RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPR108 (Homo sapiens)

Ensembl gene IDs: ENSG00000125734

Ensembl transcript IDs: ENST00000264080.11, ENST00000430424.8, ENST00000594034.5, ENST00000595108.5, ENST00000595620.5, ENST00000595908.5, ENST00000597043.1, ENST00000597298.5, ENST00000597706.5, ENST00000598052.5, ENST00000600773.1, ENST00000601402.5, ENST00000601716.1

Found 472 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCAGAGGTCCCTCCGCCATCCACCTTGCGGGGGACTGTGGCCTGTaGCTTCGGGAGCCCTGGTTTGGAGGGTGCTTCCGGGAGGAGCCC +
Preference number: 1 (lower is better)
Translates to: CRGPSAIHLAGDCGL*LREPWFGGCFREEP
Trigger: GGGCTCCTCCCGGAAGCACCCTCCAAACCAGGGCTCCCGAAGCCACAGGCCACAGTCCCCCGCAAGGTGGATGGCGGAGGGACCTCTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595908.5
3UTR GCA 90 bp GCGGGGGACTGTGGCCTGTGGCTTCGGGAGCCCTGGTTTGGAGGGTaGTTCCGGGAGGAGCCCGGGAAAGATAAACAACGTCTTCTGCTC +
Preference number: 1 (lower is better)
Translates to: AGDCGLWLREPWFGG*FREEPGKDKQRLLL
Trigger: GAGCAGAAGACGTTGTTTATCTTTCCCGGGCTCCTCCCGGAAGCACCCTCCAAACCAGGGCTCCCGAAGCCACAGGCCACAGTCCCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595908.5
3UTR CCA 90 bp GCCATCCACCTTGCGGGGGACTGTGGCCTGTGGCTTCGGGAGCCCTaGTTTGGAGGGTGCTTCCGGGAGGAGCCCGGGAAAGATAAACAA +
Preference number: 1 (lower is better)
Translates to: AIHLAGDCGLWLREP*FGGCFREEPGKDKQ
Trigger: TTGTTTATCTTTCCCGGGCTCCTCCCGGAAGCACCCTCCAAACCAGGGCTCCCGAAGCCACAGGCCACAGTCCCCCGCAAGGTGGATGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595908.5
3UTR GCA 90 bp GAGGGTGCTTCCGGGAGGAGCCCGGGAAAGATAAACAACGTCTTCTaGTCTCCATACTTCCGCACCTGGACCCTGATCAGCCCAGGTGCG +
Preference number: 1 (lower is better)
Translates to: EGASGRSPGKINNVF*SPYFRTWTLISPGA
Trigger: CGCACCTGGGCTGATCAGGGTCCAGGTGCGGAAGTATGGAGAGCAGAAGACGTTGTTTATCTTTCCCGGGCTCCTCCCGGAAGCACCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595908.5
3UTR TCA 90 bp GATGTGGAGGTGATCATAACAGTTCCCGCCCGCTGGCTGTTTTGTTaGCTTTGGAGAGGCCTTCCCGGAACCCAGAGTCCGTCATTACTT +
Preference number: 1 (lower is better)
Translates to: DVEVIITVPARWLFC*LWRGLPGTQSPSLL
Trigger: AAGTAATGACGGACTCTGGGTTCCGGGAAGGCCTCTCCAAAGTCAACAAAACAGCCAGCGGGCGGGAACTGTTATGATCACCTCCACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
3UTR TCA 90 bp CCGGATCATCACCGTGATGTCGAATGGATGCTCCTTTCCTGGCACTaGATTGTTGCAGTTGTGGAAGTTCAGGCTGTACTGGCCTTCTTC +
Preference number: 1 (lower is better)
Translates to: PDHHRDVEWMLLSWH*IVAVVEVQAVLAFF
Trigger: GAAGAAGGCCAGTACAGCCTGAACTTCCACAACTGCAACAATTCAGTGCCAGGAAAGGAGCATCCATTCGACATCACGGTGATGATCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
3UTR-3UTR GCA 90 bp GGCTGCAGAGGTCCCTCCGCCATCCACCTTGCGGGGGACTGTGGCCTGTGGCTTCCCTGGTTTGGAGGGTaGTTCCGGGAGGAGCCCGGG +
Preference number: 2 (lower is better)
Translates to: GCRGPSAIHLAGDCGLWLPWFGG*FREEPG
Trigger: CCCGGGCTCCTCCCGGAAGCACCCTCCAAACCAGGG...AAGCCACAGGCCACAGTCCCCCGCAAGGTGGATGGCGGAGGGACCTCTGCAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595908.5
3UTR-3UTR CCA 90 bp GTACACATAGCTGGAAGGGAGGGGTGGTCCCGGGGTAAGGACAGGGCTGCCCAAGGGGAGCTGGGCGCCTaGTCCACATGGACCCCCTCC +
Preference number: 2 (lower is better)
Translates to: VHIAGREGWSRGKDRAAQGELGA*STWTPS
Trigger: GGAGGGGGTCCATGTGGACCAGGCGCCCAGCTCCCC...TTGGGCAGCCCTGTCCTTACCCCGGGACCACCCCTCCCTTCCAGCTATGTGTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000264080.11
ENST00000594034.5
3UTR-3UTR CCA 90 bp CCTCGTCCTCCTGGGGCAGCTGCAGGTACGGGTTGTTTCCTGTGGGCTGGAACTGGGGAGCTGGGCGCCTaGTCCACATGGACCCCCTCC +
Preference number: 2 (lower is better)
Translates to: PRPPGAAAGTGCFLWAGTGELGA*STWTPS
Trigger: GGAGGGGGTCCATGTGGACCAGGCGCCCAGCTCCCC...AGTTCCAGCCCACAGGAAACAACCCGTACCTGCAGCTGCCCCAGGAGGACGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
3UTR-3UTR TCA 90 bp ACGAAGAAGGCCAGGGTGGAGCCCTCCACCAAGAGCTGGTACAGCCACTGCCACCGCAGACGAAGGATCTaGGCGAGCCCCCGGTCCCCA +
Preference number: 2 (lower is better)
Translates to: TKKARVEPSTKSWYSHCHRRRRI*ASPRSP
Trigger: TGGGGACCGGGGGCTCGCTCAGATCCTTCGTCTGCG...GTGGCAGTGGCTGTACCAGCTCTTGGTGGAGGGCTCCACCCTGGCCTTCTTCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595908.5
3UTR-3UTR CCA 90 bp CTCGTCCTCCTGGGGCAGCTGCAGGTACGGGTTGTTTCCTGTGGGCTGGAACTTGGGGTCCCGGGGAGCTaGGCGCCTGGTCCACATGGA +
Preference number: 2 (lower is better)
Translates to: LVLLGQLQVRVVSCGLELGVPGS*APGPHG
Trigger: TCCATGTGGACCAGGCGCCCAGCTCCCCGGGACCCC...AAGTTCCAGCCCACAGGAAACAACCCGTACCTGCAGCTGCCCCAGGAGGACGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
3UTR-3UTR GCA 90 bp CTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCCGGCAGGAGTGAGAAATaGTGGGGGAGGACGACCCTT +
Preference number: 2 (lower is better)
Translates to: LFFQMGLSGNRGPGELGAGRSEK*WGRTTL
Trigger: AAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCC...GGCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
3UTR-3UTR CCA 90 bp TACAAAGACACGGACCCTGTGCCCGCGCCCCCGCCACACACAGCGAAAACAGGTGCTGGAAGGGAGGGGTaGTCCCGGGGTAAGGACAGG +
Preference number: 2 (lower is better)
Translates to: YKDTDPVPAPPPHTAKTGAGREG*SRGKDR
Trigger: CCTGTCCTTACCCCGGGACCACCCCTCCCTTCCAGC...ACCTGTTTTCGCTGTGTGTGGCGGGGGCGCGGGCACAGGGTCCGTGTCTTTGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000264080.11
3UTR-3UTR CCA 90 bp GACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCAGCCCAGGTGCGTGTaGGCATCACACCAGGGAAAC +
Preference number: 2 (lower is better)
Translates to: DSSSKWACPGTGVPGSWAQPRCV*ASHQGN
Trigger: GTTTCCCTGGTGTGATGCCCACACGCACCTGGGCTG...CGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595908.5
3UTR-3UTR TCA 90 bp GCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGGGGAACTTGTAGCCCGTaGGCACGAAGAAGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: APGPHGPPPPPHIRCGRRGTCSP*ARRRPG
Trigger: CCCTGGCCTTCTTCGTGCTCACGGGCTACAAGTTCC...CCTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
3UTR-3UTR GCA 90 bp ACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCGGCAGGAGTGAGAAATaGTGGGGGAGGACGACCCTT +
Preference number: 2 (lower is better)
Translates to: TLLPNGLVREPGSRGAGRGRSEK*WGRTTL
Trigger: AAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCC...GCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
3UTR-3UTR GCA 90 bp ACGAAGAAGGCCAGGGTGGAGCCCTCCACCAAGAGCTGGTACAGCCACTGCCACAAGGGGCATCTCCGCTaGCGACAGGAAGCCATCGGG +
Preference number: 2 (lower is better)
Translates to: TKKARVEPSTKSWYSHCHKGHLR*RQEAIG
Trigger: CCCGATGGCTTCCTGTCGGCAGCGGAGATGCCCCTT...GTGGCAGTGGCTGTACCAGCTCTTGGTGGAGGGCTCCACCCTGGCCTTCTTCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595908.5
3UTR-3UTR CCA 90 bp CCTCGTCCTCCTGGGGCAGCTGCAGGTACGGGTTGTTTCCTGTGGGCTGGAACTACAGCACGTAGTCGCTaGCGCCTTCCTCGCGGGACT +
Preference number: 2 (lower is better)
Translates to: PRPPGAAAGTGCFLWAGTTARSR*RLPRGT
Trigger: AGTCCCGCGAGGAAGGCGCCAGCGACTACGTGCTGT...AGTTCCAGCCCACAGGAAACAACCCGTACCTGCAGCTGCCCCAGGAGGACGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
3UTR-3UTR CCA 90 bp ACGAAGAAGGCCAGGGTGGAGCCCTCCACCAAGAGCTGGTACAGCCACTGCCACTGGCTTCGGGAGCCCTaGTTTGGAGGGTGCTTCCGG +
Preference number: 2 (lower is better)
Translates to: TKKARVEPSTKSWYSHCHWLREP*FGGCFR
Trigger: CCGGAAGCACCCTCCAAACCAGGGCTCCCGAAGCCA...GTGGCAGTGGCTGTACCAGCTCTTGGTGGAGGGCTCCACCCTGGCCTTCTTCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595908.5
3UTR-3UTR CCA 90 bp TTGTTGAGGTGGCTCAGGCCCAACACCAGGTCCTTGTCCTTCCCACTAGGACCCCCTTGCGGGGGACTGTaGCCTGTGGCTTCGGGAGCC +
Preference number: 2 (lower is better)
Translates to: LLRWLRPNTRSLSFPLGPPCGGL*PVASGA
Trigger: GGCTCCCGAAGCCACAGGCCACAGTCCCCCGCAAGG...GGGTCCTAGTGGGAAGGACAAGGACCTGGTGTTGGGCCTGAGCCACCTCAACAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000595908.5
3UTR-3UTR CCA 90 bp GACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGAGGAGTGAGAAATGCTaGGGGAGGACGACCCTTTGG +
Preference number: 2 (lower is better)
Translates to: DSSSKWACPGTGVPGSWARSEKC*GRTTLW
Trigger: CCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCT...CGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
3UTR-3UTR CCA 90 bp GTCATTATTGTACACATAGCTGGAAGGGAGGGGTGGTCCCGGGGTAAGGACAGGGGGGTCCCGGGGAGCTaGGCGCCTGGTCCACATGGA +
Preference number: 2 (lower is better)
Translates to: VIIVHIAGREGWSRGKDRGVPGS*APGPHG
Trigger: TCCATGTGGACCAGGCGCCCAGCTCCCCGGGACCCC...CCTGTCCTTACCCCGGGACCACCCCTCCCTTCCAGCTATGTGTACAATAATGAC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000264080.11
ENST00000594034.5
3UTR-3UTR CCA 90 bp GCTCAGGCCCAACACCAGGTCCTTGTCCTTCCCACTAGGACCCTGAATCACTGCGCTGGAAGGGAGGGGTaGTCCCGGGGTAAGGACAGG +
Preference number: 2 (lower is better)
Translates to: AQAQHQVLVLPTRTLNHCAGREG*SRGKDR
Trigger: CCTGTCCTTACCCCGGGACCACCCCTCCCTTCCAGC...GCAGTGATTCAGGGTCCTAGTGGGAAGGACAAGGACCTGGTGTTGGGCCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595908.5
3UTR-3UTR CCA 90 bp CTCGTCCTCCTGGGGCAGCTGCAGGTACGGGTTGTTTCCTGTGGGCTGGAACTTACAGCACGTAGTCGCTaGCGCCTTCCTCGCGGGACT +
Preference number: 2 (lower is better)
Translates to: LVLLGQLQVRVVSCGLELTARSR*RLPRGT
Trigger: AGTCCCGCGAGGAAGGCGCCAGCGACTACGTGCTGT...AAGTTCCAGCCCACAGGAAACAACCCGTACCTGCAGCTGCCCCAGGAGGACGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
3UTR-3UTR GCA 90 bp CGGACCCTGTGCCCGCGCCCCCGCCACACACAGCGAAAACAGGTTTCTACATTGGGCAGGAGTGAGAAATaGTGGGGGAGGACGACCCTT +
Preference number: 2 (lower is better)
Translates to: RTLCPRPRHTQRKQVSTLGRSEK*WGRTTL
Trigger: AAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCC...CAATGTAGAAACCTGTTTTCGCTGTGTGTGGCGGGGGCGCGGGCACAGGGTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000264080.11
3UTR-3UTR GCA 90 bp CGCTGCCGACAGGAAGCCATCGGGGTTCTTCTCCCGGATCATCACCGTGATGTCCCTGATCAGCCCAGGTaGGTGTGGGCATCACACCAG +
Preference number: 2 (lower is better)
Translates to: RCRQEAIGVLLPDHHRDVPDQPR*VWASHQ
Trigger: CTGGTGTGATGCCCACACGCACCTGGGCTGATCAGG...GACATCACGGTGATGATCCGGGAGAAGAACCCCGATGGCTTCCTGTCGGCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595908.5
3UTR-3UTR CCA 90 bp GGGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAAGGAGTGAGAAATGCTaGGGGAGGACGACCCTTTGG +
Preference number: 2 (lower is better)
Translates to: GRLVHMDPLHLPTYAVEERSEKC*GRTTLW
Trigger: CCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCT...TTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
3UTR-3UTR CCA 90 bp GCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGGGACTCTTCTTCCAAATaGGCTTGTCCGGGAACCGGG +
Preference number: 2 (lower is better)
Translates to: APGPHGPPPPPHIRCGRRDSSSK*ACPGTG
Trigger: CCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGTC...CCTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
3UTR-3UTR CCA 90 bp GACACGGACCCTGTGCCCGCGCCCCCGCCACACACAGCGAAAACAGGTTTCTACGGGCTGCCCAATATTTaGGGGGAGGAAGGGACTCTT +
Preference number: 2 (lower is better)
Translates to: DTDPVPAPPPHTAKTGFYGLPNI*GEEGTL
Trigger: AAGAGTCCCTTCCTCCCCCCAAATATTGGGCAGCCC...GTAGAAACCTGTTTTCGCTGTGTGTGGCGGGGGCGCGGGCACAGGGTCCGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000264080.11
3UTR-3UTR CCA 90 bp GCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGGACGGGTTGTTTCCTGTaGGCTGGAACTTGTAGCCCG +
Preference number: 2 (lower is better)
Translates to: APGPHGPPPPPHIRCGRRTGCFL*AGTCSP
Trigger: CGGGCTACAAGTTCCAGCCCACAGGAAACAACCCGT...CCTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
3UTR-3UTR CCA 90 bp GCCCCCGCCACACACAGCGAAAACAGGTTTCTACATTGTAAACACAACCTCCGTGGGGAGCTGGGCGCCTaGTCCACATGGACCCCCTCC +
Preference number: 2 (lower is better)
Translates to: APATHSENRFLHCKHNLRGELGA*STWTPS
Trigger: GGAGGGGGTCCATGTGGACCAGGCGCCCAGCTCCCC...ACGGAGGTTGTGTTTACAATGTAGAAACCTGTTTTCGCTGTGTGTGGCGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000264080.11
3UTR-3UTR CCA 90 bp ACGAAGAAGGCCAGGGTGGAGCCCTCCACCAAGAGCTGGTACAGCCACTGCCACGGAACAGCTTCAGCTTaGCCAGGTTCACTGCCACCT +
Preference number: 2 (lower is better)
Translates to: TKKARVEPSTKSWYSHCHGTASA*PGSLPP
Trigger: AGGTGGCAGTGAACCTGGCCAAGCTGAAGCTGTTCC...GTGGCAGTGGCTGTACCAGCTCTTGGTGGAGGGCTCCACCCTGGCCTTCTTCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
3UTR-3UTR CCA 90 bp TACAAAGACACGGACCCTGTGCCCGCGCCCCCGCCACACACAGCGAAAACAGGTTATTGTACACATAGCTaGAAGGGAGGGGTGGTCCCG +
Preference number: 2 (lower is better)
Translates to: YKDTDPVPAPPPHTAKTGYCTHS*KGGVVP
Trigger: CGGGACCACCCCTCCCTTCCAGCTATGTGTACAATA...ACCTGTTTTCGCTGTGTGTGGCGGGGGCGCGGGCACAGGGTCCGTGTCTTTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264080.11
3UTR-3UTR GCA 90 bp CTGCAGGTACGGGTTGTTTCCTGTGGGCTGGAACTTGTAGCCCGTGAGCACGAAAAGGGCACAGCCACCTaGAGCAGGATGGCGATGATG +
Preference number: 2 (lower is better)
Translates to: LQVRVVSCGLELVAREHEKGTAT*SRMAMM
Trigger: CATCATCGCCATCCTGCTGCAGGTGGCTGTGCCCTT...TTCGTGCTCACGGGCTACAAGTTCCAGCCCACAGGAAACAACCCGTACCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597706.5
3UTR-3UTR GCA 90 bp GCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGGCTGGCACTGAATTGTTaGAGTTGTGGAAGTTCAGGC +
Preference number: 2 (lower is better)
Translates to: APGPHGPPPPPHIRCGRRLALNC*SCGSSG
Trigger: GCCTGAACTTCCACAACTGCAACAATTCAGTGCCAG...CCTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595908.5
3UTR-3UTR CCA 90 bp TTGTTGAGGTGGCTCAGGCCCAACACCAGGTCCTTGTCCTTCCCACTAGGACCCTCCCCACATACGCTGTaGAAGAAGGGCAGGAGTGAG +
Preference number: 2 (lower is better)
Translates to: LLRWLRPNTRSLSFPLGPSPHTL*KKGRSE
Trigger: CTCACTCCTGCCCTTCTTCCACAGCGTATGTGGGGA...GGGTCCTAGTGGGAAGGACAAGGACCTGGTGTTGGGCCTGAGCCACCTCAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595908.5
3UTR-3UTR CCA 90 bp CCACGTTGGCCAGGACCTGCATGGGGATCACGATCCCAAAGACCTTCTTCTCCTAGGAGTGAGAAATGCTaGGGGAGGACGACCCTTTGG +
Preference number: 2 (lower is better)
Translates to: PRWPGPAWGSRSQRPSSPRSEKC*GRTTLW
Trigger: CCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCT...AGGAGAAGAAGGTCTTTGGGATCGTGATCCCCATGCAGGTCCTGGCCAACGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
3UTR CAA 90 bp GGAGGTGATCATAACAGTTCCCGCCCGCTGGCTGTTTTGTTGACTTaGGAGAGGCCTTCCCGGAACCCAGAGTCCGTCATTACTTGCTCC +
Preference number: 2 (lower is better)
Translates to: GGDHNSSRPLAVLLT*ERPSRNPESVITCS
Trigger: GGAGCAAGTAATGACGGACTCTGGGTTCCGGGAAGGCCTCTCCAAAGTCAACAAAACAGCCAGCGGGCGGGAACTGTTATGATCACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
3UTR-3UTR GCA 90 bp GACCTGCATGGGGATCACGATCCCAAAGACCTTCTTCTCCTTATCCGACAGGACGGCAGGAGTGAGAAATaGTGGGGGAGGACGACCCTT +
Preference number: 2 (lower is better)
Translates to: DLHGDHDPKDLLLLIRQDGRSEK*WGRTTL
Trigger: AAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCC...GTCCTGTCGGATAAGGAGAAGAAGGTCTTTGGGATCGTGATCCCCATGCAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
3UTR-3UTR GCA 90 bp GTTCTTCTCCCGGATCATCACCGTGATGTCGAATGGATGCTCCTTTCCTGGCACACGTTGGCCAGGACCTaGATGGGGATCACGATCCCA +
Preference number: 2 (lower is better)
Translates to: VLLPDHHRDVEWMLLSWHTLART*MGITIP
Trigger: TGGGATCGTGATCCCCATGCAGGTCCTGGCCAACGT...GTGCCAGGAAAGGAGCATCCATTCGACATCACGGTGATGATCCGGGAGAAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595908.5
3UTR-3UTR GCA 90 bp GAACCCAGAGTCCGTCATTACTTGCTCCATCTGAACATCCTCCTCGTCCTCCTGGACGCATCCTGGAGATaGCGGATGGACCAGACTACG +
Preference number: 2 (lower is better)
Translates to: EPRVRHYLLHLNILLVLLDASWR*RMDQTT
Trigger: CGTAGTCTGGTCCATCCGGCATCTCCAGGATGCGTC...CAGGAGGACGAGGAGGATGTTCAGATGGAGCAAGTAATGACGGACTCTGGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
3UTR-3UTR CCA 90 bp TTTATTGAATATACAAAGACACGGACCCTGTGCCCGCGCCCCCGCCACACACAGAGGAGTGAGAAATGCTaGGGGAGGACGACCCTTTGG +
Preference number: 2 (lower is better)
Translates to: FIEYTKTRTLCPRPRHTQRSEKC*GRTTLW
Trigger: CCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCT...CTGTGTGTGGCGGGGGCGCGGGCACAGGGTCCGTGTCTTTGTATATTCAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264080.11
3UTR-3UTR CCA 90 bp TTTATTGAATATACAAAGACACGGACCCTGTGCCCGCGCCCCCGCCACACACAGGACTCTTCTTCCAAATaGGCTTGTCCGGGAACCGGG +
Preference number: 2 (lower is better)
Translates to: FIEYTKTRTLCPRPRHTQDSSSK*ACPGTG
Trigger: CCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGTC...CTGTGTGTGGCGGGGGCGCGGGCACAGGGTCCGTGTCTTTGTATATTCAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264080.11
3UTR CAA 90 bp CTGAGATGTGGAGGTGATCATAACAGTTCCCGCCCGCTGGCTGTTTaGTTGACTTTGGAGAGGCCTTCCCGGAACCCAGAGTCCGTCATT +
Preference number: 2 (lower is better)
Translates to: LRCGGDHNSSRPLAV*LTLERPSRNPESVI
Trigger: AATGACGGACTCTGGGTTCCGGGAAGGCCTCTCCAAAGTCAACAAAACAGCCAGCGGGCGGGAACTGTTATGATCACCTCCACATCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
3UTR-3UTR TCA 90 bp ACGATCCCAAAGACCTTCTTCTCCTTATCCGACAGGACGTACTTGATGAAGGCCTACAGCCACTGCCACTaGAAGGGCACAGCCACCTGC +
Preference number: 2 (lower is better)
Translates to: TIPKTFFSLSDRTYLMKAYSHCH*KGTATC
Trigger: GCAGGTGGCTGTGCCCTTTCAGTGGCAGTGGCTGTA...GGCCTTCATCAAGTACGTCCTGTCGGATAAGGAGAAGAAGGTCTTTGGGATCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597706.5
3UTR-3UTR CCA 90 bp ACGATCCCAAAGACCTTCTTCTCCTTATCCGACAGGACGTACTTGATGAAGGCCGTGCCAGACGCATCCTaGAGATGCCGGATGGACCAG +
Preference number: 2 (lower is better)
Translates to: TIPKTFFSLSDRTYLMKAVPDAS*RCRMDQ
Trigger: CTGGTCCATCCGGCATCTCCAGGATGCGTCTGGCAC...GGCCTTCATCAAGTACGTCCTGTCGGATAAGGAGAAGAAGGTCTTTGGGATCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
3UTR-3UTR CCA 90 bp TTCTCCCGGATCATCACCGTGATGTCGAATGGATGCTCCTTTCCTGGCACTGAACCATACTTCCGCACCTaGACCCTGATCAGCCCAGGT +
Preference number: 2 (lower is better)
Translates to: FSRIITVMSNGCSFPGTEPYFRT*TLISPG
Trigger: ACCTGGGCTGATCAGGGTCCAGGTGCGGAAGTATGG...TTCAGTGCCAGGAAAGGAGCATCCATTCGACATCACGGTGATGATCCGGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595908.5
3UTR CAA 90 bp AGATGTGGAGGTGATCATAACAGTTCCCGCCCGCTGGCTGTTTTGTaGACTTTGGAGAGGCCTTCCCGGAACCCAGAGTCCGTCATTACT +
Preference number: 2 (lower is better)
Translates to: RCGGDHNSSRPLAVL*TLERPSRNPESVIT
Trigger: AGTAATGACGGACTCTGGGTTCCGGGAAGGCCTCTCCAAAGTCAACAAAACAGCCAGCGGGCGGGAACTGTTATGATCACCTCCACATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
3UTR-3UTR GCA 90 bp ACGATCCCAAAGACCTTCTTCTCCTTATCCGACAGGACGTACTTGATGAAGGCCCCACCTTCCCGTCTGTaGCAGACGCATCCTGGAGAT +
Preference number: 2 (lower is better)
Translates to: TIPKTFFSLSDRTYLMKAPPSRL*QTHPGD
Trigger: ATCTCCAGGATGCGTCTGGCACAGACGGGAAGGTGG...GGCCTTCATCAAGTACGTCCTGTCGGATAAGGAGAAGAAGGTCTTTGGGATCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
3UTR-3UTR CCA 90 bp GATGACCATGACATAGTAATGCCGGAACAGCTTCAGCTTGGCCAGGTTCACTGCGGGCTGCCCAATATTTaGGGGGAGGAAGGGACTCTT +
Preference number: 2 (lower is better)
Translates to: DDHDIVMPEQLQLGQVHCGLPNI*GEEGTL
Trigger: AAGAGTCCCTTCCTCCCCCCAAATATTGGGCAGCCC...GCAGTGAACCTGGCCAAGCTGAAGCTGTTCCGGCATTACTATGTCATGGTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597706.5
3UTR-3UTR TCA 90 bp ACGATCCCAAAGACCTTCTTCTCCTTATCCGACAGGACGTACTTGATGAAGGCCCCCGGATCATCACCGTaGTGTCGAATGGATGCTCCT +
Preference number: 2 (lower is better)
Translates to: TIPKTFFSLSDRTYLMKAPGSSP*CRMDAP
Trigger: AGGAGCATCCATTCGACATCACGGTGATGATCCGGG...GGCCTTCATCAAGTACGTCCTGTCGGATAAGGAGAAGAAGGTCTTTGGGATCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595908.5
3UTR-3UTR CCA 90 bp CGACCCTTTGGTCTGAGATGTGGAGGTGATCATAACAGTTCCCGCCCGCTGGCTGAATTGTTGCAGTTGTaGAAGTTCAGGCTGTACTGG +
Preference number: 2 (lower is better)
Translates to: RPFGLRCGGDHNSSRPLAELLQL*KFRLYW
Trigger: CCAGTACAGCCTGAACTTCCACAACTGCAACAATTC...AGCCAGCGGGCGGGAACTGTTATGATCACCTCCACATCTCAGACCAAAGGGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595908.5
3UTR CAA 90 bp ATCATCACCGTGATGTCGAATGGATGCTCCTTTCCTGGCACTGAATaGTTGCAGTTGTGGAAGTTCAGGCTGTACTGGCCTTCTTCCGCC +
Preference number: 2 (lower is better)
Translates to: IITVMSNGCSFPGTE*LQLWKFRLYWPSSA
Trigger: GGCGGAAGAAGGCCAGTACAGCCTGAACTTCCACAACTGCAACAATTCAGTGCCAGGAAAGGAGCATCCATTCGACATCACGGTGATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
3UTR-3UTR GCA 90 bp TCCCGGATCATCACCGTGATGTCGAATGGATGCTCCTTTCCTGGCACTGAATTGGTGATGTCGAATGGATaGTCCTTTCCTGGCACTGAA +
Preference number: 2 (lower is better)
Translates to: SRIITVMSNGCSFPGTELVMSNG*SFPGTE
Trigger: TTCAGTGCCAGGAAAGGAGCATCCATTCGACATCAC...CAATTCAGTGCCAGGAAAGGAGCATCCATTCGACATCACGGTGATGATCCGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
