Pregenerated sensors for GPHA2 (Homo sapiens)
Ensembl gene IDs: ENSG00000149735Ensembl transcript IDs: ENST00000279168.7, ENST00000532246.1, ENST00000533257.1
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GACAGTCACAAAATCTTACAAAGGATCAAAGCTGGAACAACCCTCCCCTTATTTCCAGTTTTTGAATCTTaGACACAGGTTTCCCCCACC | + |
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Preference number: 2 (lower is better) Translates to: DSHKILQRIKAGTTLPLFPVFES*TQVSPT Trigger: GGTGGGGGAAACCTGTGTTCAAGATTCAAAAACTGG...AAATAAGGGGAGGGTTGTTCCAGCTTTGATCCTTTGTAAGATTTTGTGACTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000279168.7 |
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| 3UTR-3UTR CCA 90 bp | AAAGAGGGAAGTAAAATGATGAAAGATTGGTTTAGAAGGGCCAGGCAGAGGCAGACAAAGGATCAAAGCTaGAACAACCCTCCCCTTATT | + |
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Preference number: 2 (lower is better) Translates to: KEGSKMMKDWFRRARQRQTKDQS*NNPPLI Trigger: AATAAGGGGAGGGTTGTTCCAGCTTTGATCCTTTGT...CTGCCTCTGCCTGGCCCTTCTAAACCAATCTTTCATCATTTTACTTCCCTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000279168.7 |
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| 3UTR TCA 72 bp | CCATCAGGGCTGGAGCTCCTTCCAGTTTTTGAATCTTaGACACAGGTTTCCCCCACCAGAACGTCAAGCCCT | + |
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Preference number: 3 (lower is better) Translates to: PSGLELLPVFES*TQVSPTRTSSP Trigger: AGGGCTTGACGTTCTGGTGGGGGAAACCTGTGTTCAAGATTCAAAAACTGGAAGGAGCTCCAGCCCTGATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000279168.7 ENST00000533257.1 |
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| CDS-3UTR CCA 90 bp | ACTTTGACCTGCGGGAGAGGGGAGTCCGTGCTGCAGTCCCCTTTCTCAGGGCTGGCCACGTGGGAGCCCTaGCAGGTGCCTTGGCGGTCA | + |
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Preference number: 4 (lower is better) Translates to: TLTCGRGESVLQSPFSGLATWEP*QVPWRS Trigger: TGACCGCCAAGGCACCTGCCAGGGCTCCCACGTGGC...CAGCCCTGAGAAAGGGGACTGCAGCACGGACTCCCCTCTCCCGCAGGTCAAAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000532246.1 |
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| CDS-3UTR CCA 90 bp | ACTTTGACCTGCGGGAGAGGGGAGTCCGTGCTGCAGTCCCCTTTCTCAGGGCTGCAGGCCTGTGCCACGTaGGAGCCCTGGCAGGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: TLTCGRGESVLQSPFSGLQACAT*EPWQVP Trigger: AGGCACCTGCCAGGGCTCCCACGTGGCACAGGCCTG...CAGCCCTGAGAAAGGGGACTGCAGCACGGACTCCCCTCTCCCGCAGGTCAAAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000532246.1 |
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| CDS-3UTR GCA 90 bp | ACTTTGACCTGCGGGAGAGGGGAGTCCGTGCTGCAGTCCCCTTTCTCAGGGCTGGGGAGCCCTGGCAGGTaGCTTGGCGGTCACTTCGCA | + |
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Preference number: 4 (lower is better) Translates to: TLTCGRGESVLQSPFSGLGSPGR*LGGHFA Trigger: TGCGAAGTGACCGCCAAGGCACCTGCCAGGGCTCCC...CAGCCCTGAGAAAGGGGACTGCAGCACGGACTCCCCTCTCCCGCAGGTCAAAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000532246.1 |
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| CDS-3UTR GCA 90 bp | TGTACTTTGACCTGCGGGAGAGGGGAGTCCGTGCTGCAGTCCCCTTTCTCAGGGGCCCACACAGGCCTGTaGCACGTGGGAGCCCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: CTLTCGRGESVLQSPFSGAHTGL*HVGALA Trigger: TGCCAGGGCTCCCACGTGGCACAGGCCTGTGTGGGC...CCCTGAGAAAGGGGACTGCAGCACGGACTCCCCTCTCCCGCAGGTCAAAGTACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000532246.1 |
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| CDS-3UTR CCA 90 bp | CTGTACTTTGACCTGCGGGAGAGGGGAGTCCGTGCTGCAGTCCCCTTTCTCAGGGCGCTGGACTCACAGTaGCCCACACAGGCCTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LYFDLRERGVRAAVPFLRALDSQ*PTQACA Trigger: GGCACAGGCCTGTGTGGGCCACTGTGAGTCCAGCGC...CCTGAGAAAGGGGACTGCAGCACGGACTCCCCTCTCCCGCAGGTCAAAGTACAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000532246.1 |
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| CDS-3UTR GCA 90 bp | ATCTTGAACACAGGTTTCCCCCACCAGAACGTCAAGCCCTGTGACCCAGGGGAGGCCCACACAGGCCTGTaGCACGTGGGAGCCCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: ILNTGFPHQNVKPCDPGEAHTGL*HVGALA Trigger: TGCCAGGGCTCCCACGTGGCACAGGCCTGTGTGGGC...CTCCCCTGGGTCACAGGGCTTGACGTTCTGGTGGGGGAAACCTGTGTTCAAGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000279168.7 ENST00000533257.1 |
