RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPC4 (Homo sapiens)

Ensembl gene IDs: ENSG00000076716

Ensembl transcript IDs: ENST00000370828.4

Found 245 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACATGCACAGACAAAAACTTTGCCCGAGTGTTGACAGCTATTCCCTaGGCCCAGGCTGTACCCCAGTTCTGGCTAGCTCTCAGACAGCTC +
Preference number: 1 (lower is better)
Translates to: TCTDKNFARVLTAIP*AQAVPQFWLALRQL
Trigger: GAGCTGTCTGAGAGCTAGCCAGAACTGGGGTACAGCCTGGGCTCAGGGAATAGCTGTCAACACTCGGGCAAAGTTTTTGTCTGTGCATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR GCA 90 bp TCCCCTAAGTGGGCTCCTTGGCTGATATCTTGGATCGTAGCACATTaGTGTGAACCATGGCAAGTCCTTTGTTTTACTGATAAGAGGGGG +
Preference number: 1 (lower is better)
Translates to: SPKWAPWLISWIVAH*CEPWQVLCFTDKRG
Trigger: CCCCCTCTTATCAGTAAAACAAAGGACTTGCCATGGTTCACAGCAATGTGCTACGATCCAAGATATCAGCCAAGGAGCCCACTTAGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR CCA 90 bp AACTATAGTTCTGTACCTACACTGTTAGCCACGTTTAACATGGTTTaGGGGAGCAGGAACCAACTCAATGCACAGTCCCTTTTCCTCCCA +
Preference number: 1 (lower is better)
Translates to: NYSSVPTLLATFNMV*GSRNQLNAQSLFLP
Trigger: TGGGAGGAAAAGGGACTGTGCATTGAGTTGGTTCCTGCTCCCCCAAACCATGTTAAACGTGGCTAACAGTGTAGGTACAGAACTATAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR CCA 90 bp GCTCCTTGGCTGATATCTTGGATCGTAGCACATTGCTGTGAACCATaGCAAGTCCTTTGTTTTACTGATAAGAGGGGGCTAGGTAAGAAA +
Preference number: 1 (lower is better)
Translates to: APWLISWIVAHCCEP*QVLCFTDKRGLGKK
Trigger: TTTCTTACCTAGCCCCCTCTTATCAGTAAAACAAAGGACTTGCCATGGTTCACAGCAATGTGCTACGATCCAAGATATCAGCCAAGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR-3UTR GCA 90 bp GGGGGTGAGCTTGCCAGCTGCTTAGAAGCCAAGAGTTATCCAGTCAGACCTGAATATGGCCATGGCCTTTaGCACTTCACCCACGTGGCT +
Preference number: 2 (lower is better)
Translates to: GGELASCLEAKSYPVRPEYGHGL*HFTHVA
Trigger: AGCCACGTGGGTGAAGTGGCAAAGGCCATGGCCATA...TTCAGGTCTGACTGGATAACTCTTGGCTTCTAAGCAGCTGGCAAGCTCACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR-3UTR CCA 90 bp GGGGGTGAGCTTGCCAGCTGCTTAGAAGCCAAGAGTTATCCAGTCAGACCTGAACTGGGACAACAGATATaGCCATGGCCTTTGCCACTT +
Preference number: 2 (lower is better)
Translates to: GGELASCLEAKSYPVRPELGQQI*PWPLPL
Trigger: AAGTGGCAAAGGCCATGGCCATATCTGTTGTCCCAG...TTCAGGTCTGACTGGATAACTCTTGGCTTCTAAGCAGCTGGCAAGCTCACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR-3UTR CCA 90 bp ACAAGGAAGGGATTCCCAAGGCAGTTGTTAGTCTTTGGCCTGGGACAACAGATAGCCACTTCACCCACGTaGCTAAAGGTCACCACTAAG +
Preference number: 2 (lower is better)
Translates to: TRKGFPRQLLVFGLGQQIATSPT*LKVTTK
Trigger: CTTAGTGGTGACCTTTAGCCACGTGGGTGAAGTGGC...TATCTGTTGTCCCAGGCCAAAGACTAACAACTGCCTTGGGAATCCCTTCCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR CAA 90 bp GAGCTATCATTTGGTAAGGACACAAGGAAGGGATTCCCAAGGCAGTaGTTAGTCTTTGGCCTGGGACAACAGATATGGCCATGGCCTTTG +
Preference number: 2 (lower is better)
Translates to: ELSFGKDTRKGFPRQ*LVFGLGQQIWPWPL
Trigger: CAAAGGCCATGGCCATATCTGTTGTCCCAGGCCAAAGACTAACAACTGCCTTGGGAATCCCTTCCTTGTGTCCTTACCAAATGATAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR-3UTR GCA 90 bp ACAAGGAAGGGATTCCCAAGGCAGTTGTTAGTCTTTGGCCTGGGACAACAGATATGGATCGTAGCACATTaGTGTGAACCATGGCAAGTC +
Preference number: 2 (lower is better)
Translates to: TRKGFPRQLLVFGLGQQIWIVAH*CEPWQV
Trigger: GACTTGCCATGGTTCACAGCAATGTGCTACGATCCA...TATCTGTTGTCCCAGGCCAAAGACTAACAACTGCCTTGGGAATCCCTTCCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR-3UTR CCA 90 bp GGGGGTGAGCTTGCCAGCTGCTTAGAAGCCAAGAGTTATCCAGTCAGACCTGAAAGTGGGTTCAAGAAATaGACCTATAGTGATCTTAGC +
Preference number: 2 (lower is better)
Translates to: GGELASCLEAKSYPVRPESGFKK*TYSDLS
Trigger: GCTAAGATCACTATAGGTCCATTTCTTGAACCCACT...TTCAGGTCTGACTGGATAACTCTTGGCTTCTAAGCAGCTGGCAAGCTCACCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR-3UTR CCA 90 bp GGGGGTGAGCTTGCCAGCTGCTTAGAAGCCAAGAGTTATCCAGTCAGACCTGAACATTGCTGTGAACCATaGCAAGTCCTTTGTTTTACT +
Preference number: 2 (lower is better)
Translates to: GGELASCLEAKSYPVRPEHCCEP*QVLCFT
Trigger: AGTAAAACAAAGGACTTGCCATGGTTCACAGCAATG...TTCAGGTCTGACTGGATAACTCTTGGCTTCTAAGCAGCTGGCAAGCTCACCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR-3UTR GCA 90 bp ACACAAGCCCTTCACATGCTGTTAACTTTGGAAAAGTCAGGTCTTCTCCTAACAAGTGGCTCAGAAGCCTaGTTGTGCCCTCACATTCTG +
Preference number: 2 (lower is better)
Translates to: TQALHMLLTLEKSGLLLTSGSEA*LCPHIL
Trigger: CAGAATGTGAGGGCACAAGCAGGCTTCTGAGCCACT...TGTTAGGAGAAGACCTGACTTTTCCAAAGTTAACAGCATGTGAAGGGCTTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR-3UTR CCA 90 bp GCACATTGCTGTGAACCATGGCAAGTCCTTTGTTTTACTGATAAGAGGGGGCTAACGTTTAACATGGTTTaGGGGAGCAGGAACCAACTC +
Preference number: 2 (lower is better)
Translates to: AHCCEPWQVLCFTDKRGLTFNMV*GSRNQL
Trigger: GAGTTGGTTCCTGCTCCCCCAAACCATGTTAAACGT...TAGCCCCCTCTTATCAGTAAAACAAAGGACTTGCCATGGTTCACAGCAATGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR-3UTR TCA 90 bp ACAAGGAAGGGATTCCCAAGGCAGTTGTTAGTCTTTGGCCTGGGACAACAGATACTTGGATTGATGCTTTaGATACAATCTGACAAGTGG +
Preference number: 2 (lower is better)
Translates to: TRKGFPRQLLVFGLGQQILGLML*IQSDKW
Trigger: CCACTTGTCAGATTGTATTCAAAGCATCAATCCAAG...TATCTGTTGTCCCAGGCCAAAGACTAACAACTGCCTTGGGAATCCCTTCCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR-3UTR GCA 90 bp GCACATTGCTGTGAACCATGGCAAGTCCTTTGTTTTACTGATAAGAGGGGGCTATTCAAAGCAGTAGTCTaGAGTCTCTTCCAACTATCA +
Preference number: 2 (lower is better)
Translates to: AHCCEPWQVLCFTDKRGLFKAVV*SLFQLS
Trigger: TGATAGTTGGAAGAGACTGCAGACTACTGCTTTGAA...TAGCCCCCTCTTATCAGTAAAACAAAGGACTTGCCATGGTTCACAGCAATGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR-3UTR CCA 90 bp ACACAAGCCCTTCACATGCTGTTAACTTTGGAAAAGTCAGGTCTTCTCCTAACAGCCAAGAAGGGACCCTaGTTTGCTTGTAAGAAACAA +
Preference number: 2 (lower is better)
Translates to: TQALHMLLTLEKSGLLLTAKKGP*FACKKQ
Trigger: TTGTTTCTTACAAGCAAACCAGGGTCCCTTCTTGGC...TGTTAGGAGAAGACCTGACTTTTCCAAAGTTAACAGCATGTGAAGGGCTTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR-3UTR TCA 90 bp ACACAAGCCCTTCACATGCTGTTAACTTTGGAAAAGTCAGGTCTTCTCCTAACACCCAATATTCCATTTTaGCCACTCTGCAGAATTTGG +
Preference number: 2 (lower is better)
