RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPR107 (Homo sapiens)

Ensembl gene IDs: ENSG00000148358

Ensembl transcript IDs: ENST00000347136.11, ENST00000372406.5, ENST00000372410.7, ENST00000415344.1, ENST00000483935.1, ENST00000493417.5, ENST00000610997.1

Found 1170 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCAGTCTGAGGGCTGCGGCTCCAGCGCTTGTCCACACACACGCCTaGCTCTCTCTAGTTCCTCCACTGCCTGGCTTCCTCGCTTGCAAA +
Preference number: 1 (lower is better)
Translates to: ASLRAAAPALVHTHA*LSLVPPLPGFLACK
Trigger: TTTGCAAGCGAGGAAGCCAGGCAGTGGAGGAACTAGAGAGAGGCAGGCGTGTGTGTGGACAAGCGCTGGAGCCGCAGCCCTCAGACTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR CCA 90 bp GACCACTGGGCCTCAGGAGCTGCTGTCCTGGTCACTCTCAGCATCTaGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGAATCCTGGGGC +
Preference number: 1 (lower is better)
Translates to: DHWASGAAVLVTLSI*NKGLGQSRGQESWG
Trigger: GCCCCAGGATTCCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGCAGCTCCTGAGGCCCAGTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR CCA 90 bp GGGGAAGGGCGAGGGCAGAGGAGGAGAGAAGAGGGAGGGAGGCTGTaGAATGAGACAGCAGAGATGGCGATGAGGTCATCACGCAGGAGG +
Preference number: 1 (lower is better)
Translates to: GEGRGQRRREEGGRL*NETAEMAMRSSRRR
Trigger: CCTCCTGCGTGATGACCTCATCGCCATCTCTGCTGTCTCATTCCACAGCCTCCCTCCCTCTTCTCTCCTCCTCTGCCCTCGCCCTTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR TCA 90 bp GGAAGGGTCAGGACCAGCACTGCAGACACTCGGCCATGCTGTGAGTaGGCCCAGACATACGCGTGGAATCTGAACACCCAACGCTGGCGT +
Preference number: 1 (lower is better)
Translates to: GRVRTSTADTRPCCE*AQTYAWNLNTQRWR
Trigger: ACGCCAGCGTTGGGTGTTCAGATTCCACGCGTATGTCTGGGCTCACTCACAGCATGGCCGAGTGTCTGCAGTGCTGGTCCTGACCCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR TCA 90 bp TACTGTTGCCGTGGAGCTGAGCAGAGAGAGCTGTCCCATGCTGCCTaGCCCGCTGACAGCCAAGCAGAGCTTAGCATGGGCCGAGTCTCA +
Preference number: 1 (lower is better)
Translates to: YCCRGAEQRELSHAA*PADSQAELSMGRVS
Trigger: TGAGACTCGGCCCATGCTAAGCTCTGCTTGGCTGTCAGCGGGTCAGGCAGCATGGGACAGCTCTCTCTGCTCAGCTCCACGGCAACAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR GCA 90 bp CCGGCCGCTCGGCTTCTAGCTGCCTACCCAAAGAACCCCGTGTTATaGGGACGGACCAAGCCAAAGGCTCCCAGCAGGGGAATGATAAAC +
Preference number: 1 (lower is better)
Translates to: PAARLLAAYPKNPVL*GRTKPKAPSRGMIN
Trigger: GTTTATCATTCCCCTGCTGGGAGCCTTTGGCTTGGTCCGTCCGCATAACACGGGGTTCTTTGGGTAGGCAGCTAGAAGCCGAGCGGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR GCA 90 bp GCAGTAAAGGAGACGATGCTGCGACCCGGCCGCTCGGCTTCTAGCTaGCTACCCAAAGAACCCCGTGTTATGCGGACGGACCAAGCCAAA +
Preference number: 1 (lower is better)
Translates to: AVKETMLRPGRSASS*LPKEPRVMRTDQAK
Trigger: TTTGGCTTGGTCCGTCCGCATAACACGGGGTTCTTTGGGTAGGCAGCTAGAAGCCGAGCGGCCGGGTCGCAGCATCGTCTCCTTTACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR CCA 90 bp CAGGAGCTGCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTaGGGCAAAGCCGAGGGCAGGAATCCTGGGGCAGGTGCTACATCC +
Preference number: 1 (lower is better)
Translates to: QELLSWSLSASGIRV*GKAEGRNPGAGATS
Trigger: GGATGTAGCACCTGCCCCAGGATTCCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGCAGCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR CCA 90 bp CCCACACGAGGTGGACTTACAGGGCTGTGTGCTGCCTGGGCAGGCTaGACATGTCCAGGGCGGGGAAACCCTGGATATTTCACTCTGAAG +
Preference number: 1 (lower is better)
Translates to: PTRGGLTGLCAAWAG*TCPGRGNPGYFTLK
Trigger: CTTCAGAGTGAAATATCCAGGGTTTCCCCGCCCTGGACATGTCCAGCCTGCCCAGGCAGCACACAGCCCTGTAAGTCCACCTCGTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR TCA 90 bp CTCTGGAAGGGTCAGGACCAGCACTGCAGACACTCGGCCATGCTGTaGGTGAGCCCAGACATACGCGTGGAATCTGAACACCCAACGCTG +
Preference number: 1 (lower is better)
Translates to: LWKGQDQHCRHSAML*VSPDIRVESEHPTL
Trigger: CAGCGTTGGGTGTTCAGATTCCACGCGTATGTCTGGGCTCACTCACAGCATGGCCGAGTGTCTGCAGTGCTGGTCCTGACCCTTCCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR CCA 90 bp GAGGTGTTTCTTCCTCTGCATGGGGAGATGCTGTTTGGCGCCCGCTaGCAGGACCTGCCTTCCTTTACTGTTGCCGTGGAGCTGAGCAGA +
Preference number: 1 (lower is better)
Translates to: EVFLPLHGEMLFGAR*QDLPSFTVAVELSR
Trigger: TCTGCTCAGCTCCACGGCAACAGTAAAGGAAGGCAGGTCCTGCCAGCGGGCGCCAAACAGCATCTCCCCATGCAGAGGAAGAAACACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR GCA 90 bp CTCCTGCACTCCTCTCCACTGTTTAGAAGGAGGTGTTTCTTCCTCTaGATGGGGAGATGCTGTTTGGCGCCCGCTGGCAGGACCTGCCTT +
Preference number: 1 (lower is better)
Translates to: LLHSSPLFRRRCFFL*MGRCCLAPAGRTCL
Trigger: AAGGCAGGTCCTGCCAGCGGGCGCCAAACAGCATCTCCCCATGCAGAGGAAGAAACACCTCCTTCTAAACAGTGGAGAGGAGTGCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR CCA 90 bp CACACGGATGCTTGCCTAAAATATCTGCCGAGAGGTGAGCAGCTGTaGCCTGGGAAGGCGCTTGCTCTTCCTCCACATCAGCCAGAAGGC +
Preference number: 1 (lower is better)
Translates to: HTDACLKYLPRGEQL*PGKALALPPHQPEG
Trigger: GCCTTCTGGCTGATGTGGAGGAAGAGCAAGCGCCTTCCCAGGCCACAGCTGCTCACCTCTCGGCAGATATTTTAGGCAAGCATCCGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR TCA 90 bp GAGAAGAGGGAGGGAGGCTGTGGAATGAGACAGCAGAGATGGCGATaGGGTCATCACGCAGGAGGAAATCTCACCCACACGAGGTGGACT +
Preference number: 1 (lower is better)
Translates to: EKREGGCGMRQQRWR*GHHAGGNLTHTRWT
Trigger: AGTCCACCTCGTGTGGGTGAGATTTCCTCCTGCGTGATGACCTCATCGCCATCTCTGCTGTCTCATTCCACAGCCTCCCTCCCTCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR TCA 90 bp GACCCCACATCCTGTGGTTTCTGCCTGACCCTTCTAAGCCAGAGGTaGGAAAACAACTCCCAGAGACCACGACTCTCACCCTCGGAGGTA +
Preference number: 1 (lower is better)
Translates to: DPTSCGFCLTLLSQR*ENNSQRPRLSPSEV
Trigger: TACCTCCGAGGGTGAGAGTCGTGGTCTCTGGGAGTTGTTTTCTCACCTCTGGCTTAGAAGGGTCAGGCAGAAACCACAGGATGTGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR GCA 90 bp TCCATCAGGCAACATCTCAGTCAGAAAACCACCTCCCACCACCTGTaGTGTGCCACAGGGCATGATCCTGACAGCGACATCACAGCCTTC +
Preference number: 1 (lower is better)
Translates to: SIRQHLSQKTTSHHL*CATGHDPDSDITAF
Trigger: GAAGGCTGTGATGTCGCTGTCAGGATCATGCCCTGTGGCACAGCACAGGTGGTGGGAGGTGGTTTTCTGACTGAGATGTTGCCTGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR GCA 90 bp CGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTTCGTTCTTaGCAAGGAGTCTATCGCCTCATCCACAACATCTGCTTGCGGGAG +
Preference number: 1 (lower is better)
Translates to: RRPFRAGRFHHTFRS*QGVYRLIHNICLRE
Trigger: CTCCCGCAAGCAGATGTTGTGGATGAGGCGATAGACTCCTTGGCAAGAACGAAAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR CCA 90 bp ACGCAGAGAGGCTCAGATGCATCGCTGGGCTACAGAAGTGGCCTCTaGGGAATCTGGAGTATGTTCAGCCTGCCGACCGATAACTACGTT +
Preference number: 1 (lower is better)
Translates to: TQRGSDASLGYRSGL*GIWSMFSLPTDNYV
Trigger: AACGTAGTTATCGGTCGGCAGGCTGAACATACTCCAGATTCCCCAGAGGCCACTTCTGTAGCCCAGCGATGCATCTGAGCCTCTCTGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR CCA 90 bp TGTTTAGAAGGAGGTGTTTCTTCCTCTGCATGGGGAGATGCTGTTTaGCGCCCGCTGGCAGGACCTGCCTTCCTTTACTGTTGCCGTGGA +
Preference number: 1 (lower is better)
Translates to: CLEGGVSSSAWGDAV*RPLAGPAFLYCCRG
Trigger: TCCACGGCAACAGTAAAGGAAGGCAGGTCCTGCCAGCGGGCGCCAAACAGCATCTCCCCATGCAGAGGAAGAAACACCTCCTTCTAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR TCA 90 bp GGCTTAACCATTCAAACACCGCATGACAACGAACCCAGTGGACTGTaGAACTCAGGCTGCAGGAGGGTGGCTTGTCAGCTGGTGAAGCCA +
Preference number: 1 (lower is better)
Translates to: GLTIQTPHDNEPSGL*NSGCRRVACQLVKP
Trigger: TGGCTTCACCAGCTGACAAGCCACCCTCCTGCAGCCTGAGTTTCACAGTCCACTGGGTTCGTTGTCATGCGGTGTTTGAATGGTTAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR GCA 90 bp TCTCCACTGTTTAGAAGGAGGTGTTTCTTCCTCTGCATGGGGAGATaGTGTTTGGCGCCCGCTGGCAGGACCTGCCTTCCTTTACTGTTG +
Preference number: 1 (lower is better)
Translates to: SPLFRRRCFFLCMGR*CLAPAGRTCLPLLL
Trigger: CAACAGTAAAGGAAGGCAGGTCCTGCCAGCGGGCGCCAAACAGCATCTCCCCATGCAGAGGAAGAAACACCTCCTTCTAAACAGTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR CCA 90 bp ACAGGGCATGATCCTGACAGCGACATCACAGCCTTCTTTTCCTGTTaGAAAGAAGACCACTGGGCCTCAGGAGCTGCTGTCCTGGTCACT +
Preference number: 1 (lower is better)
Translates to: TGHDPDSDITAFFSC*KEDHWASGAAVLVT
Trigger: AGTGACCAGGACAGCAGCTCCTGAGGCCCAGTGGTCTTCTTTCCAACAGGAAAAGAAGGCTGTGATGTCGCTGTCAGGATCATGCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR TCA 90 bp CCTTCTGCTAAAAATAGAGGAACCACCCCTGCAGCCACGAAATGCTaGGAGCAGCCGACCCGATTCACACTGTGCTGCTTTGTGTTAGGC +
Preference number: 1 (lower is better)
Translates to: PSAKNRGTTPAATKC*EQPTRFTLCCFVLG
Trigger: GCCTAACACAAAGCAGCACAGTGTGAATCGGGTCGGCTGCTCTCAGCATTTCGTGGCTGCAGGGGTGGTTCCTCTATTTTTAGCAGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR CCA 90 bp AGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGAATCCTaGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCC +
Preference number: 1 (lower is better)
Translates to: SIWNKGLGQSRGQES*GRCYILNWVLTLLS
Trigger: GGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR CCA 90 bp GACAGCGACATCACAGCCTTCTTTTCCTGTTGGAAAGAAGACCACTaGGCCTCAGGAGCTGCTGTCCTGGTCACTCTCAGCATCTGGAAT +
Preference number: 1 (lower is better)
Translates to: DSDITAFFSCWKEDH*ASGAAVLVTLSIWN
Trigger: ATTCCAGATGCTGAGAGTGACCAGGACAGCAGCTCCTGAGGCCCAGTGGTCTTCTTTCCAACAGGAAAAGAAGGCTGTGATGTCGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR GCA 90 bp GGTGCATTTACCTTTCTCCTGAAGATGGGAAGACACACGGATGCTTaGCTAAAATATCTGCCGAGAGGTGAGCAGCTGTGGCCTGGGAAG +
Preference number: 1 (lower is better)
Translates to: GAFTFLLKMGRHTDA*LKYLPRGEQLWPGK
Trigger: CTTCCCAGGCCACAGCTGCTCACCTCTCGGCAGATATTTTAGGCAAGCATCCGTGTGTCTTCCCATCTTCAGGAGAAAGGTAAATGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR GCA 90 bp GGGGAGAAGGCCAGAATGCATCTGCAATTCCAACAGGCATCGCTATaGTCTTCCTTGGTCTGTAAGGACTGGATGCCTGGAGTAGACTGT +
Preference number: 1 (lower is better)
Translates to: GEKARMHLQFQQASL*SSLVCKDWMPGVDC
Trigger: ACAGTCTACTCCAGGCATCCAGTCCTTACAGACCAAGGAAGAGCATAGCGATGCCTGTTGGAATTGCAGATGCATTCTGGCCTTCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR TCA 90 bp ACTTGGCTTTGGACTCCATCGGTCATCTTTACGCAAGAGCAGAGATaGACGGTGGGTCACGGCTATGACGTGAAGGAGAAAGAGAAGACA +
Preference number: 1 (lower is better)
Translates to: TWLWTPSVIFTQEQR*TVGHGYDVKEKEKT
Trigger: TGTCTTCTCTTTCTCCTTCACGTCATAGCCGTGACCCACCGTTCATCTCTGCTCTTGCGTAAAGATGACCGATGGAGTCCAAAGCCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR TCA 90 bp CAGGCTGGACATGTCCAGGGCGGGGAAACCCTGGATATTTCACTCTaGAGTGGTTTCTTGAAAGAAAACTCAACTGACTCAGGCCATGAG +
Preference number: 1 (lower is better)
Translates to: QAGHVQGGETLDISL*SGFLKENSTDSGHE
Trigger: CTCATGGCCTGAGTCAGTTGAGTTTTCTTTCAAGAAACCACTTCAGAGTGAAATATCCAGGGTTTCCCCGCCCTGGACATGTCCAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR GCA 90 bp GCCTTCCTCAAAGAAAATGTTTCAGGACGGGGGAGAAGGCCAGAATaGATCTGCAATTCCAACAGGCATCGCTATGCTCTTCCTTGGTCT +
Preference number: 1 (lower is better)
Translates to: AFLKENVSGRGRRPE*ICNSNRHRYALPWS
Trigger: AGACCAAGGAAGAGCATAGCGATGCCTGTTGGAATTGCAGATGCATTCTGGCCTTCTCCCCCGTCCTGAAACATTTTCTTTGAGGAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR CCA 90 bp GCCAGAAGGCAGATCACACCTTCAGAGCACCCTACAGAACCCAGATaGCGAATCAAAGTGCAGAAAAAGAACACCCGCTTCCTCATTAGT +
Preference number: 1 (lower is better)
Translates to: ARRQITPSEHPTEPR*RIKVQKKNTRFLIS
Trigger: ACTAATGAGGAAGCGGGTGTTCTTTTTCTGCACTTTGATTCGCCATCTGGGTTCTGTAGGGTGCTCTGAAGGTGTGATCTGCCTTCTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR CCA 90 bp TGTGGCCGTTTCATCCAGGAGCTGGTAGAGCCACTTCCACTGGAATaGAACAGCGAGTTTGAGGAGAAATGCAATGATCCTAGTGAAGTA +
Preference number: 1 (lower is better)
Translates to: CGRFIQELVEPLPLE*NSEFEEKCNDPSEV
Trigger: TACTTCACTAGGATCATTGCATTTCTCCTCAAACTCGCTGTTCCATTCCAGTGGAAGTGGCTCTACCAGCTCCTGGATGAAACGGCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR TCA 90 bp GTCCCTCTGAGGGAAGGACTGAGGAGGGCTTTGGTAGTCACAGATTaGGACACATTTCTGCGAAAACTGGTATTATGTTTCTGCACAGGA +
Preference number: 1 (lower is better)
Translates to: VPLREGLRRALVVTD*DTFLRKLVLCFCTG
Trigger: TCCTGTGCAGAAACATAATACCAGTTTTCGCAGAAATGTGTCTCAATCTGTGACTACCAAAGCCCTCCTCAGTCCTTCCCTCAGAGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR TCA 90 bp CGTGAACTGGCCACGTATATTCCTAAGTTCTTGCCACTGAGTTCTTaGAAGCAGGCTCCAATGATGCTTAGTGGAACGGCAAGTTCCATC +
Preference number: 1 (lower is better)
Translates to: RELATYIPKFLPLSS*KQAPMMLSGTASSI
Trigger: GATGGAACTTGCCGTTCCACTAAGCATCATTGGAGCCTGCTTTCAAGAACTCAGTGGCAAGAACTTAGGAATATACGTGGCCAGTTCACG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR CCA 90 bp CAATTCCAACAGGCATCGCTATGCTCTTCCTTGGTCTGTAAGGACTaGATGCCTGGAGTAGACTGTTTTAAGTACCAAAACAAGACACCC +
Preference number: 1 (lower is better)
Translates to: QFQQASLCSSLVCKD*MPGVDCFKYQNKTP
Trigger: GGGTGTCTTGTTTTGGTACTTAAAACAGTCTACTCCAGGCATCCAGTCCTTACAGACCAAGGAAGAGCATAGCGATGCCTGTTGGAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR TCA 90 bp CAGTGCTACTTAAATTTTAAAGCACTGAGGGACCAAGAAATGGGCTaGTCAAGTCCTTGGCCACTCACTGTTAAGAGCCAGGATTTACAG +
Preference number: 1 (lower is better)
Translates to: QCYLNFKALRDQEMG*SSPWPLTVKSQDLQ
Trigger: CTGTAAATCCTGGCTCTTAACAGTGAGTGGCCAAGGACTTGATCAGCCCATTTCTTGGTCCCTCAGTGCTTTAAAATTTAAGTAGCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR TCA 90 bp TTGAAAGAAAACTCAACTGACTCAGGCCATGAGCATCTTTTACACTaGAGCAAGCATCTCCTCACAAGTGCCTCCTACAAGTCACTAGAG +
Preference number: 1 (lower is better)
Translates to: LKENSTDSGHEHLLH*SKHLLTSASYKSLE
Trigger: CTCTAGTGACTTGTAGGAGGCACTTGTGAGGAGATGCTTGCTTCAGTGTAAAAGATGCTCATGGCCTGAGTCAGTTGAGTTTTCTTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR GCA 90 bp CTTGAAGCCTTTTACCAGTTACAATACAGACATGGCCAGATGACCTaGTTGTTAGGAAGGCTGTGGCCATCTTTGTTTCTGAAACAGTCT +
Preference number: 1 (lower is better)
Translates to: LEAFYQLQYRHGQMT*LLGRLWPSLFLKQS
Trigger: AGACTGTTTCAGAAACAAAGATGGCCACAGCCTTCCTAACAAGCAGGTCATCTGGCCATGTCTGTATTGTAACTGGTAAAAGGCTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR CCA 90 bp TTACAATACAGACATGGCCAGATGACCTGCTTGTTAGGAAGGCTGTaGCCATCTTTGTTTCTGAAACAGTCTTATCTCATCTGTCCACTG +
Preference number: 1 (lower is better)
Translates to: LQYRHGQMTCLLGRL*PSLFLKQSYLICPL
Trigger: CAGTGGACAGATGAGATAAGACTGTTTCAGAAACAAAGATGGCCACAGCCTTCCTAACAAGCAGGTCATCTGGCCATGTCTGTATTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR GCA 90 bp ACTGAAAACTCCTTCTGCATCCCAATCTCTAACCAGGAAAGCAAATaGTATTTACAGACCTGCAAGCCCTCCCTCAAACGAAACTATTTC +
Preference number: 1 (lower is better)
Translates to: TENSFCIPISNQESK*YLQTCKPSLKRNYF
Trigger: GAAATAGTTTCGTTTGAGGGAGGGCTTGCAGGTCTGTAAATAGCATTTGCTTTCCTGGTTAGAGATTGGGATGCAGAAGGAGTTTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR TCA 90 bp TTGTGCTGTGAAAAGCCACGCAGTTATCTGACGATAGAGGATGTCTaGGGATCATTAGCAGACTTAGAGATGACTCAGAAGATTCCATTT +
Preference number: 1 (lower is better)
Translates to: LCCEKPRSYLTIEDV*GSLADLEMTQKIPF
Trigger: AAATGGAATCTTCTGAGTCATCTCTAAGTCTGCTAATGATCCTCAGACATCCTCTATCGTCAGATAACTGCGTGGCTTTTCACAGCACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR GCA 90 bp GTAGAGCCACTTCCACTGGAATGGAACAGCGAGTTTGAGGAGAAATaGAATGATCCTAGTGAAGTATATGTAACACACAATCAAGACGTA +
Preference number: 1 (lower is better)
Translates to: VEPLPLEWNSEFEEK*NDPSEVYVTHNQDV
Trigger: TACGTCTTGATTGTGTGTTACATATACTTCACTAGGATCATTGCATTTCTCCTCAAACTCGCTGTTCCATTCCAGTGGAAGTGGCTCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR TCA 90 bp CTGTGTTCATTCAAGCTCTGGAAGTGTGGAAGGGAACTTAATCATTaGGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTG +
Preference number: 1 (lower is better)
Translates to: LCSFKLWKCGRELNH*VSVKYFAILKSLRV
Trigger: CACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACTCAATGATTAAGTTCCCTTCCACACTTCCAGAGCTTGAATGAACACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR TCA 90 bp AGATTTCTCAGAGGAAACATGGATATTTTGCGTAGGCAGAAACAGTaGGGAGTACAAAGCAAAGCTATAAATACCACCAATGGTTCTGCT +
Preference number: 1 (lower is better)
Translates to: RFLRGNMDILRRQKQ*GVQSKAINTTNGSA
Trigger: AGCAGAACCATTGGTGGTATTTATAGCTTTGCTTTGTACTCCTCACTGTTTCTGCCTACGCAAAATATCCATGTTTCCTCTGAGAAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR CCA 90 bp AGTGAAACTGTTGAATCATGCTCACTTTCTTCACATACATACTCTTaGACTATGGGGACCAAGTCTGTTGAATTCATCTATTTAGAAATC +
Preference number: 1 (lower is better)
Translates to: SETVESCSLSSHTYS*TMGTKSVEFIYLEI
Trigger: GATTTCTAAATAGATGAATTCAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGAGCATGATTCAACAGTTTCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp ACCCACACGAGGTGGACTTACAGGGCTGTGTGCTGCCTGGGCAGGCTGGACATGACGCTGGCGTTCCCGTaGCAGTCTGAGGGCTGCGGC +
Preference number: 2 (lower is better)
Translates to: THTRWTYRAVCCLGRLDMTLAFP*QSEGCG
Trigger: GCCGCAGCCCTCAGACTGGCACGGGAACGCCAGCGT...CATGTCCAGCCTGCCCAGGCAGCACACAGCCCTGTAAGTCCACCTCGTGTGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp CCCACCTGCAGACACCCTGCTGCCAGAACTCCAACAGGTCCCCGAGGTAGCGAGGTTTCCGCGGCACTGTaGTCCAGCCATGTGCCCTGG +
Preference number: 2 (lower is better)
Translates to: PTCRHPAARTPTGPRGSEVSAAL*SSHVPW
Trigger: CCAGGGCACATGGCTGGAGCACAGTGCCGCGGAAAC...CTCGCTACCTCGGGGACCTGTTGGAGTTCTGGCAGCAGGGTGTCTGCAGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp CCCACCTGCAGACACCCTGCTGCCAGAACTCCAACAGGTCCCCGAGGTAGCGAGTGCACCATCTCAGTGTaGTCCCTCACACAGGGCCTG +
Preference number: 2 (lower is better)
Translates to: PTCRHPAARTPTGPRGSECTISV*SLTQGL
Trigger: CAGGCCCTGTGTGAGGGAGCACACTGAGATGGTGCA...CTCGCTACCTCGGGGACCTGTTGGAGTTCTGGCAGCAGGGTGTCTGCAGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CCA 90 bp ACCCACACGAGGTGGACTTACAGGGCTGTGTGCTGCCTGGGCAGGCTGGACATGCTGAACACCCAACGCTaGCGTTCCCGTGCCAGTCTG +
Preference number: 2 (lower is better)
Translates to: THTRWTYRAVCCLGRLDMLNTQR*RSRASL
Trigger: CAGACTGGCACGGGAACGCCAGCGTTGGGTGTTCAG...CATGTCCAGCCTGCCCAGGCAGCACACAGCCCTGTAAGTCCACCTCGTGTGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR TCA 90 bp CCCACCTGCAGACACCCTGCTGCCAGAACTCCAACAGGTCCCCGAGGTAGCGAGACCCAGCATGTGAAATaGGGACACCTCCACGGAGAC +
Preference number: 2 (lower is better)
Translates to: PTCRHPAARTPTGPRGSETQHVK*GHLHGD
Trigger: GTCTCCGTGGAGGTGTCCTCATTTCACATGCTGGGT...CTCGCTACCTCGGGGACCTGTTGGAGTTCTGGCAGCAGGGTGTCTGCAGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR TCA 90 bp CCCACCTGCAGACACCCTGCTGCCAGAACTCCAACAGGTCCCCGAGGTAGCGAGACGCAAGAGCAGAGATaGACGGTGGGTCACGGCTAT +
Preference number: 2 (lower is better)
Translates to: PTCRHPAARTPTGPRGSETQEQR*TVGHGY
Trigger: ATAGCCGTGACCCACCGTTCATCTCTGCTCTTGCGT...CTCGCTACCTCGGGGACCTGTTGGAGTTCTGGCAGCAGGGTGTCTGCAGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp ACCCACACGAGGTGGACTTACAGGGCTGTGTGCTGCCTGGGCAGGCTGGACATGGAAGCCAGACAGTGCTaGTCTGGGCTGTCAGGGAGT +
Preference number: 2 (lower is better)
Translates to: THTRWTYRAVCCLGRLDMEARQC*SGLSGS
Trigger: ACTCCCTGACAGCCCAGAGCAGCACTGTCTGGCTTC...CATGTCCAGCCTGCCCAGGCAGCACACAGCCCTGTAAGTCCACCTCGTGTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp AACCACGCAGAGAGGCTCAGATGCATCGCTGGGCTACAGAAGTGGCCTCTGGGGACTTACAGGGCTGTGTaGTGCCTGGGCAGGCTGGAC +
Preference number: 2 (lower is better)
Translates to: NHAERLRCIAGLQKWPLGTYRAV*CLGRLD
Trigger: GTCCAGCCTGCCCAGGCAGCACACAGCCCTGTAAGT...CCCCAGAGGCCACTTCTGTAGCCCAGCGATGCATCTGAGCCTCTCTGCGTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp GCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTCTGGGCCTCAGGAGCTaGTGTCCTGGTCACTCTCAG +
Preference number: 2 (lower is better)
Translates to: AALGCQGVDVQATPQDNALGLRS*CPGHSQ
Trigger: CTGAGAGTGACCAGGACAGCAGCTCCTGAGGCCCAG...AGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR-3UTR CCA 90 bp ACCCACACGAGGTGGACTTACAGGGCTGTGTGCTGCCTGGGCAGGCTGGACATGCAGGAGCTGCTGTCCTaGTCACTCTCAGCATCTGGA +
Preference number: 2 (lower is better)
Translates to: THTRWTYRAVCCLGRLDMQELLS*SLSASG
Trigger: TCCAGATGCTGAGAGTGACCAGGACAGCAGCTCCTG...CATGTCCAGCCTGCCCAGGCAGCACACAGCCCTGTAAGTCCACCTCGTGTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CCA 90 bp AACCACGCAGAGAGGCTCAGATGCATCGCTGGGCTACAGAAGTGGCCTCTGGGGTGTCCACTGCTGCTCTaGAAGGGTCAGGACCAGCAC +
Preference number: 2 (lower is better)
Translates to: NHAERLRCIAGLQKWPLGCPLLL*KGQDQH
Trigger: GTGCTGGTCCTGACCCTTCCAGAGCAGCAGTGGACA...CCCCAGAGGCCACTTCTGTAGCCCAGCGATGCATCTGAGCCTCTCTGCGTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp CCCACCTGCAGACACCCTGCTGCCAGAACTCCAACAGGTCCCCGAGGTAGCGAGGTTCACTGTAGGAGCTaGTCCTGCTGTCCAATAGGA +
Preference number: 2 (lower is better)
Translates to: PTCRHPAARTPTGPRGSEVHCRS*SCCPIG
Trigger: TCCTATTGGACAGCAGGAGCAGCTCCTACAGTGAAC...CTCGCTACCTCGGGGACCTGTTGGAGTTCTGGCAGCAGGGTGTCTGCAGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp AACCACGCAGAGAGGCTCAGATGCATCGCTGGGCTACAGAAGTGGCCTCTGGGGTCCACCAGCCGTCCTTaGTACACTTCCCCACACATG +
Preference number: 2 (lower is better)
Translates to: NHAERLRCIAGLQKWPLGSTSRP*YTSPHM
Trigger: CATGTGTGGGGAAGTGTAGCAAGGACGGCTGGTGGA...CCCCAGAGGCCACTTCTGTAGCCCAGCGATGCATCTGAGCCTCTCTGCGTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp CCCACCTGCAGACACCCTGCTGCCAGAACTCCAACAGGTCCCCGAGGTAGCGAGGAATCCTGGGGCAGGTaGTACATCCTAAACTGGGTT +
Preference number: 2 (lower is better)
Translates to: PTCRHPAARTPTGPRGSEESWGR*YILNWV
Trigger: AACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTC...CTCGCTACCTCGGGGACCTGTTGGAGTTCTGGCAGCAGGGTGTCTGCAGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp TGCGACCCGGCCGCTCGGCTTCTAGCTGCCTACCCAAAGAACCCCGTGTTATGCAGCCATATTCAGTCGTaGCCTCCTCGGTGGACTCTA +
Preference number: 2 (lower is better)
Translates to: CDPAARLLAAYPKNPVLCSHIQS*PPRWTL
Trigger: TAGAGTCCACCGAGGAGGGCACGACTGAATATGGCT...GCATAACACGGGGTTCTTTGGGTAGGCAGCTAGAAGCCGAGCGGCCGGGTCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR GCA 90 bp TGCGACCCGGCCGCTCGGCTTCTAGCTGCCTACCCAAAGAACCCCGTGTTATGCGCCTTCCTTTACTGTTaGCGTGGAGCTGAGCAGAGA +
Preference number: 2 (lower is better)
Translates to: CDPAARLLAAYPKNPVLCAFLYC*RGAEQR
Trigger: TCTCTGCTCAGCTCCACGGCAACAGTAAAGGAAGGC...GCATAACACGGGGTTCTTTGGGTAGGCAGCTAGAAGCCGAGCGGCCGGGTCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR GCA 90 bp CCCATTACGACTGTGGAGTACAATGCAGTAAAGGAGACGATGCTGCGACCCGGCCTCTGCATGGGGAGATaGTGTTTGGCGCCCGCTGGC +
Preference number: 2 (lower is better)
Translates to: PITTVEYNAVKETMLRPGLCMGR*CLAPAG
Trigger: GCCAGCGGGCGCCAAACAGCATCTCCCCATGCAGAG...GCCGGGTCGCAGCATCGTCTCCTTTACTGCATTGTACTCCACAGTCGTAATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR CCA 90 bp CTGCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGTCCAGCCATGTGCCCTaGTGTCACTGTCGGTGGTGC +
Preference number: 2 (lower is better)
Translates to: LLSWSLSASGIRVWGKAESSHVP*CHCRWC
Trigger: GCACCACCGACAGTGACACCAGGGCACATGGCTGGA...CTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR-3UTR CCA 90 bp ACCTCCCACCACCTGTGCTGTGCCACAGGGCATGATCCTGACAGCGACATCACATCTGGAATAAGGGTCTaGGGCAAAGCCGAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: TSHHLCCATGHDPDSDITSGIRV*GKAEGR
Trigger: CCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGA...TGTGATGTCGCTGTCAGGATCATGCCCTGTGGCACAGCACAGGTGGTGGGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR-3UTR CCA 90 bp CCCACCTGCAGACACCCTGCTGCCAGAACTCCAACAGGTCCCCGAGGTAGCGAGGCCTTCTTTTCCTGTTaGAAAGAAGACCACTGGGCC +
Preference number: 2 (lower is better)
Translates to: PTCRHPAARTPTGPRGSEAFFSC*KEDHWA
Trigger: GGCCCAGTGGTCTTCTTTCCAACAGGAAAAGAAGGC...CTCGCTACCTCGGGGACCTGTTGGAGTTCTGGCAGCAGGGTGTCTGCAGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CCA 90 bp CTAGCTGCCTACCCAAAGAACCCCGTGTTATGCGGACGGACCAAGCCAAAGGCTCCAGATCAGACAGCCTaGGGCTCCAGTGTCCGCTTC +
Preference number: 2 (lower is better)
Translates to: LAAYPKNPVLCGRTKPKAPDQTA*GSSVRF
Trigger: GAAGCGGACACTGGAGCCCCAGGCTGTCTGATCTGG...AGCCTTTGGCTTGGTCCGTCCGCATAACACGGGGTTCTTTGGGTAGGCAGCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR CAA 90 bp ACACGCCTGCCTCTCTCTAGTTCCTCCACTGCCTGGCTTCCTCGCTaGCAAAACCCAGCATGTGAAATGAGGACACCTCCACGGAGACCC +
Preference number: 2 (lower is better)
Translates to: TRLPLSSSSTAWLPR*QNPACEMRTPPRRP
Trigger: GGGTCTCCGTGGAGGTGTCCTCATTTCACATGCTGGGTTTTGCAAGCGAGGAAGCCAGGCAGTGGAGGAACTAGAGAGAGGCAGGCGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR TCA 90 bp AACCACGCAGAGAGGCTCAGATGCATCGCTGGGCTACAGAAGTGGCCTCTGGGGACAAAGCCACAAGCATaGAGGGAAGCCAGACAGTGC +
Preference number: 2 (lower is better)
Translates to: NHAERLRCIAGLQKWPLGTKPQA*REARQC
Trigger: GCACTGTCTGGCTTCCCTTCATGCTTGTGGCTTTGT...CCCCAGAGGCCACTTCTGTAGCCCAGCGATGCATCTGAGCCTCTCTGCGTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp GCGATGAGGTCATCACGCAGGAGGAAATCTCACCCACACGAGGTGGACTTACAGCTGGGCCTCAGGAGCTaGTGTCCTGGTCACTCTCAG +
Preference number: 2 (lower is better)
Translates to: AMRSSRRRKSHPHEVDLQLGLRS*CPGHSQ
Trigger: CTGAGAGTGACCAGGACAGCAGCTCCTGAGGCCCAG...CTGTAAGTCCACCTCGTGTGGGTGAGATTTCCTCCTGCGTGATGACCTCATCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CCA 90 bp CACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTTCGTTCTTGCCAAGAGAGGTGAGCAGCTGTaGCCTGGGAAGGCGCTTGCT +
Preference number: 2 (lower is better)
Translates to: HGDPSEQGGFITPFVLAKRGEQL*PGKALA
Trigger: AGCAAGCGCCTTCCCAGGCCACAGCTGCTCACCTCT...CTTGGCAAGAACGAAAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CCA 90 bp TTCCTCTGCATGGGGAGATGCTGTTTGGCGCCCGCTGGCAGGACCTGCCTTCCTCAAAGAAGACCAGTGTaGCCGTTTCATCCAGGAGCT +
Preference number: 2 (lower is better)
Translates to: FLCMGRCCLAPAGRTCLPQRRPV*PFHPGA
Trigger: AGCTCCTGGATGAAACGGCCACACTGGTCTTCTTTG...AGGAAGGCAGGTCCTGCCAGCGGGCGCCAAACAGCATCTCCCCATGCAGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR CAA 90 bp GACAGCCAAGCAGAGCTTAGCATGGGCCGAGTCTCAGCCTCTGAATaGGGAAGAATTCAAAGGCTGCCAGGGCTGGGGGCAGAACACTTG +
Preference number: 2 (lower is better)
Translates to: DSQAELSMGRVSASE*GRIQRLPGLGAEHL
Trigger: CAAGTGTTCTGCCCCCAGCCCTGGCAGCCTTTGAATTCTTCCCAATTCAGAGGCTGAGACTCGGCCCATGCTAAGCTCTGCTTGGCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR CAA 90 bp CTGTTTAGAAGGAGGTGTTTCTTCCTCTGCATGGGGAGATGCTGTTaGGCGCCCGCTGGCAGGACCTGCCTTCCTTTACTGTTGCCGTGG +
Preference number: 2 (lower is better)
Translates to: LFRRRCFFLCMGRCC*APAGRTCLPLLLPW
Trigger: CCACGGCAACAGTAAAGGAAGGCAGGTCCTGCCAGCGGGCGCCAAACAGCATCTCCCCATGCAGAGGAAGAAACACCTCCTTCTAAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR TCA 90 bp CCGTCCTTGCTACACTTCCCCACACATGGGGTCACAACTGCATACACCTTAGAGCCTCCCATTCCCGCCTaGAAGAGGATCCAGCTGCCT +
Preference number: 2 (lower is better)
Translates to: PSLLHFPTHGVTTAYTLEPPIPA*KRIQLP
Trigger: AGGCAGCTGGATCCTCTTTCAGGCGGGAATGGGAGG...CTCTAAGGTGTATGCAGTTGTGACCCCATGTGTGGGGAAGTGTAGCAAGGACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR-3UTR GCA 90 bp CTGCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGAGTTTCCTTGGACAGTaGCATCCTCAGGGTCGGCTC +
Preference number: 2 (lower is better)
Translates to: LLSWSLSASGIRVWGKAESFLGQ*HPQGRL
Trigger: GAGCCGACCCTGAGGATGGCACTGTCCAAGGAAACT...CTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR-3UTR GCA 90 bp TTGCCAAGGAGTCTATCGCCTCATCCACAACATCTGCTTGCGGGAGAAACAGCAGTTTCCGCGGCACTGTaGTCCAGCCATGTGCCCTGG +
Preference number: 2 (lower is better)
Translates to: LPRSLSPHPQHLLAGETAVSAAL*SSHVPW
Trigger: CCAGGGCACATGGCTGGAGCACAGTGCCGCGGAAAC...TGCTGTTTCTCCCGCAAGCAGATGTTGTGGATGAGGCGATAGACTCCTTGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp AACCACGCAGAGAGGCTCAGATGCATCGCTGGGCTACAGAAGTGGCCTCTGGGGGAATCCTGGGGCAGGTaGTACATCCTAAACTGGGTT +
Preference number: 2 (lower is better)
Translates to: NHAERLRCIAGLQKWPLGESWGR*YILNWV
Trigger: AACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTC...CCCCAGAGGCCACTTCTGTAGCCCAGCGATGCATCTGAGCCTCTCTGCGTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp AACCACGCAGAGAGGCTCAGATGCATCGCTGGGCTACAGAAGTGGCCTCTGGGGCACACCTTTCGTTCTTaGCAAGGAGTCTATCGCCTC +
Preference number: 2 (lower is better)
Translates to: NHAERLRCIAGLQKWPLGHTFRS*QGVYRL
Trigger: GAGGCGATAGACTCCTTGGCAAGAACGAAAGGTGTG...CCCCAGAGGCCACTTCTGTAGCCCAGCGATGCATCTGAGCCTCTCTGCGTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp AACCACGCAGAGAGGCTCAGATGCATCGCTGGGCTACAGAAGTGGCCTCTGGGGGGAGTATGTTCAGCCTaGCGACCGATAACTACGTTC +
Preference number: 2 (lower is better)
Translates to: NHAERLRCIAGLQKWPLGGVCSA*RPITTF
Trigger: GAACGTAGTTATCGGTCGGCAGGCTGAACATACTCC...CCCCAGAGGCCACTTCTGTAGCCCAGCGATGCATCTGAGCCTCTCTGCGTGGTT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CCA 90 bp AGTAGACATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCTCCAGCCATGTGCCCTaGTGTCACTGTCGGTGGTGC +
Preference number: 2 (lower is better)
Translates to: SRHFLKHQTDTSHPPSPSSSHVP*CHCRWC
Trigger: GCACCACCGACAGTGACACCAGGGCACATGGCTGGA...GGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATGTCTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR-3UTR CCA 90 bp CTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTCAGGAGCTGCTGTCCTaGTCACTCTCAGCATCTGGA +
Preference number: 2 (lower is better)
Translates to: LLWAVREWMSRQRHRIMLQELLS*SLSASG
Trigger: TCCAGATGCTGAGAGTGACCAGGACAGCAGCTCCTG...AAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR-3UTR CCA 90 bp AACCACGCAGAGAGGCTCAGATGCATCGCTGGGCTACAGAAGTGGCCTCTGGGGAGGGCGGGGAAACCCTaGATATTTCACTCTGAAGTG +
Preference number: 2 (lower is better)
Translates to: NHAERLRCIAGLQKWPLGRAGKP*IFHSEV
Trigger: CACTTCAGAGTGAAATATCCAGGGTTTCCCCGCCCT...CCCCAGAGGCCACTTCTGTAGCCCAGCGATGCATCTGAGCCTCTCTGCGTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CCA 90 bp CTAGCTGCCTACCCAAAGAACCCCGTGTTATGCGGACGGACCAAGCCAAAGGCTAAGCAGAGCTTAGCATaGGCCGAGTCTCAGCCTCTG +
Preference number: 2 (lower is better)
Translates to: LAAYPKNPVLCGRTKPKAKQSLA*AESQPL
Trigger: CAGAGGCTGAGACTCGGCCCATGCTAAGCTCTGCTT...AGCCTTTGGCTTGGTCCGTCCGCATAACACGGGGTTCTTTGGGTAGGCAGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR CCA 90 bp TGTGCCTCTTCAACCAACAGACACTTGCTCAGATCCTGCCACTTCTGGGAAAGGTGGGGAGATGCTGTTTaGCGCCCGCTGGCAGGACCT +
Preference number: 2 (lower is better)
Translates to: CASSTNRHLLRSCHFWERWGDAV*RPLAGP
Trigger: AGGTCCTGCCAGCGGGCGCCAAACAGCATCTCCCCA...CCTTTCCCAGAAGTGGCAGGATCTGAGCAAGTGTCTGTTGGTTGAAGAGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR TCA 90 bp TTTTTGTCTCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCCCTCCCATTCCCGCCTaGAAGAGGATCCAGCTGCCT +
Preference number: 2 (lower is better)
Translates to: FLSPKQAMALSPPFFLSPPPIPA*KRIQLP
Trigger: AGGCAGCTGGATCCTCTTTCAGGCGGGAATGGGAGG...GGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGAGACAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR-3UTR TCA 90 bp CTTCATAATGCATCCAGGCTCCAAGATGTAACGGCTGAGGGAAAGGATGTGGGACTGTCCCATGCTGCCTaGCCCGCTGACAGCCAAGCA +
Preference number: 2 (lower is better)
Translates to: LHNASRLQDVTAEGKDVGLSHAA*PADSQA
Trigger: TGCTTGGCTGTCAGCGGGTCAGGCAGCATGGGACAG...TCCCACATCCTTTCCCTCAGCCGTTACATCTTGGAGCCTGGATGCATTATGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR GCA 90 bp AGTAGACATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCTGTGCTCCAGCCATGTaGCCTGGTGTCACTGTCGGT +
Preference number: 2 (lower is better)
Translates to: SRHFLKHQTDTSHPPSPSCAPAM*PGVTVG
Trigger: ACCGACAGTGACACCAGGGCACATGGCTGGAGCACA...GGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATGTCTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR-3UTR GCA 90 bp GCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGACATGGGGTCACAACTaGATACACCTTAGAGCTCCG +
Preference number: 2 (lower is better)
Translates to: AVLVTLSIWNKGLGQSRGTWGHN*IHLRAP
Trigger: CGGAGCTCTAAGGTGTATGCAGTTGTGACCCCATGT...CCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR-3UTR GCA 90 bp GCGATGAGGTCATCACGCAGGAGGAAATCTCACCCACACGAGGTGGACTTACAGGTCCACACACACGCCTaGCTCTCTCTAGTTCCTCCA +
Preference number: 2 (lower is better)
Translates to: AMRSSRRRKSHPHEVDLQVHTHA*LSLVPP
Trigger: TGGAGGAACTAGAGAGAGGCAGGCGTGTGTGTGGAC...CTGTAAGTCCACCTCGTGTGGGTGAGATTTCCTCCTGCGTGATGACCTCATCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CCA 90 bp TTTTTGTCTCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCTCCAGCCATGTGCCCTaGTGTCACTGTCGGTGGTGC +
Preference number: 2 (lower is better)
Translates to: FLSPKQAMALSPPFFLSPSSHVP*CHCRWC
Trigger: GCACCACCGACAGTGACACCAGGGCACATGGCTGGA...GGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGAGACAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR-3UTR CCA 90 bp TTGCCAAGGAGTCTATCGCCTCATCCACAACATCTGCTTGCGGGAGAAACAGCATCCAGCCATGTGCCCTaGTGTCACTGTCGGTGGTGC +
Preference number: 2 (lower is better)
Translates to: LPRSLSPHPQHLLAGETASSHVP*CHCRWC
Trigger: GCACCACCGACAGTGACACCAGGGCACATGGCTGGA...TGCTGTTTCTCCCGCAAGCAGATGTTGTGGATGAGGCGATAGACTCCTTGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CCA 90 bp CCCAGAATGAGCCTATGTGGGATCAATAGGCACGGGGAGAAAGATGGCAGAGAACTGAACACCCAACGCTaGCGTTCCCGTGCCAGTCTG +
Preference number: 2 (lower is better)
Translates to: PRMSLCGINRHGEKDGRELNTQR*RSRASL
Trigger: CAGACTGGCACGGGAACGCCAGCGTTGGGTGTTCAG...TTCTCTGCCATCTTTCTCCCCGTGCCTATTGATCCCACATAGGCTCATTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CCA 90 bp GCGATGAGGTCATCACGCAGGAGGAAATCTCACCCACACGAGGTGGACTTACAGGCCCAGACATACGCGTaGAATCTGAACACCCAACGC +
Preference number: 2 (lower is better)
Translates to: AMRSSRRRKSHPHEVDLQAQTYA*NLNTQR
Trigger: GCGTTGGGTGTTCAGATTCCACGCGTATGTCTGGGC...CTGTAAGTCCACCTCGTGTGGGTGAGATTTCCTCCTGCGTGATGACCTCATCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CCA 90 bp ACCCACACGAGGTGGACTTACAGGGCTGTGTGCTGCCTGGGCAGGCTGGACATGCTGCTTTCCCAATCTTaGGCTGGGGTTTTGACTTTT +
Preference number: 2 (lower is better)
Translates to: THTRWTYRAVCCLGRLDMLLSQS*AGVLTF
Trigger: AAAAGTCAAAACCCCAGCCCAAGATTGGGAAAGCAG...CATGTCCAGCCTGCCCAGGCAGCACACAGCCCTGTAAGTCCACCTCGTGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CCA 90 bp TTCCTCTGCATGGGGAGATGCTGTTTGGCGCCCGCTGGCAGGACCTGCCTTCCTACATTTGCCAGGACCTaGAGTGGAATGACAATCATG +
Preference number: 2 (lower is better)
Translates to: FLCMGRCCLAPAGRTCLPTFART*SGMTIM
Trigger: CATGATTGTCATTCCACTCCAGGTCCTGGCAAATGT...AGGAAGGCAGGTCCTGCCAGCGGGCGCCAAACAGCATCTCCCCATGCAGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR CCA 90 bp TTCCTCTGCATGGGGAGATGCTGTTTGGCGCCCGCTGGCAGGACCTGCCTTCCTTTCTCCCTCGTGAACTaGCCACGTATATTCCTAAGT +
Preference number: 2 (lower is better)
Translates to: FLCMGRCCLAPAGRTCLPFSLVN*PRIFLS
Trigger: ACTTAGGAATATACGTGGCCAGTTCACGAGGGAGAA...AGGAAGGCAGGTCCTGCCAGCGGGCGCCAAACAGCATCTCCCCATGCAGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR CAA 90 bp ACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTTCGTTCTaGCCAAGGAGTCTATCGCCTCATCCACAACATCTGCTTGCGGGA +
Preference number: 2 (lower is better)
Translates to: TETLPSREVSSHLSF*PRSLSPHPQHLLAG
Trigger: TCCCGCAAGCAGATGTTGTGGATGAGGCGATAGACTCCTTGGCAAGAACGAAAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR TCA 90 bp GCGATGAGGTCATCACGCAGGAGGAAATCTCACCCACACGAGGTGGACTTACAGGACCAAGAAATGGGCTaGTCAAGTCCTTGGCCACTC +
Preference number: 2 (lower is better)
Translates to: AMRSSRRRKSHPHEVDLQDQEMG*SSPWPL
Trigger: GAGTGGCCAAGGACTTGATCAGCCCATTTCTTGGTC...CTGTAAGTCCACCTCGTGTGGGTGAGATTTCCTCCTGCGTGATGACCTCATCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp TTTTTGTCTCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCTGTGCTCCAGCCATGTaGCCTGGTGTCACTGTCGGT +
Preference number: 2 (lower is better)
Translates to: FLSPKQAMALSPPFFLSPCAPAM*PGVTVG
Trigger: ACCGACAGTGACACCAGGGCACATGGCTGGAGCACA...GGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGAGACAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR-3UTR GCA 90 bp GGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAGTTTCCGCGGCACTGTaGTCCAGCCATGTGCCCTGG +
Preference number: 2 (lower is better)
Translates to: GILGQVLHPKLGFDFAFQVSAAL*SSHVPW
Trigger: CCAGGGCACATGGCTGGAGCACAGTGCCGCGGAAAC...TTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR-3UTR GCA 90 bp TCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCGTTTCCGCGGCACTGTaGTCCAGCCATGTGCCCTGG +
Preference number: 2 (lower is better)
Translates to: SWGRCYILNWVLTLLSKVVSAAL*SSHVPW
Trigger: CCAGGGCACATGGCTGGAGCACAGTGCCGCGGAAAC...GACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR-3UTR CCA 90 bp TTGCCAAGGAGTCTATCGCCTCATCCACAACATCTGCTTGCGGGAGAAACAGCACTCCCAAACAGGCAATaGCACTCTCCCCGCCCTTCT +
Preference number: 2 (lower is better)
Translates to: LPRSLSPHPQHLLAGETALPNRQ*HSPRPS
Trigger: AGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGAG...TGCTGTTTCTCCCGCAAGCAGATGTTGTGGATGAGGCGATAGACTCCTTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CCA 90 bp CTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTGTCACTCTCAGCATCTaGAATAAGGGTCTGGGGCAA +
Preference number: 2 (lower is better)
Translates to: LLWAVREWMSRQRHRIMLVTLSI*NKGLGQ
Trigger: TTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGAC...AAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR-3UTR CCA 90 bp CACTTGGCTTTGGACTCCATCGGTCATCTTTACGCAAGAGCAGAGATGAACGGTTGGGCTGTCAGGGAGTaGATGTCCAGGCAACGCCAC +
Preference number: 2 (lower is better)
Translates to: HLALDSIGHLYARAEMNGWAVRE*MSRQRH
Trigger: GTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCA...ACCGTTCATCTCTGCTCTTGCGTAAAGATGACCGATGGAGTCCAAAGCCAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CCA 90 bp CCCAGAATGAGCCTATGTGGGATCAATAGGCACGGGGAGAAAGATGGCAGAGAATGTCCACTGCTGCTCTaGAAGGGTCAGGACCAGCAC +
Preference number: 2 (lower is better)
Translates to: PRMSLCGINRHGEKDGRECPLLL*KGQDQH
Trigger: GTGCTGGTCCTGACCCTTCCAGAGCAGCAGTGGACA...TTCTCTGCCATCTTTCTCCCCGTGCCTATTGATCCCACATAGGCTCATTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CCA 90 bp CCCATTACGACTGTGGAGTACAATGCAGTAAAGGAGACGATGCTGCGACCCGGCCCACTGGGAAGAGGATaGCACCACAACACAACAGGT +
Preference number: 2 (lower is better)
Translates to: PITTVEYNAVKETMLRPGPLGRG*HHNTTG
Trigger: ACCTGTTGTGTTGTGGTGCCATCCTCTTCCCAGTGG...GCCGGGTCGCAGCATCGTCTCCTTTACTGCATTGTACTCCACAGTCGTAATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR TCA 90 bp CCCAGAATGAGCCTATGTGGGATCAATAGGCACGGGGAGAAAGATGGCAGAGAAACGCAAGAGCAGAGATaGACGGTGGGTCACGGCTAT +
Preference number: 2 (lower is better)
Translates to: PRMSLCGINRHGEKDGRETQEQR*TVGHGY
Trigger: ATAGCCGTGACCCACCGTTCATCTCTGCTCTTGCGT...TTCTCTGCCATCTTTCTCCCCGTGCCTATTGATCCCACATAGGCTCATTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp TTTTTGTCTCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCAGTTTCCTTGGACAGTaGCATCCTCAGGGTCGGCTC +
Preference number: 2 (lower is better)
Translates to: FLSPKQAMALSPPFFLSPSFLGQ*HPQGRL
Trigger: GAGCCGACCCTGAGGATGGCACTGTCCAAGGAAACT...GGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGAGACAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR-3UTR GCA 90 bp TGTTTCATTCTGACCATTCTGACTCTGCCCAGAACGCCGTCCCACCTGCAGACAATGCCCATTCACTCCTaGACCATCTCAGTGTGCTCC +
Preference number: 2 (lower is better)
Translates to: CFILTILTLPRTPSHLQTMPIHS*TISVCS
Trigger: GGAGCACACTGAGATGGTGCAGGAGTGAATGGGCAT...TGTCTGCAGGTGGGACGGCGTTCTGGGCAGAGTCAGAATGGTCAGAATGAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CCA 90 bp CACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTTCGTTCTTGCCAAGGTCACTCTCAGCATCTaGAATAAGGGTCTGGGGCAA +
Preference number: 2 (lower is better)
Translates to: HGDPSEQGGFITPFVLAKVTLSI*NKGLGQ
Trigger: TTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGAC...CTTGGCAAGAACGAAAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CCA 90 bp CACTTGGCTTTGGACTCCATCGGTCATCTTTACGCAAGAGCAGAGATGAACGGTCAGACAGTGCTGCTCTaGGCTGTCAGGGAGTGGATG +
Preference number: 2 (lower is better)
Translates to: HLALDSIGHLYARAEMNGQTVLL*AVREWM
Trigger: CATCCACTCCCTGACAGCCCAGAGCAGCACTGTCTG...ACCGTTCATCTCTGCTCTTGCGTAAAGATGACCGATGGAGTCCAAAGCCAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CCA 90 bp AATAGAGAGTCCTTCCACAAGCCATATTCAGTCGTGCCCTCCTCGGTGGACTCTTGTGTCTTCTGGGTCTaGTTGCCTGCTGAAGCAGGG +
Preference number: 2 (lower is better)
Translates to: NRESFHKPYSVVPSSVDSCVFWV*LPAEAG
Trigger: CCCTGCTTCAGCAGGCAACCAGACCCAGAAGACACA...AGAGTCCACCGAGGAGGGCACGACTGAATATGGCTTGTGGAAGGACTCTCTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR CCA 90 bp CCCATTACGACTGTGGAGTACAATGCAGTAAAGGAGACGATGCTGCGACCCGGCCCACTTCCACTGGAATaGAACAGCGAGTTTGAGGAG +
Preference number: 2 (lower is better)
Translates to: PITTVEYNAVKETMLRPGPLPLE*NSEFEE
Trigger: CTCCTCAAACTCGCTGTTCCATTCCAGTGGAAGTGG...GCCGGGTCGCAGCATCGTCTCCTTTACTGCATTGTACTCCACAGTCGTAATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR CAA 90 bp AGTGGAACGGCAAGTTCCATCTTCCCTGACAAGACCCAGCTAGGTTaGGCAGATACTGTACTTCAAACCAGATCAGACAGCCTGGGGCTC +
Preference number: 2 (lower is better)
Translates to: SGTASSIFPDKTQLG*ADTVLQTRSDSLGL
Trigger: GAGCCCCAGGCTGTCTGATCTGGTTTGAAGTACAGTATCTGCCAAACCTAGCTGGGTCTTGTCAGGGAAGATGGAACTTGCCGTTCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR TCA 90 bp GCGATGAGGTCATCACGCAGGAGGAAATCTCACCCACACGAGGTGGACTTACAGATTAAGAAGCTTCCCTaGTGGGGCCATGTTTTGGTC +
Preference number: 2 (lower is better)
Translates to: AMRSSRRRKSHPHEVDLQIKKLP*WGHVLV
Trigger: GACCAAAACATGGCCCCATCAGGGAAGCTTCTTAAT...CTGTAAGTCCACCTCGTGTGGGTGAGATTTCCTCCTGCGTGATGACCTCATCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR TCA 90 bp ACCCACACGAGGTGGACTTACAGGGCTGTGTGCTGCCTGGGCAGGCTGGACATGATCATCAATCTGACTTaGAGCCTTTTACCAGTTACA +
Preference number: 2 (lower is better)
Translates to: THTRWTYRAVCCLGRLDMIINLT*SLLPVT
Trigger: TGTAACTGGTAAAAGGCTTCAAGTCAGATTGATGAT...CATGTCCAGCCTGCCCAGGCAGCACACAGCCCTGTAAGTCCACCTCGTGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR TCA 90 bp AATAGAGAGTCCTTCCACAAGCCATATTCAGTCGTGCCCTCCTCGGTGGACTCTGGTCTGGTTGCCTGCTaGAGCAGGGTTAACATTAGG +
Preference number: 2 (lower is better)
Translates to: NRESFHKPYSVVPSSVDSGLVAC*SRVNIR
Trigger: CCTAATGTTAACCCTGCTTCAGCAGGCAACCAGACC...AGAGTCCACCGAGGAGGGCACGACTGAATATGGCTTGTGGAAGGACTCTCTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR TCA 90 bp TGCGACCCGGCCGCTCGGCTTCTAGCTGCCTACCCAAAGAACCCCGTGTTATGCAAAGAAAAACTGAAATaGCACTGCCCCACCATTATT +
Preference number: 2 (lower is better)
Translates to: CDPAARLLAAYPKNPVLCKEKLK*HCPTII
Trigger: AATAATGGTGGGGCAGTGTCATTTCAGTTTTTCTTT...GCATAACACGGGGTTCTTTGGGTAGGCAGCTAGAAGCCGAGCGGCCGGGTCGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR GCA 90 bp CACTTGGCTTTGGACTCCATCGGTCATCTTTACGCAAGAGCAGAGATGAACGGTAGTTTCCTTGGACAGTaGCATCCTCAGGGTCGGCTC +
Preference number: 2 (lower is better)
Translates to: HLALDSIGHLYARAEMNGSFLGQ*HPQGRL
Trigger: GAGCCGACCCTGAGGATGGCACTGTCCAAGGAAACT...ACCGTTCATCTCTGCTCTTGCGTAAAGATGACCGATGGAGTCCAAAGCCAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp CAGGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCTCCACCAGCCGTCCTTaGTACACTTCCCCACACATG +
Preference number: 2 (lower is better)
Translates to: QESWGRCYILNWVLTLLSSTSRP*YTSPHM
Trigger: CATGTGTGGGGAAGTGTAGCAAGGACGGCTGGTGGA...GGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR-3UTR GCA 90 bp TGTTTCATTCTGACCATTCTGACTCTGCCCAGAACGCCGTCCCACCTGCAGACAACATCCTGTGGTTTCTaGCTGACCCTTCTAAGCCAG +
Preference number: 2 (lower is better)
Translates to: CFILTILTLPRTPSHLQTTSCGF*LTLLSQ
Trigger: CTGGCTTAGAAGGGTCAGGCAGAAACCACAGGATGT...TGTCTGCAGGTGGGACGGCGTTCTGGGCAGAGTCAGAATGGTCAGAATGAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp CACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTTCGTTCTTGCCAAGCTCATCCACAACATCTaGTTGCGGGAGAAACAGCAA +
Preference number: 2 (lower is better)
Translates to: HGDPSEQGGFITPFVLAKLIHNI*LREKQQ
Trigger: TTGCTGTTTCTCCCGCAAGCAGATGTTGTGGATGAG...CTTGGCAAGAACGAAAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CCA 90 bp TTGCCAAGGAGTCTATCGCCTCATCCACAACATCTGCTTGCGGGAGAAACAGCATCAGGTTCCCAAACTTaGGACAGTGAGTGTGACCCC +
Preference number: 2 (lower is better)
Translates to: LPRSLSPHPQHLLAGETASGSQT*DSECDP
Trigger: GGGGTCACACTCACTGTCCCAAGTTTGGGAACCTGA...TGCTGTTTCTCCCGCAAGCAGATGTTGTGGATGAGGCGATAGACTCCTTGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CCA 90 bp GAGTCCTTCCACAAGCCATATTCAGTCGTGCCCTCCTCGGTGGACTCTATGATGCCATCTTGTGTCTTCTaGGTCTGGTTGCCTGCTGAA +
Preference number: 2 (lower is better)
Translates to: ESFHKPYSVVPSSVDSMMPSCVF*VWLPAE
Trigger: TTCAGCAGGCAACCAGACCCAGAAGACACAAGATGG...CATCATAGAGTCCACCGAGGAGGGCACGACTGAATATGGCTTGTGGAAGGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR TCA 90 bp AGGATGTGGGAAGCGGGAACCTCCCATTACGACTGTGGAGTACAATGCAGTAAATTAGGCTCCTGGCTCTaGCCAAGGACTTTCTCATCC +
Preference number: 2 (lower is better)
Translates to: RMWEAGTSHYDCGVQCSKLGSWL*PRTFSS
Trigger: GGATGAGAAAGTCCTTGGTCAGAGCCAGGAGCCTAA...TTTACTGCATTGTACTCCACAGTCGTAATGGGAGGTTCCCGCTTCCCACATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR GCA 90 bp TGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTTTTGAAACATGGGGTCACAACTaGATACACCTTAGAGCTCCG +
Preference number: 2 (lower is better)
Translates to: WAVREWMSRQRHRIMLFETWGHN*IHLRAP
Trigger: CGGAGCTCTAAGGTGTATGCAGTTGTGACCCCATGT...TTCAAAAAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR-3UTR GCA 90 bp TTGCCAAGGAGTCTATCGCCTCATCCACAACATCTGCTTGCGGGAGAAACAGCAACATGGGGTCACAACTaGATACACCTTAGAGCTCCG +
Preference number: 2 (lower is better)
Translates to: LPRSLSPHPQHLLAGETATWGHN*IHLRAP
Trigger: CGGAGCTCTAAGGTGTATGCAGTTGTGACCCCATGT...TGCTGTTTCTCCCGCAAGCAGATGTTGTGGATGAGGCGATAGACTCCTTGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp TCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCTCCACCAGCCGTCCTTaGTACACTTCCCCACACATG +
Preference number: 2 (lower is better)
Translates to: SWGRCYILNWVLTLLSKVSTSRP*YTSPHM
Trigger: CATGTGTGGGGAAGTGTAGCAAGGACGGCTGGTGGA...GACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR-3UTR GCA 90 bp TTGCCAAGGAGTCTATCGCCTCATCCACAACATCTGCTTGCGGGAGAAACAGCAGAATCCTGGGGCAGGTaGTACATCCTAAACTGGGTT +
Preference number: 2 (lower is better)
Translates to: LPRSLSPHPQHLLAGETAESWGR*YILNWV
Trigger: AACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTC...TGCTGTTTCTCCCGCAAGCAGATGTTGTGGATGAGGCGATAGACTCCTTGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp TGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTTTTGAAGAATCCTGGGGCAGGTaGTACATCCTAAACTGGGTT +
Preference number: 2 (lower is better)
Translates to: WAVREWMSRQRHRIMLFEESWGR*YILNWV
Trigger: AACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTC...TTCAAAAAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR-3UTR GCA 90 bp TTGCAAAACCCAGCATGTGAAATGAGGACACCTCCACGGAGACCCTTCCGAGCATATTCTGCCCCCAGCTaGTCCTTGAGGAAAACTTTC +
Preference number: 2 (lower is better)
Translates to: LQNPACEMRTPPRRPFRAYSAPS*SLRKTF
Trigger: GAAAGTTTTCCTCAAGGAGCAGCTGGGGGCAGAATA...TGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATTTCACATGCTGGGTTTTGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp GCGATGAGGTCATCACGCAGGAGGAAATCTCACCCACACGAGGTGGACTTACAGAGACACACGGATGCTTaGCTAAAATATCTGCCGAGA +
Preference number: 2 (lower is better)
Translates to: AMRSSRRRKSHPHEVDLQRHTDA*LKYLPR
Trigger: TCTCGGCAGATATTTTAGGCAAGCATCCGTGTGTCT...CTGTAAGTCCACCTCGTGTGGGTGAGATTTCCTCCTGCGTGATGACCTCATCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp GCGATGAGGTCATCACGCAGGAGGAAATCTCACCCACACGAGGTGGACTTACAGTCCACAACATCTGCTTaGGGGAGAAACAGCAAATGT +
Preference number: 2 (lower is better)
Translates to: AMRSSRRRKSHPHEVDLQSTTSA*GRNSKC
Trigger: ACATTTGCTGTTTCTCCCGCAAGCAGATGTTGTGGA...CTGTAAGTCCACCTCGTGTGGGTGAGATTTCCTCCTGCGTGATGACCTCATCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CCA 90 bp GTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGTGCTACATCCTAAACTaGGTTTTGACTTTGCTTTCC +
Preference number: 2 (lower is better)
Translates to: VLVTLSIWNKGLGQSRGQCYILN*VLTLLS
Trigger: GGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCA...CTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR-3UTR CCA 90 bp GCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTGCTACATCCTAAACTaGGTTTTGACTTTGCTTTCC +
Preference number: 2 (lower is better)
Translates to: AALGCQGVDVQATPQDNACYILN*VLTLLS
Trigger: GGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCA...AGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR-3UTR CCA 90 bp CCCATTACGACTGTGGAGTACAATGCAGTAAAGGAGACGATGCTGCGACCCGGCATGATCTTTGGTAACTaGGTACCAGCTTCTGGTGGA +
Preference number: 2 (lower is better)
Translates to: PITTVEYNAVKETMLRPGMIFGN*VPASGG
Trigger: TCCACCAGAAGCTGGTACCCAGTTACCAAAGATCAT...GCCGGGTCGCAGCATCGTCTCCTTTACTGCATTGTACTCCACAGTCGTAATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR TCA 90 bp CACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTTCGTTCTTGCCAAGTCACAATGTACCTTCTaGGCTTGTCCTACTATTCAG +
