RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPER1 (Homo sapiens)

Ensembl gene IDs: ENSG00000164850

Ensembl transcript IDs: ENST00000297469.3, ENST00000397088.4, ENST00000397092.5, ENST00000401670.1, ENST00000413368.5, ENST00000617001.1, ENST00000619052.1

Found 668 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACCCCGGAGCAGACGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTaGTCCGGGCCGAGCGCTGCTGCTCCTCGTGGGCCTGGTGAGGCC +
Preference number: 1 (lower is better)
Translates to: HPGADGGRSTEGPSC*SGPSAAAPRGPGEA
Trigger: GGCCTCACCAGGCCCACGAGGAGCAGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCGTCTGCTCCGGGGTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
3UTR GCA 90 bp AACCACCCCGGAGCAGACGGCGGGCGCTCCACAGAGGGGCCTTCCTaGTGCTCCGGGCCGAGCGCTGCTGCTCCTCGTGGGCCTGGTGAG +
Preference number: 1 (lower is better)
Translates to: NHPGADGGRSTEGPS*CSGPSAAAPRGPGE
Trigger: CTCACCAGGCCCACGAGGAGCAGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCGTCTGCTCCGGGGTGGTT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
3UTR CCA 90 bp GTGCAGCGGCAGGCAGGGTTGGCGGGGAGGAGCTGGGTGACAGGCTaGTCACCGCTGGCCTTTGGACCCTGCGGGGCGAGCGCTTTGGGA +
Preference number: 1 (lower is better)
Translates to: VQRQAGLAGRSWVTG*SPLAFGPCGASALG
Trigger: TCCCAAAGCGCTCGCCCCGCAGGGTCCAAAGGCCAGCGGTGACCAGCCTGTCACCCAGCTCCTCCCCGCCAACCCTGCCTGCCGCTGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR TCA 90 bp TTCCTGCTGCTCCGGGCCGAGCGCTGCTGCTCCTCGTGGGCCTGGTaGGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGAC +
Preference number: 1 (lower is better)
Translates to: FLLLRAERCCSSWAW*GRTAPLLPSWKMED
Trigger: GTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGCGCTCGGCCCGGAGCAGCAGGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
3UTR GCA 90 bp GCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTGCTaGCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAG +
Preference number: 1 (lower is better)
Translates to: AAAPRGPGEAAQRHC*HPGRWRTLRRAPEQ
Trigger: CTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
3UTR GCA 90 bp AGCGCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTaGTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAG +
Preference number: 1 (lower is better)
Translates to: SAAAPRGPGEAAQRH*CHPGRWRTLRRAPE
Trigger: CTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGCGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
3UTR TCA 90 bp GGCCCCGAGGAGCCAGAAGCCACATCTGACCGCAGTTTAGAGACATaGCGTGGCCGTGCCTTGTGTCCACCCAGGTGTGTGCAGCTCCCG +
Preference number: 1 (lower is better)
Translates to: GPEEPEATSDRSLET*RGRALCPPRCVQLP
Trigger: CGGGAGCTGCACACACCTGGGTGGACACAAGGCACGGCCACGTCATGTCTCTAAACTGCGGTCAGATGTGGCTTCTGGCTCCTCGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR TCA 90 bp GCAAGCGTGACCCTCGCGAGGCCCCGAGGAGCCAGAAGCCACATCTaGCCGCAGTTTAGAGACATGACGTGGCCGTGCCTTGTGTCCACC +
Preference number: 1 (lower is better)
Translates to: ASVTLARPRGARSHI*PQFRDMTWPCLVST
Trigger: GGTGGACACAAGGCACGGCCACGTCATGTCTCTAAACTGCGGTCAGATGTGGCTTCTGGCTCCTCGGGGCCTCGCGAGGGTCACGCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR CCA 90 bp GTTGGCGGGGAGGAGCTGGGTGACAGGCTGGTCACCGCTGGCCTTTaGACCCTGCGGGGCGAGCGCTTTGGGATTGTAGCAATTCTGTGT +
Preference number: 1 (lower is better)
Translates to: VGGEELGDRLVTAGL*TLRGERFGIVAILC
Trigger: ACACAGAATTGCTACAATCCCAAAGCGCTCGCCCCGCAGGGTCCAAAGGCCAGCGGTGACCAGCCTGTCACCCAGCTCCTCCCCGCCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR CCA 90 bp GGGCCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATaGAGGACGCTCAGGCGTGCACCAGAGCAGCATGTTTTCCTTCTC +
Preference number: 1 (lower is better)
Translates to: GPGEAAQRHCCHPGR*RTLRRAPEQHVFLL
Trigger: GAGAAGGAAAACATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
3UTR TCA 90 bp CCCAGTCCACATGAGTGCAATTGCCATGTTGATGTCAACAAGCAGTaGCTGAACCACCCCGGAGCAGACGGCGGGCGCTCCACAGAGGGG +
Preference number: 1 (lower is better)
Translates to: PSPHECNCHVDVNKQ*LNHPGADGGRSTEG
Trigger: CCCCTCTGTGGAGCGCCCGCCGTCTGCTCCGGGGTGGTTCAGTCACTGCTTGTTGACATCAACATGGCAATTGCACTCATGTGGACTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
3UTR TCA 90 bp GTCCACATGAGTGCAATTGCCATGTTGATGTCAACAAGCAGTGACTaGACCACCCCGGAGCAGACGGCGGGCGCTCCACAGAGGGGCCTT +
Preference number: 1 (lower is better)
Translates to: VHMSAIAMLMSTSSD*TTPEQTAGAPQRGL
Trigger: AAGGCCCCTCTGTGGAGCGCCCGCCGTCTGCTCCGGGGTGGTTCAGTCACTGCTTGTTGACATCAACATGGCAATTGCACTCATGTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
3UTR TCA 90 bp CAGTTCCCCCACGGTGGCAGATTTGCTTTAGGGTTCCTGTGTAACTaGGGCGCTTCACCCACAGTGGCCTCTCCGTGTGGCTTTCCTGGT +
Preference number: 1 (lower is better)
Translates to: QFPHGGRFALGFLCN*GASPTVASPCGFPG
Trigger: ACCAGGAAAGCCACACGGAGAGGCCACTGTGGGTGAAGCGCCTCAGTTACACAGGAACCCTAAAGCAAATCTGCCACCGTGGGGGAACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR CCA 90 bp AGAAACAAATTCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTaGCACCCGACTAACCCACACGGCAGCTCGCACGGTCCCAGTCCA +
Preference number: 1 (lower is better)
Translates to: RNKFVSHRCWSISLS*HPTNPHGSSHGPSP
Trigger: TGGACTGGGACCGTGCGAGCTGCCGTGTGGGTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGAATTTGTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
3UTR GCA 90 bp GTCCCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTaGTGGAGTATTTCATTGTCCTGGCACCCGACTAACCCACACGGC +
Preference number: 1 (lower is better)
Translates to: VPSCYFCRNKFVSHR*WSISLSWHPTNPHG
Trigger: GCCGTGTGGGTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
3UTR CCA 90 bp CCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTGCTaGAGTATTTCATTGTCCTGGCACCCGACTAACCCACACGGCAGC +
Preference number: 1 (lower is better)
Translates to: PSCYFCRNKFVSHRC*SISLSWHPTNPHGS
Trigger: GCTGCCGTGTGGGTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
3UTR-3UTR TCA 90 bp ACGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGCCGAGCGCTGCTGGTGACCAGGCAAGCGTaGCCCTCGCGAGGCCCCGAG +
Preference number: 2 (lower is better)
Translates to: TAGAPQRGLPAAPGRALLVTRQA*PSRGPE
Trigger: CTCGGGGCCTCGCGAGGGTCACGCTTGCCTGGTCAC...CAGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR CCA 90 bp GCTCCGGGCCGAGCGCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCAGCTGGGTGACAGGCTaGTCACCGCTGGCCTTTGGA +
Preference number: 2 (lower is better)
Translates to: APGRALLLLVGLVRPHSASWVTG*SPLAFG
Trigger: TCCAAAGGCCAGCGGTGACCAGCCTGTCACCCAGCT...GGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGCGCTCGGCCCGGAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR TCA 90 bp CACCCCGGAGCAGACGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGCAAGGTGACCAGTCGTaGGGTTTCCTAAGCAGCCCC +
Preference number: 2 (lower is better)
Translates to: HPGADGGRSTEGPSCCSGQGDQS*GFLSSP
Trigger: GGGGCTGCTTAGGAAACCTCACGACTGGTCACCTTG...CCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCGTCTGCTCCGGGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR GCA 90 bp GGGCCGAGCGCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTGCGACATGACGTGGCCGTaGCTTGTGTCCACCCAGGTG +
Preference number: 2 (lower is better)
Translates to: GPSAAAPRGPGEAAQRHCDMTWP*LVSTQV
Trigger: CACCTGGGTGGACACAAGGCACGGCCACGTCATGTC...GCAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGCGCTCGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR CCA 90 bp GCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGCCGAGCGCTGCTGCTCCTCGTGGAGTCACACCCTGGCTaGGCCTATGCGGCCAAGGCT +
Preference number: 2 (lower is better)
Translates to: APQRGLPAAPGRALLLLVESHPG*AYAAKA
Trigger: AGCCTTGGCCGCATAGGCCCAGCCAGGGTGTGACTC...CACGAGGAGCAGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR CCA 90 bp GAACCACCCCGGAGCAGACGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCGAGTCACACCCTGGCTaGGCCTATGCGGCCAAGGCT +
Preference number: 2 (lower is better)
Translates to: EPPRSRRRALHRGAFLLLESHPG*AYAAKA
Trigger: AGCCTTGGCCGCATAGGCCCAGCCAGGGTGTGACTC...GAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCGTCTGCTCCGGGGTGGTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR TCA 90 bp CGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGCCGAGCGCTGCTGCTGTAGCAATTCTGTGTaGGGAGTGCAAGGTGACCAG +
Preference number: 2 (lower is better)
Translates to: RRALHRGAFLLLRAERCCCSNSV*GVQGDQ
Trigger: CTGGTCACCTTGCACTCCTCACACAGAATTGCTACA...GCAGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR CCA 90 bp CACCCCGGAGCAGACGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGTCCGTGTGGCTTTCCTaGTCGACGGTGTCAGAAATG +
Preference number: 2 (lower is better)
Translates to: HPGADGGRSTEGPSCCSGSVWLS*STVSEM
Trigger: CATTTCTGACACCGTCGACCAGGAAAGCCACACGGA...CCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCGTCTGCTCCGGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR GCA 90 bp CAGGCTGGTCACCGCTGGCCTTTGGACCCTGCGGGGCGAGCGCTTTGGGATTGTGTCCACCCAGGTGTGTaGAGCTCCCGAGTCACACCC +
Preference number: 2 (lower is better)
Translates to: QAGHRWPLDPAGRALWDCVHPGV*SSRVTP
Trigger: GGGTGTGACTCGGGAGCTGCACACACCTGGGTGGAC...ACAATCCCAAAGCGCTCGCCCCGCAGGGTCCAAAGGCCAGCGGTGACCAGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR GCA 90 bp GCTCAGACCGTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGGTCCACCCAGGTGTGTaGAGCTCCCGAGTCACACCC +
Preference number: 2 (lower is better)
Translates to: AQTVGTEDTPRRPAQTHQVHPGV*SSRVTP
Trigger: GGGTGTGACTCGGGAGCTGCACACACCTGGGTGGAC...CTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCACGGTCTGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR GCA 90 bp AGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCTGGCCTTTGGACCCTaGGGGGCGAGCGCTTTGGGA +
Preference number: 2 (lower is better)
Translates to: RPHSAIAAILEDGGRSGVLAFGP*GASALG
Trigger: TCCCAAAGCGCTCGCCCCGCAGGGTCCAAAGGCCAG...CACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR CCA 90 bp GAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGAGTCACACCCTGGCTaGGCCTATGCGGCCAAGGCT +
Preference number: 2 (lower is better)
Translates to: EAAQRHCCHPGRWRTLRRESHPG*AYAAKA
Trigger: AGCCTTGGCCGCATAGGCCCAGCCAGGGTGTGACTC...ACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR CCA 90 bp TCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGATCAGGCTGGTCACCGCTaGCCTTTGGACCCTGCGGGG +
Preference number: 2 (lower is better)
Translates to: SDPPAPCISSVSSPTVADQAGHR*PLDPAG
Trigger: CCCCGCAGGGTCCAAAGGCCAGCGGTGACCAGCCTG...ATCTGCCACCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR GCA 90 bp CACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGGTCCACCCAGGTGTGTaGAGCTCCCGAGTCACACCC +
Preference number: 2 (lower is better)
Translates to: HSAIAAILEDGGRSGVHQVHPGV*SSRVTP
Trigger: GGGTGTGACTCGGGAGCTGCACACACCTGGGTGGAC...CTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR CCA 90 bp AGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGGCGCTTCACCCACAGTaGCCTCTCCGTGTGGCTTTC +
Preference number: 2 (lower is better)
Translates to: RPHSAIAAILEDGGRSGVALHPQ*PLRVAF
Trigger: GAAAGCCACACGGAGAGGCCACTGTGGGTGAAGCGC...CACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR TCA 90 bp GCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGCCAGAAGCCACATCTaGCCGCAGTTTAGAGACATG +
Preference number: 2 (lower is better)
Translates to: AAAPRGPGEAAQRHCCHPARSHI*PQFRDM
Trigger: CATGTCTCTAAACTGCGGTCAGATGTGGCTTCTGGC...AGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR CCA 90 bp CCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCGCGGGGCGAGCGCTTTaGGATTGTAGCAATTCTGTG +
Preference number: 2 (lower is better)
Translates to: PRRPAQTHQHLASPASVPAGRAL*DCSNSV
Trigger: CACAGAATTGCTACAATCCCAAAGCGCTCGCCCCGC...GGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR CCA 90 bp TTCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACCCAGTCACCGCTGGCCTTTaGACCCTGCGGGGCGAGCGC +
Preference number: 2 (lower is better)
Translates to: FVSHRCWSISLSWHPTNPVTAGL*TLRGER
Trigger: GCGCTCGCCCCGCAGGGTCCAAAGGCCAGCGGTGAC...TGGGTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR CCA 90 bp TCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGATAGTGGCCTCTCCGTGTaGCTTTCCTGGTCGACGGTG +
Preference number: 2 (lower is better)
Translates to: SDPPAPCISSVSSPTVADSGLSV*LSWSTV
Trigger: CACCGTCGACCAGGAAAGCCACACGGAGAGGCCACT...ATCTGCCACCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR CCA 90 bp ACCCTGCGGGGCGAGCGCTTTGGGATTGTAGCAATTCTGTGTGAGGAGTGCAAGTCCCGAGTCACACCCTaGCTGGGCCTATGCGGCCAA +
Preference number: 2 (lower is better)
Translates to: TLRGERFGIVAILCEECKSRVTP*LGLCGQ
Trigger: TTGGCCGCATAGGCCCAGCCAGGGTGTGACTCGGGA...CTTGCACTCCTCACACAGAATTGCTACAATCCCAAAGCGCTCGCCCCGCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR CCA 90 bp GAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTTCCGTGTGGCTTTCCTaGTCGACGGTGTCAGAAATG +
Preference number: 2 (lower is better)
Translates to: EAAQRHCCHPGRWRTLRRSVWLS*STVSEM
Trigger: CATTTCTGACACCGTCGACCAGGAAAGCCACACGGA...ACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR GCA 90 bp TGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAGCATGTTTTCGACATGACGTGGCCGTaGCTTGTGTCCACCCAGGTG +
Preference number: 2 (lower is better)
Translates to: CHPGRWRTLRRAPEQHVFDMTWP*LVSTQV
Trigger: CACCTGGGTGGACACAAGGCACGGCCACGTCATGTC...GAAAACATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR CCA 90 bp CGACTAACCCACACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCCCATTGCTGCCATCCTaGAAGATGGAGGACGCTCAG +
Preference number: 2 (lower is better)
Translates to: RLTHTAARTVPVHMSAIAPLLPS*KMEDAQ
Trigger: CTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGG...GGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTGTGGGTTAGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
3UTR-3UTR GCA 90 bp CTAACCCACACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGGTCAGAAATGTTTCCTaGAGCGGCAGGCAGGTGCAG +
Preference number: 2 (lower is better)
Translates to: LTHTAARTVPVHMSAIAMVRNVS*SGRQVQ
Trigger: CTGCACCTGCCTGCCGCTGCAGGAAACATTTCTGAC...CATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTGTGGGTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR GCA 90 bp GTTGTCCCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTGCTGGGAGGGGCCTTCCTGCTaGTCCGGGCCGAGCGCTGCT +
Preference number: 2 (lower is better)
Translates to: VVPSCYFCRNKFVSHRCWEGPSC*SGPSAA
Trigger: AGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTC...CCAGCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGGGACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
3UTR-3UTR CCA 90 bp CACCGCTGGCCTTTGGACCCTGCGGGGCGAGCGCTTTGGGATTGTAGCAATTCTTTTAGAGACATGACGTaGCCGTGCCTTGTGTCCACC +
Preference number: 2 (lower is better)
Translates to: HRWPLDPAGRALWDCSNSFRDMT*PCLVST
Trigger: GGTGGACACAAGGCACGGCCACGTCATGTCTCTAAA...AGAATTGCTACAATCCCAAAGCGCTCGCCCCGCAGGGTCCAAAGGCCAGCGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR CCA 90 bp GTTGTCCCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTGCTGGGTCACCGCTGGCCTTTaGACCCTGCGGGGCGAGCGC +
Preference number: 2 (lower is better)
Translates to: VVPSCYFCRNKFVSHRCWVTAGL*TLRGER
Trigger: GCGCTCGCCCCGCAGGGTCCAAAGGCCAGCGGTGAC...CCAGCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGGGACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR CCA 90 bp CACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGTTGATGTCGCGGGGCGAGCGCTTTaGGATTGTAGCAATTCTGTG +
Preference number: 2 (lower is better)
Translates to: HGSSHGPSPHECNCHVDVAGRAL*DCSNSV
Trigger: CACAGAATTGCTACAATCCCAAAGCGCTCGCCCCGC...GACATCAACATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR CCA 90 bp GCAGTTGTCCCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTGCCAGGCTGGTCACCGCTaGCCTTTGGACCCTGCGGGG +
Preference number: 2 (lower is better)
Translates to: AVVPSCYFCRNKFVSHRCQAGHR*PLDPAG
Trigger: CCCCGCAGGGTCCAAAGGCCAGCGGTGACCAGCCTG...GCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGGGACAACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR TCA 90 bp TCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACCCACCGCAGTTTAGAGACATaGCGTGGCCGTGCCTTGTGT +
Preference number: 2 (lower is better)
Translates to: SSATGAGVFHCPGTRLTHRSLET*RGRALC
Trigger: ACACAAGGCACGGCCACGTCATGTCTCTAAACTGCG...GTGGGTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR CCA 90 bp AAATTCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACTCCCGAGTCACACCCTaGCTGGGCCTATGCGGCCAA +
Preference number: 2 (lower is better)
Translates to: KFVSHRCWSISLSWHPTNSRVTP*LGLCGQ
Trigger: TTGGCCGCATAGGCCCAGCCAGGGTGTGACTCGGGA...GTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGAATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR CAA 90 bp TTCTGTAGAAACAAATTCGTCAGCCACAGGTGCTGGAGTATTTCATaGTCCTGGCACCCGACTAACCCACACGGCAGCTCGCACGGTCCC +
Preference number: 2 (lower is better)
Translates to: FCRNKFVSHRCWSIS*SWHPTNPHGSSHGP
Trigger: GGGACCGTGCGAGCTGCCGTGTGGGTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGAATTTGTTTCTACAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
3UTR-3UTR CCA 90 bp GCAGTTGTCCCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTGCAGTGGCCTCTCCGTGTaGCTTTCCTGGTCGACGGTG +
Preference number: 2 (lower is better)
Translates to: AVVPSCYFCRNKFVSHRCSGLSV*LSWSTV
Trigger: CACCGTCGACCAGGAAAGCCACACGGAGAGGCCACT...GCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGGGACAACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR TCA 90 bp GCAGTTGTCCCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTGCCAAGGTGACCAGTCGTaGGGTTTCCTAAGCAGCCCC +
Preference number: 2 (lower is better)
Translates to: AVVPSCYFCRNKFVSHRCQGDQS*GFLSSP
Trigger: GGGGCTGCTTAGGAAACCTCACGACTGGTCACCTTG...GCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGGGACAACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR GCA 90 bp TCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACCCACCCCAGTCCACATGAGTaGAATTGCCATGTTGATGTC +
Preference number: 2 (lower is better)
Translates to: SSATGAGVFHCPGTRLTHPSPHE*NCHVDV
Trigger: GACATCAACATGGCAATTGCACTCATGTGGACTGGG...GTGGGTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
3UTR-3UTR TCA 90 bp GCAGTTGTCCCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTGCCGCAGTTTAGAGACATaGCGTGGCCGTGCCTTGTGT +
Preference number: 2 (lower is better)
Translates to: AVVPSCYFCRNKFVSHRCRSLET*RGRALC
Trigger: ACACAAGGCACGGCCACGTCATGTCTCTAAACTGCG...GCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGGGACAACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR TCA 90 bp GGGAAGGTTTTTACATCATCACCGCAGTTGTCCCCAGCTGTTATTTCTGTAGAACAAGGTGACCAGTCGTaGGGTTTCCTAAGCAGCCCC +
Preference number: 2 (lower is better)
Translates to: GKVFTSSPQLSPAVISVEQGDQS*GFLSSP
Trigger: GGGGCTGCTTAGGAAACCTCACGACTGGTCACCTTG...TTCTACAGAAATAACAGCTGGGGACAACTGCGGTGATGATGTAAAAACCTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR GCA 90 bp TCATCACCGCAGTTGTCCCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCGTCAGAAATGTTTCCTaGAGCGGCAGGCAGGTGCAG +
Preference number: 2 (lower is better)
Translates to: SSPQLSPAVISVETNSSAVRNVS*SGRQVQ
Trigger: CTGCACCTGCCTGCCGCTGCAGGAAACATTTCTGAC...GGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGGGACAACTGCGGTGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR CCA 90 bp GGGAAGGTTTTTACATCATCACCGCAGTTGTCCCCAGCTGTTATTTCTGTAGAATGCCATCCTGGAAGATaGAGGACGCTCAGGCGTGCA +
Preference number: 2 (lower is better)
Translates to: GKVFTSSPQLSPAVISVECHPGR*RTLRRA
Trigger: TGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCA...TTCTACAGAAATAACAGCTGGGGACAACTGCGGTGATGATGTAAAAACCTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
3UTR-3UTR TCA 90 bp CCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTGCTGGAGTATTGCCAGAAGCCACATCTaGCCGCAGTTTAGAGACATG +
Preference number: 2 (lower is better)
Translates to: PSCYFCRNKFVSHRCWSIARSHI*PQFRDM
Trigger: CATGTCTCTAAACTGCGGTCAGATGTGGCTTCTGGC...AATACTCCAGCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR GCA 90 bp GGGAAGGTTTTTACATCATCACCGCAGTTGTCCCCAGCTGTTATTTCTGTAGAACCACATGAGTGCAATTaGCATGTTGATGTCAACAAG +
Preference number: 2 (lower is better)
Translates to: GKVFTSSPQLSPAVISVEPHECN*HVDVNK
Trigger: CTTGTTGACATCAACATGGCAATTGCACTCATGTGG...TTCTACAGAAATAACAGCTGGGGACAACTGCGGTGATGATGTAAAAACCTTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
3UTR GCA 72 bp GCAGACGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTaGTCCGGGCCGAGCGCTGCTGCTCCTCGTGGGCCT +
Preference number: 3 (lower is better)
Translates to: ADGGRSTEGPSC*SGPSAAAPRGP
Trigger: AGGCCCACGAGGAGCAGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCGTCTGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
3UTR TCA 72 bp CTCCGGGCCGAGCGCTGCTGCTCCTCGTGGGCCTGGTaGGGCCGCACAGCGCCATTGCTGCCATCCTGGAAG +
Preference number: 3 (lower is better)
Translates to: LRAERCCSSWAW*GRTAPLLPSWK
Trigger: CTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGCGCTCGGCCCGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
3UTR TCA 72 bp GGTTTCCTAAGCAGCCCCAGGGTGACCAGGCAAGCGTaGCCCTCGCGAGGCCCCGAGGAGCCAGAAGCCACA +
Preference number: 3 (lower is better)
Translates to: GFLSSPRVTRQA*PSRGPEEPEAT
Trigger: TGTGGCTTCTGGCTCCTCGGGGCCTCGCGAGGGTCACGCTTGCCTGGTCACCCTGGGGCTGCTTAGGAAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR GCA 72 bp CCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTGCTaGCATCCTGGAAGATGGAGGACGCTCAGGCGTGCA +
Preference number: 3 (lower is better)
Translates to: PRGPGEAAQRHC*HPGRWRTLRRA
Trigger: TGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
3UTR GCA 72 bp GCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTaGTGCCATCCTGGAAGATGGAGGACGCTCAGGCGT +
Preference number: 3 (lower is better)
Translates to: APRGPGEAAQRH*CHPGRWRTLRR
Trigger: ACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
3UTR GCA 72 bp CATGACGTGGCCGTGCCTTGTGTCCACCCAGGTGTGTaGAGCTCCCGAGTCACACCCTGGCTGGGCCTATGC +
Preference number: 3 (lower is better)
Translates to: HDVAVPCVHPGV*SSRVTPWLGLC
Trigger: GCATAGGCCCAGCCAGGGTGTGACTCGGGAGCTGCACACACCTGGGTGGACACAAGGCACGGCCACGTCATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR CCA 72 bp GAGGAGCTGGGTGACAGGCTGGTCACCGCTGGCCTTTaGACCCTGCGGGGCGAGCGCTTTGGGATTGTAGCA +
Preference number: 3 (lower is better)
Translates to: EELGDRLVTAGL*TLRGERFGIVA
Trigger: TGCTACAATCCCAAAGCGCTCGCCCCGCAGGGTCCAAAGGCCAGCGGTGACCAGCCTGTCACCCAGCTCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR CAA 90 bp CTCTCCGTGTGGCTTTCCTGGTCGACGGTGTCAGAAATGTTTCCTGCAGCGGCAGGTCACCGCTGGCCTTaGGACCCTGCGGGGCGAGCG +
Preference number: 3 (lower is better)
Translates to: LSVWLSWSTVSEMFPAAAGHRWP*DPAGRA
Trigger: CGCTCGCCCCGCAGGGTCCAAAGGCCAGCGGTGACC...TGCCGCTGCAGGAAACATTTCTGACACCGTCGACCAGGAAAGCCACACGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR GCA 72 bp CACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTaGATCTCCAGCGTCAGTTCCCCCACGGTGGCAGAT +
Preference number: 3 (lower is better)
Translates to: HTATSSSDPPAP*ISSVSSPTVAD
Trigger: ATCTGCCACCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
3UTR CCA 72 bp GAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATaGAGGACGCTCAGGCGTGCACCAGAGCAGCATGTT +
Preference number: 3 (lower is better)
Translates to: EAAQRHCCHPGR*RTLRRAPEQHV
Trigger: AACATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
3UTR CCA 72 bp CGCTTCACCCACAGTGGCCTCTCCGTGTGGCTTTCCTaGTCGACGGTGTCAGAAATGTTTCCTGCAGCGGCA +
Preference number: 3 (lower is better)
Translates to: RFTHSGLSVWLS*STVSEMFPAAA
Trigger: TGCCGCTGCAGGAAACATTTCTGACACCGTCGACCAGGAAAGCCACACGGAGAGGCCACTGTGGGTGAAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR-3UTR CAA 90 bp GTTGTCCCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTGCTGGGGTCACCGCTGGCCTTaGGACCCTGCGGGGCGAGCG +
Preference number: 3 (lower is better)
Translates to: VVPSCYFCRNKFVSHRCWGHRWP*DPAGRA
Trigger: CGCTCGCCCCGCAGGGTCCAAAGGCCAGCGGTGACC...CCAGCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGGGACAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR TCA 72 bp GAGCCAGAAGCCACATCTGACCGCAGTTTAGAGACATaGCGTGGCCGTGCCTTGTGTCCACCCAGGTGTGTG +
Preference number: 3 (lower is better)
Translates to: EPEATSDRSLET*RGRALCPPRCV
Trigger: CACACACCTGGGTGGACACAAGGCACGGCCACGTCATGTCTCTAAACTGCGGTCAGATGTGGCTTCTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR TCA 72 bp CACGGTGGCAGATTTGCTTTAGGGTTCCTGTGTAACTaGGGCGCTTCACCCACAGTGGCCTCTCCGTGTGGC +
Preference number: 3 (lower is better)
Translates to: HGGRFALGFLCN*GASPTVASPCG
Trigger: GCCACACGGAGAGGCCACTGTGGGTGAAGCGCCTCAGTTACACAGGAACCCTAAAGCAAATCTGCCACCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
3UTR TCA 72 bp AGTGCAATTGCCATGTTGATGTCAACAAGCAGTGACTaGACCACCCCGGAGCAGACGGCGGGCGCTCCACAG +
Preference number: 3 (lower is better)
Translates to: SAIAMLMSTSSD*TTPEQTAGAPQ
Trigger: CTGTGGAGCGCCCGCCGTCTGCTCCGGGGTGGTTCAGTCACTGCTTGTTGACATCAACATGGCAATTGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
3UTR TCA 72 bp CATGAGTGCAATTGCCATGTTGATGTCAACAAGCAGTaGCTGAACCACCCCGGAGCAGACGGCGGGCGCTCC +
Preference number: 3 (lower is better)
Translates to: HECNCHVDVNKQ*LNHPGADGGRS
Trigger: GGAGCGCCCGCCGTCTGCTCCGGGGTGGTTCAGTCACTGCTTGTTGACATCAACATGGCAATTGCACTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
3UTR CCA 72 bp TTCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTaGCACCCGACTAACCCACACGGCAGCTCGCACGGT +
Preference number: 3 (lower is better)
Translates to: FVSHRCWSISLS*HPTNPHGSSHG
Trigger: ACCGTGCGAGCTGCCGTGTGGGTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
3UTR-3UTR CAA 90 bp AAGGCTGAACGTCACCAGCCTCATCAGCTTTTCTTACATTTTATGGGAAGGTTTGGCCGCACAGCGCCATaGCTGCCATCCTGGAAGATG +
Preference number: 3 (lower is better)
Translates to: KAERHQPHQLFLHFMGRFGRTAP*LPSWKM
Trigger: CATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCC...AAACCTTCCCATAAAATGTAAGAAAAGCTGATGAGGCTGGTGACGTTCAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
3UTR-3UTR CAA 90 bp TCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACCCACAGTGCAATTGCCATGTaGATGTCAACAAGCAGTGAC +
Preference number: 3 (lower is better)
Translates to: SSATGAGVFHCPGTRLTHSAIAM*MSTSSD
Trigger: GTCACTGCTTGTTGACATCAACATGGCAATTGCACT...GTGGGTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
3UTR GCA 72 bp TGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTaGTGGAGTATTTCATTGTCCTGGCACCCGACTAAC +
Preference number: 3 (lower is better)
Translates to: CYFCRNKFVSHR*WSISLSWHPTN
Trigger: GTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp GCTCCGGGCCGAGCGCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCCCGATGGCCGCCCCATaGGGGCAGAGCGAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: APGRALLLLVGLVRPHSAPMAAP*GQSEAP
Trigger: GGGGGCCTCGCTCTGCCCTCATGGGGCGGCCATCGG...GGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGCGCTCGGCCCGGAGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297469.3
ENST00000397092.5
CDS-3UTR GCA 90 bp CGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGCCGAGCGCTGCTGCGAGGGGCCTTCCTGCTaGTCCGGGCCGAGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: RRALHRGAFLLLRAERCCEGPSC*SGPSAA
Trigger: AGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTC...GCAGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp CACCCCGGAGCAGACGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGGCAGGTGCACGGCGGTaGAGGGCACCAGCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: HPGADGGRSTEGPSCCSGAGARR*RAPAWL
