Pregenerated sensors for GPN3 (Homo sapiens)
Ensembl gene IDs: ENSG00000111231Ensembl transcript IDs: ENST00000228827.8, ENST00000537466.6, ENST00000543199.5, ENST00000546592.1, ENST00000547323.1, ENST00000549963.1, ENST00000550228.5, ENST00000550974.1, ENST00000552180.5
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGTCCGACTGGACGGAGCGTAGCTCTTCTGCAGAGCCGCCCGCTGTaGCCGGGACCGAGGGTGGCGGCGGCGGGTGAGGTTGGGGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: GPTGRSVALLQSRPL*PGPRVAAAGEVGGP Trigger: GGGGCCCCCAACCTCACCCGCCGCCGCCACCCTCGGTCCCGGCCACAGCGGGCGGCTCTGCAGAAGAGCTACGCTCCGTCCAGTCGGACC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000546592.1 ENST00000552180.5 |
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| CDS GCA 90 bp | GACAGCTGCTCCCGCACACGGCTCGCGGTCTCGGCGCCGCGGAGATaGCCGGCCAGGGTCCGGGGTCCGACTGGACGGAGCGTAGCTCTT | + |
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Preference number: 5 (lower is better) Translates to: DSCSRTRLAVSAPRR*PARVRGPTGRSVAL Trigger: AAGAGCTACGCTCCGTCCAGTCGGACCCCGGACCCTGGCCGGGCATCTCCGCGGCGCCGAGACCGCGAGCCGTGTGCGGGAGCAGCTGTC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000546592.1 ENST00000552180.5 |
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| CDS TCA 90 bp | CCTTGTCCCCGCAGATCCTCACCTTCCCGCTGCCCGCGGGGCCCATaGCCAGCTGCGCATACCGAGGCATGTTGGCTCCCGGAGCCGCCC | + |
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Preference number: 5 (lower is better) Translates to: PCPRRSSPSRCPRGP*PAAHTEACWLPEPP Trigger: GGGCGGCTCCGGGAGCCAACATGCCTCGGTATGCGCAGCTGGTCATGGGCCCCGCGGGCAGCGGGAAGGTGAGGATCTGCGGGGACAAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000537466.6 |
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| CDS GCA 90 bp | CCGCAGATCCTCACCTTCCCGCTGCCCGCGGGGCCCATGACCAGCTaGGCATACCGAGGCATGTTGGCTCCCGGAGCCGCCCGCCACACT | + |
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Preference number: 5 (lower is better) Translates to: PQILTFPLPAGPMTS*AYRGMLAPGAARHT Trigger: AGTGTGGCGGGCGGCTCCGGGAGCCAACATGCCTCGGTATGCGCAGCTGGTCATGGGCCCCGCGGGCAGCGGGAAGGTGAGGATCTGCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537466.6 |
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| CDS GCA 90 bp | AGGATCTGGAATAGCGTGCTGTCGGGGGAGGGATGCTGGGACAGCTaGTCCCGCACACGGCTCGCGGTCTCGGCGCCGCGGAGATGCCCG | + |
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Preference number: 5 (lower is better) Translates to: RIWNSVLSGEGCWDS*SRTRLAVSAPRRCP Trigger: CGGGCATCTCCGCGGCGCCGAGACCGCGAGCCGTGTGCGGGAGCAGCTGTCCCAGCATCCCTCCCCCGACAGCACGCTATTCCAGATCCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000546592.1 ENST00000552180.5 |
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| CDS CCA 90 bp | AATGTGCTGAGGATCTGGAATAGCGTGCTGTCGGGGGAGGGATGCTaGGACAGCTGCTCCCGCACACGGCTCGCGGTCTCGGCGCCGCGG | + |
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Preference number: 5 (lower is better) Translates to: NVLRIWNSVLSGEGC*DSCSRTRLAVSAPR Trigger: CCGCGGCGCCGAGACCGCGAGCCGTGTGCGGGAGCAGCTGTCCCAGCATCCCTCCCCCGACAGCACGCTATTCCAGATCCTCAGCACATT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000546592.1 ENST00000552180.5 |