3UTR CCA 72 bp CTTGCGGGGGACTGTGGCCTGTGGCTTCGGGAGCCCTaGTTTGGAGGGTGCTTCCGGGAGGAGCCCGGGAAA +
Preference number: 3 (lower is better)
Translates to: LAGDCGLWLREP*FGGCFREEPGK
Trigger: TTTCCCGGGCTCCTCCCGGAAGCACCCTCCAAACCAGGGCTCCCGAAGCCACAGGCCACAGTCCCCCGCAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595908.5
3UTR TCA 72 bp GGAGGGCGCCCTTCAGCAGGTGTGCGATGTAGTACATaGCGGCAAGGCCTTCGATGGGGTGGCCCTGGCTGT +
Preference number: 3 (lower is better)
Translates to: GGRPSAGVRCST*RQGLRWGGPGC
Trigger: ACAGCCAGGGCCACCCCATCGAAGGCCTTGCCGTCATGTACTACATCGCACACCTGCTGAAGGGCGCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595908.5
3UTR CCA 72 bp GACCCTGAATCACTGCGGGTGTTGACTTGGGCTTGCTaGCTGCAGAGGTCCCTCCGCCATCCACCTTGCGGG +
Preference number: 3 (lower is better)
Translates to: DPESLRVLTWAC*LQRSLRHPPCG
Trigger: CCCGCAAGGTGGATGGCGGAGGGACCTCTGCAGCCAGCAAGCCCAAGTCAACACCCGCAGTGATTCAGGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595908.5
3UTR-3UTR CAA 90 bp GCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGGAGCTGCAGGTACGGGTaGTTTCCTGTGGGCTGGAAC +
Preference number: 3 (lower is better)
Translates to: APGPHGPPPPPHIRCGRRSCRYG*FPVGWN
Trigger: GTTCCAGCCCACAGGAAACAACCCGTACCTGCAGCT...CCTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
3UTR-3UTR CAA 90 bp GCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGGCGCCCGCTGGCTGTTTaGTTGACTTTGGAGAGGCCT +
Preference number: 3 (lower is better)
Translates to: APGPHGPPPPPHIRCGRRRPLAV*LTLERP
Trigger: AGGCCTCTCCAAAGTCAACAAAACAGCCAGCGGGCG...CCTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
3UTR TCA 72 bp GTCCTTCCCACTAGGACCCTGAATCACTGCGGGTGTTaGCTTGGGCTTGCTGGCTGCAGAGGTCCCTCCGCC +
Preference number: 3 (lower is better)
Translates to: VLPTRTLNHCGC*LGLAGCRGPSA
Trigger: GGCGGAGGGACCTCTGCAGCCAGCAAGCCCAAGTCAACACCCGCAGTGATTCAGGGTCCTAGTGGGAAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595908.5
3UTR CCA 72 bp TTCACTGCCACCTTCCCGTCTGTGCCAGACGCATCCTaGAGATGCCGGATGGACCAGACTACGGGGAACAGG +
Preference number: 3 (lower is better)
Translates to: FTATFPSVPDAS*RCRMDQTTGNR
Trigger: CCTGTTCCCCGTAGTCTGGTCCATCCGGCATCTCCAGGATGCGTCTGGCACAGACGGGAAGGTGGCAGTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
3UTR CCA 72 bp CTTCCGCACCTGGACCCTGATCAGCCCAGGTGCGTGTaGGCATCACACCAGGGAAACGCAGACGAAGGATCT +
Preference number: 3 (lower is better)
Translates to: LPHLDPDQPRCV*ASHQGNADEGS
Trigger: AGATCCTTCGTCTGCGTTTCCCTGGTGTGATGCCCACACGCACCTGGGCTGATCAGGGTCCAGGTGCGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595908.5
3UTR-3UTR CAA 90 bp CTCGTCCTCCTGGGGCAGCTGCAGGTACGGGTTGTTTCCTGTGGGCTGGAACTTTCCGACAGGACGTACTaGATGAAGGCCCAGCCTGAG +
Preference number: 3 (lower is better)
Translates to: LVLLGQLQVRVVSCGLELSDRTY*MKAQPE
Trigger: CTCAGGCTGGGCCTTCATCAAGTACGTCCTGTCGGA...AAGTTCCAGCCCACAGGAAACAACCCGTACCTGCAGCTGCCCCAGGAGGACGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
3UTR-3UTR CAA 90 bp CGACCCTTTGGTCTGAGATGTGGAGGTGATCATAACAGTTCCCGCCCGCTGGCTGGTGTTGACTTGGGCTaGCTGGCTGCAGAGGTCCCT +
Preference number: 3 (lower is better)
Translates to: RPFGLRCGGDHNSSRPLAGVDLG*LAAEVP
Trigger: AGGGACCTCTGCAGCCAGCAAGCCCAAGTCAACACC...AGCCAGCGGGCGGGAACTGTTATGATCACCTCCACATCTCAGACCAAAGGGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595908.5
3UTR CCA 72 bp GGTGGTCCCGGGGTAAGGACAGGGCTGCCCAATATTTaGGGGGAGGAAGGGACTCTTCTTCCAAATGGGCTT +
Preference number: 3 (lower is better)
Translates to: GGPGVRTGLPNI*GEEGTLLPNGL
Trigger: AAGCCCATTTGGAAGAAGAGTCCCTTCCTCCCCCCAAATATTGGGCAGCCCTGTCCTTACCCCGGGACCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
3UTR-3UTR CAA 90 bp GACCTGCATGGGGATCACGATCCCAAAGACCTTCTTCTCCTTATCCGACAGGACTTCTTCCAAATGGGCTaGTCCGGGAACCGGGGTCCC +
Preference number: 3 (lower is better)
Translates to: DLHGDHDPKDLLLLIRQDFFQMG*SGNRGP
Trigger: GGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAA...GTCCTGTCGGATAAGGAGAAGAAGGTCTTTGGGATCGTGATCCCCATGCAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
3UTR GCA 72 bp TCCGGGAGGAGCCCGGGAAAGATAAACAACGTCTTCTaGTCTCCATACTTCCGCACCTGGACCCTGATCAGC +
Preference number: 3 (lower is better)
Translates to: SGRSPGKINNVF*SPYFRTWTLIS
Trigger: GCTGATCAGGGTCCAGGTGCGGAAGTATGGAGAGCAGAAGACGTTGTTTATCTTTCCCGGGCTCCTCCCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595908.5
3UTR-3UTR CAA 90 bp CTGCAGGTACGGGTTGTTTCCTGTGGGCTGGAACTTGTAGCCCGTGAGCACGAAGCTGTTTTGTTGACTTaGGAGAGGCCTTCCCGGAAC +
Preference number: 3 (lower is better)
Translates to: LQVRVVSCGLELVAREHEAVLLT*ERPSRN
Trigger: GTTCCGGGAAGGCCTCTCCAAAGTCAACAAAACAGC...TTCGTGCTCACGGGCTACAAGTTCCAGCCCACAGGAAACAACCCGTACCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
3UTR-3UTR CAA 90 bp CTGCATGGGGATCACGATCCCAAAGACCTTCTTCTCCTTATCCGACAGGACGTAAGCTGCAGGTACGGGTaGTTTCCTGTGGGCTGGAAC +
Preference number: 3 (lower is better)
Translates to: LHGDHDPKDLLLLIRQDVSCRYG*FPVGWN
Trigger: GTTCCAGCCCACAGGAAACAACCCGTACCTGCAGCT...TACGTCCTGTCGGATAAGGAGAAGAAGGTCTTTGGGATCGTGATCCCCATGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
3UTR-3UTR CAA 90 bp ACGATCCCAAAGACCTTCTTCTCCTTATCCGACAGGACGTACTTGATGAAGGCCACTGCGGGTGTTGACTaGGGCTTGCTGGCTGCAGAG +
Preference number: 3 (lower is better)
Translates to: TIPKTFFSLSDRTYLMKATAGVD*GLLAAE
Trigger: CTCTGCAGCCAGCAAGCCCAAGTCAACACCCGCAGT...GGCCTTCATCAAGTACGTCCTGTCGGATAAGGAGAAGAAGGTCTTTGGGATCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595908.5
3UTR-3UTR CAA 90 bp ACGATCCCAAAGACCTTCTTCTCCTTATCCGACAGGACGTACTTGATGAAGGCCTCCGACAGGACGTACTaGATGAAGGCCCAGCCTGAG +
Preference number: 3 (lower is better)
Translates to: TIPKTFFSLSDRTYLMKASDRTY*MKAQPE
Trigger: CTCAGGCTGGGCCTTCATCAAGTACGTCCTGTCGGA...GGCCTTCATCAAGTACGTCCTGTCGGATAAGGAGAAGAAGGTCTTTGGGATCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
3UTR-3UTR CAA 90 bp CTGCAGGTACGGGTTGTTTCCTGTGGGCTGGAACTTGTAGCCCGTGAGCACGAAAGAGTCCGTCATTACTaGCTCCATCTGAACATCCTC +
Preference number: 3 (lower is better)
Translates to: LQVRVVSCGLELVAREHERVRHY*LHLNIL
Trigger: GAGGATGTTCAGATGGAGCAAGTAATGACGGACTCT...TTCGTGCTCACGGGCTACAAGTTCCAGCCCACAGGAAACAACCCGTACCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
3UTR CCA 72 bp TTGGTCATTATTGTACACATAGCTGGAAGGGAGGGGTaGTCCCGGGGTAAGGACAGGGCTGCCCAATATTTG +
Preference number: 3 (lower is better)
Translates to: LVIIVHIAGREG*SRGKDRAAQYL
Trigger: CAAATATTGGGCAGCCCTGTCCTTACCCCGGGACCACCCCTCCCTTCCAGCTATGTGTACAATAATGACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264080.11
3UTR-3UTR CAA 90 bp CTGCATGGGGATCACGATCCCAAAGACCTTCTTCTCCTTATCCGACAGGACGTAGCTGTTTTGTTGACTTaGGAGAGGCCTTCCCGGAAC +
Preference number: 3 (lower is better)
Translates to: LHGDHDPKDLLLLIRQDVAVLLT*ERPSRN
Trigger: GTTCCGGGAAGGCCTCTCCAAAGTCAACAAAACAGC...TACGTCCTGTCGGATAAGGAGAAGAAGGTCTTTGGGATCGTGATCCCCATGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
3UTR-3UTR CAA 90 bp CGACAGGAAGCCATCGGGGTTCTTCTCCCGGATCATCACCGTGATGTCGAATGGACTGAATTGTTGCAGTaGTGGAAGTTCAGGCTGTAC +
Preference number: 3 (lower is better)
Translates to: RQEAIGVLLPDHHRDVEWTELLQ*WKFRLY
Trigger: GTACAGCCTGAACTTCCACAACTGCAACAATTCAGT...CCATTCGACATCACGGTGATGATCCGGGAGAAGAACCCCGATGGCTTCCTGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
3UTR GCA 72 bp TTCTTCTCCCGGATCATCACCGTGATGTCGAATGGATaGTCCTTTCCTGGCACTGAATTGTTGCAGTTGTGG +
Preference number: 3 (lower is better)
Translates to: FFSRIITVMSNG*SFPGTELLQLW
Trigger: CCACAACTGCAACAATTCAGTGCCAGGAAAGGAGCATCCATTCGACATCACGGTGATGATCCGGGAGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR CCA 90 bp CTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCCGGGGAGCTGGGCGCCTaGTCCACATGGACCCCCTCC +
Preference number: 4 (lower is better)
Translates to: LFFQMGLSGNRGPGELGAGELGA*STWTPS
Trigger: GGAGGGGGTCCATGTGGACCAGGCGCCCAGCTCCCC...GGCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp CTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCCGTCAGCGCCAGCTGGTaGATGCGCCCGGAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LFFQMGLSGNRGPGELGAVSASW*MRPEQP
Trigger: TGGCTGCTCCGGGCGCATCCACCAGCTGGCGCTGAC...GGCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264080.11
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp ACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCCCCGTCAGCGCCAGCTaGTGGATGCGCCCGGAGCAG +
Preference number: 4 (lower is better)
Translates to: TLLPNGLVREPGSRGAGRPVSAS*WMRPEQ
Trigger: CTGCTCCGGGCGCATCCACCAGCTGGCGCTGACGGG...GCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264080.11
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp ACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCGGGGTCCCGGGGAGCTaGGCGCCTGGTCCACATGGA +
Preference number: 4 (lower is better)
Translates to: TLLPNGLVREPGSRGAGRGVPGS*APGPHG
Trigger: TCCATGTGGACCAGGCGCCCAGCTCCCCGGGACCCC...GCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp CTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCCCCCCCTCGGCGTGCCTaGCCTTCACCTTCCCGAAGA +
Preference number: 4 (lower is better)
Translates to: LFFQMGLSGNRGPGELGAPPRRA*PSPSRR
Trigger: TCTTCGGGAAGGTGAAGGTCAGGCACGCCGAGGGGG...GGCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAG
68% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000430424.8
CDS-3UTR GCA 90 bp CTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCCCAGGGACTTCTCTTCTaGCTCCCGGAGGCCCAGCCG +
Preference number: 4 (lower is better)
Translates to: LFFQMGLSGNRGPGELGAQGLLF*LPEAQP
Trigger: CGGCTGGGCCTCCGGGAGGCAGAAGAGAAGTCCCTG...GGCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp TGGGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGACCCGTCAGCGCCAGCTaGTGGATGCGCCCGGAGCAG +
Preference number: 4 (lower is better)
Translates to: WAPGPHGPPPPPHIRCGRPVSAS*WMRPEQ
Trigger: CTGCTCCGGGCGCATCCACCAGCTGGCGCTGACGGG...TCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264080.11
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGGGGGTCCCGGGGAGCTaGGCGCCTGGTCCACATGGA +
Preference number: 4 (lower is better)
Translates to: GAWSTWTPSTSPHTLWKKGVPGS*APGPHG
Trigger: TCCATGTGGACCAGGCGCCCAGCTCCCCGGGACCCC...CTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp AGGGACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGACCAGAAGTAGCCGCTaGCCCCACTCCGCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: RDSSSKWACPGTGVPGSWTRSSR*PHSAGL
Trigger: GAGCCCCGCGGAGTGGGGGCAGCGGCTACTTCTGGT...CCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000264080.11
ENST00000597706.5
CDS-3UTR GCA 90 bp TGGGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGACCCTGGTTTGGAGGGTaGTTCCGGGAGGAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: WAPGPHGPPPPPHIRCGRPWFGG*FREEPG
Trigger: CCCGGGCTCCTCCCGGAAGCACCCTCCAAACCAGGG...TCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp CTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCCAAGGGGCATCTCCGCTaGCGACAGGAAGCCATCGGG +
Preference number: 4 (lower is better)
Translates to: LFFQMGLSGNRGPGELGAKGHLR*RQEAIG
Trigger: CCCGATGGCTTCCTGTCGGCAGCGGAGATGCCCCTT...GGCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp GACACGGACCCTGTGCCCGCGCCCCCGCCACACACAGCGAAAACAGGTTTCTACAAGACACGGACCCTGTaGCCGCGCCCCCGCCACACA +
Preference number: 4 (lower is better)
Translates to: DTDPVPAPPPHTAKTGFYKTRTL*PRPRHT
Trigger: TGTGTGGCGGGGGCGCGGGCACAGGGTCCGTGTCTT...GTAGAAACCTGTTTTCGCTGTGTGTGGCGGGGGCGCGGGCACAGGGTCCGTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR CCA 90 bp GCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGGGTCAGCGCCAGCTGGTaGATGCGCCCGGAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: APGPHGPPPPPHIRCGRRVSASW*MRPEQP
Trigger: TGGCTGCTCCGGGCGCATCCACCAGCTGGCGCTGAC...CCTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264080.11
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp CTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCCTCGGGAGCCCTGGTTTaGAGGGTGCTTCCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: LFFQMGLSGNRGPGELGASGALV*RVLPGG
Trigger: TCCTCCCGGAAGCACCCTCCAAACCAGGGCTCCCGA...GGCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGGCCTTGCGGGGGACTGTaGCCTGTGGCTTCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: APGPHGPPPPPHIRCGRRPCGGL*PVASGA
Trigger: GGCTCCCGAAGCCACAGGCCACAGTCCCCCGCAAGG...CCTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp ACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCGCTGGAAGGGAGGGGTaGTCCCGGGGTAAGGACAGG +
Preference number: 4 (lower is better)
Translates to: TLLPNGLVREPGSRGAGRAGREG*SRGKDR
Trigger: CCTGTCCTTACCCCGGGACCACCCCTCCCTTCCAGC...GCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
CDS-3UTR GCA 90 bp CTCGTCCTCCTGGGGCAGCTGCAGGTACGGGTTGTTTCCTGTGGGCTGGAACTTGCGCCAGCTGGTGGATaGGCCCGGAGCAGCCACCCA +
Preference number: 4 (lower is better)
Translates to: LVLLGQLQVRVVSCGLELAPAGG*ARSSHP
Trigger: TGGGTGGCTGCTCCGGGCGCATCCACCAGCTGGCGC...AAGTTCCAGCCCACAGGAAACAACCCGTACCTGCAGCTGCCCCAGGAGGACGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp GGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGCAGGGACTTCTCTTCTaGCTCCCGGAGGCCCAGCCG +
Preference number: 4 (lower is better)
Translates to: GAWSTWTPSTSPHTLWKKQGLLF*LPEAQP
Trigger: CGGCTGGGCCTCCGGGAGGCAGAAGAGAAGTCCCTG...CTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp CTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCCCTTGGCCAGGTTCACTaGCACCTTCCCGTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: LFFQMGLSGNRGPGELGALGQVH*HLPVCA
Trigger: GGCACAGACGGGAAGGTGGCAGTGAACCTGGCCAAG...GGCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGTCGGGAGCCCTGGTTTaGAGGGTGCTTCCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: DSSSKWACPGTGVPGSWASGALV*RVLPGG
Trigger: TCCTCCCGGAAGCACCCTCCAAACCAGGGCTCCCGA...CGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp ACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCGGGGACTGTGGCCTGTaGCTTCGGGAGCCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: TLLPNGLVREPGSRGAGRGDCGL*LREPWF
Trigger: AAACCAGGGCTCCCGAAGCCACAGGCCACAGTCCCC...GCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp ACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCACAGCACGTAGTCGCTaGCGCCTTCCTCGCGGGACT +
Preference number: 4 (lower is better)
Translates to: TLLPNGLVREPGSRGAGRTARSR*RLPRGT
Trigger: AGTCCCGCGAGGAAGGCGCCAGCGACTACGTGCTGT...GCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp CTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCCCGAAGAAGGCCAGGGTaGAGCCCTCCACCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: LFFQMGLSGNRGPGELGARRRPG*SPPPRA
Trigger: AGCTCTTGGTGGAGGGCTCCACCCTGGCCTTCTTCG...GGCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GGGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGCTGGAAGGGAGGGGTaGTCCCGGGGTAAGGACAGG +
Preference number: 4 (lower is better)
Translates to: GRLVHMDPLHLPTYAVEEAGREG*SRGKDR
Trigger: CCTGTCCTTACCCCGGGACCACCCCTCCCTTCCAGC...TTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
CDS-3UTR CCA 90 bp ACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCGTAGTCCCCAAGAGATaGAGCCTCGCCCCCGAAGGG +
Preference number: 4 (lower is better)
Translates to: TLLPNGLVREPGSRGAGRVVPKR*SLAPEG
Trigger: CCCTTCGGGGGCGAGGCTCCATCTCTTGGGGACTAC...GCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000430424.8
CDS-3UTR TCA 90 bp GGGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAATGGCCTTCTTCCGCCTaGGAGCCGATCACCACGTGG +
Preference number: 4 (lower is better)
Translates to: GRLVHMDPLHLPTYAVEEWPSSA*EPITTW
Trigger: CCACGTGGTGATCGGCTCTCAGGCGGAAGAAGGCCA...TTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp CTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCCTACAGCCACTGCCACTaGAAGGGCACAGCCACCATG +
Preference number: 4 (lower is better)
Translates to: LFFQMGLSGNRGPGELGAYSHCH*KGTATM
Trigger: CATGGTGGCTGTGCCCTTTCAGTGGCAGTGGCTGTA...GGCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594034.5
ENST00000595908.5
CDS-3UTR TCA 90 bp CTGGGGCAGCTGCAGGTACGGGTTGTTTCCTGTGGGCTGGAACTTGTAGCCCGTCGCAGACGAAGGATCTaGGCGAGCCCCCGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: LGQLQVRVVSCGLELVARRRRRI*ASPRSP
Trigger: TGGGGACCGGGGGCTCGCTCAGATCCTTCGTCTGCG...ACGGGCTACAAGTTCCAGCCCACAGGAAACAACCCGTACCTGCAGCTGCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000595908.5
CDS-3UTR GCA 90 bp TCGTCCTCCTGGGGCAGCTGCAGGTACGGGTTGTTTCCTGTGGGCTGGAACTTGACCAGAAGTAGCCGCTaGCCCCACTCCGCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: SSSWGSCRYGLFPVGWNLTRSSR*PHSAGL
Trigger: GAGCCCCGCGGAGTGGGGGCAGCGGCTACTTCTGGT...CAAGTTCCAGCCCACAGGAAACAACCCGTACCTGCAGCTGCCCCAGGAGGACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000597706.5
CDS-3UTR GCA 90 bp AAGGGGCATCTCCGCTGCCGACAGGAAGCCATCGGGGTTCTTCTCCCGGATCATCCCTGGTTTGGAGGGTaGTTCCGGGAGGAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: KGHLRCRQEAIGVLLPDHPWFGG*FREEPG
Trigger: CCCGGGCTCCTCCCGGAAGCACCCTCCAAACCAGGG...ATGATCCGGGAGAAGAACCCCGATGGCTTCCTGTCGGCAGCGGAGATGCCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR GCA 90 bp GGGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAAAGGGGCATCTCCGCTaGCGACAGGAAGCCATCGGG +
Preference number: 4 (lower is better)
Translates to: GRLVHMDPLHLPTYAVEEKGHLR*RQEAIG
Trigger: CCCGATGGCTTCCTGTCGGCAGCGGAGATGCCCCTT...TTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp ACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCTGGACACCCAGAAGATaGCAGCGGCCAGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: TLLPNGLVREPGSRGAGRWTPRR*QRPGSR
Trigger: CCTGCTTCCTGGCCGCTGGCATCTTCTGGGTGTCCA...GCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp GACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGTGGACACCCAGAAGATaGCAGCGGCCAGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: DSSSKWACPGTGVPGSWAWTPRR*QRPGSR
Trigger: CCTGCTTCCTGGCCGCTGGCATCTTCTGGGTGTCCA...CGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp CTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCCCCACCTTCCCGTCTGTaGCAGACGCATCCTGGAGAT +
Preference number: 4 (lower is better)
Translates to: LFFQMGLSGNRGPGELGAPPSRL*QTHPGD
Trigger: ATCTCCAGGATGCGTCTGGCACAGACGGGAAGGTGG...GGCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp CTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCCAAGGGCACAGCCACCTaGAGCAGGATGGCGATGATG +
Preference number: 4 (lower is better)
Translates to: LFFQMGLSGNRGPGELGAKGTAT*SRMAMM
Trigger: CATCATCGCCATCCTGCTGCAGGTGGCTGTGCCCTT...GGCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000597706.5
CDS-3UTR CCA 90 bp GCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGGGCTCACTGCCATCTCTaGAGCCACCTCCTCCCCGAC +
Preference number: 4 (lower is better)
Translates to: APGPHGPPPPPHIRCGRRAHCHL*SHLLPD
Trigger: GTCGGGGAGGAGGTGGCTCCAGAGATGGCAGTGAGC...CCTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR CCA 90 bp GGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGGGGGACTGTGGCCTGTaGCTTCGGGAGCCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: GAWSTWTPSTSPHTLWKKGDCGL*LREPWF
Trigger: AAACCAGGGCTCCCGAAGCCACAGGCCACAGTCCCC...CTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp CTCGTCCTCCTGGGGCAGCTGCAGGTACGGGTTGTTTCCTGTGGGCTGGAACTTCCTTGCGGGGGACTGTaGCCTGTGGCTTCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: LVLLGQLQVRVVSCGLELPCGGL*PVASGA
Trigger: GGCTCCCGAAGCCACAGGCCACAGTCCCCCGCAAGG...AAGTTCCAGCCCACAGGAAACAACCCGTACCTGCAGCTGCCCCAGGAGGACGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGTTGACTTGGGCTTGCTaGCTGCAGAGGTCCCTCCGC +
Preference number: 4 (lower is better)
Translates to: DSSSKWACPGTGVPGSWALTWAC*LQRSLR
Trigger: GCGGAGGGACCTCTGCAGCCAGCAAGCCCAAGTCAA...CGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGACAGCACGTAGTCGCTaGCGCCTTCCTCGCGGGACT +
Preference number: 4 (lower is better)
Translates to: GAWSTWTPSTSPHTLWKKTARSR*RLPRGT
Trigger: AGTCCCGCGAGGAAGGCGCCAGCGACTACGTGCTGT...CTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGGTGCCAGACGCATCCTaGAGATGCCGGATGGACCAG +
Preference number: 4 (lower is better)
Translates to: DSSSKWACPGTGVPGSWAVPDAS*RCRMDQ
