RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPNMB (Homo sapiens)

Ensembl gene IDs: ENSG00000136235

Ensembl transcript IDs: ENST00000258733.9, ENST00000381990.6, ENST00000409458.3, ENST00000459927.5, ENST00000463011.5, ENST00000465673.5, ENST00000468723.1, ENST00000470994.1, ENST00000474157.1, ENST00000478451.1, ENST00000479625.1, ENST00000487890.5, ENST00000492512.1, ENST00000492858.6, ENST00000647578.1

Found 392 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGTGTGTATTaGAGTGGGATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGA +
Preference number: 1 (lower is better)
Translates to: GLGLLLFHQEFMSVY*SGIQLAWNMILETG
Trigger: TCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAATAACAGGCCCAAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
3UTR CCA 90 bp GGGCCTGTTATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTaGGATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACA +
Preference number: 1 (lower is better)
Translates to: GPVIVPSGVHECVLK*DSVSLEHDLRNWTT
Trigger: TGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAATAACAGGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
3UTR CCA 90 bp ATCCTTACTGATCAAGTTGCCATGAAAAACCAGGGACCTCATCTTTaGAAAGTCTTAATATATGATTTCAAATATGTGCAGCGACTGTAC +
Preference number: 1 (lower is better)
Translates to: ILTDQVAMKNQGPHL*KVLIYDFKYVQRLY
Trigger: GTACAGTCGCTGCACATATTTGAAATCATATATTAAGACTTTCCAAAGATGAGGTCCCTGGTTTTTCATGGCAACTTGATCAGTAAGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
3UTR-3UTR GCA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGATGGCTGAAGCTGCCTaGAGTATAATCCCTCTCCCC +
Preference number: 2 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMMAEAA*SIIPLP
Trigger: GGGGAGAGGGATTATACTGCAGGCAGCTTCAGCCAT...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
3UTR-3UTR TCA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGTCACATCAATGGCACTaGAAAGTGAGCTTCAGAAAC +
Preference number: 2 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMSHQWH*KVSFRN
Trigger: GTTTCTGAAGCTCACTTTTCAGTGCCATTGATGTGA...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
3UTR-3UTR TCA 90 bp ACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGTGTGTTTCACAACATGGCTaGAGCTGCCTGCAGTATAAT +
Preference number: 2 (lower is better)
Translates to: TSYHRLGPVIVPSGVHECVSQHG*SCLQYN
Trigger: ATTATACTGCAGGCAGCTTCAGCCATGTTGTGAAAC...ACACTCATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
3UTR-3UTR CCA 90 bp ACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGTGTATCAGTTTCACAACATaGCTGAAGCTGCCTGCAGTA +
Preference number: 2 (lower is better)
Translates to: TSYHRLGPVIVPSGVHECISFTT*LKLPAV
Trigger: TACTGCAGGCAGCTTCAGCCATGTTGTGAAACTGAT...ACACTCATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
3UTR-3UTR CCA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTATCAGTTTCACAACATaGCTGAAGCTGCCTGCAGTA +
Preference number: 2 (lower is better)
Translates to: FLSLASVHIIPQAWACYCISFTT*LKLPAV
Trigger: TACTGCAGGCAGCTTCAGCCATGTTGTGAAACTGAT...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
3UTR-3UTR TCA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCACATCAATGGCACTaGAAAGTGAGCTTCAGAAAC +
Preference number: 2 (lower is better)
Translates to: FLSLASVHIIPQAWACYCSHQWH*KVSFRN
Trigger: GTTTCTGAAGCTCACTTTTCAGTGCCATTGATGTGA...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
3UTR CAA 90 bp AGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGTGTGTATaGAAGTGGGATTCAGTTAGCTTGGAACATGATCTTAGAAACTGG +
Preference number: 2 (lower is better)
Translates to: RLGPVIVPSGVHECV*KWDSVSLEHDLRNW
Trigger: CCAGTTTCTAAGATCATGTTCCAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAATAACAGGCCCAAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
3UTR-3UTR GCA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCAATGGCTGAAGCTGCCTaGAGTATAATCCCTCTCCCC +
Preference number: 2 (lower is better)
Translates to: IQLAWNMILETGLHWLYAMAEAA*SIIPLP
Trigger: GGGGAGAGGGATTATACTGCAGGCAGCTTCAGCCAT...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
3UTR-3UTR GCA 90 bp TCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCATAATGGCTGAAGCTGCCTaGAGTATAATCCCTCTCCCC +
Preference number: 2 (lower is better)
Translates to: SVSLEHDLRNWTTLALCIMAEAA*SIIPLP
Trigger: GGGGAGAGGGATTATACTGCAGGCAGCTTCAGCCAT...TATGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
3UTR-3UTR TCA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGGTTTCACAACATGGCTaGAGCTGCCTGCAGTATAAT +
Preference number: 2 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLVSQHG*SCLQYN
Trigger: ATTATACTGCAGGCAGCTTCAGCCATGTTGTGAAAC...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
3UTR-3UTR CCA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTGAAACTGGACTACATTaGCTTTATGCATACAGTTAC +
Preference number: 2 (lower is better)
Translates to: FLSLASVHIIPQAWACYCETGLH*LYAYSY
Trigger: GTAACTGTATGCATAAAGCCAATGTAGTCCAGTTTC...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
3UTR-3UTR CCA 90 bp ACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGTGTCATGATCTTAGAAACTaGACTACATTGGCTTTATGC +
Preference number: 2 (lower is better)
Translates to: TSYHRLGPVIVPSGVHECHDLRN*TTLALC
Trigger: GCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATG...ACACTCATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
3UTR-3UTR CCA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTGGGATTCAGTTAGCTTaGAACATGATCTTAGAAACT +
Preference number: 2 (lower is better)
Translates to: FLSLASVHIIPQAWACYCGIQLA*NMILET
Trigger: AGTTTCTAAGATCATGTTCCAAGCTAACTGAATCCC...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
3UTR-3UTR TCA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCAAGTTACATGGAAAGCTaGAAGTATCCCGCCTCTTCT +
Preference number: 2 (lower is better)
Translates to: IQLAWNMILETGLHWLYASYMES*KYPASS
Trigger: AGAAGAGGCGGGATACTTTCAGCTTTCCATGTAACT...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
3UTR-3UTR CCA 90 bp TCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCATAATCAGTTTCACAACATaGCTGAAGCTGCCTGCAGTA +
Preference number: 2 (lower is better)
Translates to: SVSLEHDLRNWTTLALCIISFTT*LKLPAV
Trigger: TACTGCAGGCAGCTTCAGCCATGTTGTGAAACTGAT...TATGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
3UTR-3UTR CCA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGGAAACTGGACTACATTaGCTTTATGCATACAGTTAC +
Preference number: 2 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLETGLH*LYAYSY
Trigger: GTAACTGTATGCATAAAGCCAATGTAGTCCAGTTTC...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
3UTR-3UTR CCA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGCATGATCTTAGAAACTaGACTACATTGGCTTTATGC +
Preference number: 2 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLHDLRN*TTLALC
Trigger: GCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATG...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
3UTR-3UTR CAA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTGTATCCCGCCTCTTCTaGCAGTTAACCTGGGTTAGG +
Preference number: 3 (lower is better)
Translates to: FLSLASVHIIPQAWACYCVSRLF*QLTWVR
Trigger: CCTAACCCAGGTTAACTGCAAGAAGAGGCGGGATAC...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
3UTR-3UTR CAA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGGTATCCCGCCTCTTCTaGCAGTTAACCTGGGTTAGG +
Preference number: 3 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLVSRLF*QLTWVR
Trigger: CCTAACCCAGGTTAACTGCAAGAAGAGGCGGGATAC...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
3UTR TCA 72 bp CTTGCTAAGTTGCTTTTATCAGTTTCACAACATGGCTaGAGCTGCCTGCAGTATAATCCCTCTCCCCATCTC +
Preference number: 3 (lower is better)
Translates to: LAKLLLSVSQHG*SCLQYNPSPHL
Trigger: GAGATGGGGAGAGGGATTATACTGCAGGCAGCTTCAGCCATGTTGTGAAACTGATAAAAGCAACTTAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
3UTR-3UTR CAA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGTGGGATTCAGTTAGCTaGGAACATGATCTTAGAAAC +
Preference number: 3 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMWDSVS*EHDLRN
Trigger: GTTTCTAAGATCATGTTCCAAGCTAACTGAATCCCA...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
3UTR-3UTR CAA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTGTTCATGAGTGTGTATaGAAGTGGGATTCAGTTAGC +
Preference number: 3 (lower is better)
Translates to: FLSLASVHIIPQAWACYCVHECV*KWDSVS
Trigger: GCTAACTGAATCCCACTTCAATACACACTCATGAAC...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
3UTR-3UTR CAA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCAGTATCCCGCCTCTTCTaGCAGTTAACCTGGGTTAGG +
Preference number: 3 (lower is better)
Translates to: IQLAWNMILETGLHWLYAVSRLF*QLTWVR
Trigger: CCTAACCCAGGTTAACTGCAAGAAGAGGCGGGATAC...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
3UTR-3UTR CAA 90 bp ACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGTGTAGAAGCCTTGCTAAGTaGCTTTTATCAGTTTCACAA +
Preference number: 3 (lower is better)
Translates to: TSYHRLGPVIVPSGVHECRSLAK*LLSVSQ
Trigger: TTGTGAAACTGATAAAAGCAACTTAGCAAGGCTTCT...ACACTCATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
3UTR-3UTR CAA 90 bp ACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGTGTAGAAACTGGACTACATaGGCTTTATGCATACAGTTA +
Preference number: 3 (lower is better)
Translates to: TSYHRLGPVIVPSGVHECRNWTT*ALCIQL
Trigger: TAACTGTATGCATAAAGCCAATGTAGTCCAGTTTCT...ACACTCATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
3UTR-3UTR CAA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGAGAAACTGGACTACATaGGCTTTATGCATACAGTTA +
Preference number: 3 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLRNWTT*ALCIQL
Trigger: TAACTGTATGCATAAAGCCAATGTAGTCCAGTTTCT...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
3UTR TCA 72 bp CTGTTATTGTTCCATCAGGAGTTCATGAGTGTGTATTaGAGTGGGATTCAGTTAGCTTGGAACATGATCTTA +
Preference number: 3 (lower is better)
Translates to: LLLFHQEFMSVY*SGIQLAWNMIL
Trigger: TAAGATCATGTTCCAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAATAACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
3UTR-3UTR CAA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCAAGAAGCCTTGCTAAGTaGCTTTTATCAGTTTCACAA +
Preference number: 3 (lower is better)
Translates to: IQLAWNMILETGLHWLYARSLAK*LLSVSQ
Trigger: TTGTGAAACTGATAAAAGCAACTTAGCAAGGCTTCT...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGGCCCACGAGGGCTGGTaGGTCACTGGTCAGGACCGC +
Preference number: 4 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMAHEGW*VTGQDR
Trigger: GCGGTCCTGACCAGTGACTCACCAGCCCTCGTGGGC...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGGGGTGGTGGTGGCGGTaGCGGACAAGGTCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMGWWWR*RTRSWC
Trigger: GCACCAGGACCTTGTCCGCCACCGCCACCACCACCC...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTGCCCACGAGGGCTGGTaGGTCACTGGTCAGGACCGC +
Preference number: 4 (lower is better)
Translates to: FLSLASVHIIPQAWACYCAHEGW*VTGQDR
Trigger: GCGGTCCTGACCAGTGACTCACCAGCCCTCGTGGGC...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp ACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGTGTGGGTGGTGGTGGCGGTaGCGGACAAGGTCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: TSYHRLGPVIVPSGVHECGWWWR*RTRSWC
Trigger: GCACCAGGACCTTGTCCGCCACCGCCACCACCACCC...ACACTCATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTGGGTGGTGGTGGCGGTaGCGGACAAGGTCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: FLSLASVHIIPQAWACYCGWWWR*RTRSWC
Trigger: GCACCAGGACCTTGTCCGCCACCGCCACCACCACCC...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTAGGTCTGGGTGGTGGTaGCGGTGGCGGACAAGGTCC +
Preference number: 4 (lower is better)
Translates to: FLSLASVHIIPQAWACYCRSGWW*RWRTRS
Trigger: GGACCTTGTCCGCCACCGCCACCACCACCCAGACCT...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGGGAGCTTTCAGGCCATaGCACCGGCATCAGGACGTC +
Preference number: 4 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMGAFRP*HRHQDV
Trigger: GACGTCCTGATGCCGGTGCCATGGCCTGAAAGCTCC...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGACTGTGTTCTGGGTaGTCTCGCAGGTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMRLCSG*SRRWGQ
Trigger: CTGACCCCACCTGCGAGATCACCCAGAACACAGTCT...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTGGGTTTTGAAGGTCTaGGTGGTGGTGGCGGTGGCG +
Preference number: 4 (lower is better)
Translates to: FLSLASVHIIPQAWACYCWVLKV*VVVAVA
Trigger: CGCCACCGCCACCACCACCCAGACCTTCAAAACCCA...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGCTGCAGACTGTGTTCTaGGTGATCTCGCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMLQTVF*VISQVG
Trigger: CCCCACCTGCGAGATCACCCAGAACACAGTCTGCAG...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGTCAGGGAAGACGTTATaGTGGCTTTGGCCGGTGCCA +
Preference number: 4 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMSGKTL*WLWPVP
Trigger: TGGCACCGGCCAAAGCCATCATAACGTCTTCCCTGA...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTAGAAGGGGTGGGTTTTaGAGGTCTGGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: FLSLASVHIIPQAWACYCRRGGF*RSGWWW
Trigger: CCACCACCACCCAGACCTTCAAAACCCACCCCTTCT...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGGTGGGGTCAGAAATaGTGGTACAGACCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMRWGQK*WYRPPW
Trigger: CCACGGAGGTCTGTACCATCATTTCTGACCCCACCT...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR GCA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGGATGGCTTTGGCCGGTaGCATTTTCCCCGTCACTGT +
Preference number: 4 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMDGFGR*HFPRHC
Trigger: ACAGTGACGGGGAAAATGGCACCGGCCAAAGCCATC...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGGGGCTGGTGAGTCACTaGTCAGGACCGCCTGCACAC +
Preference number: 4 (lower is better)
Translates to: KRLIATPAHLTSMALKSEGLVSH*SGPPAH
Trigger: GTGTGCAGGCGGTCCTGACCAGTGACTCACCAGCCC...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTGGTACAGACCTCCGTaGGAATGCTCCCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: FLSLASVHIIPQAWACYCWYRPP*ECSLGR
Trigger: CCTGCCAAGGGAGCATTCCCACGGAGGTCTGTACCA...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp TTTAACTCTTCGGTGTCCTGGAGATTTGGCAAGGTTAACCAAGATTTCATTTTTGCCCACGAGGGCTGGTaGGTCACTGGTCAGGACCGC +
Preference number: 4 (lower is better)
Translates to: FNSSVSWRFGKVNQDFIFAHEGW*VTGQDR
Trigger: GCGGTCCTGACCAGTGACTCACCAGCCCTCGTGGGC...AAAAATGAAATCTTGGTTAACCTTGCCAAATCTCCAGGACACCGAAGAGTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409458.3