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| CDS TCA 90 bp | AGTGTTCTGCTGCTGGATCCAGGTTTACAACTTGGACAGACCGGTTaGGGGCTTCACAGTGCTGGACCATGGTGGCACAGTAGGTGCTCG | + |
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Preference number: 5 (lower is better) Translates to: SVLLLDPGLQLGQTG*GLHSAGPWWHSRCS Trigger: CGAGCACCTACTGTGCCACCATGGTCCAGCACTGTGAAGCCCTCAACCGGTCTGTCCAAGTTGTAAACCTGGATCCAGCAGCAGAACACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550974.1 |
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| CDS GCA 90 bp | AAAGCTCCGCATCCTTGCGCCACGTGCTTCGGTCCGTGGTTTGCGTaGAGACGTTTGACCTGTATGGTGACCCTCGCGATTTGCAAATGT | + |
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Preference number: 5 (lower is better) Translates to: KAPHPCATCFGPWFA*RRLTCMVTLAICKC Trigger: ACATTTGCAAATCGCGAGGGTCACCATACAGGTCAAACGTCTGCACGCAAACCACGGACCGAAGCACGTGGCGCAAGGATGCGGAGCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000543199.5 ENST00000546592.1 ENST00000549963.1 ENST00000552180.5 |
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| CDS GCA 90 bp | CCCTTAGCCTTCGCGCGACGCCCACTGAGCTCCGGGAAAGTGAAGTaGGAACCAATCGCAATCCACATTCTTTCTACGCCTCCAGTTCTA | + |
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Preference number: 5 (lower is better) Translates to: PLAFARRPLSSGKVK*EPIAIHILSTPPVL Trigger: TAGAACTGGAGGCGTAGAAAGAATGTGGATTGCGATTGGTTCGCACTTCACTTTCCCGGAGCTCAGTGGGCGTCGCGCGAAGGCTAAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549963.1 |
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| CDS CCA 90 bp | ACAACAGATAAAGCTCCGCATCCTTGCGCCACGTGCTTCGGTCCGTaGTTTGCGTGCAGACGTTTGACCTGTATGGTGACCCTCGCGATT | + |
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Preference number: 5 (lower is better) Translates to: TTDKAPHPCATCFGP*FACRRLTCMVTLAI Trigger: AATCGCGAGGGTCACCATACAGGTCAAACGTCTGCACGCAAACCACGGACCGAAGCACGTGGCGCAAGGATGCGGAGCTTTATCTGTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000543199.5 ENST00000546592.1 ENST00000549963.1 ENST00000552180.5 |
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| CDS TCA 90 bp | AGTGTTCTGCTGCTGGATCCAGGTTTACAACTTGGACAGACCGGTTaGGGGCTTCACAGTGCTGGACCATGGTGGCACAGTAGGTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: SVLLLDPGLQLGQTG*GLHSAGPWWHSRCS Trigger: AGAGCACCTACTGTGCCACCATGGTCCAGCACTGTGAAGCCCTCAACCGGTCTGTCCAAGTTGTAAACCTGGATCCAGCAGCAGAACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000228827.8 ENST00000543199.5 ENST00000547323.1 ENST00000552180.5 |
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| CDS TCA 90 bp | AGTGTTCTGCTGCTGGATCCAGGTTTACAACTTGGACAGACCGGTTaGGGGCTTCACAGTGCTGGACCATGGTGGCACAGTAGGTGCTTT | + |
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Preference number: 5 (lower is better) Translates to: SVLLLDPGLQLGQTG*GLHSAGPWWHSRCF Trigger: AAAGCACCTACTGTGCCACCATGGTCCAGCACTGTGAAGCCCTCAACCGGTCTGTCCAAGTTGTAAACCTGGATCCAGCAGCAGAACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537466.6 |