Preference number: 2 (lower is better)
Translates to: HGDPSEQGGFITPFVLAKSQCTF*ACPTIQ
Trigger: CTGAATAGTAGGACAAGCTCAGAAGGTACATTGTGA...CTTGGCAAGAACGAAAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR TCA 90 bp CCCAGAATGAGCCTATGTGGGATCAATAGGCACGGGGAGAAAGATGGCAGAGAACATTTACCTTTCTCCTaGAGATGGGAAGACACACGG +
Preference number: 2 (lower is better)
Translates to: PRMSLCGINRHGEKDGREHLPFS*RWEDTR
Trigger: CCGTGTGTCTTCCCATCTTCAGGAGAAAGGTAAATG...TTCTCTGCCATCTTTCTCCCCGTGCCTATTGATCCCACATAGGCTCATTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR TCA 90 bp GACTCAGAAGATTCCATTTTCAGACGTAAGCGCCTGATGGCGGGCCTGACAGAAAGGAATTTCTCCTGCTaGGAGGTAGCTGTCAGGATT +
Preference number: 2 (lower is better)
Translates to: DSEDSIFRRKRLMAGLTERNFSC*EVAVRI
Trigger: AATCCTGACAGCTACCTCTCAGCAGGAGAAATTCCT...TTCTGTCAGGCCCGCCATCAGGCGCTTACGTCTGAAAATGGAATCTTCTGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR TCA 90 bp CCAGGGCTGGGGGCAGAACACTTGATACCAGTGAACCAAGAAGGGAAAACTCTGCGTTTTCGAAGGATATaGATCCAGATGGTCCCAGAA +
Preference number: 2 (lower is better)
Translates to: PGLGAEHLIPVNQEGKTLRFRRI*IQMVPE
Trigger: TTCTGGGACCATCTGGATTCATATCCTTCGAAAACG...CAGAGTTTTCCCTTCTTGGTTCACTGGTATCAAGTGTTCTGCCCCCAGCCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR TCA 90 bp CCAAAGGCTCCCAGCAGGGGAATGATAAACACACCGCGTCTTAGGTTATTTCCTGAAAGCAGGCTCCAATaGTGCTTAGTGGAACGGCAA +
Preference number: 2 (lower is better)
Translates to: PKAPSRGMINTPRLRLFPESRLQ*CLVERQ
Trigger: TTGCCGTTCCACTAAGCATCATTGGAGCCTGCTTTC...AGGAAATAACCTAAGACGCGGTGTGTTTATCATTCCCCTGCTGGGAGCCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR TCA 90 bp GCAGAGCTTAGCATGGGCCGAGTCTCAGCCTCTGAATTGGGAAGAATTCAAAGGCTAAGTTCTTGCCACTaGGTTCTTGAAAGCAGGCTC +
Preference number: 2 (lower is better)
Translates to: AELSMGRVSASELGRIQRLSSCH*VLESRL
Trigger: GAGCCTGCTTTCAAGAACTCAGTGGCAAGAACTTAG...CCTTTGAATTCTTCCCAATTCAGAGGCTGAGACTCGGCCCATGCTAAGCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR GCA 90 bp CATGCTCACTTTCTTCACATACATACTCTTGGACTATGGGGACCAAGTCTGTTGTGTGCTCCAGCCATGTaGCCTGGTGTCACTGTCGGT +
Preference number: 2 (lower is better)
Translates to: HAHFLHIHTLGLWGPSLLCAPAM*PGVTVG
Trigger: ACCGACAGTGACACCAGGGCACATGGCTGGAGCACA...CAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGAGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp TTGCCAAGGAGTCTATCGCCTCATCCACAACATCTGCTTGCGGGAGAAACAGCATATTCTGCCCCCAGCTaGTCCTTGAGGAAAACTTTC +
Preference number: 2 (lower is better)
Translates to: LPRSLSPHPQHLLAGETAYSAPS*SLRKTF
Trigger: GAAAGTTTTCCTCAAGGAGCAGCTGGGGGCAGAATA...TGCTGTTTCTCCCGCAAGCAGATGTTGTGGATGAGGCGATAGACTCCTTGGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp AACCACGCAGAGAGGCTCAGATGCATCGCTGGGCTACAGAAGTGGCCTCTGGGGCTGGTATTATGTTTCTaGACAGGAAAACAAAGTGTT +
Preference number: 2 (lower is better)
Translates to: NHAERLRCIAGLQKWPLGLVLCF*TGKQSV
Trigger: AACACTTTGTTTTCCTGTGCAGAAACATAATACCAG...CCCCAGAGGCCACTTCTGTAGCCCAGCGATGCATCTGAGCCTCTCTGCGTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp TGTGCCTCTTCAACCAACAGACACTTGCTCAGATCCTGCCACTTCTGGGAAAGGGATGTAGGCTACATTTaGCAGGACCTGGAGTGGAAT +
Preference number: 2 (lower is better)
Translates to: CASSTNRHLLRSCHFWERDVGYI*QDLEWN
Trigger: ATTCCACTCCAGGTCCTGGCAAATGTAGCCTACATC...CCTTTCCCAGAAGTGGCAGGATCTGAGCAAGTGTCTGTTGGTTGAAGAGGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR GCA 90 bp GCAGAGCTTAGCATGGGCCGAGTCTCAGCCTCTGAATTGGGAAGAATTCAAAGGCGATTCACACTGTGCTaGTTTGTGTTAGGCAAAGGG +
Preference number: 2 (lower is better)
Translates to: AELSMGRVSASELGRIQRRFTLC*FVLGKG
Trigger: CCCTTTGCCTAACACAAAGCAGCACAGTGTGAATCG...CCTTTGAATTCTTCCCAATTCAGAGGCTGAGACTCGGCCCATGCTAAGCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR CCA 90 bp AAGTATTTGCTTAAATACTACCTATTCTGCCCCCAGCTGCTCCTTGAGGAAAACTGGGCTGTCAGGGAGTaGATGTCCAGGCAACGCCAC +
Preference number: 2 (lower is better)
Translates to: KYLLKYYLFCPQLLLEENWAVRE*MSRQRH
Trigger: GTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCA...GTTTTCCTCAAGGAGCAGCTGGGGGCAGAATAGGTAGTATTTAAGCAAATACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR-3UTR CCA 90 bp GCGATGAGGTCATCACGCAGGAGGAAATCTCACCCACACGAGGTGGACTTACAGGTTACAATACAGACATaGCCAGATGACCTGCTTGTT +
Preference number: 2 (lower is better)
Translates to: AMRSSRRRKSHPHEVDLQVTIQT*PDDLLV
Trigger: AACAAGCAGGTCATCTGGCCATGTCTGTATTGTAAC...CTGTAAGTCCACCTCGTGTGGGTGAGATTTCCTCCTGCGTGATGACCTCATCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CCA 90 bp GAGTCCTTCCACAAGCCATATTCAGTCGTGCCCTCCTCGGTGGACTCTATGATGAGGATTTCTCTCCCATaGCCTTTGAATCCACTGTAC +
Preference number: 2 (lower is better)
Translates to: ESFHKPYSVVPSSVDSMMRISLP*PLNPLY
Trigger: GTACAGTGGATTCAAAGGCCATGGGAGAGAAATCCT...CATCATAGAGTCCACCGAGGAGGGCACGACTGAATATGGCTTGTGGAAGGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR CCA 90 bp CCAGGGCTGGGGGCAGAACACTTGATACCAGTGAACCAAGAAGGGAAAACTCTGTGCCAGGACCTGGAGTaGAATGACAATCATGAAGAT +
Preference number: 2 (lower is better)
Translates to: PGLGAEHLIPVNQEGKTLCQDLE*NDNHED
Trigger: ATCTTCATGATTGTCATTCCACTCCAGGTCCTGGCA...CAGAGTTTTCCCTTCTTGGTTCACTGGTATCAAGTGTTCTGCCCCCAGCCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR CAA 90 bp AGACATGGCCAGATGACCTGCTTGTTAGGAAGGCTGTGGCCATCTTaGTTTCTGAAACAGTCTTATCTCATCTGTCCACTGCTGCTCTGG +
Preference number: 2 (lower is better)
Translates to: RHGQMTCLLGRLWPS*FLKQSYLICPLLLW
Trigger: CCAGAGCAGCAGTGGACAGATGAGATAAGACTGTTTCAGAAACAAAGATGGCCACAGCCTTCCTAACAAGCAGGTCATCTGGCCATGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR TCA 90 bp TGTGCCTCTTCAACCAACAGACACTTGCTCAGATCCTGCCACTTCTGGGAAAGGCTTCTTGTAAATGTCTaGTTGACCACACCACTGGGA +
Preference number: 2 (lower is better)
Translates to: CASSTNRHLLRSCHFWERLLVNV*LTTPLG
Trigger: TCCCAGTGGTGTGGTCAATCAGACATTTACAAGAAG...CCTTTCCCAGAAGTGGCAGGATCTGAGCAAGTGTCTGTTGGTTGAAGAGGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR TCA 90 bp CCAGGGCTGGGGGCAGAACACTTGATACCAGTGAACCAAGAAGGGAAAACTCTGACGATAGAGGATGTCTaGGGATCATTAGCAGACTTA +
Preference number: 2 (lower is better)
Translates to: PGLGAEHLIPVNQEGKTLTIEDV*GSLADL
Trigger: TAAGTCTGCTAATGATCCTCAGACATCCTCTATCGT...CAGAGTTTTCCCTTCTTGGTTCACTGGTATCAAGTGTTCTGCCCCCAGCCCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR GCA 90 bp CATGCTCACTTTCTTCACATACATACTCTTGGACTATGGGGACCAAGTCTGTTGTCCACCAGCCGTCCTTaGTACACTTCCCCACACATG +
Preference number: 2 (lower is better)
Translates to: HAHFLHIHTLGLWGPSLLSTSRP*YTSPHM
Trigger: CATGTGTGGGGAAGTGTAGCAAGGACGGCTGGTGGA...CAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGAGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp TTGCCAAGGAGTCTATCGCCTCATCCACAACATCTGCTTGCGGGAGAAACAGCAGATGGCGAATCAAAGTaGAGAAAAAGAACACCCGCT +
Preference number: 2 (lower is better)
Translates to: LPRSLSPHPQHLLAGETADGESK*RKRTPA
Trigger: AGCGGGTGTTCTTTTTCTGCACTTTGATTCGCCATC...TGCTGTTTCTCCCGCAAGCAGATGTTGTGGATGAGGCGATAGACTCCTTGGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CCA 90 bp AAGTATTTGCTTAAATACTACCTATTCTGCCCCCAGCTGCTCCTTGAGGAAAACTCTGGAATAAGGGTCTaGGGCAAAGCCGAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: KYLLKYYLFCPQLLLEENSGIRV*GKAEGR
Trigger: CCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGA...GTTTTCCTCAAGGAGCAGCTGGGGGCAGAATAGGTAGTATTTAAGCAAATACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR-3UTR CCA 90 bp TGTTTCATTCTGACCATTCTGACTCTGCCCAGAACGCCGTCCCACCTGCAGACATGTTCATTCAAGCTCTaGAAGTGTGGAAGGGAACTT +
Preference number: 2 (lower is better)
Translates to: CFILTILTLPRTPSHLQTCSFKL*KCGREL
Trigger: AAGTTCCCTTCCACACTTCCAGAGCTTGAATGAACA...TGTCTGCAGGTGGGACGGCGTTCTGGGCAGAGTCAGAATGGTCAGAATGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CCA 90 bp CTGAAAACTCCTTCTGCATCCCAATCTCTAACCAGGAAAGCAAATGCTATTTACAGAGGTGAGCAGCTGTaGCCTGGGAAGGCGCTTGCT +
Preference number: 2 (lower is better)
Translates to: LKTPSASQSLTRKANAIYRGEQL*PGKALA
Trigger: AGCAAGCGCCTTCCCAGGCCACAGCTGCTCACCTCT...GTAAATAGCATTTGCTTTCCTGGTTAGAGATTGGGATGCAGAAGGAGTTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CCA 90 bp GCGATGAGGTCATCACGCAGGAGGAAATCTCACCCACACGAGGTGGACTTACAGTTGTTAGGAAGGCTGTaGCCATCTTTGTTTCTGAAA +
Preference number: 2 (lower is better)
Translates to: AMRSSRRRKSHPHEVDLQLLGRL*PSLFLK
Trigger: TTTCAGAAACAAAGATGGCCACAGCCTTCCTAACAA...CTGTAAGTCCACCTCGTGTGGGTGAGATTTCCTCCTGCGTGATGACCTCATCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR CAA 90 bp GCCAGAATGCATCTGCAATTCCAACAGGCATCGCTATGCTCTTCCTaGGTCTGTAAGGACTGGATGCCTGGAGTAGACTGTTTTAAGTAC +
Preference number: 2 (lower is better)
Translates to: ARMHLQFQQASLCSS*VCKDWMPGVDCFKY
Trigger: GTACTTAAAACAGTCTACTCCAGGCATCCAGTCCTTACAGACCAAGGAAGAGCATAGCGATGCCTGTTGGAATTGCAGATGCATTCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR TCA 90 bp GAACAACCATGTTCTGAATGGAGACTTTTTCAGGTTCCCAAACTTGGGACAGTGACAAAGCCACAAGCATaGAGGGAAGCCAGACAGTGC +
Preference number: 2 (lower is better)
Translates to: EQPCSEWRLFQVPKLGTVTKPQA*REARQC
Trigger: GCACTGTCTGGCTTCCCTTCATGCTTGTGGCTTTGT...CACTGTCCCAAGTTTGGGAACCTGAAAAAGTCTCCATTCAGAACATGGTTGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR TCA 90 bp GAACAACCATGTTCTGAATGGAGACTTTTTCAGGTTCCCAAACTTGGGACAGTGCCCCCAGCTGCTCCTTaGGGAAAACTTTCCATTTCC +
Preference number: 2 (lower is better)
Translates to: EQPCSEWRLFQVPKLGTVPPAAP*GKLSIS
Trigger: GGAAATGGAAAGTTTTCCTCAAGGAGCAGCTGGGGG...CACTGTCCCAAGTTTGGGAACCTGAAAAAGTCTCCATTCAGAACATGGTTGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR TCA 90 bp CCAAAGGCTCCCAGCAGGGGAATGATAAACACACCGCGTCTTAGGTTATTTCCTCTCTCCCATGGCCTTTaGATCCACTGTACTTCTTTT +
Preference number: 2 (lower is better)
Translates to: PKAPSRGMINTPRLRLFPLSHGL*IHCTSF
Trigger: AAAAGAAGTACAGTGGATTCAAAGGCCATGGGAGAG...AGGAAATAACCTAAGACGCGGTGTGTTTATCATTCCCCTGCTGGGAGCCTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR GCA 90 bp AAGTATTTGCTTAAATACTACCTATTCTGCCCCCAGCTGCTCCTTGAGGAAAACAGTTTCCTTGGACAGTaGCATCCTCAGGGTCGGCTC +
Preference number: 2 (lower is better)
Translates to: KYLLKYYLFCPQLLLEENSFLGQ*HPQGRL
Trigger: GAGCCGACCCTGAGGATGGCACTGTCCAAGGAAACT...GTTTTCCTCAAGGAGCAGCTGGGGGCAGAATAGGTAGTATTTAAGCAAATACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR-3UTR GCA 90 bp CTGAAAACTCCTTCTGCATCCCAATCTCTAACCAGGAAAGCAAATGCTATTTACTGTGCTCCAGCCATGTaGCCTGGTGTCACTGTCGGT +
Preference number: 2 (lower is better)
Translates to: LKTPSASQSLTRKANAIYCAPAM*PGVTVG
Trigger: ACCGACAGTGACACCAGGGCACATGGCTGGAGCACA...GTAAATAGCATTTGCTTTCCTGGTTAGAGATTGGGATGCAGAAGGAGTTTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp TCACTTTCTTCACATACATACTCTTGGACTATGGGGACCAAGTCTGTTGAATTCGAAGCCAGACAGTGCTaGTCTGGGCTGTCAGGGAGT +
Preference number: 2 (lower is better)
Translates to: SLSSHTYSWTMGTKSVEFEARQC*SGLSGS
Trigger: ACTCCCTGACAGCCCAGAGCAGCACTGTCTGGCTTC...GAATTCAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CCA 90 bp TTGCAAAACCCAGCATGTGAAATGAGGACACCTCCACGGAGACCCTTCCGAGCATGCTACATCCTAAACTaGGTTTTGACTTTGCTTTCC +
Preference number: 2 (lower is better)
Translates to: LQNPACEMRTPPRRPFRACYILN*VLTLLS
Trigger: GGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCA...TGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATTTCACATGCTGGGTTTTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CCA 90 bp CTGAAAACTCCTTCTGCATCCCAATCTCTAACCAGGAAAGCAAATGCTATTTACGGCCTCTGGGGAATCTaGAGTATGTTCAGCCTGCCG +
Preference number: 2 (lower is better)
Translates to: LKTPSASQSLTRKANAIYGLWGI*SMFSLP
Trigger: CGGCAGGCTGAACATACTCCAGATTCCCCAGAGGCC...GTAAATAGCATTTGCTTTCCTGGTTAGAGATTGGGATGCAGAAGGAGTTTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CCA 90 bp AATAGAGAGTCCTTCCACAAGCCATATTCAGTCGTGCCCTCCTCGGTGGACTCTGCCGCCATCAGCCAGTaGATTTTAAATACATCATTC +
Preference number: 2 (lower is better)
Translates to: NRESFHKPYSVVPSSVDSAAISQ*ILNTSF
Trigger: GAATGATGTATTTAAAATCCACTGGCTGATGGCGGC...AGAGTCCACCGAGGAGGGCACGACTGAATATGGCTTGTGGAAGGACTCTCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR CAA 90 bp GGTCACACGACTAGGCAAATGCAATTTACGATCTGCAAAAGCTGTTaGAAGAGTCAAAGCCCCCATGTGAACACGATTTCTGGACCCTGT +
Preference number: 2 (lower is better)
Translates to: GHTTRQMQFTICKSC*KSQSPHVNTISGPC
Trigger: ACAGGGTCCAGAAATCGTGTTCACATGGGGGCTTTGACTCTTCAAACAGCTTTTGCAGATCGTAAATTGCATTTGCCTAGTCGTGTGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR TCA 90 bp CACTTGGCTTTGGACTCCATCGGTCATCTTTACGCAAGAGCAGAGATGAACGGTTCACAATGTACCTTCTaGGCTTGTCCTACTATTCAG +
Preference number: 2 (lower is better)
Translates to: HLALDSIGHLYARAEMNGSQCTF*ACPTIQ
Trigger: CTGAATAGTAGGACAAGCTCAGAAGGTACATTGTGA...ACCGTTCATCTCTGCTCTTGCGTAAAGATGACCGATGGAGTCCAAAGCCAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR TCA 90 bp CCCAGAATGAGCCTATGTGGGATCAATAGGCACGGGGAGAAAGATGGCAGAGAAGGATTTACAGATCAATaGCTGTTCCTATTGTCCAAG +
Preference number: 2 (lower is better)
Translates to: PRMSLCGINRHGEKDGREGFTDQ*LFLLSK
Trigger: CTTGGACAATAGGAACAGTCATTGATCTGTAAATCC...TTCTCTGCCATCTTTCTCCCCGTGCCTATTGATCCCACATAGGCTCATTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR TCA 90 bp AGGATGTGGGAAGCGGGAACCTCCCATTACGACTGTGGAGTACAATGCAGTAAAAAAGTCATTGTGCTGTaGAAAGCCACGCAGTTATCT +
Preference number: 2 (lower is better)
Translates to: RMWEAGTSHYDCGVQCSKKVIVL*KATQLS
Trigger: AGATAACTGCGTGGCTTTTCACAGCACAATGACTTT...TTTACTGCATTGTACTCCACAGTCGTAATGGGAGGTTCCCGCTTCCCACATCCT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR GCA 90 bp AGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTGTTGAAAGGGAAGCCAGACAGTaGTGCTCTGGGCTGTCAGGG +
Preference number: 2 (lower is better)
Translates to: SFCEVFCHPKIPESETVEREARQ*CSGLSG
Trigger: CCCTGACAGCCCAGAGCAGCACTGTCTGGCTTCCCT...TTCAACAGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp TTGCAAAACCCAGCATGTGAAATGAGGACACCTCCACGGAGACCCTTCCGAGCATTCTGTGAAGTATTTTaGCATCCTAAAATCCCTGAG +
Preference number: 2 (lower is better)
Translates to: LQNPACEMRTPPRRPFRAFCEVF*HPKIPE
Trigger: CTCAGGGATTTTAGGATGGCAAAATACTTCACAGAA...TGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATTTCACATGCTGGGTTTTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp CTGAAAACTCCTTCTGCATCCCAATCTCTAACCAGGAAAGCAAATGCTATTTACAGGTACCTGTTCCCCTaGAGGTGTGGCTCTCTGACA +
Preference number: 2 (lower is better)
Translates to: LKTPSASQSLTRKANAIYRYLFP*RCGSLT
Trigger: TGTCAGAGAGCCACACCTGCAGGGGAACAGGTACCT...GTAAATAGCATTTGCTTTCCTGGTTAGAGATTGGGATGCAGAAGGAGTTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp TTGCCAAGGAGTCTATCGCCTCATCCACAACATCTGCTTGCGGGAGAAACAGCAAGTGAACACTTAGGGTaGATTTACCTTTCTCCTGAA +
Preference number: 2 (lower is better)
Translates to: LPRSLSPHPQHLLAGETASEHLG*IYLSPE
Trigger: TTCAGGAGAAAGGTAAATGCACCCTAAGTGTTCACT...TGCTGTTTCTCCCGCAAGCAGATGTTGTGGATGAGGCGATAGACTCCTTGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp CACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTTCGTTCTTGCCAAGCTGGTATTATGTTTCTaGACAGGAAAACAAAGTGTT +
Preference number: 2 (lower is better)
Translates to: HGDPSEQGGFITPFVLAKLVLCF*TGKQSV
Trigger: AACACTTTGTTTTCCTGTGCAGAAACATAATACCAG...CTTGGCAAGAACGAAAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp GCAGAGCTTAGCATGGGCCGAGTCTCAGCCTCTGAATTGGGAAGAATTCAAAGGTTATCAGAAAGGATGTaGTTAATGAAAGCCCAGCCA +
Preference number: 2 (lower is better)
Translates to: AELSMGRVSASELGRIQRLSERM*LMKAQP
Trigger: TGGCTGGGCTTTCATTAAGCACATCCTTTCTGATAA...CCTTTGAATTCTTCCCAATTCAGAGGCTGAGACTCGGCCCATGCTAAGCTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR CCA 90 bp CACTTGGCTTTGGACTCCATCGGTCATCTTTACGCAAGAGCAGAGATGAACGGTTCACATACATACTCTTaGACTATGGGGACCAAGTCT +
Preference number: 2 (lower is better)
Translates to: HLALDSIGHLYARAEMNGSHTYS*TMGTKS
Trigger: AGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGA...ACCGTTCATCTCTGCTCTTGCGTAAAGATGACCGATGGAGTCCAAAGCCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR TCA 90 bp TGCCTCCTACAAGTCACTAGAGTCATATTCAACATTACAAAATGCAGTGCTACTTGGCTTGTCAGCTGGTaGAGCCACTTGGCTTTGGAC +
Preference number: 2 (lower is better)
Translates to: CLLQVTRVIFNITKCSATWLVSW*SHLALD
Trigger: GTCCAAAGCCAAGTGGCTTCACCAGCTGACAAGCCA...AGTAGCACTGCATTTTGTAATGTTGAATATGACTCTAGTGACTTGTAGGAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp GAACAACCATGTTCTGAATGGAGACTTTTTCAGGTTCCCAAACTTGGGACAGTGTATTCTGCCCCCAGCTaGTCCTTGAGGAAAACTTTC +
Preference number: 2 (lower is better)
Translates to: EQPCSEWRLFQVPKLGTVYSAPS*SLRKTF
Trigger: GAAAGTTTTCCTCAAGGAGCAGCTGGGGGCAGAATA...CACTGTCCCAAGTTTGGGAACCTGAAAAAGTCTCCATTCAGAACATGGTTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp GAGGGCTTTGGTAGTCACAGATTGAGACACATTTCTGCGAAAACTGGTATTATGAAATACTACCTATTCTaGCCCCAGCTGCTCCTTGAG +
Preference number: 2 (lower is better)
Translates to: EGFGSHRLRHISAKTGIMKYYLF*PQLLLE
Trigger: CTCAAGGAGCAGCTGGGGGCAGAATAGGTAGTATTT...CATAATACCAGTTTTCGCAGAAATGTGTCTCAATCTGTGACTACCAAAGCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CCA 90 bp TCACTTTCTTCACATACATACTCTTGGACTATGGGGACCAAGTCTGTTGAATTCGCCTTCTTTTCCTGTTaGAAAGAAGACCACTGGGCC +
Preference number: 2 (lower is better)
Translates to: SLSSHTYSWTMGTKSVEFAFFSC*KEDHWA
Trigger: GGCCCAGTGGTCTTCTTTCCAACAGGAAAAGAAGGC...GAATTCAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CCA 90 bp CTGAAAACTCCTTCTGCATCCCAATCTCTAACCAGGAAAGCAAATGCTATTTACCACCCTAGGGAAAACTaGAGTGAAGAGCGGGTCTTT +
Preference number: 2 (lower is better)
Translates to: LKTPSASQSLTRKANAIYHPREN*SEERVF
Trigger: AAAGACCCGCTCTTCACTCCAGTTTTCCCTAGGGTG...GTAAATAGCATTTGCTTTCCTGGTTAGAGATTGGGATGCAGAAGGAGTTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR CAA 90 bp GAAGCCTTTTACCAGTTACAATACAGACATGGCCAGATGACCTGCTaGTTAGGAAGGCTGTGGCCATCTTTGTTTCTGAAACAGTCTTAT +
Preference number: 2 (lower is better)
Translates to: EAFYQLQYRHGQMTC*LGRLWPSLFLKQSY
Trigger: ATAAGACTGTTTCAGAAACAAAGATGGCCACAGCCTTCCTAACAAGCAGGTCATCTGGCCATGTCTGTATTGTAACTGGTAAAAGGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp CTGAAAACTCCTTCTGCATCCCAATCTCTAACCAGGAAAGCAAATGCTATTTACGGGAAGACACACGGATaGTTGCCTAAAATATCTGCC +
Preference number: 2 (lower is better)
Translates to: LKTPSASQSLTRKANAIYGKTHG*LPKISA
Trigger: GGCAGATATTTTAGGCAAGCATCCGTGTGTCTTCCC...GTAAATAGCATTTGCTTTCCTGGTTAGAGATTGGGATGCAGAAGGAGTTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CCA 90 bp GAACAACCATGTTCTGAATGGAGACTTTTTCAGGTTCCCAAACTTGGGACAGTGTGTTCATTCAAGCTCTaGAAGTGTGGAAGGGAACTT +
Preference number: 2 (lower is better)
Translates to: EQPCSEWRLFQVPKLGTVCSFKL*KCGREL
Trigger: AAGTTCCCTTCCACACTTCCAGAGCTTGAATGAACA...CACTGTCCCAAGTTTGGGAACCTGAAAAAGTCTCCATTCAGAACATGGTTGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CCA 90 bp CTGAAAACTCCTTCTGCATCCCAATCTCTAACCAGGAAAGCAAATGCTATTTACTACAGAAGTGGCCTCTaGGGAATCTGGAGTATGTTC +
Preference number: 2 (lower is better)
Translates to: LKTPSASQSLTRKANAIYYRSGL*GIWSMF
Trigger: GAACATACTCCAGATTCCCCAGAGGCCACTTCTGTA...GTAAATAGCATTTGCTTTCCTGGTTAGAGATTGGGATGCAGAAGGAGTTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR CAA 90 bp GCTATAAATACCACCAATGGTTCTGCTATGTGCATCCGATATTTTTaGCCCGATCTGAAATACTGCAAGGGCTTAACCATTCAAACACCG +
Preference number: 2 (lower is better)
Translates to: AINTTNGSAMCIRYF*PDLKYCKGLTIQTP
Trigger: CGGTGTTTGAATGGTTAAGCCCTTGCAGTATTTCAGATCGGGCAAAAAATATCGGATGCACATAGCAGAACCATTGGTGGTATTTATAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR TCA 90 bp CTTCTTCCTGAGAAAGTTGTAGGTAGGGGTTATCTGAAGCCGGACGGAATTTATATGTTAAAGAAAAACTaGAATGACACTGCCCCACCA +
Preference number: 2 (lower is better)
Translates to: LLPEKVVGRGYLKPDGIYMLKKN*NDTAPP
Trigger: TGGTGGGGCAGTGTCATTTCAGTTTTTCTTTAACAT...ATAAATTCCGTCCGGCTTCAGATAACCCCTACCTACAACTTTCTCAGGAAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR GCA 90 bp TGCCTCCTACAAGTCACTAGAGTCATATTCAACATTACAAAATGCAGTGCTACTGGGAAGACACACGGATaGTTGCCTAAAATATCTGCC +
Preference number: 2 (lower is better)
Translates to: CLLQVTRVIFNITKCSATGKTHG*LPKISA
Trigger: GGCAGATATTTTAGGCAAGCATCCGTGTGTCTTCCC...AGTAGCACTGCATTTTGTAATGTTGAATATGACTCTAGTGACTTGTAGGAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR TCA 90 bp AAGTATTTGCTTAAATACTACCTATTCTGCCCCCAGCTGCTCCTTGAGGAAAACTTTCCCCCAAAATTCTaGTCAAACACAACAAAGCCA +
Preference number: 2 (lower is better)
Translates to: KYLLKYYLFCPQLLLEENFPPKF*SNTTKP
Trigger: TGGCTTTGTTGTGTTTGATCAGAATTTTGGGGGAAA...GTTTTCCTCAAGGAGCAGCTGGGGGCAGAATAGGTAGTATTTAAGCAAATACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR-3UTR GCA 90 bp GAGGGCTTTGGTAGTCACAGATTGAGACACATTTCTGCGAAAACTGGTATTATGAGTGAACACTTAGGGTaGATTTACCTTTCTCCTGAA +
Preference number: 2 (lower is better)
Translates to: EGFGSHRLRHISAKTGIMSEHLG*IYLSPE
Trigger: TTCAGGAGAAAGGTAAATGCACCCTAAGTGTTCACT...CATAATACCAGTTTTCGCAGAAATGTGTCTCAATCTGTGACTACCAAAGCCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CCA 90 bp TCATTAGCAGACTTAGAGATGACTCAGAAGATTCCATTTTCAGACGTAAGCGCCGGATATGAATCCAGATaGTCCCAGAAAGAAAGAAGA +
Preference number: 2 (lower is better)
Translates to: SLADLEMTQKIPFSDVSAGYESR*SQKERR
Trigger: TCTTCTTTCTTTCTGGGACCATCTGGATTCATATCC...GGCGCTTACGTCTGAAAATGGAATCTTCTGAGTCATCTCTAAGTCTGCTAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR CAA 90 bp TCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTGTaGAATCATGCTCACTTTCTTCACATACATACTCTTGGACTATGG +
Preference number: 2 (lower is better)
Translates to: SVKYFAILKSLRVKL*NHAHFLHIHTLGLW
Trigger: CCATAGTCCAAGAGTATGTATGTGAAGAAAGTGAGCATGATTCAACAGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR CAA 90 bp AGCGGGTCTTTCAGAACATTTGGTACTTTCTGGATGAATATCTTTTaGATATACCAAGAGGCATCAAGTCAAAGTCTCACTTCTATAGCG +
Preference number: 2 (lower is better)
Translates to: SGSFRTFGTFWMNIF*IYQEASSQSLTSIA
Trigger: CGCTATAGAAGTGAGACTTTGACTTGATGCCTCTTGGTATATCAAAAAGATATTCATCCAGAAAGTACCAAATGTTCTGAAAGACCCGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR GCA 90 bp TGCCTCCTACAAGTCACTAGAGTCATATTCAACATTACAAAATGCAGTGCTACTTTCTGTGAAGTATTTTaGCATCCTAAAATCCCTGAG +
Preference number: 2 (lower is better)
Translates to: CLLQVTRVIFNITKCSATFCEVF*HPKIPE
Trigger: CTCAGGGATTTTAGGATGGCAAAATACTTCACAGAA...AGTAGCACTGCATTTTGTAATGTTGAATATGACTCTAGTGACTTGTAGGAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR GCA 72 bp GACCACGACTCTCACCCTCGGAGGTACCTGTTCCCCTaGAGGTGTGGCTCTCTGACAACCCCTAGGCAGGGG +
Preference number: 3 (lower is better)
Translates to: DHDSHPRRYLFP*RCGSLTTPRQG
Trigger: CCCCTGCCTAGGGGTTGTCAGAGAGCCACACCTGCAGGGGAACAGGTACCTCCGAGGGTGAGAGTCGTGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR GCA 72 bp AGGGCTGCGGCTCCAGCGCTTGTCCACACACACGCCTaGCTCTCTCTAGTTCCTCCACTGCCTGGCTTCCTC +
Preference number: 3 (lower is better)
Translates to: RAAAPALVHTHA*LSLVPPLPGFL
Trigger: GAGGAAGCCAGGCAGTGGAGGAACTAGAGAGAGGCAGGCGTGTGTGTGGACAAGCGCTGGAGCCGCAGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR GCA 72 bp GAGACGATGCTGCGACCCGGCCGCTCGGCTTCTAGCTaGCTACCCAAAGAACCCCGTGTTATGCGGACGGAC +
Preference number: 3 (lower is better)
Translates to: ETMLRPGRSASS*LPKEPRVMRTD
Trigger: GTCCGTCCGCATAACACGGGGTTCTTTGGGTAGGCAGCTAGAAGCCGAGCGGCCGGGTCGCAGCATCGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR CCA 72 bp GCCCAGACATACGCGTGGAATCTGAACACCCAACGCTaGCGTTCCCGTGCCAGTCTGAGGGCTGCGGCTCCA +
Preference number: 3 (lower is better)
Translates to: AQTYAWNLNTQR*RSRASLRAAAP
Trigger: TGGAGCCGCAGCCCTCAGACTGGCACGGGAACGCCAGCGTTGGGTGTTCAGATTCCACGCGTATGTCTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR TCA 72 bp CGTGGAGCTGAGCAGAGAGAGCTGTCCCATGCTGCCTaGCCCGCTGACAGCCAAGCAGAGCTTAGCATGGGC +
Preference number: 3 (lower is better)
Translates to: RGAEQRELSHAA*PADSQAELSMG
Trigger: GCCCATGCTAAGCTCTGCTTGGCTGTCAGCGGGTCAGGCAGCATGGGACAGCTCTCTCTGCTCAGCTCCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR GCA 72 bp TGGCGCCCGCTGGCAGGACCTGCCTTCCTTTACTGTTaGCGTGGAGCTGAGCAGAGAGAGCTGTCCCATGCT +
Preference number: 3 (lower is better)
Translates to: WRPLAGPAFLYC*RGAEQRELSHA
Trigger: AGCATGGGACAGCTCTCTCTGCTCAGCTCCACGGCAACAGTAAAGGAAGGCAGGTCCTGCCAGCGGGCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR GCA 72 bp CAAGCCATGCCCATTCACTCCTGCACCATCTCAGTGTaGTCCCTCACACAGGGCCTGAGATGTGTGGGGCCC +
Preference number: 3 (lower is better)
Translates to: QAMPIHSCTISV*SLTQGLRCVGP
Trigger: GGGCCCCACACATCTCAGGCCCTGTGTGAGGGAGCACACTGAGATGGTGCAGGAGTGAATGGGCATGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR GCA 72 bp CGGCTTCTAGCTGCCTACCCAAAGAACCCCGTGTTATaGGGACGGACCAAGCCAAAGGCTCCCAGCAGGGGA +
Preference number: 3 (lower is better)
Translates to: RLLAAYPKNPVL*GRTKPKAPSRG
Trigger: TCCCCTGCTGGGAGCCTTTGGCTTGGTCCGTCCGCATAACACGGGGTTCTTTGGGTAGGCAGCTAGAAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR CCA 72 bp GGTGGACTTACAGGGCTGTGTGCTGCCTGGGCAGGCTaGACATGTCCAGGGCGGGGAAACCCTGGATATTTC +
Preference number: 3 (lower is better)
Translates to: GGLTGLCAAWAG*TCPGRGNPGYF
Trigger: GAAATATCCAGGGTTTCCCCGCCCTGGACATGTCCAGCCTGCCCAGGCAGCACACAGCCCTGTAAGTCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR CCA 72 bp GGTCATCACGCAGGAGGAAATCTCACCCACACGAGGTaGACTTACAGGGCTGTGTGCTGCCTGGGCAGGCTG +
Preference number: 3 (lower is better)
Translates to: GHHAGGNLTHTR*TYRAVCCLGRL
Trigger: CAGCCTGCCCAGGCAGCACACAGCCCTGTAAGTCCACCTCGTGTGGGTGAGATTTCCTCCTGCGTGATGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR CCA 72 bp CTTCCTCTGCATGGGGAGATGCTGTTTGGCGCCCGCTaGCAGGACCTGCCTTCCTTTACTGTTGCCGTGGAG +
Preference number: 3 (lower is better)
Translates to: LPLHGEMLFGAR*QDLPSFTVAVE
Trigger: CTCCACGGCAACAGTAAAGGAAGGCAGGTCCTGCCAGCGGGCGCCAAACAGCATCTCCCCATGCAGAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR CCA 72 bp CTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTaGGGCAAAGCCGAGGGCAGGAATCCTGGGGCAGGT +
Preference number: 3 (lower is better)
Translates to: LSWSLSASGIRV*GKAEGRNPGAG
Trigger: ACCTGCCCCAGGATTCCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR CCA 72 bp GCCTCAGGAGCTGCTGTCCTGGTCACTCTCAGCATCTaGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGAA +
Preference number: 3 (lower is better)
Translates to: ASGAAVLVTLSI*NKGLGQSRGQE
Trigger: TTCCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGCAGCTCCTGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR-3UTR CAA 90 bp CCCACCTGCAGACACCCTGCTGCCAGAACTCCAACAGGTCCCCGAGGTAGCGAGCCTGCTTTCCCAATCTaGGGCTGGGGTTTTGACTTT +
Preference number: 3 (lower is better)
Translates to: PTCRHPAARTPTGPRGSEPAFPI*GWGFDF
Trigger: AAAGTCAAAACCCCAGCCCAAGATTGGGAAAGCAGG...CTCGCTACCTCGGGGACCTGTTGGAGTTCTGGCAGCAGGGTGTCTGCAGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CAA 90 bp TTGCAAAACCCAGCATGTGAAATGAGGACACCTCCACGGAGACCCTTCCGAGCAGGCCTGGGAAGGCGCTaGCTCTTCCTCCACATCAGC +
Preference number: 3 (lower is better)
Translates to: LQNPACEMRTPPRRPFRAGLGRR*LFLHIS
Trigger: GCTGATGTGGAGGAAGAGCAAGCGCCTTCCCAGGCC...TGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATTTCACATGCTGGGTTTTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR TCA 72 bp CCTGGCTTCCTCGCTTGCAAAACCCAGCATGTGAAATaGGGACACCTCCACGGAGACCCTTCCGAGCAGGGA +
Preference number: 3 (lower is better)
Translates to: PGFLACKTQHVK*GHLHGDPSEQG
Trigger: TCCCTGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATTTCACATGCTGGGTTTTGCAAGCGAGGAAGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR GCA 72 bp GAAGCGGGAACCTCCCATTACGACTGTGGAGTACAATaGAGTAAAGGAGACGATGCTGCGACCCGGCCGCTC +
Preference number: 3 (lower is better)
Translates to: EAGTSHYDCGVQ*SKGDDAATRPL
Trigger: GAGCGGCCGGGTCGCAGCATCGTCTCCTTTACTGCATTGTACTCCACAGTCGTAATGGGAGGTTCCCGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR CCA 72 bp CGAGGGCAGAGGAGGAGAGAAGAGGGAGGGAGGCTGTaGAATGAGACAGCAGAGATGGCGATGAGGTCATCA +
Preference number: 3 (lower is better)
Translates to: RGQRRREEGGRL*NETAEMAMRSS
Trigger: TGATGACCTCATCGCCATCTCTGCTGTCTCATTCCACAGCCTCCCTCCCTCTTCTCTCCTCCTCTGCCCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR CCA 72 bp GCAGAGAGGCTCAGATGCATCGCTGGGCTACAGAAGTaGCCTCTGGGGAATCTGGAGTATGTTCAGCCTGCC +
Preference number: 3 (lower is better)
Translates to: AERLRCIAGLQK*PLGNLEYVQPA
Trigger: GGCAGGCTGAACATACTCCAGATTCCCCAGAGGCCACTTCTGTAGCCCAGCGATGCATCTGAGCCTCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR CCA 72 bp CAGAGCTTAGCATGGGCCGAGTCTCAGCCTCTGAATTaGGAAGAATTCAAAGGCTGCCAGGGCTGGGGGCAG +
Preference number: 3 (lower is better)
Translates to: QSLAWAESQPLN*EEFKGCQGWGQ
Trigger: CTGCCCCCAGCCCTGGCAGCCTTTGAATTCTTCCCAATTCAGAGGCTGAGACTCGGCCCATGCTAAGCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR CAA 90 bp CCCACCTGCAGACACCCTGCTGCCAGAACTCCAACAGGTCCCCGAGGTAGCGAGTTCACATACATACTCTaGGACTATGGGGACCAAGTC +
Preference number: 3 (lower is better)
Translates to: PTCRHPAARTPTGPRGSEFTYIL*DYGDQV
Trigger: GACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAA...CTCGCTACCTCGGGGACCTGTTGGAGTTCTGGCAGCAGGGTGTCTGCAGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CAA 90 bp TGTTTCATTCTGACCATTCTGACTCTGCCCAGAACGCCGTCCCACCTGCAGACACTGCAGGAGGGTGGCTaGTCAGCTGGTGAAGCCACT +
Preference number: 3 (lower is better)
Translates to: CFILTILTLPRTPSHLQTLQEGG*SAGEAT
Trigger: AGTGGCTTCACCAGCTGACAAGCCACCCTCCTGCAG...TGTCTGCAGGTGGGACGGCGTTCTGGGCAGAGTCAGAATGGTCAGAATGAAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR TCA 72 bp AGGACCAGCACTGCAGACACTCGGCCATGCTGTGAGTaGGCCCAGACATACGCGTGGAATCTGAACACCCAA +
Preference number: 3 (lower is better)
Translates to: RTSTADTRPCCE*AQTYAWNLNTQ
Trigger: TTGGGTGTTCAGATTCCACGCGTATGTCTGGGCTCACTCACAGCATGGCCGAGTGTCTGCAGTGCTGGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR TCA 72 bp GAGGGAGGCTGTGGAATGAGACAGCAGAGATGGCGATaGGGTCATCACGCAGGAGGAAATCTCACCCACACG +
Preference number: 3 (lower is better)
Translates to: EGGCGMRQQRWR*GHHAGGNLTHT
Trigger: CGTGTGGGTGAGATTTCCTCCTGCGTGATGACCTCATCGCCATCTCTGCTGTCTCATTCCACAGCCTCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR GCA 72 bp TCCTCTCCACTGTTTAGAAGGAGGTGTTTCTTCCTCTaGATGGGGAGATGCTGTTTGGCGCCCGCTGGCAGG +
Preference number: 3 (lower is better)
Translates to: SSPLFRRRCFFL*MGRCCLAPAGR
Trigger: CCTGCCAGCGGGCGCCAAACAGCATCTCCCCATGCAGAGGAAGAAACACCTCCTTCTAAACAGTGGAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR CCA 72 bp CTGCCTGACCCGCTGACAGCCAAGCAGAGCTTAGCATaGGCCGAGTCTCAGCCTCTGAATTGGGAAGAATTC +
Preference number: 3 (lower is better)
Translates to: LPDPLTAKQSLA*AESQPLNWEEF
Trigger: GAATTCTTCCCAATTCAGAGGCTGAGACTCGGCCCATGCTAAGCTCTGCTTGGCTGTCAGCGGGTCAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR CAA 90 bp TGCGACCCGGCCGCTCGGCTTCTAGCTGCCTACCCAAAGAACCCCGTGTTATGCTCTCTCCCATGGCCTTaGAATCCACTGTACTTCTTT +
Preference number: 3 (lower is better)
Translates to: CDPAARLLAAYPKNPVLCSLPWP*NPLYFF
Trigger: AAAGAAGTACAGTGGATTCAAAGGCCATGGGAGAGA...GCATAACACGGGGTTCTTTGGGTAGGCAGCTAGAAGCCGAGCGGCCGGGTCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR CAA 90 bp CCCATTACGACTGTGGAGTACAATGCAGTAAAGGAGACGATGCTGCGACCCGGCACCAAGGAAAGAGACTaGGTGAAAGGAAGGGCCGCC +
Preference number: 3 (lower is better)
Translates to: PITTVEYNAVKETMLRPGTKERD*VKGRAA
Trigger: GGCGGCCCTTCCTTTCACCAAGTCTCTTTCCTTGGT...GCCGGGTCGCAGCATCGTCTCCTTTACTGCATTGTACTCCACAGTCGTAATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR CAA 90 bp TTCCTCTGCATGGGGAGATGCTGTTTGGCGCCCGCTGGCAGGACCTGCCTTCCTTATAGGTCAAAGTCATaGTGCTGTGAAAAGCCACGC +
Preference number: 3 (lower is better)
Translates to: FLCMGRCCLAPAGRTCLPYRSKS*CCEKPR
Trigger: GCGTGGCTTTTCACAGCACAATGACTTTGACCTATA...AGGAAGGCAGGTCCTGCCAGCGGGCGCCAAACAGCATCTCCCCATGCAGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR TCA 72 bp GAAACTCAGGCTGCAGGAGGGTGGCTTGTCAGCTGGTaGAGCCACTTGGCTTTGGACTCCATCGGTCATCTT +
Preference number: 3 (lower is better)
Translates to: ETQAAGGWLVSW*SHLALDSIGHL
Trigger: AAGATGACCGATGGAGTCCAAAGCCAAGTGGCTTCACCAGCTGACAAGCCACCCTCCTGCAGCCTGAGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR GCA 72 bp AAAATCAGGTTTCCGCGGCACTGTGCTCCAGCCATGTaGCCTGGTGTCACTGTCGGTGGTGCCAATAGTTCA +
Preference number: 3 (lower is better)
Translates to: KIRFPRHCAPAM*PGVTVGGANSS
Trigger: TGAACTATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCCGCGGAAACCTGATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR GCA 72 bp CAACATCTCAGTCAGAAAACCACCTCCCACCACCTGTaGTGTGCCACAGGGCATGATCCTGACAGCGACATC +
Preference number: 3 (lower is better)
Translates to: QHLSQKTTSHHL*CATGHDPDSDI
Trigger: GATGTCGCTGTCAGGATCATGCCCTGTGGCACAGCACAGGTGGTGGGAGGTGGTTTTCTGACTGAGATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR CCA 72 bp GGAAGCCAGACAGTGCTGCTCTGGGCTGTCAGGGAGTaGATGTCCAGGCAACGCCACAGGATAATGCTTTTT +
Preference number: 3 (lower is better)
Translates to: GSQTVLLWAVRE*MSRQRHRIMLF
Trigger: AAAAAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGCACTGTCTGGCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR CCA 72 bp CTGAAACAGTCTTATCTCATCTGTCCACTGCTGCTCTaGAAGGGTCAGGACCAGCACTGCAGACACTCGGCC +
Preference number: 3 (lower is better)
Translates to: LKQSYLICPLLL*KGQDQHCRHSA
Trigger: GGCCGAGTGTCTGCAGTGCTGGTCCTGACCCTTCCAGAGCAGCAGTGGACAGATGAGATAAGACTGTTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR CCA 72 bp CTGCAGGAGGGTGGCTTGTCAGCTGGTGAAGCCACTTaGCTTTGGACTCCATCGGTCATCTTTACGCAAGAG +
Preference number: 3 (lower is better)
Translates to: LQEGGLSAGEAT*LWTPSVIFTQE
Trigger: CTCTTGCGTAAAGATGACCGATGGAGTCCAAAGCCAAGTGGCTTCACCAGCTGACAAGCCACCCTCCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR CCA 72 bp GCATCGCTGGGCTACAGAAGTGGCCTCTGGGGAATCTaGAGTATGTTCAGCCTGCCGACCGATAACTACGTT +
Preference number: 3 (lower is better)
Translates to: ASLGYRSGLWGI*SMFSLPTDNYV
Trigger: AACGTAGTTATCGGTCGGCAGGCTGAACATACTCCAGATTCCCCAGAGGCCACTTCTGTAGCCCAGCGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CAA 90 bp ACCTCCCACCACCTGTGCTGTGCCACAGGGCATGATCCTGACAGCGACATCACAAAGTTAACAGTTTCCTaGGACAGTGCCATCCTCAGG +
Preference number: 3 (lower is better)
Translates to: TSHHLCCATGHDPDSDITKLTVS*DSAILR
Trigger: CCTGAGGATGGCACTGTCCAAGGAAACTGTTAACTT...TGTGATGTCGCTGTCAGGATCATGCCCTGTGGCACAGCACAGGTGGTGGGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR-3UTR CAA 90 bp CCCACCTGCAGACACCCTGCTGCCAGAACTCCAACAGGTCCCCGAGGTAGCGAGATGTACCTTCTGAGCTaGTCCTACTATTCAGATGAT +
Preference number: 3 (lower is better)
Translates to: PTCRHPAARTPTGPRGSEMYLLS*SYYSDD
Trigger: ATCATCTGAATAGTAGGACAAGCTCAGAAGGTACAT...CTCGCTACCTCGGGGACCTGTTGGAGTTCTGGCAGCAGGGTGTCTGCAGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CAA 90 bp TTGCCAAGGAGTCTATCGCCTCATCCACAACATCTGCTTGCGGGAGAAACAGCAGGTGGGCTCCAGCTTTaGGAAGCAACCCTACCTAGC +
Preference number: 3 (lower is better)
Translates to: LPRSLSPHPQHLLAGETAGGLQL*EATLPS
Trigger: GCTAGGTAGGGTTGCTTCCAAAAGCTGGAGCCCACC...TGCTGTTTCTCCCGCAAGCAGATGTTGTGGATGAGGCGATAGACTCCTTGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CAA 90 bp CCCACCTGCAGACACCCTGCTGCCAGAACTCCAACAGGTCCCCGAGGTAGCGAGGATCATCAATCTGACTaGAAGCCTTTTACCAGTTAC +
Preference number: 3 (lower is better)
Translates to: PTCRHPAARTPTGPRGSEDHQSD*KPFTSY
Trigger: GTAACTGGTAAAAGGCTTCAAGTCAGATTGATGATC...CTCGCTACCTCGGGGACCTGTTGGAGTTCTGGCAGCAGGGTGTCTGCAGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR TCA 72 bp TCCTGTGGTTTCTGCCTGACCCTTCTAAGCCAGAGGTaGGAAAACAACTCCCAGAGACCACGACTCTCACCC +
Preference number: 3 (lower is better)
Translates to: SCGFCLTLLSQR*ENNSQRPRLSP
Trigger: GGGTGAGAGTCGTGGTCTCTGGGAGTTGTTTTCTCACCTCTGGCTTAGAAGGGTCAGGCAGAAACCACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR TCA 72 bp ATTCAAACACCGCATGACAACGAACCCAGTGGACTGTaGAACTCAGGCTGCAGGAGGGTGGCTTGTCAGCTG +
Preference number: 3 (lower is better)
Translates to: IQTPHDNEPSGL*NSGCRRVACQL
Trigger: CAGCTGACAAGCCACCCTCCTGCAGCCTGAGTTTCACAGTCCACTGGGTTCGTTGTCATGCGGTGTTTGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR TCA 72 bp TCCACCATCTTGTGTCTTCTGGGTCTGGTTGCCTGCTaGAGCAGGGTTAACATTAGGCTCCTGGCTCTGACC +
Preference number: 3 (lower is better)
Translates to: STILCLLGLVAC*SRVNIRLLALT
Trigger: GGTCAGAGCCAGGAGCCTAATGTTAACCCTGCTTCAGCAGGCAACCAGACCCAGAAGACACAAGATGGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR CCA 72 bp GAGGGTGGCTTGTCAGCTGGTGAAGCCACTTGGCTTTaGACTCCATCGGTCATCTTTACGCAAGAGCAGAGA +
Preference number: 3 (lower is better)
Translates to: EGGLSAGEATWL*TPSVIFTQEQR
Trigger: TCTCTGCTCTTGCGTAAAGATGACCGATGGAGTCCAAAGCCAAGTGGCTTCACCAGCTGACAAGCCACCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CAA 90 bp CACTTGGCTTTGGACTCCATCGGTCATCTTTACGCAAGAGCAGAGATGAACGGTGGTGGGCTCCAGCTTTaGGAAGCAACCCTACCTAGC +
Preference number: 3 (lower is better)
Translates to: HLALDSIGHLYARAEMNGGGLQL*EATLPS
Trigger: GCTAGGTAGGGTTGCTTCCAAAAGCTGGAGCCCACC...ACCGTTCATCTCTGCTCTTGCGTAAAGATGACCGATGGAGTCCAAAGCCAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CAA 90 bp GCGATGAGGTCATCACGCAGGAGGAAATCTCACCCACACGAGGTGGACTTACAGCCTGCTTTCCCAATCTaGGGCTGGGGTTTTGACTTT +
Preference number: 3 (lower is better)
Translates to: AMRSSRRRKSHPHEVDLQPAFPI*GWGFDF
Trigger: AAAGTCAAAACCCCAGCCCAAGATTGGGAAAGCAGG...CTGTAAGTCCACCTCGTGTGGGTGAGATTTCCTCCTGCGTGATGACCTCATCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CAA 90 bp CTAGCTGCCTACCCAAAGAACCCCGTGTTATGCGGACGGACCAAGCCAAAGGCTCTTGCCACTGAGTTCTaGAAAGCAGGCTCCAATGAT +
Preference number: 3 (lower is better)
Translates to: LAAYPKNPVLCGRTKPKALATEF*KAGSND
Trigger: ATCATTGGAGCCTGCTTTCAAGAACTCAGTGGCAAG...AGCCTTTGGCTTGGTCCGTCCGCATAACACGGGGTTCTTTGGGTAGGCAGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR TCA 72 bp AAAAATAGAGGAACCACCCCTGCAGCCACGAAATGCTaGGAGCAGCCGACCCGATTCACACTGTGCTGCTTT +
Preference number: 3 (lower is better)
Translates to: KNRGTTPAATKC*EQPTRFTLCCF
Trigger: AAAGCAGCACAGTGTGAATCGGGTCGGCTGCTCTCAGCATTTCGTGGCTGCAGGGGTGGTTCCTCTATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR CAA 90 bp CTGAAAACTCCTTCTGCATCCCAATCTCTAACCAGGAAAGCAAATGCTATTTACCTGCGGCTCCAGCGCTaGTCCACACACACGCCTGCC +
Preference number: 3 (lower is better)
Translates to: LKTPSASQSLTRKANAIYLRLQR*STHTPA
Trigger: GGCAGGCGTGTGTGTGGACAAGCGCTGGAGCCGCAG...GTAAATAGCATTTGCTTTCCTGGTTAGAGATTGGGATGCAGAAGGAGTTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CAA 90 bp CTAGCTGCCTACCCAAAGAACCCCGTGTTATGCGGACGGACCAAGCCAAAGGCTACTGTAAAGGCCTTCTaGGTCATCAGTGCTGATGTT +
Preference number: 3 (lower is better)
Translates to: LAAYPKNPVLCGRTKPKATVKAF*VISADV
Trigger: AACATCAGCACTGATGACCAAGAAGGCCTTTACAGT...AGCCTTTGGCTTGGTCCGTCCGCATAACACGGGGTTCTTTGGGTAGGCAGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR CAA 90 bp GCGATGAGGTCATCACGCAGGAGGAAATCTCACCCACACGAGGTGGACTTACAGTTCACATACATACTCTaGGACTATGGGGACCAAGTC +
Preference number: 3 (lower is better)
Translates to: AMRSSRRRKSHPHEVDLQFTYIL*DYGDQV
Trigger: GACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAA...CTGTAAGTCCACCTCGTGTGGGTGAGATTTCCTCCTGCGTGATGACCTCATCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CAA 90 bp TGTTTCATTCTGACCATTCTGACTCTGCCCAGAACGCCGTCCCACCTGCAGACAAAGACACACGGATGCTaGCCTAAAATATCTGCCGAG +
Preference number: 3 (lower is better)
Translates to: CFILTILTLPRTPSHLQTKTHGC*PKISAE
Trigger: CTCGGCAGATATTTTAGGCAAGCATCCGTGTGTCTT...TGTCTGCAGGTGGGACGGCGTTCTGGGCAGAGTCAGAATGGTCAGAATGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR TCA 72 bp TGGACTCCATCGGTCATCTTTACGCAAGAGCAGAGATaGACGGTGGGTCACGGCTATGACGTGAAGGAGAAA +
Preference number: 3 (lower is better)
Translates to: WTPSVIFTQEQR*TVGHGYDVKEK
Trigger: TTTCTCCTTCACGTCATAGCCGTGACCCACCGTTCATCTCTGCTCTTGCGTAAAGATGACCGATGGAGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR GCA 72 bp TCTTGCCAAGGAGTCTATCGCCTCATCCACAACATCTaGTTGCGGGAGAAACAGCAAATGTGTCCCTCTGAG +
Preference number: 3 (lower is better)
Translates to: SCQGVYRLIHNI*LREKQQMCPSE
Trigger: CTCAGAGGGACACATTTGCTGTTTCTCCCGCAAGCAGATGTTGTGGATGAGGCGATAGACTCCTTGGCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR GCA 72 bp TTCCGAGCAGGGAGGTTTCATCACACCTTTCGTTCTTaGCAAGGAGTCTATCGCCTCATCCACAACATCTGC +
Preference number: 3 (lower is better)
Translates to: FRAGRFHHTFRS*QGVYRLIHNIC
Trigger: GCAGATGTTGTGGATGAGGCGATAGACTCCTTGGCAAGAACGAAAGGTGTGATGAAACCTCCCTGCTCGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR GCA 72 bp CATCTTTCACACAGCTGCTGGGAGAAAACGCTGCAATaGACCAAAGCCTTTAGCCGGTGTACCCAGAATGAG +
Preference number: 3 (lower is better)
Translates to: HLSHSCWEKTLQ*TKAFSRCTQNE
Trigger: CTCATTCTGGGTACACCGGCTAAAGGCTTTGGTGCATTGCAGCGTTTTCTCCCAGCAGCTGTGTGAAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR GCA 72 bp GCCAGAATGCATCTGCAATTCCAACAGGCATCGCTATaGTCTTCCTTGGTCTGTAAGGACTGGATGCCTGGA +
Preference number: 3 (lower is better)
Translates to: ARMHLQFQQASL*SSLVCKDWMPG
Trigger: TCCAGGCATCCAGTCCTTACAGACCAAGGAAGAGCATAGCGATGCCTGTTGGAATTGCAGATGCATTCTGGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR GCA 72 bp AATGTTTCAGGACGGGGGAGAAGGCCAGAATGCATCTaGAATTCCAACAGGCATCGCTATGCTCTTCCTTGG +
Preference number: 3 (lower is better)
Translates to: NVSGRGRRPECI*NSNRHRYALPW
Trigger: CCAAGGAAGAGCATAGCGATGCCTGTTGGAATTGCAGATGCATTCTGGCCTTCTCCCCCGTCCTGAAACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CAA 90 bp TGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTTTTGAAAAGTTAACAGTTTCCTaGGACAGTGCCATCCTCAGG +
Preference number: 3 (lower is better)
Translates to: WAVREWMSRQRHRIMLFEKLTVS*DSAILR
Trigger: CCTGAGGATGGCACTGTCCAAGGAAACTGTTAACTT...TTCAAAAAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR-3UTR CAA 90 bp GCGATGAGGTCATCACGCAGGAGGAAATCTCACCCACACGAGGTGGACTTACAGAACTGGGTTTTGACTTaGCTTTCCAAAGTCACCTGT +
Preference number: 3 (lower is better)
Translates to: AMRSSRRRKSHPHEVDLQNWVLT*LSKVTC
Trigger: ACAGGTGACTTTGGAAAGCAAAGTCAAAACCCAGTT...CTGTAAGTCCACCTCGTGTGGGTGAGATTTCCTCCTGCGTGATGACCTCATCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CAA 90 bp AATAGAGAGTCCTTCCACAAGCCATATTCAGTCGTGCCCTCCTCGGTGGACTCTAGACTTTCCACCATCTaGTGTCTTCTGGGTCTGGTT +
Preference number: 3 (lower is better)
Translates to: NRESFHKPYSVVPSSVDSRLSTI*CLLGLV
Trigger: AACCAGACCCAGAAGACACAAGATGGTGGAAAGTCT...AGAGTCCACCGAGGAGGGCACGACTGAATATGGCTTGTGGAAGGACTCTCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR TCA 72 bp TACGCAAGAGCAGAGATGAACGGTGGGTCACGGCTATaGCGTGAAGGAGAAAGAGAAGACACACTCACAGAA +
Preference number: 3 (lower is better)
Translates to: YARAEMNGGSRL*REGEREDTLTE
Trigger: TTCTGTGAGTGTGTCTTCTCTTTCTCCTTCACGTCATAGCCGTGACCCACCGTTCATCTCTGCTCTTGCGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR CCA 72 bp GGAATTTATACCCCGTTAGAACAAAGAAGACCAGTGTaGCCGTTTCATCCAGGAGCTGGTAGAGCCACTTCC +
Preference number: 3 (lower is better)
Translates to: GIYTPLEQRRPV*PFHPGAGRATS
Trigger: GGAAGTGGCTCTACCAGCTCCTGGATGAAACGGCCACACTGGTCTTCTTTGTTCTAACGGGGTATAAATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR CAA 90 bp CACTTGGCTTTGGACTCCATCGGTCATCTTTACGCAAGAGCAGAGATGAACGGTAAGTTAACAGTTTCCTaGGACAGTGCCATCCTCAGG +
Preference number: 3 (lower is better)
Translates to: HLALDSIGHLYARAEMNGKLTVS*DSAILR
Trigger: CCTGAGGATGGCACTGTCCAAGGAAACTGTTAACTT...ACCGTTCATCTCTGCTCTTGCGTAAAGATGACCGATGGAGTCCAAAGCCAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR TCA 72 bp GCAACACGGCAAGAGAATTCACCCCGTACATCACCATaGTCGGATCCCCCACCCATTATACGTTGTATGTTT +
Preference number: 3 (lower is better)
Translates to: ATRQENSPRTSP*SDPPPIIRCMF
Trigger: AAACATACAACGTATAATGGGTGGGGGATCCGATCATGGTGATGTACGGGGTGAATTCTCTTGCCGTGTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR GCA 72 bp CAGGTGGTGACAAGTATTAGCGTCAACTCAGGTAGATaGCTTTTAAAAACGCCCTGCCAGAAACACCCTAGG +
Preference number: 3 (lower is better)
Translates to: QVVTSISVNSGR*LLKTPCQKHPR
Trigger: CCTAGGGTGTTTCTGGCAGGGCGTTTTTAAAAGGCATCTACCTGAGTTGACGCTAATACTTGTCACCACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR CCA 72 bp GGGCAGGAATCCTGGGGCAGGTGCTACATCCTAAACTaGGTTTTGACTTTGCTTTCCAAAGTCACCTGTTTT +
Preference number: 3 (lower is better)
Translates to: GQESWGRCYILN*VLTLLSKVTCF
Trigger: AAAACAGGTGACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR CCA 72 bp CTTTTAGACTTTCCACCATCTTGTGTCTTCTGGGTCTaGTTGCCTGCTGAAGCAGGGTTAACATTAGGCTCC +
Preference number: 3 (lower is better)
Translates to: LLDFPPSCVFWV*LPAEAGLTLGS
Trigger: GGAGCCTAATGTTAACCCTGCTTCAGCAGGCAACCAGACCCAGAAGACACAAGATGGTGGAAAGTCTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR CAA 90 bp TTGCAAAACCCAGCATGTGAAATGAGGACACCTCCACGGAGACCCTTCCGAGCATGTTTTCGTTCATTTTaGTCTCCCAAACAGGCAATG +
Preference number: 3 (lower is better)
Translates to: LQNPACEMRTPPRRPFRACFRSF*SPKQAM
Trigger: CATTGCCTGTTTGGGAGACAAAAATGAACGAAAACA...TGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATTTCACATGCTGGGTTTTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CAA 90 bp TGTTTCATTCTGACCATTCTGACTCTGCCCAGAACGCCGTCCCACCTGCAGACAATCCTAAACTGGGTTTaGACTTTGCTTTCCAAAGTC +
Preference number: 3 (lower is better)
Translates to: CFILTILTLPRTPSHLQTILNWV*TLLSKV
Trigger: GACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGAT...TGTCTGCAGGTGGGACGGCGTTCTGGGCAGAGTCAGAATGGTCAGAATGAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CAA 90 bp TGTGCCTCTTCAACCAACAGACACTTGCTCAGATCCTGCCACTTCTGGGAAAGGTGTAGTGGTAGTCAATaGCATGGAACACCAAGGAAA +
Preference number: 3 (lower is better)
Translates to: CASSTNRHLLRSCHFWERCSGSQ*HGTPRK
Trigger: TTTCCTTGGTGTTCCATGCAATTGACTACCACTACA...CCTTTCCCAGAAGTGGCAGGATCTGAGCAAGTGTCTGTTGGTTGAAGAGGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR CAA 90 bp CCCATTACGACTGTGGAGTACAATGCAGTAAAGGAGACGATGCTGCGACCCGGCTCATCAAACACAGCATaGACCTGGCTTATCAAATTT +
Preference number: 3 (lower is better)
Translates to: PITTVEYNAVKETMLRPGSSNTA*TWLIKF
Trigger: AAATTTGATAAGCCAGGTCAATGCTGTGTTTGATGA...GCCGGGTCGCAGCATCGTCTCCTTTACTGCATTGTACTCCACAGTCGTAATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR CAA 90 bp CCCAGAATGAGCCTATGTGGGATCAATAGGCACGGGGAGAAAGATGGCAGAGAAATCCTAAACTGGGTTTaGACTTTGCTTTCCAAAGTC +
Preference number: 3 (lower is better)
Translates to: PRMSLCGINRHGEKDGREILNWV*TLLSKV
Trigger: GACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGAT...TTCTCTGCCATCTTTCTCCCCGTGCCTATTGATCCCACATAGGCTCATTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CAA 90 bp TGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTTTTGAAATCCTAAACTGGGTTTaGACTTTGCTTTCCAAAGTC +
Preference number: 3 (lower is better)
Translates to: WAVREWMSRQRHRIMLFEILNWV*TLLSKV
Trigger: GACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGAT...TTCAAAAAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
3UTR TCA 72 bp AACTCAACTGACTCAGGCCATGAGCATCTTTTACACTaGAGCAAGCATCTCCTCACAAGTGCCTCCTACAAG +
Preference number: 3 (lower is better)
Translates to: NSTDSGHEHLLH*SKHLLTSASYK
Trigger: CTTGTAGGAGGCACTTGTGAGGAGATGCTTGCTTCAGTGTAAAAGATGCTCATGGCCTGAGTCAGTTGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR GCA 72 bp AAAGAAAATGTTTCAGGACGGGGGAGAAGGCCAGAATaGATCTGCAATTCCAACAGGCATCGCTATGCTCTT +
Preference number: 3 (lower is better)
Translates to: KENVSGRGRRPE*ICNSNRHRYAL
Trigger: AAGAGCATAGCGATGCCTGTTGGAATTGCAGATGCATTCTGGCCTTCTCCCCCGTCCTGAAACATTTTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR GCA 72 bp TCCTTCTGCATCCCAATCTCTAACCAGGAAAGCAAATaGTATTTACAGACCTGCAAGCCCTCCCTCAAACGA +
Preference number: 3 (lower is better)
Translates to: SFCIPISNQESK*YLQTCKPSLKR
Trigger: TCGTTTGAGGGAGGGCTTGCAGGTCTGTAAATAGCATTTGCTTTCCTGGTTAGAGATTGGGATGCAGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR CCA 72 bp CAGGCATCGCTATGCTCTTCCTTGGTCTGTAAGGACTaGATGCCTGGAGTAGACTGTTTTAAGTACCAAAAC +
Preference number: 3 (lower is better)
Translates to: QASLCSSLVCKD*MPGVDCFKYQN
Trigger: GTTTTGGTACTTAAAACAGTCTACTCCAGGCATCCAGTCCTTACAGACCAAGGAAGAGCATAGCGATGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR CCA 72 bp AGAGACTTGGTGAAAGGAAGGGCCGCCATCAGCCAGTaGATTTTAAATACATCATTCCGTCGTTTTCGAAGG +
Preference number: 3 (lower is better)
Translates to: RDLVKGRAAISQ*ILNTSFRRFRR
Trigger: CCTTCGAAAACGACGGAATGATGTATTTAAAATCCACTGGCTGATGGCGGCCCTTCCTTTCACCAAGTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR CAA 90 bp CACTTGGCTTTGGACTCCATCGGTCATCTTTACGCAAGAGCAGAGATGAACGGTATGTACCTTCTGAGCTaGTCCTACTATTCAGATGAT +
Preference number: 3 (lower is better)
Translates to: HLALDSIGHLYARAEMNGMYLLS*SYYSDD