Trigger: CTGGTCCATCCGGCATCTCCAGGATGCGTCTGGCAC...CGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp CTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCCGTGCGATGTAGTACATaGCGGCAAGGCCTTCGATGG +
Preference number: 4 (lower is better)
Translates to: LFFQMGLSGNRGPGELGAVRCST*RQGLRW
Trigger: CCATCGAAGGCCTTGCCGTCATGTACTACATCGCAC...GGCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp GCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGGTACAGCCACTGCCACTaGAAGGGCACAGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: APGPHGPPPPPHIRCGRRYSHCH*KGTATC
Trigger: GCAGGTGGCTGTGCCCTTTCAGTGGCAGTGGCTGTA...CCTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000597706.5
CDS-3UTR TCA 90 bp GACACGGACCCTGTGCCCGCGCCCCCGCCACACACAGCGAAAACAGGTTTCTACGGAACTTGTAGCCCGTaGGCACGAAGAAGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: DTDPVPAPPPHTAKTGFYGTCSP*ARRRPG
Trigger: CCCTGGCCTTCTTCGTGCTCACGGGCTACAAGTTCC...GTAGAAACCTGTTTTCGCTGTGTGTGGCGGGGGCGCGGGCACAGGGTCCGTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR TCA 90 bp GGGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGGAACTTGTAGCCCGTaGGCACGAAGAAGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GRLVHMDPLHLPTYAVEEGTCSP*ARRRPG
Trigger: CCCTGGCCTTCTTCGTGCTCACGGGCTACAAGTTCC...TTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp TGTGGAAGAAGGGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGGCGCCAGCTGGTGGATaGGCCCGGAGCAGCCACCCA +
Preference number: 4 (lower is better)
Translates to: CGRRAGVRNAGGGRPFGLAPAGG*ARSSHP
Trigger: TGGGTGGCTGCTCCGGGCGCATCCACCAGCTGGCGC...CAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCCCTTCTTCCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264080.11
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp GACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGACGTTGGCCAGGACCTaGATGGGGATCACGATCCCA +
Preference number: 4 (lower is better)
Translates to: DSSSKWACPGTGVPGSWATLART*MGITIP
Trigger: TGGGATCGTGATCCCCATGCAGGTCCTGGCCAACGT...CGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp GCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGGCTTGGCCAGGTTCACTaGCACCTTCCCGTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: APGPHGPPPPPHIRCGRRLGQVH*HLPVCA
Trigger: GGCACAGACGGGAAGGTGGCAGTGAACCTGGCCAAG...CCTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCCGAAGCTGTTCAGCTaGATGTCCGCTCGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: DSSSKWACPGTGVPGSWAPKLFS*MSARFS
Trigger: GGAGAAGCGAGCGGACATCCAGCTGAACAGCTTCGG...CGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp CCTCGTCCTCCTGGGGCAGCTGCAGGTACGGGTTGTTTCCTGTGGGCTGGAACTTGGCTTCGGGAGCCCTaGTTTGGAGGGTGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: PRPPGAAAGTGCFLWAGTWLREP*FGGCFR
Trigger: CCGGAAGCACCCTCCAAACCAGGGCTCCCGAAGCCA...AGTTCCAGCCCACAGGAAACAACCCGTACCTGCAGCTGCCCCAGGAGGACGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp TGGGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGATTGACTTGGGCTTGCTaGCTGCAGAGGTCCCTCCGC +
Preference number: 4 (lower is better)
Translates to: WAPGPHGPPPPPHIRCGRLTWAC*LQRSLR
Trigger: GCGGAGGGACCTCTGCAGCCAGCAAGCCCAAGTCAA...TCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp CGGACCCTGTGCCCGCGCCCCCGCCACACACAGCGAAAACAGGTTTCTACATTGACAGCACGTAGTCGCTaGCGCCTTCCTCGCGGGACT +
Preference number: 4 (lower is better)
Translates to: RTLCPRPRHTQRKQVSTLTARSR*RLPRGT
Trigger: AGTCCCGCGAGGAAGGCGCCAGCGACTACGTGCTGT...CAATGTAGAAACCTGTTTTCGCTGTGTGTGGCGGGGGCGCGGGCACAGGGTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR CCA 90 bp GCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGGGTGCCAGACGCATCCTaGAGATGCCGGATGGACCAG +
Preference number: 4 (lower is better)
Translates to: APGPHGPPPPPHIRCGRRVPDAS*RCRMDQ
Trigger: CTGGTCCATCCGGCATCTCCAGGATGCGTCTGGCAC...CCTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp TGGGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAGTGCCAGACGCATCCTaGAGATGCCGGATGGACCAG +
Preference number: 4 (lower is better)
Translates to: WAPGPHGPPPPPHIRCGRVPDAS*RCRMDQ
Trigger: CTGGTCCATCCGGCATCTCCAGGATGCGTCTGGCAC...TCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGGCGAAGAAGGCCAGGGTaGAGCCCTCCACCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: APGPHGPPPPPHIRCGRRRRRPG*SPPPRA
Trigger: AGCTCTTGGTGGAGGGCTCCACCCTGGCCTTCTTCG...CCTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GGCTGCAGAGGTCCCTCCGCCATCCACCTTGCGGGGGACTGTGGCCTGTGGCTTAGGAGTGAGAAATGCTaGGGGAGGACGACCCTTTGG +
Preference number: 4 (lower is better)
Translates to: GCRGPSAIHLAGDCGLWLRSEKC*GRTTLW
Trigger: CCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCT...AAGCCACAGGCCACAGTCCCCCGCAAGGTGGATGGCGGAGGGACCTCTGCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595908.5
CDS-3UTR CCA 90 bp CTGCAGGTACGGGTTGTTTCCTGTGGGCTGGAACTTGTAGCCCGTGAGCACGAAGGGGTCCCGGGGAGCTaGGCGCCTGGTCCACATGGA +
Preference number: 4 (lower is better)
Translates to: LQVRVVSCGLELVAREHEGVPGS*APGPHG
Trigger: TCCATGTGGACCAGGCGCCCAGCTCCCCGGGACCCC...TTCGTGCTCACGGGCTACAAGTTCCAGCCCACAGGAAACAACCCGTACCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp GGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGAATCACTGCGGGTGTTaGCTTGGGCTTGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GAWSTWTPSTSPHTLWKKNHCGC*LGLAGC
Trigger: GCAGCCAGCAAGCCCAAGTCAACACCCGCAGTGATT...CTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp CTCGTCCTCCTGGGGCAGCTGCAGGTACGGGTTGTTTCCTGTGGGCTGGAACTTTGGCCTTCTTCCGCCTaGGAGCCGATCACCACGTGG +
Preference number: 4 (lower is better)
Translates to: LVLLGQLQVRVVSCGLELWPSSA*EPITTW
Trigger: CCACGTGGTGATCGGCTCTCAGGCGGAAGAAGGCCA...AAGTTCCAGCCCACAGGAAACAACCCGTACCTGCAGCTGCCCCAGGAGGACGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp ACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCGTGCGATGTAGTACATaGCGGCAAGGCCTTCGATGG +
Preference number: 4 (lower is better)
Translates to: TLLPNGLVREPGSRGAGRVRCST*RQGLRW
Trigger: CCATCGAAGGCCTTGCCGTCATGTACTACATCGCAC...GCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp CTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCCTGGCACCACAGCAGATaGGGTCCACCAGGAACAAAA +
Preference number: 4 (lower is better)
Translates to: LFFQMGLSGNRGPGELGAWHHSR*GPPGTK
Trigger: TTTTGTTCCTGGTGGACCTCATCTGCTGTGGTGCCA...GGCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp GACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCGCTGGCTGTTTTGTTaGCTTTGGAGAGGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: DSSSKWACPGTGVPGSWARWLFC*LWRGLP
Trigger: GGGAAGGCCTCTCCAAAGTCAACAAAACAGCCAGCG...CGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp CTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCCAGGGCACAGCCACCATaGCATAGTAATGCCGGAACA +
Preference number: 4 (lower is better)
Translates to: LFFQMGLSGNRGPGELGARAQPP*HSNAGT
Trigger: TGTTCCGGCATTACTATGTCATGGTGGCTGTGCCCT...GGCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594034.5
ENST00000595908.5
CDS-3UTR GCA 90 bp GACAGGACGTACTTGATGAAGGCCCAGCCTGAGCCAATCAGGGCGATGGTGATGCCCTGGTTTGGAGGGTaGTTCCGGGAGGAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: DRTYLMKAQPEPIRAMVMPWFGG*FREEPG
Trigger: CCCGGGCTCCTCCCGGAAGCACCCTCCAAACCAGGG...CATCACCATCGCCCTGATTGGCTCAGGCTGGGCCTTCATCAAGTACGTCCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp ACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCGCCCTTCAGCAGGTGTaGGATGTAGTACATGACGGC +
Preference number: 4 (lower is better)
Translates to: TLLPNGLVREPGSRGAGRALQQV*DVVHDG
Trigger: GCCGTCATGTACTACATCGCACACCTGCTGAAGGGC...GCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
CDS-3UTR GCA 90 bp GCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGGACGTTGGCCAGGACCTaGATGGGGATCACGATCCCA +
Preference number: 4 (lower is better)
Translates to: APGPHGPPPPPHIRCGRRTLART*MGITIP
Trigger: TGGGATCGTGATCCCCATGCAGGTCCTGGCCAACGT...CCTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp TGGGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGATCCTCCTGGGGCAGCTaGAGGTACGGGTTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: WAPGPHGPPPPPHIRCGRSSWGS*RYGLFP
Trigger: AGGAAACAACCCGTACCTGCAGCTGCCCCAGGAGGA...TCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp GACACGGACCCTGTGCCCGCGCCCCCGCCACACACAGCGAAAACAGGTTTCTACGGCAGGAGTGAGAAATaGTGGGGGAGGACGACCCTT +
Preference number: 4 (lower is better)
Translates to: DTDPVPAPPPHTAKTGFYGRSEK*WGRTTL
Trigger: AAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCC...GTAGAAACCTGTTTTCGCTGTGTGTGGCGGGGGCGCGGGCACAGGGTCCGTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR GCA 90 bp GCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGGGGCAGGAGTGAGAAATaGTGGGGGAGGACGACCCTT +
Preference number: 4 (lower is better)
Translates to: APGPHGPPPPPHIRCGRRGRSEK*WGRTTL
Trigger: AAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCC...CCTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp TGTGGAAGAAGGGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGCCCAGGACCCCGCTGTaGGGCTCCAGGGTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: CGRRAGVRNAGGGRPFGLPRTPL*GSRVSS
Trigger: GCTAGAGACCCTGGAGCCGCACAGCGGGGTCCTGGG...CAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCCCTTCTTCCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430424.8
CDS-3UTR CCA 90 bp CAGGTACGGGTTGTTTCCTGTGGGCTGGAACTTGTAGCCCGTGAGCACGAAGAACCCGTCAGCGCCAGCTaGTGGATGCGCCCGGAGCAG +
Preference number: 4 (lower is better)
Translates to: QVRVVSCGLELVAREHEEPVSAS*WMRPEQ
Trigger: CTGCTCCGGGCGCATCCACCAGCTGGCGCTGACGGG...TTCTTCGTGCTCACGGGCTACAAGTTCCAGCCCACAGGAAACAACCCGTACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGGCCGAAGCTGTTCAGCTaGATGTCCGCTCGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: APGPHGPPPPPHIRCGRRPKLFS*MSARFS
Trigger: GGAGAAGCGAGCGGACATCCAGCTGAACAGCTTCGG...CCTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GTTCAGGCTGTACTGGCCTTCTTCCGCCTGAGAGCCGATCACCACGTGGAAACTCCTTGCGGGGGACTGTaGCCTGTGGCTTCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: VQAVLAFFRLRADHHVETPCGGL*PVASGA
Trigger: GGCTCCCGAAGCCACAGGCCACAGTCCCCCGCAAGG...AGTTTCCACGTGGTGATCGGCTCTCAGGCGGAAGAAGGCCAGTACAGCCTGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR CCA 90 bp GCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGGAGGCCTTCGATGGGGTaGCCCTGGCTGTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: APGPHGPPPPPHIRCGRRRPSMG*PWLLMK
Trigger: CTTCATCAACAGCCAGGGCCACCCCATCGAAGGCCT...CCTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp ACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCTGGCCAGGACCTGCATaGGGATCACGATCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: TLLPNGLVREPGSRGAGRWPGPA*GSRSQR
Trigger: TCTTTGGGATCGTGATCCCCATGCAGGTCCTGGCCA...GCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGGGAACAGCTTCAGCTTaGCCAGGTTCACTGCCACCT +
Preference number: 4 (lower is better)
Translates to: DSSSKWACPGTGVPGSWAGTASA*PGSLPP
Trigger: AGGTGGCAGTGAACCTGGCCAAGCTGAAGCTGTTCC...CGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGACGGGTTGTTTCCTGTaGGCTGGAACTTGTAGCCCG +
Preference number: 4 (lower is better)
Translates to: DSSSKWACPGTGVPGSWATGCFL*AGTCSP
Trigger: CGGGCTACAAGTTCCAGCCCACAGGAAACAACCCGT...CGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp ACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCTCCCCACATACGCTGTaGAAGAAGGGCAGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: TLLPNGLVREPGSRGAGRSPHTL*KKGRSE
Trigger: CTCACTCCTGCCCTTCTTCCACAGCGTATGTGGGGA...GCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp CAGGTACGGGTTGTTTCCTGTGGGCTGGAACTTGTAGCCCGTGAGCACGAAGAAGGGGAGCTGGGCGCCTaGTCCACATGGACCCCCTCC +
Preference number: 4 (lower is better)
Translates to: QVRVVSCGLELVAREHEEGELGA*STWTPS
Trigger: GGAGGGGGTCCATGTGGACCAGGCGCCCAGCTCCCC...TTCTTCGTGCTCACGGGCTACAAGTTCCAGCCCACAGGAAACAACCCGTACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp AGAAGGGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGAGATGTGGGGTCCCGGGGAGCTaGGCGCCTGGTCCACATGGA +
Preference number: 4 (lower is better)
Translates to: RRAGVRNAGGGRPFGLRCGVPGS*APGPHG
Trigger: TCCATGTGGACCAGGCGCCCAGCTCCCCGGGACCCC...ACATCTCAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCCCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp ACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCAGTTGTAGGAGTTGTTaGGGTGGCTCAGGCCCAACA +
Preference number: 4 (lower is better)
Translates to: TLLPNGLVREPGSRGAGRSCRSC*GGSGPT
Trigger: TGTTGGGCCTGAGCCACCTCAACAACTCCTACAACT...GCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp GGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGCCCGGATCATCACCGTaGTGTCGAATGGATGCTCCT +
Preference number: 4 (lower is better)
Translates to: GAWSTWTPSTSPHTLWKKPGSSP*CRMDAP
Trigger: AGGAGCATCCATTCGACATCACGGTGATGATCCGGG...CTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp AGGGACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGTGCGATGTAGTACATaGCGGCAAGGCCTTCGATGG +
Preference number: 4 (lower is better)
Translates to: RDSSSKWACPGTGVPGSWVRCST*RQGLRW
Trigger: CCATCGAAGGCCTTGCCGTCATGTACTACATCGCAC...CCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp GAGGAGGGCGCCCTTCAGCAGGTGTGCGATGTAGTACATGACGGCAAGGCCTTCGGAACTTGTAGCCCGTaGGCACGAAGAAGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: EEGALQQVCDVVHDGKAFGTCSP*ARRRPG
Trigger: CCCTGGCCTTCTTCGTGCTCACGGGCTACAAGTTCC...GAAGGCCTTGCCGTCATGTACTACATCGCACACCTGCTGAAGGGCGCCCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595908.5
CDS-3UTR TCA 90 bp GACACGGACCCTGTGCCCGCGCCCCCGCCACACACAGCGAAAACAGGTTTCTACCGCTGGCTGTTTTGTTaGCTTTGGAGAGGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: DTDPVPAPPPHTAKTGFYRWLFC*LWRGLP
Trigger: GGGAAGGCCTCTCCAAAGTCAACAAAACAGCCAGCG...GTAGAAACCTGTTTTCGCTGTGTGTGGCGGGGGCGCGGGCACAGGGTCCGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR GCA 90 bp TGTGGAAGAAGGGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGCAGGGACTTCTCTTCTaGCTCCCGGAGGCCCAGCCG +
Preference number: 4 (lower is better)
Translates to: CGRRAGVRNAGGGRPFGLQGLLF*LPEAQP
Trigger: CGGCTGGGCCTCCGGGAGGCAGAAGAGAAGTCCCTG...CAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCCCTTCTTCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp GCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGGCGCTGTACGTGTTCCTaGAGAGGATGGACACCCAGA +
Preference number: 4 (lower is better)
Translates to: APGPHGPPPPPHIRCGRRRCTCS*RGWTPR
Trigger: TCTGGGTGTCCATCCTCTGCAGGAACACGTACAGCG...CCTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000597706.5
CDS-3UTR GCA 90 bp TGGGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGACGCTGTACGTGTTCCTaGAGAGGATGGACACCCAGA +
Preference number: 4 (lower is better)
Translates to: WAPGPHGPPPPPHIRCGRRCTCS*RGWTPR
Trigger: TCTGGGTGTCCATCCTCTGCAGGAACACGTACAGCG...TCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000597706.5
CDS-3UTR GCA 90 bp GTACACATAGCTGGAAGGGAGGGGTGGTCCCGGGGTAAGGACAGGGCTGCCCAAGACGCATCCTGGAGATaGCGGATGGACCAGACTACG +
Preference number: 4 (lower is better)
Translates to: VHIAGREGWSRGKDRAAQDASWR*RMDQTT
Trigger: CGTAGTCTGGTCCATCCGGCATCTCCAGGATGCGTC...TTGGGCAGCCCTGTCCTTACCCCGGGACCACCCCTCCCTTCCAGCTATGTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264080.11
ENST00000594034.5
CDS-3UTR GCA 90 bp GTACACATAGCTGGAAGGGAGGGGTGGTCCCGGGGTAAGGACAGGGCTGCCCAATCCTCCTGGGGCAGCTaGAGGTACGGGTTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: VHIAGREGWSRGKDRAAQSSWGS*RYGLFP
Trigger: AGGAAACAACCCGTACCTGCAGCTGCCCCAGGAGGA...TTGGGCAGCCCTGTCCTTACCCCGGGACCACCCCTCCCTTCCAGCTATGTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264080.11
ENST00000594034.5
CDS-3UTR CCA 90 bp CTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCCCCTCCAGAGAGCCATTaGTGTAGAAACCGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: LFFQMGLSGNRGPGELGAPPESH*CRNRSC
Trigger: ACAGCTTCGGTTTCTACACCAATGGCTCTCTGGAGG...GGCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGAGATGTGGAGGTCGGGAGCCCTGGTTTaGAGGGTGCTTCCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GRSEKCWGRTTLWSEMWRSGALV*RVLPGG
Trigger: TCCTCCCGGAAGCACCCTCCAAACCAGGGCTCCCGA...CCTCCACATCTCAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp TTTATTGAATATACAAAGACACGGACCCTGTGCCCGCGCCCCCGCCACACACAGCCTTGCGGGGGACTGTaGCCTGTGGCTTCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: FIEYTKTRTLCPRPRHTQPCGGL*PVASGA
Trigger: GGCTCCCGAAGCCACAGGCCACAGTCCCCCGCAAGG...CTGTGTGTGGCGGGGGCGCGGGCACAGGGTCCGTGTCTTTGTATATTCAATAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR CCA 90 bp GACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGTGTTCCTGCAGAGGATaGACACCCAGAAGATGCCAG +
Preference number: 4 (lower is better)
Translates to: DSSSKWACPGTGVPGSWACSCRG*TPRRCQ
Trigger: CTGGCATCTTCTGGGTGTCCATCCTCTGCAGGAACA...CGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp ACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCTGTTCCTGCAGAGGATaGACACCCAGAAGATGCCAG +
Preference number: 4 (lower is better)
Translates to: TLLPNGLVREPGSRGAGRCSCRG*TPRRCQ
Trigger: CTGGCATCTTCTGGGTGTCCATCCTCTGCAGGAACA...GCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp AGGGACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCCGCCATGAGCCAGTaGATCTTGAAGACGCTGTAC +
Preference number: 4 (lower is better)
Translates to: RDSSSKWACPGTGVPGSWAAMSQ*ILKTLY
Trigger: GTACAGCGTCTTCAAGATCCACTGGCTCATGGCGGC...CCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000597706.5
CDS-3UTR CCA 90 bp GGGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAATGGCCAGGACCTGCATaGGGATCACGATCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: GRLVHMDPLHLPTYAVEEWPGPA*GSRSQR
Trigger: TCTTTGGGATCGTGATCCCCATGCAGGTCCTGGCCA...TTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp TGGGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAACGGGTTGTTTCCTGTaGGCTGGAACTTGTAGCCCG +
Preference number: 4 (lower is better)
Translates to: WAPGPHGPPPPPHIRCGRTGCFL*AGTCSP
Trigger: CGGGCTACAAGTTCCAGCCCACAGGAAACAACCCGT...TCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGACGGGTTGTTTCCTGTaGGCTGGAACTTGTAGCCCG +
Preference number: 4 (lower is better)
Translates to: GAWSTWTPSTSPHTLWKKTGCFL*AGTCSP
Trigger: CGGGCTACAAGTTCCAGCCCACAGGAAACAACCCGT...CTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp CCAGGACCTGCATGGGGATCACGATCCCAAAGACCTTCTTCTCCTTATCCGACAGGGGAGCTGGGCGCCTaGTCCACATGGACCCCCTCC +
Preference number: 4 (lower is better)
Translates to: PGPAWGSRSQRPSSPYPTGELGA*STWTPS
Trigger: GGAGGGGGTCCATGTGGACCAGGCGCCCAGCTCCCC...TGTCGGATAAGGAGAAGAAGGTCTTTGGGATCGTGATCCCCATGCAGGTCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GACCTGCATGGGGATCACGATCCCAAAGACCTTCTTCTCCTTATCCGACAGGACGGGGTCCCGGGGAGCTaGGCGCCTGGTCCACATGGA +
Preference number: 4 (lower is better)
Translates to: DLHGDHDPKDLLLLIRQDGVPGS*APGPHG
Trigger: TCCATGTGGACCAGGCGCCCAGCTCCCCGGGACCCC...GTCCTGTCGGATAAGGAGAAGAAGGTCTTTGGGATCGTGATCCCCATGCAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGGACTCTTCTTCCAAATaGGCTTGTCCGGGAACCGGG +
Preference number: 4 (lower is better)
Translates to: GAWSTWTPSTSPHTLWKKDSSSK*ACPGTG
Trigger: CCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGTC...CTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp AGGGACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGACTCTTCTTCCAAATaGGCTTGTCCGGGAACCGGG +
Preference number: 4 (lower is better)
Translates to: RDSSSKWACPGTGVPGSWDSSSK*ACPGTG
Trigger: CCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGTC...CCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGGGGCTGCCCAATATTTaGGGGGAGGAAGGGACTCTT +
Preference number: 4 (lower is better)
Translates to: GAWSTWTPSTSPHTLWKKGLPNI*GEEGTL
Trigger: AAGAGTCCCTTCCTCCCCCCAAATATTGGGCAGCCC...CTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp AAGGGGCATCTCCGCTGCCGACAGGAAGCCATCGGGGTTCTTCTCCCGGATCATAATCACTGCGGGTGTTaGCTTGGGCTTGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: KGHLRCRQEAIGVLLPDHNHCGC*LGLAGC
