RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000115159

Ensembl transcript IDs: ENST00000310454.10, ENST00000409125.8, ENST00000409674.5, ENST00000409861.5, ENST00000416888.5, ENST00000438166.7, ENST00000540309.5

Found 246 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGTTTCTGTTTCTTTCAGAGGTGGTGGGTGAGTGCGTAGGTGAGTaGACCTCCAGTGTTTACATTGTGACATACAGGCTCAGAATCCAC +
Preference number: 1 (lower is better)
Translates to: QFLFLSEVVGECVGE*TSSVYIVTYRLRIH
Trigger: GTGGATTCTGAGCCTGTATGTCACAATGTAAACACTGGAGGTTCACTCACCTACGCACTCACCCACCACCTCTGAAAGAAACAGAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
3UTR-3UTR TCA 90 bp TGCCCGGGCCCTACTGTAACAGAATCAGGGAGGGTACAAGTCATCGTTATCTTGGAGTGCGTAGGTGAGTaGACCTCCAGTGTTTACATT +
Preference number: 2 (lower is better)
Translates to: CPGPTVTESGRVQVIVILECVGE*TSSVYI
Trigger: AATGTAAACACTGGAGGTTCACTCACCTACGCACTC...CAAGATAACGATGACTTGTACCCTCCCTGATTCTGTTACAGTAGGGCCCGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
3UTR-3UTR CCA 90 bp TGCCCGGGCCCTACTGTAACAGAATCAGGGAGGGTACAAGTCATCGTTATCTTGGTTCACAGTGATACCTaGGAGCATCACTTGCTCTGT +
Preference number: 2 (lower is better)
Translates to: CPGPTVTESGRVQVIVILVHSDT*EHHLLC
Trigger: ACAGAGCAAGTGATGCTCCCAGGTATCACTGTGAAC...CAAGATAACGATGACTTGTACCCTCCCTGATTCTGTTACAGTAGGGCCCGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
3UTR-3UTR TCA 90 bp CCCTTGGAAAGTCTTTGTGTGCCCCCGTTTGAAGACCACTGCTTTAAAACACTGGACCAGAATGCGGTGTaGTCAGAATTTATCTTCACG +
Preference number: 2 (lower is better)
Translates to: PLESLCVPPFEDHCFKTLDQNAV*SEFIFT
Trigger: CGTGAAGATAAATTCTGATCACACCGCATTCTGGTC...CAGTGTTTTAAAGCAGTGGTCTTCAAACGGGGGCACACAAAGACTTTCCAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409861.5
3UTR-3UTR TCA 90 bp GTTGGCTGTGGATTTACTGCCCAGACTCACAATCCTCCACAACTACGGTCCACTCATCCATTTGGACATTaGTACTCTCTAATACACGCT +
Preference number: 2 (lower is better)
Translates to: VGCGFTAQTHNPPQLRSTHPFGH*YSLIHA
Trigger: AGCGTGTATTAGAGAGTATCAATGTCCAAATGGATG...AGTGGACCGTAGTTGTGGAGGATTGTGAGTCTGGGCAGTAAATCCACAGCCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540309.5
3UTR-3UTR GCA 90 bp TGCCCGGGCCCTACTGTAACAGAATCAGGGAGGGTACAAGTCATCGTTATCTTGCACATGCTATCTGTATaGATGTCACAAAATGTCTCC +
Preference number: 2 (lower is better)
Translates to: CPGPTVTESGRVQVIVILHMLSV*MSQNVS
Trigger: GGAGACATTTTGTGACATGCATACAGATAGCATGTG...CAAGATAACGATGACTTGTACCCTCCCTGATTCTGTTACAGTAGGGCCCGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
3UTR-3UTR CCA 90 bp TTTGTTGGCTGTGGATTTACTGCCCAGACTCACAATCCTCCACAACTACGGTCCCGTTTCTATGTTTGTTaGCTGTGGATTTACTGCCCA +
Preference number: 2 (lower is better)
Translates to: FVGCGFTAQTHNPPQLRSRFYVC*LWIYCP
Trigger: TGGGCAGTAAATCCACAGCCAACAAACATAGAAACG...GGACCGTAGTTGTGGAGGATTGTGAGTCTGGGCAGTAAATCCACAGCCAACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540309.5
3UTR-3UTR GCA 90 bp TGCCCGGGCCCTACTGTAACAGAATCAGGGAGGGTACAAGTCATCGTTATCTTGCCAGTTAGCCAGTCATaGTCTAGATATAAAAATGTG +
Preference number: 2 (lower is better)
Translates to: CPGPTVTESGRVQVIVILPVSQS*SRYKNV
Trigger: CACATTTTTATATCTAGAGCATGACTGGCTAACTGG...CAAGATAACGATGACTTGTACCCTCCCTGATTCTGTTACAGTAGGGCCCGGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
3UTR-3UTR CCA 90 bp ATGTTTGTTGGCTGTGGATTTACTGCCCAGACTCACAATCCTCCACAACTACGGGGTTTCAGTCATCTCTaGTTGTTACATGGTGATTTG +
Preference number: 2 (lower is better)
Translates to: MFVGCGFTAQTHNPPQLRGFSHL*LLHGDL
Trigger: CAAATCACCATGTAACAACCAGAGATGACTGAAACC...CCGTAGTTGTGGAGGATTGTGAGTCTGGGCAGTAAATCCACAGCCAACAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540309.5
3UTR-3UTR TCA 90 bp CCCTTGGAAAGTCTTTGTGTGCCCCCGTTTGAAGACCACTGCTTTAAAACACTGCTCCATGTATCTACTTaGATTAGATTGAACATGCTC +
Preference number: 2 (lower is better)
Translates to: PLESLCVPPFEDHCFKTLLHVST*IRLNML
Trigger: GAGCATGTTCAATCTAATTCAAGTAGATACATGGAG...CAGTGTTTTAAAGCAGTGGTCTTCAAACGGGGGCACACAAAGACTTTCCAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409861.5
3UTR-3UTR TCA 90 bp CACAGTGATACCTGGGAGCATCACTTGCTCTGTTTTAGGATTTCCCTTAGGAAGCTGGTTGTTACATGGTaGTTTGTCGTTTCTATGTTT +
Preference number: 2 (lower is better)
Translates to: HSDTWEHHLLCFRISLRKLVVTW*FVVSMF
Trigger: AAACATAGAAACGACAAATCACCATGTAACAACCAG...CTTCCTAAGGGAAATCCTAAAACAGAGCAAGTGATGCTCCCAGGTATCACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
3UTR-3UTR GCA 90 bp CACAGTGATACCTGGGAGCATCACTTGCTCTGTTTTAGGATTTCCCTTAGGAAGCCCAGCAAATGTCAATaGTATCCTTATCTTATACCT +
Preference number: 2 (lower is better)
Translates to: HSDTWEHHLLCFRISLRKPSKCQ*YPYLIP
Trigger: AGGTATAAGATAAGGATAGCATTGACATTTGCTGGG...CTTCCTAAGGGAAATCCTAAAACAGAGCAAGTGATGCTCCCAGGTATCACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
3UTR-3UTR CCA 90 bp CACAGTGATACCTGGGAGCATCACTTGCTCTGTTTTAGGATTTCCCTTAGGAAGGATGACCTTGGAAACTaGTTATGTGCCTTATTTAAC +
Preference number: 2 (lower is better)
Translates to: HSDTWEHHLLCFRISLRKDDLGN*LCALFN
Trigger: GTTAAATAAGGCACATAACCAGTTTCCAAGGTCATC...CTTCCTAAGGGAAATCCTAAAACAGAGCAAGTGATGCTCCCAGGTATCACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
3UTR-3UTR TCA 90 bp TGCCACCAAAATGTAGCAAAAGCATCCCAAACTGCATTACTTGTTAAATTCAATGGAGGAAGATGGGGCTaGGAAATCTCCAGAAACACT +
Preference number: 2 (lower is better)
Translates to: CHQNVAKASQTALLVKFNGGRWG*EISRNT
Trigger: AGTGTTTCTGGAGATTTCTCAGCCCCATCTTCCTCC...ATTGAATTTAACAAGTAATGCAGTTTGGGATGCTTTTGCTACATTTTGGTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
3UTR-3UTR CCA 90 bp TACAGAAGGGGAAAGACTTTAAGCAACCATGATGACCTTGGAAACTGGTTATGTCGTTTCTATGTTTGTTaGCTGTGGATTTACTGCCCA +
Preference number: 2 (lower is better)
Translates to: YRRGKTLSNHDDLGNWLCRFYVC*LWIYCP
Trigger: TGGGCAGTAAATCCACAGCCAACAAACATAGAAACG...ACATAACCAGTTTCCAAGGTCATCATGGTTGCTTAAAGTCTTTCCCCTTCTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
3UTR-3UTR CCA 90 bp AGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTCGTTTCTATGTTTGTTaGCTGTGGATTTACTGCCCA +
Preference number: 2 (lower is better)
Translates to: RQLSTFIISEWFQSSLVVRFYVC*LWIYCP
Trigger: TGGGCAGTAAATCCACAGCCAACAAACATAGAAACG...AACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
3UTR CAA 90 bp TCCTTATCTTATACCTGTGATTCTGGAAGCTTTCAGAGTTTCTCTTaGAGACTTGCTCCAGTAACCAGATCTAAACTTTTCCTTCCCTCT +
Preference number: 2 (lower is better)
Translates to: SLSYTCDSGSFQSFS*RLAPVTRSKLFLPS
Trigger: AGAGGGAAGGAAAAGTTTAGATCTGGTTACTGGAGCAAGTCTCAAAGAGAAACTCTGAAAGCTTCCAGAATCACAGGTATAAGATAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
3UTR-3UTR TCA 90 bp GTAATGATGACCAGAATGCGGTGTGATCAGAATTTATCTTCACGACTCCATGTACTACTTGAATTAGATTaGACATGCTCCCCAAGAAAC +
Preference number: 2 (lower is better)
Translates to: VMMTRMRCDQNLSSRLHVLLELD*TCSPRN
Trigger: GTTTCTTGGGGAGCATGTTCAATCTAATTCAAGTAG...TACATGGAGTCGTGAAGATAAATTCTGATCACACCGCATTCTGGTCATCATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409861.5
3UTR-3UTR CCA 90 bp CAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACACGTTTCTATGTTTGTTaGCTGTGGATTTACTGCCCA +
Preference number: 2 (lower is better)
Translates to: QLSTFIISEWFQSSLVVTRFYVC*LWIYCP
Trigger: TGGGCAGTAAATCCACAGCCAACAAACATAGAAACG...TGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
3UTR-3UTR CCA 90 bp CTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGGCGTTTCTATGTTTGTTaGCTGTGGATTTACTGCCCA +
Preference number: 2 (lower is better)
Translates to: LSTFIISEWFQSSLVVTWRFYVC*LWIYCP
Trigger: TGGGCAGTAAATCCACAGCCAACAAACATAGAAACG...CCATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
3UTR-3UTR GCA 90 bp TACAGAAGGGGAAAGACTTTAAGCAACCATGATGACCTTGGAAACTGGTTATGTCCAGTTAGCCAGTCATaGTCTAGATATAAAAATGTG +
Preference number: 2 (lower is better)
Translates to: YRRGKTLSNHDDLGNWLCPVSQS*SRYKNV
Trigger: CACATTTTTATATCTAGAGCATGACTGGCTAACTGG...ACATAACCAGTTTCCAAGGTCATCATGGTTGCTTAAAGTCTTTCCCCTTCTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
3UTR-3UTR CCA 90 bp ACAGAGAGAGAGAGCACAAATGTACCATATTGTGTATATCATCTGGGATATTTTCTGAGAATATTTCCATaGAGTACAGAAGGGGAAAGA +
Preference number: 2 (lower is better)
Translates to: TERESTNVPYCVYHLGYFLRIFP*STEGER
Trigger: TCTTTCCCCTTCTGTACTCCATGGAAATATTCTCAG...AAAATATCCCAGATGATATACACAATATGGTACATTTGTGCTCTCTCTCTCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
3UTR-3UTR TCA 90 bp ACAGAGAGAGAGAGCACAAATGTACCATATTGTGTATATCATCTGGGATATTTTCTGGTTGTTACATGGTaGTTTGTCGTTTCTATGTTT +
Preference number: 2 (lower is better)
Translates to: TERESTNVPYCVYHLGYFLVVTW*FVVSMF
Trigger: AAACATAGAAACGACAAATCACCATGTAACAACCAG...AAAATATCCCAGATGATATACACAATATGGTACATTTGTGCTCTCTCTCTCTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
3UTR-3UTR CAA 90 bp TGCCCGGGCCCTACTGTAACAGAATCAGGGAGGGTACAAGTCATCGTTATCTTGGCAACCATGATGACCTaGGAAACTGGTTATGTGCCT +
Preference number: 3 (lower is better)
Translates to: CPGPTVTESGRVQVIVILATMMT*ETGYVP
Trigger: AGGCACATAACCAGTTTCCAAGGTCATCATGGTTGC...CAAGATAACGATGACTTGTACCCTCCCTGATTCTGTTACAGTAGGGCCCGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
3UTR-3UTR CAA 90 bp TGCCCGGGCCCTACTGTAACAGAATCAGGGAGGGTACAAGTCATCGTTATCTTGCCTATTACATCCAAATaGCCACTTAAATGCTGGTTT +
Preference number: 3 (lower is better)
Translates to: CPGPTVTESGRVQVIVILPITSK*PLKCWF
Trigger: AAACCAGCATTTAAGTGGCAATTTGGATGTAATAGG...CAAGATAACGATGACTTGTACCCTCCCTGATTCTGTTACAGTAGGGCCCGGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
3UTR GCA 72 bp ATTTGTCGTTTCTATGTTTGTTGGCTGTGGATTTACTaGCCAGACTCACAATCCTCCACAACTACGGTCCAC +
Preference number: 3 (lower is better)
Translates to: ICRFYVCWLWIY*PDSQSSTTTVH
Trigger: GTGGACCGTAGTTGTGGAGGATTGTGAGTCTGGGCAGTAAATCCACAGCCAACAAACATAGAAACGACAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540309.5
3UTR-3UTR CAA 90 bp ATGGTGATTTGTCGTTTCTATGTTTGTTGGCTGTGGATTTACTGCCCAGACTCATCGTTTCTATGTTTGTaGGCTGTGGATTTACTGCCC +
Preference number: 3 (lower is better)
Translates to: MVICRFYVCWLWIYCPDSSFLCL*AVDLLP
Trigger: GGGCAGTAAATCCACAGCCAACAAACATAGAAACGA...TGAGTCTGGGCAGTAAATCCACAGCCAACAAACATAGAAACGACAAATCACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540309.5
3UTR-3UTR CAA 90 bp TACAGAAGGGGAAAGACTTTAAGCAACCATGATGACCTTGGAAACTGGTTATGTTCGTTTCTATGTTTGTaGGCTGTGGATTTACTGCCC +
Preference number: 3 (lower is better)
Translates to: YRRGKTLSNHDDLGNWLCSFLCL*AVDLLP
Trigger: GGGCAGTAAATCCACAGCCAACAAACATAGAAACGA...ACATAACCAGTTTCCAAGGTCATCATGGTTGCTTAAAGTCTTTCCCCTTCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