Trigger: ATCATCTGAATAGTAGGACAAGCTCAGAAGGTACAT...ACCGTTCATCTCTGCTCTTGCGTAAAGATGACCGATGGAGTCCAAAGCCAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR TCA 72 bp CATGTCCAGGGCGGGGAAACCCTGGATATTTCACTCTaGAGTGGTTTCTTGAAAGAAAACTCAACTGACTCA +
Preference number: 3 (lower is better)
Translates to: HVQGGETLDISL*SGFLKENSTDS
Trigger: TGAGTCAGTTGAGTTTTCTTTCAAGAAACCACTTCAGAGTGAAATATCCAGGGTTTCCCCGCCCTGGACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR CCA 72 bp AGACATGGCCAGATGACCTGCTTGTTAGGAAGGCTGTaGCCATCTTTGTTTCTGAAACAGTCTTATCTCATC +
Preference number: 3 (lower is better)
Translates to: RHGQMTCLLGRL*PSLFLKQSYLI
Trigger: GATGAGATAAGACTGTTTCAGAAACAAAGATGGCCACAGCCTTCCTAACAAGCAGGTCATCTGGCCATGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR TCA 72 bp AGGGAAGGACTGAGGAGGGCTTTGGTAGTCACAGATTaGGACACATTTCTGCGAAAACTGGTATTATGTTTC +
Preference number: 3 (lower is better)
Translates to: REGLRRALVVTD*DTFLRKLVLCF
Trigger: GAAACATAATACCAGTTTTCGCAGAAATGTGTCTCAATCTGTGACTACCAAAGCCCTCCTCAGTCCTTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR TCA 72 bp TTAAATTTTAAAGCACTGAGGGACCAAGAAATGGGCTaGTCAAGTCCTTGGCCACTCACTGTTAAGAGCCAG +
Preference number: 3 (lower is better)
Translates to: LNFKALRDQEMG*SSPWPLTVKSQ
Trigger: CTGGCTCTTAACAGTGAGTGGCCAAGGACTTGATCAGCCCATTTCTTGGTCCCTCAGTGCTTTAAAATTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR TCA 72 bp GAAAAGCCACGCAGTTATCTGACGATAGAGGATGTCTaGGGATCATTAGCAGACTTAGAGATGACTCAGAAG +
Preference number: 3 (lower is better)
Translates to: EKPRSYLTIEDV*GSLADLEMTQK
Trigger: CTTCTGAGTCATCTCTAAGTCTGCTAATGATCCTCAGACATCCTCTATCGTCAGATAACTGCGTGGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR GCA 72 bp CCCCTATTAGTGCTCAGATATAGGTCAAAGTCATTGTaGTGTGAAAAGCCACGCAGTTATCTGACGATAGAG +
Preference number: 3 (lower is better)
Translates to: PLLVLRYRSKSL*CEKPRSYLTIE
Trigger: CTCTATCGTCAGATAACTGCGTGGCTTTTCACAGCACAATGACTTTGACCTATATCTGAGCACTAATAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR-3UTR CAA 90 bp CTGAAAACTCCTTCTGCATCCCAATCTCTAACCAGGAAAGCAAATGCTATTTACAAGACACACGGATGCTaGCCTAAAATATCTGCCGAG +
Preference number: 3 (lower is better)
Translates to: LKTPSASQSLTRKANAIYKTHGC*PKISAE
Trigger: CTCGGCAGATATTTTAGGCAAGCATCCGTGTGTCTT...GTAAATAGCATTTGCTTTCCTGGTTAGAGATTGGGATGCAGAAGGAGTTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CAA 90 bp TGCCTCCTACAAGTCACTAGAGTCATATTCAACATTACAAAATGCAGTGCTACTCCTGCTTTCCCAATCTaGGGCTGGGGTTTTGACTTT +
Preference number: 3 (lower is better)
Translates to: CLLQVTRVIFNITKCSATPAFPI*GWGFDF
Trigger: AAAGTCAAAACCCCAGCCCAAGATTGGGAAAGCAGG...AGTAGCACTGCATTTTGTAATGTTGAATATGACTCTAGTGACTTGTAGGAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR TCA 72 bp GGTCTCCTTTTAAGCCCTCAGTCACAATGTACCTTCTaGGCTTGTCCTACTATTCAGATGATTTTCTCTCTG +
Preference number: 3 (lower is better)
Translates to: GLLLSPQSQCTF*ACPTIQMIFSL
Trigger: CAGAGAGAAAATCATCTGAATAGTAGGACAAGCTCAGAAGGTACATTGTGACTGAGGGCTTAAAAGGAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CAA 90 bp CTTCTTCCTGAGAAAGTTGTAGGTAGGGGTTATCTGAAGCCGGACGGAATTTATCAGCTTTTCCATCTGTaGCTGATGCTTCTTGTAAAT +
Preference number: 3 (lower is better)
Translates to: LLPEKVVGRGYLKPDGIYQLFHL*LMLLVN
Trigger: ATTTACAAGAAGCATCAGCAACAGATGGAAAAGCTG...ATAAATTCCGTCCGGCTTCAGATAACCCCTACCTACAACTTTCTCAGGAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493417.5
3UTR GCA 72 bp GCATCTTTTACACTGAAGCAAGCATCTCCTCACAAGTaGCTCCTACAAGTCACTAGAGTCATATTCAACATT +
Preference number: 3 (lower is better)
Translates to: ASFTLKQASPHK*LLQVTRVIFNI
Trigger: AATGTTGAATATGACTCTAGTGACTTGTAGGAGGCACTTGTGAGGAGATGCTTGCTTCAGTGTAAAAGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR-3UTR CAA 90 bp GAGGGCTTTGGTAGTCACAGATTGAGACACATTTCTGCGAAAACTGGTATTATGATGGGGATGATTTGCTaGGACTTAAGTATTTGCTTA +
Preference number: 3 (lower is better)
Translates to: EGFGSHRLRHISAKTGIMMGMIC*DLSICL
Trigger: TAAGCAAATACTTAAGTCCAAGCAAATCATCCCCAT...CATAATACCAGTTTTCGCAGAAATGTGTCTCAATCTGTGACTACCAAAGCCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR TCA 72 bp ACATACATACTCTTGGACTATGGGGACCAAGTCTGTTaGATTCATCTATTTAGAAATCCTACTAGCCTACAG +
Preference number: 3 (lower is better)
Translates to: TYILLDYGDQVC*IHLFRNPTSLQ
Trigger: CTGTAGGCTAGTAGGATTTCTAAATAGATGAATTCAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR TCA 72 bp TTCAAGCTCTGGAAGTGTGGAAGGGAACTTAATCATTaGGTTTCTGTGAAGTATTTTGCCATCCTAAAATCC +
Preference number: 3 (lower is better)
Translates to: FKLWKCGRELNH*VSVKYFAILKS
Trigger: GGATTTTAGGATGGCAAAATACTTCACAGAAACTCAATGATTAAGTTCCCTTCCACACTTCCAGAGCTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR TCA 72 bp AGAGGAAACATGGATATTTTGCGTAGGCAGAAACAGTaGGGAGTACAAAGCAAAGCTATAAATACCACCAAT +
Preference number: 3 (lower is better)
Translates to: RGNMDILRRQKQ*GVQSKAINTTN
Trigger: ATTGGTGGTATTTATAGCTTTGCTTTGTACTCCTCACTGTTTCTGCCTACGCAAAATATCCATGTTTCCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR CCA 72 bp GTTGAATCATGCTCACTTTCTTCACATACATACTCTTaGACTATGGGGACCAAGTCTGTTGAATTCATCTAT +
Preference number: 3 (lower is better)
Translates to: VESCSLSSHTYS*TMGTKSVEFIY
Trigger: ATAGATGAATTCAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGAGCATGATTCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp GACAGTGCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATGTTCCCGTGCCAGTCTaGGGGCTGCGGCTCCAGCGC +
Preference number: 4 (lower is better)
Translates to: DSAALGCQGVDVQATPQDVPVPV*GLRLQR
Trigger: GCGCTGGAGCCGCAGCCCTCAGACTGGCACGGGAAC...ATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGCACTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp AATGAGGACACCTCCACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTCGCCCACGTCCGGGGTaGAAGGGCGCAGCCGCCGGA +
Preference number: 4 (lower is better)
Translates to: NEDTSTETLPSREVSSHLRPRPG*KGAAAG
Trigger: TCCGGCGGCTGCGCCCTTTCACCCCGGACGTGGGCG...AAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTTCGTTCTTGCCAAGCGCCCACGTCCGGGGTaGAAGGGCGCAGCCGCCGGA +
Preference number: 4 (lower is better)
Translates to: HGDPSEQGGFITPFVLAKRPRPG*KGAAAG
Trigger: TCCGGCGGCTGCGCCCTTTCACCCCGGACGTGGGCG...CTTGGCAAGAACGAAAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp GGCGCCCGCTGGCAGGACCTGCCTTCCTTTACTGTTGCCGTGGAGCTGAGCAGACTGTCCCATGCTGCCTaGCCCGCTGACAGCCAAGCA +
Preference number: 4 (lower is better)
Translates to: GARWQDLPSFTVAVELSRLSHAA*PADSQA
Trigger: TGCTTGGCTGTCAGCGGGTCAGGCAGCATGGGACAG...TCTGCTCAGCTCCACGGCAACAGTAAAGGAAGGCAGGTCCTGCCAGCGGGCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR CCA 90 bp TGCGACCCGGCCGCTCGGCTTCTAGCTGCCTACCCAAAGAACCCCGTGTTATGCCAGCAAACCCAGCATTaGGAGCAGCCGGAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: CDPAARLLAAYPKNPVLCQQTQH*EQPEAR
Trigger: GCGGGCCTCCGGCTGCTCCCAATGCTGGGTTTGCTG...GCATAACACGGGGTTCTTTGGGTAGGCAGCTAGAAGCCGAGCGGCCGGGTCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR TCA 90 bp CATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCACCAGCGTTCCCGTGCCAGTCTaGGGGCTGCGGCTCCAGCGC +
Preference number: 4 (lower is better)
Translates to: HFLKHQTDTSHPPSPSTSVPVPV*GLRLQR
Trigger: GCGCTGGAGCCGCAGCCCTCAGACTGGCACGGGAAC...GCTGGTGGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CCGCGGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATCTGGGCCTCAGGAGCTaGTGTCCTGGTCACTCTCAG +
Preference number: 4 (lower is better)
Translates to: PRHCAPAMCPGVTVGGANLGLRS*CPGHSQ
Trigger: CTGAGAGTGACCAGGACAGCAGCTCCTGAGGCCCAG...ATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCCGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp GTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGACGCTGGCGTTCCCGTaGCAGTCTGAGGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: VLVTLSIWNKGLGQSRGQTLAFP*QSEGCG
Trigger: GCCGCAGCCCTCAGACTGGCACGGGAACGCCAGCGT...CTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGCCTTCCCACTCGCCCTaGGGCTCCACGGAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: SWSLSASGIRVWGKAEGRPSHSP*GSTEPL
Trigger: CAACGGCTCCGTGGAGCCCCAGGGCGAGTGGGAAGG...CCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp CCGCGGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATGCCTCACATCATCCTTaGGTGCCAGGTGATGGACGC +
Preference number: 4 (lower is better)
Translates to: PRHCAPAMCPGVTVGGANASHHP*VPGDGR
Trigger: GCGTCCATCACCTGGCACTCAAGGATGATGTGAGGC...ATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCCGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp GACAGTGCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATCGGCCATGCTGTGAGTaGGCCCAGACATACGCGTGG +
Preference number: 4 (lower is better)
Translates to: DSAALGCQGVDVQATPQDRPCCE*AQTYAW
Trigger: CCACGCGTATGTCTGGGCTCACTCACAGCATGGCCG...ATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGCACTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp GTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGCCCTCACACAGGGCCTaGGATGTGTGGGGCCCATGG +
Preference number: 4 (lower is better)
Translates to: VLVTLSIWNKGLGQSRGQPSHRA*DVWGPW
Trigger: CCATGGGCCCCACACATCTCAGGCCCTGTGTGAGGG...CTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGCCCTCACACAGGGCCTaGGATGTGTGGGGCCCATGG +
Preference number: 4 (lower is better)
Translates to: SWSLSASGIRVWGKAEGRPSHRA*DVWGPW
Trigger: CCATGGGCCCCACACATCTCAGGCCCTGTGTGAGGG...CCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CCGCGGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATCCCCGTACATCACCATaGTCGGATCCCCCACCCATT +
Preference number: 4 (lower is better)
Translates to: PRHCAPAMCPGVTVGGANPRTSP*SDPPPI
Trigger: AATGGGTGGGGGATCCGATCATGGTGATGTACGGGG...ATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCCGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp GGCGCCCGCTGGCAGGACCTGCCTTCCTTTACTGTTGCCGTGGAGCTGAGCAGACACATCATCCTTGAGTaGCAGGTGATGGACGCGGCC +
Preference number: 4 (lower is better)
Translates to: GARWQDLPSFTVAVELSRHIILE*QVMDAA
Trigger: GGCCGCGTCCATCACCTGGCACTCAAGGATGATGTG...TCTGCTCAGCTCCACGGCAACAGTAAAGGAAGGCAGGTCCTGCCAGCGGGCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR GCA 90 bp CCGCGGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATGAAGCCAGACAGTGCTaGTCTGGGCTGTCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: PRHCAPAMCPGVTVGGANEARQC*SGLSGS
Trigger: ACTCCCTGACAGCCCAGAGCAGCACTGTCTGGCTTC...ATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCCGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp CTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTTCGTCGAGGAGCCTGTaGTGCCCACCTCGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LLWAVREWMSRQRHRIMLSSRSL*CPPRGP
Trigger: AGGGCCCCGAGGTGGGCAGCACAGGCTCCTCGACGA...AAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp GCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTCAGCAAACCCAGCATTaGGAGCAGCCGGAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: AALGCQGVDVQATPQDNAQQTQH*EQPEAR
Trigger: GCGGGCCTCCGGCTGCTCCCAATGCTGGGTTTGCTG...AGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp ACCCACACGAGGTGGACTTACAGGGCTGTGTGCTGCCTGGGCAGGCTGGACATGCAGCGGGGTGAAGTGTaGAGTGTGGAAGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: THTRWTYRAVCCLGRLDMQRGEV*SVEAGV
Trigger: CACCCCTGCTTCCACACTCCACACTTCACCCCGCTG...CATGTCCAGCCTGCCCAGGCAGCACACAGCCCTGTAAGTCCACCTCGTGTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp GACAGTGCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATCCTCCCATTCCCGCCTaGAAGAGGATCCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: DSAALGCQGVDVQATPQDPPIPA*KRIQLP
Trigger: AGGCAGCTGGATCCTCTTTCAGGCGGGAATGGGAGG...ATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGCACTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp ACCCACACGAGGTGGACTTACAGGGCTGTGTGCTGCCTGGGCAGGCTGGACATGCAGCAGAGATGGCGATaGGGTCATCACGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: THTRWTYRAVCCLGRLDMQQRWR*GHHAGG
Trigger: TCCTCCTGCGTGATGACCTCATCGCCATCTCTGCTG...CATGTCCAGCCTGCCCAGGCAGCACACAGCCCTGTAAGTCCACCTCGTGTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CCGCGGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATAGAAAAGCAGCGGGGTaGAGTGTGGAGTGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: PRHCAPAMCPGVTVGGANRKAAG*SVECGS
Trigger: GCTTCCACACTCCACACTTCACCCCGCTGCTTTTCT...ATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCCGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp ACCCACACGAGGTGGACTTACAGGGCTGTGTGCTGCCTGGGCAGGCTGGACATGTGTGCTCCAGCCATGTaGCCTGGTGTCACTGTCGGT +
Preference number: 4 (lower is better)
Translates to: THTRWTYRAVCCLGRLDMCAPAM*PGVTVG
Trigger: ACCGACAGTGACACCAGGGCACATGGCTGGAGCACA...CATGTCCAGCCTGCCCAGGCAGCACACAGCCCTGTAAGTCCACCTCGTGTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGGTTTCCGCGGCACTGTaGTCCAGCCATGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SWSLSASGIRVWGKAEGRVSAAL*SSHVPW
Trigger: CCAGGGCACATGGCTGGAGCACAGTGCCGCGGAAAC...CCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp GCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTGTTTCCGCGGCACTGTaGTCCAGCCATGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: AALGCQGVDVQATPQDNAVSAAL*SSHVPW
Trigger: CCAGGGCACATGGCTGGAGCACAGTGCCGCGGAAAC...AGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp CCCACCTGCAGACACCCTGCTGCCAGAACTCCAACAGGTCCCCGAGGTAGCGAGAGGTACCTGTTCCCCTaGAGGTGTGGCTCTCTGACA +
Preference number: 4 (lower is better)
Translates to: PTCRHPAARTPTGPRGSERYLFP*RCGSLT
Trigger: TGTCAGAGAGCCACACCTGCAGGGGAACAGGTACCT...CTCGCTACCTCGGGGACCTGTTGGAGTTCTGGCAGCAGGGTGTCTGCAGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CCCACCTGCAGACACCCTGCTGCCAGAACTCCAACAGGTCCCCGAGGTAGCGAGGTCCACACACACGCCTaGCTCTCTCTAGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PTCRHPAARTPTGPRGSEVHTHA*LSLVPP
Trigger: TGGAGGAACTAGAGAGAGGCAGGCGTGTGTGTGGAC...CTCGCTACCTCGGGGACCTGTTGGAGTTCTGGCAGCAGGGTGTCTGCAGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp GCGATGAGGTCATCACGCAGGAGGAAATCTCACCCACACGAGGTGGACTTACAGACGCTGGCGTTCCCGTaGCAGTCTGAGGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: AMRSSRRRKSHPHEVDLQTLAFP*QSEGCG
Trigger: GCCGCAGCCCTCAGACTGGCACGGGAACGCCAGCGT...CTGTAAGTCCACCTCGTGTGGGTGAGATTTCCTCCTGCGTGATGACCTCATCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTTCGTTCTTGCCAAGACGCTGGCGTTCCCGTaGCAGTCTGAGGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: HGDPSEQGGFITPFVLAKTLAFP*QSEGCG
Trigger: GCCGCAGCCCTCAGACTGGCACGGGAACGCCAGCGT...CTTGGCAAGAACGAAAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CCGCGGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATTGTGTCTTCTGGGTCTaGTTGCCTGCTGAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PRHCAPAMCPGVTVGGANCVFWV*LPAEAG
Trigger: CCCTGCTTCAGCAGGCAACCAGACCCAGAAGACACA...ATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCCGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp AACCACGCAGAGAGGCTCAGATGCATCGCTGGGCTACAGAAGTGGCCTCTGGGGTCCAGCCATGTGCCCTaGTGTCACTGTCGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: NHAERLRCIAGLQKWPLGSSHVP*CHCRWC
Trigger: GCACCACCGACAGTGACACCAGGGCACATGGCTGGA...CCCCAGAGGCCACTTCTGTAGCCCAGCGATGCATCTGAGCCTCTCTGCGTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp ACCCACACGAGGTGGACTTACAGGGCTGTGTGCTGCCTGGGCAGGCTGGACATGTCTGGAATAAGGGTCTaGGGCAAAGCCGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: THTRWTYRAVCCLGRLDMSGIRV*GKAEGR
Trigger: CCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGA...CATGTCCAGCCTGCCCAGGCAGCACACAGCCCTGTAAGTCCACCTCGTGTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp AACCACGCAGAGAGGCTCAGATGCATCGCTGGGCTACAGAAGTGGCCTCTGGGGAGAGGTGAGCAGCTGTaGCCTGGGAAGGCGCTTGCT +
Preference number: 4 (lower is better)
Translates to: NHAERLRCIAGLQKWPLGRGEQL*PGKALA
Trigger: AGCAAGCGCCTTCCCAGGCCACAGCTGCTCACCTCT...CCCCAGAGGCCACTTCTGTAGCCCAGCGATGCATCTGAGCCTCTCTGCGTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp AACCACGCAGAGAGGCTCAGATGCATCGCTGGGCTACAGAAGTGGCCTCTGGGGCTGAACACCCAACGCTaGCGTTCCCGTGCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: NHAERLRCIAGLQKWPLGLNTQR*RSRASL
Trigger: CAGACTGGCACGGGAACGCCAGCGTTGGGTGTTCAG...CCCCAGAGGCCACTTCTGTAGCCCAGCGATGCATCTGAGCCTCTCTGCGTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CCGCGGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATGGTCTGGTTGCCTGCTaGAGCAGGGTTAACATTAGG +
Preference number: 4 (lower is better)
Translates to: PRHCAPAMCPGVTVGGANGLVAC*SRVNIR
Trigger: CCTAATGTTAACCCTGCTTCAGCAGGCAACCAGACC...ATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCCGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp GGCGCCCGCTGGCAGGACCTGCCTTCCTTTACTGTTGCCGTGGAGCTGAGCAGAGGTCTGGTTGCCTGCTaGAGCAGGGTTAACATTAGG +
Preference number: 4 (lower is better)
Translates to: GARWQDLPSFTVAVELSRGLVAC*SRVNIR
Trigger: CCTAATGTTAACCCTGCTTCAGCAGGCAACCAGACC...TCTGCTCAGCTCCACGGCAACAGTAAAGGAAGGCAGGTCCTGCCAGCGGGCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR TCA 90 bp TCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGCCTCCCATTCCCGCCTaGAAGAGGATCCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SWSLSASGIRVWGKAEGRPPIPA*KRIQLP
Trigger: AGGCAGCTGGATCCTCTTTCAGGCGGGAATGGGAGG...CCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp CCGCGGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATGACCAAGAAATGGGCTaGTCAAGTCCTTGGCCACTC +
Preference number: 4 (lower is better)
Translates to: PRHCAPAMCPGVTVGGANDQEMG*SSPWPL
Trigger: GAGTGGCCAAGGACTTGATCAGCCCATTTCTTGGTC...ATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCCGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGACGTGCTCCAAAGGCTaGCCTTCTGGAGGCTCACCG +
Preference number: 4 (lower is better)
Translates to: SWSLSASGIRVWGKAEGRTCSKG*PSGGSP
Trigger: CGGTGAGCCTCCAGAAGGTCAGCCTTTGGAGCACGT...CCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CCGCGGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATGTCAAAGCCCCCATGTaGACACGATTTCTGGACCCT +
Preference number: 4 (lower is better)
Translates to: PRHCAPAMCPGVTVGGANVKAPM*TRFLDP
Trigger: AGGGTCCAGAAATCGTGTTCACATGGGGGCTTTGAC...ATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCCGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp GACAGTGCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAGCCCTTTGGGAGACTaGGGCAGGAGGACAGCTAGA +
Preference number: 4 (lower is better)
Translates to: DSAALGCQGVDVQATPQDSPLGD*GRRTAR
Trigger: TCTAGCTGTCCTCCTGCCTCAGTCTCCCAAAGGGCT...ATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGCACTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372406.5
ENST00000610997.1
CDS-3UTR GCA 90 bp TCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGGGCTCGGCCAGCAACTaGAGCAAACCCAGCATTGGG +
Preference number: 4 (lower is better)
Translates to: SWSLSASGIRVWGKAEGRGSASN*SKPSIG
Trigger: CCCAATGCTGGGTTTGCTGCAGTTGCTGGCCGAGCC...CCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp GACAGTGCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATCACATCATCCTTGAGTaGCAGGTGATGGACGCGGCC +
Preference number: 4 (lower is better)
Translates to: DSAALGCQGVDVQATPQDHIILE*QVMDAA
Trigger: GGCCGCGTCCATCACCTGGCACTCAAGGATGATGTG...ATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGCACTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp ACCCACACGAGGTGGACTTACAGGGCTGTGTGCTGCCTGGGCAGGCTGGACATGTCCACCAGCCGTCCTTaGTACACTTCCCCACACATG +
Preference number: 4 (lower is better)
Translates to: THTRWTYRAVCCLGRLDMSTSRP*YTSPHM
Trigger: CATGTGTGGGGAAGTGTAGCAAGGACGGCTGGTGGA...CATGTCCAGCCTGCCCAGGCAGCACACAGCCCTGTAAGTCCACCTCGTGTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp GTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGAGGGAAGCCAGACAGTaGTGCTCTGGGCTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: VLVTLSIWNKGLGQSRGQREARQ*CSGLSG
Trigger: CCCTGACAGCCCAGAGCAGCACTGTCTGGCTTCCCT...CTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp GTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGCCTGGGAAGGCGCTTaGTCTTCCTCCACATCAGCC +
Preference number: 4 (lower is better)
Translates to: VLVTLSIWNKGLGQSRGQAWEGA*SSSTSA
Trigger: GGCTGATGTGGAGGAAGAGCAAGCGCCTTCCCAGGC...CTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTTGCCAGTCTGAGGGCTaGGGCTCCAGCGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LLWAVREWMSRQRHRIMLCQSEG*GSSACP
Trigger: TGGACAAGCGCTGGAGCCGCAGCCCTCAGACTGGCA...AAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTGAACGCCGTCCCACCTaGAGACACCCTGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: LLWAVREWMSRQRHRIMLERRPT*RHPAAR
Trigger: TCTGGCAGCAGGGTGTCTGCAGGTGGGACGGCGTTC...AAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TTCCTCTGCATGGGGAGATGCTGTTTGGCGCCCGCTGGCAGGACCTGCCTTCCTTGTGTCTTCTGGGTCTaGTTGCCTGCTGAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: FLCMGRCCLAPAGRTCLPCVFWV*LPAEAG
Trigger: CCCTGCTTCAGCAGGCAACCAGACCCAGAAGACACA...AGGAAGGCAGGTCCTGCCAGCGGGCGCCAAACAGCATCTCCCCATGCAGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR CCA 90 bp TTGCAAAACCCAGCATGTGAAATGAGGACACCTCCACGGAGACCCTTCCGAGCACCTTCCCACTCGCCCTaGGGCTCCACGGAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: LQNPACEMRTPPRRPFRAPSHSP*GSTEPL
Trigger: CAACGGCTCCGTGGAGCCCCAGGGCGAGTGGGAAGG...TGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATTTCACATGCTGGGTTTTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp GACAGTGCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATCTCCCAAACAGGCAATaGCACTCTCCCCGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: DSAALGCQGVDVQATPQDLPNRQ*HSPRPS
Trigger: AGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGAG...ATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGCACTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp ACCTCCCACCACCTGTGCTGTGCCACAGGGCATGATCCTGACAGCGACATCACATGGGCTGTCAGGGAGTaGATGTCCAGGCAACGCCAC +
Preference number: 4 (lower is better)
Translates to: TSHHLCCATGHDPDSDITWAVRE*MSRQRH
Trigger: GTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCA...TGTGATGTCGCTGTCAGGATCATGCCCTGTGGCACAGCACAGGTGGTGGGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp GCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGTGGGCTGTCAGGGAGTaGATGTCCAGGCAACGCCAC +
Preference number: 4 (lower is better)
Translates to: AVLVTLSIWNKGLGQSRGWAVRE*MSRQRH
Trigger: GTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCA...CCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp CCGTCCTTGCTACACTTCCCCACACATGGGGTCACAACTGCATACACCTTAGAGGCTGCCTGGGCAGGCTaGACATGTCCAGGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: PSLLHFPTHGVTTAYTLEAAWAG*TCPGRG
Trigger: TCCCCGCCCTGGACATGTCCAGCCTGCCCAGGCAGC...CTCTAAGGTGTATGCAGTTGTGACCCCATGTGTGGGGAAGTGTAGCAAGGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp ACCCACACGAGGTGGACTTACAGGGCTGTGTGCTGCCTGGGCAGGCTGGACATGGCTCAGATGCATCGCTaGGCTACAGAAGTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: THTRWTYRAVCCLGRLDMAQMHR*ATEVAS
Trigger: AGAGGCCACTTCTGTAGCCCAGCGATGCATCTGAGC...CATGTCCAGCCTGCCCAGGCAGCACACAGCCCTGTAAGTCCACCTCGTGTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp AGTAGACATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCTCCTTGAGTGCCAGGTaGTGGACGCGGCCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SRHFLKHQTDTSHPPSPSSLSAR*WTRPRP
Trigger: TGGCCTGGGCCGCGTCCATCACCTGGCACTCAAGGA...GGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATGTCTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp CCGTCCTTGCTACACTTCCCCACACATGGGGTCACAACTGCATACACCTTAGAGTCCTTGAGTGCCAGGTaGTGGACGCGGCCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: PSLLHFPTHGVTTAYTLESLSAR*WTRPRP
Trigger: TGGCCTGGGCCGCGTCCATCACCTGGCACTCAAGGA...CTCTAAGGTGTATGCAGTTGTGACCCCATGTGTGGGGAAGTGTAGCAAGGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp ACCCACACGAGGTGGACTTACAGGGCTGTGTGCTGCCTGGGCAGGCTGGACATGTTAGGCTCCTGGCTCTaGCCAAGGACTTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: THTRWTYRAVCCLGRLDMLGSWL*PRTFSS
Trigger: GGATGAGAAAGTCCTTGGTCAGAGCCAGGAGCCTAA...CATGTCCAGCCTGCCCAGGCAGCACACAGCCCTGTAAGTCCACCTCGTGTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TGCGACCCGGCCGCTCGGCTTCTAGCTGCCTACCCAAAGAACCCCGTGTTATGCTTAGGCTCCTGGCTCTaGCCAAGGACTTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: CDPAARLLAAYPKNPVLCLGSWL*PRTFSS
Trigger: GGATGAGAAAGTCCTTGGTCAGAGCCAGGAGCCTAA...GCATAACACGGGGTTCTTTGGGTAGGCAGCTAGAAGCCGAGCGGCCGGGTCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR TCA 90 bp CTGCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGCACTCGGCCATGCTGTaGGTGAGCCCAGACATACGC +
Preference number: 4 (lower is better)
Translates to: LLSWSLSASGIRVWGKAEHSAML*VSPDIR
Trigger: GCGTATGTCTGGGCTCACTCACAGCATGGCCGAGTG...CTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp GCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGGAACCCAGTGGACTGTaGAACTCAGGCTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: AVLVTLSIWNKGLGQSRGEPSGL*NSGCRR
Trigger: CCTCCTGCAGCCTGAGTTTCACAGTCCACTGGGTTC...CCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp GCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTGAACCCAGTGGACTGTaGAACTCAGGCTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: AALGCQGVDVQATPQDNAEPSGL*NSGCRR
Trigger: CCTCCTGCAGCCTGAGTTTCACAGTCCACTGGGTTC...AGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CCGCGGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATCCGGTGTACCCAGAATaGGCCTATGTGGGATCAATA +
Preference number: 4 (lower is better)
Translates to: PRHCAPAMCPGVTVGGANPVYPE*AYVGSI
Trigger: TATTGATCCCACATAGGCTCATTCTGGGTACACCGG...ATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCCGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CCCACCTGCAGACACCCTGCTGCCAGAACTCCAACAGGTCCCCGAGGTAGCGAGAAGCTGTCCTGTGGGTaGGTTGGCTGTTCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: PTCRHPAARTPTGPRGSEKLSCG*VGCSVS
Trigger: TGAAACAGAACAGCCAACTCACCCACAGGACAGCTT...CTCGCTACCTCGGGGACCTGTTGGAGTTCTGGCAGCAGGGTGTCTGCAGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTACGTGCTCCAAAGGCTaGCCTTCTGGAGGCTCACCG +
Preference number: 4 (lower is better)
Translates to: LLWAVREWMSRQRHRIMLTCSKG*PSGGSP
Trigger: CGGTGAGCCTCCAGAAGGTCAGCCTTTGGAGCACGT...AAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGCCCCGTACATCACCATaGTCGGATCCCCCACCCATT +
Preference number: 4 (lower is better)
Translates to: SWSLSASGIRVWGKAEGRPRTSP*SDPPPI
Trigger: AATGGGTGGGGGATCCGATCATGGTGATGTACGGGG...CCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTTCGTTCTTGCCAAGGCACCTCCGCCTCGCTaGGCTTTGGAAGCGACCTTG +
Preference number: 4 (lower is better)
Translates to: HGDPSEQGGFITPFVLAKAPPPR*ALEATL
Trigger: CAAGGTCGCTTCCAAAGCTCAGCGAGGCGGAGGTGC...CTTGGCAAGAACGAAAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372406.5
CDS-3UTR TCA 90 bp GGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATAGTTAGCCCTTTGGGAGACTaGGGCAGGAGGACAGCTAGA +
Preference number: 4 (lower is better)
Translates to: GTVLQPCALVSLSVVPIVSPLGD*GRRTAR
Trigger: TCTAGCTGTCCTCCTGCCTCAGTCTCCCAAAGGGCT...AACTATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372406.5
ENST00000610997.1
CDS-3UTR GCA 90 bp ACCTCCCACCACCTGTGCTGTGCCACAGGGCATGATCCTGACAGCGACATCACACACATCATCCTTGAGTaGCAGGTGATGGACGCGGCC +
Preference number: 4 (lower is better)
Translates to: TSHHLCCATGHDPDSDITHIILE*QVMDAA
Trigger: GGCCGCGTCCATCACCTGGCACTCAAGGATGATGTG...TGTGATGTCGCTGTCAGGATCATGCCCTGTGGCACAGCACAGGTGGTGGGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp CCGCGGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATGAATCCTGGGGCAGGTaGTACATCCTAAACTGGGTT +
Preference number: 4 (lower is better)
Translates to: PRHCAPAMCPGVTVGGANESWGR*YILNWV
Trigger: AACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTC...ATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCCGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp CATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCACCAGCCTGGGCCTCAGGAGCTaGTGTCCTGGTCACTCTCAG +
Preference number: 4 (lower is better)
Translates to: HFLKHQTDTSHPPSPSTSLGLRS*CPGHSQ
Trigger: CTGAGAGTGACCAGGACAGCAGCTCCTGAGGCCCAG...GCTGGTGGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp GCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGACCTCCCACCACCTGTaGTGTGCCACAGGGCATGAT +
Preference number: 4 (lower is better)
Translates to: AVLVTLSIWNKGLGQSRGTSHHL*CATGHD
Trigger: ATCATGCCCTGTGGCACAGCACAGGTGGTGGGAGGT...CCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp TCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGACCTCCCACCACCTGTaGTGTGCCACAGGGCATGAT +
Preference number: 4 (lower is better)
Translates to: SWSLSASGIRVWGKAEGRTSHHL*CATGHD
Trigger: ATCATGCCCTGTGGCACAGCACAGGTGGTGGGAGGT...CCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp GCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTGAAGCCAGACAGTGCTaGTCTGGGCTGTCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: AALGCQGVDVQATPQDNAEARQC*SGLSGS
Trigger: ACTCCCTGACAGCCCAGAGCAGCACTGTCTGGCTTC...AGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp TCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCAGGGTCCTGGTCAGGACCAGCACTaGAGACACTCGGCCATGCTG +
Preference number: 4 (lower is better)
Translates to: SQTGNGTLPALLLKSQGPGQDQH*RHSAML
Trigger: CAGCATGGCCGAGTGTCTGCAGTGCTGGTCCTGACC...AGGACCCTGGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTACTTACAGGGCTGTGTaGTGCCTGGGCAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: LLWAVREWMSRQRHRIMLTYRAV*CLGRLD
Trigger: GTCCAGCCTGCCCAGGCAGCACACAGCCCTGTAAGT...AAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp ACCTCCCACCACCTGTGCTGTGCCACAGGGCATGATCCTGACAGCGACATCACACTGCAGACACCCTGCTaGCAGAACTCCAACAGGTCC +
Preference number: 4 (lower is better)
Translates to: TSHHLCCATGHDPDSDITLQTPC*QNSNRS
Trigger: GGACCTGTTGGAGTTCTGGCAGCAGGGTGTCTGCAG...TGTGATGTCGCTGTCAGGATCATGCCCTGTGGCACAGCACAGGTGGTGGGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTTTTGAATCGTCGAGGAGCCTGTaGTGCCCACCTCGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: WAVREWMSRQRHRIMLFESSRSL*CPPRGP
Trigger: AGGGCCCCGAGGTGGGCAGCACAGGCTCCTCGACGA...TTCAAAAAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CCGCGGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATGCTGAAGAGGTCCCATaGTGTCACCTTTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: PRHCAPAMCPGVTVGGANAEEVP*CHLFHL
Trigger: CAGATGGAAAAGGTGACAGCATGGGACCTCTTCAGC...ATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCCGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp GGGCTCCAGTGTCCGCTTCCTTCTGCTAAAAATAGAGGAACCACCCCTGCAGCCCCCGCTGGCAGGACCTaGCTTCCTTTACTGTTGCCG +
Preference number: 4 (lower is better)
Translates to: GLQCPLPSAKNRGTTPAAPAGRT*LPLLLP
Trigger: CGGCAACAGTAAAGGAAGGCAGGTCCTGCCAGCGGG...GGCTGCAGGGGTGGTTCCTCTATTTTTAGCAGAAGGAAGCGGACACTGGAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR CCA 90 bp AGTAGACATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCCAGCAAACCCAGCATTaGGAGCAGCCGGAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: SRHFLKHQTDTSHPPSPSQQTQH*EQPEAR
Trigger: GCGGGCCTCCGGCTGCTCCCAATGCTGGGTTTGCTG...GGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATGTCTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp GACAGTGCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATTGTGTCTTCTGGGTCTaGTTGCCTGCTGAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: DSAALGCQGVDVQATPQDCVFWV*LPAEAG
Trigger: CCCTGCTTCAGCAGGCAACCAGACCCAGAAGACACA...ATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGCACTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp TGCGACCCGGCCGCTCGGCTTCTAGCTGCCTACCCAAAGAACCCCGTGTTATGCCCACTGGGAAGAGGATaGCACCACAACACAACAGGT +
Preference number: 4 (lower is better)
Translates to: CDPAARLLAAYPKNPVLCPLGRG*HHNTTG
Trigger: ACCTGTTGTGTTGTGGTGCCATCCTCTTCCCAGTGG...GCATAACACGGGGTTCTTTGGGTAGGCAGCTAGAAGCCGAGCGGCCGGGTCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR CCA 90 bp CCCACCTGCAGACACCCTGCTGCCAGAACTCCAACAGGTCCCCGAGGTAGCGAGCCACTTCCACTGGAATaGAACAGCGAGTTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: PTCRHPAARTPTGPRGSEPLPLE*NSEFEE
Trigger: CTCCTCAAACTCGCTGTTCCATTCCAGTGGAAGTGG...CTCGCTACCTCGGGGACCTGTTGGAGTTCTGGCAGCAGGGTGTCTGCAGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CCCAGAATGAGCCTATGTGGGATCAATAGGCACGGGGAGAAAGATGGCAGAGAACCTTCCCACTCGCCCTaGGGCTCCACGGAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: PRMSLCGINRHGEKDGREPSHSP*GSTEPL
Trigger: CAACGGCTCCGTGGAGCCCCAGGGCGAGTGGGAAGG...TTCTCTGCCATCTTTCTCCCCGTGCCTATTGATCCCACATAGGCTCATTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGCTCCCAAACAGGCAATaGCACTCTCCCCGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SWSLSASGIRVWGKAEGRLPNRQ*HSPRPS
Trigger: AGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGAG...CCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp GGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATAGTTTCTGGAATAAGGGTCTaGGGCAAAGCCGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GTVLQPCALVSLSVVPIVSGIRV*GKAEGR
Trigger: CCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGA...AACTATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp GTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGCAGACAGTGCTGCTCTaGGCTGTCAGGGAGTGGATG +
Preference number: 4 (lower is better)
Translates to: VLVTLSIWNKGLGQSRGQQTVLL*AVREWM
Trigger: CATCCACTCCCTGACAGCCCAGAGCAGCACTGTCTG...CTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp TTGCCAAGGAGTCTATCGCCTCATCCACAACATCTGCTTGCGGGAGAAACAGCAGCTGCCTGGGCAGGCTaGACATGTCCAGGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: LPRSLSPHPQHLLAGETAAAWAG*TCPGRG
Trigger: TCCCCGCCCTGGACATGTCCAGCCTGCCCAGGCAGC...TGCTGTTTCTCCCGCAAGCAGATGTTGTGGATGAGGCGATAGACTCCTTGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp GCGATGAGGTCATCACGCAGGAGGAAATCTCACCCACACGAGGTGGACTTACAGGGGCTGTGTGCTGCCTaGGCAGGCTGGACATGTCCA +
Preference number: 4 (lower is better)
Translates to: AMRSSRRRKSHPHEVDLQGLCAA*AGWTCP
Trigger: TGGACATGTCCAGCCTGCCCAGGCAGCACACAGCCC...CTGTAAGTCCACCTCGTGTGGGTGAGATTTCCTCCTGCGTGATGACCTCATCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp AATGAGGACACCTCCACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTGGGCTGTGTGCTGCCTaGGCAGGCTGGACATGTCCA +
Preference number: 4 (lower is better)
Translates to: NEDTSTETLPSREVSSHLGLCAA*AGWTCP
Trigger: TGGACATGTCCAGCCTGCCCAGGCAGCACACAGCCC...AAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCACCAGCCAGCGGGGTGAAGTGTaGAGTGTGGAAGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: HFLKHQTDTSHPPSPSTSQRGEV*SVEAGV
Trigger: CACCCCTGCTTCCACACTCCACACTTCACCCCGCTG...GCTGGTGGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp GGGCTCCAGTGTCCGCTTCCTTCTGCTAAAAATAGAGGAACCACCCCTGCAGCCCCAGATCAGACAGCCTaGGGCTCCAGTGTCCGCTTC +
Preference number: 4 (lower is better)
Translates to: GLQCPLPSAKNRGTTPAAPDQTA*GSSVRF
Trigger: GAAGCGGACACTGGAGCCCCAGGCTGTCTGATCTGG...GGCTGCAGGGGTGGTTCCTCTATTTTTAGCAGAAGGAAGCGGACACTGGAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR TCA 90 bp ACCAGAAATAGAGAGTCCTTCCACAAGCCATATTCAGTCGTGCCCTCCTCGGTGTCCTTGAGTGCCAGGTaGTGGACGCGGCCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: TRNRESFHKPYSVVPSSVSLSAR*WTRPRP
Trigger: TGGCCTGGGCCGCGTCCATCACCTGGCACTCAAGGA...CACCGAGGAGGGCACGACTGAATATGGCTTGTGGAAGGACTCTCTATTTCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR TCA 90 bp GGGCTCCAGTGTCCGCTTCCTTCTGCTAAAAATAGAGGAACCACCCCTGCAGCCGCCTCACATCATCCTTaGGTGCCAGGTGATGGACGC +
Preference number: 4 (lower is better)
Translates to: GLQCPLPSAKNRGTTPAAASHHP*VPGDGR
Trigger: GCGTCCATCACCTGGCACTCAAGGATGATGTGAGGC...GGCTGCAGGGGTGGTTCCTCTATTTTTAGCAGAAGGAAGCGGACACTGGAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR TCA 90 bp TCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCAGGGTCCTGCCTCACATCATCCTTaGGTGCCAGGTGATGGACGC +
Preference number: 4 (lower is better)
Translates to: SQTGNGTLPALLLKSQGPASHHP*VPGDGR
Trigger: GCGTCCATCACCTGGCACTCAAGGATGATGTGAGGC...AGGACCCTGGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp TCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGCATACGCGTGGAATCTaGACACCCAACGCTGGCGTT +
Preference number: 4 (lower is better)
Translates to: SWSLSASGIRVWGKAEGRHTRGI*TPNAGV
Trigger: AACGCCAGCGTTGGGTGTTCAGATTCCACGCGTATG...CCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp AATGAGGACACCTCCACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTCACTCGGCCATGCTGTaGGTGAGCCCAGACATACGC +
Preference number: 4 (lower is better)
Translates to: NEDTSTETLPSREVSSHLHSAML*VSPDIR
Trigger: GCGTATGTCTGGGCTCACTCACAGCATGGCCGAGTG...AAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp ACCCACACGAGGTGGACTTACAGGGCTGTGTGCTGCCTGGGCAGGCTGGACATGCCGGTGTACCCAGAATaGGCCTATGTGGGATCAATA +
Preference number: 4 (lower is better)
Translates to: THTRWTYRAVCCLGRLDMPVYPE*AYVGSI
Trigger: TATTGATCCCACATAGGCTCATTCTGGGTACACCGG...CATGTCCAGCCTGCCCAGGCAGCACACAGCCCTGTAAGTCCACCTCGTGTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CCCACCTGCAGACACCCTGCTGCCAGAACTCCAACAGGTCCCCGAGGTAGCGAGGATGTAGGCTACATTTaGCAGGACCTGGAGTGGAAT +
Preference number: 4 (lower is better)
Translates to: PTCRHPAARTPTGPRGSEDVGYI*QDLEWN
Trigger: ATTCCACTCCAGGTCCTGGCAAATGTAGCCTACATC...CTCGCTACCTCGGGGACCTGTTGGAGTTCTGGCAGCAGGGTGTCTGCAGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CTGCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGTGTGCTCCAGCCATGTaGCCTGGTGTCACTGTCGGT +
Preference number: 4 (lower is better)
Translates to: LLSWSLSASGIRVWGKAECAPAM*PGVTVG
Trigger: ACCGACAGTGACACCAGGGCACATGGCTGGAGCACA...CTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp CTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTTGTGCTCCAGCCATGTaGCCTGGTGTCACTGTCGGT +
Preference number: 4 (lower is better)
Translates to: LLWAVREWMSRQRHRIMLCAPAM*PGVTVG
Trigger: ACCGACAGTGACACCAGGGCACATGGCTGGAGCACA...AAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp CATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCACCAGCACCTCCCACCACCTGTaGTGTGCCACAGGGCATGAT +
Preference number: 4 (lower is better)
Translates to: HFLKHQTDTSHPPSPSTSTSHHL*CATGHD
Trigger: ATCATGCCCTGTGGCACAGCACAGGTGGTGGGAGGT...GCTGGTGGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp CATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCACCAGCGAAGCCAGACAGTGCTaGTCTGGGCTGTCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: HFLKHQTDTSHPPSPSTSEARQC*SGLSGS
Trigger: ACTCCCTGACAGCCCAGAGCAGCACTGTCTGGCTTC...GCTGGTGGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp CCGCGGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATCATCTTTCACACAGCTaGTGGGAGAAAACGCTGCAA +
Preference number: 4 (lower is better)
Translates to: PRHCAPAMCPGVTVGGANHLSHS*WEKTLQ
Trigger: TTGCAGCGTTTTCTCCCAGCAGCTGTGTGAAAGATG...ATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCCGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp AGTAGACATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCGAACGCCGTCCCACCTaGAGACACCCTGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: SRHFLKHQTDTSHPPSPSERRPT*RHPAAR
Trigger: TCTGGCAGCAGGGTGTCTGCAGGTGGGACGGCGTTC...GGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATGTCTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp GGCGCCCGCTGGCAGGACCTGCCTTCCTTTACTGTTGCCGTGGAGCTGAGCAGACGATTCACACTGTGCTaGTTTGTGTTAGGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: GARWQDLPSFTVAVELSRRFTLC*FVLGKG
Trigger: CCCTTTGCCTAACACAAAGCAGCACAGTGTGAATCG...TCTGCTCAGCTCCACGGCAACAGTAAAGGAAGGCAGGTCCTGCCAGCGGGCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR CCA 90 bp CCCACCTGCAGACACCCTGCTGCCAGAACTCCAACAGGTCCCCGAGGTAGCGAGGGTACCAGCTTCTGGTaGAGACTTTACTCTTACCTC +
Preference number: 4 (lower is better)
Translates to: PTCRHPAARTPTGPRGSEGTSFW*RLYSYL
Trigger: GAGGTAAGAGTAAAGTCTCCACCAGAAGCTGGTACC...CTCGCTACCTCGGGGACCTGTTGGAGTTCTGGCAGCAGGGTGTCTGCAGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TGCGACCCGGCCGCTCGGCTTCTAGCTGCCTACCCAAAGAACCCCGTGTTATGCCCATCTTGTGTCTTCTaGGTCTGGTTGCCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: CDPAARLLAAYPKNPVLCPSCVF*VWLPAE
Trigger: TTCAGCAGGCAACCAGACCCAGAAGACACAAGATGG...GCATAACACGGGGTTCTTTGGGTAGGCAGCTAGAAGCCGAGCGGCCGGGTCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR CCA 90 bp TCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCAGGGTCCTCTCCCAAACAGGCAATaGCACTCTCCCCGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SQTGNGTLPALLLKSQGPLPNRQ*HSPRPS
Trigger: AGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGAG...AGGACCCTGGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp AACCACGCAGAGAGGCTCAGATGCATCGCTGGGCTACAGAAGTGGCCTCTGGGGGTGGGCTCCAGCTTTTaGAAGCAACCCTACCTAGCT +
Preference number: 4 (lower is better)
Translates to: NHAERLRCIAGLQKWPLGVGSSF*KQPYLA
Trigger: AGCTAGGTAGGGTTGCTTCCAAAAGCTGGAGCCCAC...CCCCAGAGGCCACTTCTGTAGCCCAGCGATGCATCTGAGCCTCTCTGCGTGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTTCGTTCTTGCCAAGCTGAACACCCAACGCTaGCGTTCCCGTGCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: HGDPSEQGGFITPFVLAKLNTQR*RSRASL
Trigger: CAGACTGGCACGGGAACGCCAGCGTTGGGTGTTCAG...CTTGGCAAGAACGAAAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp GTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGCCCAGACATACGCGTaGAATCTGAACACCCAACGC +
Preference number: 4 (lower is better)
Translates to: VLVTLSIWNKGLGQSRGQAQTYA*NLNTQR
Trigger: GCGTTGGGTGTTCAGATTCCACGCGTATGTCTGGGC...CTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCACCAGCTGTCCACTGCTGCTCTaGAAGGGTCAGGACCAGCAC +
Preference number: 4 (lower is better)
Translates to: HFLKHQTDTSHPPSPSTSCPLLL*KGQDQH
Trigger: GTGCTGGTCCTGACCCTTCCAGAGCAGCAGTGGACA...GCTGGTGGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCACCAGCCTCACCCACACGAGGTaGACTTACAGGGCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: HFLKHQTDTSHPPSPSTSLTHTR*TYRAVC
Trigger: GCACACAGCCCTGTAAGTCCACCTCGTGTGGGTGAG...GCTGGTGGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp GCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGGAGGGAGGGAGGCTGTaGAATGAGACAGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: AVLVTLSIWNKGLGQSRGEGGRL*NETAEM
Trigger: CATCTCTGCTGTCTCATTCCACAGCCTCCCTCCCTC...CCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp GGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATAGTTGAGGGAGGGAGGCTGTaGAATGAGACAGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: GTVLQPCALVSLSVVPIVEGGRL*NETAEM
Trigger: CATCTCTGCTGTCTCATTCCACAGCCTCCCTCCCTC...AACTATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CCAGGGCTGGGGGCAGAACACTTGATACCAGTGAACCAAGAAGGGAAAACTCTGTGGGGAGATGCTGTTTaGCGCCCGCTGGCAGGACCT +
Preference number: 4 (lower is better)
Translates to: PGLGAEHLIPVNQEGKTLWGDAV*RPLAGP
Trigger: AGGTCCTGCCAGCGGGCGCCAAACAGCATCTCCCCA...CAGAGTTTTCCCTTCTTGGTTCACTGGTATCAAGTGTTCTGCCCCCAGCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR TCA 90 bp GCGATGAGGTCATCACGCAGGAGGAAATCTCACCCACACGAGGTGGACTTACAGGCCTCACATCATCCTTaGGTGCCAGGTGATGGACGC +
Preference number: 4 (lower is better)
Translates to: AMRSSRRRKSHPHEVDLQASHHP*VPGDGR
Trigger: GCGTCCATCACCTGGCACTCAAGGATGATGTGAGGC...CTGTAAGTCCACCTCGTGTGGGTGAGATTTCCTCCTGCGTGATGACCTCATCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp GGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATAGTTTTAGGCTCCTGGCTCTaGCCAAGGACTTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: GTVLQPCALVSLSVVPIVLGSWL*PRTFSS
Trigger: GGATGAGAAAGTCCTTGGTCAGAGCCAGGAGCCTAA...AACTATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp TGTTTCATTCTGACCATTCTGACTCTGCCCAGAACGCCGTCCCACCTGCAGACACCTCCCATTCCCGCCTaGAAGAGGATCCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: CFILTILTLPRTPSHLQTPPIPA*KRIQLP
Trigger: AGGCAGCTGGATCCTCTTTCAGGCGGGAATGGGAGG...TGTCTGCAGGTGGGACGGCGTTCTGGGCAGAGTCAGAATGGTCAGAATGAAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp GCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTACAAAGCCACAAGCATaGAGGGAAGCCAGACAGTGC +
Preference number: 4 (lower is better)
Translates to: AALGCQGVDVQATPQDNATKPQA*REARQC
Trigger: GCACTGTCTGGCTTCCCTTCATGCTTGTGGCTTTGT...AGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp CATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCACCAGCACGCAAGAGCAGAGATaGACGGTGGGTCACGGCTAT +
Preference number: 4 (lower is better)
Translates to: HFLKHQTDTSHPPSPSTSTQEQR*TVGHGY
Trigger: ATAGCCGTGACCCACCGTTCATCTCTGCTCTTGCGT...GCTGGTGGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp AACCACGCAGAGAGGCTCAGATGCATCGCTGGGCTACAGAAGTGGCCTCTGGGGCATTCAAACACCGCATaGCAACGAACCCAGTGGACT +
Preference number: 4 (lower is better)
Translates to: NHAERLRCIAGLQKWPLGHSNTA*QRTQWT
Trigger: AGTCCACTGGGTTCGTTGTCATGCGGTGTTTGAATG...CCCCAGAGGCCACTTCTGTAGCCCAGCGATGCATCTGAGCCTCTCTGCGTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp GACAGTGCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATCCGGTGTACCCAGAATaGGCCTATGTGGGATCAATA +
Preference number: 4 (lower is better)
Translates to: DSAALGCQGVDVQATPQDPVYPE*AYVGSI
Trigger: TATTGATCCCACATAGGCTCATTCTGGGTACACCGG...ATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGCACTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTTCGTTCTTGCCAAGCCCCGTACATCACCATaGTCGGATCCCCCACCCATT +
Preference number: 4 (lower is better)
Translates to: HGDPSEQGGFITPFVLAKPRTSP*SDPPPI
Trigger: AATGGGTGGGGGATCCGATCATGGTGATGTACGGGG...CTTGGCAAGAACGAAAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp GGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATAGTTAGATTCGCTCTCTGCTaGAGAGGTCCCATGCTGTCA +
Preference number: 4 (lower is better)
Translates to: GTVLQPCALVSLSVVPIVRFALC*RGPMLS
Trigger: TGACAGCATGGGACCTCTTCAGCAGAGAGCGAATCT...AACTATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp CCGTCCTTGCTACACTTCCCCACACATGGGGTCACAACTGCATACACCTTAGAGGGCTCGGCCAGCAACTaGAGCAAACCCAGCATTGGG +
Preference number: 4 (lower is better)
Translates to: PSLLHFPTHGVTTAYTLEGSASN*SKPSIG
Trigger: CCCAATGCTGGGTTTGCTGCAGTTGCTGGCCGAGCC...CTCTAAGGTGTATGCAGTTGTGACCCCATGTGTGGGGAAGTGTAGCAAGGACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp CATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCACCAGCAGTTTCCTTGGACAGTaGCATCCTCAGGGTCGGCTC +
Preference number: 4 (lower is better)
Translates to: HFLKHQTDTSHPPSPSTSSFLGQ*HPQGRL
Trigger: GAGCCGACCCTGAGGATGGCACTGTCCAAGGAAACT...GCTGGTGGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp GACAGTGCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATGTTCACTGTAGGAGCTaGTCCTGCTGTCCAATAGGA +
Preference number: 4 (lower is better)
Translates to: DSAALGCQGVDVQATPQDVHCRS*SCCPIG
Trigger: TCCTATTGGACAGCAGGAGCAGCTCCTACAGTGAAC...ATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGCACTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp TGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTTTTGAAGTTTCCGCGGCACTGTaGTCCAGCCATGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: WAVREWMSRQRHRIMLFEVSAAL*SSHVPW
Trigger: CCAGGGCACATGGCTGGAGCACAGTGCCGCGGAAAC...TTCAAAAAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp GACAGTGCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATGAATCCTGGGGCAGGTaGTACATCCTAAACTGGGTT +
Preference number: 4 (lower is better)
Translates to: DSAALGCQGVDVQATPQDESWGR*YILNWV
Trigger: AACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTC...ATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGCACTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp TGTTTCATTCTGACCATTCTGACTCTGCCCAGAACGCCGTCCCACCTGCAGACACTGGGCCTCAGGAGCTaGTGTCCTGGTCACTCTCAG +
Preference number: 4 (lower is better)
Translates to: CFILTILTLPRTPSHLQTLGLRS*CPGHSQ
Trigger: CTGAGAGTGACCAGGACAGCAGCTCCTGAGGCCCAG...TGTCTGCAGGTGGGACGGCGTTCTGGGCAGAGTCAGAATGGTCAGAATGAAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TTGCCAAGGAGTCTATCGCCTCATCCACAACATCTGCTTGCGGGAGAAACAGCATGCCAGTCTGAGGGCTaGGGCTCCAGCGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LPRSLSPHPQHLLAGETACQSEG*GSSACP
Trigger: TGGACAAGCGCTGGAGCCGCAGCCCTCAGACTGGCA...TGCTGTTTCTCCCGCAAGCAGATGTTGTGGATGAGGCGATAGACTCCTTGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TTGCAAAACCCAGCATGTGAAATGAGGACACCTCCACGGAGACCCTTCCGAGCAGGTCAGGACCAGCACTaGAGACACTCGGCCATGCTG +