Trigger: GCAGCCAGCAAGCCCAAGTCAACACCCGCAGTGATT...ATGATCCGGGAGAAGAACCCCGATGGCTTCCTGTCGGCAGCGGAGATGCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR TCA 90 bp TGGGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGTTGTAGGAGTTGTTaGGGTGGCTCAGGCCCAACA +
Preference number: 4 (lower is better)
Translates to: WAPGPHGPPPPPHIRCGRSCRSC*GGSGPT
Trigger: TGTTGGGCCTGAGCCACCTCAACAACTCCTACAACT...TCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp TGTGGAAGAAGGGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGTGGCCTTCTTCCGCCTaGGAGCCGATCACCACGTGG +
Preference number: 4 (lower is better)
Translates to: CGRRAGVRNAGGGRPFGLWPSSA*EPITTW
Trigger: CCACGTGGTGATCGGCTCTCAGGCGGAAGAAGGCCA...CAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCCCTTCTTCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp GACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGATTACTTGCTCCATCTaGACATCCTCCTCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: DSSSKWACPGTGVPGSWAITCSI*TSSSSS
Trigger: GGAGGACGAGGAGGATGTTCAGATGGAGCAAGTAAT...CGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp GACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGGACGACCCTTTGGTCTaGGATGTGGAGGTGATCATA +
Preference number: 4 (lower is better)
Translates to: DSSSKWACPGTGVPGSWADDPLV*DVEVII
Trigger: TATGATCACCTCCACATCTCAGACCAAAGGGTCGTC...CGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp AGGTGCGTGTGGGCATCACACCAGGGAAACGCAGACGAAGGATCTGAGCGAGCCTACAGCCACTGCCACTaGAAGGGCACAGCCACCATG +
Preference number: 4 (lower is better)
Translates to: RCVWASHQGNADEGSERAYSHCH*KGTATM
Trigger: CATGGTGGCTGTGCCCTTTCAGTGGCAGTGGCTGTA...GGCTCGCTCAGATCCTTCGTCTGCGTTTCCCTGGTGTGATGCCCACACGCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595908.5
CDS-3UTR GCA 90 bp TTGGTCATTATTGTACACATAGCTGGAAGGGAGGGGTGGTCCCGGGGTAAGGACCCCTGGTTTGGAGGGTaGTTCCGGGAGGAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: LVIIVHIAGREGWSRGKDPWFGG*FREEPG
Trigger: CCCGGGCTCCTCCCGGAAGCACCCTCCAAACCAGGG...GTCCTTACCCCGGGACCACCCCTCCCTTCCAGCTATGTGTACAATAATGACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR GCA 90 bp GGACCCTGTGCCCGCGCCCCCGCCACACACAGCGAAAACAGGTTTCTACATTGTACGTTGGCCAGGACCTaGATGGGGATCACGATCCCA +
Preference number: 4 (lower is better)
Translates to: GPCARAPATHSENRFLHCTLART*MGITIP
Trigger: TGGGATCGTGATCCCCATGCAGGTCCTGGCCAACGT...ACAATGTAGAAACCTGTTTTCGCTGTGTGTGGCGGGGGCGCGGGCACAGGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR GCA 90 bp TCGTCCTCCTGGGGCAGCTGCAGGTACGGGTTGTTTCCTGTGGGCTGGAACTTGTCCTCCTGGGGCAGCTaGAGGTACGGGTTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: SSSWGSCRYGLFPVGWNLSSWGS*RYGLFP
Trigger: AGGAAACAACCCGTACCTGCAGCTGCCCCAGGAGGA...CAAGTTCCAGCCCACAGGAAACAACCCGTACCTGCAGCTGCCCCAGGAGGACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp ACTGAAGTTGTAGGAGTTGTTGAGGTGGCTCAGGCCCAACACCAGGTCCTTGTCGTCAGCGCCAGCTGGTaGATGCGCCCGGAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: TEVVGVVEVAQAQHQVLVVSASW*MRPEQP
Trigger: TGGCTGCTCCGGGCGCATCCACCAGCTGGCGCTGAC...GACAAGGACCTGGTGTTGGGCCTGAGCCACCTCAACAACTCCTACAACTTCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR CCA 90 bp GTTCAGGCTGTACTGGCCTTCTTCCGCCTGAGAGCCGATCACCACGTGGAAACTTCGGGAGCCCTGGTTTaGAGGGTGCTTCCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: VQAVLAFFRLRADHHVETSGALV*RVLPGG
Trigger: TCCTCCCGGAAGCACCCTCCAAACCAGGGCTCCCGA...AGTTTCCACGTGGTGATCGGCTCTCAGGCGGAAGAAGGCCAGTACAGCCTGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR CCA 90 bp AGTTCAGGCTGTACTGGCCTTCTTCCGCCTGAGAGCCGATCACCACGTGGAAACTCGGGAGCCCTGGTTTaGAGGGTGCTTCCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: SSGCTGLLPPESRSPRGNSGALV*RVLPGG
Trigger: TCCTCCCGGAAGCACCCTCCAAACCAGGGCTCCCGA...GTTTCCACGTGGTGATCGGCTCTCAGGCGGAAGAAGGCCAGTACAGCCTGAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR CCA 90 bp CGACAGGAAGCCATCGGGGTTCTTCTCCCGGATCATCACCGTGATGTCGAATGGTGGCTTCGGGAGCCCTaGTTTGGAGGGTGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: RQEAIGVLLPDHHRDVEWWLREP*FGGCFR
Trigger: CCGGAAGCACCCTCCAAACCAGGGCTCCCGAAGCCA...CCATTCGACATCACGGTGATGATCCGGGAGAAGAACCCCGATGGCTTCCTGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR CCA 90 bp GTTGTAGGAGTTGTTGAGGTGGCTCAGGCCCAACACCAGGTCCTTGTCCTTCCCTGGCTTCGGGAGCCCTaGTTTGGAGGGTGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: VVGVVEVAQAQHQVLVLPWLREP*FGGCFR
Trigger: CCGGAAGCACCCTCCAAACCAGGGCTCCCGAAGCCA...GGGAAGGACAAGGACCTGGTGTTGGGCCTGAGCCACCTCAACAACTCCTACAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR CCA 90 bp GAACCCAGAGTCCGTCATTACTTGCTCCATCTGAACATCCTCCTCGTCCTCCTGCCTTGCGGGGGACTGTaGCCTGTGGCTTCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: EPRVRHYLLHLNILLVLLPCGGL*PVASGA
Trigger: GGCTCCCGAAGCCACAGGCCACAGTCCCCCGCAAGG...CAGGAGGACGAGGAGGATGTTCAGATGGAGCAAGTAATGACGGACTCTGGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp AGGGACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGCACCGTGATGTCGAATaGATGCTCCTTTCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: RDSSSKWACPGTGVPGSWHRDVE*MLLSWH
Trigger: GTGCCAGGAAAGGAGCATCCATTCGACATCACGGTG...CCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp TGGGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGATGTTCCTGCAGAGGATaGACACCCAGAAGATGCCAG +
Preference number: 4 (lower is better)
Translates to: WAPGPHGPPPPPHIRCGRCSCRG*TPRRCQ
Trigger: CTGGCATCTTCTGGGTGTCCATCCTCTGCAGGAACA...TCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp TCGTCCTCCTGGGGCAGCTGCAGGTACGGGTTGTTTCCTGTGGGCTGGAACTTGAGGCCTTCGATGGGGTaGCCCTGGCTGTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: SSSWGSCRYGLFPVGWNLRPSMG*PWLLMK
Trigger: CTTCATCAACAGCCAGGGCCACCCCATCGAAGGCCT...CAAGTTCCAGCCCACAGGAAACAACCCGTACCTGCAGCTGCCCCAGGAGGACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp ACGAAGAAGGCCAGGGTGGAGCCCTCCACCAAGAGCTGGTACAGCCACTGCCACTGGCCAGGACCTGCATaGGGATCACGATCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: TKKARVEPSTKSWYSHCHWPGPA*GSRSQR
Trigger: TCTTTGGGATCGTGATCCCCATGCAGGTCCTGGCCA...GTGGCAGTGGCTGTACCAGCTCTTGGTGGAGGGCTCCACCCTGGCCTTCTTCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp TGTGGAAGAAGGGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGACAGCACGTAGTCGCTaGCGCCTTCCTCGCGGGACT +
Preference number: 4 (lower is better)
Translates to: CGRRAGVRNAGGGRPFGLTARSR*RLPRGT
Trigger: AGTCCCGCGAGGAAGGCGCCAGCGACTACGTGCTGT...CAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCCCTTCTTCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GTTCAGGCTGTACTGGCCTTCTTCCGCCTGAGAGCCGATCACCACGTGGAAACTACAGCACGTAGTCGCTaGCGCCTTCCTCGCGGGACT +
Preference number: 4 (lower is better)
Translates to: VQAVLAFFRLRADHHVETTARSR*RLPRGT
Trigger: AGTCCCGCGAGGAAGGCGCCAGCGACTACGTGCTGT...AGTTTCCACGTGGTGATCGGCTCTCAGGCGGAAGAAGGCCAGTACAGCCTGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595908.5
CDS-3UTR CCA 90 bp GGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGAGATGTGGAGGGTGCCAGACGCATCCTaGAGATGCCGGATGGACCAG +
Preference number: 4 (lower is better)
Translates to: GRSEKCWGRTTLWSEMWRVPDAS*RCRMDQ
Trigger: CTGGTCCATCCGGCATCTCCAGGATGCGTCTGGCAC...CCTCCACATCTCAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GTACACATAGCTGGAAGGGAGGGGTGGTCCCGGGGTAAGGACAGGGCTGCCCAAGGAACAGCTTCAGCTTaGCCAGGTTCACTGCCACCT +
Preference number: 4 (lower is better)
Translates to: VHIAGREGWSRGKDRAAQGTASA*PGSLPP
Trigger: AGGTGGCAGTGAACCTGGCCAAGCTGAAGCTGTTCC...TTGGGCAGCCCTGTCCTTACCCCGGGACCACCCCTCCCTTCCAGCTATGTGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264080.11
ENST00000594034.5
CDS-3UTR CCA 90 bp CCTCGTCCTCCTGGGGCAGCTGCAGGTACGGGTTGTTTCCTGTGGGCTGGAACTGGAACAGCTTCAGCTTaGCCAGGTTCACTGCCACCT +
Preference number: 4 (lower is better)
Translates to: PRPPGAAAGTGCFLWAGTGTASA*PGSLPP
Trigger: AGGTGGCAGTGAACCTGGCCAAGCTGAAGCTGTTCC...AGTTCCAGCCCACAGGAAACAACCCGTACCTGCAGCTGCCCCAGGAGGACGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGAGATGTGGAGGCGAAGAAGGCCAGGGTaGAGCCCTCCACCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: GRSEKCWGRTTLWSEMWRRRRPG*SPPPRA
Trigger: AGCTCTTGGTGGAGGGCTCCACCCTGGCCTTCTTCG...CCTCCACATCTCAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GTACACATAGCTGGAAGGGAGGGGTGGTCCCGGGGTAAGGACAGGGCTGCCCAAGGGCTGCCCAATATTTaGGGGGAGGAAGGGACTCTT +
Preference number: 4 (lower is better)
Translates to: VHIAGREGWSRGKDRAAQGLPNI*GEEGTL
Trigger: AAGAGTCCCTTCCTCCCCCCAAATATTGGGCAGCCC...TTGGGCAGCCCTGTCCTTACCCCGGGACCACCCCTCCCTTCCAGCTATGTGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264080.11
ENST00000594034.5
CDS-3UTR CCA 90 bp GGGCATCTCCGCTGCCGACAGGAAGCCATCGGGGTTCTTCTCCCGGATCATCACGGGCTGCCCAATATTTaGGGGGAGGAAGGGACTCTT +
Preference number: 4 (lower is better)
Translates to: GHLRCRQEAIGVLLPDHHGLPNI*GEEGTL
Trigger: AAGAGTCCCTTCCTCCCCCCAAATATTGGGCAGCCC...GTGATGATCCGGGAGAAGAACCCCGATGGCTTCCTGTCGGCAGCGGAGATGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595908.5
CDS-3UTR CCA 90 bp TGCAGTTGTGGAAGTTCAGGCTGTACTGGCCTTCTTCCGCCTGAGAGCCGATCAGCTGGAAGGGAGGGGTaGTCCCGGGGTAAGGACAGG +
Preference number: 4 (lower is better)
Translates to: CSCGSSGCTGLLPPESRSAGREG*SRGKDR
Trigger: CCTGTCCTTACCCCGGGACCACCCCTCCCTTCCAGC...TGATCGGCTCTCAGGCGGAAGAAGGCCAGTACAGCCTGAACTTCCACAACTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595908.5
CDS-3UTR CCA 90 bp GGGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAATATTGTACACATAGCTaGAAGGGAGGGGTGGTCCCG +
Preference number: 4 (lower is better)
Translates to: GRLVHMDPLHLPTYAVEEYCTHS*KGGVVP
Trigger: CGGGACCACCCCTCCCTTCCAGCTATGTGTACAATA...TTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264080.11
ENST00000594034.5
CDS-3UTR TCA 90 bp GACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCTCCTTTCCTGGCACTaGATTGTTGCAGTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: DSSSKWACPGTGVPGSWALLSWH*IVAVVE
Trigger: TTCCACAACTGCAACAATTCAGTGCCAGGAAAGGAG...CGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp GCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGGATTACTTGCTCCATCTaGACATCCTCCTCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: APGPHGPPPPPHIRCGRRITCSI*TSSSSS
Trigger: GGAGGACGAGGAGGATGTTCAGATGGAGCAAGTAAT...CCTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp GGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGGACGACCCTTTGGTCTaGGATGTGGAGGTGATCATA +
Preference number: 4 (lower is better)
Translates to: GAWSTWTPSTSPHTLWKKDDPLV*DVEVII
Trigger: TATGATCACCTCCACATCTCAGACCAAAGGGTCGTC...CTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp GACCTGCATGGGGATCACGATCCCAAAGACCTTCTTCTCCTTATCCGACAGGACCAGGGACTTCTCTTCTaGCTCCCGGAGGCCCAGCCG +
Preference number: 4 (lower is better)
Translates to: DLHGDHDPKDLLLLIRQDQGLLF*LPEAQP
Trigger: CGGCTGGGCCTCCGGGAGGCAGAAGAGAAGTCCCTG...GTCCTGTCGGATAAGGAGAAGAAGGTCTTTGGGATCGTGATCCCCATGCAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp CCTGGCACTGAATTGTTGCAGTTGTGGAAGTTCAGGCTGTACTGGCCTTCTTCCCCCTGGTTTGGAGGGTaGTTCCGGGAGGAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: PGTELLQLWKFRLYWPSSPWFGG*FREEPG
Trigger: CCCGGGCTCCTCCCGGAAGCACCCTCCAAACCAGGG...GGAAGAAGGCCAGTACAGCCTGAACTTCCACAACTGCAACAATTCAGTGCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR GCA 90 bp ACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCCTGGCACTGAATTGTTaGAGTTGTGGAAGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: TLLPNGLVREPGSRGAGRLALNC*SCGSSG
Trigger: GCCTGAACTTCCACAACTGCAACAATTCAGTGCCAG...GCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp TGCAGTTGTGGAAGTTCAGGCTGTACTGGCCTTCTTCCGCCTGAGAGCCGATCAAAGGGGCATCTCCGCTaGCGACAGGAAGCCATCGGG +
Preference number: 4 (lower is better)
Translates to: CSCGSSGCTGLLPPESRSKGHLR*RQEAIG
Trigger: CCCGATGGCTTCCTGTCGGCAGCGGAGATGCCCCTT...TGATCGGCTCTCAGGCGGAAGAAGGCCAGTACAGCCTGAACTTCCACAACTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR GCA 90 bp CCCTTTGGTCTGAGATGTGGAGGTGATCATAACAGTTCCCGCCCGCTGGCTGTTAAGGGGCATCTCCGCTaGCGACAGGAAGCCATCGGG +
Preference number: 4 (lower is better)
Translates to: PFGLRCGGDHNSSRPLAVKGHLR*RQEAIG
Trigger: CCCGATGGCTTCCTGTCGGCAGCGGAGATGCCCCTT...AACAGCCAGCGGGCGGGAACTGTTATGATCACCTCCACATCTCAGACCAAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp GGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGAGATGTGGAGGACGTTGGCCAGGACCTaGATGGGGATCACGATCCCA +
Preference number: 4 (lower is better)
Translates to: GRSEKCWGRTTLWSEMWRTLART*MGITIP
Trigger: TGGGATCGTGATCCCCATGCAGGTCCTGGCCAACGT...CCTCCACATCTCAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp GGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGAGATGTGGAGGCCACCTTCCCGTCTGTaGCAGACGCATCCTGGAGAT +
Preference number: 4 (lower is better)
Translates to: GRSEKCWGRTTLWSEMWRPPSRL*QTHPGD
Trigger: ATCTCCAGGATGCGTCTGGCACAGACGGGAAGGTGG...CCTCCACATCTCAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp GGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGAGATGTGGAGGAAGGGCACAGCCACCTaGAGCAGGATGGCGATGATG +
Preference number: 4 (lower is better)
Translates to: GRSEKCWGRTTLWSEMWRKGTAT*SRMAMM
Trigger: CATCATCGCCATCCTGCTGCAGGTGGCTGTGCCCTT...CCTCCACATCTCAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000597706.5
CDS-3UTR GCA 90 bp GGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGAGATGTGGAGGGGCAGGAGTGAGAAATaGTGGGGGAGGACGACCCTT +
Preference number: 4 (lower is better)
Translates to: GRSEKCWGRTTLWSEMWRGRSEK*WGRTTL
Trigger: AAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCC...CCTCCACATCTCAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp ATCAGCCCAGGTGCGTGTGGGCATCACACCAGGGAAACGCAGACGAAGGATCTGGGCAGGAGTGAGAAATaGTGGGGGAGGACGACCCTT +
Preference number: 4 (lower is better)
Translates to: ISPGACGHHTRETQTKDLGRSEK*WGRTTL
Trigger: AAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCC...CAGATCCTTCGTCTGCGTTTCCCTGGTGTGATGCCCACACGCACCTGGGCTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595908.5
CDS-3UTR GCA 90 bp GGGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAACCAAATCCCATTAAGTaGCCAGAGGACCCCACTCTA +
Preference number: 4 (lower is better)
Translates to: GRLVHMDPLHLPTYAVEEPNPIK*PEDPTL
Trigger: TAGAGTGGGGTCCTCTGGGCACTTAATGGGATTTGG...TTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430424.8
CDS-3UTR GCA 90 bp AGAAGGGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGAGATGTTTCTCCCCCTCGGCGTaGCTGACCTTCACCTTCCCG +
Preference number: 4 (lower is better)
Translates to: RRAGVRNAGGGRPFGLRCFSPSA*LTFTFP
Trigger: CGGGAAGGTGAAGGTCAGGCACGCCGAGGGGGAGAA...ACATCTCAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCCCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000430424.8
CDS-3UTR CCA 90 bp CCTTTCCTGGCACTGAATTGTTGCAGTTGTGGAAGTTCAGGCTGTACTGGCCTTCCCGTCAGCGCCAGCTaGTGGATGCGCCCGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PFLALNCCSCGSSGCTGLPVSAS*WMRPEQ
Trigger: CTGCTCCGGGCGCATCCACCAGCTGGCGCTGACGGG...AAGGCCAGTACAGCCTGAACTTCCACAACTGCAACAATTCAGTGCCAGGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR CCA 90 bp TTGTTGAGGTGGCTCAGGCCCAACACCAGGTCCTTGTCCTTCCCACTAGGACCCCCGAAGCTGTTCAGCTaGATGTCCGCTCGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LLRWLRPNTRSLSFPLGPPKLFS*MSARFS
Trigger: GGAGAAGCGAGCGGACATCCAGCTGAACAGCTTCGG...GGGTCCTAGTGGGAAGGACAAGGACCTGGTGTTGGGCCTGAGCCACCTCAACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595908.5
CDS-3UTR CCA 90 bp TGGGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGACCTCCAGAGAGCCATTaGTGTAGAAACCGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: WAPGPHGPPPPPHIRCGRPPESH*CRNRSC
Trigger: ACAGCTTCGGTTTCTACACCAATGGCTCTCTGGAGG...TCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCTGCTACTGTTTTTCTaGAGAGGGCAGTCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: DSSSKWACPGTGVPGSWALLLFF*RGQSWK
Trigger: TTTCCAGGACTGCCCTCTCCAGAAAAACAGTAGCAG...CGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp AGAAGGGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGAGATGTTGGCTTCGGGAGCCCTaGTTTGGAGGGTGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: RRAGVRNAGGGRPFGLRCWLREP*FGGCFR
Trigger: CCGGAAGCACCCTCCAAACCAGGGCTCCCGAAGCCA...ACATCTCAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCCCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp AGAAGGGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGAGATGTGGGGACTGTGGCCTGTaGCTTCGGGAGCCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: RRAGVRNAGGGRPFGLRCGDCGL*LREPWF
Trigger: AAACCAGGGCTCCCGAAGCCACAGGCCACAGTCCCC...ACATCTCAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCCCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp AAGACACGGACCCTGTGCCCGCGCCCCCGCCACACACAGCGAAAACAGGTTTCTCACCGTGATGTCGAATaGATGCTCCTTTCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: KTRTLCPRPRHTQRKQVSHRDVE*MLLSWH
Trigger: GTGCCAGGAAAGGAGCATCCATTCGACATCACGGTG...AGAAACCTGTTTTCGCTGTGTGTGGCGGGGGCGCGGGCACAGGGTCCGTGTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR CCA 90 bp ACGAAGAAGGCCAGGGTGGAGCCCTCCACCAAGAGCTGGTACAGCCACTGCCACCACCGTGATGTCGAATaGATGCTCCTTTCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: TKKARVEPSTKSWYSHCHHRDVE*MLLSWH
Trigger: GTGCCAGGAAAGGAGCATCCATTCGACATCACGGTG...GTGGCAGTGGCTGTACCAGCTCTTGGTGGAGGGCTCCACCCTGGCCTTCTTCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGAGATGTGGAGGAGGCCTTCGATGGGGTaGCCCTGGCTGTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: GRSEKCWGRTTLWSEMWRRPSMG*PWLLMK
Trigger: CTTCATCAACAGCCAGGGCCACCCCATCGAAGGCCT...CCTCCACATCTCAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp CCACGTTGGCCAGGACCTGCATGGGGATCACGATCCCAAAGACCTTCTTCTCCTCGAAGAAGGCCAGGGTaGAGCCCTCCACCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: PRWPGPAWGSRSQRPSSPRRRPG*SPPPRA
Trigger: AGCTCTTGGTGGAGGGCTCCACCCTGGCCTTCTTCG...AGGAGAAGAAGGTCTTTGGGATCGTGATCCCCATGCAGGTCCTGGCCAACGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp CTGGGGCAGCTGCAGGTACGGGTTGTTTCCTGTGGGCTGGAACTTGTAGCCCGTAGGAGTGAGAAATGCTaGGGGAGGACGACCCTTTGG +
Preference number: 4 (lower is better)
Translates to: LGQLQVRVVSCGLELVARRSEKC*GRTTLW
Trigger: CCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCT...ACGGGCTACAAGTTCCAGCCCACAGGAAACAACCCGTACCTGCAGCTGCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GGACCCTGTGCCCGCGCCCCCGCCACACACAGCGAAAACAGGTTTCTACATTGTTCCCCACATACGCTGTaGAAGAAGGGCAGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: GPCARAPATHSENRFLHCSPHTL*KKGRSE
Trigger: CTCACTCCTGCCCTTCTTCCACAGCGTATGTGGGGA...ACAATGTAGAAACCTGTTTTCGCTGTGTGTGGCGGGGGCGCGGGCACAGGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR TCA 90 bp GAGGTCCACCAGGAACAAAATCTCCTTCCACAGCACGTAGTCGCTGGCGCCTTCAATCACTGCGGGTGTTaGCTTGGGCTTGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: EVHQEQNLLPQHVVAGAFNHCGC*LGLAGC
Trigger: GCAGCCAGCAAGCCCAAGTCAACACCCGCAGTGATT...GAAGGCGCCAGCGACTACGTGCTGTGGAAGGAGATTTTGTTCCTGGTGGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp TCGTCCTCCTGGGGCAGCTGCAGGTACGGGTTGTTTCCTGTGGGCTGGAACTTGAGTTGTAGGAGTTGTTaGGGTGGCTCAGGCCCAACA +
Preference number: 4 (lower is better)
Translates to: SSSWGSCRYGLFPVGWNLSCRSC*GGSGPT
Trigger: TGTTGGGCCTGAGCCACCTCAACAACTCCTACAACT...CAAGTTCCAGCCCACAGGAAACAACCCGTACCTGCAGCTGCCCCAGGAGGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp GAACCCAGAGTCCGTCATTACTTGCTCCATCTGAACATCCTCCTCGTCCTCCTGTGGCCTTCTTCCGCCTaGGAGCCGATCACCACGTGG +
Preference number: 4 (lower is better)
Translates to: EPRVRHYLLHLNILLVLLWPSSA*EPITTW
Trigger: CCACGTGGTGATCGGCTCTCAGGCGGAAGAAGGCCA...CAGGAGGACGAGGAGGATGTTCAGATGGAGCAAGTAATGACGGACTCTGGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp GTACTGGCCTTCTTCCGCCTGAGAGCCGATCACCACGTGGAAACTGAAGTTGTATGGCCTTCTTCCGCCTaGGAGCCGATCACCACGTGG +
Preference number: 4 (lower is better)
Translates to: VLAFFRLRADHHVETEVVWPSSA*EPITTW
Trigger: CCACGTGGTGATCGGCTCTCAGGCGGAAGAAGGCCA...TACAACTTCAGTTTCCACGTGGTGATCGGCTCTCAGGCGGAAGAAGGCCAGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR TCA 90 bp GGGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAACTCCTTTCCTGGCACTaGATTGTTGCAGTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: GRLVHMDPLHLPTYAVEELLSWH*IVAVVE