Trigger: CAGCCACGCTGGTGCCCTTCACCGCCGTGCACCTGC...CCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCGTCTGCTCCGGGGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GCTCCGGGCCGAGCGCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCCCGCAGGCTGCGCGGTaGCTGGGTACATCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: APGRALLLLVGLVRPHSAPQAAR*LGTSPG
Trigger: GCCTGGAGATGTACCCAGGCACCGCGCAGCCTGCGG...GGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGCGCTCGGCCCGGAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GCTCCGGGCCGAGCGCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCTTGGGGGCCGCAGGCTaGGCGGTGCCTGGGTACATC +
Preference number: 4 (lower is better)
Translates to: APGRALLLLVGLVRPHSALGAAG*AVPGYI
Trigger: GATGTACCCAGGCACCGCGCAGCCTGCGGCCCCCAA...GGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGCGCTCGGCCCGGAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp ACGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGCCGAGCGCTGCTGGAGGGGCCTTCCTGCTaGTCCGGGCCGAGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: TAGAPQRGLPAAPGRALLEGPSC*SGPSAA
Trigger: AGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTC...CAGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GGGCCGAGCGCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTGCTCGGGGCCGCTGAACTaGCTCATGCGGGGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: GPSAAAPRGPGEAAQRHCSGPLN*LMRGGH
Trigger: GTGGCCGCCCCGCATGAGGCAGTTCAGCGGCCCCGA...GCAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGCGCTCGGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297469.3
ENST00000397092.5
CDS-3UTR GCA 90 bp ACGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGCCGAGCGCTGCTGCCGCAGGCTGCGCGGTaGCTGGGTACATCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: TAGAPQRGLPAAPGRALLPQAAR*LGTSPG
Trigger: GCCTGGAGATGTACCCAGGCACCGCGCAGCCTGCGG...CAGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp CACCCCGGAGCAGACGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGGCCGGGCGTGGTGCTTaGTGCGGAACAGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: HPGADGGRSTEGPSCCSGAGRGA*CGTGCS
Trigger: GCTGCAGCCTGTTCCGCACCAAGCACCACGCCCGGC...CCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCGTCTGCTCCGGGGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CCGGGCCGAGCGCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTCAGGCCTCGTCGGTGTaGTGCAGGTGCACGGCGGTG +
Preference number: 4 (lower is better)
Translates to: PGRALLLLVGLVRPHSAIQASSV*CRCTAV
Trigger: CACCGCCGTGCACCTGCAGCACACCGACGAGGCCTG...AATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGCGCTCGGCCCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CCGGGCCGAGCGCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTCCACCGCGAGGATCATaGGGAGCGCCTTCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: PGRALLLLVGLVRPHSAIPPRGS*GAPSAA
Trigger: GGCGGCAGAAGGCGCTCCGCATGATCCTCGCGGTGG...AATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGCGCTCGGCCCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp GCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGCCGAGCGCTGCTGCTCCTCGTGGGCATGGTGCATCCGTaGAGGCGAGGGCCCTCCGCG +
Preference number: 4 (lower is better)
Translates to: APQRGLPAAPGRALLLLVGMVHP*RRGPSA
Trigger: CGCGGAGGGCCCTCGCCTCCACGGATGCACCATGCC...CACGAGGAGCAGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp CACCCCGGAGCAGACGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGCCGTGCGTGAGGGGGTaGGCATGGCGGAAAGACTGC +
Preference number: 4 (lower is better)
Translates to: HPGADGGRSTEGPSCCSGPCVRG*AWRKDC
Trigger: GCAGTCTTTCCGCCATGCCCACCCCCTCACGCACGG...CCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCGTCTGCTCCGGGGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000617001.1
CDS-3UTR TCA 90 bp GCTCAGACCGTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCCGATGGCCGCCCCATaGGGGCAGAGCGAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: AQTVGTEDTPRRPAQTHQPMAAP*GQSEAP
Trigger: GGGGGCCTCGCTCTGCCCTCATGGGGCGGCCATCGG...CTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCACGGTCTGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297469.3
ENST00000397092.5
CDS-3UTR GCA 90 bp GGGCCGAGCGCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTGCGTGACCTCGAGCCACTaGACCTCCCGGACATCCGCG +
Preference number: 4 (lower is better)
Translates to: GPSAAAPRGPGEAAQRHCVTSSH*TSRTSA
Trigger: CGCGGATGTCCGGGAGGTGCAGTGGCTCGAGGTCAC...GCAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGCGCTCGGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GAACCACCCCGGAGCAGACGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCCCACCGCGAGGATCATaGGGAGCGCCTTCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: EPPRSRRRALHRGAFLLLPPRGS*GAPSAA
Trigger: GGCGGCAGAAGGCGCTCCGCATGATCCTCGCGGTGG...GAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCGTCTGCTCCGGGGTGGTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GGGCCGAGCGCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTGCGGCGGAAAGACTGCTTaGAGGGAGCGGCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: GPSAAAPRGPGEAAQRHCGGKTA*RERPQA
Trigger: AGCCTGGGGCCGCTCCCTGCAAGCAGTCTTTCCGCC...GCAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGCGCTCGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GCTCCGGGCCGAGCGCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCTACCTCTGCTGGACCTaGCGAATGCCTGAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: APGRALLLLVGLVRPHSAYLCWT*RMPEQG
Trigger: GCCCTGCTCAGGCATTCGGCAGGTCCAGCAGAGGTA...GGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGCGCTCGGCCCGGAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp CACCCCGGAGCAGACGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGCTCCTCACACCGGCATaGTGCATCCGTGGAGGCGAG +
Preference number: 4 (lower is better)
Translates to: HPGADGGRSTEGPSCCSGLLTPA*CIRGGE
Trigger: CTCGCCTCCACGGATGCACCATGCCGGTGTGAGGAG...CCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCGTCTGCTCCGGGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp GCTCCGGGCCGAGCGCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCCCCACGCCCCGGGCTTaGGAAGTCACATCCATGTCT +
Preference number: 4 (lower is better)
Translates to: APGRALLLLVGLVRPHSAPTPRA*EVTSMS
Trigger: AGACATGGATGTGACTTCCCAAGCCCGGGGCGTGGG...GGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGCGCTCGGCCCGGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp GGGCCGAGCGCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTGCTGCAGCGCATGGCCCTaGCCAGGGCGATGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: GPSAAAPRGPGEAAQRHCCSAWP*PGRCSG
Trigger: ACCGCTACATCGCCCTGGCCAGGGCCATGCGCTGCA...GCAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGCGCTCGGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp GGGCCGAGCGCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTGCGGGCACCAGCGTGGCTaGCACGGATGCCATCCAGAT +
Preference number: 4 (lower is better)
Translates to: GPSAAAPRGPGEAAQRHCGHQRG*HGCHPD
Trigger: ATCTGGATGGCATCCGTGTCAGCCACGCTGGTGCCC...GCAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGCGCTCGGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GGGCCGAGCGCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTGCGCGGCCACTTCCGAGTaGGCCCCCTACTGGCCATTT +
Preference number: 4 (lower is better)
Translates to: GPSAAAPRGPGEAAQRHCAATSE*APYWPF
Trigger: AAATGGCCAGTAGGGGGCGCACTCGGAAGTGGCCGC...GCAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGCGCTCGGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297469.3
ENST00000397092.5
CDS-3UTR GCA 90 bp CACCCCGGAGCAGACGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGAGTCCCGCGTGGAGCTaGTCACTCTCTGGGTACCTG +
Preference number: 4 (lower is better)
Translates to: HPGADGGRSTEGPSCCSGSPAWS*SLSGYL
Trigger: CAGGTACCCAGAGAGTGAGCAGCTCCACGCGGGACT...CCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCGTCTGCTCCGGGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp GAACCACCCCGGAGCAGACGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCGGCGGAAAGACTGCTTaGAGGGAGCGGCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: EPPRSRRRALHRGAFLLLGGKTA*RERPQA
Trigger: AGCCTGGGGCCGCTCCCTGCAAGCAGTCTTTCCGCC...GAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCGTCTGCTCCGGGGTGGTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CAGGCTGGTCACCGCTGGCCTTTGGACCCTGCGGGGCGAGCGCTTTGGGATTGTCTCCGGGCCGAGCGCTaGTGCTCCTCGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QAGHRWPLDPAGRALWDCLRAER*CSSWAW
Trigger: CCAGGCCCACGAGGAGCAGCAGCGCTCGGCCCGGAG...ACAATCCCAAAGCGCTCGCCCCGCAGGGTCCAAAGGCCAGCGGTGACCAGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp CGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGCCGAGCGCTGCTGCTTGCAGCCCCTTCTGTaGTCCTGGAAGCCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: RRALHRGAFLLLRAERCCLQPLL*SWKPPW
Trigger: CCAAGGAGGCTTCCAGGAGCACAGAAGGGGCTGCAA...GCAGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397088.4
ENST00000397092.5
CDS-3UTR TCA 90 bp GCTCCGGGCCGAGCGCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCTCTACACGGCACTGCTaGACCTCACATCCGACTGCT +
Preference number: 4 (lower is better)
Translates to: APGRALLLLVGLVRPHSASTRHC*TSHPTA
Trigger: AGCAGTCGGATGTGAGGTTCAGCAGTGCCGTGTAGA...GGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGCGCTCGGCCCGGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR TCA 90 bp GGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCGTGACCAGGCAAGCGTaGCCCTCGCGAGGCCCCGAG +
Preference number: 4 (lower is better)
Translates to: GRTAPLLPSWKMEDAQACVTRQA*PSRGPE
Trigger: CTCGGGGCCTCGCGAGGGTCACGCTTGCCTGGTCAC...GCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCAATGCGGAGCGCCTTCTaGCGCCGGGGCCGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: VGTEDTPRRPAQTHQHLAMRSAF*RRGRSP
Trigger: TGGGCTGCGGCCCCGGCGGCAGAAGGCGCTCCGCAT...TGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CACCCCGGAGCAGACGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGGACCCACCAGCACCTTaGATCTCCAGCGTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: HPGADGGRSTEGPSCCSGDPPAP*ISSVSS
Trigger: GGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTC...CCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCGTCTGCTCCGGGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GCTCCGGGCCGAGCGCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCGAGGACGCTCAGGCGTaGACCAGAGCAGCATGTTTT +
Preference number: 4 (lower is better)
Translates to: APGRALLLLVGLVRPHSAEDAQA*TRAACF
Trigger: AAAACATGCTGCTCTGGTGCACGCCTGAGCGTCCTC...GGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGCGCTCGGCCCGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGCTCCGGGCCGAGCGCTaGTGCTCCTCGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RPAQTHQHLASPASVPPRLRAER*CSSWAW
Trigger: CCAGGCCCACGAGGAGCAGCAGCGCTCGGCCCGGAG...CCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCCTCCGGGCCGAGCGCTaGTGCTCCTCGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VRPHSAIAAILEDGGRSGLRAER*CSSWAW
Trigger: CCAGGCCCACGAGGAGCAGCAGCGCTCGGCCCGGAG...GCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp CTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGGCATGGTGCATCCGTaGAGGCGAGGGCCCTCCGCG +
Preference number: 4 (lower is better)
Translates to: LLLVGLVRPHSAIAAILEGMVHP*RRGPSA
Trigger: CGCGGAGGGCCCTCGCCTCCACGGATGCACCATGCC...TTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp GGGCCGAGCGCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTGCAGCTGGGTGACAGGCTaGTCACCGCTGGCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: GPSAAAPRGPGEAAQRHCSWVTG*SPLAFG
Trigger: TCCAAAGGCCAGCGGTGACCAGCCTGTCACCCAGCT...GCAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGCGCTCGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp GCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGCCGAGCGCTGCTGCTCCTCGTGGGCTGGAGGTGCACTTaGAACCCGCTGCAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: APQRGLPAAPGRALLLLVGWRCT*NPLQEV
Trigger: CACCTCCTGCAGCGGGTTCCAAGTGCACCTCCAGCC...CACGAGGAGCAGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397088.4
ENST00000397092.5
CDS-3UTR TCA 90 bp CCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCGCAGGTGCACGGCGGTaGAGGGCACCAGCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PRRPAQTHQHLASPASVPAGARR*RAPAWL
Trigger: CAGCCACGCTGGTGCCCTTCACCGCCGTGCACCTGC...GGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp CACCCCGGAGCAGACGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGCGCAGTTTAGAGACATaGCGTGGCCGTGCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: HPGADGGRSTEGPSCCSGRSLET*RGRALC
Trigger: ACACAAGGCACGGCCACGTCATGTCTCTAAACTGCG...CCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCGTCTGCTCCGGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR TCA 90 bp GTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCAGTGACCAGGCAAGCGTaGCCCTCGCGAGGCCCCGAG +
Preference number: 4 (lower is better)
Translates to: VGTEDTPRRPAQTHQHLAVTRQA*PSRGPE
Trigger: CTCGGGGCCTCGCGAGGGTCACGCTTGCCTGGTCAC...TGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp GGGCCGAGCGCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTGCTCAACAAGCAGTGACTaGACCACCCCGGAGCAGACG +
Preference number: 4 (lower is better)
Translates to: GPSAAAPRGPGEAAQRHCSTSSD*TTPEQT
Trigger: CGTCTGCTCCGGGGTGGTTCAGTCACTGCTTGTTGA...GCAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGCGCTCGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGCCGAGCGCTGCTGCTCCTCGTGAGTCCCGCGTGGAGCTaGTCACTCTCTGGGTACCTG +
Preference number: 4 (lower is better)
Translates to: APQRGLPAAPGRALLLLVSPAWS*SLSGYL
Trigger: CAGGTACCCAGAGAGTGAGCAGCTCCACGCGGGACT...CACGAGGAGCAGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp GCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTTGGTGCGGAACAGGCTaGAGCGCATGGCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: AAAPRGPGEAAQRHCCHPWCGTG*SAWPWP
Trigger: TGGCCAGGGCCATGCGCTGCAGCCTGTTCCGCACCA...AGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CAGGCTGGTCACCGCTGGCCTTTGGACCCTGCGGGGCGAGCGCTTTGGGATTGTCAGGCCTCGTCGGTGTaGTGCAGGTGCACGGCGGTG +
Preference number: 4 (lower is better)
Translates to: QAGHRWPLDPAGRALWDCQASSV*CRCTAV
Trigger: CACCGCCGTGCACCTGCAGCACACCGACGAGGCCTG...ACAATCCCAAAGCGCTCGCCCCGCAGGGTCCAAAGGCCAGCGGTGACCAGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp CACCCCGGAGCAGACGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGGAGGACGCTCAGGCGTaGACCAGAGCAGCATGTTTT +
Preference number: 4 (lower is better)
Translates to: HPGADGGRSTEGPSCCSGEDAQA*TRAACF
Trigger: AAAACATGCTGCTCTGGTGCACGCCTGAGCGTCCTC...CCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCGTCTGCTCCGGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp GCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTAGGCTGCGCGGTGCCTaGGTACATCTCCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: AAAPRGPGEAAQRHCCHPRLRGA*VHLQAH
Trigger: GTGGGCCTGGAGATGTACCCAGGCACCGCGCAGCCT...AGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp CACCCCGGAGCAGACGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGGCGGGGCGAGCGCTTTaGGATTGTAGCAATTCTGTG +
Preference number: 4 (lower is better)
Translates to: HPGADGGRSTEGPSCCSGAGRAL*DCSNSV
Trigger: CACAGAATTGCTACAATCCCAAAGCGCTCGCCCCGC...CCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCGTCTGCTCCGGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp GGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGGTCACCGCTGGCCTTTaGACCCTGCGGGGCGAGCGC +
Preference number: 4 (lower is better)
Translates to: GEAAQRHCCHPGRWRTLRVTAGL*TLRGER
Trigger: GCGCTCGCCCCGCAGGGTCCAAAGGCCAGCGGTGAC...CCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp GGCCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCCAGGCTGGTCACCGCTaGCCTTTGGACCCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: GLVRPHSAIAAILEDGGRQAGHR*PLDPAG
Trigger: CCCCGCAGGGTCCAAAGGCCAGCGGTGACCAGCCTG...GCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp TCCACAGAGGGGCCTTCCTGCTGCTCCGGGCCGAGCGCTGCTGCTCCTCGTGGGAGCTGGGTGACAGGCTaGTCACCGCTGGCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: STEGPSCCSGPSAAAPRGSWVTG*SPLAFG
Trigger: TCCAAAGGCCAGCGGTGACCAGCCTGTCACCCAGCT...CCCACGAGGAGCAGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp GCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGCCGAGCGCTGCTGCTCCTCGTGGCGCTTCACCCACAGTaGCCTCTCCGTGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: APQRGLPAAPGRALLLLVALHPQ*PLRVAF
Trigger: GAAAGCCACACGGAGAGGCCACTGTGGGTGAAGCGC...CACGAGGAGCAGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp CGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGGGGAAGGTTCCCGGCTaGCTGGCGGGTGCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: RPAQTHQHLASPASVPPRGKVPG*LAGASS
Trigger: GGAGGACGCACCCGCCAGCCAGCCGGGAACCTTCCC...CCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000397088.4
CDS-3UTR TCA 90 bp GCTCCGGGCCGAGCGCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCTGTAGCAATTCTGTGTaGGGAGTGCAAGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: APGRALLLLVGLVRPHSACSNSV*GVQGDQ
Trigger: CTGGTCACCTTGCACTCCTCACACAGAATTGCTACA...GGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGCGCTCGGCCCGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp GAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTTCCTCGTGGGCCTGGTaGGGCCGCACAGCGCCATTG +
Preference number: 4 (lower is better)
Translates to: EAAQRHCCHPGRWRTLRRSSWAW*GRTAPL
Trigger: CAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGA...ACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GAACCACCCCGGAGCAGACGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCCAGGGCCGCCTCTCCTaGTCATGGTTGCGGATTTCA +
Preference number: 4 (lower is better)
Translates to: EPPRSRRRALHRGAFLLLQGRLS*SWLRIS
Trigger: TGAAATCCGCAACCATGAGCAGGAGAGGCGGCCCTG...GAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCGTCTGCTCCGGGGTGGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297469.3
ENST00000397092.5
CDS-3UTR GCA 90 bp GGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGGGGTGTCGGCCACCGTaGACAGTCCCGCGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: GEAAQRHCCHPGRWRTLRGCRPP*TVPRGA
Trigger: AGCTCCACGCGGGACTGTGCACGGTGGCCGACACCC...CCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp GGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCGGGTGTCGGCCACCGTaGACAGTCCCGCGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: GHRGHTATSSSDPPAPCIGCRPP*TVPRGA
Trigger: AGCTCCACGCGGGACTGTGCACGGTGGCCGACACCC...GATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp GGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCCTCACACCGGCATGGTaGATCCGTGGAGGCGAGGGC +
Preference number: 4 (lower is better)
Translates to: GRTAPLLPSWKMEDAQACLTPAW*IRGGEG
Trigger: GCCCTCGCCTCCACGGATGCACCATGCCGGTGTGAG...GCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp TCAGACCGTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCGCAGGCTGCGCGGTaGCTGGGTACATCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SDRGHRGHTATSSSDPPAPQAAR*LGTSPG
Trigger: GCCTGGAGATGTACCCAGGCACCGCGCAGCCTGCGG...TGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCACGGTCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGCATTGGCCAGGGCGGTaGCCAGGAGCGGGTGGGACA +
Preference number: 4 (lower is better)
Translates to: RPAQTHQHLASPASVPPRHWPGR*PGAGGT
Trigger: TGTCCCACCCGCTCCTGGGCACCGCCCTGGCCAATG...CCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTCAGGCCTCGTCGGTGTaGTGCAGGTGCACGGCGGTG +
Preference number: 4 (lower is better)
Translates to: EAAQRHCCHPGRWRTLRRQASSV*CRCTAV
Trigger: CACCGCCGTGCACCTGCAGCACACCGACGAGGCCTG...ACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GCTCAGACCGTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGGTGACCTCGAGCCACTaGACCTCCCGGACATCCGCG +
Preference number: 4 (lower is better)
Translates to: AQTVGTEDTPRRPAQTHQVTSSH*TSRTSA
Trigger: CGCGGATGTCCGGGAGGTGCAGTGGCTCGAGGTCAC...CTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCACGGTCTGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GGCCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCGTGACCTCGAGCCACTaGACCTCCCGGACATCCGCG +
Preference number: 4 (lower is better)
Translates to: GLVRPHSAIAAILEDGGRVTSSH*TSRTSA
Trigger: CGCGGATGTCCGGGAGGTGCAGTGGCTCGAGGTCAC...GCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGCCACCGCGAGGATCATaGGGAGCGCCTTCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: AQTHQHLASPASVPPRWQPPRGS*GAPSAA
Trigger: GGCGGCAGAAGGCGCTCCGCATGATCCTCGCGGTGG...CTGCCACCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCCTGGCCTTTGGACCCTaGGGGGCGAGCGCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: GRTAPLLPSWKMEDAQACLAFGP*GASALG
Trigger: TCCCAAAGCGCTCGCCCCGCAGGGTCCAAAGGCCAG...GCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GCTCAGACCGTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCTGGCCTTTGGACCCTaGGGGGCGAGCGCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: AQTVGTEDTPRRPAQTHQLAFGP*GASALG
Trigger: TCCCAAAGCGCTCGCCCCGCAGGGTCCAAAGGCCAG...CTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCACGGTCTGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GGCCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCCTGGCCTTTGGACCCTaGGGGGCGAGCGCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: GLVRPHSAIAAILEDGGRLAFGP*GASALG
Trigger: TCCCAAAGCGCTCGCCCCGCAGGGTCCAAAGGCCAG...GCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGACAGAGGGGCCTTCCTaGTGCTCCGGGCCGAGCGCT +
Preference number: 4 (lower is better)
Translates to: GEAAQRHCCHPGRWRTLRTEGPS*CSGPSA
Trigger: AGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGT...CCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCACAGAGGGGCCTTCCTaGTGCTCCGGGCCGAGCGCT +
Preference number: 4 (lower is better)
Translates to: GHRGHTATSSSDPPAPCITEGPS*CSGPSA
Trigger: AGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGT...GATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGCCGAGCGCTGCTGCTCCTCGTGTCTGGGTACCTGGGTTaGAGCCCCTTCTGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: APQRGLPAAPGRALLLLVSGYLG*SPFCAP
Trigger: AGGAGCACAGAAGGGGCTGCAACCCAGGTACCCAGA...CACGAGGAGCAGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp CAGGCTGGTCACCGCTGGCCTTTGGACCCTGCGGGGCGAGCGCTTTGGGATTGTGCTGGACCTGCCGAATaGCTGAGCAGGGCTGCCGTC +
Preference number: 4 (lower is better)
Translates to: QAGHRWPLDPAGRALWDCAGPAE*LSRAAV
Trigger: GACGGCAGCCCTGCTCAGGCATTCGGCAGGTCCAGC...ACAATCCCAAAGCGCTCGCCCCGCAGGGTCCAAAGGCCAGCGGTGACCAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397092.5
CDS-3UTR CCA 90 bp AGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTGGCATGGTGCATCCGTaGAGGCGAGGGCCCTCCGCG +
Preference number: 4 (lower is better)
Translates to: RTHRDVQLRPTSTLHLQRGMVHP*RRGPSA
Trigger: CGCGGAGGGCCCTCGCCTCCACGGATGCACCATGCC...ACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp GGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGGCCGGGCGTGGTGCTTaGTGCGGAACAGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GEAAQRHCCHPGRWRTLRAGRGA*CGTGCS
Trigger: GCTGCAGCCTGTTCCGCACCAAGCACCACGCCCGGC...CCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp GCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGAGGTTCCCGGCTGGCTaGCGGGTGCGTCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: AQTHQHLASPASVPPRWQRFPAG*RVRPPS
Trigger: AGAGGGAGGACGCACCCGCCAGCCAGCCGGGAACCT...CTGCCACCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397088.4
CDS-3UTR CCA 90 bp TCCACAGAGGGGCCTTCCTGCTGCTCCGGGCCGAGCGCTGCTGCTCCTCGTGGGCACTCTCTGGGTACCTaGGTTGCAGCCCCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: STEGPSCCSGPSAAAPRGHSLGT*VAAPSV
Trigger: CACAGAAGGGGCTGCAACCCAGGTACCCAGAGAGTG...CCCACGAGGAGCAGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397088.4
ENST00000397092.5
CDS-3UTR TCA 90 bp CTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAACCAGCACCCGGACAATaGGGGAGTAGCACAGGCCGA +
Preference number: 4 (lower is better)
Translates to: LLLVGLVRPHSAIAAILEPAPGQ*GSSTGR
Trigger: TCGGCCTGTGCTACTCCCTCATTGTCCGGGTGCTGG...TTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CACCCCGGAGCAGACGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGTCTCCTGCTCATGGTTaGGGATTTCACAGTCTCGTG +
Preference number: 4 (lower is better)
Translates to: HPGADGGRSTEGPSCCSGSPAHG*GFHSLV
Trigger: CACGAGACTGTGAAATCCGCAACCATGAGCAGGAGA...CCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCGTCTGCTCCGGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297469.3
ENST00000397092.5
CDS-3UTR GCA 90 bp AGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCATTGGCCAGGGCGGTaGCCAGGAGCGGGTGGGACA +
Preference number: 4 (lower is better)
Translates to: RTHRDVQLRPTSTLHLQRHWPGR*PGAGGT
Trigger: TGTCCCACCCGCTCCTGGGCACCGCCCTGGCCAATG...ACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCTGGTGCGGAACAGGCTaGAGCGCATGGCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: VRPHSAIAAILEDGGRSGWCGTG*SAWPWP
Trigger: TGGCCAGGGCCATGCGCTGCAGCCTGTTCCGCACCA...GCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp TCAGACCGTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCATGGTGCGGAACAGGCTaGAGCGCATGGCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SDRGHRGHTATSSSDPPAWCGTG*SAWPWP
Trigger: TGGCCAGGGCCATGCGCTGCAGCCTGTTCCGCACCA...TGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCACGGTCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCACTCAGCCGGGCGTGGTaGTTGGTGCGGAACAGGCTG +
Preference number: 4 (lower is better)
Translates to: VGTEDTPRRPAQTHQHLALSRAW*LVRNRL
Trigger: CAGCCTGTTCCGCACCAAGCACCACGCCCGGCTGAG...TGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCGGTGTGCTGCAGGTaGACGGCGGTGAAGGGCACC +
Preference number: 4 (lower is better)
Translates to: VGTEDTPRRPAQTHQHLASVCCR*TAVKGT
Trigger: GGTGCCCTTCACCGCCGTGCACCTGCAGCACACCGA...TGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCGCCTCGTCGGTGTGCTaGAGGTGCACGGCGGTGAAG +
Preference number: 4 (lower is better)
Translates to: PRRPAQTHQHLASPASVPASSVC*RCTAVK
Trigger: CTTCACCGCCGTGCACCTGCAGCACACCGACGAGGC...GGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGCCTCGTCGGTGTGCTaGAGGTGCACGGCGGTGAAG +
Preference number: 4 (lower is better)
Translates to: VRPHSAIAAILEDGGRSGASSVC*RCTAVK
Trigger: CTTCACCGCCGTGCACCTGCAGCACACCGACGAGGC...GCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCAC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GCCTCTCCGTGTGGCTTTCCTGGTCGACGGTGTCAGAAATGTTTCCTGCAGCGGAGCCCACGGTGCCGGTaGGCCCTGACCAGCACCCGG +
Preference number: 4 (lower is better)
Translates to: ASPCGFPGRRCQKCFLQRSPRCR*ALTSTR
Trigger: CCGGGTGCTGGTCAGGGCGCACCGGCACCGTGGGCT...CCGCTGCAGGAAACATTTCTGACACCGTCGACCAGGAAAGCCACACGGAGAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp CTAACCCACACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGAGCCCACGGTGCCGGTaGGCCCTGACCAGCACCCGG +
Preference number: 4 (lower is better)
Translates to: LTHTAARTVPVHMSAIAMSPRCR*ALTSTR
Trigger: CCGGGTGCTGGTCAGGGCGCACCGGCACCGTGGGCT...CATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTGTGGGTTAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCCCAGGCTGCGTCCGCTaGAGGAGGTGCACGCTGATG +
Preference number: 4 (lower is better)
Translates to: GHRGHTATSSSDPPAPCIPGCVR*RRCTLM
Trigger: CATCAGCGTGCACCTCCTGCAGCGGACGCAGCCTGG...GATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCCCAGGCTGCGTCCGCTaGAGGAGGTGCACGCTGATG +
Preference number: 4 (lower is better)
Translates to: PGEAAQRHCCHPGRWRTLPGCVR*RRCTLM