3UTR TCA 72 bp CCTCTTCAACTAGGTAATGATGACCAGAATGCGGTGTaGTCAGAATTTATCTTCACGACTCCATGTATCTAC +
Preference number: 3 (lower is better)
Translates to: PLQLGNDDQNAV*SEFIFTTPCIY
Trigger: GTAGATACATGGAGTCGTGAAGATAAATTCTGATCACACCGCATTCTGGTCATCATTACCTAGTTGAAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409861.5
3UTR-3UTR CAA 90 bp GCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGTCGTTTCTATGTTTGTaGGCTGTGGATTTACTGCCC +
Preference number: 3 (lower is better)
Translates to: AIHIHYFRVVSVISGCYMSFLCL*AVDLLP
Trigger: GGGCAGTAAATCCACAGCCAACAAACATAGAAACGA...CATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
3UTR-3UTR CAA 90 bp AAAAAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTCGTTTCTATGTTTGTaGGCTGTGGATTTACTGCCC +
Preference number: 3 (lower is better)
Translates to: KKAAIHIHYFRVVSVISGSFLCL*AVDLLP
Trigger: GGGCAGTAAATCCACAGCCAACAAACATAGAAACGA...ACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
3UTR-3UTR CAA 90 bp AGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATTCGTTTCTATGTTTGTaGGCTGTGGATTTACTGCCC +
Preference number: 3 (lower is better)
Translates to: SYPHSLFQSGFSHLWLLHSFLCL*AVDLLP
Trigger: GGGCAGTAAATCCACAGCCAACAAACATAGAAACGA...ATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
3UTR-3UTR CAA 90 bp AAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTTGTCGTTTCTATGTTaGTTGGCTGTGGATTTACTG +
Preference number: 3 (lower is better)
Translates to: KAAIHIHYFRVVSVISGCLSFLC*LAVDLL
Trigger: CAGTAAATCCACAGCCAACAAACATAGAAACGACAA...ACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
3UTR-3UTR CAA 90 bp CAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATTGTCGTTTCTATGTTaGTTGGCTGTGGATTTACTG +
Preference number: 3 (lower is better)
Translates to: QLSTFIISEWFQSSLVVTLSFLC*LAVDLL
Trigger: CAGTAAATCCACAGCCAACAAACATAGAAACGACAA...TGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
3UTR-3UTR CAA 90 bp AAAAAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTTGTCGTTTCTATGTTaGTTGGCTGTGGATTTACTG +
Preference number: 3 (lower is better)
Translates to: KKAAIHIHYFRVVSVISGLSFLC*LAVDLL
Trigger: CAGTAAATCCACAGCCAACAAACATAGAAACGACAA...ACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
3UTR-3UTR CAA 90 bp TACAGAAGGGGAAAGACTTTAAGCAACCATGATGACCTTGGAAACTGGTTATGTCCTATTACATCCAAATaGCCACTTAAATGCTGGTTT +
Preference number: 3 (lower is better)
Translates to: YRRGKTLSNHDDLGNWLCPITSK*PLKCWF
Trigger: AAACCAGCATTTAAGTGGCAATTTGGATGTAATAGG...ACATAACCAGTTTCCAAGGTCATCATGGTTGCTTAAAGTCTTTCCCCTTCTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
3UTR-3UTR CAA 90 bp ACAGAGAGAGAGAGCACAAATGTACCATATTGTGTATATCATCTGGGATATTTTGTGTCGGGATGGGGGTaGGTGATTATTTTTCCATTT +
Preference number: 3 (lower is better)
Translates to: TERESTNVPYCVYHLGYFVSGWG*VIIFPF
Trigger: AAATGGAAAAATAATCACCAACCCCCATCCCGACAC...AAAATATCCCAGATGATATACACAATATGGTACATTTGTGCTCTCTCTCTCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
3UTR GCA 72 bp GATGAAACTATCACTGTAACTCCCAGCAAATGTCAATaGTATCCTTATCTTATACCTGTGATTCTGGAAGCT +
Preference number: 3 (lower is better)
Translates to: DETITVTPSKCQ*YPYLIPVILEA
Trigger: AGCTTCCAGAATCACAGGTATAAGATAAGGATAGCATTGACATTTGCTGGGAGTTACAGTGATAGTTTCATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
3UTR-3UTR CAA 90 bp AGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATTTGTCGTTTCTATGTTaGTTGGCTGTGGATTTACTG +
Preference number: 3 (lower is better)
Translates to: SYPHSLFQSGFSHLWLLHLSFLC*LAVDLL
Trigger: CAGTAAATCCACAGCCAACAAACATAGAAACGACAA...ATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
3UTR-3UTR CAA 90 bp TGCCACCAAAATGTAGCAAAAGCATCCCAAACTGCATTACTTGTTAAATTCAATGATGGTAAGCTAGATTaGACAATACCACATGCTTCA +
Preference number: 3 (lower is better)
Translates to: CHQNVAKASQTALLVKFNDGKLD*TIPHAS
Trigger: TGAAGCATGTGGTATTGTCAAATCTAGCTTACCATC...ATTGAATTTAACAAGTAATGCAGTTTGGGATGCTTTTGCTACATTTTGGTGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CCA 90 bp AGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTCCAGCCTCATACAGGTaGGGGGAGGCGGAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: RQLSTFIISEWFQSSLVVPASYR*GEAESP
Trigger: GGGGCTCTCCGCCTCCCCCCACCTGTATGAGGCTGG...AACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310454.10
CDS-3UTR GCA 90 bp CCCTTGGAAAGTCTTTGTGTGCCCCCGTTTGAAGACCACTGCTTTAAAACACTGACGGATTCCACTCCATaGTGCCAGGACATCCCCTCT +
Preference number: 4 (lower is better)
Translates to: PLESLCVPPFEDHCFKTLTDSTP*CQDIPS
Trigger: AGAGGGGATGTCCTGGCAGCATGGAGTGGAATCCGT...CAGTGTTTTAAAGCAGTGGTCTTCAAACGGGGGCACACAAAGACTTTCCAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409861.5
CDS-3UTR CCA 90 bp CCCTTGGAAAGTCTTTGTGTGCCCCCGTTTGAAGACCACTGCTTTAAAACACTGCCATGTAATTGGCTGTaGCAGCCCCATACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: PLESLCVPPFEDHCFKTLPCNWL*QPHTWQ
Trigger: CTGCCAGGTATGGGGCTGCCACAGCCAATTACATGG...CAGTGTTTTAAAGCAGTGGTCTTCAAACGGGGGCACACAAAGACTTTCCAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409861.5
CDS-3UTR CCA 90 bp CCCTTGGAAAGTCTTTGTGTGCCCCCGTTTGAAGACCACTGCTTTAAAACACTGCCCATCACTGGTCGCTaGGTCAAGAAGTCCCATGCT +
Preference number: 4 (lower is better)
Translates to: PLESLCVPPFEDHCFKTLPITGR*VKKSHA
Trigger: AGCATGGGACTTCTTGACCCAGCGACCAGTGATGGG...CAGTGTTTTAAAGCAGTGGTCTTCAAACGGGGGCACACAAAGACTTTCCAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409861.5
CDS-3UTR CCA 90 bp ATGTTTGTTGGCTGTGGATTTACTGCCCAGACTCACAATCCTCCACAACTACGGCCCATCACTGGTCGCTaGGTCAAGAAGTCCCATGCT +
Preference number: 4 (lower is better)
Translates to: MFVGCGFTAQTHNPPQLRPITGR*VKKSHA
Trigger: AGCATGGGACTTCTTGACCCAGCGACCAGTGATGGG...CCGTAGTTGTGGAGGATTGTGAGTCTGGGCAGTAAATCCACAGCCAACAAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540309.5
CDS-3UTR TCA 90 bp AGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATTCCTGGCTCCCCGCCTaGATGTCAGCGCAGGGACCC +
Preference number: 4 (lower is better)
Translates to: SYPHSLFQSGFSHLWLLHSWLPA*MSAQGP
Trigger: GGGTCCCTGCGCTGACATTCAGGCGGGGAGCCAGGA...ATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310454.10
CDS-3UTR TCA 90 bp CCCTTGGAAAGTCTTTGTGTGCCCCCGTTTGAAGACCACTGCTTTAAAACACTGAACAACGCACATGCCTaGCTCATAGCAGTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PLESLCVPPFEDHCFKTLNNAHA*LIAVWW
Trigger: CCACCACACTGCTATGAGTCAGGCATGTGCGTTGTT...CAGTGTTTTAAAGCAGTGGTCTTCAAACGGGGGCACACAAAGACTTTCCAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409861.5
CDS-3UTR TCA 90 bp CACAGGCGTAGTTCTCTTCTTAAAGTTTTACAGTTTCTTAAGTCGATTCCGCTGCCGCTGACCCTCTGGTaGCAGCATCTAGCGCACAGC +
Preference number: 4 (lower is better)
Translates to: HRRSSLLKVLQFLKSIPLPLTLW*QHLAHS
Trigger: GCTGTGCGCTAGATGCTGTCACCAGAGGGTCAGCGG...CAGCGGAATCGACTTAAGAAACTGTAAAACTTTAAGAAGAGAACTACGCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416888.5
CDS-3UTR TCA 90 bp CAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACACCGCTGACCCTCTGGTaGCAGCATCTAGCGCACAGC +
Preference number: 4 (lower is better)
Translates to: QLSTFIISEWFQSSLVVTPLTLW*QHLAHS
Trigger: GCTGTGCGCTAGATGCTGTCACCAGAGGGTCAGCGG...TGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409125.8
CDS-3UTR CCA 90 bp TTTGTTGGCTGTGGATTTACTGCCCAGACTCACAATCCTCCACAACTACGGTCCAAGTCCCATGCTCTCTaGGCTGTAATAACCAGGCAT +
Preference number: 4 (lower is better)
Translates to: FVGCGFTAQTHNPPQLRSKSHAL*AVITRH
Trigger: ATGCCTGGTTATTACAGCCCAGAGAGCATGGGACTT...GGACCGTAGTTGTGGAGGATTGTGAGTCTGGGCAGTAAATCCACAGCCAACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540309.5
CDS-3UTR TCA 90 bp ATGTCAATGCTATCCTTATCTTATACCTGTGATTCTGGAAGCTTTCAGAGTTTCCAGGGGGTGGAATGCTaGGCACAGGTTCCCCAGACC +
Preference number: 4 (lower is better)
Translates to: MSMLSLSYTCDSGSFQSFQGVEC*AQVPQT
Trigger: GGTCTGGGGAACCTGTGCTCAGCATTCCACCCCCTG...GAAACTCTGAAAGCTTCCAGAATCACAGGTATAAGATAAGGATAGCATTGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310454.10
CDS-3UTR GCA 90 bp GGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTAGGCGGCAAGATGCTGTaGCACCTCGCTTTCAAGTCC +
Preference number: 4 (lower is better)
Translates to: GSYPHSLFQSGFSHLWLLGGKML*HLAFKS
Trigger: GGACTTGAAAGCGAGGTGGCACAGCATCTTGCCGCC...TAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
CDS-3UTR GCA 90 bp GTAATGATGACCAGAATGCGGTGTGATCAGAATTTATCTTCACGACTCCATGTAGGCGGCAAGATGCTGTaGCACCTCGCTTTCAAGTCC +
Preference number: 4 (lower is better)
Translates to: VMMTRMRCDQNLSSRLHVGGKML*HLAFKS
Trigger: GGACTTGAAAGCGAGGTGGCACAGCATCTTGCCGCC...TACATGGAGTCGTGAAGATAAATTCTGATCACACCGCATTCTGGTCATCATTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409861.5
CDS-3UTR CCA 90 bp AAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTGTCCGCCCTGGGATCTaGCTTCTCCTACTCTGTACC +
Preference number: 4 (lower is better)
Translates to: KAAIHIHYFRVVSVISGCVRPGI*LLLLCT
Trigger: GGTACAGAGTAGGAGAAGCCAGATCCCAGGGCGGAC...ACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310454.10
CDS-3UTR CCA 90 bp CCCTTGGAAAGTCTTTGTGTGCCCCCGTTTGAAGACCACTGCTTTAAAACACTGAAGTCCCATGCTCTCTaGGCTGTAATAACCAGGCAT +
Preference number: 4 (lower is better)
Translates to: PLESLCVPPFEDHCFKTLKSHAL*AVITRH
Trigger: ATGCCTGGTTATTACAGCCCAGAGAGCATGGGACTT...CAGTGTTTTAAAGCAGTGGTCTTCAAACGGGGGCACACAAAGACTTTCCAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409861.5
CDS-3UTR CCA 90 bp TGCCCGGGCCCTACTGTAACAGAATCAGGGAGGGTACAAGTCATCGTTATCTTGCGTTTCTATGTTTGTTaGCTGTGGATTTACTGCCCA +
Preference number: 4 (lower is better)
Translates to: CPGPTVTESGRVQVIVILRFYVC*LWIYCP
Trigger: TGGGCAGTAAATCCACAGCCAACAAACATAGAAACG...CAAGATAACGATGACTTGTACCCTCCCTGATTCTGTTACAGTAGGGCCCGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CCA 90 bp CCCTTGGAAAGTCTTTGTGTGCCCCCGTTTGAAGACCACTGCTTTAAAACACTGCTCATAGCAGTGTGGTaGTCCCTAGGATATGAGTGT +
Preference number: 4 (lower is better)
Translates to: PLESLCVPPFEDHCFKTLLIAVW*SLGYEC
Trigger: ACACTCATATCCTAGGGACCACCACACTGCTATGAG...CAGTGTTTTAAAGCAGTGGTCTTCAAACGGGGGCACACAAAGACTTTCCAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409861.5
CDS-3UTR TCA 90 bp TGCCCGGGCCCTACTGTAACAGAATCAGGGAGGGTACAAGTCATCGTTATCTTGGGCTCAGAATCCACTTaGATAAGGCATAAAGATACT +
Preference number: 4 (lower is better)
Translates to: CPGPTVTESGRVQVIVILGSEST*IRHKDT