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| CDS GCA 90 bp | CAGTTCCCGGATGTCAGCCATCACGGAGTAGTTGAAGTGTTCTGCTaGTGGATCCAGGTTTACAACTTGGACAGACCGGTTGAGGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: QFPDVSHHGVVEVFC*WIQVYNLDRPVEGF Trigger: GAAGCCCTCAACCGGTCTGTCCAAGTTGTAAACCTGGATCCAGCAGCAGAACACTTCAACTACTCCGTGATGGCTGACATCCGGGAACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000228827.8 ENST00000537466.6 ENST00000543199.5 ENST00000550974.1 ENST00000552180.5 |
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| CDS GCA 90 bp | GATCAGTTCCCGGATGTCAGCCATCACGGAGTAGTTGAAGTGTTCTaGTGCTGGATCCAGGTTTACAACTTGGACAGACCGGTTGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: DQFPDVSHHGVVEVF*CWIQVYNLDRPVEG Trigger: GCCCTCAACCGGTCTGTCCAAGTTGTAAACCTGGATCCAGCAGCAGAACACTTCAACTACTCCGTGATGGCTGACATCCGGGAACTGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000228827.8 ENST00000537466.6 ENST00000543199.5 ENST00000550974.1 ENST00000552180.5 |
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| CDS TCA 90 bp | TGGAAGGCACCTCTTGTTTTGGGGAGCATGTATATTTCCCTCCTGTaGCGCACTGCTTCCACAGAGAGGTGCAAACGTGCAAACGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: WKAPLVLGSMYISLL*RTASTERCKRANAQ Trigger: CTGAGCGTTTGCACGTTTGCACCTCTCTGTGGAAGCAGTGCGTCACAGGAGGGAAATATACATGCTCCCCAAAACAAGAGGTGCCTTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000543199.5 ENST00000549963.1 |
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| CDS GCA 90 bp | TGCTCAGGACTTACCAGCCATCACGGAGTAGTTGAAGTGTTCTGCTaGTGGATCCAGGTTTACAACTTGGACAGACCGGTTGAGGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: CSGLTSHHGVVEVFC*WIQVYNLDRPVEGF Trigger: GAAGCCCTCAACCGGTCTGTCCAAGTTGTAAACCTGGATCCAGCAGCAGAACACTTCAACTACTCCGTGATGGCTGGTAAGTCCTGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547323.1 |
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| CDS GCA 90 bp | CTTTGCTCAGGACTTACCAGCCATCACGGAGTAGTTGAAGTGTTCTaGTGCTGGATCCAGGTTTACAACTTGGACAGACCGGTTGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: LCSGLTSHHGVVEVF*CWIQVYNLDRPVEG Trigger: GCCCTCAACCGGTCTGTCCAAGTTGTAAACCTGGATCCAGCAGCAGAACACTTCAACTACTCCGTGATGGCTGGTAAGTCCTGAGCAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547323.1 |
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| CDS CCA 90 bp | TTCCCGGATGTCAGCCATCACGGAGTAGTTGAAGTGTTCTGCTGCTaGATCCAGGTTTACAACTTGGACAGACCGGTTGAGGGCTTCACA | + |
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Preference number: 5 (lower is better) Translates to: FPDVSHHGVVEVFCC*IQVYNLDRPVEGFT Trigger: TGTGAAGCCCTCAACCGGTCTGTCCAAGTTGTAAACCTGGATCCAGCAGCAGAACACTTCAACTACTCCGTGATGGCTGACATCCGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000228827.8 ENST00000537466.6 ENST00000543199.5 ENST00000550974.1 ENST00000552180.5 |
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| CDS CCA 90 bp | TCAGGACTTACCAGCCATCACGGAGTAGTTGAAGTGTTCTGCTGCTaGATCCAGGTTTACAACTTGGACAGACCGGTTGAGGGCTTCACA | + |
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Preference number: 5 (lower is better) Translates to: SGLTSHHGVVEVFCC*IQVYNLDRPVEGFT Trigger: TGTGAAGCCCTCAACCGGTCTGTCCAAGTTGTAAACCTGGATCCAGCAGCAGAACACTTCAACTACTCCGTGATGGCTGGTAAGTCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547323.1 |
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| CDS TCA 90 bp | ATGGTGACCCTCGCGATTTGCAAATGTGCTGAGGATCTGGAATACTaGAGTGGAAGGCACCTCTTGTTTTGGGGAGCATGTATATTTCCC | + |