Preference number: 4 (lower is better)
Translates to: LQNPACEMRTPPRRPFRAGQDQH*RHSAML
Trigger: CAGCATGGCCGAGTGTCTGCAGTGCTGGTCCTGACC...TGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATTTCACATGCTGGGTTTTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCAGGGTCCTGTGTGGAAGCAGGGGTaGAGCAGTGTGCTAGATCTG +
Preference number: 4 (lower is better)
Translates to: SQTGNGTLPALLLKSQGPVWKQG*SSVLDL
Trigger: CAGATCTAGCACACTGCTGCACCCCTGCTTCCACAC...AGGACCCTGGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp ACCAGAAATAGAGAGTCCTTCCACAAGCCATATTCAGTCGTGCCCTCCTCGGTGCTCTGCATGGGGAGATaGTGTTTGGCGCCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: TRNRESFHKPYSVVPSSVLCMGR*CLAPAG
Trigger: GCCAGCGGGCGCCAAACAGCATCTCCCCATGCAGAG...CACCGAGGAGGGCACGACTGAATATGGCTTGTGGAAGGACTCTCTATTTCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR CCA 90 bp CAGGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCCAGCAAACCCAGCATTaGGAGCAGCCGGAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: QESWGRCYILNWVLTLLSQQTQH*EQPEAR
Trigger: GCGGGCCTCCGGCTGCTCCCAATGCTGGGTTTGCTG...GGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp GACAGTGCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATCCATCTTGTGTCTTCTaGGTCTGGTTGCCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: DSAALGCQGVDVQATPQDPSCVF*VWLPAE
Trigger: TTCAGCAGGCAACCAGACCCAGAAGACACAAGATGG...ATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGCACTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp TCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGCCACTGGGAAGAGGATaGCACCACAACACAACAGGT +
Preference number: 4 (lower is better)
Translates to: SWSLSASGIRVWGKAEGRPLGRG*HHNTTG
Trigger: ACCTGTTGTGTTGTGGTGCCATCCTCTTCCCAGTGG...CCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp TGTTTCATTCTGACCATTCTGACTCTGCCCAGAACGCCGTCCCACCTGCAGACATCCAGCCATGTGCCCTaGTGTCACTGTCGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: CFILTILTLPRTPSHLQTSSHVP*CHCRWC
Trigger: GCACCACCGACAGTGACACCAGGGCACATGGCTGGA...TGTCTGCAGGTGGGACGGCGTTCTGGGCAGAGTCAGAATGGTCAGAATGAAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CCGTCCTTGCTACACTTCCCCACACATGGGGTCACAACTGCATACACCTTAGAGTCCAGCCATGTGCCCTaGTGTCACTGTCGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: PSLLHFPTHGVTTAYTLESSHVP*CHCRWC
Trigger: GCACCACCGACAGTGACACCAGGGCACATGGCTGGA...CTCTAAGGTGTATGCAGTTGTGACCCCATGTGTGGGGAAGTGTAGCAAGGACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp AATGAGGACACCTCCACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTTCTGGAATAAGGGTCTaGGGCAAAGCCGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: NEDTSTETLPSREVSSHLSGIRV*GKAEGR
Trigger: CCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGA...AAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCAGGGTCCTCAGGAGCTGCTGTCCTaGTCACTCTCAGCATCTGGA +
Preference number: 4 (lower is better)
Translates to: SQTGNGTLPALLLKSQGPQELLS*SLSASG
Trigger: TCCAGATGCTGAGAGTGACCAGGACAGCAGCTCCTG...AGGACCCTGGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp AGTAGACATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCTGGGCTGTCAGGGAGTaGATGTCCAGGCAACGCCAC +
Preference number: 4 (lower is better)
Translates to: SRHFLKHQTDTSHPPSPSWAVRE*MSRQRH
Trigger: GTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCA...GGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATGTCTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp TCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGTCAGGTTCCCAAACTTaGGACAGTGAGTGTGACCCC +
Preference number: 4 (lower is better)
Translates to: SWSLSASGIRVWGKAEGRSGSQT*DSECDP
Trigger: GGGGTCACACTCACTGTCCCAAGTTTGGGAACCTGA...CCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CCCACCTGCAGACACCCTGCTGCCAGAACTCCAACAGGTCCCCGAGGTAGCGAGCCTACAGAACCCAGATaGCGAATCAAAGTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: PTCRHPAARTPTGPRGSEPTEPR*RIKVQK
Trigger: TTTCTGCACTTTGATTCGCCATCTGGGTTCTGTAGG...CTCGCTACCTCGGGGACCTGTTGGAGTTCTGGCAGCAGGGTGTCTGCAGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp GTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGAGTTCCTCCACTGCCTaGCTTCCTCGCTTGCAAAAC +
Preference number: 4 (lower is better)
Translates to: VLVTLSIWNKGLGQSRGQSSSTA*LPRLQN
Trigger: GTTTTGCAAGCGAGGAAGCCAGGCAGTGGAGGAACT...CTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTTCGTTCTTGCCAAGCTCACCCACACGAGGTaGACTTACAGGGCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: HGDPSEQGGFITPFVLAKLTHTR*TYRAVC
Trigger: GCACACAGCCCTGTAAGTCCACCTCGTGTGGGTGAG...CTTGGCAAGAACGAAAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp ACCCACACGAGGTGGACTTACAGGGCTGTGTGCTGCCTGGGCAGGCTGGACATGTTGGTCTGTAAGGACTaGATGCCTGGAGTAGACTGT +
Preference number: 4 (lower is better)
Translates to: THTRWTYRAVCCLGRLDMLVCKD*MPGVDC
Trigger: ACAGTCTACTCCAGGCATCCAGTCCTTACAGACCAA...CATGTCCAGCCTGCCCAGGCAGCACACAGCCCTGTAAGTCCACCTCGTGTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TGTTTCATTCTGACCATTCTGACTCTGCCCAGAACGCCGTCCCACCTGCAGACACTTTGGAAGCGACCTTaGGCTCCGGGGACCCCTGAT +
Preference number: 4 (lower is better)
Translates to: CFILTILTLPRTPSHLQTLWKRP*APGTPD
Trigger: ATCAGGGGTCCCCGGAGCCCAAGGTCGCTTCCAAAG...TGTCTGCAGGTGGGACGGCGTTCTGGGCAGAGTCAGAATGGTCAGAATGAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372406.5
CDS-3UTR CCA 90 bp GAGTCCTTCCACAAGCCATATTCAGTCGTGCCCTCCTCGGTGGACTCTATGATGCTGTTTGGCGCCCGCTaGCAGGACCTGCCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: ESFHKPYSVVPSSVDSMMLFGAR*QDLPSF
Trigger: AAAGGAAGGCAGGTCCTGCCAGCGGGCGCCAAACAG...CATCATAGAGTCCACCGAGGAGGGCACGACTGAATATGGCTTGTGGAAGGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR TCA 90 bp ACCTCCCACCACCTGTGCTGTGCCACAGGGCATGATCCTGACAGCGACATCACATCAGTGAGAGGCTACTaGCATTCACCACCATGTACC +
Preference number: 4 (lower is better)
Translates to: TSHHLCCATGHDPDSDITSVRGY*HSPPCT
Trigger: GGTACATGGTGGTGAATGTCAGTAGCCTCTCACTGA...TGTGATGTCGCTGTCAGGATCATGCCCTGTGGCACAGCACAGGTGGTGGGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp CATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCACCAGCGGTCTGGTTGCCTGCTaGAGCAGGGTTAACATTAGG +
Preference number: 4 (lower is better)
Translates to: HFLKHQTDTSHPPSPSTSGLVAC*SRVNIR
Trigger: CCTAATGTTAACCCTGCTTCAGCAGGCAACCAGACC...GCTGGTGGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp ACCCACACGAGGTGGACTTACAGGGCTGTGTGCTGCCTGGGCAGGCTGGACATGCTCTCCCATGGCCTTTaGATCCACTGTACTTCTTTT +
Preference number: 4 (lower is better)
Translates to: THTRWTYRAVCCLGRLDMLSHGL*IHCTSF
Trigger: AAAAGAAGTACAGTGGATTCAAAGGCCATGGGAGAG...CATGTCCAGCCTGCCCAGGCAGCACACAGCCCTGTAAGTCCACCTCGTGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CCCACCTGCAGACACCCTGCTGCCAGAACTCCAACAGGTCCCCGAGGTAGCGAGCGTTGGTCACCTTCTTaGCTTTCTTCATACTTTCCA +
Preference number: 4 (lower is better)
Translates to: PTCRHPAARTPTGPRGSERWSPS*LSSYFP
Trigger: TGGAAAGTATGAAGAAAGTCAAGAAGGTGACCAACG...CTCGCTACCTCGGGGACCTGTTGGAGTTCTGGCAGCAGGGTGTCTGCAGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CCGCGGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATCGTTGGTCACCTTCTTaGCTTTCTTCATACTTTCCA +
Preference number: 4 (lower is better)
Translates to: PRHCAPAMCPGVTVGGANRWSPS*LSSYFP
Trigger: TGGAAAGTATGAAGAAAGTCAAGAAGGTGACCAACG...ATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCCGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp CTGCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGCCCCCAGCTGCTCCTTaGGGAAAACTTTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: LLSWSLSASGIRVWGKAEPPAAP*GKLSIS
Trigger: GGAAATGGAAAGTTTTCCTCAAGGAGCAGCTGGGGG...CTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp CCGCGGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATTCACAATGTACCTTCTaGGCTTGTCCTACTATTCAG +
Preference number: 4 (lower is better)
Translates to: PRHCAPAMCPGVTVGGANSQCTF*ACPTIQ
Trigger: CTGAATAGTAGGACAAGCTCAGAAGGTACATTGTGA...ATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCCGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTTCGTTCTTGCCAAGCATACGCGTGGAATCTaGACACCCAACGCTGGCGTT +
Preference number: 4 (lower is better)
Translates to: HGDPSEQGGFITPFVLAKHTRGI*TPNAGV
Trigger: AACGCCAGCGTTGGGTGTTCAGATTCCACGCGTATG...CTTGGCAAGAACGAAAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp GGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATAGTTGTCACGGCTATGACGTaGAGGAGAAAGAGAAGACAC +
Preference number: 4 (lower is better)
Translates to: GTVLQPCALVSLSVVPIVVTAMT*RRKRRH
Trigger: GTGTCTTCTCTTTCTCCTTCACGTCATAGCCGTGAC...AACTATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTGGTGGGTCACGGCTATaGCGTGAAGGAGAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: LLWAVREWMSRQRHRIMLGGSRL*REGERE
Trigger: TTCTCTTTCTCCTTCACGTCATAGCCGTGACCCACC...AAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGCATTCAAACACCGCATaGCAACGAACCCAGTGGACT +
Preference number: 4 (lower is better)
Translates to: SWSLSASGIRVWGKAEGRHSNTA*QRTQWT
Trigger: AGTCCACTGGGTTCGTTGTCATGCGGTGTTTGAATG...CCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TTCCATAAAAGAGAGTACAAAATCAGGTTTCCGCGGCACTGTGCTCCAGCCATGCCCTCACACAGGGCCTaGGATGTGTGGGGCCCATGG +
Preference number: 4 (lower is better)
Translates to: FHKREYKIRFPRHCAPAMPSHRA*DVWGPW
Trigger: CCATGGGCCCCACACATCTCAGGCCCTGTGTGAGGG...CATGGCTGGAGCACAGTGCCGCGGAAACCTGATTTTGTACTCTCTTTTATGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp GTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGAAGCTGTCCTGTGGGTaGGTTGGCTGTTCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: VLVTLSIWNKGLGQSRGQKLSCG*VGCSVS
Trigger: TGAAACAGAACAGCCAACTCACCCACAGGACAGCTT...CTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCAGGGTCCTAGATTCGCTCTCTGCTaGAGAGGTCCCATGCTGTCA +
Preference number: 4 (lower is better)
Translates to: SQTGNGTLPALLLKSQGPRFALC*RGPMLS
Trigger: TGACAGCATGGGACCTCTTCAGCAGAGAGCGAATCT...AGGACCCTGGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp TGTGCCTCTTCAACCAACAGACACTTGCTCAGATCCTGCCACTTCTGGGAAAGGCTGTTGCCGTGGAGCTaGGCAGAGAGAGCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: CASSTNRHLLRSCHFWERLLPWS*AERAVP
Trigger: TGGGACAGCTCTCTCTGCTCAGCTCCACGGCAACAG...CCTTTCCCAGAAGTGGCAGGATCTGAGCAAGTGTCTGTTGGTTGAAGAGGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR GCA 90 bp CATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCACCAGCAGCCATATTCAGTCGTaGCCTCCTCGGTGGACTCTA +
Preference number: 4 (lower is better)
Translates to: HFLKHQTDTSHPPSPSTSSHIQS*PPRWTL
Trigger: TAGAGTCCACCGAGGAGGGCACGACTGAATATGGCT...GCTGGTGGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp GCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTACATGGGGTCACAACTaGATACACCTTAGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: AALGCQGVDVQATPQDNATWGHN*IHLRAP
Trigger: CGGAGCTCTAAGGTGTATGCAGTTGTGACCCCATGT...AGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp GCGATGAGGTCATCACGCAGGAGGAAATCTCACCCACACGAGGTGGACTTACAGTCCACCAGCCGTCCTTaGTACACTTCCCCACACATG +
Preference number: 4 (lower is better)
Translates to: AMRSSRRRKSHPHEVDLQSTSRP*YTSPHM
Trigger: CATGTGTGGGGAAGTGTAGCAAGGACGGCTGGTGGA...CTGTAAGTCCACCTCGTGTGGGTGAGATTTCCTCCTGCGTGATGACCTCATCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TTGCAAAACCCAGCATGTGAAATGAGGACACCTCCACGGAGACCCTTCCGAGCAGAAGCCAGACAGTGCTaGTCTGGGCTGTCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: LQNPACEMRTPPRRPFRAEARQC*SGLSGS
Trigger: ACTCCCTGACAGCCCAGAGCAGCACTGTCTGGCTTC...TGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATTTCACATGCTGGGTTTTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CCCAGAATGAGCCTATGTGGGATCAATAGGCACGGGGAGAAAGATGGCAGAGAAAGGGAAGCCAGACAGTaGTGCTCTGGGCTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: PRMSLCGINRHGEKDGREREARQ*CSGLSG
Trigger: CCCTGACAGCCCAGAGCAGCACTGTCTGGCTTCCCT...TTCTCTGCCATCTTTCTCCCCGTGCCTATTGATCCCACATAGGCTCATTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp AATGAGGACACCTCCACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTAGGTACCTGTTCCCCTaGAGGTGTGGCTCTCTGACA +
Preference number: 4 (lower is better)
Translates to: NEDTSTETLPSREVSSHLRYLFP*RCGSLT
Trigger: TGTCAGAGAGCCACACCTGCAGGGGAACAGGTACCT...AAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp GGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATAGTTACATCCTGTGGTTTCTaGCTGACCCTTCTAAGCCAG +
Preference number: 4 (lower is better)
Translates to: GTVLQPCALVSLSVVPIVTSCGF*LTLLSQ
Trigger: CTGGCTTAGAAGGGTCAGGCAGAAACCACAGGATGT...AACTATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp ACCCACACGAGGTGGACTTACAGGGCTGTGTGCTGCCTGGGCAGGCTGGACATGGATGGCGAATCAAAGTaGAGAAAAAGAACACCCGCT +
Preference number: 4 (lower is better)
Translates to: THTRWTYRAVCCLGRLDMDGESK*RKRTPA
Trigger: AGCGGGTGTTCTTTTTCTGCACTTTGATTCGCCATC...CATGTCCAGCCTGCCCAGGCAGCACACAGCCCTGTAAGTCCACCTCGTGTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp ACCTCCCACCACCTGTGCTGTGCCACAGGGCATGATCCTGACAGCGACATCACACACACCTTTCGTTCTTaGCAAGGAGTCTATCGCCTC +
Preference number: 4 (lower is better)
Translates to: TSHHLCCATGHDPDSDITHTFRS*QGVYRL
Trigger: GAGGCGATAGACTCCTTGGCAAGAACGAAAGGTGTG...TGTGATGTCGCTGTCAGGATCATGCCCTGTGGCACAGCACAGGTGGTGGGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp GCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTGAGAAAACGCTGCAATaGACCAAAGCCTTTAGCCGG +
Preference number: 4 (lower is better)
Translates to: AALGCQGVDVQATPQDNAEKTLQ*TKAFSR
Trigger: CCGGCTAAAGGCTTTGGTGCATTGCAGCGTTTTCTC...AGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp AACCACGCAGAGAGGCTCAGATGCATCGCTGGGCTACAGAAGTGGCCTCTGGGGGCTGGGAGAAAACGCTaGAATGCACCAAAGCCTTTA +
Preference number: 4 (lower is better)
Translates to: NHAERLRCIAGLQKWPLGAGRKR*NAPKPL
Trigger: TAAAGGCTTTGGTGCATTGCAGCGTTTTCTCCCAGC...CCCCAGAGGCCACTTCTGTAGCCCAGCGATGCATCTGAGCCTCTCTGCGTGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp GGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATAGTTAGGCCAGAATGCATCTaGAATTCCAACAGGCATCGC +
Preference number: 4 (lower is better)
Translates to: GTVLQPCALVSLSVVPIVRPECI*NSNRHR
Trigger: GCGATGCCTGTTGGAATTGCAGATGCATTCTGGCCT...AACTATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp GTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGGAGTATGTTCAGCCTaGCGACCGATAACTACGTTC +
Preference number: 4 (lower is better)
Translates to: VLVTLSIWNKGLGQSRGQGVCSA*RPITTF
Trigger: GAACGTAGTTATCGGTCGGCAGGCTGAACATACTCC...CTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp AATGAGGACACCTCCACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTGCAGAGAGGCTCAGATaGATCGCTGGGCTACAGAAG +
Preference number: 4 (lower is better)
Translates to: NEDTSTETLPSREVSSHLAERLR*IAGLQK
Trigger: CTTCTGTAGCCCAGCGATGCATCTGAGCCTCTCTGC...AAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTATGCCCATTCACTCCTaGACCATCTCAGTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: LLWAVREWMSRQRHRIMLMPIHS*TISVCS
Trigger: GGAGCACACTGAGATGGTGCAGGAGTGAATGGGCAT...AAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TGTTTCATTCTGACCATTCTGACTCTGCCCAGAACGCCGTCCCACCTGCAGACACTGCAGACACCCTGCTaGCAGAACTCCAACAGGTCC +
Preference number: 4 (lower is better)
Translates to: CFILTILTLPRTPSHLQTLQTPC*QNSNRS
Trigger: GGACCTGTTGGAGTTCTGGCAGCAGGGTGTCTGCAG...TGTCTGCAGGTGGGACGGCGTTCTGGGCAGAGTCAGAATGGTCAGAATGAAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CCGTCCTTGCTACACTTCCCCACACATGGGGTCACAACTGCATACACCTTAGAGCACCTGCAGACACCCTaGTGCCAGAACTCCAACAGG +
Preference number: 4 (lower is better)
Translates to: PSLLHFPTHGVTTAYTLEHLQTP*CQNSNR
Trigger: CCTGTTGGAGTTCTGGCAGCAGGGTGTCTGCAGGTG...CTCTAAGGTGTATGCAGTTGTGACCCCATGTGTGGGGAAGTGTAGCAAGGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TTGCAAAACCCAGCATGTGAAATGAGGACACCTCCACGGAGACCCTTCCGAGCACACCTGCAGACACCCTaGTGCCAGAACTCCAACAGG +
Preference number: 4 (lower is better)
Translates to: LQNPACEMRTPPRRPFRAHLQTP*CQNSNR
Trigger: CCTGTTGGAGTTCTGGCAGCAGGGTGTCTGCAGGTG...TGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATTTCACATGCTGGGTTTTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp GCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGGATCGGCCGCTCCTGTaGAGACTTTCAGTTAGAGAT +
Preference number: 4 (lower is better)
Translates to: AVLVTLSIWNKGLGQSRGDRPLL*RLSVRD
Trigger: ATCTCTAACTGAAAGTCTGCACAGGAGCGGCCGATC...CCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp GTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGATCGGCCGCTCCTGTaGAGACTTTCAGTTAGAGAT +
Preference number: 4 (lower is better)
Translates to: VLVTLSIWNKGLGQSRGQDRPLL*RLSVRD
Trigger: ATCTCTAACTGAAAGTCTGCACAGGAGCGGCCGATC...CTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp GTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGCGTTTTCCTGGAGATTaGGACCTAGGAAGTCGTCGA +
Preference number: 4 (lower is better)
Translates to: VLVTLSIWNKGLGQSRGQRFPGD*DLGSRR
Trigger: TCGACGACTTCCTAGGTCGCAATCTCCAGGAAAACG...CTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp GACAGTGCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATGGTACCAGCTTCTGGTaGAGACTTTACTCTTACCTC +
Preference number: 4 (lower is better)
Translates to: DSAALGCQGVDVQATPQDGTSFW*RLYSYL
Trigger: GAGGTAAGAGTAAAGTCTCCACCAGAAGCTGGTACC...ATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGCACTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp TTCCTCTGCATGGGGAGATGCTGTTTGGCGCCCGCTGGCAGGACCTGCCTTCCTAGGATTTCTCTCCCATaGCCTTTGAATCCACTGTAC +
Preference number: 4 (lower is better)
Translates to: FLCMGRCCLAPAGRTCLPRISLP*PLNPLY
Trigger: GTACAGTGGATTCAAAGGCCATGGGAGAGAAATCCT...AGGAAGGCAGGTCCTGCCAGCGGGCGCCAAACAGCATCTCCCCATGCAGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR CCA 90 bp TCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCAGGGTCCTCCACTGGGAAGAGGATaGCACCACAACACAACAGGT +
Preference number: 4 (lower is better)
Translates to: SQTGNGTLPALLLKSQGPPLGRG*HHNTTG
Trigger: ACCTGTTGTGTTGTGGTGCCATCCTCTTCCCAGTGG...AGGACCCTGGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp GCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTCAAAGAAGACCAGTGTaGCCGTTTCATCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: AALGCQGVDVQATPQDNAQRRPV*PFHPGA
Trigger: AGCTCCTGGATGAAACGGCCACACTGGTCTTCTTTG...AGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp AGTAGACATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCCTCCCAAACAGGCAATaGCACTCTCCCCGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SRHFLKHQTDTSHPPSPSLPNRQ*HSPRPS
Trigger: AGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGAG...GGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATGTCTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp GCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTGTCACTCTCAGCATCTaGAATAAGGGTCTGGGGCAA +
Preference number: 4 (lower is better)
Translates to: AALGCQGVDVQATPQDNAVTLSI*NKGLGQ
Trigger: TTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGAC...AGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp GTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGTCACTCTCAGCATCTaGAATAAGGGTCTGGGGCAA +
Preference number: 4 (lower is better)
Translates to: VLVTLSIWNKGLGQSRGQVTLSI*NKGLGQ
Trigger: TTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGAC...CTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp CCGTCCTTGCTACACTTCCCCACACATGGGGTCACAACTGCATACACCTTAGAGCAGACAGTGCTGCTCTaGGCTGTCAGGGAGTGGATG +
Preference number: 4 (lower is better)
Translates to: PSLLHFPTHGVTTAYTLEQTVLL*AVREWM
Trigger: CATCCACTCCCTGACAGCCCAGAGCAGCACTGTCTG...CTCTAAGGTGTATGCAGTTGTGACCCCATGTGTGGGGAAGTGTAGCAAGGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp CCCACCTGCAGACACCCTGCTGCCAGAACTCCAACAGGTCCCCGAGGTAGCGAGTCACATACATACTCTTaGACTATGGGGACCAAGTCT +
Preference number: 4 (lower is better)
Translates to: PTCRHPAARTPTGPRGSESHTYS*TMGTKS
Trigger: AGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGA...CTCGCTACCTCGGGGACCTGTTGGAGTTCTGGCAGCAGGGTGTCTGCAGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCAGGGTCCTTCAGGTTCCCAAACTTaGGACAGTGAGTGTGACCCC +
Preference number: 4 (lower is better)
Translates to: SQTGNGTLPALLLKSQGPSGSQT*DSECDP
Trigger: GGGGTCACACTCACTGTCCCAAGTTTGGGAACCTGA...AGGACCCTGGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTTCGTTCTTGCCAAGGCCCAGACATACGCGTaGAATCTGAACACCCAACGC +
Preference number: 4 (lower is better)
Translates to: HGDPSEQGGFITPFVLAKAQTYA*NLNTQR
Trigger: GCGTTGGGTGTTCAGATTCCACGCGTATGTCTGGGC...CTTGGCAAGAACGAAAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp GGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATAGTTAGGGCGGGGAAACCCTaGATATTTCACTCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: GTVLQPCALVSLSVVPIVRAGKP*IFHSEV
Trigger: CACTTCAGAGTGAAATATCCAGGGTTTCCCCGCCCT...AACTATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CACTTGGCTTTGGACTCCATCGGTCATCTTTACGCAAGAGCAGAGATGAACGGTGGGCTGTGTGCTGCCTaGGCAGGCTGGACATGTCCA +
Preference number: 4 (lower is better)
Translates to: HLALDSIGHLYARAEMNGGLCAA*AGWTCP
Trigger: TGGACATGTCCAGCCTGCCCAGGCAGCACACAGCCC...ACCGTTCATCTCTGCTCTTGCGTAAAGATGACCGATGGAGTCCAAAGCCAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp GCGATGAGGTCATCACGCAGGAGGAAATCTCACCCACACGAGGTGGACTTACAGGAGGGAGGGAGGCTGTaGAATGAGACAGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: AMRSSRRRKSHPHEVDLQEGGRL*NETAEM
Trigger: CATCTCTGCTGTCTCATTCCACAGCCTCCCTCCCTC...CTGTAAGTCCACCTCGTGTGGGTGAGATTTCCTCCTGCGTGATGACCTCATCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGCGCTATGCTCTTCCTTaGTCTGTAAGGACTGGATGC +
Preference number: 4 (lower is better)
Translates to: SWSLSASGIRVWGKAEGRRYALP*SVRTGC
Trigger: GCATCCAGTCCTTACAGACCAAGGAAGAGCATAGCG...CCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp AGTAGACATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCGCTGGGCTACAGAAGTaGCCTCTGGGGAATCTGGAG +
Preference number: 4 (lower is better)
Translates to: SRHFLKHQTDTSHPPSPSAGLQK*PLGNLE
Trigger: CTCCAGATTCCCCAGAGGCCACTTCTGTAGCCCAGC...GGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATGTCTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGCTGTGGTCGTTTTCCTaGAGATTGCGACCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: SWSLSASGIRVWGKAEGRLWSFS*RLRPRK
Trigger: CTTCCTAGGTCGCAATCTCCAGGAAAACGACCACAG...CCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp AATGAGGACACCTCCACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTGCCGTAGGGGTCCTGTaGTTTTCTAGGCGCTTCACA +
Preference number: 4 (lower is better)
Translates to: NEDTSTETLPSREVSSHLAVGVL*FSRRFT
Trigger: TGTGAAGCGCCTAGAAAACCACAGGACCCCTACGGC...AAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372406.5
CDS-3UTR TCA 90 bp TTGCCAAGGAGTCTATCGCCTCATCCACAACATCTGCTTGCGGGAGAAACAGCAGCCTCACATCATCCTTaGGTGCCAGGTGATGGACGC +
Preference number: 4 (lower is better)
Translates to: LPRSLSPHPQHLLAGETAASHHP*VPGDGR
Trigger: GCGTCCATCACCTGGCACTCAAGGATGATGTGAGGC...TGCTGTTTCTCCCGCAAGCAGATGTTGTGGATGAGGCGATAGACTCCTTGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTTCGTTCTTGCCAAGGGTCTGGTTGCCTGCTaGAGCAGGGTTAACATTAGG +
Preference number: 4 (lower is better)
Translates to: HGDPSEQGGFITPFVLAKGLVAC*SRVNIR
Trigger: CCTAATGTTAACCCTGCTTCAGCAGGCAACCAGACC...CTTGGCAAGAACGAAAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp GTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGAGGAATTTCTCCTGCTaGGAGGTAGCTGTCAGGATT +
Preference number: 4 (lower is better)
Translates to: VLVTLSIWNKGLGQSRGQRNFSC*EVAVRI
Trigger: AATCCTGACAGCTACCTCTCAGCAGGAGAAATTCCT...CTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp CAGGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCCCTCCCATTCCCGCCTaGAAGAGGATCCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: QESWGRCYILNWVLTLLSPPIPA*KRIQLP
Trigger: AGGCAGCTGGATCCTCTTTCAGGCGGGAATGGGAGG...GGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp GGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAACGGCCATGCTGTGAGTaGGCCCAGACATACGCGTGG +
Preference number: 4 (lower is better)
Translates to: GILGQVLHPKLGFDFAFQRPCCE*AQTYAW
Trigger: CCACGCGTATGTCTGGGCTCACTCACAGCATGGCCG...TTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CTGCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGTCACGGCTATGACGTaGAGGAGAAAGAGAAGACAC +
Preference number: 4 (lower is better)
Translates to: LLSWSLSASGIRVWGKAEVTAMT*RRKRRH
Trigger: GTGTCTTCTCTTTCTCCTTCACGTCATAGCCGTGAC...CTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTGTCACGGCTATGACGTaGAGGAGAAAGAGAAGACAC +
Preference number: 4 (lower is better)
Translates to: LLWAVREWMSRQRHRIMLVTAMT*RRKRRH
Trigger: GTGTCTTCTCTTTCTCCTTCACGTCATAGCCGTGAC...AAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TGTTTCATTCTGACCATTCTGACTCTGCCCAGAACGCCGTCCCACCTGCAGACAAGAAAAGCAGCGGGGTaGAGTGTGGAGTGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: CFILTILTLPRTPSHLQTRKAAG*SVECGS
Trigger: GCTTCCACACTCCACACTTCACCCCGCTGCTTTTCT...TGTCTGCAGGTGGGACGGCGTTCTGGGCAGAGTCAGAATGGTCAGAATGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CTGCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGTGTCGGGCCACTGATTaGACTGATTTCACTGAGCGT +
Preference number: 4 (lower is better)
Translates to: LLSWSLSASGIRVWGKAECRATD*TDFTER
Trigger: ACGCTCAGTGAAATCAGTTCAATCAGTGGCCCGACA...CTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372406.5
CDS-3UTR TCA 90 bp CCAAAGGCTCCCAGCAGGGGAATGATAAACACACCGCGTCTTAGGTTATTTCCTGCAGCCACGAAATGCTaGGAGCAGCCGACCCGATTC +
Preference number: 4 (lower is better)
Translates to: PKAPSRGMINTPRLRLFPAATKC*EQPTRF
Trigger: GAATCGGGTCGGCTGCTCTCAGCATTTCGTGGCTGC...AGGAAATAACCTAAGACGCGGTGTGTTTATCATTCCCCTGCTGGGAGCCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR TCA 90 bp CCAGGGCTGGGGGCAGAACACTTGATACCAGTGAACCAAGAAGGGAAAACTCTGCCCTGTTCTCCCTCGTaGACTGGCCACGTATATTCC +
Preference number: 4 (lower is better)
Translates to: PGLGAEHLIPVNQEGKTLPCSPS*TGHVYS
Trigger: GGAATATACGTGGCCAGTTCACGAGGGAGAACAGGG...CAGAGTTTTCCCTTCTTGGTTCACTGGTATCAAGTGTTCTGCCCCCAGCCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR TCA 90 bp TTCCTCTGCATGGGGAGATGCTGTTTGGCGCCCGCTGGCAGGACCTGCCTTCCTACGATAGAGGATGTCTaGGGATCATTAGCAGACTTA +
Preference number: 4 (lower is better)
Translates to: FLCMGRCCLAPAGRTCLPTIEDV*GSLADL
Trigger: TAAGTCTGCTAATGATCCTCAGACATCCTCTATCGT...AGGAAGGCAGGTCCTGCCAGCGGGCGCCAAACAGCATCTCCCCATGCAGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR GCA 90 bp CCCAGAATGAGCCTATGTGGGATCAATAGGCACGGGGAGAAAGATGGCAGAGAACACATCATCCTTGAGTaGCAGGTGATGGACGCGGCC +
Preference number: 4 (lower is better)
Translates to: PRMSLCGINRHGEKDGREHIILE*QVMDAA
Trigger: GGCCGCGTCCATCACCTGGCACTCAAGGATGATGTG...TTCTCTGCCATCTTTCTCCCCGTGCCTATTGATCCCACATAGGCTCATTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CGGACGGACCAAGCCAAAGGCTCCCAGCAGGGGAATGATAAACACACCGCGTCTGATGTAGGCTACATTTaGCAGGACCTGGAGTGGAAT +
Preference number: 4 (lower is better)
Translates to: RTDQAKGSQQGNDKHTASDVGYI*QDLEWN
Trigger: ATTCCACTCCAGGTCCTGGCAAATGTAGCCTACATC...AGACGCGGTGTGTTTATCATTCCCCTGCTGGGAGCCTTTGGCTTGGTCCGTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR GCA 90 bp CTGCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGTTCACTGTAGGAGCTaGTCCTGCTGTCCAATAGGA +
Preference number: 4 (lower is better)
Translates to: LLSWSLSASGIRVWGKAEVHCRS*SCCPIG
Trigger: TCCTATTGGACAGCAGGAGCAGCTCCTACAGTGAAC...CTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp CAGGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCCTGGGCCTCAGGAGCTaGTGTCCTGGTCACTCTCAG +
Preference number: 4 (lower is better)
Translates to: QESWGRCYILNWVLTLLSLGLRS*CPGHSQ
Trigger: CTGAGAGTGACCAGGACAGCAGCTCCTGAGGCCCAG...GGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp TTTTTGTCTCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCACCTCCCACCACCTGTaGTGTGCCACAGGGCATGAT +
Preference number: 4 (lower is better)
Translates to: FLSPKQAMALSPPFFLSPTSHHL*CATGHD
Trigger: ATCATGCCCTGTGGCACAGCACAGGTGGTGGGAGGT...GGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGAGACAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp GGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATAGTTTATTCTGCCCCCAGCTaGTCCTTGAGGAAAACTTTC +
Preference number: 4 (lower is better)
Translates to: GTVLQPCALVSLSVVPIVYSAPS*SLRKTF
Trigger: GAAAGTTTTCCTCAAGGAGCAGCTGGGGGCAGAATA...AACTATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp TCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGTATTCTGCCCCCAGCTaGTCCTTGAGGAAAACTTTC +
Preference number: 4 (lower is better)
Translates to: SWSLSASGIRVWGKAEGRYSAPS*SLRKTF
Trigger: GAAAGTTTTCCTCAAGGAGCAGCTGGGGGCAGAATA...CCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp CAGGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCGCCTGGGAAGGCGCTTaGTCTTCCTCCACATCAGCC +
Preference number: 4 (lower is better)
Translates to: QESWGRCYILNWVLTLLSAWEGA*SSSTSA
Trigger: GGCTGATGTGGAGGAAGAGCAAGCGCCTTCCCAGGC...GGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp AACCACGCAGAGAGGCTCAGATGCATCGCTGGGCTACAGAAGTGGCCTCTGGGGAGACACACGGATGCTTaGCTAAAATATCTGCCGAGA +
Preference number: 4 (lower is better)
Translates to: NHAERLRCIAGLQKWPLGRHTDA*LKYLPR
Trigger: TCTCGGCAGATATTTTAGGCAAGCATCCGTGTGTCT...CCCCAGAGGCCACTTCTGTAGCCCAGCGATGCATCTGAGCCTCTCTGCGTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTTCGTTCTTGCCAAGCTTGGAACCACCACCTaGTTTCCCAATCTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: HGDPSEQGGFITPFVLAKLGTTT*FPNLGL
Trigger: CAGCCCAAGATTGGGAAAGCAGGTGGTGGTTCCAAG...CTTGGCAAGAACGAAAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CCCACCTGCAGACACCCTGCTGCCAGAACTCCAACAGGTCCCCGAGGTAGCGAGTACCACCAATGGTTCTaGTATGTGCATCCGATATTT +
Preference number: 4 (lower is better)
Translates to: PTCRHPAARTPTGPRGSEYHQWF*YVHPIF
Trigger: AAATATCGGATGCACATAGCAGAACCATTGGTGGTA...CTCGCTACCTCGGGGACCTGTTGGAGTTCTGGCAGCAGGGTGTCTGCAGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CACTTGGCTTTGGACTCCATCGGTCATCTTTACGCAAGAGCAGAGATGAACGGTACTTACAGGGCTGTGTaGTGCCTGGGCAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: HLALDSIGHLYARAEMNGTYRAV*CLGRLD
Trigger: GTCCAGCCTGCCCAGGCAGCACACAGCCCTGTAAGT...ACCGTTCATCTCTGCTCTTGCGTAAAGATGACCGATGGAGTCCAAAGCCAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCAGGGTCCTAGGCCAGAATGCATCTaGAATTCCAACAGGCATCGC +
Preference number: 4 (lower is better)
Translates to: SQTGNGTLPALLLKSQGPRPECI*NSNRHR
Trigger: GCGATGCCTGTTGGAATTGCAGATGCATTCTGGCCT...AGGACCCTGGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp GACAGTGCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATGTCAACTCAGGTAGATaGCTTTTAAAAACGCCCTGC +
Preference number: 4 (lower is better)
Translates to: DSAALGCQGVDVQATPQDVNSGR*LLKTPC
Trigger: GCAGGGCGTTTTTAAAAGGCATCTACCTGAGTTGAC...ATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGCACTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTTCGTTCTTGCCAAGATGCCCATTCACTCCTaGACCATCTCAGTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: HGDPSEQGGFITPFVLAKMPIHS*TISVCS
Trigger: GGAGCACACTGAGATGGTGCAGGAGTGAATGGGCAT...CTTGGCAAGAACGAAAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CCCAGAATGAGCCTATGTGGGATCAATAGGCACGGGGAGAAAGATGGCAGAGAAAGCGAGGCCAAGCCATaGCCATTCACTCCTGCACCA +
Preference number: 4 (lower is better)
Translates to: PRMSLCGINRHGEKDGRESEAKP*PFTPAP
Trigger: TGGTGCAGGAGTGAATGGGCATGGCTTGGCCTCGCT...TTCTCTGCCATCTTTCTCCCCGTGCCTATTGATCCCACATAGGCTCATTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGTGCTATTTACAGACCTaGAAGCCCTCCCTCAAACGA +
Preference number: 4 (lower is better)
Translates to: SWSLSASGIRVWGKAEGRCYLQT*KPSLKR
Trigger: TCGTTTGAGGGAGGGCTTGCAGGTCTGTAAATAGCA...CCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp AATAGAGAGTCCTTCCACAAGCCATATTCAGTCGTGCCCTCCTCGGTGGACTCTCGCTCGGCTTCTAGCTaGCTACCCAAAGAACCCCGT +
Preference number: 4 (lower is better)
Translates to: NRESFHKPYSVVPSSVDSRSASS*LPKEPR
Trigger: ACGGGGTTCTTTGGGTAGGCAGCTAGAAGCCGAGCG...AGAGTCCACCGAGGAGGGCACGACTGAATATGGCTTGTGGAAGGACTCTCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR CCA 90 bp CTGCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGCAAAGAAGACCAGTGTaGCCGTTTCATCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: LLSWSLSASGIRVWGKAEQRRPV*PFHPGA
Trigger: AGCTCCTGGATGAAACGGCCACACTGGTCTTCTTTG...CTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp TCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCAGGGTCCTGCCTTCTTTTCCTGTTaGAAAGAAGACCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: SQTGNGTLPALLLKSQGPAFFSC*KEDHWA
Trigger: GGCCCAGTGGTCTTCTTTCCAACAGGAAAAGAAGGC...AGGACCCTGGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp CAGGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCTGGGCTGTCAGGGAGTaGATGTCCAGGCAACGCCAC +
Preference number: 4 (lower is better)
Translates to: QESWGRCYILNWVLTLLSWAVRE*MSRQRH
Trigger: GTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCA...GGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp TTTTTGTCTCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCCAGACAGTGCTGCTCTaGGCTGTCAGGGAGTGGATG +
Preference number: 4 (lower is better)
Translates to: FLSPKQAMALSPPFFLSPQTVLL*AVREWM
Trigger: CATCCACTCCCTGACAGCCCAGAGCAGCACTGTCTG...GGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGAGACAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp CACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTTCGTTCTTGCCAAGGTGGGCTCCAGCTTTTaGAAGCAACCCTACCTAGCT +
Preference number: 4 (lower is better)
Translates to: HGDPSEQGGFITPFVLAKVGSSF*KQPYLA
Trigger: AGCTAGGTAGGGTTGCTTCCAAAAGCTGGAGCCCAC...CTTGGCAAGAACGAAAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp GCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGGAAGCCACTTGGCTTTaGACTCCATCGGTCATCTTT +
Preference number: 4 (lower is better)
Translates to: AVLVTLSIWNKGLGQSRGEATWL*TPSVIF
Trigger: AAAGATGACCGATGGAGTCCAAAGCCAAGTGGCTTC...CCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TTGCAAAACCCAGCATGTGAAATGAGGACACCTCCACGGAGACCCTTCCGAGCAGCTGGTGAAGCCACTTaGCTTTGGACTCCATCGGTC +
Preference number: 4 (lower is better)
Translates to: LQNPACEMRTPPRRPFRAAGEAT*LWTPSV
Trigger: GACCGATGGAGTCCAAAGCCAAGTGGCTTCACCAGC...TGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATTTCACATGCTGGGTTTTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CCGCGGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATTTCTCAGAGGAAACATaGATATTTTGCGTAGGCAGA +
Preference number: 4 (lower is better)
Translates to: PRHCAPAMCPGVTVGGANFSEET*IFCVGR
Trigger: TCTGCCTACGCAAAATATCCATGTTTCCTCTGAGAA...ATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCCGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCAGGGTCCTCACCCTAGGGAAAACTaGAGTGAAGAGCGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: SQTGNGTLPALLLKSQGPHPREN*SEERVF
Trigger: AAAGACCCGCTCTTCACTCCAGTTTTCCCTAGGGTG...AGGACCCTGGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CCCAGAATGAGCCTATGTGGGATCAATAGGCACGGGGAGAAAGATGGCAGAGAAGGCCTCTGGGGAATCTaGAGTATGTTCAGCCTGCCG +
Preference number: 4 (lower is better)
Translates to: PRMSLCGINRHGEKDGREGLWGI*SMFSLP
Trigger: CGGCAGGCTGAACATACTCCAGATTCCCCAGAGGCC...TTCTCTGCCATCTTTCTCCCCGTGCCTATTGATCCCACATAGGCTCATTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp GCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTACAGAAGTGGCCTCTaGGGAATCTGGAGTATGTTC +
Preference number: 4 (lower is better)
Translates to: AALGCQGVDVQATPQDNAYRSGL*GIWSMF
Trigger: GAACATACTCCAGATTCCCCAGAGGCCACTTCTGTA...AGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR CAA 72 bp CCTCTCTCTAGTTCCTCCACTGCCTGGCTTCCTCGCTaGCAAAACCCAGCATGTGAAATGAGGACACCTCCA +
Preference number: 4 (lower is better)
Translates to: PLSSSSTAWLPR*QNPACEMRTPP
Trigger: TGGAGGTGTCCTCATTTCACATGCTGGGTTTTGCAAGCGAGGAAGCCAGGCAGTGGAGGAACTAGAGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CATGCTCACTTTCTTCACATACATACTCTTGGACTATGGGGACCAAGTCTGTTGTCCTTGAGTGCCAGGTaGTGGACGCGGCCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: HAHFLHIHTLGLWGPSLLSLSAR*WTRPRP
Trigger: TGGCCTGGGCCGCGTCCATCACCTGGCACTCAAGGA...CAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGAGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp GCGATGAGGTCATCACGCAGGAGGAAATCTCACCCACACGAGGTGGACTTACAGTCAGTGAGAGGCTACTaGCATTCACCACCATGTACC +
Preference number: 4 (lower is better)
Translates to: AMRSSRRRKSHPHEVDLQSVRGY*HSPPCT
Trigger: GGTACATGGTGGTGAATGTCAGTAGCCTCTCACTGA...CTGTAAGTCCACCTCGTGTGGGTGAGATTTCCTCCTGCGTGATGACCTCATCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp GACAGTGCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATCTAGGATTAAAAGGGTaGCAGAGACAGACTGTTTCT +
Preference number: 4 (lower is better)
Translates to: DSAALGCQGVDVQATPQDLGLKG*QRQTVS
Trigger: AGAAACAGTCTGTCTCTGTCACCCTTTTAATCCTAG...ATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGCACTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp CGGACGGACCAAGCCAAAGGCTCCCAGCAGGGGAATGATAAACACACCGCGTCTCTCTCCCATGGCCTTTaGATCCACTGTACTTCTTTT +
Preference number: 4 (lower is better)
Translates to: RTDQAKGSQQGNDKHTASLSHGL*IHCTSF
Trigger: AAAAGAAGTACAGTGGATTCAAAGGCCATGGGAGAG...AGACGCGGTGTGTTTATCATTCCCCTGCTGGGAGCCTTTGGCTTGGTCCGTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR TCA 90 bp CGGACGGACCAAGCCAAAGGCTCCCAGCAGGGGAATGATAAACACACCGCGTCTCGTTTTCGAAGGATATaGATCCAGATGGTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: RTDQAKGSQQGNDKHTASRFRRI*IQMVPE
Trigger: TTCTGGGACCATCTGGATTCATATCCTTCGAAAACG...AGACGCGGTGTGTTTATCATTCCCCTGCTGGGAGCCTTTGGCTTGGTCCGTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR TCA 90 bp GCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCTTCTTGTAAATGTCTaGTTGACCACACCACTGGGA +
Preference number: 4 (lower is better)
Translates to: AVLVTLSIWNKGLGQSRGLLVNV*LTTPLG
Trigger: TCCCAGTGGTGTGGTCAATCAGACATTTACAAGAAG...CCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp AACCACGCAGAGAGGCTCAGATGCATCGCTGGGCTACAGAAGTGGCCTCTGGGGTCACAATGTACCTTCTaGGCTTGTCCTACTATTCAG +
Preference number: 4 (lower is better)
Translates to: NHAERLRCIAGLQKWPLGSQCTF*ACPTIQ
Trigger: CTGAATAGTAGGACAAGCTCAGAAGGTACATTGTGA...CCCCAGAGGCCACTTCTGTAGCCCAGCGATGCATCTGAGCCTCTCTGCGTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTCATTTACCTTTCTCCTaGAGATGGGAAGACACACGG +
Preference number: 4 (lower is better)
Translates to: LLWAVREWMSRQRHRIMLHLPFS*RWEDTR
Trigger: CCGTGTGTCTTCCCATCTTCAGGAGAAAGGTAAATG...AAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp ACCCACACGAGGTGGACTTACAGGGCTGTGTGCTGCCTGGGCAGGCTGGACATGTTGGTAGTCACAGATTaGGACACATTTCTGCGAAAA +
Preference number: 4 (lower is better)
Translates to: THTRWTYRAVCCLGRLDMLVVTD*DTFLRK
Trigger: TTTTCGCAGAAATGTGTCTCAATCTGTGACTACCAA...CATGTCCAGCCTGCCCAGGCAGCACACAGCCCTGTAAGTCCACCTCGTGTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CCGTCCTTGCTACACTTCCCCACACATGGGGTCACAACTGCATACACCTTAGAGGCAAAACCCAGCATGTaGAATGAGGACACCTCCACG +
Preference number: 4 (lower is better)
Translates to: PSLLHFPTHGVTTAYTLEAKPSM*NEDTST
Trigger: CGTGGAGGTGTCCTCATTTCACATGCTGGGTTTTGC...CTCTAAGGTGTATGCAGTTGTGACCCCATGTGTGGGGAAGTGTAGCAAGGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCACCTGTTTTCGTGTTCCCGTGCCAGTCTaGGGGCTGCGGCTCCAGCGC +
Preference number: 4 (lower is better)
Translates to: CYILNWVLTLLSKVTCFRVPVPV*GLRLQR
Trigger: GCGCTGGAGCCGCAGCCCTCAGACTGGCACGGGAAC...ACGAAAACAGGTGACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CCGTCCTTGCTACACTTCCCCACACATGGGGTCACAACTGCATACACCTTAGAGGGTGGGTCACGGCTATaGCGTGAAGGAGAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: PSLLHFPTHGVTTAYTLEGGSRL*REGERE
Trigger: TTCTCTTTCTCCTTCACGTCATAGCCGTGACCCACC...CTCTAAGGTGTATGCAGTTGTGACCCCATGTGTGGGGAAGTGTAGCAAGGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTTTTGAATGGCTTGTCAGCTGGTaGAGCCACTTGGCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: WAVREWMSRQRHRIMLFEWLVSW*SHLALD
Trigger: GTCCAAAGCCAAGTGGCTTCACCAGCTGACAAGCCA...TTCAAAAAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp AGTAGACATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCGTCAAAGCCCCCATGTaGACACGATTTCTGGACCCT +
Preference number: 4 (lower is better)
Translates to: SRHFLKHQTDTSHPPSPSVKAPM*TRFLDP
Trigger: AGGGTCCAGAAATCGTGTTCACATGGGGGCTTTGAC...GGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATGTCTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TTGCAAAACCCAGCATGTGAAATGAGGACACCTCCACGGAGACCCTTCCGAGCAAGATTCGCTCTCTGCTaGAGAGGTCCCATGCTGTCA +
Preference number: 4 (lower is better)
Translates to: LQNPACEMRTPPRRPFRARFALC*RGPMLS
Trigger: TGACAGCATGGGACCTCTTCAGCAGAGAGCGAATCT...TGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATTTCACATGCTGGGTTTTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCGGCTCGGCCAGCAACTaGAGCAAACCCAGCATTGGG +
Preference number: 4 (lower is better)
Translates to: SWGRCYILNWVLTLLSKVGSASN*SKPSIG
Trigger: CCCAATGCTGGGTTTGCTGCAGTTGCTGGCCGAGCC...GACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp CTGCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGATGTAGGCTACATTTaGCAGGACCTGGAGTGGAAT +
Preference number: 4 (lower is better)
Translates to: LLSWSLSASGIRVWGKAEDVGYI*QDLEWN
Trigger: ATTCCACTCCAGGTCCTGGCAAATGTAGCCTACATC...CTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp CCAGGGCTGGGGGCAGAACACTTGATACCAGTGAACCAAGAAGGGAAAACTCTGAGCCATATTCAGTCGTaGCCTCCTCGGTGGACTCTA +
Preference number: 4 (lower is better)
Translates to: PGLGAEHLIPVNQEGKTLSHIQS*PPRWTL
Trigger: TAGAGTCCACCGAGGAGGGCACGACTGAATATGGCT...CAGAGTTTTCCCTTCTTGGTTCACTGGTATCAAGTGTTCTGCCCCCAGCCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR GCA 90 bp CACTTGGCTTTGGACTCCATCGGTCATCTTTACGCAAGAGCAGAGATGAACGGTTGTGCTCCAGCCATGTaGCCTGGTGTCACTGTCGGT +
Preference number: 4 (lower is better)
Translates to: HLALDSIGHLYARAEMNGCAPAM*PGVTVG
Trigger: ACCGACAGTGACACCAGGGCACATGGCTGGAGCACA...ACCGTTCATCTCTGCTCTTGCGTAAAGATGACCGATGGAGTCCAAAGCCAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTTTTGAATCCACCAGCCGTCCTTaGTACACTTCCCCACACATG +
Preference number: 4 (lower is better)
Translates to: WAVREWMSRQRHRIMLFESTSRP*YTSPHM
Trigger: CATGTGTGGGGAAGTGTAGCAAGGACGGCTGGTGGA...TTCAAAAAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp CACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTTCGTTCTTGCCAAGGAATCCTGGGGCAGGTaGTACATCCTAAACTGGGTT +
Preference number: 4 (lower is better)
Translates to: HGDPSEQGGFITPFVLAKESWGR*YILNWV
Trigger: AACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTC...CTTGGCAAGAACGAAAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CTGCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGAAATACTACCTATTCTaGCCCCAGCTGCTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: LLSWSLSASGIRVWGKAEKYYLF*PQLLLE
Trigger: CTCAAGGAGCAGCTGGGGGCAGAATAGGTAGTATTT...CTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp CATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCACCAGCAAATACTACCTATTCTaGCCCCAGCTGCTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: HFLKHQTDTSHPPSPSTSKYYLF*PQLLLE
Trigger: CTCAAGGAGCAGCTGGGGGCAGAATAGGTAGTATTT...GCTGGTGGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp GCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGAGACACACGGATGCTTaGCTAAAATATCTGCCGAGA +
Preference number: 4 (lower is better)
Translates to: AVLVTLSIWNKGLGQSRGRHTDA*LKYLPR
Trigger: TCTCGGCAGATATTTTAGGCAAGCATCCGTGTGTCT...CCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp GGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATAGTTTCCACAACATCTGCTTaGGGGAGAAACAGCAAATGT +
Preference number: 4 (lower is better)
Translates to: GTVLQPCALVSLSVVPIVSTTSA*GRNSKC
Trigger: ACATTTGCTGTTTCTCCCGCAAGCAGATGTTGTGGA...AACTATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CTGCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGCTCATCCACAACATCTaGTTGCGGGAGAAACAGCAA +
Preference number: 4 (lower is better)
Translates to: LLSWSLSASGIRVWGKAELIHNI*LREKQQ
Trigger: TTGCTGTTTCTCCCGCAAGCAGATGTTGTGGATGAG...CTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp GGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAGGTCAGGACCAGCACTaGAGACACTCGGCCATGCTG +
Preference number: 4 (lower is better)
Translates to: GILGQVLHPKLGFDFAFQGQDQH*RHSAML
Trigger: CAGCATGGCCGAGTGTCTGCAGTGCTGGTCCTGACC...TTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CCGTCCTTGCTACACTTCCCCACACATGGGGTCACAACTGCATACACCTTAGAGATCTCATCTGTCCACTaGTGCTCTGGAAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: PSLLHFPTHGVTTAYTLEISSVH*CSGRVR
Trigger: CCTGACCCTTCCAGAGCAGCAGTGGACAGATGAGAT...CTCTAAGGTGTATGCAGTTGTGACCCCATGTGTGGGGAAGTGTAGCAAGGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CCGTCCTTGCTACACTTCCCCACACATGGGGTCACAACTGCATACACCTTAGAGCATGGCCAGATGACCTaGTTGTTAGGAAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PSLLHFPTHGVTTAYTLEHGQMT*LLGRLW
Trigger: CCACAGCCTTCCTAACAAGCAGGTCATCTGGCCATG...CTCTAAGGTGTATGCAGTTGTGACCCCATGTGTGGGGAAGTGTAGCAAGGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCAGGGTCCTGCTGGGAGAAAACGCTaGAATGCACCAAAGCCTTTA +
Preference number: 4 (lower is better)
Translates to: SQTGNGTLPALLLKSQGPAGRKR*NAPKPL
Trigger: TAAAGGCTTTGGTGCATTGCAGCGTTTTCTCCCAGC...AGGACCCTGGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTTTTGAAGTGTGGAAGCAGGGGTaGAGCAGTGTGCTAGATCTG +
Preference number: 4 (lower is better)
Translates to: WAVREWMSRQRHRIMLFEVWKQG*SSVLDL
Trigger: CAGATCTAGCACACTGCTGCACCCCTGCTTCCACAC...TTCAAAAAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp GGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATAGTTCTTTTAAAAACGCCCTaGCAGAAACACCCTAGGGAA +
Preference number: 4 (lower is better)
Translates to: GTVLQPCALVSLSVVPIVLLKTP*QKHPRE
Trigger: TTCCCTAGGGTGTTTCTGGCAGGGCGTTTTTAAAAG...AACTATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTTCGTTCTTGCCAAGGGAGTATGTTCAGCCTaGCGACCGATAACTACGTTC +
Preference number: 4 (lower is better)
Translates to: HGDPSEQGGFITPFVLAKGVCSA*RPITTF
Trigger: GAACGTAGTTATCGGTCGGCAGGCTGAACATACTCC...CTTGGCAAGAACGAAAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TTTTTGTCTCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCGCAGAGAGGCTCAGATaGATCGCTGGGCTACAGAAG +
Preference number: 4 (lower is better)
Translates to: FLSPKQAMALSPPFFLSPAERLR*IAGLQK
Trigger: CTTCTGTAGCCCAGCGATGCATCTGAGCCTCTCTGC...GGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGAGACAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CCGTCCTTGCTACACTTCCCCACACATGGGGTCACAACTGCATACACCTTAGAGATGCCCATTCACTCCTaGACCATCTCAGTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: PSLLHFPTHGVTTAYTLEMPIHS*TISVCS
Trigger: GGAGCACACTGAGATGGTGCAGGAGTGAATGGGCAT...CTCTAAGGTGTATGCAGTTGTGACCCCATGTGTGGGGAAGTGTAGCAAGGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTTCGTTCTTGCCAAGGCTGAAGAGGTCCCATaGTGTCACCTTTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: HGDPSEQGGFITPFVLAKAEEVP*CHLFHL
Trigger: CAGATGGAAAAGGTGACAGCATGGGACCTCTTCAGC...CTTGGCAAGAACGAAAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp GGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATAGTTATGATCTTTGGTAACTaGGTACCAGCTTCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: GTVLQPCALVSLSVVPIVMIFGN*VPASGG
Trigger: TCCACCAGAAGCTGGTACCCAGTTACCAAAGATCAT...AACTATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp TCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGATGATCTTTGGTAACTaGGTACCAGCTTCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: SWSLSASGIRVWGKAEGRMIFGN*VPASGG
Trigger: TCCACCAGAAGCTGGTACCCAGTTACCAAAGATCAT...CCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp CCCAGAATGAGCCTATGTGGGATCAATAGGCACGGGGAGAAAGATGGCAGAGAATGTGTCTTCTGGGTCTaGTTGCCTGCTGAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PRMSLCGINRHGEKDGRECVFWV*LPAEAG
Trigger: CCCTGCTTCAGCAGGCAACCAGACCCAGAAGACACA...TTCTCTGCCATCTTTCTCCCCGTGCCTATTGATCCCACATAGGCTCATTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTTCGTTCTTGCCAAGCCATCTTGTGTCTTCTaGGTCTGGTTGCCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: HGDPSEQGGFITPFVLAKPSCVF*VWLPAE