Trigger: AGTATCTTTATGCCTTATTCAAGTGGATTCTGAGCC...CAAGATAACGATGACTTGTACCCTCCCTGATTCTGTTACAGTAGGGCCCGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR GCA 90 bp CAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACAGGCGGCAAGATGCTGTaGCACCTCGCTTTCAAGTCC +
Preference number: 4 (lower is better)
Translates to: QLSTFIISEWFQSSLVVTGGKML*HLAFKS
Trigger: GGACTTGAAAGCGAGGTGGCACAGCATCTTGCCGCC...TGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
CDS-3UTR GCA 90 bp CTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGGGGCGGCAAGATGCTGTaGCACCTCGCTTTCAAGTCC +
Preference number: 4 (lower is better)
Translates to: LSTFIISEWFQSSLVVTWGGKML*HLAFKS
Trigger: GGACTTGAAAGCGAGGTGGCACAGCATCTTGCCGCC...CCATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
CDS-3UTR GCA 90 bp CCCTTGGAAAGTCTTTGTGTGCCCCCGTTTGAAGACCACTGCTTTAAAACACTGCTTAAACAACGCACATaGCTGACTCATAGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: PLESLCVPPFEDHCFKTLLKQRT*LTHSSV
Trigger: CACACTGCTATGAGTCAGGCATGTGCGTTGTTTAAG...CAGTGTTTTAAAGCAGTGGTCTTCAAACGGGGGCACACAAAGACTTTCCAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409861.5
CDS-3UTR CCA 90 bp AAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTCCATGTAATTGGCTGTaGCAGCCCCATACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: KAAIHIHYFRVVSVISGCPCNWL*QPHTWQ
Trigger: CTGCCAGGTATGGGGCTGCCACAGCCAATTACATGG...ACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CCA 90 bp GGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACCATGTAATTGGCTGTaGCAGCCCCATACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GSYPHSLFQSGFSHLWLLPCNWL*QPHTWQ
Trigger: CTGCCAGGTATGGGGCTGCCACAGCCAATTACATGG...TAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CCA 90 bp AGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTCCATGTAATTGGCTGTaGCAGCCCCATACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: RQLSTFIISEWFQSSLVVPCNWL*QPHTWQ
Trigger: CTGCCAGGTATGGGGCTGCCACAGCCAATTACATGG...AACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CCA 90 bp AGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTCCCATCACTGGTCGCTaGGTCAAGAAGTCCCATGCT +
Preference number: 4 (lower is better)
Translates to: RQLSTFIISEWFQSSLVVPITGR*VKKSHA
Trigger: AGCATGGGACTTCTTGACCCAGCGACCAGTGATGGG...AACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CCA 90 bp TGCCCGGGCCCTACTGTAACAGAATCAGGGAGGGTACAAGTCATCGTTATCTTGGGTTTCAGTCATCTCTaGTTGTTACATGGTGATTTG +
Preference number: 4 (lower is better)
Translates to: CPGPTVTESGRVQVIVILGFSHL*LLHGDL
Trigger: CAAATCACCATGTAACAACCAGAGATGACTGAAACC...CAAGATAACGATGACTTGTACCCTCCCTGATTCTGTTACAGTAGGGCCCGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR TCA 90 bp AAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTGCCATTTCTTAGCCTaGCGACTTCTCGTTGTCCGC +
Preference number: 4 (lower is better)
Translates to: KAAIHIHYFRVVSVISGCCHFLA*RLLVVR
Trigger: GCGGACAACGAGAAGTCGTCAGGCTAAGAAATGGCA...ACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310454.10
CDS-3UTR TCA 90 bp AAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTAACAACGCACATGCCTaGCTCATAGCAGTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: KAAIHIHYFRVVSVISGCNNAHA*LIAVWW
Trigger: CCACCACACTGCTATGAGTCAGGCATGTGCGTTGTT...ACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409125.8
ENST00000409674.5
CDS-3UTR TCA 90 bp CGTAGTTCTCTTCTTAAAGTTTTACAGTTTCTTAAGTCGATTCCGCTGACCCTCAACAACGCACATGCCTaGCTCATAGCAGTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RSSLLKVLQFLKSIPLTLNNAHA*LIAVWW
Trigger: CCACCACACTGCTATGAGTCAGGCATGTGCGTTGTT...GAGGGTCAGCGGAATCGACTTAAGAAACTGTAAAACTTTAAGAAGAGAACTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416888.5
CDS-3UTR GCA 90 bp GGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTAGATTCCACTCCATGCTaGCAGGACATCCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: GSYPHSLFQSGFSHLWLLDSTPC*QDIPSS
Trigger: AGAAGAGGGGATGTCCTGGCAGCATGGAGTGGAATC...TAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
CDS-3UTR GCA 90 bp GTAATGATGACCAGAATGCGGTGTGATCAGAATTTATCTTCACGACTCCATGTAGATTCCACTCCATGCTaGCAGGACATCCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: VMMTRMRCDQNLSSRLHVDSTPC*QDIPSS
Trigger: AGAAGAGGGGATGTCCTGGCAGCATGGAGTGGAATC...TACATGGAGTCGTGAAGATAAATTCTGATCACACCGCATTCTGGTCATCATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409861.5
CDS-3UTR GCA 90 bp AAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTGATTCCACTCCATGCTaGCAGGACATCCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: KAAIHIHYFRVVSVISGCDSTPC*QDIPSS
Trigger: AGAAGAGGGGATGTCCTGGCAGCATGGAGTGGAATC...ACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
CDS-3UTR GCA 90 bp CAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACAACGGATTCCACTCCATaGTGCCAGGACATCCCCTCT +
Preference number: 4 (lower is better)
Translates to: QLSTFIISEWFQSSLVVTTDSTP*CQDIPS
Trigger: AGAGGGGATGTCCTGGCAGCATGGAGTGGAATCCGT...TGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
CDS-3UTR GCA 90 bp GCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGACGGATTCCACTCCATaGTGCCAGGACATCCCCTCT +
Preference number: 4 (lower is better)
Translates to: AIHIHYFRVVSVISGCYMTDSTP*CQDIPS
Trigger: AGAGGGGATGTCCTGGCAGCATGGAGTGGAATCCGT...CATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
CDS-3UTR GCA 90 bp CCCTTGGAAAGTCTTTGTGTGCCCCCGTTTGAAGACCACTGCTTTAAAACACTGTGTCCACTTTCCACCTaGTATAGTAATAAGGCCACT +
Preference number: 4 (lower is better)
Translates to: PLESLCVPPFEDHCFKTLCPLST*YSNKAT
Trigger: AGTGGCCTTATTACTATAGCAGGTGGAAAGTGGACA...CAGTGTTTTAAAGCAGTGGTCTTCAAACGGGGGCACACAAAGACTTTCCAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409861.5
CDS-3UTR GCA 90 bp TGCCCGGGCCCTACTGTAACAGAATCAGGGAGGGTACAAGTCATCGTTATCTTGCAAAATGAGCTAAGATaGTGTCTTTCTCTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: CPGPTVTESGRVQVIVILQNELR*CLSLQF
Trigger: AAACTGCAGAGAAAGACAGCATCTTAGCTCATTTTG...CAAGATAACGATGACTTGTACCCTCCCTGATTCTGTTACAGTAGGGCCCGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR GCA 90 bp TGCCCGGGCCCTACTGTAACAGAATCAGGGAGGGTACAAGTCATCGTTATCTTGTGCTCTATAAATGCATaGAGCTCATTCTGTGTATCA +
Preference number: 4 (lower is better)
Translates to: CPGPTVTESGRVQVIVILCSINA*SSFCVS
Trigger: TGATACACAGAATGAGCTGCATGCATTTATAGAGCA...CAAGATAACGATGACTTGTACCCTCCCTGATTCTGTTACAGTAGGGCCCGGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CCA 90 bp CTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGGTCTCGTTGTCCGCCCTaGGATCTGGCTTCTCCTACT +
Preference number: 4 (lower is better)
Translates to: LSTFIISEWFQSSLVVTWSRCPP*DLASPT
Trigger: AGTAGGAGAAGCCAGATCCCAGGGCGGACAACGAGA...CCATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310454.10
CDS-3UTR CCA 90 bp AAAAAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTCCATGTAATTGGCTGTaGCAGCCCCATACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: KKAAIHIHYFRVVSVISGPCNWL*QPHTWQ
Trigger: CTGCCAGGTATGGGGCTGCCACAGCCAATTACATGG...ACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CCA 90 bp CTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGGCCATGTAATTGGCTGTaGCAGCCCCATACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LSTFIISEWFQSSLVVTWPCNWL*QPHTWQ
Trigger: CTGCCAGGTATGGGGCTGCCACAGCCAATTACATGG...CCATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CCA 90 bp AAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTCTACCTCCATGTAATTaGCTGTGGCAGCCCCATACC +
Preference number: 4 (lower is better)
Translates to: KAAIHIHYFRVVSVISGCLPPCN*LWQPHT
Trigger: GGTATGGGGCTGCCACAGCCAATTACATGGAGGTAG...ACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CCA 90 bp GTAATGATGACCAGAATGCGGTGTGATCAGAATTTATCTTCACGACTCCATGTACTACCTCCATGTAATTaGCTGTGGCAGCCCCATACC +
Preference number: 4 (lower is better)
Translates to: VMMTRMRCDQNLSSRLHVLPPCN*LWQPHT
Trigger: GGTATGGGGCTGCCACAGCCAATTACATGGAGGTAG...TACATGGAGTCGTGAAGATAAATTCTGATCACACCGCATTCTGGTCATCATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409861.5
CDS-3UTR CCA 90 bp GGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACTACCTCCATGTAATTaGCTGTGGCAGCCCCATACC +
Preference number: 4 (lower is better)
Translates to: GSYPHSLFQSGFSHLWLLLPPCN*LWQPHT
Trigger: GGTATGGGGCTGCCACAGCCAATTACATGGAGGTAG...TAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CCA 90 bp GCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGCCCATCACTGGTCGCTaGGTCAAGAAGTCCCATGCT +
Preference number: 4 (lower is better)
Translates to: AIHIHYFRVVSVISGCYMPITGR*VKKSHA
Trigger: AGCATGGGACTTCTTGACCCAGCGACCAGTGATGGG...CATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CCA 90 bp CTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGGCCCATCACTGGTCGCTaGGTCAAGAAGTCCCATGCT +
Preference number: 4 (lower is better)
Translates to: LSTFIISEWFQSSLVVTWPITGR*VKKSHA
Trigger: AGCATGGGACTTCTTGACCCAGCGACCAGTGATGGG...CCATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR TCA 90 bp TTTGTTGGCTGTGGATTTACTGCCCAGACTCACAATCCTCCACAACTACGGTCCCTGGTTGTTACATGGTaGTTTGTCGTTTCTATGTTT +
Preference number: 4 (lower is better)
Translates to: FVGCGFTAQTHNPPQLRSLVVTW*FVVSMF
Trigger: AAACATAGAAACGACAAATCACCATGTAACAACCAG...GGACCGTAGTTGTGGAGGATTGTGAGTCTGGGCAGTAAATCCACAGCCAACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540309.5
CDS-3UTR TCA 90 bp GGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTAGGAGGAAGATGGGGCTaGGAAATCTCCAGAAACACT +
Preference number: 4 (lower is better)
Translates to: GSYPHSLFQSGFSHLWLLGGRWG*EISRNT
Trigger: AGTGTTTCTGGAGATTTCTCAGCCCCATCTTCCTCC...TAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR TCA 90 bp AAAAAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTAACAACGCACATGCCTaGCTCATAGCAGTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: KKAAIHIHYFRVVSVISGNNAHA*LIAVWW
Trigger: CCACCACACTGCTATGAGTCAGGCATGTGCGTTGTT...ACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409125.8
ENST00000409674.5
CDS-3UTR GCA 90 bp TGCCACCAAAATGTAGCAAAAGCATCCCAAACTGCATTACTTGTTAAATTCAATGGCGGCAAGATGCTGTaGCACCTCGCTTTCAAGTCC +
Preference number: 4 (lower is better)
Translates to: CHQNVAKASQTALLVKFNGGKML*HLAFKS
Trigger: GGACTTGAAAGCGAGGTGGCACAGCATCTTGCCGCC...ATTGAATTTAACAAGTAATGCAGTTTGGGATGCTTTTGCTACATTTTGGTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR GCA 90 bp GGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTATGGCTGTGGATTTACTaGCCAGACTCACAATCCTCC +
