RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPLD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000112293

Ensembl transcript IDs: ENST00000230036.2, ENST00000378243.8, ENST00000474784.5, ENST00000475417.1, ENST00000486892.5, ENST00000492917.2

Found 306 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGAGCCCCATGTCTATCAGGATCTACCACCGCTCCACTGGATGTaGCACTTTGTCCATCAAAATGCTCACCATGGATGTGATTCAGCA +
Preference number: 1 (lower is better)
Translates to: QEPHVYQDLPPLHWM*HFVHQNAHHGCDSA
Trigger: TGCTGAATCACATCCATGGTGAGCATTTTGATGGACAAAGTGGCACATCCAGTGGAGCGGTGGTAGATCCTGATAGACATGGGGCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR CCA 90 bp TACTCCCAGGAGCCCCATGTCTATCAGGATCTACCACCGCTCCACTaGATGTGCCACTTTGTCCATCAAAATGCTCACCATGGATGTGAT +
Preference number: 1 (lower is better)
Translates to: YSQEPHVYQDLPPLH*MCHFVHQNAHHGCD
Trigger: ATCACATCCATGGTGAGCATTTTGATGGACAAAGTGGCACATCCAGTGGAGCGGTGGTAGATCCTGATAGACATGGGGCTCCTGGGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR TCA 90 bp CCACTGGATGTGCCACTTTGTCCATCAAAATGCTCACCATGGATGTaGTTCAGCATGAGAGAGGTGGGCAGAGTGGGGAAATGCAGTGAA +
Preference number: 1 (lower is better)
Translates to: PLDVPLCPSKCSPWM*FSMREVGRVGKCSE
Trigger: TTCACTGCATTTCCCCACTCTGCCCACCTCTCTCATGCTGAATCACATCCATGGTGAGCATTTTGATGGACAAAGTGGCACATCCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR TCA 90 bp ATACATTCCATTCCCTTAAGTGTGCCACGCTGCAGGACTGACAAATaGAATCCATCCTACGAAAAACAGCCCAGGAACAAGCGAGGCCAA +
Preference number: 1 (lower is better)
Translates to: IHSIPLSVPRCRTDK*NPSYEKQPRNKRGQ
Trigger: TTGGCCTCGCTTGTTCCTGGGCTGTTTTTCGTAGGATGGATTTCATTTGTCAGTCCTGCAGCGTGGCACACTTAAGGGAATGGAATGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR TCA 90 bp CCCTATGATACATTCCATTCCCTTAAGTGTGCCACGCTGCAGGACTaGCAAATGAAATCCATCCTACGAAAAACAGCCCAGGAACAAGCG +
Preference number: 1 (lower is better)
Translates to: PYDTFHSLKCATLQD*QMKSILRKTAQEQA
Trigger: CGCTTGTTCCTGGGCTGTTTTTCGTAGGATGGATTTCATTTGTCAGTCCTGCAGCGTGGCACACTTAAGGGAATGGAATGTATCATAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR CCA 90 bp TTCTGGTGCAGTCATATATTTACTGTATCAGATTTCCAGAGGGTGTaGCTGTTAGTGTGTCTCTCTACTCCCAGGAGCCCCATGTCTATC +
Preference number: 1 (lower is better)
Translates to: FWCSHIFTVSDFQRV*LLVCLSTPRSPMSI
Trigger: GATAGACATGGGGCTCCTGGGAGTAGAGAGACACACTAACAGCCACACCCTCTGGAAATCTGATACAGTAAATATATGACTGCACCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR CCA 90 bp CATGACTTTAGTAATACCTACAGAGGTGAGCTAATGGATGGTACATaGAGTAGGGACTGCAGAGACCCTAGTTTTGTCCCCACTCCATCT +
Preference number: 1 (lower is better)
Translates to: HDFSNTYRGELMDGT*SRDCRDPSFVPTPS
Trigger: AGATGGAGTGGGGACAAAACTAGGGTCTCTGCAGTCCCTACTCCATGTACCATCCATTAGCTCACCTCTGTAGGTATTACTAAAGTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR GCA 90 bp TACCTCTTCCAGAAAAATGAGGTCATCCTGGGAGTGACCCAGAGATaGTCTCTAGGGATGTACCTCTTGATGTTCTTGTTAACTTTCCAC +
Preference number: 1 (lower is better)
Translates to: YLFQKNEVILGVTQR*SLGMYLLMFLLTFH
Trigger: GTGGAAAGTTAACAAGAACATCAAGAGGTACATCCCTAGAGAGCATCTCTGGGTCACTCCCAGGATGACCTCATTTTTCTGGAAGAGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR TCA 90 bp CTCAAGTGTCAGATGTCAGAGTGCTCTAACTGCTCAACTCATAAGTaGATACAACTAAGTAATTTCTGGTCCCCTAAAAATAACCATCCT +
Preference number: 1 (lower is better)
Translates to: LKCQMSECSNCSTHK*IQLSNFWSPKNNHP
Trigger: AGGATGGTTATTTTTAGGGGACCAGAAATTACTTAGTTGTATTCACTTATGAGTTGAGCAGTTAGAGCACTCTGACATCTGACACTTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR-3UTR TCA 90 bp CCTGCTTTCCTCTCCGGCCCTTACAGTAGCGTGTGGCTCAGGCCACATCTTTTCGACAGGAGAATCACTTaGACCTGGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: PAFLSGPYSSVWLRPHLFDRRIT*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGTC...GAAAAGATGTGGCCTGAGCCACACGCTACTGTAAGGGCCGGAGAGGAAAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR-3UTR GCA 90 bp CCCTCCTCCCACCTTCCGCCCTCTCATAGGCCCCAGTGTGTGTTGTTTCCCTCTCCGCTCCACTGGATGTaGCACTTTGTCCATCAAAAT +
Preference number: 2 (lower is better)
Translates to: PSSHLPPSHRPQCVLFPSPLHWM*HFVHQN
Trigger: ATTTTGATGGACAAAGTGGCACATCCAGTGGAGCGG...AGAGGGAAACAACACACACTGGGGCCTATGAGAGGGCGGAAGGTGGGAGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR-3UTR TCA 90 bp CCTGCTTTCCTCTCCGGCCCTTACAGTAGCGTGTGGCTCAGGCCACATCTTTTCGACAAAGGTCCCTCATaGGATGGCTTAAAACTAGCA +
Preference number: 2 (lower is better)
Translates to: PAFLSGPYSSVWLRPHLFDKGPS*DGLKLA
Trigger: TGCTAGTTTTAAGCCATCTCATGAGGGACCTTTGTC...GAAAAGATGTGGCCTGAGCCACACGCTACTGTAAGGGCCGGAGAGGAAAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR-3UTR CCA 90 bp CCTGCTTTCCTCTCCGGCCCTTACAGTAGCGTGTGGCTCAGGCCACATCTTTTCACTCTACAAAAGTATTaGAGGGCACAGAAGGGTGAT +
Preference number: 2 (lower is better)
Translates to: PAFLSGPYSSVWLRPHLFTLQKY*RAQKGD
Trigger: ATCACCCTTCTGTGCCCTCCAATACTTTTGTAGAGT...GAAAAGATGTGGCCTGAGCCACACGCTACTGTAAGGGCCGGAGAGGAAAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR CAA 90 bp CCCATGTCTATCAGGATCTACCACCGCTCCACTGGATGTGCCACTTaGTCCATCAAAATGCTCACCATGGATGTGATTCAGCATGAGAGA +
Preference number: 2 (lower is better)
Translates to: PMSIRIYHRSTGCAT*SIKMLTMDVIQHER
Trigger: TCTCTCATGCTGAATCACATCCATGGTGAGCATTTTGATGGACAAAGTGGCACATCCAGTGGAGCGGTGGTAGATCCTGATAGACATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR CAA 90 bp GGAGTGACCCAGAGATGCTCTCTAGGGATGTACCTCTTGATGTTCTaGTTAACTTTCCACTCTTCAGCTGGATTCCTCTTCCTGTCCCCT +
Preference number: 2 (lower is better)
Translates to: GVTQRCSLGMYLLMF*LTFHSSAGFLFLSP
Trigger: AGGGGACAGGAAGAGGAATCCAGCTGAAGAGTGGAAAGTTAACAAGAACATCAAGAGGTACATCCCTAGAGAGCATCTCTGGGTCACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR-3UTR TCA 90 bp CTGCTTTTAGTATCATCTCACCCGTGGCAGAAGAAAGAGGTTCTTCCCAATTTAGGATGTGATTCAGCATaGGAGAGGTGGGCAGAGTGG +
Preference number: 2 (lower is better)
Translates to: LLLVSSHPWQKKEVLPNLGCDSA*ERWAEW
Trigger: CCACTCTGCCCACCTCTCTCATGCTGAATCACATCC...TAAATTGGGAAGAACCTCTTTCTTCTGCCACGGGTGAGATGATACTAAAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR-3UTR GCA 90 bp CCTGCTTTCCTCTCCGGCCCTTACAGTAGCGTGTGGCTCAGGCCACATCTTTTCAGTAAGCAGAATGTCTaGTATTTCACATATTTCTGG +
Preference number: 2 (lower is better)
Translates to: PAFLSGPYSSVWLRPHLFSKQNV*YFTYFW
Trigger: CCAGAAATATGTGAAATAGCAGACATTCTGCTTACT...GAAAAGATGTGGCCTGAGCCACACGCTACTGTAAGGGCCGGAGAGGAAAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR-3UTR CCA 90 bp CCTGCTTTCCTCTCCGGCCCTTACAGTAGCGTGTGGCTCAGGCCACATCTTTTCCTATTATACTTTGATTaGCATGGGCCAATCTGTTAT +
Preference number: 2 (lower is better)
Translates to: PAFLSGPYSSVWLRPHLFLLYFD*HGPICY
Trigger: ATAACAGATTGGCCCATGCCAATCAAAGTATAATAG...GAAAAGATGTGGCCTGAGCCACACGCTACTGTAAGGGCCGGAGAGGAAAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR-3UTR CCA 90 bp TCTTTTCCCTCTAGTTCTTTTGGCACAAGTTGTAACCTAATGCGACAAAGGTCCCTACCACCGCTCCACTaGATGTGCCACTTTGTCCAT +
Preference number: 2 (lower is better)
Translates to: SFPSSSFGTSCNLMRQRSLPPLH*MCHFVH
Trigger: ATGGACAAAGTGGCACATCCAGTGGAGCGGTGGTAG...GGACCTTTGTCGCATTAGGTTACAACTTGTGCCAAAAGAACTAGAGGGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR-3UTR CCA 90 bp AGTATTGGAGGGCACAGAAGGGTGATAGTCTTGGTTTTTATATTTGTCCTTCACTGGGGTCTACTTGAGTaGGGAAGGTGGGAGGAACAG +
Preference number: 2 (lower is better)
Translates to: SIGGHRRVIVLVFIFVLHWGLLE*GRWEEQ
Trigger: CTGTTCCTCCCACCTTCCCCACTCAAGTAGACCCCA...GTGAAGGACAAATATAAAAACCAAGACTATCACCCTTCTGTGCCCTCCAATACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR-3UTR TCA 90 bp TCTTTTCCCTCTAGTTCTTTTGGCACAAGTTGTAACCTAATGCGACAAAGGTCCTGCTCACCATGGATGTaGTTCAGCATGAGAGAGGTG +
Preference number: 2 (lower is better)
Translates to: SFPSSSFGTSCNLMRQRSCSPWM*FSMREV
Trigger: CACCTCTCTCATGCTGAATCACATCCATGGTGAGCA...GGACCTTTGTCGCATTAGGTTACAACTTGTGCCAAAAGAACTAGAGGGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR-3UTR TCA 90 bp TCTTTTCCCTCTAGTTCTTTTGGCACAAGTTGTAACCTAATGCGACAAAGGTCCCTGTGGAAGGAGACATaGGTAAGCAGAATGTCTGCT +
Preference number: 2 (lower is better)
Translates to: SFPSSSFGTSCNLMRQRSLWKET*VSRMSA
Trigger: AGCAGACATTCTGCTTACTCATGTCTCCTTCCACAG...GGACCTTTGTCGCATTAGGTTACAACTTGTGCCAAAAGAACTAGAGGGAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR-3UTR GCA 90 bp CCAACTCTACAAAAGTATTGGAGGGCACAGAAGGGTGATAGTCTTGGTTTTTATAAGTTCAGGGGTACATaGGCAGGAAGTGCTGGTTTG +
Preference number: 2 (lower is better)
Translates to: PTLQKYWRAQKGDSLGFYKFRGT*AGSAGL
Trigger: CAAACCAGCACTTCCTGCGCATGTACCCCTGAACTT...ATAAAAACCAAGACTATCACCCTTCTGTGCCCTCCAATACTTTTGTAGAGTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR-3UTR TCA 90 bp CCAACTCTACAAAAGTATTGGAGGGCACAGAAGGGTGATAGTCTTGGTTTTTATGTTGTACAGCAGGTCTaGCTACAGGCAATAAGTTGG +
Preference number: 2 (lower is better)
Translates to: PTLQKYWRAQKGDSLGFYVVQQV*LQAISW
Trigger: CCAACTTATTGCCTGTAGTCAGACCTGCTGTACAAC...ATAAAAACCAAGACTATCACCCTTCTGTGCCCTCCAATACTTTTGTAGAGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR-3UTR TCA 90 bp TGTGTTGTTTCCCTCTATGTGTCCACGTGTTCTCATTTAGCTCCCACTTACAAGTCCCTGCAAAGGGCATaGTCTTGTTCTTTCTTTATG +
Preference number: 2 (lower is better)
Translates to: CVVSLYVSTCSHLAPTYKSLQRA*SCSFFM
Trigger: CATAAAGAAAGAACAAGATCATGCCCTTTGCAGGGA...CTTGTAAGTGGGAGCTAAATGAGAACACGTGGACACATAGAGGGAAACAACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR-3UTR TCA 90 bp TCTTTTCCCTCTAGTTCTTTTGGCACAAGTTGTAACCTAATGCGACAAAGGTCCGCTCCCACTTACAAGTaGGAATATGGAGTGTTTGGT +
Preference number: 2 (lower is better)
Translates to: SFPSSSFGTSCNLMRQRSAPTYK*EYGVFG
Trigger: ACCAAACACTCCATATTCTCACTTGTAAGTGGGAGC...GGACCTTTGTCGCATTAGGTTACAACTTGTGCCAAAAGAACTAGAGGGAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR-3UTR GCA 90 bp TGTGTTGTTTCCCTCTATGTGTCCACGTGTTCTCATTTAGCTCCCACTTACAAGGAAGAAAGGTTTAGATaGAAAGGGAGCGAGGAAGTA +
Preference number: 2 (lower is better)
Translates to: CVVSLYVSTCSHLAPTYKEERFR*KGSEEV
Trigger: TACTTCCTCGCTCCCTTTGCATCTAAACCTTTCTTC...CTTGTAAGTGGGAGCTAAATGAGAACACGTGGACACATAGAGGGAAACAACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR-3UTR CCA 90 bp CAAACTAACACACGACCAGGAACAGAAAACCAAATACCAAGTATAGCATGTTCTGATTTCCAGAGGGTGTaGCTGTTAGTGTGTCTCTCT +
Preference number: 2 (lower is better)
Translates to: QTNTRPGTENQIPSIACSDFQRV*LLVCLS
Trigger: AGAGAGACACACTAACAGCCACACCCTCTGGAAATC...AGAACATGCTATACTTGGTATTTGGTTTTCTGTTCCTGGTCGTGTGTTAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR-3UTR TCA 90 bp CTGCTTTTAGTATCATCTCACCCGTGGCAGAAGAAAGAGGTTCTTCCCAATTTACTTTCTATTATACTTTaGTTGGCATGGGCCAATCTG +
Preference number: 2 (lower is better)
Translates to: LLLVSSHPWQKKEVLPNLLSIIL*LAWANL
Trigger: CAGATTGGCCCATGCCAATCAAAGTATAATAGAAAG...TAAATTGGGAAGAACCTCTTTCTTCTGCCACGGGTGAGATGATACTAAAAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR-3UTR GCA 90 bp AGTACTGAGAAAAACATCCCTTTACTCAAGTGTCAGATGTCAGAGTGCTCTAACGCTTCCTTGTGCTTTTaGTGTGCCATAGGTTACTAT +
Preference number: 2 (lower is better)
Translates to: STEKNIPLLKCQMSECSNASLCF*CAIGYY
Trigger: ATAGTAACCTATGGCACAGCAAAAGCACAAGGAAGC...GTTAGAGCACTCTGACATCTGACACTTGAGTAAAGGGATGTTTTTCTCAGTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR-3UTR GCA 90 bp CCAACTCTACAAAAGTATTGGAGGGCACAGAAGGGTGATAGTCTTGGTTTTTATTATCCCTCACCCCCATaGTTTACTCTGTACTATTTT +
Preference number: 2 (lower is better)
Translates to: PTLQKYWRAQKGDSLGFYYPSPP*FTLYYF
Trigger: AAAATAGTACAGAGTAAAGCATGGGGGTGAGGGATA...ATAAAAACCAAGACTATCACCCTTCTGTGCCCTCCAATACTTTTGTAGAGTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR-3UTR CCA 90 bp CCAACTCTACAAAAGTATTGGAGGGCACAGAAGGGTGATAGTCTTGGTTTTTATAAGTCACAAGTGATTTaGAATGTGAGGTTATCCCTC +
Preference number: 2 (lower is better)
Translates to: PTLQKYWRAQKGDSLGFYKSQVI*NVRLSL
Trigger: GAGGGATAACCTCACATTCCAAATCACTTGTGACTT...ATAAAAACCAAGACTATCACCCTTCTGTGCCCTCCAATACTTTTGTAGAGTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR CAA 90 bp AGGAAGTGCTGGTTTGTTACATACATAAAGGTGTGTCATGGGGGTTaGTTACACAGATTATTTCATCACCCTAAGTATCCATTAGTTATT +
Preference number: 2 (lower is better)
Translates to: RKCWFVTYIKVCHGG*LHRLFHHPKYPLVI
Trigger: AATAACTAATGGATACTTAGGGTGATGAAATAATCTGTGTAACAAACCCCCATGACACACCTTTATGTATGTAACAAACCAGCACTTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR CCA 72 bp GAGCCCCATGTCTATCAGGATCTACCACCGCTCCACTaGATGTGCCACTTTGTCCATCAAAATGCTCACCAT +
Preference number: 3 (lower is better)
Translates to: EPHVYQDLPPLH*MCHFVHQNAHH
Trigger: ATGGTGAGCATTTTGATGGACAAAGTGGCACATCCAGTGGAGCGGTGGTAGATCCTGATAGACATGGGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR TCA 72 bp GTGCCACTTTGTCCATCAAAATGCTCACCATGGATGTaGTTCAGCATGAGAGAGGTGGGCAGAGTGGGGAAA +
Preference number: 3 (lower is better)
Translates to: VPLCPSKCSPWM*FSMREVGRVGK
Trigger: TTTCCCCACTCTGCCCACCTCTCTCATGCTGAATCACATCCATGGTGAGCATTTTGATGGACAAAGTGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR GCA 72 bp CATGTCTATCAGGATCTACCACCGCTCCACTGGATGTaGCACTTTGTCCATCAAAATGCTCACCATGGATGT +
Preference number: 3 (lower is better)
Translates to: HVYQDLPPLHWM*HFVHQNAHHGC
Trigger: ACATCCATGGTGAGCATTTTGATGGACAAAGTGGCACATCCAGTGGAGCGGTGGTAGATCCTGATAGACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR CCA 72 bp AGTAATACCTACAGAGGTGAGCTAATGGATGGTACATaGAGTAGGGACTGCAGAGACCCTAGTTTTGTCCCC +
Preference number: 3 (lower is better)
Translates to: SNTYRGELMDGT*SRDCRDPSFVP