Trigger: TTCAGCAGGCAACCAGACCCAGAAGACACAAGATGG...CTTGGCAAGAACGAAAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp GTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGAGGATTTCTCTCCCATaGCCTTTGAATCCACTGTAC +
Preference number: 4 (lower is better)
Translates to: VLVTLSIWNKGLGQSRGQRISLP*PLNPLY
Trigger: GTACAGTGGATTCAAAGGCCATGGGAGAGAAATCCT...CTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp TCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGTGCCAGGACCTGGAGTaGAATGACAATCATGAAGAT +
Preference number: 4 (lower is better)
Translates to: SWSLSASGIRVWGKAEGRCQDLE*NDNHED
Trigger: ATCTTCATGATTGTCATTCCACTCCAGGTCCTGGCA...CCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp AAGTATTTGCTTAAATACTACCTATTCTGCCCCCAGCTGCTCCTTGAGGAAAACCCTTCCCACTCGCCCTaGGGCTCCACGGAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: KYLLKYYLFCPQLLLEENPSHSP*GSTEPL
Trigger: CAACGGCTCCGTGGAGCCCCAGGGCGAGTGGGAAGG...GTTTTCCTCAAGGAGCAGCTGGGGGCAGAATAGGTAGTATTTAAGCAAATACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp GCGATGAGGTCATCACGCAGGAGGAAATCTCACCCACACGAGGTGGACTTACAGGTCACTCTCAGCATCTaGAATAAGGGTCTGGGGCAA +
Preference number: 4 (lower is better)
Translates to: AMRSSRRRKSHPHEVDLQVTLSI*NKGLGQ
Trigger: TTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGAC...CTGTAAGTCCACCTCGTGTGGGTGAGATTTCCTCCTGCGTGATGACCTCATCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CCCAGAATGAGCCTATGTGGGATCAATAGGCACGGGGAGAAAGATGGCAGAGAACAGGAGCTGCTGTCCTaGTCACTCTCAGCATCTGGA +
Preference number: 4 (lower is better)
Translates to: PRMSLCGINRHGEKDGREQELLS*SLSASG
Trigger: TCCAGATGCTGAGAGTGACCAGGACAGCAGCTCCTG...TTCTCTGCCATCTTTCTCCCCGTGCCTATTGATCCCACATAGGCTCATTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTTTTGAACAGGAGCTGCTGTCCTaGTCACTCTCAGCATCTGGA +
Preference number: 4 (lower is better)
Translates to: WAVREWMSRQRHRIMLFEQELLS*SLSASG
Trigger: TCCAGATGCTGAGAGTGACCAGGACAGCAGCTCCTG...TTCAAAAAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp GCGATGAGGTCATCACGCAGGAGGAAATCTCACCCACACGAGGTGGACTTACAGGCCTTCTTTTCCTGTTaGAAAGAAGACCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: AMRSSRRRKSHPHEVDLQAFFSC*KEDHWA
Trigger: GGCCCAGTGGTCTTCTTTCCAACAGGAAAAGAAGGC...CTGTAAGTCCACCTCGTGTGGGTGAGATTTCCTCCTGCGTGATGACCTCATCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TTGCCAAGGAGTCTATCGCCTCATCCACAACATCTGCTTGCGGGAGAAACAGCAGCCCAGACATACGCGTaGAATCTGAACACCCAACGC +
Preference number: 4 (lower is better)
Translates to: LPRSLSPHPQHLLAGETAAQTYA*NLNTQR
Trigger: GCGTTGGGTGTTCAGATTCCACGCGTATGTCTGGGC...TGCTGTTTCTCCCGCAAGCAGATGTTGTGGATGAGGCGATAGACTCCTTGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CCGTCCTTGCTACACTTCCCCACACATGGGGTCACAACTGCATACACCTTAGAGGTTCTACTGGGTGTATaGAGCTGGGCCAACAACCTC +
Preference number: 4 (lower is better)
Translates to: PSLLHFPTHGVTTAYTLEVLLGV*SWANNL
Trigger: GAGGTTGTTGGCCCAGCTCCATACACCCAGTAGAAC...CTCTAAGGTGTATGCAGTTGTGACCCCATGTGTGGGGAAGTGTAGCAAGGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CACTTGGCTTTGGACTCCATCGGTCATCTTTACGCAAGAGCAGAGATGAACGGTGATGTGTGGGGCCCATaGCCTGGCAGTGAACCATCT +
Preference number: 4 (lower is better)
Translates to: HLALDSIGHLYARAEMNGDVWGP*PGSEPS
Trigger: AGATGGTTCACTGCCAGGCCATGGGCCCCACACATC...ACCGTTCATCTCTGCTCTTGCGTAAAGATGACCGATGGAGTCCAAAGCCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp GGCAAAGGGGTCAGGGCTAAGGAAGAGGGAAGAAAGATTTCTTACACGGACTCCAAGCAGAGCTTAGCATaGGCCGAGTCTCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GKGVRAKEEGRKISYTDSKQSLA*AESQPL
Trigger: CAGAGGCTGAGACTCGGCCCATGCTAAGCTCTGCTT...GGAGTCCGTGTAAGAAATCTTTCTTCCCTCTTCCTTAGCCCTGACCCCTTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR TCA 90 bp TCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGCCAAAGGTGTTCAGATaGACTTTATGCCTCACATCA +
Preference number: 4 (lower is better)
Translates to: SWSLSASGIRVWGKAEGRPKVFR*TLCLTS
Trigger: TGATGTGAGGCATAAAGTTCATCTGAACACCTTTGG...CCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp CCCATTACGACTGTGGAGTACAATGCAGTAAAGGAGACGATGCTGCGACCCGGCCCATGTACCCATCCTTaGAGAAGCCAAAGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: PITTVEYNAVKETMLRPGPCTHP*RSQRCS
Trigger: TGAACACCTTTGGCTTCTTCAAGGATGGGTACATGG...GCCGGGTCGCAGCATCGTCTCCTTTACTGCATTGTACTCCACAGTCGTAATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR TCA 90 bp CCCAGAATGAGCCTATGTGGGATCAATAGGCACGGGGAGAAAGATGGCAGAGAAACAAAGCCACAAGCATaGAGGGAAGCCAGACAGTGC +
Preference number: 4 (lower is better)
Translates to: PRMSLCGINRHGEKDGRETKPQA*REARQC
Trigger: GCACTGTCTGGCTTCCCTTCATGCTTGTGGCTTTGT...TTCTCTGCCATCTTTCTCCCCGTGCCTATTGATCCCACATAGGCTCATTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TTGCCAAGGAGTCTATCGCCTCATCCACAACATCTGCTTGCGGGAGAAACAGCACCCCCAGCTGCTCCTTaGGGAAAACTTTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: LPRSLSPHPQHLLAGETAPPAAP*GKLSIS
Trigger: GGAAATGGAAAGTTTTCCTCAAGGAGCAGCTGGGGG...TGCTGTTTCTCCCGCAAGCAGATGTTGTGGATGAGGCGATAGACTCCTTGGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CTGCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGAGCATCTTTTACACTaGAGCAAGCATCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: LLSWSLSASGIRVWGKAEEHLLH*SKHLLT
Trigger: TGTGAGGAGATGCTTGCTTCAGTGTAAAAGATGCTC...CTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TTCCATAAAAGAGAGTACAAAATCAGGTTTCCGCGGCACTGTGCTCCAGCCATGCAGCAGAGATGGCGATaGGGTCATCACGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: FHKREYKIRFPRHCAPAMQQRWR*GHHAGG
Trigger: TCCTCCTGCGTGATGACCTCATCGCCATCTCTGCTG...CATGGCTGGAGCACAGTGCCGCGGAAACCTGATTTTGTACTCTCTTTTATGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TTGCAAAACCCAGCATGTGAAATGAGGACACCTCCACGGAGACCCTTCCGAGCAAGCAGCTTGGCAGCATaGAGCATGAGTTGTTCCACT +
Preference number: 4 (lower is better)
Translates to: LQNPACEMRTPPRRPFRASSLAA*SMSCST
Trigger: AGTGGAACAACTCATGCTTCATGCTGCCAAGCTGCT...TGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATTTCACATGCTGGGTTTTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TTTTTGTCTCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCGTCAAAGCCCCCATGTaGACACGATTTCTGGACCCT +
Preference number: 4 (lower is better)
Translates to: FLSPKQAMALSPPFFLSPVKAPM*TRFLDP
Trigger: AGGGTCCAGAAATCGTGTTCACATGGGGGCTTTGAC...GGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGAGACAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTTCGTTCTTGCCAAGTCTGCAAAAGCTGTTTaGAGAGTCAAAGCCCCCATG +
Preference number: 4 (lower is better)
Translates to: HGDPSEQGGFITPFVLAKSAKAV*RVKAPM
Trigger: CATGGGGGCTTTGACTCTTCAAACAGCTTTTGCAGA...CTTGGCAAGAACGAAAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CTGCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGATGTCTGACTTCTTTTaGGGTCACACGACTAGGCAA +
Preference number: 4 (lower is better)
Translates to: LLSWSLSASGIRVWGKAEMSDFF*GHTTRQ
Trigger: TTGCCTAGTCGTGTGACCTCAAAAGAAGTCAGACAT...CTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp AGGATGTGGGAAGCGGGAACCTCCCATTACGACTGTGGAGTACAATGCAGTAAATGCTGGTTGCCAGCCTaGCATGTGTGCCTCTTCAAC +
Preference number: 4 (lower is better)
Translates to: RMWEAGTSHYDCGVQCSKCWLPA*HVCLFN
Trigger: GTTGAAGAGGCACACATGTCAGGCTGGCAACCAGCA...TTTACTGCATTGTACTCCACAGTCGTAATGGGAGGTTCCCGCTTCCCACATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR TCA 90 bp CCAGGGCTGGGGGCAGAACACTTGATACCAGTGAACCAAGAAGGGAAAACTCTGGAAAGCAGGCTCCAATaGTGCTTAGTGGAACGGCAA +
Preference number: 4 (lower is better)
Translates to: PGLGAEHLIPVNQEGKTLESRLQ*CLVERQ
Trigger: TTGCCGTTCCACTAAGCATCATTGGAGCCTGCTTTC...CAGAGTTTTCCCTTCTTGGTTCACTGGTATCAAGTGTTCTGCCCCCAGCCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR TCA 90 bp CCCATTACGACTGTGGAGTACAATGCAGTAAAGGAGACGATGCTGCGACCCGGCCCGAGTCTCAGCCTCTaGATTGGGAAGAATTCAAAG +
Preference number: 4 (lower is better)
Translates to: PITTVEYNAVKETMLRPGPSLSL*IGKNSK
Trigger: CTTTGAATTCTTCCCAATTCAGAGGCTGAGACTCGG...GCCGGGTCGCAGCATCGTCTCCTTTACTGCATTGTACTCCACAGTCGTAATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR GCA 90 bp GGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAACACATCATCCTTGAGTaGCAGGTGATGGACGCGGCC +
Preference number: 4 (lower is better)
Translates to: GILGQVLHPKLGFDFAFQHIILE*QVMDAA
Trigger: GGCCGCGTCCATCACCTGGCACTCAAGGATGATGTG...TTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp AATGAGGACACCTCCACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTGATGTAGGCTACATTTaGCAGGACCTGGAGTGGAAT +
Preference number: 4 (lower is better)
Translates to: NEDTSTETLPSREVSSHLDVGYI*QDLEWN
Trigger: ATTCCACTCCAGGTCCTGGCAAATGTAGCCTACATC...AAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CATGCTCACTTTCTTCACATACATACTCTTGGACTATGGGGACCAAGTCTGTTGGTTTCCGCGGCACTGTaGTCCAGCCATGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: HAHFLHIHTLGLWGPSLLVSAAL*SSHVPW
Trigger: CCAGGGCACATGGCTGGAGCACAGTGCCGCGGAAAC...CAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGAGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CCGTCCTTGCTACACTTCCCCACACATGGGGTCACAACTGCATACACCTTAGAGGAATCCTGGGGCAGGTaGTACATCCTAAACTGGGTT +
Preference number: 4 (lower is better)
Translates to: PSLLHFPTHGVTTAYTLEESWGR*YILNWV
Trigger: AACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTC...CTCTAAGGTGTATGCAGTTGTGACCCCATGTGTGGGGAAGTGTAGCAAGGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp GAACAACCATGTTCTGAATGGAGACTTTTTCAGGTTCCCAAACTTGGGACAGTGTGCCAGTCTGAGGGCTaGGGCTCCAGCGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: EQPCSEWRLFQVPKLGTVCQSEG*GSSACP
Trigger: TGGACAAGCGCTGGAGCCGCAGCCCTCAGACTGGCA...CACTGTCCCAAGTTTGGGAACCTGAAAAAGTCTCCATTCAGAACATGGTTGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TTGCCAAGGAGTCTATCGCCTCATCCACAACATCTGCTTGCGGGAGAAACAGCACATGGCCAGATGACCTaGTTGTTAGGAAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LPRSLSPHPQHLLAGETAHGQMT*LLGRLW
Trigger: CCACAGCCTTCCTAACAAGCAGGTCATCTGGCCATG...TGCTGTTTCTCCCGCAAGCAGATGTTGTGGATGAGGCGATAGACTCCTTGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTTTTGAACTTGGAACCACCACCTaGTTTCCCAATCTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: WAVREWMSRQRHRIMLFELGTTT*FPNLGL
Trigger: CAGCCCAAGATTGGGAAAGCAGGTGGTGGTTCCAAG...TTCAAAAAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGCCCGATCTGAAATACTaGAAGGGCTTAACCATTCAA +
Preference number: 4 (lower is better)
Translates to: SWSLSASGIRVWGKAEGRPDLKY*KGLTIQ
Trigger: TTGAATGGTTAAGCCCTTGCAGTATTTCAGATCGGG...CCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTTCGTTCTTGCCAAGCATCTTTCACACAGCTaGTGGGAGAAAACGCTGCAA +
Preference number: 4 (lower is better)
Translates to: HGDPSEQGGFITPFVLAKHLSHS*WEKTLQ
Trigger: TTGCAGCGTTTTCTCCCAGCAGCTGTGTGAAAGATG...CTTGGCAAGAACGAAAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CACTTGGCTTTGGACTCCATCGGTCATCTTTACGCAAGAGCAGAGATGAACGGTGCAGAGAGGCTCAGATaGATCGCTGGGCTACAGAAG +
Preference number: 4 (lower is better)
Translates to: HLALDSIGHLYARAEMNGAERLR*IAGLQK
Trigger: CTTCTGTAGCCCAGCGATGCATCTGAGCCTCTCTGC...ACCGTTCATCTCTGCTCTTGCGTAAAGATGACCGATGGAGTCCAAAGCCAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TTCCATAAAAGAGAGTACAAAATCAGGTTTCCGCGGCACTGTGCTCCAGCCATGTGCACCATCTCAGTGTaGTCCCTCACACAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: FHKREYKIRFPRHCAPAMCTISV*SLTQGL
Trigger: CAGGCCCTGTGTGAGGGAGCACACTGAGATGGTGCA...CATGGCTGGAGCACAGTGCCGCGGAAACCTGATTTTGTACTCTCTTTTATGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp AATGAGGACACCTCCACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTACCGCCTCATCTGGCTaGTTCCTCCAAAATCCAAAA +
Preference number: 4 (lower is better)
Translates to: NEDTSTETLPSREVSSHLTASSG*FLQNPK
Trigger: TTTTGGATTTTGGAGGAAGCAGCCAGATGAGGCGGT...AAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTTCGTTCTTGCCAAGTGCTATTTACAGACCTaGAAGCCCTCCCTCAAACGA +
Preference number: 4 (lower is better)
Translates to: HGDPSEQGGFITPFVLAKCYLQT*KPSLKR
Trigger: TCGTTTGAGGGAGGGCTTGCAGGTCTGTAAATAGCA...CTTGGCAAGAACGAAAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CCGTCCTTGCTACACTTCCCCACACATGGGGTCACAACTGCATACACCTTAGAGGCTGAAGAGGTCCCATaGTGTCACCTTTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: PSLLHFPTHGVTTAYTLEAEEVP*CHLFHL
Trigger: CAGATGGAAAAGGTGACAGCATGGGACCTCTTCAGC...CTCTAAGGTGTATGCAGTTGTGACCCCATGTGTGGGGAAGTGTAGCAAGGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp CCCAGAATGAGCCTATGTGGGATCAATAGGCACGGGGAGAAAGATGGCAGAGAACAACCTATTGGCGGTTaGCATAACAACGGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: PRMSLCGINRHGEKDGREQPIGG*HNNGGR
Trigger: TCGGCCACCGTTGTTATGGCAACCGCCAATAGGTTG...TTCTCTGCCATCTTTCTCCCCGTGCCTATTGATCCCACATAGGCTCATTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372406.5
CDS-3UTR GCA 90 bp GTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGAATGGTGAGACTCTATaGGACTTCCTGCTCTTAGAT +
Preference number: 4 (lower is better)
Translates to: VLVTLSIWNKGLGQSRGQNGETL*DFLLLD
Trigger: ATCTAAGAGCAGGAAGTCGCATAGAGTCTCACCATT...CTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372406.5
ENST00000610997.1
CDS-3UTR GCA 90 bp CCAAAGGCTCCCAGCAGGGGAATGATAAACACACCGCGTCTTAGGTTATTTCCTGAAGAATTCAAAGGCTaGCAGGGCTGGGGGCAGAAC +
Preference number: 4 (lower is better)
Translates to: PKAPSRGMINTPRLRLFPEEFKG*QGWGQN
Trigger: GTTCTGCCCCCAGCCCTGGCAGCCTTTGAATTCTTC...AGGAAATAACCTAAGACGCGGTGTGTTTATCATTCCCCTGCTGGGAGCCTTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR CCA 90 bp ACCCACACGAGGTGGACTTACAGGGCTGTGTGCTGCCTGGGCAGGCTGGACATGCTCTTACCTCACTTCTaGAGATGTCTAGGATTAAAA +
Preference number: 4 (lower is better)
Translates to: THTRWTYRAVCCLGRLDMLLPHF*RCLGLK
Trigger: TTTTAATCCTAGACATCTCCAGAAGTGAGGTAAGAG...CATGTCCAGCCTGCCCAGGCAGCACACAGCCCTGTAAGTCCACCTCGTGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CTGCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGATGATCTTTGGTAACTaGGTACCAGCTTCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: LLSWSLSASGIRVWGKAEMIFGN*VPASGG
Trigger: TCCACCAGAAGCTGGTACCCAGTTACCAAAGATCAT...CTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp CTAGCTGCCTACCCAAAGAACCCCGTGTTATGCGGACGGACCAAGCCAAAGGCTATGATCTTTGGTAACTaGGTACCAGCTTCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: LAAYPKNPVLCGRTKPKAMIFGN*VPASGG
Trigger: TCCACCAGAAGCTGGTACCCAGTTACCAAAGATCAT...AGCCTTTGGCTTGGTCCGTCCGCATAACACGGGGTTCTTTGGGTAGGCAGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR CCA 90 bp GCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGGCCGCCATCAGCCAGTaGATTTTAAATACATCATTC +
Preference number: 4 (lower is better)
Translates to: AVLVTLSIWNKGLGQSRGAAISQ*ILNTSF
Trigger: GAATGATGTATTTAAAATCCACTGGCTGATGGCGGC...CCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp GGGCTCCAGTGTCCGCTTCCTTCTGCTAAAAATAGAGGAACCACCCCTGCAGCCTGCCAGGACCTGGAGTaGAATGACAATCATGAAGAT +
Preference number: 4 (lower is better)
Translates to: GLQCPLPSAKNRGTTPAACQDLE*NDNHED
Trigger: ATCTTCATGATTGTCATTCCACTCCAGGTCCTGGCA...GGCTGCAGGGGTGGTTCCTCTATTTTTAGCAGAAGGAAGCGGACACTGGAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR CCA 90 bp CATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCACCAGCACATTTGCCAGGACCTaGAGTGGAATGACAATCATG +
Preference number: 4 (lower is better)
Translates to: HFLKHQTDTSHPPSPSTSTFART*SGMTIM
Trigger: CATGATTGTCATTCCACTCCAGGTCCTGGCAAATGT...GCTGGTGGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp AGTAGACATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCCCACTTCCACTGGAATaGAACAGCGAGTTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: SRHFLKHQTDTSHPPSPSPLPLE*NSEFEE
Trigger: CTCCTCAAACTCGCTGTTCCATTCCAGTGGAAGTGG...GGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATGTCTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp GAGTCCTTCCACAAGCCATATTCAGTCGTGCCCTCCTCGGTGGACTCTATGATGCCACTTCCACTGGAATaGAACAGCGAGTTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: ESFHKPYSVVPSSVDSMMPLPLE*NSEFEE
Trigger: CTCCTCAAACTCGCTGTTCCATTCCAGTGGAAGTGG...CATCATAGAGTCCACCGAGGAGGGCACGACTGAATATGGCTTGTGGAAGGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR CCA 90 bp GAGTCCTTCCACAAGCCATATTCAGTCGTGCCCTCCTCGGTGGACTCTATGATGCAAAGAAGACCAGTGTaGCCGTTTCATCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: ESFHKPYSVVPSSVDSMMQRRPV*PFHPGA
Trigger: AGCTCCTGGATGAAACGGCCACACTGGTCTTCTTTG...CATCATAGAGTCCACCGAGGAGGGCACGACTGAATATGGCTTGTGGAAGGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR CCA 90 bp GCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCATACTCTTGGACTATaGGGACCAAGTCTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: AVLVTLSIWNKGLGQSRGHTLGL*GPSLLN
Trigger: ATTCAACAGACTTGGTCCCCATAGTCCAAGAGTATG...CCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp ACCTCCCACCACCTGTGCTGTGCCACAGGGCATGATCCTGACAGCGACATCACACAACCATGTTCTGAATaGAGACTTTTTCAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: TSHHLCCATGHDPDSDITQPCSE*RLFQVP
Trigger: GGGAACCTGAAAAAGTCTCCATTCAGAACATGGTTG...TGTGATGTCGCTGTCAGGATCATGCCCTGTGGCACAGCACAGGTGGTGGGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp GTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGAAGATAAGATAGCATaGGACAGGGAGAACAACCAT +
Preference number: 4 (lower is better)
Translates to: VLVTLSIWNKGLGQSRGQEDKIA*DRENNH
Trigger: ATGGTTGTTCTCCCTGTCCCATGCTATCTTATCTTC...CTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp ACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCAGGGTCGGCTCTAGAGGTGAGCAGCTGTaGCCTGGGAAGGCGCTTGCT +
Preference number: 4 (lower is better)
Translates to: TMNKLTVSLDSAILRVGSRGEQL*PGKALA
Trigger: AGCAAGCGCCTTCCCAGGCCACAGCTGCTCACCTCT...AGAGCCGACCCTGAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TTCCATAAAAGAGAGTACAAAATCAGGTTTCCGCGGCACTGTGCTCCAGCCATGTGTCCACTGCTGCTCTaGAAGGGTCAGGACCAGCAC +
Preference number: 4 (lower is better)
Translates to: FHKREYKIRFPRHCAPAMCPLLL*KGQDQH
Trigger: GTGCTGGTCCTGACCCTTCCAGAGCAGCAGTGGACA...CATGGCTGGAGCACAGTGCCGCGGAAACCTGATTTTGTACTCTCTTTTATGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCACCTGTTTTCGTGCTGCCTGGGCAGGCTaGACATGTCCAGGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: CYILNWVLTLLSKVTCFRAAWAG*TCPGRG
Trigger: TCCCCGCCCTGGACATGTCCAGCCTGCCCAGGCAGC...ACGAAAACAGGTGACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGACACCCATTTTAGTGTaGAGGAAGACCAGCCTATAT +
Preference number: 4 (lower is better)
Translates to: SWSLSASGIRVWGKAEGRTPILV*RKTSLY
Trigger: ATATAGGCTGGTCTTCCTCCACACTAAAATGGGTGT...CCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TTTTTGTCTCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCGTTCTACTGGGTGTATaGAGCTGGGCCAACAACCTC +
Preference number: 4 (lower is better)
Translates to: FLSPKQAMALSPPFFLSPVLLGV*SWANNL
Trigger: GAGGTTGTTGGCCCAGCTCCATACACCCAGTAGAAC...GGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGAGACAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTTTTGAAGTTCTACTGGGTGTATaGAGCTGGGCCAACAACCTC +
Preference number: 4 (lower is better)
Translates to: WAVREWMSRQRHRIMLFEVLLGV*SWANNL
Trigger: GAGGTTGTTGGCCCAGCTCCATACACCCAGTAGAAC...TTCAAAAAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCGGCCTCTGGGGAATCTaGAGTATGTTCAGCCTGCCG +
Preference number: 4 (lower is better)
Translates to: SWGRCYILNWVLTLLSKVGLWGI*SMFSLP
Trigger: CGGCAGGCTGAACATACTCCAGATTCCCCAGAGGCC...GACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp AATGAGGACACCTCCACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTTACAGAAGTGGCCTCTaGGGAATCTGGAGTATGTTC +
Preference number: 4 (lower is better)
Translates to: NEDTSTETLPSREVSSHLYRSGL*GIWSMF
Trigger: GAACATACTCCAGATTCCCCAGAGGCCACTTCTGTA...AAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TTCCATAAAAGAGAGTACAAAATCAGGTTTCCGCGGCACTGTGCTCCAGCCATGGCTGGGCTACAGAAGTaGCCTCTGGGGAATCTGGAG +
Preference number: 4 (lower is better)
Translates to: FHKREYKIRFPRHCAPAMAGLQK*PLGNLE
Trigger: CTCCAGATTCCCCAGAGGCCACTTCTGTAGCCCAGC...CATGGCTGGAGCACAGTGCCGCGGAAACCTGATTTTGTACTCTCTTTTATGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CCGTCCTTGCTACACTTCCCCACACATGGGGTCACAACTGCATACACCTTAGAGCTGTGGTCGTTTTCCTaGAGATTGCGACCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: PSLLHFPTHGVTTAYTLELWSFS*RLRPRK
Trigger: CTTCCTAGGTCGCAATCTCCAGGAAAACGACCACAG...CTCTAAGGTGTATGCAGTTGTGACCCCATGTGTGGGGAAGTGTAGCAAGGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp AATAGAGAGTCCTTCCACAAGCCATATTCAGTCGTGCCCTCCTCGGTGGACTCTGTTTCTTCCTCTGCATaGGGAGATGCTGTTTGGCGC +
Preference number: 4 (lower is better)
Translates to: NRESFHKPYSVVPSSVDSVSSSA*GDAVWR
Trigger: GCGCCAAACAGCATCTCCCCATGCAGAGGAAGAAAC...AGAGTCCACCGAGGAGGGCACGACTGAATATGGCTTGTGGAAGGACTCTCTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR CCA 90 bp CTTCATAATGCATCCAGGCTCCAAGATGTAACGGCTGAGGGAAAGGATGTGGGACTGAGGGAAAGGATGTaGGAAGCGGGAACCTCCCAT +
Preference number: 4 (lower is better)
Translates to: LHNASRLQDVTAEGKDVGLRERM*EAGTSH
Trigger: ATGGGAGGTTCCCGCTTCCCACATCCTTTCCCTCAG...TCCCACATCCTTTCCCTCAGCCGTTACATCTTGGAGCCTGGATGCATTATGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR TCA 90 bp CTGAAAACTCCTTCTGCATCCCAATCTCTAACCAGGAAAGCAAATGCTATTTACTCCTTGAGTGCCAGGTaGTGGACGCGGCCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: LKTPSASQSLTRKANAIYSLSAR*WTRPRP
Trigger: TGGCCTGGGCCGCGTCCATCACCTGGCACTCAAGGA...GTAAATAGCATTTGCTTTCCTGGTTAGAGATTGGGATGCAGAAGGAGTTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCAGGGTCCTCCAAAGGTGTTCAGATaGACTTTATGCCTCACATCA +
Preference number: 4 (lower is better)
Translates to: SQTGNGTLPALLLKSQGPPKVFR*TLCLTS
Trigger: TGATGTGAGGCATAAAGTTCATCTGAACACCTTTGG...AGGACCCTGGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp AGTAGACATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCCCATGTACCCATCCTTaGAGAAGCCAAAGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: SRHFLKHQTDTSHPPSPSPCTHP*RSQRCS
Trigger: TGAACACCTTTGGCTTCTTCAAGGATGGGTACATGG...GGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATGTCTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp CTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTCTAGGATTAAAAGGGTaGCAGAGACAGACTGTTTCT +
Preference number: 4 (lower is better)
Translates to: LLWAVREWMSRQRHRIMLLGLKG*QRQTVS
Trigger: AGAAACAGTCTGTCTCTGTCACCCTTTTAATCCTAG...AAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp GCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTATGTTAAAGAAAAACTaGAATGACACTGCCCCACCA +
Preference number: 4 (lower is better)
Translates to: AALGCQGVDVQATPQDNAMLKKN*NDTAPP
Trigger: TGGTGGGGCAGTGTCATTTCAGTTTTTCTTTAACAT...AGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp CCAGGGCTGGGGGCAGAACACTTGATACCAGTGAACCAAGAAGGGAAAACTCTGAGGAATTTCTCCTGCTaGGAGGTAGCTGTCAGGATT +
Preference number: 4 (lower is better)
Translates to: PGLGAEHLIPVNQEGKTLRNFSC*EVAVRI
Trigger: AATCCTGACAGCTACCTCTCAGCAGGAGAAATTCCT...CAGAGTTTTCCCTTCTTGGTTCACTGGTATCAAGTGTTCTGCCCCCAGCCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR TCA 90 bp CCGTCCTTGCTACACTTCCCCACACATGGGGTCACAACTGCATACACCTTAGAGAGGAATTTCTCCTGCTaGGAGGTAGCTGTCAGGATT +
Preference number: 4 (lower is better)
Translates to: PSLLHFPTHGVTTAYTLERNFSC*EVAVRI
Trigger: AATCCTGACAGCTACCTCTCAGCAGGAGAAATTCCT...CTCTAAGGTGTATGCAGTTGTGACCCCATGTGTGGGGAAGTGTAGCAAGGACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp GCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTTTCCCCCAAAATTCTaGTCAAACACAACAAAGCCA +
Preference number: 4 (lower is better)
Translates to: AALGCQGVDVQATPQDNAFPPKF*SNTTKP
Trigger: TGGCTTTGTTGTGTTTGATCAGAATTTTGGGGGAAA...AGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp TTCCATAAAAGAGAGTACAAAATCAGGTTTCCGCGGCACTGTGCTCCAGCCATGACCCAGCATGTGAAATaGGGACACCTCCACGGAGAC +
Preference number: 4 (lower is better)
Translates to: FHKREYKIRFPRHCAPAMTQHVK*GHLHGD
Trigger: GTCTCCGTGGAGGTGTCCTCATTTCACATGCTGGGT...CATGGCTGGAGCACAGTGCCGCGGAAACCTGATTTTGTACTCTCTTTTATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp GAGGGCTTTGGTAGTCACAGATTGAGACACATTTCTGCGAAAACTGGTATTATGCGGCCATGCTGTGAGTaGGCCCAGACATACGCGTGG +
Preference number: 4 (lower is better)
Translates to: EGFGSHRLRHISAKTGIMRPCCE*AQTYAW
Trigger: CCACGCGTATGTCTGGGCTCACTCACAGCATGGCCG...CATAATACCAGTTTTCGCAGAAATGTGTCTCAATCTGTGACTACCAAAGCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CAGGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCGGTGGGTCACGGCTATaGCGTGAAGGAGAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: QESWGRCYILNWVLTLLSGGSRL*REGERE
Trigger: TTCTCTTTCTCCTTCACGTCATAGCCGTGACCCACC...GGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp GGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAACGCAAGAGCAGAGATaGACGGTGGGTCACGGCTAT +
Preference number: 4 (lower is better)
Translates to: GILGQVLHPKLGFDFAFQTQEQR*TVGHGY
Trigger: ATAGCCGTGACCCACCGTTCATCTCTGCTCTTGCGT...TTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp GGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATAGTTAAGCCATTAACTTGCTaGATCCTAAAGGGAAGAATC +
Preference number: 4 (lower is better)
Translates to: GTVLQPCALVSLSVVPIVKPLTC*ILKGRI
Trigger: GATTCTTCCCTTTAGGATTCAGCAAGTTAATGGCTT...AACTATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp GGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTTTCCTTGGACAGTaGCATCCTCAGGGTCGGCTC +
Preference number: 4 (lower is better)
Translates to: GILGQVLHPKLGFDFAFQSFLGQ*HPQGRL
Trigger: GAGCCGACCCTGAGGATGGCACTGTCCAAGGAAACT...TTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp TTTTTGTCTCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCGTTCACTGTAGGAGCTaGTCCTGCTGTCCAATAGGA +
Preference number: 4 (lower is better)
Translates to: FLSPKQAMALSPPFFLSPVHCRS*SCCPIG
Trigger: TCCTATTGGACAGCAGGAGCAGCTCCTACAGTGAAC...GGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGAGACAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp TTGCAAAACCCAGCATGTGAAATGAGGACACCTCCACGGAGACCCTTCCGAGCAGGGAAGACACACGGATaGTTGCCTAAAATATCTGCC +
Preference number: 4 (lower is better)
Translates to: LQNPACEMRTPPRRPFRAGKTHG*LPKISA
Trigger: GGCAGATATTTTAGGCAAGCATCCGTGTGTCTTCCC...TGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATTTCACATGCTGGGTTTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp GTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGAGTGAACACTTAGGGTaGATTTACCTTTCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: VLVTLSIWNKGLGQSRGQSEHLG*IYLSPE
Trigger: TTCAGGAGAAAGGTAAATGCACCCTAAGTGTTCACT...CTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp GGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAGTCCACACACACGCCTaGCTCTCTCTAGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GILGQVLHPKLGFDFAFQVHTHA*LSLVPP
Trigger: TGGAGGAACTAGAGAGAGGCAGGCGTGTGTGTGGAC...TTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CACTTGGCTTTGGACTCCATCGGTCATCTTTACGCAAGAGCAGAGATGAACGGTATCTCATCTGTCCACTaGTGCTCTGGAAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: HLALDSIGHLYARAEMNGISSVH*CSGRVR
Trigger: CCTGACCCTTCCAGAGCAGCAGTGGACAGATGAGAT...ACCGTTCATCTCTGCTCTTGCGTAAAGATGACCGATGGAGTCCAAAGCCAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp AGTAGACATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCCAACAGGCATCGCTATaGTCTTCCTTGGTCTGTAAG +
Preference number: 4 (lower is better)
Translates to: SRHFLKHQTDTSHPPSPSQQASL*SSLVCK
Trigger: CTTACAGACCAAGGAAGAGCATAGCGATGCCTGTTG...GGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATGTCTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CCAAAGGCTCCCAGCAGGGGAATGATAAACACACCGCGTCTTAGGTTATTTCCTAAGAACCCCGTGTTATaGGGACGGACCAAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: PKAPSRGMINTPRLRLFPKNPVL*GRTKPK
Trigger: CTTTGGCTTGGTCCGTCCGCATAACACGGGGTTCTT...AGGAAATAACCTAAGACGCGGTGTGTTTATCATTCCCCTGCTGGGAGCCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR GCA 90 bp CCAAAGGCTCCCAGCAGGGGAATGATAAACACACCGCGTCTTAGGTTATTTCCTGCCTTCCTTTACTGTTaGCGTGGAGCTGAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: PKAPSRGMINTPRLRLFPAFLYC*RGAEQR
Trigger: TCTCTGCTCAGCTCCACGGCAACAGTAAAGGAAGGC...AGGAAATAACCTAAGACGCGGTGTGTTTATCATTCCCCTGCTGGGAGCCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR CCA 90 bp GTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGGATATGAATCCAGATaGTCCCAGAAAGAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: VLVTLSIWNKGLGQSRGQGYESR*SQKERR
Trigger: TCTTCTTTCTTTCTGGGACCATCTGGATTCATATCC...CTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp AATGAGGACACCTCCACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTACATTTGCCAGGACCTaGAGTGGAATGACAATCATG +
Preference number: 4 (lower is better)
Translates to: NEDTSTETLPSREVSSHLTFART*SGMTIM
Trigger: CATGATTGTCATTCCACTCCAGGTCCTGGCAAATGT...AAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CCCATTACGACTGTGGAGTACAATGCAGTAAAGGAGACGATGCTGCGACCCGGCACATTTGCCAGGACCTaGAGTGGAATGACAATCATG +
Preference number: 4 (lower is better)
Translates to: PITTVEYNAVKETMLRPGTFART*SGMTIM
Trigger: CATGATTGTCATTCCACTCCAGGTCCTGGCAAATGT...GCCGGGTCGCAGCATCGTCTCCTTTACTGCATTGTACTCCACAGTCGTAATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR CCA 90 bp TGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTTTTGAACCACTTCCACTGGAATaGAACAGCGAGTTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: WAVREWMSRQRHRIMLFEPLPLE*NSEFEE
Trigger: CTCCTCAAACTCGCTGTTCCATTCCAGTGGAAGTGG...TTCAAAAAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp CTGCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGTCACATACATACTCTTaGACTATGGGGACCAAGTCT +
Preference number: 4 (lower is better)
Translates to: LLSWSLSASGIRVWGKAESHTYS*TMGTKS
Trigger: AGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGA...CTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTTGTTCATTCAAGCTCTaGAAGTGTGGAAGGGAACTT +
Preference number: 4 (lower is better)
Translates to: LLWAVREWMSRQRHRIMLCSFKL*KCGREL
Trigger: AAGTTCCCTTCCACACTTCCAGAGCTTGAATGAACA...AAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTCAACCATGTTCTGAATaGAGACTTTTTCAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: LLWAVREWMSRQRHRIMLQPCSE*RLFQVP
Trigger: GGGAACCTGAAAAAGTCTCCATTCAGAACATGGTTG...AAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CATGCTCACTTTCTTCACATACATACTCTTGGACTATGGGGACCAAGTCTGTTGCTGAACACCCAACGCTaGCGTTCCCGTGCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: HAHFLHIHTLGLWGPSLLLNTQR*RSRASL
Trigger: CAGACTGGCACGGGAACGCCAGCGTTGGGTGTTCAG...CAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGAGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTGTTACAATACAGACATaGCCAGATGACCTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: LLWAVREWMSRQRHRIMLVTIQT*PDDLLV
Trigger: AACAAGCAGGTCATCTGGCCATGTCTGTATTGTAAC...AAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TGTTTCATTCTGACCATTCTGACTCTGCCCAGAACGCCGTCCCACCTGCAGACAGAAGCCACTTGGCTTTaGACTCCATCGGTCATCTTT +
Preference number: 4 (lower is better)
Translates to: CFILTILTLPRTPSHLQTEATWL*TPSVIF
Trigger: AAAGATGACCGATGGAGTCCAAAGCCAAGTGGCTTC...TGTCTGCAGGTGGGACGGCGTTCTGGGCAGAGTCAGAATGGTCAGAATGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CCCAGAATGAGCCTATGTGGGATCAATAGGCACGGGGAGAAAGATGGCAGAGAACTTTCACACAGCTGCTaGGAGAAAACGCTGCAATGC +
Preference number: 4 (lower is better)
Translates to: PRMSLCGINRHGEKDGRELSHSC*EKTLQC
Trigger: GCATTGCAGCGTTTTCTCCCAGCAGCTGTGTGAAAG...TTCTCTGCCATCTTTCTCCCCGTGCCTATTGATCCCACATAGGCTCATTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCGCTCAGATGCATCGCTaGGCTACAGAAGTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SWGRCYILNWVLTLLSKVAQMHR*ATEVAS
Trigger: AGAGGCCACTTCTGTAGCCCAGCGATGCATCTGAGC...GACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TTCCATAAAAGAGAGTACAAAATCAGGTTTCCGCGGCACTGTGCTCCAGCCATGGCTCAGATGCATCGCTaGGCTACAGAAGTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: FHKREYKIRFPRHCAPAMAQMHR*ATEVAS
Trigger: AGAGGCCACTTCTGTAGCCCAGCGATGCATCTGAGC...CATGGCTGGAGCACAGTGCCGCGGAAACCTGATTTTGTACTCTCTTTTATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCCAAAGGCTGACCTTCTaGAGGCTCACCGCCTCATCT +
Preference number: 4 (lower is better)
Translates to: SWGRCYILNWVLTLLSKVQRLTF*RLTASS
Trigger: AGATGAGGCGGTGAGCCTCCAGAAGGTCAGCCTTTG...GACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TTCCATAAAAGAGAGTACAAAATCAGGTTTCCGCGGCACTGTGCTCCAGCCATGGCTCCGCTGACCCTGTaGTCGTTTTCCTGGAGATTG +
Preference number: 4 (lower is better)
Translates to: FHKREYKIRFPRHCAPAMAPLTL*SFSWRL
Trigger: CAATCTCCAGGAAAACGACCACAGGGTCAGCGGAGC...CATGGCTGGAGCACAGTGCCGCGGAAACCTGATTTTGTACTCTCTTTTATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CTGTCCAATAGGACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCCGCCTCGCTGAGCTTTaGAAGCGACCTTGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: LSNRTMNKLTVSLDSAILRLAEL*KRPWAP
Trigger: CGGAGCCCAAGGTCGCTTCCAAAGCTCAGCGAGGCG...GAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGTCCTATTGGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372406.5
3UTR CAA 72 bp CTTCCGAGCAGGGAGGTTTCATCACACCTTTCGTTCTaGCCAAGGAGTCTATCGCCTCATCCACAACATCTG +
Preference number: 4 (lower is better)
Translates to: LPSREVSSHLSF*PRSLSPHPQHL
Trigger: CAGATGTTGTGGATGAGGCGATAGACTCCTTGGCAAGAACGAAAGGTGTGATGAAACCTCCCTGCTCGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTTTTGAACCATGTACCCATCCTTaGAGAAGCCAAAGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: WAVREWMSRQRHRIMLFEPCTHP*RSQRCS
Trigger: TGAACACCTTTGGCTTCTTCAAGGATGGGTACATGG...TTCAAAAAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp CTTCATAATGCATCCAGGCTCCAAGATGTAACGGCTGAGGGAAAGGATGTGGGATCAGTGAGAGGCTACTaGCATTCACCACCATGTACC +
Preference number: 4 (lower is better)
Translates to: LHNASRLQDVTAEGKDVGSVRGY*HSPPCT
Trigger: GGTACATGGTGGTGAATGTCAGTAGCCTCTCACTGA...TCCCACATCCTTTCCCTCAGCCGTTACATCTTGGAGCCTGGATGCATTATGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR TCA 90 bp AATGAGGACACCTCCACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTCTAGGATTAAAAGGGTaGCAGAGACAGACTGTTTCT +
Preference number: 4 (lower is better)
Translates to: NEDTSTETLPSREVSSHLLGLKG*QRQTVS
Trigger: AGAAACAGTCTGTCTCTGTCACCCTTTTAATCCTAG...AAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCTTAGGCTCCTGGCTCTaGCCAAGGACTTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: SWGRCYILNWVLTLLSKVLGSWL*PRTFSS
Trigger: GGATGAGAAAGTCCTTGGTCAGAGCCAGGAGCCTAA...GACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp CCGTCCTTGCTACACTTCCCCACACATGGGGTCACAACTGCATACACCTTAGAGCTCTCCCATGGCCTTTaGATCCACTGTACTTCTTTT +
Preference number: 4 (lower is better)
Translates to: PSLLHFPTHGVTTAYTLELSHGL*IHCTSF
Trigger: AAAAGAAGTACAGTGGATTCAAAGGCCATGGGAGAG...CTCTAAGGTGTATGCAGTTGTGACCCCATGTGTGGGGAAGTGTAGCAAGGACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp GTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGAAAGAAAAACTGAAATaGCACTGCCCCACCATTATT +
Preference number: 4 (lower is better)
Translates to: VLVTLSIWNKGLGQSRGQKEKLK*HCPTII
Trigger: AATAATGGTGGGGCAGTGTCATTTCAGTTTTTCTTT...CTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp TCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGAAAGAAAAACTGAAATaGCACTGCCCCACCATTATT +
Preference number: 4 (lower is better)
Translates to: SWSLSASGIRVWGKAEGRKEKLK*HCPTII
Trigger: AATAATGGTGGGGCAGTGTCATTTCAGTTTTTCTTT...CCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp CCAGGGCTGGGGGCAGAACACTTGATACCAGTGAACCAAGAAGGGAAAACTCTGCTTCTTGTAAATGTCTaGTTGACCACACCACTGGGA +
Preference number: 4 (lower is better)
Translates to: PGLGAEHLIPVNQEGKTLLLVNV*LTTPLG
Trigger: TCCCAGTGGTGTGGTCAATCAGACATTTACAAGAAG...CAGAGTTTTCCCTTCTTGGTTCACTGGTATCAAGTGTTCTGCCCCCAGCCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR TCA 90 bp GGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAACAAAGCCACAAGCATaGAGGGAAGCCAGACAGTGC +
Preference number: 4 (lower is better)
Translates to: GILGQVLHPKLGFDFAFQTKPQA*REARQC
Trigger: GCACTGTCTGGCTTCCCTTCATGCTTGTGGCTTTGT...TTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp ACCTCCCACCACCTGTGCTGTGCCACAGGGCATGATCCTGACAGCGACATCACAGGGGACCAAGTCTGTTaGATTCATCTATTTAGAAAT +
Preference number: 4 (lower is better)
Translates to: TSHHLCCATGHDPDSDITGDQVC*IHLFRN
Trigger: ATTTCTAAATAGATGAATTCAACAGACTTGGTCCCC...TGTGATGTCGCTGTCAGGATCATGCCCTGTGGCACAGCACAGGTGGTGGGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TTGCCAAGGAGTCTATCGCCTCATCCACAACATCTGCTTGCGGGAGAAACAGCAATTAAGAAGCTTCCCTaGTGGGGCCATGTTTTGGTC +
Preference number: 4 (lower is better)
Translates to: LPRSLSPHPQHLLAGETAIKKLP*WGHVLV
Trigger: GACCAAAACATGGCCCCATCAGGGAAGCTTCTTAAT...TGCTGTTTCTCCCGCAAGCAGATGTTGTGGATGAGGCGATAGACTCCTTGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CCCAGAATGAGCCTATGTGGGATCAATAGGCACGGGGAGAAAGATGGCAGAGAACTTCTAAGCCAGAGGTaGGAAAACAACTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: PRMSLCGINRHGEKDGRELLSQR*ENNSQR
Trigger: TCTCTGGGAGTTGTTTTCTCACCTCTGGCTTAGAAG...TTCTCTGCCATCTTTCTCCCCGTGCCTATTGATCCCACATAGGCTCATTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TTTTTGTCTCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCCATTTACCTTTCTCCTaGAGATGGGAAGACACACGG +
Preference number: 4 (lower is better)
Translates to: FLSPKQAMALSPPFFLSPHLPFS*RWEDTR
Trigger: CCGTGTGTCTTCCCATCTTCAGGAGAAAGGTAAATG...GGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGAGACAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TTGCCAAGGAGTCTATCGCCTCATCCACAACATCTGCTTGCGGGAGAAACAGCACATTTACCTTTCTCCTaGAGATGGGAAGACACACGG +
Preference number: 4 (lower is better)
Translates to: LPRSLSPHPQHLLAGETAHLPFS*RWEDTR
Trigger: CCGTGTGTCTTCCCATCTTCAGGAGAAAGGTAAATG...TGCTGTTTCTCCCGCAAGCAGATGTTGTGGATGAGGCGATAGACTCCTTGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp GCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGATCATCAATCTGACTTaGAGCCTTTTACCAGTTACA +
Preference number: 4 (lower is better)
Translates to: AVLVTLSIWNKGLGQSRGIINLT*SLLPVT
Trigger: TGTAACTGGTAAAAGGCTTCAAGTCAGATTGATGAT...CCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp GGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATAGTTATCATCAATCTGACTTaGAGCCTTTTACCAGTTACA +
Preference number: 4 (lower is better)
Translates to: GTVLQPCALVSLSVVPIVIINLT*SLLPVT
Trigger: TGTAACTGGTAAAAGGCTTCAAGTCAGATTGATGAT...AACTATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp ACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCAGGGTCGGCTCTTGGCTTGTCAGCTGGTaGAGCCACTTGGCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: TMNKLTVSLDSAILRVGSWLVSW*SHLALD
Trigger: GTCCAAAGCCAAGTGGCTTCACCAGCTGACAAGCCA...AGAGCCGACCCTGAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCACCAGCGGATTTACAGATCAATaGCTGTTCCTATTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: HFLKHQTDTSHPPSPSTSGFTDQ*LFLLSK
Trigger: CTTGGACAATAGGAACAGTCATTGATCTGTAAATCC...GCTGGTGGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp AGTAGACATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCGAGCATCTTTTACACTaGAGCAAGCATCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: SRHFLKHQTDTSHPPSPSEHLLH*SKHLLT
Trigger: TGTGAGGAGATGCTTGCTTCAGTGTAAAAGATGCTC...GGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATGTCTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGTCTGAAGTGGTTTCTTaGAAGAAAACTCAACTGACT +
Preference number: 4 (lower is better)
Translates to: SWSLSASGIRVWGKAEGRSEVVS*KKTQLT
Trigger: AGTCAGTTGAGTTTTCTTTCAAGAAACCACTTCAGA...CCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCAGGGTCCTAAGCCATTAACTTGCTaGATCCTAAAGGGAAGAATC +
Preference number: 4 (lower is better)
Translates to: SQTGNGTLPALLLKSQGPKPLTC*ILKGRI
Trigger: GATTCTTCCCTTTAGGATTCAGCAAGTTAATGGCTT...AGGACCCTGGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TTGCCAAGGAGTCTATCGCCTCATCCACAACATCTGCTTGCGGGAGAAACAGCATCTGCAAAAGCTGTTTaGAGAGTCAAAGCCCCCATG +
Preference number: 4 (lower is better)
Translates to: LPRSLSPHPQHLLAGETASAKAV*RVKAPM
Trigger: CATGGGGGCTTTGACTCTTCAAACAGCTTTTGCAGA...TGCTGTTTCTCCCGCAAGCAGATGTTGTGGATGAGGCGATAGACTCCTTGGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp AGTAGACATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCATGTCTGACTTCTTTTaGGGTCACACGACTAGGCAA +
Preference number: 4 (lower is better)
Translates to: SRHFLKHQTDTSHPPSPSMSDFF*GHTTRQ
Trigger: TTGCCTAGTCGTGTGACCTCAAAAGAAGTCAGACAT...GGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATGTCTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TCAGAAAGGATGTGCTTAATGAAAGCCCAGCCAGTGCCAATGAGTGCAATGGTGCCAAGATGTAACGGCTaGGGGAAAGGATGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SERMCLMKAQPVPMSAMVPRCNG*GKGCGK
Trigger: CTTCCCACATCCTTTCCCTCAGCCGTTACATCTTGG...CACCATTGCACTCATTGGCACTGGCTGGGCTTTCATTAAGCACATCCTTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR TCA 90 bp AATAGAGAGTCCTTCCACAAGCCATATTCAGTCGTGCCCTCCTCGGTGGACTCTCTAAGTTCTTGCCACTaGGTTCTTGAAAGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: NRESFHKPYSVVPSSVDSLSSCH*VLESRL
Trigger: GAGCCTGCTTTCAAGAACTCAGTGGCAAGAACTTAG...AGAGTCCACCGAGGAGGGCACGACTGAATATGGCTTGTGGAAGGACTCTCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR GCA 90 bp TCATTAGCAGACTTAGAGATGACTCAGAAGATTCCATTTTCAGACGTAAGCGCCGGCTCGGCCAGCAACTaGAGCAAACCCAGCATTGGG +
Preference number: 4 (lower is better)
Translates to: SLADLEMTQKIPFSDVSAGSASN*SKPSIG
Trigger: CCCAATGCTGGGTTTGCTGCAGTTGCTGGCCGAGCC...GGCGCTTACGTCTGAAAATGGAATCTTCTGAGTCATCTCTAAGTCTGCTAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR GCA 90 bp CTGTCCAATAGGACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCGGCTCGGCCAGCAACTaGAGCAAACCCAGCATTGGG +
Preference number: 4 (lower is better)
Translates to: LSNRTMNKLTVSLDSAILGSASN*SKPSIG
Trigger: CCCAATGCTGGGTTTGCTGCAGTTGCTGGCCGAGCC...GAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGTCCTATTGGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp GGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGCCATATTCAGTCGTaGCCTCCTCGGTGGACTCTA +
Preference number: 4 (lower is better)
Translates to: GILGQVLHPKLGFDFAFQSHIQS*PPRWTL
Trigger: TAGAGTCCACCGAGGAGGGCACGACTGAATATGGCT...TTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp CTGTCCAATAGGACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCAGGGAAGCCAGACAGTaGTGCTCTGGGCTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: LSNRTMNKLTVSLDSAILREARQ*CSGLSG
Trigger: CCCTGACAGCCCAGAGCAGCACTGTCTGGCTTCCCT...GAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGTCCTATTGGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp CCGTCCTTGCTACACTTCCCCACACATGGGGTCACAACTGCATACACCTTAGAGGATGGCGAATCAAAGTaGAGAAAAAGAACACCCGCT +
Preference number: 4 (lower is better)
Translates to: PSLLHFPTHGVTTAYTLEDGESK*RKRTPA
Trigger: AGCGGGTGTTCTTTTTCTGCACTTTGATTCGCCATC...CTCTAAGGTGTATGCAGTTGTGACCCCATGTGTGGGGAAGTGTAGCAAGGACGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TTGCCAAGGAGTCTATCGCCTCATCCACAACATCTGCTTGCGGGAGAAACAGCAGGGAAGACACACGGATaGTTGCCTAAAATATCTGCC +
Preference number: 4 (lower is better)
Translates to: LPRSLSPHPQHLLAGETAGKTHG*LPKISA
Trigger: GGCAGATATTTTAGGCAAGCATCCGTGTGTCTTCCC...TGCTGTTTCTCCCGCAAGCAGATGTTGTGGATGAGGCGATAGACTCCTTGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTAGTGAACACTTAGGGTaGATTTACCTTTCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: LLWAVREWMSRQRHRIMLSEHLG*IYLSPE
Trigger: TTCAGGAGAAAGGTAAATGCACCCTAAGTGTTCACT...AAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CAGGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCCCTGGCTTCCTCGCTTaGAAAACCCAGCATGTGAAA +
Preference number: 4 (lower is better)
Translates to: QESWGRCYILNWVLTLLSPGFLA*KTQHVK
Trigger: TTTCACATGCTGGGTTTTGCAAGCGAGGAAGCCAGG...GGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTGAAACATGGATATTTTaGGTAGGCAGAAACAGTGAG +
Preference number: 4 (lower is better)
Translates to: LLWAVREWMSRQRHRIMLETWIF*VGRNSE
Trigger: CTCACTGTTTCTGCCTACGCAAAATATCCATGTTTC...AAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTTTTGAACATCTTTCACACAGCTaGTGGGAGAAAACGCTGCAA +
Preference number: 4 (lower is better)
Translates to: WAVREWMSRQRHRIMLFEHLSHS*WEKTLQ
Trigger: TTGCAGCGTTTTCTCCCAGCAGCTGTGTGAAAGATG...TTCAAAAAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TCACTTTCTTCACATACATACTCTTGGACTATGGGGACCAAGTCTGTTGAATTCGAACGCCGTCCCACCTaGAGACACCCTGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: SLSSHTYSWTMGTKSVEFERRPT*RHPAAR
Trigger: TCTGGCAGCAGGGTGTCTGCAGGTGGGACGGCGTTC...GAATTCAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TTTTTGTCTCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCACCGCCTCATCTGGCTaGTTCCTCCAAAATCCAAAA +
Preference number: 4 (lower is better)
Translates to: FLSPKQAMALSPPFFLSPTASSG*FLQNPK
Trigger: TTTTGGATTTTGGAGGAAGCAGCCAGATGAGGCGGT...GGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGAGACAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp GACAGTGCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATATGCAATTTACGATCTaGAAAAGCTGTTTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: DSAALGCQGVDVQATPQDMQFTI*KSCLKS
Trigger: ACTCTTCAAACAGCTTTTGCAGATCGTAAATTGCAT...ATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGCACTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp GCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGACACGACTAGGCAAATaGAATTTACGATCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: AVLVTLSIWNKGLGQSRGTRLGK*NLRSAK
Trigger: TTTTGCAGATCGTAAATTGCATTTGCCTAGTCGTGT...CCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp GGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATAGTTACACGACTAGGCAAATaGAATTTACGATCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: GTVLQPCALVSLSVVPIVTRLGK*NLRSAK
Trigger: TTTTGCAGATCGTAAATTGCATTTGCCTAGTCGTGT...AACTATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp GACTCAGAAGATTCCATTTTCAGACGTAAGCGCCTGATGGCGGGCCTGACAGAACAACCAACAGACACTTaGTCAGATCCTGCCACTTCT +
Preference number: 4 (lower is better)
Translates to: DSEDSIFRRKRLMAGLTEQPTDT*SDPATS
Trigger: AGAAGTGGCAGGATCTGAGCAAGTGTCTGTTGGTTG...TTCTGTCAGGCCCGCCATCAGGCGCTTACGTCTGAAAATGGAATCTTCTGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR GCA 90 bp GAGTCCTTCCACAAGCCATATTCAGTCGTGCCCTCCTCGGTGGACTCTATGATGGACTGTGGAGTACAATaGAGTAAAGGAGACGATGCT +
Preference number: 4 (lower is better)
Translates to: ESFHKPYSVVPSSVDSMMDCGVQ*SKGDDA
Trigger: AGCATCGTCTCCTTTACTGCATTGTACTCCACAGTC...CATCATAGAGTCCACCGAGGAGGGCACGACTGAATATGGCTTGTGGAAGGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR CCA 90 bp TGTTTCATTCTGACCATTCTGACTCTGCCCAGAACGCCGTCCCACCTGCAGACATGCCAGGACCTGGAGTaGAATGACAATCATGAAGAT +
Preference number: 4 (lower is better)
Translates to: CFILTILTLPRTPSHLQTCQDLE*NDNHED
Trigger: ATCTTCATGATTGTCATTCCACTCCAGGTCCTGGCA...TGTCTGCAGGTGGGACGGCGTTCTGGGCAGAGTCAGAATGGTCAGAATGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CCGTCCTTGCTACACTTCCCCACACATGGGGTCACAACTGCATACACCTTAGAGACATTTGCCAGGACCTaGAGTGGAATGACAATCATG +
Preference number: 4 (lower is better)
Translates to: PSLLHFPTHGVTTAYTLETFART*SGMTIM
Trigger: CATGATTGTCATTCCACTCCAGGTCCTGGCAAATGT...CTCTAAGGTGTATGCAGTTGTGACCCCATGTGTGGGGAAGTGTAGCAAGGACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp CATGCTCACTTTCTTCACATACATACTCTTGGACTATGGGGACCAAGTCTGTTGTCTGGAATAAGGGTCTaGGGCAAAGCCGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: HAHFLHIHTLGLWGPSLLSGIRV*GKAEGR
Trigger: CCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGA...CAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGAGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTTCGTTCTTGCCAAGGAAGATAAGATAGCATaGGACAGGGAGAACAACCAT +
Preference number: 4 (lower is better)
Translates to: HGDPSEQGGFITPFVLAKEDKIA*DRENNH
Trigger: ATGGTTGTTCTCCCTGTCCCATGCTATCTTATCTTC...CTTGGCAAGAACGAAAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp AAGTATTTGCTTAAATACTACCTATTCTGCCCCCAGCTGCTCCTTGAGGAAAACAGAGGTGAGCAGCTGTaGCCTGGGAAGGCGCTTGCT +
Preference number: 4 (lower is better)
Translates to: KYLLKYYLFCPQLLLEENRGEQL*PGKALA