Preference number: 4 (lower is better)
Translates to: GSYPHSLFQSGFSHLWLLWLWIY*PDSQSS
Trigger: GGAGGATTGTGAGTCTGGGCAGTAAATCCACAGCCA...TAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR GCA 90 bp AGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTTGGCTGTGGATTTACTaGCCAGACTCACAATCCTCC +
Preference number: 4 (lower is better)
Translates to: RQLSTFIISEWFQSSLVVWLWIY*PDSQSS
Trigger: GGAGGATTGTGAGTCTGGGCAGTAAATCCACAGCCA...AACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CCA 90 bp ACAGAGAGAGAGAGCACAAATGTACCATATTGTGTATATCATCTGGGATATTTTCCAAGCTCCAGGGGGTaGAATGCTGAGCACAGGTTC +
Preference number: 4 (lower is better)
Translates to: TERESTNVPYCVYHLGYFPSSRG*NAEHRF
Trigger: GAACCTGTGCTCAGCATTCCACCCCCTGGAGCTTGG...AAAATATCCCAGATGATATACACAATATGGTACATTTGTGCTCTCTCTCTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310454.10
CDS-3UTR CCA 90 bp GCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGCTACCTCCATGTAATTaGCTGTGGCAGCCCCATACC +
Preference number: 4 (lower is better)
Translates to: AIHIHYFRVVSVISGCYMLPPCN*LWQPHT
Trigger: GGTATGGGGCTGCCACAGCCAATTACATGGAGGTAG...CATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CCA 90 bp AGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATCCCATCACTGGTCGCTaGGTCAAGAAGTCCCATGCT +
Preference number: 4 (lower is better)
Translates to: SYPHSLFQSGFSHLWLLHPITGR*VKKSHA
Trigger: AGCATGGGACTTCTTGACCCAGCGACCAGTGATGGG...ATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR TCA 90 bp CACAGTGATACCTGGGAGCATCACTTGCTCTGTTTTAGGATTTCCCTTAGGAAGCTTATCTTATACCTGTaGTTCTGGAAGCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: HSDTWEHHLLCFRISLRKLILYL*FWKLSE
Trigger: CTCTGAAAGCTTCCAGAATCACAGGTATAAGATAAG...CTTCCTAAGGGAAATCCTAAAACAGAGCAAGTGATGCTCCCAGGTATCACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR TCA 90 bp TACAGAAGGGGAAAGACTTTAAGCAACCATGATGACCTTGGAAACTGGTTATGTGAGTGCGTAGGTGAGTaGACCTCCAGTGTTTACATT +
Preference number: 4 (lower is better)
Translates to: YRRGKTLSNHDDLGNWLCECVGE*TSSVYI
Trigger: AATGTAAACACTGGAGGTTCACTCACCTACGCACTC...ACATAACCAGTTTCCAAGGTCATCATGGTTGCTTAAAGTCTTTCCCCTTCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR TCA 90 bp TACAGAAGGGGAAAGACTTTAAGCAACCATGATGACCTTGGAAACTGGTTATGTAGCAAAGCCAGAAACTaGAGCAGGATAGAGAGCATG +
Preference number: 4 (lower is better)
Translates to: YRRGKTLSNHDDLGNWLCSKARN*SRIESM
Trigger: CATGCTCTCTATCCTGCTTCAGTTTCTGGCTTTGCT...ACATAACCAGTTTCCAAGGTCATCATGGTTGCTTAAAGTCTTTCCCCTTCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR GCA 90 bp AGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGATTCCACTCCATGCTaGCAGGACATCCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SYPHSLFQSGFSHLWLLHDSTPC*QDIPSS
Trigger: AGAAGAGGGGATGTCCTGGCAGCATGGAGTGGAATC...ATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
CDS-3UTR GCA 90 bp ACAGAGAGAGAGAGCACAAATGTACCATATTGTGTATATCATCTGGGATATTTTACGGATTCCACTCCATaGTGCCAGGACATCCCCTCT +
Preference number: 4 (lower is better)
Translates to: TERESTNVPYCVYHLGYFTDSTP*CQDIPS
Trigger: AGAGGGGATGTCCTGGCAGCATGGAGTGGAATCCGT...AAAATATCCCAGATGATATACACAATATGGTACATTTGTGCTCTCTCTCTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR GCA 90 bp AAAAAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGGCTGTGGATTTACTaGCCAGACTCACAATCCTCC +
Preference number: 4 (lower is better)
Translates to: KKAAIHIHYFRVVSVISGWLWIY*PDSQSS
Trigger: GGAGGATTGTGAGTCTGGGCAGTAAATCCACAGCCA...ACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR GCA 90 bp TACAGAAGGGGAAAGACTTTAAGCAACCATGATGACCTTGGAAACTGGTTATGTCCTGGGAGCATCACTTaGTCTGTTTTAGGATTTCCC +
Preference number: 4 (lower is better)
Translates to: YRRGKTLSNHDDLGNWLCPGSIT*SVLGFP
Trigger: GGGAAATCCTAAAACAGAGCAAGTGATGCTCCCAGG...ACATAACCAGTTTCCAAGGTCATCATGGTTGCTTAAAGTCTTTCCCCTTCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR GCA 90 bp CCCTTGGAAAGTCTTTGTGTGCCCCCGTTTGAAGACCACTGCTTTAAAACACTGCCGTTTGAAGACCACTaGTTTAAAACACTGATAGTT +
Preference number: 4 (lower is better)
Translates to: PLESLCVPPFEDHCFKTLPFEDH*FKTLIV
Trigger: AACTATCAGTGTTTTAAAGCAGTGGTCTTCAAACGG...CAGTGTTTTAAAGCAGTGGTCTTCAAACGGGGGCACACAAAGACTTTCCAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409861.5
CDS-3UTR CCA 90 bp TACAGAAGGGGAAAGACTTTAAGCAACCATGATGACCTTGGAAACTGGTTATGTCAATTTCTAGCAGGTTaGCACGCTCATGAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: YRRGKTLSNHDDLGNWLCQFLAG*HAHEGL
Trigger: AAGCCCTTCATGAGCGTGCCAACCTGCTAGAAATTG...ACATAACCAGTTTCCAAGGTCATCATGGTTGCTTAAAGTCTTTCCCCTTCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CCA 90 bp AGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATCTACCTCCATGTAATTaGCTGTGGCAGCCCCATACC +
Preference number: 4 (lower is better)
Translates to: SYPHSLFQSGFSHLWLLHLPPCN*LWQPHT
Trigger: GGTATGGGGCTGCCACAGCCAATTACATGGAGGTAG...ATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CCA 90 bp AAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTAAGTCCCATGCTCTCTaGGCTGTAATAACCAGGCAT +
Preference number: 4 (lower is better)
Translates to: KAAIHIHYFRVVSVISGCKSHAL*AVITRH
Trigger: ATGCCTGGTTATTACAGCCCAGAGAGCATGGGACTT...ACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CCA 90 bp TACAGAAGGGGAAAGACTTTAAGCAACCATGATGACCTTGGAAACTGGTTATGTGTTCACAGTGATACCTaGGAGCATCACTTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: YRRGKTLSNHDDLGNWLCVHSDT*EHHLLC
Trigger: ACAGAGCAAGTGATGCTCCCAGGTATCACTGTGAAC...ACATAACCAGTTTCCAAGGTCATCATGGTTGCTTAAAGTCTTTCCCCTTCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CCA 90 bp AGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTGTTCACAGTGATACCTaGGAGCATCACTTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: RQLSTFIISEWFQSSLVVVHSDT*EHHLLC
Trigger: ACAGAGCAAGTGATGCTCCCAGGTATCACTGTGAAC...AACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CCA 90 bp CGTAGTTCTCTTCTTAAAGTTTTACAGTTTCTTAAGTCGATTCCGCTGACCCTCCTCATAGCAGTGTGGTaGTCCCTAGGATATGAGTGT +
Preference number: 4 (lower is better)
Translates to: RSSLLKVLQFLKSIPLTLLIAVW*SLGYEC
Trigger: ACACTCATATCCTAGGGACCACCACACTGCTATGAG...GAGGGTCAGCGGAATCGACTTAAGAAACTGTAAAACTTTAAGAAGAGAACTACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416888.5
CDS-3UTR TCA 90 bp AGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGGAGGAAGATGGGGCTaGGAAATCTCCAGAAACACT +
Preference number: 4 (lower is better)
Translates to: SYPHSLFQSGFSHLWLLHGGRWG*EISRNT
Trigger: AGTGTTTCTGGAGATTTCTCAGCCCCATCTTCCTCC...ATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR TCA 90 bp CTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGGAGCAAAGCCAGAAACTaGAGCAGGATAGAGAGCATG +
Preference number: 4 (lower is better)
Translates to: LSTFIISEWFQSSLVVTWSKARN*SRIESM
Trigger: CATGCTCTCTATCCTGCTTCAGTTTCTGGCTTTGCT...CCATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR TCA 90 bp GTAATGATGACCAGAATGCGGTGTGATCAGAATTTATCTTCACGACTCCATGTAGACCAGAATGCGGTGTaGTCAGAATTTATCTTCACG +
Preference number: 4 (lower is better)
Translates to: VMMTRMRCDQNLSSRLHVDQNAV*SEFIFT
Trigger: CGTGAAGATAAATTCTGATCACACCGCATTCTGGTC...TACATGGAGTCGTGAAGATAAATTCTGATCACACCGCATTCTGGTCATCATTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409861.5
CDS-3UTR GCA 90 bp TGCCACCAAAATGTAGCAAAAGCATCCCAAACTGCATTACTTGTTAAATTCAATGATTCCACTCCATGCTaGCAGGACATCCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: CHQNVAKASQTALLVKFNDSTPC*QDIPSS
Trigger: AGAAGAGGGGATGTCCTGGCAGCATGGAGTGGAATC...ATTGAATTTAACAAGTAATGCAGTTTGGGATGCTTTTGCTACATTTTGGTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR GCA 90 bp CCCTTGGAAAGTCTTTGTGTGCCCCCGTTTGAAGACCACTGCTTTAAAACACTGCCCATATTTCACCTCTaGTTCAATATATGGAAATTC +
Preference number: 4 (lower is better)
Translates to: PLESLCVPPFEDHCFKTLPIFHL*FNIWKF
Trigger: GAATTTCCATATATTGAAGCAGAGGTGAAATATGGG...CAGTGTTTTAAAGCAGTGGTCTTCAAACGGGGGCACACAAAGACTTTCCAAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409861.5
CDS-3UTR GCA 90 bp GCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGCCTGGGAGCATCACTTaGTCTGTTTTAGGATTTCCC +
Preference number: 4 (lower is better)
Translates to: AIHIHYFRVVSVISGCYMPGSIT*SVLGFP
Trigger: GGGAAATCCTAAAACAGAGCAAGTGATGCTCCCAGG...CATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR GCA 90 bp AAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTCTTAAACAACGCACATaGCTGACTCATAGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: KAAIHIHYFRVVSVISGCLKQRT*LTHSSV
Trigger: CACACTGCTATGAGTCAGGCATGTGCGTTGTTTAAG...ACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409125.8
ENST00000409674.5
CDS-3UTR GCA 90 bp CACAGGCGTAGTTCTCTTCTTAAAGTTTTACAGTTTCTTAAGTCGATTCCGCTGCTTAAACAACGCACATaGCTGACTCATAGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: HRRSSLLKVLQFLKSIPLLKQRT*LTHSSV
Trigger: CACACTGCTATGAGTCAGGCATGTGCGTTGTTTAAG...CAGCGGAATCGACTTAAGAAACTGTAAAACTTTAAGAAGAGAACTACGCCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416888.5
CDS-3UTR CCA 90 bp AAAAAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTAAGTCCCATGCTCTCTaGGCTGTAATAACCAGGCAT +
Preference number: 4 (lower is better)
Translates to: KKAAIHIHYFRVVSVISGKSHAL*AVITRH
Trigger: ATGCCTGGTTATTACAGCCCAGAGAGCATGGGACTT...ACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CCA 90 bp AAAAAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTCTCATAGCAGTGTGGTaGTCCCTAGGATATGAGTGT +
Preference number: 4 (lower is better)
Translates to: KKAAIHIHYFRVVSVISGLIAVW*SLGYEC
Trigger: ACACTCATATCCTAGGGACCACCACACTGCTATGAG...ACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409125.8
ENST00000409674.5
CDS-3UTR CCA 90 bp GCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGCTCATAGCAGTGTGGTaGTCCCTAGGATATGAGTGT +
Preference number: 4 (lower is better)
Translates to: AIHIHYFRVVSVISGCYMLIAVW*SLGYEC
Trigger: ACACTCATATCCTAGGGACCACCACACTGCTATGAG...CATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409125.8
ENST00000409674.5
CDS-3UTR TCA 90 bp CTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGGCCAGTGTTTACATTGTaGCATACAGGCTCAGAATCC +
Preference number: 4 (lower is better)
Translates to: LSTFIISEWFQSSLVVTWPVFTL*HTGSES
Trigger: GGATTCTGAGCCTGTATGTCACAATGTAAACACTGG...CCATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR TCA 90 bp AGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTAGTCTCTGGGATTGGTaGAGGACTCTACATTTTAGA +