CDS-3UTR TCA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCAGGGAAGACGTTATaGTGGCTTTGGCCGGTGCCA +
Preference number: 4 (lower is better)
Translates to: FLSLASVHIIPQAWACYCSGKTL*WLWPVP
Trigger: TGGCACCGGCCAAAGCCATCATAACGTCTTCCCTGA...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp ACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGTGTTCAGGGAAGACGTTATaGTGGCTTTGGCCGGTGCCA +
Preference number: 4 (lower is better)
Translates to: TSYHRLGPVIVPSGVHECSGKTL*WLWPVP
Trigger: TGGCACCGGCCAAAGCCATCATAACGTCTTCCCTGA...ACACTCATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTCTCCATCCGGGGTGGTaGGGAAAAGGTTTCCCATCA +
Preference number: 4 (lower is better)
Translates to: FLSLASVHIIPQAWACYCLHPGW*GKGFPS
Trigger: TGATGGGAAACCTTTTCCTCACCACCCCGGATGGAG...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp ACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGTGTAGGTGGGGTCAGAAATaGTGGTACAGACCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: TSYHRLGPVIVPSGVHECRWGQK*WYRPPW
Trigger: CCACGGAGGTCTGTACCATCATTTCTGACCCCACCT...ACACTCATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTAGGTGGGGTCAGAAATaGTGGTACAGACCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: FLSLASVHIIPQAWACYCRWGQK*WYRPPW
Trigger: CCACGGAGGTCTGTACCATCATTTCTGACCCCACCT...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR GCA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTGATGGCTTTGGCCGGTaGCATTTTCCCCGTCACTGT +
Preference number: 4 (lower is better)
Translates to: FLSLASVHIIPQAWACYCDGFGR*HFPRHC
Trigger: ACAGTGACGGGGAAAATGGCACCGGCCAAAGCCATC...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TTCTCTCTTTTTAACTCTTCGGTGTCCTGGAGATTTGGCAAGGTTAACCAAGATGGGCTGGTGAGTCACTaGTCAGGACCGCCTGCACAC +
Preference number: 4 (lower is better)
Translates to: FSLFNSSVSWRFGKVNQDGLVSH*SGPPAH
Trigger: GTGTGCAGGCGGTCCTGACCAGTGACTCACCAGCCC...ATCTTGGTTAACCTTGCCAAATCTCCAGGACACCGAAGAGTTAAAAAGAGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409458.3
CDS-3UTR CCA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGTGGGTTTTGAAGGTCTaGGTGGTGGTGGCGGTGGCG +
Preference number: 4 (lower is better)
Translates to: KRLIATPAHLTSMALKSEWVLKV*VVVAVA
Trigger: CGCCACCGCCACCACCACCCAGACCTTCAAAACCCA...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGCGGATCCTTTTCCTaGTTTCCCGGGAAGAACACG +
Preference number: 4 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMSGSFS*FPGKNT
Trigger: CGTGTTCTTCCCGGGAAACCAGGAAAAGGATCCGCT...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGGCAACAGTGTTCTTCTaGCATCTGTGGTGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMATVFF*HLWCLP
Trigger: AGGGAGGCACCACAGATGCCAGAAGAACACTGTTGC...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGAGAAGGGGTGGGTTTTaGAGGTCTGGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: KRLIATPAHLTSMALKSERRGGF*RSGWWW
Trigger: CCACCACCACCCAGACCTTCAAAACCCACCCCTTCT...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGAGACTGTGTTCTGGGTaGTCTCGCAGGTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: KRLIATPAHLTSMALKSERLCSG*SRRWGQ
Trigger: CTGACCCCACCTGCGAGATCACCCAGAACACAGTCT...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp ACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGTGTAAATCAGGGTGCTCGTaGGAGCCAGGCTTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: TSYHRLGPVIVPSGVHECKSGCS*EPGLCH
Trigger: ATGACACAAGCCTGGCTCTCACGAGCACCCTGATTT...ACACTCATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGAGGGAGATCACAGTaGCAAATATGGCCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMRGRSQ*QIWPSS
Trigger: GCTGCTTGGCCATATTTGTCACTGTGATCTCCCTCT...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTCGGCTTTTGCACGGTTaGGAAAGACACTCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: FLSLASVHIIPQAWACYCRLLHG*ERHSGL
Trigger: AAGGCCTGAGTGTCTTTCTCAACCGTGCAAAAGCCG...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR GCA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGACAAGGTCCTGGTGCTaGAGCTTTCACAGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMTRSWC*SFHSEV
Trigger: AACCTCACTGTGAAAGCTGCAGCACCAGGACCTTGT...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp ACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGTGTAACTCTGAATTCCTCTaGGCCCGTCCACCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: TSYHRLGPVIVPSGVHECNSEFL*ARPPRA
Trigger: TGCTCTTGGTGGACGGGCCCAGAGGAATTCAGAGTT...ACACTCATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCATAAGGTCTGGGTGGTGGTaGCGGTGGCGGACAAGGTCC +
Preference number: 4 (lower is better)
Translates to: SVSLEHDLRNWTTLALCIRSGWW*RWRTRS
Trigger: GGACCTTGTCCGCCACCGCCACCACCACCCAGACCT...TATGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCAAGGTCTGGGTGGTGGTaGCGGTGGCGGACAAGGTCC +
Preference number: 4 (lower is better)
Translates to: IQLAWNMILETGLHWLYARSGWW*RWRTRS
Trigger: GGACCTTGTCCGCCACCGCCACCACCACCCAGACCT...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTGTGGGAATGCTCCCTTaGCAGGTCACGACAAAGTCT +
Preference number: 4 (lower is better)
Translates to: FLSLASVHIIPQAWACYCVGMLP*QVTTKS
Trigger: AGACTTTGTCGTGACCTGCCAAGGGAGCATTCCCAC...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTAGACAGTCACTTCCATaGGTTGAGGCCCAAGTGTCA +
Preference number: 4 (lower is better)
Translates to: FLSLASVHIIPQAWACYCRQSLP*VEAQVS
Trigger: TGACACTTGGGCCTCAACTCATGGAAGTGACTGTCT...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGAGACTGTGTTCTGGGTaGTCTCGCAGGTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLRLCSG*SRRWGQ
Trigger: CTGACCCCACCTGCGAGATCACCCAGAACACAGTCT...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGTGTCATCCCCCAGGGTaGGGTTCACACAGTACGTCC +
Preference number: 4 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLCHPPG*GSHSTS
Trigger: GGACGTACTGTGTGAACCTCACCCTGGGGGATGACA...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTAGAGGGAGATCACAGTaGCAAATATGGCCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: FLSLASVHIIPQAWACYCRGRSQ*QIWPSS
Trigger: GCTGCTTGGCCATATTTGTCACTGTGATCTCCCTCT...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR GCA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGCACATCTTTCACTTGTaGGATGGGAACATATGCCCG +
Preference number: 4 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMHIFHL*DGNICP
Trigger: CGGGCATATGTTCCCATCGCACAAGTGAAAGATGTG...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR GCA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTACAAGGTCCTGGTGCTaGAGCTTTCACAGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: FLSLASVHIIPQAWACYCTRSWC*SFHSEV
Trigger: AACCTCACTGTGAAAGCTGCAGCACCAGGACCTTGT...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCATAGGGCTGGTGAGTCACTaGTCAGGACCGCCTGCACAC +
Preference number: 4 (lower is better)
Translates to: SVSLEHDLRNWTTLALCIGLVSH*SGPPAH
Trigger: GTGTGCAGGCGGTCCTGACCAGTGACTCACCAGCCC...TATGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCAGGGCTGGTGAGTCACTaGTCAGGACCGCCTGCACAC +
Preference number: 4 (lower is better)
Translates to: IQLAWNMILETGLHWLYAGLVSH*SGPPAH
Trigger: GTGTGCAGGCGGTCCTGACCAGTGACTCACCAGCCC...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGCTTTCACTTGTGCGATaGGAACATATGCCCGTCCAT +
Preference number: 4 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMLSLVR*EHMPVH
Trigger: ATGGACGGGCATATGTTCCCATCGCACAAGTGAAAG...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGTGGCGGACAAGGTCCTaGTGCTGCAGCTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: KRLIATPAHLTSMALKSEWRTRS*CCSFHS
Trigger: ACTGTGAAAGCTGCAGCACCAGGACCTTGTCCGCCA...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTGTCCTAAAGAAGGGGTaGGTTTTGAAGGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: FLSLASVHIIPQAWACYCVLKKG*VLKVWV
Trigger: CACCCAGACCTTCAAAACCCACCCCTTCTTTAGGAC...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258733.9
CDS-3UTR CCA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGTGGTACAGACCTCCGTaGGAATGCTCCCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLWYRPP*ECSLGR
Trigger: CCTGCCAAGGGAGCATTCCCACGGAGGTCTGTACCA...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGCTGCAGACTGTGTTCTaGGTGATCTCGCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLLQTVF*VISQVG
Trigger: CCCCACCTGCGAGATCACCCAGAACACAGTCTGCAG...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGTTGCTAAAGAAGGGGTaGGTTTTGAAGGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMLLKKG*VLKVWV
Trigger: CACCCAGACCTTCAAAACCCACCCCTTCTTTAGCAA...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381990.6
CDS-3UTR CCA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGTTCCTAAAGAAGGGGTaGGTTTTGAAGGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMFLKKG*VLKVWV
Trigger: CACCCAGACCTTCAAAACCCACCCCTTCTTTAGGAA...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647578.1
CDS-3UTR TCA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGAGAGACATTCCATGCTaGATTCTCACGGACGCAGGC +
Preference number: 4 (lower is better)
Translates to: KRLIATPAHLTSMALKSERDIPC*ILTDAG
Trigger: GCCTGCGTCCGTGAGAATTCAGCATGGAATGTCTCT...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp TTCTCTCTTTTTAACTCTTCGGTGTCCTGGAGATTTGGCAAGGTTAACCAAGATCTCCATCCGGGGTGGTaGGGAAAAGGTTTCCCATCA +
Preference number: 4 (lower is better)
Translates to: FSLFNSSVSWRFGKVNQDLHPGW*GKGFPS
Trigger: TGATGGGAAACCTTTTCCTCACCACCCCGGATGGAG...ATCTTGGTTAACCTTGCCAAATCTCCAGGACACCGAAGAGTTAAAAAGAGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409458.3
CDS-3UTR TCA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGCTCCATCCGGGGTGGTaGGGAAAAGGTTTCCCATCA +
Preference number: 4 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLLHPGW*GKGFPS
Trigger: TGATGGGAAACCTTTTCCTCACCACCCCGGATGGAG...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGCACAGAAACTCTCACTaGACATCGTCCCAATTTCTG +
Preference number: 4 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMHRNSH*TSSQFL
Trigger: CAGAAATTGGGACGATGTTCAGTGAGAGTTTCTGTG...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGGAAGGTTTCGTCGGATaGATTTCGATCGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMEGFVG*ISIVLL
Trigger: CAGAAGAACGATCGAAATTCATCCGACGAAACCTTC...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTTCCCTCTACAATTGTaGTGGTGGCTTGAAAGTGGC +
Preference number: 4 (lower is better)
Translates to: FLSLASVHIIPQAWACYCFPLQL*WWLESG
Trigger: GCCACTTTCAAGCCACCATCACAATTGTAGAGGGAA...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGAAATCAGGGTGCTCGTaGGAGCCAGGCTTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: KRLIATPAHLTSMALKSEKSGCS*EPGLCH
Trigger: ATGACACAAGCCTGGCTCTCACGAGCACCCTGATTT...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGTTACATGGAAAGCTaGAAGTATCCCGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMSYMES*KYPASS
Trigger: AGAAGAGGCGGGATACTTTCAGCTTTCCATGTAACT...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGTCCATCAGGAGTTCATaGGTGTGTATTGAAGTGGGA +
Preference number: 4 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMSIRSS*VCIEVG
Trigger: TCCCACTTCAATACACACTCATGAACTCCTGATGGA...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp ACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGTGTCTGATCAAGTTGCCATaGAAAACCAGGGACCTCATC +
Preference number: 4 (lower is better)
Translates to: TSYHRLGPVIVPSGVHECLIKLP*KTRDLI
Trigger: GATGAGGTCCCTGGTTTTTCATGGCAACTTGATCAG...ACACTCATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR GCA 90 bp TTCTCTCTTTTTAACTCTTCGGTGTCCTGGAGATTTGGCAAGGTTAACCAAGATGATGGCTTTGGCCGGTaGCATTTTCCCCGTCACTGT +
Preference number: 4 (lower is better)
Translates to: FSLFNSSVSWRFGKVNQDDGFGR*HFPRHC
Trigger: ACAGTGACGGGGAAAATGGCACCGGCCAAAGCCATC...ATCTTGGTTAACCTTGCCAAATCTCCAGGACACCGAAGAGTTAAAAAGAGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409458.3
CDS-3UTR GCA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTCACATCTTTCACTTGTaGGATGGGAACATATGCCCG +
Preference number: 4 (lower is better)
Translates to: FLSLASVHIIPQAWACYCHIFHL*DGNICP
Trigger: CGGGCATATGTTCCCATCGCACAAGTGAAAGATGTG...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR GCA 90 bp ACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGTGTCACATCTTTCACTTGTaGGATGGGAACATATGCCCG +
Preference number: 4 (lower is better)
Translates to: TSYHRLGPVIVPSGVHECHIFHL*DGNICP
Trigger: CGGGCATATGTTCCCATCGCACAAGTGAAAGATGTG...ACACTCATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR GCA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGCGGACAAGGTCCTGGTaGTGCAGCTTTCACAGTGAG +
Preference number: 4 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLRTRSW*CSFHSE
Trigger: CTCACTGTGAAAGCTGCAGCACCAGGACCTTGTCCG...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGCATCATGAAATCGTTTaGCGGCATCAAGTGGCAATC +
Preference number: 4 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMHHEIV*RHQVAI
Trigger: GATTGCCACTTGATGCCGCCAAACGATTTCATGATG...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCAGGAGCTTTCAGGCCATaGCACCGGCATCAGGACGTC +
Preference number: 4 (lower is better)
Translates to: IQLAWNMILETGLHWLYAGAFRP*HRHQDV
Trigger: GACGTCCTGATGCCGGTGCCATGGCCTGAAAGCTCC...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGAGCGGATCCTTTTCCTaGTTTCCCGGGAAGAACACG +
Preference number: 4 (lower is better)
Translates to: KRLIATPAHLTSMALKSESGSFS*FPGKNT
Trigger: CGTGTTCTTCCCGGGAAACCAGGAAAAGGATCCGCT...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGATCATACCACAGGCTTaGGCCTGTTATTGTTCCATC +
Preference number: 4 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMIIPQA*ACYCSI
Trigger: GATGGAACAATAACAGGCCCAAGCCTGTGGTATGAT...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGGCAACAGTGTTCTTCTaGCATCTGTGGTGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: KRLIATPAHLTSMALKSEATVFF*HLWCLP
Trigger: AGGGAGGCACCACAGATGCCAGAAGAACACTGTTGC...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381990.6
ENST00000647578.1
3UTR CAA 72 bp TCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTaGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGT +
Preference number: 4 (lower is better)
Translates to: SESSKCAHHTTG*GLLLFHQEFMS
Trigger: ACTCATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGTGTGGAAGACGTAGATaGAATTCCATCTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMCGRRR*NSIFSI