Translates to: TQALHMLLTLEKSGLLLTPNIPF*PLCRIW
Trigger: CCAAATTCTGCAGAGTGGTCAAAATGGAATATTGGG...TGTTAGGAGAAGACCTGACTTTTCCAAAGTTAACAGCATGTGAAGGGCTTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR-3UTR GCA 90 bp TGCTTTCTATCTTTCAAGGGGGATGATATCCAGAATCTTTTTCTAAATGGGTTATACGTACATGTTACGTaGCAAGAAGGGACCCTGGTT +
Preference number: 2 (lower is better)
Translates to: CFLSFKGDDIQNLFLNGLYVHVT*QEGTLV
Trigger: AACCAGGGTCCCTTCTTGGCACGTAACATGTACGTA...TAACCCATTTAGAAAAAGATTCTGGATATCATCCCCCTTGAAAGATAGAAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR-3UTR TCA 90 bp CCTGAATGCTTTCTATCTTTCAAGGGGGATGATATCCAGAATCTTTTTCTAAATGCTTTGAATACAATCTaGCAAGTGGCTCAGAAGCCT +
Preference number: 2 (lower is better)
Translates to: PECFLSFKGDDIQNLFLNALNTI*QVAQKP
Trigger: AGGCTTCTGAGCCACTTGTCAGATTGTATTCAAAGC...ATTTAGAAAAAGATTCTGGATATCATCCCCCTTGAAAGATAGAAAGCATTCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR-3UTR CCA 90 bp CTAAAAAGGAAATTCCTCACAACTGAGGTAGTTACTAAGTATCAGCACATTTTCATACAATCTGACAAGTaGCTCAGAAGCCTGCTTGTG +
Preference number: 2 (lower is better)
Translates to: LKRKFLTTEVVTKYQHIFIQSDK*LRSLLV
Trigger: CACAAGCAGGCTTCTGAGCCACTTGTCAGATTGTAT...GAAAATGTGCTGATACTTAGTAACTACCTCAGTTGTGAGGAATTTCCTTTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR-3UTR CCA 90 bp AAAGCAGTAGTCTGCAGTCTCTTCCAACTATCACCAATAAATGAAGTACACATACACTTCTTAAACCAGTaGCCACATAGTAAAAACTGT +
Preference number: 2 (lower is better)
Translates to: KAVVCSLFQLSPINEVHIHFLNQ*PHSKNC
Trigger: ACAGTTTTTACTATGTGGCCACTGGTTTAAGAAGTG...TATGTGTACTTCATTTATTGGTGATAGTTGGAAGAGACTGCAGACTACTGCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR-3UTR CCA 90 bp CTAAAAAGGAAATTCCTCACAACTGAGGTAGTTACTAAGTATCAGCACATTTTCCCACTCTGCAGAATTTaGTGTAAAAAGTTGAATGAA +
Preference number: 2 (lower is better)
Translates to: LKRKFLTTEVVTKYQHIFPLCRI*CKKLNE
Trigger: TTCATTCAACTTTTTACACCAAATTCTGCAGAGTGG...GAAAATGTGCTGATACTTAGTAACTACCTCAGTTGTGAGGAATTTCCTTTTTAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR-3UTR CAA 90 bp GGGGGTGAGCTTGCCAGCTGCTTAGAAGCCAAGAGTTATCCAGTCAGACCTGAAATATGGCCATGGCCTTaGCCACTTCACCCACGTGGC +
Preference number: 3 (lower is better)
Translates to: GGELASCLEAKSYPVRPEIWPWP*PLHPRG
Trigger: GCCACGTGGGTGAAGTGGCAAAGGCCATGGCCATAT...TTCAGGTCTGACTGGATAACTCTTGGCTTCTAAGCAGCTGGCAAGCTCACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR CCA 72 bp CACAAGGAAGGGATTCCCAAGGCAGTTGTTAGTCTTTaGCCTGGGACAACAGATATGGCCATGGCCTTTGCC +
Preference number: 3 (lower is better)
Translates to: HKEGIPKAVVSL*PGTTDMAMAFA
Trigger: GGCAAAGGCCATGGCCATATCTGTTGTCCCAGGCCAAAGACTAACAACTGCCTTGGGAATCCCTTCCTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR TCA 72 bp GATACACATGCACAGACAAAAACTTTGCCCGAGTGTTaGCAGCTATTCCCTGAGCCCAGGCTGTACCCCAGT +
Preference number: 3 (lower is better)
Translates to: DTHAQTKTLPEC*QLFPEPRLYPS
Trigger: ACTGGGGTACAGCCTGGGCTCAGGGAATAGCTGTCAACACTCGGGCAAAGTTTTTGTCTGTGCATGTGTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR-3UTR CAA 90 bp TTAGTCTTTGGCCTGGGACAACAGATATGGCCATGGCCTTTGCCACTTCACCCATCCTTGGCTGATATCTaGGATCGTAGCACATTGCTG +
Preference number: 3 (lower is better)
Translates to: LVFGLGQQIWPWPLPLHPSLADI*DRSTLL
Trigger: CAGCAATGTGCTACGATCCAAGATATCAGCCAAGGA...TGGGTGAAGTGGCAAAGGCCATGGCCATATCTGTTGTCCCAGGCCAAAGACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR-3UTR CAA 90 bp ACAAGGAAGGGATTCCCAAGGCAGTTGTTAGTCTTTGGCCTGGGACAACAGATAAGAAGGGACCCTGGTTaGCTTGTAAGAAACAAGGCG +
Preference number: 3 (lower is better)
Translates to: TRKGFPRQLLVFGLGQQIRRDPG*LVRNKA
Trigger: CGCCTTGTTTCTTACAAGCAAACCAGGGTCCCTTCT...TATCTGTTGTCCCAGGCCAAAGACTAACAACTGCCTTGGGAATCCCTTCCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR-3UTR CAA 90 bp GGGGGTGAGCTTGCCAGCTGCTTAGAAGCCAAGAGTTATCCAGTCAGACCTGAACCCCAATATTCCATTTaGACCACTCTGCAGAATTTG +
Preference number: 3 (lower is better)
Translates to: GGELASCLEAKSYPVRPEPQYSI*TTLQNL
Trigger: CAAATTCTGCAGAGTGGTCAAAATGGAATATTGGGG...TTCAGGTCTGACTGGATAACTCTTGGCTTCTAAGCAGCTGGCAAGCTCACCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR CCA 72 bp TCTGTACCTACACTGTTAGCCACGTTTAACATGGTTTaGGGGAGCAGGAACCAACTCAATGCACAGTCCCTT +
Preference number: 3 (lower is better)
Translates to: SVPTLLATFNMV*GSRNQLNAQSL
Trigger: AAGGGACTGTGCATTGAGTTGGTTCCTGCTCCCCCAAACCATGTTAAACGTGGCTAACAGTGTAGGTACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR-3UTR CAA 90 bp CTGATATCTTGGATCGTAGCACATTGCTGTGAACCATGGCAAGTCCTTTGTTTTGGCTCAGAAGCCTGCTaGTGCCCTCACATTCTGTCT +
Preference number: 3 (lower is better)
Translates to: LISWIVAHCCEPWQVLCFGSEAC*CPHILS
Trigger: AGACAGAATGTGAGGGCACAAGCAGGCTTCTGAGCC...AAAACAAAGGACTTGCCATGGTTCACAGCAATGTGCTACGATCCAAGATATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR GCA 72 bp TGGGCTCCTTGGCTGATATCTTGGATCGTAGCACATTaGTGTGAACCATGGCAAGTCCTTTGTTTTACTGAT +
Preference number: 3 (lower is better)
Translates to: WAPWLISWIVAH*CEPWQVLCFTD
Trigger: ATCAGTAAAACAAAGGACTTGCCATGGTTCACAGCAATGTGCTACGATCCAAGATATCAGCCAAGGAGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR CCA 72 bp AGAAATACGTACATGTTACGTGCCAAGAAGGGACCCTaGTTTGCTTGTAAGAAACAAGGCGAGATCACAGTT +
Preference number: 3 (lower is better)
Translates to: RNTYMLRAKKGP*FACKKQGEITV
Trigger: AACTGTGATCTCGCCTTGTTTCTTACAAGCAAACCAGGGTCCCTTCTTGGCACGTAACATGTACGTATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR CCA 72 bp AACCTCTTTGTGGGTTTTAGGTTCGGTAAAATTAGTTaGGATCTTAATGGCTGTCTAAAGCAGGAAGAGACA +
Preference number: 3 (lower is better)
Translates to: NLFVGFRFGKIS*DLNGCLKQEET
Trigger: TGTCTCTTCCTGCTTTAGACAGCCATTAAGATCCCAACTAATTTTACCGAACCTAAAACCCACAAAGAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR-3UTR CAA 90 bp CTAAAAAGGAAATTCCTCACAACTGAGGTAGTTACTAAGTATCAGCACATTTTCCTTCTGGGAACTCCTTaGAAAGTGATTTGTTACATT +
Preference number: 3 (lower is better)
Translates to: LKRKFLTTEVVTKYQHIFLLGTP*KVICYI
Trigger: AATGTAACAAATCACTTTCAAAGGAGTTCCCAGAAG...GAAAATGTGCTGATACTTAGTAACTACCTCAGTTGTGAGGAATTTCCTTTTTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR GCA 90 bp GGGGGTGAGCTTGCCAGCTGCTTAGAAGCCAAGAGTTATCCAGTCAGACCTGAAGGGCAAGCCGAACCGTaGCATGGTGCGGGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: GGELASCLEAKSYPVRPEGQAEP*HGAGRG