Trigger: AGCAAGCGCCTTCCCAGGCCACAGCTGCTCACCTCT...GTTTTCCTCAAGGAGCAGCTGGGGGCAGAATAGGTAGTATTTAAGCAAATACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTTCGTTCTTGCCAAGGTTACAATACAGACATaGCCAGATGACCTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: HGDPSEQGGFITPFVLAKVTIQT*PDDLLV
Trigger: AACAAGCAGGTCATCTGGCCATGTCTGTATTGTAAC...CTTGGCAAGAACGAAAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp GAGGGCTTTGGTAGTCACAGATTGAGACACATTTCTGCGAAAACTGGTATTATGCAGCGGGGTGAAGTGTaGAGTGTGGAAGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: EGFGSHRLRHISAKTGIMQRGEV*SVEAGV
Trigger: CACCCCTGCTTCCACACTCCACACTTCACCCCGCTG...CATAATACCAGTTTTCGCAGAAATGTGTCTCAATCTGTGACTACCAAAGCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CAGGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCCACCCTAGGGAAAACTaGAGTGAAGAGCGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: QESWGRCYILNWVLTLLSHPREN*SEERVF
Trigger: AAAGACCCGCTCTTCACTCCAGTTTTCCCTAGGGTG...GGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CATGCTCACTTTCTTCACATACATACTCTTGGACTATGGGGACCAAGTCTGTTGGGCCTCTGGGGAATCTaGAGTATGTTCAGCCTGCCG +
Preference number: 4 (lower is better)
Translates to: HAHFLHIHTLGLWGPSLLGLWGI*SMFSLP
Trigger: CGGCAGGCTGAACATACTCCAGATTCCCCAGAGGCC...CAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGAGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp GAACAACCATGTTCTGAATGGAGACTTTTTCAGGTTCCCAAACTTGGGACAGTGGATGTGTGGGGCCCATaGCCTGGCAGTGAACCATCT +
Preference number: 4 (lower is better)
Translates to: EQPCSEWRLFQVPKLGTVDVWGP*PGSEPS
Trigger: AGATGGTTCACTGCCAGGCCATGGGCCCCACACATC...CACTGTCCCAAGTTTGGGAACCTGAAAAAGTCTCCATTCAGAACATGGTTGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR CAA 72 bp CATCTGCAATTCCAACAGGCATCGCTATGCTCTTCCTaGGTCTGTAAGGACTGGATGCCTGGAGTAGACTGT +
Preference number: 4 (lower is better)
Translates to: HLQFQQASLCSS*VCKDWMPGVDC
Trigger: ACAGTCTACTCCAGGCATCCAGTCCTTACAGACCAAGGAAGAGCATAGCGATGCCTGTTGGAATTGCAGATG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CCGTCCTTGCTACACTTCCCCACACATGGGGTCACAACTGCATACACCTTAGAGCCAAAGGTGTTCAGATaGACTTTATGCCTCACATCA +
Preference number: 4 (lower is better)
Translates to: PSLLHFPTHGVTTAYTLEPKVFR*TLCLTS
Trigger: TGATGTGAGGCATAAAGTTCATCTGAACACCTTTGG...CTCTAAGGTGTATGCAGTTGTGACCCCATGTGTGGGGAAGTGTAGCAAGGACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp TGTTTCATTCTGACCATTCTGACTCTGCCCAGAACGCCGTCCCACCTGCAGACACTAGGATTAAAAGGGTaGCAGAGACAGACTGTTTCT +
Preference number: 4 (lower is better)
Translates to: CFILTILTLPRTPSHLQTLGLKG*QRQTVS
Trigger: AGAAACAGTCTGTCTCTGTCACCCTTTTAATCCTAG...TGTCTGCAGGTGGGACGGCGTTCTGGGCAGAGTCAGAATGGTCAGAATGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TTTTTGTCTCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCCTCTCCCATGGCCTTTaGATCCACTGTACTTCTTTT +
Preference number: 4 (lower is better)
Translates to: FLSPKQAMALSPPFFLSPLSHGL*IHCTSF
Trigger: AAAAGAAGTACAGTGGATTCAAAGGCCATGGGAGAG...GGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGAGACAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp AATGAGGACACCTCCACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTATGTTAAAGAAAAACTaGAATGACACTGCCCCACCA +
Preference number: 4 (lower is better)
Translates to: NEDTSTETLPSREVSSHLMLKKN*NDTAPP
Trigger: TGGTGGGGCAGTGTCATTTCAGTTTTTCTTTAACAT...AAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CAGGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAGGAATTTCTCCTGCTaGGAGGTAGCTGTCAGGATT +
Preference number: 4 (lower is better)
Translates to: QESWGRCYILNWVLTLLSRNFSC*EVAVRI
Trigger: AATCCTGACAGCTACCTCTCAGCAGGAGAAATTCCT...GGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp ACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCAGGGTCGGCTCTACAAAGCCACAAGCATaGAGGGAAGCCAGACAGTGC +
Preference number: 4 (lower is better)
Translates to: TMNKLTVSLDSAILRVGSTKPQA*REARQC
Trigger: GCACTGTCTGGCTTCCCTTCATGCTTGTGGCTTTGT...AGAGCCGACCCTGAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp GCGATGAGGTCATCACGCAGGAGGAAATCTCACCCACACGAGGTGGACTTACAGTTTCCCCCAAAATTCTaGTCAAACACAACAAAGCCA +
Preference number: 4 (lower is better)
Translates to: AMRSSRRRKSHPHEVDLQFPPKF*SNTTKP
Trigger: TGGCTTTGTTGTGTTTGATCAGAATTTTGGGGGAAA...CTGTAAGTCCACCTCGTGTGGGTGAGATTTCCTCCTGCGTGATGACCTCATCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TGTTTCATTCTGACCATTCTGACTCTGCCCAGAACGCCGTCCCACCTGCAGACATCACAATGTACCTTCTaGGCTTGTCCTACTATTCAG +
Preference number: 4 (lower is better)
Translates to: CFILTILTLPRTPSHLQTSQCTF*ACPTIQ
Trigger: CTGAATAGTAGGACAAGCTCAGAAGGTACATTGTGA...TGTCTGCAGGTGGGACGGCGTTCTGGGCAGAGTCAGAATGGTCAGAATGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CACTTGGCTTTGGACTCCATCGGTCATCTTTACGCAAGAGCAGAGATGAACGGTATTAAGAAGCTTCCCTaGTGGGGCCATGTTTTGGTC +
Preference number: 4 (lower is better)
Translates to: HLALDSIGHLYARAEMNGIKKLP*WGHVLV
Trigger: GACCAAAACATGGCCCCATCAGGGAAGCTTCTTAAT...ACCGTTCATCTCTGCTCTTGCGTAAAGATGACCGATGGAGTCCAAAGCCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CACTTGGCTTTGGACTCCATCGGTCATCTTTACGCAAGAGCAGAGATGAACGGTCTTCTAAGCCAGAGGTaGGAAAACAACTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: HLALDSIGHLYARAEMNGLLSQR*ENNSQR
Trigger: TCTCTGGGAGTTGTTTTCTCACCTCTGGCTTAGAAG...ACCGTTCATCTCTGCTCTTGCGTAAAGATGACCGATGGAGTCCAAAGCCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp GAACAACCATGTTCTGAATGGAGACTTTTTCAGGTTCCCAAACTTGGGACAGTGACCCAGCATGTGAAATaGGGACACCTCCACGGAGAC +
Preference number: 4 (lower is better)
Translates to: EQPCSEWRLFQVPKLGTVTQHVK*GHLHGD
Trigger: GTCTCCGTGGAGGTGTCCTCATTTCACATGCTGGGT...CACTGTCCCAAGTTTGGGAACCTGAAAAAGTCTCCATTCAGAACATGGTTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CATGCTCACTTTCTTCACATACATACTCTTGGACTATGGGGACCAAGTCTGTTGTGGCTTGTCAGCTGGTaGAGCCACTTGGCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: HAHFLHIHTLGLWGPSLLWLVSW*SHLALD
Trigger: GTCCAAAGCCAAGTGGCTTCACCAGCTGACAAGCCA...CAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGAGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CCCAGAATGAGCCTATGTGGGATCAATAGGCACGGGGAGAAAGATGGCAGAGAAGAGCATCTTTTACACTaGAGCAAGCATCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: PRMSLCGINRHGEKDGREEHLLH*SKHLLT
Trigger: TGTGAGGAGATGCTTGCTTCAGTGTAAAAGATGCTC...TTCTCTGCCATCTTTCTCCCCGTGCCTATTGATCCCACATAGGCTCATTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CATGCTCACTTTCTTCACATACATACTCTTGGACTATGGGGACCAAGTCTGTTGAGAAAAGCAGCGGGGTaGAGTGTGGAGTGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: HAHFLHIHTLGLWGPSLLRKAAG*SVECGS
Trigger: GCTTCCACACTCCACACTTCACCCCGCTGCTTTTCT...CAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGAGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TCACTTTCTTCACATACATACTCTTGGACTATGGGGACCAAGTCTGTTGAATTCACGTGCTCCAAAGGCTaGCCTTCTGGAGGCTCACCG +
Preference number: 4 (lower is better)
Translates to: SLSSHTYSWTMGTKSVEFTCSKG*PSGGSP
Trigger: CGGTGAGCCTCCAGAAGGTCAGCCTTTGGAGCACGT...GAATTCAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CCAAAGGCTCCCAGCAGGGGAATGATAAACACACCGCGTCTTAGGTTATTTCCTTTGCCACTGAGTTCTTaGAAGCAGGCTCCAATGATG +
Preference number: 4 (lower is better)
Translates to: PKAPSRGMINTPRLRLFPLPLSS*KQAPMM
Trigger: CATCATTGGAGCCTGCTTTCAAGAACTCAGTGGCAA...AGGAAATAACCTAAGACGCGGTGTGTTTATCATTCCCCTGCTGGGAGCCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR GCA 90 bp AATGAGGACACCTCCACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTTTATCAGAAAGGATGTaGTTAATGAAAGCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: NEDTSTETLPSREVSSHLLSERM*LMKAQP
Trigger: TGGCTGGGCTTTCATTAAGCACATCCTTTCTGATAA...AAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp GAACAACCATGTTCTGAATGGAGACTTTTTCAGGTTCCCAAACTTGGGACAGTGTCCACCAGCCGTCCTTaGTACACTTCCCCACACATG +
Preference number: 4 (lower is better)
Translates to: EQPCSEWRLFQVPKLGTVSTSRP*YTSPHM
Trigger: CATGTGTGGGGAAGTGTAGCAAGGACGGCTGGTGGA...CACTGTCCCAAGTTTGGGAACCTGAAAAAGTCTCCATTCAGAACATGGTTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CTGAAAACTCCTTCTGCATCCCAATCTCTAACCAGGAAAGCAAATGCTATTTACAGGGAAGCCAGACAGTaGTGCTCTGGGCTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: LKTPSASQSLTRKANAIYREARQ*CSGLSG
Trigger: CCCTGACAGCCCAGAGCAGCACTGTCTGGCTTCCCT...GTAAATAGCATTTGCTTTCCTGGTTAGAGATTGGGATGCAGAAGGAGTTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCAGGGTCCTTTCTGTGAAGTATTTTaGCATCCTAAAATCCCTGAG +
Preference number: 4 (lower is better)
Translates to: SQTGNGTLPALLLKSQGPFCEVF*HPKIPE
Trigger: CTCAGGGATTTTAGGATGGCAAAATACTTCACAGAA...AGGACCCTGGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CTGAAAACTCCTTCTGCATCCCAATCTCTAACCAGGAAAGCAAATGCTATTTACGCCTGGGAAGGCGCTTaGTCTTCCTCCACATCAGCC +
Preference number: 4 (lower is better)
Translates to: LKTPSASQSLTRKANAIYAWEGA*SSSTSA
Trigger: GGCTGATGTGGAGGAAGAGCAAGCGCCTTCCCAGGC...GTAAATAGCATTTGCTTTCCTGGTTAGAGATTGGGATGCAGAAGGAGTTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp GGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATAGTTCTGGTATTATGTTTCTaGACAGGAAAACAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: GTVLQPCALVSLSVVPIVLVLCF*TGKQSV
Trigger: AACACTTTGTTTTCCTGTGCAGAAACATAATACCAG...AACTATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CAGGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCGCATCTCCTCACAAGTaGCTCCTACAAGTCACTAGA +
Preference number: 4 (lower is better)
Translates to: QESWGRCYILNWVLTLLSASPHK*LLQVTR
Trigger: TCTAGTGACTTGTAGGAGGCACTTGTGAGGAGATGC...GGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CTGAAAACTCCTTCTGCATCCCAATCTCTAACCAGGAAAGCAAATGCTATTTACACTTACAGGGCTGTGTaGTGCCTGGGCAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: LKTPSASQSLTRKANAIYTYRAV*CLGRLD
Trigger: GTCCAGCCTGCCCAGGCAGCACACAGCCCTGTAAGT...GTAAATAGCATTTGCTTTCCTGGTTAGAGATTGGGATGCAGAAGGAGTTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCGAGAAAACGCTGCAATaGACCAAAGCCTTTAGCCGG +
Preference number: 4 (lower is better)
Translates to: SWGRCYILNWVLTLLSKVEKTLQ*TKAFSR
Trigger: CCGGCTAAAGGCTTTGGTGCATTGCAGCGTTTTCTC...GACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTTTTGAAGTCAACTCAGGTAGATaGCTTTTAAAAACGCCCTGC +
Preference number: 4 (lower is better)
Translates to: WAVREWMSRQRHRIMLFEVNSGR*LLKTPC
Trigger: GCAGGGCGTTTTTAAAAGGCATCTACCTGAGTTGAC...TTCAAAAAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CTGTCCAATAGGACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCCACCTGCAGACACCCTaGTGCCAGAACTCCAACAGG +
Preference number: 4 (lower is better)
Translates to: LSNRTMNKLTVSLDSAILHLQTP*CQNSNR
Trigger: CCTGTTGGAGTTCTGGCAGCAGGGTGTCTGCAGGTG...GAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGTCCTATTGGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCAGGGTCCTACACGACTAGGCAAATaGAATTTACGATCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: SQTGNGTLPALLLKSQGPTRLGK*NLRSAK
Trigger: TTTTGCAGATCGTAAATTGCATTTGCCTAGTCGTGT...AGGACCCTGGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CTTCATAATGCATCCAGGCTCCAAGATGTAACGGCTGAGGGAAAGGATGTGGGAAGGTGTTTCTTCCTCTaGATGGGGAGATGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: LHNASRLQDVTAEGKDVGRCFFL*MGRCCL
Trigger: CAAACAGCATCTCCCCATGCAGAGGAAGAAACACCT...TCCCACATCCTTTCCCTCAGCCGTTACATCTTGGAGCCTGGATGCATTATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR GCA 90 bp GGCAAAGGGGTCAGGGCTAAGGAAGAGGGAAGAAAGATTTCTTACACGGACTCCAGGTCAAAGTCATTGTaGTGTGAAAAGCCACGCAGT +
Preference number: 4 (lower is better)
Translates to: GKGVRAKEEGRKISYTDSRSKSL*CEKPRS
Trigger: ACTGCGTGGCTTTTCACAGCACAATGACTTTGACCT...GGAGTCCGTGTAAGAAATCTTTCTTCCCTCTTCCTTAGCCCTGACCCCTTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR CCA 90 bp TCATTGAGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTCAGCAAACCCAGCATTaGGAGCAGCCGGAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: SLSFCEVFCHPKIPESETQQTQH*EQPEAR
Trigger: GCGGGCCTCCGGCTGCTCCCAATGCTGGGTTTGCTG...AGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACTCAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TTGCCAAGGAGTCTATCGCCTCATCCACAACATCTGCTTGCGGGAGAAACAGCAATGATCTTTGGTAACTaGGTACCAGCTTCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: LPRSLSPHPQHLLAGETAMIFGN*VPASGG
Trigger: TCCACCAGAAGCTGGTACCCAGTTACCAAAGATCAT...TGCTGTTTCTCCCGCAAGCAGATGTTGTGGATGAGGCGATAGACTCCTTGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp AGTAGACATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCGCCGCCATCAGCCAGTaGATTTTAAATACATCATTC +
Preference number: 4 (lower is better)
Translates to: SRHFLKHQTDTSHPPSPSAAISQ*ILNTSF
Trigger: GAATGATGTATTTAAAATCCACTGGCTGATGGCGGC...GGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATGTCTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp TTCCATAAAAGAGAGTACAAAATCAGGTTTCCGCGGCACTGTGCTCCAGCCATGCAAAGAAGACCAGTGTaGCCGTTTCATCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: FHKREYKIRFPRHCAPAMQRRPV*PFHPGA
Trigger: AGCTCCTGGATGAAACGGCCACACTGGTCTTCTTTG...CATGGCTGGAGCACAGTGCCGCGGAAACCTGATTTTGTACTCTCTTTTATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp TCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCAGGGTCCTCATTTCTGCGAAAACTaGTATTATGTTTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: SQTGNGTLPALLLKSQGPHFCEN*YYVSAQ
Trigger: CTGTGCAGAAACATAATACCAGTTTTCGCAGAAATG...AGGACCCTGGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp AAGTATTTGCTTAAATACTACCTATTCTGCCCCCAGCTGCTCCTTGAGGAAAACTGTCCACTGCTGCTCTaGAAGGGTCAGGACCAGCAC +
Preference number: 4 (lower is better)
Translates to: KYLLKYYLFCPQLLLEENCPLLL*KGQDQH
Trigger: GTGCTGGTCCTGACCCTTCCAGAGCAGCAGTGGACA...GTTTTCCTCAAGGAGCAGCTGGGGGCAGAATAGGTAGTATTTAAGCAAATACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TTGCCAAGGAGTCTATCGCCTCATCCACAACATCTGCTTGCGGGAGAAACAGCACTGCTTTCCCAATCTTaGGCTGGGGTTTTGACTTTT +
Preference number: 4 (lower is better)
Translates to: LPRSLSPHPQHLLAGETALLSQS*AGVLTF
Trigger: AAAAGTCAAAACCCCAGCCCAAGATTGGGAAAGCAG...TGCTGTTTCTCCCGCAAGCAGATGTTGTGGATGAGGCGATAGACTCCTTGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTTCGTTCTTGCCAAGTTCTCAGAGGAAACATaGATATTTTGCGTAGGCAGA +
Preference number: 4 (lower is better)
Translates to: HGDPSEQGGFITPFVLAKFSEET*IFCVGR
Trigger: TCTGCCTACGCAAAATATCCATGTTTCCTCTGAGAA...CTTGGCAAGAACGAAAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCAGGGCGGGGAAACCCTaGATATTTCACTCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: SWGRCYILNWVLTLLSKVRAGKP*IFHSEV
Trigger: CACTTCAGAGTGAAATATCCAGGGTTTCCCCGCCCT...GACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CATGCTCACTTTCTTCACATACATACTCTTGGACTATGGGGACCAAGTCTGTTGCAAAGGCTGACCTTCTaGAGGCTCACCGCCTCATCT +
Preference number: 4 (lower is better)
Translates to: HAHFLHIHTLGLWGPSLLQRLTF*RLTASS
Trigger: AGATGAGGCGGTGAGCCTCCAGAAGGTCAGCCTTTG...CAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGAGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR CAA 72 bp GCAAGTTCCATCTTCCCTGACAAGACCCAGCTAGGTTaGGCAGATACTGTACTTCAAACCAGATCAGACAGC +
Preference number: 4 (lower is better)
Translates to: ASSIFPDKTQLG*ADTVLQTRSDS
Trigger: GCTGTCTGATCTGGTTTGAAGTACAGTATCTGCCAAACCTAGCTGGGTCTTGTCAGGGAAGATGGAACTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR TCA 90 bp AATAGAGAGTCCTTCCACAAGCCATATTCAGTCGTGCCCTCCTCGGTGGACTCTCCAAAGGTGTTCAGATaGACTTTATGCCTCACATCA +
Preference number: 4 (lower is better)
Translates to: NRESFHKPYSVVPSSVDSPKVFR*TLCLTS
Trigger: TGATGTGAGGCATAAAGTTCATCTGAACACCTTTGG...AGAGTCCACCGAGGAGGGCACGACTGAATATGGCTTGTGGAAGGACTCTCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR TCA 90 bp CATGCTCACTTTCTTCACATACATACTCTTGGACTATGGGGACCAAGTCTGTTGCCCCCAGCTGCTCCTTaGGGAAAACTTTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: HAHFLHIHTLGLWGPSLLPPAAP*GKLSIS
Trigger: GGAAATGGAAAGTTTTCCTCAAGGAGCAGCTGGGGG...CAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGAGCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp GGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAATTAAGAAGCTTCCCTaGTGGGGCCATGTTTTGGTC +
Preference number: 4 (lower is better)
Translates to: GILGQVLHPKLGFDFAFQIKKLP*WGHVLV
Trigger: GACCAAAACATGGCCCCATCAGGGAAGCTTCTTAAT...TTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp AGTAGACATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCAAAAAGGTCCAGAAGTaGACACTTAGGGTGCATTTA +
Preference number: 4 (lower is better)
Translates to: SRHFLKHQTDTSHPPSPSKKVQK*TLRVHL
Trigger: TAAATGCACCCTAAGTGTTCACTTCTGGACCTTTTT...GGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATGTCTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TGTTTCATTCTGACCATTCTGACTCTGCCCAGAACGCCGTCCCACCTGCAGACATTGGTAGTCACAGATTaGGACACATTTCTGCGAAAA +
Preference number: 4 (lower is better)
Translates to: CFILTILTLPRTPSHLQTLVVTD*DTFLRK
Trigger: TTTTCGCAGAAATGTGTCTCAATCTGTGACTACCAA...TGTCTGCAGGTGGGACGGCGTTCTGGGCAGAGTCAGAATGGTCAGAATGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp GAGGGCTTTGGTAGTCACAGATTGAGACACATTTCTGCGAAAACTGGTATTATGACGCAAGAGCAGAGATaGACGGTGGGTCACGGCTAT +
Preference number: 4 (lower is better)
Translates to: EGFGSHRLRHISAKTGIMTQEQR*TVGHGY
Trigger: ATAGCCGTGACCCACCGTTCATCTCTGCTCTTGCGT...CATAATACCAGTTTTCGCAGAAATGTGTCTCAATCTGTGACTACCAAAGCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp GGCAAAGGGGTCAGGGCTAAGGAAGAGGGAAGAAAGATTTCTTACACGGACTCCAAAGTCATTGTGCTGTaGAAAGCCACGCAGTTATCT +
Preference number: 4 (lower is better)
Translates to: GKGVRAKEEGRKISYTDSKVIVL*KATQLS
Trigger: AGATAACTGCGTGGCTTTTCACAGCACAATGACTTT...GGAGTCCGTGTAAGAAATCTTTCTTCCCTCTTCCTTAGCCCTGACCCCTTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR TCA 90 bp CCAGGGCTGGGGGCAGAACACTTGATACCAGTGAACCAAGAAGGGAAAACTCTGCATTTTTCTAGACAATaGTGGCCCTTTCCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: PGLGAEHLIPVNQEGKTLHFSRQ*WPFPRK
Trigger: TTTTCTGGGAAAGGGCCATCATTGTCTAGAAAAATG...CAGAGTTTTCCCTTCTTGGTTCACTGGTATCAAGTGTTCTGCCCCCAGCCCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR TCA 90 bp CCAGGGCTGGGGGCAGAACACTTGATACCAGTGAACCAAGAAGGGAAAACTCTGCATCAAACACAGCATTaGCCTGGCTTATCAAATTTC +
Preference number: 4 (lower is better)
Translates to: PGLGAEHLIPVNQEGKTLHQTQH*PGLSNF
Trigger: GAAATTTGATAAGCCAGGTCAATGCTGTGTTTGATG...CAGAGTTTTCCCTTCTTGGTTCACTGGTATCAAGTGTTCTGCCCCCAGCCCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR GCA 90 bp GAGGGCTTTGGTAGTCACAGATTGAGACACATTTCTGCGAAAACTGGTATTATGAGTTTCCTTGGACAGTaGCATCCTCAGGGTCGGCTC +
Preference number: 4 (lower is better)
Translates to: EGFGSHRLRHISAKTGIMSFLGQ*HPQGRL
Trigger: GAGCCGACCCTGAGGATGGCACTGTCCAAGGAAACT...CATAATACCAGTTTTCGCAGAAATGTGTCTCAATCTGTGACTACCAAAGCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp ACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCAGGGTCGGCTCTACATGGGGTCACAACTaGATACACCTTAGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: TMNKLTVSLDSAILRVGSTWGHN*IHLRAP
Trigger: CGGAGCTCTAAGGTGTATGCAGTTGTGACCCCATGT...AGAGCCGACCCTGAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp TCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCTATTCTGCCCCCAGCTaGTCCTTGAGGAAAACTTTC +
Preference number: 4 (lower is better)
Translates to: SWGRCYILNWVLTLLSKVYSAPS*SLRKTF
Trigger: GAAAGTTTTCCTCAAGGAGCAGCTGGGGGCAGAATA...GACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp AAGTATTTGCTTAAATACTACCTATTCTGCCCCCAGCTGCTCCTTGAGGAAAACAGGTACCTGTTCCCCTaGAGGTGTGGCTCTCTGACA +
Preference number: 4 (lower is better)
Translates to: KYLLKYYLFCPQLLLEENRYLFP*RCGSLT
Trigger: TGTCAGAGAGCCACACCTGCAGGGGAACAGGTACCT...GTTTTCCTCAAGGAGCAGCTGGGGGCAGAATAGGTAGTATTTAAGCAAATACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCACCAGCCTGGTATTATGTTTCTaGACAGGAAAACAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: HFLKHQTDTSHPPSPSTSLVLCF*TGKQSV
Trigger: AACACTTTGTTTTCCTGTGCAGAAACATAATACCAG...GCTGGTGGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp GAACAACCATGTTCTGAATGGAGACTTTTTCAGGTTCCCAAACTTGGGACAGTGATCTCATCTGTCCACTaGTGCTCTGGAAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: EQPCSEWRLFQVPKLGTVISSVH*CSGRVR
Trigger: CCTGACCCTTCCAGAGCAGCAGTGGACAGATGAGAT...CACTGTCCCAAGTTTGGGAACCTGAAAAAGTCTCCATTCAGAACATGGTTGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TTTTTGTCTCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCCCCGATCTGAAATACTaGAAGGGCTTAACCATTCAA +
Preference number: 4 (lower is better)
Translates to: FLSPKQAMALSPPFFLSPPDLKY*KGLTIQ
Trigger: TTGAATGGTTAAGCCCTTGCAGTATTTCAGATCGGG...GGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGAGACAAAAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CCGTCCTTGCTACACTTCCCCACACATGGGGTCACAACTGCATACACCTTAGAGGAAACATGGATATTTTaGGTAGGCAGAAACAGTGAG +
Preference number: 4 (lower is better)
Translates to: PSLLHFPTHGVTTAYTLEETWIF*VGRNSE
Trigger: CTCACTGTTTCTGCCTACGCAAAATATCCATGTTTC...CTCTAAGGTGTATGCAGTTGTGACCCCATGTGTGGGGAAGTGTAGCAAGGACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TTCCATAAAAGAGAGTACAAAATCAGGTTTCCGCGGCACTGTGCTCCAGCCATGCAACAGGCATCGCTATaGTCTTCCTTGGTCTGTAAG +
Preference number: 4 (lower is better)
Translates to: FHKREYKIRFPRHCAPAMQQASL*SSLVCK
Trigger: CTTACAGACCAAGGAAGAGCATAGCGATGCCTGTTG...CATGGCTGGAGCACAGTGCCGCGGAAACCTGATTTTGTACTCTCTTTTATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp GAGGGCTTTGGTAGTCACAGATTGAGACACATTTCTGCGAAAACTGGTATTATGGTGTGGAAGCAGGGGTaGAGCAGTGTGCTAGATCTG +
Preference number: 4 (lower is better)
Translates to: EGFGSHRLRHISAKTGIMVWKQG*SSVLDL
Trigger: CAGATCTAGCACACTGCTGCACCCCTGCTTCCACAC...CATAATACCAGTTTTCGCAGAAATGTGTCTCAATCTGTGACTACCAAAGCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCACCTGTTTTCGTTGCACCATCTCAGTGTaGTCCCTCACACAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: CYILNWVLTLLSKVTCFRCTISV*SLTQGL
Trigger: CAGGCCCTGTGTGAGGGAGCACACTGAGATGGTGCA...ACGAAAACAGGTGACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TCACTTTCTTCACATACATACTCTTGGACTATGGGGACCAAGTCTGTTGAATTCAGCGAGGCCAAGCCATaGCCATTCACTCCTGCACCA +
Preference number: 4 (lower is better)
Translates to: SLSSHTYSWTMGTKSVEFSEAKP*PFTPAP
Trigger: TGGTGCAGGAGTGAATGGGCATGGCTTGGCCTCGCT...GAATTCAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp ACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCAGGGTCGGCTCTCGTTTTCCTGGAGATTaGGACCTAGGAAGTCGTCGA +
Preference number: 4 (lower is better)
Translates to: TMNKLTVSLDSAILRVGSRFPGD*DLGSRR
Trigger: TCGACGACTTCCTAGGTCGCAATCTCCAGGAAAACG...AGAGCCGACCCTGAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp GAGTCCTTCCACAAGCCATATTCAGTCGTGCCCTCCTCGGTGGACTCTATGATGGGATATGAATCCAGATaGTCCCAGAAAGAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: ESFHKPYSVVPSSVDSMMGYESR*SQKERR
Trigger: TCTTCTTTCTTTCTGGGACCATCTGGATTCATATCC...CATCATAGAGTCCACCGAGGAGGGCACGACTGAATATGGCTTGTGGAAGGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR CCA 90 bp CCCAGAATGAGCCTATGTGGGATCAATAGGCACGGGGAGAAAGATGGCAGAGAAGCCGCCATCAGCCAGTaGATTTTAAATACATCATTC +
Preference number: 4 (lower is better)
Translates to: PRMSLCGINRHGEKDGREAAISQ*ILNTSF
Trigger: GAATGATGTATTTAAAATCCACTGGCTGATGGCGGC...TTCTCTGCCATCTTTCTCCCCGTGCCTATTGATCCCACATAGGCTCATTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TTTTTGTCTCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCCATACTCTTGGACTATaGGGACCAAGTCTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: FLSPKQAMALSPPFFLSPHTLGL*GPSLLN
Trigger: ATTCAACAGACTTGGTCCCCATAGTCCAAGAGTATG...GGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGAGACAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CCCAGAATGAGCCTATGTGGGATCAATAGGCACGGGGAGAAAGATGGCAGAGAAGAAGATAAGATAGCATaGGACAGGGAGAACAACCAT +
Preference number: 4 (lower is better)
Translates to: PRMSLCGINRHGEKDGREEDKIA*DRENNH
Trigger: ATGGTTGTTCTCCCTGTCCCATGCTATCTTATCTTC...TTCTCTGCCATCTTTCTCCCCGTGCCTATTGATCCCACATAGGCTCATTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCAGGGTCCTACTCACAGAACAGGATaGAGAGCTTCAATAATTTTT +
Preference number: 4 (lower is better)
Translates to: SQTGNGTLPALLLKSQGPTHRTG*RASIIF
Trigger: AAAAATTATTGAAGCTCTCCATCCTGTTCTGTGAGT...AGGACCCTGGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CTGTCCAATAGGACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCGCTGGTGAAGCCACTTaGCTTTGGACTCCATCGGTC +
Preference number: 4 (lower is better)
Translates to: LSNRTMNKLTVSLDSAILAGEAT*LWTPSV
Trigger: GACCGATGGAGTCCAAAGCCAAGTGGCTTCACCAGC...GAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGTCCTATTGGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CCCAGAATGAGCCTATGTGGGATCAATAGGCACGGGGAGAAAGATGGCAGAGAAACACCCATTTTAGTGTaGAGGAAGACCAGCCTATAT +
Preference number: 4 (lower is better)
Translates to: PRMSLCGINRHGEKDGRETPILV*RKTSLY
Trigger: ATATAGGCTGGTCTTCCTCCACACTAAAATGGGTGT...TTCTCTGCCATCTTTCTCCCCGTGCCTATTGATCCCACATAGGCTCATTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp GGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAATTGGTCTGTAAGGACTaGATGCCTGGAGTAGACTGT +
Preference number: 4 (lower is better)
Translates to: GILGQVLHPKLGFDFAFQLVCKD*MPGVDC
Trigger: ACAGTCTACTCCAGGCATCCAGTCCTTACAGACCAA...TTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp AAGTATTTGCTTAAATACTACCTATTCTGCCCCCAGCTGCTCCTTGAGGAAAACCAAAGGCTGACCTTCTaGAGGCTCACCGCCTCATCT +
Preference number: 4 (lower is better)
Translates to: KYLLKYYLFCPQLLLEENQRLTF*RLTASS
Trigger: AGATGAGGCGGTGAGCCTCCAGAAGGTCAGCCTTTG...GTTTTCCTCAAGGAGCAGCTGGGGGCAGAATAGGTAGTATTTAAGCAAATACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp AAGTATTTGCTTAAATACTACCTATTCTGCCCCCAGCTGCTCCTTGAGGAAAACGCTCCGCTGACCCTGTaGTCGTTTTCCTGGAGATTG +
Preference number: 4 (lower is better)
Translates to: KYLLKYYLFCPQLLLEENAPLTL*SFSWRL
Trigger: CAATCTCCAGGAAAACGACCACAGGGTCAGCGGAGC...GTTTTCCTCAAGGAGCAGCTGGGGGCAGAATAGGTAGTATTTAAGCAAATACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp GAACAACCATGTTCTGAATGGAGACTTTTTCAGGTTCCCAAACTTGGGACAGTGTCAGTGAGAGGCTACTaGCATTCACCACCATGTACC +
Preference number: 4 (lower is better)
Translates to: EQPCSEWRLFQVPKLGTVSVRGY*HSPPCT
Trigger: GGTACATGGTGGTGAATGTCAGTAGCCTCTCACTGA...CACTGTCCCAAGTTTGGGAACCTGAAAAAGTCTCCATTCAGAACATGGTTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp AAGTATTTGCTTAAATACTACCTATTCTGCCCCCAGCTGCTCCTTGAGGAAAACGGTCTGGTTGCCTGCTaGAGCAGGGTTAACATTAGG +
Preference number: 4 (lower is better)
Translates to: KYLLKYYLFCPQLLLEENGLVAC*SRVNIR
Trigger: CCTAATGTTAACCCTGCTTCAGCAGGCAACCAGACC...GTTTTCCTCAAGGAGCAGCTGGGGGCAGAATAGGTAGTATTTAAGCAAATACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp TTGCAAAACCCAGCATGTGAAATGAGGACACCTCCACGGAGACCCTTCCGAGCAAAAGAAAAACTGAAATaGCACTGCCCCACCATTATT +
Preference number: 4 (lower is better)
Translates to: LQNPACEMRTPPRRPFRAKEKLK*HCPTII
Trigger: AATAATGGTGGGGCAGTGTCATTTCAGTTTTTCTTT...TGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATTTCACATGCTGGGTTTTGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TTCCATAAAAGAGAGTACAAAATCAGGTTTCCGCGGCACTGTGCTCCAGCCATGCGTTTTCGAAGGATATaGATCCAGATGGTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: FHKREYKIRFPRHCAPAMRFRRI*IQMVPE
Trigger: TTCTGGGACCATCTGGATTCATATCCTTCGAAAACG...CATGGCTGGAGCACAGTGCCGCGGAAACCTGATTTTGTACTCTCTTTTATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp TGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTTTTGAATTTCCCCCAAAATTCTaGTCAAACACAACAAAGCCA +
Preference number: 4 (lower is better)
Translates to: WAVREWMSRQRHRIMLFEFPPKF*SNTTKP
Trigger: TGGCTTTGTTGTGTTTGATCAGAATTTTGGGGGAAA...TTCAAAAAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp AAGTATTTGCTTAAATACTACCTATTCTGCCCCCAGCTGCTCCTTGAGGAAAACCCCCCAGCTGCTCCTTaGGGAAAACTTTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: KYLLKYYLFCPQLLLEENPPAAP*GKLSIS
Trigger: GGAAATGGAAAGTTTTCCTCAAGGAGCAGCTGGGGG...GTTTTCCTCAAGGAGCAGCTGGGGGCAGAATAGGTAGTATTTAAGCAAATACTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp TTGCAAAACCCAGCATGTGAAATGAGGACACCTCCACGGAGACCCTTCCGAGCAGGGGACCAAGTCTGTTaGATTCATCTATTTAGAAAT +
Preference number: 4 (lower is better)
Translates to: LQNPACEMRTPPRRPFRAGDQVC*IHLFRN
Trigger: ATTTCTAAATAGATGAATTCAACAGACTTGGTCCCC...TGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATTTCACATGCTGGGTTTTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CTGTCCAATAGGACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCGCAAAACCCAGCATGTaGAATGAGGACACCTCCACG +
Preference number: 4 (lower is better)
Translates to: LSNRTMNKLTVSLDSAILAKPSM*NEDTST
Trigger: CGTGGAGGTGTCCTCATTTCACATGCTGGGTTTTGC...GAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGTCCTATTGGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TCATTGAGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTCACTCGGCCATGCTGTaGGTGAGCCCAGACATACGC +
Preference number: 4 (lower is better)
Translates to: SLSFCEVFCHPKIPESETHSAML*VSPDIR
Trigger: GCGTATGTCTGGGCTCACTCACAGCATGGCCGAGTG...AGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACTCAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TGTTTCATTCTGACCATTCTGACTCTGCCCAGAACGCCGTCCCACCTGCAGACAATCATCAATCTGACTTaGAGCCTTTTACCAGTTACA +
Preference number: 4 (lower is better)
Translates to: CFILTILTLPRTPSHLQTIINLT*SLLPVT
Trigger: TGTAACTGGTAAAAGGCTTCAAGTCAGATTGATGAT...TGTCTGCAGGTGGGACGGCGTTCTGGGCAGAGTCAGAATGGTCAGAATGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp AAGTATTTGCTTAAATACTACCTATTCTGCCCCCAGCTGCTCCTTGAGGAAAACGACCAAGAAATGGGCTaGTCAAGTCCTTGGCCACTC +
Preference number: 4 (lower is better)
Translates to: KYLLKYYLFCPQLLLEENDQEMG*SSPWPL
Trigger: GAGTGGCCAAGGACTTGATCAGCCCATTTCTTGGTC...GTTTTCCTCAAGGAGCAGCTGGGGGCAGAATAGGTAGTATTTAAGCAAATACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TGCCTCCTACAAGTCACTAGAGTCATATTCAACATTACAAAATGCAGTGCTACTCAGCAGAGATGGCGATaGGGTCATCACGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: CLLQVTRVIFNITKCSATQQRWR*GHHAGG
Trigger: TCCTCCTGCGTGATGACCTCATCGCCATCTCTGCTG...AGTAGCACTGCATTTTGTAATGTTGAATATGACTCTAGTGACTTGTAGGAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp ACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCAGGGTCGGCTCTTCTGCAAAAGCTGTTTaGAGAGTCAAAGCCCCCATG +
Preference number: 4 (lower is better)
Translates to: TMNKLTVSLDSAILRVGSSAKAV*RVKAPM
Trigger: CATGGGGGCTTTGACTCTTCAAACAGCTTTTGCAGA...AGAGCCGACCCTGAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CAGGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCGATTTCACTGAGCGTTaGCTCGGAGGAAAATATCTA +
Preference number: 4 (lower is better)
Translates to: QESWGRCYILNWVLTLLSDFTER*LGGKYL
Trigger: TAGATATTTTCCTCCGAGTCAACGCTCAGTGAAATC...GGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372406.5
CDS-3UTR GCA 90 bp TGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTTTTGAATTATCAGAAAGGATGTaGTTAATGAAAGCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: WAVREWMSRQRHRIMLFELSERM*LMKAQP
Trigger: TGGCTGGGCTTTCATTAAGCACATCCTTTCTGATAA...TTCAAAAAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp AAGTATTTGCTTAAATACTACCTATTCTGCCCCCAGCTGCTCCTTGAGGAAAACAGCCATATTCAGTCGTaGCCTCCTCGGTGGACTCTA +
Preference number: 4 (lower is better)
Translates to: KYLLKYYLFCPQLLLEENSHIQS*PPRWTL
Trigger: TAGAGTCCACCGAGGAGGGCACGACTGAATATGGCT...GTTTTCCTCAAGGAGCAGCTGGGGGCAGAATAGGTAGTATTTAAGCAAATACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp TTCCATAAAAGAGAGTACAAAATCAGGTTTCCGCGGCACTGTGCTCCAGCCATGAGACACACGGATGCTTaGCTAAAATATCTGCCGAGA +
Preference number: 4 (lower is better)
Translates to: FHKREYKIRFPRHCAPAMRHTDA*LKYLPR
Trigger: TCTCGGCAGATATTTTAGGCAAGCATCCGTGTGTCT...CATGGCTGGAGCACAGTGCCGCGGAAACCTGATTTTGTACTCTCTTTTATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CATGCTCACTTTCTTCACATACATACTCTTGGACTATGGGGACCAAGTCTGTTGCACACCTTTCGTTCTTaGCAAGGAGTCTATCGCCTC +
Preference number: 4 (lower is better)
Translates to: HAHFLHIHTLGLWGPSLLHTFRS*QGVYRL
Trigger: GAGGCGATAGACTCCTTGGCAAGAACGAAAGGTGTG...CAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGAGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCACCTGTTTTCGTGTCCACACACACGCCTaGCTCTCTCTAGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: CYILNWVLTLLSKVTCFRVHTHA*LSLVPP
Trigger: TGGAGGAACTAGAGAGAGGCAGGCGTGTGTGTGGAC...ACGAAAACAGGTGACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CTGTCCAATAGGACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCCATGGCCAGATGACCTaGTTGTTAGGAAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LSNRTMNKLTVSLDSAILHGQMT*LLGRLW
Trigger: CCACAGCCTTCCTAACAAGCAGGTCATCTGGCCATG...GAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGTCCTATTGGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CAGGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCCCCGATCTGAAATACTaGAAGGGCTTAACCATTCAA +
Preference number: 4 (lower is better)
Translates to: QESWGRCYILNWVLTLLSPDLKY*KGLTIQ
Trigger: TTGAATGGTTAAGCCCTTGCAGTATTTCAGATCGGG...GGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TTTTTGTCTCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCTACCACCAATGGTTCTaGTATGTGCATCCGATATTT +
Preference number: 4 (lower is better)
Translates to: FLSPKQAMALSPPFFLSPYHQWF*YVHPIF
Trigger: AAATATCGGATGCACATAGCAGAACCATTGGTGGTA...GGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGAGACAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp ACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCAGGGTCGGCTCTGCATCTCCTCACAAGTaGCTCCTACAAGTCACTAGA +
Preference number: 4 (lower is better)
Translates to: TMNKLTVSLDSAILRVGSASPHK*LLQVTR
Trigger: TCTAGTGACTTGTAGGAGGCACTTGTGAGGAGATGC...AGAGCCGACCCTGAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp GAACAACCATGTTCTGAATGGAGACTTTTTCAGGTTCCCAAACTTGGGACAGTGAGGCCAGAATGCATCTaGAATTCCAACAGGCATCGC +
Preference number: 4 (lower is better)
Translates to: EQPCSEWRLFQVPKLGTVRPECI*NSNRHR
Trigger: GCGATGCCTGTTGGAATTGCAGATGCATTCTGGCCT...CACTGTCCCAAGTTTGGGAACCTGAAAAAGTCTCCATTCAGAACATGGTTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCCTTTTAAAAACGCCCTaGCAGAAACACCCTAGGGAA +
Preference number: 4 (lower is better)
Translates to: SWGRCYILNWVLTLLSKVLLKTP*QKHPRE
Trigger: TTCCCTAGGGTGTTTCTGGCAGGGCGTTTTTAAAAG...GACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TTCCATAAAAGAGAGTACAAAATCAGGTTTCCGCGGCACTGTGCTCCAGCCATGGTCAACTCAGGTAGATaGCTTTTAAAAACGCCCTGC +
Preference number: 4 (lower is better)
Translates to: FHKREYKIRFPRHCAPAMVNSGR*LLKTPC
Trigger: GCAGGGCGTTTTTAAAAGGCATCTACCTGAGTTGAC...CATGGCTGGAGCACAGTGCCGCGGAAACCTGATTTTGTACTCTCTTTTATGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp GAACAACCATGTTCTGAATGGAGACTTTTTCAGGTTCCCAAACTTGGGACAGTGGGAGTATGTTCAGCCTaGCGACCGATAACTACGTTC +
Preference number: 4 (lower is better)
Translates to: EQPCSEWRLFQVPKLGTVGVCSA*RPITTF
Trigger: GAACGTAGTTATCGGTCGGCAGGCTGAACATACTCC...CACTGTCCCAAGTTTGGGAACCTGAAAAAGTCTCCATTCAGAACATGGTTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CAGGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCACTGAAAACTCCTTCTaGATCCCAATCTCTAACCAG +
Preference number: 4 (lower is better)
Translates to: QESWGRCYILNWVLTLLSTENSF*IPISNQ
Trigger: CTGGTTAGAGATTGGGATGCAGAAGGAGTTTTCAGT...GGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TGTTTCATTCTGACCATTCTGACTCTGCCCAGAACGCCGTCCCACCTGCAGACACTCTTACCTCACTTCTaGAGATGTCTAGGATTAAAA +
Preference number: 4 (lower is better)
Translates to: CFILTILTLPRTPSHLQTLLPHF*RCLGLK
Trigger: TTTTAATCCTAGACATCTCCAGAAGTGAGGTAAGAG...TGTCTGCAGGTGGGACGGCGTTCTGGGCAGAGTCAGAATGGTCAGAATGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TTCCATAAAAGAGAGTACAAAATCAGGTTTCCGCGGCACTGTGCTCCAGCCATGAGGATTTCTCTCCCATaGCCTTTGAATCCACTGTAC +
Preference number: 4 (lower is better)
Translates to: FHKREYKIRFPRHCAPAMRISLP*PLNPLY
Trigger: GTACAGTGGATTCAAAGGCCATGGGAGAGAAATCCT...CATGGCTGGAGCACAGTGCCGCGGAAACCTGATTTTGTACTCTCTTTTATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp TTTTTGTCTCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCGGATATGAATCCAGATaGTCCCAGAAAGAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: FLSPKQAMALSPPFFLSPGYESR*SQKERR
Trigger: TCTTCTTTCTTTCTGGGACCATCTGGATTCATATCC...GGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGAGACAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp TTCCATAAAAGAGAGTACAAAATCAGGTTTCCGCGGCACTGTGCTCCAGCCATGTGCCAGGACCTGGAGTaGAATGACAATCATGAAGAT +
Preference number: 4 (lower is better)
Translates to: FHKREYKIRFPRHCAPAMCQDLE*NDNHED
Trigger: ATCTTCATGATTGTCATTCCACTCCAGGTCCTGGCA...CATGGCTGGAGCACAGTGCCGCGGAAACCTGATTTTGTACTCTCTTTTATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp TGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTTTTGAATGCTACATCCTAAACTaGGTTTTGACTTTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: WAVREWMSRQRHRIMLFECYILN*VLTLLS
Trigger: GGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCA...TTCAAAAAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp CTGTCCAATAGGACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCGTGGGCTCCAGCTTTTaGAAGCAACCCTACCTAGCT +
Preference number: 4 (lower is better)
Translates to: LSNRTMNKLTVSLDSAILVGSSF*KQPYLA
Trigger: AGCTAGGTAGGGTTGCTTCCAAAAGCTGGAGCCCAC...GAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGTCCTATTGGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CCGTCCTTGCTACACTTCCCCACACATGGGGTCACAACTGCATACACCTTAGAGCATTTCTGCGAAAACTaGTATTATGTTTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: PSLLHFPTHGVTTAYTLEHFCEN*YYVSAQ
Trigger: CTGTGCAGAAACATAATACCAGTTTTCGCAGAAATG...CTCTAAGGTGTATGCAGTTGTGACCCCATGTGTGGGGAAGTGTAGCAAGGACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp AAGTATTTGCTTAAATACTACCTATTCTGCCCCCAGCTGCTCCTTGAGGAAAACAGTTCCTCCACTGCCTaGCTTCCTCGCTTGCAAAAC +
Preference number: 4 (lower is better)
Translates to: KYLLKYYLFCPQLLLEENSSSTA*LPRLQN
Trigger: GTTTTGCAAGCGAGGAAGCCAGGCAGTGGAGGAACT...GTTTTCCTCAAGGAGCAGCTGGGGGCAGAATAGGTAGTATTTAAGCAAATACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TTTTTGTCTCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCTTGTTAGGAAGGCTGTaGCCATCTTTGTTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: FLSPKQAMALSPPFFLSPLLGRL*PSLFLK
Trigger: TTTCAGAAACAAAGATGGCCACAGCCTTCCTAACAA...GGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGAGACAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TTCCATAAAAGAGAGTACAAAATCAGGTTTCCGCGGCACTGTGCTCCAGCCATGCTGCTTTCCCAATCTTaGGCTGGGGTTTTGACTTTT +
Preference number: 4 (lower is better)
Translates to: FHKREYKIRFPRHCAPAMLLSQS*AGVLTF
Trigger: AAAAGTCAAAACCCCAGCCCAAGATTGGGAAAGCAG...CATGGCTGGAGCACAGTGCCGCGGAAACCTGATTTTGTACTCTCTTTTATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTTTTGAATATAAATACCACCAATaGTTCTGCTATGTGCATCCG +
Preference number: 4 (lower is better)
Translates to: WAVREWMSRQRHRIMLFEYKYHQ*FCYVHP
Trigger: CGGATGCACATAGCAGAACCATTGGTGGTATTTATA...TTCAAAAAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TGCCTCCTACAAGTCACTAGAGTCATATTCAACATTACAAAATGCAGTGCTACTCTCACCCACACGAGGTaGACTTACAGGGCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: CLLQVTRVIFNITKCSATLTHTR*TYRAVC
Trigger: GCACACAGCCCTGTAAGTCCACCTCGTGTGGGTGAG...AGTAGCACTGCATTTTGTAATGTTGAATATGACTCTAGTGACTTGTAGGAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp GAACAACCATGTTCTGAATGGAGACTTTTTCAGGTTCCCAAACTTGGGACAGTGCTTTCACACAGCTGCTaGGAGAAAACGCTGCAATGC +
Preference number: 4 (lower is better)
Translates to: EQPCSEWRLFQVPKLGTVLSHSC*EKTLQC
Trigger: GCATTGCAGCGTTTTCTCCCAGCAGCTGTGTGAAAG...CACTGTCCCAAGTTTGGGAACCTGAAAAAGTCTCCATTCAGAACATGGTTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TCAGAAAGGATGTGCTTAATGAAAGCCCAGCCAGTGCCAATGAGTGCAATGGTGGGTACCAGCTTCTGGTaGAGACTTTACTCTTACCTT +
Preference number: 4 (lower is better)
Translates to: SERMCLMKAQPVPMSAMVGTSFW*RLYSYL
Trigger: AAGGTAAGAGTAAAGTCTCCACCAGAAGCTGGTACC...CACCATTGCACTCATTGGCACTGGCTGGGCTTTCATTAAGCACATCCTTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR CCA 90 bp TCAGAAAGGATGTGCTTAATGAAAGCCCAGCCAGTGCCAATGAGTGCAATGGTGTTCTCCCTCGTGAACTaGCCACGTATATTCCTAAGT +
Preference number: 4 (lower is better)
Translates to: SERMCLMKAQPVPMSAMVFSLVN*PRIFLS
Trigger: ACTTAGGAATATACGTGGCCAGTTCACGAGGGAGAA...CACCATTGCACTCATTGGCACTGGCTGGGCTTTCATTAAGCACATCCTTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR TCA 90 bp TCACTTTCTTCACATACATACTCTTGGACTATGGGGACCAAGTCTGTTGAATTCTTAGGCTCCTGGCTCTaGCCAAGGACTTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: SLSSHTYSWTMGTKSVEFLGSWL*PRTFSS
Trigger: GGATGAGAAAGTCCTTGGTCAGAGCCAGGAGCCTAA...GAATTCAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CAGGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCATGTTAAAGAAAAACTaGAATGACACTGCCCCACCA +
Preference number: 4 (lower is better)
Translates to: QESWGRCYILNWVLTLLSMLKKN*NDTAPP
Trigger: TGGTGGGGCAGTGTCATTTCAGTTTTTCTTTAACAT...GGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp CTTCATAATGCATCCAGGCTCCAAGATGTAACGGCTGAGGGAAAGGATGTGGGAATGTTAAAGAAAAACTaGAATGACACTGCCCCACCA +
Preference number: 4 (lower is better)
Translates to: LHNASRLQDVTAEGKDVGMLKKN*NDTAPP
Trigger: TGGTGGGGCAGTGTCATTTCAGTTTTTCTTTAACAT...TCCCACATCCTTTCCCTCAGCCGTTACATCTTGGAGCCTGGATGCATTATGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR TCA 90 bp TCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCCGTTGGTCACCTTCTTaGCTTTCTTCATACTTTCCA +
Preference number: 4 (lower is better)
Translates to: SWGRCYILNWVLTLLSKVRWSPS*LSSYFP
Trigger: TGGAAAGTATGAAGAAAGTCAAGAAGGTGACCAACG...GACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp CAGGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCTTTCCCCCAAAATTCTaGTCAAACACAACAAAGCCA +
Preference number: 4 (lower is better)
Translates to: QESWGRCYILNWVLTLLSFPPKF*SNTTKP
Trigger: TGGCTTTGTTGTGTTTGATCAGAATTTTGGGGGAAA...GGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp TGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCACCTGTTTTCGTGCAAAACCCAGCATGTaGAATGAGGACACCTCCACG +
Preference number: 4 (lower is better)
Translates to: CYILNWVLTLLSKVTCFRAKPSM*NEDTST
Trigger: CGTGGAGGTGTCCTCATTTCACATGCTGGGTTTTGC...ACGAAAACAGGTGACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp GAACAACCATGTTCTGAATGGAGACTTTTTCAGGTTCCCAAACTTGGGACAGTGTGGCAGCATGAAGCATaGGTTGTTCCACTGTTCTAC +
Preference number: 4 (lower is better)
Translates to: EQPCSEWRLFQVPKLGTVWQHEA*VVPLFY
Trigger: GTAGAACAGTGGAACAACTCATGCTTCATGCTGCCA...CACTGTCCCAAGTTTGGGAACCTGAAAAAGTCTCCATTCAGAACATGGTTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp AAGTATTTGCTTAAATACTACCTATTCTGCCCCCAGCTGCTCCTTGAGGAAAACAGCAGCTTGGCAGCATaGAGCATGAGTTGTTCCACT +
Preference number: 4 (lower is better)
Translates to: KYLLKYYLFCPQLLLEENSSLAA*SMSCST
Trigger: AGTGGAACAACTCATGCTTCATGCTGCCAAGCTGCT...GTTTTCCTCAAGGAGCAGCTGGGGGCAGAATAGGTAGTATTTAAGCAAATACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CTTCATAATGCATCCAGGCTCCAAGATGTAACGGCTGAGGGAAAGGATGTGGGATTATCAGAAAGGATGTaGTTAATGAAAGCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LHNASRLQDVTAEGKDVGLSERM*LMKAQP
Trigger: TGGCTGGGCTTTCATTAAGCACATCCTTTCTGATAA...TCCCACATCCTTTCCCTCAGCCGTTACATCTTGGAGCCTGGATGCATTATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR GCA 90 bp TGCCTCCTACAAGTCACTAGAGTCATATTCAACATTACAAAATGCAGTGCTACTAGTTTCCTTGGACAGTaGCATCCTCAGGGTCGGCTC +
Preference number: 4 (lower is better)
Translates to: CLLQVTRVIFNITKCSATSFLGQ*HPQGRL
Trigger: GAGCCGACCCTGAGGATGGCACTGTCCAAGGAAACT...AGTAGCACTGCATTTTGTAATGTTGAATATGACTCTAGTGACTTGTAGGAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TTTTTGTCTCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCTTCTGTGAAGTATTTTaGCATCCTAAAATCCCTGAG +
Preference number: 4 (lower is better)
Translates to: FLSPKQAMALSPPFFLSPFCEVF*HPKIPE
Trigger: CTCAGGGATTTTAGGATGGCAAAATACTTCACAGAA...GGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGAGACAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp GAGGGCTTTGGTAGTCACAGATTGAGACACATTTCTGCGAAAACTGGTATTATGACATCCTGTGGTTTCTaGCTGACCCTTCTAAGCCAG +
Preference number: 4 (lower is better)
Translates to: EGFGSHRLRHISAKTGIMTSCGF*LTLLSQ
Trigger: CTGGCTTAGAAGGGTCAGGCAGAAACCACAGGATGT...CATAATACCAGTTTTCGCAGAAATGTGTCTCAATCTGTGACTACCAAAGCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CTGTCCAATAGGACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCACATCCTGTGGTTTCTaGCTGACCCTTCTAAGCCAG +
Preference number: 4 (lower is better)
Translates to: LSNRTMNKLTVSLDSAILTSCGF*LTLLSQ
Trigger: CTGGCTTAGAAGGGTCAGGCAGAAACCACAGGATGT...GAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGTCCTATTGGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp ACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCAGGGTCGGCTCTTCCACAACATCTGCTTaGGGGAGAAACAGCAAATGT +
Preference number: 4 (lower is better)
Translates to: TMNKLTVSLDSAILRVGSSTTSA*GRNSKC
Trigger: ACATTTGCTGTTTCTCCCGCAAGCAGATGTTGTGGA...AGAGCCGACCCTGAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp AAGTATTTGCTTAAATACTACCTATTCTGCCCCCAGCTGCTCCTTGAGGAAAACCCTGGCTTCCTCGCTTaGAAAACCCAGCATGTGAAA +
Preference number: 4 (lower is better)
Translates to: KYLLKYYLFCPQLLLEENPGFLA*KTQHVK
Trigger: TTTCACATGCTGGGTTTTGCAAGCGAGGAAGCCAGG...GTTTTCCTCAAGGAGCAGCTGGGGGCAGAATAGGTAGTATTTAAGCAAATACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp AGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTGTTGAACTGCAGACACCCTGCTaGCAGAACTCCAACAGGTCC +
Preference number: 4 (lower is better)
Translates to: SFCEVFCHPKIPESETVELQTPC*QNSNRS
Trigger: GGACCTGTTGGAGTTCTGGCAGCAGGGTGTCTGCAG...TTCAACAGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CCGTCCTTGCTACACTTCCCCACACATGGGGTCACAACTGCATACACCTTAGAGATGCAATTTACGATCTaGAAAAGCTGTTTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: PSLLHFPTHGVTTAYTLEMQFTI*KSCLKS
Trigger: ACTCTTCAAACAGCTTTTGCAGATCGTAAATTGCAT...CTCTAAGGTGTATGCAGTTGTGACCCCATGTGTGGGGAAGTGTAGCAAGGACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CATGCTCACTTTCTTCACATACATACTCTTGGACTATGGGGACCAAGTCTGTTGTGCTATTTACAGACCTaGAAGCCCTCCCTCAAACGA +
Preference number: 4 (lower is better)
Translates to: HAHFLHIHTLGLWGPSLLCYLQT*KPSLKR
Trigger: TCGTTTGAGGGAGGGCTTGCAGGTCTGTAAATAGCA...CAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGAGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TTCCATAAAAGAGAGTACAAAATCAGGTTTCCGCGGCACTGTGCTCCAGCCATGAATGGTGAGACTCTATaGGACTTCCTGCTCTTAGAT +
Preference number: 4 (lower is better)
Translates to: FHKREYKIRFPRHCAPAMNGETL*DFLLLD
Trigger: ATCTAAGAGCAGGAAGTCGCATAGAGTCTCACCATT...CATGGCTGGAGCACAGTGCCGCGGAAACCTGATTTTGTACTCTCTTTTATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372406.5
ENST00000610997.1
CDS-3UTR CCA 90 bp ACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCAGGGTCGGCTCTTGCCAGGACCTGGAGTaGAATGACAATCATGAAGAT +
Preference number: 4 (lower is better)
Translates to: TMNKLTVSLDSAILRVGSCQDLE*NDNHED
Trigger: ATCTTCATGATTGTCATTCCACTCCAGGTCCTGGCA...AGAGCCGACCCTGAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp TGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCACCTGTTTTCGTCCACTGGGAAGAGGATaGCACCACAACACAACAGGT +
Preference number: 4 (lower is better)
Translates to: CYILNWVLTLLSKVTCFRPLGRG*HHNTTG
Trigger: ACCTGTTGTGTTGTGGTGCCATCCTCTTCCCAGTGG...ACGAAAACAGGTGACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp TCACTTTCTTCACATACATACTCTTGGACTATGGGGACCAAGTCTGTTGAATTCCCACTGGGAAGAGGATaGCACCACAACACAACAGGT +
Preference number: 4 (lower is better)
Translates to: SLSSHTYSWTMGTKSVEFPLGRG*HHNTTG
Trigger: ACCTGTTGTGTTGTGGTGCCATCCTCTTCCCAGTGG...GAATTCAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp GAGGGCTTTGGTAGTCACAGATTGAGACACATTTCTGCGAAAACTGGTATTATGCAAAGAAGACCAGTGTaGCCGTTTCATCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: EGFGSHRLRHISAKTGIMQRRPV*PFHPGA
Trigger: AGCTCCTGGATGAAACGGCCACACTGGTCTTCTTTG...CATAATACCAGTTTTCGCAGAAATGTGTCTCAATCTGTGACTACCAAAGCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CTGTCCAATAGGACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCGCCTTCTTTTCCTGTTaGAAAGAAGACCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: LSNRTMNKLTVSLDSAILAFFSC*KEDHWA