Trigger: GGGGACAAAACTAGGGTCTCTGCAGTCCCTACTCCATGTACCATCCATTAGCTCACCTCTGTAGGTATTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR-3UTR CAA 90 bp CTAACAGATAACCACAGAGGGACCTTTCCAGCCATTGGAAAGACATTCAAGAGGACTGGATGTGCCACTTaGTCCATCAAAATGCTCACC +
Preference number: 3 (lower is better)
Translates to: LTDNHRGTFPAIGKTFKRTGCAT*SIKMLT
Trigger: GGTGAGCATTTTGATGGACAAAGTGGCACATCCAGT...CCTCTTGAATGTCTTTCCAATGGCTGGAAAGGTCCCTCTGTGGTTATCTGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR TCA 72 bp ATTCCCTTAAGTGTGCCACGCTGCAGGACTGACAAATaGAATCCATCCTACGAAAAACAGCCCAGGAACAAG +
Preference number: 3 (lower is better)
Translates to: IPLSVPRCRTDK*NPSYEKQPRNK
Trigger: CTTGTTCCTGGGCTGTTTTTCGTAGGATGGATTTCATTTGTCAGTCCTGCAGCGTGGCACACTTAAGGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR GCA 72 bp ATGAAGGATAATGGCCTCCAGCTCCATCCATGTCCCTaGAAAGGGCATGATCTTGTTCTTTCTTTATGGCTG +
Preference number: 3 (lower is better)
Translates to: MKDNGLQLHPCP*KGHDLVLSLWL
Trigger: CAGCCATAAAGAAAGAACAAGATCATGCCCTTTGCAGGGACATGGATGGAGCTGGAGGCCATTATCCTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR CCA 72 bp AGTCATATATTTACTGTATCAGATTTCCAGAGGGTGTaGCTGTTAGTGTGTCTCTCTACTCCCAGGAGCCCC +
Preference number: 3 (lower is better)
Translates to: SHIFTVSDFQRV*LLVCLSTPRSP
Trigger: GGGGCTCCTGGGAGTAGAGAGACACACTAACAGCCACACCCTCTGGAAATCTGATACAGTAAATATATGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR-3UTR CAA 90 bp TGTGTTGTTTCCCTCTATGTGTCCACGTGTTCTCATTTAGCTCCCACTTACAAGGGAAGAGGAAATAGGTaGTACAGCAGGTCTGACTAC +
Preference number: 3 (lower is better)
Translates to: CVVSLYVSTCSHLAPTYKGRGNR*YSRSDY
Trigger: GTAGTCAGACCTGCTGTACAACCTATTTCCTCTTCC...CTTGTAAGTGGGAGCTAAATGAGAACACGTGGACACATAGAGGGAAACAACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR GCA 72 bp CAGAAAAATGAGGTCATCCTGGGAGTGACCCAGAGATaGTCTCTAGGGATGTACCTCTTGATGTTCTTGTTA +
Preference number: 3 (lower is better)
Translates to: QKNEVILGVTQR*SLGMYLLMFLL
Trigger: TAACAAGAACATCAAGAGGTACATCCCTAGAGAGCATCTCTGGGTCACTCCCAGGATGACCTCATTTTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR CCA 72 bp AGTTGTAACCTAATGCGACAAAGGTCCCTCATGAGATaGCTTAAAACTAGCAGTGTCGCTAGGCTCTTTAGG +
Preference number: 3 (lower is better)
Translates to: SCNLMRQRSLMR*LKTSSVARLFR
Trigger: CCTAAAGAGCCTAGCGACACTGCTAGTTTTAAGCCATCTCATGAGGGACCTTTGTCGCATTAGGTTACAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR-3UTR CAA 90 bp TCTTTTCCCTCTAGTTCTTTTGGCACAAGTTGTAACCTAATGCGACAAAGGTCCGGACCTTTCCAGCCATaGGAAAGACATTCAAGAGGA +
Preference number: 3 (lower is better)
Translates to: SFPSSSFGTSCNLMRQRSGPFQP*ERHSRG
Trigger: TCCTCTTGAATGTCTTTCCAATGGCTGGAAAGGTCC...GGACCTTTGTCGCATTAGGTTACAACTTGTGCCAAAAGAACTAGAGGGAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR-3UTR CAA 90 bp CAAACTAACACACGACCAGGAACAGAAAACCAAATACCAAGTATAGCATGTTCTGCTTTCTATTATACTTaGATTGGCATGGGCCAATCT +
Preference number: 3 (lower is better)
Translates to: QTNTRPGTENQIPSIACSAFYYT*IGMGQS
Trigger: AGATTGGCCCATGCCAATCAAAGTATAATAGAAAGC...AGAACATGCTATACTTGGTATTTGGTTTTCTGTTCCTGGTCGTGTGTTAGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR CCA 72 bp TGTTATTTTCTCCTGCTTTTAGTATCATCTCACCCGTaGCAGAAGAAAGAGGTTCTTCCCAATTTAACACAA +
Preference number: 3 (lower is better)
Translates to: CYFLLLLVSSHP*QKKEVLPNLTQ
Trigger: TTGTGTTAAATTGGGAAGAACCTCTTTCTTCTGCCACGGGTGAGATGATACTAAAAGCAGGAGAAAATAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR TCA 72 bp CAGATGTCAGAGTGCTCTAACTGCTCAACTCATAAGTaGATACAACTAAGTAATTTCTGGTCCCCTAAAAAT +
Preference number: 3 (lower is better)
Translates to: QMSECSNCSTHK*IQLSNFWSPKN
Trigger: ATTTTTAGGGGACCAGAAATTACTTAGTTGTATTCACTTATGAGTTGAGCAGTTAGAGCACTCTGACATCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp CCCTCCTCCCACCTTCCGCCCTCTCATAGGCCCCAGTGTGTGTTGTTTCCCTCTCGAGCCAAACCGACCTaGGGGCTGGAAGCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: PSSHLPPSHRPQCVLFPSRAKPT*GLEAFK
Trigger: CTTGAAGGCTTCCAGCCCTCAGGTCGGTTTGGCTCG...AGAGGGAAACAACACACACTGGGGCCTATGAGAGGGCGGAAGGTGGGAGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp CCTGCTTTCCTCTCCGGCCCTTACAGTAGCGTGTGGCTCAGGCCACATCTTTTCCTGAGCAGCAGAGGCTaGGCGTCAGATGTGAGTGCG +
Preference number: 4 (lower is better)
Translates to: PAFLSGPYSSVWLRPHLFLSSRG*ASDVSA
Trigger: CGCACTCACATCTGACGCGCAGCCTCTGCTGCTCAG...GAAAAGATGTGGCCTGAGCCACACGCTACTGTAAGGGCCGGAGAGGAAAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp CCTGCTTTCCTCTCCGGCCCTTACAGTAGCGTGTGGCTCAGGCCACATCTTTTCGCTATAGACGTGAAGTaGCCCGGAGAGTCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PAFLSGPYSSVWLRPHLFAIDVK*PGESGS
Trigger: GGAGCCCGACTCTCCGGGGCACTTCACGTCTATAGC...GAAAAGATGTGGCCTGAGCCACACGCTACTGTAAGGGCCGGAGAGGAAAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp CCTGCTTTCCTCTCCGGCCCTTACAGTAGCGTGTGGCTCAGGCCACATCTTTTCCTGGTTGAGGTCAGCTaGGGTCATTGCCCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: PAFLSGPYSSVWLRPHLFLVEVS*GHCPAK
Trigger: CTTGGCTGGGCAATGACCTCAGCTGACCTCAACCAG...GAAAAGATGTGGCCTGAGCCACACGCTACTGTAAGGGCCGGAGAGGAAAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp CCTGCTTTCCTCTCCGGCCCTTACAGTAGCGTGTGGCTCAGGCCACATCTTTTCGGTCATTGCCGTAGATaGGGTACACGCGCCCGATGT +
Preference number: 4 (lower is better)
Translates to: PAFLSGPYSSVWLRPHLFGHCRR*GTRARC
Trigger: ACATCGGGCGCGTGTACCTCATCTACGGCAATGACC...GAAAAGATGTGGCCTGAGCCACACGCTACTGTAAGGGCCGGAGAGGAAAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp CCTGCTTTCCTCTCCGGCCCTTACAGTAGCGTGTGGCTCAGGCCACATCTTTTCAGAGAGAACCCAACATaGTCAGCAGGCCAGGCCACA +
Preference number: 4 (lower is better)
Translates to: PAFLSGPYSSVWLRPHLFRENPT*SAGQAT
Trigger: TGTGGCCTGGCCTGCTGATCATGTTGGGTTCTCTCT...GAAAAGATGTGGCCTGAGCCACACGCTACTGTAAGGGCCGGAGAGGAAAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp ATCCTGGGAGTGACCCAGAGATGCTCTCTAGGGATGTACCTCTTGATGTTCTTGCGGCACCTTTGTAGGTaGGCTGCTCGGAGCCCACCG +
Preference number: 4 (lower is better)
Translates to: ILGVTQRCSLGMYLLMFLRHLCR*AARSPP
Trigger: CGGTGGGCTCCGAGCAGCTCACCTACAAAGGTGCCG...CAAGAACATCAAGAGGTACATCCCTAGAGAGCATCTCTGGGTCACTCCCAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp CCTGCTTTCCTCTCCGGCCCTTACAGTAGCGTGTGGCTCAGGCCACATCTTTTCTTGCTGGCCGCCACATaGAATGAACAGAGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: PAFLSGPYSSVWLRPHLFLLAAT*NEQRVL
Trigger: GAGAACCCTCTGTTCATTGCATGTGGCGGCCAGCAA...GAAAAGATGTGGCCTGAGCCACACGCTACTGTAAGGGCCGGAGAGGAAAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp CCTGCTTTCCTCTCCGGCCCTTACAGTAGCGTGTGGCTCAGGCCACATCTTTTCCTTTGTCGCTCAGGCTaGGGCCAGAATAAAACGCAG +
Preference number: 4 (lower is better)
Translates to: PAFLSGPYSSVWLRPHLFLCRSG*GQNKTQ
Trigger: CTGCGTTTTATTCTGGCCCCAGCCTGAGCGACAAAG...GAAAAGATGTGGCCTGAGCCACACGCTACTGTAAGGGCCGGAGAGGAAAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp CCTGCTTTCCTCTCCGGCCCTTACAGTAGCGTGTGGCTCAGGCCACATCTTTTCGCTTTGGCCGTTTGGTaGGAAGTAGCCATACACCCT +
Preference number: 4 (lower is better)
Translates to: PAFLSGPYSSVWLRPHLFALAVW*EVAIHP
Trigger: AGGGTGTATGGCTACTTCCCACCAAACGGCCAAAGC...GAAAAGATGTGGCCTGAGCCACACGCTACTGTAAGGGCCGGAGAGGAAAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp CCCTCCTCCCACCTTCCGCCCTCTCATAGGCCCCAGTGTGTGTTGTTTCCCTCTGTGAAATCTTCAATCTaGGCCAAGGCTATAGACGTG +
Preference number: 4 (lower is better)
Translates to: PSSHLPPSHRPQCVLFPSVKSSI*AKAIDV
Trigger: CACGTCTATAGCCTTGGCTCAGATTGAAGATTTCAC...AGAGGGAAACAACACACACTGGGGCCTATGAGAGGGCGGAAGGTGGGAGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp CCTGCTTTCCTCTCCGGCCCTTACAGTAGCGTGTGGCTCAGGCCACATCTTTTCGCCACGCTGCAGGACTaGCAAATGAAATCCATCCTA +
Preference number: 4 (lower is better)
Translates to: PAFLSGPYSSVWLRPHLFATLQD*QMKSIL
Trigger: TAGGATGGATTTCATTTGTCAGTCCTGCAGCGTGGC...GAAAAGATGTGGCCTGAGCCACACGCTACTGTAAGGGCCGGAGAGGAAAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp CCCTCCTCCCACCTTCCGCCCTCTCATAGGCCCCAGTGTGTGTTGTTTCCCTCTTTAACCTCCACCTGGTaGTTGCTATTGGGTGTATTC +
Preference number: 4 (lower is better)
Translates to: PSSHLPPSHRPQCVLFPSLTSTW*LLLGVF
Trigger: GAATACACCCAATAGCAAGCACCAGGTGGAGGTTAA...AGAGGGAAACAACACACACTGGGGCCTATGAGAGGGCGGAAGGTGGGAGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp CTGCTTTTAGTATCATCTCACCCGTGGCAGAAGAAAGAGGTTCTTCCCAATTTAGGGGCGGCTGTAGCCTaGTGCGCCCACCACGAGGTC +
Preference number: 4 (lower is better)
Translates to: LLLVSSHPWQKKEVLPNLGAAVA*CAHHEV
Trigger: GACCTCGTGGTGGGCGCACCAGGCTACAGCCGCCCC...TAAATTGGGAAGAACCTCTTTCTTCTGCCACGGGTGAGATGATACTAAAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp ATCCTGGGAGTGACCCAGAGATGCTCTCTAGGGATGTACCTCTTGATGTTCTTGCCAGACTATGCCAGCTaGCATCTGCCGCCATGTGAG +
Preference number: 4 (lower is better)
Translates to: ILGVTQRCSLGMYLLMFLPDYAS*HLPPCE
Trigger: CTCACATGGCGGCAGATGTCAGCTGGCATAGTCTGG...CAAGAACATCAAGAGGTACATCCCTAGAGAGCATCTCTGGGTCACTCCCAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp ATCCTGGGAGTGACCCAGAGATGCTCTCTAGGGATGTACCTCTTGATGTTCTTGTCAAGGCCCAGACTATaGCAGCTGACATCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: ILGVTQRCSLGMYLLMFLSRPRL*QLTSAA
Trigger: GGCGGCAGATGTCAGCTGGCATAGTCTGGGCCTTGA...CAAGAACATCAAGAGGTACATCCCTAGAGAGCATCTCTGGGTCACTCCCAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp CTGCTTTTAGTATCATCTCACCCGTGGCAGAAGAAAGAGGTTCTTCCCAATTTAGCGGCTGTAGCCTGGTaGGCCCACCACGAGGTCACC +
Preference number: 4 (lower is better)
Translates to: LLLVSSHPWQKKEVLPNLAAVAW*AHHEVT
Trigger: GGTGACCTCGTGGTGGGCGCACCAGGCTACAGCCGC...TAAATTGGGAAGAACCTCTTTCTTCTGCCACGGGTGAGATGATACTAAAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp CCTGCTTTCCTCTCCGGCCCTTACAGTAGCGTGTGGCTCAGGCCACATCTTTTCAAGATGCTAAGGGGCTaGAGACGTGCTTTTGTGACA +
Preference number: 4 (lower is better)
Translates to: PAFLSGPYSSVWLRPHLFKMLRG*RRAFVT
Trigger: TGTCACAAAAGCACGTCTCCAGCCCCTTAGCATCTT...GAAAAGATGTGGCCTGAGCCACACGCTACTGTAAGGGCCGGAGAGGAAAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp ATAACCACAGAGGGACCTTTCCAGCCATTGGAAAGACATTCAAGAGGAAGAGGACACCGGCTTCTCTGGTaGCGTGGGAATGCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: ITTEGPFQPLERHSRGRGHRLLW*RGNAQS
Trigger: GCTCTGAGCATTCCCACGTCACCAGAGAAGCCGGTG...TCCTCTTCCTCTTGAATGTCTTTCCAATGGCTGGAAAGGTCCCTCTGTGGTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp CCTGCTTTCCTCTCCGGCCCTTACAGTAGCGTGTGGCTCAGGCCACATCTTTTCAGTGGGGAAATGCAGTaGAATCTTCAATCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: PAFLSGPYSSVWLRPHLFSGEMQ*NLQSEP
Trigger: TGGCTCAGATTGAAGATTTCACTGCATTTCCCCACT...GAAAAGATGTGGCCTGAGCCACACGCTACTGTAAGGGCCGGAGAGGAAAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp ATCCTGGGAGTGACCCAGAGATGCTCTCTAGGGATGTACCTCTTGATGTTCTTGGGATGTGATTCAGCATaGGAGAGGTGGGCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: ILGVTQRCSLGMYLLMFLGCDSA*ERWAEW
Trigger: CCACTCTGCCCACCTCTCTCATGCTGAATCACATCC...CAAGAACATCAAGAGGTACATCCCTAGAGAGCATCTCTGGGTCACTCCCAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp CCTGCTTTCCTCTCCGGCCCTTACAGTAGCGTGTGGCTCAGGCCACATCTTTTCGCTCCCACTTACAAGTaGGAATATGGAGTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: PAFLSGPYSSVWLRPHLFAPTYK*EYGVFG
Trigger: ACCAAACACTCCATATTCTCACTTGTAAGTGGGAGC...GAAAAGATGTGGCCTGAGCCACACGCTACTGTAAGGGCCGGAGAGGAAAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp CCCTCCTCCCACCTTCCGCCCTCTCATAGGCCCCAGTGTGTGTTGTTTCCCTCTGAAAAGACCCAGTACTaGGAAAAACATCCCTTTACT +
Preference number: 4 (lower is better)
Translates to: PSSHLPPSHRPQCVLFPSEKTQY*EKHPFT
Trigger: AGTAAAGGGATGTTTTTCTCAGTACTGGGTCTTTTC...AGAGGGAAACAACACACACTGGGGCCTATGAGAGGGCGGAAGGTGGGAGGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp CCTGCTTTCCTCTCCGGCCCTTACAGTAGCGTGTGGCTCAGGCCACATCTTTTCCTTGTGCTTTTGCTGTaGCATAGGTTACTATGCAGC +
Preference number: 4 (lower is better)
Translates to: PAFLSGPYSSVWLRPHLFLVLLL*HRLLCS
Trigger: GCTGCATAGTAACCTATGGCACAGCAAAAGCACAAG...GAAAAGATGTGGCCTGAGCCACACGCTACTGTAAGGGCCGGAGAGGAAAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp AGTATTGGAGGGCACAGAAGGGTGATAGTCTTGGTTTTTATATTTGTCCTTCACTACACGCGCCCGATGTaGATGTGGCCGGGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: SIGGHRRVIVLVFIFVLHYTRPM*MWPGRL
Trigger: CAGCCGCCCCGGCCACATCCACATCGGGCGCGTGTA...GTGAAGGACAAATATAAAAACCAAGACTATCACCCTTCTGTGCCCTCCAATACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp ATCCTGGGAGTGACCCAGAGATGCTCTCTAGGGATGTACCTCTTGATGTTCTTGGGAGCTCCCAAACCTTaGGCTGGCTTCAGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: ILGVTQRCSLGMYLLMFLGAPKP*AGFRRN
Trigger: ATTTCTCCTGAAGCCAGCTCAAGGTTTGGGAGCTCC...CAAGAACATCAAGAGGTACATCCCTAGAGAGCATCTCTGGGTCACTCCCAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp CTAACAGATAACCACAGAGGGACCTTTCCAGCCATTGGAAAGACATTCAAGAGGCTGGTGACGTGGGAATaGTCAGAGCTGCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: LTDNHRGTFPAIGKTFKRLVTWE*SELQQH
Trigger: GTGCTGCTGCAGCTCTGAGCATTCCCACGTCACCAG...CCTCTTGAATGTCTTTCCAATGGCTGGAAAGGTCCCTCTGTGGTTATCTGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp ATCCTGGGAGTGACCCAGAGATGCTCTCTAGGGATGTACCTCTTGATGTTCTTGGTCTCCATTCACATCTaGAGCCAAGAGAGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: ILGVTQRCSLGMYLLMFLVSIHI*SQESPA
