCATCTTGAGCAATCCTGCACGTGTGGCGTGTaGCGTGTGGCGTGTGGCGTGTTCTGCTCAGCCACG +
Preference number: 6 (lower is better)
Translates to: PFHLEQSCTCGV*RVACGVFCSAT
Trigger: CGTGGCTGAGCAGAACACGCCACACGCCACACGCCACACGCCACACGTGCAGGATTGCTCAAGATGGAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
CDS CAA 90 bp GTCTCACGTGCTCCACTCACCACAGTGTCCTCAAGCTCCCTCCTGTaGCAGCGTGTGCCAGGATTTCCCTTCCTTTCAAAGGCGGGATGG +
Preference number: 6 (lower is better)
Translates to: VSRAPLTTVSSSSLL*QRVPGFPFLSKAGW
Trigger: CCATCCCGCCTTTGAAAGGAAGGGAAATCCTGGCACACGCTGCAACAGGAGGGAGCTTGAGGACACTGTGGTGAGTGGAGCACGTGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
ENST00000551869.1
CDS TCA 72 bp CCGCTGACAGACGCTCGGCTGCCTCTGTGCCTTAGCTaGGCTGCTGAGAATGACGGTGTCAAGAACATGAGG +
Preference number: 6 (lower is better)
Translates to: PLTDARLPLCLS*AAENDGVKNMR
Trigger: CCTCATGTTCTTGACACCGTCATTCTCAGCAGCTCAGCTAAGGCACAGAGGCAGCCGAGCGTCTGTCAGCGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
CDS GCA 72 bp CGGTGTCAAGAACATGAGGAGGGCTGTTCACGTCCCTaGTTTCCGTTCTCCTGGGTCAGACCCACAGTTGGC +
Preference number: 6 (lower is better)
Translates to: RCQEHEEGCSRP*FPFSWVRPTVG
Trigger: GCCAACTGTGGGTCTGACCCAGGAGAACGGAAAGCAGGGACGTGAACAGCCCTCCTCATGTTCTTGACACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
CDS GCA 72 bp TGCGTGTCTTCAGCGTGTGTCCTTCCGTGTCTCACGTaGTCCACTCACCACAGTGTCCTCAAGCTCCCTCCT +
Preference number: 6 (lower is better)
Translates to: CVSSACVLPCLT*STHHSVLKLPP
Trigger: AGGAGGGAGCTTGAGGACACTGTGGTGAGTGGAGCACGTGAGACACGGAAGGACACACGCTGAAGACACGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
ENST00000551869.1
CDS GCA 72 bp TCGGCAGAACCTTCTCATCTTCCCAAACGGAGACTCTaGCCCAGGAAGCACTCGCTCCGCATTTGCTCCCAG +
Preference number: 6 (lower is better)
Translates to: SAEPSHLPKRRL*PRKHSLRICSQ
Trigger: CTGGGAGCAAATGCGGAGCGAGTGCTTCCTGGGGCAGAGTCTCCGTTTGGGAAGATGAGAAGGTTCTGCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
ENST00000551869.1
CDS CCA 72 bp TCCGTTCTCCTGGGTCAGACCCACAGTTGGCATTGCTaGATCTCACGGCAGTTCCGTCTCATCTCGTGGGGT +
Preference number: 6 (lower is better)
Translates to: SVLLGQTHSWHC*ISRQFRLISWG
Trigger: ACCCCACGAGATGAGACGGAACTGCCGTGAGATCCAGCAATGCCAACTGTGGGTCTGACCCAGGAGAACGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
CDS CCA 72 bp GAGGAGGGCTGTTCACGTCCCTGCTTTCCGTTCTCCTaGGTCAGACCCACAGTTGGCATTGCTGGATCTCAC +
Preference number: 6 (lower is better)
Translates to: EEGCSRPCFPFS*VRPTVGIAGSH
Trigger: GTGAGATCCAGCAATGCCAACTGTGGGTCTGACCCAGGAGAACGGAAAGCAGGGACGTGAACAGCCCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
CDS GCA 72 bp ATATATTCCACTGTGCCCTTCCATCTTGAGCAATCCTaGACGTGTGGCGTGTGGCGTGTGGCGTGTGGCGTG +
Preference number: 6 (lower is better)