Trigger: GCCCCGGCCCGCACCATGGCACGGTTCGGCTTGCCC...TTCAGGTCTGACTGGATAACTCTTGGCTTCTAAGCAGCTGGCAAGCTCACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp TTAGTCTTTGGCCTGGGACAACAGATATGGCCATGGCCTTTGCCACTTCACCCAAGCCGAACCGTGCCATaGTGCGGGCCGGGGCGGACG +
Preference number: 4 (lower is better)
Translates to: LVFGLGQQIWPWPLPLHPSRTVP*CGPGRT
Trigger: CGTCCGCCCCGGCCCGCACCATGGCACGGTTCGGCT...TGGGTGAAGTGGCAAAGGCCATGGCCATATCTGTTGTCCCAGGCCAAAGACTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR GCA 90 bp TTAGTCTTTGGCCTGGGACAACAGATATGGCCATGGCCTTTGCCACTTCACCCACTGCTTGGGCTGCCCTaGGCTGGTCCGCTCGTCCGG +
Preference number: 4 (lower is better)
Translates to: LVFGLGQQIWPWPLPLHPLLGLP*AGPLVR
Trigger: CCGGACGAGCGGACCAGCGCAGGGCAGCCCAAGCAG...TGGGTGAAGTGGCAAAGGCCATGGCCATATCTGTTGTCCCAGGCCAAAGACTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR GCA 90 bp GTTGTTAGTCTTTGGCCTGGGACAACAGATATGGCCATGGCCTTTGCCACTTCAGCGCGCTGCTTGGGCTaGCCTGCGCTGGTCCGCTCG +
Preference number: 4 (lower is better)
Translates to: VVSLWPGTTDMAMAFATSARCLG*PALVRS
Trigger: CGAGCGGACCAGCGCAGGGCAGCCCAAGCAGCGCGC...TGAAGTGGCAAAGGCCATGGCCATATCTGTTGTCCCAGGCCAAAGACTAACAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR GCA 90 bp GGGGGTGAGCTTGCCAGCTGCTTAGAAGCCAAGAGTTATCCAGTCAGACCTGAACGCGGCGCTGAGCACTaGCAGGGTGCAGAGAAGCGC +
Preference number: 4 (lower is better)
Translates to: GGELASCLEAKSYPVRPERGAEH*QGAEKR
Trigger: GCGCTTCTCTGCACCCTGGCAGTGCTCAGCGCCGCG...TTCAGGTCTGACTGGATAACTCTTGGCTTCTAAGCAGCTGGCAAGCTCACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp ACAAGGAAGGGATTCCCAAGGCAGTTGTTAGTCTTTGGCCTGGGACAACAGATATGGGCTGCCCTGCGCTaGTCCGCTCGTCCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: TRKGFPRQLLVFGLGQQIWAALR*SARPAG
Trigger: TCCAGCCGGACGAGCGGACCAGCGCAGGGCAGCCCA...TATCTGTTGTCCCAGGCCAAAGACTAACAACTGCCTTGGGAATCCCTTCCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp CTCTCAGACAGCTCCCTGTACATAATTGGGTTTGAAATCTCGACCACTCTAACAACCCGGCAAGCTGACTaGCCGGCGAGGCGGGGACGC +
Preference number: 4 (lower is better)
Translates to: LSDSSLYIIGFEISTTLTTRQAD*PARRGR
Trigger: GCGTCCCCGCCTCGCCGGCCAGTCAGCTTGCCGGGT...TGTTAGAGTGGTCGAGATTTCAAACCCAATTATGTACAGGGAGCTGTCTGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp GTTGTTAGTCTTTGGCCTGGGACAACAGATATGGCCATGGCCTTTGCCACTTCAACGCGTTCCCACCTTTaGGACCGGACGGGAAGCGGC +
Preference number: 4 (lower is better)
Translates to: VVSLWPGTTDMAMAFATSTRSHL*DRTGSG
Trigger: GCCGCTTCCCGTCCGGTCCCAAAGGTGGGAACGCGT...TGAAGTGGCAAAGGCCATGGCCATATCTGTTGTCCCAGGCCAAAGACTAACAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp TTAGTCTTTGGCCTGGGACAACAGATATGGCCATGGCCTTTGCCACTTCACCCAGCCAGCTGCTGTGGTTaGGCGTTCCTCGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: LVFGLGQQIWPWPLPLHPASCCG*AFLGVM
Trigger: CATCACCCCGAGGAACGCCCAACCACAGCAGCTGGC...TGGGTGAAGTGGCAAAGGCCATGGCCATATCTGTTGTCCCAGGCCAAAGACTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR TCA 90 bp ACACAAGCCCTTCACATGCTGTTAACTTTGGAAAAGTCAGGTCTTCTCCTAACAAGAGGCGCGGGCTGGTaGCCTCGGGGTTTCGCGGGG +
Preference number: 4 (lower is better)
Translates to: TQALHMLLTLEKSGLLLTRGAGW*PRGFAG
Trigger: CCCCGCGAAACCCCGAGGTCACCAGCCCGCGCCTCT...TGTTAGGAGAAGACCTGACTTTTCCAAAGTTAACAGCATGTGAAGGGCTTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR TCA 90 bp GGGGGTGAGCTTGCCAGCTGCTTAGAAGCCAAGAGTTATCCAGTCAGACCTGAAAGCAACTTTTCGACTTaGGCTCGGCAGCCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: GGELASCLEAKSYPVRPESNFST*ARQPAA
Trigger: CGCTGCTGGCTGCCGAGCTCAAGTCGAAAAGTTGCT...TTCAGGTCTGACTGGATAACTCTTGGCTTCTAAGCAGCTGGCAAGCTCACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR TCA 90 bp GGGGGTGAGCTTGCCAGCTGCTTAGAAGCCAAGAGTTATCCAGTCAGACCTGAAACTTTGCCCGAGTGTTaGCAGCTATTCCCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: GGELASCLEAKSYPVRPETLPEC*QLFPEP
Trigger: GGGCTCAGGGAATAGCTGTCAACACTCGGGCAAAGT...TTCAGGTCTGACTGGATAACTCTTGGCTTCTAAGCAGCTGGCAAGCTCACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR TCA 90 bp TTAGTCTTTGGCCTGGGACAACAGATATGGCCATGGCCTTTGCCACTTCACCCATTTGGGGAGTGGGGGTaGGCTTGCCAGCTGCTTAGA +
Preference number: 4 (lower is better)
Translates to: LVFGLGQQIWPWPLPLHPFGEWG*ACQLLR
Trigger: TCTAAGCAGCTGGCAAGCTCACCCCCACTCCCCAAA...TGGGTGAAGTGGCAAAGGCCATGGCCATATCTGTTGTCCCAGGCCAAAGACTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR GCA 90 bp CTGATATCTTGGATCGTAGCACATTGCTGTGAACCATGGCAAGTCCTTTGTTTTGCGTTCGCTGCGCGCTaGTTGGGCTGCCCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: LISWIVAHCCEPWQVLCFAFAAR*LGCPAL
Trigger: CAGCGCAGGGCAGCCCAAGCAGCGCGCAGCGAACGC...AAAACAAAGGACTTGCCATGGTTCACAGCAATGTGCTACGATCCAAGATATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR GCA 90 bp GCACATTGCTGTGAACCATGGCAAGTCCTTTGTTTTACTGATAAGAGGGGGCTAGAGGAGGTAGGCCTGTaGCCCAGGACGGACACCAGC +
Preference number: 4 (lower is better)
Translates to: AHCCEPWQVLCFTDKRGLEEVGL*PRTDTS
Trigger: GCTGGTGTCCGTCCTGGGGCACAGGCCTACCTCCTC...TAGCCCCCTCTTATCAGTAAAACAAAGGACTTGCCATGGTTCACAGCAATGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp GGGGGTGAGCTTGCCAGCTGCTTAGAAGCCAAGAGTTATCCAGTCAGACCTGAAGGAGGGAGAAGGAGTTaGAGTTGGTGGAAGAGGCGA +
Preference number: 4 (lower is better)
Translates to: GGELASCLEAKSYPVRPEGGRRS*SWWKRR
Trigger: TCGCCTCTTCCACCAACTCCAACTCCTTCTCCCTCC...TTCAGGTCTGACTGGATAACTCTTGGCTTCTAAGCAGCTGGCAAGCTCACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR TCA 90 bp GTTGTTAGTCTTTGGCCTGGGACAACAGATATGGCCATGGCCTTTGCCACTTCAAGATGCAGAAGACAGTaGGGAGGTAGGCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: VVSLWPGTTDMAMAFATSRCRRQ*GGRPVP
Trigger: GGGCACAGGCCTACCTCCTCACTGTCTTCTGCATCT...TGAAGTGGCAAAGGCCATGGCCATATCTGTTGTCCCAGGCCAAAGACTAACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp TTAGTCTTTGGCCTGGGACAACAGATATGGCCATGGCCTTTGCCACTTCACCCATTGCTGGTGTCAACCTaGACCTCTGGGTTGTTGCCC +
Preference number: 4 (lower is better)
Translates to: LVFGLGQQIWPWPLPLHPLLVST*TSGLLP