Trigger: CATCAGCGTGCACCTCCTGCAGCGGACGCAGCCTGG...GAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCCTGGCCTTTGGACCCTaGGGGGCGAGCGCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: PRRPAQTHQHLASPASVPLAFGP*GASALG
Trigger: TCCCAAAGCGCTCGCCCCGCAGGGTCCAAAGGCCAG...GGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGATTTGCTGAGGGGCCTTCCTGCTaGTCCGGGCCGAGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: PTSTLHLQRQFPHGGRFAEGPSC*SGPSAA
Trigger: AGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTC...AGCAAATCTGCCACCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp CGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGGCTCACCTGTCCCATTaGCCAGGGCGGTGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: RPAQTHQHLASPASVPPRAHLSH*PGRCPG
Trigger: TCCTGGGCACCGCCCTGGCCAATGGGACAGGTGAGC...CCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp GTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCAACAGGCTGCAGCGCATaGCCCTGGCCAGGGCGATGT +
Preference number: 4 (lower is better)
Translates to: VGTEDTPRRPAQTHQHLATGCSA*PWPGRC
Trigger: ACATCGCCCTGGCCAGGGCCATGCGCTGCAGCCTGT...TGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp AGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGGCTGGTCACCGCTaGCCTTTGGACCCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: RTHRDVQLRPTSTLHLQRQAGHR*PLDPAG
Trigger: CCCCGCAGGGTCCAAAGGCCAGCGGTGACCAGCCTG...ACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp ACGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGCCGAGCGCTGCTGGTCAGCCACAGGTGCTaGAGTATTTCATTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: TAGAPQRGLPAAPGRALLVSHRC*SISLSW
Trigger: CCAGGACAATGAAATACTCCAGCACCTGTGGCTGAC...CAGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp CACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGCGGATGCCATCCAGATaGGGCCACAGCTCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: HSAIAAILEDGGRSGVHQRMPSR*GHSSAG
Trigger: CCCGGCTGAGCTGTGGCCTCATCTGGATGGCATCCG...CTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp CCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCGGGCACCAGCGTGGCTaGCACGGATGCCATCCAGAT +
Preference number: 4 (lower is better)
Translates to: PGEAAQRHCCHPGRWRTLGHQRG*HGCHPD
Trigger: ATCTGGATGGCATCCGTGTCAGCCACGCTGGTGCCC...GAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp AGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGGGGCACCAGCGTGGCTaGCACGGATGCCATCCAGAT +
Preference number: 4 (lower is better)
Translates to: RPHSAIAAILEDGGRSGVGHQRG*HGCHPD
Trigger: ATCTGGATGGCATCCGTGTCAGCCACGCTGGTGCCC...CACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp GCTAGCTCAGACCGTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCCGGACAATaGGGGAGTAGCACAGGCCGA +
Preference number: 4 (lower is better)
Translates to: ASSDRGHRGHTATSSSDPPAPGQ*GSSTGR
Trigger: TCGGCCTGTGCTACTCCCTCATTGTCCGGGTGCTGG...TGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCACGGTCTGAGCTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp GGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCCCAGCACCCGGACAATaGGGGAGTAGCACAGGCCGA +
Preference number: 4 (lower is better)
Translates to: GHRGHTATSSSDPPAPCIPAPGQ*GSSTGR
Trigger: TCGGCCTGTGCTACTCCCTCATTGTCCGGGTGCTGG...GATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp ACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCATCCTCGTGGGCCTGGTaGGGCCGCACAGCGCCATTG +
Preference number: 4 (lower is better)
Translates to: TEDTPRRPAQTHQHLASPSSWAW*GRTAPL
Trigger: CAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGA...TGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp CGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGCCGAGCGCTGCTGCGTGCAATTGCCATGTTaGTGTCAACAAGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: RRALHRGAFLLLRAERCCVQLPC*CQQAVT
Trigger: AGTCACTGCTTGTTGACATCAACATGGCAATTGCAC...GCAGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCACTCACACCGGCATGGTaGATCCGTGGAGGCGAGGGC +
Preference number: 4 (lower is better)
Translates to: DTPRRPAQTHQHLASPASLTPAW*IRGGEG
Trigger: GCCCTCGCCTCCACGGATGCACCATGCCGGTGTGAG...TGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp CCGGGCCGAGCGCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTCATGTCTCTGCACCGTaGAGCTTTCAAGATTTGCCG +
Preference number: 4 (lower is better)
Translates to: PGRALLLLVGLVRPHSAIHVSAP*SFQDLP
Trigger: CGGCAAATCTTGAAAGCTGCACGGTGCAGAGACATG...AATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGCGCTCGGCCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp ACGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGCCGAGCGCTGCTGTCACATCCATGTCTCTaGACCGTGCAGCTTTCAAGA +
Preference number: 4 (lower is better)
Translates to: TAGAPQRGLPAAPGRALLSHPCL*TVQLSR
Trigger: TCTTGAAAGCTGCACGGTGCAGAGACATGGATGTGA...CAGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CGACTAACCCACACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCTTGGGGGCCGCAGGCTaGGCGGTGCCTGGGTACATC +
Preference number: 4 (lower is better)
Translates to: RLTHTAARTVPVHMSAIALGAAG*AVPGYI
Trigger: GATGTACCCAGGCACCGCGCAGCCTGCGGCCCCCAA...GGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTGTGGGTTAGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp AGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCTCAGCCGGGCGTGGTaGTTGGTGCGGAACAGGCTG +
Preference number: 4 (lower is better)
Translates to: RTHRDVQLRPTSTLHLQRLSRAW*LVRNRL
Trigger: CAGCCTGTTCCGCACCAAGCACCACGCCCGGCTGAG...ACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGTTGATGTCATGCGGAGCGCCTTCTaGCGCCGGGGCCGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: HGSSHGPSPHECNCHVDVMRSAF*RRGRSP
Trigger: TGGGCTGCGGCCCCGGCGGCAGAAGGCGCTCCGCAT...GACATCAACATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGGGCGGAAAGACTGCTTaGAGGGAGCGGCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: HSAIAAILEDGGRSGVHQGGKTA*RERPQA
Trigger: AGCCTGGGGCCGCTCCCTGCAAGCAGTCTTTCCGCC...CTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GCTAGCTCAGACCGTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCAGTCCACCCAGGTGTGTaGAGCTCCCGAGTCACACCC +
Preference number: 4 (lower is better)
Translates to: ASSDRGHRGHTATSSSDPVHPGV*SSRVTP
Trigger: GGGTGTGACTCGGGAGCTGCACACACCTGGGTGGAC...TGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCACGGTCTGAGCTAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp GTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCAGTCCACCCAGGTGTGTaGAGCTCCCGAGTCACACCC +
Preference number: 4 (lower is better)
Translates to: VGTEDTPRRPAQTHQHLAVHPGV*SSRVTP
Trigger: GGGTGTGACTCGGGAGCTGCACACACCTGGGTGGAC...TGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp GGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCGACATGACGTGGCCGTaGCTTGTGTCCACCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GRTAPLLPSWKMEDAQACDMTWP*LVSTQV
Trigger: CACCTGGGTGGACACAAGGCACGGCCACGTCATGTC...GCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp CACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGTTGATGTCCTCCGGGCCGAGCGCTaGTGCTCCTCGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: HGSSHGPSPHECNCHVDVLRAER*CSSWAW
Trigger: CCAGGCCCACGAGGAGCAGCAGCGCTCGGCCCGGAG...GACATCAACATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGATTTGCTACAGAGGGGCCTTCCTaGTGCTCCGGGCCGAGCGCT +
Preference number: 4 (lower is better)
Translates to: PTSTLHLQRQFPHGGRFATEGPS*CSGPSA
Trigger: AGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGT...AGCAAATCTGCCACCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp ACGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGCCGAGCGCTGCTGTTCGTCAGCCACAGGTaGTGGAGTATTTCATTGTCC +
Preference number: 4 (lower is better)
Translates to: TAGAPQRGLPAAPGRALLFVSHR*WSISLS
Trigger: GGACAATGAAATACTCCAGCACCTGTGGCTGACGAA...CAGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GGCCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCGCTGGACCTGCCGAATaGCTGAGCAGGGCTAGAGAG +
Preference number: 4 (lower is better)
Translates to: GLVRPHSAIAAILEDGGRAGPAE*LSRARE
Trigger: CTCTCTAGCCCTGCTCAGGCATTCGGCAGGTCCAGC...GCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397088.4
CDS-3UTR CCA 90 bp GCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGCCGTCCAGATGTTGGTaGCCTCTTCCCCACCAGGGC +
Preference number: 4 (lower is better)
Translates to: AQTHQHLASPASVPPRWQPSRCW*PLPHQG
Trigger: GCCCTGGTGGGGAAGAGGCCACCAACATCTGGACGG...CTGCCACCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297469.3
ENST00000397092.5
CDS-3UTR CCA 90 bp GCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGGTGCACAGTCCCGCGTaGAGCTGCTCACTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: AQTHQHLASPASVPPRWQVHSPA*SCSLSG
Trigger: CCCAGAGAGTGAGCAGCTCCACGCGGGACTGTGCAC...CTGCCACCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp GCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGCTCCTCACACCGGCATaGTGCATCCGTGGAGGCGAG +
Preference number: 4 (lower is better)
Translates to: AQTHQHLASPASVPPRWQLLTPA*CIRGGE
Trigger: CTCGCCTCCACGGATGCACCATGCCGGTGTGAGGAG...CTGCCACCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp GCTCAGACCGTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCCCACGCCCCGGGCTTaGGAAGTCACATCCATGTCT +
Preference number: 4 (lower is better)
Translates to: AQTVGTEDTPRRPAQTHQPTPRA*EVTSMS
Trigger: AGACATGGATGTGACTTCCCAAGCCCGGGGCGTGGG...CTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCACGGTCTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp CACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGGCTGCGCGGTGCCTaGGTACATCTCCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: HSAIAAILEDGGRSGVHQRLRGA*VHLQAH
Trigger: GTGGGCCTGGAGATGTACCCAGGCACCGCGCAGCCT...CTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp CACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGGCTCACCTGTCCCATTaGCCAGGGCGGTGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: HSAIAAILEDGGRSGVHQAHLSH*PGRCPG
Trigger: TCCTGGGCACCGCCCTGGCCAATGGGACAGGTGAGC...CTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp CACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGACAGGCTGCAGCGCATaGCCCTGGCCAGGGCGATGT +
Preference number: 4 (lower is better)
Translates to: HSAIAAILEDGGRSGVHQTGCSA*PWPGRC
Trigger: ACATCGCCCTGGCCAGGGCCATGCGCTGCAGCCTGT...CTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp AGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGCTCAGCCGGGCGTaGTGCTTGGTGCGGAACAGG +
Preference number: 4 (lower is better)
Translates to: RTHRDVQLRPTSTLHLQRQLSRA*CLVRNR
Trigger: CCTGTTCCGCACCAAGCACCACGCCCGGCTGAGCTG...ACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp CACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGCAGCTCAGCCGGGCGTaGTGCTTGGTGCGGAACAGG +
Preference number: 4 (lower is better)
Translates to: HSAIAAILEDGGRSGVHQQLSRA*CLVRNR
Trigger: CCTGTTCCGCACCAAGCACCACGCCCGGCTGAGCTG...CTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp TCAGACCGTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCAGCGAGGTTGACAATGTaGCCCGTGAGGGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SDRGHRGHTATSSSDPPAARLTM*PVRGWA
Trigger: TGCCCACCCCCTCACGGGCCACATTGTCAACCTCGC...TGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCACGGTCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp GCCTCTCCGTGTGGCTTTCCTGGTCGACGGTGTCAGAAATGTTTCCTGCAGCGGGTCACCGCTGGCCTTTaGACCCTGCGGGGCGAGCGC +
Preference number: 4 (lower is better)
Translates to: ASPCGFPGRRCQKCFLQRVTAGL*TLRGER
Trigger: GCGCTCGCCCCGCAGGGTCCAAAGGCCAGCGGTGAC...CCGCTGCAGGAAACATTTCTGACACCGTCGACCAGGAAAGCCACACGGAGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp CATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAGCATGTCACCGCTGGCCTTTaGACCCTGCGGGGCGAGCGC +
Preference number: 4 (lower is better)
Translates to: HCCHPGRWRTLRRAPEQHVTAGL*TLRGER
Trigger: GCGCTCGCCCCGCAGGGTCCAAAGGCCAGCGGTGAC...ATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp CACCCCGGAGCAGACGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGAGTATTTCATTGTCCTaGCACCCGACTAACCCACAC +
Preference number: 4 (lower is better)
Translates to: HPGADGGRSTEGPSCCSGSISLS*HPTNPH
Trigger: GTGTGGGTTAGTCGGGTGCCAGGACAATGAAATACT...CCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCGTCTGCTCCGGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp GGCCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCCCATCAGGCTaGAGGTGCACTTGGAACCCG +
Preference number: 4 (lower is better)
Translates to: GLVRPHSAIAAILEDGGRSGPSG*RCTWNP
Trigger: CGGGTTCCAAGTGCACCTCCAGCCTGATGGGCCTGA...GCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397088.4
ENST00000397092.5
CDS-3UTR TCA 90 bp CTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAGCATGTTTTGACTCTCGGGGCCGCTaGACTGCCTCATGCGGGGCG +
Preference number: 4 (lower is better)
Translates to: LPSWKMEDAQACTRAACFDSRGR*TASCGA
Trigger: CGCCCCGCATGAGGCAGTTCAGCGGCCCCGAGAGTC...AAAACATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297469.3
ENST00000397092.5
CDS-3UTR TCA 90 bp CATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAGCATGCGGGTGGGACAGGTTaGGCTCGGGGGAGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: HCCHPGRWRTLRRAPEQHAGGTG*ARGRWC
Trigger: ACACCACCTCCCCCGAGCTCAACCTGTCCCACCCGC...ATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp CCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCGCAGGAAGAGCGACATaGAGGTGCACAGGACGGCGA +
Preference number: 4 (lower is better)
Translates to: PGEAAQRHCCHPGRWRTLAGRAT*RCTGRR
Trigger: TCGCCGTCCTGTGCACCTTCATGTCGCTCTTCCTGC...GAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp GTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGCAGGAAGAGCGACATaGAGGTGCACAGGACGGCGA +
Preference number: 4 (lower is better)
Translates to: VRPHSAIAAILEDGGRSGAGRAT*RCTGRR
Trigger: TCGCCGTCCTGTGCACCTTCATGTCGCTCTTCCTGC...GCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCAC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp CTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAGCATGTTTTGCAGGTGCACGGCGGTaGAGGGCACCAGCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LPSWKMEDAQACTRAACFAGARR*RAPAWL
Trigger: CAGCCACGCTGGTGCCCTTCACCGCCGTGCACCTGC...AAAACATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp AGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGGCCTCAGCTTGTCCCTaGAGGTCTCCCCGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: RPHSAIAAILEDGGRSGVASACP*RSPRES
Trigger: GCTTTCTCGGGGAGACCTTCAGGGACAAGCTGAGGC...CACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR TCA 90 bp CTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAGCATGTTTTGTGACCAGGCAAGCGTaGCCCTCGCGAGGCCCCGAG +
Preference number: 4 (lower is better)
Translates to: LPSWKMEDAQACTRAACFVTRQA*PSRGPE
Trigger: CTCGGGGCCTCGCGAGGGTCACGCTTGCCTGGTCAC...AAAACATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp GGCCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCGGGTTCCTGTGTAACTaGGGCGCTTCACCCACAGTG +
Preference number: 4 (lower is better)
Translates to: GLVRPHSAIAAILEDGGRGFLCN*GASPTV
Trigger: CACTGTGGGTGAAGCGCCTCAGTTACACAGGAACCC...GCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp GGCCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAACAAGCAGTGACTaGACCACCCCGGAGCAGACG +
Preference number: 4 (lower is better)
Translates to: GLVRPHSAIAAILEDGGRSTSSD*TTPEQT
Trigger: CGTCTGCTCCGGGGTGGTTCAGTCACTGCTTGTTGA...GCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp ACGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGCCGAGCGCTGCTGGTGCAATTGCCATGTTaGTGTCAACAAGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: TAGAPQRGLPAAPGRALLVQLPC*CQQAVT
Trigger: AGTCACTGCTTGTTGACATCAACATGGCAATTGCAC...CAGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp TGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAGCATGTTTTCTCGGGGCCGCTGAACTaGCTCATGCGGGGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: CHPGRWRTLRRAPEQHVFSGPLN*LMRGGH
Trigger: GTGGCCGCCCCGCATGAGGCAGTTCAGCGGCCCCGA...GAAAACATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297469.3
ENST00000397092.5
CDS-3UTR GCA 90 bp CCGGGCCGAGCGCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTGATTTCACAGTCTCGTaGAGGCGGAGAATAAACCTC +
Preference number: 4 (lower is better)
Translates to: PGRALLLLVGLVRPHSAIDFTVS*RRRINL
Trigger: GAGGTTTATTCTCCGCCTGCACGAGACTGTGAAATC...AATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGCGCTCGGCCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297469.3
ENST00000397092.5
CDS-3UTR GCA 90 bp CATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAGCATTTGGGGGCCGCAGGCTaGGCGGTGCCTGGGTACATC +
Preference number: 4 (lower is better)
Translates to: HCCHPGRWRTLRRAPEQHLGAAG*AVPGYI
Trigger: GATGTACCCAGGCACCGCGCAGCCTGCGGCCCCCAA...ATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCGACATGACGTGGCCGTaGCTTGTGTCCACCCAGGTG +
Preference number: 4 (lower is better)
Translates to: PGEAAQRHCCHPGRWRTLDMTWP*LVSTQV
Trigger: CACCTGGGTGGACACAAGGCACGGCCACGTCATGTC...GAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp TGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAGCATGTTTTCGAGGGGCCTTCCTGCTaGTCCGGGCCGAGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: CHPGRWRTLRRAPEQHVFEGPSC*SGPSAA
Trigger: AGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTC...GAAAACATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCTACCTCTGCTGGACCTaGCGAATGCCTGAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GHRGHTATSSSDPPAPCIYLCWT*RMPEQG
Trigger: GCCCTGCTCAGGCATTCGGCAGGTCCAGCAGAGGTA...GATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp CGACTAACCCACACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCGACATGACGTGGCCGTaGGTGAGGGGGTGGGCATGG +
Preference number: 4 (lower is better)
Translates to: RLTHTAARTVPVHMSAIADMTWP*VRGWAW
Trigger: CCATGCCCACCCCCTCACGCACGGCCACGTCATGTC...GGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTGTGGGTTAGTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617001.1
CDS-3UTR CCA 90 bp GTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCCTCCAGGCGGAGGGGTaGGTCTTCCTCAGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: VRPHSAIAAILEDGGRSGLQAEG*VFLRRE
Trigger: TTCCCTTCTGAGGAAGACCCACCCCTCCGCCTGGAG...GCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297469.3
ENST00000397092.5
CDS-3UTR CCA 90 bp CCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCCTCCAGGCGGAGGGGTaGGTCTTCCTCAGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: PRRPAQTHQHLASPASVPLQAEG*VFLRRE
Trigger: TTCCCTTCTGAGGAAGACCCACCCCTCCGCCTGGAG...GGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297469.3
ENST00000397092.5
CDS-3UTR CCA 90 bp CTAGCTAGCTCAGACCGTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCTCCTCACACCGGCATaGTGCATCCGTGGAGGCGAG +
Preference number: 4 (lower is better)
Translates to: LASSDRGHRGHTATSSSDLLTPA*CIRGGE
Trigger: CTCGCCTCCACGGATGCACCATGCCGGTGTGAGGAG...GTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCACGGTCTGAGCTAGCTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp ACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCTCACCTGTCCCATTaGCCAGGGCGGTGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: TEDTPRRPAQTHQHLASPAHLSH*PGRCPG
Trigger: TCCTGGGCACCGCCCTGGCCAATGGGACAGGTGAGC...TGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp CCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGATTTGCTCAGCTCAGCCGGGCGTaGTGCTTGGTGCGGAACAGG +
Preference number: 4 (lower is better)
Translates to: PTSTLHLQRQFPHGGRFAQLSRA*CLVRNR
Trigger: CCTGTTCCGCACCAAGCACCACGCCCGGCTGAGCTG...AGCAAATCTGCCACCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp GTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCAGTGAGGGGGTGGGCATaGCGGAAAGACTGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: VGTEDTPRRPAQTHQHLAVRGWA*RKDCLQ
Trigger: CTGCAAGCAGTCTTTCCGCCATGCCCACCCCCTCAC...TGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp CCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGATTTGCTTGGCCCGTGAGGGGGTaGGCATGGCGGAAAGACTGC +
Preference number: 4 (lower is better)
Translates to: PTSTLHLQRQFPHGGRFAWPVRG*AWRKDC
Trigger: GCAGTCTTTCCGCCATGCCCACCCCCTCACGGGCCA...AGCAAATCTGCCACCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp GGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCTGCTCGGTGCTGTCTaGAATGACGGCCTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: GEAAQRHCCHPGRWRTLRLLGAV*NDGLQG
Trigger: GCCCTGAAGGCCGTCATTCCAGACAGCACCGAGCAG...CCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp GCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGATTTGCTTTAGGGTTCCTGTGGTCACCGCTGGCCTTTaGACCCTGCGGGGCGAGCGC +
Preference number: 4 (lower is better)
Translates to: ASPASVPPRWQICFRVPVVTAGL*TLRGER
Trigger: GCGCTCGCCCCGCAGGGTCCAAAGGCCAGCGGTGAC...CACAGGAACCCTAAAGCAAATCTGCCACCGTGGGGGAACTGACGCTGGAGATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp GTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCAAGTGGCCTCTCCGTGTaGCTTTCCTGGTCGACGGTG +
Preference number: 4 (lower is better)
Translates to: VGTEDTPRRPAQTHQHLASGLSV*LSWSTV
Trigger: CACCGTCGACCAGGAAAGCCACACGGAGAGGCCACT...TGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp TCCACAGAGGGGCCTTCCTGCTGCTCCGGGCCGAGCGCTGCTGCTCCTCGTGGGTCAGTTCCCCCACGGTaGCAGATTTGCTTTAGGGTT +
Preference number: 4 (lower is better)
Translates to: STEGPSCCSGPSAAAPRGSVPPR*QICFRV
Trigger: AACCCTAAAGCAAATCTGCCACCGTGGGGGAACTGA...CCCACGAGGAGCAGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp GCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTCCATTGCTGCCATCCTaGAAGATGGAGGACGCTCAG +
Preference number: 4 (lower is better)
Translates to: AAAPRGPGEAAQRHCCHPPLLPS*KMEDAQ
Trigger: CTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGG...AGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp GGCCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCCACTCTCTGGGTACCTaGGTTGCAGCCCCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: GLVRPHSAIAAILEDGGRHSLGT*VAAPSV
Trigger: CACAGAAGGGGCTGCAACCCAGGTACCCAGAGAGTG...GCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397088.4
ENST00000397092.5
CDS-3UTR TCA 90 bp GCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGATTTGCTTTAGGGTTCCTGTGGCGGGTGGGACAGGTTaGGCTCGGGGGAGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: ASPASVPPRWQICFRVPVAGGTG*ARGRWC
Trigger: ACACCACCTCCCCCGAGCTCAACCTGTCCCACCCGC...CACAGGAACCCTAAAGCAAATCTGCCACCGTGGGGGAACTGACGCTGGAGATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp GCCTCTCCGTGTGGCTTTCCTGGTCGACGGTGTCAGAAATGTTTCCTGCAGCGGCGGATGCCATCCAGATaGGGCCACAGCTCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: ASPCGFPGRRCQKCFLQRRMPSR*GHSSAG
Trigger: CCCGGCTGAGCTGTGGCCTCATCTGGATGGCATCCG...CCGCTGCAGGAAACATTTCTGACACCGTCGACCAGGAAAGCCACACGGAGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR TCA 90 bp CCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGATTTGCTCCAGCACCCGGACAATaGGGGAGTAGCACAGGCCGA +
Preference number: 4 (lower is better)
Translates to: PTSTLHLQRQFPHGGRFAPAPGQ*GSSTGR
Trigger: TCGGCCTGTGCTACTCCCTCATTGTCCGGGTGCTGG...AGCAAATCTGCCACCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp CACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGGCCTCAGCTTGTCCCTaGAGGTCTCCCCGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: HSAIAAILEDGGRSGVHQASACP*RSPRES
Trigger: GCTTTCTCGGGGAGACCTTCAGGGACAAGCTGAGGC...CTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR TCA 90 bp CACCGCTGGCCTTTGGACCCTGCGGGGCGAGCGCTTTGGGATTGTAGCAATTCTCGGTGCTGTCTGGAATaGCGGCCTTCAGGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: HRWPLDPAGRALWDCSNSRCCLE*RPSGQR
Trigger: ACGCTGCCCTGAAGGCCGTCATTCCAGACAGCACCG...AGAATTGCTACAATCCCAAAGCGCTCGCCCCGCAGGGTCCAAAGGCCAGCGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR TCA 90 bp GCTCAGACCGTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGTCTACACGGCACTGCTaGACCTCACATCCGACTGCT +
Preference number: 4 (lower is better)
Translates to: AQTVGTEDTPRRPAQTHQSTRHC*TSHPTA
Trigger: AGCAGTCGGATGTGAGGTTCAGCAGTGCCGTGTAGA...CTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCACGGTCTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR TCA 90 bp CAGGCTGGTCACCGCTGGCCTTTGGACCCTGCGGGGCGAGCGCTTTGGGATTGTCGCAGTTTAGAGACATaGCGTGGCCGTGCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: QAGHRWPLDPAGRALWDCRSLET*RGRALC
Trigger: ACACAAGGCACGGCCACGTCATGTCTCTAAACTGCG...ACAATCCCAAAGCGCTCGCCCCGCAGGGTCCAAAGGCCAGCGGTGACCAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR TCA 90 bp GCTAGCTCAGACCGTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACAAGGTGACCAGTCGTaGGGTTTCCTAAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: ASSDRGHRGHTATSSSDPQGDQS*GFLSSP
Trigger: GGGGCTGCTTAGGAAACCTCACGACTGGTCACCTTG...TGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCACGGTCTGAGCTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp CTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAGCATGTTTTTCCTCGTGGGCCTGGTaGGGCCGCACAGCGCCATTG +
Preference number: 4 (lower is better)
Translates to: LPSWKMEDAQACTRAACFSSWAW*GRTAPL
Trigger: CAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGA...AAAACATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCAGGGCCGCCTCTCCTaGTCATGGTTGCGGATTTCA +
Preference number: 4 (lower is better)
Translates to: GEAAQRHCCHPGRWRTLRQGRLS*SWLRIS
Trigger: TGAAATCCGCAACCATGAGCAGGAGAGGCGGCCCTG...CCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297469.3
ENST00000397092.5
CDS-3UTR GCA 90 bp CTCTCCGTGTGGCTTTCCTGGTCGACGGTGTCAGAAATGTTTCCTGCAGCGGCACCGCAGGCTGCGCGGTaGCTGGGTACATCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LSVWLSWSTVSEMFPAAAPQAAR*LGTSPG
Trigger: GCCTGGAGATGTACCCAGGCACCGCGCAGCCTGCGG...TGCCGCTGCAGGAAACATTTCTGACACCGTCGACCAGGAAAGCCACACGGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp TGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAGCATGTTTTCTTGGGGGCCGCAGGCTaGGCGGTGCCTGGGTACATC +
Preference number: 4 (lower is better)
Translates to: CHPGRWRTLRRAPEQHVFLGAAG*AVPGYI
Trigger: GATGTACCCAGGCACCGCGCAGCCTGCGGCCCCCAA...GAAAACATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGATTTGCTTTAGGGTTCCTGTGCATTGGCCAGGGCGGTaGCCAGGAGCGGGTGGGACA +
Preference number: 4 (lower is better)
Translates to: ASPASVPPRWQICFRVPVHWPGR*PGAGGT
Trigger: TGTCCCACCCGCTCCTGGGCACCGCCCTGGCCAATG...CACAGGAACCCTAAAGCAAATCTGCCACCGTGGGGGAACTGACGCTGGAGATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GGCCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCATCACGTACTGCTGGTaGTCCGAGAGCTCACCTGTC +
Preference number: 4 (lower is better)
Translates to: GLVRPHSAIAAILEDGGRITYCW*SESSPV
Trigger: GACAGGTGAGCTCTCGGAGCACCAGCAGTACGTGAT...GCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCAGGCCGATCACGTACTaGTGGTGCTCCGAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: PRRPAQTHQHLASPASVPRPITY*WCSESS
Trigger: TGAGCTCTCGGAGCACCAGCAGTACGTGATCGGCCT...GGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CGTGTGGCTTTCCTGGTCGACGGTGTCAGAAATGTTTCCTGCAGCGGCAGGCAGGCCTCGTCGGTGTGCTaGAGGTGCACGGCGGTGAAG +
Preference number: 4 (lower is better)
Translates to: RVAFLVDGVRNVSCSGRQASSVC*RCTAVK
Trigger: CTTCACCGCCGTGCACCTGCAGCACACCGACGAGGC...CTGCCTGCCGCTGCAGGAAACATTTCTGACACCGTCGACCAGGAAAGCCACACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp GCTGGCCTTTGGACCCTGCGGGGCGAGCGCTTTGGGATTGTAGCAATTCTGTGTGTGACCTCGAGCCACTaGACCTCCCGGACATCCGCG +
Preference number: 4 (lower is better)
Translates to: AGLWTLRGERFGIVAILCVTSSH*TSRTSA