Translates to: IYSTVPFHLEQS*TCGVWRVACGV
Trigger: CACGCCACACGCCACACGCCACACGCCACACGTGCAGGATTGCTCAAGATGGAAGGGCACAGTGGAATATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
CDS GCA 72 bp CCACAGTGTCCTCAAGCTCCCTCCTGTTGCAGCGTGTaGCAGGATTTCCCTTCCTTTCAAAGGCGGGATGGT +
Preference number: 6 (lower is better)
Translates to: PQCPQAPSCCSV*QDFPSFQRRDG
Trigger: ACCATCCCGCCTTTGAAAGGAAGGGAAATCCTGGCACACGCTGCAACAGGAGGGAGCTTGAGGACACTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
ENST00000551869.1
CDS CCA 72 bp TCCCTGCTTTCCGTTCTCCTGGGTCAGACCCACAGTTaGCATTGCTGGATCTCACGGCAGTTCCGTCTCATC +
Preference number: 6 (lower is better)
Translates to: SLLSVLLGQTHS*HCWISRQFRLI
Trigger: GATGAGACGGAACTGCCGTGAGATCCAGCAATGCCAACTGTGGGTCTGACCCAGGAGAACGGAAAGCAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
CDS CCA 72 bp CCCACCTCCAGGTCAGCAGGAAGCCGCAGACAGACCTaGCCTCAGCACCATTGTAACCGTTTTTCAGTAGCA +
Preference number: 6 (lower is better)
Translates to: PTSRSAGSRRQT*PQHHCNRFSVA
Trigger: TGCTACTGAAAAACGGTTACAATGGTGCTGAGGCCAGGTCTGTCTGCGGCTTCCTGCTGACCTGGAGGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS CCA 72 bp CCCACTCTGGCTGAGTTCATGCTTCTGGGCCTTCTGTaGTTACAGATCATGGAGTCCCACCTCCAGGTCAGC +
Preference number: 6 (lower is better)
Translates to: PTLAEFMLLGLL*LQIMESHLQVS
Trigger: GCTGACCTGGAGGTGGGACTCCATGATCTGTAACCACAGAAGGCCCAGAAGCATGAACTCAGCCAGAGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS CCA 72 bp TGTCCTGGCTGCCCACTCTGGCTGAGTTCATGCTTCTaGGCCTTCTGTGGTTACAGATCATGGAGTCCCACC +
Preference number: 6 (lower is better)
Translates to: CPGCPLWLSSCF*AFCGYRSWSPT
Trigger: GGTGGGACTCCATGATCTGTAACCACAGAAGGCCCAGAAGCATGAACTCAGCCAGAGTGGGCAGCCAGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS CAA 72 bp GTCCCTGCTTTCCGTTCTCCTGGGTCAGACCCACAGTaGGCATTGCTGGATCTCACGGCAGTTCCGTCTCAT +
Preference number: 6 (lower is better)
Translates to: VPAFRSPGSDPQ*ALLDLTAVPSH
Trigger: ATGAGACGGAACTGCCGTGAGATCCAGCAATGCCAACTGTGGGTCTGACCCAGGAGAACGGAAAGCAGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
CDS GCA 72 bp CTCCACTCACCACAGTGTCCTCAAGCTCCCTCCTGTTaGAGCGTGTGCCAGGATTTCCCTTCCTTTCAAAGG +
Preference number: 6 (lower is better)
Translates to: LHSPQCPQAPSC*SVCQDFPSFQR
Trigger: CCTTTGAAAGGAAGGGAAATCCTGGCACACGCTGCAACAGGAGGGAGCTTGAGGACACTGTGGTGAGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329797.8
ENST00000539291.6
ENST00000549990.1
ENST00000551869.1
CDS CCA 72 bp AGTTCATGCTTCTGGGCCTTCTGTGGTTACAGATCATaGAGTCCCACCTCCAGGTCAGCAGGAAGCCGCAGA +
Preference number: 6 (lower is better)
Translates to: SSCFWAFCGYRS*SPTSRSAGSRR