Trigger: GATGGAGAAGATGGAATTTCATCTACGTCTTCCACA...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCAAGAAGGGGTGGGTTTTaGAGGTCTGGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: IQLAWNMILETGLHWLYARRGGF*RSGWWW
Trigger: CCACCACCACCCAGACCTTCAAAACCCACCCCTTCT...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGATTGTGATGGTGGCTTaGAAGTGGCCATATCTGTTA +
Preference number: 4 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMIVMVA*KWPYLL
Trigger: TAACAGATATGGCCACTTTCAAGCCACCATCACAAT...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGACGTCCCAGACCCATTaGAGGTTCGTCTCACAGTCA +
Preference number: 4 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLTSQTH*RFVSQS
Trigger: TGACTGTGAGACGAACCTTCAATGGGTCTGGGACGT...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCATGTCATCCCCCAGGGTaGGGTTCACACAGTACGTCC +
Preference number: 4 (lower is better)
Translates to: IQLAWNMILETGLHWLYACHPPG*GSHSTS
Trigger: GGACGTACTGTGTGAACCTCACCCTGGGGGATGACA...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGAAATCAGGGTGCTCGTaGGAGCCAGGCTTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLKSGCS*EPGLCH
Trigger: ATGACACAAGCCTGGCTCTCACGAGCACCCTGATTT...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGAGAGGGAGATCACAGTaGCAAATATGGCCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: KRLIATPAHLTSMALKSERGRSQ*QIWPSS
Trigger: GCTGCTTGGCCATATTTGTCACTGTGATCTCCCTCT...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGTCAGGCCTTTGCTTCTaGCCACATTCCCAGGACTAT +
Preference number: 4 (lower is better)
Translates to: KRLIATPAHLTSMALKSESGLCF*PHSQDY
Trigger: ATAGTCCTGGGAATGTGGTCAGAAGCAAAGGCCTGA...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGCGGCTTTTGCACGGTTaGGAAAGACACTCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLRLLHG*ERHSGL
Trigger: AAGGCCTGAGTGTCTTTCTCAACCGTGCAAAAGCCG...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTGTTTCACAACATGGCTaGAGCTGCCTGCAGTATAAT +
Preference number: 4 (lower is better)
Translates to: FLSLASVHIIPQAWACYCVSQHG*SCLQYN
Trigger: ATTATACTGCAGGCAGCTTCAGCCATGTTGTGAAAC...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTAGTTACATGGAAAGCTaGAAGTATCCCGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: FLSLASVHIIPQAWACYCSYMES*KYPASS
Trigger: AGAAGAGGCGGGATACTTTCAGCTTTCCATGTAACT...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGAACTCTGAATTCCTCTaGGCCCGTCCACCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLNSEFL*ARPPRA
Trigger: TGCTCTTGGTGGACGGGCCCAGAGGAATTCAGAGTT...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGTTTGGCGGCATCAAGTaGCAATCTTGCAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLFGGIK*QSCSQE
Trigger: CTCCTGGCTGCAAGATTGCCACTTGATGCCGCCAAA...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTCATCATGAAATCGTTTaGCGGCATCAAGTGGCAATC +
Preference number: 4 (lower is better)
Translates to: FLSLASVHIIPQAWACYCHHEIV*RHQVAI
Trigger: GATTGCCACTTGATGCCGCCAAACGATTTCATGATG...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGTTGGCATCTTCCTTTTaGCATCTAGGGAATATCAGG +
Preference number: 4 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMLASSF*HLGNIR
Trigger: CCTGATATTCCCTAGATGCCAAAAGGAAGATGCCAA...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGGTGGGAATGCTCCCTTaGCAGGTCACGACAAAGTCT +
Preference number: 4 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLVGMLP*QVTTKS
Trigger: AGACTTTGTCGTGACCTGCCAAGGGAGCATTCCCAC...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCATATGGTACAGACCTCCGTaGGAATGCTCCCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SVSLEHDLRNWTTLALCIWYRPP*ECSLGR
Trigger: CCTGCCAAGGGAGCATTCCCACGGAGGTCTGTACCA...TATGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TTCTCTCTTTTTAACTCTTCGGTGTCCTGGAGATTTGGCAAGGTTAACCAAGATCAGGCTGGAGTGCAATaGCTCAATCTCCTCTCACTG +
Preference number: 4 (lower is better)
Translates to: FSLFNSSVSWRFGKVNQDQAGVQ*LNLLSL
Trigger: CAGTGAGAGGAGATTGAGCCATTGCACTCCAGCCTG...ATCTTGGTTAACCTTGCCAAATCTCCAGGACACCGAAGAGTTAAAAAGAGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409458.3
CDS-3UTR TCA 90 bp TTTATCTCTCACTGTTCACTCATGCTAAGGAAAGTTAGCAGGGTGACTGTTATTAGAGACATTCCATGCTaGATTCTCACGGACGCAGGC +
Preference number: 4 (lower is better)
Translates to: FISHCSLMLRKVSRVTVIRDIPC*ILTDAG
Trigger: GCCTGCGTCCGTGAGAATTCAGCATGGAATGTCTCT...AATAACAGTCACCCTGCTAACTTTCCTTAGCATGAGTGAACAGTGAGAGATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409458.3
CDS-3UTR TCA 90 bp TTCTCTCTTTTTAACTCTTCGGTGTCCTGGAGATTTGGCAAGGTTAACCAAGATTTGCCCAGCACATCATaGAATCGTTTGGCGGCATCA +
Preference number: 4 (lower is better)
Translates to: FSLFNSSVSWRFGKVNQDLPSTS*NRLAAS
Trigger: TGATGCCGCCAAACGATTTCATGATGTGCTGGGCAA...ATCTTGGTTAACCTTGCCAAATCTCCAGGACACCGAAGAGTTAAAAAGAGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409458.3
CDS-3UTR TCA 90 bp TTTAACTCTTCGGTGTCCTGGAGATTTGGCAAGGTTAACCAAGATTTCATTTTTTCAGGGAAGACGTTATaGTGGCTTTGGCCGGTGCCA +
Preference number: 4 (lower is better)
Translates to: FNSSVSWRFGKVNQDFIFSGKTL*WLWPVP
Trigger: TGGCACCGGCCAAAGCCATCATAACGTCTTCCCTGA...AAAAATGAAATCTTGGTTAACCTTGCCAAATCTCCAGGACACCGAAGAGTTAAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000409458.3
CDS-3UTR TCA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTGTGGAAGACGTAGATaGAATTCCATCTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: FLSLASVHIIPQAWACYCCGRRR*NSIFSI
Trigger: GATGGAGAAGATGGAATTTCATCTACGTCTTCCACA...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp ACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGTGTATTGTGATGGTGGCTTaGAAGTGGCCATATCTGTTA +
Preference number: 4 (lower is better)
Translates to: TSYHRLGPVIVPSGVHECIVMVA*KWPYLL
Trigger: TAACAGATATGGCCACTTTCAAGCCACCATCACAAT...ACACTCATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGTTCCCTCTACAATTGTaGTGGTGGCTTGAAAGTGGC +
Preference number: 4 (lower is better)
Translates to: KRLIATPAHLTSMALKSEFPLQL*WWLESG
Trigger: GCCACTTTCAAGCCACCATCACAATTGTAGAGGGAA...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGTCAGGCCTTTGCTTCTaGCCACATTCCCAGGACTAT +
Preference number: 4 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLSGLCF*PHSQDY
Trigger: ATAGTCCTGGGAATGTGGTCAGAAGCAAAGGCCTGA...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp ACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGTGTTCACATCAATGGCACTaGAAAGTGAGCTTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: TSYHRLGPVIVPSGVHECSHQWH*KVSFRN
Trigger: GTTTCTGAAGCTCACTTTTCAGTGCCATTGATGTGA...ACACTCATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGCTGATCAAGTTGCCATaGAAAACCAGGGACCTCATC +
Preference number: 4 (lower is better)
Translates to: KRLIATPAHLTSMALKSELIKLP*KTRDLI
Trigger: GATGAGGTCCCTGGTTTTTCATGGCAACTTGATCAG...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR GCA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTCAGAAGGTCTTTCATTaGCCAGCACATCATGAAATC +
Preference number: 4 (lower is better)
Translates to: FLSLASVHIIPQAWACYCQKVFH*PAHHEI
Trigger: GATTTCATGATGTGCTGGGCAATGAAAGACCTTCTG...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR GCA 90 bp TCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCATAGATGGCTTTGGCCGGTaGCATTTTCCCCGTCACTGT +
Preference number: 4 (lower is better)
Translates to: SVSLEHDLRNWTTLALCIDGFGR*HFPRHC
Trigger: ACAGTGACGGGGAAAATGGCACCGGCCAAAGCCATC...TATGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR GCA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGTGCGATGGGAACATATaGCCGTCCATGTCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: KRLIATPAHLTSMALKSECDGNI*PSMSSV
Trigger: TACAGAAGACATGGACGGGCATATGTTCCCATCGCA...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR GCA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCACGGACAAGGTCCTGGTaGTGCAGCTTTCACAGTGAG +
Preference number: 4 (lower is better)
Translates to: IQLAWNMILETGLHWLYARTRSW*CSFHSE
Trigger: CTCACTGTGAAAGCTGCAGCACCAGGACCTTGTCCG...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGTCCCCGCTTCCACACTaGGTAGAGTTTTTCATTCCA +
Preference number: 4 (lower is better)
Translates to: KRLIATPAHLTSMALKSESPLPH*VEFFIP
Trigger: TGGAATGAAAAACTCTACCCAGTGTGGAAGCGGGGA...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGGCCCAAGTGTCACATTaGCTGTGTTCACAGAAACTC +
Preference number: 4 (lower is better)
Translates to: KRLIATPAHLTSMALKSEAQVSH*LCSQKL
Trigger: GAGTTTCTGTGAACACAGCCAATGTGACACTTGGGC...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGCTTTCACTTGTGCGATaGGAACATATGCCCGTCCAT +
Preference number: 4 (lower is better)
Translates to: KRLIATPAHLTSMALKSELSLVR*EHMPVH
Trigger: ATGGACGGGCATATGTTCCCATCGCACAAGTGAAAG...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp ACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGTGTGATTCACAGTATGATTaGTGGAAACAAACAGGCCAG +
Preference number: 4 (lower is better)
Translates to: TSYHRLGPVIVPSGVHECDSQYD*WKQTGQ
Trigger: CTGGCCTGTTTGTTTCCACCAATCATACTGTGAATC...ACACTCATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCATATGGCGGACAAGGTCCTaGTGCTGCAGCTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: SVSLEHDLRNWTTLALCIWRTRS*CCSFHS
Trigger: ACTGTGAAAGCTGCAGCACCAGGACCTTGTCCGCCA...TATGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGGAGTGTGTATTGAAGTaGGATTCAGTTAGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMECVLK*DSVSLE
Trigger: TTCCAAGCTAACTGAATCCCACTTCAATACACACTC...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTAGAACATGCGGCGTTTaGTTTTCTGTCCTTGTGATA +
Preference number: 4 (lower is better)
Translates to: FLSLASVHIIPQAWACYCRTCGV*FSVLVI
Trigger: TATCACAAGGACAGAAAACCAAACGCCGCATGTTCT...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647578.1
CDS-3UTR TCA 90 bp TCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCATAAGAGACATTCCATGCTaGATTCTCACGGACGCAGGC +
Preference number: 4 (lower is better)
Translates to: SVSLEHDLRNWTTLALCIRDIPC*ILTDAG
Trigger: GCCTGCGTCCGTGAGAATTCAGCATGGAATGTCTCT...TATGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGCACAGAAACTCTCACTaGACATCGTCCCAATTTCTG +
Preference number: 4 (lower is better)
Translates to: KRLIATPAHLTSMALKSEHRNSH*TSSQFL
Trigger: CAGAAATTGGGACGATGTTCAGTGAGAGTTTCTGTG...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCAACGTCCCAGACCCATTaGAGGTTCGTCTCACAGTCA +
Preference number: 4 (lower is better)
Translates to: IQLAWNMILETGLHWLYATSQTH*RFVSQS
Trigger: TGACTGTGAGACGAACCTTCAATGGGTCTGGGACGT...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp TCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCATAACGTCCCAGACCCATTaGAGGTTCGTCTCACAGTCA +
Preference number: 4 (lower is better)
Translates to: SVSLEHDLRNWTTLALCITSQTH*RFVSQS
Trigger: TGACTGTGAGACGAACCTTCAATGGGTCTGGGACGT...TATGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR GCA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGATCAAGTGGCAATCTTaGAGCCAGGAGCAGAAATCC +
Preference number: 4 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLIKWQS*SQEQKS
Trigger: GGATTTCTGCTCCTGGCTGCAAGATTGCCACTTGAT...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR GCA 90 bp TTTAACTCTTCGGTGTCCTGGAGATTTGGCAAGGTTAACCAAGATTTCATTTTTCTCCGCCTTCCAAGGTaGTGGGATTACAAGTGTGAG +
Preference number: 4 (lower is better)
Translates to: FNSSVSWRFGKVNQDFIFLRLPR*WDYKCE
Trigger: CTCACACTTGTAATCCCAGCACCTTGGAAGGCGGAG...AAAAATGAAATCTTGGTTAACCTTGCCAAATCTCCAGGACACCGAAGAGTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409458.3
CDS-3UTR GCA 90 bp TTTAACTCTTCGGTGTCCTGGAGATTTGGCAAGGTTAACCAAGATTTCATTTTTTTGCCCAGGCTGGAGTaGAATGGCTCAATCTCCTCT +
Preference number: 4 (lower is better)
Translates to: FNSSVSWRFGKVNQDFIFLPRLE*NGSISS
Trigger: AGAGGAGATTGAGCCATTGCACTCCAGCCTGGGCAA...AAAAATGAAATCTTGGTTAACCTTGCCAAATCTCCAGGACACCGAAGAGTTAAA
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000409458.3
CDS-3UTR CCA 90 bp TTTAACTCTTCGGTGTCCTGGAGATTTGGCAAGGTTAACCAAGATTTCATTTTTAACTCTGAATTCCTCTaGGCCCGTCCACCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: FNSSVSWRFGKVNQDFIFNSEFL*ARPPRA
Trigger: TGCTCTTGGTGGACGGGCCCAGAGGAATTCAGAGTT...AAAAATGAAATCTTGGTTAACCTTGCCAAATCTCCAGGACACCGAAGAGTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409458.3
CDS-3UTR CCA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCATTTGGCGGCATCAAGTaGCAATCTTGCAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: IQLAWNMILETGLHWLYAFGGIK*QSCSQE
Trigger: CTCCTGGCTGCAAGATTGCCACTTGATGCCGCCAAA...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGCATCATGAAATCGTTTaGCGGCATCAAGTGGCAATC +
Preference number: 4 (lower is better)
Translates to: KRLIATPAHLTSMALKSEHHEIV*RHQVAI
Trigger: GATTGCCACTTGATGCCGCCAAACGATTTCATGATG...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGTCCCCGCTTCCACACTaGGTAGAGTTTTTCATTCCA +
Preference number: 4 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLSPLPH*VEFFIP
Trigger: TGGAATGAAAAACTCTACCCAGTGTGGAAGCGGGGA...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGGCCCAAGTGTCACATTaGCTGTGTTCACAGAAACTC +
Preference number: 4 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLAQVSH*LCSQKL
Trigger: GAGTTTCTGTGAACACAGCCAATGTGACACTTGGGC...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCACAGTATGATTGGTaGAAACAAACAGGCCAGTAT +
Preference number: 4 (lower is better)
Translates to: FLSLASVHIIPQAWACYCSQYDW*KQTGQY
Trigger: ATACTGGCCTGTTTGTTTCCACCAATCATACTGTGA...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCAGTGGGAATGCTCCCTTaGCAGGTCACGACAAAGTCT +
Preference number: 4 (lower is better)
Translates to: IQLAWNMILETGLHWLYAVGMLP*QVTTKS
Trigger: AGACTTTGTCGTGACCTGCCAAGGGAGCATTCCCAC...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCATAAGCGGATCCTTTTCCTaGTTTCCCGGGAAGAACACG +
Preference number: 4 (lower is better)
Translates to: SVSLEHDLRNWTTLALCISGSFS*FPGKNT
Trigger: CGTGTTCTTCCCGGGAAACCAGGAAAAGGATCCGCT...TATGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGACTCAGCATCATGCCTaGTATATAAAAAGCACTAAC +
Preference number: 4 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMTQHHA*YIKSTN
Trigger: GTTAGTGCTTTTTATATACCAGGCATGATGCTGAGT...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TTTAACTCTTCGGTGTCCTGGAGATTTGGCAAGGTTAACCAAGATTTCATTTTTGCAACAGTGTTCTTCTaGCATCTGTGGTGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: FNSSVSWRFGKVNQDFIFATVFF*HLWCLP
Trigger: AGGGAGGCACCACAGATGCCAGAAGAACACTGTTGC...AAAAATGAAATCTTGGTTAACCTTGCCAAATCTCCAGGACACCGAAGAGTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409458.3