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Preference number: 5 (lower is better) Translates to: MVTLAICKCAEDLEY*SGRHLLFWGACIFP Trigger: GGGAAATATACATGCTCCCCAAAACAAGAGGTGCCTTCCACTTCAGTATTCCAGATCCTCAGCACATTTGCAAATCGCGAGGGTCACCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000543199.5 ENST00000549963.1 |
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| CDS CCA 90 bp | CGTCCTCTACATGGCCAAGACAGTTCTCCAGCCAGTCAAAATTATTaGCAAAGTACTCCATGCAAAATACCAATCCTCCGTTGGGACCGA | + |
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Preference number: 5 (lower is better) Translates to: RPLHGQDSSPASQNY*QSTPCKIPILRWDR Trigger: TCGGTCCCAACGGAGGATTGGTATTTTGCATGGAGTACTTTGCCAATAATTTTGACTGGCTGGAGAACTGTCTTGGCCATGTAGAGGACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000228827.8 ENST00000537466.6 ENST00000543199.5 ENST00000550228.5 ENST00000550974.1 |
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| CDS GCA 90 bp | CAAGACAGTTCTCCAGCCAGTCAAAATTATTGGCAAAGTACTCCATaGAAAATACCAATCCTCCGTTGGGACCGAATCGCAGAGAATCAT | + |
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Preference number: 5 (lower is better) Translates to: QDSSPASQNYWQSTP*KIPILRWDRIAENH Trigger: ATGATTCTCTGCGATTCGGTCCCAACGGAGGATTGGTATTTTGCATGGAGTACTTTGCCAATAATTTTGACTGGCTGGAGAACTGTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000228827.8 ENST00000537466.6 ENST00000543199.5 ENST00000550228.5 ENST00000550974.1 |
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| CDS CCA 90 bp | CAAAATTATTGGCAAAGTACTCCATGCAAAATACCAATCCTCCGTTaGGACCGAATCGCAGAGAATCATCCTCCATTACATCATCCACCT | + |
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Preference number: 5 (lower is better) Translates to: QNYWQSTPCKIPILR*DRIAENHPPLHHPP Trigger: AGGTGGATGATGTAATGGAGGATGATTCTCTGCGATTCGGTCCCAACGGAGGATTGGTATTTTGCATGGAGTACTTTGCCAATAATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000228827.8 ENST00000537466.6 ENST00000543199.5 ENST00000550228.5 ENST00000550974.1 |
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| CDS GCA 72 bp | TCCCGCACACGGCTCGCGGTCTCGGCGCCGCGGAGATaGCCGGCCAGGGTCCGGGGTCCGACTGGACGGAGC | + |
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Preference number: 6 (lower is better) Translates to: SRTRLAVSAPRR*PARVRGPTGRS Trigger: GCTCCGTCCAGTCGGACCCCGGACCCTGGCCGGGCATCTCCGCGGCGCCGAGACCGCGAGCCGTGTGCGGGA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000546592.1 ENST00000552180.5 |
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| CDS CCA 72 bp | GGACGGAGCGTAGCTCTTCTGCAGAGCCGCCCGCTGTaGCCGGGACCGAGGGTGGCGGCGGCGGGTGAGGTT | + |
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Preference number: 6 (lower is better) Translates to: GRSVALLQSRPL*PGPRVAAAGEV Trigger: AACCTCACCCGCCGCCGCCACCCTCGGTCCCGGCCACAGCGGGCGGCTCTGCAGAAGAGCTACGCTCCGTCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000546592.1 ENST00000552180.5 |
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| CDS GCA 72 bp | AATAGCGTGCTGTCGGGGGAGGGATGCTGGGACAGCTaGTCCCGCACACGGCTCGCGGTCTCGGCGCCGCGG | + |