Trigger: TTCCACAACTGCAACAATTCAGTGCCAGGAAAGGAG...TTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp AGAAGGGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGAGATGTGGAACTTGTAGCCCGTaGGCACGAAGAAGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RRAGVRNAGGGRPFGLRCGTCSP*ARRRPG
Trigger: CCCTGGCCTTCTTCGTGCTCACGGGCTACAAGTTCC...ACATCTCAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCCCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp AAGACACGGACCCTGTGCCCGCGCCCCCGCCACACACAGCGAAAACAGGTTTCTATTACTTGCTCCATCTaGACATCCTCCTCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: KTRTLCPRPRHTQRKQVSITCSI*TSSSSS
Trigger: GGAGGACGAGGAGGATGTTCAGATGGAGCAAGTAAT...AGAAACCTGTTTTCGCTGTGTGTGGCGGGGGCGCGGGCACAGGGTCCGTGTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR TCA 90 bp GGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGAGATGTGGAGGCGCTGGCTGTTTTGTTaGCTTTGGAGAGGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: GRSEKCWGRTTLWSEMWRRWLFC*LWRGLP
Trigger: GGGAAGGCCTCTCCAAAGTCAACAAAACAGCCAGCG...CCTCCACATCTCAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp CATCTCCGCTGCCGACAGGAAGCCATCGGGGTTCTTCTCCCGGATCATCACCGTAGGGCACAGCCACCATaGCATAGTAATGCCGGAACA +
Preference number: 4 (lower is better)
Translates to: HLRCRQEAIGVLLPDHHRRAQPP*HSNAGT
Trigger: TGTTCCGGCATTACTATGTCATGGTGGCTGTGCCCT...ACGGTGATGATCCGGGAGAAGAACCCCGATGGCTTCCTGTCGGCAGCGGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595908.5
CDS-3UTR GCA 90 bp ACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCATAAACAACGTCTTCTaGTCTCCATACTTCCGCACC +
Preference number: 4 (lower is better)
Translates to: TLLPNGLVREPGSRGAGRINNVF*SPYFRT
Trigger: GGTGCGGAAGTATGGAGAGCAGAAGACGTTGTTTAT...GCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp GGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGGTGATGTCGAATGGATaGTCCTTTCCTGGCACTGAA +
Preference number: 4 (lower is better)
Translates to: GAWSTWTPSTSPHTLWKKVMSNG*SFPGTE
Trigger: TTCAGTGCCAGGAAAGGAGCATCCATTCGACATCAC...CTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp CCCTTTGGTCTGAGATGTGGAGGTGATCATAACAGTTCCCGCCCGCTGGCTGTTTGGACACCCAGAAGATaGCAGCGGCCAGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: PFGLRCGGDHNSSRPLAVWTPRR*QRPGSR
Trigger: CCTGCTTCCTGGCCGCTGGCATCTTCTGGGTGTCCA...AACAGCCAGCGGGCGGGAACTGTTATGATCACCTCCACATCTCAGACCAAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp GGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGAGATGTGGAGGCGCTGTACGTGTTCCTaGAGAGGATGGACACCCAGA +
Preference number: 4 (lower is better)
Translates to: GRSEKCWGRTTLWSEMWRRCTCS*RGWTPR
Trigger: TCTGGGTGTCCATCCTCTGCAGGAACACGTACAGCG...CCTCCACATCTCAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000597706.5
CDS-3UTR GCA 90 bp GGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGAGATGTGGAGGGCCCTTCAGCAGGTGTaGGATGTAGTACATGACGGC +
Preference number: 4 (lower is better)
Translates to: GRSEKCWGRTTLWSEMWRALQQV*DVVHDG
Trigger: GCCGTCATGTACTACATCGCACACCTGCTGAAGGGC...CCTCCACATCTCAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
CDS-3UTR GCA 90 bp CAGGAAGCAGGCGGACATGACCATGTAGAGCTTGAAAAGGGGCATCTCCGCTGCACGTTGGCCAGGACCTaGATGGGGATCACGATCCCA +
Preference number: 4 (lower is better)
Translates to: QEAGGHDHVELEKGHLRCTLART*MGITIP
Trigger: TGGGATCGTGATCCCCATGCAGGTCCTGGCCAACGT...GCAGCGGAGATGCCCCTTTTCAAGCTCTACATGGTCATGTCCGCCTGCTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000595908.5
CDS-3UTR GCA 90 bp TGTGGAAGAAGGGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGGACGCATCCTGGAGATaGCGGATGGACCAGACTACG +
Preference number: 4 (lower is better)
Translates to: CGRRAGVRNAGGGRPFGLDASWR*RMDQTT
Trigger: CGTAGTCTGGTCCATCCGGCATCTCCAGGATGCGTC...CAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCCCTTCTTCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp CCACGTTGGCCAGGACCTGCATGGGGATCACGATCCCAAAGACCTTCTTCTCCTCCACCTTCCCGTCTGTaGCAGACGCATCCTGGAGAT +
Preference number: 4 (lower is better)
Translates to: PRWPGPAWGSRSQRPSSPPPSRL*QTHPGD
Trigger: ATCTCCAGGATGCGTCTGGCACAGACGGGAAGGTGG...AGGAGAAGAAGGTCTTTGGGATCGTGATCCCCATGCAGGTCCTGGCCAACGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp GTCATTATTGTACACATAGCTGGAAGGGAGGGGTGGTCCCGGGGTAAGGACAGGCTTGGCCAGGTTCACTaGCACCTTCCCGTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: VIIVHIAGREGWSRGKDRLGQVH*HLPVCA
Trigger: GGCACAGACGGGAAGGTGGCAGTGAACCTGGCCAAG...CCTGTCCTTACCCCGGGACCACCCCTCCCTTCCAGCTATGTGTACAATAATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264080.11
ENST00000594034.5
CDS-3UTR GCA 90 bp TGTTGCAGTTGTGGAAGTTCAGGCTGTACTGGCCTTCTTCCGCCTGAGAGCCGACCTGATCAGCCCAGGTaGGTGTGGGCATCACACCAG +
Preference number: 4 (lower is better)
Translates to: CCSCGSSGCTGLLPPESRPDQPR*VWASHQ
Trigger: CTGGTGTGATGCCCACACGCACCTGGGCTGATCAGG...TCGGCTCTCAGGCGGAAGAAGGCCAGTACAGCCTGAACTTCCACAACTGCAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595908.5
CDS-3UTR CCA 90 bp ACGATCCCAAAGACCTTCTTCTCCTTATCCGACAGGACGTACTTGATGAAGGCCGTCAGCGCCAGCTGGTaGATGCGCCCGGAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: TIPKTFFSLSDRTYLMKAVSASW*MRPEQP
Trigger: TGGCTGCTCCGGGCGCATCCACCAGCTGGCGCTGAC...GGCCTTCATCAAGTACGTCCTGTCGGATAAGGAGAAGAAGGTCTTTGGGATCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GGGCATCTCCGCTGCCGACAGGAAGCCATCGGGGTTCTTCTCCCGGATCATCACCCTCCAGAGAGCCATTaGTGTAGAAACCGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: GHLRCRQEAIGVLLPDHHPPESH*CRNRSC
Trigger: ACAGCTTCGGTTTCTACACCAATGGCTCTCTGGAGG...GTGATGATCCGGGAGAAGAACCCCGATGGCTTCCTGTCGGCAGCGGAGATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR CCA 90 bp GACCTGCATGGGGATCACGATCCCAAAGACCTTCTTCTCCTTATCCGACAGGACGGGGACTGTGGCCTGTaGCTTCGGGAGCCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: DLHGDHDPKDLLLLIRQDGDCGL*LREPWF
Trigger: AAACCAGGGCTCCCGAAGCCACAGGCCACAGTCCCC...GTCCTGTCGGATAAGGAGAAGAAGGTCTTTGGGATCGTGATCCCCATGCAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGGAATTGTTGCAGTTGTaGAAGTTCAGGCTGTACTGG +
Preference number: 4 (lower is better)
Translates to: DSSSKWACPGTGVPGSWAELLQL*KFRLYW
Trigger: CCAGTACAGCCTGAACTTCCACAACTGCAACAATTC...CGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp CATCTCCGCTGCCGACAGGAAGCCATCGGGGTTCTTCTCCCGGATCATCACCGTCACCGTGATGTCGAATaGATGCTCCTTTCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: HLRCRQEAIGVLLPDHHRHRDVE*MLLSWH
Trigger: GTGCCAGGAAAGGAGCATCCATTCGACATCACGGTG...ACGGTGATGATCCGGGAGAAGAACCCCGATGGCTTCCTGTCGGCAGCGGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR CCA 90 bp GGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGAGATGTGGAGGTCCCCACATACGCTGTaGAAGAAGGGCAGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: GRSEKCWGRTTLWSEMWRSPHTL*KKGRSE
Trigger: CTCACTCCTGCCCTTCTTCCACAGCGTATGTGGGGA...CCTCCACATCTCAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGAGATGTGGAGGGACTCTTCTTCCAAATaGGCTTGTCCGGGAACCGGG +
Preference number: 4 (lower is better)
Translates to: GRSEKCWGRTTLWSEMWRDSSSK*ACPGTG
Trigger: CCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGTC...CCTCCACATCTCAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp GCTGTACTGGCCTTCTTCCGCCTGAGAGCCGATCACCACGTGGAAACTGAAGTTAATCACTGCGGGTGTTaGCTTGGGCTTGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: AVLAFFRLRADHHVETEVNHCGC*LGLAGC
Trigger: GCAGCCAGCAAGCCCAAGTCAACACCCGCAGTGATT...AACTTCAGTTTCCACGTGGTGATCGGCTCTCAGGCGGAAGAAGGCCAGTACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR TCA 90 bp GGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGAGATGTGGAGGAGTTGTAGGAGTTGTTaGGGTGGCTCAGGCCCAACA +
Preference number: 4 (lower is better)
Translates to: GRSEKCWGRTTLWSEMWRSCRSC*GGSGPT
Trigger: TGTTGGGCCTGAGCCACCTCAACAACTCCTACAACT...CCTCCACATCTCAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp CTGCAGGTACGGGTTGTTTCCTGTGGGCTGGAACTTGTAGCCCGTGAGCACGAACCCGGATCATCACCGTaGTGTCGAATGGATGCTCCT +
Preference number: 4 (lower is better)
Translates to: LQVRVVSCGLELVAREHEPGSSP*CRMDAP
Trigger: AGGAGCATCCATTCGACATCACGGTGATGATCCGGG...TTCGTGCTCACGGGCTACAAGTTCCAGCCCACAGGAAACAACCCGTACCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp AGTTCAGGCTGTACTGGCCTTCTTCCGCCTGAGAGCCGATCACCACGTGGAAACCCCGGATCATCACCGTaGTGTCGAATGGATGCTCCT +
Preference number: 4 (lower is better)
Translates to: SSGCTGLLPPESRSPRGNPGSSP*CRMDAP
Trigger: AGGAGCATCCATTCGACATCACGGTGATGATCCGGG...GTTTCCACGTGGTGATCGGCTCTCAGGCGGAAGAAGGCCAGTACAGCCTGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR TCA 90 bp TGTGGAAGAAGGGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGCGCTGGCTGTTTTGTTaGCTTTGGAGAGGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: CGRRAGVRNAGGGRPFGLRWLFC*LWRGLP
Trigger: GGGAAGGCCTCTCCAAAGTCAACAAAACAGCCAGCG...CAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCCCTTCTTCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp GGGGATCACGATCCCAAAGACCTTCTTCTCCTTATCCGACAGGACGTACTTGATTCCGCACCTGGACCCTaGTCAGCCCAGGTGCGTGTG +
Preference number: 4 (lower is better)
Translates to: GDHDPKDLLLLIRQDVLDSAPGP*SAQVRV
Trigger: CACACGCACCTGGGCTGATCAGGGTCCAGGTGCGGA...ATCAAGTACGTCCTGTCGGATAAGGAGAAGAAGGTCTTTGGGATCGTGATCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595908.5
CDS-3UTR GCA 90 bp AGGGACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGATAAACAACGTCTTCTaGTCTCCATACTTCCGCACC +
Preference number: 4 (lower is better)
Translates to: RDSSSKWACPGTGVPGSWINNVF*SPYFRT
Trigger: GGTGCGGAAGTATGGAGAGCAGAAGACGTTGTTTAT...CCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp TGGGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAATAAACAACGTCTTCTaGTCTCCATACTTCCGCACC +
Preference number: 4 (lower is better)
Translates to: WAPGPHGPPPPPHIRCGRINNVF*SPYFRT
Trigger: GGTGCGGAAGTATGGAGAGCAGAAGACGTTGTTTAT...TCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp GGGCATCTCCGCTGCCGACAGGAAGCCATCGGGGTTCTTCTCCCGGATCATCACCTGGCACTGAATTGTTaGAGTTGTGGAAGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: GHLRCRQEAIGVLLPDHHLALNC*SCGSSG
Trigger: GCCTGAACTTCCACAACTGCAACAATTCAGTGCCAG...GTGATGATCCGGGAGAAGAACCCCGATGGCTTCCTGTCGGCAGCGGAGATGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR GCA 90 bp GCACTGAATTGTTGCAGTTGTGGAAGTTCAGGCTGTACTGGCCTTCTTCCGCCTAAGGGGCATCTCCGCTaGCGACAGGAAGCCATCGGG +
Preference number: 4 (lower is better)
Translates to: ALNCCSCGSSGCTGLLPPKGHLR*RQEAIG
Trigger: CCCGATGGCTTCCTGTCGGCAGCGGAGATGCCCCTT...AGGCGGAAGAAGGCCAGTACAGCCTGAACTTCCACAACTGCAACAATTCAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR GCA 90 bp AGAAGGGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGAGATGTGACGCATCCTGGAGATaGCGGATGGACCAGACTACG +
Preference number: 4 (lower is better)
Translates to: RRAGVRNAGGGRPFGLRCDASWR*RMDQTT
Trigger: CGTAGTCTGGTCCATCCGGCATCTCCAGGATGCGTC...ACATCTCAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCCCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp AGAAGGGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGAGATGTCCACCTTCCCGTCTGTaGCAGACGCATCCTGGAGAT +
Preference number: 4 (lower is better)
Translates to: RRAGVRNAGGGRPFGLRCPPSRL*QTHPGD
Trigger: ATCTCCAGGATGCGTCTGGCACAGACGGGAAGGTGG...ACATCTCAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCCCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp ACTGAAGTTGTAGGAGTTGTTGAGGTGGCTCAGGCCCAACACCAGGTCCTTGTCCTTGGCCAGGTTCACTaGCACCTTCCCGTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: TEVVGVVEVAQAQHQVLVLGQVH*HLPVCA
Trigger: GGCACAGACGGGAAGGTGGCAGTGAACCTGGCCAAG...GACAAGGACCTGGTGTTGGGCCTGAGCCACCTCAACAACTCCTACAACTTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595908.5
CDS-3UTR GCA 90 bp AGAAGGGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGAGATGTAAGGGCACAGCCACCTaGAGCAGGATGGCGATGATG +
Preference number: 4 (lower is better)
Translates to: RRAGVRNAGGGRPFGLRCKGTAT*SRMAMM
Trigger: CATCATCGCCATCCTGCTGCAGGTGGCTGTGCCCTT...ACATCTCAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCCCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000597706.5
CDS-3UTR GCA 90 bp GTCATTATTGTACACATAGCTGGAAGGGAGGGGTGGTCCCGGGGTAAGGACAGGTCCTCCTGGGGCAGCTaGAGGTACGGGTTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: VIIVHIAGREGWSRGKDRSSWGS*RYGLFP
Trigger: AGGAAACAACCCGTACCTGCAGCTGCCCCAGGAGGA...CCTGTCCTTACCCCGGGACCACCCCTCCCTTCCAGCTATGTGTACAATAATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264080.11
ENST00000594034.5
CDS-3UTR GCA 90 bp AGAAGGGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGAGATGTGGCAGGAGTGAGAAATaGTGGGGGAGGACGACCCTT +
Preference number: 4 (lower is better)
Translates to: RRAGVRNAGGGRPFGLRCGRSEK*WGRTTL
Trigger: AAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCC...ACATCTCAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCCCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp CTGGGGCAGCTGCAGGTACGGGTTGTTTCCTGTGGGCTGGAACTTGTAGCCCGTTTCAGCTCACAGGTGTaGGATGTAGTACATGACGGC +
Preference number: 4 (lower is better)
Translates to: LGQLQVRVVSCGLELVARFSSQV*DVVHDG
Trigger: GCCGTCATGTACTACATCGCACACCTGTGAGCTGAA...ACGGGCTACAAGTTCCAGCCCACAGGAAACAACCCGTACCTGCAGCTGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597706.5
CDS-3UTR CCA 90 bp GCCCCCGCCACACACAGCGAAAACAGGTTTCTACATTGTAAACACAACCTCCGTTGGCTTCGGGAGCCCTaGTTTGGAGGGTGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: APATHSENRFLHCKHNLRWLREP*FGGCFR
Trigger: CCGGAAGCACCCTCCAAACCAGGGCTCCCGAAGCCA...ACGGAGGTTGTGTTTACAATGTAGAAACCTGTTTTCGCTGTGTGTGGCGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR CCA 90 bp TTGGTCATTATTGTACACATAGCTGGAAGGGAGGGGTGGTCCCGGGGTAAGGACTTGACTTGGGCTTGCTaGCTGCAGAGGTCCCTCCGC +
Preference number: 4 (lower is better)
Translates to: LVIIVHIAGREGWSRGKDLTWAC*LQRSLR
Trigger: GCGGAGGGACCTCTGCAGCCAGCAAGCCCAAGTCAA...GTCCTTACCCCGGGACCACCCCTCCCTTCCAGCTATGTGTACAATAATGACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR CCA 90 bp GCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGGGAATTGTTGCAGTTGTaGAAGTTCAGGCTGTACTGG +
Preference number: 4 (lower is better)
Translates to: APGPHGPPPPPHIRCGRRELLQL*KFRLYW
Trigger: CCAGTACAGCCTGAACTTCCACAACTGCAACAATTC...CCTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GAGGTCCACCAGGAACAAAATCTCCTTCCACAGCACGTAGTCGCTGGCGCCTTCGCCGCCATGAGCCAGTaGATCTTGAAGACGCTGTAC +
Preference number: 4 (lower is better)
Translates to: EVHQEQNLLPQHVVAGAFAAMSQ*ILKTLY
Trigger: GTACAGCGTCTTCAAGATCCACTGGCTCATGGCGGC...GAAGGCGCCAGCGACTACGTGCTGTGGAAGGAGATTTTGTTCCTGGTGGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597706.5
CDS-3UTR CCA 90 bp GTTCTTCTCCCGGATCATCACCGTGATGTCGAATGGATGCTCCTTTCCTGGCACGTGCCAGACGCATCCTaGAGATGCCGGATGGACCAG +
Preference number: 4 (lower is better)
Translates to: VLLPDHHRDVEWMLLSWHVPDAS*RCRMDQ
Trigger: CTGGTCCATCCGGCATCTCCAGGATGCGTCTGGCAC...GTGCCAGGAAAGGAGCATCCATTCGACATCACGGTGATGATCCGGGAGAAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595908.5
CDS-3UTR CCA 90 bp TGTGGAAGAAGGGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGGGAACAGCTTCAGCTTaGCCAGGTTCACTGCCACCT +
Preference number: 4 (lower is better)
Translates to: CGRRAGVRNAGGGRPFGLGTASA*PGSLPP
Trigger: AGGTGGCAGTGAACCTGGCCAAGCTGAAGCTGTTCC...CAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCCCTTCTTCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GAGGTCCACCAGGAACAAAATCTCCTTCCACAGCACGTAGTCGCTGGCGCCTTCGACTCTTCTTCCAAATaGGCTTGTCCGGGAACCGGG +
Preference number: 4 (lower is better)
Translates to: EVHQEQNLLPQHVVAGAFDSSSK*ACPGTG
Trigger: CCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGTC...GAAGGCGCCAGCGACTACGTGCTGTGGAAGGAGATTTTGTTCCTGGTGGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp CCAGGACCTGCATGGGGATCACGATCCCAAAGACCTTCTTCTCCTTATCCGACACAGCCCAGGTGCGTGTaGGCATCACACCAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: PGPAWGSRSQRPSSPYPTQPRCV*ASHQGN
Trigger: GTTTCCCTGGTGTGATGCCCACACGCACCTGGGCTG...TGTCGGATAAGGAGAAGAAGGTCTTTGGGATCGTGATCCCCATGCAGGTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595908.5
3UTR CAA 72 bp GGAGGTGATCATAACAGTTCCCGCCCGCTGGCTGTTTaGTTGACTTTGGAGAGGCCTTCCCGGAACCCAGAG +
Preference number: 4 (lower is better)
Translates to: GGDHNSSRPLAV*LTLERPSRNPE
Trigger: CTCTGGGTTCCGGGAAGGCCTCTCCAAAGTCAACAAAACAGCCAGCGGGCGGGAACTGTTATGATCACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp GCGCCCCCGCCACACACAGCGAAAACAGGTTTCTACATTGTAAACACAACCTCCAATCACTGCGGGTGTTaGCTTGGGCTTGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: APPPHTAKTGFYIVNTTSNHCGC*LGLAGC
Trigger: GCAGCCAGCAAGCCCAAGTCAACACCCGCAGTGATT...GGAGGTTGTGTTTACAATGTAGAAACCTGTTTTCGCTGTGTGTGGCGGGGGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR TCA 90 bp TTTATTGAATATACAAAGACACGGACCCTGTGCCCGCGCCCCCGCCACACACAGCCCGGATCATCACCGTaGTGTCGAATGGATGCTCCT +
Preference number: 4 (lower is better)
Translates to: FIEYTKTRTLCPRPRHTQPGSSP*CRMDAP
Trigger: AGGAGCATCCATTCGACATCACGGTGATGATCCGGG...CTGTGTGTGGCGGGGGCGCGGGCACAGGGTCCGTGTCTTTGTATATTCAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR TCA 90 bp AGAAGGGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGAGATGTCCCGGATCATCACCGTaGTGTCGAATGGATGCTCCT +
Preference number: 4 (lower is better)
Translates to: RRAGVRNAGGGRPFGLRCPGSSP*CRMDAP
Trigger: AGGAGCATCCATTCGACATCACGGTGATGATCCGGG...ACATCTCAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCCCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp TGTGGAAGAAGGGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGTGGCACCACAGCAGATaGGGTCCACCAGGAACAAAA +
Preference number: 4 (lower is better)
Translates to: CGRRAGVRNAGGGRPFGLWHHSR*GPPGTK
Trigger: TTTTGTTCCTGGTGGACCTCATCTGCTGTGGTGCCA...CAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCCCTTCTTCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp GACAGGACGTACTTGATGAAGGCCCAGCCTGAGCCAATCAGGGCGATGGTGATGTGGCACCACAGCAGATaGGGTCCACCAGGAACAAAA +
Preference number: 4 (lower is better)
Translates to: DRTYLMKAQPEPIRAMVMWHHSR*GPPGTK
Trigger: TTTTGTTCCTGGTGGACCTCATCTGCTGTGGTGCCA...CATCACCATCGCCCTGATTGGCTCAGGCTGGGCCTTCATCAAGTACGTCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp GATGACCATGACATAGTAATGCCGGAACAGCTTCAGCTTGGCCAGGTTCACTGCGGAACTTGTAGCCCGTaGGCACGAAGAAGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: DDHDIVMPEQLQLGQVHCGTCSP*ARRRPG
Trigger: CCCTGGCCTTCTTCGTGCTCACGGGCTACAAGTTCC...GCAGTGAACCTGGCCAAGCTGAAGCTGTTCCGGCATTACTATGTCATGGTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597706.5
CDS-3UTR TCA 90 bp GGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGCTAGCGCCCCAAAAGTaGTTCCAAGAATTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: GAWSTWTPSTSPHTLWKKLAPQK*FQEFKG
Trigger: TCCTTTAAATTCTTGGAATCACTTTTGGGGCGCTAG...CTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000430424.8
CDS-3UTR GCA 90 bp GCCAAACAGATTGGTCATTATTGTACACATAGCTGGAAGGGAGGGGTGGTCCCGCCTCCTCTCGCTCACTaGCATCTCTGGAGCCACCTC +
Preference number: 4 (lower is better)
Translates to: AKQIGHYCTHSWKGGVVPPPLAH*HLWSHL
Trigger: GAGGTGGCTCCAGAGATGGCAGTGAGCGAGAGGAGG...CGGGACCACCCCTCCCTTCCAGCTATGTGTACAATAATGACCAATCTGTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR GCA 90 bp TTCCTGGCACTGAATTGTTGCAGTTGTGGAAGTTCAGGCTGTACTGGCCTTCTTCAGGGACTTCTCTTCTaGCTCCCGGAGGCCCAGCCG +
Preference number: 4 (lower is better)
Translates to: FLALNCCSCGSSGCTGLLQGLLF*LPEAQP
Trigger: CGGCTGGGCCTCCGGGAGGCAGAAGAGAAGTCCCTG...AAGAAGGCCAGTACAGCCTGAACTTCCACAACTGCAACAATTCAGTGCCAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR GCA 90 bp TTCTCCCGGATCATCACCGTGATGTCGAATGGATGCTCCTTTCCTGGCACTGAATGGACACCCAGAAGATaGCAGCGGCCAGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: FSRIITVMSNGCSFPGTEWTPRR*QRPGSR
Trigger: CCTGCTTCCTGGCCGCTGGCATCTTCTGGGTGTCCA...TTCAGTGCCAGGAAAGGAGCATCCATTCGACATCACGGTGATGATCCGGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595908.5
CDS-3UTR GCA 90 bp GATGACCATGACATAGTAATGCCGGAACAGCTTCAGCTTGGCCAGGTTCACTGCCTTGGCCAGGTTCACTaGCACCTTCCCGTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: DDHDIVMPEQLQLGQVHCLGQVH*HLPVCA
Trigger: GGCACAGACGGGAAGGTGGCAGTGAACCTGGCCAAG...GCAGTGAACCTGGCCAAGCTGAAGCTGTTCCGGCATTACTATGTCATGGTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597706.5