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| CDS-3UTR GCA 90 bp | TACTTTGACCTGCGGGAGAGGGGAGTCCGTGCTGCAGTCCCCTTTCTCAGGGCTGAGGGGAGTCCGTGCTaGAGTCCCCTTTCTCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: YFDLRERGVRAAVPFLRAEGSPC*SPLSQG Trigger: GCCCTGAGAAAGGGGACTGCAGCACGGACTCCCCTC...AGCCCTGAGAAAGGGGACTGCAGCACGGACTCCCCTCTCCCGCAGGTCAAAGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000532246.1 |
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| CDS-3UTR CCA 90 bp | ACTTTGACCTGCGGGAGAGGGGAGTCCGTGCTGCAGTCCCCTTTCTCAGGGCTGGGGATGACTGCCTCCTaGCCCCAGGCTTCAGTGACT | + |
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Preference number: 4 (lower is better) Translates to: TLTCGRGESVLQSPFSGLGMTAS*PQASVT Trigger: AGTCACTGAAGCCTGGGGCCAGGAGGCAGTCATCCC...CAGCCCTGAGAAAGGGGACTGCAGCACGGACTCCCCTCTCCCGCAGGTCAAAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000532246.1 |
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| CDS-3UTR CCA 90 bp | TGTACTTTGACCTGCGGGAGAGGGGAGTCCGTGCTGCAGTCCCCTTTCTCAGGGGTGCAAGTGGCAGCCTaGGATGACTGCCTCCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: CTLTCGRGESVLQSPFSGVQVAA*DDCLLA Trigger: GGCCAGGAGGCAGTCATCCCAGGCTGCCACTTGCAC...CCCTGAGAAAGGGGACTGCAGCACGGACTCCCCTCTCCCGCAGGTCAAAGTACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000532246.1 |
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| CDS-3UTR CCA 90 bp | ACTTTGACCTGCGGGAGAGGGGAGTCCGTGCTGCAGTCCCCTTTCTCAGGGCTGGGATCTCCATCTCTCTaGTCTTCCCGCGACCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: TLTCGRGESVLQSPFSGLGSPSL*SSRDPS Trigger: GCTGGGGTCGCGGGAAGACCAGAGAGATGGAGATCC...CAGCCCTGAGAAAGGGGACTGCAGCACGGACTCCCCTCTCCCGCAGGTCAAAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000532246.1 |
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| CDS-3UTR GCA 90 bp | TACTTTGACCTGCGGGAGAGGGGAGTCCGTGCTGCAGTCCCCTTTCTCAGGGCTGGAGAGGGGAGTCCGTaGTGCAGTCCCCTTTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: YFDLRERGVRAAVPFLRAGEGSP*CSPLSQ Trigger: CTGAGAAAGGGGACTGCAGCACGGACTCCCCTCTCC...AGCCCTGAGAAAGGGGACTGCAGCACGGACTCCCCTCTCCCGCAGGTCAAAGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000532246.1 |
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| CDS-3UTR CCA 90 bp | AACACAGGTTTCCCCCACCAGAACGTCAAGCCCTGTGACCCAGGGGAGGAAGGAGTGCAAGTGGCAGCCTaGGATGACTGCCTCCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: NTGFPHQNVKPCDPGEEGVQVAA*DDCLLA Trigger: GGCCAGGAGGCAGTCATCCCAGGCTGCCACTTGCAC...TCCTTCCTCCCCTGGGTCACAGGGCTTGACGTTCTGGTGGGGGAAACCTGTGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000279168.7 ENST00000533257.1 |
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| CDS-3UTR CCA 90 bp | CTGTACTTTGACCTGCGGGAGAGGGGAGTCCGTGCTGCAGTCCCCTTTCTCAGGGAGAAGGGAAGGCGCTaGACTCACAGTGGCCCACAC | + |
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Preference number: 4 (lower is better) Translates to: LYFDLRERGVRAAVPFLREKGRR*THSGPH Trigger: GTGTGGGCCACTGTGAGTCCAGCGCCTTCCCTTCTC...CCTGAGAAAGGGGACTGCAGCACGGACTCCCCTCTCCCGCAGGTCAAAGTACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000532246.1 |
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| CDS-3UTR CCA 90 bp | AACACAGGTTTCCCCCACCAGAACGTCAAGCCCTGTGACCCAGGGGAGGAAGGAGGGATGACTGCCTCCTaGCCCCAGGCTTCAGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: NTGFPHQNVKPCDPGEEGGMTAS*PQASVT Trigger: AGTCACTGAAGCCTGGGGCCAGGAGGCAGTCATCCC...TCCTTCCTCCCCTGGGTCACAGGGCTTGACGTTCTGGTGGGGGAAACCTGTGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000279168.7 ENST00000533257.1 |
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| CDS-3UTR CCA 90 bp | CTGTACTTTGACCTGCGGGAGAGGGGAGTCCGTGCTGCAGTCCCCTTTCTCAGGTTGAAGGGGTGCAAGTaGCAGCCTGGGATGACTGCC | + |
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Preference number: 4 (lower is better) Translates to: LYFDLRERGVRAAVPFLRLKGCK*QPGMTA Trigger: GGCAGTCATCCCAGGCTGCCACTTGCACCCCTTCAA...CCTGAGAAAGGGGACTGCAGCACGGACTCCCCTCTCCCGCAGGTCAAAGTACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000532246.1 |
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| CDS-3UTR TCA 90 bp | ACTTTGACCTGCGGGAGAGGGGAGTCCGTGCTGCAGTCCCCTTTCTCAGGGCTGACTGAGAGACGGAGGTaGTGTTGTGTCGGTAACCAC | + |
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Preference number: 4 (lower is better) Translates to: TLTCGRGESVLQSPFSGLTERRR*CCVGNH Trigger: GTGGTTACCGACACAACATCACCTCCGTCTCTCAGT...CAGCCCTGAGAAAGGGGACTGCAGCACGGACTCCCCTCTCCCGCAGGTCAAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000532246.1 |