Preference number: 4 (lower is better)
Translates to: RQLSTFIISEWFQSSLVVSLWDW*RTLHFR
Trigger: TCTAAAATGTAGAGTCCTTCACCAATCCCAGAGACT...AACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR GCA 90 bp ACAGAGAGAGAGAGCACAAATGTACCATATTGTGTATATCATCTGGGATATTTTCTCACGTCAAATTCCTaGCCTGTGAGGACATCCTTG +
Preference number: 4 (lower is better)
Translates to: TERESTNVPYCVYHLGYFLTSNS*PVRTSL
Trigger: CAAGGATGTCCTCACAGGGCAGGAATTTGACGTGAG...AAAATATCCCAGATGATATACACAATATGGTACATTTGTGCTCTCTCTCTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR GCA 90 bp ATGGTGATTTGTCGTTTCTATGTTTGTTGGCTGTGGATTTACTGCCCAGACTCACACATGCTATCTGTATaGATGTCACAAAATGTCTCC +
Preference number: 4 (lower is better)
Translates to: MVICRFYVCWLWIYCPDSHMLSV*MSQNVS
Trigger: GGAGACATTTTGTGACATGCATACAGATAGCATGTG...TGAGTCTGGGCAGTAAATCCACAGCCAACAAACATAGAAACGACAAATCACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540309.5
CDS-3UTR GCA 90 bp CTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGGCTTAAACAACGCACATaGCTGACTCATAGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: LSTFIISEWFQSSLVVTWLKQRT*LTHSSV
Trigger: CACACTGCTATGAGTCAGGCATGTGCGTTGTTTAAG...CCATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409125.8
ENST00000409674.5
CDS-3UTR CCA 90 bp TACAGAAGGGGAAAGACTTTAAGCAACCATGATGACCTTGGAAACTGGTTATGTTATGTTTGTTGGCTGTaGATTTACTGCCCAGACTCA +
Preference number: 4 (lower is better)
Translates to: YRRGKTLSNHDDLGNWLCYVCWL*IYCPDS
Trigger: TGAGTCTGGGCAGTAAATCCACAGCCAACAAACATA...ACATAACCAGTTTCCAAGGTCATCATGGTTGCTTAAAGTCTTTCCCCTTCTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CCA 90 bp AAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTATGTTTGTTGGCTGTaGATTTACTGCCCAGACTCA +
Preference number: 4 (lower is better)
Translates to: KAAIHIHYFRVVSVISGCYVCWL*IYCPDS
Trigger: TGAGTCTGGGCAGTAAATCCACAGCCAACAAACATA...ACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CCA 90 bp AAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTCGTTTCTATGTTTGTTaGCTGTGGATTTACTGCCCA +
Preference number: 4 (lower is better)
Translates to: KAAIHIHYFRVVSVISGCRFYVC*LWIYCP
Trigger: TGGGCAGTAAATCCACAGCCAACAAACATAGAAACG...ACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR TCA 90 bp TACAGAAGGGGAAAGACTTTAAGCAACCATGATGACCTTGGAAACTGGTTATGTCATCCATTTGGACATTaGTACTCTCTAATACACGCT +
Preference number: 4 (lower is better)
Translates to: YRRGKTLSNHDDLGNWLCHPFGH*YSLIHA
Trigger: AGCGTGTATTAGAGAGTATCAATGTCCAAATGGATG...ACATAACCAGTTTCCAAGGTCATCATGGTTGCTTAAAGTCTTTCCCCTTCTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR TCA 90 bp GGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATCCATTTGGACATTaGTACTCTCTAATACACGCT +
Preference number: 4 (lower is better)
Translates to: GSYPHSLFQSGFSHLWLLHPFGH*YSLIHA
Trigger: AGCGTGTATTAGAGAGTATCAATGTCCAAATGGATG...TAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR TCA 90 bp AGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTAATGAACTGCTGAGATaGAACTATCACTGTAACTCC +
Preference number: 4 (lower is better)
Translates to: RQLSTFIISEWFQSSLVVNELLR*NYHCNS
Trigger: GGAGTTACAGTGATAGTTTCATCTCAGCAGTTCATT...AACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR TCA 90 bp TGCCACCAAAATGTAGCAAAAGCATCCCAAACTGCATTACTTGTTAAATTCAATGAGTGCGTAGGTGAGTaGACCTCCAGTGTTTACATT +
Preference number: 4 (lower is better)
Translates to: CHQNVAKASQTALLVKFNECVGE*TSSVYI
Trigger: AATGTAAACACTGGAGGTTCACTCACCTACGCACTC...ATTGAATTTAACAAGTAATGCAGTTTGGGATGCTTTTGCTACATTTTGGTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR GCA 90 bp AAAAAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTCCACTTTCCACCTaGTATAGTAATAAGGCCACT +
Preference number: 4 (lower is better)
Translates to: KKAAIHIHYFRVVSVISGCPLST*YSNKAT
Trigger: AGTGGCCTTATTACTATAGCAGGTGGAAAGTGGACA...ACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
CDS-3UTR GCA 90 bp CAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGTCCACTTTCCACCTaGTATAGTAATAAGGCCACT +
Preference number: 4 (lower is better)
Translates to: QLSTFIISEWFQSSLVVTCPLST*YSNKAT
Trigger: AGTGGCCTTATTACTATAGCAGGTGGAAAGTGGACA...TGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
CDS-3UTR GCA 90 bp GGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTAGATGCTGTCTTTCTCTaGAGTTTCTGTTTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: GSYPHSLFQSGFSHLWLLDAVFL*SFCFFQ
Trigger: CTGAAAGAAACAGAAACTGCAGAGAAAGACAGCATC...TAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CCA 90 bp GCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGTATGTTTGTTGGCTGTaGATTTACTGCCCAGACTCA +
Preference number: 4 (lower is better)
Translates to: AIHIHYFRVVSVISGCYMYVCWL*IYCPDS
Trigger: TGAGTCTGGGCAGTAAATCCACAGCCAACAAACATA...CATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CCA 90 bp CTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGGTATGTTTGTTGGCTGTaGATTTACTGCCCAGACTCA +
Preference number: 4 (lower is better)
Translates to: LSTFIISEWFQSSLVVTWYVCWL*IYCPDS
Trigger: TGAGTCTGGGCAGTAAATCCACAGCCAACAAACATA...CCATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CCA 90 bp AAAAAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTCGTTTCTATGTTTGTTaGCTGTGGATTTACTGCCCA +
Preference number: 4 (lower is better)
Translates to: KKAAIHIHYFRVVSVISGRFYVC*LWIYCP
Trigger: TGGGCAGTAAATCCACAGCCAACAAACATAGAAACG...ACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CCA 90 bp AGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTGGTTTCAGTCATCTCTaGTTGTTACATGGTGATTTG +
Preference number: 4 (lower is better)
Translates to: RQLSTFIISEWFQSSLVVGFSHL*LLHGDL
Trigger: CAAATCACCATGTAACAACCAGAGATGACTGAAACC...AACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CCA 90 bp GCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGATTTCCCTTAGGAAGTaGCAAGCGTCTAAAACCTCA +
Preference number: 4 (lower is better)
Translates to: AIHIHYFRVVSVISGCYMISLRK*QASKTS
Trigger: TGAGGTTTTAGACGCTTGCCACTTCCTAAGGGAAAT...CATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR TCA 90 bp AGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTCTGGTTGTTACATGGTaGTTTGTCGTTTCTATGTTT +
Preference number: 4 (lower is better)
Translates to: RQLSTFIISEWFQSSLVVLVVTW*FVVSMF
Trigger: AAACATAGAAACGACAAATCACCATGTAACAACCAG...AACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR TCA 90 bp AAAAAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTAATGAACTGCTGAGATaGAACTATCACTGTAACTCC +
Preference number: 4 (lower is better)
Translates to: KKAAIHIHYFRVVSVISGNELLR*NYHCNS
Trigger: GGAGTTACAGTGATAGTTTCATCTCAGCAGTTCATT...ACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR TCA 90 bp GCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGGGCTCAGAATCCACTTaGATAAGGCATAAAGATACT +
Preference number: 4 (lower is better)
Translates to: AIHIHYFRVVSVISGCYMGSEST*IRHKDT
Trigger: AGTATCTTTATGCCTTATTCAAGTGGATTCTGAGCC...CATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR TCA 90 bp TGCCACCAAAATGTAGCAAAAGCATCCCAAACTGCATTACTTGTTAAATTCAATCCAGTGTTTACATTGTaGCATACAGGCTCAGAATCC +
Preference number: 4 (lower is better)
Translates to: CHQNVAKASQTALLVKFNPVFTL*HTGSES
Trigger: GGATTCTGAGCCTGTATGTCACAATGTAAACACTGG...ATTGAATTTAACAAGTAATGCAGTTTGGGATGCTTTTGCTACATTTTGGTGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR TCA 90 bp GGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTATCAAAAAGGTTGACATaGTGCAAACATCGCAAGTTA +
Preference number: 4 (lower is better)
Translates to: GSYPHSLFQSGFSHLWLLSKRLT*CKHRKL
Trigger: TAACTTGCGATGTTTGCATCATGTCAACCTTTTTGA...TAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR TCA 90 bp GTAATGATGACCAGAATGCGGTGTGATCAGAATTTATCTTCACGACTCCATGTACTCCATGTATCTACTTaGATTAGATTGAACATGCTC +
Preference number: 4 (lower is better)
Translates to: VMMTRMRCDQNLSSRLHVLHVST*IRLNML
Trigger: GAGCATGTTCAATCTAATTCAAGTAGATACATGGAG...TACATGGAGTCGTGAAGATAAATTCTGATCACACCGCATTCTGGTCATCATTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409861.5
CDS-3UTR GCA 90 bp AGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATTGTCCACTTTCCACCTaGTATAGTAATAAGGCCACT +
Preference number: 4 (lower is better)
Translates to: SYPHSLFQSGFSHLWLLHCPLST*YSNKAT
Trigger: AGTGGCCTTATTACTATAGCAGGTGGAAAGTGGACA...ATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
CDS-3UTR GCA 90 bp AAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTCCAGTTAGCCAGTCATaGTCTAGATATAAAAATGTG +
Preference number: 4 (lower is better)
Translates to: KAAIHIHYFRVVSVISGCPVSQS*SRYKNV
Trigger: CACATTTTTATATCTAGAGCATGACTGGCTAACTGG...ACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR GCA 90 bp CAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACAGATGCTGTCTTTCTCTaGAGTTTCTGTTTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: QLSTFIISEWFQSSLVVTDAVFL*SFCFFQ
Trigger: CTGAAAGAAACAGAAACTGCAGAGAAAGACAGCATC...TGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR GCA 90 bp TACAGAAGGGGAAAGACTTTAAGCAACCATGATGACCTTGGAAACTGGTTATGTTGCTCTATAAATGCATaGAGCTCATTCTGTGTATCA +
Preference number: 4 (lower is better)
Translates to: YRRGKTLSNHDDLGNWLCCSINA*SSFCVS
Trigger: TGATACACAGAATGAGCTGCATGCATTTATAGAGCA...ACATAACCAGTTTCCAAGGTCATCATGGTTGCTTAAAGTCTTTCCCCTTCTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CCA 90 bp GCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGGGTTTCAGTCATCTCTaGTTGTTACATGGTGATTTG +
Preference number: 4 (lower is better)
Translates to: AIHIHYFRVVSVISGCYMGFSHL*LLHGDL
Trigger: CAAATCACCATGTAACAACCAGAGATGACTGAAACC...CATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CCA 90 bp CAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACAGGTTTCAGTCATCTCTaGTTGTTACATGGTGATTTG +
Preference number: 4 (lower is better)
Translates to: QLSTFIISEWFQSSLVVTGFSHL*LLHGDL
Trigger: CAAATCACCATGTAACAACCAGAGATGACTGAAACC...TGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CCA 90 bp ATGGTGATTTGTCGTTTCTATGTTTGTTGGCTGTGGATTTACTGCCCAGACTCATTCATTATTTCAGAGTaGTTTCAGTCATCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: MVICRFYVCWLWIYCPDSFIISE*FQSSLV
Trigger: AACCAGAGATGACTGAAACCACTCTGAAATAATGAA...TGAGTCTGGGCAGTAAATCCACAGCCAACAAACATAGAAACGACAAATCACCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540309.5