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Preference number: 6 (lower is better) Translates to: NSVLSGEGCWDS*SRTRLAVSAPR Trigger: CCGCGGCGCCGAGACCGCGAGCCGTGTGCGGGAGCAGCTGTCCCAGCATCCCTCCCCCGACAGCACGCTATT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000546592.1 ENST00000552180.5 |
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| CDS TCA 72 bp | CGCAGATCCTCACCTTCCCGCTGCCCGCGGGGCCCATaGCCAGCTGCGCATACCGAGGCATGTTGGCTCCCG | + |
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Preference number: 6 (lower is better) Translates to: RRSSPSRCPRGP*PAAHTEACWLP Trigger: CGGGAGCCAACATGCCTCGGTATGCGCAGCTGGTCATGGGCCCCGCGGGCAGCGGGAAGGTGAGGATCTGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537466.6 |
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| CDS CCA 72 bp | AGGATCTGGAATAGCGTGCTGTCGGGGGAGGGATGCTaGGACAGCTGCTCCCGCACACGGCTCGCGGTCTCG | + |
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Preference number: 6 (lower is better) Translates to: RIWNSVLSGEGC*DSCSRTRLAVS Trigger: CGAGACCGCGAGCCGTGTGCGGGAGCAGCTGTCCCAGCATCCCTCCCCCGACAGCACGCTATTCCAGATCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000546592.1 ENST00000552180.5 |
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| CDS GCA 72 bp | CCTGTGACGCACTGCTTCCACAGAGAGGTGCAAACGTaGAAACGCTCAGCGACCGCAGCGCTCCTGCCCCTC | + |
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Preference number: 6 (lower is better) Translates to: PVTHCFHREVQT*KRSATAALLPL Trigger: GAGGGGCAGGAGCGCTGCGGTCGCTGAGCGTTTGCACGTTTGCACCTCTCTGTGGAAGCAGTGCGTCACAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543199.5 |
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| CDS GCA 72 bp | GCAGTTTTGTTGTGGACAGAGGGCAGAGGGGAGGACTaGCTCGCGGTTGAGGGAGGGTCTCTGAGGGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: AVLLWTEGRGED*LAVEGGSLREA Trigger: AGCTTCCCTCAGAGACCCTCCCTCAACCGCGAGGCAGTCCTCCCCTCTGCCCTCTGTCCACAACAAAACTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000546592.1 |
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| CDS GCA 72 bp | CGGACAACAGATAAAGCTCCGCATCCTTGCGCCACGTaGTTCGGTCCGTGGTTTGCGTGCAGACGTTTGACC | + |
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Preference number: 6 (lower is better) Translates to: RTTDKAPHPCAT*FGPWFACRRLT Trigger: GGTCAAACGTCTGCACGCAAACCACGGACCGAAGCACGTGGCGCAAGGATGCGGAGCTTTATCTGTTGTCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000543199.5 ENST00000546592.1 ENST00000549963.1 ENST00000552180.5 |
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| CDS CCA 72 bp | AAAGCTCCGCATCCTTGCGCCACGTGCTTCGGTCCGTaGTTTGCGTGCAGACGTTTGACCTGTATGGTGACC | + |
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Preference number: 6 (lower is better) Translates to: KAPHPCATCFGP*FACRRLTCMVT Trigger: GGTCACCATACAGGTCAAACGTCTGCACGCAAACCACGGACCGAAGCACGTGGCGCAAGGATGCGGAGCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000543199.5 ENST00000546592.1 ENST00000549963.1 ENST00000552180.5 |
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| CDS CAA 72 bp | GCTGCTGGATCCAGGTTTACAACTTGGACAGACCGGTaGAGGGCTTCACAGTGCTGGACCATGGTGGCACAG | + |