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| CDS-3UTR TCA 90 bp | TGTACTTTGACCTGCGGGAGAGGGGAGTCCGTGCTGCAGTCCCCTTTCTCAGGGCTGATGGTGCAGCACTaGGAGACGGAGGTGATGTTG | + |
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Preference number: 4 (lower is better) Translates to: CTLTCGRGESVLQSPFSGLMVQH*ETEVML Trigger: CAACATCACCTCCGTCTCTCAGTGCTGCACCATCAG...CCCTGAGAAAGGGGACTGCAGCACGGACTCCCCTCTCCCGCAGGTCAAAGTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000532246.1 |
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| CDS-3UTR GCA 90 bp | TACTTTGACCTGCGGGAGAGGGGAGTCCGTGCTGCAGTCCCCTTTCTCAGGGCTCCAGGCTTCAGTGACTaGCAGGACCAGCAGATAGAG | + |
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Preference number: 4 (lower is better) Translates to: YFDLRERGVRAAVPFLRAPGFSD*QDQQIE Trigger: CTCTATCTGCTGGTCCTGGCAGTCACTGAAGCCTGG...AGCCCTGAGAAAGGGGACTGCAGCACGGACTCCCCTCTCCCGCAGGTCAAAGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000532246.1 |
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| CDS-3UTR CCA 90 bp | TTGAACACAGGTTTCCCCCACCAGAACGTCAAGCCCTGTGACCCAGGGGAGGAAGAGAAGGGAAGGCGCTaGACTCACAGTGGCCCACAC | + |
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Preference number: 4 (lower is better) Translates to: LNTGFPHQNVKPCDPGEEEKGRR*THSGPH Trigger: GTGTGGGCCACTGTGAGTCCAGCGCCTTCCCTTCTC...TTCCTCCCCTGGGTCACAGGGCTTGACGTTCTGGTGGGGGAAACCTGTGTTCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000279168.7 ENST00000533257.1 |
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| CDS-3UTR CCA 90 bp | CATCAGGGCTGGAGCTCCTTCCAGTTTTTGAATCTTGAACACAGGTTTCCCCCAGCCACGTGGGAGCCCTaGCAGGTGCCTTGGCGGTCA | + |
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Preference number: 4 (lower is better) Translates to: HQGWSSFQFLNLEHRFPPATWEP*QVPWRS Trigger: TGACCGCCAAGGCACCTGCCAGGGCTCCCACGTGGC...TGGGGGAAACCTGTGTTCAAGATTCAAAAACTGGAAGGAGCTCCAGCCCTGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000279168.7 ENST00000533257.1 |
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| CDS-3UTR TCA 90 bp | AACCATCAGGGCTGGAGCTCCTTCCAGTTTTTGAATCTTGAACACAGGTTTCCCGGCAGGCCCTGGCCGTaGAGATCTCGAGCTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: NHQGWSSFQFLNLEHRFPGRPWP*RSRAPP Trigger: GGGAGGAGCTCGAGATCTTCACGGCCAGGGCCTGCC...GGGAAACCTGTGTTCAAGATTCAAAAACTGGAAGGAGCTCCAGCCCTGATGGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000279168.7 ENST00000533257.1 |
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| CDS-3UTR GCA 90 bp | TTGAACACAGGTTTCCCCCACCAGAACGTCAAGCCCTGTGACCCAGGGGAGGAACCAGGCTTCAGTGACTaGCAGGACCAGCAGATAGAG | + |
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Preference number: 4 (lower is better) Translates to: LNTGFPHQNVKPCDPGEEPGFSD*QDQQIE Trigger: CTCTATCTGCTGGTCCTGGCAGTCACTGAAGCCTGG...TTCCTCCCCTGGGTCACAGGGCTTGACGTTCTGGTGGGGGAAACCTGTGTTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000279168.7 ENST00000533257.1 |
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| CDS-3UTR CCA 90 bp | AACCATCAGGGCTGGAGCTCCTTCCAGTTTTTGAATCTTGAACACAGGTTTCCCCAGGCCTGTGCCACGTaGGAGCCCTGGCAGGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: NHQGWSSFQFLNLEHRFPQACAT*EPWQVP Trigger: AGGCACCTGCCAGGGCTCCCACGTGGCACAGGCCTG...GGGAAACCTGTGTTCAAGATTCAAAAACTGGAAGGAGCTCCAGCCCTGATGGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000279168.7 ENST00000533257.1 |
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| CDS-3UTR CCA 90 bp | CATCAGGGCTGGAGCTCCTTCCAGTTTTTGAATCTTGAACACAGGTTTCCCCCAGCGCTGGACTCACAGTaGCCCACACAGGCCTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: HQGWSSFQFLNLEHRFPPALDSQ*PTQACA Trigger: GGCACAGGCCTGTGTGGGCCACTGTGAGTCCAGCGC...TGGGGGAAACCTGTGTTCAAGATTCAAAAACTGGAAGGAGCTCCAGCCCTGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000279168.7 ENST00000533257.1 |
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| CDS-3UTR GCA 90 bp | AGCTCCTTCCAGTTTTTGAATCTTGAACACAGGTTTCCCCCACCAGAACGTCAAGCCCACACAGGCCTGTaGCACGTGGGAGCCCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: SSFQFLNLEHRFPPPERQAHTGL*HVGALA Trigger: TGCCAGGGCTCCCACGTGGCACAGGCCTGTGTGGGC...TTGACGTTCTGGTGGGGGAAACCTGTGTTCAAGATTCAAAAACTGGAAGGAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000279168.7 ENST00000533257.1 |
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| CDS-3UTR CCA 90 bp | AGCTCCTTCCAGTTTTTGAATCTTGAACACAGGTTTCCCCCACCAGAACGTCAAGCCACGTGGGAGCCCTaGCAGGTGCCTTGGCGGTCA | + |