CDS-3UTR TCA 90 bp TCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCATATTGCCCAGCACATCATaGAATCGTTTGGCGGCATCA +
Preference number: 4 (lower is better)
Translates to: SVSLEHDLRNWTTLALCILPSTS*NRLAAS
Trigger: TGATGCCGCCAAACGATTTCATGATGTGCTGGGCAA...TATGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGTGTGGAAGACGTAGATaGAATTCCATCTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: KRLIATPAHLTSMALKSECGRRR*NSIFSI
Trigger: GATGGAGAAGATGGAATTTCATCTACGTCTTCCACA...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp TCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCATAAGACAGTCACTTCCATaGGTTGAGGCCCAAGTGTCA +
Preference number: 4 (lower is better)
Translates to: SVSLEHDLRNWTTLALCIRQSLP*VEAQVS
Trigger: TGACACTTGGGCCTCAACTCATGGAAGTGACTGTCT...TATGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCAAGACAGTCACTTCCATaGGTTGAGGCCCAAGTGTCA +
Preference number: 4 (lower is better)
Translates to: IQLAWNMILETGLHWLYARQSLP*VEAQVS
Trigger: TGACACTTGGGCCTCAACTCATGGAAGTGACTGTCT...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp TCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCATATCAGGCCTTTGCTTCTaGCCACATTCCCAGGACTAT +
Preference number: 4 (lower is better)
Translates to: SVSLEHDLRNWTTLALCISGLCF*PHSQDY
Trigger: ATAGTCCTGGGAATGTGGTCAGAAGCAAAGGCCTGA...TATGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR GCA 90 bp TTTATCTCTCACTGTTCACTCATGCTAAGGAAAGTTAGCAGGGTGACTGTTATTATCAAGTGGCAATCTTaGAGCCAGGAGCAGAAATCC +
Preference number: 4 (lower is better)
Translates to: FISHCSLMLRKVSRVTVIIKWQS*SQEQKS
Trigger: GGATTTCTGCTCCTGGCTGCAAGATTGCCACTTGAT...AATAACAGTCACCCTGCTAACTTTCCTTAGCATGAGTGAACAGTGAGAGATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409458.3
CDS-3UTR GCA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGCAGAAGGTCTTTCATTaGCCAGCACATCATGAAATC +
Preference number: 4 (lower is better)
Translates to: KRLIATPAHLTSMALKSEQKVFH*PAHHEI
Trigger: GATTTCATGATGTGCTGGGCAATGAAAGACCTTCTG...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR GCA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCAACAAGGTCCTGGTGCTaGAGCTTTCACAGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: IQLAWNMILETGLHWLYATRSWC*SFHSEV
Trigger: AACCTCACTGTGAAAGCTGCAGCACCAGGACCTTGT...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR GCA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGTTCTGGCATCTGTGGTaGCTCCCTCTCTATTTTAAT +
Preference number: 4 (lower is better)
Translates to: KRLIATPAHLTSMALKSEFWHLW*LPLYFN
Trigger: ATTAAAATAGAGAGGGAGGCACCACAGATGCCAGAA...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381990.6
CDS-3UTR CCA 90 bp TTTATCTCTCACTGTTCACTCATGCTAAGGAAAGTTAGCAGGGTGACTGTTATTTCCCCGCTTCCACACTaGGTAGAGTTTTTCATTCCA +
Preference number: 4 (lower is better)
Translates to: FISHCSLMLRKVSRVTVISPLPH*VEFFIP
Trigger: TGGAATGAAAAACTCTACCCAGTGTGGAAGCGGGGA...AATAACAGTCACCCTGCTAACTTTCCTTAGCATGAGTGAACAGTGAGAGATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409458.3
CDS-3UTR CCA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGAGGACGTCTGTCATCTaGATGATGTTAACCTCTAAG +
Preference number: 4 (lower is better)
Translates to: KRLIATPAHLTSMALKSERTSVI*MMLTSK
Trigger: CTTAGAGGTTAACATCATCCAGATGACAGACGTCCT...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGATCAGTTTCACAACATaGCTGAAGCTGCCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLISFTT*LKLPAV
Trigger: TACTGCAGGCAGCTTCAGCCATGTTGTGAAACTGAT...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTCATGATCTTAGAAACTaGACTACATTGGCTTTATGC +
Preference number: 4 (lower is better)
Translates to: FLSLASVHIIPQAWACYCHDLRN*TTLALC
Trigger: GCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATG...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp ACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGTGTGGGATTCAGTTAGCTTaGAACATGATCTTAGAAACT +
Preference number: 4 (lower is better)
Translates to: TSYHRLGPVIVPSGVHECGIQLA*NMILET
Trigger: AGTTTCTAAGATCATGTTCCAAGCTAACTGAATCCC...ACACTCATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTACTCAGCATCATGCCTaGTATATAAAAAGCACTAAC +
Preference number: 4 (lower is better)
Translates to: FLSLASVHIIPQAWACYCTQHHA*YIKSTN
Trigger: GTTAGTGCTTTTTATATACCAGGCATGATGCTGAGT...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGTTCTTCTGGCATCTGTaGTGCCTCCCTCTCTATTTT +
Preference number: 4 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLFFWHL*CLPLYF
Trigger: AAAATAGAGAGGGAGGCACCACAGATGCCAGAAGAA...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGAAGTGGCTAGGATCATaGATCAGGACATCAAACATA +
Preference number: 4 (lower is better)
Translates to: KRLIATPAHLTSMALKSEKWLGS*IRTSNI
Trigger: TATGTTTGATGTCCTGATTCATGATCCTAGCCACTT...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGATTGTGATGGTGGCTTaGAAGTGGCCATATCTGTTA +
Preference number: 4 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLIVMVA*KWPYLL
Trigger: TAACAGATATGGCCACTTTCAAGCCACCATCACAAT...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp TCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCATACTGATCAAGTTGCCATaGAAAACCAGGGACCTCATC +
Preference number: 4 (lower is better)
Translates to: SVSLEHDLRNWTTLALCILIKLP*KTRDLI
Trigger: GATGAGGTCCCTGGTTTTTCATGGCAACTTGATCAG...TATGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR GCA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCAATCAAGTGGCAATCTTaGAGCCAGGAGCAGAAATCC +
Preference number: 4 (lower is better)
Translates to: IQLAWNMILETGLHWLYAIKWQS*SQEQKS
Trigger: GGATTTCTGCTCCTGGCTGCAAGATTGCCACTTGAT...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR GCA 90 bp TCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCATATGCGATGGGAACATATaGCCGTCCATGTCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: SVSLEHDLRNWTTLALCICDGNI*PSMSSV
Trigger: TACAGAAGACATGGACGGGCATATGTTCCCATCGCA...TATGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TTTATCTCTCACTGTTCACTCATGCTAAGGAAAGTTAGCAGGGTGACTGTTATTCATCATGAAATCGTTTaGCGGCATCAAGTGGCAATC +
Preference number: 4 (lower is better)
Translates to: FISHCSLMLRKVSRVTVIHHEIV*RHQVAI
Trigger: GATTGCCACTTGATGCCGCCAAACGATTTCATGATG...AATAACAGTCACCCTGCTAACTTTCCTTAGCATGAGTGAACAGTGAGAGATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409458.3
CDS-3UTR CCA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCATCCCCGCTTCCACACTaGGTAGAGTTTTTCATTCCA +
Preference number: 4 (lower is better)
Translates to: IQLAWNMILETGLHWLYASPLPH*VEFFIP
Trigger: TGGAATGAAAAACTCTACCCAGTGTGGAAGCGGGGA...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGTTGGCATCTTCCTTTTaGCATCTAGGGAATATCAGG +
Preference number: 4 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLLASSF*HLGNIR
Trigger: CCTGATATTCCCTAGATGCCAAAAGGAAGATGCCAA...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCAGCCCAAGTGTCACATTaGCTGTGTTCACAGAAACTC +
Preference number: 4 (lower is better)
Translates to: IQLAWNMILETGLHWLYAAQVSH*LCSQKL
Trigger: GAGTTTCTGTGAACACAGCCAATGTGACACTTGGGC...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGGATTCACAGTATGATTaGTGGAAACAAACAGGCCAG +
Preference number: 4 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLDSQYD*WKQTGQ
Trigger: CTGGCCTGTTTGTTTCCACCAATCATACTGTGAATC...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGAGGACGTCTGTCATCTaGATGATGTTAACCTCTAAG +
Preference number: 4 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLRTSVI*MMLTSK
Trigger: CTTAGAGGTTAACATCATCCAGATGACAGACGTCCT...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp ACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGTGTCAGGGACCTCATCTTTaGAAAGTCTTAATATATGAT +
Preference number: 4 (lower is better)
Translates to: TSYHRLGPVIVPSGVHECQGPHL*KVLIYD
Trigger: ATCATATATTAAGACTTTCCAAAGATGAGGTCCCTG...ACACTCATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TTTATCTCTCACTGTTCACTCATGCTAAGGAAAGTTAGCAGGGTGACTGTTATTAACTCTTCGGTGTCCTaGAGATTTGGCAAGGTTAAC +
Preference number: 4 (lower is better)
Translates to: FISHCSLMLRKVSRVTVINSSVS*RFGKVN
Trigger: GTTAACCTTGCCAAATCTCCAGGACACCGAAGAGTT...AATAACAGTCACCCTGCTAACTTTCCTTAGCATGAGTGAACAGTGAGAGATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409458.3
CDS-3UTR TCA 90 bp TCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCATACACAGAAACTCTCACTaGACATCGTCCCAATTTCTG +
Preference number: 4 (lower is better)
Translates to: SVSLEHDLRNWTTLALCIHRNSH*TSSQFL
Trigger: CAGAAATTGGGACGATGTTCAGTGAGAGTTTCTGTG...TATGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCAGAAGGTTTCGTCGGATaGATTTCGATCGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: IQLAWNMILETGLHWLYAEGFVG*ISIVLL
Trigger: CAGAAGAACGATCGAAATTCATCCGACGAAACCTTC...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCAGTTTCACAACATGGCTaGAGCTGCCTGCAGTATAAT +
Preference number: 4 (lower is better)
Translates to: IQLAWNMILETGLHWLYAVSQHG*SCLQYN
Trigger: ATTATACTGCAGGCAGCTTCAGCCATGTTGTGAAAC...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCATCCATCAGGAGTTCATaGGTGTGTATTGAAGTGGGA +
Preference number: 4 (lower is better)
Translates to: IQLAWNMILETGLHWLYASIRSS*VCIEVG
Trigger: TCCCACTTCAATACACACTCATGAACTCCTGATGGA...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR GCA 90 bp TCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCATAGAAGAACACGGCTTTTaGACGGTTGAGAAAGACACT +
Preference number: 4 (lower is better)
Translates to: SVSLEHDLRNWTTLALCIEEHGF*TVEKDT
Trigger: AGTGTCTTTCTCAACCGTGCAAAAGCCGTGTTCTTC...TATGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR GCA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCAGAAGAACACGGCTTTTaGACGGTTGAGAAAGACACT +
Preference number: 4 (lower is better)
Translates to: IQLAWNMILETGLHWLYAEEHGF*TVEKDT
Trigger: AGTGTCTTTCTCAACCGTGCAAAAGCCGTGTTCTTC...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TTTATCTCTCACTGTTCACTCATGCTAAGGAAAGTTAGCAGGGTGACTGTTATTTTGGCATCTTCCTTTTaGCATCTAGGGAATATCAGG +
Preference number: 4 (lower is better)
Translates to: FISHCSLMLRKVSRVTVILASSF*HLGNIR
Trigger: CCTGATATTCCCTAGATGCCAAAAGGAAGATGCCAA...AATAACAGTCACCCTGCTAACTTTCCTTAGCATGAGTGAACAGTGAGAGATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409458.3
CDS-3UTR CCA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGTCACAGTATGATTGGTaGAAACAAACAGGCCAGTAT +
Preference number: 4 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLSQYDW*KQTGQY
Trigger: ATACTGGCCTGTTTGTTTCCACCAATCATACTGTGA...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGCCATATCTGTTAATCTaGCAGTTTTCATCAGGAATC +
Preference number: 4 (lower is better)
Translates to: KRLIATPAHLTSMALKSEPYLLI*QFSSGI
Trigger: GATTCCTGATGAAAACTGCCAGATTAACAGATATGG...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGACTCCTTTAAATTCTTaGTTTTTGAGTAGCGGATCC +
Preference number: 4 (lower is better)
Translates to: KRLIATPAHLTSMALKSETPLNS*FLSSGS
Trigger: GGATCCGCTACTCAAAAACCAAGAATTTAAAGGAGT...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGCATGATCTTAGAAACTaGACTACATTGGCTTTATGC +
Preference number: 4 (lower is better)
Translates to: KRLIATPAHLTSMALKSEHDLRN*TTLALC
Trigger: GCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATG...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGGGGATTCAGTTAGCTTaGAACATGATCTTAGAAACT +
Preference number: 4 (lower is better)
Translates to: KRLIATPAHLTSMALKSEGIQLA*NMILET
Trigger: AGTTTCTAAGATCATGTTCCAAGCTAACTGAATCCC...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGGAGTGTGTATTGAAGTaGGATTCAGTTAGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLECVLK*DSVSLE
Trigger: TTCCAAGCTAACTGAATCCCACTTCAATACACACTC...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCAATCATACCACAGGCTTaGGCCTGTTATTGTTCCATC +
Preference number: 4 (lower is better)
Translates to: IQLAWNMILETGLHWLYAIIPQA*ACYCSI
Trigger: GATGGAACAATAACAGGCCCAAGCCTGTGGTATGAT...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCATAATCATACCACAGGCTTaGGCCTGTTATTGTTCCATC +
Preference number: 4 (lower is better)
Translates to: SVSLEHDLRNWTTLALCIIIPQA*ACYCSI
Trigger: GATGGAACAATAACAGGCCCAAGCCTGTGGTATGAT...TATGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCATATTCTTCTGGCATCTGTaGTGCCTCCCTCTCTATTTT +
Preference number: 4 (lower is better)
Translates to: SVSLEHDLRNWTTLALCIFFWHL*CLPLYF
Trigger: AAAATAGAGAGGGAGGCACCACAGATGCCAGAAGAA...TATGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TTTAACTCTTCGGTGTCCTGGAGATTTGGCAAGGTTAACCAAGATTTCATTTTTTTCTTCTGGCATCTGTaGTGCCTCCCTCTCTATTTT +
Preference number: 4 (lower is better)
Translates to: FNSSVSWRFGKVNQDFIFFFWHL*CLPLYF
Trigger: AAAATAGAGAGGGAGGCACCACAGATGCCAGAAGAA...AAAAATGAAATCTTGGTTAACCTTGCCAAATCTCCAGGACACCGAAGAGTTAAA
40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000409458.3
3UTR CAA 72 bp CCTGTTATTGTTCCATCAGGAGTTCATGAGTGTGTATaGAAGTGGGATTCAGTTAGCTTGGAACATGATCTT +
Preference number: 4 (lower is better)
Translates to: PVIVPSGVHECV*KWDSVSLEHDL
Trigger: AAGATCATGTTCCAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAATAACAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp TTTAACTCTTCGGTGTCCTGGAGATTTGGCAAGGTTAACCAAGATTTCATTTTTTGTGGAAGACGTAGATaGAATTCCATCTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: FNSSVSWRFGKVNQDFIFCGRRR*NSIFSI
Trigger: GATGGAGAAGATGGAATTTCATCTACGTCTTCCACA...AAAAATGAAATCTTGGTTAACCTTGCCAAATCTCCAGGACACCGAAGAGTTAAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000409458.3
CDS-3UTR TCA 90 bp TCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCATATCACATCAATGGCACTaGAAAGTGAGCTTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: SVSLEHDLRNWTTLALCISHQWH*KVSFRN
Trigger: GTTTCTGAAGCTCACTTTTCAGTGCCATTGATGTGA...TATGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp TTTAACTCTTCGGTGTCCTGGAGATTTGGCAAGGTTAACCAAGATTTCATTTTTGGAAAGTTAGCAGGGTaGCTGTTATTAACTCTCTGT +
Preference number: 4 (lower is better)
Translates to: FNSSVSWRFGKVNQDFIFGKLAG*LLLTLC
Trigger: ACAGAGAGTTAATAACAGTCACCCTGCTAACTTTCC...AAAAATGAAATCTTGGTTAACCTTGCCAAATCTCCAGGACACCGAAGAGTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409458.3
CDS-3UTR GCA 90 bp TTTAACTCTTCGGTGTCCTGGAGATTTGGCAAGGTTAACCAAGATTTCATTTTTTTCTGGCATCTGTGGTaGCTCCCTCTCTATTTTAAT +
Preference number: 4 (lower is better)
Translates to: FNSSVSWRFGKVNQDFIFFWHLW*LPLYFN
Trigger: ATTAAAATAGAGAGGGAGGCACCACAGATGCCAGAA...AAAAATGAAATCTTGGTTAACCTTGCCAAATCTCCAGGACACCGAAGAGTTAAA