Trigger: GGCCCAGTGGTCTTCTTTCCAACAGGAAAAGAAGGC...GAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGTCCTATTGGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp TTCCATAAAAGAGAGTACAAAATCAGGTTTCCGCGGCACTGTGCTCCAGCCATGTGTTCATTCAAGCTCTaGAAGTGTGGAAGGGAACTT +
Preference number: 4 (lower is better)
Translates to: FHKREYKIRFPRHCAPAMCSFKL*KCGREL
Trigger: AAGTTCCCTTCCACACTTCCAGAGCTTGAATGAACA...CATGGCTGGAGCACAGTGCCGCGGAAACCTGATTTTGTACTCTCTTTTATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CTGAAAACTCCTTCTGCATCCCAATCTCTAACCAGGAAAGCAAATGCTATTTACTCAGGTTCCCAAACTTaGGACAGTGAGTGTGACCCC +
Preference number: 4 (lower is better)
Translates to: LKTPSASQSLTRKANAIYSGSQT*DSECDP
Trigger: GGGGTCACACTCACTGTCCCAAGTTTGGGAACCTGA...GTAAATAGCATTTGCTTTCCTGGTTAGAGATTGGGATGCAGAAGGAGTTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp ACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCAGGGTCGGCTCTCCTACAGAACCCAGATaGCGAATCAAAGTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: TMNKLTVSLDSAILRVGSPTEPR*RIKVQK
Trigger: TTTCTGCACTTTGATTCGCCATCTGGGTTCTGTAGG...AGAGCCGACCCTGAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TCACTTTCTTCACATACATACTCTTGGACTATGGGGACCAAGTCTGTTGAATTCAGTTCCTCCACTGCCTaGCTTCCTCGCTTGCAAAAC +
Preference number: 4 (lower is better)
Translates to: SLSSHTYSWTMGTKSVEFSSSTA*LPRLQN
Trigger: GTTTTGCAAGCGAGGAAGCCAGGCAGTGGAGGAACT...GAATTCAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TTGCAAAACCCAGCATGTGAAATGAGGACACCTCCACGGAGACCCTTCCGAGCAACTCACAGAACAGGATaGAGAGCTTCAATAATTTTT +
Preference number: 4 (lower is better)
Translates to: LQNPACEMRTPPRRPFRATHRTG*RASIIF
Trigger: AAAAATTATTGAAGCTCTCCATCCTGTTCTGTGAGT...TGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATTTCACATGCTGGGTTTTGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp GAGGGCTTTGGTAGTCACAGATTGAGACACATTTCTGCGAAAACTGGTATTATGAGGGCGGGGAAACCCTaGATATTTCACTCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: EGFGSHRLRHISAKTGIMRAGKP*IFHSEV
Trigger: CACTTCAGAGTGAAATATCCAGGGTTTCCCCGCCCT...CATAATACCAGTTTTCGCAGAAATGTGTCTCAATCTGTGACTACCAAAGCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TCATTGAGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTGCTGGGCTACAGAAGTaGCCTCTGGGGAATCTGGAG +
Preference number: 4 (lower is better)
Translates to: SLSFCEVFCHPKIPESETAGLQK*PLGNLE
Trigger: CTCCAGATTCCCCAGAGGCCACTTCTGTAGCCCAGC...AGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACTCAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp AGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTGTTGAAGATGTGTGGGGCCCATaGCCTGGCAGTGAACCATCT +
Preference number: 4 (lower is better)
Translates to: SFCEVFCHPKIPESETVEDVWGP*PGSEPS
Trigger: AGATGGTTCACTGCCAGGCCATGGGCCCCACACATC...TTCAACAGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR CAA 72 bp AACCACCACCTGCTTTCCCAATCTTGGGCTGGGGTTTaGACTTTTCTTGATCATCAATCTGACTTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: NHHLLSQSWAGV*TFLDHQSDLKP
Trigger: AGGCTTCAAGTCAGATTGATGATCAAGAAAAGTCAAAACCCCAGCCCAAGATTGGGAAAGCAGGTGGTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TTCCATAAAAGAGAGTACAAAATCAGGTTTCCGCGGCACTGTGCTCCAGCCATGATGTTAAAGAAAAACTaGAATGACACTGCCCCACCA +
Preference number: 4 (lower is better)
Translates to: FHKREYKIRFPRHCAPAMMLKKN*NDTAPP
Trigger: TGGTGGGGCAGTGTCATTTCAGTTTTTCTTTAACAT...CATGGCTGGAGCACAGTGCCGCGGAAACCTGATTTTGTACTCTCTTTTATGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp CATGCTCACTTTCTTCACATACATACTCTTGGACTATGGGGACCAAGTCTGTTGCGTTTTCGAAGGATATaGATCCAGATGGTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: HAHFLHIHTLGLWGPSLLRFRRI*IQMVPE
Trigger: TTCTGGGACCATCTGGATTCATATCCTTCGAAAACG...CAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGAGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp GAACAACCATGTTCTGAATGGAGACTTTTTCAGGTTCCCAAACTTGGGACAGTGCTTCTTGTAAATGTCTaGTTGACCACACCACTGGGA +
Preference number: 4 (lower is better)
Translates to: EQPCSEWRLFQVPKLGTVLLVNV*LTTPLG
Trigger: TCCCAGTGGTGTGGTCAATCAGACATTTACAAGAAG...CACTGTCCCAAGTTTGGGAACCTGAAAAAGTCTCCATTCAGAACATGGTTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TCATTGAGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTACCCAGCATGTGAAATaGGGACACCTCCACGGAGAC +
Preference number: 4 (lower is better)
Translates to: SLSFCEVFCHPKIPESETTQHVK*GHLHGD
Trigger: GTCTCCGTGGAGGTGTCCTCATTTCACATGCTGGGT...AGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACTCAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp AGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTGTTGAACATACGCGTGGAATCTaGACACCCAACGCTGGCGTT +
Preference number: 4 (lower is better)
Translates to: SFCEVFCHPKIPESETVEHTRGI*TPNAGV
Trigger: AACGCCAGCGTTGGGTGTTCAGATTCCACGCGTATG...TTCAACAGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCGGATTTACAGATCAATaGCTGTTCCTATTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: SWGRCYILNWVLTLLSKVGFTDQ*LFLLSK
Trigger: CTTGGACAATAGGAACAGTCATTGATCTGTAAATCC...GACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CAGGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCCTGGATATTTCACTCTaGAGTGGTTTCTTGAAAGAA +
Preference number: 4 (lower is better)
Translates to: QESWGRCYILNWVLTLLSLDISL*SGFLKE
Trigger: TTCTTTCAAGAAACCACTTCAGAGTGAAATATCCAG...GGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CTGTCCAATAGGACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCTGGCAGCATGAAGCATaGGTTGTTCCACTGTTCTAC +
Preference number: 4 (lower is better)
Translates to: LSNRTMNKLTVSLDSAILWQHEA*VVPLFY
Trigger: GTAGAACAGTGGAACAACTCATGCTTCATGCTGCCA...GAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGTCCTATTGGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCACCTGTTTTCGTAGCAGCTTGGCAGCATaGAGCATGAGTTGTTCCACT +
Preference number: 4 (lower is better)
Translates to: CYILNWVLTLLSKVTCFRSSLAA*SMSCST
Trigger: AGTGGAACAACTCATGCTTCATGCTGCCAAGCTGCT...ACGAAAACAGGTGACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCACCTGTTTTCGTAAGCTGTCCTGTGGGTaGGTTGGCTGTTCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: CYILNWVLTLLSKVTCFRKLSCG*VGCSVS
Trigger: TGAAACAGAACAGCCAACTCACCCACAGGACAGCTT...ACGAAAACAGGTGACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp GGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAATTATCAGAAAGGATGTaGTTAATGAAAGCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: GILGQVLHPKLGFDFAFQLSERM*LMKAQP
Trigger: TGGCTGGGCTTTCATTAAGCACATCCTTTCTGATAA...TTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp TGCCTCCTACAAGTCACTAGAGTCATATTCAACATTACAAAATGCAGTGCTACTAGCCATATTCAGTCGTaGCCTCCTCGGTGGACTCTA +
Preference number: 4 (lower is better)
Translates to: CLLQVTRVIFNITKCSATSHIQS*PPRWTL
Trigger: TAGAGTCCACCGAGGAGGGCACGACTGAATATGGCT...AGTAGCACTGCATTTTGTAATGTTGAATATGACTCTAGTGACTTGTAGGAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp AAGTATTTGCTTAAATACTACCTATTCTGCCCCCAGCTGCTCCTTGAGGAAAACAAATACTACCTATTCTaGCCCCAGCTGCTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: KYLLKYYLFCPQLLLEENKYYLF*PQLLLE
Trigger: CTCAAGGAGCAGCTGGGGGCAGAATAGGTAGTATTT...GTTTTCCTCAAGGAGCAGCTGGGGGCAGAATAGGTAGTATTTAAGCAAATACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp TTTTTGTCTCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCATTTTCTCTCTGAGTTaGAATACTGCTCAATTTAGG +
Preference number: 4 (lower is better)
Translates to: FLSPKQAMALSPPFFLSPIFSLS*NTAQFR
Trigger: CCTAAATTGAGCAGTATTGCAACTCAGAGAGAAAAT...GGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGAGACAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CATGCTCACTTTCTTCACATACATACTCTTGGACTATGGGGACCAAGTCTGTTGTCCACAACATCTGCTTaGGGGAGAAACAGCAAATGT +
Preference number: 4 (lower is better)
Translates to: HAHFLHIHTLGLWGPSLLSTTSA*GRNSKC
Trigger: ACATTTGCTGTTTCTCCCGCAAGCAGATGTTGTGGA...CAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGAGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCACCTGTTTTCGTCCTGGCTTCCTCGCTTaGAAAACCCAGCATGTGAAA +
Preference number: 4 (lower is better)
Translates to: CYILNWVLTLLSKVTCFRPGFLA*KTQHVK
Trigger: TTTCACATGCTGGGTTTTGCAAGCGAGGAAGCCAGG...ACGAAAACAGGTGACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TGCCTCCTACAAGTCACTAGAGTCATATTCAACATTACAAAATGCAGTGCTACTCTTGGAACCACCACCTaGTTTCCCAATCTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: CLLQVTRVIFNITKCSATLGTTT*FPNLGL
Trigger: CAGCCCAAGATTGGGAAAGCAGGTGGTGGTTCCAAG...AGTAGCACTGCATTTTGTAATGTTGAATATGACTCTAGTGACTTGTAGGAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CTGTCCAATAGGACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCGCTGGGAGAAAACGCTaGAATGCACCAAAGCCTTTA +
Preference number: 4 (lower is better)
Translates to: LSNRTMNKLTVSLDSAILAGRKR*NAPKPL
Trigger: TAAAGGCTTTGGTGCATTGCAGCGTTTTCTCCCAGC...GAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGTCCTATTGGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CTGTCCAATAGGACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCACCGCCTCATCTGGCTaGTTCCTCCAAAATCCAAAA +
Preference number: 4 (lower is better)
Translates to: LSNRTMNKLTVSLDSAILTASSG*FLQNPK
Trigger: TTTTGGATTTTGGAGGAAGCAGCCAGATGAGGCGGT...GAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGTCCTATTGGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp AGGATGTGGGAAGCGGGAACCTCCCATTACGACTGTGGAGTACAATGCAGTAAAAAGAAGGGAAAACTCTaGCTTAGGCTAATCATCAAA +
Preference number: 4 (lower is better)
Translates to: RMWEAGTSHYDCGVQCSKKKGKL*LRLIIK
Trigger: TTTGATGATTAGCCTAAGGCAGAGTTTTCCCTTCTT...TTTACTGCATTGTACTCCACAGTCGTAATGGGAGGTTCCCGCTTCCCACATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR CCA 90 bp GAACAACCATGTTCTGAATGGAGACTTTTTCAGGTTCCCAAACTTGGGACAGTGAGGATTTCTCTCCCATaGCCTTTGAATCCACTGTAC +
Preference number: 4 (lower is better)
Translates to: EQPCSEWRLFQVPKLGTVRISLP*PLNPLY
Trigger: GTACAGTGGATTCAAAGGCCATGGGAGAGAAATCCT...CACTGTCCCAAGTTTGGGAACCTGAAAAAGTCTCCATTCAGAACATGGTTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TTCCATAAAAGAGAGTACAAAATCAGGTTTCCGCGGCACTGTGCTCCAGCCATGGGATATGAATCCAGATaGTCCCAGAAAGAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: FHKREYKIRFPRHCAPAMGYESR*SQKERR
Trigger: TCTTCTTTCTTTCTGGGACCATCTGGATTCATATCC...CATGGCTGGAGCACAGTGCCGCGGAAACCTGATTTTGTACTCTCTTTTATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp GAACAACCATGTTCTGAATGGAGACTTTTTCAGGTTCCCAAACTTGGGACAGTGCTGCTTTCCCAATCTTaGGCTGGGGTTTTGACTTTT +
Preference number: 4 (lower is better)
Translates to: EQPCSEWRLFQVPKLGTVLLSQS*AGVLTF
Trigger: AAAAGTCAAAACCCCAGCCCAAGATTGGGAAAGCAG...CACTGTCCCAAGTTTGGGAACCTGAAAAAGTCTCCATTCAGAACATGGTTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TCATTGAGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTGCTGGTGAAGCCACTTaGCTTTGGACTCCATCGGTC +
Preference number: 4 (lower is better)
Translates to: SLSFCEVFCHPKIPESETAGEAT*LWTPSV
Trigger: GACCGATGGAGTCCAAAGCCAAGTGGCTTCACCAGC...AGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACTCAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCTATAAATACCACCAATaGTTCTGCTATGTGCATCCG +
Preference number: 4 (lower is better)
Translates to: SWGRCYILNWVLTLLSKVYKYHQ*FCYVHP
Trigger: CGGATGCACATAGCAGAACCATTGGTGGTATTTATA...GACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TTCCATAAAAGAGAGTACAAAATCAGGTTTCCGCGGCACTGTGCTCCAGCCATGTTCTCAGAGGAAACATaGATATTTTGCGTAGGCAGA +
Preference number: 4 (lower is better)
Translates to: FHKREYKIRFPRHCAPAMFSEET*IFCVGR
Trigger: TCTGCCTACGCAAAATATCCATGTTTCCTCTGAGAA...CATGGCTGGAGCACAGTGCCGCGGAAACCTGATTTTGTACTCTCTTTTATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CTGAAAACTCCTTCTGCATCCCAATCTCTAACCAGGAAAGCAAATGCTATTTACCGCTATGCTCTTCCTTaGTCTGTAAGGACTGGATGC +
Preference number: 4 (lower is better)
Translates to: LKTPSASQSLTRKANAIYRYALP*SVRTGC
Trigger: GCATCCAGTCCTTACAGACCAAGGAAGAGCATAGCG...GTAAATAGCATTTGCTTTCCTGGTTAGAGATTGGGATGCAGAAGGAGTTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCACCTGTTTTCGTCGCTATGCTCTTCCTTaGTCTGTAAGGACTGGATGC +
Preference number: 4 (lower is better)
Translates to: CYILNWVLTLLSKVTCFRRYALP*SVRTGC
Trigger: GCATCCAGTCCTTACAGACCAAGGAAGAGCATAGCG...ACGAAAACAGGTGACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR CAA 72 bp AAACCTTGCCTCAAAATAAGCTGTCCTGTGGGTGAGTaGGCTGTTCTGTTTCATTCTGACCATTCTGACTCT +
Preference number: 4 (lower is better)
Translates to: KPCLKISCPVGE*AVLFHSDHSDS
Trigger: AGAGTCAGAATGGTCAGAATGAAACAGAACAGCCAACTCACCCACAGGACAGCTTATTTTGAGGCAAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCACCTGTTTTCGTCCATGTACCCATCCTTaGAGAAGCCAAAGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: CYILNWVLTLLSKVTCFRPCTHP*RSQRCS
Trigger: TGAACACCTTTGGCTTCTTCAAGGATGGGTACATGG...ACGAAAACAGGTGACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp TCACTTTCTTCACATACATACTCTTGGACTATGGGGACCAAGTCTGTTGAATTCAGGAATTTCTCCTGCTaGGAGGTAGCTGTCAGGATT +
Preference number: 4 (lower is better)
Translates to: SLSSHTYSWTMGTKSVEFRNFSC*EVAVRI
Trigger: AATCCTGACAGCTACCTCTCAGCAGGAGAAATTCCT...GAATTCAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CATGCTCACTTTCTTCACATACATACTCTTGGACTATGGGGACCAAGTCTGTTGCGTTGGTCACCTTCTTaGCTTTCTTCATACTTTCCA +
Preference number: 4 (lower is better)
Translates to: HAHFLHIHTLGLWGPSLLRWSPS*LSSYFP
Trigger: TGGAAAGTATGAAGAAAGTCAAGAAGGTGACCAACG...CAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGAGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCGGGGACCAAGTCTGTTaGATTCATCTATTTAGAAAT +
Preference number: 4 (lower is better)
Translates to: SWGRCYILNWVLTLLSKVGDQVC*IHLFRN
Trigger: ATTTCTAAATAGATGAATTCAACAGACTTGGTCCCC...GACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TCATTGAGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTGACCAAGAAATGGGCTaGTCAAGTCCTTGGCCACTC +
Preference number: 4 (lower is better)
Translates to: SLSFCEVFCHPKIPESETDQEMG*SSPWPL
Trigger: GAGTGGCCAAGGACTTGATCAGCCCATTTCTTGGTC...AGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACTCAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TTCCATAAAAGAGAGTACAAAATCAGGTTTCCGCGGCACTGTGCTCCAGCCATGCTGGATATTTCACTCTaGAGTGGTTTCTTGAAAGAA +
Preference number: 4 (lower is better)
Translates to: FHKREYKIRFPRHCAPAMLDISL*SGFLKE
Trigger: TTCTTTCAAGAAACCACTTCAGAGTGAAATATCCAG...CATGGCTGGAGCACAGTGCCGCGGAAACCTGATTTTGTACTCTCTTTTATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp GGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAACTGGATATTTCACTCTaGAGTGGTTTCTTGAAAGAA +
Preference number: 4 (lower is better)
Translates to: GILGQVLHPKLGFDFAFQLDISL*SGFLKE
Trigger: TTCTTTCAAGAAACCACTTCAGAGTGAAATATCCAG...TTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp ACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCAGGGTCGGCTCTAAGCCATTAACTTGCTaGATCCTAAAGGGAAGAATC +
Preference number: 4 (lower is better)
Translates to: TMNKLTVSLDSAILRVGSKPLTC*ILKGRI
Trigger: GATTCTTCCCTTTAGGATTCAGCAAGTTAATGGCTT...AGAGCCGACCCTGAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp AAGTATTTGCTTAAATACTACCTATTCTGCCCCCAGCTGCTCCTTGAGGAAAACATGTCTGACTTCTTTTaGGGTCACACGACTAGGCAA +
Preference number: 4 (lower is better)
Translates to: KYLLKYYLFCPQLLLEENMSDFF*GHTTRQ
Trigger: TTGCCTAGTCGTGTGACCTCAAAAGAAGTCAGACAT...GTTTTCCTCAAGGAGCAGCTGGGGGCAGAATAGGTAGTATTTAAGCAAATACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TGCCTCCTACAAGTCACTAGAGTCATATTCAACATTACAAAATGCAGTGCTACTGTTCACTGTAGGAGCTaGTCCTGCTGTCCAATAGGA +
Preference number: 4 (lower is better)
Translates to: CLLQVTRVIFNITKCSATVHCRS*SCCPIG
Trigger: TCCTATTGGACAGCAGGAGCAGCTCCTACAGTGAAC...AGTAGCACTGCATTTTGTAATGTTGAATATGACTCTAGTGACTTGTAGGAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TGCCTCCTACAAGTCACTAGAGTCATATTCAACATTACAAAATGCAGTGCTACTACATGGGGTCACAACTaGATACACCTTAGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: CLLQVTRVIFNITKCSATTWGHN*IHLRAP
Trigger: CGGAGCTCTAAGGTGTATGCAGTTGTGACCCCATGT...AGTAGCACTGCATTTTGTAATGTTGAATATGACTCTAGTGACTTGTAGGAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCACCTGTTTTCGTTATTCTGCCCCCAGCTaGTCCTTGAGGAAAACTTTC +
Preference number: 4 (lower is better)
Translates to: CYILNWVLTLLSKVTCFRYSAPS*SLRKTF
Trigger: GAAAGTTTTCCTCAAGGAGCAGCTGGGGGCAGAATA...ACGAAAACAGGTGACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp TGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCACCTGTTTTCGTAAATACTACCTATTCTaGCCCCAGCTGCTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: CYILNWVLTLLSKVTCFRKYYLF*PQLLLE
Trigger: CTCAAGGAGCAGCTGGGGGCAGAATAGGTAGTATTT...ACGAAAACAGGTGACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR GCA 90 bp CAGGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCATTTTCTCTCTGAGTTaGAATACTGCTCAATTTAGG +
Preference number: 4 (lower is better)
Translates to: QESWGRCYILNWVLTLLSIFSLS*NTAQFR
Trigger: CCTAAATTGAGCAGTATTGCAACTCAGAGAGAAAAT...GGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CTGAAAACTCCTTCTGCATCCCAATCTCTAACCAGGAAAGCAAATGCTATTTACGGTACCAGCTTCTGGTaGAGACTTTACTCTTACCTC +
Preference number: 4 (lower is better)
Translates to: LKTPSASQSLTRKANAIYGTSFW*RLYSYL
Trigger: GAGGTAAGAGTAAAGTCTCCACCAGAAGCTGGTACC...GTAAATAGCATTTGCTTTCCTGGTTAGAGATTGGGATGCAGAAGGAGTTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp GAGGGCTTTGGTAGTCACAGATTGAGACACATTTCTGCGAAAACTGGTATTATGACATTTGCCAGGACCTaGAGTGGAATGACAATCATG +
Preference number: 4 (lower is better)
Translates to: EGFGSHRLRHISAKTGIMTFART*SGMTIM
Trigger: CATGATTGTCATTCCACTCCAGGTCCTGGCAAATGT...CATAATACCAGTTTTCGCAGAAATGTGTCTCAATCTGTGACTACCAAAGCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp GAACAACCATGTTCTGAATGGAGACTTTTTCAGGTTCCCAAACTTGGGACAGTGGTTACAATACAGACATaGCCAGATGACCTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: EQPCSEWRLFQVPKLGTVVTIQT*PDDLLV
Trigger: AACAAGCAGGTCATCTGGCCATGTCTGTATTGTAAC...CACTGTCCCAAGTTTGGGAACCTGAAAAAGTCTCCATTCAGAACATGGTTGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TCACTTTCTTCACATACATACTCTTGGACTATGGGGACCAAGTCTGTTGAATTCGAAGCCACTTGGCTTTaGACTCCATCGGTCATCTTT +
Preference number: 4 (lower is better)
Translates to: SLSSHTYSWTMGTKSVEFEATWL*TPSVIF
Trigger: AAAGATGACCGATGGAGTCCAAAGCCAAGTGGCTTC...GAATTCAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR CAA 72 bp ACCACCAATGGTTCTGCTATGTGCATCCGATATTTTTaGCCCGATCTGAAATACTGCAAGGGCTTAACCATT +
Preference number: 4 (lower is better)
Translates to: TTNGSAMCIRYF*PDLKYCKGLTI
Trigger: AATGGTTAAGCCCTTGCAGTATTTCAGATCGGGCAAAAAATATCGGATGCACATAGCAGAACCATTGGTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
3UTR CAA 72 bp AAGCCCCTATTAGTGCTCAGATATAGGTCAAAGTCATaGTGCTGTGAAAAGCCACGCAGTTATCTGACGATA +
Preference number: 4 (lower is better)
Translates to: KPLLVLRYRSKS*CCEKPRSYLTI
Trigger: TATCGTCAGATAACTGCGTGGCTTTTCACAGCACAATGACTTTGACCTATATCTGAGCACTAATAGGGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR TCA 90 bp TGCCTCCTACAAGTCACTAGAGTCATATTCAACATTACAAAATGCAGTGCTACTCCATGTACCCATCCTTaGAGAAGCCAAAGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: CLLQVTRVIFNITKCSATPCTHP*RSQRCS
Trigger: TGAACACCTTTGGCTTCTTCAAGGATGGGTACATGG...AGTAGCACTGCATTTTGTAATGTTGAATATGACTCTAGTGACTTGTAGGAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TCATTGAGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTTCAGTGAGAGGCTACTaGCATTCACCACCATGTACC +
Preference number: 4 (lower is better)
Translates to: SLSFCEVFCHPKIPESETSVRGY*HSPPCT
Trigger: GGTACATGGTGGTGAATGTCAGTAGCCTCTCACTGA...AGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACTCAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TCATTAGCAGACTTAGAGATGACTCAGAAGATTCCATTTTCAGACGTAAGCGCCCTAGGATTAAAAGGGTaGCAGAGACAGACTGTTTCT +
Preference number: 4 (lower is better)
Translates to: SLADLEMTQKIPFSDVSALGLKG*QRQTVS
Trigger: AGAAACAGTCTGTCTCTGTCACCCTTTTAATCCTAG...GGCGCTTACGTCTGAAAATGGAATCTTCTGAGTCATCTCTAAGTCTGCTAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR TCA 90 bp TCACTTTCTTCACATACATACTCTTGGACTATGGGGACCAAGTCTGTTGAATTCCTCTCCCATGGCCTTTaGATCCACTGTACTTCTTTT +
Preference number: 4 (lower is better)
Translates to: SLSSHTYSWTMGTKSVEFLSHGL*IHCTSF
Trigger: AAAAGAAGTACAGTGGATTCAAAGGCCATGGGAGAG...GAATTCAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCACCTGTTTTCGTCTTCTTGTAAATGTCTaGTTGACCACACCACTGGGA +
Preference number: 4 (lower is better)
Translates to: CYILNWVLTLLSKVTCFRLLVNV*LTTPLG
Trigger: TCCCAGTGGTGTGGTCAATCAGACATTTACAAGAAG...ACGAAAACAGGTGACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp TCATTGAGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTCATTCAAACACCGCATaGCAACGAACCCAGTGGACT +
Preference number: 4 (lower is better)
Translates to: SLSFCEVFCHPKIPESETHSNTA*QRTQWT
Trigger: AGTCCACTGGGTTCGTTGTCATGCGGTGTTTGAATG...AGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACTCAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCATTTTCTCTCTGAGTTaGAATACTGCTCAATTTAGG +
Preference number: 4 (lower is better)
Translates to: SWGRCYILNWVLTLLSKVIFSLS*NTAQFR
Trigger: CCTAAATTGAGCAGTATTGCAACTCAGAGAGAAAAT...GACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CTGAAAACTCCTTCTGCATCCCAATCTCTAACCAGGAAAGCAAATGCTATTTACGATGGCGAATCAAAGTaGAGAAAAAGAACACCCGCT +
Preference number: 4 (lower is better)
Translates to: LKTPSASQSLTRKANAIYDGESK*RKRTPA
Trigger: AGCGGGTGTTCTTTTTCTGCACTTTGATTCGCCATC...GTAAATAGCATTTGCTTTCCTGGTTAGAGATTGGGATGCAGAAGGAGTTTTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TGCCTCCTACAAGTCACTAGAGTCATATTCAACATTACAAAATGCAGTGCTACTCTCATCCACAACATCTaGTTGCGGGAGAAACAGCAA +
Preference number: 4 (lower is better)
Translates to: CLLQVTRVIFNITKCSATLIHNI*LREKQQ
Trigger: TTGCTGTTTCTCCCGCAAGCAGATGTTGTGGATGAG...AGTAGCACTGCATTTTGTAATGTTGAATATGACTCTAGTGACTTGTAGGAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TCATTGAGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTCACACCTTTCGTTCTTaGCAAGGAGTCTATCGCCTC +
Preference number: 4 (lower is better)
Translates to: SLSFCEVFCHPKIPESETHTFRS*QGVYRL
Trigger: GAGGCGATAGACTCCTTGGCAAGAACGAAAGGTGTG...AGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACTCAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TTCCATAAAAGAGAGTACAAAATCAGGTTTCCGCGGCACTGTGCTCCAGCCATGATGCAATTTACGATCTaGAAAAGCTGTTTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: FHKREYKIRFPRHCAPAMMQFTI*KSCLKS
Trigger: ACTCTTCAAACAGCTTTTGCAGATCGTAAATTGCAT...CATGGCTGGAGCACAGTGCCGCGGAAACCTGATTTTGTACTCTCTTTTATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp GAGGGCTTTGGTAGTCACAGATTGAGACACATTTCTGCGAAAACTGGTATTATGACTGAAAACTCCTTCTaGATCCCAATCTCTAACCAG +
Preference number: 4 (lower is better)
Translates to: EGFGSHRLRHISAKTGIMTENSF*IPISNQ
Trigger: CTGGTTAGAGATTGGGATGCAGAAGGAGTTTTCAGT...CATAATACCAGTTTTCGCAGAAATGTGTCTCAATCTGTGACTACCAAAGCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CTGTCCAATAGGACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCGCCGCCATCAGCCAGTaGATTTTAAATACATCATTC +
Preference number: 4 (lower is better)
Translates to: LSNRTMNKLTVSLDSAILAAISQ*ILNTSF
Trigger: GAATGATGTATTTAAAATCCACTGGCTGATGGCGGC...GAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGTCCTATTGGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp CATGCTCACTTTCTTCACATACATACTCTTGGACTATGGGGACCAAGTCTGTTGTGCTACATCCTAAACTaGGTTTTGACTTTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: HAHFLHIHTLGLWGPSLLCYILN*VLTLLS
Trigger: GGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCA...CAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGAGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp AGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTGTTGAAGTCACTCTCAGCATCTaGAATAAGGGTCTGGGGCAA +
Preference number: 4 (lower is better)
Translates to: SFCEVFCHPKIPESETVEVTLSI*NKGLGQ
Trigger: TTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGAC...TTCAACAGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CTGTCCAATAGGACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCTGTTCATTCAAGCTCTaGAAGTGTGGAAGGGAACTT +
Preference number: 4 (lower is better)
Translates to: LSNRTMNKLTVSLDSAILCSFKL*KCGREL
Trigger: AAGTTCCCTTCCACACTTCCAGAGCTTGAATGAACA...GAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGTCCTATTGGACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp AGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTGTTGAACTTTCACACAGCTGCTaGGAGAAAACGCTGCAATGC +
Preference number: 4 (lower is better)
Translates to: SFCEVFCHPKIPESETVELSHSC*EKTLQC
Trigger: GCATTGCAGCGTTTTCTCCCAGCAGCTGTGTGAAAG...TTCAACAGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TGCCTCCTACAAGTCACTAGAGTCATATTCAACATTACAAAATGCAGTGCTACTTACAGAAGTGGCCTCTaGGGAATCTGGAGTATGTTC +
Preference number: 4 (lower is better)
Translates to: CLLQVTRVIFNITKCSATYRSGL*GIWSMF
Trigger: GAACATACTCCAGATTCCCCAGAGGCCACTTCTGTA...AGTAGCACTGCATTTTGTAATGTTGAATATGACTCTAGTGACTTGTAGGAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCACCTGTTTTCGTCCAAAGGTGTTCAGATaGACTTTATGCCTCACATCA +
Preference number: 4 (lower is better)
Translates to: CYILNWVLTLLSKVTCFRPKVFR*TLCLTS
Trigger: TGATGTGAGGCATAAAGTTCATCTGAACACCTTTGG...ACGAAAACAGGTGACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp CTGTCCAATAGGACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCAAAAAGGTCCAGAAGTaGACACTTAGGGTGCATTTA +
Preference number: 4 (lower is better)
Translates to: LSNRTMNKLTVSLDSAILKKVQK*TLRVHL
Trigger: TAAATGCACCCTAAGTGTTCACTTCTGGACCTTTTT...GAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGTCCTATTGGACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TCATTGAGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTCTCATCCACAACATCTaGTTGCGGGAGAAACAGCAA +
Preference number: 4 (lower is better)
Translates to: SLSFCEVFCHPKIPESETLIHNI*LREKQQ
Trigger: TTGCTGTTTCTCCCGCAAGCAGATGTTGTGGATGAG...AGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACTCAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp AGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTGTTGAAGCATCTCCTCACAAGTaGCTCCTACAAGTCACTAGA +
Preference number: 4 (lower is better)
Translates to: SFCEVFCHPKIPESETVEASPHK*LLQVTR
Trigger: TCTAGTGACTTGTAGGAGGCACTTGTGAGGAGATGC...TTCAACAGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TCATTGAGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTGGTACCAGCTTCTGGTaGAGACTTTACTCTTACCTC +
Preference number: 4 (lower is better)
Translates to: SLSFCEVFCHPKIPESETGTSFW*RLYSYL
Trigger: GAGGTAAGAGTAAAGTCTCCACCAGAAGCTGGTACC...AGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACTCAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TCACTTTCTTCACATACATACTCTTGGACTATGGGGACCAAGTCTGTTGAATTCCAACCATGTTCTGAATaGAGACTTTTTCAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: SLSSHTYSWTMGTKSVEFQPCSE*RLFQVP
Trigger: GGGAACCTGAAAAAGTCTCCATTCAGAACATGGTTG...GAATTCAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp GAACAACCATGTTCTGAATGGAGACTTTTTCAGGTTCCCAAACTTGGGACAGTGCATTTCTGCGAAAACTaGTATTATGTTTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: EQPCSEWRLFQVPKLGTVHFCEN*YYVSAQ
Trigger: CTGTGCAGAAACATAATACCAGTTTTCGCAGAAATG...CACTGTCCCAAGTTTGGGAACCTGAAAAAGTCTCCATTCAGAACATGGTTGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CTGTCCAATAGGACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCTTGTTAGGAAGGCTGTaGCCATCTTTGTTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: LSNRTMNKLTVSLDSAILLLGRL*PSLFLK
Trigger: TTTCAGAAACAAAGATGGCCACAGCCTTCCTAACAA...GAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGTCCTATTGGACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp AAGTATTTGCTTAAATACTACCTATTCTGCCCCCAGCTGCTCCTTGAGGAAAACGAAGACCAGCCTATATaGCCCAGAGCAATAATATTT +
Preference number: 4 (lower is better)
Translates to: KYLLKYYLFCPQLLLEENEDQPI*PRAIIF
Trigger: AAATATTATTGCTCTGGGCCATATAGGCTGGTCTTC...GTTTTCCTCAAGGAGCAGCTGGGGGCAGAATAGGTAGTATTTAAGCAAATACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CTGTCCAATAGGACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCGAAGACCAGCCTATATaGCCCAGAGCAATAATATTT +
Preference number: 4 (lower is better)
Translates to: LSNRTMNKLTVSLDSAILEDQPI*PRAIIF
Trigger: AAATATTATTGCTCTGGGCCATATAGGCTGGTCTTC...GAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGTCCTATTGGACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TCATTGAGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTTTGGTCTGTAAGGACTaGATGCCTGGAGTAGACTGT +
Preference number: 4 (lower is better)
Translates to: SLSFCEVFCHPKIPESETLVCKD*MPGVDC
Trigger: ACAGTCTACTCCAGGCATCCAGTCCTTACAGACCAA...AGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACTCAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp CTGTCCAATAGGACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCAAAGAAAAACTGAAATaGCACTGCCCCACCATTATT +
Preference number: 4 (lower is better)
Translates to: LSNRTMNKLTVSLDSAILKEKLK*HCPTII
Trigger: AATAATGGTGGGGCAGTGTCATTTCAGTTTTTCTTT...GAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGTCCTATTGGACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR TCA 90 bp TCATTAGCAGACTTAGAGATGACTCAGAAGATTCCATTTTCAGACGTAAGCGCCAAAGAAAAACTGAAATaGCACTGCCCCACCATTATT +
Preference number: 4 (lower is better)
Translates to: SLADLEMTQKIPFSDVSAKEKLK*HCPTII
Trigger: AATAATGGTGGGGCAGTGTCATTTCAGTTTTTCTTT...GGCGCTTACGTCTGAAAATGGAATCTTCTGAGTCATCTCTAAGTCTGCTAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR TCA 90 bp AGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTGTTGAACGTTTTCGAAGGATATaGATCCAGATGGTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: SFCEVFCHPKIPESETVERFRRI*IQMVPE
Trigger: TTCTGGGACCATCTGGATTCATATCCTTCGAAAACG...TTCAACAGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TCATTGAGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTCGTTTTCGAAGGATATaGATCCAGATGGTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: SLSFCEVFCHPKIPESETRFRRI*IQMVPE
Trigger: TTCTGGGACCATCTGGATTCATATCCTTCGAAAACG...AGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACTCAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TCATTGAGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTCTTCTTGTAAATGTCTaGTTGACCACACCACTGGGA +
Preference number: 4 (lower is better)
Translates to: SLSFCEVFCHPKIPESETLLVNV*LTTPLG
Trigger: TCCCAGTGGTGTGGTCAATCAGACATTTACAAGAAG...AGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACTCAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp AAGTATTTGCTTAAATACTACCTATTCTGCCCCCAGCTGCTCCTTGAGGAAAACTCTGAAGTGGTTTCTTaGAAGAAAACTCAACTGACT +
Preference number: 4 (lower is better)
Translates to: KYLLKYYLFCPQLLLEENSEVVS*KKTQLT
Trigger: AGTCAGTTGAGTTTTCTTTCAAGAAACCACTTCAGA...GTTTTCCTCAAGGAGCAGCTGGGGGCAGAATAGGTAGTATTTAAGCAAATACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CTGAAAACTCCTTCTGCATCCCAATCTCTAACCAGGAAAGCAAATGCTATTTACTTATCAGAAAGGATGTaGTTAATGAAAGCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LKTPSASQSLTRKANAIYLSERM*LMKAQP
Trigger: TGGCTGGGCTTTCATTAAGCACATCCTTTCTGATAA...GTAAATAGCATTTGCTTTCCTGGTTAGAGATTGGGATGCAGAAGGAGTTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp CTGTCCAATAGGACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCTTCTGTGAAGTATTTTaGCATCCTAAAATCCCTGAG +
Preference number: 4 (lower is better)
Translates to: LSNRTMNKLTVSLDSAILFCEVF*HPKIPE
Trigger: CTCAGGGATTTTAGGATGGCAAAATACTTCACAGAA...GAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGTCCTATTGGACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TCACTTTCTTCACATACATACTCTTGGACTATGGGGACCAAGTCTGTTGAATTCTACCACCAATGGTTCTaGTATGTGCATCCGATATTT +
Preference number: 4 (lower is better)
Translates to: SLSSHTYSWTMGTKSVEFYHQWF*YVHPIF
Trigger: AAATATCGGATGCACATAGCAGAACCATTGGTGGTA...GAATTCAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TCATTGAGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTCTTTTAAAAACGCCCTaGCAGAAACACCCTAGGGAA +
Preference number: 4 (lower is better)
Translates to: SLSFCEVFCHPKIPESETLLKTP*QKHPRE
Trigger: TTCCCTAGGGTGTTTCTGGCAGGGCGTTTTTAAAAG...AGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACTCAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TGCCTCCTACAAGTCACTAGAGTCATATTCAACATTACAAAATGCAGTGCTACTACTGAAAACTCCTTCTaGATCCCAATCTCTAACCAG +
Preference number: 4 (lower is better)
Translates to: CLLQVTRVIFNITKCSATTENSF*IPISNQ
Trigger: CTGGTTAGAGATTGGGATGCAGAAGGAGTTTTCAGT...AGTAGCACTGCATTTTGTAATGTTGAATATGACTCTAGTGACTTGTAGGAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp AGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTGTTGAAAGGATTTCTCTCCCATaGCCTTTGAATCCACTGTAC +
Preference number: 4 (lower is better)
Translates to: SFCEVFCHPKIPESETVERISLP*PLNPLY
Trigger: GTACAGTGGATTCAAAGGCCATGGGAGAGAAATCCT...TTCAACAGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp AGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTGTTGAACCTACAGAACCCAGATaGCGAATCAAAGTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: SFCEVFCHPKIPESETVEPTEPR*RIKVQK
Trigger: TTTCTGCACTTTGATTCGCCATCTGGGTTCTGTAGG...TTCAACAGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CTGAAAACTCCTTCTGCATCCCAATCTCTAACCAGGAAAGCAAATGCTATTTACTATAAATACCACCAATaGTTCTGCTATGTGCATCCG +
Preference number: 4 (lower is better)
Translates to: LKTPSASQSLTRKANAIYYKYHQ*FCYVHP
Trigger: CGGATGCACATAGCAGAACCATTGGTGGTATTTATA...GTAAATAGCATTTGCTTTCCTGGTTAGAGATTGGGATGCAGAAGGAGTTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TCACTTTCTTCACATACATACTCTTGGACTATGGGGACCAAGTCTGTTGAATTCTCTGAAGTGGTTTCTTaGAAGAAAACTCAACTGACT +
Preference number: 4 (lower is better)
Translates to: SLSSHTYSWTMGTKSVEFSEVVS*KKTQLT
Trigger: AGTCAGTTGAGTTTTCTTTCAAGAAACCACTTCAGA...GAATTCAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CTGAAAACTCCTTCTGCATCCCAATCTCTAACCAGGAAAGCAAATGCTATTTACCTCTTACCTCACTTCTaGAGATGTCTAGGATTAAAA +
Preference number: 4 (lower is better)
Translates to: LKTPSASQSLTRKANAIYLLPHF*RCLGLK
Trigger: TTTTAATCCTAGACATCTCCAGAAGTGAGGTAAGAG...GTAAATAGCATTTGCTTTCCTGGTTAGAGATTGGGATGCAGAAGGAGTTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCACCTGTTTTCGTCTCTTACCTCACTTCTaGAGATGTCTAGGATTAAAA +
Preference number: 4 (lower is better)
Translates to: CYILNWVLTLLSKVTCFRLLPHF*RCLGLK
Trigger: TTTTAATCCTAGACATCTCCAGAAGTGAGGTAAGAG...ACGAAAACAGGTGACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CCA 90 bp AGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTGTTGAACATACTCTTGGACTATaGGGACCAAGTCTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: SFCEVFCHPKIPESETVEHTLGL*GPSLLN
Trigger: ATTCAACAGACTTGGTCCCCATAGTCCAAGAGTATG...TTCAACAGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp AGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTGTTGAAACACCCATTTTAGTGTaGAGGAAGACCAGCCTATAT +
Preference number: 4 (lower is better)
Translates to: SFCEVFCHPKIPESETVETPILV*RKTSLY
Trigger: ATATAGGCTGGTCTTCCTCCACACTAAAATGGGTGT...TTCAACAGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TCATTGAGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTAAAAAGGTCCAGAAGTaGACACTTAGGGTGCATTTA +
Preference number: 4 (lower is better)
Translates to: SLSFCEVFCHPKIPESETKKVQK*TLRVHL
Trigger: TAAATGCACCCTAAGTGTTCACTTCTGGACCTTTTT...AGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACTCAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp AGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTGTTGAATTGGTAGTCACAGATTaGGACACATTTCTGCGAAAA +
Preference number: 4 (lower is better)
Translates to: SFCEVFCHPKIPESETVELVVTD*DTFLRK
Trigger: TTTTCGCAGAAATGTGTCTCAATCTGTGACTACCAA...TTCAACAGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR TCA 90 bp TCATTGAGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTGGATTTACAGATCAATaGCTGTTCCTATTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: SLSFCEVFCHPKIPESETGFTDQ*LFLLSK
Trigger: CTTGGACAATAGGAACAGTCATTGATCTGTAAATCC...AGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACTCAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR GCA 90 bp TCATTGAGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTAGTGAACACTTAGGGTaGATTTACCTTTCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: SLSFCEVFCHPKIPESETSEHLG*IYLSPE
Trigger: TTCAGGAGAAAGGTAAATGCACCCTAAGTGTTCACT...AGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACTCAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp TCATTGAGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTGGATATGAATCCAGATaGTCCCAGAAAGAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: SLSFCEVFCHPKIPESETGYESR*SQKERR
Trigger: TCTTCTTTCTTTCTGGGACCATCTGGATTCATATCC...AGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACTCAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp AGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTGTTGAATTGTTAGGAAGGCTGTaGCCATCTTTGTTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: SFCEVFCHPKIPESETVELLGRL*PSLFLK
Trigger: TTTCAGAAACAAAGATGGCCACAGCCTTCCTAACAA...TTCAACAGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp CTGAAAACTCCTTCTGCATCCCAATCTCTAACCAGGAAAGCAAATGCTATTTACACTCACAGAACAGGATaGAGAGCTTCAATAATTTTT +
Preference number: 4 (lower is better)
Translates to: LKTPSASQSLTRKANAIYTHRTG*RASIIF
Trigger: AAAAATTATTGAAGCTCTCCATCCTGTTCTGTGAGT...GTAAATAGCATTTGCTTTCCTGGTTAGAGATTGGGATGCAGAAGGAGTTTTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CCA 90 bp AGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTGTTGAAGAAGACCAGCCTATATaGCCCAGAGCAATAATATTT +
Preference number: 4 (lower is better)
Translates to: SFCEVFCHPKIPESETVEEDQPI*PRAIIF
Trigger: AAATATTATTGCTCTGGGCCATATAGGCTGGTCTTC...TTCAACAGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS CCA 90 bp GCGGCCCAGGCCAGGCTCGGCCAGCAACTGCAGCAAACCCAGCATTaGGAGCAGCCGGAGGCCCGCGGCCAGCCTAGGACCGCGGGAGGC +
Preference number: 5 (lower is better)
Translates to: AAQARLGQQLQQTQH*EQPEARGQPRTAGG
Trigger: GCCTCCCGCGGTCCTAGGCTGGCCGCGGGCCTCCGGCTGCTCCCAATGCTGGGTTTGCTGCAGTTGCTGGCCGAGCCTGGCCTGGGCCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000493417.5
ENST00000610997.1
CDS-3UTR CAA 90 bp GGCGCCCGCTGGCAGGACCTGCCTTCCTTTACTGTTGCCGTGGAGCTGAGCAGAATGGGGAGATGCTGTTaGGCGCCCGCTGGCAGGACC +
Preference number: 5 (lower is better)
Translates to: GARWQDLPSFTVAVELSRMGRCC*APAGRT
Trigger: GGTCCTGCCAGCGGGCGCCAAACAGCATCTCCCCAT...TCTGCTCAGCTCCACGGCAACAGTAAAGGAAGGCAGGTCCTGCCAGCGGGCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS CCA 90 bp AGCGGGGCTCGGCGGCTAGCTCCGCTGACCCTGTGGTCGTTTTCCTaGAGATTGCGACCTAGGAAGTCGTCGAGGAGCCTGTGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: SGARRLAPLTLWSFS*RLRPRKSSRSLCCP
Trigger: TGGGCAGCACAGGCTCCTCGACGACTTCCTAGGTCGCAATCTCCAGGAAAACGACCACAGGGTCAGCGGAGCTAGCCGCCGAGCCCCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp AACCACGCAGAGAGGCTCAGATGCATCGCTGGGCTACAGAAGTGGCCTCTGGGGGCAGCAAACCCAGCATaGGGAGCAGCCGGAGGCCCG +
Preference number: 5 (lower is better)
Translates to: NHAERLRCIAGLQKWPLGAANPA*GAAGGP
Trigger: CGGGCCTCCGGCTGCTCCCAATGCTGGGTTTGCTGC...CCCCAGAGGCCACTTCTGTAGCCCAGCGATGCATCTGAGCCTCTCTGCGTGGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp AACCACGCAGAGAGGCTCAGATGCATCGCTGGGCTACAGAAGTGGCCTCTGGGGCTGCGGCTCCAGCGCTaGTCCACACACACGCCTGCC +
Preference number: 5 (lower is better)
Translates to: NHAERLRCIAGLQKWPLGLRLQR*STHTPA
Trigger: GGCAGGCGTGTGTGTGGACAAGCGCTGGAGCCGCAG...CCCCAGAGGCCACTTCTGTAGCCCAGCGATGCATCTGAGCCTCTCTGCGTGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS TCA 90 bp ACAGAGACAGGAGTGCTGGGAACCGGGTTCGGTGATGGCTCGGGCTaGGAAGAATCCCTCTGCCGGGGAATCGGGGAAGCCAGGAAGCCC +
Preference number: 5 (lower is better)
Translates to: TETGVLGTGFGDGSG*EESLCRGIGEARKP
Trigger: GGGCTTCCTGGCTTCCCCGATTCCCCGGCAGAGGGATTCTTCTCAGCCCGAGCCATCACCGAACCCGGTTCCCAGCACTCCTGTCTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415344.1
CDS GCA 90 bp TCGTTTTCCTGGAGATTGCGACCTAGGAAGTCGTCGAGGAGCCTGTaGTGCCCACCTCGGGGCCCTTCGATCGGCCGCTCCTGTGCAGAC +
Preference number: 5 (lower is better)
Translates to: SFSWRLRPRKSSRSL*CPPRGPSIGRSCAD
Trigger: GTCTGCACAGGAGCGGCCGATCGAAGGGCCCCGAGGTGGGCAGCACAGGCTCCTCGACGACTTCCTAGGTCGCAATCTCCAGGAAAACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp TCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCAGGGTCCTGCAGCAAACCCAGCATaGGGAGCAGCCGGAGGCCCG +
Preference number: 5 (lower is better)
Translates to: SQTGNGTLPALLLKSQGPAANPA*GAAGGP
Trigger: CGGGCCTCCGGCTGCTCCCAATGCTGGGTTTGCTGC...AGGACCCTGGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS GCA 90 bp GAGCCTGTGCTGCCCACCTCGGGGCCCTTCGATCGGCCGCTCCTGTaGAGACTTTCAGTTAGAGATGAAGCCAACCTATTGGCGGTTGCC +
Preference number: 5 (lower is better)
Translates to: EPVLPTSGPFDRPLL*RLSVRDEANLLAVA
Trigger: GGCAACCGCCAATAGGTTGGCTTCATCTCTAACTGAAAGTCTGCACAGGAGCGGCCGATCGAAGGGCCCCGAGGTGGGCAGCACAGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372406.5
CDS CCA 90 bp CATCCTCAGGGTCGGCTCTGTCACACGGCGCCTTCCCACTCGCCCTaGGGCTCCACGGAGCCGTTGGTCACCTTCTTGACTTTCTTCATA +
Preference number: 5 (lower is better)
Translates to: HPQGRLCHTAPSHSP*GSTEPLVTFLTFFI
Trigger: TATGAAGAAAGTCAAGAAGGTGACCAACGGCTCCGTGGAGCCCCAGGGCGAGTGGGAAGGCGCCGTGTGACAGAGCCGACCCTGAGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp GCGATGAGGTCATCACGCAGGAGGAAATCTCACCCACACGAGGTGGACTTACAGCTGCGGCTCCAGCGCTaGTCCACACACACGCCTGCC +
Preference number: 5 (lower is better)
Translates to: AMRSSRRRKSHPHEVDLQLRLQR*STHTPA
Trigger: GGCAGGCGTGTGTGTGGACAAGCGCTGGAGCCGCAG...CTGTAAGTCCACCTCGTGTGGGTGAGATTTCCTCCTGCGTGATGACCTCATCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS TCA 90 bp AAAGCCACTTCCAACAGAGACAGGAGTGCTGGGAACCGGGTTCGGTaGTGGCTCGGGCTGAGAAGAATCCCTCTGCCGGGGAATCGGGGA +
Preference number: 5 (lower is better)
Translates to: KATSNRDRSAGNRVR*WLGLRRIPLPGNRG
Trigger: TCCCCGATTCCCCGGCAGAGGGATTCTTCTCAGCCCGAGCCATCACCGAACCCGGTTCCCAGCACTCCTGTCTCTGTTGGAAGTGGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415344.1
CDS-3UTR CAA 90 bp GTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGCTGCAGGAGGGTGGCTaGTCAGCTGGTGAAGCCACT +
Preference number: 5 (lower is better)
Translates to: VLVTLSIWNKGLGQSRGQLQEGG*SAGEAT
Trigger: AGTGGCTTCACCAGCTGACAAGCCACCCTCCTGCAG...CTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp AACCACGCAGAGAGGCTCAGATGCATCGCTGGGCTACAGAAGTGGCCTCTGGGGACCAAGGAAAGAGACTaGGTGAAAGGAAGGGCCGCC +
Preference number: 5 (lower is better)
Translates to: NHAERLRCIAGLQKWPLGTKERD*VKGRAA
Trigger: GGCGGCCCTTCCTTTCACCAAGTCTCTTTCCTTGGT...CCCCAGAGGCCACTTCTGTAGCCCAGCGATGCATCTGAGCCTCTCTGCGTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp TCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGGGCTCCACGGAGCCGTaGGTCACCTTCTTGACTTTC +
Preference number: 5 (lower is better)
Translates to: SWSLSASGIRVWGKAEGRGSTEP*VTFLTF
Trigger: GAAAGTCAAGAAGGTGACCAACGGCTCCGTGGAGCC...CCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp GCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGGGCTCCACGGAGCCGTaGGTCACCTTCTTGACTTTC +
Preference number: 5 (lower is better)
Translates to: AVLVTLSIWNKGLGQSRGGSTEP*VTFLTF
Trigger: GAAAGTCAAGAAGGTGACCAACGGCTCCGTGGAGCC...CCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp CCCACCTGCAGACACCCTGCTGCCAGAACTCCAACAGGTCCCCGAGGTAGCGAGTCACACCTTTCGTTCTaGCCAAGGAGTCTATCGCCT +
Preference number: 5 (lower is better)
Translates to: PTCRHPAARTPTGPRGSESHLSF*PRSLSP
Trigger: AGGCGATAGACTCCTTGGCAAGAACGAAAGGTGTGA...CTCGCTACCTCGGGGACCTGTTGGAGTTCTGGCAGCAGGGTGTCTGCAGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp TGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTTTTGAACTGCGGCTCCAGCGCTaGTCCACACACACGCCTGCC +
Preference number: 5 (lower is better)
Translates to: WAVREWMSRQRHRIMLFELRLQR*STHTPA
Trigger: GGCAGGCGTGTGTGTGGACAAGCGCTGGAGCCGCAG...TTCAAAAAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp CCGCGGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATCCTGCTTTCCCAATCTaGGGCTGGGGTTTTGACTTT +
Preference number: 5 (lower is better)
Translates to: PRHCAPAMCPGVTVGGANPAFPI*GWGFDF
Trigger: AAAGTCAAAACCCCAGCCCAAGATTGGGAAAGCAGG...ATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCCGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp CTGCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGCTGCAGGAGGGTGGCTaGTCAGCTGGTGAAGCCACT +
Preference number: 5 (lower is better)
Translates to: LLSWSLSASGIRVWGKAELQEGG*SAGEAT
Trigger: AGTGGCTTCACCAGCTGACAAGCCACCCTCCTGCAG...CTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp CATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCACCAGCCTGCAGGAGGGTGGCTaGTCAGCTGGTGAAGCCACT +
Preference number: 5 (lower is better)
Translates to: HFLKHQTDTSHPPSPSTSLQEGG*SAGEAT
Trigger: AGTGGCTTCACCAGCTGACAAGCCACCCTCCTGCAG...GCTGGTGGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS GCA 90 bp TCTTCCACAGCAACCCTGCAAAGCCACTTCCAACAGAGACAGGAGTaGTGGGAACCGGGTTCGGTGATGGCTCGGGCTGAGAAGAATCCC +
Preference number: 5 (lower is better)
Translates to: SSTATLQSHFQQRQE*WEPGSVMARAEKNP
Trigger: GGGATTCTTCTCAGCCCGAGCCATCACCGAACCCGGTTCCCAGCACTCCTGTCTCTGTTGGAAGTGGCTTTGCAGGGTTGCTGTGGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415344.1
CDS CCA 90 bp TCCACAGCAACCCTGCAAAGCCACTTCCAACAGAGACAGGAGTGCTaGGAACCGGGTTCGGTGATGGCTCGGGCTGAGAAGAATCCCTCT +
Preference number: 5 (lower is better)
Translates to: STATLQSHFQQRQEC*EPGSVMARAEKNPS
Trigger: AGAGGGATTCTTCTCAGCCCGAGCCATCACCGAACCCGGTTCCCAGCACTCCTGTCTCTGTTGGAAGTGGCTTTGCAGGGTTGCTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415344.1
CDS-3UTR CAA 90 bp AATGAGGACACCTCCACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTCCAGAGCGGCCATGTTaGTTCCAGCATCACCAGCCG +
Preference number: 5 (lower is better)
Translates to: NEDTSTETLPSREVSSHLPERPC*FQHHQP
Trigger: CGGCTGGTGATGCTGGAACAAACATGGCCGCTCTGG...AAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp GCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTACCAAGGAAAGAGACTaGGTGAAAGGAAGGGCCGCC +
Preference number: 5 (lower is better)
Translates to: AALGCQGVDVQATPQDNATKERD*VKGRAA
Trigger: GGCGGCCCTTCCTTTCACCAAGTCTCTTTCCTTGGT...AGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp TCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGACCAAGGAAAGAGACTaGGTGAAAGGAAGGGCCGCC +
Preference number: 5 (lower is better)
Translates to: SWSLSASGIRVWGKAEGRTKERD*VKGRAA
Trigger: GGCGGCCCTTCCTTTCACCAAGTCTCTTTCCTTGGT...CCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp TCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCAGGGTCCTGGCTCCACGGAGCCGTaGGTCACCTTCTTGACTTTC +
Preference number: 5 (lower is better)
Translates to: SQTGNGTLPALLLKSQGPGSTEP*VTFLTF
Trigger: GAAAGTCAAGAAGGTGACCAACGGCTCCGTGGAGCC...AGGACCCTGGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp CATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCACCAGCGGTGGGCTCCAGCTTTaGGAAGCAACCCTACCTAGC +
Preference number: 5 (lower is better)
Translates to: HFLKHQTDTSHPPSPSTSGGLQL*EATLPS
Trigger: GCTAGGTAGGGTTGCTTCCAAAAGCTGGAGCCCACC...GCTGGTGGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp CCCACCTGCAGACACCCTGCTGCCAGAACTCCAACAGGTCCCCGAGGTAGCGAGATCCACAACATCTGCTaGCGGGAGAAACAGCAAATG +
Preference number: 5 (lower is better)
Translates to: PTCRHPAARTPTGPRGSEIHNIC*REKQQM
Trigger: CATTTGCTGTTTCTCCCGCAAGCAGATGTTGTGGAT...CTCGCTACCTCGGGGACCTGTTGGAGTTCTGGCAGCAGGGTGTCTGCAGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp GCGATGAGGTCATCACGCAGGAGGAAATCTCACCCACACGAGGTGGACTTACAGGGTGGGCTCCAGCTTTaGGAAGCAACCCTACCTAGC +
Preference number: 5 (lower is better)
Translates to: AMRSSRRRKSHPHEVDLQGGLQL*EATLPS
Trigger: GCTAGGTAGGGTTGCTTCCAAAAGCTGGAGCCCACC...CTGTAAGTCCACCTCGTGTGGGTGAGATTTCCTCCTGCGTGATGACCTCATCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp CACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTTCGTTCTTGCCAAGGGTGGGCTCCAGCTTTaGGAAGCAACCCTACCTAGC +
Preference number: 5 (lower is better)
Translates to: HGDPSEQGGFITPFVLAKGGLQL*EATLPS
Trigger: GCTAGGTAGGGTTGCTTCCAAAAGCTGGAGCCCACC...CTTGGCAAGAACGAAAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp TTTTTGTCTCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCGGCCTGGGAAGGCGCTaGCTCTTCCTCCACATCAGC +
