Pregenerated sensors for GPHB5 (Homo sapiens)
Ensembl gene IDs: ENSG00000179600Ensembl transcript IDs: ENST00000314140.2, ENST00000621500.2
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | AACAGTCTTGCATCCAGGAAGTATAACTGCATGTGCTaGTCACACAGGTGGGTCTGCAGAGAGCAGCTAGCG | + |
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Preference number: 3 (lower is better) Translates to: NSLASRKYNCMC*SHRWVCREQLA Trigger: CGCTAGCTGCTCTCTGCAGACCCACCTGTGTGAGCAGCACATGCAGTTATACTTCCTGGATGCAAGACTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS-3UTR GCA 90 bp | AGTCTTGCATCCAGGAAGTATAACTGCATGTGCTGCTCACACAGGTGGGTCTGCCACAGCCCACAAAGGTaGGCAGGTTCCCACTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: SLASRKYNCMCCSHRWVCHSPQR*AGSHWR Trigger: CCTCCAGTGGGAACCTGCGCACCTTTGTGGGCTGTG...GCAGACCCACCTGTGTGAGCAGCACATGCAGTTATACTTCCTGGATGCAAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS-3UTR CCA 90 bp | GTCTTGCATCCAGGAAGTATAACTGCATGTGCTGCTCACACAGGTGGGTCTGCAAAGGCCCCTGCAGCCTaGCTTCTTGGCCAGGAAAGT | + |
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Preference number: 4 (lower is better) Translates to: VLHPGSITACAAHTGGSAKAPAA*LLGQES Trigger: ACTTTCCTGGCCAAGAAGCCAGGCTGCAGGGGCCTT...TGCAGACCCACCTGTGTGAGCAGCACATGCAGTTATACTTCCTGGATGCAAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS-3UTR CCA 90 bp | ACAGTCTTGCATCCAGGAAGTATAACTGCATGTGCTGCTCACACAGGTGGGTCTGCTAGCGGCCTCAGATaGTCTCACACTCCGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: TVLHPGSITACAAHTGGSASGLR*SHTPWW Trigger: CCACCACGGAGTGTGAGACCATCTGAGGCCGCTAGC...AGACCCACCTGTGTGAGCAGCACATGCAGTTATACTTCCTGGATGCAAGACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS-3UTR CCA 90 bp | AACAGTCTTGCATCCAGGAAGTATAACTGCATGTGCTGCTCACACAGGTGGGTCGAAGGAGGAGGGCCATaGGGCCAAGGAAGAGGAATG | + |
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Preference number: 4 (lower is better) Translates to: NSLASRKYNCMCCSHRWVEGGGP*GQGRGM Trigger: CATTCCTCTTCCTTGGCCCCATGGCCCTCCTCCTTC...GACCCACCTGTGTGAGCAGCACATGCAGTTATACTTCCTGGATGCAAGACTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS-3UTR CCA 90 bp | TTAAACAGTCTTGCATCCAGGAAGTATAACTGCATGTGCTGCTCACACAGGTGGTGCGCAGGTTCCCACTaGAGGCACCGAGGACACAGC | + |
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Preference number: 4 (lower is better) Translates to: LNSLASRKYNCMCCSHRWCAGSH*RHRGHS Trigger: GCTGTGTCCTCGGTGCCTCCAGTGGGAACCTGCGCA...CCACCTGTGTGAGCAGCACATGCAGTTATACTTCCTGGATGCAAGACTGTTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS-3UTR TCA 90 bp | AAATTAAACAGTCTTGCATCCAGGAAGTATAACTGCATGTGCTGCTCACACAGGAGCAGGCATCCGTGGTaGTCCGAAGGCCCCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: KLNSLASRKYNCMCCSHRSRHPW*SEGPCS Trigger: GCTGCAGGGGCCTTCGGATCACCACGGATGCCTGCT...CCTGTGTGAGCAGCACATGCAGTTATACTTCCTGGATGCAAGACTGTTTAATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS-3UTR CCA 90 bp | GTGTGGTCGAAATTAAACAGTCTTGCATCCAGGAAGTATAACTGCATGTGCTGCTCTCACACTCCGTGGTaGCAGTGGAGCAGGCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: VWSKLNSLASRKYNCMCCSHTPW*QWSRLR Trigger: GCGGAGCCTGCTCCACTGCCACCACGGAGTGTGAGA...GCAGCACATGCAGTTATACTTCCTGGATGCAAGACTGTTTAATTTCGACCACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS-3UTR GCA 90 bp | TGGGTGTGGTCGAAATTAAACAGTCTTGCATCCAGGAAGTATAACTGCATGTGCTCACACAGGTGGGTCTaGAGAGAGCAGCTAGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: WVWSKLNSLASRKYNCMCSHRWV*REQLAA Trigger: GGCCGCTAGCTGCTCTCTGCAGACCCACCTGTGTGA...GCACATGCAGTTATACTTCCTGGATGCAAGACTGTTTAATTTCGACCACACCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS-3UTR CCA 90 bp | AAATTAAACAGTCTTGCATCCAGGAAGTATAACTGCATGTGCTGCTCACACAGGACTCCGTGGTGGCAGTaGAGCAGGCTCCGCAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: KLNSLASRKYNCMCCSHRTPWWQ*SRLRSH Trigger: GTGACTGCGGAGCCTGCTCCACTGCCACCACGGAGT...CCTGTGTGAGCAGCACATGCAGTTATACTTCCTGGATGCAAGACTGTTTAATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS-3UTR GCA 90 bp | AACAGTCTTGCATCCAGGAAGTATAACTGCATGTGCTGCTCACACAGGTGGGTCTATAACTGCATGTGCTaGTCACACAGGTGGGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: NSLASRKYNCMCCSHRWVYNCMC*SHRWVC Trigger: GCAGACCCACCTGTGTGAGCAGCACATGCAGTTATA...GACCCACCTGTGTGAGCAGCACATGCAGTTATACTTCCTGGATGCAAGACTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS-3UTR CCA 90 bp | GTGTGGTCGAAATTAAACAGTCTTGCATCCAGGAAGTATAACTGCATGTGCTGCCGCAGTCACAGCGGATaGCCACGGGATAGGTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: VWSKLNSLASRKYNCMCCRSHSG*PRDRCR Trigger: TCTACACCTATCCCGTGGCCATCCGCTGTGACTGCG...GCAGCACATGCAGTTATACTTCCTGGATGCAAGACTGTTTAATTTCGACCACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS-3UTR CCA 90 bp | TGGTCGAAATTAAACAGTCTTGCATCCAGGAAGTATAACTGCATGTGCTGCTCATGGTCTCACACTCCGTaGTGGCAGTGGAGCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: WSKLNSLASRKYNCMCCSWSHTP*WQWSRL Trigger: GAGCCTGCTCCACTGCCACCACGGAGTGTGAGACCA...TGAGCAGCACATGCAGTTATACTTCCTGGATGCAAGACTGTTTAATTTCGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS-3UTR GCA 90 bp | AACAGTCTTGCATCCAGGAAGTATAACTGCATGTGCTGCTCACACAGGTGGGTCTCCAGGAAGTATAACTaGATGTGCTGCTCACACAGG | + |
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Preference number: 4 (lower is better) Translates to: NSLASRKYNCMCCSHRWVSRKYN*MCCSHR Trigger: CCTGTGTGAGCAGCACATGCAGTTATACTTCCTGGA...GACCCACCTGTGTGAGCAGCACATGCAGTTATACTTCCTGGATGCAAGACTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS-3UTR TCA 90 bp | TGGGTGTGGTCGAAATTAAACAGTCTTGCATCCAGGAAGTATAACTGCATGTGCCACAGTTGGGCAGCTTaGCAGTCACCTGTTTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: WVWSKLNSLASRKYNCMCHSWAA*QSPVWS Trigger: AGACCAAACAGGTGACTGTCAAGCTGCCCAACTGTG...GCACATGCAGTTATACTTCCTGGATGCAAGACTGTTTAATTTCGACCACACCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS-3UTR CCA 90 bp | TGGTCGAAATTAAACAGTCTTGCATCCAGGAAGTATAACTGCATGTGCTGCTCATGCTGCTCACACAGGTaGGTCTGCAGAGAGCAGCTA | + |