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Preference number: 4 (lower is better) Translates to: SSFQFLNLEHRFPPPERQATWEP*QVPWRS Trigger: TGACCGCCAAGGCACCTGCCAGGGCTCCCACGTGGC...TTGACGTTCTGGTGGGGGAAACCTGTGTTCAAGATTCAAAAACTGGAAGGAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000279168.7 ENST00000533257.1 |
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| CDS-3UTR TCA 90 bp | ATAGCAAGTAACCATCAGGGCTGGAGCTCCTTCCAGTTTTTGAATCTTGAACACGGCAGGCCCTGGCCGTaGAGATCTCGAGCTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: IASNHQGWSSFQFLNLEHGRPWP*RSRAPP Trigger: GGGAGGAGCTCGAGATCTTCACGGCCAGGGCCTGCC...GTGTTCAAGATTCAAAAACTGGAAGGAGCTCCAGCCCTGATGGTTACTTGCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000279168.7 ENST00000533257.1 |
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| CDS-3UTR GCA 90 bp | AGCTCCTTCCAGTTTTTGAATCTTGAACACAGGTTTCCCCCACCAGAACGTCAAGGGAGCCCTGGCAGGTaGCTTGGCGGTCACTTCGCA | + |
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Preference number: 4 (lower is better) Translates to: SSFQFLNLEHRFPPPERQGSPGR*LGGHFA Trigger: TGCGAAGTGACCGCCAAGGCACCTGCCAGGGCTCCC...TTGACGTTCTGGTGGGGGAAACCTGTGTTCAAGATTCAAAAACTGGAAGGAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000279168.7 ENST00000533257.1 |
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| CDS-3UTR CCA 90 bp | CAGGGCTGGAGCTCCTTCCAGTTTTTGAATCTTGAACACAGGTTTCCCCCACCAGGAGATGTCTCTACGTaGGTGTGCAGGTGGGATGGC | + |
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Preference number: 4 (lower is better) Translates to: QGWSSFQFLNLEHRFPPPGDVST*VCRWDG Trigger: GCCATCCCACCTGCACACCCACGTAGAGACATCTCC...TGGTGGGGGAAACCTGTGTTCAAGATTCAAAAACTGGAAGGAGCTCCAGCCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000533257.1 |
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| CDS-3UTR GCA 90 bp | AAAGAGGGAAGTAAAATGATGAAAGATTGGTTTAGAAGGGCCAGGCAGAGGCAGGGGAGCCCTGGCAGGTaGCTTGGCGGTCACTTCGCA | + |
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Preference number: 4 (lower is better) Translates to: KEGSKMMKDWFRRARQRQGSPGR*LGGHFA Trigger: TGCGAAGTGACCGCCAAGGCACCTGCCAGGGCTCCC...CTGCCTCTGCCTGGCCCTTCTAAACCAATCTTTCATCATTTTACTTCCCTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000279168.7 |
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| CDS-3UTR GCA 90 bp | CATCAGGGCTGGAGCTCCTTCCAGTTTTTGAATCTTGAACACAGGTTTCCCCCAGTCTCTACGTGGGTGTaGAGGTGGGATGGCGAGTTC | + |
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Preference number: 4 (lower is better) Translates to: HQGWSSFQFLNLEHRFPPVSTWV*RWDGEF Trigger: GAACTCGCCATCCCACCTGCACACCCACGTAGAGAC...TGGGGGAAACCTGTGTTCAAGATTCAAAAACTGGAAGGAGCTCCAGCCCTGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000533257.1 |
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| CDS-3UTR CCA 90 bp | TCCTTCCAGTTTTTGAATCTTGAACACAGGTTTCCCCCACCAGAACGTCAAGCCCGACACATGTCACACTaGCAGGCCCTGGCCGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: SFQFLNLEHRFPPPERQARHMSH*QALAVK Trigger: CTTCACGGCCAGGGCCTGCCAGTGTGACATGTGTCG...GGCTTGACGTTCTGGTGGGGGAAACCTGTGTTCAAGATTCAAAAACTGGAAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000279168.7 ENST00000533257.1 |
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| CDS-3UTR CCA 90 bp | AACCATCAGGGCTGGAGCTCCTTCCAGTTTTTGAATCTTGAACACAGGTTTCCCCGACACATGTCACACTaGCAGGCCCTGGCCGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: NHQGWSSFQFLNLEHRFPRHMSH*QALAVK Trigger: CTTCACGGCCAGGGCCTGCCAGTGTGACATGTGTCG...GGGAAACCTGTGTTCAAGATTCAAAAACTGGAAGGAGCTCCAGCCCTGATGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000279168.7 ENST00000533257.1 |
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| CDS-3UTR TCA 90 bp | CAGGGCTGGAGCTCCTTCCAGTTTTTGAATCTTGAACACAGGTTTCCCCCACCAACTGAGAGACGGAGGTaGTGTTGTGTCGGTAACCAC | + |
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Preference number: 4 (lower is better) Translates to: QGWSSFQFLNLEHRFPPPTERRR*CCVGNH Trigger: GTGGTTACCGACACAACATCACCTCCGTCTCTCAGT...TGGTGGGGGAAACCTGTGTTCAAGATTCAAAAACTGGAAGGAGCTCCAGCCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000279168.7 ENST00000533257.1 |
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| CDS-3UTR TCA 90 bp | ATCTTGAACACAGGTTTCCCCCACCAGAACGTCAAGCCCTGTGACCCAGGGGAGTCCCCTCTTCTCAGGTaGCAGTCACAAAATCTTACA | + |