Trigger: CGCGGATGTCCGGGAGGTGCAGTGGCTCGAGGTCAC...ACACAGAATTGCTACAATCCCAAAGCGCTCGCCCCGCAGGGTCCAAAGGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp GCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGTTGATGTCAACAAGCATGCGGAGCGCCTTCTaGCGCCGGGGCCGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: ARTVPVHMSAIAMLMSTSMRSAF*RRGRSP
Trigger: TGGGCTGCGGCCCCGGCGGCAGAAGGCGCTCCGCAT...GCTTGTTGACATCAACATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCGTCCGCTGCAGGAGGTaGACGCTGATGAAGACGTTC +
Preference number: 4 (lower is better)
Translates to: GHRGHTATSSSDPPAPCIVRCRR*TLMKTF
Trigger: GAACGTCTTCATCAGCGTGCACCTCCTGCAGCGGAC...GATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGGTCCGCTGCAGGAGGTaGACGCTGATGAAGACGTTC +
Preference number: 4 (lower is better)
Translates to: AQTHQHLASPASVPPRWQVRCRR*TLMKTF
Trigger: GAACGTCTTCATCAGCGTGCACCTCCTGCAGCGGAC...CTGCCACCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GCTGGCCTTTGGACCCTGCGGGGCGAGCGCTTTGGGATTGTAGCAATTCTGTGTCCAGGCTGCGTCCGCTaGAGGAGGTGCACGCTGATG +
Preference number: 4 (lower is better)
Translates to: AGLWTLRGERFGIVAILCPGCVR*RRCTLM
Trigger: CATCAGCGTGCACCTCCTGCAGCGGACGCAGCCTGG...ACACAGAATTGCTACAATCCCAAAGCGCTCGCCCCGCAGGGTCCAAAGGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp CTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGTCAGAAATGTTTCCTaGAGCGGCAGGCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: LLLVGLVRPHSAIAAILEVRNVS*SGRQVQ
Trigger: CTGCACCTGCCTGCCGCTGCAGGAAACATTTCTGAC...TTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp AGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGATTTGCTTTAGGGACAGAGGGGCCTTCCTaGTGCTCCGGGCCGAGCGCT +
Preference number: 4 (lower is better)
Translates to: STLHLQRQFPHGGRFALGTEGPS*CSGPSA
Trigger: AGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGT...CCCTAAAGCAAATCTGCCACCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGCCGAGCGCTGCTGCTCCTCGTGTTCGTCAGCCACAGGTaGTGGAGTATTTCATTGTCC +
Preference number: 4 (lower is better)
Translates to: APQRGLPAAPGRALLLLVFVSHR*WSISLS
Trigger: GGACAATGAAATACTCCAGCACCTGTGGCTGACGAA...CACGAGGAGCAGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACTTGGAACCCGCTaGAGGAGGTGTACCTCTGCT +
Preference number: 4 (lower is better)
Translates to: EAAQRHCCHPGRWRTLRRALGTR*RRCTSA
Trigger: AGCAGAGGTACACCTCCTGCAGCGGGTTCCAAGTGC...ACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp GGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCTTGCAGCCCCTTCTGTaGTCCTGGAAGCCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GHRGHTATSSSDPPAPCILQPLL*SWKPPW
Trigger: CCAAGGAGGCTTCCAGGAGCACAGAAGGGGCTGCAA...GATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp CACCGCTGGCCTTTGGACCCTGCGGGGCGAGCGCTTTGGGATTGTAGCAATTCTGTGCACAGTCCCGCGTaGAGCTGCTCACTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: HRWPLDPAGRALWDCSNSVHSPA*SCSLSG
Trigger: CCCAGAGAGTGAGCAGCTCCACGCGGGACTGTGCAC...AGAATTGCTACAATCCCAAAGCGCTCGCCCCGCAGGGTCCAAAGGCCAGCGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp GGCCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCCAGGAGGAGCACCTGTaGTGGTTTGGGTTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: GLVRPHSAIAAILEDGGRQEEHL*WFGLGL
Trigger: CAAACCCAACCCAAACCACCACAGGTGCTCCTCCTG...GCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp CGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGCCGATCACGTACTGCTaGTGCTCCGAGAGCTCACCT +
Preference number: 4 (lower is better)
Translates to: RPAQTHQHLASPASVPPRPITYC*CSESSP
Trigger: AGGTGAGCTCTCGGAGCACCAGCAGTACGTGATCGG...CCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp GTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCCCGATCACGTACTGCTaGTGCTCCGAGAGCTCACCT +
Preference number: 4 (lower is better)
Translates to: VRPHSAIAAILEDGGRSGPITYC*CSESSP
Trigger: AGGTGAGCTCTCGGAGCACCAGCAGTACGTGATCGG...GCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp TCAGACCGTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCGATCACGTACTGCTaGTGCTCCGAGAGCTCACCT +
Preference number: 4 (lower is better)
Translates to: SDRGHRGHTATSSSDPPAPITYC*CSESSP
Trigger: AGGTGAGCTCTCGGAGCACCAGCAGTACGTGATCGG...TGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCACGGTCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp GGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCAGTACAGGTCGGGGATaGTCATCTTCTCGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: GRTAPLLPSWKMEDAQACSTGRG*SSSRGS
Trigger: GCTTCCGCGAGAAGATGACCATCCCCGACCTGTACT...GCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp CACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGTTGATGTCGCCGGGCGTGGTGCTTaGTGCGGAACAGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: HGSSHGPSPHECNCHVDVAGRGA*CGTGCS
Trigger: GCTGCAGCCTGTTCCGCACCAAGCACCACGCCCGGC...GACATCAACATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp CTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAGCATGTTTTGCCGGGCGTGGTGCTTaGTGCGGAACAGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LPSWKMEDAQACTRAACFAGRGA*CGTGCS
Trigger: GCTGCAGCCTGTTCCGCACCAAGCACCACGCCCGGC...AAAACATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp ACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGAGTCACACCCTGGCTaGGCCTATGCGGCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: TEDTPRRPAQTHQHLASPESHPG*AYAAKA
Trigger: AGCCTTGGCCGCATAGGCCCAGCCAGGGTGTGACTC...TGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp CACACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGTTGATGCAGGCTGGTCACCGCTaGCCTTTGGACCCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: HTAARTVPVHMSAIAMLMQAGHR*PLDPAG
Trigger: CCCCGCAGGGTCCAAAGGCCAGCGGTGACCAGCCTG...CATCAACATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp GCTAGCTCAGACCGTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCATGCCATCCTGGAAGATaGAGGACGCTCAGGCGTGCA +
Preference number: 4 (lower is better)
Translates to: ASSDRGHRGHTATSSSDPCHPGR*RTLRRA
Trigger: TGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCA...TGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCACGGTCTGAGCTAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp GTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGAGGTGTACCTCTGCTaGACCTGCCGAATGCCTGAG +
Preference number: 4 (lower is better)
Translates to: VRPHSAIAAILEDGGRSGEVYLC*TCRMPE
Trigger: CTCAGGCATTCGGCAGGTCCAGCAGAGGTACACCTC...GCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCAC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp GTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCTTTAGAGACATGACGTaGCCGTGCGTGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: VRPHSAIAAILEDGGRSGFRDMT*PCVRGW
Trigger: CCACCCCCTCACGCACGGCCACGTCATGTCTCTAAA...GCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617001.1
CDS-3UTR TCA 90 bp TCAGACCGTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACGCTGCTGTACATGTTaGCCTGCAGGAAGAGCGACA +
Preference number: 4 (lower is better)
Translates to: SDRGHRGHTATSSSDPPARCCTC*PAGRAT
Trigger: TGTCGCTCTTCCTGCAGGTCAACATGTACAGCAGCG...TGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCACGGTCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp GAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTCGCTGCTGTACATGTTaGCCTGCAGGAAGAGCGACA +
Preference number: 4 (lower is better)
Translates to: EAAQRHCCHPGRWRTLRRRCCTC*PAGRAT
Trigger: TGTCGCTCTTCCTGCAGGTCAACATGTACAGCAGCG...ACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp AGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCGAAGCTCATCCAGGTaGGGAAGAAGACGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: RPHSAIAAILEDGGRSGVRSSSR*GRRRCC
Trigger: ACAGCAGCGTCTTCTTCCTCACCTGGATGAGCTTCG...CACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp GCTGGCCTTTGGACCCTGCGGGGCGAGCGCTTTGGGATTGTAGCAATTCTGTGTCGGTGCTGTCTGGAATaGCGGCCTTCAGGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: AGLWTLRGERFGIVAILCRCCLE*RPSGQR
Trigger: ACGCTGCCCTGAAGGCCGTCATTCCAGACAGCACCG...ACACAGAATTGCTACAATCCCAAAGCGCTCGCCCCGCAGGGTCCAAAGGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR TCA 90 bp GGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGCAGTTTAGAGACATaGCGTGGCCGTGCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: GEAAQRHCCHPGRWRTLRRSLET*RGRALC
Trigger: ACACAAGGCACGGCCACGTCATGTCTCTAAACTGCG...CCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR TCA 90 bp CTAGCTAGCTCAGACCGTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCAAGGTGACCAGTCGTaGGGTTTCCTAAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LASSDRGHRGHTATSSSDQGDQS*GFLSSP
Trigger: GGGGCTGCTTAGGAAACCTCACGACTGGTCACCTTG...GTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCACGGTCTGAGCTAGCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp CGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGGATGTCAACAAGCAGTaGCTGAACCACCCCGGAGCA +
Preference number: 4 (lower is better)
Translates to: RPAQTHQHLASPASVPPRDVNKQ*LNHPGA
Trigger: TGCTCCGGGGTGGTTCAGTCACTGCTTGTTGACATC...CCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GCTGGCCTTTGGACCCTGCGGGGCGAGCGCTTTGGGATTGTAGCAATTCTGTGTGCGGCCACTTCCGAGTaGGCCCCCTACTGGCCATTT +
Preference number: 4 (lower is better)
Translates to: AGLWTLRGERFGIVAILCAATSE*APYWPF
Trigger: AAATGGCCAGTAGGGGGCGCACTCGGAAGTGGCCGC...ACACAGAATTGCTACAATCCCAAAGCGCTCGCCCCGCAGGGTCCAAAGGCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297469.3
ENST00000397092.5
CDS-3UTR GCA 90 bp TCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACCCACGGGTGTCGGCCACCGTaGACAGTCCCGCGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: SSATGAGVFHCPGTRLTHGCRPP*TVPRGA
Trigger: AGCTCCACGCGGGACTGTGCACGGTGGCCGACACCC...GTGGGTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp GCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTCATGTCTCTGCACCGTaGAGCTTTCAAGATTTGCCG +
Preference number: 4 (lower is better)
Translates to: AAAPRGPGEAAQRHCCHPHVSAP*SFQDLP
Trigger: CGGCAAATCTTGAAAGCTGCACGGTGCAGAGACATG...AGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp TCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACCCACCATTGGCCAGGGCGGTaGCCAGGAGCGGGTGGGACA +
Preference number: 4 (lower is better)
Translates to: SSATGAGVFHCPGTRLTHHWPGR*PGAGGT
Trigger: TGTCCCACCCGCTCCTGGGCACCGCCCTGGCCAATG...GTGGGTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCATCACGTACTGCTGGTaGTCCGAGAGCTCACCTGTC +
Preference number: 4 (lower is better)
Translates to: PGEAAQRHCCHPGRWRTLITYCW*SESSPV
Trigger: GACAGGTGAGCTCTCGGAGCACCAGCAGTACGTGAT...GAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCATCACGTACTGCTGGTaGTCCGAGAGCTCACCTGTC +
Preference number: 4 (lower is better)
Translates to: GHRGHTATSSSDPPAPCIITYCW*SESSPV
Trigger: GACAGGTGAGCTCTCGGAGCACCAGCAGTACGTGAT...GATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCCCAGGATCAGGATGTTaGCCACAAAGCCGATGGGGA +
Preference number: 4 (lower is better)
Translates to: PGEAAQRHCCHPGRWRTLPGSGC*PQSRWG
Trigger: TCCCCATCGGCTTTGTGGGCAACATCCTGATCCTGG...GAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp AGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCCAGGATCAGGATGTTaGCCACAAAGCCGATGGGGA +
Preference number: 4 (lower is better)
Translates to: RPHSAIAAILEDGGRSGVPGSGC*PQSRWG
Trigger: TCCCCATCGGCTTTGTGGGCAACATCCTGATCCTGG...CACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp TGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAGCATGTTTTCTGGTGCGGAACAGGCTaGAGCGCATGGCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: CHPGRWRTLRRAPEQHVFWCGTG*SAWPWP
Trigger: TGGCCAGGGCCATGCGCTGCAGCCTGTTCCGCACCA...GAAAACATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CACACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGTTGATGCTCAGCCGGGCGTGGTaGTTGGTGCGGAACAGGCTG +
Preference number: 4 (lower is better)
Translates to: HTAARTVPVHMSAIAMLMLSRAW*LVRNRL
Trigger: CAGCCTGTTCCGCACCAAGCACCACGCCCGGCTGAG...CATCAACATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAGCATGTTTTCTCAGCCGGGCGTGGTaGTTGGTGCGGAACAGGCTG +
Preference number: 4 (lower is better)
Translates to: LPSWKMEDAQACTRAACFLSRAW*LVRNRL
Trigger: CAGCCTGTTCCGCACCAAGCACCACGCCCGGCTGAG...AAAACATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp ACCCTGCGGGGCGAGCGCTTTGGGATTGTAGCAATTCTGTGTGAGGAGTGCAAGTCGGTGTGCTGCAGGTaGACGGCGGTGAAGGGCACC +
Preference number: 4 (lower is better)
Translates to: TLRGERFGIVAILCEECKSVCCR*TAVKGT
Trigger: GGTGCCCTTCACCGCCGTGCACCTGCAGCACACCGA...CTTGCACTCCTCACACAGAATTGCTACAATCCCAAAGCGCTCGCCCCGCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp CTCTCCGTGTGGCTTTCCTGGTCGACGGTGTCAGAAATGTTTCCTGCAGCGGCAGCCTCGTCGGTGTGCTaGAGGTGCACGGCGGTGAAG +
Preference number: 4 (lower is better)
Translates to: LSVWLSWSTVSEMFPAAAASSVC*RCTAVK
Trigger: CTTCACCGCCGTGCACCTGCAGCACACCGACGAGGC...TGCCGCTGCAGGAAACATTTCTGACACCGTCGACCAGGAAAGCCACACGGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp GCTCAGACCGTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGAACCTCACATCCGACTaGTCGGTGCTGTCTGGAATG +
Preference number: 4 (lower is better)
Translates to: AQTVGTEDTPRRPAQTHQNLTSD*SVLSGM
Trigger: CATTCCAGACAGCACCGAGCAGTCGGATGTGAGGTT...CTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCACGGTCTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp GGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCGTCAGAAATGTTTCCTaGAGCGGCAGGCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GHRGHTATSSSDPPAPCIVRNVS*SGRQVQ
Trigger: CTGCACCTGCCTGCCGCTGCAGGAAACATTTCTGAC...GATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCAGAGGACGCTCAGGCGTaGACCAGAGCAGCATGTTTT +
Preference number: 4 (lower is better)
Translates to: VGTEDTPRRPAQTHQHLAEDAQA*TRAACF
Trigger: AAAACATGCTGCTCTGGTGCACGCCTGAGCGTCCTC...TGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp ACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCACCATCAGGCTGGAGGTaGACTTGGAACCCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: TEDTPRRPAQTHQHLASPPSGWR*TWNPLQ
Trigger: CTGCAGCGGGTTCCAAGTGCACCTCCAGCCTGATGG...TGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp AGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGATTTGCTTTAGGGCGCTTCGGGAACCGATaGCCGCCCCATGAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: STLHLQRQFPHGGRFALGRFGNR*PPHEGR
Trigger: TCTGCCCTCATGGGGCGGCCATCGGTTCCCGAAGCG...CCCTAAAGCAAATCTGCCACCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297469.3
ENST00000397092.5
CDS-3UTR CCA 90 bp CCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCCAGGAGGAGCACCTGTaGTGGTTTGGGTTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: PGEAAQRHCCHPGRWRTLQEEHL*WFGLGL
Trigger: CAAACCCAACCCAAACCACCACAGGTGCTCCTCCTG...GAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp ACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCACCCACGCCCCGGGCTTaGGAAGTCACATCCATGTCT +
Preference number: 4 (lower is better)
Translates to: TEDTPRRPAQTHQHLASPPTPRA*EVTSMS
Trigger: AGACATGGATGTGACTTCCCAAGCCCGGGGCGTGGG...TGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp AGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGATTTGCTTTAGGGAGGCTGCGCGGTGCCTaGGTACATCTCCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: STLHLQRQFPHGGRFALGRLRGA*VHLQAH
Trigger: GTGGGCCTGGAGATGTACCCAGGCACCGCGCAGCCT...CCCTAAAGCAAATCTGCCACCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp CACACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGTTGATGGCTCACCTGTCCCATTaGCCAGGGCGGTGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: HTAARTVPVHMSAIAMLMAHLSH*PGRCPG
Trigger: TCCTGGGCACCGCCCTGGCCAATGGGACAGGTGAGC...CATCAACATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp GGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCTGCCCACAAAGCCGATaGGGAAGAGGAAGATGGTGT +
Preference number: 4 (lower is better)
Translates to: GRTAPLLPSWKMEDAQACCPQSR*GRGRWC
Trigger: ACACCATCTTCCTCTTCCCCATCGGCTTTGTGGGCA...GCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp CACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGTTGATGTCTGCAGCGCATGGCCCTaGCCAGGGCGATGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: HGSSHGPSPHECNCHVDVCSAWP*PGRCSG
Trigger: ACCGCTACATCGCCCTGGCCAGGGCCATGCGCTGCA...GACATCAACATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp CACCGCTGGCCTTTGGACCCTGCGGGGCGAGCGCTTTGGGATTGTAGCAATTCTGTGAGGGGGTGGGCATaGCGGAAAGACTGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: HRWPLDPAGRALWDCSNSVRGWA*RKDCLQ
Trigger: CTGCAAGCAGTCTTTCCGCCATGCCCACCCCCTCAC...AGAATTGCTACAATCCCAAAGCGCTCGCCCCGCAGGGTCCAAAGGCCAGCGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp AGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGATTTGCTTTAGGGTGGCCCGTGAGGGGGTaGGCATGGCGGAAAGACTGC +
Preference number: 4 (lower is better)
Translates to: STLHLQRQFPHGGRFALGWPVRG*AWRKDC
Trigger: GCAGTCTTTCCGCCATGCCCACCCCCTCACGGGCCA...CCCTAAAGCAAATCTGCCACCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp CTCTCCGTGTGGCTTTCCTGGTCGACGGTGTCAGAAATGTTTCCTGCAGCGGCATGGCCCGTGAGGGGGTaGGCATGGCGGAAAGACTGC +
Preference number: 4 (lower is better)
Translates to: LSVWLSWSTVSEMFPAAAWPVRG*AWRKDC
Trigger: GCAGTCTTTCCGCCATGCCCACCCCCTCACGGGCCA...TGCCGCTGCAGGAAACATTTCTGACACCGTCGACCAGGAAAGCCACACGGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp CACCGCTGGCCTTTGGACCCTGCGGGGCGAGCGCTTTGGGATTGTAGCAATTCTCTGCTCGGTGCTGTCTaGAATGACGGCCTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: HRWPLDPAGRALWDCSNSLLGAV*NDGLQG
Trigger: GCCCTGAAGGCCGTCATTCCAGACAGCACCGAGCAG...AGAATTGCTACAATCCCAAAGCGCTCGCCCCGCAGGGTCCAAAGGCCAGCGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp GCCTCTCCGTGTGGCTTTCCTGGTCGACGGTGTCAGAAATGTTTCCTGCAGCGGTCCCGAGTCACACCCTaGCTGGGCCTATGCGGCCAA +
Preference number: 4 (lower is better)
Translates to: ASPCGFPGRRCQKCFLQRSRVTP*LGLCGQ
Trigger: TTGGCCGCATAGGCCCAGCCAGGGTGTGACTCGGGA...CCGCTGCAGGAAACATTTCTGACACCGTCGACCAGGAAAGCCACACGGAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp CTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAATCCGTGTGGCTTTCCTaGTCGACGGTGTCAGAAATG +
Preference number: 4 (lower is better)
Translates to: LLLVGLVRPHSAIAAILESVWLS*STVSEM
Trigger: CATTTCTGACACCGTCGACCAGGAAAGCCACACGGA...TTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp CACCGCTGGCCTTTGGACCCTGCGGGGCGAGCGCTTTGGGATTGTAGCAATTCTGCGCTTCACCCACAGTaGCCTCTCCGTGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: HRWPLDPAGRALWDCSNSALHPQ*PLRVAF
Trigger: GAAAGCCACACGGAGAGGCCACTGTGGGTGAAGCGC...AGAATTGCTACAATCCCAAAGCGCTCGCCCCGCAGGGTCCAAAGGCCAGCGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp CGTGTGGCTTTCCTGGTCGACGGTGTCAGAAATGTTTCCTGCAGCGGCAGGCAGGGCTGGAGGTGCACTTaGAACCCGCTGCAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: RVAFLVDGVRNVSCSGRQGWRCT*NPLQEV
Trigger: CACCTCCTGCAGCGGGTTCCAAGTGCACCTCCAGCC...CTGCCTGCCGCTGCAGGAAACATTTCTGACACCGTCGACCAGGAAAGCCACACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp ACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCATCAGGCCCATCAGGCTaGAGGTGCACTTGGAACCCG +
Preference number: 4 (lower is better)
Translates to: TEDTPRRPAQTHQHLASPSGPSG*RCTWNP
Trigger: CGGGTTCCAAGTGCACCTCCAGCCTGATGGGCCTGA...TGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp TCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGATGAGCTGCTCACTCTCTaGGTACCTGGGTTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: SDPPAPCISSVSSPTVADELLTL*VPGLQP
Trigger: GGGCTGCAACCCAGGTACCCAGAGAGTGAGCAGCTC...ATCTGCCACCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397088.4
ENST00000397092.5
CDS-3UTR TCA 90 bp CGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGCCCCTACTGGCCATTTaGATTTTCACTCGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: RPAQTHQHLASPASVPPRPLLAI*IFTRRF
Trigger: GAAGCGGCGAGTGAAAATTCAAATGGCCAGTAGGGG...CCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297469.3
ENST00000397092.5
CDS-3UTR TCA 90 bp TTCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACCCAGCGGGTGGGACAGGTTaGGCTCGGGGGAGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: FVSHRCWSISLSWHPTNPAGGTG*ARGRWC
Trigger: ACACCACCTCCCCCGAGCTCAACCTGTCCCACCCGC...TGGGTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp GTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCTCTTCTCGCGGAAGCTaGTGTTCACCACCAGGATCA +
Preference number: 4 (lower is better)
Translates to: VRPHSAIAAILEDGGRSGSSRGS*CSPPGS
Trigger: TGATCCTGGTGGTGAACATCAGCTTCCGCGAGAAGA...GCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp CTAGCTAGCTCAGACCGTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCGAAGCTCATCCAGGTaGGGAAGAAGACGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LASSDRGHRGHTATSSSDRSSSR*GRRRCC
Trigger: ACAGCAGCGTCTTCTTCCTCACCTGGATGAGCTTCG...GTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCACGGTCTGAGCTAGCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp TCAGACCGTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCAGCCAGAAGCCACATCTaGCCGCAGTTTAGAGACATG +
Preference number: 4 (lower is better)
Translates to: SDRGHRGHTATSSSDPPAARSHI*PQFRDM
Trigger: CATGTCTCTAAACTGCGGTCAGATGTGGCTTCTGGC...TGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCACGGTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp AGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGGCCAGAAGCCACATCTaGCCGCAGTTTAGAGACATG +
Preference number: 4 (lower is better)
Translates to: RPHSAIAAILEDGGRSGVARSHI*PQFRDM
Trigger: CATGTCTCTAAACTGCGGTCAGATGTGGCTTCTGGC...CACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp GCTAGCTCAGACCGTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCAGCCAGAAGCCACATCTaGCCGCAGTTTAGAGACATG +
Preference number: 4 (lower is better)
Translates to: ASSDRGHRGHTATSSSDPARSHI*PQFRDM
Trigger: CATGTCTCTAAACTGCGGTCAGATGTGGCTTCTGGC...TGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCACGGTCTGAGCTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp TCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGATCAAGGTGACCAGTCGTaGGGTTTCCTAAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SDPPAPCISSVSSPTVADQGDQS*GFLSSP
Trigger: GGGGCTGCTTAGGAAACCTCACGACTGGTCACCTTG...ATCTGCCACCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GAACCACCCCGGAGCAGACGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCGGCAAATTTGTTTTCTaGTCAATGTACAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: EPPRSRRRALHRGAFLLLGKFVF*SMYSLS
Trigger: GCTGAGGCTGTACATTGAGCAGAAAACAAATTTGCC...GAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCGTCTGCTCCGGGGTGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp ACCCTGCGGGGCGAGCGCTTTGGGATTGTAGCAATTCTGTGTGAGGAGTGCAAGGTCCACCCAGGTGTGTaGAGCTCCCGAGTCACACCC +
Preference number: 4 (lower is better)
Translates to: TLRGERFGIVAILCEECKVHPGV*SSRVTP
Trigger: GGGTGTGACTCGGGAGCTGCACACACCTGGGTGGAC...CTTGCACTCCTCACACAGAATTGCTACAATCCCAAAGCGCTCGCCCCGCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp CGACTAACCCACACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCGACCCACCAGCACCTTaGATCTCCAGCGTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: RLTHTAARTVPVHMSAIADPPAP*ISSVSS
Trigger: GGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTC...GGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTGTGGGTTAGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CACCGCTGGCCTTTGGACCCTGCGGGGCGAGCGCTTTGGGATTGTAGCAATTCTGACCCACCAGCACCTTaGATCTCCAGCGTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: HRWPLDPAGRALWDCSNSDPPAP*ISSVSS
Trigger: GGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTC...AGAATTGCTACAATCCCAAAGCGCTCGCCCCGCAGGGTCCAAAGGCCAGCGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp CGACTAACCCACACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCCAGGAGGTGTACCTCTaGTGGACCTGCCGAATGCCT +
Preference number: 4 (lower is better)
Translates to: RLTHTAARTVPVHMSAIAQEVYL*WTCRMP
Trigger: AGGCATTCGGCAGGTCCAGCAGAGGTACACCTCCTG...GGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTGTGGGTTAGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp AGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGATTTGCTTTAGGGCCGTCCAGATGTTGGTaGCCTCTTCCCCACCAGGGC +
Preference number: 4 (lower is better)
Translates to: STLHLQRQFPHGGRFALGPSRCW*PLPHQG
Trigger: GCCCTGGTGGGGAAGAGGCCACCAACATCTGGACGG...CCCTAAAGCAAATCTGCCACCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297469.3
ENST00000397092.5
CDS-3UTR CCA 90 bp CTCTCCGTGTGGCTTTCCTGGTCGACGGTGTCAGAAATGTTTCCTGCAGCGGCAGTGCACAGTCCCGCGTaGAGCTGCTCACTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LSVWLSWSTVSEMFPAAAVHSPA*SCSLSG
Trigger: CCCAGAGAGTGAGCAGCTCCACGCGGGACTGTGCAC...TGCCGCTGCAGGAAACATTTCTGACACCGTCGACCAGGAAAGCCACACGGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp CCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCTGCCCACAAAGCCGATaGGGAAGAGGAAGATGGTGT +
Preference number: 4 (lower is better)
Translates to: PGEAAQRHCCHPGRWRTLCPQSR*GRGRWC
Trigger: ACACCATCTTCCTCTTCCCCATCGGCTTTGTGGGCA...GAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp CTAGCTAGCTCAGACCGTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACAGTACAGGTCGGGGATaGTCATCTTCTCGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: LASSDRGHRGHTATSSSDSTGRG*SSSRGS
Trigger: GCTTCCGCGAGAAGATGACCATCCCCGACCTGTACT...GTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCACGGTCTGAGCTAGCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp CATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAGCATGTGAGGGGGTGGGCATaGCGGAAAGACTGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: HCCHPGRWRTLRRAPEQHVRGWA*RKDCLQ
Trigger: CTGCAAGCAGTCTTTCCGCCATGCCCACCCCCTCAC...ATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp AACCCACACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGTTGCGAGGTTGACAATGTaGCCCGTGAGGGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: NPHGSSHGPSPHECNCHVARLTM*PVRGWA
Trigger: TGCCCACCCCCTCACGGGCCACATTGTCAACCTCGC...AACATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTGTGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp AGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGATTTGCTTTAGGGGCGAGGTTGACAATGTaGCCCGTGAGGGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: STLHLQRQFPHGGRFALGARLTM*PVRGWA
Trigger: TGCCCACCCCCTCACGGGCCACATTGTCAACCTCGC...CCCTAAAGCAAATCTGCCACCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp CGTGTGGCTTTCCTGGTCGACGGTGTCAGAAATGTTTCCTGCAGCGGCAGGCAGCTGCTCGGTGCTGTCTaGAATGACGGCCTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: RVAFLVDGVRNVSCSGRQLLGAV*NDGLQG
Trigger: GCCCTGAAGGCCGTCATTCCAGACAGCACCGAGCAG...CTGCCTGCCGCTGCAGGAAACATTTCTGACACCGTCGACCAGGAAAGCCACACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp TGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAGCATGTTTTCTCCCGAGTCACACCCTaGCTGGGCCTATGCGGCCAA +
Preference number: 4 (lower is better)
Translates to: CHPGRWRTLRRAPEQHVFSRVTP*LGLCGQ
Trigger: TTGGCCGCATAGGCCCAGCCAGGGTGTGACTCGGGA...GAAAACATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp GCTAGCTCAGACCGTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCATTTAGAGACATGACGTaGCCGTGCCTTGTGTCCACC +
Preference number: 4 (lower is better)
Translates to: ASSDRGHRGHTATSSSDPFRDMT*PCLVST
Trigger: GGTGGACACAAGGCACGGCCACGTCATGTCTCTAAA...TGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCACGGTCTGAGCTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp CTAGCTAGCTCAGACCGTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACGCGGGGCGAGCGCTTTaGGATTGTAGCAATTCTGTG +
Preference number: 4 (lower is better)