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Preference number: 6 (lower is better) Translates to: AAGSRFTTWTDR*RASQCWTMVAQ Trigger: CTGTGCCACCATGGTCCAGCACTGTGAAGCCCTCAACCGGTCTGTCCAAGTTGTAAACCTGGATCCAGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000228827.8 ENST00000537466.6 ENST00000543199.5 ENST00000547323.1 ENST00000550974.1 ENST00000552180.5 |
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| CDS CAA 90 bp | CATCCTTGCGCCACGTGCTTCGGTCCGTGGTTTGCGTGCAGACGTTaGACCTGTATGGTGACCCTCGCGATTTGCAAATGTGCTGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: HPCATCFGPWFACRR*TCMVTLAICKCAED Trigger: ATCCTCAGCACATTTGCAAATCGCGAGGGTCACCATACAGGTCAAACGTCTGCACGCAAACCACGGACCGAAGCACGTGGCGCAAGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000543199.5 ENST00000546592.1 ENST00000549963.1 ENST00000552180.5 |
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| CDS TCA 72 bp | GACCTGTATGGTGACCCTCGCGATTTGCAAATGTGCTaGGGATCTGGAATAGCGTGCTGTCGGGGGAGGGAT | + |
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Preference number: 6 (lower is better) Translates to: DLYGDPRDLQMC*GSGIACCRGRD Trigger: ATCCCTCCCCCGACAGCACGCTATTCCAGATCCTCAGCACATTTGCAAATCGCGAGGGTCACCATACAGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000546592.1 ENST00000552180.5 |
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| CDS GCA 72 bp | TTCGCGCGACGCCCACTGAGCTCCGGGAAAGTGAAGTaGGAACCAATCGCAATCCACATTCTTTCTACGCCT | + |
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Preference number: 6 (lower is better) Translates to: FARRPLSSGKVK*EPIAIHILSTP Trigger: AGGCGTAGAAAGAATGTGGATTGCGATTGGTTCGCACTTCACTTTCCCGGAGCTCAGTGGGCGTCGCGCGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549963.1 |
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| CDS CAA 72 bp | GCCACGTGCTTCGGTCCGTGGTTTGCGTGCAGACGTTaGACCTGTATGGTGACCCTCGCGATTTGCAAATGT | + |
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Preference number: 6 (lower is better) Translates to: ATCFGPWFACRR*TCMVTLAICKC Trigger: ACATTTGCAAATCGCGAGGGTCACCATACAGGTCAAACGTCTGCACGCAAACCACGGACCGAAGCACGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000543199.5 ENST00000546592.1 ENST00000549963.1 ENST00000552180.5 |
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| CDS GCA 72 bp | CCGGATGTCAGCCATCACGGAGTAGTTGAAGTGTTCTaGTGCTGGATCCAGGTTTACAACTTGGACAGACCG | + |
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Preference number: 6 (lower is better) Translates to: PDVSHHGVVEVF*CWIQVYNLDRP Trigger: CGGTCTGTCCAAGTTGTAAACCTGGATCCAGCAGCAGAACACTTCAACTACTCCGTGATGGCTGACATCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000228827.8 ENST00000537466.6 ENST00000543199.5 ENST00000550974.1 ENST00000552180.5 |
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| CDS CCA 72 bp | TTGAAGTGTTCTGCTGCTGGATCCAGGTTTACAACTTaGACAGACCGGTTGAGGGCTTCACAGTGCTGGACC | + |
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Preference number: 6 (lower is better) Translates to: LKCSAAGSRFTT*TDRLRASQCWT Trigger: GGTCCAGCACTGTGAAGCCCTCAACCGGTCTGTCCAAGTTGTAAACCTGGATCCAGCAGCAGAACACTTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000228827.8 ENST00000537466.6 ENST00000543199.5 ENST00000547323.1 ENST00000550974.1 ENST00000552180.5 |