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Preference number: 4 (lower is better) Translates to: WSKLNSLASRKYNCMCCSCCSHR*VCREQL Trigger: TAGCTGCTCTCTGCAGACCCACCTGTGTGAGCAGCA...TGAGCAGCACATGCAGTTATACTTCCTGGATGCAAGACTGTTTAATTTCGACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS-3UTR GCA 90 bp | GTGTGGTCGAAATTAAACAGTCTTGCATCCAGGAAGTATAACTGCATGTGCTGCGCCAAGGAAGAGGAATaGCAGCTTCATGCTAATCTT | + |
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Preference number: 4 (lower is better) Translates to: VWSKLNSLASRKYNCMCCAKEEE*QLHANL Trigger: AAGATTAGCATGAAGCTGGCATTCCTCTTCCTTGGC...GCAGCACATGCAGTTATACTTCCTGGATGCAAGACTGTTTAATTTCGACCACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS-3UTR GCA 90 bp | TCGAAATTAAACAGTCTTGCATCCAGGAAGTATAACTGCATGTGCTGCTCACACAAGTATAACTGCATGTaGTGCTCACACAGGTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: SKLNSLASRKYNCMCCSHKYNCM*CSHRWV Trigger: GACCCACCTGTGTGAGCAGCACATGCAGTTATACTT...GTGTGAGCAGCACATGCAGTTATACTTCCTGGATGCAAGACTGTTTAATTTCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS-3UTR CCA 90 bp | GTGTGGTCGAAATTAAACAGTCTTGCATCCAGGAAGTATAACTGCATGTGCTGCGGTAGAAGTTTGCCCTaGGTAAATGTCTCTACCTTC | + |
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Preference number: 4 (lower is better) Translates to: VWSKLNSLASRKYNCMCCGRSLP*VNVSTF Trigger: GAAGGTAGAGACATTTACCCAGGGCAAACTTCTACC...GCAGCACATGCAGTTATACTTCCTGGATGCAAGACTGTTTAATTTCGACCACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS-3UTR TCA 90 bp | TCGAAATTAAACAGTCTTGCATCCAGGAAGTATAACTGCATGTGCTGCTCACACTTCAGGAAGTCACAATaGATGGTAGAAGTTTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: SKLNSLASRKYNCMCCSHFRKSQ*MVEVCP Trigger: AGGGCAAACTTCTACCATTCATTGTGACTTCCTGAA...GTGTGAGCAGCACATGCAGTTATACTTCCTGGATGCAAGACTGTTTAATTTCGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS-3UTR GCA 90 bp | GTGTGGTCGAAATTAAACAGTCTTGCATCCAGGAAGTATAACTGCATGTGCTGCTTTAGAGCTGAAACTTaGACTAAGATTTCAGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: VWSKLNSLASRKYNCMCCFRAET*TKISGS Trigger: ACTTCCTGAAATCTTAGTGCAAGTTTCAGCTCTAAA...GCAGCACATGCAGTTATACTTCCTGGATGCAAGACTGTTTAATTTCGACCACAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS CCA 90 bp | CACACTCCGTGGTGGCAGTGGAGCAGGCTCCGCAGTCACAGCGGATaGCCACGGGATAGGTGTAGAAGGGGTCGACTCCCGGGGCACAGT | + |
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Preference number: 5 (lower is better) Translates to: HTPWWQWSRLRSHSG*PRDRCRRGRLPGHS Trigger: ACTGTGCCCCGGGAGTCGACCCCTTCTACACCTATCCCGTGGCCATCCGCTGTGACTGCGGAGCCTGCTCCACTGCCACCACGGAGTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000314140.2 ENST00000621500.2 |
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| CDS CCA 90 bp | GGTCTGCAGAGAGCAGCTAGCGGCCTCAGATGGTCTCACACTCCGTaGTGGCAGTGGAGCAGGCTCCGCAGTCACAGCGGATGGCCACGG | + |
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Preference number: 5 (lower is better) Translates to: GLQRAASGLRWSHTP*WQWSRLRSHSGWPR Trigger: CCGTGGCCATCCGCTGTGACTGCGGAGCCTGCTCCACTGCCACCACGGAGTGTGAGACCATCTGAGGCCGCTAGCTGCTCTCTGCAGACC 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS CCA 90 bp | GCGACCCCAGCAGGCATCCGTGGTGATCCGAAGGCCCCTGCAGCCTaGCTTCTTGGCCAGGAAAGTAAACTCCCTCACGGCACAGCCCAC | + |