Translates to: LASSDRGHRGHTATSSSDAGRAL*DCSNSV
Trigger: CACAGAATTGCTACAATCCCAAAGCGCTCGCCCCGC...GTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCACGGTCTGAGCTAGCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp GCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGTTGATGTCAACAAGCCAGGCTGGTCACCGCTaGCCTTTGGACCCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: ARTVPVHMSAIAMLMSTSQAGHR*PLDPAG
Trigger: CCCCGCAGGGTCCAAAGGCCAGCGGTGACCAGCCTG...GCTTGTTGACATCAACATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp GTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCTCCGTGTGGCTTTCCTaGTCGACGGTGTCAGAAATG +
Preference number: 4 (lower is better)
Translates to: VRPHSAIAAILEDGGRSGSVWLS*STVSEM
Trigger: CATTTCTGACACCGTCGACCAGGAAAGCCACACGGA...GCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp CACCGCTGGCCTTTGGACCCTGCGGGGCGAGCGCTTTGGGATTGTAGCAATTCTGAGGTGTACCTCTGCTaGACCTGCCGAATGCCTGAG +
Preference number: 4 (lower is better)
Translates to: HRWPLDPAGRALWDCSNSEVYLC*TCRMPE
Trigger: CTCAGGCATTCGGCAGGTCCAGCAGAGGTACACCTC...AGAATTGCTACAATCCCAAAGCGCTCGCCCCGCAGGGTCCAAAGGCCAGCGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp CGTGTGGCTTTCCTGGTCGACGGTGTCAGAAATGTTTCCTGCAGCGGCAGGCAGGAGCTGCTCACTCTCTaGGTACCTGGGTTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: RVAFLVDGVRNVSCSGRQELLTL*VPGLQP
Trigger: GGGCTGCAACCCAGGTACCCAGAGAGTGAGCAGCTC...CTGCCTGCCGCTGCAGGAAACATTTCTGACACCGTCGACCAGGAAAGCCACACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397088.4
ENST00000397092.5
CDS-3UTR TCA 90 bp AACCCACACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGTTGCAGGAAGAGCGACATaGAGGTGCACAGGACGGCGA +
Preference number: 4 (lower is better)
Translates to: NPHGSSHGPSPHECNCHVAGRAT*RCTGRR
Trigger: TCGCCGTCCTGTGCACCTTCATGTCGCTCTTCCTGC...AACATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTGTGGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp CCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGATTTGCTCGCTGCTGTACATGTTaGCCTGCAGGAAGAGCGACA +
Preference number: 4 (lower is better)
Translates to: PTSTLHLQRQFPHGGRFARCCTC*PAGRAT
Trigger: TGTCGCTCTTCCTGCAGGTCAACATGTACAGCAGCG...AGCAAATCTGCCACCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp TCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGATTCTACACGGCACTGCTaGACCTCACATCCGACTGCT +
Preference number: 4 (lower is better)
Translates to: SDPPAPCISSVSSPTVADSTRHC*TSHPTA
Trigger: AGCAGTCGGATGTGAGGTTCAGCAGTGCCGTGTAGA...ATCTGCCACCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR TCA 90 bp AGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTGCCAGAAGCCACATCTaGCCGCAGTTTAGAGACATG +
Preference number: 4 (lower is better)
Translates to: RTHRDVQLRPTSTLHLQRARSHI*PQFRDM
Trigger: CATGTCTCTAAACTGCGGTCAGATGTGGCTTCTGGC...ACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCTCTCCTGCTCATGGTTaGGGATTTCACAGTCTCGTG +
Preference number: 4 (lower is better)
Translates to: PGEAAQRHCCHPGRWRTLSPAHG*GFHSLV
Trigger: CACGAGACTGTGAAATCCGCAACCATGAGCAGGAGA...GAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297469.3
ENST00000397092.5
CDS-3UTR GCA 90 bp GCCTCTCCGTGTGGCTTTCCTGGTCGACGGTGTCAGAAATGTTTCCTGCAGCGGCACTCTCTGGGTACCTaGCGTCCAGATGTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: ASPCGFPGRRCQKCFLQRHSLGT*RPDVGG
Trigger: GCCACCAACATCTGGACGGCAGGTACCCAGAGAGTG...CCGCTGCAGGAAACATTTCTGACACCGTCGACCAGGAAAGCCACACGGAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297469.3
CDS-3UTR GCA 90 bp CTCTCCGTGTGGCTTTCCTGGTCGACGGTGTCAGAAATGTTTCCTGCAGCGGCAAGTCCCGCGTGGAGCTaGTCACTCTCTGGGTACCTG +
Preference number: 4 (lower is better)
Translates to: LSVWLSWSTVSEMFPAAASPAWS*SLSGYL
Trigger: CAGGTACCCAGAGAGTGAGCAGCTCCACGCGGGACT...TGCCGCTGCAGGAAACATTTCTGACACCGTCGACCAGGAAAGCCACACGGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp TTCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACCCACTCACACCGGCATGGTaGATCCGTGGAGGCGAGGGC +
Preference number: 4 (lower is better)
Translates to: FVSHRCWSISLSWHPTNPLTPAW*IRGGEG
Trigger: GCCCTCGCCTCCACGGATGCACCATGCCGGTGTGAG...TGGGTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp GACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCAAGTGGGAAGAACAGATaGTCCTCACACCGGCATGGT +
Preference number: 4 (lower is better)
Translates to: DTPRRPAQTHQHLASPASSGKNR*SSHRHG
Trigger: ACCATGCCGGTGTGAGGAGCATCTGTTCTTCCCACT...TGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp GTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGCAGCTTTCAAGATTTaGCGAAAGGCTCCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: VRPHSAIAAILEDGGRSGAAFKI*RKAPRA
Trigger: AGCTCTGGGAGCCTTTCGGCAAATCTTGAAAGCTGC...GCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCTCACATCCATGTCTCTaGACCGTGCAGCTTTCAAGA +
Preference number: 4 (lower is better)
Translates to: GRTAPLLPSWKMEDAQACSHPCL*TVQLSR
Trigger: TCTTGAAAGCTGCACGGTGCAGAGACATGGATGTGA...GCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GCCTCTCCGTGTGGCTTTCCTGGTCGACGGTGTCAGAAATGTTTCCTGCAGCGGAGGCCGATCACGTACTaGTGGTGCTCCGAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: ASPCGFPGRRCQKCFLQRRPITY*WCSESS
Trigger: TGAGCTCTCGGAGCACCAGCAGTACGTGATCGGCCT...CCGCTGCAGGAAACATTTCTGACACCGTCGACCAGGAAAGCCACACGGAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp CAGGCTGGTCACCGCTGGCCTTTGGACCCTGCGGGGCGAGCGCTTTGGGATTGTCTGTACATGTTGACCTaGAGGAAGAGCGACATGAAG +
Preference number: 4 (lower is better)
Translates to: QAGHRWPLDPAGRALWDCLYMLT*RKSDMK
Trigger: CTTCATGTCGCTCTTCCTGCAGGTCAACATGTACAG...ACAATCCCAAAGCGCTCGCCCCGCAGGGTCCAAAGGCCAGCGGTGACCAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp CATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAGCATGACCCACCAGCACCTTaGATCTCCAGCGTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: HCCHPGRWRTLRRAPEQHDPPAP*ISSVSS
Trigger: GGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTC...ATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp TGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAGCATGTTTTCCCATCAGGCTGGAGGTaGACTTGGAACCCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: CHPGRWRTLRRAPEQHVFPSGWR*TWNPLQ
Trigger: CTGCAGCGGGTTCCAAGTGCACCTCCAGCCTGATGG...GAAAACATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp GGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCGCACCTGTGGTGGTTTaGGTTGGGTTTGTTAACTGC +
Preference number: 4 (lower is better)
Translates to: GHRGHTATSSSDPPAPCIAPVVV*VGFVNC
Trigger: GCAGTTAACAAACCCAACCCAAACCACCACAGGTGC...GATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp CGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGGAGGAGCACCTGTGGTaGTTTGGGTTGGGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: RPAQTHQHLASPASVPPREEHLW*FGLGLL
Trigger: TAACAAACCCAACCCAAACCACCACAGGTGCTCCTC...CCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp TGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAGCATGTTTTCCCCACGCCCCGGGCTTaGGAAGTCACATCCATGTCT +
Preference number: 4 (lower is better)
Translates to: CHPGRWRTLRRAPEQHVFPTPRA*EVTSMS
Trigger: AGACATGGATGTGACTTCCCAAGCCCGGGGCGTGGG...GAAAACATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp CTAACCCACACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGCCGATCACGTACTGCTaGTGCTCCGAGAGCTCACCT +
Preference number: 4 (lower is better)
Translates to: LTHTAARTVPVHMSAIAMPITYC*CSESSP
Trigger: AGGTGAGCTCTCGGAGCACCAGCAGTACGTGATCGG...CATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTGTGGGTTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp TTCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACCCAACAGGCTGCAGCGCATaGCCCTGGCCAGGGCGATGT +
Preference number: 4 (lower is better)
Translates to: FVSHRCWSISLSWHPTNPTGCSA*PWPGRC
Trigger: ACATCGCCCTGGCCAGGGCCATGCGCTGCAGCCTGT...TGGGTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp CACACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGTTGATGGTGAGGGGGTGGGCATaGCGGAAAGACTGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: HTAARTVPVHMSAIAMLMVRGWA*RKDCLQ
Trigger: CTGCAAGCAGTCTTTCCGCCATGCCCACCCCCTCAC...CATCAACATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp TCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACCCACGAGTCACACCCTGGCTaGGCCTATGCGGCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: SSATGAGVFHCPGTRLTHESHPG*AYAAKA
Trigger: AGCCTTGGCCGCATAGGCCCAGCCAGGGTGTGACTC...GTGGGTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp TCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACCCACTCCCGAGTCACACCCTaGCTGGGCCTATGCGGCCAA +
Preference number: 4 (lower is better)
Translates to: SSATGAGVFHCPGTRLTHSRVTP*LGLCGQ
Trigger: TTGGCCGCATAGGCCCAGCCAGGGTGTGACTCGGGA...GTGGGTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp AGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTTTTAGAGACATGACGTaGCCGTGCCTTGTGTCCACC +
Preference number: 4 (lower is better)
Translates to: RTHRDVQLRPTSTLHLQRFRDMT*PCLVST
Trigger: GGTGGACACAAGGCACGGCCACGTCATGTCTCTAAA...ACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp GCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGATTTGCTTTAGGGTTCCTGTGAGCTGGGTGACAGGCTaGTCACCGCTGGCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: ASPASVPPRWQICFRVPVSWVTG*SPLAFG
Trigger: TCCAAAGGCCAGCGGTGACCAGCCTGTCACCCAGCT...CACAGGAACCCTAAAGCAAATCTGCCACCGTGGGGGAACTGACGCTGGAGATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp ACCCTGCGGGGCGAGCGCTTTGGGATTGTAGCAATTCTGTGTGAGGAGTGCAAGAGTGGCCTCTCCGTGTaGCTTTCCTGGTCGACGGTG +
Preference number: 4 (lower is better)
Translates to: TLRGERFGIVAILCEECKSGLSV*LSWSTV
Trigger: CACCGTCGACCAGGAAAGCCACACGGAGAGGCCACT...CTTGCACTCCTCACACAGAATTGCTACAATCCCAAAGCGCTCGCCCCGCAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp TGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAGCATGTTTTCAGTGGCCTCTCCGTGTaGCTTTCCTGGTCGACGGTG +
Preference number: 4 (lower is better)
Translates to: CHPGRWRTLRRAPEQHVFSGLSV*LSWSTV
Trigger: CACCGTCGACCAGGAAAGCCACACGGAGAGGCCACT...GAAAACATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp AACCCACACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGTTGCGCTTCACCCACAGTaGCCTCTCCGTGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: NPHGSSHGPSPHECNCHVALHPQ*PLRVAF
Trigger: GAAAGCCACACGGAGAGGCCACTGTGGGTGAAGCGC...AACATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTGTGGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp TGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAGCATGTTTTCTCCTGGAAGCCTCCTTaGTCAGGCCCATCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: CHPGRWRTLRRAPEQHVFSWKPP*SGPSGW
Trigger: CCAGCCTGATGGGCCTGACCAAGGAGGCTTCCAGGA...GAAAACATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397088.4
ENST00000397092.5
CDS-3UTR TCA 90 bp CCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCAAGCGTGATTCTCCTTaGAGTGAGCCTGGCATTTGT +
Preference number: 4 (lower is better)
Translates to: PRRPAQTHQHLASPASVPKRDSP*SEPGIC
Trigger: ACAAATGCCAGGCTCACTTCAAGGAGAATCACGCTT...GGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR TCA 90 bp CGTGTGGCTTTCCTGGTCGACGGTGTCAGAAATGTTTCCTGCAGCGGCAGGCAGCGCTGCTGTACATGTTaGCCTGCAGGAAGAGCGACA +
Preference number: 4 (lower is better)
Translates to: RVAFLVDGVRNVSCSGRQRCCTC*PAGRAT
Trigger: TGTCGCTCTTCCTGCAGGTCAACATGTACAGCAGCG...CTGCCTGCCGCTGCAGGAAACATTTCTGACACCGTCGACCAGGAAAGCCACACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR TCA 90 bp AGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTTGTAGCAATTCTGTGTaGGGAGTGCAAGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: RTHRDVQLRPTSTLHLQRCSNSV*GVQGDQ
Trigger: CTGGTCACCTTGCACTCCTCACACAGAATTGCTACA...ACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp ACCCTGCGGGGCGAGCGCTTTGGGATTGTAGCAATTCTGTGTGAGGAGTGCAAGGGGTTCCTGTGTAACTaGGGCGCTTCACCCACAGTG +
Preference number: 4 (lower is better)
Translates to: TLRGERFGIVAILCEECKGFLCN*GASPTV
Trigger: CACTGTGGGTGAAGCGCCTCAGTTACACAGGAACCC...CTTGCACTCCTCACACAGAATTGCTACAATCCCAAAGCGCTCGCCCCGCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR TCA 90 bp GCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGATTTGCTTTAGGGTTCCTGTGTCAACAAGCAGTGACTaGACCACCCCGGAGCAGACG +
Preference number: 4 (lower is better)
Translates to: ASPASVPPRWQICFRVPVSTSSD*TTPEQT
Trigger: CGTCTGCTCCGGGGTGGTTCAGTCACTGCTTGTTGA...CACAGGAACCCTAAAGCAAATCTGCCACCGTGGGGGAACTGACGCTGGAGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp CTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAGCATGTTTTTCAACAAGCAGTGACTaGACCACCCCGGAGCAGACG +
Preference number: 4 (lower is better)
Translates to: LPSWKMEDAQACTRAACFSTSSD*TTPEQT
Trigger: CGTCTGCTCCGGGGTGGTTCAGTCACTGCTTGTTGA...AAAACATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp ACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAAGTGGGAAGAACAGATaGTCCTCACACCGGCATGGT +
Preference number: 4 (lower is better)
Translates to: TEDTPRRPAQTHQHLASPSGKNR*SSHRHG
Trigger: ACCATGCCGGTGTGAGGAGCATCTGTTCTTCCCACT...TGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp CACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGGCAGCTTTCAAGATTTaGCGAAAGGCTCCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: HSAIAAILEDGGRSGVHQAAFKI*RKAPRA
Trigger: AGCTCTGGGAGCCTTTCGGCAAATCTTGAAAGCTGC...CTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCACATGTCTCTGCACCGTaGAGCTTTCAAGATTTGCCG +
Preference number: 4 (lower is better)
Translates to: DTPRRPAQTHQHLASPASHVSAP*SFQDLP
Trigger: CGGCAAATCTTGAAAGCTGCACGGTGCAGAGACATG...TGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAGCATGTTTTGTCCGCTGCAGGAGGTaGACGCTGATGAAGACGTTC +
Preference number: 4 (lower is better)
Translates to: LPSWKMEDAQACTRAACFVRCRR*TLMKTF
Trigger: GAACGTCTTCATCAGCGTGCACCTCCTGCAGCGGAC...AAAACATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGATTTGCTTTAGGGTTCCTGTGGTCCGCTGCAGGAGGTaGACGCTGATGAAGACGTTC +
Preference number: 4 (lower is better)
Translates to: ASPASVPPRWQICFRVPVVRCRR*TLMKTF
Trigger: GAACGTCTTCATCAGCGTGCACCTCCTGCAGCGGAC...CACAGGAACCCTAAAGCAAATCTGCCACCGTGGGGGAACTGACGCTGGAGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGCAAATTTGTTTTCTaGTCAATGTACAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: AAAPRGPGEAAQRHCCHPGKFVF*SMYSLS
Trigger: GCTGAGGCTGTACATTGAGCAGAAAACAAATTTGCC...AGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp CGACTAACCCACACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCAACCTCACATCCGACTaGTCGGTGCTGTCTGGAATG +
Preference number: 4 (lower is better)
Translates to: RLTHTAARTVPVHMSAIANLTSD*SVLSGM
Trigger: CATTCCAGACAGCACCGAGCAGTCGGATGTGAGGTT...GGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTGTGGGTTAGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp GCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGCCCAGTCCACATGAGTaGAATTGCCATGTTGATGTC +
Preference number: 4 (lower is better)
Translates to: AQTHQHLASPASVPPRWQPSPHE*NCHVDV
Trigger: GACATCAACATGGCAATTGCACTCATGTGGACTGGG...CTGCCACCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCTTCGTCAGCCACAGGTaGTGGAGTATTTCATTGTCC +
Preference number: 4 (lower is better)
Translates to: PRRPAQTHQHLASPASVPFVSHR*WSISLS
Trigger: GGACAATGAAATACTCCAGCACCTGTGGCTGACGAA...GGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGTTCGTCAGCCACAGGTaGTGGAGTATTTCATTGTCC +
Preference number: 4 (lower is better)
Translates to: GEAAQRHCCHPGRWRTLRFVSHR*WSISLS
Trigger: GGACAATGAAATACTCCAGCACCTGTGGCTGACGAA...CCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp CGTGTGGCTTTCCTGGTCGACGGTGTCAGAAATGTTTCCTGCAGCGGCAGGCAGAGTACAGGTCGGGGATaGTCATCTTCTCGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: RVAFLVDGVRNVSCSGRQSTGRG*SSSRGS
Trigger: GCTTCCGCGAGAAGATGACCATCCCCGACCTGTACT...CTGCCTGCCGCTGCAGGAAACATTTCTGACACCGTCGACCAGGAAAGCCACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp AGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTTCAGTTCCCCCACGGTaGCAGATTTGCTTTAGGGTT +
Preference number: 4 (lower is better)
Translates to: RTHRDVQLRPTSTLHLQRSVPPR*QICFRV
Trigger: AACCCTAAAGCAAATCTGCCACCGTGGGGGAACTGA...ACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp GAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTAGTATTTCATTGTCCTaGCACCCGACTAACCCACAC +
Preference number: 4 (lower is better)
Translates to: EAAQRHCCHPGRWRTLRRSISLS*HPTNPH
Trigger: GTGTGGGTTAGTCGGGTGCCAGGACAATGAAATACT...ACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp CGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGAGTATTTCATTGTCCTaGCACCCGACTAACCCACAC +
Preference number: 4 (lower is better)
Translates to: RPAQTHQHLASPASVPPRSISLS*HPTNPH
Trigger: GTGTGGGTTAGTCGGGTGCCAGGACAATGAAATACT...CCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp GACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTCAGCCACAGGTGCTaGAGTATTTCATTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: DTPRRPAQTHQHLASPASVSHRC*SISLSW
Trigger: CCAGGACAATGAAATACTCCAGCACCTGTGGCTGAC...TGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp TCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACCCACTCCTGGAAGCCTCCTTaGTCAGGCCCATCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SSATGAGVFHCPGTRLTHSWKPP*SGPSGW
Trigger: CCAGCCTGATGGGCCTGACCAAGGAGGCTTCCAGGA...GTGGGTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397088.4
ENST00000397092.5
CDS-3UTR TCA 90 bp GCAGTTGTCCCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTGCGCGGGTGGGACAGGTTaGGCTCGGGGGAGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: AVVPSCYFCRNKFVSHRCAGGTG*ARGRWC
Trigger: ACACCACCTCCCCCGAGCTCAACCTGTCCCACCCGC...GCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGGGACAACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp AACCCACACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGTTCGAAGCTCATCCAGGTaGGGAAGAAGACGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: NPHGSSHGPSPHECNCHVRSSSR*GRRRCC
Trigger: ACAGCAGCGTCTTCTTCCTCACCTGGATGAGCTTCG...AACATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTGTGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp TCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACCCACGGGTTCCTGTGTAACTaGGGCGCTTCACCCACAGTG +
Preference number: 4 (lower is better)
Translates to: SSATGAGVFHCPGTRLTHGFLCN*GASPTV
Trigger: CACTGTGGGTGAAGCGCCTCAGTTACACAGGAACCC...GTGGGTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp GTTGTCCCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTGCTGGTCCTCGTGGGCCTGGTaGGGCCGCACAGCGCCATTG +
Preference number: 4 (lower is better)
Translates to: VVPSCYFCRNKFVSHRCWSSWAW*GRTAPL
Trigger: CAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGA...CCAGCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGGGACAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp ACCCTGCGGGGCGAGCGCTTTGGGATTGTAGCAATTCTGTGTGAGGAGTGCAAGGATGTCAACAAGCAGTaGCTGAACCACCCCGGAGCA +
Preference number: 4 (lower is better)
Translates to: TLRGERFGIVAILCEECKDVNKQ*LNHPGA
Trigger: TGCTCCGGGGTGGTTCAGTCACTGCTTGTTGACATC...CTTGCACTCCTCACACAGAATTGCTACAATCCCAAAGCGCTCGCCCCGCAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR TCA 90 bp CGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGGTGCAATTGCCATGTTaGTGTCAACAAGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: RPAQTHQHLASPASVPPRVQLPC*CQQAVT
Trigger: AGTCACTGCTTGTTGACATCAACATGGCAATTGCAC...CCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp GTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCTTTATTGACAAAGGCTaGACGTCACCAGCCTCATCA +
Preference number: 4 (lower is better)
Translates to: VRPHSAIAAILEDGGRSGFIDKG*TSPASS
Trigger: TGATGAGGCTGGTGACGTTCAGCCTTTGTCAATAAA...GCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CGACTAACCCACACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCGCAGCTTTCAAGATTTaGCGAAAGGCTCCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: RLTHTAARTVPVHMSAIAAAFKI*RKAPRA
Trigger: AGCTCTGGGAGCCTTTCGGCAAATCTTGAAAGCTGC...GGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTGTGGGTTAGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp TGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAGCATGTTTTCCCAGGATCAGGATGTTaGCCACAAAGCCGATGGGGA +
Preference number: 4 (lower is better)
Translates to: CHPGRWRTLRRAPEQHVFPGSGC*PQSRWG
Trigger: TCCCCATCGGCTTTGTGGGCAACATCCTGATCCTGG...GAAAACATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GGGAAGGTTTTTACATCATCACCGCAGTTGTCCCCAGCTGTTATTTCTGTAGAAAGCCCACGGTGCCGGTaGGCCCTGACCAGCACCCGG +
Preference number: 4 (lower is better)
Translates to: GKVFTSSPQLSPAVISVESPRCR*ALTSTR
Trigger: CCGGGTGCTGGTCAGGGCGCACCGGCACCGTGGGCT...TTCTACAGAAATAACAGCTGGGGACAACTGCGGTGATGATGTAAAAACCTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTGCTGGAGTATTATGCGGAGCGCCTTCTaGCGCCGGGGCCGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: PSCYFCRNKFVSHRCWSIMRSAF*RRGRSP
Trigger: TGGGCTGCGGCCCCGGCGGCAGAAGGCGCTCCGCAT...AATACTCCAGCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp AACCCACACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGTTGAGGACGCTCAGGCGTaGACCAGAGCAGCATGTTTT +
Preference number: 4 (lower is better)
Translates to: NPHGSSHGPSPHECNCHVEDAQA*TRAACF
Trigger: AAAACATGCTGCTCTGGTGCACGCCTGAGCGTCCTC...AACATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTGTGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GGCCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCCCACATGAGTGCAATTaGCATGTTGATGTCAACAAG +
Preference number: 4 (lower is better)
Translates to: GLVRPHSAIAAILEDGGRPHECN*HVDVNK
Trigger: CTTGTTGACATCAACATGGCAATTGCACTCATGTGG...GCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCACCCAGTCCACATGAGTaGAATTGCCATGTTGATGTC +
Preference number: 4 (lower is better)
Translates to: DTPRRPAQTHQHLASPASPSPHE*NCHVDV
Trigger: GACATCAACATGGCAATTGCACTCATGTGGACTGGG...TGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GTGCACCAGAGCAGCATGTTTTCCTTCTCCTCTTTAACTCGGCGGTGCGCTAGCGCACTTGGAACCCGCTaGAGGAGGTGTACCTCTGCT +
Preference number: 4 (lower is better)
Translates to: VHQSSMFSFSSLTRRCASALGTR*RRCTSA
Trigger: AGCAGAGGTACACCTCCTGCAGCGGGTTCCAAGTGC...GCTAGCGCACCGCCGAGTTAAAGAGGAGAAGGAAAACATGCTGCTCTGGTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp TCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGATGAGGAGCACCTGTGGTaGTTTGGGTTGGGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: SDPPAPCISSVSSPTVADEEHLW*FGLGLL
Trigger: TAACAAACCCAACCCAAACCACCACAGGTGCTCCTC...ATCTGCCACCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp CTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAGCATGTTTTCAGGAGGAGCACCTGTaGTGGTTTGGGTTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: LPSWKMEDAQACTRAACFQEEHL*WFGLGL
Trigger: CAAACCCAACCCAAACCACCACAGGTGCTCCTCCTG...AAAACATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp CTCTCCGTGTGGCTTTCCTGGTCGACGGTGTCAGAAATGTTTCCTGCAGCGGCAGCGGGGCGAGCGCTTTaGGATTGTAGCAATTCTGTG +
Preference number: 4 (lower is better)
Translates to: LSVWLSWSTVSEMFPAAAAGRAL*DCSNSV
Trigger: CACAGAATTGCTACAATCCCAAAGCGCTCGCCCCGC...TGCCGCTGCAGGAAACATTTCTGACACCGTCGACCAGGAAAGCCACACGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp GCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGTTGATGTCAACAAGCGCGCTTCACCCACAGTaGCCTCTCCGTGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: ARTVPVHMSAIAMLMSTSALHPQ*PLRVAF
Trigger: GAAAGCCACACGGAGAGGCCACTGTGGGTGAAGCGC...GCTTGTTGACATCAACATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp CGACTAACCCACACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCTCAGTTCCCCCACGGTaGCAGATTTGCTTTAGGGTT +
Preference number: 4 (lower is better)
Translates to: RLTHTAARTVPVHMSAIASVPPR*QICFRV
Trigger: AACCCTAAAGCAAATCTGCCACCGTGGGGGAACTGA...GGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTGTGGGTTAGTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp CCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGATTTGCTTCAGTTCCCCCACGGTaGCAGATTTGCTTTAGGGTT +
Preference number: 4 (lower is better)
Translates to: PTSTLHLQRQFPHGGRFASVPPR*QICFRV
Trigger: AACCCTAAAGCAAATCTGCCACCGTGGGGGAACTGA...AGCAAATCTGCCACCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp TCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACCCACTGCCATCCTGGAAGATaGAGGACGCTCAGGCGTGCA +
Preference number: 4 (lower is better)
Translates to: SSATGAGVFHCPGTRLTHCHPGR*RTLRRA
Trigger: TGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCA...GTGGGTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp AACCCACACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGTTCCATTGCTGCCATCCTaGAAGATGGAGGACGCTCAG +
Preference number: 4 (lower is better)
Translates to: NPHGSSHGPSPHECNCHVPLLPS*KMEDAQ
Trigger: CTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGG...AACATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTGTGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp TGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAGCATGTTTTCCCATTGCTGCCATCCTaGAAGATGGAGGACGCTCAG +
Preference number: 4 (lower is better)
Translates to: CHPGRWRTLRRAPEQHVFPLLPS*KMEDAQ
Trigger: CTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGG...GAAAACATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp AACCCACACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGTTCCCCTACTGGCCATTTaGATTTTCACTCGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: NPHGSSHGPSPHECNCHVPLLAI*IFTRRF
Trigger: GAAGCGGCGAGTGAAAATTCAAATGGCCAGTAGGGG...AACATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTGTGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297469.3
ENST00000397092.5
CDS-3UTR TCA 90 bp TCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACCCACCGAAGCTCATCCAGGTaGGGAAGAAGACGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SSATGAGVFHCPGTRLTHRSSSR*GRRRCC
Trigger: ACAGCAGCGTCTTCTTCCTCACCTGGATGAGCTTCG...GTGGGTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp GCAGTTGTCCCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTGCCGGATGCCATCCAGATaGGGCCACAGCTCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: AVVPSCYFCRNKFVSHRCRMPSR*GHSSAG
Trigger: CCCGGCTGAGCTGTGGCCTCATCTGGATGGCATCCG...GCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGGGACAACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp AAATTCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACGGGCACCAGCGTGGCTaGCACGGATGCCATCCAGAT +
Preference number: 4 (lower is better)
Translates to: KFVSHRCWSISLSWHPTNGHQRG*HGCHPD
Trigger: ATCTGGATGGCATCCGTGTCAGCCACGCTGGTGCCC...GTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGAATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp GGGAAGGTTTTTACATCATCACCGCAGTTGTCCCCAGCTGTTATTTCTGTAGAAGCAGGTGCACGGCGGTaGAGGGCACCAGCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GKVFTSSPQLSPAVISVEAGARR*RAPAWL
Trigger: CAGCCACGCTGGTGCCCTTCACCGCCGTGCACCTGC...TTCTACAGAAATAACAGCTGGGGACAACTGCGGTGATGATGTAAAAACCTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp GCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGTTGATGTCAACAAGCGGGTTCCTGTGTAACTaGGGCGCTTCACCCACAGTG +
Preference number: 4 (lower is better)
Translates to: ARTVPVHMSAIAMLMSTSGFLCN*GASPTV
Trigger: CACTGTGGGTGAAGCGCCTCAGTTACACAGGAACCC...GCTTGTTGACATCAACATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp CACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGTTTATTGACAAAGGCTaGACGTCACCAGCCTCATCA +
Preference number: 4 (lower is better)
Translates to: HSAIAAILEDGGRSGVHQFIDKG*TSPASS