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| CDS GCA 72 bp | GGACTTACCAGCCATCACGGAGTAGTTGAAGTGTTCTaGTGCTGGATCCAGGTTTACAACTTGGACAGACCG | + |
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Preference number: 6 (lower is better) Translates to: GLTSHHGVVEVF*CWIQVYNLDRP Trigger: CGGTCTGTCCAAGTTGTAAACCTGGATCCAGCAGCAGAACACTTCAACTACTCCGTGATGGCTGGTAAGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547323.1 |
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| CDS CCA 72 bp | GTCAGCCATCACGGAGTAGTTGAAGTGTTCTGCTGCTaGATCCAGGTTTACAACTTGGACAGACCGGTTGAG | + |
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Preference number: 6 (lower is better) Translates to: VSHHGVVEVFCC*IQVYNLDRPVE Trigger: CTCAACCGGTCTGTCCAAGTTGTAAACCTGGATCCAGCAGCAGAACACTTCAACTACTCCGTGATGGCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000228827.8 ENST00000537466.6 ENST00000543199.5 ENST00000550974.1 ENST00000552180.5 |
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| CDS CCA 72 bp | ACCAGCCATCACGGAGTAGTTGAAGTGTTCTGCTGCTaGATCCAGGTTTACAACTTGGACAGACCGGTTGAG | + |
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Preference number: 6 (lower is better) Translates to: TSHHGVVEVFCC*IQVYNLDRPVE Trigger: CTCAACCGGTCTGTCCAAGTTGTAAACCTGGATCCAGCAGCAGAACACTTCAACTACTCCGTGATGGCTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547323.1 |
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| CDS TCA 72 bp | GACCTGTATGGTGACCCTCGCGATTTGCAAATGTGCTaGGGATCTGGAATACTGAAGTGGAAGGCACCTCTT | + |
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Preference number: 6 (lower is better) Translates to: DLYGDPRDLQMC*GSGILKWKAPL Trigger: AAGAGGTGCCTTCCACTTCAGTATTCCAGATCCTCAGCACATTTGCAAATCGCGAGGGTCACCATACAGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000543199.5 ENST00000549963.1 |
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| CDS GCA 72 bp | GATGTCAGCCATCACGGAGTAGTTGAAGTGTTCTGCTaGTGGATCCAGGTTTACAACTTGGACAGACCGGTT | + |
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Preference number: 6 (lower is better) Translates to: DVSHHGVVEVFC*WIQVYNLDRPV Trigger: AACCGGTCTGTCCAAGTTGTAAACCTGGATCCAGCAGCAGAACACTTCAACTACTCCGTGATGGCTGACATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000228827.8 ENST00000537466.6 ENST00000543199.5 ENST00000550974.1 ENST00000552180.5 |
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| CDS GCA 72 bp | CTTACCAGCCATCACGGAGTAGTTGAAGTGTTCTGCTaGTGGATCCAGGTTTACAACTTGGACAGACCGGTT | + |
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Preference number: 6 (lower is better) Translates to: LTSHHGVVEVFC*WIQVYNLDRPV Trigger: AACCGGTCTGTCCAAGTTGTAAACCTGGATCCAGCAGCAGAACACTTCAACTACTCCGTGATGGCTGGTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547323.1 |
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| CDS CAA 90 bp | TCGTCCTCTACATGGCCAAGACAGTTCTCCAGCCAGTCAAAATTATaGGCAAAGTACTCCATGCAAAATACCAATCCTCCGTTGGGACCG | + |
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Preference number: 6 (lower is better) Translates to: SSSTWPRQFSSQSKL*AKYSMQNTNPPLGP Trigger: CGGTCCCAACGGAGGATTGGTATTTTGCATGGAGTACTTTGCCAATAATTTTGACTGGCTGGAGAACTGTCTTGGCCATGTAGAGGACGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000228827.8 ENST00000537466.6 ENST00000543199.5 ENST00000550228.5 ENST00000550974.1 |