Trigger: GGCTGGACTCTCTTGGCTGCAGATGTGAATGGAGAC...CAAGAACATCAAGAGGTACATCCCTAGAGAGCATCTCTGGGTCACTCCCAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp CTAACAGATAACCACAGAGGGACCTTTCCAGCCATTGGAAAGACATTCAAGAGGCTTCCCTCCACCTGGTaGAAAAGGGGAGCCGATGAC +
Preference number: 4 (lower is better)
Translates to: LTDNHRGTFPAIGKTFKRLPSTW*KRGADD
Trigger: GTCATCGGCTCCCCTTTTGCACCAGGTGGAGGGAAG...CCTCTTGAATGTCTTTCCAATGGCTGGAAAGGTCCCTCTGTGGTTATCTGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp CTGCTTTTAGTATCATCTCACCCGTGGCAGAAGAAAGAGGTTCTTCCCAATTTACGAGTGGCTCCGCCTTaGTGTAGGGTCACGGTCAGG +
Preference number: 4 (lower is better)
Translates to: LLLVSSHPWQKKEVLPNLRVAPP*CRVTVR
Trigger: CCTGACCGTGACCCTACACCAAGGCGGAGCCACTCG...TAAATTGGGAAGAACCTCTTTCTTCTGCCACGGGTGAGATGATACTAAAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp CTGCTTTTAGTATCATCTCACCCGTGGCAGAAGAAAGAGGTTCTTCCCAATTTAGCTGCGCGTCAGATGTaGGTGCGTACATGCGAGTGG +
Preference number: 4 (lower is better)
Translates to: LLLVSSHPWQKKEVLPNLAARQM*VRTCEW
Trigger: CCACTCGCATGTACGCACTCACATCTGACGCGCAGC...TAAATTGGGAAGAACCTCTTTCTTCTGCCACGGGTGAGATGATACTAAAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp CCTGCTTTCCTCTCCGGCCCTTACAGTAGCGTGTGGCTCAGGCCACATCTTTTCACATGGAGTTATCCATaGTTTGCATTTGCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: PAFLSGPYSSVWLRPHLFTWSYP*FAFASH
Trigger: ATGACTGGCAAATGCAAATCATGGATAACTCCATGT...GAAAAGATGTGGCCTGAGCCACACGCTACTGTAAGGGCCGGAGAGGAAAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp TGTGTTGTTTCCCTCTATGTGTCCACGTGTTCTCATTTAGCTCCCACTTACAAGCCCTGGGTGTGGTTTTaGTGGCCGCCACATGCAATG +
Preference number: 4 (lower is better)
Translates to: CVVSLYVSTCSHLAPTYKPWVWF*WPPHAM
Trigger: CATTGCATGTGGCGGCCAGCAAAACCACACCCAGGG...CTTGTAAGTGGGAGCTAAATGAGAACACGTGGACACATAGAGGGAAACAACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp TGTGTTGTTTCCCTCTATGTGTCCACGTGTTCTCATTTAGCTCCCACTTACAAGCCTTCAAGGATCCTGTaGGCCTCCTTGTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: CVVSLYVSTCSHLAPTYKPSRIL*ASLSRS
Trigger: GGACCTGGACAAGGAGGCCCACAGGATCCTTGAAGG...CTTGTAAGTGGGAGCTAAATGAGAACACGTGGACACATAGAGGGAAACAACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp CTGCTTTTAGTATCATCTCACCCGTGGCAGAAGAAAGAGGTTCTTCCCAATTTAAATGGCCCAGCCTGCTaGCATTCTTCCAGGTCGGGC +
Preference number: 4 (lower is better)
Translates to: LLLVSSHPWQKKEVLPNLNGPAC*HSSRSG
Trigger: GCCCGACCTGGAAGAATGCCAGCAGGCTGGGCCATT...TAAATTGGGAAGAACCTCTTTCTTCTGCCACGGGTGAGATGATACTAAAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp TCTTTTCCCTCTAGTTCTTTTGGCACAAGTTGTAACCTAATGCGACAAAGGTCCGGCCGCCACATGCAATaGACAGAGGGTTCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: SFPSSSFGTSCNLMRQRSGRHMQ*TEGSQA
Trigger: TGCCTGAGAACCCTCTGTTCATTGCATGTGGCGGCC...GGACCTTTGTCGCATTAGGTTACAACTTGTGCCAAAAGAACTAGAGGGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp CTGCTTTTAGTATCATCTCACCCGTGGCAGAAGAAAGAGGTTCTTCCCAATTTAACACTGGGGTCTACTTaGGTGGGGAAGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: LLLVSSHPWQKKEVLPNLTLGST*VGKVGG
Trigger: TCCTCCCACCTTCCCCACTCAAGTAGACCCCAGTGT...TAAATTGGGAAGAACCTCTTTCTTCTGCCACGGGTGAGATGATACTAAAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp CCTGCTTTCCTCTCCGGCCCTTACAGTAGCGTGTGGCTCAGGCCACATCTTTTCAAACAATTCCTATCTTaGAGCCTTGAGAAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: PAFLSGPYSSVWLRPHLFKQFLS*SLEKSC
Trigger: ACAGCTTTTCTCAAGGCTTCAAGATAGGAATTGTTT...GAAAAGATGTGGCCTGAGCCACACGCTACTGTAAGGGCCGGAGAGGAAAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp TGTGTTGTTTCCCTCTATGTGTCCACGTGTTCTCATTTAGCTCCCACTTACAAGGCCACAATTCCCTTCTaGTTCCCTCCACCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: CVVSLYVSTCSHLAPTYKATIPF*FPPPGA
Trigger: TGCACCAGGTGGAGGGAAGCAGAAGGGAATTGTGGC...CTTGTAAGTGGGAGCTAAATGAGAACACGTGGACACATAGAGGGAAACAACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp ATAACCACAGAGGGACCTTTCCAGCCATTGGAAAGACATTCAAGAGGAAGAGGAGGTCACGGTCAGGAATaGCACCTTAGACACGTCATC +
Preference number: 4 (lower is better)
Translates to: ITTEGPFQPLERHSRGRGGHGQE*HLRHVI
Trigger: GATGACGTGTCTAAGGTGGCATTCCTGACCGTGACC...TCCTCTTCCTCTTGAATGTCTTTCCAATGGCTGGAAAGGTCCCTCTGTGGTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp TCTTTTCCCTCTAGTTCTTTTGGCACAAGTTGTAACCTAATGCGACAAAGGTCCCGCGTCAGATGTGAGTaGGTACATGCGAGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SFPSSSFGTSCNLMRQRSRVRCE*VHASGS
Trigger: GGAGCCACTCGCATGTACGCACTCACATCTGACGCG...GGACCTTTGTCGCATTAGGTTACAACTTGTGCCAAAAGAACTAGAGGGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp ATAACCACAGAGGGACCTTTCCAGCCATTGGAAAGACATTCAAGAGGAAGAGGATCCAGGTCACTCAAGTaGAGAACGCCACCAAATCGG +
Preference number: 4 (lower is better)
Translates to: ITTEGPFQPLERHSRGRGSRSLK*RTPPNR
Trigger: CCGATTTGGTGGCGTTCTGCACTTGAGTGACCTGGA...TCCTCTTCCTCTTGAATGTCTTTCCAATGGCTGGAAAGGTCCCTCTGTGGTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp AGTACTGAGAAAAACATCCCTTTACTCAAGTGTCAGATGTCAGAGTGCTCTAACAGCGAGGCCAAGGCCTaGTTTCCTCTCCGGCCCTTA +
Preference number: 4 (lower is better)
Translates to: STEKNIPLLKCQMSECSNSEAKA*FPLRPL
Trigger: TAAGGGCCGGAGAGGAAAGCAGGCCTTGGCCTCGCT...GTTAGAGCACTCTGACATCTGACACTTGAGTAAAGGGATGTTTTTCTCAGTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp ATAACCACAGAGGGACCTTTCCAGCCATTGGAAAGACATTCAAGAGGAAGAGGATGCATTTTTGAGCCCTaGGTGTGGTTTTGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: ITTEGPFQPLERHSRGRGCIFEP*VWFCWP
Trigger: CGGCCAGCAAAACCACACCCAGGGCTCAAAAATGCA...TCCTCTTCCTCTTGAATGTCTTTCCAATGGCTGGAAAGGTCCCTCTGTGGTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp ATCCTGGGAGTGACCCAGAGATGCTCTCTAGGGATGTACCTCTTGATGTTCTTGCCATTCATCAGTACGTaGCCACTGGAAAGGGAAGTA +
Preference number: 4 (lower is better)
Translates to: ILGVTQRCSLGMYLLMFLPFIST*PLEREV
Trigger: TACTTCCCTTTCCAGTGGCCACGTACTGATGAATGG...CAAGAACATCAAGAGGTACATCCCTAGAGAGCATCTCTGGGTCACTCCCAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp CTAACAGATAACCACAGAGGGACCTTTCCAGCCATTGGAAAGACATTCAAGAGGCTACCACCGCTCCACTaGATGTGCCACTTTGTCCAT +
Preference number: 4 (lower is better)
Translates to: LTDNHRGTFPAIGKTFKRLPPLH*MCHFVH
Trigger: ATGGACAAAGTGGCACATCCAGTGGAGCGGTGGTAG...CCTCTTGAATGTCTTTCCAATGGCTGGAAAGGTCCCTCTGTGGTTATCTGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR CAA 72 bp ATCAGGATCTACCACCGCTCCACTGGATGTGCCACTTaGTCCATCAAAATGCTCACCATGGATGTGATTCAG +
Preference number: 4 (lower is better)
Translates to: IRIYHRSTGCAT*SIKMLTMDVIQ
Trigger: CTGAATCACATCCATGGTGAGCATTTTGATGGACAAAGTGGCACATCCAGTGGAGCGGTGGTAGATCCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp ATAACCACAGAGGGACCTTTCCAGCCATTGGAAAGACATTCAAGAGGAAGAGGAAACACGATTCCAGCCTaGTACGCATCCTGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: ITTEGPFQPLERHSRGRGNTIPA*YASWCS
Trigger: AGAACACCAGGATGCGTATCAGGCTGGAATCGTGTT...TCCTCTTCCTCTTGAATGTCTTTCCAATGGCTGGAAAGGTCCCTCTGTGGTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp ATAACCACAGAGGGACCTTTCCAGCCATTGGAAAGACATTCAAGAGGAAGAGGAGGAGACGTGCTTTTGTaGCAACTGAGAGCCACCTAT +
Preference number: 4 (lower is better)
Translates to: ITTEGPFQPLERHSRGRGGDVLL*QLRATY
Trigger: ATAGGTGGCTCTCAGTTGTCACAAAAGCACGTCTCC...TCCTCTTCCTCTTGAATGTCTTTCCAATGGCTGGAAAGGTCCCTCTGTGGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp CTGCTTTTAGTATCATCTCACCCGTGGCAGAAGAAAGAGGTTCTTCCCAATTTATTTGAGCCCTGGGTGTaGTTTTGCTGGCCGCCACAT +
Preference number: 4 (lower is better)
Translates to: LLLVSSHPWQKKEVLPNLFEPWV*FCWPPH
Trigger: ATGTGGCGGCCAGCAAAACCACACCCAGGGCTCAAA...TAAATTGGGAAGAACCTCTTTCTTCTGCCACGGGTGAGATGATACTAAAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp AGTATTGGAGGGCACAGAAGGGTGATAGTCTTGGTTTTTATATTTGTCCTTCACTCACCGTGCCCATCCTaGTTGAGGTCAGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: SIGGHRRVIVLVFIFVLHSPCPS*LRSAEV
Trigger: GACCTCAGCTGACCTCAACCAGGATGGGCACGGTGA...GTGAAGGACAAATATAAAAACCAAGACTATCACCCTTCTGTGCCCTCCAATACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp TCTTTTCCCTCTAGTTCTTTTGGCACAAGTTGTAACCTAATGCGACAAAGGTCCAACCGACCTGAGGGCTaGAAGCCTTCAAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: SFPSSSFGTSCNLMRQRSNRPEG*KPSRIL
Trigger: CAGGATCCTTGAAGGCTTCCAGCCCTCAGGTCGGTT...GGACCTTTGTCGCATTAGGTTACAACTTGTGCCAAAAGAACTAGAGGGAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp CCAACTCTACAAAAGTATTGGAGGGCACAGAAGGGTGATAGTCTTGGTTTTTATCTGCTTCCCTCCACCTaGTGCAAAAGGGGAGCCGAT +
Preference number: 4 (lower is better)
Translates to: PTLQKYWRAQKGDSLGFYLLPST*CKRGAD
Trigger: ATCGGCTCCCCTTTTGCACCAGGTGGAGGGAAGCAG...ATAAAAACCAAGACTATCACCCTTCTGTGCCCTCCAATACTTTTGTAGAGTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp TCTTTTCCCTCTAGTTCTTTTGGCACAAGTTGTAACCTAATGCGACAAAGGTCCCTCTCACCGTCCAGTTaGCTGCCTCCACGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: SFPSSSFGTSCNLMRQRSLSPSS*LPPRSV
Trigger: AACTGAACGTGGAGGCAGCCAACTGGACGGTGAGAG...GGACCTTTGTCGCATTAGGTTACAACTTGTGCCAAAAGAACTAGAGGGAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp CAAACTAACACACGACCAGGAACAGAAAACCAAATACCAAGTATAGCATGTTCTGTGCGTACATGCGAGTaGCTCCGCCTTGGTGTAGGG +
Preference number: 4 (lower is better)
Translates to: QTNTRPGTENQIPSIACSVRTCE*LRLGVG
Trigger: CCCTACACCAAGGCGGAGCCACTCGCATGTACGCAC...AGAACATGCTATACTTGGTATTTGGTTTTCTGTTCCTGGTCGTGTGTTAGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp CTGCTTTTAGTATCATCTCACCCGTGGCAGAAGAAAGAGGTTCTTCCCAATTTATGGGGTCTACTTGAGTaGGGAAGGTGGGAGGAACAG +
Preference number: 4 (lower is better)
Translates to: LLLVSSHPWQKKEVLPNLWGLLE*GRWEEQ
Trigger: CTGTTCCTCCCACCTTCCCCACTCAAGTAGACCCCA...TAAATTGGGAAGAACCTCTTTCTTCTGCCACGGGTGAGATGATACTAAAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp CCAACTCTACAAAAGTATTGGAGGGCACAGAAGGGTGATAGTCTTGGTTTTTATCAAAAGGGGAGCCGATaGCCAGATCGGGTTCACTGT +
Preference number: 4 (lower is better)
Translates to: PTLQKYWRAQKGDSLGFYQKGSR*PDRVHC
Trigger: ACAGTGAACCCGATCTGGTCATCGGCTCCCCTTTTG...ATAAAAACCAAGACTATCACCCTTCTGTGCCCTCCAATACTTTTGTAGAGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp CTAACAGATAACCACAGAGGGACCTTTCCAGCCATTGGAAAGACATTCAAGAGGTTCTGTTGTCCACAGTaGCACCGTGAAGGGAATATC +
Preference number: 4 (lower is better)
Translates to: LTDNHRGTFPAIGKTFKRFCCPQ*HREGNI
Trigger: GATATTCCCTTCACGGTGTCACTGTGGACAACAGAA...CCTCTTGAATGTCTTTCCAATGGCTGGAAAGGTCCCTCTGTGGTTATCTGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp ATCCTGGGAGTGACCCAGAGATGCTCTCTAGGGATGTACCTCTTGATGTTCTTGACGTGCCATATCAGTTaGCCTTTTACAGTAGGAGTA +
Preference number: 4 (lower is better)
Translates to: ILGVTQRCSLGMYLLMFLTCHIS*PFTVGV
Trigger: TACTCCTACTGTAAAAGGTCAACTGATATGGCACGT...CAAGAACATCAAGAGGTACATCCCTAGAGAGCATCTCTGGGTCACTCCCAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp TGTGTTGTTTCCCTCTATGTGTCCACGTGTTCTCATTTAGCTCCCACTTACAAGACGGAGTCCAGTGAGTaGTCTCAGACACATCATGGA +
Preference number: 4 (lower is better)
Translates to: CVVSLYVSTCSHLAPTYKTESSE*SQTHHG
Trigger: TCCATGATGTGTCTGAGAGCACTCACTGGACTCCGT...CTTGTAAGTGGGAGCTAAATGAGAACACGTGGACACATAGAGGGAAACAACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp TCTTTTCCCTCTAGTTCTTTTGGCACAAGTTGTAACCTAATGCGACAAAGGTCCCACCGTCCAGTTGGCTaGCTCCACGTTCAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: SFPSSSFGTSCNLMRQRSHRPVG*LHVQFF
Trigger: GAAAAACTGAACGTGGAGGCAGCCAACTGGACGGTG...GGACCTTTGTCGCATTAGGTTACAACTTGTGCCAAAAGAACTAGAGGGAAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp CCAACTCTACAAAAGTATTGGAGGGCACAGAAGGGTGATAGTCTTGGTTTTTATACAAATGGCCCAGCCTaGTGGCATTCTTCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: PTLQKYWRAQKGDSLGFYTNGPA*WHSSRS
Trigger: CGACCTGGAAGAATGCCAGCAGGCTGGGCCATTTGT...ATAAAAACCAAGACTATCACCCTTCTGTGCCCTCCAATACTTTTGTAGAGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp CTAACAGATAACCACAGAGGGACCTTTCCAGCCATTGGAAAGACATTCAAGAGGACCCAGTTTCCCCATTaGCTTGTCTCCAGAAATGGT +
Preference number: 4 (lower is better)
Translates to: LTDNHRGTFPAIGKTFKRTQFPH*LVSRNG
Trigger: ACCATTTCTGGAGACAAGGCAATGGGGAAACTGGGT...CCTCTTGAATGTCTTTCCAATGGCTGGAAAGGTCCCTCTGTGGTTATCTGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp AGTACTGAGAAAAACATCCCTTTACTCAAGTGTCAGATGTCAGAGTGCTCTAACCTGGGAGGCGGAGGTTaGAGTGAGCTGAGATCACAT +
Preference number: 4 (lower is better)
Translates to: STEKNIPLLKCQMSECSNLGGGG*SELRSH
Trigger: ATGTGATCTCAGCTCACTGCAACCTCCGCCTCCCAG...GTTAGAGCACTCTGACATCTGACACTTGAGTAAAGGGATGTTTTTCTCAGTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp TCTTTTCCCTCTAGTTCTTTTGGCACAAGTTGTAACCTAATGCGACAAAGGTCCCCTCCACCTGGTGCTTaGTATTGGGTGTATTCAGGC +
Preference number: 4 (lower is better)
Translates to: SFPSSSFGTSCNLMRQRSPPPGA*YWVYSG
Trigger: GCCTGAATACACCCAATAGCAAGCACCAGGTGGAGG...GGACCTTTGTCGCATTAGGTTACAACTTGTGCCAAAAGAACTAGAGGGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp CTGCTTTTAGTATCATCTCACCCGTGGCAGAAGAAAGAGGTTCTTCCCAATTTATGGGTGTGGTTTTGCTaGCCGCCACATGCAATGAAC +
Preference number: 4 (lower is better)
Translates to: LLLVSSHPWQKKEVLPNLWVWFC*PPHAMN
Trigger: GTTCATTGCATGTGGCGGCCAGCAAAACCACACCCA...TAAATTGGGAAGAACCTCTTTCTTCTGCCACGGGTGAGATGATACTAAAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp CTAACAGATAACCACAGAGGGACCTTTCCAGCCATTGGAAAGACATTCAAGAGGACATCTGCCGCCATGTaGGAAGTAATTCCAAACAAG +
Preference number: 4 (lower is better)
Translates to: LTDNHRGTFPAIGKTFKRTSAAM*EVIPNK