CDS-3UTR CCA 90 bp CTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGGCTGAGAATATTTCCATaGAGTACAGAAGGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: LSTFIISEWFQSSLVVTWLRIFP*STEGER
Trigger: TCTTTCCCCTTCTGTACTCCATGGAAATATTCTCAG...CCATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CCA 90 bp AAAAAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTCTGAGAATATTTCCATaGAGTACAGAAGGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: KKAAIHIHYFRVVSVISGLRIFP*STEGER
Trigger: TCTTTCCCCTTCTGTACTCCATGGAAATATTCTCAG...ACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
3UTR CAA 72 bp TATACCTGTGATTCTGGAAGCTTTCAGAGTTTCTCTTaGAGACTTGCTCCAGTAACCAGATCTAAACTTTTC +
Preference number: 4 (lower is better)
Translates to: YTCDSGSFQSFS*RLAPVTRSKLF
Trigger: GAAAAGTTTAGATCTGGTTACTGGAGCAAGTCTCAAAGAGAAACTCTGAAAGCTTCCAGAATCACAGGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR TCA 90 bp GCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGCTGGTTGTTACATGGTaGTTTGTCGTTTCTATGTTT +
Preference number: 4 (lower is better)
Translates to: AIHIHYFRVVSVISGCYMLVVTW*FVVSMF
Trigger: AAACATAGAAACGACAAATCACCATGTAACAACCAG...CATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR TCA 90 bp CTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGGCTGGTTGTTACATGGTaGTTTGTCGTTTCTATGTTT +
Preference number: 4 (lower is better)
Translates to: LSTFIISEWFQSSLVVTWLVVTW*FVVSMF
Trigger: AAACATAGAAACGACAAATCACCATGTAACAACCAG...CCATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR TCA 90 bp ATGTCAATGCTATCCTTATCTTATACCTGTGATTCTGGAAGCTTTCAGAGTTTCCTTATCTTATACCTGTaGTTCTGGAAGCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: MSMLSLSYTCDSGSFQSFLILYL*FWKLSE
Trigger: CTCTGAAAGCTTCCAGAATCACAGGTATAAGATAAG...GAAACTCTGAAAGCTTCCAGAATCACAGGTATAAGATAAGGATAGCATTGACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR TCA 90 bp ACAGAGAGAGAGAGCACAAATGTACCATATTGTGTATATCATCTGGGATATTTTAGTCTCTGGGATTGGTaGAGGACTCTACATTTTAGA +
Preference number: 4 (lower is better)
Translates to: TERESTNVPYCVYHLGYFSLWDW*RTLHFR
Trigger: TCTAAAATGTAGAGTCCTTCACCAATCCCAGAGACT...AAAATATCCCAGATGATATACACAATATGGTACATTTGTGCTCTCTCTCTCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR GCA 90 bp GGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTATTTACCATCCTATACTaGTCAATATCCAACTTCATG +
Preference number: 4 (lower is better)
Translates to: GSYPHSLFQSGFSHLWLLFTILY*SISNFM
Trigger: CATGAAGTTGGATATTGAGCAGTATAGGATGGTAAA...TAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR GCA 90 bp GTAATGATGACCAGAATGCGGTGTGATCAGAATTTATCTTCACGACTCCATGTATTTACCATCCTATACTaGTCAATATCCAACTTCATG +
Preference number: 4 (lower is better)
Translates to: VMMTRMRCDQNLSSRLHVFTILY*SISNFM
Trigger: CATGAAGTTGGATATTGAGCAGTATAGGATGGTAAA...TACATGGAGTCGTGAAGATAAATTCTGATCACACCGCATTCTGGTCATCATTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409861.5
CDS-3UTR GCA 90 bp AGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTTTTACCATCCTATACTaGTCAATATCCAACTTCATG +
Preference number: 4 (lower is better)
Translates to: RQLSTFIISEWFQSSLVVFTILY*SISNFM
Trigger: CATGAAGTTGGATATTGAGCAGTATAGGATGGTAAA...AACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR GCA 90 bp GGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACCCATATTTCACCTCTaGTTCAATATATGGAAATTC +
Preference number: 4 (lower is better)
Translates to: GSYPHSLFQSGFSHLWLLPIFHL*FNIWKF
Trigger: GAATTTCCATATATTGAAGCAGAGGTGAAATATGGG...TAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
CDS-3UTR GCA 90 bp GGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTAATAGCACTCATCAGCTaGAAAAATTCATTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: GSYPHSLFQSGFSHLWLLIALIS*KNSLSS
Trigger: TGAACTCAATGAATTTTTGCAGCTGATGAGTGCTAT...TAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR GCA 90 bp GTAATGATGACCAGAATGCGGTGTGATCAGAATTTATCTTCACGACTCCATGTAATAGCACTCATCAGCTaGAAAAATTCATTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: VMMTRMRCDQNLSSRLHVIALIS*KNSLSS
Trigger: TGAACTCAATGAATTTTTGCAGCTGATGAGTGCTAT...TACATGGAGTCGTGAAGATAAATTCTGATCACACCGCATTCTGGTCATCATTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409861.5
CDS-3UTR GCA 90 bp AAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTATAGCACTCATCAGCTaGAAAAATTCATTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: KAAIHIHYFRVVSVISGCIALIS*KNSLSS
Trigger: TGAACTCAATGAATTTTTGCAGCTGATGAGTGCTAT...ACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR GCA 90 bp ATGTCAATGCTATCCTTATCTTATACCTGTGATTCTGGAAGCTTTCAGAGTTTCCACATGCTATCTGTATaGATGTCACAAAATGTCTCC +
Preference number: 4 (lower is better)
Translates to: MSMLSLSYTCDSGSFQSFHMLSV*MSQNVS
Trigger: GGAGACATTTTGTGACATGCATACAGATAGCATGTG...GAAACTCTGAAAGCTTCCAGAATCACAGGTATAAGATAAGGATAGCATTGACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR GCA 90 bp AGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATCACATGCTATCTGTATaGATGTCACAAAATGTCTCC +
Preference number: 4 (lower is better)
Translates to: SYPHSLFQSGFSHLWLLHHMLSV*MSQNVS
Trigger: GGAGACATTTTGTGACATGCATACAGATAGCATGTG...ATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310454.10
ENST00000438166.7
ENST00000540309.5
CDS-3UTR GCA 90 bp GCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGCCCAGCAAATGTCAATaGTATCCTTATCTTATACCT +
Preference number: 4 (lower is better)
Translates to: AIHIHYFRVVSVISGCYMPSKCQ*YPYLIP
Trigger: AGGTATAAGATAAGGATAGCATTGACATTTGCTGGG...CATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CCA 90 bp ACAGAGAGAGAGAGCACAAATGTACCATATTGTGTATATCATCTGGGATATTTTTATGTTTGTTGGCTGTaGATTTACTGCCCAGACTCA +
Preference number: 4 (lower is better)
Translates to: TERESTNVPYCVYHLGYFYVCWL*IYCPDS
Trigger: TGAGTCTGGGCAGTAAATCCACAGCCAACAAACATA...AAAATATCCCAGATGATATACACAATATGGTACATTTGTGCTCTCTCTCTCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CCA 90 bp AGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGGTTTCAGTCATCTCTaGTTGTTACATGGTGATTTG +
Preference number: 4 (lower is better)
Translates to: SYPHSLFQSGFSHLWLLHGFSHL*LLHGDL
Trigger: CAAATCACCATGTAACAACCAGAGATGACTGAAACC...ATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CCA 90 bp CTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGGGATGACCTTGGAAACTaGTTATGTGCCTTATTTAAC +
Preference number: 4 (lower is better)
Translates to: LSTFIISEWFQSSLVVTWDDLGN*LCALFN
Trigger: GTTAAATAAGGCACATAACCAGTTTCCAAGGTCATC...CCATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CCA 90 bp TGCCACCAAAATGTAGCAAAAGCATCCCAAACTGCATTACTTGTTAAATTCAATATTTCCCTTAGGAAGTaGCAAGCGTCTAAAACCTCA +
Preference number: 4 (lower is better)
Translates to: CHQNVAKASQTALLVKFNISLRK*QASKTS
Trigger: TGAGGTTTTAGACGCTTGCCACTTCCTAAGGGAAAT...ATTGAATTTAACAAGTAATGCAGTTTGGGATGCTTTTGCTACATTTTGGTGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR GCA 90 bp GCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGTTTACCATCCTATACTaGTCAATATCCAACTTCATG +
Preference number: 4 (lower is better)
Translates to: AIHIHYFRVVSVISGCYMFTILY*SISNFM
Trigger: CATGAAGTTGGATATTGAGCAGTATAGGATGGTAAA...CATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR GCA 90 bp GCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGCCCATATTTCACCTCTaGTTCAATATATGGAAATTC +
Preference number: 4 (lower is better)
Translates to: AIHIHYFRVVSVISGCYMPIFHL*FNIWKF
Trigger: GAATTTCCATATATTGAAGCAGAGGTGAAATATGGG...CATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
CDS-3UTR GCA 90 bp AAAAAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTCCCATATTTCACCTCTaGTTCAATATATGGAAATTC +
Preference number: 4 (lower is better)
Translates to: KKAAIHIHYFRVVSVISGPIFHL*FNIWKF
Trigger: GAATTTCCATATATTGAAGCAGAGGTGAAATATGGG...ACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
CDS-3UTR GCA 90 bp AAAAAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTATAGCACTCATCAGCTaGAAAAATTCATTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: KKAAIHIHYFRVVSVISGIALIS*KNSLSS
Trigger: TGAACTCAATGAATTTTTGCAGCTGATGAGTGCTAT...ACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR GCA 90 bp ATGTCAATGCTATCCTTATCTTATACCTGTGATTCTGGAAGCTTTCAGAGTTTCCCCAGCAAATGTCAATaGTATCCTTATCTTATACCT +
Preference number: 4 (lower is better)
Translates to: MSMLSLSYTCDSGSFQSFPSKCQ*YPYLIP
Trigger: AGGTATAAGATAAGGATAGCATTGACATTTGCTGGG...GAAACTCTGAAAGCTTCCAGAATCACAGGTATAAGATAAGGATAGCATTGACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR GCA 90 bp ATGTCAATGCTATCCTTATCTTATACCTGTGATTCTGGAAGCTTTCAGAGTTTCCAAAATGAGCTAAGATaGTGTCTTTCTCTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: MSMLSLSYTCDSGSFQSFQNELR*CLSLQF
Trigger: AAACTGCAGAGAAAGACAGCATCTTAGCTCATTTTG...GAAACTCTGAAAGCTTCCAGAATCACAGGTATAAGATAAGGATAGCATTGACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR GCA 90 bp CAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATTATTGCTCTATAAATaGATGCAGCTCATTCTGTGT +
Preference number: 4 (lower is better)
Translates to: QLSTFIISEWFQSSLVVTLLLYK*MQLILC
Trigger: ACACAGAATGAGCTGCATGCATTTATAGAGCAATAA...TGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CCA 90 bp AAAAAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTTCATTATTTCAGAGTaGTTTCAGTCATCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: KKAAIHIHYFRVVSVISGFIISE*FQSSLV
Trigger: AACCAGAGATGACTGAAACCACTCTGAAATAATGAA...ACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CCA 90 bp GCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGCCTATTAAGTGTCACTaGGTTCTAAACAATGAAACT +
Preference number: 4 (lower is better)
Translates to: AIHIHYFRVVSVISGCYMPIKCH*VLNNET
Trigger: AGTTTCATTGTTTAGAACCCAGTGACACTTAATAGG...CATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR TCA 90 bp TGCCACCAAAATGTAGCAAAAGCATCCCAAACTGCATTACTTGTTAAATTCAATTCAAAAAGGTTGACATaGTGCAAACATCGCAAGTTA +
Preference number: 4 (lower is better)
Translates to: CHQNVAKASQTALLVKFNSKRLT*CKHRKL
Trigger: TAACTTGCGATGTTTGCATCATGTCAACCTTTTTGA...ATTGAATTTAACAAGTAATGCAGTTTGGGATGCTTTTGCTACATTTTGGTGGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR GCA 90 bp ATGTCAATGCTATCCTTATCTTATACCTGTGATTCTGGAAGCTTTCAGAGTTTCCCCATATTTCACCTCTaGTTCAATATATGGAAATTC +
Preference number: 4 (lower is better)
Translates to: MSMLSLSYTCDSGSFQSFPIFHL*FNIWKF