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Preference number: 5 (lower is better) Translates to: ATPAGIRGDPKAPAA*LLGQESKLPHGTAH Trigger: GTGGGCTGTGCCGTGAGGGAGTTTACTTTCCTGGCCAAGAAGCCAGGCTGCAGGGGCCTTCGGATCACCACGGATGCCTGCTGGGGTCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000314140.2 ENST00000621500.2 |
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| CDS CCA 90 bp | CTGCAGAGAGCAGCTAGCGGCCTCAGATGGTCTCACACTCCGTGGTaGCAGTGGAGCAGGCTCCGCAGTCACAGCGGATGGCCACGGGAT | + |
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Preference number: 5 (lower is better) Translates to: LQRAASGLRWSHTPW*QWSRLRSHSGWPRD Trigger: ATCCCGTGGCCATCCGCTGTGACTGCGGAGCCTGCTCCACTGCCACCACGGAGTGTGAGACCATCTGAGGCCGCTAGCTGCTCTCTGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS CCA 90 bp | CTGCTCACACAGGTGGGTCTGCAGAGAGCAGCTAGCGGCCTCAGATaGTCTCACACTCCGTGGTGGCAGTGGAGCAGGCTCCGCAGTCAC | + |
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Preference number: 5 (lower is better) Translates to: LLTQVGLQRAASGLR*SHTPWWQWSRLRSH Trigger: GTGACTGCGGAGCCTGCTCCACTGCCACCACGGAGTGTGAGACCATCTGAGGCCGCTAGCTGCTCTCTGCAGACCCACCTGTGTGAGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS GCA 90 bp | GCATCCAGGAAGTATAACTGCATGTGCTGCTCACACAGGTGGGTCTaGAGAGAGCAGCTAGCGGCCTCAGATGGTCTCACACTCCGTGGT | + |
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Preference number: 5 (lower is better) Translates to: ASRKYNCMCCSHRWV*REQLAASDGLTLRG Trigger: ACCACGGAGTGTGAGACCATCTGAGGCCGCTAGCTGCTCTCTGCAGACCCACCTGTGTGAGCAGCACATGCAGTTATACTTCCTGGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS-3UTR CAA 90 bp | AGTCTTGCATCCAGGAAGTATAACTGCATGTGCTGCTCACACAGGTGGGTCTGCACTCCCGGGGCACAGTaGGGCAGCTTGACAGTCACC | + |
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Preference number: 5 (lower is better) Translates to: SLASRKYNCMCCSHRWVCTPGAQ*GSLTVT Trigger: GGTGACTGTCAAGCTGCCCAACTGTGCCCCGGGAGT...GCAGACCCACCTGTGTGAGCAGCACATGCAGTTATACTTCCTGGATGCAAGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS TCA 90 bp | GATAGGTGTAGAAGGGGTCGACTCCCGGGGCACAGTTGGGCAGCTTaGCAGTCACCTGTTTGGTCTCGTTGTAGGTACAGACTCGATGAT | + |
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Preference number: 5 (lower is better) Translates to: DRCRRGRLPGHSWAA*QSPVWSRCRYRLDD Trigger: ATCATCGAGTCTGTACCTACAACGAGACCAAACAGGTGACTGTCAAGCTGCCCAACTGTGCCCCGGGAGTCGACCCCTTCTACACCTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000314140.2 ENST00000621500.2 |
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| CDS CCA 90 bp | AGTCTTGCATCCAGGAAGTATAACTGCATGTGCTGCTCACACAGGTaGGTCTGCAGAGAGCAGCTAGCGGCCTCAGATGGTCTCACACTC | + |
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Preference number: 5 (lower is better) Translates to: SLASRKYNCMCCSHR*VCREQLAASDGLTL Trigger: GAGTGTGAGACCATCTGAGGCCGCTAGCTGCTCTCTGCAGACCCACCTGTGTGAGCAGCACATGCAGTTATACTTCCTGGATGCAAGACT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS GCA 90 bp | TCGAAATTAAACAGTCTTGCATCCAGGAAGTATAACTGCATGTGCTaGTCACACAGGTGGGTCTGCAGAGAGCAGCTAGCGGCCTCAGAT | + |