Trigger: CTTGTTTGGAATTACTTCTCACATGGCGGCAGATGT...CCTCTTGAATGTCTTTCCAATGGCTGGAAAGGTCCCTCTGTGGTTATCTGTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp TCTTTTCCCTCTAGTTCTTTTGGCACAAGTTGTAACCTAATGCGACAAAGGTCCTTCCCAGTAGATCTTTaGCTGGCACATACCAGCGTC +
Preference number: 4 (lower is better)
Translates to: SFPSSSFGTSCNLMRQRSFPVDL*LAHTSV
Trigger: GACGCTGGTATGTGCCAGTCAAAGATCTACTGGGAA...GGACCTTTGTCGCATTAGGTTACAACTTGTGCCAAAAGAACTAGAGGGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp ATCCTGGGAGTGACCCAGAGATGCTCTCTAGGGATGTACCTCTTGATGTTCTTGTCCCATTCTCCAACATaGAGCTTGTTAGATGGTAAA +
Preference number: 4 (lower is better)
Translates to: ILGVTQRCSLGMYLLMFLSHSPT*SLLDGK
Trigger: TTTACCATCTAACAAGCTTCATGTTGGAGAATGGGA...CAAGAACATCAAGAGGTACATCCCTAGAGAGCATCTCTGGGTCACTCCCAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp CTGCTTTTAGTATCATCTCACCCGTGGCAGAAGAAAGAGGTTCTTCCCAATTTATGCTCACCATGGATGTaGTTCAGCATGAGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: LLLVSSHPWQKKEVLPNLCSPWM*FSMREV
Trigger: CACCTCTCTCATGCTGAATCACATCCATGGTGAGCA...TAAATTGGGAAGAACCTCTTTCTTCTGCCACGGGTGAGATGATACTAAAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp ATCCTGGGAGTGACCCAGAGATGCTCTCTAGGGATGTACCTCTTGATGTTCTTGCTTTCTATTATACTTTaGTTGGCATGGGCCAATCTG +
Preference number: 4 (lower is better)
Translates to: ILGVTQRCSLGMYLLMFLLSIIL*LAWANL
Trigger: CAGATTGGCCCATGCCAATCAAAGTATAATAGAAAG...CAAGAACATCAAGAGGTACATCCCTAGAGAGCATCTCTGGGTCACTCCCAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp ATAACCACAGAGGGACCTTTCCAGCCATTGGAAAGACATTCAAGAGGAAGAGGAGACAAAGGTCCCTCATaGGATGGCTTAAAACTAGCA +
Preference number: 4 (lower is better)
Translates to: ITTEGPFQPLERHSRGRGDKGPS*DGLKLA
Trigger: TGCTAGTTTTAAGCCATCTCATGAGGGACCTTTGTC...TCCTCTTCCTCTTGAATGTCTTTCCAATGGCTGGAAAGGTCCCTCTGTGGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp TCTTTTCCCTCTAGTTCTTTTGGCACAAGTTGTAACCTAATGCGACAAAGGTCCCCTCTTCCAGAAAAATaGGGTCATCCTGGGAGTGAC +
Preference number: 4 (lower is better)
Translates to: SFPSSSFGTSCNLMRQRSPLPEK*GHPGSD
Trigger: GTCACTCCCAGGATGACCTCATTTTTCTGGAAGAGG...GGACCTTTGTCGCATTAGGTTACAACTTGTGCCAAAAGAACTAGAGGGAAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp CTAACAGATAACCACAGAGGGACCTTTCCAGCCATTGGAAAGACATTCAAGAGGTCCATGATTTGCATTTaGCAGTCATGTCACCAAGGG +
Preference number: 4 (lower is better)
Translates to: LTDNHRGTFPAIGKTFKRSMICI*QSCHQG
Trigger: CCCTTGGTGACATGACTGGCAAATGCAAATCATGGA...CCTCTTGAATGTCTTTCCAATGGCTGGAAAGGTCCCTCTGTGGTTATCTGTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp TCTTTTCCCTCTAGTTCTTTTGGCACAAGTTGTAACCTAATGCGACAAAGGTCCAAGTTCAGGGGTACATaGGCAGGAAGTGCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: SFPSSSFGTSCNLMRQRSKFRGT*AGSAGL
Trigger: CAAACCAGCACTTCCTGCGCATGTACCCCTGAACTT...GGACCTTTGTCGCATTAGGTTACAACTTGTGCCAAAAGAACTAGAGGGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp AGTATTGGAGGGCACAGAAGGGTGATAGTCTTGGTTTTTATATTTGTCCTTCACGGAGTGACCCAGAGATaGTCTCTAGGGATGTACCTC +
Preference number: 4 (lower is better)
Translates to: SIGGHRRVIVLVFIFVLHGVTQR*SLGMYL
Trigger: GAGGTACATCCCTAGAGAGCATCTCTGGGTCACTCC...GTGAAGGACAAATATAAAAACCAAGACTATCACCCTTCTGTGCCCTCCAATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp AGTATTGGAGGGCACAGAAGGGTGATAGTCTTGGTTTTTATATTTGTCCTTCACCGGATGTGTAACAAATaGCCCAGCCTGCTGGCATTC +
Preference number: 4 (lower is better)
Translates to: SIGGHRRVIVLVFIFVLHRMCNK*PSLLAF
Trigger: GAATGCCAGCAGGCTGGGCCATTTGTTACACATCCG...GTGAAGGACAAATATAAAAACCAAGACTATCACCCTTCTGTGCCCTCCAATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp AGTACTGAGAAAAACATCCCTTTACTCAAGTGTCAGATGTCAGAGTGCTCTAACCCAGCTTTGGCCGTTTaGTGGGAAGTAGCCATACAC +
Preference number: 4 (lower is better)
Translates to: STEKNIPLLKCQMSECSNPALAV*WEVAIH
Trigger: GTGTATGGCTACTTCCCACCAAACGGCCAAAGCTGG...GTTAGAGCACTCTGACATCTGACACTTGAGTAAAGGGATGTTTTTCTCAGTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp TCTTTTCCCTCTAGTTCTTTTGGCACAAGTTGTAACCTAATGCGACAAAGGTCCTCAGTACGTGGCCACTaGAAAGGGAAGTACCCAGTT +
Preference number: 4 (lower is better)
Translates to: SFPSSSFGTSCNLMRQRSSVRGH*KGKYPV
Trigger: AACTGGGTACTTCCCTTTCCAGTGGCCACGTACTGA...GGACCTTTGTCGCATTAGGTTACAACTTGTGCCAAAAGAACTAGAGGGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp TCTTTTCCCTCTAGTTCTTTTGGCACAAGTTGTAACCTAATGCGACAAAGGTCCCCTTACAGTAGCGTGTaGCTCAGGCCACATCTTTTC +
Preference number: 4 (lower is better)
Translates to: SFPSSSFGTSCNLMRQRSPYSSV*LRPHLF
Trigger: GAAAAGATGTGGCCTGAGCCACACGCTACTGTAAGG...GGACCTTTGTCGCATTAGGTTACAACTTGTGCCAAAAGAACTAGAGGGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp AGTATTGGAGGGCACAGAAGGGTGATAGTCTTGGTTTTTATATTTGTCCTTCACTCCACAGTGACACCGTaGAGGGAATATCCAAACCAG +
Preference number: 4 (lower is better)
Translates to: SIGGHRRVIVLVFIFVLHSTVTP*REYPNQ
Trigger: CTGGTTTGGATATTCCCTTCACGGTGTCACTGTGGA...GTGAAGGACAAATATAAAAACCAAGACTATCACCCTTCTGTGCCCTCCAATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp CCAACTCTACAAAAGTATTGGAGGGCACAGAAGGGTGATAGTCTTGGTTTTTATTCCTTCCAGCAGCAATaGCGACTTGGTTCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: PTLQKYWRAQKGDSLGFYSFQQQ*RLGSLP
Trigger: AGGCAAAGAACCAAGTCGTCATTGCTGCTGGAAGGA...ATAAAAACCAAGACTATCACCCTTCTGTGCCCTCCAATACTTTTGTAGAGTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp TCTTTTCCCTCTAGTTCTTTTGGCACAAGTTGTAACCTAATGCGACAAAGGTCCGTTGTACAGCAGGTCTaGCTACAGGCAATAAGTTGG +
Preference number: 4 (lower is better)
Translates to: SFPSSSFGTSCNLMRQRSVVQQV*LQAISW
Trigger: CCAACTTATTGCCTGTAGTCAGACCTGCTGTACAAC...GGACCTTTGTCGCATTAGGTTACAACTTGTGCCAAAAGAACTAGAGGGAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp CAAACTAACACACGACCAGGAACAGAAAACCAAATACCAAGTATAGCATGTTCTGGTTCTCAGGCAGGTTaGAGTCACTGGTCCCATTCT +
Preference number: 4 (lower is better)
Translates to: QTNTRPGTENQIPSIACSGSQAG*SHWSHS
Trigger: AGAATGGGACCAGTGACTGCAACCTGCCTGAGAACC...AGAACATGCTATACTTGGTATTTGGTTTTCTGTTCCTGGTCGTGTGTTAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp AGTACTGAGAAAAACATCCCTTTACTCAAGTGTCAGATGTCAGAGTGCTCTAACGACGACTTGGTTCTTTaGCTTGGACCTCACGGTGAT +
Preference number: 4 (lower is better)
Translates to: STEKNIPLLKCQMSECSNDDLVL*LGPHGD
Trigger: ATCACCGTGAGGTCCAAGGCAAAGAACCAAGTCGTC...GTTAGAGCACTCTGACATCTGACACTTGAGTAAAGGGATGTTTTTCTCAGTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp ATAACCACAGAGGGACCTTTCCAGCCATTGGAAAGACATTCAAGAGGAAGAGGAGAAGAAAGGTTTAGATaGAAAGGGAGCGAGGAAGTA +
Preference number: 4 (lower is better)
Translates to: ITTEGPFQPLERHSRGRGEERFR*KGSEEV
Trigger: TACTTCCTCGCTCCCTTTGCATCTAAACCTTTCTTC...TCCTCTTCCTCTTGAATGTCTTTCCAATGGCTGGAAAGGTCCCTCTGTGGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp AGTATTGGAGGGCACAGAAGGGTGATAGTCTTGGTTTTTATATTTGTCCTTCACCACGGTGAACCTCTATaGCAGAGAGAACCCAACATG +
Preference number: 4 (lower is better)
Translates to: SIGGHRRVIVLVFIFVLHHGEPL*QREPNM
Trigger: CATGTTGGGTTCTCTCTGCCATAGAGGTTCACCGTG...GTGAAGGACAAATATAAAAACCAAGACTATCACCCTTCTGTGCCCTCCAATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp AGTACTGAGAAAAACATCCCTTTACTCAAGTGTCAGATGTCAGAGTGCTCTAACGCAGCAATGACGACTTaGTTCTTTGCCTTGGACCTC +
Preference number: 4 (lower is better)
Translates to: STEKNIPLLKCQMSECSNAAMTT*FFALDL
Trigger: GAGGTCCAAGGCAAAGAACCAAGTCGTCATTGCTGC...GTTAGAGCACTCTGACATCTGACACTTGAGTAAAGGGATGTTTTTCTCAGTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp CTGCTTTTAGTATCATCTCACCCGTGGCAGAAGAAAGAGGTTCTTCCCAATTTAGATTTCCAGAGGGTGTaGCTGTTAGTGTGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: LLLVSSHPWQKKEVLPNLDFQRV*LLVCLS
Trigger: AGAGAGACACACTAACAGCCACACCCTCTGGAAATC...TAAATTGGGAAGAACCTCTTTCTTCTGCCACGGGTGAGATGATACTAAAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp CTGCTTTTAGTATCATCTCACCCGTGGCAGAAGAAAGAGGTTCTTCCCAATTTAGTCTTAACCTCCACCTaGTGCTTGCTATTGGGTGTA +
Preference number: 4 (lower is better)
Translates to: LLLVSSHPWQKKEVLPNLVLTST*CLLLGV
Trigger: TACACCCAATAGCAAGCACCAGGTGGAGGTTAAGAC...TAAATTGGGAAGAACCTCTTTCTTCTGCCACGGGTGAGATGATACTAAAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp TCTTTTCCCTCTAGTTCTTTTGGCACAAGTTGTAACCTAATGCGACAAAGGTCCCTAATGGATGGTACATaGAGTAGGGACTGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: SFPSSSFGTSCNLMRQRSLMDGT*SRDCRD
Trigger: GTCTCTGCAGTCCCTACTCCATGTACCATCCATTAG...GGACCTTTGTCGCATTAGGTTACAACTTGTGCCAAAAGAACTAGAGGGAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR CAA 72 bp CAGAGATGCTCTCTAGGGATGTACCTCTTGATGTTCTaGTTAACTTTCCACTCTTCAGCTGGATTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: QRCSLGMYLLMF*LTFHSSAGFLF
Trigger: GAAGAGGAATCCAGCTGAAGAGTGGAAAGTTAACAAGAACATCAAGAGGTACATCCCTAGAGAGCATCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp CAAACTAACACACGACCAGGAACAGAAAACCAAATACCAAGTATAGCATGTTCTAGAAACGGAGTCCAGTaGGTGCTCTCAGACACATCA +
Preference number: 4 (lower is better)
Translates to: QTNTRPGTENQIPSIACSRNGVQ*VLSDTS
Trigger: TGATGTGTCTGAGAGCACTCACTGGACTCCGTTTCT...AGAACATGCTATACTTGGTATTTGGTTTTCTGTTCCTGGTCGTGTGTTAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp CAAACTAACACACGACCAGGAACAGAAAACCAAATACCAAGTATAGCATGTTCTAGCCGAATGAGCCTCTaGATAGGAGCCGTGAAAATC +
Preference number: 4 (lower is better)
Translates to: QTNTRPGTENQIPSIACSSRMSL*IGAVKI
Trigger: GATTTTCACGGCTCCTATTCAGAGGCTCATTCGGCT...AGAACATGCTATACTTGGTATTTGGTTTTCTGTTCCTGGTCGTGTGTTAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp AGTATTGGAGGGCACAGAAGGGTGATAGTCTTGGTTTTTATATTTGTCCTTCACACTCTTGAGAGAAGCTaGGAAGAGAAGGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SIGGHRRVIVLVFIFVLHTLERS*EEKGSS
Trigger: AGAAGAGCCCTTCTCTTCTCAGCTTCTCTCAAGAGT...GTGAAGGACAAATATAAAAACCAAGACTATCACCCTTCTGTGCCCTCCAATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp TCTTTTCCCTCTAGTTCTTTTGGCACAAGTTGTAACCTAATGCGACAAAGGTCCACCAGTCTCTACTCTTaGGAGAAGCTGAGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: SFPSSSFGTSCNLMRQRSTSLYS*EKLRRE
Trigger: TTCTCTTCTCAGCTTCTCTCAAGAGTAGAGACTGGT...GGACCTTTGTCGCATTAGGTTACAACTTGTGCCAAAAGAACTAGAGGGAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp CCAACTCTACAAAAGTATTGGAGGGCACAGAAGGGTGATAGTCTTGGTTTTTATATGCCAGCTGACATCTaGCGCCATGTGAGAAGTAAT +
Preference number: 4 (lower is better)
Translates to: PTLQKYWRAQKGDSLGFYMPADI*RHVRSN
Trigger: ATTACTTCTCACATGGCGGCAGATGTCAGCTGGCAT...ATAAAAACCAAGACTATCACCCTTCTGTGCCCTCCAATACTTTTGTAGAGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp CCAACTCTACAAAAGTATTGGAGGGCACAGAAGGGTGATAGTCTTGGTTTTTATCCGCTCCACTGGATGTaGCACTTTGTCCATCAAAAT +
Preference number: 4 (lower is better)
Translates to: PTLQKYWRAQKGDSLGFYPLHWM*HFVHQN
Trigger: ATTTTGATGGACAAAGTGGCACATCCAGTGGAGCGG...ATAAAAACCAAGACTATCACCCTTCTGTGCCCTCCAATACTTTTGTAGAGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp CTAACAGATAACCACAGAGGGACCTTTCCAGCCATTGGAAAGACATTCAAGAGGAAGTGGGATATAACTTaGAAACAGCTAGCATCTCAC +
Preference number: 4 (lower is better)
Translates to: LTDNHRGTFPAIGKTFKRKWDIT*KQLASH
Trigger: GTGAGATGCTAGCTGTTTCCAAGTTATATCCCACTT...CCTCTTGAATGTCTTTCCAATGGCTGGAAAGGTCCCTCTGTGGTTATCTGTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp ATAACCACAGAGGGACCTTTCCAGCCATTGGAAAGACATTCAAGAGGAAGAGGATCATGTCACCAAGGGTaGTCTCTTTGCCATTATATA +
Preference number: 4 (lower is better)
Translates to: ITTEGPFQPLERHSRGRGSCHQG*SLCHYI
Trigger: TATATAATGGCAAAGAGACCACCCTTGGTGACATGA...TCCTCTTCCTCTTGAATGTCTTTCCAATGGCTGGAAAGGTCCCTCTGTGGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp TCTTTTCCCTCTAGTTCTTTTGGCACAAGTTGTAACCTAATGCGACAAAGGTCCGTATCATCTCACCCGTaGCAGAAGAAAGAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: SFPSSSFGTSCNLMRQRSVSSHP*QKKEVL
Trigger: AAGAACCTCTTTCTTCTGCCACGGGTGAGATGATAC...GGACCTTTGTCGCATTAGGTTACAACTTGTGCCAAAAGAACTAGAGGGAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp CAAACTAACACACGACCAGGAACAGAAAACCAAATACCAAGTATAGCATGTTCTCTGTGGAAGGAGACATaGGTAAGCAGAATGTCTGCT +
Preference number: 4 (lower is better)
Translates to: QTNTRPGTENQIPSIACSLWKET*VSRMSA
Trigger: AGCAGACATTCTGCTTACTCATGTCTCCTTCCACAG...AGAACATGCTATACTTGGTATTTGGTTTTCTGTTCCTGGTCGTGTGTTAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp CTGCTTTTAGTATCATCTCACCCGTGGCAGAAGAAAGAGGTTCTTCCCAATTTATCCCTGCAAAGGGCATaGTCTTGTTCTTTCTTTATG +
Preference number: 4 (lower is better)
Translates to: LLLVSSHPWQKKEVLPNLSLQRA*SCSFFM
Trigger: CATAAAGAAAGAACAAGATCATGCCCTTTGCAGGGA...TAAATTGGGAAGAACCTCTTTCTTCTGCCACGGGTGAGATGATACTAAAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp CTAACAGATAACCACAGAGGGACCTTTCCAGCCATTGGAAAGACATTCAAGAGGGATATAATGAACGCTTaGATTAAGAAACGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: LTDNHRGTFPAIGKTFKRDIMNA*IKKRSP
Trigger: TGGACTCCGTTTCTTAATGCAAGCGTTCATTATATC...CCTCTTGAATGTCTTTCCAATGGCTGGAAAGGTCCCTCTGTGGTTATCTGTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp CTGCTTTTAGTATCATCTCACCCGTGGCAGAAGAAAGAGGTTCTTCCCAATTTAACTCTACAAAAGTATTaGAGGGCACAGAAGGGTGAT +
Preference number: 4 (lower is better)
Translates to: LLLVSSHPWQKKEVLPNLTLQKY*RAQKGD
Trigger: ATCACCCTTCTGTGCCCTCCAATACTTTTGTAGAGT...TAAATTGGGAAGAACCTCTTTCTTCTGCCACGGGTGAGATGATACTAAAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp AGTACTGAGAAAAACATCCCTTTACTCAAGTGTCAGATGTCAGAGTGCTCTAACAGGTCCCTCATGAGATaGCTTAAAACTAGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: STEKNIPLLKCQMSECSNRSLMR*LKTSSV