Trigger: GAATTTCCATATATTGAAGCAGAGGTGAAATATGGG...GAAACTCTGAAAGCTTCCAGAATCACAGGTATAAGATAAGGATAGCATTGACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR GCA 90 bp AGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATATAGCACTCATCAGCTaGAAAAATTCATTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: SYPHSLFQSGFSHLWLLHIALIS*KNSLSS
Trigger: TGAACTCAATGAATTTTTGCAGCTGATGAGTGCTAT...ATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR GCA 90 bp ACAGAGAGAGAGAGCACAAATGTACCATATTGTGTATATCATCTGGGATATTTTCCAGTTAGCCAGTCATaGTCTAGATATAAAAATGTG +
Preference number: 4 (lower is better)
Translates to: TERESTNVPYCVYHLGYFPVSQS*SRYKNV
Trigger: CACATTTTTATATCTAGAGCATGACTGGCTAACTGG...AAAATATCCCAGATGATATACACAATATGGTACATTTGTGCTCTCTCTCTCTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CCA 90 bp ATGTCAATGCTATCCTTATCTTATACCTGTGATTCTGGAAGCTTTCAGAGTTTCTTCATTATTTCAGAGTaGTTTCAGTCATCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: MSMLSLSYTCDSGSFQSFFIISE*FQSSLV
Trigger: AACCAGAGATGACTGAAACCACTCTGAAATAATGAA...GAAACTCTGAAAGCTTCCAGAATCACAGGTATAAGATAAGGATAGCATTGACAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CCA 90 bp AGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATTTCATTATTTCAGAGTaGTTTCAGTCATCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: SYPHSLFQSGFSHLWLLHFIISE*FQSSLV
Trigger: AACCAGAGATGACTGAAACCACTCTGAAATAATGAA...ATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CCA 90 bp ACAGAGAGAGAGAGCACAAATGTACCATATTGTGTATATCATCTGGGATATTTTGATGACCTTGGAAACTaGTTATGTGCCTTATTTAAC +
Preference number: 4 (lower is better)
Translates to: TERESTNVPYCVYHLGYFDDLGN*LCALFN
Trigger: GTTAAATAAGGCACATAACCAGTTTCCAAGGTCATC...AAAATATCCCAGATGATATACACAATATGGTACATTTGTGCTCTCTCTCTCTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CCA 90 bp AGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATCCTATTAAGTGTCACTaGGTTCTAAACAATGAAACT +
Preference number: 4 (lower is better)
Translates to: SYPHSLFQSGFSHLWLLHPIKCH*VLNNET
Trigger: AGTTTCATTGTTTAGAACCCAGTGACACTTAATAGG...ATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR GCA 90 bp TGCCACCAAAATGTAGCAAAAGCATCCCAAACTGCATTACTTGTTAAATTCAATATAGCACTCATCAGCTaGAAAAATTCATTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: CHQNVAKASQTALLVKFNIALIS*KNSLSS
Trigger: TGAACTCAATGAATTTTTGCAGCTGATGAGTGCTAT...ATTGAATTTAACAAGTAATGCAGTTTGGGATGCTTTTGCTACATTTTGGTGGCA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR GCA 90 bp ACAGAGAGAGAGAGCACAAATGTACCATATTGTGTATATCATCTGGGATATTTTTTATTGCTCTATAAATaGATGCAGCTCATTCTGTGT +
Preference number: 4 (lower is better)
Translates to: TERESTNVPYCVYHLGYFLLLYK*MQLILC
Trigger: ACACAGAATGAGCTGCATGCATTTATAGAGCAATAA...AAAATATCCCAGATGATATACACAATATGGTACATTTGTGCTCTCTCTCTCTGT
34% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CAA 90 bp CCCTTGGAAAGTCTTTGTGTGCCCCCGTTTGAAGACCACTGCTTTAAAACACTGTGGGGGTCTGTCTTCTaGAGCAAGCTCACTACCTCC +
Preference number: 5 (lower is better)
Translates to: PLESLCVPPFEDHCFKTLWGSVF*SKLTTS
Trigger: GGAGGTAGTGAGCTTGCTCAAGAAGACAGACCCCCA...CAGTGTTTTAAAGCAGTGGTCTTCAAACGGGGGCACACAAAGACTTTCCAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409861.5
CDS-3UTR CAA 90 bp TTGGCTGTGGATTTACTGCCCAGACTCACAATCCTCCACAACTACGGTCCACTGAAAGGTCCCGTGGCATaGATAACACATTTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: LAVDLLPRLTILHNYGPLKGPVA*ITHLAL
Trigger: GAGAGCCAAATGTGTTATCAATGCCACGGGACCTTT...CAGTGGACCGTAGTTGTGGAGGATTGTGAGTCTGGGCAGTAAATCCACAGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540309.5
CDS-3UTR CAA 90 bp TGCCCGGGCCCTACTGTAACAGAATCAGGGAGGGTACAAGTCATCGTTATCTTGCCGTGCATCGTTATGTaGTCCGTCATAGTAGACAAT +
Preference number: 5 (lower is better)
Translates to: CPGPTVTESGRVQVIVILPCIVM*SVIVDN
Trigger: ATTGTCTACTATGACGGACAACATAACGATGCACGG...CAAGATAACGATGACTTGTACCCTCCCTGATTCTGTTACAGTAGGGCCCGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CAA 90 bp CCCTTGGAAAGTCTTTGTGTGCCCCCGTTTGAAGACCACTGCTTTAAAACACTGAAAGGTCCCGTGGCATaGATAACACATTTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: PLESLCVPPFEDHCFKTLKGPVA*ITHLAL
Trigger: GAGAGCCAAATGTGTTATCAATGCCACGGGACCTTT...CAGTGTTTTAAAGCAGTGGTCTTCAAACGGGGGCACACAAAGACTTTCCAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409861.5
CDS-3UTR CAA 90 bp ACAGAGAGAGAGAGCACAAATGTACCATATTGTGTATATCATCTGGGATATTTTCCTGACGACTTCTCGTaGTCCGCCCTGGGATCTGGC +
Preference number: 5 (lower is better)
Translates to: TERESTNVPYCVYHLGYFPDDFS*SALGSG
Trigger: GCCAGATCCCAGGGCGGACAACGAGAAGTCGTCAGG...AAAATATCCCAGATGATATACACAATATGGTACATTTGTGCTCTCTCTCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310454.10
CDS-3UTR CAA 90 bp TACAGAAGGGGAAAGACTTTAAGCAACCATGATGACCTTGGAAACTGGTTATGTTGGGGGTCTGTCTTCTaGAGCAAGCTCACTACCTCC +
Preference number: 5 (lower is better)
Translates to: YRRGKTLSNHDDLGNWLCWGSVF*SKLTTS
Trigger: GGAGGTAGTGAGCTTGCTCAAGAAGACAGACCCCCA...ACATAACCAGTTTCCAAGGTCATCATGGTTGCTTAAAGTCTTTCCCCTTCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CAA 90 bp AAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTGGGGGTCTGTCTTCTaGAGCAAGCTCACTACCTCC +
Preference number: 5 (lower is better)
Translates to: KAAIHIHYFRVVSVISGCWGSVF*SKLTTS
Trigger: GGAGGTAGTGAGCTTGCTCAAGAAGACAGACCCCCA...ACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CAA 90 bp TTTGTTGGCTGTGGATTTACTGCCCAGACTCACAATCCTCCACAACTACGGTCCTCTTTATCATCCATTTaGCGCACAGAGTCCGTGAAA +
Preference number: 5 (lower is better)
Translates to: FVGCGFTAQTHNPPQLRSSLSSI*RTESVK
Trigger: TTTCACGGACTCTGTGCGCAAAATGGATGATAAAGA...GGACCGTAGTTGTGGAGGATTGTGAGTCTGGGCAGTAAATCCACAGCCAACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540309.5
CDS-3UTR CAA 90 bp CCCTTGGAAAGTCTTTGTGTGCCCCCGTTTGAAGACCACTGCTTTAAAACACTGATAGGCCAGGTTCATTaGTTTCCTTCTGTAATGAGC +
Preference number: 5 (lower is better)
Translates to: PLESLCVPPFEDHCFKTLIGQVH*FPSVMS
Trigger: GCTCATTACAGAAGGAAACAAATGAACCTGGCCTAT...CAGTGTTTTAAAGCAGTGGTCTTCAAACGGGGGCACACAAAGACTTTCCAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409861.5
CDS-3UTR CAA 90 bp AAAAAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGGGGGTCTGTCTTCTaGAGCAAGCTCACTACCTCC +
Preference number: 5 (lower is better)
Translates to: KKAAIHIHYFRVVSVISGWGSVF*SKLTTS
Trigger: GGAGGTAGTGAGCTTGCTCAAGAAGACAGACCCCCA...ACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CAA 90 bp GCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGTGGGGGTCTGTCTTCTaGAGCAAGCTCACTACCTCC +
Preference number: 5 (lower is better)
Translates to: AIHIHYFRVVSVISGCYMWGSVF*SKLTTS
Trigger: GGAGGTAGTGAGCTTGCTCAAGAAGACAGACCCCCA...CATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CAA 90 bp CTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGGTGGGGGTCTGTCTTCTaGAGCAAGCTCACTACCTCC +
Preference number: 5 (lower is better)
Translates to: LSTFIISEWFQSSLVVTWWGSVF*SKLTTS
Trigger: GGAGGTAGTGAGCTTGCTCAAGAAGACAGACCCCCA...CCATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CAA 90 bp CCCTTGGAAAGTCTTTGTGTGCCCCCGTTTGAAGACCACTGCTTTAAAACACTGCCTGGCTGTTTCAAGTaGTTCCTGCTTCTTATAATC +
Preference number: 5 (lower is better)
Translates to: PLESLCVPPFEDHCFKTLPGCFK*FLLLII
Trigger: GATTATAAGAAGCAGGAACAACTTGAAACAGCCAGG...CAGTGTTTTAAAGCAGTGGTCTTCAAACGGGGGCACACAAAGACTTTCCAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409861.5
CDS-3UTR CAA 90 bp CACAGTGATACCTGGGAGCATCACTTGCTCTGTTTTAGGATTTCCCTTAGGAAGTCGTTTCTATGTTTGTaGGCTGTGGATTTACTGCCC +
Preference number: 5 (lower is better)
Translates to: HSDTWEHHLLCFRISLRKSFLCL*AVDLLP
Trigger: GGGCAGTAAATCCACAGCCAACAAACATAGAAACGA...CTTCCTAAGGGAAATCCTAAAACAGAGCAAGTGATGCTCCCAGGTATCACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CAA 90 bp AAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTAAAGGTCCCGTGGCATaGATAACACATTTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: KAAIHIHYFRVVSVISGCKGPVA*ITHLAL
Trigger: GAGAGCCAAATGTGTTATCAATGCCACGGGACCTTT...ACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CAA 90 bp CACAGTGATACCTGGGAGCATCACTTGCTCTGTTTTAGGATTTCCCTTAGGAAGGATGGTAAGCTAGATTaGACAATACCACATGCTTCA +
Preference number: 5 (lower is better)
Translates to: HSDTWEHHLLCFRISLRKDGKLD*TIPHAS
Trigger: TGAAGCATGTGGTATTGTCAAATCTAGCTTACCATC...CTTCCTAAGGGAAATCCTAAAACAGAGCAAGTGATGCTCCCAGGTATCACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CAA 90 bp AAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTGCAACCATGATGACCTaGGAAACTGGTTATGTGCCT +
Preference number: 5 (lower is better)
Translates to: KAAIHIHYFRVVSVISGCATMMT*ETGYVP
Trigger: AGGCACATAACCAGTTTCCAAGGTCATCATGGTTGC...ACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CAA 90 bp GTAATGATGACCAGAATGCGGTGTGATCAGAATTTATCTTCACGACTCCATGTACCGTGCATCGTTATGTaGTCCGTCATAGTAGACAAT +
Preference number: 5 (lower is better)
Translates to: VMMTRMRCDQNLSSRLHVPCIVM*SVIVDN
Trigger: ATTGTCTACTATGACGGACAACATAACGATGCACGG...TACATGGAGTCGTGAAGATAAATTCTGATCACACCGCATTCTGGTCATCATTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409861.5
CDS-3UTR CAA 90 bp AAAAAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTAAAGGTCCCGTGGCATaGATAACACATTTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: KKAAIHIHYFRVVSVISGKGPVA*ITHLAL
Trigger: GAGAGCCAAATGTGTTATCAATGCCACGGGACCTTT...ACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CAA 90 bp CTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGGAAAGGTCCCGTGGCATaGATAACACATTTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: LSTFIISEWFQSSLVVTWKGPVA*ITHLAL
Trigger: GAGAGCCAAATGTGTTATCAATGCCACGGGACCTTT...CCATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CAA 90 bp AAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTCGTTTCTATGTTTGTaGGCTGTGGATTTACTGCCC +
Preference number: 5 (lower is better)
Translates to: KAAIHIHYFRVVSVISGCSFLCL*AVDLLP
Trigger: GGGCAGTAAATCCACAGCCAACAAACATAGAAACGA...ACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CAA 90 bp AGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTGTGTCGGGATGGGGGTaGGTGATTATTTTTCCATTT +
Preference number: 5 (lower is better)
Translates to: RQLSTFIISEWFQSSLVVVSGWG*VIIFPF
Trigger: AAATGGAAAAATAATCACCAACCCCCATCCCGACAC...AACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CAA 90 bp GGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTAGTGTCGGGATGGGGGTaGGTGATTATTTTTCCATTT +