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Preference number: 4 (lower is better) Translates to: ILNTGFPHQNVKPCDPGESPLLR*QSQNLT Trigger: TGTAAGATTTTGTGACTGTCACCTGAGAAGAGGGGA...CTCCCCTGGGTCACAGGGCTTGACGTTCTGGTGGGGGAAACCTGTGTTCAAGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000279168.7 |
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| CDS-3UTR CCA 90 bp | TCCTTCCAGTTTTTGAATCTTGAACACAGGTTTCCCCCACCAGAACGTCAAGCCTTGAAGGGGTGCAAGTaGCAGCCTGGGATGACTGCC | + |
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Preference number: 4 (lower is better) Translates to: SFQFLNLEHRFPPPERQALKGCK*QPGMTA Trigger: GGCAGTCATCCCAGGCTGCCACTTGCACCCCTTCAA...GGCTTGACGTTCTGGTGGGGGAAACCTGTGTTCAAGATTCAAAAACTGGAAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000279168.7 ENST00000533257.1 |
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| CDS-3UTR GCA 90 bp | TCCTTCCAGTTTTTGAATCTTGAACACAGGTTTCCCCCACCAGAACGTCAAGCCCCAGGCTTCAGTGACTaGCAGGACCAGCAGATAGAG | + |
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Preference number: 4 (lower is better) Translates to: SFQFLNLEHRFPPPERQAPGFSD*QDQQIE Trigger: CTCTATCTGCTGGTCCTGGCAGTCACTGAAGCCTGG...GGCTTGACGTTCTGGTGGGGGAAACCTGTGTTCAAGATTCAAAAACTGGAAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000279168.7 ENST00000533257.1 |
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| CDS-3UTR CCA 90 bp | AAAGAGGGAAGTAAAATGATGAAAGATTGGTTTAGAAGGGCCAGGCAGAGGCAGGGGATGACTGCCTCCTaGCCCCAGGCTTCAGTGACT | + |
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Preference number: 4 (lower is better) Translates to: KEGSKMMKDWFRRARQRQGMTAS*PQASVT Trigger: AGTCACTGAAGCCTGGGGCCAGGAGGCAGTCATCCC...CTGCCTCTGCCTGGCCCTTCTAAACCAATCTTTCATCATTTTACTTCCCTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000279168.7 |
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| CDS-3UTR CCA 90 bp | GACAGTCACAAAATCTTACAAAGGATCAAAGCTGGAACAACCCTCCCCTTATTTGCGCTGGACTCACAGTaGCCCACACAGGCCTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: DSHKILQRIKAGTTLPLFALDSQ*PTQACA Trigger: GGCACAGGCCTGTGTGGGCCACTGTGAGTCCAGCGC...AAATAAGGGGAGGGTTGTTCCAGCTTTGATCCTTTGTAAGATTTTGTGACTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000279168.7 |
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| CDS-3UTR CCA 90 bp | ATAGCAAGTAACCATCAGGGCTGGAGCTCCTTCCAGTTTTTGAATCTTGAACACGAGAAGGGAAGGCGCTaGACTCACAGTGGCCCACAC | + |
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Preference number: 4 (lower is better) Translates to: IASNHQGWSSFQFLNLEHEKGRR*THSGPH Trigger: GTGTGGGCCACTGTGAGTCCAGCGCCTTCCCTTCTC...GTGTTCAAGATTCAAAAACTGGAAGGAGCTCCAGCCCTGATGGTTACTTGCTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000279168.7 ENST00000533257.1 |
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| CDS-3UTR CCA 90 bp | CAGGGCTGGAGCTCCTTCCAGTTTTTGAATCTTGAACACAGGTTTCCCCCACCAACGTGGGTGTGCAGGTaGGATGGCGAGTTCTTTAAA | + |
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Preference number: 4 (lower is better) Translates to: QGWSSFQFLNLEHRFPPPTWVCR*DGEFFK Trigger: TTTAAAGAACTCGCCATCCCACCTGCACACCCACGT...TGGTGGGGGAAACCTGTGTTCAAGATTCAAAAACTGGAAGGAGCTCCAGCCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000533257.1 |
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| CDS-3UTR CCA 90 bp | CAGGGCTGGAGCTCCTTCCAGTTTTTGAATCTTGAACACAGGTTTCCCCCACCAGCATCTGAAACACAGTaGGGAGATGTCTCTACGTGG | + |
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Preference number: 4 (lower is better) Translates to: QGWSSFQFLNLEHRFPPPASETQ*GDVSTW Trigger: CCACGTAGAGACATCTCCCCACTGTGTTTCAGATGC...TGGTGGGGGAAACCTGTGTTCAAGATTCAAAAACTGGAAGGAGCTCCAGCCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000533257.1 |
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| CDS-3UTR TCA 90 bp | TCCTTCCAGTTTTTGAATCTTGAACACAGGTTTCCCCCACCAGAACGTCAAGCCACTGAGAGACGGAGGTaGTGTTGTGTCGGTAACCAC | + |
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Preference number: 4 (lower is better) Translates to: SFQFLNLEHRFPPPERQATERRR*CCVGNH Trigger: GTGGTTACCGACACAACATCACCTCCGTCTCTCAGT...GGCTTGACGTTCTGGTGGGGGAAACCTGTGTTCAAGATTCAAAAACTGGAAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000279168.7 ENST00000533257.1 |
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| CDS-3UTR GCA 90 bp | AGCTCCTTCCAGTTTTTGAATCTTGAACACAGGTTTCCCCCACCAGAACGTCAAGTCACATTGAAGGGGTaGAAGTGGCAGCCTGGGATG | + |