Trigger: TCTGCGGCTTCCTGCTGACCTGGAGGTGGGACTCCATGATCTGTAACCACAGAAGGCCCAGAAGCATGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS TCA 72 bp TCATGCGTCTTGTCGGTCCTATCAAGACGTTCACTCTaGGAGTTTAAAATGACCCAGGGCCCCGCCTGCGTG +
Preference number: 6 (lower is better)
Translates to: SCVLSVLSRRSL*EFKMTQGPACV
Trigger: CACGCAGGCGGGGCCCTGGGTCATTTTAAACTCTCAGAGTGAACGTCTTGATAGGACCGACAAGACGCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000392585.2
CDS CAA 90 bp TGGTCACTGGGGTGGCGTTTCCATTGTAACCGTTTTTCAGTAGCATaGGGCACATTCACATTCTTCTGCAACCATCGCCAGCATCCGTCG +
Preference number: 6 (lower is better)
Translates to: WSLGWRFHCNRFSVA*GTFTFFCNHRQHPS
Trigger: CGACGGATGCTGGCGATGGTTGCAGAAGAATGTGAATGTGCCCAATGCTACTGAAAAACGGTTACAATGGAAACGCCACCCCAGTGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000539291.6
CDS CAA 90 bp AGACAGACCTGGCCTCAGCACCATTGTAACCGTTTTTCAGTAGCATaGGGCACATTCACATTCTTCTGCAACCATCGCCAGCATCCGTCG +
Preference number: 6 (lower is better)
Translates to: RQTWPQHHCNRFSVA*GTFTFFCNHRQHPS
Trigger: CGACGGATGCTGGCGATGGTTGCAGAAGAATGTGAATGTGCCCAATGCTACTGAAAAACGGTTACAATGGTGCTGAGGCCAGGTCTGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS TCA 72 bp TCATGCGTCTTGTCGGTCCTATCAAGACGTTCACTCTaGGAGTTTAAAATGACCTCGGCCTCCCAAAGTGCT +
Preference number: 6 (lower is better)
Translates to: SCVLSVLSRRSL*EFKMTSASQSA
Trigger: AGCACTTTGGGAGGCCGAGGTCATTTTAAACTCTCAGAGTGAACGTCTTGATAGGACCGACAAGACGCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539291.6
CDS CAA 72 bp GGGTGGCGTTTCCATTGTAACCGTTTTTCAGTAGCATaGGGCACATTCACATTCTTCTGCAACCATCGCCAG +
Preference number: 6 (lower is better)
Translates to: GWRFHCNRFSVA*GTFTFFCNHRQ
Trigger: CTGGCGATGGTTGCAGAAGAATGTGAATGTGCCCAATGCTACTGAAAAACGGTTACAATGGAAACGCCACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329797.8
ENST00000539291.6
CDS CAA 72 bp TGGCCTCAGCACCATTGTAACCGTTTTTCAGTAGCATaGGGCACATTCACATTCTTCTGCAACCATCGCCAG +
Preference number: 6 (lower is better)
Translates to: WPQHHCNRFSVA*GTFTFFCNHRQ
Trigger: CTGGCGATGGTTGCAGAAGAATGTGAATGTGCCCAATGCTACTGAAAAACGGTTACAATGGTGCTGAGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551869.1
CDS TCA 72 bp TTTTTAAATGTTGAGAATCTGCCGTTGCATCCCACATaGGAAACACAAGCAAGGCTCCAAGCCAACAGGCAT +
Preference number: 6 (lower is better)
Translates to: FLNVENLPLHPT*ETQARLQANRH
Trigger: ATGCCTGTTGGCTTGGAGCCTTGCTTGTGTTTCTCATGTGGGATGCAACGGCAGATTCTCAACATTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549990.1
CDS TCA 72 bp TCATGCGTCTTGTCGGTCCTATCAAGACGTTCACTCTaGGAGTTTAAAATGACCTGGAAAAAGAGTAGGTTG +
Preference number: 6 (lower is better)
Translates to: SCVLSVLSRRSL*EFKMTWKKSRL
Trigger: CAACCTACTCTTTTTCCAGGTCATTTTAAACTCTCAGAGTGAACGTCTTGATAGGACCGACAAGACGCATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549990.1