Trigger: GGGCAACAACCCAGAGGTCCAGGTTGACACCAGCAA...TGGGTGAAGTGGCAAAGGCCATGGCCATATCTGTTGTCCCAGGCCAAAGACTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp TTAGTCTTTGGCCTGGGACAACAGATATGGCCATGGCCTTTGCCACTTCACCCAGCTGTACCCCAGTTCTaGCTAGCTCTCAGACAGCTC +
Preference number: 4 (lower is better)
Translates to: LVFGLGQQIWPWPLPLHPAVPQF*LALRQL
Trigger: GAGCTGTCTGAGAGCTAGCCAGAACTGGGGTACAGC...TGGGTGAAGTGGCAAAGGCCATGGCCATATCTGTTGTCCCAGGCCAAAGACTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR TCA 90 bp AAAGCAGTAGTCTGCAGTCTCTTCCAACTATCACCAATAAATGAAGTACACATATGGACTCGGCTCGGCTaGCTCTGCCCTCCGCCGCGC +
Preference number: 4 (lower is better)
Translates to: KAVVCSLFQLSPINEVHIWTRLG*LCPPPR
Trigger: GCGCGGCGGAGGGCAGAGTCAGCCGAGCCGAGTCCA...TATGTGTACTTCATTTATTGGTGATAGTTGGAAGAGACTGCAGACTACTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR TCA 90 bp CCTGAATGCTTTCTATCTTTCAAGGGGGATGATATCCAGAATCTTTTTCTAAATGCGAACCCGGCAAGCTaGCTGGCCGGCGAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: PECFLSFKGDDIQNLFLNANPAS*LAGEAG
Trigger: CCCCGCCTCGCCGGCCAGTCAGCTTGCCGGGTTCGC...ATTTAGAAAAAGATTCTGGATATCATCCCCCTTGAAAGATAGAAAGCATTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR GCA 90 bp GGGGGTGAGCTTGCCAGCTGCTTAGAAGCCAAGAGTTATCCAGTCAGACCTGAAAACAGTCATCCTCATTaGCGTTTCCTGCAGCCATCC +
Preference number: 4 (lower is better)
Translates to: GGELASCLEAKSYPVRPENSHPH*RFLQPS
Trigger: GGATGGCTGCAGGAAACGGCAATGAGGATGACTGTT...TTCAGGTCTGACTGGATAACTCTTGGCTTCTAAGCAGCTGGCAAGCTCACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp GTTGTTAGTCTTTGGCCTGGGACAACAGATATGGCCATGGCCTTTGCCACTTCAAGAAGGAGTTGGAGTTaGTGGAAGAGGCGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: VVSLWPGTTDMAMAFATSRRSWS*WKRRAG
Trigger: GCCTGCTCGCCTCTTCCACCAACTCCAACTCCTTCT...TGAAGTGGCAAAGGCCATGGCCATATCTGTTGTCCCAGGCCAAAGACTAACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp ACAAGGAAGGGATTCCCAAGGCAGTTGTTAGTCTTTGGCCTGGGACAACAGATAAGGGCATGGGTACACTaGGCTGTGGGGTTTACCACG +
Preference number: 4 (lower is better)
Translates to: TRKGFPRQLLVFGLGQQIRAWVH*AVGFTT
Trigger: CGTGGTAAACCCCACAGCCCAGTGTACCCATGCCCT...TATCTGTTGTCCCAGGCCAAAGACTAACAACTGCCTTGGGAATCCCTTCCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR TCA 90 bp ACACAAGCCCTTCACATGCTGTTAACTTTGGAAAAGTCAGGTCTTCTCCTAACAGGGCGTTCCTCGGGGTaGTGTGGTCTGAAGCGAGCA +
Preference number: 4 (lower is better)
Translates to: TQALHMLLTLEKSGLLLTGRSSG*CGLKRA
Trigger: TGCTCGCTTCAGACCACATCACCCCGAGGAACGCCC...TGTTAGGAGAAGACCTGACTTTTCCAAAGTTAACAGCATGTGAAGGGCTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR GCA 90 bp AGTGGGTTCAAGAAATGGACCTATAGTGATCTTAGCTTATGTAATTCAACTCATCGAACCGTGCCATGGTaGGGGCCGGGGCGGACGCGT +
Preference number: 4 (lower is better)
Translates to: SGFKKWTYSDLSLCNSTHRTVPW*GPGRTR
Trigger: ACGCGTCCGCCCCGGCCCGCACCATGGCACGGTTCG...ATGAGTTGAATTACATAAGCTAAGATCACTATAGGTCCATTTCTTGAACCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR GCA 90 bp GTTGTTAGTCTTTGGCCTGGGACAACAGATATGGCCATGGCCTTTGCCACTTCACCTGGAGCTTCAATTTaGGAGGGACATCTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: VVSLWPGTTDMAMAFATSPGASI*EGHLRR
Trigger: CCTTCGGAGATGTCCCTCGCAAATTGAAGCTCCAGG...TGAAGTGGCAAAGGCCATGGCCATATCTGTTGTCCCAGGCCAAAGACTAACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp GCACATTGCTGTGAACCATGGCAAGTCCTTTGTTTTACTGATAAGAGGGGGCTAGGGTACACTGGGCTGTaGGGTTTACCACGGAGACCT +
Preference number: 4 (lower is better)
Translates to: AHCCEPWQVLCFTDKRGLGYTGL*GLPRRP
Trigger: AGGTCTCCGTGGTAAACCCCACAGCCCAGTGTACCC...TAGCCCCCTCTTATCAGTAAAACAAAGGACTTGCCATGGTTCACAGCAATGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp GCACATTGCTGTGAACCATGGCAAGTCCTTTGTTTTACTGATAAGAGGGGGCTAGTCAACCTGGACCTCTaGGTTGTTGCCCTGGTTGGC +
Preference number: 4 (lower is better)
Translates to: AHCCEPWQVLCFTDKRGLVNLDL*VVALVG
Trigger: GCCAACCAGGGCAACAACCCAGAGGTCCAGGTTGAC...TAGCCCCCTCTTATCAGTAAAACAAAGGACTTGCCATGGTTCACAGCAATGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp TTAGTCTTTGGCCTGGGACAACAGATATGGCCATGGCCTTTGCCACTTCACCCAGTATGTCTGGTTTGCTaGTGTCAACCTGGACCTCTG +
Preference number: 4 (lower is better)
Translates to: LVFGLGQQIWPWPLPLHPVCLVC*CQPGPL
Trigger: CAGAGGTCCAGGTTGACACCAGCAAACCAGACATAC...TGGGTGAAGTGGCAAAGGCCATGGCCATATCTGTTGTCCCAGGCCAAAGACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR TCA 90 bp GGGGGTGAGCTTGCCAGCTGCTTAGAAGCCAAGAGTTATCCAGTCAGACCTGAACCAAACAGCCTCTCATaGTGTTTGAGCAGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: GGELASCLEAKSYPVRPEPNSLS*CLSSSC
Trigger: ACAACTACTGCTCAAACATCATGAGAGGCTGTTTGG...TTCAGGTCTGACTGGATAACTCTTGGCTTCTAAGCAGCTGGCAAGCTCACCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR GCA 90 bp CTAAAAAGGAAATTCCTCACAACTGAGGTAGTTACTAAGTATCAGCACATTTTCTCCGCCGCGCGGCTGTaGCCTTCTCAGCTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: LKRKFLTTEVVTKYQHIFSAARL*PSQLCR
Trigger: GCGGCAGAGCTGAGAAGGGCACAGCCGCGCGGCGGA...GAAAATGTGCTGATACTTAGTAACTACCTCAGTTGTGAGGAATTTCCTTTTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR GCA 90 bp ACAAGGAAGGGATTCCCAAGGCAGTTGTTAGTCTTTGGCCTGGGACAACAGATACCATCCTCTCATCGTTaGAAACGTTGCTCGGAAGGG +
Preference number: 4 (lower is better)
Translates to: TRKGFPRQLLVFGLGQQIPSSHR*KRCSEG
Trigger: CCCTTCCGAGCAACGTTTGCAACGATGAGAGGATGG...TATCTGTTGTCCCAGGCCAAAGACTAACAACTGCCTTGGGAATCCCTTCCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp TGCTTTCTATCTTTCAAGGGGGATGATATCCAGAATCTTTTTCTAAATGGGTTATCGCTGCGCGCTGCTTaGGCTGCCCTGCGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: CFLSFKGDDIQNLFLNGLSLRAA*AALRWS
Trigger: GGACCAGCGCAGGGCAGCCCAAGCAGCGCGCAGCGA...TAACCCATTTAGAAAAAGATTCTGGATATCATCCCCCTTGAAAGATAGAAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp TTAGTCTTTGGCCTGGGACAACAGATATGGCCATGGCCTTTGCCACTTCACCCAAAAGCACGAGTAACCTaGAGCTTCAATTTGCGAGGG +
Preference number: 4 (lower is better)
Translates to: LVFGLGQQIWPWPLPLHPKARVT*SFNLRG
Trigger: CCCTCGCAAATTGAAGCTCCAGGTTACTCGTGCTTT...TGGGTGAAGTGGCAAAGGCCATGGCCATATCTGTTGTCCCAGGCCAAAGACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR GCA 90 bp GCACATTGCTGTGAACCATGGCAAGTCCTTTGTTTTACTGATAAGAGGGGGCTAGGACCTCTGGGTTGTTaGCCTGGTTGGCTAATCCAT +
Preference number: 4 (lower is better)