Preference number: 5 (lower is better)
Translates to: GSYPHSLFQSGFSHLWLLVSGWG*VIIFPF
Trigger: AAATGGAAAAATAATCACCAACCCCCATCCCGACAC...TAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CAA 90 bp CAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACAACCTGGGAGCATCACTaGCTCTGTTTTAGGATTTCC +
Preference number: 5 (lower is better)
Translates to: QLSTFIISEWFQSSLVVTTWEHH*LCFRIS
Trigger: GGAAATCCTAAAACAGAGCAAGTGATGCTCCCAGGT...TGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CAA 90 bp GTAATGATGACCAGAATGCGGTGTGATCAGAATTTATCTTCACGACTCCATGTATTTGTGTGCCCCCGTTaGAAGACCACTGCTTTAAAA +
Preference number: 5 (lower is better)
Translates to: VMMTRMRCDQNLSSRLHVFVCPR*KTTALK
Trigger: TTTTAAAGCAGTGGTCTTCAAACGGGGGCACACAAA...TACATGGAGTCGTGAAGATAAATTCTGATCACACCGCATTCTGGTCATCATTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409861.5
CDS-3UTR CAA 90 bp GGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTAATAGGCCAGGTTCATTaGTTTCCTTCTGTAATGAGC +
Preference number: 5 (lower is better)
Translates to: GSYPHSLFQSGFSHLWLLIGQVH*FPSVMS
Trigger: GCTCATTACAGAAGGAAACAAATGAACCTGGCCTAT...TAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CAA 90 bp AAAAAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTCCGTGCATCGTTATGTaGTCCGTCATAGTAGACAAT +
Preference number: 5 (lower is better)
Translates to: KKAAIHIHYFRVVSVISGPCIVM*SVIVDN
Trigger: ATTGTCTACTATGACGGACAACATAACGATGCACGG...ACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CAA 90 bp CAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACACCGTGCATCGTTATGTaGTCCGTCATAGTAGACAAT +
Preference number: 5 (lower is better)
Translates to: QLSTFIISEWFQSSLVVTPCIVM*SVIVDN
Trigger: ATTGTCTACTATGACGGACAACATAACGATGCACGG...TGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CAA 90 bp AGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTTCTTTATCATCCATTTaGCGCACAGAGTCCGTGAAA +
Preference number: 5 (lower is better)
Translates to: RQLSTFIISEWFQSSLVVSLSSI*RTESVK
Trigger: TTTCACGGACTCTGTGCGCAAAATGGATGATAAAGA...AACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CAA 90 bp GGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTATCTTTATCATCCATTTaGCGCACAGAGTCCGTGAAA +
Preference number: 5 (lower is better)
Translates to: GSYPHSLFQSGFSHLWLLSLSSI*RTESVK
Trigger: TTTCACGGACTCTGTGCGCAAAATGGATGATAAAGA...TAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CAA 90 bp GTAATGATGACCAGAATGCGGTGTGATCAGAATTTATCTTCACGACTCCATGTATCTTTATCATCCATTTaGCGCACAGAGTCCGTGAAA +
Preference number: 5 (lower is better)
Translates to: VMMTRMRCDQNLSSRLHVSLSSI*RTESVK
Trigger: TTTCACGGACTCTGTGCGCAAAATGGATGATAAAGA...TACATGGAGTCGTGAAGATAAATTCTGATCACACCGCATTCTGGTCATCATTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409861.5
CDS-3UTR CAA 90 bp CAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATCGTTTCTATGTTTGTaGGCTGTGGATTTACTGCCC +
Preference number: 5 (lower is better)
Translates to: QLSTFIISEWFQSSLVVTSFLCL*AVDLLP
Trigger: GGGCAGTAAATCCACAGCCAACAAACATAGAAACGA...TGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CAA 90 bp AGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTTTTCAGAGTTTCTCTTaGAGACTTGCTCCAGTAACC +
Preference number: 5 (lower is better)
Translates to: RQLSTFIISEWFQSSLVVFQSFS*RLAPVT
Trigger: GGTTACTGGAGCAAGTCTCAAAGAGAAACTCTGAAA...AACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CAA 90 bp ATGTCAATGCTATCCTTATCTTATACCTGTGATTCTGGAAGCTTTCAGAGTTTCACCTGGGAGCATCACTaGCTCTGTTTTAGGATTTCC +
Preference number: 5 (lower is better)
Translates to: MSMLSLSYTCDSGSFQSFTWEHH*LCFRIS
Trigger: GGAAATCCTAAAACAGAGCAAGTGATGCTCCCAGGT...GAAACTCTGAAAGCTTCCAGAATCACAGGTATAAGATAAGGATAGCATTGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CAA 90 bp AAAAAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTATAGGCCAGGTTCATTaGTTTCCTTCTGTAATGAGC +
Preference number: 5 (lower is better)
Translates to: KKAAIHIHYFRVVSVISGIGQVH*FPSVMS
Trigger: GCTCATTACAGAAGGAAACAAATGAACCTGGCCTAT...ACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CAA 90 bp CAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACAATAGGCCAGGTTCATTaGTTTCCTTCTGTAATGAGC +
Preference number: 5 (lower is better)
Translates to: QLSTFIISEWFQSSLVVTIGQVH*FPSVMS
Trigger: GCTCATTACAGAAGGAAACAAATGAACCTGGCCTAT...TGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CAA 90 bp AGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATCCGTGCATCGTTATGTaGTCCGTCATAGTAGACAAT +
Preference number: 5 (lower is better)
Translates to: SYPHSLFQSGFSHLWLLHPCIVM*SVIVDN
Trigger: ATTGTCTACTATGACGGACAACATAACGATGCACGG...ATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CAA 90 bp ACAGAGAGAGAGAGCACAAATGTACCATATTGTGTATATCATCTGGGATATTTTAAAGGTCCCGTGGCATaGATAACACATTTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: TERESTNVPYCVYHLGYFKGPVA*ITHLAL
Trigger: GAGAGCCAAATGTGTTATCAATGCCACGGGACCTTT...AAAATATCCCAGATGATATACACAATATGGTACATTTGTGCTCTCTCTCTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CAA 90 bp AAAAAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTCTTTATCATCCATTTaGCGCACAGAGTCCGTGAAA +
Preference number: 5 (lower is better)
Translates to: KKAAIHIHYFRVVSVISGSLSSI*RTESVK
Trigger: TTTCACGGACTCTGTGCGCAAAATGGATGATAAAGA...ACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CAA 90 bp AAAAAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTCCTGGCTGTTTCAAGTaGTTCCTGCTTCTTATAATC +
Preference number: 5 (lower is better)
Translates to: KKAAIHIHYFRVVSVISGPGCFK*FLLLII
Trigger: GATTATAAGAAGCAGGAACAACTTGAAACAGCCAGG...ACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
CDS-3UTR CAA 90 bp CAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACACCTGGCTGTTTCAAGTaGTTCCTGCTTCTTATAATC +
Preference number: 5 (lower is better)
Translates to: QLSTFIISEWFQSSLVVTPGCFK*FLLLII
Trigger: GATTATAAGAAGCAGGAACAACTTGAAACAGCCAGG...TGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
CDS-3UTR CAA 90 bp TGCCACCAAAATGTAGCAAAAGCATCCCAAACTGCATTACTTGTTAAATTCAATGCAACCATGATGACCTaGGAAACTGGTTATGTGCCT +
Preference number: 5 (lower is better)
Translates to: CHQNVAKASQTALLVKFNATMMT*ETGYVP
Trigger: AGGCACATAACCAGTTTCCAAGGTCATCATGGTTGC...ATTGAATTTAACAAGTAATGCAGTTTGGGATGCTTTTGCTACATTTTGGTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CAA 90 bp AAAAAGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTATTGAGTCTCTGGGATaGGTGAAGGACTCTACATTT +
Preference number: 5 (lower is better)
Translates to: KKAAIHIHYFRVVSVISGIESLG*VKDSTF
Trigger: AAATGTAGAGTCCTTCACCAATCCCAGAGACTCAAT...ACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CAA 90 bp AGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATCCTGGCTGTTTCAAGTaGTTCCTGCTTCTTATAATC +
Preference number: 5 (lower is better)
Translates to: SYPHSLFQSGFSHLWLLHPGCFK*FLLLII
Trigger: GATTATAAGAAGCAGGAACAACTTGAAACAGCCAGG...ATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
CDS-3UTR CAA 90 bp CTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGGTTGTCGTTTCTATGTTaGTTGGCTGTGGATTTACTG +
Preference number: 5 (lower is better)
Translates to: LSTFIISEWFQSSLVVTWLSFLC*LAVDLL
Trigger: CAGTAAATCCACAGCCAACAAACATAGAAACGACAA...CCATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CAA 90 bp GCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGTTGTCGTTTCTATGTTaGTTGGCTGTGGATTTACTG +
Preference number: 5 (lower is better)
Translates to: AIHIHYFRVVSVISGCYMLSFLC*LAVDLL
Trigger: CAGTAAATCCACAGCCAACAAACATAGAAACGACAA...CATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310454.10
ENST00000409125.8
ENST00000409674.5
ENST00000438166.7
ENST00000540309.5
CDS-3UTR CAA 90 bp AGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATTTTCAGAGTTTCTCTTaGAGACTTGCTCCAGTAACC +
Preference number: 5 (lower is better)
Translates to: SYPHSLFQSGFSHLWLLHFQSFS*RLAPVT
Trigger: GGTTACTGGAGCAAGTCTCAAAGAGAAACTCTGAAA...ATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CAA 90 bp AGGCAGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTCCTATTACATCCAAATaGCCACTTAAATGCTGGTTT +
Preference number: 5 (lower is better)
Translates to: RQLSTFIISEWFQSSLVVPITSK*PLKCWF
Trigger: AAACCAGCATTTAAGTGGCAATTTGGATGTAATAGG...AACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CAA 90 bp GCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGGATGGTAAGCTAGATTaGACAATACCACATGCTTCA +
Preference number: 5 (lower is better)
Translates to: AIHIHYFRVVSVISGCYMDGKLD*TIPHAS
Trigger: TGAAGCATGTGGTATTGTCAAATCTAGCTTACCATC...CATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CAA 90 bp GCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATGCCTATTACATCCAAATaGCCACTTAAATGCTGGTTT +
Preference number: 5 (lower is better)
Translates to: AIHIHYFRVVSVISGCYMPITSK*PLKCWF
Trigger: AAACCAGCATTTAAGTGGCAATTTGGATGTAATAGG...CATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CAA 90 bp ACAGAGAGAGAGAGCACAAATGTACCATATTGTGTATATCATCTGGGATATTTTTTGTCGTTTCTATGTTaGTTGGCTGTGGATTTACTG +
Preference number: 5 (lower is better)
Translates to: TERESTNVPYCVYHLGYFLSFLC*LAVDLL
Trigger: CAGTAAATCCACAGCCAACAAACATAGAAACGACAA...AAAATATCCCAGATGATATACACAATATGGTACATTTGTGCTCTCTCTCTCTGT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CAA 90 bp ATGTCAATGCTATCCTTATCTTATACCTGTGATTCTGGAAGCTTTCAGAGTTTCAATGTGGAATATTGTTaGCATGAGGAAGGTAGACAA +
Preference number: 5 (lower is better)
Translates to: MSMLSLSYTCDSGSFQSFNVEYC*HEEGRQ
Trigger: TTGTCTACCTTCCTCATGCAAACAATATTCCACATT...GAAACTCTGAAAGCTTCCAGAATCACAGGTATAAGATAAGGATAGCATTGACAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS-3UTR CAA 90 bp AGCTATCCACATTCATTATTTCAGAGTGGTTTCAGTCATCTCTGGTTGTTACATAATGTGGAATATTGTTaGCATGAGGAAGGTAGACAA +
Preference number: 5 (lower is better)
Translates to: SYPHSLFQSGFSHLWLLHNVEYC*HEEGRQ
Trigger: TTGTCTACCTTCCTCATGCAAACAATATTCCACATT...ATGTAACAACCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310454.10
ENST00000438166.7
CDS TCA 72 bp GGGAAGACCAAGCCCAAGCTCCAGGGGGTGGAATGCTaGGCACAGGTTCCCCAGACCCAGCCTCATACAGGT +
Preference number: 6 (lower is better)
Translates to: GKTKPKLQGVEC*AQVPQTQPHTG
Trigger: ACCTGTATGAGGCTGGGTCTGGGGAACCTGTGCTCAGCATTCCACCCCCTGGAGCTTGGGCTTGGTCTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310454.10