Trigger: GACACTGCTAGTTTTAAGCCATCTCATGAGGGACCT...GTTAGAGCACTCTGACATCTGACACTTGAGTAAAGGGATGTTTTTCTCAGTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp CAAACTAACACACGACCAGGAACAGAAAACCAAATACCAAGTATAGCATGTTCTCCTGGTGCTTGCTATTaGGTGTATTCAGGCATTGAG +
Preference number: 4 (lower is better)
Translates to: QTNTRPGTENQIPSIACSPGACY*VYSGIE
Trigger: CTCAATGCCTGAATACACCCAATAGCAAGCACCAGG...AGAACATGCTATACTTGGTATTTGGTTTTCTGTTCCTGGTCGTGTGTTAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp AGTACTGAGAAAAACATCCCTTTACTCAAGTGTCAGATGTCAGAGTGCTCTAACTGCTTTTGTGACAACTaGGAGCCACCTATGAACATT +
Preference number: 4 (lower is better)
Translates to: STEKNIPLLKCQMSECSNCFCDN*EPPMNI
Trigger: AATGTTCATAGGTGGCTCTCAGTTGTCACAAAAGCA...GTTAGAGCACTCTGACATCTGACACTTGAGTAAAGGGATGTTTTTCTCAGTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp ATAACCACAGAGGGACCTTTCCAGCCATTGGAAAGACATTCAAGAGGAAGAGGAGAAATCAATACATATTaGGCCTTTTCTTCTGGACAT +
Preference number: 4 (lower is better)
Translates to: ITTEGPFQPLERHSRGRGEINTY*AFSSGH
Trigger: ATGTCCAGAAGAAAAGGCCCAATATGTATTGATTTC...TCCTCTTCCTCTTGAATGTCTTTCCAATGGCTGGAAAGGTCCCTCTGTGGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp CTAACAGATAACCACAGAGGGACCTTTCCAGCCATTGGAAAGACATTCAAGAGGAGAATATGGAGTGTTTaGTTTTCTGTTCCTGCAATA +
Preference number: 4 (lower is better)
Translates to: LTDNHRGTFPAIGKTFKRRIWSV*FSVPAI
Trigger: TATTGCAGGAACAGAAAACCAAACACTCCATATTCT...CCTCTTGAATGTCTTTCCAATGGCTGGAAAGGTCCCTCTGTGGTTATCTGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp ATAACCACAGAGGGACCTTTCCAGCCATTGGAAAGACATTCAAGAGGAAGAGGACTATTATACTTTGATTaGCATGGGCCAATCTGTTAT +
Preference number: 4 (lower is better)
Translates to: ITTEGPFQPLERHSRGRGLLYFD*HGPICY
Trigger: ATAACAGATTGGCCCATGCCAATCAAAGTATAATAG...TCCTCTTCCTCTTGAATGTCTTTCCAATGGCTGGAAAGGTCCCTCTGTGGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp CTGCTTTTAGTATCATCTCACCCGTGGCAGAAGAAAGAGGTTCTTCCCAATTTAATTCTTCAGATAGGTTaGGCTACCAATAATTGTCCC +
Preference number: 4 (lower is better)
Translates to: LLLVSSHPWQKKEVLPNLILQIG*ATNNCP
Trigger: GGGACAATTATTGGTAGCCCAACCTATCTGAAGAAT...TAAATTGGGAAGAACCTCTTTCTTCTGCCACGGGTGAGATGATACTAAAAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp CAAACTAACACACGACCAGGAACAGAAAACCAAATACCAAGTATAGCATGTTCTTTGCTTCCATTTTTGTaGGTCTTAACCTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: QTNTRPGTENQIPSIACSLLPFL*VLTSTW
Trigger: CCAGGTGGAGGTTAAGACCCACAAAAATGGAAGCAA...AGAACATGCTATACTTGGTATTTGGTTTTCTGTTCCTGGTCGTGTGTTAGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp CAAACTAACACACGACCAGGAACAGAAAACCAAATACCAAGTATAGCATGTTCTGCTTCCTTGTGCTTTTaGTGTGCCATAGGTTACTAT +
Preference number: 4 (lower is better)
Translates to: QTNTRPGTENQIPSIACSASLCF*CAIGYY
Trigger: ATAGTAACCTATGGCACAGCAAAAGCACAAGGAAGC...AGAACATGCTATACTTGGTATTTGGTTTTCTGTTCCTGGTCGTGTGTTAGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp CAAACTAACACACGACCAGGAACAGAAAACCAAATACCAAGTATAGCATGTTCTTGTCAGATGTCAGAGTaGTCTAACTGCTCAACTCAT +
Preference number: 4 (lower is better)
Translates to: QTNTRPGTENQIPSIACSCQMSE*SNCSTH
Trigger: ATGAGTTGAGCAGTTAGAGCACTCTGACATCTGACA...AGAACATGCTATACTTGGTATTTGGTTTTCTGTTCCTGGTCGTGTGTTAGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp TGTGTTGTTTCCCTCTATGTGTCCACGTGTTCTCATTTAGCTCCCACTTACAAGTATAAACTTGAAGCTTaGTTCCATTTTTGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: CVVSLYVSTCSHLAPTYKYKLEA*FHFCGS
Trigger: AGACCCACAAAAATGGAAGCAAGCTTCAAGTTTATA...CTTGTAAGTGGGAGCTAAATGAGAACACGTGGACACATAGAGGGAAACAACACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp TGTGTTGTTTCCCTCTATGTGTCCACGTGTTCTCATTTAGCTCCCACTTACAAGCCAAGAAAATACTCTTaGAATTGTTCCACCAAAAAC +
Preference number: 4 (lower is better)
Translates to: CVVSLYVSTCSHLAPTYKPRKYS*NCSTKN
Trigger: GTTTTTGGTGGAACAATTCCAAGAGTATTTTCTTGG...CTTGTAAGTGGGAGCTAAATGAGAACACGTGGACACATAGAGGGAAACAACACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp CCAACTCTACAAAAGTATTGGAGGGCACAGAAGGGTGATAGTCTTGGTTTTTATATGCGCAGGAAGTGCTaGTTTGTTACATACATAAAG +
Preference number: 4 (lower is better)
Translates to: PTLQKYWRAQKGDSLGFYMRRKC*FVTYIK
Trigger: CTTTATGTATGTAACAAACCAGCACTTCCTGCGCAT...ATAAAAACCAAGACTATCACCCTTCTGTGCCCTCCAATACTTTTGTAGAGTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CCA 90 bp AGTATTGGAGGGCACAGAAGGGTGATAGTCTTGGTTTTTATATTTGTCCTTCACCTAAACAAAACCAAATaGCGCTTCCTTGTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: SIGGHRRVIVLVFIFVLHLNKTK*RFLVLL
Trigger: CAAAAGCACAAGGAAGCGCCATTTGGTTTTGTTTAG...GTGAAGGACAAATATAAAAACCAAGACTATCACCCTTCTGTGCCCTCCAATACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp CAAACTAACACACGACCAGGAACAGAAAACCAAATACCAAGTATAGCATGTTCTTGCAGGACTGACAAATaGAATCCATCCTACGAAAAA +
Preference number: 4 (lower is better)
Translates to: QTNTRPGTENQIPSIACSCRTDK*NPSYEK
Trigger: TTTTTCGTAGGATGGATTTCATTTGTCAGTCCTGCA...AGAACATGCTATACTTGGTATTTGGTTTTCTGTTCCTGGTCGTGTGTTAGTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR TCA 90 bp CAAACTAACACACGACCAGGAACAGAAAACCAAATACCAAGTATAGCATGTTCTGGTCTCTTAGGTCTGTaGTACAAAGGCATAAAACAA +
Preference number: 4 (lower is better)
Translates to: QTNTRPGTENQIPSIACSGLLGL*YKGIKQ
Trigger: TTGTTTTATGCCTTTGTATCACAGACCTAAGAGACC...AGAACATGCTATACTTGGTATTTGGTTTTCTGTTCCTGGTCGTGTGTTAGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp CTGCTTTTAGTATCATCTCACCCGTGGCAGAAGAAAGAGGTTCTTCCCAATTTAAGTAAGCAGAATGTCTaGTATTTCACATATTTCTGG +
Preference number: 4 (lower is better)
Translates to: LLLVSSHPWQKKEVLPNLSKQNV*YFTYFW
Trigger: CCAGAAATATGTGAAATAGCAGACATTCTGCTTACT...TAAATTGGGAAGAACCTCTTTCTTCTGCCACGGGTGAGATGATACTAAAAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
3UTR CAA 72 bp TGGTTTGTTACATACATAAAGGTGTGTCATGGGGGTTaGTTACACAGATTATTTCATCACCCTAAGTATCCA +
Preference number: 4 (lower is better)
Translates to: WFVTYIKVCHGG*LHRLFHHPKYP
Trigger: TGGATACTTAGGGTGATGAAATAATCTGTGTAACAAACCCCCATGACACACCTTTATGTATGTAACAAACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR GCA 90 bp CAAACTAACACACGACCAGGAACAGAAAACCAAATACCAAGTATAGCATGTTCTCACATACCAGCGTCGTaGAAGGTAATTAAAATTAAA +
Preference number: 4 (lower is better)
Translates to: QTNTRPGTENQIPSIACSHIPAS*KVIKIK
Trigger: TTTAATTTTAATTACCTTGCACGACGCTGGTATGTG...AGAACATGCTATACTTGGTATTTGGTTTTCTGTTCCTGGTCGTGTGTTAGTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS GCA 90 bp CCCGGCCCAGCTCCGCTGCTACGCTGGGCGCCTGGCGGGCCTCTCTaGGGCGCTGCTGCGCACCGACAGCTTCGTGGGCGGCCGCTGGCT +
Preference number: 5 (lower is better)
Translates to: PGPAPLLRWAPGGPL*GAAAHRQLRGRPLA
Trigger: AGCCAGCGGCCGCCCACGAAGCTGTCGGTGCGCAGCAGCGCCGCAGAGAGGCCCGCCAGGCGCCCAGCGTAGCAGCGGAGCTGGGCCGGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474784.5
CDS CCA 90 bp CGTCGTTGCCCGGGCCATGGCGACCTGCATTTGGCTGCGGAGCTGTaGGGCCCGGCGCCTCGGGTCGACGTTTCCAGGCTGCCGCCTCCG +
Preference number: 5 (lower is better)
Translates to: RRCPGHGDLHLAAEL*GPAPRVDVSRLPPP
Trigger: CGGAGGCGGCAGCCTGGAAACGTCGACCCGAGGCGCCGGGCCCCACAGCTCCGCAGCCAAATGCAGGTCGCCATGGCCCGGGCAACGACG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474784.5
ENST00000475417.1
CDS CCA 90 bp GGCCAGGCCACAACCTGTTTCCTGTCGCCGTCGTTGCCCGGGCCATaGCGACCTGCATTTGGCTGCGGAGCTGTGGGGCCCGGCGCCTCG +
Preference number: 5 (lower is better)
Translates to: GQATTCFLSPSLPGP*RPAFGCGAVGPGAS
Trigger: CGAGGCGCCGGGCCCCACAGCTCCGCAGCCAAATGCAGGTCGCCATGGCCCGGGCAACGACGGCGACAGGAAACAGGTTGTGGCCTGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474784.5
ENST00000475417.1
CDS GCA 90 bp TTCCTGTCGCCGTCGTTGCCCGGGCCATGGCGACCTGCATTTGGCTaGGGAGCTGTGGGGCCCGGCGCCTCGGGTCGACGTTTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: FLSPSLPGPWRPAFG*GAVGPGASGRRFQA
Trigger: AGCCTGGAAACGTCGACCCGAGGCGCCGGGCCCCACAGCTCCGCAGCCAAATGCAGGTCGCCATGGCCCGGGCAACGACGGCGACAGGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474784.5
ENST00000475417.1
CDS GCA 90 bp CACAACCTGTTTCCTGTCGCCGTCGTTGCCCGGGCCATGGCGACCTaGATTTGGCTGCGGAGCTGTGGGGCCCGGCGCCTCGGGTCGACG +
Preference number: 5 (lower is better)
Translates to: HNLFPVAVVARAMAT*IWLRSCGARRLGST
Trigger: CGTCGACCCGAGGCGCCGGGCCCCACAGCTCCGCAGCCAAATGCAGGTCGCCATGGCCCGGGCAACGACGGCGACAGGAAACAGGTTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474784.5
ENST00000475417.1
CDS GCA 90 bp GTACACGCGCCCGATGTGGATGTGGCCGGGGCGGCTGTAGCCTGGTaGGCCCACCACGAGGTCACCGTGCCCATCCTGGTTGAGGTCAGC +
Preference number: 5 (lower is better)
Translates to: VHAPDVDVAGAAVAW*AHHEVTVPILVEVS
Trigger: GCTGACCTCAACCAGGATGGGCACGGTGACCTCGTGGTGGGCGCACCAGGCTACAGCCGCCCCGGCCACATCCACATCGGGCGCGTGTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CCA 90 bp GAGGTACACGCGCCCGATGTGGATGTGGCCGGGGCGGCTGTAGCCTaGTGCGCCCACCACGAGGTCACCGTGCCCATCCTGGTTGAGGTC +
Preference number: 5 (lower is better)
Translates to: EVHAPDVDVAGAAVA*CAHHEVTVPILVEV
Trigger: GACCTCAACCAGGATGGGCACGGTGACCTCGTGGTGGGCGCACCAGGCTACAGCCGCCCCGGCCACATCCACATCGGGCGCGTGTACCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CCA 90 bp CTGTTTCCTGTCGCCGTCGTTGCCCGGGCCATGGCGACCTGCATTTaGCTGCGGAGCTGTGGGGCCCGGCGCCTCGGGTCGACGTTTCCA +
Preference number: 5 (lower is better)
Translates to: LFPVAVVARAMATCI*LRSCGARRLGSTFP
Trigger: TGGAAACGTCGACCCGAGGCGCCGGGCCCCACAGCTCCGCAGCCAAATGCAGGTCGCCATGGCCCGGGCAACGACGGCGACAGGAAACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474784.5
ENST00000475417.1
CDS TCA 90 bp CCAGGTCCAGGTCAACAGGTGGCAGGCCCAGGTCATTGCCGTAGATaGGGTACACGCGCCCGATGTGGATGTGGCCGGGGCGGCTGTAGC +
Preference number: 5 (lower is better)
Translates to: PGPGQQVAGPGHCRR*GTRARCGCGRGGCS
Trigger: GCTACAGCCGCCCCGGCCACATCCACATCGGGCGCGTGTACCTCATCTACGGCAATGACCTGGGCCTGCCACCTGTTGACCTGGACCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS GCA 90 bp CGGGAGAAGCGGCGGTCTCCGCTGAAGGTGCTGAGCAGCAGAGGCTaGGCGTCAGATGTGAGTGCGTACATGCGAGTGGCTCCGCCTTGG +
Preference number: 5 (lower is better)
Translates to: REKRRSPLKVLSSRG*ASDVSAYMRVAPPW
Trigger: CCAAGGCGGAGCCACTCGCATGTACGCACTCACATCTGACGCGCAGCCTCTGCTGCTCAGCACCTTCAGCGGAGACCGCCGCTTCTCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CCA 90 bp GGCTGCGCGTCAGATGTGAGTGCGTACATGCGAGTGGCTCCGCCTTaGTGTAGGGTCACGGTCAGGAATGCCACCTTAGACACGTCATCG +
Preference number: 5 (lower is better)
Translates to: GCASDVSAYMRVAPP*CRVTVRNATLDTSS
Trigger: CGATGACGTGTCTAAGGTGGCATTCCTGACCGTGACCCTACACCAAGGCGGAGCCACTCGCATGTACGCACTCACATCTGACGCGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp CCCTCCTCCCACCTTCCGCCCTCTCATAGGCCCCAGTGTGTGTTGTTTCCCTCTCCAAATGGCGCTTCCTaGTGCTTTTGCTGTGCCATA +
Preference number: 5 (lower is better)
Translates to: PSSHLPPSHRPQCVLFPSPNGAS*CFCCAI
Trigger: TATGGCACAGCAAAAGCACAAGGAAGCGCCATTTGG...AGAGGGAAACAACACACACTGGGGCCTATGAGAGGGCGGAAGGTGGGAGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS TCA 90 bp TTGAAAGGCCACACGGTGAACCTCTATGGCAGAGAGAACCCAACATaGTCAGCAGGCCAGGCCACAACCTGTTTCCTGTCGCCGTCGTTG +
Preference number: 5 (lower is better)
Translates to: LKGHTVNLYGRENPT*SAGQATTCFLSPSL
Trigger: CAACGACGGCGACAGGAAACAGGTTGTGGCCTGGCCTGCTGATCATGTTGGGTTCTCTCTGCCATAGAGGTTCACCGTGTGGCCTTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474784.5
ENST00000475417.1
CDS-3UTR CAA 90 bp CCCTCCTCCCACCTTCCGCCCTCTCATAGGCCCCAGTGTGTGTTGTTTCCCTCTAGCTTGCTTCCATTTTaGTGGGTCTTAACCTCCACC +
Preference number: 5 (lower is better)
Translates to: PSSHLPPSHRPQCVLFPSSLLPF*WVLTST
Trigger: GGTGGAGGTTAAGACCCACAAAAATGGAAGCAAGCT...AGAGGGAAACAACACACACTGGGGCCTATGAGAGGGCGGAAGGTGGGAGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS TCA 90 bp GCATTTTTGAGCCCTGGGTGTGGTTTTGCTGGCCGCCACATGCAATaGACAGAGGGTTCTCAGGCAGGTTGCAGTCACTGGTCCCATTCT +
Preference number: 5 (lower is better)
Translates to: AFLSPGCGFAGRHMQ*TEGSQAGCSHWSHS
Trigger: AGAATGGGACCAGTGACTGCAACCTGCCTGAGAACCCTCTGTTCATTGCATGTGGCGGCCAGCAAAACCACACCCAGGGCTCAAAAATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS TCA 90 bp CAATTCCCTTCTGCTTCCCTCCACCTGGTGCAAAAGGGGAGCCGATaGCCAGATCGGGTTCACTGTCTCCATTCACATCTGCAGCCAAGA +
Preference number: 5 (lower is better)
Translates to: QFPSASLHLVQKGSR*PDRVHCLHSHLQPR
Trigger: TCTTGGCTGCAGATGTGAATGGAGACAGTGAACCCGATCTGGTCATCGGCTCCCCTTTTGCACCAGGTGGAGGGAAGCAGAAGGGAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS TCA 90 bp GGGCTCCCAACCAACAGCAAGGTTCTGTTGTCCACAGTGACACCGTaGAGGGAATATCCAAACCAGGAGAAGTCTTCCTCGCCTCTCACC +
Preference number: 5 (lower is better)
Translates to: GLPTNSKVLLSTVTP*REYPNQEKSSSPLT
Trigger: GGTGAGAGGCGAGGAAGACTTCTCCTGGTTTGGATATTCCCTTCACGGTGTCACTGTGGACAACAGAACCTTGCTGTTGGTTGGGAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS TCA 90 bp TCCAGGTCGGGCTCCCAACCAACAGCAAGGTTCTGTTGTCCACAGTaGCACCGTGAAGGGAATATCCAAACCAGGAGAAGTCTTCCTCGC +
Preference number: 5 (lower is better)
Translates to: SRSGSQPTARFCCPQ*HREGNIQTRRSLPR
Trigger: GCGAGGAAGACTTCTCCTGGTTTGGATATTCCCTTCACGGTGTCACTGTGGACAACAGAACCTTGCTGTTGGTTGGGAGCCCGACCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS GCA 90 bp AGGGGAGCCGATGACCAGATCGGGTTCACTGTCTCCATTCACATCTaGAGCCAAGAGAGTCCAGCCCAAGTTACAGTAGATGTCCTGGCA +
Preference number: 5 (lower is better)
Translates to: RGADDQIGFTVSIHI*SQESPAQVTVDVLA