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Preference number: 4 (lower is better) Translates to: SSFQFLNLEHRFPPPERQVTLKG*KWQPGM Trigger: CATCCCAGGCTGCCACTTGCACCCCTTCAATGTGAC...TTGACGTTCTGGTGGGGGAAACCTGTGTTCAAGATTCAAAAACTGGAAGGAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000279168.7 ENST00000533257.1 |
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| CDS-3UTR CCA 90 bp | ATAGCAAGTAACCATCAGGGCTGGAGCTCCTTCCAGTTTTTGAATCTTGAACACTTGAAGGGGTGCAAGTaGCAGCCTGGGATGACTGCC | + |
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Preference number: 4 (lower is better) Translates to: IASNHQGWSSFQFLNLEHLKGCK*QPGMTA Trigger: GGCAGTCATCCCAGGCTGCCACTTGCACCCCTTCAA...GTGTTCAAGATTCAAAAACTGGAAGGAGCTCCAGCCCTGATGGTTACTTGCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000279168.7 ENST00000533257.1 |
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| CDS-3UTR TCA 90 bp | AAAGAGGGAAGTAAAATGATGAAAGATTGGTTTAGAAGGGCCAGGCAGAGGCAGCTGATGGTGCAGCACTaGGAGACGGAGGTGATGTTG | + |
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Preference number: 4 (lower is better) Translates to: KEGSKMMKDWFRRARQRQLMVQH*ETEVML Trigger: CAACATCACCTCCGTCTCTCAGTGCTGCACCATCAG...CTGCCTCTGCCTGGCCCTTCTAAACCAATCTTTCATCATTTTACTTCCCTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279168.7 |
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| CDS-3UTR GCA 90 bp | AAAGAGGGAAGTAAAATGATGAAAGATTGGTTTAGAAGGGCCAGGCAGAGGCAGCGGCTCCCCACACACTaGAGCTGTACTTTGACCTTC | + |
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Preference number: 4 (lower is better) Translates to: KEGSKMMKDWFRRARQRQRLPTH*SCTLTF Trigger: GAAGGTCAAAGTACAGCTGCAGTGTGTGGGGAGCCG...CTGCCTCTGCCTGGCCCTTCTAAACCAATCTTTCATCATTTTACTTCCCTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000279168.7 |
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| CDS-3UTR GCA 90 bp | AGTAACCATCAGGGCTGGAGCTCCTTCCAGTTTTTGAATCTTGAACACAGGTTTCGGCTCCCCACACACTaGAGCTGTACTTTGACCTTC | + |
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Preference number: 4 (lower is better) Translates to: SNHQGWSSFQFLNLEHRFRLPTH*SCTLTF Trigger: GAAGGTCAAAGTACAGCTGCAGTGTGTGGGGAGCCG...AAACCTGTGTTCAAGATTCAAAAACTGGAAGGAGCTCCAGCCCTGATGGTTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000279168.7 ENST00000533257.1 |
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| CDS-3UTR TCA 90 bp | AACCATCAGGGCTGGAGCTCCTTCCAGTTTTTGAATCTTGAACACAGGTTTCCCCCAGTTTTTGAATCTTaGACACAGGTTTCCCCCACC | + |
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Preference number: 4 (lower is better) Translates to: NHQGWSSFQFLNLEHRFPPVFES*TQVSPT Trigger: GGTGGGGGAAACCTGTGTTCAAGATTCAAAAACTGG...GGGAAACCTGTGTTCAAGATTCAAAAACTGGAAGGAGCTCCAGCCCTGATGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENST00000279168.7 ENST00000533257.1 |
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| CDS-3UTR GCA 90 bp | AAAGAGGGAAGTAAAATGATGAAAGATTGGTTTAGAAGGGCCAGGCAGAGGCAGAGGAACAGAGCGGCTTaGAGTTTTCCTGTGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: KEGSKMMKDWFRRARQRQRNRAA*SFPVPP Trigger: AGGAGGCACAGGAAAACTGCAAGCCGCTCTGTTCCT...CTGCCTCTGCCTGGCCCTTCTAAACCAATCTTTCATCATTTTACTTCCCTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000279168.7 |
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| CDS-3UTR CCA 90 bp | ATAGCAAGTAACCATCAGGGCTGGAGCTCCTTCCAGTTTTTGAATCTTGAACACAGTAACCATCAGGGCTaGAGCTCCTTCCAGTTTTTG | + |
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Preference number: 4 (lower is better) Translates to: IASNHQGWSSFQFLNLEHSNHQG*SSFQFL Trigger: CAAAAACTGGAAGGAGCTCCAGCCCTGATGGTTACT...GTGTTCAAGATTCAAAAACTGGAAGGAGCTCCAGCCCTGATGGTTACTTGCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000279168.7 ENST00000533257.1 |
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| CDS-3UTR CCA 90 bp | AGCTCCTTCCAGTTTTTGAATCTTGAACACAGGTTTCCCCCACCAGAACGTCAAACAAAGGATCAAAGCTaGAACAACCCTCCCCTTATT | + |
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Preference number: 4 (lower is better) Translates to: SSFQFLNLEHRFPPPERQTKDQS*NNPPLI Trigger: AATAAGGGGAGGGTTGTTCCAGCTTTGATCCTTTGT...TTGACGTTCTGGTGGGGGAAACCTGTGTTCAAGATTCAAAAACTGGAAGGAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000279168.7 |
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| CDS GCA 90 bp | CCGAGAAGGGAAGGCGCTGGACTCACAGTGGCCCACACAGGCCTGTaGCACGTGGGAGCCCTGGCAGGTGCCTTGGCGGTCACTTCGCAC | + |