Trigger: TGATGAGGCTGGTGACGTTCAGCCTTTGTCAATAAA...CTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp TCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACCCACATCACGTACTGCTGGTaGTCCGAGAGCTCACCTGTC +
Preference number: 4 (lower is better)
Translates to: SSATGAGVFHCPGTRLTHITYCW*SESSPV
Trigger: GACAGGTGAGCTCTCGGAGCACCAGCAGTACGTGAT...GTGGGTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGTTGATGTCAACAAGCAGGCCGATCACGTACTaGTGGTGCTCCGAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: ARTVPVHMSAIAMLMSTSRPITY*WCSESS
Trigger: TGAGCTCTCGGAGCACCAGCAGTACGTGATCGGCCT...GCTTGTTGACATCAACATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CGACTAACCCACACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCCTGTACATGTTGACCTaGAGGAAGAGCGACATGAAG +
Preference number: 4 (lower is better)
Translates to: RLTHTAARTVPVHMSAIALYMLT*RKSDMK
Trigger: CTTCATGTCGCTCTTCCTGCAGGTCAACATGTACAG...GGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTGTGGGTTAGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GTTGTCCCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTGCTGGTCGGTGTGCTGCAGGTaGACGGCGGTGAAGGGCACC +
Preference number: 4 (lower is better)
Translates to: VVPSCYFCRNKFVSHRCWSVCCR*TAVKGT
Trigger: GGTGCCCTTCACCGCCGTGCACCTGCAGCACACCGA...CCAGCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGGGACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GTTGTCCCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTGCTGGCCAGGCTGCGTCCGCTaGAGGAGGTGCACGCTGATG +
Preference number: 4 (lower is better)
Translates to: VVPSCYFCRNKFVSHRCWPGCVR*RRCTLM
Trigger: CATCAGCGTGCACCTCCTGCAGCGGACGCAGCCTGG...CCAGCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGGGACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCACCACATGAGTGCAATTaGCATGTTGATGTCAACAAG +
Preference number: 4 (lower is better)
Translates to: VGTEDTPRRPAQTHQHLAPHECN*HVDVNK
Trigger: CTTGTTGACATCAACATGGCAATTGCACTCATGTGG...TGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGCCACATGAGTGCAATTaGCATGTTGATGTCAACAAG +
Preference number: 4 (lower is better)
Translates to: AQTHQHLASPASVPPRWQPHECN*HVDVNK
Trigger: CTTGTTGACATCAACATGGCAATTGCACTCATGTGG...CTGCCACCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GCTAGCTCAGACCGTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCACATGAGTGCAATTaGCATGTTGATGTCAACAAG +
Preference number: 4 (lower is better)
Translates to: ASSDRGHRGHTATSSSDPPHECN*HVDVNK
Trigger: CTTGTTGACATCAACATGGCAATTGCACTCATGTGG...TGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCACGGTCTGAGCTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp GCTTCACCCACAGTGGCCTCTCCGTGTGGCTTTCCTGGTCGACGGTGTCAGAAAGAGTGCGCCCCCTACTaGCCATTTGAATTTTCACTC +
Preference number: 4 (lower is better)
Translates to: ASPTVASPCGFPGRRCQKECAPY*PFEFSL
Trigger: GAGTGAAAATTCAAATGGCCAGTAGGGGGCGCACTC...TTTCTGACACCGTCGACCAGGAAAGCCACACGGAGAGGCCACTGTGGGTGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297469.3
ENST00000397092.5
CDS-3UTR CCA 90 bp GCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGATTTGCTTTAGGGTTCCTGTGCGCCTCTCCTGCTCATaGTTGCGGATTTCACAGTCT +
Preference number: 4 (lower is better)
Translates to: ASPASVPPRWQICFRVPVRLSCS*LRISQS
Trigger: AGACTGTGAAATCCGCAACCATGAGCAGGAGAGGCG...CACAGGAACCCTAAAGCAAATCTGCCACCGTGGGGGAACTGACGCTGGAGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297469.3
ENST00000397092.5
CDS-3UTR CCA 90 bp CACACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGTTGATGCGCCTCTCCTGCTCATaGTTGCGGATTTCACAGTCT +
Preference number: 4 (lower is better)
Translates to: HTAARTVPVHMSAIAMLMRLSCS*LRISQS
Trigger: AGACTGTGAAATCCGCAACCATGAGCAGGAGAGGCG...CATCAACATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297469.3
ENST00000397092.5
CDS-3UTR CCA 90 bp GCTGGCCTTTGGACCCTGCGGGGCGAGCGCTTTGGGATTGTAGCAATTCTGTGTGCACCTGTGGTGGTTTaGGTTGGGTTTGTTAACTGC +
Preference number: 4 (lower is better)
Translates to: AGLWTLRGERFGIVAILCAPVVV*VGFVNC
Trigger: GCAGTTAACAAACCCAACCCAAACCACCACAGGTGC...ACACAGAATTGCTACAATCCCAAAGCGCTCGCCCCGCAGGGTCCAAAGGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp CACACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGTTGATGTGCCCACAAAGCCGATaGGGAAGAGGAAGATGGTGT +
Preference number: 4 (lower is better)
Translates to: HTAARTVPVHMSAIAMLMCPQSR*GRGRWC
Trigger: ACACCATCTTCCTCTTCCCCATCGGCTTTGTGGGCA...CATCAACATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp ACCCTGCGGGGCGAGCGCTTTGGGATTGTAGCAATTCTGTGTGAGGAGTGCAAGTTTAGAGACATGACGTaGCCGTGCCTTGTGTCCACC +
Preference number: 4 (lower is better)
Translates to: TLRGERFGIVAILCEECKFRDMT*PCLVST
Trigger: GGTGGACACAAGGCACGGCCACGTCATGTCTCTAAA...CTTGCACTCCTCACACAGAATTGCTACAATCCCAAAGCGCTCGCCCCGCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp GCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGTTGATGTCAACAAGCTGCCATCCTGGAAGATaGAGGACGCTCAGGCGTGCA +
Preference number: 4 (lower is better)
Translates to: ARTVPVHMSAIAMLMSTSCHPGR*RTLRRA
Trigger: TGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCA...GCTTGTTGACATCAACATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp TTCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACCCATGCCATCCTGGAAGATaGAGGACGCTCAGGCGTGCA +
Preference number: 4 (lower is better)
Translates to: FVSHRCWSISLSWHPTNPCHPGR*RTLRRA
Trigger: TGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCA...TGGGTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp TCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACCCACTCTTCTCGCGGAAGCTaGTGTTCACCACCAGGATCA +
Preference number: 4 (lower is better)
Translates to: SSATGAGVFHCPGTRLTHSSRGS*CSPPGS
Trigger: TGATCCTGGTGGTGAACATCAGCTTCCGCGAGAAGA...GTGGGTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp TCATCACCGCAGTTGTCCCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCCGGATGCCATCCAGATaGGGCCACAGCTCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: SSPQLSPAVISVETNSSARMPSR*GHSSAG
Trigger: CCCGGCTGAGCTGTGGCCTCATCTGGATGGCATCCG...GGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGGGACAACTGCGGTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp AAATTCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACGCCTCAGCTTGTCCCTaGAGGTCTCCCCGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: KFVSHRCWSISLSWHPTNASACP*RSPRES
Trigger: GCTTTCTCGGGGAGACCTTCAGGGACAAGCTGAGGC...GTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR TCA 90 bp GTTGTCCCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTGCTGGCGGTGCTGTCTGGAATaGCGGCCTTCAGGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: VVPSCYFCRNKFVSHRCWRCCLE*RPSGQR
Trigger: ACGCTGCCCTGAAGGCCGTCATTCCAGACAGCACCG...CCAGCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGGGACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR TCA 90 bp CTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAGCATGTTTTTGTAGCAATTCTGTGTaGGGAGTGCAAGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: LPSWKMEDAQACTRAACFCSNSV*GVQGDQ
Trigger: CTGGTCACCTTGCACTCCTCACACAGAATTGCTACA...AAAACATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp GCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGTTGATGTCAACAAGCGATGTCAACAAGCAGTaGCTGAACCACCCCGGAGCA +
Preference number: 4 (lower is better)
Translates to: ARTVPVHMSAIAMLMSTSDVNKQ*LNHPGA
Trigger: TGCTCCGGGGTGGTTCAGTCACTGCTTGTTGACATC...GCTTGTTGACATCAACATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp GCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGATTTGCTTTAGGGTTCCTGTGGGTGAGATTGAATGCTaGGTGATCCTTTGTCCGCTG +
Preference number: 4 (lower is better)
Translates to: ASPASVPPRWQICFRVPVGEIEC*VILCPL
Trigger: CAGCGGACAAAGGATCACTCAGCATTCAATCTCACC...CACAGGAACCCTAAAGCAAATCTGCCACCGTGGGGGAACTGACGCTGGAGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397092.5
CDS-3UTR GCA 90 bp AGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGATTTGCTTTAGGGCATGTCTCTGCACCGTaGAGCTTTCAAGATTTGCCG +
Preference number: 4 (lower is better)
Translates to: STLHLQRQFPHGGRFALGHVSAP*SFQDLP
Trigger: CGGCAAATCTTGAAAGCTGCACGGTGCAGAGACATG...CCCTAAAGCAAATCTGCCACCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAGCATCTGTACATGTTGACCTaGAGGAAGAGCGACATGAAG +
Preference number: 4 (lower is better)
Translates to: HCCHPGRWRTLRRAPEQHLYMLT*RKSDMK
Trigger: CTTCATGTCGCTCTTCCTGCAGGTCAACATGTACAG...ATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GGGAAGGTTTTTACATCATCACCGCAGTTGTCCCCAGCTGTTATTTCTGTAGAACAGGCCTCGTCGGTGTaGTGCAGGTGCACGGCGGTG +
Preference number: 4 (lower is better)
Translates to: GKVFTSSPQLSPAVISVEQASSV*CRCTAV
Trigger: CACCGCCGTGCACCTGCAGCACACCGACGAGGCCTG...TTCTACAGAAATAACAGCTGGGGACAACTGCGGTGATGATGTAAAAACCTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTGCTGGAGTATTCCACCGCGAGGATCATaGGGAGCGCCTTCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: PSCYFCRNKFVSHRCWSIPPRGS*GAPSAA
Trigger: GGCGGCAGAAGGCGCTCCGCATGATCCTCGCGGTGG...AATACTCCAGCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp AGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTGGCAAATTTGTTTTCTaGTCAATGTACAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: RTHRDVQLRPTSTLHLQRGKFVF*SMYSLS
Trigger: GCTGAGGCTGTACATTGAGCAGAAAACAAATTTGCC...ACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp GCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGTTGATGTCAACAAGCGTCAGAAATGTTTCCTaGAGCGGCAGGCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: ARTVPVHMSAIAMLMSTSVRNVS*SGRQVQ
Trigger: CTGCACCTGCCTGCCGCTGCAGGAAACATTTCTGAC...GCTTGTTGACATCAACATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp TTTATGGGAAGGTTTTTACATCATCACCGCAGTTGTCCCCAGCTGTTATTTCTGCGGCTGGCTGGCGGGTaGGTCCTCCCTCTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: FMGRFLHHHRSCPQLLFLRLAGG*VLPLSQ
Trigger: CTGGCTCAGAGGGAGGACGCACCCGCCAGCCAGCCG...CAGAAATAACAGCTGGGGACAACTGCGGTGATGATGTAAAAACCTTCCCATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397088.4
CDS-3UTR CCA 90 bp AGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGATTTGCTTTAGGGGCACCTGTGGTGGTTTaGGTTGGGTTTGTTAACTGC +
Preference number: 4 (lower is better)
Translates to: STLHLQRQFPHGGRFALGAPVVV*VGFVNC
Trigger: GCAGTTAACAAACCCAACCCAAACCACCACAGGTGC...CCCTAAAGCAAATCTGCCACCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp CACACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGTTGATGGAGGAGCACCTGTGGTaGTTTGGGTTGGGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: HTAARTVPVHMSAIAMLMEEHLW*FGLGLL
Trigger: TAACAAACCCAACCCAAACCACCACAGGTGCTCCTC...CATCAACATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp AAATTCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACAGCTGGGTGACAGGCTaGTCACCGCTGGCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: KFVSHRCWSISLSWHPTNSWVTG*SPLAFG
Trigger: TCCAAAGGCCAGCGGTGACCAGCCTGTCACCCAGCT...GTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGAATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp TTCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACCCACCATTGCTGCCATCCTaGAAGATGGAGGACGCTCAG +
Preference number: 4 (lower is better)
Translates to: FVSHRCWSISLSWHPTNPPLLPS*KMEDAQ
Trigger: CTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGG...TGGGTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp TGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAGCATGTTTTCGTCAGCCACAGGTGCTaGAGTATTTCATTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: CHPGRWRTLRRAPEQHVFVSHRC*SISLSW
Trigger: CCAGGACAATGAAATACTCCAGCACCTGTGGCTGAC...GAAAACATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
3UTR CAA 72 bp AACAAATTCGTCAGCCACAGGTGCTGGAGTATTTCATaGTCCTGGCACCCGACTAACCCACACGGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: NKFVSHRCWSIS*SWHPTNPHGSS
Trigger: CGAGCTGCCGTGTGGGTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGAATTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp CACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGTTGATGTCAAGCGTGATTCTCCTTaGAGTGAGCCTGGCATTTGT +
Preference number: 4 (lower is better)
Translates to: HGSSHGPSPHECNCHVDVKRDSP*SEPGIC
Trigger: ACAAATGCCAGGCTCACTTCAAGGAGAATCACGCTT...GACATCAACATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR TCA 90 bp CTCTCCGTGTGGCTTTCCTGGTCGACGGTGTCAGAAATGTTTCCTGCAGCGGCAAAGCGTGATTCTCCTTaGAGTGAGCCTGGCATTTGT +
Preference number: 4 (lower is better)
Translates to: LSVWLSWSTVSEMFPAAAKRDSP*SEPGIC
Trigger: ACAAATGCCAGGCTCACTTCAAGGAGAATCACGCTT...TGCCGCTGCAGGAAACATTTCTGACACCGTCGACCAGGAAAGCCACACGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR TCA 90 bp TTCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACCCATCTTCTCGCGGAAGCTaGTGTTCACCACCAGGATCA +
Preference number: 4 (lower is better)
Translates to: FVSHRCWSISLSWHPTNPSSRGS*CSPPGS
Trigger: TGATCCTGGTGGTGAACATCAGCTTCCGCGAGAAGA...TGGGTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GGGAAGGTTTTTACATCATCACCGCAGTTGTCCCCAGCTGTTATTTCTGTAGAATCGGTGTGCTGCAGGTaGACGGCGGTGAAGGGCACC +
Preference number: 4 (lower is better)
Translates to: GKVFTSSPQLSPAVISVESVCCR*TAVKGT
Trigger: GGTGCCCTTCACCGCCGTGCACCTGCAGCACACCGA...TTCTACAGAAATAACAGCTGGGGACAACTGCGGTGATGATGTAAAAACCTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp CCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTGCTGGAGTATTCGCTTCGGGAACCGATaGCCGCCCCATGAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: PSCYFCRNKFVSHRCWSIRFGNR*PPHEGR
Trigger: TCTGCCCTCATGGGGCGGCCATCGGTTCCCGAAGCG...AATACTCCAGCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297469.3
ENST00000397092.5
CDS-3UTR CCA 90 bp GCAGTTGTCCCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTGCCTGCCGTCCAGATGTTaGTGGCCTCTTCCCCACCAG +
Preference number: 4 (lower is better)
Translates to: AVVPSCYFCRNKFVSHRCLPSRC*WPLPHQ
Trigger: CTGGTGGGGAAGAGGCCACCAACATCTGGACGGCAG...GCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGGGACAACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297469.3
ENST00000397092.5
CDS-3UTR CCA 90 bp CCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTGCTGGAGTATTAGGCTGCGCGGTGCCTaGGTACATCTCCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: PSCYFCRNKFVSHRCWSIRLRGA*VHLQAH
Trigger: GTGGGCCTGGAGATGTACCCAGGCACCGCGCAGCCT...AATACTCCAGCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp GGGAAGGTTTTTACATCATCACCGCAGTTGTCCCCAGCTGTTATTTCTGTAGAATGCAGCGCATGGCCCTaGCCAGGGCGATGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: GKVFTSSPQLSPAVISVECSAWP*PGRCSG
Trigger: ACCGCTACATCGCCCTGGCCAGGGCCATGCGCTGCA...TTCTACAGAAATAACAGCTGGGGACAACTGCGGTGATGATGTAAAAACCTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp CCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTGCTGGAGTATTACAGGCTGCAGCGCATaGCCCTGGCCAGGGCGATGT +
Preference number: 4 (lower is better)
Translates to: PSCYFCRNKFVSHRCWSITGCSA*PWPGRC
Trigger: ACATCGCCCTGGCCAGGGCCATGCGCTGCAGCCTGT...AATACTCCAGCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp TTCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACCCATCCGTGTGGCTTTCCTaGTCGACGGTGTCAGAAATG +
Preference number: 4 (lower is better)
Translates to: FVSHRCWSISLSWHPTNPSVWLS*STVSEM
Trigger: CATTTCTGACACCGTCGACCAGGAAAGCCACACGGA...TGGGTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp TTCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACCCATGTAGCAATTCTGTGTaGGGAGTGCAAGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: FVSHRCWSISLSWHPTNPCSNSV*GVQGDQ
Trigger: CTGGTCACCTTGCACTCCTCACACAGAATTGCTACA...TGGGTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp GCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGATTTGCTTTAGGGTTCCTGTGTTTATTGACAAAGGCTaGACGTCACCAGCCTCATCA +
Preference number: 4 (lower is better)
Translates to: ASPASVPPRWQICFRVPVFIDKG*TSPASS
Trigger: TGATGAGGCTGGTGACGTTCAGCCTTTGTCAATAAA...CACAGGAACCCTAAAGCAAATCTGCCACCGTGGGGGAACTGACGCTGGAGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp AAGGCTGAACGTCACCAGCCTCATCAGCTTTTCTTACATTTTATGGGAAGGTTTGACCTGCCGAATGCCTaGGCAGGGCTGCCGTCCAGA +
Preference number: 4 (lower is better)
Translates to: KAERHQPHQLFLHFMGRFDLPNA*AGLPSR
Trigger: TCTGGACGGCAGCCCTGCTCAGGCATTCGGCAGGTC...AAACCTTCCCATAAAATGTAAGAAAAGCTGATGAGGCTGGTGACGTTCAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397092.5
CDS-3UTR GCA 90 bp GTGCACCAGAGCAGCATGTTTTCCTTCTCCTCTTTAACTCGGCGGTGCGCTAGCTCACATCCATGTCTCTaGACCGTGCAGCTTTCAAGA +
Preference number: 4 (lower is better)
Translates to: VHQSSMFSFSSLTRRCASSHPCL*TVQLSR
Trigger: TCTTGAAAGCTGCACGGTGCAGAGACATGGATGTGA...GCTAGCGCACCGCCGAGTTAAAGAGGAGAAGGAAAACATGCTGCTCTGGTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp TTTATGGGAAGGTTTTTACATCATCACCGCAGTTGTCCCCAGCTGTTATTTCTGGGCGGAAAGACTGCTTaGAGGGAGCGGCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: FMGRFLHHHRSCPQLLFLGGKTA*RERPQA
Trigger: AGCCTGGGGCCGCTCCCTGCAAGCAGTCTTTCCGCC...CAGAAATAACAGCTGGGGACAACTGCGGTGATGATGTAAAAACCTTCCCATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp GCAGTTGTCCCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTGCTCTGGGTACCTGGGTTaGAGCCCCTTCTGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: AVVPSCYFCRNKFVSHRCSGYLG*SPFCAP
Trigger: AGGAGCACAGAAGGGGCTGCAACCCAGGTACCCAGA...GCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGGGACAACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp TTATGGGAAGGTTTTTACATCATCACCGCAGTTGTCCCCAGCTGTTATTTCTGTTGCAGCGCATGGCCCTaGCCAGGGCGATGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: LWEGFYIITAVVPSCYFCCSAWP*PGRCSG
Trigger: ACCGCTACATCGCCCTGGCCAGGGCCATGCGCTGCA...ACAGAAATAACAGCTGGGGACAACTGCGGTGATGATGTAAAAACCTTCCCATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp TTTATGGGAAGGTTTTTACATCATCACCGCAGTTGTCCCCAGCTGTTATTTCTGCAGCTCAGCCGGGCGTaGTGCTTGGTGCGGAACAGG +
Preference number: 4 (lower is better)
Translates to: FMGRFLHHHRSCPQLLFLQLSRA*CLVRNR
Trigger: CCTGTTCCGCACCAAGCACCACGCCCGGCTGAGCTG...CAGAAATAACAGCTGGGGACAACTGCGGTGATGATGTAAAAACCTTCCCATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp GTTGTCCCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTGCTGGGATGTCAACAAGCAGTaGCTGAACCACCCCGGAGCA +
Preference number: 4 (lower is better)
Translates to: VVPSCYFCRNKFVSHRCWDVNKQ*LNHPGA
Trigger: TGCTCCGGGGTGGTTCAGTCACTGCTTGTTGACATC...CCAGCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGGGACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp TCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACCCACTTTATTGACAAAGGCTaGACGTCACCAGCCTCATCA +
Preference number: 4 (lower is better)
Translates to: SSATGAGVFHCPGTRLTHFIDKG*TSPASS
Trigger: TGATGAGGCTGGTGACGTTCAGCCTTTGTCAATAAA...GTGGGTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp AAATTCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACAACCTCACATCCGACTaGTCGGTGCTGTCTGGAATG +
Preference number: 4 (lower is better)
Translates to: KFVSHRCWSISLSWHPTNNLTSD*SVLSGM
Trigger: CATTCCAGACAGCACCGAGCAGTCGGATGTGAGGTT...GTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp GGGAAGGTTTTTACATCATCACCGCAGTTGTCCCCAGCTGTTATTTCTGTAGAACTGCCGTCCAGATGTTaGTGGCCTCTTCCCCACCAG +
Preference number: 4 (lower is better)
Translates to: GKVFTSSPQLSPAVISVELPSRC*WPLPHQ
Trigger: CTGGTGGGGAAGAGGCCACCAACATCTGGACGGCAG...TTCTACAGAAATAACAGCTGGGGACAACTGCGGTGATGATGTAAAAACCTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297469.3
ENST00000397092.5
CDS-3UTR CCA 90 bp TTTATGGGAAGGTTTTTACATCATCACCGCAGTTGTCCCCAGCTGTTATTTCTGGAGTCACACCCTGGCTaGGCCTATGCGGCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: FMGRFLHHHRSCPQLLFLESHPG*AYAAKA
Trigger: AGCCTTGGCCGCATAGGCCCAGCCAGGGTGTGACTC...CAGAAATAACAGCTGGGGACAACTGCGGTGATGATGTAAAAACCTTCCCATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR TCA 90 bp TTCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACCCAGTGCAATTGCCATGTTaGTGTCAACAAGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: FVSHRCWSISLSWHPTNPVQLPC*CQQAVT
Trigger: AGTCACTGCTTGTTGACATCAACATGGCAATTGCAC...TGGGTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp TTTATGGGAAGGTTTTTACATCATCACCGCAGTTGTCCCCAGCTGTTATTTCTGGACCTGCCGAATGCCTaGGCAGGGCTAGAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: FMGRFLHHHRSCPQLLFLDLPNA*AGLERG
Trigger: TCCTCTCTCTAGCCCTGCTCAGGCATTCGGCAGGTC...CAGAAATAACAGCTGGGGACAACTGCGGTGATGATGTAAAAACCTTCCCATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397088.4
CDS-3UTR GCA 90 bp TCATCACCGCAGTTGTCCCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCCCAGGATCAGGATGTTaGCCACAAAGCCGATGGGGA +
Preference number: 4 (lower is better)
Translates to: SSPQLSPAVISVETNSSAPGSGC*PQSRWG
Trigger: TCCCCATCGGCTTTGTGGGCAACATCCTGATCCTGG...GGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGGGACAACTGCGGTGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp GGGAAGGTTTTTACATCATCACCGCAGTTGTCCCCAGCTGTTATTTCTGTAGAAGAGCTGCTCACTCTCTaGGTACCTGCCGTCCAGATG +
Preference number: 4 (lower is better)
Translates to: GKVFTSSPQLSPAVISVEELLTL*VPAVQM
Trigger: CATCTGGACGGCAGGTACCCAGAGAGTGAGCAGCTC...TTCTACAGAAATAACAGCTGGGGACAACTGCGGTGATGATGTAAAAACCTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297469.3
CDS-3UTR CCA 90 bp GTTGTCCCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTGCTGGTCCGTGTGGCTTTCCTaGTCGACGGTGTCAGAAATG +
Preference number: 4 (lower is better)
Translates to: VVPSCYFCRNKFVSHRCWSVWLS*STVSEM
Trigger: CATTTCTGACACCGTCGACCAGGAAAGCCACACGGA...CCAGCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGGGACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp TTATGGGAAGGTTTTTACATCATCACCGCAGTTGTCCCCAGCTGTTATTTCTGTAGTGGCCTCTCCGTGTaGCTTTCCTGGTCGACGGTG +
Preference number: 4 (lower is better)
Translates to: LWEGFYIITAVVPSCYFCSGLSV*LSWSTV
Trigger: CACCGTCGACCAGGAAAGCCACACGGAGAGGCCACT...ACAGAAATAACAGCTGGGGACAACTGCGGTGATGATGTAAAAACCTTCCCATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTGCTGGAGTATTGTCAGAAATGTTTCCTaGAGCGGCAGGCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: PSCYFCRNKFVSHRCWSIVRNVS*SGRQVQ
Trigger: CTGCACCTGCCTGCCGCTGCAGGAAACATTTCTGAC...AATACTCCAGCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp TTATGGGAAGGTTTTTACATCATCACCGCAGTTGTCCCCAGCTGTTATTTCTGTCAGGAGGTGTACCTCTaGTGGACCTGCCGAATGCCT +
Preference number: 4 (lower is better)
Translates to: LWEGFYIITAVVPSCYFCQEVYL*WTCRMP
Trigger: AGGCATTCGGCAGGTCCAGCAGAGGTACACCTCCTG...ACAGAAATAACAGCTGGGGACAACTGCGGTGATGATGTAAAAACCTTCCCATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CCA 90 bp AAATTCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACAGTATTTCATTGTCCTaGCACCCGACTAACCCACAC +
Preference number: 4 (lower is better)
Translates to: KFVSHRCWSISLSWHPTNSISLS*HPTNPH
Trigger: GTGTGGGTTAGTCGGGTGCCAGGACAATGAAATACT...GTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp GTTGTCCCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTGCTGGGTCAGCCACAGGTGCTaGAGTATTTCATTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: VVPSCYFCRNKFVSHRCWVSHRC*SISLSW
Trigger: CCAGGACAATGAAATACTCCAGCACCTGTGGCTGAC...CCAGCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGGGACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR TCA 90 bp GGGAAGGTTTTTACATCATCACCGCAGTTGTCCCCAGCTGTTATTTCTGTAGAATCTTCTCGCGGAAGCTaGTGTTCACCACCAGGATCA +
Preference number: 4 (lower is better)
Translates to: GKVFTSSPQLSPAVISVESSRGS*CSPPGS
Trigger: TGATCCTGGTGGTGAACATCAGCTTCCGCGAGAAGA...TTCTACAGAAATAACAGCTGGGGACAACTGCGGTGATGATGTAAAAACCTTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp TTTATGGGAAGGTTTTTACATCATCACCGCAGTTGTCCCCAGCTGTTATTTCTGAGTACAGGTCGGGGATaGTCATCTTCTCGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: FMGRFLHHHRSCPQLLFLSTGRG*SSSRGS
Trigger: GCTTCCGCGAGAAGATGACCATCCCCGACCTGTACT...CAGAAATAACAGCTGGGGACAACTGCGGTGATGATGTAAAAACCTTCCCATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CCA 90 bp TTTATGGGAAGGTTTTTACATCATCACCGCAGTTGTCCCCAGCTGTTATTTCTGGCGGGGCGAGCGCTTTaGGATTGTAGCAATTCTGTG +
Preference number: 4 (lower is better)
Translates to: FMGRFLHHHRSCPQLLFLAGRAL*DCSNSV
Trigger: CACAGAATTGCTACAATCCCAAAGCGCTCGCCCCGC...CAGAAATAACAGCTGGGGACAACTGCGGTGATGATGTAAAAACCTTCCCATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp TTATGGGAAGGTTTTTACATCATCACCGCAGTTGTCCCCAGCTGTTATTTCTGTAGTGGGAAGAACAGATaGTCCTCACACCGGCATGGT +
Preference number: 4 (lower is better)
Translates to: LWEGFYIITAVVPSCYFCSGKNR*SSHRHG
Trigger: ACCATGCCGGTGTGAGGAGCATCTGTTCTTCCCACT...ACAGAAATAACAGCTGGGGACAACTGCGGTGATGATGTAAAAACCTTCCCATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR GCA 90 bp CCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTGCTGGAGTATTGCAGCTTTCAAGATTTaGCGAAAGGCTCCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: PSCYFCRNKFVSHRCWSIAAFKI*RKAPRA
Trigger: AGCTCTGGGAGCCTTTCGGCAAATCTTGAAAGCTGC...AATACTCCAGCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp TCATCACCGCAGTTGTCCCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCCCCAGTCCACATGAGTaGAATTGCCATGTTGATGTC +
Preference number: 4 (lower is better)
Translates to: SSPQLSPAVISVETNSSAPSPHE*NCHVDV
Trigger: GACATCAACATGGCAATTGCACTCATGTGGACTGGG...GGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGGGACAACTGCGGTGATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTGCTGGAGTATTCTGTACATGTTGACCTaGAGGAAGAGCGACATGAAG +
Preference number: 4 (lower is better)
Translates to: PSCYFCRNKFVSHRCWSILYMLT*RKSDMK
Trigger: CTTCATGTCGCTCTTCCTGCAGGTCAACATGTACAG...AATACTCCAGCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR GCA 90 bp CCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTGCTGGAGTATTCCCAGTCCACATGAGTaGAATTGCCATGTTGATGTC +
Preference number: 4 (lower is better)
Translates to: PSCYFCRNKFVSHRCWSIPSPHE*NCHVDV
Trigger: GACATCAACATGGCAATTGCACTCATGTGGACTGGG...AATACTCCAGCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS GCA 90 bp CCGTGGAGGCGAGGGCCCTCCGCGTGCTCGTCCGGCGGGCGTCCCTaGGGGTGTCGGCCACCGTGCACAGTCCCGCGTGGAGCTGCTCAC +
Preference number: 5 (lower is better)
Translates to: PWRRGPSACSSGGRP*GCRPPCTVPRGAAH
Trigger: GTGAGCAGCTCCACGCGGGACTGTGCACGGTGGCCGACACCCGCAGGGACGCCCGCCGGACGAGCACGCGGAGGGCCCTCGCCTCCACGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5
CDS-3UTR CAA 90 bp CGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGCCGAGCGCTGCTGCGGTCACCGCTGGCCTTaGGACCCTGCGGGGCGAGCG +
Preference number: 5 (lower is better)
Translates to: RRALHRGAFLLLRAERCCGHRWP*DPAGRA
Trigger: CGCTCGCCCCGCAGGGTCCAAAGGCCAGCGGTGACC...GCAGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS GCA 90 bp CCTCACACCGGCATGGTGCATCCGTGGAGGCGAGGGCCCTCCGCGTaGTCGTCCGGCGGGCGTCCCTGCGGGTGTCGGCCACCGTGCACA +
Preference number: 5 (lower is better)
Translates to: PHTGMVHPWRRGPSA*SSGGRPCGCRPPCT
Trigger: TGTGCACGGTGGCCGACACCCGCAGGGACGCCCGCCGGACGAGCACGCGGAGGGCCCTCGCCTCCACGGATGCACCATGCCGGTGTGAGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5
CDS-3UTR CAA 90 bp CGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGCCGAGCGCTGCTGCAGCGGGTGGGACAGGTaGAGCTCGGGGGAGGTGGTG +
Preference number: 5 (lower is better)
Translates to: RRALHRGAFLLLRAERCCSGWDR*SSGEVV
Trigger: CACCACCTCCCCCGAGCTCAACCTGTCCCACCCGCT...GCAGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CAA 90 bp GCTCCGGGCCGAGCGCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCGCCCACGCCCCGGGCTaGGGAAGTCACATCCATGTC +
Preference number: 5 (lower is better)
Translates to: APGRALLLLVGLVRPHSAAHAPG*GSHIHV
Trigger: GACATGGATGTGACTTCCCAAGCCCGGGGCGTGGGC...GGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGCGCTCGGCCCGGAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS GCA 90 bp ACGAAGAAGACCAGCACCACCGCGAGGATCATGCGGAGCGCCTTCTaGCGCCGGGGCCGCAGCCCACGGTGCCGGTGCGCCCTGACCAGC +