Translates to: AHCCEPWQVLCFTDKRGLGPLGC*PGWLIH
Trigger: ATGGATTAGCCAACCAGGGCAACAACCCAGAGGTCC...TAGCCCCCTCTTATCAGTAAAACAAAGGACTTGCCATGGTTCACAGCAATGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp TTAGTCTTTGGCCTGGGACAACAGATATGGCCATGGCCTTTGCCACTTCACCCACATTCTTCATCTTGCTaGTCATCACTCGAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: LVFGLGQQIWPWPLPLHPHSSSC*SSLEEP
Trigger: TGGCTCTTCGAGTGATGACCAGCAAGATGAAGAATG...TGGGTGAAGTGGCAAAGGCCATGGCCATATCTGTTGTCCCAGGCCAAAGACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp TTAGTCTTTGGCCTGGGACAACAGATATGGCCATGGCCTTTGCCACTTCACCCACCTTGGCTGATATCTTaGATCGTAGCACATTGCTGT +
Preference number: 4 (lower is better)
Translates to: LVFGLGQQIWPWPLPLHPPWLIS*IVAHCC
Trigger: ACAGCAATGTGCTACGATCCAAGATATCAGCCAAGG...TGGGTGAAGTGGCAAAGGCCATGGCCATATCTGTTGTCCCAGGCCAAAGACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp GGGGGTGAGCTTGCCAGCTGCTTAGAAGCCAAGAGTTATCCAGTCAGACCTGAACTGGAAGAAAACAGCTaGGCAGAGTTCAAGGTTTTA +
Preference number: 4 (lower is better)
Translates to: GGELASCLEAKSYPVRPELEENS*AEFKVL
Trigger: TAAAACCTTGAACTCTGCCCAGCTGTTTTCTTCCAG...TTCAGGTCTGACTGGATAACTCTTGGCTTCTAAGCAGCTGGCAAGCTCACCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR CAA 72 bp TTTGGTAAGGACACAAGGAAGGGATTCCCAAGGCAGTaGTTAGTCTTTGGCCTGGGACAACAGATATGGCCA +
Preference number: 4 (lower is better)
Translates to: FGKDTRKGFPRQ*LVFGLGQQIWP
Trigger: TGGCCATATCTGTTGTCCCAGGCCAAAGACTAACAACTGCCTTGGGAATCCCTTCCTTGTGTCCTTACCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR TCA 90 bp GGGGGTGAGCTTGCCAGCTGCTTAGAAGCCAAGAGTTATCCAGTCAGACCTGAACACTACTTTCATCACTaGTATCAAAGAAGTCCACGT +
Preference number: 4 (lower is better)
Translates to: GGELASCLEAKSYPVRPEHYFHH*YQRSPR
Trigger: ACGTGGACTTCTTTGATATCAGTGATGAAAGTAGTG...TTCAGGTCTGACTGGATAACTCTTGGCTTCTAAGCAGCTGGCAAGCTCACCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR GCA 90 bp CTCTCAGACAGCTCCCTGTACATAATTGGGTTTGAAATCTCGACCACTCTAACACATCGTTGCAAACGTTaGTCGGAAGGGAGGACCAGA +
Preference number: 4 (lower is better)
Translates to: LSDSSLYIIGFEISTTLTHRCKR*SEGRTR
Trigger: TCTGGTCCTCCCTTCCGAGCAACGTTTGCAACGATG...TGTTAGAGTGGTCGAGATTTCAAACCCAATTATGTACAGGGAGCTGTCTGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR GCA 90 bp ACAAGGAAGGGATTCCCAAGGCAGTTGTTAGTCTTTGGCCTGGGACAACAGATACTGCAAACAGGTACCTaGTTTTGCCTTTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: TRKGFPRQLLVFGLGQQILQTGT*FCLSHS
Trigger: GGAATGGGAAAGGCAAAAGCAGGTACCTGTTTGCAG...TATCTGTTGTCCCAGGCCAAAGACTAACAACTGCCTTGGGAATCCCTTCCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR GCA 90 bp TTAGTCTTTGGCCTGGGACAACAGATATGGCCATGGCCTTTGCCACTTCACCCATCCATTTCCTGTCACTaGAAACAGGTACCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: LVFGLGQQIWPWPLPLHPSISCH*KQVPAF
Trigger: AAAAGCAGGTACCTGTTTGCAGTGACAGGAAATGGA...TGGGTGAAGTGGCAAAGGCCATGGCCATATCTGTTGTCCCAGGCCAAAGACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR GCA 90 bp ACAAGGAAGGGATTCCCAAGGCAGTTGTTAGTCTTTGGCCTGGGACAACAGATATCAGTATGTCTGGTTTaGTGGTGTCAACCTGGACCT +
Preference number: 4 (lower is better)
Translates to: TRKGFPRQLLVFGLGQQISVCLV*WCQPGP
Trigger: AGGTCCAGGTTGACACCAGCAAACCAGACATACTGA...TATCTGTTGTCCCAGGCCAAAGACTAACAACTGCCTTGGGAATCCCTTCCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR GCA 90 bp TTAGTCTTTGGCCTGGGACAACAGATATGGCCATGGCCTTTGCCACTTCACCCATATCTCCACTCTCTCTaGATAACCAGGAACAAGATG +
Preference number: 4 (lower is better)
Translates to: LVFGLGQQIWPWPLPLHPYLHSL*ITRNKM
Trigger: CATCTTGTTCCTGGTTATGCAGAGAGAGTGGAGATA...TGGGTGAAGTGGCAAAGGCCATGGCCATATCTGTTGTCCCAGGCCAAAGACTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR GCA 90 bp GGGGGTGAGCTTGCCAGCTGCTTAGAAGCCAAGAGTTATCCAGTCAGACCTGAATTCAAAGCAGTAGTCTaGAGTCTCTTCCAACTATCA +
Preference number: 4 (lower is better)
Translates to: GGELASCLEAKSYPVRPEFKAVV*SLFQLS
Trigger: TGATAGTTGGAAGAGACTGCAGACTACTGCTTTGAA...TTCAGGTCTGACTGGATAACTCTTGGCTTCTAAGCAGCTGGCAAGCTCACCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp ACACAAGCCCTTCACATGCTGTTAACTTTGGAAAAGTCAGGTCTTCTCCTAACAATCTTCAACAGGGCATaGGTACACTGGGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: TQALHMLLTLEKSGLLLTIFNRA*VHWAVG
Trigger: CCCCACAGCCCAGTGTACCCATGCCCTGTTGAAGAT...TGTTAGGAGAAGACCTGACTTTTCCAAAGTTAACAGCATGTGAAGGGCTTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp CCTGAATGCTTTCTATCTTTCAAGGGGGATGATATCCAGAATCTTTTTCTAAATCAGCTGGGAGGGGCTTaGGGGGTCCACATCCCTGGA +
Preference number: 4 (lower is better)
Translates to: PECFLSFKGDDIQNLFLNQLGGA*GVHIPG
Trigger: TCCAGGGATGTGGACCCCCCAAGCCCCTCCCAGCTG...ATTTAGAAAAAGATTCTGGATATCATCCCCCTTGAAAGATAGAAAGCATTCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp CTCTCAGACAGCTCCCTGTACATAATTGGGTTTGAAATCTCGACCACTCTAACATTCCTCGGGGTGATGTaGTCTGAAGCGAGCACTGAA +
Preference number: 4 (lower is better)
Translates to: LSDSSLYIIGFEISTTLTFLGVM*SEASTE
Trigger: TTCAGTGCTCGCTTCAGACCACATCACCCCGAGGAA...TGTTAGAGTGGTCGAGATTTCAAACCCAATTATGTACAGGGAGCTGTCTGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp CTCTCAGACAGCTCCCTGTACATAATTGGGTTTGAAATCTCGACCACTCTAACAGCCACTTCACCCACGTaGCTAAAGGTCACCACTAAG +
Preference number: 4 (lower is better)
Translates to: LSDSSLYIIGFEISTTLTATSPT*LKVTTK
Trigger: CTTAGTGGTGACCTTTAGCCACGTGGGTGAAGTGGC...TGTTAGAGTGGTCGAGATTTCAAACCCAATTATGTACAGGGAGCTGTCTGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR TCA 90 bp GCACATTGCTGTGAACCATGGCAAGTCCTTTGTTTTACTGATAAGAGGGGGCTAGGGCATCGTTCTTGTTaGAGCCTTTGGACACGTAAA +
Preference number: 4 (lower is better)
Translates to: AHCCEPWQVLCFTDKRGLGHRSC*SLWTRK
Trigger: TTTACGTGTCCAAAGGCTTCAACAAGAACGATGCCC...TAGCCCCCTCTTATCAGTAAAACAAAGGACTTGCCATGGTTCACAGCAATGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR TCA 90 bp AAGAAGGGACCCTGGTTTGCTTGTAAGAAACAAGGCGAGATCACAGTTGGAAAAAAGACAGCTTGCAAATaGTTGCACTGTTCGCTGACC +
Preference number: 4 (lower is better)
Translates to: KKGPWFACKKQGEITVGKKTACK*LHCSLT
Trigger: GGTCAGCGAACAGTGCAATCATTTGCAAGCTGTCTT...TTTTCCAACTGTGATCTCGCCTTGTTTCTTACAAGCAAACCAGGGTCCCTTCTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp AAGAAGGGACCCTGGTTTGCTTGTAAGAAACAAGGCGAGATCACAGTTGGAAAAGCAGTAGTTGTAACATaGCTTCACAGTCACGAGACC +