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Preference number: 5 (lower is better) Translates to: SKLNSLASRKYNCMC*SHRWVCREQLAASD Trigger: ATCTGAGGCCGCTAGCTGCTCTCTGCAGACCCACCTGTGTGAGCAGCACATGCAGTTATACTTCCTGGATGCAAGACTGTTTAATTTCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS-3UTR CAA 90 bp | GTCTTGCATCCAGGAAGTATAACTGCATGTGCTGCTCACACAGGTGGGTCTGCAAGCTTCATGCTAATCTaGCAGGAGCCCACTCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: VLHPGSITACAAHTGGSASFMLI*QEPTLL Trigger: AAGAAGAGTGGGCTCCTGCAAGATTAGCATGAAGCT...TGCAGACCCACCTGTGTGAGCAGCACATGCAGTTATACTTCCTGGATGCAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS-3UTR CAA 90 bp | TGGGTGTGGTCGAAATTAAACAGTCTTGCATCCAGGAAGTATAACTGCATGTGCCTGCAGCCTGGCTTCTaGGCCAGGAAAGTAAACTCC | + |
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Preference number: 5 (lower is better) Translates to: WVWSKLNSLASRKYNCMCLQPGF*ARKVNS Trigger: GGAGTTTACTTTCCTGGCCAAGAAGCCAGGCTGCAG...GCACATGCAGTTATACTTCCTGGATGCAAGACTGTTTAATTTCGACCACACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS-3UTR CAA 90 bp | TGGTCGAAATTAAACAGTCTTGCATCCAGGAAGTATAACTGCATGTGCTGCTCAGCACAGTTGGGCAGCTaGACAGTCACCTGTTTGGTC | + |
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Preference number: 5 (lower is better) Translates to: WSKLNSLASRKYNCMCCSAQLGS*TVTCLV Trigger: GACCAAACAGGTGACTGTCAAGCTGCCCAACTGTGC...TGAGCAGCACATGCAGTTATACTTCCTGGATGCAAGACTGTTTAATTTCGACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS-3UTR CAA 90 bp | AAATTAAACAGTCTTGCATCCAGGAAGTATAACTGCATGTGCTGCTCACACAGGATGAATGGTAGAAGTTaGCCCTGGGTAAATGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: KLNSLASRKYNCMCCSHRMNGRS*PWVNVS Trigger: AGAGACATTTACCCAGGGCAAACTTCTACCATTCAT...CCTGTGTGAGCAGCACATGCAGTTATACTTCCTGGATGCAAGACTGTTTAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS TCA 72 bp | CCCAGGTCTCACAGCGACCCCAGCAGGCATCCGTGGTaGTCCGAAGGCCCCTGCAGCCTGGCTTCTTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: PRSHSDPSRHPW*SEGPCSLASWP Trigger: TGGCCAAGAAGCCAGGCTGCAGGGGCCTTCGGATCACCACGGATGCCTGCTGGGGTCGCTGTGAGACCTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000314140.2 ENST00000621500.2 |
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| CDS CCA 72 bp | AGCGGCCTCAGATGGTCTCACACTCCGTGGTGGCAGTaGAGCAGGCTCCGCAGTCACAGCGGATGGCCACGG | + |
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Preference number: 6 (lower is better) Translates to: SGLRWSHTPWWQ*SRLRSHSGWPR Trigger: CCGTGGCCATCCGCTGTGACTGCGGAGCCTGCTCCACTGCCACCACGGAGTGTGAGACCATCTGAGGCCGCT 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS CCA 72 bp | TGGTGGCAGTGGAGCAGGCTCCGCAGTCACAGCGGATaGCCACGGGATAGGTGTAGAAGGGGTCGACTCCCG | + |
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Preference number: 6 (lower is better) Translates to: WWQWSRLRSHSG*PRDRCRRGRLP Trigger: CGGGAGTCGACCCCTTCTACACCTATCCCGTGGCCATCCGCTGTGACTGCGGAGCCTGCTCCACTGCCACCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000314140.2 ENST00000621500.2 |