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000409458.3
CDS-3UTR CCA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCATTGGCATCTTCCTTTTaGCATCTAGGGAATATCAGG +
Preference number: 4 (lower is better)
Translates to: IQLAWNMILETGLHWLYALASSF*HLGNIR
Trigger: CCTGATATTCCCTAGATGCCAAAAGGAAGATGCCAA...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGCCATATCTGTTAATCTaGCAGTTTTCATCAGGAATC +
Preference number: 4 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLPYLLI*QFSSGI
Trigger: GATTCCTGATGAAAACTGCCAGATTAACAGATATGG...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCAAGGACGTCTGTCATCTaGATGATGTTAACCTCTAAG +
Preference number: 4 (lower is better)
Translates to: IQLAWNMILETGLHWLYARTSVI*MMLTSK
Trigger: CTTAGAGGTTAACATCATCCAGATGACAGACGTCCT...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGCAGGGACCTCATCTTTaGAAAGTCTTAATATATGAT +
Preference number: 4 (lower is better)
Translates to: KRLIATPAHLTSMALKSEQGPHL*KVLIYD
Trigger: ATCATATATTAAGACTTTCCAAAGATGAGGTCCCTG...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCAAAGTGGCTAGGATCATaGATCAGGACATCAAACATA +
Preference number: 4 (lower is better)
Translates to: IQLAWNMILETGLHWLYAKWLGS*IRTSNI
Trigger: TATGTTTGATGTCCTGATTCATGATCCTAGCCACTT...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR TCA 90 bp TCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCATAAAGTGGCTAGGATCATaGATCAGGACATCAAACATA +
Preference number: 4 (lower is better)
Translates to: SVSLEHDLRNWTTLALCIKWLGS*IRTSNI
Trigger: TATGTTTGATGTCCTGATTCATGATCCTAGCCACTT...TATGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCATCACAGTATGATTGGTaGAAACAAACAGGCCAGTAT +
Preference number: 4 (lower is better)
Translates to: IQLAWNMILETGLHWLYASQYDW*KQTGQY
Trigger: ATACTGGCCTGTTTGTTTCCACCAATCATACTGTGA...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCAGAGTGTGTATTGAAGTaGGATTCAGTTAGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: IQLAWNMILETGLHWLYAECVLK*DSVSLE
Trigger: TTCCAAGCTAACTGAATCCCACTTCAATACACACTC...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGCAGGGACCTCATCTTTaGAAAGTCTTAATATATGAT +
Preference number: 4 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLQGPHL*KVLIYD
Trigger: ATCATATATTAAGACTTTCCAAAGATGAGGTCCCTG...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCATAGAAACTGGACTACATTaGCTTTATGCATACAGTTAC +
Preference number: 4 (lower is better)
Translates to: SVSLEHDLRNWTTLALCIETGLH*LYAYSY
Trigger: GTAACTGTATGCATAAAGCCAATGTAGTCCAGTTTC...TATGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCAGGGATTCAGTTAGCTTaGAACATGATCTTAGAAACT +
Preference number: 4 (lower is better)
Translates to: IQLAWNMILETGLHWLYAGIQLA*NMILET
Trigger: AGTTTCTAAGATCATGTTCCAAGCTAACTGAATCCC...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CCA 90 bp TCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCATAACTCAGCATCATGCCTaGTATATAAAAAGCACTAAC +
Preference number: 4 (lower is better)
Translates to: SVSLEHDLRNWTTLALCITQHHA*YIKSTN
Trigger: GTTAGTGCTTTTTATATACCAGGCATGATGCTGAGT...TATGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
3UTR CAA 72 bp TATGATTTCAAATATGTGCAGCGACTGTACAAAAATTaGGAAATATACACAAGAGTGTCACTCAGCATCATG +
Preference number: 4 (lower is better)
Translates to: YDFKYVQRLYKN*EIYTRVSLSIM
Trigger: CATGATGCTGAGTGACACTCTTGTGTATATTTCCAAATTTTTGTACAGTCGCTGCACATATTTGAAATCATA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS GCA 90 bp CACAGTGCCGGGCTCCGCGGGCTGCTAGGAGGACGCGCGGCGCACTaGGGGCCGGGAACGTGCTGCGCGCTGACACCGGGTCAGCTCCCT +
Preference number: 5 (lower is better)
Translates to: HSAGLRGLLGGRAAH*GPGTCCALTPGQLP
Trigger: AGGGAGCTGACCCGGTGTCAGCGCGCAGCACGTTCCCGGCCCGCAGTGCGCCGCGCGTCCTCCTAGCAGCCCGCGGAGCCCGGCACTGTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459927.5
CDS GCA 90 bp CGCGGGCTGCTAGGAGGACGCGCGGCGCACTGCGGGCCGGGAACGTaGTGCGCGCTGACACCGGGTCAGCTCCCTGTGATGGGACTTCCT +
Preference number: 5 (lower is better)
Translates to: RGLLGGRAAHCGPGT*CALTPGQLPVMGLP
Trigger: AGGAAGTCCCATCACAGGGAGCTGACCCGGTGTCAGCGCGCAGCACGTTCCCGGCCCGCAGTGCGCCGCGCGTCCTCCTAGCAGCCCGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459927.5
CDS GCA 90 bp GGGCTGCTAGGAGGACGCGCGGCGCACTGCGGGCCGGGAACGTGCTaGGCGCTGACACCGGGTCAGCTCCCTGTGATGGGACTTCCTTTC +
Preference number: 5 (lower is better)
Translates to: GLLGGRAAHCGPGTC*ALTPGQLPVMGLPF
Trigger: GAAAGGAAGTCCCATCACAGGGAGCTGACCCGGTGTCAGCGCGCAGCACGTTCCCGGCCCGCAGTGCGCCGCGCGTCCTCCTAGCAGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459927.5
CDS CCA 90 bp CCGCTGTGTGGCTTGGGGCGAGTTCCTTGCCCACTCTGTGGCCCGTaGCCTCGTGTGGGAAGCGGGACCATCACAGTGCCGGGCTCCGCG +
Preference number: 5 (lower is better)
Translates to: PLCGLGRVPCPLCGP*PRVGSGTITVPGSA
Trigger: CGCGGAGCCCGGCACTGTGATGGTCCCGCTTCCCACACGAGGCCACGGGCCACAGAGTGGGCAAGGAACTCGCCCCAAGCCACACAGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459927.5
CDS CCA 90 bp CTCAGATCCGCTGTGTGGCTTGGGGCGAGTTCCTTGCCCACTCTGTaGCCCGTGGCCTCGTGTGGGAAGCGGGACCATCACAGTGCCGGG +
Preference number: 5 (lower is better)
Translates to: LRSAVWLGASSLPTL*PVASCGKRDHHSAG
Trigger: CCCGGCACTGTGATGGTCCCGCTTCCCACACGAGGCCACGGGCCACAGAGTGGGCAAGGAACTCGCCCCAAGCCACACAGCGGATCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459927.5
CDS GCA 90 bp TCTTCCTCTTCCTCAGATCCGCTGTGTGGCTTGGGGCGAGTTCCTTaGCCACTCTGTGGCCCGTGGCCTCGTGTGGGAAGCGGGACCATC +
Preference number: 5 (lower is better)
Translates to: SSSSSDPLCGLGRVP*PLCGPWPRVGSGTI
Trigger: GATGGTCCCGCTTCCCACACGAGGCCACGGGCCACAGAGTGGGCAAGGAACTCGCCCCAAGCCACACAGCGGATCTGAGGAAGAGGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459927.5
CDS CCA 90 bp ACTGTTCCAGAGAGTCTTCCTCTTCCTCAGATCCGCTGTGTGGCTTaGGGCGAGTTCCTTGCCCACTCTGTGGCCCGTGGCCTCGTGTGG +
Preference number: 5 (lower is better)
Translates to: TVPESLPLPQIRCVA*GEFLAHSVARGLVW
Trigger: CCACACGAGGCCACGGGCCACAGAGTGGGCAAGGAACTCGCCCCAAGCCACACAGCGGATCTGAGGAAGAGGAAGACTCTCTGGAACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459927.5
CDS CCA 90 bp TTTCCACTGTTCCAGAGAGTCTTCCTCTTCCTCAGATCCGCTGTGTaGCTTGGGGCGAGTTCCTTGCCCACTCTGTGGCCCGTGGCCTCG +
Preference number: 5 (lower is better)
Translates to: FPLFQRVFLFLRSAV*LGASSLPTLWPVAS
Trigger: CGAGGCCACGGGCCACAGAGTGGGCAAGGAACTCGCCCCAAGCCACACAGCGGATCTGAGGAAGAGGAAGACTCTCTGGAACAGTGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459927.5
CDS GCA 90 bp GGGCGCGGCCGCGGGGTCTCGTTTGGCGGCATCAAGTGGCAATCTTaGAGCCAGGAGCAGAAATCCCAGGAAATAGTAGAGACATTCCAT +
Preference number: 5 (lower is better)
Translates to: GRGRGVSFGGIKWQS*SQEQKSQEIVETFH
Trigger: ATGGAATGTCTCTACTATTTCCTGGGATTTCTGCTCCTGGCTGCAAGATTGCCACTTGATGCCGCCAAACGAGACCCCGCGGCCGCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459927.5
CDS CCA 90 bp CCAGCTTCATCCATGTTCCTAAAGAAGGGGTGGGTTTTGAAGGTCTaGGTGGTGGTGGCGGTGGCGGACAAGGTCCTGGTGCTGCAGCTT +
Preference number: 5 (lower is better)
Translates to: PASSMFLKKGWVLKV*VVVAVADKVLVLQL
Trigger: AAGCTGCAGCACCAGGACCTTGTCCGCCACCGCCACCACCACCCAGACCTTCAAAACCCACCCCTTCTTTAGGAACATGGATGAAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647578.1
CDS CCA 90 bp TCACCGCAAATGTTATATTTGAGCCCACGAGGGCTGGTGAGTCACTaGTCAGGACCGCCTGCACACGGCCTCCCTTCCAGGAGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: SPQMLYLSPRGLVSH*SGPPAHGLPSRSFS
Trigger: GGAAAAACTCCTGGAAGGGAGGCCGTGTGCAGGCGGTCCTGACCAGTGACTCACCAGCCCTCGTGGGCTCAAATATAACATTTGCGGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000409458.3
ENST00000465673.5
ENST00000487890.5
ENST00000492512.1
ENST00000492858.6
ENST00000647578.1
CDS CCA 90 bp GTTCCTCTTGGGGAGGACTGCGTGGATGGACTCTGTGTTCATACCTaGGTCAGATGGGATGGTCAGAGCAGGACAGGCAAAGAGTGGGGA +
Preference number: 5 (lower is better)
Translates to: VPLGEDCVDGLCVHT*VRWDGQSRTGKEWG
Trigger: TCCCCACTCTTTGCCTGTCCTGCTCTGACCATCCCATCTGACCCAGGTATGAACACAGAGTCCATCCACGCAGTCCTCCCCAAGAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492858.6
CDS CCA 90 bp TGGCCCCTACTTCCTCCAAGTTCCTCTTGGGGAGGACTGCGTGGATaGACTCTGTGTTCATACCTGGGTCAGATGGGATGGTCAGAGCAG +
Preference number: 5 (lower is better)
Translates to: WPLLPPSSSWGGLRG*TLCSYLGQMGWSEQ
Trigger: CTGCTCTGACCATCCCATCTGACCCAGGTATGAACACAGAGTCCATCCACGCAGTCCTCCCCAAGAGGAACTTGGAGGAAGTAGGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492858.6
CDS CCA 90 bp TCCATGGCCCCTACTTCCTCCAAGTTCCTCTTGGGGAGGACTGCGTaGATGGACTCTGTGTTCATACCTGGGTCAGATGGGATGGTCAGA +
Preference number: 5 (lower is better)
Translates to: SMAPTSSKFLLGRTA*MDSVFIPGSDGMVR
Trigger: TCTGACCATCCCATCTGACCCAGGTATGAACACAGAGTCCATCCACGCAGTCCTCCCCAAGAGGAACTTGGAGGAAGTAGGGGCCATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492858.6
CDS GCA 90 bp GAAATCCATGGCCCCTACTTCCTCCAAGTTCCTCTTGGGGAGGACTaGGTGGATGGACTCTGTGTTCATACCTGGGTCAGATGGGATGGT +
Preference number: 5 (lower is better)
Translates to: EIHGPYFLQVPLGED*VDGLCVHTWVRWDG
Trigger: ACCATCCCATCTGACCCAGGTATGAACACAGAGTCCATCCACGCAGTCCTCCCCAAGAGGAACTTGGAGGAAGTAGGGGCCATGGATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492858.6
CDS CCA 90 bp AGCAGACACATCTCATCCACATCCACAGGGCTGCAGACTGTGTTCTaGGTGATCTCGCAGGTGGGGTCAGAAATGATGGTACAGACCTCC +
Preference number: 5 (lower is better)
Translates to: SRHISSTSTGLQTVF*VISQVGSEMMVQTS
Trigger: GGAGGTCTGTACCATCATTTCTGACCCCACCTGCGAGATCACCCAGAACACAGTCTGCAGCCCTGTGGATGTGGATGAGATGTGTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000479625.1
ENST00000647578.1
CDS CCA 90 bp GGCCGGAGGCTGTCCAACCCTCCCCCAACCACTGTCTGGCAAGAATaGGTTGCAATTGCAATGGAAAAGAAGCTTCACAAGAGAAGGGCA +
Preference number: 5 (lower is better)
Translates to: GRRLSNPPPTTVWQE*VAIAMEKKLHKRRA
Trigger: TGCCCTTCTCTTGTGAAGCTTCTTTTCCATTGCAATTGCAACCCATTCTTGCCAGACAGTGGTTGGGGGAGGGTTGGACAGCCTCCGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474157.1
CDS CCA 90 bp AATTCTCACGGACGCAGGCACTCAAGGTTTAACTCTGAATTCCTCTaGGCCCGTCCACCAAGAGCAACAGTGTTCTTCTGGCATCTGTGG +
Preference number: 5 (lower is better)
Translates to: NSHGRRHSRFNSEFL*ARPPRATVFFWHLW
Trigger: CCACAGATGCCAGAAGAACACTGTTGCTCTTGGTGGACGGGCCCAGAGGAATTCAGAGTTAAACCTTGAGTGCCTGCGTCCGTGAGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381990.6
ENST00000409458.3
ENST00000647578.1
CDS CCA 90 bp TTGTTCTGTGGCCGGAGGCTGTCCAACCCTCCCCCAACCACTGTCTaGCAAGAATGGGTTGCAATTGCAATGGAAAAGAAGCTTCACAAG +
Preference number: 5 (lower is better)
Translates to: LFCGRRLSNPPPTTV*QEWVAIAMEKKLHK
Trigger: CTTGTGAAGCTTCTTTTCCATTGCAATTGCAACCCATTCTTGCCAGACAGTGGTTGGGGGAGGGTTGGACAGCCTCCGGCCACAGAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474157.1
CDS-3UTR CAA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGCGTGGGAATGCTCCCTaGGCAGGTCACGACAAAGTC +
Preference number: 5 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMRGNAP*AGHDKV
Trigger: GACTTTGTCGTGACCTGCCAAGGGAGCATTCCCACG...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGCTCAGCTCCAGGGGGTaGTCACCAGCAGGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: KRLIATPAHLTSMALKSELSSRG*SPAGPG
Trigger: CCCAGGACCTGCTGGTGACAACCCCCTGGAGCTGAG...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381990.6
CDS-3UTR CAA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAAGAAGGGGTGGGTTTaGAAGGTCTGGGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMKKGWV*KVWVVV
Trigger: CACCACCACCCAGACCTTCAAAACCCACCCCTTCTT...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp ACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGTGTCGTGGGAATGCTCCCTaGGCAGGTCACGACAAAGTC +
Preference number: 5 (lower is better)
Translates to: TSYHRLGPVIVPSGVHECRGNAP*AGHDKV
Trigger: GACTTTGTCGTGACCTGCCAAGGGAGCATTCCCACG...ACACTCATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS CCA 90 bp AGGGAGCTTTCAGGCCATGGCACCGGCATCAGGACGTCTGTCATCTaGATGATGTTAACCTCTAAGATTCCCTCTACAATTGTGATGGTG +
Preference number: 5 (lower is better)
Translates to: RELSGHGTGIRTSVI*MMLTSKIPSTIVMV
Trigger: CACCATCACAATTGTAGAGGGAATCTTAGAGGTTAACATCATCCAGATGACAGACGTCCTGATGCCGGTGCCATGGCCTGAAAGCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000479625.1
ENST00000647578.1
CDS-3UTR CAA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTGACGTTATGATGGCTTaGGCCGGTGCCATTTTCCCC +
Preference number: 5 (lower is better)
Translates to: FLSLASVHIIPQAWACYCDVMMA*AGAIFP
Trigger: GGGGAAAATGGCACCGGCCAAAGCCATCATAACGTC...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGGTATCCCGCCTCTTCTaGCAGTTAACCTGGGTTAGG +
Preference number: 5 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMVSRLF*QLTWVR
Trigger: CCTAACCCAGGTTAACTGCAAGAAGAGGCGGGATAC...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGCTCAGCTCCAGGGGGTaGTCACCAGCAGGTCCTGTG +
Preference number: 5 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLLSSRG*SPAGPV
Trigger: CACAGGACCTGCTGGTGACAACCCCCTGGAGCTGAG...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647578.1
CDS GCA 90 bp GCCCAGCACATCATGAAATCGTTTGGCGGCATCAAGTGGCAATCTTaGAGCCAGGAGCAGAAATCCCAGGAAATAGTAGAGACATTCCAT +
Preference number: 5 (lower is better)
Translates to: AQHIMKSFGGIKWQS*SQEQKSQEIVETFH
Trigger: ATGGAATGTCTCTACTATTTCCTGGGATTTCTGCTCCTGGCTGCAAGATTGCCACTTGATGCCGCCAAACGATTTCATGATGTGCTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000409458.3
ENST00000647578.1
CDS CCA 90 bp GCCTCCAGATTGGAGACCCCATTTCATGTGAGGTCTCCACCCTTTTaGATGGAAGCTGGACATAGTTTAGTTGGTGGAGTTGCTTTGTTC +
Preference number: 5 (lower is better)
Translates to: ASRLETPFHVRSPPF*MEAGHSLVGGVALF
Trigger: GAACAAAGCAACTCCACCAACTAAACTATGTCCAGCTTCCATCCAAAAGGGTGGAGACCTCACATGAAATGGGGTCTCCAATCTGGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474157.1
CDS-3UTR CAA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTCCGCAAATGTTATATTaGAGCCCACGAGGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: FLSLASVHIIPQAWACYCPQMLY*SPRGLV
Trigger: CACCAGCCCTCGTGGGCTCAAATATAACATTTGCGG...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGGGCCCAAGTGTCACATaGGCTGTGTTCACAGAAACT +
Preference number: 5 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMGPSVT*AVFTET
Trigger: AGTTTCTGTGAACACAGCCAATGTGACACTTGGGCC...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTACGTCCCAGACCCATaGAAGGTTCGTCTCACAGTC +
Preference number: 5 (lower is better)
Translates to: FLSLASVHIIPQAWACYCYVPDP*KVRLTV
Trigger: GACTGTGAGACGAACCTTCAATGGGTCTGGGACGTA...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS TCA 90 bp CAGCCAGGAGCAGAAATCCCAGGAAATAGTAGAGACATTCCATGCTaGATTCTCACGGACGCAGGCACTCAAGGTTTAACTCTGAATTCC +
Preference number: 5 (lower is better)