CDS-3UTR GCA 90 bp GTACTGGCCTTCTTCCGCCTGAGAGCCGATCACCACGTGGAAACTGAAGTTGTATCCTCCTGGGGCAGCTaGAGGTACGGGTTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: VLAFFRLRADHHVETEVVSSWGS*RYGLFP
Trigger: AGGAAACAACCCGTACCTGCAGCTGCCCCAGGAGGA...TACAACTTCAGTTTCCACGTGGTGATCGGCTCTCAGGCGGAAGAAGGCCAGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595908.5
CDS-3UTR CCA 90 bp GTTCTTCTCCCGGATCATCACCGTGATGTCGAATGGATGCTCCTTTCCTGGCACCCGAAGCTGTTCAGCTaGATGTCCGCTCGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VLLPDHHRDVEWMLLSWHPKLFS*MSARFS
Trigger: GGAGAAGCGAGCGGACATCCAGCTGAACAGCTTCGG...GTGCCAGGAAAGGAGCATCCATTCGACATCACGGTGATGATCCGGGAGAAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR CCA 90 bp AGGTGCGTGTGGGCATCACACCAGGGAAACGCAGACGAAGGATCTGAGCGAGCCCTGCTACTGTTTTTCTaGAGAGGGCAGTCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: RCVWASHQGNADEGSERALLLFF*RGQSWK
Trigger: TTTCCAGGACTGCCCTCTCCAGAAAAACAGTAGCAG...GGCTCGCTCAGATCCTTCGTCTGCGTTTCCCTGGTGTGATGCCCACACGCACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595908.5
CDS-3UTR CCA 90 bp CTGCATGGGGATCACGATCCCAAAGACCTTCTTCTCCTTATCCGACAGGACGTATTGACTTGGGCTTGCTaGCTGCAGAGGTCCCTCCGC +
Preference number: 4 (lower is better)
Translates to: LHGDHDPKDLLLLIRQDVLTWAC*LQRSLR
Trigger: GCGGAGGGACCTCTGCAGCCAGCAAGCCCAAGTCAA...TACGTCCTGTCGGATAAGGAGAAGAAGGTCTTTGGGATCGTGATCCCCATGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp TCCCGGATCATCACCGTGATGTCGAATGGATGCTCCTTTCCTGGCACTGAATTGTTGACTTGGGCTTGCTaGCTGCAGAGGTCCCTCCGC +
Preference number: 4 (lower is better)
Translates to: SRIITVMSNGCSFPGTELLTWAC*LQRSLR
Trigger: GCGGAGGGACCTCTGCAGCCAGCAAGCCCAAGTCAA...CAATTCAGTGCCAGGAAAGGAGCATCCATTCGACATCACGGTGATGATCCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR CCA 90 bp GTCATTATTGTACACATAGCTGGAAGGGAGGGGTGGTCCCGGGGTAAGGACAGGTGGCCAGGACCTGCATaGGGATCACGATCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: VIIVHIAGREGWSRGKDRWPGPA*GSRSQR
Trigger: TCTTTGGGATCGTGATCCCCATGCAGGTCCTGGCCA...CCTGTCCTTACCCCGGGACCACCCCTCCCTTCCAGCTATGTGTACAATAATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264080.11
ENST00000594034.5
CDS-3UTR CCA 90 bp CCCTTTGGTCTGAGATGTGGAGGTGATCATAACAGTTCCCGCCCGCTGGCTGTTACGGGTTGTTTCCTGTaGGCTGGAACTTGTAGCCCG +
Preference number: 4 (lower is better)
Translates to: PFGLRCGGDHNSSRPLAVTGCFL*AGTCSP
Trigger: CGGGCTACAAGTTCCAGCCCACAGGAAACAACCCGT...AACAGCCAGCGGGCGGGAACTGTTATGATCACCTCCACATCTCAGACCAAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GAACCCAGAGTCCGTCATTACTTGCTCCATCTGAACATCCTCCTCGTCCTCCTGCCATACTTCCGCACCTaGACCCTGATCAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: EPRVRHYLLHLNILLVLLPYFRT*TLISPG
Trigger: ACCTGGGCTGATCAGGGTCCAGGTGCGGAAGTATGG...CAGGAGGACGAGGAGGATGTTCAGATGGAGCAAGTAATGACGGACTCTGGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595908.5
CDS-3UTR TCA 90 bp GACAGGACGTACTTGATGAAGGCCCAGCCTGAGCCAATCAGGGCGATGGTGATGGACGACCCTTTGGTCTaGGATGTGGAGGTGATCATA +
Preference number: 4 (lower is better)
Translates to: DRTYLMKAQPEPIRAMVMDDPLV*DVEVII
Trigger: TATGATCACCTCCACATCTCAGACCAAAGGGTCGTC...CATCACCATCGCCCTGATTGGCTCAGGCTGGGCCTTCATCAAGTACGTCCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp CTGCAGGTACGGGTTGTTTCCTGTGGGCTGGAACTTGTAGCCCGTGAGCACGAAGACGACCCTTTGGTCTaGGATGTGGAGGTGATCATA +
Preference number: 4 (lower is better)
Translates to: LQVRVVSCGLELVAREHEDDPLV*DVEVII
Trigger: TATGATCACCTCCACATCTCAGACCAAAGGGTCGTC...TTCGTGCTCACGGGCTACAAGTTCCAGCCCACAGGAAACAACCCGTACCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp CGCTGCCGACAGGAAGCCATCGGGGTTCTTCTCCCGGATCATCACCGTGATGTCATAAACAACGTCTTCTaGTCTCCATACTTCCGCACC +
Preference number: 4 (lower is better)
Translates to: RCRQEAIGVLLPDHHRDVINNVF*SPYFRT
Trigger: GGTGCGGAAGTATGGAGAGCAGAAGACGTTGTTTAT...GACATCACGGTGATGATCCGGGAGAAGAACCCCGATGGCTTCCTGTCGGCAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR GCA 90 bp GTACTGGCCTTCTTCCGCCTGAGAGCCGATCACCACGTGGAAACTGAAGTTGTAGCCCTTCAGCAGGTGTaGGATGTAGTACATGACGGC +
Preference number: 4 (lower is better)
Translates to: VLAFFRLRADHHVETEVVALQQV*DVVHDG
Trigger: GCCGTCATGTACTACATCGCACACCTGCTGAAGGGC...TACAACTTCAGTTTCCACGTGGTGATCGGCTCTCAGGCGGAAGAAGGCCAGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595908.5
CDS-3UTR CCA 90 bp TTCCTGGCACTGAATTGTTGCAGTTGTGGAAGTTCAGGCTGTACTGGCCTTCTTGGGGACTGTGGCCTGTaGCTTCGGGAGCCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: FLALNCCSCGSSGCTGLLGDCGL*LREPWF
Trigger: AAACCAGGGCTCCCGAAGCCACAGGCCACAGTCCCC...AAGAAGGCCAGTACAGCCTGAACTTCCACAACTGCAACAATTCAGTGCCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR CCA 90 bp CATCTCCGCTGCCGACAGGAAGCCATCGGGGTTCTTCTCCCGGATCATCACCGTGAATTGTTGCAGTTGTaGAAGTTCAGGCTGTACTGG +
Preference number: 4 (lower is better)
Translates to: HLRCRQEAIGVLLPDHHRELLQL*KFRLYW
Trigger: CCAGTACAGCCTGAACTTCCACAACTGCAACAATTC...ACGGTGATGATCCGGGAGAAGAACCCCGATGGCTTCCTGTCGGCAGCGGAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR CCA 90 bp TGCTTCCGGGAGGAGCCCGGGAAAGATAAACAACGTCTTCTGCTCTCCATACTTAGGCCTTCGATGGGGTaGCCCTGGCTGTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: CFREEPGKDKQRLLLSILRPSMG*PWLLMK
Trigger: CTTCATCAACAGCCAGGGCCACCCCATCGAAGGCCT...AAGTATGGAGAGCAGAAGACGTTGTTTATCTTTCCCGGGCTCCTCCCGGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595908.5
CDS-3UTR CCA 90 bp TTGGTCATTATTGTACACATAGCTGGAAGGGAGGGGTGGTCCCGGGGTAAGGACGACTCTTCTTCCAAATaGGCTTGTCCGGGAACCGGG +
Preference number: 4 (lower is better)
Translates to: LVIIVHIAGREGWSRGKDDSSSK*ACPGTG
Trigger: CCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGTC...GTCCTTACCCCGGGACCACCCCTCCCTTCCAGCTATGTGTACAATAATGACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR CCA 90 bp GTCATTATTGTACACATAGCTGGAAGGGAGGGGTGGTCCCGGGGTAAGGACAGGTATTGTACACATAGCTaGAAGGGAGGGGTGGTCCCG +
Preference number: 4 (lower is better)
Translates to: VIIVHIAGREGWSRGKDRYCTHS*KGGVVP
Trigger: CGGGACCACCCCTCCCTTCCAGCTATGTGTACAATA...CCTGTCCTTACCCCGGGACCACCCCTCCCTTCCAGCTATGTGTACAATAATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264080.11
ENST00000594034.5
3UTR CAA 72 bp CCAAAGACCTTCTTCTCCTTATCCGACAGGACGTACTaGATGAAGGCCCAGCCTGAGCCAATCAGGGCGATG +
Preference number: 4 (lower is better)
Translates to: PKTFFSLSDRTY*MKAQPEPIRAM
Trigger: CATCGCCCTGATTGGCTCAGGCTGGGCCTTCATCAAGTACGTCCTGTCGGATAAGGAGAAGAAGGTCTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp TTCTCCCGGATCATCACCGTGATGTCGAATGGATGCTCCTTTCCTGGCACTGAAGTGCGATGTAGTACATaGCGGCAAGGCCTTCGATGG +
Preference number: 4 (lower is better)
Translates to: FSRIITVMSNGCSFPGTEVRCST*RQGLRW
Trigger: CCATCGAAGGCCTTGCCGTCATGTACTACATCGCAC...TTCAGTGCCAGGAAAGGAGCATCCATTCGACATCACGGTGATGATCCGGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595908.5
CDS-3UTR TCA 90 bp AGAAGGGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGAGATGTATTACTTGCTCCATCTaGACATCCTCCTCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: RRAGVRNAGGGRPFGLRCITCSI*TSSSSS
Trigger: GGAGGACGAGGAGGATGTTCAGATGGAGCAAGTAAT...ACATCTCAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCCCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp CTGCATGGGGATCACGATCCCAAAGACCTTCTTCTCCTTATCCGACAGGACGTACGCTGGCTGTTTTGTTaGCTTTGGAGAGGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: LHGDHDPKDLLLLIRQDVRWLFC*LWRGLP
Trigger: GGGAAGGCCTCTCCAAAGTCAACAAAACAGCCAGCG...TACGTCCTGTCGGATAAGGAGAAGAAGGTCTTTGGGATCGTGATCCCCATGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp AGTTCAGGCTGTACTGGCCTTCTTCCGCCTGAGAGCCGATCACCACGTGGAAACCTGGCACTGAATTGTTaGAGTTGTGGAAGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: SSGCTGLLPPESRSPRGNLALNC*SCGSSG
Trigger: GCCTGAACTTCCACAACTGCAACAATTCAGTGCCAG...GTTTCCACGTGGTGATCGGCTCTCAGGCGGAAGAAGGCCAGTACAGCCTGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR GCA 90 bp GTACTGGCCTTCTTCCGCCTGAGAGCCGATCACCACGTGGAAACTGAAGTTGTACGGTCCCCAACTCACTaGAGATCCTTGGTGTTGATG +
Preference number: 4 (lower is better)
Translates to: VLAFFRLRADHHVETEVVRSPTH*RSLVLM
Trigger: CATCAACACCAAGGATCTGCAGTGAGTTGGGGACCG...TACAACTTCAGTTTCCACGTGGTGATCGGCTCTCAGGCGGAAGAAGGCCAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595908.5
CDS-3UTR CCA 90 bp GGGGATCACGATCCCAAAGACCTTCTTCTCCTTATCCGACAGGACGTACTTGATCCGAAGCTGTTCAGCTaGATGTCCGCTCGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GDHDPKDLLLLIRQDVLDPKLFS*MSARFS
Trigger: GGAGAAGCGAGCGGACATCCAGCTGAACAGCTTCGG...ATCAAGTACGTCCTGTCGGATAAGGAGAAGAAGGTCTTTGGGATCGTGATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GCCCCCGCCACACACAGCGAAAACAGGTTTCTACATTGTAAACACAACCTCCGTGCCGCCATGAGCCAGTaGATCTTGAAGACGCTGTAC +
Preference number: 4 (lower is better)
Translates to: APATHSENRFLHCKHNLRAAMSQ*ILKTLY
Trigger: GTACAGCGTCTTCAAGATCCACTGGCTCATGGCGGC...ACGGAGGTTGTGTTTACAATGTAGAAACCTGTTTTCGCTGTGTGTGGCGGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR CCA 90 bp TGCTTCCGGGAGGAGCCCGGGAAAGATAAACAACGTCTTCTGCTCTCCATACTTTCCCCACATACGCTGTaGAAGAAGGGCAGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: CFREEPGKDKQRLLLSILSPHTL*KKGRSE
Trigger: CTCACTCCTGCCCTTCTTCCACAGCGTATGTGGGGA...AAGTATGGAGAGCAGAAGACGTTGTTTATCTTTCCCGGGCTCCTCCCGGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595908.5
CDS-3UTR CCA 90 bp CTGCATGGGGATCACGATCCCAAAGACCTTCTTCTCCTTATCCGACAGGACGTAGGGCTGCCCAATATTTaGGGGGAGGAAGGGACTCTT +
Preference number: 4 (lower is better)
Translates to: LHGDHDPKDLLLLIRQDVGLPNI*GEEGTL
Trigger: AAGAGTCCCTTCCTCCCCCCAAATATTGGGCAGCCC...TACGTCCTGTCGGATAAGGAGAAGAAGGTCTTTGGGATCGTGATCCCCATGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp TCCGGGAGGAGCCCGGGAAAGATAAACAACGTCTTCTGCTCTCCATACTTCCGCCTCCTTTCCTGGCACTaGATTGTTGCAGTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: SGRSPGKINNVFCSPYFRLLSWH*IVAVVE
Trigger: TTCCACAACTGCAACAATTCAGTGCCAGGAAAGGAG...GCGGAAGTATGGAGAGCAGAAGACGTTGTTTATCTTTCCCGGGCTCCTCCCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595908.5
CDS-3UTR TCA 90 bp TGCAGTTGTGGAAGTTCAGGCTGTACTGGCCTTCTTCCGCCTGAGAGCCGATCACTCCTTTCCTGGCACTaGATTGTTGCAGTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: CSCGSSGCTGLLPPESRSLLSWH*IVAVVE
Trigger: TTCCACAACTGCAACAATTCAGTGCCAGGAAAGGAG...TGATCGGCTCTCAGGCGGAAGAAGGCCAGTACAGCCTGAACTTCCACAACTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR GCA 90 bp TTTATTGAATATACAAAGACACGGACCCTGTGCCCGCGCCCCCGCCACACACAGCTGGCACTGAATTGTTaGAGTTGTGGAAGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: FIEYTKTRTLCPRPRHTQLALNC*SCGSSG
Trigger: GCCTGAACTTCCACAACTGCAACAATTCAGTGCCAG...CTGTGTGTGGCGGGGGCGCGGGCACAGGGTCCGTGTCTTTGTATATTCAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR GCA 90 bp GTCATTATTGTACACATAGCTGGAAGGGAGGGGTGGTCCCGGGGTAAGGACAGGGTGATGTCGAATGGATaGTCCTTTCCTGGCACTGAA +
Preference number: 4 (lower is better)
Translates to: VIIVHIAGREGWSRGKDRVMSNG*SFPGTE
Trigger: TTCAGTGCCAGGAAAGGAGCATCCATTCGACATCAC...CCTGTCCTTACCCCGGGACCACCCCTCCCTTCCAGCTATGTGTACAATAATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR GCA 90 bp TCCGGGAGGAGCCCGGGAAAGATAAACAACGTCTTCTGCTCTCCATACTTCCGCGTGATGTCGAATGGATaGTCCTTTCCTGGCACTGAA +
Preference number: 4 (lower is better)
Translates to: SGRSPGKINNVFCSPYFRVMSNG*SFPGTE
Trigger: TTCAGTGCCAGGAAAGGAGCATCCATTCGACATCAC...GCGGAAGTATGGAGAGCAGAAGACGTTGTTTATCTTTCCCGGGCTCCTCCCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595908.5
CDS-3UTR CCA 90 bp CTGCATGGGGATCACGATCCCAAAGACCTTCTTCTCCTTATCCGACAGGACGTACACCGTGATGTCGAATaGATGCTCCTTTCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: LHGDHDPKDLLLLIRQDVHRDVE*MLLSWH
Trigger: GTGCCAGGAAAGGAGCATCCATTCGACATCACGGTG...TACGTCCTGTCGGATAAGGAGAAGAAGGTCTTTGGGATCGTGATCCCCATGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp ACGATCCCAAAGACCTTCTTCTCCTTATCCGACAGGACGTACTTGATGAAGGCCTGGCCAGGACCTGCATaGGGATCACGATCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: TIPKTFFSLSDRTYLMKAWPGPA*GSRSQR
Trigger: TCTTTGGGATCGTGATCCCCATGCAGGTCCTGGCCA...GGCCTTCATCAAGTACGTCCTGTCGGATAAGGAGAAGAAGGTCTTTGGGATCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GGGGATCACGATCCCAAAGACCTTCTTCTCCTTATCCGACAGGACGTACTTGATGGAACAGCTTCAGCTTaGCCAGGTTCACTGCCACCT +
Preference number: 4 (lower is better)
Translates to: GDHDPKDLLLLIRQDVLDGTASA*PGSLPP
Trigger: AGGTGGCAGTGAACCTGGCCAAGCTGAAGCTGTTCC...ATCAAGTACGTCCTGTCGGATAAGGAGAAGAAGGTCTTTGGGATCGTGATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR TCA 90 bp CCTTTCCTGGCACTGAATTGTTGCAGTTGTGGAAGTTCAGGCTGTACTGGCCTTAGTTGTAGGAGTTGTTaGGGTGGCTCAGGCCCAACA +
Preference number: 4 (lower is better)
Translates to: PFLALNCCSCGSSGCTGLSCRSC*GGSGPT
Trigger: TGTTGGGCCTGAGCCACCTCAACAACTCCTACAACT...AAGGCCAGTACAGCCTGAACTTCCACAACTGCAACAATTCAGTGCCAGGAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR TCA 90 bp CTGAATTGTTGCAGTTGTGGAAGTTCAGGCTGTACTGGCCTTCTTCCGCCTGAGATTACTTGCTCCATCTaGACATCCTCCTCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: LNCCSCGSSGCTGLLPPEITCSI*TSSSSS
Trigger: GGAGGACGAGGAGGATGTTCAGATGGAGCAAGTAAT...CTCAGGCGGAAGAAGGCCAGTACAGCCTGAACTTCCACAACTGCAACAATTCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595908.5
CDS-3UTR GCA 90 bp GAACCCAGAGTCCGTCATTACTTGCTCCATCTGAACATCCTCCTCGTCCTCCTGGTGATGTCGAATGGATaGTCCTTTCCTGGCACTGAA +
Preference number: 4 (lower is better)
Translates to: EPRVRHYLLHLNILLVLLVMSNG*SFPGTE
Trigger: TTCAGTGCCAGGAAAGGAGCATCCATTCGACATCAC...CAGGAGGACGAGGAGGATGTTCAGATGGAGCAAGTAATGACGGACTCTGGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR GCA 90 bp GTACTGGCCTTCTTCCGCCTGAGAGCCGATCACCACGTGGAAACTGAAGTTGTAGTGATGTCGAATGGATaGTCCTTTCCTGGCACTGAA +
Preference number: 4 (lower is better)
Translates to: VLAFFRLRADHHVETEVVVMSNG*SFPGTE
Trigger: TTCAGTGCCAGGAAAGGAGCATCCATTCGACATCAC...TACAACTTCAGTTTCCACGTGGTGATCGGCTCTCAGGCGGAAGAAGGCCAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR CCA 90 bp TTCTCCCGGATCATCACCGTGATGTCGAATGGATGCTCCTTTCCTGGCACTGAACCTCCAGAGAGCCATTaGTGTAGAAACCGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: FSRIITVMSNGCSFPGTEPPESH*CRNRSC
Trigger: ACAGCTTCGGTTTCTACACCAATGGCTCTCTGGAGG...TTCAGTGCCAGGAAAGGAGCATCCATTCGACATCACGGTGATGATCCGGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR CCA 90 bp GCGCCCCCGCCACACACAGCGAAAACAGGTTTCTACATTGTAAACACAACCTCCCTGCTACTGTTTTTCTaGAGAGGGCAGTCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: APPPHTAKTGFYIVNTTSLLLFF*RGQSWK
Trigger: TTTCCAGGACTGCCCTCTCCAGAAAAACAGTAGCAG...GGAGGTTGTGTTTACAATGTAGAAACCTGTTTTCGCTGTGTGTGGCGGGGGCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR CCA 90 bp AGAAGGGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGAGATGTGAATTGTTGCAGTTGTaGAAGTTCAGGCTGTACTGG +
Preference number: 4 (lower is better)
Translates to: RRAGVRNAGGGRPFGLRCELLQL*KFRLYW
Trigger: CCAGTACAGCCTGAACTTCCACAACTGCAACAATTC...ACATCTCAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCCCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp CAAGACAACGGCGTAGCCAAACAGATTGGTCATTATTGTACACATAGCTGGAAGCGAAGAAGGCCAGGGTaGAGCCCTCCACCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: QDNGVAKQIGHYCTHSWKRRRPG*SPPPRA
Trigger: AGCTCTTGGTGGAGGGCTCCACCCTGGCCTTCTTCG...CTTCCAGCTATGTGTACAATAATGACCAATCTGTTTGGCTACGCCGTTGTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR TCA 90 bp TGTGGAAGAAGGGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGCTTTTACATTCCAGTTaGGCTCCCAGCAATATTTCA +
Preference number: 4 (lower is better)
Translates to: CGRRAGVRNAGGGRPFGLLLHSS*APSNIS
Trigger: TGAAATATTGCTGGGAGCTCAACTGGAATGTAAAAG...CAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCCCTTCTTCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430424.8
CDS-3UTR CCA 90 bp GCCTTCTTCCGCCTGAGAGCCGATCACCACGTGGAAACTGAAGTTGTAGGAGTTGAATTGTTGCAGTTGTaGAAGTTCAGGCTGTACTGG +
Preference number: 4 (lower is better)
Translates to: AFFRLRADHHVETEVVGVELLQL*KFRLYW
Trigger: CCAGTACAGCCTGAACTTCCACAACTGCAACAATTC...AACTCCTACAACTTCAGTTTCCACGTGGTGATCGGCTCTCAGGCGGAAGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
3UTR CAA 72 bp GTGATGTCGAATGGATGCTCCTTTCCTGGCACTGAATaGTTGCAGTTGTGGAAGTTCAGGCTGTACTGGCCT +
Preference number: 4 (lower is better)
Translates to: VMSNGCSFPGTE*LQLWKFRLYWP
Trigger: AGGCCAGTACAGCCTGAACTTCCACAACTGCAACAATTCAGTGCCAGGAAAGGAGCATCCATTCGACATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR TCA 90 bp ACGATCCCAAAGACCTTCTTCTCCTTATCCGACAGGACGTACTTGATGAAGGCCCTCCTTTCCTGGCACTaGATTGTTGCAGTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: TIPKTFFSLSDRTYLMKALLSWH*IVAVVE
Trigger: TTCCACAACTGCAACAATTCAGTGCCAGGAAAGGAG...GGCCTTCATCAAGTACGTCCTGTCGGATAAGGAGAAGAAGGTCTTTGGGATCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CCA 90 bp GGGGATCACGATCCCAAAGACCTTCTTCTCCTTATCCGACAGGACGTACTTGATCTGCTACTGTTTTTCTaGAGAGGGCAGTCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: GDHDPKDLLLLIRQDVLDLLLFF*RGQSWK
Trigger: TTTCCAGGACTGCCCTCTCCAGAAAAACAGTAGCAG...ATCAAGTACGTCCTGTCGGATAAGGAGAAGAAGGTCTTTGGGATCGTGATCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
3UTR CAA 72 bp ATGTCGAATGGATGCTCCTTTCCTGGCACTGAATTGTaGCAGTTGTGGAAGTTCAGGCTGTACTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: MSNGCSFPGTEL*QLWKFRLYWPS
Trigger: AGAAGGCCAGTACAGCCTGAACTTCCACAACTGCAACAATTCAGTGCCAGGAAAGGAGCATCCATTCGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR CCA 90 bp CAAGACAACGGCGTAGCCAAACAGATTGGTCATTATTGTACACATAGCTGGAAGTGTTCCTGCAGAGGATaGACACCCAGAAGATGCCAG +
Preference number: 4 (lower is better)
Translates to: QDNGVAKQIGHYCTHSWKCSCRG*TPRRCQ
Trigger: CTGGCATCTTCTGGGTGTCCATCCTCTGCAGGAACA...CTTCCAGCTATGTGTACAATAATGACCAATCTGTTTGGCTACGCCGTTGTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR TCA 90 bp CAAGACAACGGCGTAGCCAAACAGATTGGTCATTATTGTACACATAGCTGGAAGGACGACCCTTTGGTCTaGGATGTGGAGGTGATCATA +
Preference number: 4 (lower is better)
Translates to: QDNGVAKQIGHYCTHSWKDDPLV*DVEVII
Trigger: TATGATCACCTCCACATCTCAGACCAAAGGGTCGTC...CTTCCAGCTATGTGTACAATAATGACCAATCTGTTTGGCTACGCCGTTGTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR CAA 90 bp CTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCCTTCGGGAGCCCTGGTTaGGAGGGTGCTTCCGGGAGG +
Preference number: 5 (lower is better)
Translates to: LFFQMGLSGNRGPGELGAFGSPG*EGASGR
Trigger: CCTCCCGGAAGCACCCTCCAAACCAGGGCTCCCGAA...GGCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS CCA 90 bp TCCTGCCCCGCCTCCCCGAAACCTGAATCACTGCGGGTGTTGACTTaGGCTTGCTGGCTGCAGAGGTCCCTCCGCCATCCACCTTGCGGG +
Preference number: 5 (lower is better)
Translates to: SCPASPKPESLRVLT*ACWLQRSLRHPPCG
Trigger: CCCGCAAGGTGGATGGCGGAGGGACCTCTGCAGCCAGCAAGCCCAAGTCAACACCCGCAGTGATTCAGGTTTCGGGGAGGCGGGGCAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595108.5
CDS-3UTR CAA 90 bp CTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCCACTGCGGGTGTTGACTaGGGCTTGCTGGCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: LFFQMGLSGNRGPGELGATAGVD*GLLAAE
Trigger: CTCTGCAGCCAGCAAGCCCAAGTCAACACCCGCAGT...GGCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp ACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCTTCTTCCAAATGGGCTaGTCCGGGAACCGGGGTCCC +
Preference number: 5 (lower is better)
Translates to: TLLPNGLVREPGSRGAGRFFQMG*SGNRGP
Trigger: GGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAA...GCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS TCA 90 bp CCAGGAACAGAGATCCTGCGGCACCTGGAAGTCTCCCCACTGGGGTaGGCACCGCCCGGAGAACAGTTATTCACCTCGGCGTGCCTGACC +
Preference number: 5 (lower is better)
Translates to: PGTEILRHLEVSPLG*APPGEQLFTSACLT
Trigger: GGTCAGGCACGCCGAGGTGAATAACTGTTCTCCGGGCGGTGCTCACCCCAGTGGGGAGACTTCCAGGTGCCGCAGGATCTCTGTTCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601402.5
CDS TCA 90 bp TTCCCTCCTGCCCCGCCTCCCCGAAACCTGAATCACTGCGGGTGTTaGCTTGGGCTTGCTGGCTGCAGAGGTCCCTCCGCCATCCACCTT +
Preference number: 5 (lower is better)
Translates to: FPPAPPPRNLNHCGC*LGLAGCRGPSAIHL
Trigger: AAGGTGGATGGCGGAGGGACCTCTGCAGCCAGCAAGCCCAAGTCAACACCCGCAGTGATTCAGGTTTCGGGGAGGCGGGGCAGGAGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595108.5