Preference number: 4 (lower is better)
Translates to: KKGPWFACKKQGEITVGKAVVVT*LHSHET
Trigger: GGTCTCGTGACTGTGAAGCCATGTTACAACTACTGC...TTTTCCAACTGTGATCTCGCCTTGTTTCTTACAAGCAAACCAGGGTCCCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp GCACATTGCTGTGAACCATGGCAAGTCCTTTGTTTTACTGATAAGAGGGGGCTAGCCAAGAAGGGACCCTaGTTTGCTTGTAAGAAACAA +
Preference number: 4 (lower is better)
Translates to: AHCCEPWQVLCFTDKRGLAKKGP*FACKKQ
Trigger: TTGTTTCTTACAAGCAAACCAGGGTCCCTTCTTGGC...TAGCCCCCTCTTATCAGTAAAACAAAGGACTTGCCATGGTTCACAGCAATGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp ACACAAGCCCTTCACATGCTGTTAACTTTGGAAAAGTCAGGTCTTCTCCTAACACTGGGACAACAGATATaGCCATGGCCTTTGCCACTT +
Preference number: 4 (lower is better)
Translates to: TQALHMLLTLEKSGLLLTLGQQI*PWPLPL
Trigger: AAGTGGCAAAGGCCATGGCCATATCTGTTGTCCCAG...TGTTAGGAGAAGACCTGACTTTTCCAAAGTTAACAGCATGTGAAGGGCTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
3UTR CAA 72 bp ATACGTACATGTTACGTGCCAAGAAGGGACCCTGGTTaGCTTGTAAGAAACAAGGCGAGATCACAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: IRTCYVPRRDPG*LVRNKARSQLE
Trigger: TTCCAACTGTGATCTCGCCTTGTTTCTTACAAGCAAACCAGGGTCCCTTCTTGGCACGTAACATGTACGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR TCA 90 bp CCTGAATGCTTTCTATCTTTCAAGGGGGATGATATCCAGAATCTTTTTCTAAATGCAACCGCTAAGCCTTaGGCGAAAGTACGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PECFLSFKGDDIQNLFLNATAKP*AKVRAA
Trigger: AGCAGCCCGTACTTTCGCTCAAGGCTTAGCGGTTGC...ATTTAGAAAAAGATTCTGGATATCATCCCCCTTGAAAGATAGAAAGCATTCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR GCA 90 bp CTGATATCTTGGATCGTAGCACATTGCTGTGAACCATGGCAAGTCCTTTGTTTTGGTGAGCTTGCCAGCTaGTTAGAAGCCAAGAGTTAT +
Preference number: 4 (lower is better)
Translates to: LISWIVAHCCEPWQVLCFGELAS*LEAKSY
Trigger: ATAACTCTTGGCTTCTAAGCAGCTGGCAAGCTCACC...AAAACAAAGGACTTGCCATGGTTCACAGCAATGTGCTACGATCCAAGATATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp AGTGGGTTCAAGAAATGGACCTATAGTGATCTTAGCTTATGTAATTCAACTCATAGGAGTTGGAGTTGGTaGAAGAGGCGAGCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: SGFKKWTYSDLSLCNSTHRSWSW*KRRAGG
Trigger: TCCGCCTGCTCGCCTCTTCCACCAACTCCAACTCCT...ATGAGTTGAATTACATAAGCTAAGATCACTATAGGTCCATTTCTTGAACCCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp ACACAAGCCCTTCACATGCTGTTAACTTTGGAAAAGTCAGGTCTTCTCCTAACAGGTTGTTGCCCTGGTTaGCTAATCCATTTCCTGTCA +
Preference number: 4 (lower is better)
Translates to: TQALHMLLTLEKSGLLLTGCCPG*LIHFLS
Trigger: TGACAGGAAATGGATTAGCCAACCAGGGCAACAACC...TGTTAGGAGAAGACCTGACTTTTCCAAAGTTAACAGCATGTGAAGGGCTTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp ACACAAGCCCTTCACATGCTGTTAACTTTGGAAAAGTCAGGTCTTCTCCTAACATCTGGGTTGTTGCCCTaGTTGGCTAATCCATTTCCT +
Preference number: 4 (lower is better)
Translates to: TQALHMLLTLEKSGLLLTSGLLP*LANPFP
Trigger: AGGAAATGGATTAGCCAACCAGGGCAACAACCCAGA...TGTTAGGAGAAGACCTGACTTTTCCAAAGTTAACAGCATGTGAAGGGCTTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp GTTGTTAGTCTTTGGCCTGGGACAACAGATATGGCCATGGCCTTTGCCACTTCACACTTCTTAAACCAGTaGCCACATAGTAAAAACTGT +
Preference number: 4 (lower is better)
Translates to: VVSLWPGTTDMAMAFATSHFLNQ*PHSKNC
Trigger: ACAGTTTTTACTATGTGGCCACTGGTTTAAGAAGTG...TGAAGTGGCAAAGGCCATGGCCATATCTGTTGTCCCAGGCCAAAGACTAACAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp CTGATATCTTGGATCGTAGCACATTGCTGTGAACCATGGCAAGTCCTTTGTTTTACGTTTAACATGGTTTaGGGGAGCAGGAACCAACTC +
Preference number: 4 (lower is better)
Translates to: LISWIVAHCCEPWQVLCFTFNMV*GSRNQL
Trigger: GAGTTGGTTCCTGCTCCCCCAAACCATGTTAAACGT...AAAACAAAGGACTTGCCATGGTTCACAGCAATGTGCTACGATCCAAGATATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp AAGAAGGGACCCTGGTTTGCTTGTAAGAAACAAGGCGAGATCACAGTTGGAAAAATACAATCTGACAAGTaGCTCAGAAGCCTGCTTGTG +
Preference number: 4 (lower is better)
Translates to: KKGPWFACKKQGEITVGKIQSDK*LRSLLV
Trigger: CACAAGCAGGCTTCTGAGCCACTTGTCAGATTGTAT...TTTTCCAACTGTGATCTCGCCTTGTTTCTTACAAGCAAACCAGGGTCCCTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp ACAAGGAAGGGATTCCCAAGGCAGTTGTTAGTCTTTGGCCTGGGACAACAGATAACACATACAAAAATCTaGACACCTAGTTCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: TRKGFPRQLLVFGLGQQITHTKI*TPSSPL
Trigger: TAGGGGAGAACTAGGTGTCCAGATTTTTGTATGTGT...TATCTGTTGTCCCAGGCCAAAGACTAACAACTGCCTTGGGAATCCCTTCCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR TCA 90 bp ACACAAGCCCTTCACATGCTGTTAACTTTGGAAAAGTCAGGTCTTCTCCTAACACGAAGAGCCATGATTTaGCGAAGGATCAGTATGTCT +
Preference number: 4 (lower is better)
Translates to: TQALHMLLTLEKSGLLLTRRAMI*RRISMS
Trigger: AGACATACTGATCCTTCGTCAAATCATGGCTCTTCG...TGTTAGGAGAAGACCTGACTTTTCCAAAGTTAACAGCATGTGAAGGGCTTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR TCA 90 bp CTGATATCTTGGATCGTAGCACATTGCTGTGAACCATGGCAAGTCCTTTGTTTTGCTTTGAATACAATCTaGCAAGTGGCTCAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: LISWIVAHCCEPWQVLCFALNTI*QVAQKP
Trigger: AGGCTTCTGAGCCACTTGTCAGATTGTATTCAAAGC...AAAACAAAGGACTTGCCATGGTTCACAGCAATGTGCTACGATCCAAGATATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR TCA 90 bp GCACATTGCTGTGAACCATGGCAAGTCCTTTGTTTTACTGATAAGAGGGGGCTACTTGGATTGATGCTTTaGATACAATCTGACAAGTGG +
Preference number: 4 (lower is better)
Translates to: AHCCEPWQVLCFTDKRGLLGLML*IQSDKW
Trigger: CCACTTGTCAGATTGTATTCAAAGCATCAATCCAAG...TAGCCCCCTCTTATCAGTAAAACAAAGGACTTGCCATGGTTCACAGCAATGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR GCA 90 bp TGCTTTCTATCTTTCAAGGGGGATGATATCCAGAATCTTTTTCTAAATGGGTTACAAACTAGTGCCAGCTaGTGTGGTTGGGCGTTCCTC +
Preference number: 4 (lower is better)
Translates to: CFLSFKGDDIQNLFLNGLQTSAS*CGWAFL
Trigger: GAGGAACGCCCAACCACAGCAGCTGGCACTAGTTTG...TAACCCATTTAGAAAAAGATTCTGGATATCATCCCCCTTGAAAGATAGAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR GCA 90 bp TGCTTTCTATCTTTCAAGGGGGATGATATCCAGAATCTTTTTCTAAATGGGTTATATGGCCATGGCCTTTaGCACTTCACCCACGTGGCT +
Preference number: 4 (lower is better)
Translates to: CFLSFKGDDIQNLFLNGLYGHGL*HFTHVA