Preference number: 5 (lower is better)
Translates to: TKKTSTTARIMRSAF*RRGRSPRCRCALTS
Trigger: GCTGGTCAGGGCGCACCGGCACCGTGGGCTGCGGCCCCGGCGGCAGAAGGCGCTCCGCATGATCCTCGCGGTGGTGCTGGTCTTCTTCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000617001.1
CDS GCA 90 bp TCCGCGTGCTCGTCCGGCGGGCGTCCCTGCGGGTGTCGGCCACCGTaGACAGTCCCGCGTGGAGCTGCTCACTCTCTGGGTACCGTGAGG +
Preference number: 5 (lower is better)
Translates to: SACSSGGRPCGCRPP*TVPRGAAHSLGTVR
Trigger: CCTCACGGTACCCAGAGAGTGAGCAGCTCCACGCGGGACTGTGCACGGTGGCCGACACCCGCAGGGACGCCCGCCGGACGAGCACGCGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401670.1
CDS CCA 90 bp CGGCGGGCGTCCCTGCGGGTGTCGGCCACCGTGCACAGTCCCGCGTaGAGCTGCTCACTCTCTGGGTACCGTGAGGGGACGTCCACCTGC +
Preference number: 5 (lower is better)
Translates to: RRASLRVSATVHSPA*SCSLSGYREGTSTC
Trigger: GCAGGTGGACGTCCCCTCACGGTACCCAGAGAGTGAGCAGCTCCACGCGGGACTGTGCACGGTGGCCGACACCCGCAGGGACGCCCGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401670.1
CDS GCA 90 bp TCCGCGTGCTCGTCCGGCGGGCGTCCCTGCGGGTGTCGGCCACCGTaGACAGTCCCGCGTGGAGCTGCTCACTCTCTGGGTACCTGGGTT +
Preference number: 5 (lower is better)
Translates to: SACSSGGRPCGCRPP*TVPRGAAHSLGTWV
Trigger: AACCCAGGTACCCAGAGAGTGAGCAGCTCCACGCGGGACTGTGCACGGTGGCCGACACCCGCAGGGACGCCCGCCGGACGAGCACGCGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397088.4
ENST00000397092.5
ENST00000413368.5
CDS-3UTR CAA 90 bp CGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGCCGAGCGCTGCTGCGGGTTTAGGCAGCTGTaGGAGAAGGCGGCGAGGTTG +
Preference number: 5 (lower is better)
Translates to: RRALHRGAFLLLRAERCCGFRQL*EKAARL
Trigger: CAACCTCGCCGCCTTCTCCAACAGCTGCCTAAACCC...GCAGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CAA 90 bp CACCCCGGAGCAGACGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGAGGCTGGAGGTGCACTaGGAACCCGCTGCAGGAGGT +
Preference number: 5 (lower is better)
Translates to: HPGADGGRSTEGPSCCSGRLEVH*EPAAGG
Trigger: ACCTCCTGCAGCGGGTTCCAAGTGCACCTCCAGCCT...CCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCGTCTGCTCCGGGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397088.4
ENST00000397092.5
CDS CCA 90 bp CGGCGGGCGTCCCTGCGGGTGTCGGCCACCGTGCACAGTCCCGCGTaGAGCTGCTCACTCTCTGGGTACCTGGGTTGCAGCCCCTTCTGT +
Preference number: 5 (lower is better)
Translates to: RRASLRVSATVHSPA*SCSLSGYLGCSPFC
Trigger: ACAGAAGGGGCTGCAACCCAGGTACCCAGAGAGTGAGCAGCTCCACGCGGGACTGTGCACGGTGGCCGACACCCGCAGGGACGCCCGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397088.4
ENST00000397092.5
ENST00000413368.5
CDS-3UTR CAA 90 bp CGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGCCGAGCGCTGCTGCACCAGGATCAGGATGTaGCCCACAAAGCCGATGGGG +
Preference number: 5 (lower is better)
Translates to: RRALHRGAFLLLRAERCCTRIRM*PTKPMG
Trigger: CCCCATCGGCTTTGTGGGCAACATCCTGATCCTGGT...GCAGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CAA 90 bp GGCCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCGGTCACCGCTGGCCTTaGGACCCTGCGGGGCGAGCG +
Preference number: 5 (lower is better)
Translates to: GLVRPHSAIAAILEDGGRGHRWP*DPAGRA
Trigger: CGCTCGCCCCGCAGGGTCCAAAGGCCAGCGGTGACC...GCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS CCA 90 bp AGAGTGGGAAGAACAGATGCTCCTCACACCGGCATGGTGCATCCGTaGAGGCGAGGGCCCTCCGCGTGCTCGTCCGGCGGGCGTCCCTGC +
Preference number: 5 (lower is better)
Translates to: RVGRTDAPHTGMVHP*RRGPSACSSGGRPC
Trigger: GCAGGGACGCCCGCCGGACGAGCACGCGGAGGGCCCTCGCCTCCACGGATGCACCATGCCGGTGTGAGGAGCATCTGTTCTTCCCACTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5
CDS CCA 90 bp GAGAAGGCGGCGAGGTTGACAATGTGGCCCGTGAGGGGGTGGGCATaGCGGAAAGACTGCTTGCAGGGAGCGGCCCCAGGCTGCGTCCGC +
Preference number: 5 (lower is better)
Translates to: EKAARLTMWPVRGWA*RKDCLQGAAPGCVR
Trigger: GCGGACGCAGCCTGGGGCCGCTCCCTGCAAGCAGTCTTTCCGCCATGCCCACCCCCTCACGGGCCACATTGTCAACCTCGCCGCCTTCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
CDS-3UTR CAA 90 bp GCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGCCGAGCGCTGCTGCTCCTCGTGGCTGCCGTCCAGATGTaGGTGGCCTCTTCCCCACCA +
Preference number: 5 (lower is better)
Translates to: APQRGLPAAPGRALLLLVAAVQM*VASSPP
Trigger: TGGTGGGGAAGAGGCCACCAACATCTGGACGGCAGC...CACGAGGAGCAGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397092.5
CDS TCA 90 bp GTCGGTGTGCTGCAGGTGCACGGCGGTGAAGGGCACCAGCGTGGCTaGCACGGATGCCATCCAGATGAGGCCACAGCTCAGCCGGGCGTG +
Preference number: 5 (lower is better)
Translates to: VGVLQVHGGEGHQRG*HGCHPDEATAQPGV
Trigger: CACGCCCGGCTGAGCTGTGGCCTCATCTGGATGGCATCCGTGTCAGCCACGCTGGTGCCCTTCACCGCCGTGCACCTGCAGCACACCGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000617001.1
CDS CCA 90 bp GCTGACACGGATGCCATCCAGATGAGGCCACAGCTCAGCCGGGCGTaGTGCTTGGTGCGGAACAGGCTGCAGCGCATGGCCCTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: ADTDAIQMRPQLSRA*CLVRNRLQRMALAR
Trigger: CCTGGCCAGGGCCATGCGCTGCAGCCTGTTCCGCACCAAGCACCACGCCCGGCTGAGCTGTGGCCTCATCTGGATGGCATCCGTGTCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000617001.1
CDS-3UTR CAA 90 bp GGGCCGAGCGCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTGCACCAGGATCAGGATGTaGCCCACAAAGCCGATGGGG +
Preference number: 5 (lower is better)
Translates to: GPSAAAPRGPGEAAQRHCTRIRM*PTKPMG
Trigger: CCCCATCGGCTTTGTGGGCAACATCCTGATCCTGGT...GCAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGCGCTCGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS GCA 90 bp AACTGCAGAGAGTGGGAAGAACAGATGCTCCTCACACCGGCATGGTaGATCCGTGGAGGCGAGGGCCCTCCGCGTGCTCGTCCGGCGGGC +
Preference number: 5 (lower is better)
Translates to: NCREWEEQMLLTPAW*IRGGEGPPRARPAG
Trigger: GCCCGCCGGACGAGCACGCGGAGGGCCCTCGCCTCCACGGATGCACCATGCCGGTGTGAGGAGCATCTGTTCTTCCCACTCTCTGCAGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5
CDS GCA 90 bp TGCACCTCCCGGACATCCGCGAAACAGAAGCAGGCCTCGTCGGTGTaGTGCAGGTGCACGGCGGTGAAGGGCACCAGCGTGGCTGACACG +
Preference number: 5 (lower is better)
Translates to: CTSRTSAKQKQASSV*CRCTAVKGTSVADT
Trigger: CGTGTCAGCCACGCTGGTGCCCTTCACCGCCGTGCACCTGCAGCACACCGACGAGGCCTGCTTCTGTTTCGCGGATGTCCGGGAGGTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000617001.1
CDS GCA 90 bp TGGCGGAAAGACTGCTTGCAGGGAGCGGCCCCAGGCTGCGTCCGCTaGAGGAGGTGCACGCTGATGAAGACGTTCTCCGGCAGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: WRKDCLQGAAPGCVR*RRCTLMKTFSGSQQ
Trigger: CTGCTGGCTGCCGGAGAACGTCTTCATCAGCGTGCACCTCCTGCAGCGGACGCAGCCTGGGGCCGCTCCCTGCAAGCAGTCTTTCCGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000617001.1
CDS CCA 90 bp CTGTTGGAGAAGGCGGCGAGGTTGACAATGTGGCCCGTGAGGGGGTaGGCATGGCGGAAAGACTGCTTGCAGGGAGCGGCCCCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: LLEKAARLTMWPVRG*AWRKDCLQGAAPGC
Trigger: GCAGCCTGGGGCCGCTCCCTGCAAGCAGTCTTTCCGCCATGCCCACCCCCTCACGGGCCACATTGTCAACCTCGCCGCCTTCTCCAACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
CDS-3UTR CAA 90 bp GCTCCGGGCCGAGCGCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCTGGTTTGGGTTGGGTTaGTTAACTGCAGAGAGTGGG +
Preference number: 5 (lower is better)
Translates to: APGRALLLLVGLVRPHSAWFGLG*LTAESG
Trigger: CCCACTCTCTGCAGTTAACAAACCCAACCCAAACCA...GGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGCGCTCGGCCCGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CAA 90 bp ACGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCCGGGCCGAGCGCTGCTGTGCAGCTTTCAAGATTaGCCGAAAGGCTCCCAGAGC +
Preference number: 5 (lower is better)
Translates to: TAGAPQRGLPAAPGRALLCSFQD*PKGSQS
Trigger: GCTCTGGGAGCCTTTCGGCAAATCTTGAAAGCTGCA...CAGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS TCA 90 bp GCAAGCGTGACCCTCGCGAGGCCCCGAGGAGCCAGAAGCCACATCTaGCCGCAGTTTAGAGACATGACGTGGCCGTGCGTGAGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: ASVTLARPRGARSHI*PQFRDMTWPCVRGW
Trigger: CCACCCCCTCACGCACGGCCACGTCATGTCTCTAAACTGCGGTCAGATGTGGCTTCTGGCTCCTCGGGGCCTCGCGAGGGTCACGCTTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617001.1
CDS GCA 90 bp CGGACATCCGCGAAACAGAAGCAGGCCTCGTCGGTGTGCTGCAGGTaGACGGCGGTGAAGGGCACCAGCGTGGCTGACACGGATGCCATC +
Preference number: 5 (lower is better)
Translates to: RTSAKQKQASSVCCR*TAVKGTSVADTDAI
Trigger: GATGGCATCCGTGTCAGCCACGCTGGTGCCCTTCACCGCCGTGCACCTGCAGCACACCGACGAGGCCTGCTTCTGTTTCGCGGATGTCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000617001.1
CDS GCA 90 bp ACCTCCCGGACATCCGCGAAACAGAAGCAGGCCTCGTCGGTGTGCTaGAGGTGCACGGCGGTGAAGGGCACCAGCGTGGCTGACACGGAT +
Preference number: 5 (lower is better)
Translates to: TSRTSAKQKQASSVC*RCTAVKGTSVADTD
Trigger: ATCCGTGTCAGCCACGCTGGTGCCCTTCACCGCCGTGCACCTGCAGCACACCGACGAGGCCTGCTTCTGTTTCGCGGATGTCCGGGAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000617001.1
CDS-3UTR CAA 90 bp CCGGGCCGAGCGCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTCCCCCTACTGGCCATTaGAATTTTCACTCGCCGCTT +
Preference number: 5 (lower is better)
Translates to: PGRALLLLVGLVRPHSAIPPTGH*NFHSPL
Trigger: AAGCGGCGAGTGAAAATTCAAATGGCCAGTAGGGGG...AATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGCGCTCGGCCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297469.3
ENST00000397092.5
CDS-3UTR CAA 90 bp GAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCCCACGCCCCGGGCTaGGGAAGTCACATCCATGTC +
Preference number: 5 (lower is better)
Translates to: EAAQRHCCHPGRWRTLRRAHAPG*GSHIHV
Trigger: GACATGGATGTGACTTCCCAAGCCCGGGGCGTGGGC...ACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CAA 90 bp GGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGGCCCACGCCCCGGGCTaGGGAAGTCACATCCATGTC +
Preference number: 5 (lower is better)
Translates to: GEAAQRHCCHPGRWRTLRAHAPG*GSHIHV
Trigger: GACATGGATGTGACTTCCCAAGCCCGGGGCGTGGGC...CCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CAA 90 bp GAACCACCCCGGAGCAGACGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCACGCTGCTGTACATGTaGACCTGCAGGAAGAGCGAC +
Preference number: 5 (lower is better)
Translates to: EPPRSRRRALHRGAFLLLTLLYM*TCRKSD
Trigger: GTCGCTCTTCCTGCAGGTCAACATGTACAGCAGCGT...GAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCGTCTGCTCCGGGGTGGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CAA 90 bp TCCACAGAGGGGCCTTCCTGCTGCTCCGGGCCGAGCGCTGCTGCTCCTCGTGGGACGCTGCTGTACATGTaGACCTGCAGGAAGAGCGAC +
Preference number: 5 (lower is better)
Translates to: STEGPSCCSGPSAAAPRGTLLYM*TCRKSD
Trigger: GTCGCTCTTCCTGCAGGTCAACATGTACAGCAGCGT...CCCACGAGGAGCAGCAGCGCTCGGCCCGGAGCAGCAGGAAGGCCCCTCTGTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CAA 90 bp GGCCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCGAGAAGGCGGCGAGGTaGACAATGTGGCCCGTGAGG +
Preference number: 5 (lower is better)
Translates to: GLVRPHSAIAAILEDGGREKAAR*TMWPVR
Trigger: CCTCACGGGCCACATTGTCAACCTCGCCGCCTTCTC...GCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CAA 90 bp GCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGGTTTAGGCAGCTGTaGGAGAAGGCGGCGAGGTTG +
Preference number: 5 (lower is better)
Translates to: AAAPRGPGEAAQRHCCHPGFRQL*EKAARL
Trigger: CAACCTCGCCGCCTTCTCCAACAGCTGCCTAAACCC...AGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CAA 90 bp CTAACCCACACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGGGTCACCGCTGGCCTTaGGACCCTGCGGGGCGAGCG +
Preference number: 5 (lower is better)
Translates to: LTHTAARTVPVHMSAIAMGHRWP*DPAGRA
Trigger: CGCTCGCCCCGCAGGGTCCAAAGGCCAGCGGTGACC...CATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTGTGGGTTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CAA 90 bp CAGGCTGGTCACCGCTGGCCTTTGGACCCTGCGGGGCGAGCGCTTTGGGATTGTGGCCGCACAGCGCCATaGCTGCCATCCTGGAAGATG +
Preference number: 5 (lower is better)
Translates to: QAGHRWPLDPAGRALWDCGRTAP*LPSWKM
Trigger: CATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCC...ACAATCCCAAAGCGCTCGCCCCGCAGGGTCCAAAGGCCAGCGGTGACCAGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CAA 90 bp CTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGGCCGCACAGCGCCATaGCTGCCATCCTGGAAGATG +
Preference number: 5 (lower is better)
Translates to: LLLVGLVRPHSAIAAILEGRTAP*LPSWKM
Trigger: CATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCC...TTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS GCA 90 bp CCAGGGCCGCCTCTCCTGCTCATGGTTGCGGATTTCACAGTCTCGTaGAGGCGGAGAATAAACCTCCCTCCCCGGACTCTCGGGGCCGCT +
Preference number: 5 (lower is better)
Translates to: PGPPLLLMVADFTVS*RRRINLPPRTLGAA
Trigger: AGCGGCCCCGAGAGTCCGGGGAGGGAGGTTTATTCTCCGCCTGCACGAGACTGTGAAATCCGCAACCATGAGCAGGAGAGGCGGCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397092.5
ENST00000413368.5
CDS GCA 90 bp CTTGGAACCCGCTGCAGGAGGTGTACCTCTGCTGGACCTGCCGAATaGCTGAGCAGGGCTAGAGAGAGGAAGAGACCCGCCCTGGGAGCC +
Preference number: 5 (lower is better)
Translates to: LGTRCRRCTSAGPAE*LSRARERKRPALGA
Trigger: GGCTCCCAGGGCGGGTCTCTTCCTCTCTCTAGCCCTGCTCAGGCATTCGGCAGGTCCAGCAGAGGTACACCTCCTGCAGCGGGTTCCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397088.4
CDS CCA 90 bp GTTAACTGCAGAGAGTGGGAAGAACAGATGCTCCTCACACCGGCATaGTGCATCCGTGGAGGCGAGGGCCCTCCGCGTGCTCGTCCGGCG +
Preference number: 5 (lower is better)
Translates to: VNCREWEEQMLLTPA*CIRGGEGPPRARPA
Trigger: CGCCGGACGAGCACGCGGAGGGCCCTCGCCTCCACGGATGCACCATGCCGGTGTGAGGAGCATCTGTTCTTCCCACTCTCTGCAGTTAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5
CDS-3UTR CAA 90 bp TCAGACCGTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTGCCGTCCAGATGTaGGTGGCCTCTTCCCCACCA +
Preference number: 5 (lower is better)
Translates to: SDRGHRGHTATSSSDPPAPAVQM*VASSPP
Trigger: TGGTGGGGAAGAGGCCACCAACATCTGGACGGCAGG...TGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCACGGTCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297469.3
CDS-3UTR CAA 90 bp GCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGGGCCGCACAGCGCCATaGCTGCCATCCTGGAAGATG +
Preference number: 5 (lower is better)
Translates to: AQTHQHLASPASVPPRWQGRTAP*LPSWKM
Trigger: CATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCC...CTGCCACCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CAA 90 bp GTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCCTCTGGGTACCTGGGTaGCAGCCCCTTCTGTGCTCC +
Preference number: 5 (lower is better)
Translates to: VRPHSAIAAILEDGGRSGLWVPG*QPLLCS
Trigger: GGAGCACAGAAGGGGCTGCAACCCAGGTACCCAGAG...GCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397088.4
ENST00000397092.5
CDS GCA 90 bp ATGATGGCGAAGGGCACGATGAAGCCCAGCGTGACCTCGAGCCACTaGACCTCCCGGACATCCGCGAAACAGAAGCAGGCCTCGTCGGTG +
Preference number: 5 (lower is better)
Translates to: MMAKGTMKPSVTSSH*TSRTSAKQKQASSV
Trigger: CACCGACGAGGCCTGCTTCTGTTTCGCGGATGTCCGGGAGGTGCAGTGGCTCGAGGTCACGCTGGGCTTCATCGTGCCCTTCGCCATCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000617001.1
CDS GCA 90 bp CTCCTTGGTCAGGCCCATCAGGCTGGAGGTGCACTTGGAACCCGCTaGAGGAGGTGTACCTCTGCTGGACCTGCCGAATGCCTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: LLGQAHQAGGALGTR*RRCTSAGPAECLSR
Trigger: CCTGCTCAGGCATTCGGCAGGTCCAGCAGAGGTACACCTCCTGCAGCGGGTTCCAAGTGCACCTCCAGCCTGATGGGCCTGACCAAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397088.4
ENST00000397092.5
ENST00000413368.5
CDS CCA 90 bp CTTGTGTCCACCCAGGTGTGTGCAGCTCCCGAGTCACACCCTGGCTaGGCCTATGCGGCCAAGGCTGTCTACACGGCACTGCTGAACCTC +
Preference number: 5 (lower is better)
Translates to: LVSTQVCAAPESHPG*AYAAKAVYTALLNL
Trigger: GAGGTTCAGCAGTGCCGTGTAGACAGCCTTGGCCGCATAGGCCCAGCCAGGGTGTGACTCGGGAGCTGCACACACCTGGGTGGACACAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS CCA 90 bp GTGCCTTGTGTCCACCCAGGTGTGTGCAGCTCCCGAGTCACACCCTaGCTGGGCCTATGCGGCCAAGGCTGTCTACACGGCACTGCTGAA +
Preference number: 5 (lower is better)
Translates to: VPCVHPGVCSSRVTP*LGLCGQGCLHGTAE
Trigger: TTCAGCAGTGCCGTGTAGACAGCCTTGGCCGCATAGGCCCAGCCAGGGTGTGACTCGGGAGCTGCACACACCTGGGTGGACACAAGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS CCA 90 bp GGCTGGAGGTGCACTTGGAACCCGCTGCAGGAGGTGTACCTCTGCTaGACCTGCCGAATGCCTGAGCAGGGCTGCCGTCCAGATGTTGGT +
Preference number: 5 (lower is better)
Translates to: GWRCTWNPLQEVYLC*TCRMPEQGCRPDVG
Trigger: ACCAACATCTGGACGGCAGCCCTGCTCAGGCATTCGGCAGGTCCAGCAGAGGTACACCTCCTGCAGCGGGTTCCAAGTGCACCTCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397092.5
ENST00000413368.5
CDS-3UTR CAA 90 bp GCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTACGCTGCTGTACATGTaGACCTGCAGGAAGAGCGAC +
Preference number: 5 (lower is better)
Translates to: AAAPRGPGEAAQRHCCHPTLLYM*TCRKSD
Trigger: GTCGCTCTTCCTGCAGGTCAACATGTACAGCAGCGT...AGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CAA 90 bp CACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGGAGAAGGCGGCGAGGTaGACAATGTGGCCCGTGAGG +
Preference number: 5 (lower is better)
Translates to: HSAIAAILEDGGRSGVHQEKAAR*TMWPVR
Trigger: CCTCACGGGCCACATTGTCAACCTCGCCGCCTTCTC...CTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CAA 90 bp AGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTGGCCGCACAGCGCCATaGCTGCCATCCTGGAAGATG +
Preference number: 5 (lower is better)
Translates to: RTHRDVQLRPTSTLHLQRGRTAP*LPSWKM
Trigger: CATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCC...ACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CAA 90 bp GAACCACCCCGGAGCAGACGGCGGGCGCTCCACAGAGGGGCCTTCCTGCTGCTCTGCTGGAGTATTTCATaGTCCTGGCACCCGACTAAC +
Preference number: 5 (lower is better)
Translates to: EPPRSRRRALHRGAFLLLCWSIS*SWHPTN
Trigger: GTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCA...GAGCAGCAGGAAGGCCCCTCTGTGGAGCGCCCGCCGTCTGCTCCGGGGTGGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS GCA 90 bp TCAGGCTGGAGGTGCACTTGGAACCCGCTGCAGGAGGTGTACCTCTaGTGGACCTGCCGAATGCCTGAGCAGGGCTGCCGTCCAGATGTT +
Preference number: 5 (lower is better)
Translates to: SGWRCTWNPLQEVYL*WTCRMPEQGCRPDV
Trigger: AACATCTGGACGGCAGCCCTGCTCAGGCATTCGGCAGGTCCAGCAGAGGTACACCTCCTGCAGCGGGTTCCAAGTGCACCTCCAGCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397092.5
ENST00000413368.5
CDS GCA 90 bp GCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTGCTaGCATCCTGGAAGATGGAGGACGCTCAGAAATGTTTCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: AAAPRGPGEAAQRHC*HPGRWRTLRNVSCS
Trigger: GCTGCAGGAAACATTTCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619052.1
CDS GCA 90 bp AGCGCTGCTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTaGTGCCATCCTGGAAGATGGAGGACGCTCAGAAATGTTTCCTGC +
Preference number: 5 (lower is better)
Translates to: SAAAPRGPGEAAQRH*CHPGRWRTLRNVSC
Trigger: GCAGGAAACATTTCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAGCAGCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619052.1
CDS CCA 90 bp GGCTGCGCGGTGCCTGGGTACATCTCCAGGCCCACGCCCCGGGCTTaGGAAGTCACATCCATGTCTCTGCACCGTGCAGCTTTCAAGATT +
Preference number: 5 (lower is better)
Translates to: GCAVPGYISRPTPRA*EVTSMSLHRAAFKI
Trigger: AATCTTGAAAGCTGCACGGTGCAGAGACATGGATGTGACTTCCCAAGCCCGGGGCGTGGGCCTGGAGATGTACCCAGGCACCGCGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5
ENST00000617001.1
CDS-3UTR CAA 90 bp CATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAGCATGCCCACGCCCCGGGCTaGGGAAGTCACATCCATGTC +
Preference number: 5 (lower is better)
Translates to: HCCHPGRWRTLRRAPEQHAHAPG*GSHIHV
Trigger: GACATGGATGTGACTTCCCAAGCCCGGGGCGTGGGC...ATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CAA 90 bp TGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAGCATGTTTTCAGCGGGTGGGACAGGTaGAGCTCGGGGGAGGTGGTG +
Preference number: 5 (lower is better)
Translates to: CHPGRWRTLRRAPEQHVFSGWDR*SSGEVV
Trigger: CACCACCTCCCCCGAGCTCAACCTGTCCCACCCGCT...GAAAACATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CAA 90 bp CTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAGCATGTTTTAGCGGGTGGGACAGGTaGAGCTCGGGGGAGGTGGTG +
Preference number: 5 (lower is better)
Translates to: LPSWKMEDAQACTRAACFSGWDR*SSGEVV
Trigger: CACCACCTCCCCCGAGCTCAACCTGTCCCACCCGCT...AAAACATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CAA 90 bp CTGCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAACGCTGCTGTACATGTaGACCTGCAGGAAGAGCGAC +
Preference number: 5 (lower is better)
Translates to: LLLVGLVRPHSAIAAILETLLYM*TCRKSD
Trigger: GTCGCTCTTCCTGCAGGTCAACATGTACAGCAGCGT...TTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CAA 90 bp CTCTCCGTGTGGCTTTCCTGGTCGACGGTGTCAGAAATGTTTCCTGCAGCGGCATGGCGGAAAGACTGCTaGCAGGGAGCGGCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: LSVWLSWSTVSEMFPAAAWRKDC*QGAAPG
Trigger: GCCTGGGGCCGCTCCCTGCAAGCAGTCTTTCCGCCA...TGCCGCTGCAGGAAACATTTCTGACACCGTCGACCAGGAAAGCCACACGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CAA 90 bp CTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAGCATGTTTTTGGCGGAAAGACTGCTaGCAGGGAGCGGCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: LPSWKMEDAQACTRAACFWRKDC*QGAAPG
Trigger: GCCTGGGGCCGCTCCCTGCAAGCAGTCTTTCCGCCA...AAAACATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CAA 90 bp CACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGATGTACAGCCTCAGCTaGTCCCTGAAGGTCTCCCCG +
Preference number: 5 (lower is better)
Translates to: HSAIAAILEDGGRSGVHQMYSLS*SLKVSP
Trigger: CGGGGAGACCTTCAGGGACAAGCTGAGGCTGTACAT...CTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS GCA 90 bp TCTCCAGGCCCACGCCCCGGGCTTGGGAAGTCACATCCATGTCTCTaGACCGTGCAGCTTTCAAGATTTGCCGAAAGGCTCCCAGAGCTC +
Preference number: 5 (lower is better)
Translates to: SPGPRPGLGKSHPCL*TVQLSRFAERLPEL
Trigger: GAGCTCTGGGAGCCTTTCGGCAAATCTTGAAAGCTGCACGGTGCAGAGACATGGATGTGACTTCCCAAGCCCGGGGCGTGGGCCTGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5
ENST00000617001.1
CDS-3UTR CAA 90 bp GAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTTGCAGCTTTCAAGATTaGCCGAAAGGCTCCCAGAGC +
Preference number: 5 (lower is better)
Translates to: EAAQRHCCHPGRWRTLRRCSFQD*PKGSQS
Trigger: GCTCTGGGAGCCTTTCGGCAAATCTTGAAAGCTGCA...ACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CAA 90 bp GCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGTTGATGTCAACAAGCTGGCGGAAAGACTGCTaGCAGGGAGCGGCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: ARTVPVHMSAIAMLMSTSWRKDC*QGAAPG
Trigger: GCCTGGGGCCGCTCCCTGCAAGCAGTCTTTCCGCCA...GCTTGTTGACATCAACATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CAA 90 bp TTCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACCCATGGCGGAAAGACTGCTaGCAGGGAGCGGCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: FVSHRCWSISLSWHPTNPWRKDC*QGAAPG
Trigger: GCCTGGGGCCGCTCCCTGCAAGCAGTCTTTCCGCCA...TGGGTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CAA 90 bp CCTGGTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCTGCTGGAGTATTTCATaGTCCTGGCACCCGACTAAC +
Preference number: 5 (lower is better)
Translates to: PGEAAQRHCCHPGRWRTLCWSIS*SWHPTN
Trigger: GTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCA...GAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CAA 90 bp GTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCTGCTGGAGTATTTCATaGTCCTGGCACCCGACTAAC +
Preference number: 5 (lower is better)
Translates to: VRPHSAIAAILEDGGRSGCWSIS*SWHPTN
Trigger: GTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCA...GCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CAA 90 bp CACACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGTTGATGACCAGGATCAGGATGTaGCCCACAAAGCCGATGGGG +
Preference number: 5 (lower is better)
Translates to: HTAARTVPVHMSAIAMLMTRIRM*PTKPMG
Trigger: CCCCATCGGCTTTGTGGGCAACATCCTGATCCTGGT...CATCAACATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CAA 90 bp GCTCAGACCGTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGTCAGGGCCGGCAAATTaGTTTTCTGCTCAATGTACA +
Preference number: 5 (lower is better)
Translates to: AQTVGTEDTPRRPAQTHQSGPAN*FSAQCT
Trigger: TGTACATTGAGCAGAAAACAAATTTGCCGGCCCTGA...CTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCACGGTCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CAA 90 bp CAGGCTGGTCACCGCTGGCCTTTGGACCCTGCGGGGCGAGCGCTTTGGGATTGTTCAGGGCCGGCAAATTaGTTTTCTGCTCAATGTACA +
Preference number: 5 (lower is better)
Translates to: QAGHRWPLDPAGRALWDCSGPAN*FSAQCT
Trigger: TGTACATTGAGCAGAAAACAAATTTGCCGGCCCTGA...ACAATCCCAAAGCGCTCGCCCCGCAGGGTCCAAAGGCCAGCGGTGACCAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CAA 90 bp TCATCACCGCAGTTGTCCCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCGGTCACCGCTGGCCTTaGGACCCTGCGGGGCGAGCG +
Preference number: 5 (lower is better)
Translates to: SSPQLSPAVISVETNSSAGHRWP*DPAGRA
Trigger: CGCTCGCCCCGCAGGGTCCAAAGGCCAGCGGTGACC...GGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGGGACAACTGCGGTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CAA 90 bp CCGCGACGTCCAGCTCAGACCCACCAGCACCTTGCATCTCCAGCGTCAGTTCCCACATCATCACCGCAGTaGTCCCCAGCTGTTATTTCT +
Preference number: 5 (lower is better)
Translates to: PRRPAQTHQHLASPASVPTSSPQ*SPAVIS
Trigger: AGAAATAACAGCTGGGGACAACTGCGGTGATGATGT...GGGAACTGACGCTGGAGATGCAAGGTGCTGGTGGGTCTGAGCTGGACGTCGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS GCA 90 bp TCCCCAGGAGGAGCACCTGTGGTGGTTTGGGTTGGGTTTGTTAACTaGAGAGAGTGGGAAGAACAGATGCTCCTCACACCGGCATGGTGC +
Preference number: 5 (lower is better)
Translates to: SPGGAPVVVWVGFVN*REWEEQMLLTPAWC
Trigger: GCACCATGCCGGTGTGAGGAGCATCTGTTCTTCCCACTCTCTGCAGTTAACAAACCCAACCCAAACCACCACAGGTGCTCCTCCTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5
CDS GCA 90 bp GCCCACGCCCCGGGCTTGGGAAGTCACATCCATGTCTCTGCACCGTaGAGCTTTCAAGATTTGCCGAAAGGCTCCCAGAGCTCTGTTTTA +
Preference number: 5 (lower is better)
Translates to: AHAPGLGSHIHVSAP*SFQDLPKGSQSSVL
Trigger: TAAAACAGAGCTCTGGGAGCCTTTCGGCAAATCTTGAAAGCTGCACGGTGCAGAGACATGGATGTGACTTCCCAAGCCCGGGGCGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5
ENST00000617001.1
CDS CCA 90 bp CCAGGATCAGGATGTTGCCCACAAAGCCGATGGGGAAGAGGAAGATaGTGTAGAGGCACGAGAGGAACAGGCCGATCACGTACTGCTGGT +
Preference number: 5 (lower is better)
Translates to: PGSGCCPQSRWGRGR*CRGTRGTGRSRTAG
Trigger: ACCAGCAGTACGTGATCGGCCTGTTCCTCTCGTGCCTCTACACCATCTTCCTCTTCCCCATCGGCTTTGTGGGCAACATCCTGATCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000617001.1
CDS-3UTR CAA 90 bp CGACTAACCCACACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCTGGTTTGGGTTGGGTTaGTTAACTGCAGAGAGTGGG +
Preference number: 5 (lower is better)
Translates to: RLTHTAARTVPVHMSAIAWFGLG*LTAESG
Trigger: CCCACTCTCTGCAGTTAACAAACCCAACCCAAACCA...GGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTGTGGGTTAGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CAA 90 bp GTTGTCCCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTGCTGGAGCGGGTGGGACAGGTaGAGCTCGGGGGAGGTGGTG +
Preference number: 5 (lower is better)
Translates to: VVPSCYFCRNKFVSHRCWSGWDR*SSGEVV
Trigger: CACCACCTCCCCCGAGCTCAACCTGTCCCACCCGCT...CCAGCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGGGACAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CAA 90 bp TCAGACCGTGGGCACAGAGGACACACCGCGACGTCCAGCTCAGACCCACCAGCACACATGACAGGTTTATaGACAAAGGCTGAACGTCAC +
Preference number: 5 (lower is better)
Translates to: SDRGHRGHTATSSSDPPAHMTGL*TKAERH
Trigger: GTGACGTTCAGCCTTTGTCAATAAACCTGTCATGTG...TGCTGGTGGGTCTGAGCTGGACGTCGCGGTGTGTCCTCTGTGCCCACGGTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CAA 90 bp GTGAGGCCGCACAGCGCCATTGCTGCCATCCTGGAAGATGGAGGACGCTCAGGCCACATGACAGGTTTATaGACAAAGGCTGAACGTCAC +
Preference number: 5 (lower is better)
Translates to: VRPHSAIAAILEDGGRSGHMTGL*TKAERH
Trigger: GTGACGTTCAGCCTTTGTCAATAAACCTGTCATGTG...GCCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS CCA 90 bp GGAGCACCTGTGGTGGTTTGGGTTGGGTTTGTTAACTGCAGAGAGTaGGAAGAACAGATGCTCCTCACACCGGCATGGTGCATCCGTGGA +
Preference number: 5 (lower is better)
Translates to: GAPVVVWVGFVNCRE*EEQMLLTPAWCIRG