CDS-3UTR CAA 90 bp GCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGGAGGAGAGAGATGCTCTaGGTGAAGGCCAAGGCCGCC +
Preference number: 5 (lower is better)
Translates to: APGPHGPPPPPHIRCGRRRREML*VKAKAA
Trigger: GGCGGCCTTGGCCTTCACCAAGAGCATCTCTCTCCT...CCTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000597706.5
CDS-3UTR CAA 90 bp CTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCCCCGCTGGCTGTTTTGTaGACTTTGGAGAGGCCTTCC +
Preference number: 5 (lower is better)
Translates to: LFFQMGLSGNRGPGELGAPLAVL*TLERPS
Trigger: GGAAGGCCTCTCCAAAGTCAACAAAACAGCCAGCGG...GGCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp GACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCGCCCGCTGGCTGTTTaGTTGACTTTGGAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: DSSSKWACPGTGVPGSWARPLAV*LTLERP
Trigger: AGGCCTCTCCAAAGTCAACAAAACAGCCAGCGGGCG...CGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS CCA 90 bp AGAACCCAGGAACAGAGATCCTGCGGCACCTGGAAGTCTCCCCACTaGGGTGAGCACCGCCCGGAGAACAGTTATTCACCTCGGCGTGCC +
Preference number: 5 (lower is better)
Translates to: RTQEQRSCGTWKSPH*GEHRPENSYSPRRA
Trigger: GGCACGCCGAGGTGAATAACTGTTCTCCGGGCGGTGCTCACCCCAGTGGGGAGACTTCCAGGTGCCGCAGGATCTCTGTTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601402.5
CDS-3UTR CAA 90 bp GGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGAGATGTGGAGGTTCGGGAGCCCTGGTTaGGAGGGTGCTTCCGGGAGG +
Preference number: 5 (lower is better)
Translates to: GRSEKCWGRTTLWSEMWRFGSPG*EGASGR
Trigger: CCTCCCGGAAGCACCCTCCAAACCAGGGCTCCCGAA...CCTCCACATCTCAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp GCTCAGGCCCAACACCAGGTCCTTGTCCTTCCCACTAGGACCCTGAATCACTGCTTCGGGAGCCCTGGTTaGGAGGGTGCTTCCGGGAGG +
Preference number: 5 (lower is better)
Translates to: AQAQHQVLVLPTRTLNHCFGSPG*EGASGR
Trigger: CCTCCCGGAAGCACCCTCCAAACCAGGGCTCCCGAA...GCAGTGATTCAGGGTCCTAGTGGGAAGGACAAGGACCTGGTGTTGGGCCTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595908.5
CDS-3UTR CAA 90 bp TGTGGAAGAAGGGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGCCTCCGCCATCCACCTaGCGGGGGACTGTGGCCTGT +
Preference number: 5 (lower is better)
Translates to: CGRRAGVRNAGGGRPFGLPPPST*RGTVAC
Trigger: ACAGGCCACAGTCCCCCGCAAGGTGGATGGCGGAGG...CAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCCCTTCTTCCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp CGACCCTTTGGTCTGAGATGTGGAGGTGATCATAACAGTTCCCGCCCGCTGGCTCCTCCGCCATCCACCTaGCGGGGGACTGTGGCCTGT +
Preference number: 5 (lower is better)
Translates to: RPFGLRCGGDHNSSRPLAPPPST*RGTVAC
Trigger: ACAGGCCACAGTCCCCCGCAAGGTGGATGGCGGAGG...AGCCAGCGGGCGGGAACTGTTATGATCACCTCCACATCTCAGACCAAAGGGTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp GACAGGACGTACTTGATGAAGGCCCAGCCTGAGCCAATCAGGGCGATGGTGATGCCTCCGCCATCCACCTaGCGGGGGACTGTGGCCTGT +
Preference number: 5 (lower is better)
Translates to: DRTYLMKAQPEPIRAMVMPPPST*RGTVAC
Trigger: ACAGGCCACAGTCCCCCGCAAGGTGGATGGCGGAGG...CATCACCATCGCCCTGATTGGCTCAGGCTGGGCCTTCATCAAGTACGTCCTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp GGGCATCTCCGCTGCCGACAGGAAGCCATCGGGGTTCTTCTCCCGGATCATCACGGTGTTGACTTGGGCTaGCTGGCTGCAGAGGTCCCT +
Preference number: 5 (lower is better)
Translates to: GHLRCRQEAIGVLLPDHHGVDLG*LAAEVP
Trigger: AGGGACCTCTGCAGCCAGCAAGCCCAAGTCAACACC...GTGATGATCCGGGAGAAGAACCCCGATGGCTTCCTGTCGGCAGCGGAGATGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR CAA 90 bp AGGGACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGAATCACTGCGGGTGTaGACTTGGGCTTGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: RDSSSKWACPGTGVPGSWESLRV*TWACWL
Trigger: CAGCCAGCAAGCCCAAGTCAACACCCGCAGTGATTC...CCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp GGGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAAGCTGCAGGTACGGGTaGTTTCCTGTGGGCTGGAAC +
Preference number: 5 (lower is better)
Translates to: GRLVHMDPLHLPTYAVEESCRYG*FPVGWN
Trigger: GTTCCAGCCCACAGGAAACAACCCGTACCTGCAGCT...TTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp TGGGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGCTGCAGGTACGGGTaGTTTCCTGTGGGCTGGAAC +
Preference number: 5 (lower is better)
Translates to: WAPGPHGPPPPPHIRCGRSCRYG*FPVGWN
Trigger: GTTCCAGCCCACAGGAAACAACCCGTACCTGCAGCT...TCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp TGGGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGACGCCCGCTGGCTGTTTaGTTGACTTTGGAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: WAPGPHGPPPPPHIRCGRRPLAV*LTLERP
Trigger: AGGCCTCTCCAAAGTCAACAAAACAGCCAGCGGGCG...TCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp CCTCGTCCTCCTGGGGCAGCTGCAGGTACGGGTTGTTTCCTGTGGGCTGGAACTTTCTTCCAAATGGGCTaGTCCGGGAACCGGGGTCCC +
Preference number: 5 (lower is better)
Translates to: PRPPGAAAGTGCFLWAGTFFQMG*SGNRGP
Trigger: GGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAA...AGTTCCAGCCCACAGGAAACAACCCGTACCTGCAGCTGCCCCAGGAGGACGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS TCA 90 bp CAGGTGCGTGTGGGCATCACACCAGGGAAACGCAGACGAAGGATCTaGGCGAGCCCCCGGTCCCCAACTCACTGCAGATCCTTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: QVRVGITPGKRRRRI*ASPRSPTHCRSLVL
Trigger: CAACACCAAGGATCTGCAGTGAGTTGGGGACCGGGGGCTCGCTCAGATCCTTCGTCTGCGTTTCCCTGGTGTGATGCCCACACGCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595620.5
ENST00000595908.5
CDS-3UTR CAA 90 bp TGGGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGACCTGGAAATCCCGGGTaGAATAGGAGCGAACTCTGC +
Preference number: 5 (lower is better)
Translates to: WAPGPHGPPPPPHIRCGRPGNPG*NRSELC
Trigger: GCAGAGTTCGCTCCTATTCAACCCGGGATTTCCAGG...TCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp ACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCTGCAGATCCTTGGTGTaGATGAGGAACAGGACCAGG +
Preference number: 5 (lower is better)
Translates to: TLLPNGLVREPGSRGAGRCRSLV*MRNRTR
Trigger: CCTGGTCCTGTTCCTCATCAACACCAAGGATCTGCA...GCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp GTTGTAGGAGTTGTTGAGGTGGCTCAGGCCCAACACCAGGTCCTTGTCCTTCCCTTCGGGAGCCCTGGTTaGGAGGGTGCTTCCGGGAGG +
Preference number: 5 (lower is better)
Translates to: VVGVVEVAQAQHQVLVLPFGSPG*EGASGR
Trigger: CCTCCCGGAAGCACCCTCCAAACCAGGGCTCCCGAA...GGGAAGGACAAGGACCTGGTGTTGGGCCTGAGCCACCTCAACAACTCCTACAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR CAA 90 bp CTCGTCCTCCTGGGGCAGCTGCAGGTACGGGTTGTTTCCTGTGGGCTGGAACTTGGTGTTGACTTGGGCTaGCTGGCTGCAGAGGTCCCT +
Preference number: 5 (lower is better)
Translates to: LVLLGQLQVRVVSCGLELGVDLG*LAAEVP
Trigger: AGGGACCTCTGCAGCCAGCAAGCCCAAGTCAACACC...AAGTTCCAGCCCACAGGAAACAACCCGTACCTGCAGCTGCCCCAGGAGGACGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp TCGTCCTCCTGGGGCAGCTGCAGGTACGGGTTGTTTCCTGTGGGCTGGAACTTGACTGCGGGTGTTGACTaGGGCTTGCTGGCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: SSSWGSCRYGLFPVGWNLTAGVD*GLLAAE
Trigger: CTCTGCAGCCAGCAAGCCCAAGTCAACACCCGCAGT...CAAGTTCCAGCCCACAGGAAACAACCCGTACCTGCAGCTGCCCCAGGAGGACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp GCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGGCCGCTGGCTGTTTTGTaGACTTTGGAGAGGCCTTCC +
Preference number: 5 (lower is better)
Translates to: APGPHGPPPPPHIRCGRRPLAVL*TLERPS
Trigger: GGAAGGCCTCTCCAAAGTCAACAAAACAGCCAGCGG...CCTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp TCGTCCTCCTGGGGCAGCTGCAGGTACGGGTTGTTTCCTGTGGGCTGGAACTTGTTCTTCCAAATGGGCTaGTCCGGGAACCGGGGTCCC +
Preference number: 5 (lower is better)
Translates to: SSSWGSCRYGLFPVGWNLFFQMG*SGNRGP
Trigger: GGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAA...CAAGTTCCAGCCCACAGGAAACAACCCGTACCTGCAGCTGCCCCAGGAGGACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS CCA 90 bp GGAGGCCCAGCCGCAGGACGCTCAACTCCACCTCCAGAGAGCCATTaGTGTAGAAACCGAAGCTGTTCAGCTGGATGTCCGCTCGCTTCT +
Preference number: 5 (lower is better)
Translates to: GGPAAGRSTPPPESH*CRNRSCSAGCPLAS
Trigger: AGAAGCGAGCGGACATCCAGCTGAACAGCTTCGGTTTCTACACCAATGGCTCTCTGGAGGTGGAGTTGAGCGTCCTGCGGCTGGGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595108.5
ENST00000595620.5
ENST00000595908.5
ENST00000597043.1
ENST00000597298.5
ENST00000597706.5
ENST00000598052.5
ENST00000601402.5
ENST00000601716.1
CDS-3UTR CAA 90 bp AGAAGGGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGAGATGTTTCGGGAGCCCTGGTTaGGAGGGTGCTTCCGGGAGG +
Preference number: 5 (lower is better)
Translates to: RRAGVRNAGGGRPFGLRCFGSPG*EGASGR
Trigger: CCTCCCGGAAGCACCCTCCAAACCAGGGCTCCCGAA...ACATCTCAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCCCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp GTACTGGCCTTCTTCCGCCTGAGAGCCGATCACCACGTGGAAACTGAAGTTGTACCTCCGCCATCCACCTaGCGGGGGACTGTGGCCTGT +
Preference number: 5 (lower is better)
Translates to: VLAFFRLRADHHVETEVVPPPST*RGTVAC
Trigger: ACAGGCCACAGTCCCCCGCAAGGTGGATGGCGGAGG...TACAACTTCAGTTTCCACGTGGTGATCGGCTCTCAGGCGGAAGAAGGCCAGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR CAA 90 bp GGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGAGATGTGGAGGGGTGTTGACTTGGGCTaGCTGGCTGCAGAGGTCCCT +
Preference number: 5 (lower is better)
Translates to: GRSEKCWGRTTLWSEMWRGVDLG*LAAEVP
Trigger: AGGGACCTCTGCAGCCAGCAAGCCCAAGTCAACACC...CCTCCACATCTCAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp ACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCATGAGCCAGTGGATCTaGAAGACGCTGTACGTGTTC +
Preference number: 5 (lower is better)
Translates to: TLLPNGLVREPGSRGAGRMSQWI*KTLYVF
Trigger: GAACACGTACAGCGTCTTCAAGATCCACTGGCTCAT...GCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000597706.5
CDS-3UTR CAA 90 bp CTCCGCTGCCGACAGGAAGCCATCGGGGTTCTTCTCCCGGATCATCACCGTGATTCCGACAGGACGTACTaGATGAAGGCCCAGCCTGAG +
Preference number: 5 (lower is better)
Translates to: LRCRQEAIGVLLPDHHRDSDRTY*MKAQPE
Trigger: CTCAGGCTGGGCCTTCATCAAGTACGTCCTGTCGGA...ATCACGGTGATGATCCGGGAGAAGAACCCCGATGGCTTCCTGTCGGCAGCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595908.5
CDS-3UTR CAA 90 bp CTGGGGCAGCTGCAGGTACGGGTTGTTTCCTGTGGGCTGGAACTTGTAGCCCGTTCCGACAGGACGTACTaGATGAAGGCCCAGCCTGAG +
Preference number: 5 (lower is better)
Translates to: LGQLQVRVVSCGLELVARSDRTY*MKAQPE
Trigger: CTCAGGCTGGGCCTTCATCAAGTACGTCCTGTCGGA...ACGGGCTACAAGTTCCAGCCCACAGGAAACAACCCGTACCTGCAGCTGCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp TCGTCCTCCTGGGGCAGCTGCAGGTACGGGTTGTTTCCTGTGGGCTGGAACTTGAGCTGCAGGTACGGGTaGTTTCCTGTGGGCTGGAAC +
Preference number: 5 (lower is better)
Translates to: SSSWGSCRYGLFPVGWNLSCRYG*FPVGWN
Trigger: GTTCCAGCCCACAGGAAACAACCCGTACCTGCAGCT...CAAGTTCCAGCCCACAGGAAACAACCCGTACCTGCAGCTGCCCCAGGAGGACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp TGGGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAGCTGTTTTGTTGACTTaGGAGAGGCCTTCCCGGAAC +
Preference number: 5 (lower is better)
Translates to: WAPGPHGPPPPPHIRCGRAVLLT*ERPSRN
Trigger: GTTCCGGGAAGGCCTCTCCAAAGTCAACAAAACAGC...TCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp CACCTGGACCCTGATCAGCCCAGGTGCGTGTGGGCATCACACCAGGGAAACGCACCGCTGGCTGTTTTGTaGACTTTGGAGAGGCCTTCC +
Preference number: 5 (lower is better)
Translates to: HLDPDQPRCVWASHQGNAPLAVL*TLERPS
Trigger: GGAAGGCCTCTCCAAAGTCAACAAAACAGCCAGCGG...TGCGTTTCCCTGGTGTGATGCCCACACGCACCTGGGCTGATCAGGGTCCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595908.5
CDS-3UTR CAA 90 bp CTCGTCCTCCTGGGGCAGCTGCAGGTACGGGTTGTTTCCTGTGGGCTGGAACTTCGCCCGCTGGCTGTTTaGTTGACTTTGGAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: LVLLGQLQVRVVSCGLELRPLAV*LTLERP
Trigger: AGGCCTCTCCAAAGTCAACAAAACAGCCAGCGGGCG...AAGTTCCAGCCCACAGGAAACAACCCGTACCTGCAGCTGCCCCAGGAGGACGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp GCCCCCGCCACACACAGCGAAAACAGGTTTCTACATTGTAAACACAACCTCCGTCCTCCGCCATCCACCTaGCGGGGGACTGTGGCCTGT +
Preference number: 5 (lower is better)
Translates to: APATHSENRFLHCKHNLRPPPST*RGTVAC
Trigger: ACAGGCCACAGTCCCCCGCAAGGTGGATGGCGGAGG...ACGGAGGTTGTGTTTACAATGTAGAAACCTGTTTTCGCTGTGTGTGGCGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR CAA 90 bp TGTGGAAGAAGGGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGACTGCGGGTGTTGACTaGGGCTTGCTGGCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: CGRRAGVRNAGGGRPFGLTAGVD*GLLAAE
Trigger: CTCTGCAGCCAGCAAGCCCAAGTCAACACCCGCAGT...CAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCCCTTCTTCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp GGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGCCTGGCACTGAATTGTaGCAGTTGTGGAAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: GAWSTWTPSTSPHTLWKKPGTEL*QLWKFR
Trigger: CCTGAACTTCCACAACTGCAACAATTCAGTGCCAGG...CTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp CTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGCCTTTCCTGGCACTGAATaGTTGCAGTTGTGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: LFFQMGLSGNRGPGELGAFPGTE*LQLWKF
Trigger: GAACTTCCACAACTGCAACAATTCAGTGCCAGGAAA...GGCGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp TGGGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAATGAGCCAGTGGATCTaGAAGACGCTGTACGTGTTC +
Preference number: 5 (lower is better)
Translates to: WAPGPHGPPPPPHIRCGRMSQWI*KTLYVF
Trigger: GAACACGTACAGCGTCTTCAAGATCCACTGGCTCAT...TCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000597706.5
CDS-3UTR CAA 90 bp GACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGGCGAGAGTCCGTCATTACTaGCTCCATCTGAACATCCTC +
Preference number: 5 (lower is better)
Translates to: DSSSKWACPGTGVPGSWARVRHY*LHLNIL
Trigger: GAGGATGTTCAGATGGAGCAAGTAATGACGGACTCT...CGCCCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp TGTGGAAGAAGGGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGTTCTTCCAAATGGGCTaGTCCGGGAACCGGGGTCCC +
Preference number: 5 (lower is better)
Translates to: CGRRAGVRNAGGGRPFGLFFQMG*SGNRGP
Trigger: GGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAA...CAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCCCTTCTTCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp AGAAGGGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGAGATGTGGTGTTGACTTGGGCTaGCTGGCTGCAGAGGTCCCT +
Preference number: 5 (lower is better)
Translates to: RRAGVRNAGGGRPFGLRCGVDLG*LAAEVP
Trigger: AGGGACCTCTGCAGCCAGCAAGCCCAAGTCAACACC...ACATCTCAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCCCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp GACAGGACGTACTTGATGAAGGCCCAGCCTGAGCCAATCAGGGCGATGGTGATGGAATCACTGCGGGTGTaGACTTGGGCTTGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: DRTYLMKAQPEPIRAMVMESLRV*TWACWL
Trigger: CAGCCAGCAAGCCCAAGTCAACACCCGCAGTGATTC...CATCACCATCGCCCTGATTGGCTCAGGCTGGGCCTTCATCAAGTACGTCCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp GTCCGTCATTACTTGCTCCATCTGAACATCCTCCTCGTCCTCCTGGGGCAGCTGGAATCACTGCGGGTGTaGACTTGGGCTTGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: VRHYLLHLNILLVLLGQLESLRV*TWACWL
Trigger: CAGCCAGCAAGCCCAAGTCAACACCCGCAGTGATTC...CAGCTGCCCCAGGAGGACGAGGAGGATGTTCAGATGGAGCAAGTAATGACGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp TACAAAGACACGGACCCTGTGCCCGCGCCCCCGCCACACACAGCGAAAACAGGTCCTGGCACTGAATTGTaGCAGTTGTGGAAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: YKDTDPVPAPPPHTAKTGPGTEL*QLWKFR
Trigger: CCTGAACTTCCACAACTGCAACAATTCAGTGCCAGG...ACCTGTTTTCGCTGTGTGTGGCGGGGGCGCGGGCACAGGGTCCGTGTCTTTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR CAA 90 bp TTTATTGAATATACAAAGACACGGACCCTGTGCCCGCGCCCCCGCCACACACAGAGGAGAGAGATGCTCTaGGTGAAGGCCAAGGCCGCC +
Preference number: 5 (lower is better)
Translates to: FIEYTKTRTLCPRPRHTQRREML*VKAKAA
Trigger: GGCGGCCTTGGCCTTCACCAAGAGCATCTCTCTCCT...CTGTGTGTGGCGGGGGCGCGGGCACAGGGTCCGTGTCTTTGTATATTCAATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR CAA 90 bp CTGCAGGTACGGGTTGTTTCCTGTGGGCTGGAACTTGTAGCCCGTGAGCACGAAAGCTGCAGGTACGGGTaGTTTCCTGTGGGCTGGAAC +
Preference number: 5 (lower is better)
Translates to: LQVRVVSCGLELVAREHESCRYG*FPVGWN
Trigger: GTTCCAGCCCACAGGAAACAACCCGTACCTGCAGCT...TTCGTGCTCACGGGCTACAAGTTCCAGCCCACAGGAAACAACCCGTACCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp TGGGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGAGTCCGTCATTACTaGCTCCATCTGAACATCCTC +
Preference number: 5 (lower is better)
Translates to: WAPGPHGPPPPPHIRCGRRVRHY*LHLNIL
Trigger: GAGGATGTTCAGATGGAGCAAGTAATGACGGACTCT...TCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp GGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGAGAGTCCGTCATTACTaGCTCCATCTGAACATCCTC +
Preference number: 5 (lower is better)
Translates to: GAWSTWTPSTSPHTLWKKRVRHY*LHLNIL
Trigger: GAGGATGTTCAGATGGAGCAAGTAATGACGGACTCT...CTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp CTCGTCCTCCTGGGGCAGCTGCAGGTACGGGTTGTTTCCTGTGGGCTGGAACTTGCTGTTTTGTTGACTTaGGAGAGGCCTTCCCGGAAC +
Preference number: 5 (lower is better)
Translates to: LVLLGQLQVRVVSCGLELAVLLT*ERPSRN
Trigger: GTTCCGGGAAGGCCTCTCCAAAGTCAACAAAACAGC...AAGTTCCAGCCCACAGGAAACAACCCGTACCTGCAGCTGCCCCAGGAGGACGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp TGTGGAAGAAGGGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGCGCCCGCTGGCTGTTTaGTTGACTTTGGAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: CGRRAGVRNAGGGRPFGLRPLAV*LTLERP
Trigger: AGGCCTCTCCAAAGTCAACAAAACAGCCAGCGGGCG...CAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCCCTTCTTCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp CGACAGGAAGCCATCGGGGTTCTTCTCCCGGATCATCACCGTGATGTCGAATGGCCTGGAAATCCCGGGTaGAATAGGAGCGAACTCTGC +
Preference number: 5 (lower is better)
Translates to: RQEAIGVLLPDHHRDVEWPGNPG*NRSELC
Trigger: GCAGAGTTCGCTCCTATTCAACCCGGGATTTCCAGG...CCATTCGACATCACGGTGATGATCCGGGAGAAGAACCCCGATGGCTTCCTGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595908.5
CDS-3UTR CAA 90 bp GGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGAGATGTGGAGGTGGACCTGCAGATCCTaGGTGTTGATGAGGAACAGG +
Preference number: 5 (lower is better)
Translates to: GRSEKCWGRTTLWSEMWRWTCRS*VLMRNR
Trigger: CCTGTTCCTCATCAACACCAAGGATCTGCAGGTCCA...CCTCCACATCTCAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000597706.5
CDS-3UTR CAA 90 bp GGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGACTGAATTGTTGCAGTaGTGGAAGTTCAGGCTGTAC +
Preference number: 5 (lower is better)
Translates to: GAWSTWTPSTSPHTLWKKTELLQ*WKFRLY
Trigger: GTACAGCCTGAACTTCCACAACTGCAACAATTCAGT...CTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp AGGGACTCTTCTTCCAAATGGGCTTGTCCGGGAACCGGGGTCCCGGGGAGCTGGACTGAATTGTTGCAGTaGTGGAAGTTCAGGCTGTAC +
Preference number: 5 (lower is better)
Translates to: RDSSSKWACPGTGVPGSWTELLQ*WKFRLY
Trigger: GTACAGCCTGAACTTCCACAACTGCAACAATTCAGT...CCAGCTCCCCGGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAAGAGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp CCAGGACCTGCATGGGGATCACGATCCCAAAGACCTTCTTCTCCTTATCCGACAAGGAGAGAGATGCTCTaGGTGAAGGCCAAGGCCGCC +
Preference number: 5 (lower is better)
Translates to: PGPAWGSRSQRPSSPYPTRREML*VKAKAA
Trigger: GGCGGCCTTGGCCTTCACCAAGAGCATCTCTCTCCT...TGTCGGATAAGGAGAAGAAGGTCTTTGGGATCGTGATCCCCATGCAGGTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597706.5
CDS-3UTR CAA 90 bp AGAAGGGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGAGATGTTCCGACAGGACGTACTaGATGAAGGCCCAGCCTGAG +
Preference number: 5 (lower is better)
Translates to: RRAGVRNAGGGRPFGLRCSDRTY*MKAQPE
Trigger: CTCAGGCTGGGCCTTCATCAAGTACGTCCTGTCGGA...ACATCTCAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCCCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp CCTCGTCCTCCTGGGGCAGCTGCAGGTACGGGTTGTTTCCTGTGGGCTGGAACTAGAGTCCGTCATTACTaGCTCCATCTGAACATCCTC +
Preference number: 5 (lower is better)
Translates to: PRPPGAAAGTGCFLWAGTRVRHY*LHLNIL
Trigger: GAGGATGTTCAGATGGAGCAAGTAATGACGGACTCT...AGTTCCAGCCCACAGGAAACAACCCGTACCTGCAGCTGCCCCAGGAGGACGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp GGCAGGAGTGAGAAATGCTGGGGGAGGACGACCCTTTGGTCTGAGATGTGGAGGGCTGTTTTGTTGACTTaGGAGAGGCCTTCCCGGAAC +
Preference number: 5 (lower is better)
Translates to: GRSEKCWGRTTLWSEMWRAVLLT*ERPSRN
Trigger: GTTCCGGGAAGGCCTCTCCAAAGTCAACAAAACAGC...CCTCCACATCTCAGACCAAAGGGTCGTCCTCCCCCAGCATTTCTCACTCCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000594034.5