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Preference number: 5 (lower is better) Translates to: PRREGAGLTVAHTGL*HVGALAGALAVTSH Trigger: GTGCGAAGTGACCGCCAAGGCACCTGCCAGGGCTCCCACGTGGCACAGGCCTGTGTGGGCCACTGTGAGTCCAGCGCCTTCCCTTCTCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000279168.7 ENST00000532246.1 ENST00000533257.1 |
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| CDS CCA 90 bp | GGTAACCACTGGCCACCAGCACAGAGTACCGAGAAGGGAAGGCGCTaGACTCACAGTGGCCCACACAGGCCTGTGCCACGTGGGAGCCCT | + |
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Preference number: 5 (lower is better) Translates to: GNHWPPAQSTEKGRR*THSGPHRPVPRGSP Trigger: AGGGCTCCCACGTGGCACAGGCCTGTGTGGGCCACTGTGAGTCCAGCGCCTTCCCTTCTCGGTACTCTGTGCTGGTGGCCAGTGGTTACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000279168.7 ENST00000532246.1 ENST00000533257.1 |
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| CDS TCA 90 bp | AGTAGCGAGAGAGGCGACACATGTCACACTGGCAGGCCCTGGCCGTaGAGATCTCGAGCTCCTCCCTCCGGCTCCCCACACACTGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: SSERGDTCHTGRPWP*RSRAPPSGSPHTAA Trigger: AGCTGCAGTGTGTGGGGAGCCGGAGGGAGGAGCTCGAGATCTTCACGGCCAGGGCCTGCCAGTGTGACATGTGTCGCCTCTCTCGCTACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000279168.7 ENST00000533257.1 |
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| CDS-3UTR CAA 90 bp | CTGTACTTTGACCTGCGGGAGAGGGGAGTCCGTGCTGCAGTCCCCTTTCTCAGGCAGGAACAGAGCGGCTaGCAGTTTTCCTGTGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: LYFDLRERGVRAAVPFLRQEQSG*QFSCAS Trigger: GGAGGCACAGGAAAACTGCAAGCCGCTCTGTTCCTG...CCTGAGAAAGGGGACTGCAGCACGGACTCCCCTCTCCCGCAGGTCAAAGTACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000532246.1 |
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| CDS-3UTR CAA 90 bp | ACTTTGACCTGCGGGAGAGGGGAGTCCGTGCTGCAGTCCCCTTTCTCAGGGCTGATAGAGGACCAGGGTTaGAGGGGACGCCATAGGCAT | + |
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Preference number: 5 (lower is better) Translates to: TLTCGRGESVLQSPFSGLIEDQG*RGRHRH Trigger: ATGCCTATGGCGTCCCCTCAAACCCTGGTCCTCTAT...CAGCCCTGAGAAAGGGGACTGCAGCACGGACTCCCCTCTCCCGCAGGTCAAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000532246.1 |
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| CDS-3UTR CAA 90 bp | TACTTTGACCTGCGGGAGAGGGGAGTCCGTGCTGCAGTCCCCTTTCTCAGGGCTCTTCGCACTGTCACATaGAAGGGGTGCAAGTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: YFDLRERGVRAAVPFLRALRTVT*KGCKWQ Trigger: CTGCCACTTGCACCCCTTCAATGTGACAGTGCGAAG...AGCCCTGAGAAAGGGGACTGCAGCACGGACTCCCCTCTCCCGCAGGTCAAAGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000532246.1 |
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| CDS-3UTR CAA 90 bp | CATCAGGGCTGGAGCTCCTTCCAGTTTTTGAATCTTGAACACAGGTTTCCCCCACTTCGCACTGTCACATaGAAGGGGTGCAAGTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: HQGWSSFQFLNLEHRFPPLRTVT*KGCKWQ Trigger: CTGCCACTTGCACCCCTTCAATGTGACAGTGCGAAG...TGGGGGAAACCTGTGTTCAAGATTCAAAAACTGGAAGGAGCTCCAGCCCTGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000279168.7 ENST00000533257.1 |
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| CDS-3UTR CAA 90 bp | CATCAGGGCTGGAGCTCCTTCCAGTTTTTGAATCTTGAACACAGGTTTCCCCCACACTGCAGCTGTACTTaGACCTTCTTCAGGCCACTG | + |
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Preference number: 5 (lower is better) Translates to: HQGWSSFQFLNLEHRFPPHCSCT*TFFRPL Trigger: CAGTGGCCTGAAGAAGGTCAAAGTACAGCTGCAGTG...TGGGGGAAACCTGTGTTCAAGATTCAAAAACTGGAAGGAGCTCCAGCCCTGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000279168.7 ENST00000533257.1 |
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| CDS-3UTR CAA 90 bp | ATAGCAAGTAACCATCAGGGCTGGAGCTCCTTCCAGTTTTTGAATCTTGAACACCAGGAACAGAGCGGCTaGCAGTTTTCCTGTGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: IASNHQGWSSFQFLNLEHQEQSG*QFSCAS Trigger: GGAGGCACAGGAAAACTGCAAGCCGCTCTGTTCCTG...GTGTTCAAGATTCAAAAACTGGAAGGAGCTCCAGCCCTGATGGTTACTTGCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000279168.7 |
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| CDS-3UTR CAA 90 bp | AAAGAGGGAAGTAAAATGATGAAAGATTGGTTTAGAAGGGCCAGGCAGAGGCAGATAGAGGACCAGGGTTaGAGGGGACGCCATAGGCAT | + |
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Preference number: 5 (lower is better) Translates to: KEGSKMMKDWFRRARQRQIEDQG*RGRHRH Trigger: ATGCCTATGGCGTCCCCTCAAACCCTGGTCCTCTAT...CTGCCTCTGCCTGGCCCTTCTAAACCAATCTTTCATCATTTTACTTCCCTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000279168.7 |