Trigger: AGCCACGTGGGTGAAGTGGCAAAGGCCATGGCCATA...TAACCCATTTAGAAAAAGATTCTGGATATCATCCCCCTTGAAAGATAGAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp ACACAAGCCCTTCACATGCTGTTAACTTTGGAAAAGTCAGGTCTTCTCCTAACAAAGGATCAGTATGTCTaGTTTGCTGGTGTCAACCTG +
Preference number: 4 (lower is better)
Translates to: TQALHMLLTLEKSGLLLTKDQYV*FAGVNL
Trigger: CAGGTTGACACCAGCAAACCAGACATACTGATCCTT...TGTTAGGAGAAGACCTGACTTTTCCAAAGTTAACAGCATGTGAAGGGCTTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp CTGATATCTTGGATCGTAGCACATTGCTGTGAACCATGGCAAGTCCTTTGTTTTGCAGTTGTTAGTCTTTaGCCTGGGACAACAGATATG +
Preference number: 4 (lower is better)
Translates to: LISWIVAHCCEPWQVLCFAVVSL*PGTTDM
Trigger: CATATCTGTTGTCCCAGGCCAAAGACTAACAACTGC...AAAACAAAGGACTTGCCATGGTTCACAGCAATGTGCTACGATCCAAGATATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp GTTGTTAGTCTTTGGCCTGGGACAACAGATATGGCCATGGCCTTTGCCACTTCATTCGGTAAAATTAGTTaGGATCTTAATGGCTGTCTA +
Preference number: 4 (lower is better)
Translates to: VVSLWPGTTDMAMAFATSFGKIS*DLNGCL
Trigger: TAGACAGCCATTAAGATCCCAACTAATTTTACCGAA...TGAAGTGGCAAAGGCCATGGCCATATCTGTTGTCCCAGGCCAAAGACTAACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp GTTGTTAGTCTTTGGCCTGGGACAACAGATATGGCCATGGCCTTTGCCACTTCACCACTCTGCAGAATTTaGTGTAAAAAGTTGAATGAA +
Preference number: 4 (lower is better)
Translates to: VVSLWPGTTDMAMAFATSPLCRI*CKKLNE
Trigger: TTCATTCAACTTTTTACACCAAATTCTGCAGAGTGG...TGAAGTGGCAAAGGCCATGGCCATATCTGTTGTCCCAGGCCAAAGACTAACAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR TCA 90 bp CCTGAATGCTTTCTATCTTTCAAGGGGGATGATATCCAGAATCTTTTTCTAAATTCTGAAGGGCACTGCTaGTACTCACAGCCACTTCCA +
Preference number: 4 (lower is better)
Translates to: PECFLSFKGDDIQNLFLNSEGHC*YSQPLP
Trigger: TGGAAGTGGCTGTGAGTATCAGCAGTGCCCTTCAGA...ATTTAGAAAAAGATTCTGGATATCATCCCCCTTGAAAGATAGAAAGCATTCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR GCA 90 bp CCTGAATGCTTTCTATCTTTCAAGGGGGATGATATCCAGAATCTTTTTCTAAATCCGAAGGGCTTCAGCTaGTCCGTATACTTGCTCACA +
Preference number: 4 (lower is better)
Translates to: PECFLSFKGDDIQNLFLNPKGFS*SVYLLT
Trigger: TGTGAGCAAGTATACGGAGCAGCTGAAGCCCTTCGG...ATTTAGAAAAAGATTCTGGATATCATCCCCCTTGAAAGATAGAAAGCATTCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR GCA 90 bp TGCTTTCTATCTTTCAAGGGGGATGATATCCAGAATCTTTTTCTAAATGGGTTATTACCACGGAGACCTTaGTCACGACATCTCCCGCAA +
Preference number: 4 (lower is better)
Translates to: CFLSFKGDDIQNLFLNGLLPRRP*SRHLPQ
Trigger: TTGCGGGAGATGTCGTGAGCAAGGTCTCCGTGGTAA...TAACCCATTTAGAAAAAGATTCTGGATATCATCCCCCTTGAAAGATAGAAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR GCA 90 bp CTGATATCTTGGATCGTAGCACATTGCTGTGAACCATGGCAAGTCCTTTGTTTTGTCGTTCCCATTGTATaGATTCTTCATCTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: LISWIVAHCCEPWQVLCFVVPIV*ILHLAG
Trigger: ACCAGCAAGATGAAGAATGCATACAATGGGAACGAC...AAAACAAAGGACTTGCCATGGTTCACAGCAATGTGCTACGATCCAAGATATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR TCA 90 bp CTCTCAGACAGCTCCCTGTACATAATTGGGTTTGAAATCTCGACCACTCTAACAATAACTGGGACATCCTaGATGCTTTCTATCTTTCAA +
Preference number: 4 (lower is better)
Translates to: LSDSSLYIIGFEISTTLTITGTS*MLSIFQ
Trigger: TTGAAAGATAGAAAGCATTCAGGATGTCCCAGTTAT...TGTTAGAGTGGTCGAGATTTCAAACCCAATTATGTACAGGGAGCTGTCTGAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR TCA 90 bp CTGATATCTTGGATCGTAGCACATTGCTGTGAACCATGGCAAGTCCTTTGTTTTGTACATAATTGGGTTTaGAATCTCGACCACTCTAAC +
Preference number: 4 (lower is better)
Translates to: LISWIVAHCCEPWQVLCFVHNWV*NLDHSN
Trigger: GTTAGAGTGGTCGAGATTTCAAACCCAATTATGTAC...AAAACAAAGGACTTGCCATGGTTCACAGCAATGTGCTACGATCCAAGATATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR TCA 90 bp CTAAAAAGGAAATTCCTCACAACTGAGGTAGTTACTAAGTATCAGCACATTTTCCGTAGCACATTGCTGTaGACCATGGCAAGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: LKRKFLTTEVVTKYQHIFRSTLL*TMASPL
Trigger: CAAAGGACTTGCCATGGTTCACAGCAATGTGCTACG...GAAAATGTGCTGATACTTAGTAACTACCTCAGTTGTGAGGAATTTCCTTTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR GCA 90 bp AGTGGGTTCAAGAAATGGACCTATAGTGATCTTAGCTTATGTAATTCAACTCATCTCATTGCCGTTTCCTaGAGCCATCCTCTCATCGTT +
Preference number: 4 (lower is better)
Translates to: SGFKKWTYSDLSLCNSTHLIAVS*SHPLIV
Trigger: AACGATGAGAGGATGGCTGCAGGAAACGGCAATGAG...ATGAGTTGAATTACATAAGCTAAGATCACTATAGGTCCATTTCTTGAACCCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR GCA 90 bp AAAGCAGTAGTCTGCAGTCTCTTCCAACTATCACCAATAAATGAAGTACACATATACGTACATGTTACGTaGCAAGAAGGGACCCTGGTT +
Preference number: 4 (lower is better)
Translates to: KAVVCSLFQLSPINEVHIYVHVT*QEGTLV
Trigger: AACCAGGGTCCCTTCTTGGCACGTAACATGTACGTA...TATGTGTACTTCATTTATTGGTGATAGTTGGAAGAGACTGCAGACTACTGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp TGCTTTCTATCTTTCAAGGGGGATGATATCCAGAATCTTTTTCTAAATGGGTTATCTGTAAAGTGGTACTaGGAGTTCACCAGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: CFLSFKGDDIQNLFLNGLSVKWY*EFTRRN
Trigger: GTTCCGCCTGGTGAACTCCCAGTACCACTTTACAGA...TAACCCATTTAGAAAAAGATTCTGGATATCATCCCCCTTGAAAGATAGAAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp AGTGGGTTCAAGAAATGGACCTATAGTGATCTTAGCTTATGTAATTCAACTCATCAACAGATATGGCCATaGCCTTTGCCACTTCACCCA +
Preference number: 4 (lower is better)
Translates to: SGFKKWTYSDLSLCNSTHQQIWP*PLPLHP
Trigger: TGGGTGAAGTGGCAAAGGCCATGGCCATATCTGTTG...ATGAGTTGAATTACATAAGCTAAGATCACTATAGGTCCATTTCTTGAACCCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR TCA 90 bp AAAGCAGTAGTCTGCAGTCTCTTCCAACTATCACCAATAAATGAAGTACACATATCACTCGAAGAGCCATaGTTTGACGAAGGATCAGTA +
Preference number: 4 (lower is better)
Translates to: KAVVCSLFQLSPINEVHISLEEP*FDEGSV
Trigger: TACTGATCCTTCGTCAAATCATGGCTCTTCGAGTGA...TATGTGTACTTCATTTATTGGTGATAGTTGGAAGAGACTGCAGACTACTGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR GCA 90 bp CCTGAATGCTTTCTATCTTTCAAGGGGGATGATATCCAGAATCTTTTTCTAAATAGCGAAAGTACGGGCTaGTACAAAAGCACGAGTAAC +
Preference number: 4 (lower is better)
Translates to: PECFLSFKGDDIQNLFLNSESTG*YKSTSN
Trigger: GTTACTCGTGCTTTTGTAGCAGCCCGTACTTTCGCT...ATTTAGAAAAAGATTCTGGATATCATCCCCCTTGAAAGATAGAAAGCATTCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR GCA 90 bp TGCTTTCTATCTTTCAAGGGGGATGATATCCAGAATCTTTTTCTAAATGGGTTATGGATCGTAGCACATTaGTGTGAACCATGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: CFLSFKGDDIQNLFLNGLWIVAH*CEPWQV