Trigger: TGCCAGGACATCTACTGTAACTTGGGCTGGACTCTCTTGGCTGCAGATGTGAATGGAGACAGTGAACCCGATCTGGTCATCGGCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CCA 90 bp AATATCCAAACCAGGAGAAGTCTTCCTCGCCTCTCACCGTCCAGTTaGCTGCCTCCACGTTCAGTTTTTCTTTGTCGCTCAGGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: NIQTRRSLPRLSPSS*LPPRSVFLCRSGWG
Trigger: GCCCCAGCCTGAGCGACAAAGAAAAACTGAACGTGGAGGCAGCCAACTGGACGGTGAGAGGCGAGGAAGACTTCTCCTGGTTTGGATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS GCA 90 bp GCCATGATGATTTCATCTAAGCCATCATCATCCAGGTCACTCAAGTaGAGAACGCCACCAAATCGGGAGAAGCGGCGGTCTCCGCTGAAG +
Preference number: 5 (lower is better)
Translates to: AMMISSKPSSSRSLK*RTPPNREKRRSPLK
Trigger: CTTCAGCGGAGACCGCCGCTTCTCCCGATTTGGTGGCGTTCTGCACTTGAGTGACCTGGATGATGATGGCTTAGATGAAATCATCATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp CCTGCTTTCCTCTCCGGCCCTTACAGTAGCGTGTGGCTCAGGCCACATCTTTTCGGACCTTTCCAGCCATaGGAAAGACATTCAAGAGGA +
Preference number: 5 (lower is better)
Translates to: PAFLSGPYSSVWLRPHLFGPFQP*ERHSRG
Trigger: TCCTCTTGAATGTCTTTCCAATGGCTGGAAAGGTCC...GAAAAGATGTGGCCTGAGCCACACGCTACTGTAAGGGCCGGAGAGGAAAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CCA 90 bp TGTCCTATTTCTACGTGTGTTGAAAGGCCACACGGTGAACCTCTATaGCAGAGAGAACCCAACATGATCAGCAGGCCAGGCCACAACCTG +
Preference number: 5 (lower is better)
Translates to: CPISTCVERPHGEPL*QREPNMISRPGHNL
Trigger: CAGGTTGTGGCCTGGCCTGCTGATCATGTTGGGTTCTCTCTGCCATAGAGGTTCACCGTGTGGCCTTTCAACACACGTAGAAATAGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230036.2
ENST00000378243.8
ENST00000474784.5
CDS CCA 90 bp GCTCCAACCAGCAGCACTTGTTTCAGAGTCCCATTCATCAGTACGTaGCCACTGGAAAGGGAAGTACCCAGTTTCCCCATTGCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: APTSSTCFRVPFIST*PLEREVPSFPIALS
Trigger: AGACAAGGCAATGGGGAAACTGGGTACTTCCCTTTCCAGTGGCCACGTACTGATGAATGGGACTCTGAAACAAGTGCTGCTGGTTGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CCA 90 bp ACAGCTATTTCTACGTGTGTTGAAAGGCCACACGGTGAACCTCTATaGCAGAGAGAACCCAACATGATCAGCAGGCCAGGCCACAACCTG +
Preference number: 5 (lower is better)
Translates to: TAISTCVERPHGEPL*QREPNMISRPGHNL
Trigger: CAGGTTGTGGCCTGGCCTGCTGATCATGTTGGGTTCTCTCTGCCATAGAGGTTCACCGTGTGGCCTTTCAACACACGTAGAAATAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475417.1
ENST00000486892.5
CDS-3UTR CAA 90 bp CTAACAGATAACCACAGAGGGACCTTTCCAGCCATTGGAAAGACATTCAAGAGGGCCCTGGGTGTGGTTTaGCTGGCCGCCACATGCAAT +
Preference number: 5 (lower is better)
Translates to: LTDNHRGTFPAIGKTFKRALGVV*LAATCN
Trigger: ATTGCATGTGGCGGCCAGCAAAACCACACCCAGGGC...CCTCTTGAATGTCTTTCCAATGGCTGGAAAGGTCCCTCTGTGGTTATCTGTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CCA 90 bp CCCCATTGCCTTGTCTCCAGAAATGGTAAACCAGCTTTGGCCGTTTaGTGGGAAGTAGCCATACACCCTCCCAAGGCTCTTTTTCTCATC +
Preference number: 5 (lower is better)
Translates to: PHCLVSRNGKPALAV*WEVAIHPPKALFLI
Trigger: GATGAGAAAAAGAGCCTTGGGAGGGTGTATGGCTACTTCCCACCAAACGGCCAAAGCTGGTTTACCATTTCTGGAGACAAGGCAATGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CCA 90 bp CCAGCAGCACTTGTTTCAGAGTCCCATTCATCAGTACGTGGCCACTaGAAAGGGAAGTACCCAGTTTCCCCATTGCCTTGTCTCCAGAAA +
Preference number: 5 (lower is better)
Translates to: PAALVSESHSSVRGH*KGKYPVSPLPCLQK
Trigger: TTTCTGGAGACAAGGCAATGGGGAAACTGGGTACTTCCCTTTCCAGTGGCCACGTACTGATGAATGGGACTCTGAAACAAGTGCTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp ATCCTGGGAGTGACCCAGAGATGCTCTCTAGGGATGTACCTCTTGATGTTCTTGACGTTCAGTTTTTCTTaGTCGCTCAGGCTGGGGCCA +
Preference number: 5 (lower is better)
Translates to: ILGVTQRCSLGMYLLMFLTFSFS*SLRLGP
Trigger: TGGCCCCAGCCTGAGCGACAAAGAAAAACTGAACGT...CAAGAACATCAAGAGGTACATCCCTAGAGAGCATCTCTGGGTCACTCCCAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CCA 90 bp CATTGCCTTGTCTCCAGAAATGGTAAACCAGCTTTGGCCGTTTGGTaGGAAGTAGCCATACACCCTCCCAAGGCTCTTTTTCTCATCTCG +
Preference number: 5 (lower is better)
Translates to: HCLVSRNGKPALAVW*EVAIHPPKALFLIS
Trigger: CGAGATGAGAAAAAGAGCCTTGGGAGGGTGTATGGCTACTTCCCACCAAACGGCCAAAGCTGGTTTACCATTTCTGGAGACAAGGCAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp CTAACAGATAACCACAGAGGGACCTTTCCAGCCATTGGAAAGACATTCAAGAGGGCAGACATGATCTCATaGCCCACCGGCTTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: LTDNHRGTFPAIGKTFKRADMIS*PTGFSG
Trigger: ACCAGAGAAGCCGGTGGGCAATGAGATCATGTCTGC...CCTCTTGAATGTCTTTCCAATGGCTGGAAAGGTCCCTCTGTGGTTATCTGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp CTGCTTTTAGTATCATCTCACCCGTGGCAGAAGAAAGAGGTTCTTCCCAATTTAGGTCAGCTGAGGTCATaGCCCAGCCAAGCCTCGCAT +
Preference number: 5 (lower is better)
Translates to: LLLVSSHPWQKKEVLPNLGQLRS*PSQASH
Trigger: ATGCGAGGCTTGGCTGGGCAATGACCTCAGCTGACC...TAAATTGGGAAGAACCTCTTTCTTCTGCCACGGGTGAGATGATACTAAAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp TGTGTTGTTTCCCTCTATGTGTCCACGTGTTCTCATTTAGCTCCCACTTACAAGCCGTGCCCATCCTGGTaGAGGTCAGCTGAGGTCATT +
Preference number: 5 (lower is better)
Translates to: CVVSLYVSTCSHLAPTYKPCPSW*RSAEVI
Trigger: AATGACCTCAGCTGACCTCAACCAGGATGGGCACGG...CTTGTAAGTGGGAGCTAAATGAGAACACGTGGACACATAGAGGGAAACAACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp CTAACAGATAACCACAGAGGGACCTTTCCAGCCATTGGAAAGACATTCAAGAGGGGGAGCTCCCAAACCTaGAGCTGGCTTCAGGAGAAA +
Preference number: 5 (lower is better)
Translates to: LTDNHRGTFPAIGKTFKRGSSQT*SWLQEK
Trigger: TTTCTCCTGAAGCCAGCTCAAGGTTTGGGAGCTCCC...CCTCTTGAATGTCTTTCCAATGGCTGGAAAGGTCCCTCTGTGGTTATCTGTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp CTGCTTTTAGTATCATCTCACCCGTGGCAGAAGAAAGAGGTTCTTCCCAATTTACACACTGGGGTCTACTaGAGTGGGGAAGGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: LLLVSSHPWQKKEVLPNLHTGVY*SGEGGR
Trigger: CCTCCCACCTTCCCCACTCAAGTAGACCCCAGTGTG...TAAATTGGGAAGAACCTCTTTCTTCTGCCACGGGTGAGATGATACTAAAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS TCA 90 bp CCTTGTTCAAGGCCCAGACTATGCCAGCTGACATCTGCCGCCATGTaGGAAGTAATTCCAAACAAGAAAGCTACCAGTTTCTCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: PCSRPRLCQLTSAAM*EVIPNKKATSFSVS
Trigger: GGACACAGAGAAACTGGTAGCTTTCTTGTTTGGAATTACTTCTCACATGGCGGCAGATGTCAGCTGGCATAGTCTGGGCCTTGAACAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230036.2
ENST00000378243.8
ENST00000474784.5
ENST00000475417.1
ENST00000486892.5
CDS TCA 90 bp CTGGCTCAACACATCTCCTCCAAAATCACCAGCCGAATGAGCCTCTaGATAGGAGCCGTGAAAATCAATAGCTCCCATGGTCCTAAGGAA +
Preference number: 5 (lower is better)
Translates to: LAQHISSKITSRMSL*IGAVKINSSHGPKE
Trigger: TTCCTTAGGACCATGGGAGCTATTGATTTTCACGGCTCCTATTCAGAGGCTCATTCGGCTGGTGATTTTGGAGGAGATGTGTTGAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230036.2
ENST00000474784.5
CDS-3UTR CAA 90 bp TCTTTTCCCTCTAGTTCTTTTGGCACAAGTTGTAACCTAATGCGACAAAGGTCCGGGTTCTCAGGCAGGTaGCAGTCACTGGTCCCATTC +
Preference number: 5 (lower is better)
Translates to: SFPSSSFGTSCNLMRQRSGFSGR*QSLVPF
Trigger: GAATGGGACCAGTGACTGCAACCTGCCTGAGAACCC...GGACCTTTGTCGCATTAGGTTACAACTTGTGCCAAAAGAACTAGAGGGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp TCTTTTCCCTCTAGTTCTTTTGGCACAAGTTGTAACCTAATGCGACAAAGGTCCATCCTGTGGGCCTCCTaGTCCAGGTCCAGGTCAACA +
Preference number: 5 (lower is better)
Translates to: SFPSSSFGTSCNLMRQRSILWAS*SRSRST
Trigger: TGTTGACCTGGACCTGGACAAGGAGGCCCACAGGAT...GGACCTTTGTCGCATTAGGTTACAACTTGTGCCAAAAGAACTAGAGGGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp AGTACTGAGAAAAACATCCCTTTACTCAAGTGTCAGATGTCAGAGTGCTCTAACCCTCTCACCGTCCAGTaGGCTGCCTCCACGTTCAGT +
Preference number: 5 (lower is better)
Translates to: STEKNIPLLKCQMSECSNPLTVQ*AASTFS
Trigger: ACTGAACGTGGAGGCAGCCAACTGGACGGTGAGAGG...GTTAGAGCACTCTGACATCTGACACTTGAGTAAAGGGATGTTTTTCTCAGTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp CTAACAGATAACCACAGAGGGACCTTTCCAGCCATTGGAAAGACATTCAAGAGGACCAGCTTTGGCCGTTaGGTGGGAAGTAGCCATACA +
Preference number: 5 (lower is better)
Translates to: LTDNHRGTFPAIGKTFKRTSFGR*VGSSHT
Trigger: TGTATGGCTACTTCCCACCAAACGGCCAAAGCTGGT...CCTCTTGAATGTCTTTCCAATGGCTGGAAAGGTCCCTCTGTGGTTATCTGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp ATCCTGGGAGTGACCCAGAGATGCTCTCTAGGGATGTACCTCTTGATGTTCTTGAATGGTAAACCAGCTTaGGCCGTTTGGTGGGAAGTA +
Preference number: 5 (lower is better)
Translates to: ILGVTQRCSLGMYLLMFLNGKPA*AVWWEV
Trigger: TACTTCCCACCAAACGGCCAAAGCTGGTTTACCATT...CAAGAACATCAAGAGGTACATCCCTAGAGAGCATCTCTGGGTCACTCCCAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp ATCCTGGGAGTGACCCAGAGATGCTCTCTAGGGATGTACCTCTTGATGTTCTTGGGAAGAGGAAATAGGTaGTACAGCAGGTCTGACTAC +
Preference number: 5 (lower is better)
Translates to: ILGVTQRCSLGMYLLMFLGRGNR*YSRSDY
Trigger: GTAGTCAGACCTGCTGTACAACCTATTTCCTCTTCC...CAAGAACATCAAGAGGTACATCCCTAGAGAGCATCTCTGGGTCACTCCCAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp ATAACCACAGAGGGACCTTTCCAGCCATTGGAAAGACATTCAAGAGGAAGAGGAAGGCCCCAGTGTGTGTaGTTTCCCTCTATGTGTCCA +
Preference number: 5 (lower is better)
Translates to: ITTEGPFQPLERHSRGRGRPQCV*FPSMCP
Trigger: TGGACACATAGAGGGAAACAACACACACTGGGGCCT...TCCTCTTCCTCTTGAATGTCTTTCCAATGGCTGGAAAGGTCCCTCTGTGGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp CCTGCTTTCCTCTCCGGCCCTTACAGTAGCGTGTGGCTCAGGCCACATCTTTTCTACCTCTTGATGTTCTaGTTAACTTTCCACTCTTCA +
Preference number: 5 (lower is better)
Translates to: PAFLSGPYSSVWLRPHLFYLLMF*LTFHSS
Trigger: TGAAGAGTGGAAAGTTAACAAGAACATCAAGAGGTA...GAAAAGATGTGGCCTGAGCCACACGCTACTGTAAGGGCCGGAGAGGAAAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS GCA 90 bp CTTCTCCCAGGGAAGGGGATAGTTCTCTCGGATATAATGAACGCTTaGATTAAGAAACGGAGTCCAGTGAGTGCTCTCAGACACATCATG +
Preference number: 5 (lower is better)
Translates to: LLPGKGIVLSDIMNA*IKKRSPVSALRHIM
Trigger: CATGATGTGTCTGAGAGCACTCACTGGACTCCGTTTCTTAATGCAAGCGTTCATTATATCCGAGAGAACTATCCCCTTCCCTGGGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230036.2
ENST00000378243.8
ENST00000474784.5
ENST00000475417.1
ENST00000486892.5
CDS-3UTR CAA 90 bp ATAACCACAGAGGGACCTTTCCAGCCATTGGAAAGACATTCAAGAGGAAGAGGAGCAGAGACCCTAGTTTaGTCCCCACTCCATCTTCAA +
Preference number: 5 (lower is better)
Translates to: ITTEGPFQPLERHSRGRGAETLV*SPLHLQ
Trigger: TTGAAGATGGAGTGGGGACAAAACTAGGGTCTCTGC...TCCTCTTCCTCTTGAATGTCTTTCCAATGGCTGGAAAGGTCCCTCTGTGGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS GCA 90 bp CCTAAGGAATCCTTGTTCAAGGCCCAGACTATGCCAGCTGACATCTaGCGCCATGTGAGAAGTAATTCCAAACAAGAAAGCTACCAGTTT +
Preference number: 5 (lower is better)
Translates to: PKESLFKAQTMPADI*RHVRSNSKQESYQF
Trigger: AAACTGGTAGCTTTCTTGTTTGGAATTACTTCTCACATGGCGGCAGATGTCAGCTGGCATAGTCTGGGCCTTGAACAAGGATTCCTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230036.2
ENST00000378243.8
ENST00000474784.5
ENST00000475417.1
ENST00000486892.5
CDS GCA 90 bp TCCATGATTTGCATTTGCCAGTCATGTCACCAAGGGTGGTCTCTTTaGCATTATATACATATACTCGGCCGTCTTCTCCCCCAATCAGTC +
Preference number: 5 (lower is better)
Translates to: SMICICQSCHQGWSL*HYIHILGRLLPQSV
Trigger: GACTGATTGGGGGAGAAGACGGCCGAGTATATGTATATAATGGCAAAGAGACCACCCTTGGTGACATGACTGGCAAATGCAAATCATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CCA 90 bp AAGAAAACCGATGAAGTACAAGTAAGGTTTCCCCACTCCTGTGTGTaGTCATGGGAAGCCATTAGAGGGAAGCATGGATGTGATTCAGCA +
Preference number: 5 (lower is better)
Translates to: KKTDEVQVRFPHSCV*SWEAIRGKHGCDSA
Trigger: TGCTGAATCACATCCATGCTTCCCTCTAATGGCTTCCCATGACCACACACAGGAGTGGGGAAACCTTACTTGTACTTCATCGGTTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492917.2
CDS CCA 90 bp ATGGAGTTATCCATGATTTGCATTTGCCAGTCATGTCACCAAGGGTaGTCTCTTTGCCATTATATACATATACTCGGCCGTCTTCTCCCC +
Preference number: 5 (lower is better)
Translates to: MELSMICICQSCHQG*SLCHYIHILGRLLP
Trigger: GGGGAGAAGACGGCCGAGTATATGTATATAATGGCAAAGAGACCACCCTTGGTGACATGACTGGCAAATGCAAATCATGGATAACTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp TCTTTTCCCTCTAGTTCTTTTGGCACAAGTTGTAACCTAATGCGACAAAGGTCCGGTCCTAAGGAATCCTaGTTCAAGGCCCAGACTATG +
Preference number: 5 (lower is better)
Translates to: SFPSSSFGTSCNLMRQRSGPKES*FKAQTM
Trigger: CATAGTCTGGGCCTTGAACAAGGATTCCTTAGGACC...GGACCTTTGTCGCATTAGGTTACAACTTGTGCCAAAAGAACTAGAGGGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp TGTGTTGTTTCCCTCTATGTGTCCACGTGTTCTCATTTAGCTCCCACTTACAAGTCCAACCAGCAGCACTaGTTTCAGAGTCCCATTCAT +
Preference number: 5 (lower is better)
Translates to: CVVSLYVSTCSHLAPTYKSNQQH*FQSPIH
Trigger: ATGAATGGGACTCTGAAACAAGTGCTGCTGGTTGGA...CTTGTAAGTGGGAGCTAAATGAGAACACGTGGACACATAGAGGGAAACAACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp AGTACTGAGAAAAACATCCCTTTACTCAAGTGTCAGATGTCAGAGTGCTCTAACACCTCCACCTGGTGCTaGCTATTGGGTGTATTCAGG +
Preference number: 5 (lower is better)
Translates to: STEKNIPLLKCQMSECSNTSTWC*LLGVFR
Trigger: CCTGAATACACCCAATAGCAAGCACCAGGTGGAGGT...GTTAGAGCACTCTGACATCTGACACTTGAGTAAAGGGATGTTTTTCTCAGTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp CTAACAGATAACCACAGAGGGACCTTTCCAGCCATTGGAAAGACATTCAAGAGGGGAGTTATCCATGATTaGCATTTGCCAGTCATGTCA +
Preference number: 5 (lower is better)
Translates to: LTDNHRGTFPAIGKTFKRGVIHD*HLPVMS
Trigger: TGACATGACTGGCAAATGCAAATCATGGATAACTCC...CCTCTTGAATGTCTTTCCAATGGCTGGAAAGGTCCCTCTGTGGTTATCTGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp CAAACTAACACACGACCAGGAACAGAAAACCAAATACCAAGTATAGCATGTTCTACTTGGTTCTTTGCCTaGGACCTCACGGTGATGAGG +
Preference number: 5 (lower is better)