Translates to: QPGAEIPGNSRDIPC*ILTDAGTQGLTLNS
Trigger: GGAATTCAGAGTTAAACCTTGAGTGCCTGCGTCCGTGAGAATTCAGCATGGAATGTCTCTACTATTTCCTGGGATTTCTGCTCCTGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000409458.3
ENST00000459927.5
ENST00000474157.1
ENST00000487890.5
ENST00000647578.1
CDS TCA 90 bp CGTAGGAACCAAAAACTTACTTGTACACCAAGAGGGAGATCACAGTaGCAAATATGGCCAAGCAGCCAACGGAGATCAGGGCACTGTTTG +
Preference number: 5 (lower is better)
Translates to: RRNQKLTCTPRGRSQ*QIWPSSQRRSGHCL
Trigger: CAAACAGTGCCCTGATCTCCGTTGGCTGCTTGGCCATATTTGTCACTGTGATCTCCCTCTTGGTGTACAAGTAAGTTTTTGGTTCCTACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470994.1
CDS TCA 90 bp GTCTTCCACCTAGAGGACATGCCGCTTATAATGCCATTAAATAAATaGGGAAGGGAGCCGTCACAGAAGATATATGGCTCCCTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: VFHLEDMPLIMPLNK*GREPSQKIYGSLWA
Trigger: AGCCCAGAGGGAGCCATATATCTTCTGTGACGGCTCCCTTCCTCATTTATTTAATGGCATTATAAGCGGCATGTCCTCTAGGTGGAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468723.1
CDS GCA 90 bp GAAGAACTTCAGTCCAACCTGTTTGGCGGCATCAAGTGGCAATCTTaGAGCCAGGAGCAGAAATCCCAGGAAATAGTAGAGACATTCCAT +
Preference number: 5 (lower is better)
Translates to: EELQSNLFGGIKWQS*SQEQKSQEIVETFH
Trigger: ATGGAATGTCTCTACTATTTCCTGGGATTTCTGCTCCTGGCTGCAAGATTGCCACTTGATGCCGCCAAACAGGTTGGACTGAAGTTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474157.1
CDS GCA 90 bp AGTCTTCCTCTTCCTCAGATGTTTGGCGGCATCAAGTGGCAATCTTaGAGCCAGGAGCAGAAATCCCAGGAAATAGTAGAGACATTCCAT +
Preference number: 5 (lower is better)
Translates to: SLPLPQMFGGIKWQS*SQEQKSQEIVETFH
Trigger: ATGGAATGTCTCTACTATTTCCTGGGATTTCTGCTCCTGGCTGCAAGATTGCCACTTGATGCCGCCAAACATCTGAGGAAGAGGAAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487890.5
CDS-3UTR CAA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGGACGTTATGATGGCTTaGGCCGGTGCCATTTTCCCC +
Preference number: 5 (lower is better)
Translates to: KRLIATPAHLTSMALKSEDVMMA*AGAIFP
Trigger: GGGGAAAATGGCACCGGCCAAAGCCATCATAACGTC...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp ACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGTGTGGCCCAAGTGTCACATaGGCTGTGTTCACAGAAACT +
Preference number: 5 (lower is better)
Translates to: TSYHRLGPVIVPSGVHECGPSVT*AVFTET
Trigger: AGTTTCTGTGAACACAGCCAATGTGACACTTGGGCC...ACACTCATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGCTCAGCTCCAGGGGGTaGTCACCAGCAGGTCCTAAA +
Preference number: 5 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLLSSRG*SPAGPK
Trigger: TTTAGGACCTGCTGGTGACAACCCCCTGGAGCTGAG...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258733.9
CDS-3UTR CAA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTAAGACACTCAGGCCTTaGCTTCTGACCACATTCCCA +
Preference number: 5 (lower is better)
Translates to: FLSLASVHIIPQAWACYCKTLRP*LLTTFP
Trigger: TGGGAATGTGGTCAGAAGCAAAGGCCTGAGTGTCTT...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTGGCTTGGGCCTGTTATaGTTCCATCAGGAGTTCATG +
Preference number: 5 (lower is better)
Translates to: FLSLASVHIIPQAWACYCGLGLL*FHQEFM
Trigger: CATGAACTCCTGATGGAACAATAACAGGCCCAAGCC...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGCATCATACCACAGGCTaGGGCCTGTTATTGTTCCAT +
Preference number: 5 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMHHTTG*GLLLFH
Trigger: ATGGAACAATAACAGGCCCAAGCCTGTGGTATGATG...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS TCA 90 bp GCTGTAGTTTCAGCCTTCCCAACAGTTTGCAGAAGAAGAGATGAGTaGGCCAGAGATGAAAGCTTCCTGAAGAACTTCAGTCCAACCTGT +
Preference number: 5 (lower is better)
Translates to: AVVSAFPTVCRRRDE*ARDESFLKNFSPTC
Trigger: ACAGGTTGGACTGAAGTTCTTCAGGAAGCTTTCATCTCTGGCTCACTCATCTCTTCTTCTGCAAACTGTTGGGAAGGCTGAAACTACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474157.1
CDS GCA 90 bp ATCTGTTACCACGTACACATCTTTCACTTGTGCGATGGGAACATATaGCCGTCCATGTCTTCTGTAGACAGTCACTTCCATGAGTTGAGG +
Preference number: 5 (lower is better)
Translates to: ICYHVHIFHLCDGNI*PSMSSVDSHFHELR
Trigger: CCTCAACTCATGGAAGTGACTGTCTACAGAAGACATGGACGGGCATATGTTCCCATCGCACAAGTGAAAGATGTGTACGTGGTAACAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS CCA 90 bp CAGGAATCTGATCTGTTACCACGTACACATCTTTCACTTGTGCGATaGGAACATATGCCCGTCCATGTCTTCTGTAGACAGTCACTTCCA +
Preference number: 5 (lower is better)
Translates to: QESDLLPRTHLSLVR*EHMPVHVFCRQSLP
Trigger: TGGAAGTGACTGTCTACAGAAGACATGGACGGGCATATGTTCCCATCGCACAAGTGAAAGATGTGTACGTGGTAACAGATCAGATTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGGACGTTATGATGGCTTaGGCCGGTGCCATTTTCCCC +
Preference number: 5 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLDVMMA*AGAIFP
Trigger: GGGGAAAATGGCACCGGCCAAAGCCATCATAACGTC...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGAAGAAGGGGTGGGTTTaGAAGGTCTGGGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLKKGWV*KVWVVV
Trigger: CACCACCACCCAGACCTTCAAAACCCACCCCTTCTT...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGAGATCAGGGCACTGTTaGCCATCCTTAAAGGCGAGG +
Preference number: 5 (lower is better)
Translates to: KRLIATPAHLTSMALKSERSGHC*PSLKAR
Trigger: CCTCGCCTTTAAGGATGGCAAACAGTGCCCTGATCT...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGGTATCCCGCCTCTTCTaGCAGTTAACCTGGGTTAGG +
Preference number: 5 (lower is better)
Translates to: KRLIATPAHLTSMALKSEVSRLF*QLTWVR
Trigger: CCTAACCCAGGTTAACTGCAAGAAGAGGCGGGATAC...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTGCCAAGCAAAGTAGGTaGTCACCAAAATACTCCCAC +
Preference number: 5 (lower is better)
Translates to: FLSLASVHIIPQAWACYCAKQSR*SPKYSH
Trigger: GTGGGAGTATTTTGGTGACAACCTACTTTGCTTGGC...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS TCA 90 bp TTGAGGCCCAAGTGTCACATTGGCTGTGTTCACAGAAACTCTCACTaGACATCGTCCCAATTTCTGGAAATACTGACCAAGTGTGTGGAA +
Preference number: 5 (lower is better)
Translates to: LRPKCHIGCVHRNSH*TSSQFLEILTKCVE
Trigger: TTCCACACACTTGGTCAGTATTTCCAGAAATTGGGACGATGTTCAGTGAGAGTTTCTGTGAACACAGCCAATGTGACACTTGGGCCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS GCA 90 bp AAACACAGGAATCTGATCTGTTACCACGTACACATCTTTCACTTGTaGGATGGGAACATATGCCCGTCCATGTCTTCTGTAGACAGTCAC +
Preference number: 5 (lower is better)
Translates to: KHRNLICYHVHIFHL*DGNICPSMSSVDSH
Trigger: GTGACTGTCTACAGAAGACATGGACGGGCATATGTTCCCATCGCACAAGTGAAAGATGTGTACGTGGTAACAGATCAGATTCCTGTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGCATCAAGTGGCAATCTaGCAGCCAGGAGCAGAAATC +
Preference number: 5 (lower is better)
Translates to: KRLIATPAHLTSMALKSEHQVAI*QPGAEI
Trigger: GATTTCTGCTCCTGGCTGCAAGATTGCCACTTGATG...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp TTTATCTCTCACTGTTCACTCATGCTAAGGAAAGTTAGCAGGGTGACTGTTATTGACGTTATGATGGCTTaGGCCGGTGCCATTTTCCCC +
Preference number: 5 (lower is better)
Translates to: FISHCSLMLRKVSRVTVIDVMMA*AGAIFP
Trigger: GGGGAAAATGGCACCGGCCAAAGCCATCATAACGTC...AATAACAGTCACCCTGCTAACTTTCCTTAGCATGAGTGAACAGTGAGAGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409458.3
CDS-3UTR CAA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGGGCCCAAGTGTCACATaGGCTGTGTTCACAGAAACT +
Preference number: 5 (lower is better)
Translates to: KRLIATPAHLTSMALKSEGPSVT*AVFTET
Trigger: AGTTTCTGTGAACACAGCCAATGTGACACTTGGGCC...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp ACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGTGTGTACACATCTTTCACTaGTGCGATGGGAACATATGC +
Preference number: 5 (lower is better)
Translates to: TSYHRLGPVIVPSGVHECVHIFH*CDGNIC
Trigger: GCATATGTTCCCATCGCACAAGTGAAAGATGTGTAC...ACACTCATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTATAATGGGGAGATCTTaGAGGAAGGTTTCGTCGGAT +
Preference number: 5 (lower is better)
Translates to: FLSLASVHIIPQAWACYCIMGRS*RKVSSD
Trigger: ATCCGACGAAACCTTCCTCAAAGATCTCCCCATTAT...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp ACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGTGTATAATGGGGAGATCTTaGAGGAAGGTTTCGTCGGAT +
Preference number: 5 (lower is better)
Translates to: TSYHRLGPVIVPSGVHECIMGRS*RKVSSD
Trigger: ATCCGACGAAACCTTCCTCAAAGATCTCCCCATTAT...ACACTCATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAATTGTGATGGTGGCTaGAAAGTGGCCATATCTGTT +
Preference number: 5 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMNCDGG*KVAISV
Trigger: AACAGATATGGCCACTTTCAAGCCACCATCACAATT...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCACGTGGGAATGCTCCCTaGGCAGGTCACGACAAAGTC +
Preference number: 5 (lower is better)
Translates to: IQLAWNMILETGLHWLYARGNAP*AGHDKV
Trigger: GACTTTGTCGTGACCTGCCAAGGGAGCATTCCCACG...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGTACGTCCCAGACCCATaGAAGGTTCGTCTCACAGTC +
Preference number: 5 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLYVPDP*KVRLTV
Trigger: GACTGTGAGACGAACCTTCAATGGGTCTGGGACGTA...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGAGATCAGGGCACTGTTaGCCATCCTTAAAGGCGAGG +
Preference number: 5 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLRSGHC*PSLKAR
Trigger: CCTCGCCTTTAAGGATGGCAAACAGTGCCCTGATCT...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGGGCTTGGGCCTGTTATaGTTCCATCAGGAGTTCATG +
Preference number: 5 (lower is better)
Translates to: KRLIATPAHLTSMALKSEGLGLL*FHQEFM
Trigger: CATGAACTCCTGATGGAACAATAACAGGCCCAAGCC...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGTGTCCTTGTGATAGTTaGCTCAGAATGATGGTTTCC +
Preference number: 5 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMCPCDS*LRMMVS
Trigger: GGAAACCATCATTCTGAGCAAACTATCACAAGGACA...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647578.1
CDS-3UTR CAA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTATTGGCATCTTCCTTTaGGCATCTAGGGAATATCAG +
Preference number: 5 (lower is better)
Translates to: FLSLASVHIIPQAWACYCIGIFL*ASREYQ
Trigger: CTGATATTCCCTAGATGCCAAAAGGAAGATGCCAAT...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp ACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGTGTATTGGCATCTTCCTTTaGGCATCTAGGGAATATCAG +
Preference number: 5 (lower is better)
Translates to: TSYHRLGPVIVPSGVHECIGIFL*ASREYQ
Trigger: CTGATATTCCCTAGATGCCAAAAGGAAGATGCCAAT...ACACTCATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGAGTCACTTCCATGAGTaGAGGCCCAAGTGTCACATT +
Preference number: 5 (lower is better)
Translates to: KRLIATPAHLTSMALKSESHFHE*RPKCHI
Trigger: AATGTGACACTTGGGCCTCAACTCATGGAAGTGACT...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp TCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCATAAAGAAGGGGTGGGTTTaGAAGGTCTGGGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: SVSLEHDLRNWTTLALCIKKGWV*KVWVVV
Trigger: CACCACCACCCAGACCTTCAAAACCCACCCCTTCTT...TATGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp ACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGTGTAATTGTGATGGTGGCTaGAAAGTGGCCATATCTGTT +
Preference number: 5 (lower is better)
Translates to: TSYHRLGPVIVPSGVHECNCDGG*KVAISV
Trigger: AACAGATATGGCCACTTTCAAGCCACCATCACAATT...ACACTCATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTAATTGTGATGGTGGCTaGAAAGTGGCCATATCTGTT +
Preference number: 5 (lower is better)
Translates to: FLSLASVHIIPQAWACYCNCDGG*KVAISV
Trigger: AACAGATATGGCCACTTTCAAGCCACCATCACAATT...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGGCCAAGCAAAGTAGGTaGTCACCAAAATACTCCCAC +
Preference number: 5 (lower is better)
Translates to: KRLIATPAHLTSMALKSEAKQSR*SPKYSH
Trigger: GTGGGAGTATTTTGGTGACAACCTACTTTGCTTGGC...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTCAGGTCCTGGGGTGTTaGAATCATAAGATTTTAGAG +
Preference number: 5 (lower is better)
Translates to: FLSLASVHIIPQAWACYCQVLGC*NHKILE
Trigger: CTCTAAAATCTTATGATTCAAACACCCCAGGACCTG...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381990.6
CDS-3UTR CAA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGGAGAACATGCGGCGTTaGGTTTTCTGTCCTTGTGAT +
Preference number: 5 (lower is better)
Translates to: KRLIATPAHLTSMALKSEENMRR*VFCPCD
Trigger: ATCACAAGGACAGAAAACCAAACGCCGCATGTTCTC...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647578.1
CDS-3UTR CAA 90 bp TCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCATACCGCAAATGTTATATTaGAGCCCACGAGGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: SVSLEHDLRNWTTLALCIPQMLY*SPRGLV
Trigger: CACCAGCCCTCGTGGGCTCAAATATAACATTTGCGG...TATGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCAAGATCAGGGCACTGTTaGCCATCCTTAAAGGCGAGG +
Preference number: 5 (lower is better)
Translates to: IQLAWNMILETGLHWLYARSGHC*PSLKAR
Trigger: CCTCGCCTTTAAGGATGGCAAACAGTGCCCTGATCT...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp ACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGTGTTATTCCTTGTGTTTTTaGTACACCAAGAGGGAGATC +
Preference number: 5 (lower is better)
Translates to: TSYHRLGPVIVPSGVHECYSLCF*YTKREI
Trigger: GATCTCCCTCTTGGTGTACAAAAAACACAAGGAATA...ACACTCATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTATTCCTTGTGTTTTTaGTACACCAAGAGGGAGATC +
Preference number: 5 (lower is better)
Translates to: FLSLASVHIIPQAWACYCYSLCF*YTKREI
Trigger: GATCTCCCTCTTGGTGTACAAAAAACACAAGGAATA...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGAAGCCTTGCTAAGTaGCTTTTATCAGTTTCACAA +
Preference number: 5 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMRSLAK*LLSVSQ
Trigger: TTGTGAAACTGATAAAAGCAACTTAGCAAGGCTTCT...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp TGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGAAACTGGACTACATaGGCTTTATGCATACAGTTA +
Preference number: 5 (lower is better)
Translates to: CAHHTTGLGLLLFHQEFMRNWTT*ALCIQL
Trigger: TAACTGTATGCATAAAGCCAATGTAGTCCAGTTTCT...CATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp TTTCTGAGTCTAGCAAGTGTGCACATCATACCACAGGCTTGGGCCTGTTATTGTTGGGATTCAGTTAGCTaGGAACATGATCTTAGAAAC +
Preference number: 5 (lower is better)
Translates to: FLSLASVHIIPQAWACYCWDSVS*EHDLRN
Trigger: GTTTCTAAGATCATGTTCCAAGCTAACTGAATCCCA...ACAATAACAGGCCCAAGCCTGTGGTATGATGTGCACACTTGCTAGACTCAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGCATCATACCACAGGCTaGGGCCTGTTATTGTTCCAT +
Preference number: 5 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLHHTTG*GLLLFH
Trigger: ATGGAACAATAACAGGCCCAAGCCTGTGGTATGATG...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp TTCTCTCTTTTTAACTCTTCGGTGTCCTGGAGATTTGGCAAGGTTAACCAAGATCGGTGTCCTGGAGATTaGGCAAGGTTAACCAAGATT +
Preference number: 5 (lower is better)
Translates to: FSLFNSSVSWRFGKVNQDRCPGD*ARLTKI