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| CDS CCA 72 bp | AGAGCAGCTAGCGGCCTCAGATGGTCTCACACTCCGTaGTGGCAGTGGAGCAGGCTCCGCAGTCACAGCGGA | + |
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Preference number: 6 (lower is better) Translates to: RAASGLRWSHTP*WQWSRLRSHSG Trigger: TCCGCTGTGACTGCGGAGCCTGCTCCACTGCCACCACGGAGTGTGAGACCATCTGAGGCCGCTAGCTGCTCT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS CCA 72 bp | CAGGTGGGTCTGCAGAGAGCAGCTAGCGGCCTCAGATaGTCTCACACTCCGTGGTGGCAGTGGAGCAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: QVGLQRAASGLR*SHTPWWQWSRL Trigger: GAGCCTGCTCCACTGCCACCACGGAGTGTGAGACCATCTGAGGCCGCTAGCTGCTCTCTGCAGACCCACCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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| CDS CCA 72 bp | GCAGGCATCCGTGGTGATCCGAAGGCCCCTGCAGCCTaGCTTCTTGGCCAGGAAAGTAAACTCCCTCACGGC | + |
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Preference number: 6 (lower is better) Translates to: AGIRGDPKAPAA*LLGQESKLPHG Trigger: GCCGTGAGGGAGTTTACTTTCCTGGCCAAGAAGCCAGGCTGCAGGGGCCTTCGGATCACCACGGATGCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000314140.2 ENST00000621500.2 |
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| CDS CAA 72 bp | TCCGTGGTGATCCGAAGGCCCCTGCAGCCTGGCTTCTaGGCCAGGAAAGTAAACTCCCTCACGGCACAGCCC | + |
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Preference number: 6 (lower is better) Translates to: SVVIRRPLQPGF*ARKVNSLTAQP Trigger: GGGCTGTGCCGTGAGGGAGTTTACTTTCCTGGCCAAGAAGCCAGGCTGCAGGGGCCTTCGGATCACCACGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000314140.2 ENST00000621500.2 |
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| CDS CAA 90 bp | CAGCAGGCATCCGTGGTGATCCGAAGGCCCCTGCAGCCTGGCTTCTaGGCCAGGAAAGTAAACTCCCTCACGGCACAGCCCACAAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: QQASVVIRRPLQPGF*ARKVNSLTAQPTKV Trigger: CACCTTTGTGGGCTGTGCCGTGAGGGAGTTTACTTTCCTGGCCAAGAAGCCAGGCTGCAGGGGCCTTCGGATCACCACGGATGCCTGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000314140.2 ENST00000621500.2 |
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| CDS TCA 72 bp | AGAAGGGGTCGACTCCCGGGGCACAGTTGGGCAGCTTaGCAGTCACCTGTTTGGTCTCGTTGTAGGTACAGA | + |
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Preference number: 6 (lower is better) Translates to: RRGRLPGHSWAA*QSPVWSRCRYR Trigger: TCTGTACCTACAACGAGACCAAACAGGTGACTGTCAAGCTGCCCAACTGTGCCCCGGGAGTCGACCCCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000314140.2 ENST00000621500.2 |
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| CDS CCA 72 bp | TCCAGGAAGTATAACTGCATGTGCTGCTCACACAGGTaGGTCTGCAGAGAGCAGCTAGCGGCCTCAGATGGT | + |
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Preference number: 6 (lower is better) Translates to: SRKYNCMCCSHR*VCREQLAASDG Trigger: ACCATCTGAGGCCGCTAGCTGCTCTCTGCAGACCCACCTGTGTGAGCAGCACATGCAGTTATACTTCCTGGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621500.2 |
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