Translates to: QTNTRPGTENQIPSIACSTWFFA*DLTVMR
Trigger: CCTCATCACCGTGAGGTCCAAGGCAAAGAACCAAGT...AGAACATGCTATACTTGGTATTTGGTTTTCTGTTCCTGGTCGTGTGTTAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp AGTACTGAGAAAAACATCCCTTTACTCAAGTGTCAGATGTCAGAGTGCTCTAACAGCAGCAATGACGACTaGGTTCTTTGCCTTGGACCT +
Preference number: 5 (lower is better)
Translates to: STEKNIPLLKCQMSECSNSSNDD*VLCLGP
Trigger: AGGTCCAAGGCAAAGAACCAAGTCGTCATTGCTGCT...GTTAGAGCACTCTGACATCTGACACTTGAGTAAAGGGATGTTTTTCTCAGTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp CTGCTTTTAGTATCATCTCACCCGTGGCAGAAGAAAGAGGTTCTTCCCAATTTACGCTTCCTTGTGCTTTaGCTGTGCCATAGGTTACTA +
Preference number: 5 (lower is better)
Translates to: LLLVSSHPWQKKEVLPNLRFLVL*LCHRLL
Trigger: TAGTAACCTATGGCACAGCAAAAGCACAAGGAAGCG...TAAATTGGGAAGAACCTCTTTCTTCTGCCACGGGTGAGATGATACTAAAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS TCA 90 bp AATCAATACATATTGGGCCTTTTCTTCTGGACATGGAGTTATCCATaGTTTGCATTTGCCAGTCATGTCACCAAGGGTGGTCTCTTTGCC +
Preference number: 5 (lower is better)
Translates to: NQYILGLFFWTWSYP*FAFASHVTKGGLFA
Trigger: GGCAAAGAGACCACCCTTGGTGACATGACTGGCAAATGCAAATCATGGATAACTCCATGTCCAGAAGAAAAGGCCCAATATGTATTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp AGTATTGGAGGGCACAGAAGGGTGATAGTCTTGGTTTTTATATTTGTCCTTCACCTATTTCTACGTGTGTaGAAAGGCCACACGGTGAAC +
Preference number: 5 (lower is better)
Translates to: SIGGHRRVIVLVFIFVLHLFLRV*KGHTVN
Trigger: GTTCACCGTGTGGCCTTTCAACACACGTAGAAATAG...GTGAAGGACAAATATAAAAACCAAGACTATCACCCTTCTGTGCCCTCCAATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp AGTACTGAGAAAAACATCCCTTTACTCAAGTGTCAGATGTCAGAGTGCTCTAACATTCCCAGTAGATCTTaGACTGGCACATACCAGCGT +
Preference number: 5 (lower is better)
Translates to: STEKNIPLLKCQMSECSNIPSRS*TGTYQR
Trigger: ACGCTGGTATGTGCCAGTCAAAGATCTACTGGGAAT...GTTAGAGCACTCTGACATCTGACACTTGAGTAAAGGGATGTTTTTCTCAGTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp CCAACTCTACAAAAGTATTGGAGGGCACAGAAGGGTGATAGTCTTGGTTTTTATACTGGATGTGCCACTTaGTCCATCAAAATGCTCACC +
Preference number: 5 (lower is better)
Translates to: PTLQKYWRAQKGDSLGFYTGCAT*SIKMLT
Trigger: GGTGAGCATTTTGATGGACAAAGTGGCACATCCAGT...ATAAAAACCAAGACTATCACCCTTCTGTGCCCTCCAATACTTTTGTAGAGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS GCA 90 bp ATTGGGCCTTTTCTTCTGGACATGGAGTTATCCATGATTTGCATTTaGCAGTCATGTCACCAAGGGTGGTCTCTTTGCCATTATATACAT +
Preference number: 5 (lower is better)
Translates to: IGPFLLDMELSMICI*QSCHQGWSLCHYIH
Trigger: ATGTATATAATGGCAAAGAGACCACCCTTGGTGACATGACTGGCAAATGCAAATCATGGATAACTCCATGTCCAGAAGAAAAGGCCCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS GCA 90 bp ATACATATTGGGCCTTTTCTTCTGGACATGGAGTTATCCATGATTTaGATTTGCCAGTCATGTCACCAAGGGTGGTCTCTTTGCCATTAT +
Preference number: 5 (lower is better)
Translates to: IHIGPFLLDMELSMI*ICQSCHQGWSLCHY
Trigger: ATAATGGCAAAGAGACCACCCTTGGTGACATGACTGGCAAATGCAAATCATGGATAACTCCATGTCCAGAAGAAAAGGCCCAATATGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp TCTTTTCCCTCTAGTTCTTTTGGCACAAGTTGTAACCTAATGCGACAAAGGTCCCATTTTTCTGCATTTTaGAGCCCTGGGTGTGGTTTT +
Preference number: 5 (lower is better)
Translates to: SFPSSSFGTSCNLMRQRSHFSAF*SPGCGF
Trigger: AAAACCACACCCAGGGCTCAAAAATGCAGAAAAATG...GGACCTTTGTCGCATTAGGTTACAACTTGTGCCAAAAGAACTAGAGGGAAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp CAAACTAACACACGACCAGGAACAGAAAACCAAATACCAAGTATAGCATGTTCTCACCAGTCTCTACTCTaGAGAGAAGCTGAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: QTNTRPGTENQIPSIACSHQSLL*REAEKR
Trigger: TCTCTTCTCAGCTTCTCTCAAGAGTAGAGACTGGTG...AGAACATGCTATACTTGGTATTTGGTTTTCTGTTCCTGGTCGTGTGTTAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp ATAACCACAGAGGGACCTTTCCAGCCATTGGAAAGACATTCAAGAGGAAGAGGATCCTATCTTGAAGCCTaGAGAAAAGCTGTTACATAT +
Preference number: 5 (lower is better)
Translates to: ITTEGPFQPLERHSRGRGSYLEA*RKAVTY
Trigger: ATATGTAACAGCTTTTCTCAAGGCTTCAAGATAGGA...TCCTCTTCCTCTTGAATGTCTTTCCAATGGCTGGAAAGGTCCCTCTGTGGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp CAAACTAACACACGACCAGGAACAGAAAACCAAATACCAAGTATAGCATGTTCTAGTTTCCCCATTGCCTaGTCTCCAGAAATGGTAAAC +
Preference number: 5 (lower is better)
Translates to: QTNTRPGTENQIPSIACSSFPIA*SPEMVN
Trigger: GTTTACCATTTCTGGAGACAAGGCAATGGGGAAACT...AGAACATGCTATACTTGGTATTTGGTTTTCTGTTCCTGGTCGTGTGTTAGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp CTGCTTTTAGTATCATCTCACCCGTGGCAGAAGAAAGAGGTTCTTCCCAATTTACCAAGGGTGGTCTCTTaGCCATTATATACATATACT +
Preference number: 5 (lower is better)
Translates to: LLLVSSHPWQKKEVLPNLPRVVS*PLYTYT
Trigger: AGTATATGTATATAATGGCAAAGAGACCACCCTTGG...TAAATTGGGAAGAACCTCTTTCTTCTGCCACGGGTGAGATGATACTAAAAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp CTGCTTTTAGTATCATCTCACCCGTGGCAGAAGAAAGAGGTTCTTCCCAATTTAGTGTGTCATGGGGGTTaGTTACACAGATTATTTCAT +
Preference number: 5 (lower is better)
Translates to: LLLVSSHPWQKKEVLPNLVCHGG*LHRLFH
Trigger: ATGAAATAATCTGTGTAACAAACCCCCATGACACAC...TAAATTGGGAAGAACCTCTTTCTTCTGCCACGGGTGAGATGATACTAAAAGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp CAAACTAACACACGACCAGGAACAGAAAACCAAATACCAAGTATAGCATGTTCTAGAAGACATTCCTCCTaGTTTGGAACCAAAGTAGAC +
Preference number: 5 (lower is better)
Translates to: QTNTRPGTENQIPSIACSRRHSS*FGTKVD
Trigger: GTCTACTTTGGTTCCAAACAAGGAGGAATGTCTTCT...AGAACATGCTATACTTGGTATTTGGTTTTCTGTTCCTGGTCGTGTGTTAGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp CCAACTCTACAAAAGTATTGGAGGGCACAGAAGGGTGATAGTCTTGGTTTTTATGCTTTCTATTATACTTaGATTGGCATGGGCCAATCT +
Preference number: 5 (lower is better)
Translates to: PTLQKYWRAQKGDSLGFYAFYYT*IGMGQS
Trigger: AGATTGGCCCATGCCAATCAAAGTATAATAGAAAGC...ATAAAAACCAAGACTATCACCCTTCTGTGCCCTCCAATACTTTTGTAGAGTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp AGTATTGGAGGGCACAGAAGGGTGATAGTCTTGGTTTTTATATTTGTCCTTCACCTAGGGATGTACCTCTaGATGTTCTTGTTAACTTTC +
Preference number: 5 (lower is better)
Translates to: SIGGHRRVIVLVFIFVLHLGMYL*MFLLTF
Trigger: GAAAGTTAACAAGAACATCAAGAGGTACATCCCTAG...GTGAAGGACAAATATAAAAACCAAGACTATCACCCTTCTGTGCCCTCCAATACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp CAAACTAACACACGACCAGGAACAGAAAACCAAATACCAAGTATAGCATGTTCTTACGTGCCATATCAGTaGACCTTTTACAGTAGGAGT +
Preference number: 5 (lower is better)
Translates to: QTNTRPGTENQIPSIACSYVPYQ*TFYSRS
Trigger: ACTCCTACTGTAAAAGGTCAACTGATATGGCACGTA...AGAACATGCTATACTTGGTATTTGGTTTTCTGTTCCTGGTCGTGTGTTAGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp CAAACTAACACACGACCAGGAACAGAAAACCAAATACCAAGTATAGCATGTTCTGAGAATATGGAGTGTTaGGTTTTCTGTTCCTGCAAT +
Preference number: 5 (lower is better)
Translates to: QTNTRPGTENQIPSIACSENMEC*VFCSCN
Trigger: ATTGCAGGAACAGAAAACCAAACACTCCATATTCTC...AGAACATGCTATACTTGGTATTTGGTTTTCTGTTCCTGGTCGTGTGTTAGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS-3UTR CAA 90 bp CAAACTAACACACGACCAGGAACAGAAAACCAAATACCAAGTATAGCATGTTCTAGAAATCAATACATATaGGGCCTTTTCTTCTGGACA +
Preference number: 5 (lower is better)
Translates to: QTNTRPGTENQIPSIACSRNQYI*GLFFWT
Trigger: TGTCCAGAAGAAAAGGCCCAATATGTATTGATTTCT...AGAACATGCTATACTTGGTATTTGGTTTTCTGTTCCTGGTCGTGTGTTAGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS GCA 72 bp GCTACGCTGGGCGCCTGGCGGGCCTCTCTGCGGCGCTaGTGCGCACCGACAGCTTCGTGGGCGGCCGCTGGC +
Preference number: 6 (lower is better)
Translates to: ATLGAWRASLRR*CAPTASWAAAG
Trigger: GCCAGCGGCCGCCCACGAAGCTGTCGGTGCGCAGCAGCGCCGCAGAGAGGCCCGCCAGGCGCCCAGCGTAGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474784.5
CDS GCA 72 bp GCTCCGCTGCTACGCTGGGCGCCTGGCGGGCCTCTCTaGGGCGCTGCTGCGCACCGACAGCTTCGTGGGCGG +
Preference number: 6 (lower is better)
Translates to: APLLRWAPGGPL*GAAAHRQLRGR
Trigger: CCGCCCACGAAGCTGTCGGTGCGCAGCAGCGCCGCAGAGAGGCCCGCCAGGCGCCCAGCGTAGCAGCGGAGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474784.5
ENST00000475417.1
CDS CCA 72 bp GTCGCCGTCGTTGCCCGGGCCATGGCGACCTGCATTTaGCTGCGGAGCTGTGGGGCCCGGCGCCTCGGGTCG +
Preference number: 6 (lower is better)
Translates to: VAVVARAMATCI*LRSCGARRLGS
Trigger: CGACCCGAGGCGCCGGGCCCCACAGCTCCGCAGCCAAATGCAGGTCGCCATGGCCCGGGCAACGACGGCGAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474784.5
ENST00000475417.1
CDS GCA 72 bp CCGTCGTTGCCCGGGCCATGGCGACCTGCATTTGGCTaGGGAGCTGTGGGGCCCGGCGCCTCGGGTCGACGT +
Preference number: 6 (lower is better)
Translates to: PSLPGPWRPAFG*GAVGPGASGRR
Trigger: ACGTCGACCCGAGGCGCCGGGCCCCACAGCTCCGCAGCCAAATGCAGGTCGCCATGGCCCGGGCAACGACGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474784.5
ENST00000475417.1
CDS CAA 72 bp TGTCGCCGTCGTTGCCCGGGCCATGGCGACCTGCATTaGGCTGCGGAGCTGTGGGGCCCGGCGCCTCGGGTC +
Preference number: 6 (lower is better)
Translates to: CRRRCPGHGDLH*AAELWGPAPRV
Trigger: GACCCGAGGCGCCGGGCCCCACAGCTCCGCAGCCAAATGCAGGTCGCCATGGCCCGGGCAACGACGGCGACA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474784.5
ENST00000475417.1
CDS CCA 72 bp GCGCCCGATGTGGATGTGGCCGGGGCGGCTGTAGCCTaGTGCGCCCACCACGAGGTCACCGTGCCCATCCTG +
Preference number: 6 (lower is better)
Translates to: APDVDVAGAAVA*CAHHEVTVPIL
Trigger: CAGGATGGGCACGGTGACCTCGTGGTGGGCGCACCAGGCTACAGCCGCCCCGGCCACATCCACATCGGGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CCA 72 bp CCGGGCCATGGCGACCTGCATTTGGCTGCGGAGCTGTaGGGCCCGGCGCCTCGGGTCGACGTTTCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: PGHGDLHLAAEL*GPAPRVDVSRL
Trigger: CAGCCTGGAAACGTCGACCCGAGGCGCCGGGCCCCACAGCTCCGCAGCCAAATGCAGGTCGCCATGGCCCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474784.5
ENST00000475417.1
CDS GCA 72 bp TTTCCTGTCGCCGTCGTTGCCCGGGCCATGGCGACCTaGATTTGGCTGCGGAGCTGTGGGGCCCGGCGCCTC +
Preference number: 6 (lower is better)
Translates to: FPVAVVARAMAT*IWLRSCGARRL
Trigger: GAGGCGCCGGGCCCCACAGCTCCGCAGCCAAATGCAGGTCGCCATGGCCCGGGCAACGACGGCGACAGGAAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474784.5
ENST00000475417.1
CDS CAA 90 bp CCTGTTTCCTGTCGCCGTCGTTGCCCGGGCCATGGCGACCTGCATTaGGCTGCGGAGCTGTGGGGCCCGGCGCCTCGGGTCGACGTTTCC +
Preference number: 6 (lower is better)
Translates to: PVSCRRRCPGHGDLH*AAELWGPAPRVDVS
Trigger: GGAAACGTCGACCCGAGGCGCCGGGCCCCACAGCTCCGCAGCCAAATGCAGGTCGCCATGGCCCGGGCAACGACGGCGACAGGAAACAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474784.5
ENST00000475417.1
CDS GCA 72 bp CCCGATGTGGATGTGGCCGGGGCGGCTGTAGCCTGGTaGGCCCACCACGAGGTCACCGTGCCCATCCTGGTT +
Preference number: 6 (lower is better)
Translates to: PDVDVAGAAVAW*AHHEVTVPILV
Trigger: AACCAGGATGGGCACGGTGACCTCGTGGTGGGCGCACCAGGCTACAGCCGCCCCGGCCACATCCACATCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS GCA 72 bp CAGGCCAGGCCACAACCTGTTTCCTGTCGCCGTCGTTaGCCGGGCCATGGCGACCTGCATTTGGCTGCGGAG +
Preference number: 6 (lower is better)
Translates to: QARPQPVSCRRR*PGHGDLHLAAE
Trigger: CTCCGCAGCCAAATGCAGGTCGCCATGGCCCGGGCAACGACGGCGACAGGAAACAGGTTGTGGCCTGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474784.5
ENST00000475417.1
CDS CCA 72 bp ACAACCTGTTTCCTGTCGCCGTCGTTGCCCGGGCCATaGCGACCTGCATTTGGCTGCGGAGCTGTGGGGCCC +
Preference number: 6 (lower is better)
Translates to: TTCFLSPSLPGP*RPAFGCGAVGP
Trigger: GGGCCCCACAGCTCCGCAGCCAAATGCAGGTCGCCATGGCCCGGGCAACGACGGCGACAGGAAACAGGTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474784.5
ENST00000475417.1
CDS CAA 72 bp GCAGGCCAGGCCACAACCTGTTTCCTGTCGCCGTCGTaGCCCGGGCCATGGCGACCTGCATTTGGCTGCGGA +
Preference number: 6 (lower is better)
Translates to: AGQATTCFLSPS*PGPWRPAFGCG
Trigger: TCCGCAGCCAAATGCAGGTCGCCATGGCCCGGGCAACGACGGCGACAGGAAACAGGTTGTGGCCTGGCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474784.5
ENST00000475417.1
CDS TCA 72 bp GGTCAACAGGTGGCAGGCCCAGGTCATTGCCGTAGATaGGGTACACGCGCCCGATGTGGATGTGGCCGGGGC +
Preference number: 6 (lower is better)
Translates to: GQQVAGPGHCRR*GTRARCGCGRG
Trigger: GCCCCGGCCACATCCACATCGGGCGCGTGTACCTCATCTACGGCAATGACCTGGGCCTGCCACCTGTTGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CCA 72 bp CCTGGTGCGCCCACCACGAGGTCACCGTGCCCATCCTaGTTGAGGTCAGCTGAGGTCATTGCCCAGCCAAGC +
Preference number: 6 (lower is better)
Translates to: PGAPTTRSPCPS*LRSAEVIAQPS
Trigger: GCTTGGCTGGGCAATGACCTCAGCTGACCTCAACCAGGATGGGCACGGTGACCTCGTGGTGGGCGCACCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CAA 72 bp GGTGCGCCCACCACGAGGTCACCGTGCCCATCCTGGTaGAGGTCAGCTGAGGTCATTGCCCAGCCAAGCCTC +
Preference number: 6 (lower is better)
Translates to: GAPTTRSPCPSW*RSAEVIAQPSL
Trigger: GAGGCTTGGCTGGGCAATGACCTCAGCTGACCTCAACCAGGATGGGCACGGTGACCTCGTGGTGGGCGCACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CAA 72 bp GAGGGCTGGAAGCCTTCAAGGATCCTGTGGGCCTCCTaGTCCAGGTCCAGGTCAACAGGTGGCAGGCCCAGG +
Preference number: 6 (lower is better)
Translates to: EGWKPSRILWAS*SRSRSTGGRPR
Trigger: CCTGGGCCTGCCACCTGTTGACCTGGACCTGGACAAGGAGGCCCACAGGATCCTTGAAGGCTTCCAGCCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CAA 90 bp AACCGACCTGAGGGCTGGAAGCCTTCAAGGATCCTGTGGGCCTCCTaGTCCAGGTCCAGGTCAACAGGTGGCAGGCCCAGGTCATTGCCG +
Preference number: 6 (lower is better)
Translates to: NRPEGWKPSRILWAS*SRSRSTGGRPRSLP
Trigger: CGGCAATGACCTGGGCCTGCCACCTGTTGACCTGGACCTGGACAAGGAGGCCCACAGGATCCTTGAAGGCTTCCAGCCCTCAGGTCGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CCA 72 bp CCTGTGGGCCTCCTTGTCCAGGTCCAGGTCAACAGGTaGCAGGCCCAGGTCATTGCCGTAGATGAGGTACAC +