Trigger: AATCTTGGTTAACCTTGCCAAATCTCCAGGACACCG...ATCTTGGTTAACCTTGCCAAATCTCCAGGACACCGAAGAGTTAAAAAGAGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409458.3
CDS-3UTR CAA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCACATCAAGTGGCAATCTaGCAGCCAGGAGCAGAAATC +
Preference number: 5 (lower is better)
Translates to: IQLAWNMILETGLHWLYAHQVAI*QPGAEI
Trigger: GATTTCTGCTCCTGGCTGCAAGATTGCCACTTGATG...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp TTTAACTCTTCGGTGTCCTGGAGATTTGGCAAGGTTAACCAAGATTTCATTTTTCATCAAGTGGCAATCTaGCAGCCAGGAGCAGAAATC +
Preference number: 5 (lower is better)
Translates to: FNSSVSWRFGKVNQDFIFHQVAI*QPGAEI
Trigger: GATTTCTGCTCCTGGCTGCAAGATTGCCACTTGATG...AAAAATGAAATCTTGGTTAACCTTGCCAAATCTCCAGGACACCGAAGAGTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409458.3
CDS-3UTR CAA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGATAATGGGGAGATCTTaGAGGAAGGTTTCGTCGGAT +
Preference number: 5 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLIMGRS*RKVSSD
Trigger: ATCCGACGAAACCTTCCTCAAAGATCTCCCCATTAT...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCAAAGACACTCAGGCCTTaGCTTCTGACCACATTCCCA +
Preference number: 5 (lower is better)
Translates to: IQLAWNMILETGLHWLYAKTLRP*LLTTFP
Trigger: TGGGAATGTGGTCAGAAGCAAAGGCCTGAGTGTCTT...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp ACATCATACCACAGGCTTGGGCCTGTTATTGTTCCATCAGGAGTTCATGAGTGTTTAAATTCTTGGTTTTaGAGTAGCGGATCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: TSYHRLGPVIVPSGVHECLNSWF*SSGSFS
Trigger: GGAAAAGGATCCGCTACTCAAAAACCAAGAATTTAA...ACACTCATGAACTCCTGATGGAACAATAACAGGCCCAAGCCTGTGGTATGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS TCA 90 bp GACATCAAACATAATGGGGAGATCTTTGAGGAAGGTTTCGTCGGATaGATTTCGATCGTTCTTCTGGAACATAGTCACAAACACAGGAAT +
Preference number: 5 (lower is better)
Translates to: DIKHNGEIFEEGFVG*ISIVLLEHSHKHRN
Trigger: ATTCCTGTGTTTGTGACTATGTTCCAGAAGAACGATCGAAATTCATCCGACGAAACCTTCCTCAAAGATCTCCCCATTATGTTTGATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGATTGGCATCTTCCTTTaGGCATCTAGGGAATATCAG +
Preference number: 5 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLIGIFL*ASREYQ
Trigger: CTGATATTCCCTAGATGCCAAAAGGAAGATGCCAAT...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCAAGTCACTTCCATGAGTaGAGGCCCAAGTGTCACATT +
Preference number: 5 (lower is better)
Translates to: IQLAWNMILETGLHWLYASHFHE*RPKCHI
Trigger: AATGTGACACTTGGGCCTCAACTCATGGAAGTGACT...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp AAAAGGTTAATAGCCACTCCAGCACATCTCACATCAATGGCACTGAAAAGTGAGTGGGATTCAGTTAGCTaGGAACATGATCTTAGAAAC +
Preference number: 5 (lower is better)
Translates to: KRLIATPAHLTSMALKSEWDSVS*EHDLRN
Trigger: GTTTCTAAGATCATGTTCCAAGCTAACTGAATCCCA...CTCACTTTTCAGTGCCATTGATGTGAGATGTGCTGGAGTGGCTATTAACCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp TCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCATACATCATACCACAGGCTaGGGCCTGTTATTGTTCCAT +
Preference number: 5 (lower is better)
Translates to: SVSLEHDLRNWTTLALCIHHTTG*GLLLFH
Trigger: ATGGAACAATAACAGGCCCAAGCCTGTGGTATGATG...TATGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCAGCCAAGCAAAGTAGGTaGTCACCAAAATACTCCCAC +
Preference number: 5 (lower is better)
Translates to: IQLAWNMILETGLHWLYAAKQSR*SPKYSH
Trigger: GTGGGAGTATTTTGGTGACAACCTACTTTGCTTGGC...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS TCA 90 bp GAAATCCTAGGGTCATCTTTAGTAGAAATCAAGATTCACATCTTTTaGTTCCCAGGACAAGGACAAGTTCTTTCCACTGTTCCAGAGAGT +
Preference number: 5 (lower is better)
Translates to: EILGSSLVEIKIHIF*FPGQGQVLSTVPES
Trigger: ACTCTCTGGAACAGTGGAAAGAACTTGTCCTTGTCCTGGGAATCAAAAGATGTGAATCTTGATTTCTACTAAAGATGACCCTAGGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459927.5
ENST00000487890.5
ENST00000492512.1
CDS GCA 90 bp CATTTAATTGATTGTGCTCCCTCATGTAAGCAGAAGGTCTTTCATTaGCCAGCACATCATGAAATCCTAGGGTCATCTTTAGTAGAAATC +
Preference number: 5 (lower is better)
Translates to: HLIDCAPSCKQKVFH*PAHHEILGSSLVEI
Trigger: GATTTCTACTAAAGATGACCCTAGGATTTCATGATGTGCTGGGCAATGAAAGACCTTCTGCTTACATGAGGGAGCACAATCAATTAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487890.5
ENST00000492512.1
CDS-3UTR CAA 90 bp TTTATCTCTCACTGTTCACTCATGCTAAGGAAAGTTAGCAGGGTGACTGTTATTATTGGCATCTTCCTTTaGGCATCTAGGGAATATCAG +
Preference number: 5 (lower is better)
Translates to: FISHCSLMLRKVSRVTVIIGIFL*ASREYQ
Trigger: CTGATATTCCCTAGATGCCAAAAGGAAGATGCCAAT...AATAACAGTCACCCTGCTAACTTTCCTTAGCATGAGTGAACAGTGAGAGATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409458.3
CDS-3UTR CAA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCAGTACACATCTTTCACTaGTGCGATGGGAACATATGC +
Preference number: 5 (lower is better)
Translates to: IQLAWNMILETGLHWLYAVHIFH*CDGNIC
Trigger: GCATATGTTCCCATCGCACAAGTGAAAGATGTGTAC...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGTGGGATTCAGTTAGCTaGGAACATGATCTTAGAAAC +
Preference number: 5 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLWDSVS*EHDLRN
Trigger: GTTTCTAAGATCATGTTCCAAGCTAACTGAATCCCA...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp ATTGTTCCATCAGGAGTTCATGAGTGTGTATTGAAGTGGGATTCAGTTAGCTTGTTAAATTCTTGGTTTTaGAGTAGCGGATCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: IVPSGVHECVLKWDSVSLLNSWF*SSGSFS
Trigger: GGAAAAGGATCCGCTACTCAAAAACCAAGAATTTAA...CAAGCTAACTGAATCCCACTTCAATACACACTCATGAACTCCTGATGGAACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp ATTCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCAGTTCATGAGTGTGTATaGAAGTGGGATTCAGTTAGC +
Preference number: 5 (lower is better)
Translates to: IQLAWNMILETGLHWLYAVHECV*KWDSVS
Trigger: GCTAACTGAATCCCACTTCAATACACACTCATGAAC...TGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS-3UTR CAA 90 bp TCAGTTAGCTTGGAACATGATCTTAGAAACTGGACTACATTGGCTTTATGCATAAGAAGCCTTGCTAAGTaGCTTTTATCAGTTTCACAA +
Preference number: 5 (lower is better)
Translates to: SVSLEHDLRNWTTLALCIRSLAK*LLSVSQ
Trigger: TTGTGAAACTGATAAAAGCAACTTAGCAAGGCTTCT...TATGCATAAAGCCAATGTAGTCCAGTTTCTAAGATCATGTTCCAAGCTAACTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS GCA 72 bp GGGCTCCGCGGGCTGCTAGGAGGACGCGCGGCGCACTaGGGGCCGGGAACGTGCTGCGCGCTGACACCGGGT +
Preference number: 6 (lower is better)
Translates to: GLRGLLGGRAAH*GPGTCCALTPG
Trigger: ACCCGGTGTCAGCGCGCAGCACGTTCCCGGCCCGCAGTGCGCCGCGCGTCCTCCTAGCAGCCCGCGGAGCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459927.5
CDS GCA 72 bp GCCCGTGGCCTCGTGTGGGAAGCGGGACCATCACAGTaGCGGGCTCCGCGGGCTGCTAGGAGGACGCGCGGC +
Preference number: 6 (lower is better)
Translates to: ARGLVWEAGPSQ*RAPRAARRTRG
Trigger: GCCGCGCGTCCTCCTAGCAGCCCGCGGAGCCCGGCACTGTGATGGTCCCGCTTCCCACACGAGGCCACGGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459927.5
CDS GCA 72 bp CTAGGAGGACGCGCGGCGCACTGCGGGCCGGGAACGTaGTGCGCGCTGACACCGGGTCAGCTCCCTGTGATG +
Preference number: 6 (lower is better)
Translates to: LGGRAAHCGPGT*CALTPGQLPVM
Trigger: CATCACAGGGAGCTGACCCGGTGTCAGCGCGCAGCACGTTCCCGGCCCGCAGTGCGCCGCGCGTCCTCCTAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459927.5
CDS GCA 72 bp CCCACGAGGGCTGGTGAGTCACTGGTCAGGACCGCCTaGACACGGCCTCCCTTCCAGGAGTTTTTCCACCTC +
Preference number: 6 (lower is better)
Translates to: PTRAGESLVRTA*TRPPFQEFFHL
Trigger: GAGGTGGAAAAACTCCTGGAAGGGAGGCCGTGTGCAGGCGGTCCTGACCAGTGACTCACCAGCCCTCGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000409458.3
ENST00000465673.5
ENST00000487890.5
ENST00000492512.1
ENST00000492858.6
ENST00000647578.1
CDS CAA 90 bp GTCTTCCTCTTCCTCAGATCCGCTGTGTGGCTTGGGGCGAGTTCCTaGCCCACTCTGTGGCCCGTGGCCTCGTGTGGGAAGCGGGACCAT +
Preference number: 6 (lower is better)
Translates to: VFLFLRSAVWLGASS*PTLWPVASCGKRDH
Trigger: ATGGTCCCGCTTCCCACACGAGGCCACGGGCCACAGAGTGGGCAAGGAACTCGCCCCAAGCCACACAGCGGATCTGAGGAAGAGGAAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459927.5
CDS CCA 72 bp GAGAGTCTTCCTCTTCCTCAGATCCGCTGTGTGGCTTaGGGCGAGTTCCTTGCCCACTCTGTGGCCCGTGGC +
Preference number: 6 (lower is better)
Translates to: ESLPLPQIRCVA*GEFLAHSVARG
Trigger: GCCACGGGCCACAGAGTGGGCAAGGAACTCGCCCCAAGCCACACAGCGGATCTGAGGAAGAGGAAGACTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459927.5
CDS CAA 90 bp CACTGTTCCAGAGAGTCTTCCTCTTCCTCAGATCCGCTGTGTGGCTaGGGGCGAGTTCCTTGCCCACTCTGTGGCCCGTGGCCTCGTGTG +
Preference number: 6 (lower is better)
Translates to: HCSRESSSSSDPLCG*GRVPCPLCGPWPRV
Trigger: CACACGAGGCCACGGGCCACAGAGTGGGCAAGGAACTCGCCCCAAGCCACACAGCGGATCTGAGGAAGAGGAAGACTCTCTGGAACAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459927.5
CDS GCA 72 bp GGGTGGTGGTGGCGGTGGCGGACAAGGTCCTGGTGCTaGAGCTTTCACAGTGAGGTTAAGGCTGAAGGTTCC +
Preference number: 6 (lower is better)
Translates to: GWWWRWRTRSWC*SFHSEVKAEGS
Trigger: GGAACCTTCAGCCTTAACCTCACTGTGAAAGCTGCAGCACCAGGACCTTGTCCGCCACCGCCACCACCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS CAA 72 bp AGAGAGTCTTCCTCTTCCTCAGATCCGCTGTGTGGCTaGGGGCGAGTTCCTTGCCCACTCTGTGGCCCGTGG +
Preference number: 6 (lower is better)
Translates to: RESSSSSDPLCG*GRVPCPLCGPW
Trigger: CCACGGGCCACAGAGTGGGCAAGGAACTCGCCCCAAGCCACACAGCGGATCTGAGGAAGAGGAAGACTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459927.5
CDS GCA 72 bp TCTGGGTGGTGGTGGCGGTGGCGGACAAGGTCCTGGTaGTGCAGCTTTCACAGTGAGGTTAAGGCTGAAGGT +
Preference number: 6 (lower is better)
Translates to: SGWWWRWRTRSW*CSFHSEVKAEG
Trigger: ACCTTCAGCCTTAACCTCACTGTGAAAGCTGCAGCACCAGGACCTTGTCCGCCACCGCCACCACCACCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS CCA 72 bp ATGTTATATTTGAGCCCACGAGGGCTGGTGAGTCACTaGTCAGGACCGCCTGCACACGGCCTCCCTTCCAGG +
Preference number: 6 (lower is better)
Translates to: MLYLSPRGLVSH*SGPPAHGLPSR
Trigger: CCTGGAAGGGAGGCCGTGTGCAGGCGGTCCTGACCAGTGACTCACCAGCCCTCGTGGGCTCAAATATAACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000409458.3
ENST00000465673.5
ENST00000487890.5
ENST00000492512.1
ENST00000492858.6
ENST00000647578.1
CDS CCA 72 bp AGGTCTGGGTGGTGGTGGCGGTGGCGGACAAGGTCCTaGTGCTGCAGCTTTCACAGTGAGGTTAAGGCTGAA +
Preference number: 6 (lower is better)
Translates to: RSGWWWRWRTRS*CCSFHSEVKAE
Trigger: TTCAGCCTTAACCTCACTGTGAAAGCTGCAGCACCAGGACCTTGTCCGCCACCGCCACCACCACCCAGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS CCA 72 bp TCCATGTTCCTAAAGAAGGGGTGGGTTTTGAAGGTCTaGGTGGTGGTGGCGGTGGCGGACAAGGTCCTGGTG +
Preference number: 6 (lower is better)
Translates to: SMFLKKGWVLKV*VVVAVADKVLV
Trigger: CACCAGGACCTTGTCCGCCACCGCCACCACCACCCAGACCTTCAAAACCCACCCCTTCTTTAGGAACATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647578.1
CDS GCA 72 bp GGCCCCTACTTCCTCCAAGTTCCTCTTGGGGAGGACTaGGTGGATGGACTCTGTGTTCATACCTGGGTCAGA +
Preference number: 6 (lower is better)
Translates to: GPYFLQVPLGED*VDGLCVHTWVR
Trigger: TCTGACCCAGGTATGAACACAGAGTCCATCCACGCAGTCCTCCCCAAGAGGAACTTGGAGGAAGTAGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492858.6
CDS CAA 72 bp CCAGCTTCATCCATGTTCCTAAAGAAGGGGTGGGTTTaGAAGGTCTGGGTGGTGGTGGCGGTGGCGGACAAG +
Preference number: 6 (lower is better)
Translates to: PASSMFLKKGWV*KVWVVVAVADK
Trigger: CTTGTCCGCCACCGCCACCACCACCCAGACCTTCAAAACCCACCCCTTCTTTAGGAACATGGATGAAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647578.1
CDS GCA 72 bp TCCCATCAGGGAAGACGTTATGATGGCTTTGGCCGGTaGCATTTTCCCCGTCACTGTCCTCTGACCATGCTG +
Preference number: 6 (lower is better)
Translates to: SHQGRRYDGFGR*HFPRHCPLTML
Trigger: CAGCATGGTCAGAGGACAGTGACGGGGAAAATGGCACCGGCCAAAGCCATCATAACGTCTTCCCTGATGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000409458.3
ENST00000465673.5
ENST00000492858.6
ENST00000647578.1
CDS GCA 72 bp CGCGGGGTCTCGTTTGGCGGCATCAAGTGGCAATCTTaGAGCCAGGAGCAGAAATCCCAGGAAATAGTAGAG +
Preference number: 6 (lower is better)
Translates to: RGVSFGGIKWQS*SQEQKSQEIVE
Trigger: CTCTACTATTTCCTGGGATTTCTGCTCCTGGCTGCAAGATTGCCACTTGATGCCGCCAAACGAGACCCCGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459927.5
CDS CCA 72 bp TGCCCAGCACATCATGAAATCCTGGGTCAGATGGGATaGTCAGAGCAGGACAGGCAAAGAGTGGGGAGACAG +
Preference number: 6 (lower is better)
Translates to: CPAHHEILGQMG*SEQDRQRVGRQ
Trigger: CTGTCTCCCCACTCTTTGCCTGTCCTGCTCTGACCATCCCATCTGACCCAGGATTTCATGATGTGCTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465673.5
CDS CCA 72 bp GGATGGACTCTGTGTTCATACCTGGGTCAGATGGGATaGTCAGAGCAGGACAGGCAAAGAGTGGGGAGACAG +
Preference number: 6 (lower is better)
Translates to: GWTLCSYLGQMG*SEQDRQRVGRQ
Trigger: CTGTCTCCCCACTCTTTGCCTGTCCTGCTCTGACCATCCCATCTGACCCAGGTATGAACACAGAGTCCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492858.6
CDS CCA 72 bp CTTCCTCCAAGTTCCTCTTGGGGAGGACTGCGTGGATaGACTCTGTGTTCATACCTGGGTCAGATGGGATGG +
Preference number: 6 (lower is better)
Translates to: LPPSSSWGGLRG*TLCSYLGQMGW
Trigger: CCATCCCATCTGACCCAGGTATGAACACAGAGTCCATCCACGCAGTCCTCCCCAAGAGGAACTTGGAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492858.6
CDS CCA 72 bp CCTACTTCCTCCAAGTTCCTCTTGGGGAGGACTGCGTaGATGGACTCTGTGTTCATACCTGGGTCAGATGGG +
Preference number: 6 (lower is better)
Translates to: PTSSKFLLGRTA*MDSVFIPGSDG
Trigger: CCCATCTGACCCAGGTATGAACACAGAGTCCATCCACGCAGTCCTCCCCAAGAGGAACTTGGAGGAAGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492858.6
CDS CAA 72 bp ATATGGCCAAGCAGCCAACGGAGATCAGGGCACTGTTaGCCATCCTTAAAGGCGAGGCTGGGTCTCTGTCAG +
Preference number: 6 (lower is better)
Translates to: IWPSSQRRSGHC*PSLKARLGLCQ
Trigger: CTGACAGAGACCCAGCCTCGCCTTTAAGGATGGCAAACAGTGCCCTGATCTCCGTTGGCTGCTTGGCCATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000470994.1
ENST00000647578.1
CDS CAA 90 bp GTGTCATCCCCCAGGGTGAGGTTCACACAGTACGTCCCAGACCCATaGAAGGTTCGTCTCACAGTCAGCAGACACATCTCATCCACATCC +
Preference number: 6 (lower is better)
Translates to: VSSPRVRFTQYVPDP*KVRLTVSRHISSTS
Trigger: GGATGTGGATGAGATGTGTCTGCTGACTGTGAGACGAACCTTCAATGGGTCTGGGACGTACTGTGTGAACCTCACCCTGGGGGATGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000479625.1
ENST00000647578.1
CDS CAA 90 bp CCCTTTTGGATGGAAGCTGGACATAGTTTAGTTGGTGGAGTTGCTTaGTTCTGTGGCCGGAGGCTGTCCAACCCTCCCCCAACCACTGTC +
Preference number: 6 (lower is better)
Translates to: PFWMEAGHSLVGGVA*FCGRRLSNPPPTTV
Trigger: GACAGTGGTTGGGGGAGGGTTGGACAGCCTCCGGCCACAGAACAAAGCAACTCCACCAACTAAACTATGTCCAGCTTCCATCCAAAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474157.1
CDS CCA 72 bp GGACGCAGGCACTCAAGGTTTAACTCTGAATTCCTCTaGGCCCGTCCACCAAGAGCAACAGTGTTCTTCTGG +
Preference number: 6 (lower is better)
Translates to: GRRHSRFNSEFL*ARPPRATVFFW
Trigger: CCAGAAGAACACTGTTGCTCTTGGTGGACGGGCCCAGAGGAATTCAGAGTTAAACCTTGAGTGCCTGCGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381990.6