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| CDS-3UTR CAA 90 bp | AGTAACCATCAGGGCTGGAGCTCCTTCCAGTTTTTGAATCTTGAACACAGGTTTATAGAGGACCAGGGTTaGAGGGGACGCCATAGGCAT | + |
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Preference number: 5 (lower is better) Translates to: SNHQGWSSFQFLNLEHRFIEDQG*RGRHRH Trigger: ATGCCTATGGCGTCCCCTCAAACCCTGGTCCTCTAT...AAACCTGTGTTCAAGATTCAAAAACTGGAAGGAGCTCCAGCCCTGATGGTTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000279168.7 ENST00000533257.1 |
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| CDS-3UTR CAA 90 bp | ATAGCAAGTAACCATCAGGGCTGGAGCTCCTTCCAGTTTTTGAATCTTGAACACCTTCGCACTGTCACATaGAAGGGGTGCAAGTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: IASNHQGWSSFQFLNLEHLRTVT*KGCKWQ Trigger: CTGCCACTTGCACCCCTTCAATGTGACAGTGCGAAG...GTGTTCAAGATTCAAAAACTGGAAGGAGCTCCAGCCCTGATGGTTACTTGCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000279168.7 ENST00000533257.1 |
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| CDS-3UTR CAA 90 bp | ATAGCAAGTAACCATCAGGGCTGGAGCTCCTTCCAGTTTTTGAATCTTGAACACCACTGCAGCTGTACTTaGACCTTCTTCAGGCCACTG | + |
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Preference number: 5 (lower is better) Translates to: IASNHQGWSSFQFLNLEHHCSCT*TFFRPL Trigger: CAGTGGCCTGAAGAAGGTCAAAGTACAGCTGCAGTG...GTGTTCAAGATTCAAAAACTGGAAGGAGCTCCAGCCCTGATGGTTACTTGCTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000279168.7 ENST00000533257.1 |
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| CDS GCA 72 bp | GAAGGCGCTGGACTCACAGTGGCCCACACAGGCCTGTaGCACGTGGGAGCCCTGGCAGGTGCCTTGGCGGTC | + |
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Preference number: 6 (lower is better) Translates to: EGAGLTVAHTGL*HVGALAGALAV Trigger: GACCGCCAAGGCACCTGCCAGGGCTCCCACGTGGCACAGGCCTGTGTGGGCCACTGTGAGTCCAGCGCCTTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000279168.7 ENST00000532246.1 ENST00000533257.1 |
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| CDS CCA 72 bp | CTGGACTCACAGTGGCCCACACAGGCCTGTGCCACGTaGGAGCCCTGGCAGGTGCCTTGGCGGTCACTTCGC | + |
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Preference number: 6 (lower is better) Translates to: LDSQWPTQACAT*EPWQVPWRSLR Trigger: GCGAAGTGACCGCCAAGGCACCTGCCAGGGCTCCCACGTGGCACAGGCCTGTGTGGGCCACTGTGAGTCCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000279168.7 ENST00000532246.1 ENST00000533257.1 |
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| CDS TCA 72 bp | AGAGGCGACACATGTCACACTGGCAGGCCCTGGCCGTaGAGATCTCGAGCTCCTCCCTCCGGCTCCCCACAC | + |
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Preference number: 6 (lower is better) Translates to: RGDTCHTGRPWP*RSRAPPSGSPH Trigger: GTGTGGGGAGCCGGAGGGAGGAGCTCGAGATCTTCACGGCCAGGGCCTGCCAGTGTGACATGTGTCGCCTCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000279168.7 ENST00000533257.1 |
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| CDS CCA 72 bp | ACAGAGTACCGAGAAGGGAAGGCGCTGGACTCACAGTaGCCCACACAGGCCTGTGCCACGTGGGAGCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: TEYREGKALDSQ*PTQACATWEPW Trigger: CCAGGGCTCCCACGTGGCACAGGCCTGTGTGGGCCACTGTGAGTCCAGCGCCTTCCCTTCTCGGTACTCTGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000279168.7 ENST00000532246.1 ENST00000533257.1 |
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| CDS CAA 90 bp | GTGGCCCACACAGGCCTGTGCCACGTGGGAGCCCTGGCAGGTGCCTaGGCGGTCACTTCGCACTGTCACATTGAAGGGGTGCAAGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: VAHTGLCHVGALAGA*AVTSHCHIEGVQVA Trigger: TGCCACTTGCACCCCTTCAATGTGACAGTGCGAAGTGACCGCCAAGGCACCTGCCAGGGCTCCCACGTGGCACAGGCCTGTGTGGGCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000279168.7 ENST00000532246.1 ENST00000533257.1 |
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| CDS CCA 72 bp | TGGCCACCAGCACAGAGTACCGAGAAGGGAAGGCGCTaGACTCACAGTGGCCCACACAGGCCTGTGCCACGT | + |
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Preference number: 6 (lower is better) Translates to: WPPAQSTEKGRR*THSGPHRPVPR Trigger: ACGTGGCACAGGCCTGTGTGGGCCACTGTGAGTCCAGCGCCTTCCCTTCTCGGTACTCTGTGCTGGTGGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000279168.7 ENST00000532246.1 ENST00000533257.1 |
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