Preference number: 6 (lower is better)
Translates to: PVGLLVQVQVNR*QAQVIAVDEVH
Trigger: GTGTACCTCATCTACGGCAATGACCTGGGCCTGCCACCTGTTGACCTGGACCTGGACAAGGAGGCCCACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS TCA 72 bp CACGAGGTCACCGTGCCCATCCTGGTTGAGGTCAGCTaGGGTCATTGCCCAGCCAAGCCTCGCATAAGGAAA +
Preference number: 6 (lower is better)
Translates to: HEVTVPILVEVS*GHCPAKPRIRK
Trigger: TTTCCTTATGCGAGGCTTGGCTGGGCAATGACCTCAGCTGACCTCAACCAGGATGGGCACGGTGACCTCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CCA 72 bp TCAGATGTGAGTGCGTACATGCGAGTGGCTCCGCCTTaGTGTAGGGTCACGGTCAGGAATGCCACCTTAGAC +
Preference number: 6 (lower is better)
Translates to: SDVSAYMRVAPP*CRVTVRNATLD
Trigger: GTCTAAGGTGGCATTCCTGACCGTGACCCTACACCAAGGCGGAGCCACTCGCATGTACGCACTCACATCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS TCA 72 bp TCTGCTTCCCTCCACCTGGTGCAAAAGGGGAGCCGATaGCCAGATCGGGTTCACTGTCTCCATTCACATCTG +
Preference number: 6 (lower is better)
Translates to: SASLHLVQKGSR*PDRVHCLHSHL
Trigger: CAGATGTGAATGGAGACAGTGAACCCGATCTGGTCATCGGCTCCCCTTTTGCACCAGGTGGAGGGAAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS TCA 72 bp CACACGGTGAACCTCTATGGCAGAGAGAACCCAACATaGTCAGCAGGCCAGGCCACAACCTGTTTCCTGTCG +
Preference number: 6 (lower is better)
Translates to: HTVNLYGRENPT*SAGQATTCFLS
Trigger: CGACAGGAAACAGGTTGTGGCCTGGCCTGCTGATCATGTTGGGTTCTCTCTGCCATAGAGGTTCACCGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474784.5
ENST00000475417.1
CDS GCA 72 bp GGAGAAGTCTTCCTCGCCTCTCACCGTCCAGTTGGCTaGCTCCACGTTCAGTTTTTCTTTGTCGCTCAGGCT +
Preference number: 6 (lower is better)
Translates to: GEVFLASHRPVG*LHVQFFFVAQA
Trigger: AGCCTGAGCGACAAAGAAAAACTGAACGTGGAGGCAGCCAACTGGACGGTGAGAGGCGAGGAAGACTTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CAA 90 bp GAATATCCAAACCAGGAGAAGTCTTCCTCGCCTCTCACCGTCCAGTaGGCTGCCTCCACGTTCAGTTTTTCTTTGTCGCTCAGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: EYPNQEKSSSPLTVQ*AASTFSFSLSLRLG
Trigger: CCCCAGCCTGAGCGACAAAGAAAAACTGAACGTGGAGGCAGCCAACTGGACGGTGAGAGGCGAGGAAGACTTCTCCTGGTTTGGATATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CCA 72 bp TCTACGTGTGTTGAAAGGCCACACGGTGAACCTCTATaGCAGAGAGAACCCAACATGATCAGCAGGCCAGGC +
Preference number: 6 (lower is better)
Translates to: STCVERPHGEPL*QREPNMISRPG
Trigger: GCCTGGCCTGCTGATCATGTTGGGTTCTCTCTGCCATAGAGGTTCACCGTGTGGCCTTTCAACACACGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230036.2
ENST00000378243.8
ENST00000474784.5
ENST00000475417.1
ENST00000486892.5
CDS CCA 72 bp ACCAGGAGAAGTCTTCCTCGCCTCTCACCGTCCAGTTaGCTGCCTCCACGTTCAGTTTTTCTTTGTCGCTCA +
Preference number: 6 (lower is better)
Translates to: TRRSLPRLSPSS*LPPRSVFLCRS
Trigger: TGAGCGACAAAGAAAAACTGAACGTGGAGGCAGCCAACTGGACGGTGAGAGGCGAGGAAGACTTCTCCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CAA 72 bp AACCAGGAGAAGTCTTCCTCGCCTCTCACCGTCCAGTaGGCTGCCTCCACGTTCAGTTTTTCTTTGTCGCTC +
Preference number: 6 (lower is better)
Translates to: NQEKSSSPLTVQ*AASTFSFSLSL
Trigger: GAGCGACAAAGAAAAACTGAACGTGGAGGCAGCCAACTGGACGGTGAGAGGCGAGGAAGACTTCTCCTGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CAA 72 bp CCCCATTGCCTTGTCTCCAGAAATGGTAAACCAGCTTaGGCCGTTTGGTGGGAAGTAGCCATACACCCTCCC +
Preference number: 6 (lower is better)
Translates to: PHCLVSRNGKPA*AVWWEVAIHPP
Trigger: GGGAGGGTGTATGGCTACTTCCCACCAAACGGCCAAAGCTGGTTTACCATTTCTGGAGACAAGGCAATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CAA 72 bp CACGTCATCGTACGTAGGGGCTCCAACCAGCAGCACTaGTTTCAGAGTCCCATTCATCAGTACGTGGCCACT +
Preference number: 6 (lower is better)
Translates to: HVIVRRGSNQQH*FQSPIHQYVAT
Trigger: AGTGGCCACGTACTGATGAATGGGACTCTGAAACAAGTGCTGCTGGTTGGAGCCCCTACGTACGATGACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CAA 90 bp CACCTTAGACACGTCATCGTACGTAGGGGCTCCAACCAGCAGCACTaGTTTCAGAGTCCCATTCATCAGTACGTGGCCACTGGAAAGGGA +
Preference number: 6 (lower is better)
Translates to: HLRHVIVRRGSNQQH*FQSPIHQYVATGKG
Trigger: TCCCTTTCCAGTGGCCACGTACTGATGAATGGGACTCTGAAACAAGTGCTGCTGGTTGGAGCCCCTACGTACGATGACGTGTCTAAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CAA 90 bp ACCCAGTTTCCCCATTGCCTTGTCTCCAGAAATGGTAAACCAGCTTaGGCCGTTTGGTGGGAAGTAGCCATACACCCTCCCAAGGCTCTT +
Preference number: 6 (lower is better)
Translates to: TQFPHCLVSRNGKPA*AVWWEVAIHPPKAL
Trigger: AAGAGCCTTGGGAGGGTGTATGGCTACTTCCCACCAAACGGCCAAAGCTGGTTTACCATTTCTGGAGACAAGGCAATGGGGAAACTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CAA 90 bp ATAGGAGCCGTGAAAATCAATAGCTCCCATGGTCCTAAGGAATCCTaGTTCAAGGCCCAGACTATGCCAGCTGACATCTGCCGCCATGTG +
Preference number: 6 (lower is better)
Translates to: IGAVKINSSHGPKES*FKAQTMPADICRHV
Trigger: CACATGGCGGCAGATGTCAGCTGGCATAGTCTGGGCCTTGAACAAGGATTCCTTAGGACCATGGGAGCTATTGATTTTCACGGCTCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230036.2
ENST00000378243.8
ENST00000474784.5
ENST00000486892.5
CDS GCA 72 bp ATTTCATCTAAGCCATCATCATCCAGGTCACTCAAGTaGAGAACGCCACCAAATCGGGAGAAGCGGCGGTCT +
Preference number: 6 (lower is better)
Translates to: ISSKPSSSRSLK*RTPPNREKRRS
Trigger: AGACCGCCGCTTCTCCCGATTTGGTGGCGTTCTGCACTTGAGTGACCTGGATGATGATGGCTTAGATGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CCA 72 bp CTGCCTCCACGTTCAGTTTTTCTTTGTCGCTCAGGCTaGGGCCAGAATAAAACGCAGCCACAATTCCCTTCT +
Preference number: 6 (lower is better)
Translates to: LPPRSVFLCRSG*GQNKTQPQFPS
Trigger: AGAAGGGAATTGTGGCTGCGTTTTATTCTGGCCCCAGCCTGAGCGACAAAGAAAAACTGAACGTGGAGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CCA 72 bp CTTGTCTCCAGAAATGGTAAACCAGCTTTGGCCGTTTaGTGGGAAGTAGCCATACACCCTCCCAAGGCTCTT +
Preference number: 6 (lower is better)
Translates to: LVSRNGKPALAV*WEVAIHPPKAL
Trigger: AAGAGCCTTGGGAGGGTGTATGGCTACTTCCCACCAAACGGCCAAAGCTGGTTTACCATTTCTGGAGACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS TCA 72 bp ACCAACAGCAAGGTTCTGTTGTCCACAGTGACACCGTaGAGGGAATATCCAAACCAGGAGAAGTCTTCCTCG +
Preference number: 6 (lower is better)
Translates to: TNSKVLLSTVTP*REYPNQEKSSS
Trigger: CGAGGAAGACTTCTCCTGGTTTGGATATTCCCTTCACGGTGTCACTGTGGACAACAGAACCTTGCTGTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CCA 72 bp GTCTCCAGAAATGGTAAACCAGCTTTGGCCGTTTGGTaGGAAGTAGCCATACACCCTCCCAAGGCTCTTTTT +
Preference number: 6 (lower is better)
Translates to: VSRNGKPALAVW*EVAIHPPKALF
Trigger: AAAAAGAGCCTTGGGAGGGTGTATGGCTACTTCCCACCAAACGGCCAAAGCTGGTTTACCATTTCTGGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CCA 72 bp CTTGTTTCAGAGTCCCATTCATCAGTACGTGGCCACTaGAAAGGGAAGTACCCAGTTTCCCCATTGCCTTGT +
Preference number: 6 (lower is better)
Translates to: LVSESHSSVRGH*KGKYPVSPLPC
Trigger: ACAAGGCAATGGGGAAACTGGGTACTTCCCTTTCCAGTGGCCACGTACTGATGAATGGGACTCTGAAACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CCA 72 bp AGCAGCACTTGTTTCAGAGTCCCATTCATCAGTACGTaGCCACTGGAAAGGGAAGTACCCAGTTTCCCCATT +
Preference number: 6 (lower is better)
Translates to: SSTCFRVPFIST*PLEREVPSFPI
Trigger: AATGGGGAAACTGGGTACTTCCCTTTCCAGTGGCCACGTACTGATGAATGGGACTCTGAAACAAGTGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS TCA 72 bp AGGCCCAGACTATGCCAGCTGACATCTGCCGCCATGTaGGAAGTAATTCCAAACAAGAAAGCTACCAGTTTC +
Preference number: 6 (lower is better)
Translates to: RPRLCQLTSAAM*EVIPNKKATSF
Trigger: GAAACTGGTAGCTTTCTTGTTTGGAATTACTTCTCACATGGCGGCAGATGTCAGCTGGCATAGTCTGGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230036.2
ENST00000378243.8
ENST00000474784.5
ENST00000475417.1
ENST00000486892.5
CDS TCA 72 bp CACATCTCCTCCAAAATCACCAGCCGAATGAGCCTCTaGATAGGAGCCGTGAAAATCAATAGCTCCCATGGT +
Preference number: 6 (lower is better)
Translates to: HISSKITSRMSL*IGAVKINSSHG
Trigger: ACCATGGGAGCTATTGATTTTCACGGCTCCTATTCAGAGGCTCATTCGGCTGGTGATTTTGGAGGAGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230036.2
ENST00000474784.5
CDS GCA 72 bp TCCTTGTTCAAGGCCCAGACTATGCCAGCTGACATCTaGCGCCATGTGAGAAGTAATTCCAAACAAGAAAGC +
Preference number: 6 (lower is better)
Translates to: SLFKAQTMPADI*RHVRSNSKQES
Trigger: GCTTTCTTGTTTGGAATTACTTCTCACATGGCGGCAGATGTCAGCTGGCATAGTCTGGGCCTTGAACAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230036.2
ENST00000378243.8
ENST00000474784.5
ENST00000475417.1
ENST00000486892.5
CDS CCA 72 bp GATGAAGTACAAGTAAGGTTTCCCCACTCCTGTGTGTaGTCATGGGAAGCCATTAGAGGGAAGCATGGATGT +
Preference number: 6 (lower is better)
Translates to: DEVQVRFPHSCV*SWEAIRGKHGC
Trigger: ACATCCATGCTTCCCTCTAATGGCTTCCCATGACCACACACAGGAGTGGGGAAACCTTACTTGTACTTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492917.2
CDS CAA 72 bp GTGAAAATCAATAGCTCCCATGGTCCTAAGGAATCCTaGTTCAAGGCCCAGACTATGCCAGCTGACATCTGC +
Preference number: 6 (lower is better)
Translates to: VKINSSHGPKES*FKAQTMPADIC
Trigger: GCAGATGTCAGCTGGCATAGTCTGGGCCTTGAACAAGGATTCCTTAGGACCATGGGAGCTATTGATTTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230036.2
ENST00000378243.8
ENST00000474784.5
ENST00000486892.5
CDS CAA 90 bp GTCCTGGCAAGAAATGGTGATGTTAGGGGAAGAAGACATTCCTCCTaGTTTGGAACCAAAGTAGACATACACGGCACCTTTGTAGGTGAG +
Preference number: 6 (lower is better)
Translates to: VLARNGDVRGRRHSS*FGTKVDIHGTFVGE
Trigger: CTCACCTACAAAGGTGCCGTGTATGTCTACTTTGGTTCCAAACAAGGAGGAATGTCTTCTTCCCCTAACATCACCATTTCTTGCCAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS TCA 72 bp GATGCTAAGGGGCTGGAGACGTGCTTTTGTGACAACTaGGAGCCACCTATGAACATTGTCCTTATGTTCCTT +
Preference number: 6 (lower is better)
Translates to: DAKGLETCFCDN*EPPMNIVLMFL
Trigger: AAGGAACATAAGGACAATGTTCATAGGTGGCTCTCAGTTGTCACAAAAGCACGTCTCCAGCCCCTTAGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS GCA 72 bp GGGAAGGGGATAGTTCTCTCGGATATAATGAACGCTTaGATTAAGAAACGGAGTCCAGTGAGTGCTCTCAGA +
Preference number: 6 (lower is better)
Translates to: GKGIVLSDIMNA*IKKRSPVSALR
Trigger: TCTGAGAGCACTCACTGGACTCCGTTTCTTAATGCAAGCGTTCATTATATCCGAGAGAACTATCCCCTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230036.2
ENST00000378243.8
ENST00000474784.5
ENST00000475417.1
ENST00000486892.5
CDS CAA 72 bp TTGCATTTGCCAGTCATGTCACCAAGGGTGGTCTCTTaGCCATTATATACATATACTCGGCCGTCTTCTCCC +
Preference number: 6 (lower is better)
Translates to: LHLPVMSPRVVS*PLYTYTRPSSP
Trigger: GGGAGAAGACGGCCGAGTATATGTATATAATGGCAAAGAGACCACCCTTGGTGACATGACTGGCAAATGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CAA 90 bp ATCCATGATTTGCATTTGCCAGTCATGTCACCAAGGGTGGTCTCTTaGCCATTATATACATATACTCGGCCGTCTTCTCCCCCAATCAGT +
Preference number: 6 (lower is better)
Translates to: IHDLHLPVMSPRVVS*PLYTYTRPSSPPIS
Trigger: ACTGATTGGGGGAGAAGACGGCCGAGTATATGTATATAATGGCAAAGAGACCACCCTTGGTGACATGACTGGCAAATGCAAATCATGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CCA 72 bp CATAAGGAAATGACAAGAAGTAAGATGCTAAGGGGCTaGAGACGTGCTTTTGTGACAACTGAGAGCCACCTA +
Preference number: 6 (lower is better)
Translates to: HKEMTRSKMLRG*RRAFVTTESHL
Trigger: TAGGTGGCTCTCAGTTGTCACAAAAGCACGTCTCCAGCCCCTTAGCATCTTACTTCTTGTCATTTCCTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS TCA 72 bp ATATTGGGCCTTTTCTTCTGGACATGGAGTTATCCATaGTTTGCATTTGCCAGTCATGTCACCAAGGGTGGT +
Preference number: 6 (lower is better)
Translates to: ILGLFFWTWSYP*FAFASHVTKGG
Trigger: ACCACCCTTGGTGACATGACTGGCAAATGCAAATCATGGATAACTCCATGTCCAGAAGAAAAGGCCCAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS TCA 72 bp ATAAACAGTACCAAAATCACCAGCCGAATGAGCCTCTaGATAGGAGCCGTGAAAATCAATAGCTCCCATGGT +
Preference number: 6 (lower is better)
Translates to: INSTKITSRMSL*IGAVKINSSHG
Trigger: ACCATGGGAGCTATTGATTTTCACGGCTCCTATTCAGAGGCTCATTCGGCTGGTGATTTTGGTACTGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378243.8
ENST00000486892.5
CDS GCA 72 bp TTTCTTCTGGACATGGAGTTATCCATGATTTGCATTTaGCAGTCATGTCACCAAGGGTGGTCTCTTTGCCAT +
Preference number: 6 (lower is better)
Translates to: FLLDMELSMICI*QSCHQGWSLCH
Trigger: ATGGCAAAGAGACCACCCTTGGTGACATGACTGGCAAATGCAAATCATGGATAACTCCATGTCCAGAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CCA 72 bp TCCATGATTTGCATTTGCCAGTCATGTCACCAAGGGTaGTCTCTTTGCCATTATATACATATACTCGGCCGT +
Preference number: 6 (lower is better)
Translates to: SMICICQSCHQG*SLCHYIHILGR
Trigger: ACGGCCGAGTATATGTATATAATGGCAAAGAGACCACCCTTGGTGACATGACTGGCAAATGCAAATCATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CAA 90 bp TATTGGGCCTTTTCTTCTGGACATGGAGTTATCCATGATTTGCATTaGCCAGTCATGTCACCAAGGGTGGTCTCTTTGCCATTATATACA +
Preference number: 6 (lower is better)
Translates to: YWAFSSGHGVIHDLH*PVMSPRVVSLPLYT
Trigger: TGTATATAATGGCAAAGAGACCACCCTTGGTGACATGACTGGCAAATGCAAATCATGGATAACTCCATGTCCAGAAGAAAAGGCCCAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CAA 90 bp AATACATATTGGGCCTTTTCTTCTGGACATGGAGTTATCCATGATTaGCATTTGCCAGTCATGTCACCAAGGGTGGTCTCTTTGCCATTA +
Preference number: 6 (lower is better)
Translates to: NTYWAFSSGHGVIHD*HLPVMSPRVVSLPL
Trigger: TAATGGCAAAGAGACCACCCTTGGTGACATGACTGGCAAATGCAAATCATGGATAACTCCATGTCCAGAAGAAAAGGCCCAATATGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230036.2
CDS CCA 72 bp GAAACAGCTAGCATCTCACCATACATTTCTAAGAACTaGATATGTGAACAATCAACGATTACATTTTCGGTG +
Preference number: 6 (lower is better)
Translates to: ETASISPYISKN*ICEQSTITFSV
Trigger: CACCGAAAATGTAATCGTTGATTGTTCACATATCCAGTTCTTAGAAATGTATGGTGAGATGCTAGCTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230036.2
ENST00000474784.5