ENST00000409458.3
ENST00000459927.5
ENST00000487890.5
ENST00000647578.1
CDS CCA 72 bp TTGAGAAATGCAGGGCTGGGATCCCATGCTAAGTTCTaGCTCCGCGTCTCCTGGGAACCTGTGTGTTCACAT +
Preference number: 6 (lower is better)
Translates to: LRNAGLGSHAKF*LRVSWEPVCSH
Trigger: ATGTGAACACACAGGTTCCCAGGAGACGCGGAGCCAGAACTTAGCATGGGATCCCAGCCCTGCATTTCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465673.5
ENST00000492858.6
CDS CAA 72 bp CCCAGGGTGAGGTTCACACAGTACGTCCCAGACCCATaGAAGGTTCGTCTCACAGTCAGCAGACACATCTCA +
Preference number: 6 (lower is better)
Translates to: PRVRFTQYVPDP*KVRLTVSRHIS
Trigger: TGAGATGTGTCTGCTGACTGTGAGACGAACCTTCAATGGGTCTGGGACGTACTGTGTGAACCTCACCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000470994.1
ENST00000479625.1
ENST00000647578.1
CDS CAA 72 bp ATATGGCCAAGCAGCCAACGGAGATCAGGGCACTGTTaGCCATCCTTAAAGGCGAGGCTGGGTCTTCTAGCT +
Preference number: 6 (lower is better)
Translates to: IWPSSQRRSGHC*PSLKARLGLLA
Trigger: AGCTAGAAGACCCAGCCTCGCCTTTAAGGATGGCAAACAGTGCCCTGATCTCCGTTGGCTGCTTGGCCATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463011.5
CDS CAA 72 bp ATGGAAGCTGGACATAGTTTAGTTGGTGGAGTTGCTTaGTTCTGTGGCCGGAGGCTGTCCAACCCTCCCCCA +
Preference number: 6 (lower is better)
Translates to: MEAGHSLVGGVA*FCGRRLSNPPP
Trigger: TGGGGGAGGGTTGGACAGCCTCCGGCCACAGAACAAAGCAACTCCACCAACTAAACTATGTCCAGCTTCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474157.1
CDS CAA 90 bp CAGCACATCATGAAATCCATGGCCCCTACTTCCTCCAAGTTCCTCTaGGGGAGGACTGCGTGGATGGACTCTGTGTTCATACCTGGGTCA +
Preference number: 6 (lower is better)
Translates to: QHIMKSMAPTSSKFL*GRTAWMDSVFIPGS
Trigger: TGACCCAGGTATGAACACAGAGTCCATCCACGCAGTCCTCCCCAAGAGGAACTTGGAGGAAGTAGGGGCCATGGATTTCATGATGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492858.6
CDS TCA 72 bp TACTCAGCTCCAGGGGGTTGTCACCAGCAGGTCCTGTaGATGAGAACATGCGGCGTTTGGTTTTCTGTCCTT +
Preference number: 6 (lower is better)
Translates to: YSAPGGCHQQVL*MRTCGVWFSVL
Trigger: AAGGACAGAAAACCAAACGCCGCATGTTCTCATTCACAGGACCTGCTGGTGACAACCCCCTGGAGCTGAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647578.1
CDS CAA 72 bp CAGTTTTCATCAGGAATCCTACTCAGCTCCAGGGGGTaGTCACCAGCAGGTCCTGTGAATGAGAACATGCGG +
Preference number: 6 (lower is better)
Translates to: QFSSGILLSSRG*SPAGPVNENMR
Trigger: CCGCATGTTCTCATTCACAGGACCTGCTGGTGACAACCCCCTGGAGCTGAGTAGGATTCCTGATGAAAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647578.1
CDS CAA 90 bp GGAGGCTGTCCAACCCTCCCCCAACCACTGTCTGGCAAGAATGGGTaGCAATTGCAATGGAAAAGAAGCTTCACAAGAGAAGGGCAGCAT +
Preference number: 6 (lower is better)
Translates to: GGCPTLPQPLSGKNG*QLQWKRSFTREGQH
Trigger: ATGCTGCCCTTCTCTTGTGAAGCTTCTTTTCCATTGCAATTGCAACCCATTCTTGCCAGACAGTGGTTGGGGGAGGGTTGGACAGCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474157.1
CDS GCA 72 bp CAGTCCAACCTGTTTGGCGGCATCAAGTGGCAATCTTaGAGCCAGGAGCAGAAATCCCAGGAAATAGTAGAG +
Preference number: 6 (lower is better)
Translates to: QSNLFGGIKWQS*SQEQKSQEIVE
Trigger: CTCTACTATTTCCTGGGATTTCTGCTCCTGGCTGCAAGATTGCCACTTGATGCCGCCAAACAGGTTGGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474157.1
CDS CAA 72 bp ATATGGCCAAGCAGCCAACGGAGATCAGGGCACTGTTaGCCATCCTTAAAGGCGAGGCTGGGTCTTAAAACA +
Preference number: 6 (lower is better)
Translates to: IWPSSQRRSGHC*PSLKARLGLKT
Trigger: TGTTTTAAGACCCAGCCTCGCCTTTAAGGATGGCAAACAGTGCCCTGATCTCCGTTGGCTGCTTGGCCATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468723.1
CDS CAA 72 bp ATATGGCCAAGCAGCCAACGGAGATCAGGGCACTGTTaGCCATCCTTAAAGGCGAGGCTGGGTATAGTCTTT +
Preference number: 6 (lower is better)
Translates to: IWPSSQRRSGHC*PSLKARLGIVF
Trigger: AAAGACTATACCCAGCCTCGCCTTTAAGGATGGCAAACAGTGCCCTGATCTCCGTTGGCTGCTTGGCCATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478451.1
CDS CAA 72 bp ATGAAATCCATGGCCCCTACTTCCTCCAAGTTCCTCTaGGGGAGGACTGCGTGGATGGACTCTGTGTTCATA +
Preference number: 6 (lower is better)
Translates to: MKSMAPTSSKFL*GRTAWMDSVFI
Trigger: TATGAACACAGAGTCCATCCACGCAGTCCTCCCCAAGAGGAACTTGGAGGAAGTAGGGGCCATGGATTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492858.6
CDS CAA 90 bp TTAATCTGGCAGTTTTCATCAGGAATCCTACTCAGCTCCAGGGGGTaGTCACCAGCAGGTCCTGTGAATGAGAACATGCGGCGTTTGGTT +
Preference number: 6 (lower is better)
Translates to: LIWQFSSGILLSSRG*SPAGPVNENMRRLV
Trigger: AACCAAACGCCGCATGTTCTCATTCACAGGACCTGCTGGTGACAACCCCCTGGAGCTGAGTAGGATTCCTGATGAAAACTGCCAGATTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647578.1
CDS GCA 72 bp ATCCTTTTCCTGGTTTCCCGGGAAGAACACGGCTTTTaGACGGTTGAGAAAGACACTCAGGCCTTTGCTTCT +
Preference number: 6 (lower is better)
Translates to: ILFLVSREEHGF*TVEKDTQAFAS
Trigger: AGAAGCAAAGGCCTGAGTGTCTTTCTCAACCGTGCAAAAGCCGTGTTCTTCCCGGGAAACCAGGAAAAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000463011.5
ENST00000468723.1
ENST00000478451.1
ENST00000647578.1
CDS GCA 72 bp CTTCCTCAGATGTTTGGCGGCATCAAGTGGCAATCTTaGAGCCAGGAGCAGAAATCCCAGGAAATAGTAGAG +
Preference number: 6 (lower is better)
Translates to: LPQMFGGIKWQS*SQEQKSQEIVE
Trigger: CTCTACTATTTCCTGGGATTTCTGCTCCTGGCTGCAAGATTGCCACTTGATGCCGCCAAACATCTGAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487890.5
CDS CCA 72 bp CTGTCCAACCCTCCCCCAACCACTGTCTGGCAAGAATaGGTTGCAATTGCAATGGAAAAGAAGCTTCACAAG +
Preference number: 6 (lower is better)
Translates to: LSNPPPTTVWQE*VAIAMEKKLHK
Trigger: CTTGTGAAGCTTCTTTTCCATTGCAATTGCAACCCATTCTTGCCAGACAGTGGTTGGGGGAGGGTTGGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474157.1
CDS CAA 72 bp CCGTCCATGTCTTCTGTAGACAGTCACTTCCATGAGTaGAGGCCCAAGTGTCACATTGGCTGTGTTCACAGA +
Preference number: 6 (lower is better)
Translates to: PSMSSVDSHFHE*RPKCHIGCVHR
Trigger: TCTGTGAACACAGCCAATGTGACACTTGGGCCTCAACTCATGGAAGTGACTGTCTACAGAAGACATGGACGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS CAA 72 bp CTCCCCCAACCACTGTCTGGCAAGAATGGGTTGCAATaGCAATGGAAAAGAAGCTTCACAAGAGAAGGGCAG +
Preference number: 6 (lower is better)
Translates to: LPQPLSGKNGLQ*QWKRSFTREGQ
Trigger: CTGCCCTTCTCTTGTGAAGCTTCTTTTCCATTGCAATTGCAACCCATTCTTGCCAGACAGTGGTTGGGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474157.1
CDS CAA 72 bp TTCAGGGCTGGGGAGATTCGTAAATTTGCCTCCAGATaGGAGACCCCATTTCATGTGAGGTCTCCACCCTTT +
Preference number: 6 (lower is better)
Translates to: FRAGEIRKFASR*ETPFHVRSPPF
Trigger: AAAGGGTGGAGACCTCACATGAAATGGGGTCTCCAATCTGGAGGCAAATTTACGAATCTCCCCAGCCCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474157.1
CDS GCA 72 bp GATTGTGCTCCCTCATGTAAGCAGAAGGTCTTTCATTaGCCAGCACATCATGAAATCCTGGGTCAGATGGGA +
Preference number: 6 (lower is better)
Translates to: DCAPSCKQKVFH*PAHHEILGQMG
Trigger: TCCCATCTGACCCAGGATTTCATGATGTGCTGGGCAATGAAAGACCTTCTGCTTACATGAGGGAGCACAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465673.5
CDS GCA 72 bp GATTGTGCTCCCTCATGTAAGCAGAAGGTCTTTCATTaGCCAGCACATCATGAAATCCATGGCCCCTACTTC +
Preference number: 6 (lower is better)
Translates to: DCAPSCKQKVFH*PAHHEIHGPYF
Trigger: GAAGTAGGGGCCATGGATTTCATGATGTGCTGGGCAATGAAAGACCTTCTGCTTACATGAGGGAGCACAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492858.6
CDS CCA 72 bp TCAGGCCATGGCACCGGCATCAGGACGTCTGTCATCTaGATGATGTTAACCTCTAAGATTCCCTCTACAATT +
Preference number: 6 (lower is better)
Translates to: SGHGTGIRTSVI*MMLTSKIPSTI
Trigger: AATTGTAGAGGGAATCTTAGAGGTTAACATCATCCAGATGACAGACGTCCTGATGCCGGTGCCATGGCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000479625.1
ENST00000647578.1
CDS CAA 90 bp AACATATGCCCGTCCATGTCTTCTGTAGACAGTCACTTCCATGAGTaGAGGCCCAAGTGTCACATTGGCTGTGTTCACAGAAACTCTCAC +
Preference number: 6 (lower is better)
Translates to: NICPSMSSVDSHFHE*RPKCHIGCVHRNSH
Trigger: GTGAGAGTTTCTGTGAACACAGCCAATGTGACACTTGGGCCTCAACTCATGGAAGTGACTGTCTACAGAAGACATGGACGGGCATATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS CAA 90 bp TGTCCAACCCTCCCCCAACCACTGTCTGGCAAGAATGGGTTGCAATaGCAATGGAAAAGAAGCTTCACAAGAGAAGGGCAGCATAGTTTT +
Preference number: 6 (lower is better)
Translates to: CPTLPQPLSGKNGLQ*QWKRSFTREGQHSF
Trigger: AAAACTATGCTGCCCTTCTCTTGTGAAGCTTCTTTTCCATTGCAATTGCAACCCATTCTTGCCAGACAGTGGTTGGGGGAGGGTTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474157.1
CDS TCA 72 bp TCTGGAAATACTGACCAAGTGTGTGGAAGACGTAGATaGAATTCCATCTTCTCCATCCGGGGTGGTGAGGAA +
Preference number: 6 (lower is better)
Translates to: SGNTDQVCGRRR*NSIFSIRGGEE
Trigger: TTCCTCACCACCCCGGATGGAGAAGATGGAATTTCATCTACGTCTTCCACACACTTGGTCAGTATTTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000465673.5
ENST00000647578.1
CDS TCA 72 bp CAAAAACTTACTTGTACACCAAGAGGGAGATCACAGTaGCAAATATGGCCAAGCAGCCAACGGAGATCAGGG +
Preference number: 6 (lower is better)
Translates to: QKLTCTPRGRSQ*QIWPSSQRRSG
Trigger: CCCTGATCTCCGTTGGCTGCTTGGCCATATTTGTCACTGTGATCTCCCTCTTGGTGTACAAGTAAGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470994.1
CDS TCA 72 bp GAAGAAGAGATGAGTGAGCCAGAGATGAAAGCTTCCTaGAGAACTTCAGTCCAACCTGTTTGGCGGCATCAA +
Preference number: 6 (lower is better)
Translates to: EEEMSEPEMKAS*RTSVQPVWRHQ
Trigger: TTGATGCCGCCAAACAGGTTGGACTGAAGTTCTTCAGGAAGCTTTCATCTCTGGCTCACTCATCTCTTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474157.1
CDS TCA 72 bp GTAAATTTGCCTCCAGATTGGAGACCCCATTTCATGTaGGGTCTCCACCCTTTTGGATGGAAGCTGGACATA +
Preference number: 6 (lower is better)
Translates to: VNLPPDWRPHFM*GLHPFGWKLDI
Trigger: TATGTCCAGCTTCCATCCAAAAGGGTGGAGACCTCACATGAAATGGGGTCTCCAATCTGGAGGCAAATTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474157.1
CDS GCA 72 bp ATCATGAAATCGTTTGGCGGCATCAAGTGGCAATCTTaGAGCCAGGAGCAGAAATCCCAGGAAATAGTAGAG +
Preference number: 6 (lower is better)
Translates to: IMKSFGGIKWQS*SQEQKSQEIVE
Trigger: CTCTACTATTTCCTGGGATTTCTGCTCCTGGCTGCAAGATTGCCACTTGATGCCGCCAAACGATTTCATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000409458.3
ENST00000647578.1
CDS GCA 72 bp GATTGTGCTCCCTCATGTAAGCAGAAGGTCTTTCATTaGCCAGCACATCATGAAATCGTTTGGCGGCATCAA +
Preference number: 6 (lower is better)
Translates to: DCAPSCKQKVFH*PAHHEIVWRHQ
Trigger: TTGATGCCGCCAAACGATTTCATGATGTGCTGGGCAATGAAAGACCTTCTGCTTACATGAGGGAGCACAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000409458.3
ENST00000647578.1
CDS GCA 72 bp CACGTACACATCTTTCACTTGTGCGATGGGAACATATaGCCGTCCATGTCTTCTGTAGACAGTCACTTCCAT +
Preference number: 6 (lower is better)
Translates to: HVHIFHLCDGNI*PSMSSVDSHFH
Trigger: ATGGAAGTGACTGTCTACAGAAGACATGGACGGGCATATGTTCCCATCGCACAAGTGAAAGATGTGTACGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS CCA 72 bp GATCTGTTACCACGTACACATCTTTCACTTGTGCGATaGGAACATATGCCCGTCCATGTCTTCTGTAGACAG +
Preference number: 6 (lower is better)
Translates to: DLLPRTHLSLVR*EHMPVHVFCRQ
Trigger: CTGTCTACAGAAGACATGGACGGGCATATGTTCCCATCGCACAAGTGAAAGATGTGTACGTGGTAACAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS CCA 72 bp TTGGAGACCCCATTTCATGTGAGGTCTCCACCCTTTTaGATGGAAGCTGGACATAGTTTAGTTGGTGGAGTT +
Preference number: 6 (lower is better)
Translates to: LETPFHVRSPPF*MEAGHSLVGGV
Trigger: AACTCCACCAACTAAACTATGTCCAGCTTCCATCCAAAAGGGTGGAGACCTCACATGAAATGGGGTCTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474157.1
CDS CAA 90 bp CACAAACACAGGAATCTGATCTGTTACCACGTACACATCTTTCACTaGTGCGATGGGAACATATGCCCGTCCATGTCTTCTGTAGACAGT +
Preference number: 6 (lower is better)
Translates to: HKHRNLICYHVHIFH*CDGNICPSMSSVDS
Trigger: ACTGTCTACAGAAGACATGGACGGGCATATGTTCCCATCGCACAAGTGAAAGATGTGTACGTGGTAACAGATCAGATTCCTGTGTTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS TCA 72 bp TTTGTAAAAGCCAACCAAGTGTGTGGAAGACGTAGATaGAATTCCATCTTCTCCATCCGGGGTGGTGAGGAA +
Preference number: 6 (lower is better)
Translates to: FVKANQVCGRRR*NSIFSIRGGEE
Trigger: TTCCTCACCACCCCGGATGGAGAAGATGGAATTTCATCTACGTCTTCCACACACTTGGTTGGCTTTTACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409458.3
CDS CAA 72 bp AGGAATCTGATCTGTTACCACGTACACATCTTTCACTaGTGCGATGGGAACATATGCCCGTCCATGTCTTCT +
Preference number: 6 (lower is better)
Translates to: RNLICYHVHIFH*CDGNICPSMSS
Trigger: AGAAGACATGGACGGGCATATGTTCCCATCGCACAAGTGAAAGATGTGTACGTGGTAACAGATCAGATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS TCA 72 bp CTAGAGGACATGCCGCTTATAATGCCATTAAATAAATaGGGAAGGGAGCCGTCACAGAAGATATATGGCTCC +
Preference number: 6 (lower is better)
Translates to: LEDMPLIMPLNK*GREPSQKIYGS
Trigger: GGAGCCATATATCTTCTGTGACGGCTCCCTTCCTCATTTATTTAATGGCATTATAAGCGGCATGTCCTCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468723.1
CDS GCA 72 bp AATCTGATCTGTTACCACGTACACATCTTTCACTTGTaGGATGGGAACATATGCCCGTCCATGTCTTCTGTA +
Preference number: 6 (lower is better)
Translates to: NLICYHVHIFHL*DGNICPSMSSV
Trigger: TACAGAAGACATGGACGGGCATATGTTCCCATCGCACAAGTGAAAGATGTGTACGTGGTAACAGATCAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS GCA 72 bp GATTGTGCTCCCTCATGTAAGCAGAAGGTCTTTCATTaGCCAGCACATCATGAAATCCTAGGGTCATCTTTA +
Preference number: 6 (lower is better)
Translates to: DCAPSCKQKVFH*PAHHEILGSSL
Trigger: TAAAGATGACCCTAGGATTTCATGATGTGCTGGGCAATGAAAGACCTTCTGCTTACATGAGGGAGCACAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459927.5
ENST00000487890.5
ENST00000492512.1
CDS TCA 72 bp AAGTGTCACATTGGCTGTGTTCACAGAAACTCTCACTaGACATCGTCCCAATTTCTGGAAATACTGACCAAG +
Preference number: 6 (lower is better)
Translates to: KCHIGCVHRNSH*TSSQFLEILTK
Trigger: CTTGGTCAGTATTTCCAGAAATTGGGACGATGTTCAGTGAGAGTTTCTGTGAACACAGCCAATGTGACACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000465673.5
ENST00000647578.1
CDS TCA 72 bp CATAATGGGGAGATCTTTGAGGAAGGTTTCGTCGGATaGATTTCGATCGTTCTTCTGGAACATAGTCACAAA +
Preference number: 6 (lower is better)
Translates to: HNGEIFEEGFVG*ISIVLLEHSHK
Trigger: TTTGTGACTATGTTCCAGAAGAACGATCGAAATTCATCCGACGAAACCTTCCTCAAAGATCTCCCCATTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000647578.1
CDS TCA 72 bp ACCTCTAAGATTCCCTCTACAATTGTGATGGTGGCTTaGAAGTGGCCATATCTGTTAATCTGGCAGTTTTCA +
Preference number: 6 (lower is better)
Translates to: TSKIPSTIVMVA*KWPYLLIWQFS
Trigger: TGAAAACTGCCAGATTAACAGATATGGCCACTTTCAAGCCACCATCACAATTGTAGAGGGAATCTTAGAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258733.9
ENST00000381990.6
ENST00000479625.1
ENST00000647578.1
CDS CAA 72 bp AGGGTCATCTTTAGTAGAAATCAAGATTCACATCTTTaGATTCCCAGGACAAGGACAAGTTCTTTCCACTGT +
Preference number: 6 (lower is better)
Translates to: RVIFSRNQDSHL*IPRTRTSSFHC
Trigger: ACAGTGGAAAGAACTTGTCCTTGTCCTGGGAATCAAAAGATGTGAATCTTGATTTCTACTAAAGATGACCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459927.5
ENST00000487890.5
ENST00000492512.1