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp GAGGTCCACCAGGAACAAAATCTCCTTCCACAGCACGTAGTCGCTGGCGCCTTCCCGCTGGCTGTTTTGTaGACTTTGGAGAGGCCTTCC +
Preference number: 5 (lower is better)
Translates to: EVHQEQNLLPQHVVAGAFPLAVL*TLERPS
Trigger: GGAAGGCCTCTCCAAAGTCAACAAAACAGCCAGCGG...GAAGGCGCCAGCGACTACGTGCTGTGGAAGGAGATTTTGTTCCTGGTGGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp AAACAACGTCTTCTGCTCTCCATACTTCCGCACCTGGACCCTGATCAGCCCAGGCGCCCGCTGGCTGTTTaGTTGACTTTGGAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: KQRLLLSILPHLDPDQPRRPLAV*LTLERP
Trigger: AGGCCTCTCCAAAGTCAACAAAACAGCCAGCGGGCG...CCTGGGCTGATCAGGGTCCAGGTGCGGAAGTATGGAGAGCAGAAGACGTTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595908.5
CDS TCA 90 bp TGGGGTGAGCACCGCCCGGAGAACAGTTATTCACCTCGGCGTGCCTaGCCTTCACCTTCCCGAAGAACTTTTACATTCCAGTTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: WGEHRPENSYSPRRA*PSPSRRTFTFQLSS
Trigger: GGAGCTCAACTGGAATGTAAAAGTTCTTCGGGAAGGTGAAGGTCAGGCACGCCGAGGTGAATAACTGTTCTCCGGGCGGTGCTCACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601402.5
CDS-3UTR CAA 90 bp CGACCCTTTGGTCTGAGATGTGGAGGTGATCATAACAGTTCCCGCCCGCTGGCTTGGACCTGCAGATCCTaGGTGTTGATGAGGAACAGG +
Preference number: 5 (lower is better)
Translates to: RPFGLRCGGDHNSSRPLAWTCRS*VLMRNR
Trigger: CCTGTTCCTCATCAACACCAAGGATCTGCAGGTCCA...AGCCAGCGGGCGGGAACTGTTATGATCACCTCCACATCTCAGACCAAAGGGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597706.5
CDS-3UTR CAA 90 bp CTGAATTGTTGCAGTTGTGGAAGTTCAGGCTGTACTGGCCTTCTTCCGCCTGAGGGTGTTGACTTGGGCTaGCTGGCTGCAGAGGTCCCT +
Preference number: 5 (lower is better)
Translates to: LNCCSCGSSGCTGLLPPEGVDLG*LAAEVP
Trigger: AGGGACCTCTGCAGCCAGCAAGCCCAAGTCAACACC...CTCAGGCGGAAGAAGGCCAGTACAGCCTGAACTTCCACAACTGCAACAATTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR CAA 90 bp GCACTGAATTGTTGCAGTTGTGGAAGTTCAGGCTGTACTGGCCTTCTTCCGCCTACTGCGGGTGTTGACTaGGGCTTGCTGGCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: ALNCCSCGSSGCTGLLPPTAGVD*GLLAAE
Trigger: CTCTGCAGCCAGCAAGCCCAAGTCAACACCCGCAGT...AGGCGGAAGAAGGCCAGTACAGCCTGAACTTCCACAACTGCAACAATTCAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR CAA 90 bp AAGACACGGACCCTGTGCCCGCGCCCCCGCCACACACAGCGAAAACAGGTTTCTACTGAATTGTTGCAGTaGTGGAAGTTCAGGCTGTAC +
Preference number: 5 (lower is better)
Translates to: KTRTLCPRPRHTQRKQVSTELLQ*WKFRLY
Trigger: GTACAGCCTGAACTTCCACAACTGCAACAATTCAGT...AGAAACCTGTTTTCGCTGTGTGTGGCGGGGGCGCGGGCACAGGGTCCGTGTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR CAA 90 bp GCGCCCCCGCCACACACAGCGAAAACAGGTTTCTACATTGTAAACACAACCTCCTCCGACAGGACGTACTaGATGAAGGCCCAGCCTGAG +
Preference number: 5 (lower is better)
Translates to: APPPHTAKTGFYIVNTTSSDRTY*MKAQPE
Trigger: CTCAGGCTGGGCCTTCATCAAGTACGTCCTGTCGGA...GGAGGTTGTGTTTACAATGTAGAAACCTGTTTTCGCTGTGTGTGGCGGGGGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR CAA 90 bp AGCCACCTGCAGCAGGATGGCGATGATGCGGGTGAAGTAGACGTAGCAGATGACGCTGTTTTGTTGACTTaGGAGAGGCCTTCCCGGAAC +
Preference number: 5 (lower is better)
Translates to: SHLQQDGDDAGEVDVADDAVLLT*ERPSRN
Trigger: GTTCCGGGAAGGCCTCTCCAAAGTCAACAAAACAGC...GTCATCTGCTACGTCTACTTCACCCGCATCATCGCCATCCTGCTGCAGGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597706.5
CDS-3UTR CAA 90 bp TTTATTGAATATACAAAGACACGGACCCTGTGCCCGCGCCCCCGCCACACACAGCCGCTGGCTGTTTTGTaGACTTTGGAGAGGCCTTCC +
Preference number: 5 (lower is better)
Translates to: FIEYTKTRTLCPRPRHTQPLAVL*TLERPS
Trigger: GGAAGGCCTCTCCAAAGTCAACAAAACAGCCAGCGG...CTGTGTGTGGCGGGGGCGCGGGCACAGGGTCCGTGTCTTTGTATATTCAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR CAA 90 bp GCCAAACAGATTGGTCATTATTGTACACATAGCTGGAAGGGAGGGGTGGTCCCGTTCTTCCAAATGGGCTaGTCCGGGAACCGGGGTCCC +
Preference number: 5 (lower is better)
Translates to: AKQIGHYCTHSWKGGVVPFFQMG*SGNRGP
Trigger: GGGACCCCGGTTCCCGGACAAGCCCATTTGGAAGAA...CGGGACCACCCCTCCCTTCCAGCTATGTGTACAATAATGACCAATCTGTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS TCA 90 bp GTACCCCTCTATTTAGGACAGGCCCAGAGGATGACAAGAGAAAGTTaGGAGGGACTTCCTCCCTGCAGGGGAAGGGTGGTCCTGCATTCT +
Preference number: 5 (lower is better)
Translates to: VPLYLGQAQRMTRES*EGLPPCRGRVVLHS
Trigger: AGAATGCAGGACCACCCTTCCCCTGCAGGGAGGAAGTCCCTCTCAACTTTCTCTTGTCATCCTCTGGGCCTGTCCTAAATAGAGGGGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601402.5
CDS CCA 90 bp GATGGTGGTGGTGGGGGATTAGGAACACGGACCGTCACCATCAGATaGGTGGTCAGAAAGTTGAATAATGAGGACGGTGGGTGGGACTCA +
Preference number: 5 (lower is better)
Translates to: DGGGGGLGTRTVTIR*VVRKLNNEDGGWDS
Trigger: TGAGTCCCACCCACCGTCCTCATTATTCAACTTTCTGACCACCCATCTGATGGTGACGGTCCGTGTTCCTAATCCCCCACCACCACCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600773.1
CDS-3UTR CAA 90 bp CTGAATTGTTGCAGTTGTGGAAGTTCAGGCTGTACTGGCCTTCTTCCGCCTGAGGAATCACTGCGGGTGTaGACTTGGGCTTGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: LNCCSCGSSGCTGLLPPEESLRV*TWACWL
Trigger: CAGCCAGCAAGCCCAAGTCAACACCCGCAGTGATTC...CTCAGGCGGAAGAAGGCCAGTACAGCCTGAACTTCCACAACTGCAACAATTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR CAA 90 bp CTCCGCTGCCGACAGGAAGCCATCGGGGTTCTTCTCCCGGATCATCACCGTGATACTGAATTGTTGCAGTaGTGGAAGTTCAGGCTGTAC +
Preference number: 5 (lower is better)
Translates to: LRCRQEAIGVLLPDHHRDTELLQ*WKFRLY
Trigger: GTACAGCCTGAACTTCCACAACTGCAACAATTCAGT...ATCACGGTGATGATCCGGGAGAAGAACCCCGATGGCTTCCTGTCGGCAGCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR CAA 90 bp ATCAGCCCAGGTGCGTGTGGGCATCACACCAGGGAAACGCAGACGAAGGATCTGAGAGTCCGTCATTACTaGCTCCATCTGAACATCCTC +
Preference number: 5 (lower is better)
Translates to: ISPGACGHHTRETQTKDLRVRHY*LHLNIL
Trigger: GAGGATGTTCAGATGGAGCAAGTAATGACGGACTCT...CAGATCCTTCGTCTGCGTTTCCCTGGTGTGATGCCCACACGCACCTGGGCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595908.5
CDS-3UTR CAA 90 bp GGCGCCTGGTCCACATGGACCCCCTCCACCTCCCCACATACGCTGTGGAAGAAGACTTTTACATTCCAGTaGAGCTCCCAGCAATATTTC +
Preference number: 5 (lower is better)
Translates to: GAWSTWTPSTSPHTLWKKTFTFQ*SSQQYF
Trigger: GAAATATTGCTGGGAGCTCAACTGGAATGTAAAAGT...CTTCTTCCACAGCGTATGTGGGGAGGTGGAGGGGGTCCATGTGGACCAGGCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430424.8
CDS-3UTR CAA 90 bp GTCCGTCATTACTTGCTCCATCTGAACATCCTCCTCGTCCTCCTGGGGCAGCTGACTCACTGCAGATCCTaGGTGTTGATGAGGAACAGG +
Preference number: 5 (lower is better)
Translates to: VRHYLLHLNILLVLLGQLTHCRS*VLMRNR
Trigger: CCTGTTCCTCATCAACACCAAGGATCTGCAGTGAGT...CAGCTGCCCCAGGAGGACGAGGAGGATGTTCAGATGGAGCAAGTAATGACGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595908.5
CDS TCA 90 bp GTTATTCATTCTCACAACAACCCTCTGTATCCGGGTCTTCTGCCCTaGGACACCAACACCCGCGGAGTCCCTCTCTCCTTCCTTCCAACA +
Preference number: 5 (lower is better)
Translates to: VIHSHNNPLYPGLLP*DTNTRGVPLSFLPT
Trigger: TGTTGGAAGGAAGGAGAGAGGGACTCCGCGGGTGTTGGTGTCTCAGGGCAGAAGACCCGGATACAGAGGGTTGTTGTGAGAATGAATAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595620.5
CDS-3UTR CAA 90 bp GCCCCCGCCACACACAGCGAAAACAGGTTTCTACATTGTAAACACAACCTCCGTCCTGGAAATCCCGGGTaGAATAGGAGCGAACTCTGC +
Preference number: 5 (lower is better)
Translates to: APATHSENRFLHCKHNLRPGNPG*NRSELC
Trigger: GCAGAGTTCGCTCCTATTCAACCCGGGATTTCCAGG...ACGGAGGTTGTGTTTACAATGTAGAAACCTGTTTTCGCTGTGTGTGGCGGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR CAA 90 bp CTGCATGGGGATCACGATCCCAAAGACCTTCTTCTCCTTATCCGACAGGACGTACCTGGAAATCCCGGGTaGAATAGGAGCGAACTCTGC +
Preference number: 5 (lower is better)
Translates to: LHGDHDPKDLLLLIRQDVPGNPG*NRSELC
Trigger: GCAGAGTTCGCTCCTATTCAACCCGGGATTTCCAGG...TACGTCCTGTCGGATAAGGAGAAGAAGGTCTTTGGGATCGTGATCCCCATGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp GCGCCCCCGCCACACACAGCGAAAACAGGTTTCTACATTGTAAACACAACCTCCTGGACCTGCAGATCCTaGGTGTTGATGAGGAACAGG +
Preference number: 5 (lower is better)
Translates to: APPPHTAKTGFYIVNTTSWTCRS*VLMRNR
Trigger: CCTGTTCCTCATCAACACCAAGGATCTGCAGGTCCA...GGAGGTTGTGTTTACAATGTAGAAACCTGTTTTCGCTGTGTGTGGCGGGGGCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR CAA 90 bp TTTATTGAATATACAAAGACACGGACCCTGTGCCCGCGCCCCCGCCACACACAGATGAGCCAGTGGATCTaGAAGACGCTGTACGTGTTC +
Preference number: 5 (lower is better)
Translates to: FIEYTKTRTLCPRPRHTQMSQWI*KTLYVF
Trigger: GAACACGTACAGCGTCTTCAAGATCCACTGGCTCAT...CTGTGTGTGGCGGGGGCGCGGGCACAGGGTCCGTGTCTTTGTATATTCAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR CAA 90 bp GGCGTAGCCAAACAGATTGGTCATTATTGTACACATAGCTGGAAGGGAGGGGTGAGCTGCAGGTACGGGTaGTTTCCTGTGGGCTGGAAC +
Preference number: 5 (lower is better)
Translates to: GVAKQIGHYCTHSWKGGVSCRYG*FPVGWN
Trigger: GTTCCAGCCCACAGGAAACAACCCGTACCTGCAGCT...CACCCCTCCCTTCCAGCTATGTGTACAATAATGACCAATCTGTTTGGCTACGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS GCA 90 bp CAATTGTTATTCATTCTCACAACAACCCTCTGTATCCGGGTCTTCTaGCCTGAGACACCAACACCCGCGGAGTCCCTCTCTCCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: QLLFILTTTLCIRVF*PETPTPAESLSPSF
Trigger: GAAGGAAGGAGAGAGGGACTCCGCGGGTGTTGGTGTCTCAGGGCAGAAGACCCGGATACAGAGGGTTGTTGTGAGAATGAATAACAATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595620.5
CDS-3UTR CAA 90 bp GACCTGCATGGGGATCACGATCCCAAAGACCTTCTTCTCCTTATCCGACAGGACCCTGGCACTGAATTGTaGCAGTTGTGGAAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: DLHGDHDPKDLLLLIRQDPGTEL*QLWKFR
Trigger: CCTGAACTTCCACAACTGCAACAATTCAGTGCCAGG...GTCCTGTCGGATAAGGAGAAGAAGGTCTTTGGGATCGTGATCCCCATGCAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp CTGAATTGTTGCAGTTGTGGAAGTTCAGGCTGTACTGGCCTTCTTCCGCCTGAGCCTGGCACTGAATTGTaGCAGTTGTGGAAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: LNCCSCGSSGCTGLLPPEPGTEL*QLWKFR
Trigger: CCTGAACTTCCACAACTGCAACAATTCAGTGCCAGG...CTCAGGCGGAAGAAGGCCAGTACAGCCTGAACTTCCACAACTGCAACAATTCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR CAA 90 bp TGTTGCAGTTGTGGAAGTTCAGGCTGTACTGGCCTTCTTCCGCCTGAGAGCCGATTTCCTGGCACTGAATaGTTGCAGTTGTGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: CCSCGSSGCTGLLPPESRFPGTE*LQLWKF
Trigger: GAACTTCCACAACTGCAACAATTCAGTGCCAGGAAA...TCGGCTCTCAGGCGGAAGAAGGCCAGTACAGCCTGAACTTCCACAACTGCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR CAA 90 bp CAAGACAACGGCGTAGCCAAACAGATTGGTCATTATTGTACACATAGCTGGAAGGAATCACTGCGGGTGTaGACTTGGGCTTGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: QDNGVAKQIGHYCTHSWKESLRV*TWACWL
Trigger: CAGCCAGCAAGCCCAAGTCAACACCCGCAGTGATTC...CTTCCAGCTATGTGTACAATAATGACCAATCTGTTTGGCTACGCCGTTGTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS-3UTR CAA 90 bp ATTGTTGCAGTTGTGGAAGTTCAGGCTGTACTGGCCTTCTTCCGCCTGAGAGCCACTGAATTGTTGCAGTaGTGGAAGTTCAGGCTGTAC +
Preference number: 5 (lower is better)
Translates to: IVAVVEVQAVLAFFRLRATELLQ*WKFRLY
Trigger: GTACAGCCTGAACTTCCACAACTGCAACAATTCAGT...GGCTCTCAGGCGGAAGAAGGCCAGTACAGCCTGAACTTCCACAACTGCAACAAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000598052.5
CDS-3UTR CAA 90 bp ACGATCCCAAAGACCTTCTTCTCCTTATCCGACAGGACGTACTTGATGAAGGCCCCTGGCACTGAATTGTaGCAGTTGTGGAAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: TIPKTFFSLSDRTYLMKAPGTEL*QLWKFR
Trigger: CCTGAACTTCCACAACTGCAACAATTCAGTGCCAGG...GGCCTTCATCAAGTACGTCCTGTCGGATAAGGAGAAGAAGGTCTTTGGGATCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp GAACCCAGAGTCCGTCATTACTTGCTCCATCTGAACATCCTCCTCGTCCTCCTGTTTCCTGGCACTGAATaGTTGCAGTTGTGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: EPRVRHYLLHLNILLVLLFPGTE*LQLWKF
Trigger: GAACTTCCACAACTGCAACAATTCAGTGCCAGGAAA...CAGGAGGACGAGGAGGATGTTCAGATGGAGCAAGTAATGACGGACTCTGGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp CCAGGACCTGCATGGGGATCACGATCCCAAAGACCTTCTTCTCCTTATCCGACATTTCCTGGCACTGAATaGTTGCAGTTGTGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: PGPAWGSRSQRPSSPYPTFPGTE*LQLWKF
Trigger: GAACTTCCACAACTGCAACAATTCAGTGCCAGGAAA...TGTCGGATAAGGAGAAGAAGGTCTTTGGGATCGTGATCCCCATGCAGGTCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595908.5
ENST00000597706.5
CDS-3UTR CAA 90 bp GCCCCCGCCACACACAGCGAAAACAGGTTTCTACATTGTAAACACAACCTCCGTTTTCCTGGCACTGAATaGTTGCAGTTGTGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: APATHSENRFLHCKHNLRFPGTE*LQLWKF
Trigger: GAACTTCCACAACTGCAACAATTCAGTGCCAGGAAA...ACGGAGGTTGTGTTTACAATGTAGAAACCTGTTTTCGCTGTGTGTGGCGGGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264080.11
CDS GCA 72 bp GAGCAGCCACCCAGCAGCAGCACCAGAAGTAGCCGCTaGCCCCACTCCGCGGGGCTCCCGCGGCCGAGCCCC +
Preference number: 6 (lower is better)
Translates to: EQPPSSSTRSSR*PHSAGLPRPSP
Trigger: GGGGCTCGGCCGCGGGAGCCCCGCGGAGTGGGGGCAGCGGCTACTTCTGGTGCTGCTGCTGGGTGGCTGCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264080.11
ENST00000597706.5
ENST00000601716.1
CDS TCA 72 bp GCCCCGCCTCCCCGAAACCTGAATCACTGCGGGTGTTaGCTTGGGCTTGCTGGCTGCAGAGGTCCCTCCGCC +
Preference number: 6 (lower is better)
Translates to: APPPRNLNHCGC*LGLAGCRGPSA
Trigger: GGCGGAGGGACCTCTGCAGCCAGCAAGCCCAAGTCAACACCCGCAGTGATTCAGGTTTCGGGGAGGCGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595108.5
CDS GCA 72 bp GCTGAGACTGAACCCCACCAGCAGGGACTTCTCTTCTaGCTCCCGGAGGCCCAGCCGCAGGACGCTCAACTC +
Preference number: 6 (lower is better)
Translates to: AETEPHQQGLLF*LPEAQPQDAQL
Trigger: GAGTTGAGCGTCCTGCGGCTGGGCCTCCGGGAGGCAGAAGAGAAGTCCCTGCTGGTGGGGTTCAGTCTCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595108.5
ENST00000595620.5
ENST00000595908.5
ENST00000597043.1
ENST00000597298.5
ENST00000597706.5
ENST00000598052.5
ENST00000601402.5
CDS CAA 72 bp TGCCCCGCCTCCCCGAAACCTGAATCACTGCGGGTGTaGACTTGGGCTTGCTGGCTGCAGAGGTCCCTCCGC +
Preference number: 6 (lower is better)
Translates to: CPASPKPESLRV*TWACWLQRSLR
Trigger: GCGGAGGGACCTCTGCAGCCAGCAAGCCCAAGTCAACACCCGCAGTGATTCAGGTTTCGGGGAGGCGGGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595108.5
CDS TCA 72 bp GAGATCCTGCGGCACCTGGAAGTCTCCCCACTGGGGTaGGCACCGCCCGGAGAACAGTTATTCACCTCGGCG +
Preference number: 6 (lower is better)
Translates to: EILRHLEVSPLG*APPGEQLFTSA
Trigger: CGCCGAGGTGAATAACTGTTCTCCGGGCGGTGCTCACCCCAGTGGGGAGACTTCCAGGTGCCGCAGGATCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601402.5
CDS TCA 72 bp GGCGCCCTTCAGCTCACAGGTGTGCGATGTAGTACATaGCGGCAAGGCCTTCGATGGGGTGGCCCTGGCTGT +
Preference number: 6 (lower is better)
Translates to: GALQLTGVRCST*RQGLRWGGPGC
Trigger: ACAGCCAGGGCCACCCCATCGAAGGCCTTGCCGTCATGTACTACATCGCACACCTGTGAGCTGAAGGGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597706.5
CDS TCA 72 bp GTGGGCATCACACCAGGGAAACGCAGACGAAGGATCTaGGCGAGCCCCCGGTCCCCAACTCACTGCAGATCC +
Preference number: 6 (lower is better)
Translates to: VGITPGKRRRRI*ASPRSPTHCRS
Trigger: GGATCTGCAGTGAGTTGGGGACCGGGGGCTCGCTCAGATCCTTCGTCTGCGTTTCCCTGGTGTGATGCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595620.5
ENST00000595908.5
CDS CCA 72 bp GCCTCCCCGAAACCTGAATCACTGCGGGTGTTGACTTaGGCTTGCTGGCTGCAGAGGTCCCTCCGCCATCCA +
Preference number: 6 (lower is better)
Translates to: ASPKPESLRVLT*ACWLQRSLRHP
Trigger: TGGATGGCGGAGGGACCTCTGCAGCCAGCAAGCCCAAGTCAACACCCGCAGTGATTCAGGTTTCGGGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595108.5
CDS GCA 72 bp AAGCTGTTCAGCTGGATGTCCGCTCGCTTCTCCCCCTaGCGGAGACCAAGGAGGCAGAGGCAGTTCAGACCT +
Preference number: 6 (lower is better)
Translates to: KLFSWMSARFSP*RRPRRQRQFRP
Trigger: AGGTCTGAACTGCCTCTGCCTCCTTGGTCTCCGGCAGGGGGAGAAGCGAGCGGACATCCAGCTGAACAGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597043.1
ENST00000601402.5
CDS CCA 72 bp AAACCTGAATCACTGCGGGTGTTGACTTGGGCTTGCTaGCTGCAGAGGTCCCTCCGCCATCCACCTTGCGGG +
Preference number: 6 (lower is better)
Translates to: KPESLRVLTWAC*LQRSLRHPPCG
Trigger: CCCGCAAGGTGGATGGCGGAGGGACCTCTGCAGCCAGCAAGCCCAAGTCAACACCCGCAGTGATTCAGGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595108.5
CDS CCA 72 bp GAACAGAGATCCTGCGGCACCTGGAAGTCTCCCCACTaGGGTGAGCACCGCCCGGAGAACAGTTATTCACCT +
Preference number: 6 (lower is better)
Translates to: EQRSCGTWKSPH*GEHRPENSYSP
Trigger: AGGTGAATAACTGTTCTCCGGGCGGTGCTCACCCCAGTGGGGAGACTTCCAGGTGCCGCAGGATCTCTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601402.5
CDS TCA 72 bp TCTCACAACAACCCTCTGTATCCGGGTCTTCTGCCCTaGGACACCAACACCCGCGGAGTCCCTCTCTCCTTC +
Preference number: 6 (lower is better)
Translates to: SHNNPLYPGLLP*DTNTRGVPLSF
Trigger: GAAGGAGAGAGGGACTCCGCGGGTGTTGGTGTCTCAGGGCAGAAGACCCGGATACAGAGGGTTGTTGTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595620.5
CDS CCA 72 bp GCCGCAGGACGCTCAACTCCACCTCCAGAGAGCCATTaGTGTAGAAACCGAAGCTGTTCAGCTGGATGTCCG +
Preference number: 6 (lower is better)
Translates to: AAGRSTPPPESH*CRNRSCSAGCP
Trigger: CGGACATCCAGCTGAACAGCTTCGGTTTCTACACCAATGGCTCTCTGGAGGTGGAGTTGAGCGTCCTGCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595108.5
ENST00000595620.5
ENST00000595908.5
ENST00000597043.1
ENST00000597298.5
ENST00000597706.5
ENST00000598052.5
ENST00000601402.5
ENST00000601716.1
CDS GCA 72 bp TCCGGGAGGAGCCCGGGAAAGATAAACAACGTCTTCTaGTCTCCATACTTCCGCACCTGGACCTGCAGATCC +
Preference number: 6 (lower is better)
Translates to: SGRSPGKINNVF*SPYFRTWTCRS
Trigger: GGATCTGCAGGTCCAGGTGCGGAAGTATGGAGAGCAGAAGACGTTGTTTATCTTTCCCGGGCTCCTCCCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000595108.5
ENST00000597298.5
ENST00000597706.5
ENST00000601716.1
CDS CCA 72 bp ATGCTCTTGGTGAAGGCCAAGGCCGCCATGAGCCAGTaGATCTTGAAGACGCTGTACGTGTTCCTGCAGAGG +
Preference number: 6 (lower is better)
Translates to: MLLVKAKAAMSQ*ILKTLYVFLQR
Trigger: CCTCTGCAGGAACACGTACAGCGTCTTCAAGATCCACTGGCTCATGGCGGCCTTGGCCTTCACCAAGAGCAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264080.11
ENST00000430424.8
ENST00000597706.5
CDS CAA 90 bp GGTACCCCTCTATTTAGGACAGGCCCAGAGGATGACAAGAGAAAGTaGAGAGGGACTTCCTCCCTGCAGGGGAAGGGTGGTCCTGCATTC +
Preference number: 6 (lower is better)
Translates to: GTPLFRTGPEDDKRK*RGTSSLQGKGGPAF
Trigger: GAATGCAGGACCACCCTTCCCCTGCAGGGAGGAAGTCCCTCTCAACTTTCTCTTGTCATCCTCTGGGCCTGTCCTAAATAGAGGGGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601402.5
CDS GCA 72 bp TTCATTCTCACAACAACCCTCTGTATCCGGGTCTTCTaGCCTGAGACACCAACACCCGCGGAGTCCCTCTCT +
Preference number: 6 (lower is better)
Translates to: FILTTTLCIRVF*PETPTPAESLS
Trigger: AGAGAGGGACTCCGCGGGTGTTGGTGTCTCAGGGCAGAAGACCCGGATACAGAGGGTTGTTGTGAGAATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595620.5
CDS TCA 72 bp CACCGCCCGGAGAACAGTTATTCACCTCGGCGTGCCTaGCCTTCACCTTCCCGAAGAACTTTTACATTCCAG +
Preference number: 6 (lower is better)
Translates to: HRPENSYSPRRA*PSPSRRTFTFQ
Trigger: CTGGAATGTAAAAGTTCTTCGGGAAGGTGAAGGTCAGGCACGCCGAGGTGAATAACTGTTCTCCGGGCGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601402.5
CDS TCA 72 bp TATTTAGGACAGGCCCAGAGGATGACAAGAGAAAGTTaGGAGGGACTTCCTCCCTGCAGGGGAAGGGTGGTC +
Preference number: 6 (lower is better)
Translates to: YLGQAQRMTRES*EGLPPCRGRVV
Trigger: GACCACCCTTCCCCTGCAGGGAGGAAGTCCCTCTCAACTTTCTCTTGTCATCCTCTGGGCCTGTCCTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601402.5
CDS CCA 72 bp GGTGGGGGATTAGGAACACGGACCGTCACCATCAGATaGGTGGTCAGAAAGTTGAATAATGAGGACGGTGGG +
Preference number: 6 (lower is better)
Translates to: GGGLGTRTVTIR*VVRKLNNEDGG
Trigger: CCCACCGTCCTCATTATTCAACTTTCTGACCACCCATCTGATGGTGACGGTCCGTGTTCCTAATCCCCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600773.1
CDS CCA 72 bp AGGAAACTGCTACTGTTTTTCTGGAGAGGGCAGTCCTaGAAATCCCGGGTCAGCAGGGACTTCTCTTCTGCC +
Preference number: 6 (lower is better)
Translates to: RKLLLFFWRGQS*KSRVSRDFSSA
Trigger: GGCAGAAGAGAAGTCCCTGCTGACCCGGGATTTCCAGGACTGCCCTCTCCAGAAAAACAGTAGCAGTTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601716.1
CDS CAA 72 bp CTATTTAGGACAGGCCCAGAGGATGACAAGAGAAAGTaGAGAGGGACTTCCTCCCTGCAGGGGAAGGGTGGT +
Preference number: 6 (lower is better)
Translates to: LFRTGPEDDKRK*RGTSSLQGKGG
Trigger: ACCACCCTTCCCCTGCAGGGAGGAAGTCCCTCTCAACTTTCTCTTGTCATCCTCTGGGCCTGTCCTAAATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601402.5
CDS TCA 72 bp CGCTGTGCGGCTCCAGGGTCTCTAGCGCCCCAAAAGTaGTTCCAAGAATTTAAAGGACTAAGACCCAGTTGG +
Preference number: 6 (lower is better)
Translates to: RCAAPGSLAPQK*FQEFKGLRPSW
Trigger: CCAACTGGGTCTTAGTCCTTTAAATTCTTGGAATCACTTTTGGGGCGCTAGAGACCCTGGAGCCGCACAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430424.8
ENST00000595108.5
ENST00000601402.5