Trigger: TCCACGGATGCACCATGCCGGTGTGAGGAGCATCTGTTCTTCCCACTCTCTGCAGTTAACAAACCCAACCCAAACCACCACAGGTGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5
CDS-3UTR CAA 90 bp AACCCACACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGTTCTCTCCTGCTCATGGTaGCGGATTTCACAGTCTCGT +
Preference number: 5 (lower is better)
Translates to: NPHGSSHGPSPHECNCHVLSCSW*RISQSR
Trigger: ACGAGACTGTGAAATCCGCAACCATGAGCAGGAGAG...AACATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTGTGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297469.3
ENST00000397092.5
CDS-3UTR CAA 90 bp AGCACCTTGCATCTCCAGCGTCAGTTCCCCCACGGTGGCAGATTTGCTTTAGGGTGCAGCTTTCAAGATTaGCCGAAAGGCTCCCAGAGC +
Preference number: 5 (lower is better)
Translates to: STLHLQRQFPHGGRFALGCSFQD*PKGSQS
Trigger: GCTCTGGGAGCCTTTCGGCAAATCTTGAAAGCTGCA...CCCTAAAGCAAATCTGCCACCGTGGGGGAACTGACGCTGGAGATGCAAGGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CAA 90 bp TTCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACCCAATGTACAGCCTCAGCTaGTCCCTGAAGGTCTCCCCG +
Preference number: 5 (lower is better)
Translates to: FVSHRCWSISLSWHPTNPMYSLS*SLKVSP
Trigger: CGGGGAGACCTTCAGGGACAAGCTGAGGCTGTACAT...TGGGTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CAA 90 bp AAATTCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACCTCTGGGTACCTGGGTaGCAGCCCCTTCTGTGCTCC +
Preference number: 5 (lower is better)
Translates to: KFVSHRCWSISLSWHPTNLWVPG*QPLLCS
Trigger: GGAGCACAGAAGGGGCTGCAACCCAGGTACCCAGAG...GTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CAA 90 bp GCAGTTGTCCCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTGCGAGAAGGCGGCGAGGTaGACAATGTGGCCCGTGAGG +
Preference number: 5 (lower is better)
Translates to: AVVPSCYFCRNKFVSHRCEKAAR*TMWPVR
Trigger: CCTCACGGGCCACATTGTCAACCTCGCCGCCTTCTC...GCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGGGACAACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CAA 90 bp AACCCACACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGTTTGCTGGAGTATTTCATaGTCCTGGCACCCGACTAAC +
Preference number: 5 (lower is better)
Translates to: NPHGSSHGPSPHECNCHVCWSIS*SWHPTN
Trigger: GTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCA...AACATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTGTGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CAA 90 bp GCCTCTCCGTGTGGCTTTCCTGGTCGACGGTGTCAGAAATGTTTCCTGCAGCGGACATCATCACCGCAGTaGTCCCCAGCTGTTATTTCT +
Preference number: 5 (lower is better)
Translates to: ASPCGFPGRRCQKCFLQRTSSPQ*SPAVIS
Trigger: AGAAATAACAGCTGGGGACAACTGCGGTGATGATGT...CCGCTGCAGGAAACATTTCTGACACCGTCGACCAGGAAAGCCACACGGAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS CCA 90 bp AGCCTGGCATTTGTCAGACAGGAAACTCCCCAGGAGGAGCACCTGTaGTGGTTTGGGTTGGGTTTGTTAACTGCAGAGAGTGGGAAGAAC +
Preference number: 5 (lower is better)
Translates to: SLAFVRQETPQEEHL*WFGLGLLTAESGKN
Trigger: GTTCTTCCCACTCTCTGCAGTTAACAAACCCAACCCAAACCACCACAGGTGCTCCTCCTGGGGAGTTTCCTGTCTGACAAATGCCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5
CDS-3UTR CAA 90 bp CTAACCCACACGGCAGCTCGCACGGTCCCAGTCCACATGAGTGCAATTGCCATGAGTGCAATTGCCATGTaGATGTCAACAAGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: LTHTAARTVPVHMSAIAMSAIAM*MSTSSD
Trigger: GTCACTGCTTGTTGACATCAACATGGCAATTGCACT...CATGGCAATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTGTGGGTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CAA 90 bp GCTTCACCCACAGTGGCCTCTCCGTGTGGCTTTCCTGGTCGACGGTGTCAGAAAAGTGCAATTGCCATGTaGATGTCAACAAGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: ASPTVASPCGFPGRRCQKSAIAM*MSTSSD
Trigger: GTCACTGCTTGTTGACATCAACATGGCAATTGCACT...TTTCTGACACCGTCGACCAGGAAAGCCACACGGAGAGGCCACTGTGGGTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CAA 90 bp CTGCCATCCTGGAAGATGGAGGACGCTCAGGCGTGCACCAGAGCAGCATGTTTTACATCATCACCGCAGTaGTCCCCAGCTGTTATTTCT +
Preference number: 5 (lower is better)
Translates to: LPSWKMEDAQACTRAACFTSSPQ*SPAVIS
Trigger: AGAAATAACAGCTGGGGACAACTGCGGTGATGATGT...AAAACATGCTGCTCTGGTGCACGCCTGAGCGTCCTCCATCTTCCAGGATGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CAA 90 bp GCCTCTCCGTGTGGCTTTCCTGGTCGACGGTGTCAGAAATGTTTCCTGCAGCGGCACATGACAGGTTTATaGACAAAGGCTGAACGTCAC +
Preference number: 5 (lower is better)
Translates to: ASPCGFPGRRCQKCFLQRHMTGL*TKAERH
Trigger: GTGACGTTCAGCCTTTGTCAATAAACCTGTCATGTG...CCGCTGCAGGAAACATTTCTGACACCGTCGACCAGGAAAGCCACACGGAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS CCA 90 bp CTGGCATTTGTCAGACAGGAAACTCCCCAGGAGGAGCACCTGTGGTaGTTTGGGTTGGGTTTGTTAACTGCAGAGAGTGGGAAGAACAGA +
Preference number: 5 (lower is better)
Translates to: LAFVRQETPQEEHLW*FGLGLLTAESGKNR
Trigger: TCTGTTCTTCCCACTCTCTGCAGTTAACAAACCCAACCCAAACCACCACAGGTGCTCCTCCTGGGGAGTTTCCTGTCTGACAAATGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5
CDS-3UTR CAA 90 bp GCAGTTGTCCCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTGCACCAGGATCAGGATGTaGCCCACAAAGCCGATGGGG +
Preference number: 5 (lower is better)
Translates to: AVVPSCYFCRNKFVSHRCTRIRM*PTKPMG
Trigger: CCCCATCGGCTTTGTGGGCAACATCCTGATCCTGGT...GCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGGGACAACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CAA 90 bp GTTGTCCCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTGCTGGATGTACAGCCTCAGCTaGTCCCTGAAGGTCTCCCCG +
Preference number: 5 (lower is better)
Translates to: VVPSCYFCRNKFVSHRCWMYSLS*SLKVSP
Trigger: CGGGGAGACCTTCAGGGACAAGCTGAGGCTGTACAT...CCAGCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGGGACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CAA 90 bp CCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCACAGGTGCTGGAGTATTAGGCTGGAGGTGCACTaGGAACCCGCTGCAGGAGGT +
Preference number: 5 (lower is better)
Translates to: PSCYFCRNKFVSHRCWSIRLEVH*EPAAGG
Trigger: ACCTCCTGCAGCGGGTTCCAAGTGCACCTCCAGCCT...AATACTCCAGCACCTGTGGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397088.4
ENST00000397092.5
CDS CCA 90 bp ATTTGTCAGACAGGAAACTCCCCAGGAGGAGCACCTGTGGTGGTTTaGGTTGGGTTTGTTAACTGCAGAGAGTGGGAAGAACAGATGCTC +
Preference number: 5 (lower is better)
Translates to: ICQTGNSPGGAPVVV*VGFVNCREWEEQML
Trigger: GAGCATCTGTTCTTCCCACTCTCTGCAGTTAACAAACCCAACCCAAACCACCACAGGTGCTCCTCCTGGGGAGTTTCCTGTCTGACAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5
CDS-3UTR CAA 90 bp AAATTCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACCCCCCTACTGGCCATTaGAATTTTCACTCGCCGCTT +
Preference number: 5 (lower is better)
Translates to: KFVSHRCWSISLSWHPTNPPTGH*NFHSPL
Trigger: AAGCGGCGAGTGAAAATTCAAATGGCCAGTAGGGGG...GTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGAATTT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297469.3
ENST00000397092.5
CDS-3UTR CAA 90 bp GGGAAGGTTTTTACATCATCACCGCAGTTGTCCCCAGCTGTTATTTCTGTAGAAGGGTTTAGGCAGCTGTaGGAGAAGGCGGCGAGGTTG +
Preference number: 5 (lower is better)
Translates to: GKVFTSSPQLSPAVISVEGFRQL*EKAARL
Trigger: CAACCTCGCCGCCTTCTCCAACAGCTGCCTAAACCC...TTCTACAGAAATAACAGCTGGGGACAACTGCGGTGATGATGTAAAAACCTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CAA 90 bp TTCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACCCAAGTGCAATTGCCATGTaGATGTCAACAAGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: FVSHRCWSISLSWHPTNPSAIAM*MSTSSD
Trigger: GTCACTGCTTGTTGACATCAACATGGCAATTGCACT...TGGGTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CAA 90 bp AAATTCGTCAGCCACAGGTGCTGGAGTATTTCATTGTCCTGGCACCCGACTAACACATCATCACCGCAGTaGTCCCCAGCTGTTATTTCT +
Preference number: 5 (lower is better)
Translates to: KFVSHRCWSISLSWHPTNTSSPQ*SPAVIS
Trigger: AGAAATAACAGCTGGGGACAACTGCGGTGATGATGT...GTTAGTCGGGTGCCAGGACAATGAAATACTCCAGCACCTGTGGCTGACGAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CAA 90 bp AAGGCTGAACGTCACCAGCCTCATCAGCTTTTCTTACATTTTATGGGAAGGTTTCTCTCCTGCTCATGGTaGCGGATTTCACAGTCTCGT +
Preference number: 5 (lower is better)
Translates to: KAERHQPHQLFLHFMGRFLSCSW*RISQSR
Trigger: ACGAGACTGTGAAATCCGCAACCATGAGCAGGAGAG...AAACCTTCCCATAAAATGTAAGAAAAGCTGATGAGGCTGGTGACGTTCAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297469.3
ENST00000397092.5
CDS-3UTR CAA 90 bp AAGGCTGAACGTCACCAGCCTCATCAGCTTTTCTTACATTTTATGGGAAGGTTTTGCAGCTTTCAAGATTaGCCGAAAGGCTCCCAGAGC +
Preference number: 5 (lower is better)
Translates to: KAERHQPHQLFLHFMGRFCSFQD*PKGSQS
Trigger: GCTCTGGGAGCCTTTCGGCAAATCTTGAAAGCTGCA...AAACCTTCCCATAAAATGTAAGAAAAGCTGATGAGGCTGGTGACGTTCAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS-3UTR CAA 90 bp AAGGCTGAACGTCACCAGCCTCATCAGCTTTTCTTACATTTTATGGGAAGGTTTTGGTTTGGGTTGGGTTaGTTAACTGCAGAGAGTGGG +
Preference number: 5 (lower is better)
Translates to: KAERHQPHQLFLHFMGRFWFGLG*LTAESG
Trigger: CCCACTCTCTGCAGTTAACAAACCCAACCCAAACCA...AAACCTTCCCATAAAATGTAAGAAAAGCTGATGAGGCTGGTGACGTTCAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS-3UTR CAA 90 bp TCATCACCGCAGTTGTCCCCAGCTGTTATTTCTGTAGAAACAAATTCGTCAGCCTCAGGGCCGGCAAATTaGTTTTCTGCTCAATGTACA +
Preference number: 5 (lower is better)
Translates to: SSPQLSPAVISVETNSSASGPAN*FSAQCT
Trigger: TGTACATTGAGCAGAAAACAAATTTGCCGGCCCTGA...GGCTGACGAATTTGTTTCTACAGAAATAACAGCTGGGGACAACTGCGGTGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS TCA 90 bp GTTTTAAATGGTGAATCCATCTTTAGAAAGAAGCGTGATTCTCCTTaGAGTGAGCCTGGCATTTGTCAGACAGGAAACTCCCCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: VLNGESIFRKKRDSP*SEPGICQTGNSPGG
Trigger: TCCTCCTGGGGAGTTTCCTGTCTGACAAATGCCAGGCTCACTTCAAGGAGAATCACGCTTCTTTCTAAAGATGGATTCACCATTTAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5
CDS-3UTR CAA 90 bp TTATGGGAAGGTTTTTACATCATCACCGCAGTTGTCCCCAGCTGTTATTTCTGTCACATGACAGGTTTATaGACAAAGGCTGAACGTCAC +
Preference number: 5 (lower is better)
Translates to: LWEGFYIITAVVPSCYFCHMTGL*TKAERH
Trigger: GTGACGTTCAGCCTTTGTCAATAAACCTGTCATGTG...ACAGAAATAACAGCTGGGGACAACTGCGGTGATGATGTAAAAACCTTCCCATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000617001.1
CDS GCA 72 bp CGAGGGCCCTCCGCGTGCTCGTCCGGCGGGCGTCCCTaGGGGTGTCGGCCACCGTGCACAGTCCCGCGTGGA +
Preference number: 6 (lower is better)
Translates to: RGPSACSSGGRP*GCRPPCTVPRG
Trigger: TCCACGCGGGACTGTGCACGGTGGCCGACACCCGCAGGGACGCCCGCCGGACGAGCACGCGGAGGGCCCTCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5
CDS GCA 72 bp GGCATGGTGCATCCGTGGAGGCGAGGGCCCTCCGCGTaGTCGTCCGGCGGGCGTCCCTGCGGGTGTCGGCCA +
Preference number: 6 (lower is better)
Translates to: GMVHPWRRGPSA*SSGGRPCGCRP
Trigger: TGGCCGACACCCGCAGGGACGCCCGCCGGACGAGCACGCGGAGGGCCCTCGCCTCCACGGATGCACCATGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5
CDS GCA 72 bp CGGAGCGCCTTCTGCCGCCGGGGCCGCAGCCCACGGTaGCGGTGCGCCCTGACCAGCACCCGGACAATGAGG +
Preference number: 6 (lower is better)
Translates to: RSAFCRRGRSPR*RCALTSTRTMR
Trigger: CCTCATTGTCCGGGTGCTGGTCAGGGCGCACCGGCACCGTGGGCTGCGGCCCCGGCGGCAGAAGGCGCTCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000617001.1
CDS GCA 72 bp ACCAGCACCACCGCGAGGATCATGCGGAGCGCCTTCTaGCGCCGGGGCCGCAGCCCACGGTGCCGGTGCGCC +
Preference number: 6 (lower is better)
Translates to: TSTTARIMRSAF*RRGRSPRCRCA
Trigger: GGCGCACCGGCACCGTGGGCTGCGGCCCCGGCGGCAGAAGGCGCTCCGCATGATCCTCGCGGTGGTGCTGGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000617001.1
CDS GCA 72 bp TCGTCCGGCGGGCGTCCCTGCGGGTGTCGGCCACCGTaGACAGTCCCGCGTGGAGCTGCTCACTCTCTGGGT +
Preference number: 6 (lower is better)
Translates to: SSGGRPCGCRPP*TVPRGAAHSLG
Trigger: ACCCAGAGAGTGAGCAGCTCCACGCGGGACTGTGCACGGTGGCCGACACCCGCAGGGACGCCCGCCGGACGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5
CDS GCA 72 bp TTGAGCTCGGGGGAGGTGGTGTTGGGGGCCGCAGGCTaGGCGGTGCCTGGGTACATCTCCAGGCCCACGCCC +
Preference number: 6 (lower is better)
Translates to: LSSGEVVLGAAG*AVPGYISRPTP
Trigger: GGGCGTGGGCCTGGAGATGTACCCAGGCACCGCGCAGCCTGCGGCCCCCAACACCACCTCCCCCGAGCTCAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5
ENST00000617001.1
CDS CAA 72 bp TGGCCCGTGAGGGGGTGGGCATGGCGGAAAGACTGCTaGCAGGGAGCGGCCCCAGGCTGCGTCCGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: WPVRGWAWRKDC*QGAAPGCVRCR
Trigger: CCTGCAGCGGACGCAGCCTGGGGCCGCTCCCTGCAAGCAGTCTTTCCGCCATGCCCACCCCCTCACGGGCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
CDS CAA 72 bp CCGTGCGTGAGGGGGTGGGCATGGCGGAAAGACTGCTaGCAGGGAGCGGCCCCAGGCTGCGTCCGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: PCVRGWAWRKDC*QGAAPGCVRCR
Trigger: CCTGCAGCGGACGCAGCCTGGGGCCGCTCCCTGCAAGCAGTCTTTCCGCCATGCCCACCCCCTCACGCACGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617001.1
CDS GCA 72 bp AGCTCAGCCGGGCGTGGTGCTTGGTGCGGAACAGGCTaGAGCGCATGGCCCTGGCCAGGGCGATGTAGCGGT +
Preference number: 6 (lower is better)
Translates to: SSAGRGAWCGTG*SAWPWPGRCSG
Trigger: ACCGCTACATCGCCCTGGCCAGGGCCATGCGCTGCAGCCTGTTCCGCACCAAGCACCACGCCCGGCTGAGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000617001.1
CDS GCA 72 bp AGCAGACGAAGAAGACCAGCACCACCGCGAGGATCATaGGGAGCGCCTTCTGCCGCCGGGGCCGCAGCCCAC +
Preference number: 6 (lower is better)
Translates to: SRRRRPAPPRGS*GAPSAAGAAAH
Trigger: GTGGGCTGCGGCCCCGGCGGCAGAAGGCGCTCCGCATGATCCTCGCGGTGGTGCTGGTCTTCTTCGTCTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000617001.1
CDS GCA 72 bp CGGGTGTCGGCCACCGTGCACAGTCCCGCGTGGAGCTaGTCACTCTCTGGGTACCGTGAGGGGACGTCCACC +
Preference number: 6 (lower is better)
Translates to: RVSATVHSPAWS*SLSGYREGTST
Trigger: GGTGGACGTCCCCTCACGGTACCCAGAGAGTGAGCAGCTCCACGCGGGACTGTGCACGGTGGCCGACACCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401670.1
CDS CCA 72 bp AGAACAGATGCTCCTCACACCGGCATGGTGCATCCGTaGAGGCGAGGGCCCTCCGCGTGCTCGTCCGGCGGG +
Preference number: 6 (lower is better)
Translates to: RTDAPHTGMVHP*RRGPSACSSGG
Trigger: CCCGCCGGACGAGCACGCGGAGGGCCCTCGCCTCCACGGATGCACCATGCCGGTGTGAGGAGCATCTGTTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5
CDS CCA 72 bp TCCCTGCGGGTGTCGGCCACCGTGCACAGTCCCGCGTaGAGCTGCTCACTCTCTGGGTACCGTGAGGGGACG +
Preference number: 6 (lower is better)
Translates to: SLRVSATVHSPA*SCSLSGYREGT
Trigger: CGTCCCCTCACGGTACCCAGAGAGTGAGCAGCTCCACGCGGGACTGTGCACGGTGGCCGACACCCGCAGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401670.1
CDS TCA 72 bp AGCAGGCCTCGTCGGTGTGCTGCAGGTGCACGGCGGTaGAGGGCACCAGCGTGGCTGACACGGATGCCATCC +
Preference number: 6 (lower is better)
Translates to: SRPRRCAAGARR*RAPAWLTRMPS
Trigger: GGATGGCATCCGTGTCAGCCACGCTGGTGCCCTTCACCGCCGTGCACCTGCAGCACACCGACGAGGCCTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000617001.1
CDS GCA 72 bp GACTGCTTGCAGGGAGCGGCCCCAGGCTGCGTCCGCTaGAGGAGGTGCACGCTGATGAAGACGTTCTCCGGC +
Preference number: 6 (lower is better)
Translates to: DCLQGAAPGCVR*RRCTLMKTFSG
Trigger: GCCGGAGAACGTCTTCATCAGCGTGCACCTCCTGCAGCGGACGCAGCCTGGGGCCGCTCCCTGCAAGCAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000617001.1
CDS GCA 72 bp CGGGTGTCGGCCACCGTGCACAGTCCCGCGTGGAGCTaGTCACTCTCTGGGTACCTGGGTTGCAGCCCCTTC +
Preference number: 6 (lower is better)
Translates to: RVSATVHSPAWS*SLSGYLGCSPF
Trigger: GAAGGGGCTGCAACCCAGGTACCCAGAGAGTGAGCAGCTCCACGCGGGACTGTGCACGGTGGCCGACACCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397088.4
ENST00000397092.5
ENST00000413368.5
CDS CCA 72 bp CGTACTGCTGGTGCTCCGAGAGCTCACCTGTCCCATTaGCCAGGGCGGTGCCCAGGAGCGGGTGGGACAGGT +
Preference number: 6 (lower is better)
Translates to: RTAGAPRAHLSH*PGRCPGAGGTG
Trigger: ACCTGTCCCACCCGCTCCTGGGCACCGCCCTGGCCAATGGGACAGGTGAGCTCTCGGAGCACCAGCAGTACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5
ENST00000617001.1
CDS CCA 72 bp TCCCTGCGGGTGTCGGCCACCGTGCACAGTCCCGCGTaGAGCTGCTCACTCTCTGGGTACCTGGGTTGCAGC +
Preference number: 6 (lower is better)
Translates to: SLRVSATVHSPA*SCSLSGYLGCS
Trigger: GCTGCAACCCAGGTACCCAGAGAGTGAGCAGCTCCACGCGGGACTGTGCACGGTGGCCGACACCCGCAGGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397088.4
ENST00000397092.5
ENST00000413368.5
CDS TCA 72 bp AGGGCACCAGCGTGGCTGACACGGATGCCATCCAGATaGGGCCACAGCTCAGCCGGGCGTGGTGCTTGGTGC +
Preference number: 6 (lower is better)
Translates to: RAPAWLTRMPSR*GHSSAGRGAWC
Trigger: GCACCAAGCACCACGCCCGGCTGAGCTGTGGCCTCATCTGGATGGCATCCGTGTCAGCCACGCTGGTGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000617001.1
CDS GCA 72 bp CGGGTGTCGGCCACCGTGCACAGTCCCGCGTGGAGCTaGTCACTCTCTGGGTACCTGCCGTCCAGATGTTGG +
Preference number: 6 (lower is better)
Translates to: RVSATVHSPAWS*SLSGYLPSRCW
Trigger: CCAACATCTGGACGGCAGGTACCCAGAGAGTGAGCAGCTCCACGCGGGACTGTGCACGGTGGCCGACACCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297469.3
CDS GCA 72 bp GCGAAACAGAAGCAGGCCTCGTCGGTGTGCTGCAGGTaGACGGCGGTGAAGGGCACCAGCGTGGCTGACACG +
Preference number: 6 (lower is better)
Translates to: AKQKQASSVCCR*TAVKGTSVADT
Trigger: CGTGTCAGCCACGCTGGTGCCCTTCACCGCCGTGCACCTGCAGCACACCGACGAGGCCTGCTTCTGTTTCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000617001.1
CDS CCA 72 bp GATGCCATCCAGATGAGGCCACAGCTCAGCCGGGCGTaGTGCTTGGTGCGGAACAGGCTGCAGCGCATGGCC +
Preference number: 6 (lower is better)
Translates to: DAIQMRPQLSRA*CLVRNRLQRMA
Trigger: GGCCATGCGCTGCAGCCTGTTCCGCACCAAGCACCACGCCCGGCTGAGCTGTGGCCTCATCTGGATGGCATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000617001.1
CDS CCA 72 bp AAGGCGGCGAGGTTGACAATGTGGCCCGTGAGGGGGTaGGCATGGCGGAAAGACTGCTTGCAGGGAGCGGCC +
Preference number: 6 (lower is better)
Translates to: KAARLTMWPVRG*AWRKDCLQGAA
Trigger: GGCCGCTCCCTGCAAGCAGTCTTTCCGCCATGCCCACCCCCTCACGGGCCACATTGTCAACCTCGCCGCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
CDS CCA 72 bp GTCCACCCAGGTGTGTGCAGCTCCCGAGTCACACCCTaGCTGGGCCTATGCGGCCAAGGCTGTCTACACGGC +
Preference number: 6 (lower is better)
Translates to: VHPGVCSSRVTP*LGLCGQGCLHG
Trigger: GCCGTGTAGACAGCCTTGGCCGCATAGGCCCAGCCAGGGTGTGACTCGGGAGCTGCACACACCTGGGTGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
CDS GCA 72 bp GAGTGGGAAGAACAGATGCTCCTCACACCGGCATGGTaGATCCGTGGAGGCGAGGGCCCTCCGCGTGCTCGT +
Preference number: 6 (lower is better)
Translates to: EWEEQMLLTPAW*IRGGEGPPRAR
Trigger: ACGAGCACGCGGAGGGCCCTCGCCTCCACGGATGCACCATGCCGGTGTGAGGAGCATCTGTTCTTCCCACTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5
CDS GCA 72 bp CGCTGCAGGAGGTGTACCTCTGCTGGACCTGCCGAATaGCTGAGCAGGGCTGCCGTCCAGATGTTGGTGGCC +
Preference number: 6 (lower is better)
Translates to: RCRRCTSAGPAE*LSRAAVQMLVA
Trigger: GGCCACCAACATCTGGACGGCAGCCCTGCTCAGGCATTCGGCAGGTCCAGCAGAGGTACACCTCCTGCAGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397092.5
ENST00000413368.5
CDS CAA 72 bp GGTGCCTGGGTACATCTCCAGGCCCACGCCCCGGGCTaGGGAAGTCACATCCATGTCTCTGCACCGTGCAGC +
Preference number: 6 (lower is better)
Translates to: GAWVHLQAHAPG*GSHIHVSAPCS
Trigger: GCTGCACGGTGCAGAGACATGGATGTGACTTCCCAAGCCCGGGGCGTGGGCCTGGAGATGTACCCAGGCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5
ENST00000617001.1
CDS GCA 72 bp AGGCACGAGAGGAACAGGCCGATCACGTACTGCTGGTaGTCCGAGAGCTCACCTGTCCCATTGGCCAGGGCG +
Preference number: 6 (lower is better)
Translates to: RHERNRPITYCW*SESSPVPLARA
Trigger: CGCCCTGGCCAATGGGACAGGTGAGCTCTCGGAGCACCAGCAGTACGTGATCGGCCTGTTCCTCTCGTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5
ENST00000617001.1
CDS GCA 72 bp AAGGGCACGATGAAGCCCAGCGTGACCTCGAGCCACTaGACCTCCCGGACATCCGCGAAACAGAAGCAGGCC +
Preference number: 6 (lower is better)
Translates to: KGTMKPSVTSSH*TSRTSAKQKQA
Trigger: GGCCTGCTTCTGTTTCGCGGATGTCCGGGAGGTGCAGTGGCTCGAGGTCACGCTGGGCTTCATCGTGCCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000617001.1
CDS GCA 72 bp CAGGCCCATCAGGCTGGAGGTGCACTTGGAACCCGCTaGAGGAGGTGTACCTCTGCTGGACCTGCCGAATGC +
Preference number: 6 (lower is better)
Translates to: QAHQAGGALGTR*RRCTSAGPAEC
Trigger: GCATTCGGCAGGTCCAGCAGAGGTACACCTCCTGCAGCGGGTTCCAAGTGCACCTCCAGCCTGATGGGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397088.4
ENST00000397092.5
ENST00000413368.5
CDS GCA 72 bp AGGTGCACTTGGAACCCGCTGCAGGAGGTGTACCTCTaGTGGACCTGCCGAATGCCTGAGCAGGGCTGCCGT +
Preference number: 6 (lower is better)
Translates to: RCTWNPLQEVYL*WTCRMPEQGCR
Trigger: ACGGCAGCCCTGCTCAGGCATTCGGCAGGTCCAGCAGAGGTACACCTCCTGCAGCGGGTTCCAAGTGCACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397092.5
ENST00000413368.5
CDS CCA 72 bp AGAGAGTGGGAAGAACAGATGCTCCTCACACCGGCATaGTGCATCCGTGGAGGCGAGGGCCCTCCGCGTGCT +
Preference number: 6 (lower is better)
Translates to: REWEEQMLLTPA*CIRGGEGPPRA
Trigger: AGCACGCGGAGGGCCCTCGCCTCCACGGATGCACCATGCCGGTGTGAGGAGCATCTGTTCTTCCCACTCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5
CDS CCA 72 bp GTGCCTGGGTACATCTCCAGGCCCACGCCCCGGGCTTaGGAAGTCACATCCATGTCTCTGCACCGTGCAGCT +
Preference number: 6 (lower is better)
Translates to: VPGYISRPTPRA*EVTSMSLHRAA
Trigger: AGCTGCACGGTGCAGAGACATGGATGTGACTTCCCAAGCCCGGGGCGTGGGCCTGGAGATGTACCCAGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5
ENST00000617001.1
CDS CCA 72 bp AGGCAGCTGTTGGAGAAGGCGGCGAGGTTGACAATGTaGCCCGTGAGGGGGTGGGCATGGCGGAAAGACTGC +
Preference number: 6 (lower is better)
Translates to: RQLLEKAARLTM*PVRGWAWRKDC
Trigger: GCAGTCTTTCCGCCATGCCCACCCCCTCACGGGCCACATTGTCAACCTCGCCGCCTTCTCCAACAGCTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
CDS CAA 90 bp AGGCTGCGCGGTGCCTGGGTACATCTCCAGGCCCACGCCCCGGGCTaGGGAAGTCACATCCATGTCTCTGCACCGTGCAGCTTTCAAGAT +
Preference number: 6 (lower is better)
Translates to: RLRGAWVHLQAHAPG*GSHIHVSAPCSFQD
Trigger: ATCTTGAAAGCTGCACGGTGCAGAGACATGGATGTGACTTCCCAAGCCCGGGGCGTGGGCCTGGAGATGTACCCAGGCACCGCGCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5
ENST00000617001.1
CDS GCA 72 bp TGTTGGTGGCCTCTTCCCCACCAGGGCCGCCTCTCCTaGTCATGGTTGCGGATTTCACAGTCTCGTGCAGGC +
Preference number: 6 (lower is better)
Translates to: CWWPLPHQGRLS*SWLRISQSRAG
Trigger: GCCTGCACGAGACTGTGAAATCCGCAACCATGAGCAGGAGAGGCGGCCCTGGTGGGGAAGAGGCCACCAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397092.5
ENST00000413368.5
CDS GCA 72 bp GCTCCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTaGTGCCATCCTGGAAGATGGAGGACGCTCAGAAAT +
Preference number: 6 (lower is better)
Translates to: APRGPGEAAQRH*CHPGRWRTLRN
Trigger: ATTTCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619052.1
CDS TCA 72 bp GGGCCTATGCGGCCAAGGCTGTCTACACGGCACTGCTaGACCTCACATCCGACTGCTCGGTGCTGTCTGGAA +
Preference number: 6 (lower is better)
Translates to: GPMRPRLSTRHC*TSHPTARCCLE
Trigger: TTCCAGACAGCACCGAGCAGTCGGATGTGAGGTTCAGCAGTGCCGTGTAGACAGCCTTGGCCGCATAGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
CDS GCA 72 bp CCTCGTGGGCCTGGTGAGGCCGCACAGCGCCATTGCTaGCATCCTGGAAGATGGAGGACGCTCAGAAATGTT +
Preference number: 6 (lower is better)
Translates to: PRGPGEAAQRHC*HPGRWRTLRNV
Trigger: AACATTTCTGAGCGTCCTCCATCTTCCAGGATGGCAGCAATGGCGCTGTGCGGCCTCACCAGGCCCACGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619052.1
CDS GCA 72 bp GCTGTCTACACGGCACTGCTGAACCTCACATCCGACTaGTCGGTGCTGTCTGGAATGACGGCCTTCAGGGCA +
Preference number: 6 (lower is better)
Translates to: AVYTALLNLTSD*SVLSGMTAFRA
Trigger: TGCCCTGAAGGCCGTCATTCCAGACAGCACCGAGCAGTCGGATGTGAGGTTCAGCAGTGCCGTGTAGACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
CDS CCA 72 bp ACTGCTGAACCTCACATCCGACTGCTCGGTGCTGTCTaGAATGACGGCCTTCAGGGCAGCGTGACAGAAGCG +
Preference number: 6 (lower is better)
Translates to: TAEPHIRLLGAV*NDGLQGSVTEA
Trigger: CGCTTCTGTCACGCTGCCCTGAAGGCCGTCATTCCAGACAGCACCGAGCAGTCGGATGTGAGGTTCAGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
CDS GCA 72 bp CCTCTCCTGCTCATGGTTGCGGATTTCACAGTCTCGTaGAGGCGGAGAATAAACCTCCCTCCCCGGACTCTC +
Preference number: 6 (lower is better)
Translates to: PLLLMVADFTVS*RRRINLPPRTL
Trigger: GAGAGTCCGGGGAGGGAGGTTTATTCTCCGCCTGCACGAGACTGTGAAATCCGCAACCATGAGCAGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297469.3
ENST00000397092.5
ENST00000413368.5
CDS GCA 72 bp CCACGCCCCGGGCTTGGGAAGTCACATCCATGTCTCTaGACCGTGCAGCTTTCAAGATTTGCCGAAAGGCTC +
Preference number: 6 (lower is better)
Translates to: PRPGLGKSHPCL*TVQLSRFAERL
Trigger: GAGCCTTTCGGCAAATCTTGAAAGCTGCACGGTGCAGAGACATGGATGTGACTTCCCAAGCCCGGGGCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5
ENST00000617001.1
CDS GCA 72 bp CCGGGCTTGGGAAGTCACATCCATGTCTCTGCACCGTaGAGCTTTCAAGATTTGCCGAAAGGCTCCCAGAGC +
Preference number: 6 (lower is better)
Translates to: PGLGSHIHVSAP*SFQDLPKGSQS
Trigger: GCTCTGGGAGCCTTTCGGCAAATCTTGAAAGCTGCACGGTGCAGAGACATGGATGTGACTTCCCAAGCCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5
ENST00000617001.1
CDS CAA 90 bp CAGGAAACTCCCCAGGAGGAGCACCTGTGGTGGTTTGGGTTGGGTTaGTTAACTGCAGAGAGTGGGAAGAACAGATGCTCCTCACACCGG +
Preference number: 6 (lower is better)
Translates to: QETPQEEHLWWFGLG*LTAESGKNRCSSHR
Trigger: CCGGTGTGAGGAGCATCTGTTCTTCCCACTCTCTGCAGTTAACAAACCCAACCCAAACCACCACAGGTGCTCCTCCTGGGGAGTTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5
CDS CCA 72 bp GTCAGACAGGAAACTCCCCAGGAGGAGCACCTGTGGTaGTTTGGGTTGGGTTTGTTAACTGCAGAGAGTGGG +
Preference number: 6 (lower is better)
Translates to: VRQETPQEEHLW*FGLGLLTAESG
Trigger: CCCACTCTCTGCAGTTAACAAACCCAACCCAAACCACCACAGGTGCTCCTCCTGGGGAGTTTCCTGTCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5
CDS CAA 72 bp CCCCAGGAGGAGCACCTGTGGTGGTTTGGGTTGGGTTaGTTAACTGCAGAGAGTGGGAAGAACAGATGCTCC +
Preference number: 6 (lower is better)
Translates to: PQEEHLWWFGLG*LTAESGKNRCS
Trigger: GGAGCATCTGTTCTTCCCACTCTCTGCAGTTAACAAACCCAACCCAAACCACCACAGGTGCTCCTCCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5
CDS CAA 72 bp TCGCGGAAGCTGATGTTCACCACCAGGATCAGGATGTaGCCCACAAAGCCGATGGGGAAGAGGAAGATGGTG +
Preference number: 6 (lower is better)
Translates to: SRKLMFTTRIRM*PTKPMGKRKMV
Trigger: CACCATCTTCCTCTTCCCCATCGGCTTTGTGGGCAACATCCTGATCCTGGTGGTGAACATCAGCTTCCGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000617001.1
CDS CAA 72 bp GGGCAGCGTGACAGAAGCGGTTCAGGGCCGGCAAATTaGTTTTCTGCTCAATGTACAGCCTCAGCTTGTCCC +
Preference number: 6 (lower is better)
Translates to: GQRDRSGSGPAN*FSAQCTASACP
Trigger: GGGACAAGCTGAGGCTGTACATTGAGCAGAAAACAAATTTGCCGGCCCTGAACCGCTTCTGTCACGCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
CDS TCA 72 bp AGTACAGGTCGGGGATGGTCATCTTCTCGCGGAAGCTaGTGTTCACCACCAGGATCAGGATGTTGCCCACAA +
Preference number: 6 (lower is better)
Translates to: STGRGWSSSRGS*CSPPGSGCCPQ
Trigger: TTGTGGGCAACATCCTGATCCTGGTGGTGAACATCAGCTTCCGCGAGAAGATGACCATCCCCGACCTGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000617001.1
CDS CCA 72 bp ACAGGAAACTCCCCAGGAGGAGCACCTGTGGTGGTTTaGGTTGGGTTTGTTAACTGCAGAGAGTGGGAAGAA +
Preference number: 6 (lower is better)
Translates to: TGNSPGGAPVVV*VGFVNCREWEE
Trigger: TTCTTCCCACTCTCTGCAGTTAACAAACCCAACCCAAACCACCACAGGTGCTCCTCCTGGGGAGTTTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5
CDS CAA 72 bp CACATCCATGTCTCTGCACCGTGCAGCTTTCAAGATTaGCCGAAAGGCTCCCAGAGCTCTGTTTTAAATGGT +
Preference number: 6 (lower is better)
Translates to: HIHVSAPCSFQD*PKGSQSSVLNG
Trigger: ACCATTTAAAACAGAGCTCTGGGAGCCTTTCGGCAAATCTTGAAAGCTGCACGGTGCAGAGACATGGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5
ENST00000617001.1
CDS CAA 90 bp TTGGGAAGTCACATCCATGTCTCTGCACCGTGCAGCTTTCAAGATTaGCCGAAAGGCTCCCAGAGCTCTGTTTTAAATGGTGAATCCATC +
Preference number: 6 (lower is better)
Translates to: LGSHIHVSAPCSFQD*PKGSQSSVLNGESI
Trigger: GATGGATTCACCATTTAAAACAGAGCTCTGGGAGCCTTTCGGCAAATCTTGAAAGCTGCACGGTGCAGAGACATGGATGTGACTTCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5
ENST00000617001.1
CDS TCA 72 bp GGTGAATCCATCTTTAGAAAGAAGCGTGATTCTCCTTaGAGTGAGCCTGGCATTTGTCAGACAGGAAACTCC +
Preference number: 6 (lower is better)
Translates to: GESIFRKKRDSP*SEPGICQTGNS
Trigger: GGAGTTTCCTGTCTGACAAATGCCAGGCTCACTTCAAGGAGAATCACGCTTCTTTCTAAAGATGGATTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297469.3
ENST00000397088.4
ENST00000397092.5
ENST00000401670.1
ENST00000413368.5