Preference number: 5 (lower is better)
Translates to: FLSPKQAMALSPPFFLSPGLGRR*LFLHIS
Trigger: GCTGATGTGGAGGAAGAGCAAGCGCCTTCCCAGGCC...GGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGAGACAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp ACCCACACGAGGTGGACTTACAGGGCTGTGTGCTGCCTGGGCAGGCTGGACATGAAGACACACGGATGCTaGCCTAAAATATCTGCCGAG +
Preference number: 5 (lower is better)
Translates to: THTRWTYRAVCCLGRLDMKTHGC*PKISAE
Trigger: CTCGGCAGATATTTTAGGCAAGCATCCGTGTGTCTT...CATGTCCAGCCTGCCCAGGCAGCACACAGCCCTGTAAGTCCACCTCGTGTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp ACCCACACGAGGTGGACTTACAGGGCTGTGTGCTGCCTGGGCAGGCTGGACATGATCCACAACATCTGCTaGCGGGAGAAACAGCAAATG +
Preference number: 5 (lower is better)
Translates to: THTRWTYRAVCCLGRLDMIHNIC*REKQQM
Trigger: CATTTGCTGTTTCTCCCGCAAGCAGATGTTGTGGAT...CATGTCCAGCCTGCCCAGGCAGCACACAGCCCTGTAAGTCCACCTCGTGTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp GGCGCCCGCTGGCAGGACCTGCCTTCCTTTACTGTTGCCGTGGAGCTGAGCAGATATAGGTCAAAGTCATaGTGCTGTGAAAAGCCACGC +
Preference number: 5 (lower is better)
Translates to: GARWQDLPSFTVAVELSRYRSKS*CCEKPR
Trigger: GCGTGGCTTTTCACAGCACAATGACTTTGACCTATA...TCTGCTCAGCTCCACGGCAACAGTAAAGGAAGGCAGGTCCTGCCAGCGGGCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS TCA 90 bp CTTCCCACTCGCCCTGGGGCTCCACGGAGCCGTTGGTCACCTTCTTaGCTTTCTTCATACTTTCCATCACCCCAGATGTTGTCACAACGG +
Preference number: 5 (lower is better)
Translates to: LPTRPGAPRSRWSPS*LSSYFPSPQMLSQR
Trigger: CCGTTGTGACAACATCTGGGGTGATGGAAAGTATGAAGAAAGTCAAGAAGGTGACCAACGGCTCCGTGGAGCCCCAGGGCGAGTGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp TTCCTCTGCATGGGGAGATGCTGTTTGGCGCCCGCTGGCAGGACCTGCCTTCCTCCAATAGTCACATCCTaGTCTTCAGGCTCATTCAGT +
Preference number: 5 (lower is better)
Translates to: FLCMGRCCLAPAGRTCLPPIVTS*SSGSFS
Trigger: ACTGAATGAGCCTGAAGACAAGGATGTGACTATTGG...AGGAAGGCAGGTCCTGCCAGCGGGCGCCAAACAGCATCTCCCCATGCAGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR CAA 90 bp AATGAGGACACCTCCACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTACCAAGGAAAGAGACTaGGTGAAAGGAAGGGCCGCC +
Preference number: 5 (lower is better)
Translates to: NEDTSTETLPSREVSSHLTKERD*VKGRAA
Trigger: GGCGGCCCTTCCTTTCACCAAGTCTCTTTCCTTGGT...AAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp CCCACCTGCAGACACCCTGCTGCCAGAACTCCAACAGGTCCCCGAGGTAGCGAGTGTAGTGGTAGTCAATaGCATGGAACACCAAGGAAA +
Preference number: 5 (lower is better)
Translates to: PTCRHPAARTPTGPRGSECSGSQ*HGTPRK
Trigger: TTTCCTTGGTGTTCCATGCAATTGACTACCACTACA...CTCGCTACCTCGGGGACCTGTTGGAGTTCTGGCAGCAGGGTGTCTGCAGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp GCGATGAGGTCATCACGCAGGAGGAAATCTCACCCACACGAGGTGGACTTACAGGCCTGGCTTCCTCGCTaGCAAAACCCAGCATGTGAA +
Preference number: 5 (lower is better)
Translates to: AMRSSRRRKSHPHEVDLQAWLPR*QNPACE
Trigger: TTCACATGCTGGGTTTTGCAAGCGAGGAAGCCAGGC...CTGTAAGTCCACCTCGTGTGGGTGAGATTTCCTCCTGCGTGATGACCTCATCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp GGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATAGTTTCGCTATGCTCTTCCTaGGTCTGTAAGGACTGGATG +
Preference number: 5 (lower is better)
Translates to: GTVLQPCALVSLSVVPIVSLCSS*VCKDWM
Trigger: CATCCAGTCCTTACAGACCAAGGAAGAGCATAGCGA...AACTATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp ACCTCCCACCACCTGTGCTGTGCCACAGGGCATGATCCTGACAGCGACATCACATCGCTATGCTCTTCCTaGGTCTGTAAGGACTGGATG +
Preference number: 5 (lower is better)
Translates to: TSHHLCCATGHDPDSDITSLCSS*VCKDWM
Trigger: CATCCAGTCCTTACAGACCAAGGAAGAGCATAGCGA...TGTGATGTCGCTGTCAGGATCATGCCCTGTGGCACAGCACAGGTGGTGGGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp CAGGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCCCAGAGCGGCCATGTTaGTTCCAGCATCACCAGCCG +
Preference number: 5 (lower is better)
Translates to: QESWGRCYILNWVLTLLSPERPC*FQHHQP
Trigger: CGGCTGGTGATGCTGGAACAAACATGGCCGCTCTGG...GGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp GGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATAGTTACCATGTACCCATCCTaGAAGAAGCCAAAGGTGTTC +
Preference number: 5 (lower is better)
Translates to: GTVLQPCALVSLSVVPIVTMYPS*KKPKVF
Trigger: GAACACCTTTGGCTTCTTCAAGGATGGGTACATGGT...AACTATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp GACAGTGCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATCCGTTGGTCACCTTCTaGACTTTCTTCATACTTTCC +
Preference number: 5 (lower is better)
Translates to: DSAALGCQGVDVQATPQDPLVTF*TFFILS
Trigger: GGAAAGTATGAAGAAAGTCAAGAAGGTGACCAACGG...ATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGCACTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp GTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGAAGTTAACAGTTTCCTaGGACAGTGCCATCCTCAGG +
Preference number: 5 (lower is better)
Translates to: VLVTLSIWNKGLGQSRGQKLTVS*DSAILR
Trigger: CCTGAGGATGGCACTGTCCAAGGAAACTGTTAACTT...CTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp CCGCGGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATTGTTTTCGTTCATTTTaGTCTCCCAAACAGGCAATG +
Preference number: 5 (lower is better)
Translates to: PRHCAPAMCPGVTVGGANCFRSF*SPKQAM
Trigger: CATTGCCTGTTTGGGAGACAAAAATGAACGAAAACA...ATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCCGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp GCGATGAGGTCATCACGCAGGAGGAAATCTCACCCACACGAGGTGGACTTACAGTCGTTTTCCTGGAGATaGCGACCTAGGAAGTCGTCG +
Preference number: 5 (lower is better)
Translates to: AMRSSRRRKSHPHEVDLQSFSWR*RPRKSS
Trigger: CGACGACTTCCTAGGTCGCAATCTCCAGGAAAACGA...CTGTAAGTCCACCTCGTGTGGGTGAGATTTCCTCCTGCGTGATGACCTCATCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372406.5
ENST00000372410.7
CDS CCA 90 bp AAGTGGTCTTATTGCTCTTCGGAGCCCACAGCCCAGGAGAAGAGATaGTCTTCCACAGCAACCCTGCAAAGCCACTTCCAACAGAGACAG +
Preference number: 5 (lower is better)
Translates to: KWSYCSSEPTAQEKR*SSTATLQSHFQQRQ
Trigger: CTGTCTCTGTTGGAAGTGGCTTTGCAGGGTTGCTGTGGAAGACCATCTCTTCTCCTGGGCTGTGGGCTCCGAAGAGCAATAAGACCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415344.1
CDS-3UTR CAA 90 bp CTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTAGACTTTCCACCATCTaGTGTCTTCTGGGTCTGGTT +
Preference number: 5 (lower is better)
Translates to: LLWAVREWMSRQRHRIMLRLSTI*CLLGLV
Trigger: AACCAGACCCAGAAGACACAAGATGGTGGAAAGTCT...AAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp GCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTCTCTCCCATGGCCTTaGAATCCACTGTACTTCTTT +
Preference number: 5 (lower is better)
Translates to: AALGCQGVDVQATPQDNASLPWP*NPLYFF
Trigger: AAAGAAGTACAGTGGATTCAAAGGCCATGGGAGAGA...AGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp GCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTACTGTAAAGGCCTTCTaGGTCATCAGTGCTGATGTT +
Preference number: 5 (lower is better)
Translates to: AALGCQGVDVQATPQDNATVKAF*VISADV
Trigger: AACATCAGCACTGATGACCAAGAAGGCCTTTACAGT...AGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp AATAGAGAGTCCTTCCACAAGCCATATTCAGTCGTGCCCTCCTCGGTGGACTCTACCAAGGAAAGAGACTaGGTGAAAGGAAGGGCCGCC +
Preference number: 5 (lower is better)
Translates to: NRESFHKPYSVVPSSVDSTKERD*VKGRAA
Trigger: GGCGGCCCTTCCTTTCACCAAGTCTCTTTCCTTGGT...AGAGTCCACCGAGGAGGGCACGACTGAATATGGCTTGTGGAAGGACTCTCTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR CAA 90 bp AATGAGGACACCTCCACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTCCATCACCCCAGATGTaGTCACAACGGACTCCATTT +
Preference number: 5 (lower is better)
Translates to: NEDTSTETLPSREVSSHLPSPQM*SQRTPF
Trigger: AAATGGAGTCCGTTGTGACAACATCTGGGGTGATGG...AAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp CACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTTCGTTCTTGCCAAGCCATCACCCCAGATGTaGTCACAACGGACTCCATTT +
Preference number: 5 (lower is better)
Translates to: HGDPSEQGGFITPFVLAKPSPQM*SQRTPF
Trigger: AAATGGAGTCCGTTGTGACAACATCTGGGGTGATGG...CTTGGCAAGAACGAAAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp ACCTCCCACCACCTGTGCTGTGCCACAGGGCATGATCCTGACAGCGACATCACACCGTTGGTCACCTTCTaGACTTTCTTCATACTTTCC +
Preference number: 5 (lower is better)
Translates to: TSHHLCCATGHDPDSDITPLVTF*TFFILS
Trigger: GGAAAGTATGAAGAAAGTCAAGAAGGTGACCAACGG...TGTGATGTCGCTGTCAGGATCATGCCCTGTGGCACAGCACAGGTGGTGGGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp CTGCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGAAGTTAACAGTTTCCTaGGACAGTGCCATCCTCAGG +
Preference number: 5 (lower is better)
Translates to: LLSWSLSASGIRVWGKAEKLTVS*DSAILR
Trigger: CCTGAGGATGGCACTGTCCAAGGAAACTGTTAACTT...CTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp GGCACTGTGCTCCAGCCATGTGCCCTGGTGTCACTGTCGGTGGTGCCAATAGTTTTCACATACATACTCTaGGACTATGGGGACCAAGTC +
Preference number: 5 (lower is better)
Translates to: GTVLQPCALVSLSVVPIVFTYIL*DYGDQV
Trigger: GACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAA...AACTATTGGCACCACCGACAGTGACACCAGGGCACATGGCTGGAGCACAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp TCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCAGGGTCCTAAGACACACGGATGCTaGCCTAAAATATCTGCCGAG +
Preference number: 5 (lower is better)
Translates to: SQTGNGTLPALLLKSQGPKTHGC*PKISAE
Trigger: CTCGGCAGATATTTTAGGCAAGCATCCGTGTGTCTT...AGGACCCTGGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp TGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTTTTGAAGCCTGGCTTCCTCGCTaGCAAAACCCAGCATGTGAA +
Preference number: 5 (lower is better)
Translates to: WAVREWMSRQRHRIMLFEAWLPR*QNPACE
Trigger: TTCACATGCTGGGTTTTGCAAGCGAGGAAGCCAGGC...TTCAAAAAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp AACCACGCAGAGAGGCTCAGATGCATCGCTGGGCTACAGAAGTGGCCTCTGGGGTCTTGGGCTGGGGTTTaGACTTTTCTTGATCATCAA +
Preference number: 5 (lower is better)
Translates to: NHAERLRCIAGLQKWPLGSWAGV*TFLDHQ
Trigger: TTGATGATCAAGAAAAGTCAAAACCCCAGCCCAAGA...CCCCAGAGGCCACTTCTGTAGCCCAGCGATGCATCTGAGCCTCTCTGCGTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp GACAGTGCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATTCTTGGGCTGGGGTTTaGACTTTTCTTGATCATCAA +
Preference number: 5 (lower is better)
Translates to: DSAALGCQGVDVQATPQDSWAGV*TFLDHQ
Trigger: TTGATGATCAAGAAAAGTCAAAACCCCAGCCCAAGA...ATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGCACTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp GCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTCTAGATCTGTTTCCTTaGAAGTACAGCAGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: AALGCQGVDVQATPQDNALDLFP*KYSSLA
Trigger: TGCCAAGCTGCTGTACTTCAAAGGAAACAGATCTAG...AGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp CATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCACCAGCCCAATAGTCACATCCTaGTCTTCAGGCTCATTCAGT +
Preference number: 5 (lower is better)
Translates to: HFLKHQTDTSHPPSPSTSPIVTS*SSGSFS
Trigger: ACTGAATGAGCCTGAAGACAAGGATGTGACTATTGG...GCTGGTGGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp TCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCAGGGTCCTCCAATAGTCACATCCTaGTCTTCAGGCTCATTCAGT +
Preference number: 5 (lower is better)
Translates to: SQTGNGTLPALLLKSQGPPIVTS*SSGSFS
Trigger: ACTGAATGAGCCTGAAGACAAGGATGTGACTATTGG...AGGACCCTGGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp GCGATGAGGTCATCACGCAGGAGGAAATCTCACCCACACGAGGTGGACTTACAGAGACTTTCCACCATCTaGTGTCTTCTGGGTCTGGTT +
Preference number: 5 (lower is better)
Translates to: AMRSSRRRKSHPHEVDLQRLSTI*CLLGLV
Trigger: AACCAGACCCAGAAGACACAAGATGGTGGAAAGTCT...CTGTAAGTCCACCTCGTGTGGGTGAGATTTCCTCCTGCGTGATGACCTCATCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp TCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCAGGGTCCTACTGTAAAGGCCTTCTaGGTCATCAGTGCTGATGTT +
Preference number: 5 (lower is better)
Translates to: SQTGNGTLPALLLKSQGPTVKAF*VISADV
Trigger: AACATCAGCACTGATGACCAAGAAGGCCTTTACAGT...AGGACCCTGGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp CTGCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGACTGTAAAGGCCTTCTaGGTCATCAGTGCTGATGTT +
Preference number: 5 (lower is better)
Translates to: LLSWSLSASGIRVWGKAETVKAF*VISADV
Trigger: AACATCAGCACTGATGACCAAGAAGGCCTTTACAGT...CTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp GCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTAATGGAACAGCGAGTTaGAGGAGAAATGCAATGATC +
Preference number: 5 (lower is better)
Translates to: AALGCQGVDVQATPQDNANGTAS*RRNAMI
Trigger: GATCATTGCATTTCTCCTCAAACTCGCTGTTCCATT...AGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp TGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTTTTGAAGCCCCCAGCTGCTCCTaGAGGAAAACTTTCCATTTC +
Preference number: 5 (lower is better)
Translates to: WAVREWMSRQRHRIMLFEAPSCS*RKTFHF
Trigger: GAAATGGAAAGTTTTCCTCAAGGAGCAGCTGGGGGC...TTCAAAAAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp CAGGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCGCCTGGCTTCCTCGCTaGCAAAACCCAGCATGTGAA +
Preference number: 5 (lower is better)
Translates to: QESWGRCYILNWVLTLLSAWLPR*QNPACE
Trigger: TTCACATGCTGGGTTTTGCAAGCGAGGAAGCCAGGC...GGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp TCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCAGGGTCCTCTAGATCTGTTTCCTTaGAAGTACAGCAGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: SQTGNGTLPALLLKSQGPLDLFP*KYSSLA
Trigger: TGCCAAGCTGCTGTACTTCAAAGGAAACAGATCTAG...AGGACCCTGGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp CTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTATCTGCAAAAGCTGTTaGAAGAGTCAAAGCCCCCAT +
Preference number: 5 (lower is better)
Translates to: LLWAVREWMSRQRHRIMLICKSC*KSQSPH
Trigger: ATGGGGGCTTTGACTCTTCAAACAGCTTTTGCAGAT...AAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp TGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTTTTGAATCGTTTTCCTGGAGATaGCGACCTAGGAAGTCGTCG +
Preference number: 5 (lower is better)
Translates to: WAVREWMSRQRHRIMLFESFSWR*RPRKSS
Trigger: CGACGACTTCCTAGGTCGCAATCTCCAGGAAAACGA...TTCAAAAAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp CCGTCCTTGCTACACTTCCCCACACATGGGGTCACAACTGCATACACCTTAGAGACCATGTACCCATCCTaGAAGAAGCCAAAGGTGTTC +
Preference number: 5 (lower is better)
Translates to: PSLLHFPTHGVTTAYTLETMYPS*KKPKVF
Trigger: GAACACCTTTGGCTTCTTCAAGGATGGGTACATGGT...CTCTAAGGTGTATGCAGTTGTGACCCCATGTGTGGGGAAGTGTAGCAAGGACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp GCGATGAGGTCATCACGCAGGAGGAAATCTCACCCACACGAGGTGGACTTACAGCCAATAGTCACATCCTaGTCTTCAGGCTCATTCAGT +
Preference number: 5 (lower is better)
Translates to: AMRSSRRRKSHPHEVDLQPIVTS*SSGSFS
Trigger: ACTGAATGAGCCTGAAGACAAGGATGTGACTATTGG...CTGTAAGTCCACCTCGTGTGGGTGAGATTTCCTCCTGCGTGATGACCTCATCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp CCCATTACGACTGTGGAGTACAATGCAGTAAAGGAGACGATGCTGCGACCCGGCTCTCTCCCATGGCCTTaGAATCCACTGTACTTCTTT +
Preference number: 5 (lower is better)
Translates to: PITTVEYNAVKETMLRPGSLPWP*NPLYFF
Trigger: AAAGAAGTACAGTGGATTCAAAGGCCATGGGAGAGA...GCCGGGTCGCAGCATCGTCTCCTTTACTGCATTGTACTCCACAGTCGTAATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR CAA 90 bp CTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTTGTAGTGGTAGTCAATaGCATGGAACACCAAGGAAA +
Preference number: 5 (lower is better)
Translates to: LLWAVREWMSRQRHRIMLCSGSQ*HGTPRK
Trigger: TTTCCTTGGTGTTCCATGCAATTGACTACCACTACA...AAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp GTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGTGTTTTCGTTCATTTTaGTCTCCCAAACAGGCAATG +
Preference number: 5 (lower is better)
Translates to: VLVTLSIWNKGLGQSRGQCFRSF*SPKQAM
Trigger: CATTGCCTGTTTGGGAGACAAAAATGAACGAAAACA...CTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp CTGCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGAACTGGGTTTTGACTTaGCTTTCCAAAGTCACCTGT +
Preference number: 5 (lower is better)
Translates to: LLSWSLSASGIRVWGKAENWVLT*LSKVTC
Trigger: ACAGGTGACTTTGGAAAGCAAAGTCAAAACCCAGTT...CTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp GCTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTATCCTAAACTGGGTTTaGACTTTGCTTTCCAAAGTC +
Preference number: 5 (lower is better)
Translates to: AALGCQGVDVQATPQDNAILNWV*TLLSKV
Trigger: GACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGAT...AGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp AAGTATTTGCTTAAATACTACCTATTCTGCCCCCAGCTGCTCCTTGAGGAAAACGGCCTGGGAAGGCGCTaGCTCTTCCTCCACATCAGC +
Preference number: 5 (lower is better)
Translates to: KYLLKYYLFCPQLLLEENGLGRR*LFLHIS
Trigger: GCTGATGTGGAGGAAGAGCAAGCGCCTTCCCAGGCC...GTTTTCCTCAAGGAGCAGCTGGGGGCAGAATAGGTAGTATTTAAGCAAATACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp CCCAGAATGAGCCTATGTGGGATCAATAGGCACGGGGAGAAAGATGGCAGAGAATCACACCTTTCGTTCTaGCCAAGGAGTCTATCGCCT +
Preference number: 5 (lower is better)
Translates to: PRMSLCGINRHGEKDGRESHLSF*PRSLSP
Trigger: AGGCGATAGACTCCTTGGCAAGAACGAAAGGTGTGA...TTCTCTGCCATCTTTCTCCCCGTGCCTATTGATCCCACATAGGCTCATTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp CATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCACCAGCAGGCTGTGGCCATCTTaGTTTCTGAAACAGTCTTAT +
Preference number: 5 (lower is better)
Translates to: HFLKHQTDTSHPPSPSTSRLWPS*FLKQSY
Trigger: ATAAGACTGTTTCAGAAACAAAGATGGCCACAGCCT...GCTGGTGGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp GTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGATCATCAATCTGACTaGAAGCCTTTTACCAGTTAC +
Preference number: 5 (lower is better)
Translates to: VLVTLSIWNKGLGQSRGQDHQSD*KPFTSY
Trigger: GTAACTGGTAAAAGGCTTCAAGTCAGATTGATGATC...CTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp TTGCCAAGGAGTCTATCGCCTCATCCACAACATCTGCTTGCGGGAGAAACAGCACCTGCTTTCCCAATCTaGGGCTGGGGTTTTGACTTT +
Preference number: 5 (lower is better)
Translates to: LPRSLSPHPQHLLAGETAPAFPI*GWGFDF
Trigger: AAAGTCAAAACCCCAGCCCAAGATTGGGAAAGCAGG...TGCTGTTTCTCCCGCAAGCAGATGTTGTGGATGAGGCGATAGACTCCTTGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp CTGCTCTGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTTGCATCCGATATTTTTaGCCCGATCTGAAATACTGC +
Preference number: 5 (lower is better)
Translates to: LLWAVREWMSRQRHRIMLCIRYF*PDLKYC
Trigger: GCAGTATTTCAGATCGGGCAAAAAATATCGGATGCA...AAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCAGAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp TCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGCACCTTTTCCATCTGTaGCTGATGCTTCTTGTAAAT +
Preference number: 5 (lower is better)
Translates to: SWSLSASGIRVWGKAEGRHLFHL*LMLLVN
Trigger: ATTTACAAGAAGCATCAGCAACAGATGGAAAAGGTG...CCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp TGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTTTTGAAACCATGTACCCATCCTaGAAGAAGCCAAAGGTGTTC +
Preference number: 5 (lower is better)
Translates to: WAVREWMSRQRHRIMLFETMYPS*KKPKVF
Trigger: GAACACCTTTGGCTTCTTCAAGGATGGGTACATGGT...TTCAAAAAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp ACCAGAAATAGAGAGTCCTTCCACAAGCCATATTCAGTCGTGCCCTCCTCGGTGACCATGTACCCATCCTaGAAGAAGCCAAAGGTGTTC +
Preference number: 5 (lower is better)
Translates to: TRNRESFHKPYSVVPSSVTMYPS*KKPKVF
Trigger: GAACACCTTTGGCTTCTTCAAGGATGGGTACATGGT...CACCGAGGAGGGCACGACTGAATATGGCTTGTGGAAGGACTCTCTATTTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR CAA 90 bp CCGTCCTTGCTACACTTCCCCACACATGGGGTCACAACTGCATACACCTTAGAGACTGTAAAGGCCTTCTaGGTCATCAGTGCTGATGTT +
Preference number: 5 (lower is better)
Translates to: PSLLHFPTHGVTTAYTLETVKAF*VISADV
Trigger: AACATCAGCACTGATGACCAAGAAGGCCTTTACAGT...CTCTAAGGTGTATGCAGTTGTGACCCCATGTGTGGGGAAGTGTAGCAAGGACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp TCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCAGGGTCCTCAGCTTTTCCATCTGTaGCTGATGCTTCTTGTAAAT +
Preference number: 5 (lower is better)
Translates to: SQTGNGTLPALLLKSQGPQLFHL*LMLLVN
Trigger: ATTTACAAGAAGCATCAGCAACAGATGGAAAAGCTG...AGGACCCTGGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000347136.11
CDS-3UTR CAA 90 bp AATGAGGACACCTCCACGGAGACCCTTCCGAGCAGGGAGGTTTCATCACACCTTAATGGAACAGCGAGTTaGAGGAGAAATGCAATGATC +
Preference number: 5 (lower is better)
Translates to: NEDTSTETLPSREVSSHLNGTAS*RRNAMI
Trigger: GATCATTGCATTTCTCCTCAAACTCGCTGTTCCATT...AAGGTGTGATGAAACCTCCCTGCTCGGAAGGGTCTCCGTGGAGGTGTCCTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp TTTTTGTCTCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCAAGTTAACAGTTTCCTaGGACAGTGCCATCCTCAGG +
Preference number: 5 (lower is better)
Translates to: FLSPKQAMALSPPFFLSPKLTVS*DSAILR
Trigger: CCTGAGGATGGCACTGTCCAAGGAAACTGTTAACTT...GGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGAGACAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp CTGCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGATCCTAAACTGGGTTTaGACTTTGCTTTCCAAAGTC +
Preference number: 5 (lower is better)
Translates to: LLSWSLSASGIRVWGKAEILNWV*TLLSKV
Trigger: GACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGAT...CTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp GGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAGCCCCCAGCTGCTCCTaGAGGAAAACTTTCCATTTC +
Preference number: 5 (lower is better)
Translates to: GILGQVLHPKLGFDFAFQAPSCS*RKTFHF
Trigger: GAAATGGAAAGTTTTCCTCAAGGAGCAGCTGGGGGC...TTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp TCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGGGCAGGATGGGGATGATTTGCTaGGACTTAAGTATTTGCTTA +
Preference number: 5 (lower is better)
Translates to: SWSLSASGIRVWGKAEGRMGMIC*DLSICL
Trigger: TAAGCAAATACTTAAGTCCAAGCAAATCATCCCCAT...CCTGCCCTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp TCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCAGGGTCCTATGTACCTTCTGAGCTaGTCCTACTATTCAGATGAT +
Preference number: 5 (lower is better)
Translates to: SQTGNGTLPALLLKSQGPMYLLS*SYYSDD
Trigger: ATCATCTGAATAGTAGGACAAGCTCAGAAGGTACAT...AGGACCCTGGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp CTGCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGCACCTTTTCCATCTGTaGCTGATGCTTCTTGTAAAT +
Preference number: 5 (lower is better)
Translates to: LLSWSLSASGIRVWGKAEHLFHL*LMLLVN
Trigger: ATTTACAAGAAGCATCAGCAACAGATGGAAAAGGTG...CTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp CAGGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCGATGAAGCCAACCTATaGGCGGTTGCCATAACAACG +
Preference number: 5 (lower is better)
Translates to: QESWGRCYILNWVLTLLSDEANL*AVAITT
Trigger: CGTTGTTATGGCAACCGCCAATAGGTTGGCTTCATC...GGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372406.5
CDS-3UTR CAA 90 bp CCAAAGGCTCCCAGCAGGGGAATGATAAACACACCGCGTCTTAGGTTATTTCCTTCAACCAACAGACACTaGCTCAGATCCTGCCACTTC +
Preference number: 5 (lower is better)
Translates to: PKAPSRGMINTPRLRLFPSTNRH*LRSCHF
Trigger: GAAGTGGCAGGATCTGAGCAAGTGTCTGTTGGTTGA...AGGAAATAACCTAAGACGCGGTGTGTTTATCATTCCCCTGCTGGGAGCCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR CAA 90 bp GACTCAGAAGATTCCATTTTCAGACGTAAGCGCCTGATGGCGGGCCTGACAGAACTTGCCACTGAGTTCTaGAAAGCAGGCTCCAATGAT +
Preference number: 5 (lower is better)
Translates to: DSEDSIFRRKRLMAGLTELATEF*KAGSND
Trigger: ATCATTGGAGCCTGCTTTCAAGAACTCAGTGGCAAG...TTCTGTCAGGCCCGCCATCAGGCGCTTACGTCTGAAAATGGAATCTTCTGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS CCA 90 bp ATTCTTCAAGACAGGCCTCATGCTAGGTCATCAAGGAAAAAGAAGTaGTCTTATTGCTCTTCGGAGCCCACAGCCCAGGAGAAGAGATGG +
Preference number: 5 (lower is better)
Translates to: ILQDRPHARSSRKKK*SYCSSEPTAQEKRW
Trigger: CCATCTCTTCTCCTGGGCTGTGGGCTCCGAAGAGCAATAAGACCACTTCTTTTTCCTTGATGACCTAGCATGAGGCCTGTCTTGAAGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415344.1
CDS-3UTR CAA 90 bp CACTTGGCTTTGGACTCCATCGGTCATCTTTACGCAAGAGCAGAGATGAACGGTAGACTTTCCACCATCTaGTGTCTTCTGGGTCTGGTT +
Preference number: 5 (lower is better)
Translates to: HLALDSIGHLYARAEMNGRLSTI*CLLGLV
Trigger: AACCAGACCCAGAAGACACAAGATGGTGGAAAGTCT...ACCGTTCATCTCTGCTCTTGCGTAAAGATGACCGATGGAGTCCAAAGCCAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp AATAGAGAGTCCTTCCACAAGCCATATTCAGTCGTGCCCTCCTCGGTGGACTCTACTGTAAAGGCCTTCTaGGTCATCAGTGCTGATGTT +
Preference number: 5 (lower is better)
Translates to: NRESFHKPYSVVPSSVDSTVKAF*VISADV
Trigger: AACATCAGCACTGATGACCAAGAAGGCCTTTACAGT...AGAGTCCACCGAGGAGGGCACGACTGAATATGGCTTGTGGAAGGACTCTCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR CAA 90 bp TTTTTGTCTCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCCCGTTGGTCACCTTCTaGACTTTCTTCATACTTTCC +
Preference number: 5 (lower is better)
Translates to: FLSPKQAMALSPPFFLSPPLVTF*TFFILS
Trigger: GGAAAGTATGAAGAAAGTCAAGAAGGTGACCAACGG...GGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGAGACAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp CTGTCCAATAGGACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCGGCTCCACGGAGCCGTaGGTCACCTTCTTGACTTTC +
Preference number: 5 (lower is better)
Translates to: LSNRTMNKLTVSLDSAILGSTEP*VTFLTF
Trigger: GAAAGTCAAGAAGGTGACCAACGGCTCCGTGGAGCC...GAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGTCCTATTGGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp CAGGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAGTTAACAGTTTCCTaGGACAGTGCCATCCTCAGG +
Preference number: 5 (lower is better)
Translates to: QESWGRCYILNWVLTLLSKLTVS*DSAILR
Trigger: CCTGAGGATGGCACTGTCCAAGGAAACTGTTAACTT...GGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp CTGCTGTCCTGGTCACTCTCAGCATCTGGAATAAGGGTCTGGGGCAAAGCCGAGATGGGGATGATTTGCTaGGACTTAAGTATTTGCTTA +
Preference number: 5 (lower is better)
Translates to: LLSWSLSASGIRVWGKAEMGMIC*DLSICL
Trigger: TAAGCAAATACTTAAGTCCAAGCAAATCATCCCCAT...CTCGGCTTTGCCCCAGACCCTTATTCCAGATGCTGAGAGTGACCAGGACAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp CCCAGAATGAGCCTATGTGGGATCAATAGGCACGGGGAGAAAGATGGCAGAGAATTCACATACATACTCTaGGACTATGGGGACCAAGTC +
Preference number: 5 (lower is better)
Translates to: PRMSLCGINRHGEKDGREFTYIL*DYGDQV
Trigger: GACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAA...TTCTCTGCCATCTTTCTCCCCGTGCCTATTGATCCCACATAGGCTCATTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp GGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAACCTGCTTTCCCAATCTaGGGCTGGGGTTTTGACTTT +
Preference number: 5 (lower is better)
Translates to: GILGQVLHPKLGFDFAFQPAFPI*GWGFDF
Trigger: AAAGTCAAAACCCCAGCCCAAGATTGGGAAAGCAGG...TTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp TGTTTCATTCTGACCATTCTGACTCTGCCCAGAACGCCGTCCCACCTGCAGACATGCATCCGATATTTTTaGCCCGATCTGAAATACTGC +
Preference number: 5 (lower is better)
Translates to: CFILTILTLPRTPSHLQTCIRYF*PDLKYC
Trigger: GCAGTATTTCAGATCGGGCAAAAAATATCGGATGCA...TGTCTGCAGGTGGGACGGCGTTCTGGGCAGAGTCAGAATGGTCAGAATGAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp TTTTTGTCTCCCAAACAGGCAATGGCACTCTCCCCGCCCTTCTTCTTAAGTCCCATCTGCAAAAGCTGTTaGAAGAGTCAAAGCCCCCAT +
Preference number: 5 (lower is better)
Translates to: FLSPKQAMALSPPFFLSPICKSC*KSQSPH
Trigger: ATGGGGGCTTTGACTCTTCAAACAGCTTTTGCAGAT...GGGACTTAAGAAGAAGGGCGGGGAGAGTGCCATTGCCTGTTTGGGAGACAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp AATAGAGAGTCCTTCCACAAGCCATATTCAGTCGTGCCCTCCTCGGTGGACTCTAAGACCCAGCTAGGTTaGGCAGATACTGTACTTCAA +
Preference number: 5 (lower is better)
Translates to: NRESFHKPYSVVPSSVDSKTQLG*ADTVLQ
Trigger: TTGAAGTACAGTATCTGCCAAACCTAGCTGGGTCTT...AGAGTCCACCGAGGAGGGCACGACTGAATATGGCTTGTGGAAGGACTCTCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS TCA 90 bp TTAATAGCAGCTATGCGACTTCCTGCTCTTAGATTCGCTCTCTGCTaGAGAGGTCCCATGCTGTCACCTTTTCCATCTGTTGCTGATGCT +
Preference number: 5 (lower is better)
Translates to: LIAAMRLPALRFALC*RGPMLSPFPSVADA
Trigger: AGCATCAGCAACAGATGGAAAAGGTGACAGCATGGGACCTCTTCAGCAGAGAGCGAATCTAAGAGCAGGAAGTCGCATAGCTGCTATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372410.7
CDS-3UTR CAA 90 bp TGCCTCCTACAAGTCACTAGAGTCATATTCAACATTACAAAATGCAGTGCTACTCCAGAGCGGCCATGTTaGTTCCAGCATCACCAGCCG +
Preference number: 5 (lower is better)
Translates to: CLLQVTRVIFNITKCSATPERPC*FQHHQP
Trigger: CGGCTGGTGATGCTGGAACAAACATGGCCGCTCTGG...AGTAGCACTGCATTTTGTAATGTTGAATATGACTCTAGTGACTTGTAGGAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp GAGTCCTTCCACAAGCCATATTCAGTCGTGCCCTCCTCGGTGGACTCTATGATGCAGCTTTTCCATCTGTaGCTGATGCTTCTTGTAAAT +
Preference number: 5 (lower is better)
Translates to: ESFHKPYSVVPSSVDSMMQLFHL*LMLLVN
Trigger: ATTTACAAGAAGCATCAGCAACAGATGGAAAAGCTG...CATCATAGAGTCCACCGAGGAGGGCACGACTGAATATGGCTTGTGGAAGGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR CAA 90 bp GACTCAGAAGATTCCATTTTCAGACGTAAGCGCCTGATGGCGGGCCTGACAGAAAATGGAACAGCGAGTTaGAGGAGAAATGCAATGATC +
Preference number: 5 (lower is better)
Translates to: DSEDSIFRRKRLMAGLTENGTAS*RRNAMI
Trigger: GATCATTGCATTTCTCCTCAAACTCGCTGTTCCATT...TTCTGTCAGGCCCGCCATCAGGCGCTTACGTCTGAAAATGGAATCTTCTGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR CAA 90 bp TTGCCAAGGAGTCTATCGCCTCATCCACAACATCTGCTTGCGGGAGAAACAGCAAACTGGGTTTTGACTTaGCTTTCCAAAGTCACCTGT +
Preference number: 5 (lower is better)
Translates to: LPRSLSPHPQHLLAGETANWVLT*LSKVTC
Trigger: ACAGGTGACTTTGGAAAGCAAAGTCAAAACCCAGTT...TGCTGTTTCTCCCGCAAGCAGATGTTGTGGATGAGGCGATAGACTCCTTGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp AGTAGACATTTCCTAAAGCATCAGACAGACACCTCGCACCCTCCTTCCCCCTCCGATCATCAATCTGACTaGAAGCCTTTTACCAGTTAC +
Preference number: 5 (lower is better)
Translates to: SRHFLKHQTDTSHPPSPSDHQSD*KPFTSY
Trigger: GTAACTGGTAAAAGGCTTCAAGTCAGATTGATGATC...GGAGGGGGAAGGAGGGTGCGAGGTGTCTGTCTGATGCTTTAGGAAATGTCTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp CAGGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCATCTGCAAAAGCTGTTaGAAGAGTCAAAGCCCCCAT +
Preference number: 5 (lower is better)
Translates to: QESWGRCYILNWVLTLLSICKSC*KSQSPH
Trigger: ATGGGGGCTTTGACTCTTCAAACAGCTTTTGCAGAT...GGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp CCGTCCTTGCTACACTTCCCCACACATGGGGTCACAACTGCATACACCTTAGAGCACCTTTTCCATCTGTaGCTGATGCTTCTTGTAAAT +
Preference number: 5 (lower is better)
Translates to: PSLLHFPTHGVTTAYTLEHLFHL*LMLLVN
Trigger: ATTTACAAGAAGCATCAGCAACAGATGGAAAAGGTG...CTCTAAGGTGTATGCAGTTGTGACCCCATGTGTGGGGAAGTGTAGCAAGGACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp ACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCAGGGTCGGCTCTACCATGTACCCATCCTaGAAGAAGCCAAAGGTGTTC +
Preference number: 5 (lower is better)
Translates to: TMNKLTVSLDSAILRVGSTMYPS*KKPKVF
Trigger: GAACACCTTTGGCTTCTTCAAGGATGGGTACATGGT...AGAGCCGACCCTGAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp TCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCTCTCTCCCATGGCCTTaGAATCCACTGTACTTCTTT +
Preference number: 5 (lower is better)
Translates to: SWGRCYILNWVLTLLSKVSLPWP*NPLYFF
Trigger: AAAGAAGTACAGTGGATTCAAAGGCCATGGGAGAGA...GACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp GGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAATCTCTCCCATGGCCTTaGAATCCACTGTACTTCTTT +
Preference number: 5 (lower is better)
Translates to: GILGQVLHPKLGFDFAFQSLPWP*NPLYFF
Trigger: AAAGAAGTACAGTGGATTCAAAGGCCATGGGAGAGA...TTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp CAGGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCTGTAGTGGTAGTCAATaGCATGGAACACCAAGGAAA +
Preference number: 5 (lower is better)
Translates to: QESWGRCYILNWVLTLLSCSGSQ*HGTPRK
Trigger: TTTCCTTGGTGTTCCATGCAATTGACTACCACTACA...GGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp CTTCATAATGCATCCAGGCTCCAAGATGTAACGGCTGAGGGAAAGGATGTGGGATGTAGTGGTAGTCAATaGCATGGAACACCAAGGAAA +
Preference number: 5 (lower is better)
Translates to: LHNASRLQDVTAEGKDVGCSGSQ*HGTPRK
Trigger: TTTCCTTGGTGTTCCATGCAATTGACTACCACTACA...TCCCACATCCTTTCCCTCAGCCGTTACATCTTGGAGCCTGGATGCATTATGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR CAA 90 bp GAGGGCTTTGGTAGTCACAGATTGAGACACATTTCTGCGAAAACTGGTATTATGGCCCCCAGCTGCTCCTaGAGGAAAACTTTCCATTTC +
Preference number: 5 (lower is better)
Translates to: EGFGSHRLRHISAKTGIMAPSCS*RKTFHF
Trigger: GAAATGGAAAGTTTTCCTCAAGGAGCAGCTGGGGGC...CATAATACCAGTTTTCGCAGAAATGTGTCTCAATCTGTGACTACCAAAGCCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp CCCAGAATGAGCCTATGTGGGATCAATAGGCACGGGGAGAAAGATGGCAGAGAAATGTACCTTCTGAGCTaGTCCTACTATTCAGATGAT +
Preference number: 5 (lower is better)
Translates to: PRMSLCGINRHGEKDGREMYLLS*SYYSDD
Trigger: ATCATCTGAATAGTAGGACAAGCTCAGAAGGTACAT...TTCTCTGCCATCTTTCTCCCCGTGCCTATTGATCCCACATAGGCTCATTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp ACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCAGGGTCGGCTCTAAGACACACGGATGCTaGCCTAAAATATCTGCCGAG +
Preference number: 5 (lower is better)
Translates to: TMNKLTVSLDSAILRVGSKTHGC*PKISAE
Trigger: CTCGGCAGATATTTTAGGCAAGCATCCGTGTGTCTT...AGAGCCGACCCTGAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp TGGGCTGTCAGGGAGTGGATGTCCAGGCAACGCCACAGGATAATGCTTTTTGAAGATCATCAATCTGACTaGAAGCCTTTTACCAGTTAC +
Preference number: 5 (lower is better)
Translates to: WAVREWMSRQRHRIMLFEDHQSD*KPFTSY
Trigger: GTAACTGGTAAAAGGCTTCAAGTCAGATTGATGATC...TTCAAAAAGCATTATCCTGTGGCGTTGCCTGGACATCCACTCCCTGACAGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp GGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAACTAGATCTGTTTCCTTaGAAGTACAGCAGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: GILGQVLHPKLGFDFAFQLDLFP*KYSSLA
Trigger: TGCCAAGCTGCTGTACTTCAAAGGAAACAGATCTAG...TTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp CAGGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCTGTTTTCGTTCATTTTaGTCTCCCAAACAGGCAATG +
Preference number: 5 (lower is better)
Translates to: QESWGRCYILNWVLTLLSCFRSF*SPKQAM
Trigger: CATTGCCTGTTTGGGAGACAAAAATGAACGAAAACA...GGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp GGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAACTGGGTTTTGACTTaGCTTTCCAAAGTCACCTGT +
Preference number: 5 (lower is better)
Translates to: GILGQVLHPKLGFDFAFQNWVLT*LSKVTC
Trigger: ACAGGTGACTTTGGAAAGCAAAGTCAAAACCCAGTT...TTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp CAGGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCATCCTAAACTGGGTTTaGACTTTGCTTTCCAAAGTC +
Preference number: 5 (lower is better)
Translates to: QESWGRCYILNWVLTLLSILNWV*TLLSKV
Trigger: GACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGAT...GGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp TGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCACCTGTTTTCGTGCCCCCAGCTGCTCCTaGAGGAAAACTTTCCATTTC +
Preference number: 5 (lower is better)
Translates to: CYILNWVLTLLSKVTCFRAPSCS*RKTFHF
Trigger: GAAATGGAAAGTTTTCCTCAAGGAGCAGCTGGGGGC...ACGAAAACAGGTGACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp CATGCTCACTTTCTTCACATACATACTCTTGGACTATGGGGACCAAGTCTGTTGATCCACAACATCTGCTaGCGGGAGAAACAGCAAATG +
Preference number: 5 (lower is better)
Translates to: HAHFLHIHTLGLWGPSLLIHNIC*REKQQM
Trigger: CATTTGCTGTTTCTCCCGCAAGCAGATGTTGTGGAT...CAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGAGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp TCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCAGGCTGTGGCCATCTTaGTTTCTGAAACAGTCTTAT +
Preference number: 5 (lower is better)
Translates to: SWGRCYILNWVLTLLSKVRLWPS*FLKQSY
Trigger: ATAAGACTGTTTCAGAAACAAAGATGGCCACAGCCT...GACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp GGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGGCTGTGGCCATCTTaGTTTCTGAAACAGTCTTAT +
Preference number: 5 (lower is better)
Translates to: GILGQVLHPKLGFDFAFQRLWPS*FLKQSY
Trigger: ATAAGACTGTTTCAGAAACAAAGATGGCCACAGCCT...TTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp GGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAATCTTGGGCTGGGGTTTaGACTTTTCTTGATCATCAA +
Preference number: 5 (lower is better)
Translates to: GILGQVLHPKLGFDFAFQSWAGV*TFLDHQ
Trigger: TTGATGATCAAGAAAAGTCAAAACCCCAGCCCAAGA...TTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp AAGTATTTGCTTAAATACTACCTATTCTGCCCCCAGCTGCTCCTTGAGGAAAACAGACTTTCCACCATCTaGTGTCTTCTGGGTCTGGTT +
Preference number: 5 (lower is better)
Translates to: KYLLKYYLFCPQLLLEENRLSTI*CLLGLV
Trigger: AACCAGACCCAGAAGACACAAGATGGTGGAAAGTCT...GTTTTCCTCAAGGAGCAGCTGGGGGCAGAATAGGTAGTATTTAAGCAAATACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp TCATTAGCAGACTTAGAGATGACTCAGAAGATTCCATTTTCAGACGTAAGCGCCAGACTTTCCACCATCTaGTGTCTTCTGGGTCTGGTT +
Preference number: 5 (lower is better)
Translates to: SLADLEMTQKIPFSDVSARLSTI*CLLGLV
Trigger: AACCAGACCCAGAAGACACAAGATGGTGGAAAGTCT...GGCGCTTACGTCTGAAAATGGAATCTTCTGAGTCATCTCTAAGTCTGCTAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR CAA 90 bp ACTATGAATAAGTTAACAGTTTCCTTGGACAGTGCCATCCTCAGGGTCGGCTCTAATGGAACAGCGAGTTaGAGGAGAAATGCAATGATC +
Preference number: 5 (lower is better)
Translates to: TMNKLTVSLDSAILRVGSNGTAS*RRNAMI
Trigger: GATCATTGCATTTCTCCTCAAACTCGCTGTTCCATT...AGAGCCGACCCTGAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp TGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCACCTGTTTTCGTCCATCACCCCAGATGTaGTCACAACGGACTCCATTT +
Preference number: 5 (lower is better)
Translates to: CYILNWVLTLLSKVTCFRPSPQM*SQRTPF
Trigger: AAATGGAGTCCGTTGTGACAACATCTGGGGTGATGG...ACGAAAACAGGTGACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp CAGGAATCCTGGGGCAGGTGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCATGGGGATGATTTGCTaGGACTTAAGTATTTGCTTA +
Preference number: 5 (lower is better)
Translates to: QESWGRCYILNWVLTLLSMGMIC*DLSICL
Trigger: TAAGCAAATACTTAAGTCCAAGCAAATCATCCCCAT...GGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCACCTGCCCCAGGATTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp CTGAAAACTCCTTCTGCATCCCAATCTCTAACCAGGAAAGCAAATGCTATTTACTCACACCTTTCGTTCTaGCCAAGGAGTCTATCGCCT +
Preference number: 5 (lower is better)
Translates to: LKTPSASQSLTRKANAIYSHLSF*PRSLSP
Trigger: AGGCGATAGACTCCTTGGCAAGAACGAAAGGTGTGA...GTAAATAGCATTTGCTTTCCTGGTTAGAGATTGGGATGCAGAAGGAGTTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp TCACTTTCTTCACATACATACTCTTGGACTATGGGGACCAAGTCTGTTGAATTCTCGCTATGCTCTTCCTaGGTCTGTAAGGACTGGATG +
Preference number: 5 (lower is better)
Translates to: SLSSHTYSWTMGTKSVEFSLCSS*VCKDWM
Trigger: CATCCAGTCCTTACAGACCAAGGAAGAGCATAGCGA...GAATTCAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp AAGTATTTGCTTAAATACTACCTATTCTGCCCCCAGCTGCTCCTTGAGGAAAACTCTCTCCCATGGCCTTaGAATCCACTGTACTTCTTT +
Preference number: 5 (lower is better)
Translates to: KYLLKYYLFCPQLLLEENSLPWP*NPLYFF
Trigger: AAAGAAGTACAGTGGATTCAAAGGCCATGGGAGAGA...GTTTTCCTCAAGGAGCAGCTGGGGGCAGAATAGGTAGTATTTAAGCAAATACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp AAGTATTTGCTTAAATACTACCTATTCTGCCCCCAGCTGCTCCTTGAGGAAAACTTCACATACATACTCTaGGACTATGGGGACCAAGTC +
Preference number: 5 (lower is better)
Translates to: KYLLKYYLFCPQLLLEENFTYIL*DYGDQV
Trigger: GACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAA...GTTTTCCTCAAGGAGCAGCTGGGGGCAGAATAGGTAGTATTTAAGCAAATACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp AGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTGTTGAACCATCACCCCAGATGTaGTCACAACGGACTCCATTT +
Preference number: 5 (lower is better)
Translates to: SFCEVFCHPKIPESETVEPSPQM*SQRTPF
Trigger: AAATGGAGTCCGTTGTGACAACATCTGGGGTGATGG...TTCAACAGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp TCACTTTCTTCACATACATACTCTTGGACTATGGGGACCAAGTCTGTTGAATTCCCGTTGGTCACCTTCTaGACTTTCTTCATACTTTCC +
Preference number: 5 (lower is better)
Translates to: SLSSHTYSWTMGTKSVEFPLVTF*TFFILS
Trigger: GGAAAGTATGAAGAAAGTCAAGAAGGTGACCAACGG...GAATTCAACAGACTTGGTCCCCATAGTCCAAGAGTATGTATGTGAAGAAAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp CTTCTTCCTGAGAAAGTTGTAGGTAGGGGTTATCTGAAGCCGGACGGAATTTATTCATCAAACACAGCATaGACCTGGCTTATCAAATTT +
Preference number: 5 (lower is better)
Translates to: LLPEKVVGRGYLKPDGIYSSNTA*TWLIKF
Trigger: AAATTTGATAAGCCAGGTCAATGCTGTGTTTGATGA...ATAAATTCCGTCCGGCTTCAGATAACCCCTACCTACAACTTTCTCAGGAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493417.5
CDS-3UTR CAA 90 bp TGCTACATCCTAAACTGGGTTTTGACTTTGCTTTCCAAAGTCACCTGTTTTCGTTGTTTTCGTTCATTTTaGTCTCCCAAACAGGCAATG +
Preference number: 5 (lower is better)
Translates to: CYILNWVLTLLSKVTCFRCFRSF*SPKQAM
Trigger: CATTGCCTGTTTGGGAGACAAAAATGAACGAAAACA...ACGAAAACAGGTGACTTTGGAAAGCAAAGTCAAAACCCAGTTTAGGATGTAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS-3UTR CAA 90 bp TCATTGAGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTAATGGAACAGCGAGTTaGAGGAGAAATGCAATGATC +
Preference number: 5 (lower is better)
Translates to: SLSFCEVFCHPKIPESETNGTAS*RRNAMI
Trigger: GATCATTGCATTTCTCCTCAAACTCGCTGTTCCATT...AGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACTCAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp AGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTGTTGAATGCATCCGATATTTTTaGCCCGATCTGAAATACTGC +
Preference number: 5 (lower is better)
Translates to: SFCEVFCHPKIPESETVECIRYF*PDLKYC
Trigger: GCAGTATTTCAGATCGGGCAAAAAATATCGGATGCA...TTCAACAGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS-3UTR CAA 90 bp TCATTGAGTTTCTGTGAAGTATTTTGCCATCCTAAAATCCCTGAGAGTGAAACTATGGGGATGATTTGCTaGGACTTAAGTATTTGCTTA +
Preference number: 5 (lower is better)
Translates to: SLSFCEVFCHPKIPESETMGMIC*DLSICL
Trigger: TAAGCAAATACTTAAGTCCAAGCAAATCATCCCCAT...AGTTTCACTCTCAGGGATTTTAGGATGGCAAAATACTTCACAGAAACTCAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
CDS CAA 90 bp GACCGCGGGAGGCGGGGGAGCCGACGGGCGCCAGAGCGGCCATGTTaGTTCCAGCATCACCAGCCGCTTCCTCTCCCGCCCACGTCCGGG +
Preference number: 6 (lower is better)
Translates to: DRGRRGSRRAPERPC*FQHHQPLPLPPTSG
Trigger: CCCGGACGTGGGCGGGAGAGGAAGCGGCTGGTGATGCTGGAACAAACATGGCCGCTCTGGCGCCCGTCGGCTCCCCCGCCTCCCGCGGTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372406.5
ENST00000372410.7
CDS CCA 72 bp GCCAGGCTCGGCCAGCAACTGCAGCAAACCCAGCATTaGGAGCAGCCGGAGGCCCGCGGCCAGCCTAGGACC +
Preference number: 6 (lower is better)
Translates to: ARLGQQLQQTQH*EQPEARGQPRT
Trigger: GGTCCTAGGCTGGCCGCGGGCCTCCGGCTGCTCCCAATGCTGGGTTTGCTGCAGTTGCTGGCCGAGCCTGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000493417.5
ENST00000610997.1
CDS GCA 72 bp TGGAGATTGCGACCTAGGAAGTCGTCGAGGAGCCTGTaGTGCCCACCTCGGGGCCCTTCGATCGGCCGCTCC +
Preference number: 6 (lower is better)
Translates to: WRLRPRKSSRSL*CPPRGPSIGRS
Trigger: GGAGCGGCCGATCGAAGGGCCCCGAGGTGGGCAGCACAGGCTCCTCGACGACTTCCTAGGTCGCAATCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372406.5
ENST00000372410.7
CDS CCA 72 bp GGTCGGCTCTGTCACACGGCGCCTTCCCACTCGCCCTaGGGCTCCACGGAGCCGTTGGTCACCTTCTTGACT +
Preference number: 6 (lower is better)
Translates to: GRLCHTAPSHSP*GSTEPLVTFLT
Trigger: AGTCAAGAAGGTGACCAACGGCTCCGTGGAGCCCCAGGGCGAGTGGGAAGGCGCCGTGTGACAGAGCCGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS TCA 72 bp GGAGTGCTGGGAACCGGGTTCGGTGATGGCTCGGGCTaGGAAGAATCCCTCTGCCGGGGAATCGGGGAAGCC +
Preference number: 6 (lower is better)
Translates to: GVLGTGFGDGSG*EESLCRGIGEA
Trigger: GGCTTCCCCGATTCCCCGGCAGAGGGATTCTTCTCAGCCCGAGCCATCACCGAACCCGGTTCCCAGCACTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415344.1
CDS CCA 72 bp GGGAGCGGGGCTCGGCGGCTAGCTCCGCTGACCCTGTaGTCGTTTTCCTGGAGATTGCGACCTAGGAAGTCG +
Preference number: 6 (lower is better)
Translates to: GSGARRLAPLTL*SFSWRLRPRKS
Trigger: CGACTTCCTAGGTCGCAATCTCCAGGAAAACGACCACAGGGTCAGCGGAGCTAGCCGCCGAGCCCCGCTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372406.5
ENST00000372410.7
CDS CAA 90 bp GCTCGGCGGCTAGCTCCGCTGACCCTGTGGTCGTTTTCCTGGAGATaGCGACCTAGGAAGTCGTCGAGGAGCCTGTGCTGCCCACCTCGG +
Preference number: 6 (lower is better)
Translates to: ARRLAPLTLWSFSWR*RPRKSSRSLCCPPR
Trigger: CCGAGGTGGGCAGCACAGGCTCCTCGACGACTTCCTAGGTCGCAATCTCCAGGAAAACGACCACAGGGTCAGCGGAGCTAGCCGCCGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372406.5
ENST00000372410.7
CDS CAA 72 bp CTAGCTCCGCTGACCCTGTGGTCGTTTTCCTGGAGATaGCGACCTAGGAAGTCGTCGAGGAGCCTGTGCTGC +
Preference number: 6 (lower is better)
Translates to: LAPLTLWSFSWR*RPRKSSRSLCC
Trigger: GCAGCACAGGCTCCTCGACGACTTCCTAGGTCGCAATCTCCAGGAAAACGACCACAGGGTCAGCGGAGCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372406.5
ENST00000372410.7
CDS CAA 90 bp CGGCCGCTCCTGTGCAGACTTTCAGTTAGAGATGAAGCCAACCTATaGGCGGTTGCCATAACAACGGTGGCCGAACCAGACCAGCCCGGG +
Preference number: 6 (lower is better)
Translates to: RPLLCRLSVRDEANL*AVAITTVAEPDQPG
Trigger: CCCGGGCTGGTCTGGTTCGGCCACCGTTGTTATGGCAACCGCCAATAGGTTGGCTTCATCTCTAACTGAAAGTCTGCACAGGAGCGGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372406.5
CDS CAA 90 bp TGTCACACGGCGCCTTCCCACTCGCCCTGGGGCTCCACGGAGCCGTaGGTCACCTTCTTGACTTTCTTCATACTTTCCATCACCCCAGAT +
Preference number: 6 (lower is better)
Translates to: CHTAPSHSPWGSTEP*VTFLTFFILSITPD
Trigger: ATCTGGGGTGATGGAAAGTATGAAGAAAGTCAAGAAGGTGACCAACGGCTCCGTGGAGCCCCAGGGCGAGTGGGAAGGCGCCGTGTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS GCA 72 bp CTGCCCACCTCGGGGCCCTTCGATCGGCCGCTCCTGTaGAGACTTTCAGTTAGAGATGAAGCCAACCTATTG +
Preference number: 6 (lower is better)
Translates to: LPTSGPFDRPLL*RLSVRDEANLL
Trigger: CAATAGGTTGGCTTCATCTCTAACTGAAAGTCTGCACAGGAGCGGCCGATCGAAGGGCCCCGAGGTGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372406.5
CDS CAA 72 bp GCGCCTTCCCACTCGCCCTGGGGCTCCACGGAGCCGTaGGTCACCTTCTTGACTTTCTTCATACTTTCCATC +
Preference number: 6 (lower is better)
Translates to: APSHSPWGSTEP*VTFLTFFILSI
Trigger: GATGGAAAGTATGAAGAAAGTCAAGAAGGTGACCAACGGCTCCGTGGAGCCCCAGGGCGAGTGGGAAGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS CAA 90 bp CCTTCCCACTCGCCCTGGGGCTCCACGGAGCCGTTGGTCACCTTCTaGACTTTCTTCATACTTTCCATCACCCCAGATGTTGTCACAACG +
Preference number: 6 (lower is better)
Translates to: PSHSPWGSTEPLVTF*TFFILSITPDVVTT
Trigger: CGTTGTGACAACATCTGGGGTGATGGAAAGTATGAAGAAAGTCAAGAAGGTGACCAACGGCTCCGTGGAGCCCCAGGGCGAGTGGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS CCA 72 bp GACAGGCCTCATGCTAGGTCATCAAGGAAAAAGAAGTaGTCTTATTGCTCTTCGGAGCCCACAGCCCAGGAG +
Preference number: 6 (lower is better)
Translates to: DRPHARSSRKKK*SYCSSEPTAQE
Trigger: CTCCTGGGCTGTGGGCTCCGAAGAGCAATAAGACCACTTCTTTTTCCTTGATGACCTAGCATGAGGCCTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415344.1
CDS CAA 90 bp CTGCTCCTGCTGTCCAATAGGACTATGAATAAGTTAACAGTTTCCTaGGACAGTGCCATCCTCAGGGTCGGCTCTGTCACACGGCGCCTT +
Preference number: 6 (lower is better)
Translates to: LLLLSNRTMNKLTVS*DSAILRVGSVTRRL
Trigger: AAGGCGCCGTGTGACAGAGCCGACCCTGAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGTCCTATTGGACAGCAGGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1
CDS TCA 72 bp GCTATGCGACTTCCTGCTCTTAGATTCGCTCTCTGCTaGAGAGGTCCCATGCTGTCACCTTTTCCATCTGTT +
Preference number: 6 (lower is better)
Translates to: AMRLPALRFALC*RGPMLSPFPSV
Trigger: AACAGATGGAAAAGGTGACAGCATGGGACCTCTTCAGCAGAGAGCGAATCTAAGAGCAGGAAGTCGCATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372410.7
ENST00000483935.1
CDS GCA 72 bp CATGCTAGGTCATCAAGGAAAAAGAAGTGGTCTTATTaGTCTTCGGAGCCCACAGCCCAGGAGAAGAGATGG +
Preference number: 6 (lower is better)
Translates to: HARSSRKKKWSY*SSEPTAQEKRW
Trigger: CCATCTCTTCTCCTGGGCTGTGGGCTCCGAAGAGCAATAAGACCACTTCTTTTTCCTTGATGACCTAGCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415344.1
CDS TCA 72 bp TCTATGCGACTTCCTGCTCTTAGATTCGCTCTCTGCTaGAGAGGTCCCATGCTGTCACCTTTTCCATCTGTT +
Preference number: 6 (lower is better)
Translates to: SMRLPALRFALC*RGPMLSPFPSV
Trigger: AACAGATGGAAAAGGTGACAGCATGGGACCTCTTCAGCAGAGAGCGAATCTAAGAGCAGGAAGTCGCATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372406.5
ENST00000610997.1
CDS TCA 72 bp TCCAATAGTCACATCCTTGTCTTCAGGCTCATTCAGTaGGAGGCTACTGACATTCACCACCATGTACCCATC +
Preference number: 6 (lower is better)
Translates to: SNSHILVFRLIQ*EATDIHHHVPI
Trigger: GATGGGTACATGGTGGTGAATGTCAGTAGCCTCTCACTGAATGAGCCTGAAGACAAGGATGTGACTATTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000493417.5
ENST00000610997.1
CDS CAA 72 bp CTGTCCAATAGGACTATGAATAAGTTAACAGTTTCCTaGGACAGTGCCATCCTCAGGGTCGGCTCTGTCACA +
Preference number: 6 (lower is better)
Translates to: LSNRTMNKLTVS*DSAILRVGSVT
Trigger: TGTGACAGAGCCGACCCTGAGGATGGCACTGTCCAAGGAAACTGTTAACTTATTCATAGTCCTATTGGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347136.11
ENST00000372406.5
ENST00000372410.7
ENST00000610997.1