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| CDS GCA 72 bp | TCTCCAGCCAGTCAAAATTATTGGCAAAGTACTCCATaGAAAATACCAATCCTCCGTTGGGACCGAATCGCA | + |
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Preference number: 6 (lower is better) Translates to: SPASQNYWQSTP*KIPILRWDRIA Trigger: TGCGATTCGGTCCCAACGGAGGATTGGTATTTTGCATGGAGTACTTTGCCAATAATTTTGACTGGCTGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000228827.8 ENST00000537466.6 ENST00000543199.5 ENST00000550228.5 ENST00000550974.1 |
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| CDS CCA 72 bp | TGGCAAAGTACTCCATGCAAAATACCAATCCTCCGTTaGGACCGAATCGCAGAGAATCATCCTCCATTACAT | + |
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Preference number: 6 (lower is better) Translates to: WQSTPCKIPILR*DRIAENHPPLH Trigger: ATGTAATGGAGGATGATTCTCTGCGATTCGGTCCCAACGGAGGATTGGTATTTTGCATGGAGTACTTTGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000228827.8 ENST00000537466.6 ENST00000543199.5 ENST00000550228.5 ENST00000550974.1 |
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| CDS CAA 72 bp | TTGGCAAAGTACTCCATGCAAAATACCAATCCTCCGTaGGGACCGAATCGCAGAGAATCATCCTCCATTACA | + |
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Preference number: 6 (lower is better) Translates to: LAKYSMQNTNPP*GPNRRESSSIT Trigger: TGTAATGGAGGATGATTCTCTGCGATTCGGTCCCAACGGAGGATTGGTATTTTGCATGGAGTACTTTGCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000228827.8 ENST00000537466.6 ENST00000543199.5 ENST00000550228.5 ENST00000550974.1 |
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| CDS CCA 72 bp | CATGGCCAAGACAGTTCTCCAGCCAGTCAAAATTATTaGCAAAGTACTCCATGCAAAATACCAATCCTCCGT | + |
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Preference number: 6 (lower is better) Translates to: HGQDSSPASQNY*QSTPCKIPILR Trigger: ACGGAGGATTGGTATTTTGCATGGAGTACTTTGCCAATAATTTTGACTGGCTGGAGAACTGTCTTGGCCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000228827.8 ENST00000537466.6 ENST00000543199.5 ENST00000550228.5 ENST00000550974.1 |
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| CDS CAA 90 bp | TCAAAATTATTGGCAAAGTACTCCATGCAAAATACCAATCCTCCGTaGGGACCGAATCGCAGAGAATCATCCTCCATTACATCATCCACC | + |
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Preference number: 6 (lower is better) Translates to: SKLLAKYSMQNTNPP*GPNRRESSSITSST Trigger: GGTGGATGATGTAATGGAGGATGATTCTCTGCGATTCGGTCCCAACGGAGGATTGGTATTTTGCATGGAGTACTTTGCCAATAATTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000228827.8 ENST00000537466.6 ENST00000543199.5 ENST00000550228.5 ENST00000550974.1 |
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| CDS TCA 72 bp | AAAGGATACTGTCACACATATCACCATGAACAGATGTaGCCAAATGACAAGCTCATGCTATTTACCATAACA | + |
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Preference number: 6 (lower is better) Translates to: KGYCHTYHHEQM*PNDKLMLFTIT Trigger: TGTTATGGTAAATAGCATGAGCTTGTCATTTGGTCACATCTGTTCATGGTGATATGTGTGACAGTATCCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547323.1 |
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