Trigger: GACTTGCCATGGTTCACAGCAATGTGCTACGATCCA...TAACCCATTTAGAAAAAGATTCTGGATATCATCCCCCTTGAAAGATAGAAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp CCTGAATGCTTTCTATCTTTCAAGGGGGATGATATCCAGAATCTTTTTCTAAATCCTAAGTGGGCTCCTTaGCTGATATCTTGGATCGTA +
Preference number: 4 (lower is better)
Translates to: PECFLSFKGDDIQNLFLNPKWAP*LISWIV
Trigger: TACGATCCAAGATATCAGCCAAGGAGCCCACTTAGG...ATTTAGAAAAAGATTCTGGATATCATCCCCCTTGAAAGATAGAAAGCATTCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR TCA 90 bp CCTGAATGCTTTCTATCTTTCAAGGGGGATGATATCCAGAATCTTTTTCTAAATGCCTCTCATGATGTTTaGGCAGTAGTTGTAACATGG +
Preference number: 4 (lower is better)
Translates to: PECFLSFKGDDIQNLFLNASHDV*AVVVTW
Trigger: CCATGTTACAACTACTGCTCAAACATCATGAGAGGC...ATTTAGAAAAAGATTCTGGATATCATCCCCCTTGAAAGATAGAAAGCATTCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR TCA 90 bp TGCTTTCTATCTTTCAAGGGGGATGATATCCAGAATCTTTTTCTAAATGGGTTAATTGTAGTCAAACTCTaGAGGGCACTGCTGATACTC +
Preference number: 4 (lower is better)
Translates to: CFLSFKGDDIQNLFLNGLIVVKL*RALLIL
Trigger: GAGTATCAGCAGTGCCCTTCAGAGTTTGACTACAAT...TAACCCATTTAGAAAAAGATTCTGGATATCATCCCCCTTGAAAGATAGAAAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR GCA 90 bp TGCTTTCTATCTTTCAAGGGGGATGATATCCAGAATCTTTTTCTAAATGGGTTAGCTGCTCCGTATACTTaGTCACACATTCCAGATACT +
Preference number: 4 (lower is better)
Translates to: CFLSFKGDDIQNLFLNGLAAPYT*SHIPDT
Trigger: AGTATCTGGAATGTGTGAGCAAGTATACGGAGCAGC...TAACCCATTTAGAAAAAGATTCTGGATATCATCCCCCTTGAAAGATAGAAAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR GCA 90 bp AGTGGGTTCAAGAAATGGACCTATAGTGATCTTAGCTTATGTAATTCAACTCATACAGGTACCTGCTTTTaGCTTTCCCATTCCAACAGT +
Preference number: 4 (lower is better)
Translates to: SGFKKWTYSDLSLCNSTHTGTCF*LSHSNS
Trigger: ACTGTTGGAATGGGAAAGGCAAAAGCAGGTACCTGT...ATGAGTTGAATTACATAAGCTAAGATCACTATAGGTCCATTTCTTGAACCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR GCA 90 bp CCTGAATGCTTTCTATCTTTCAAGGGGGATGATATCCAGAATCTTTTTCTAAATCTGGGACATCCTGAATaGTTTCTATCTTTCAAGGGG +
Preference number: 4 (lower is better)
Translates to: PECFLSFKGDDIQNLFLNLGHPE*FLSFKG
Trigger: CCCCTTGAAAGATAGAAAGCATTCAGGATGTCCCAG...ATTTAGAAAAAGATTCTGGATATCATCCCCCTTGAAAGATAGAAAGCATTCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR TCA 90 bp TGCTTTCTATCTTTCAAGGGGGATGATATCCAGAATCTTTTTCTAAATGGGTTACCCAATATTCCATTTTaGCCACTCTGCAGAATTTGG +
Preference number: 4 (lower is better)
Translates to: CFLSFKGDDIQNLFLNGLPNIPF*PLCRIW
Trigger: CCAAATTCTGCAGAGTGGTCAAAATGGAATATTGGG...TAACCCATTTAGAAAAAGATTCTGGATATCATCCCCCTTGAAAGATAGAAAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR GCA 90 bp CTAAAAAGGAAATTCCTCACAACTGAGGTAGTTACTAAGTATCAGCACATTTTCCACAGACAAAAACTTTaGCCGAGTGTTGACAGCTAT +
Preference number: 4 (lower is better)
Translates to: LKRKFLTTEVVTKYQHIFHRQKL*PSVDSY
Trigger: ATAGCTGTCAACACTCGGGCAAAGTTTTTGTCTGTG...GAAAATGTGCTGATACTTAGTAACTACCTCAGTTGTGAGGAATTTCCTTTTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp CCTGAATGCTTTCTATCTTTCAAGGGGGATGATATCCAGAATCTTTTTCTAAATAGGACCAGAATTTCTTaGCCTGTTTCAGTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PECFLSFKGDDIQNLFLNRTRIS*PVSVSP
Trigger: AGGAGAAACTGAAACAGGCCAAGAAATTCTGGTCCT...ATTTAGAAAAAGATTCTGGATATCATCCCCCTTGAAAGATAGAAAGCATTCAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR TCA 90 bp CTAAAAAGGAAATTCCTCACAACTGAGGTAGTTACTAAGTATCAGCACATTTTCAAACTTCTTGTAACGTaGAGCAAAGACAGCTTGCAA +
Preference number: 4 (lower is better)
Translates to: LKRKFLTTEVVTKYQHIFKLLVT*SKDSLQ
Trigger: TTGCAAGCTGTCTTTGCTTCACGTTACAAGAAGTTT...GAAAATGTGCTGATACTTAGTAACTACCTCAGTTGTGAGGAATTTCCTTTTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR TCA 90 bp AAAGCAGTAGTCTGCAGTCTCTTCCAACTATCACCAATAAATGAAGTACACATAATCTTTCAAGGGGGATaGTATCCAGAATCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: KAVVCSLFQLSPINEVHIIFQGG*YPESFS
Trigger: AGAAAAAGATTCTGGATATCATCCCCCTTGAAAGAT...TATGTGTACTTCATTTATTGGTGATAGTTGGAAGAGACTGCAGACTACTGCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp CCTGAATGCTTTCTATCTTTCAAGGGGGATGATATCCAGAATCTTTTTCTAAATAGTGGGTTCAAGAAATaGACCTATAGTGATCTTAGC +
Preference number: 4 (lower is better)
Translates to: PECFLSFKGDDIQNLFLNSGFKK*TYSDLS
Trigger: GCTAAGATCACTATAGGTCCATTTCTTGAACCCACT...ATTTAGAAAAAGATTCTGGATATCATCCCCCTTGAAAGATAGAAAGCATTCAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR TCA 90 bp CTAAAAAGGAAATTCCTCACAACTGAGGTAGTTACTAAGTATCAGCACATTTTCCTTTTTCTCAGAGTTTaGGAATTATCTCCACTCTCT +
Preference number: 4 (lower is better)
Translates to: LKRKFLTTEVVTKYQHIFLFLRV*ELSPLS
Trigger: AGAGAGTGGAGATAATTCTCAAACTCTGAGAAAAAG...GAAAATGTGCTGATACTTAGTAACTACCTCAGTTGTGAGGAATTTCCTTTTTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CCA 90 bp AGTGGGTTCAAGAAATGGACCTATAGTGATCTTAGCTTATGTAATTCAACTCATCAAACAACCTCTTTGTaGGTTTTAGGTTCGGTAAAA +
Preference number: 4 (lower is better)
Translates to: SGFKKWTYSDLSLCNSTHQTTSL*VLGSVK
Trigger: TTTTACCGAACCTAAAACCCACAAAGAGGTTGTTTG...ATGAGTTGAATTACATAAGCTAAGATCACTATAGGTCCATTTCTTGAACCCACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS GCA 90 bp GGGGACCGCAGAGGGTGTGGGCGGCGGCGGGCGTTCGCTGCGCGCTaGTTGGGCTGCCCTGCGCTGGTCCGCTCGTCCGGCTGGACTCGG +
Preference number: 5 (lower is better)
Translates to: GDRRGCGRRRAFAAR*LGCPALVRSSGWTR
Trigger: CCGAGTCCAGCCGGACGAGCGGACCAGCGCAGGGCAGCCCAAGCAGCGCGCAGCGAACGCCCGCCGCCGCCCACACCCTCTGCGGTCCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CCA 90 bp GGCGGCGGCGGGCGTTCGCTGCGCGCTGCTTGGGCTGCCCTGCGCTaGTCCGCTCGTCCGGCTGGACTCGGCTCGGCTGACTCTGCCCTC +
Preference number: 5 (lower is better)
Translates to: GGGGRSLRAAWAALR*SARPAGLGSADSAL
Trigger: GAGGGCAGAGTCAGCCGAGCCGAGTCCAGCCGGACGAGCGGACCAGCGCAGGGCAGCCCAAGCAGCGCGCAGCGAACGCCCGCCGCCGCC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CCA 90 bp ACCGCAGAGGGTGTGGGCGGCGGCGGGCGTTCGCTGCGCGCTGCTTaGGCTGCCCTGCGCTGGTCCGCTCGTCCGGCTGGACTCGGCTCG +
Preference number: 5 (lower is better)
Translates to: TAEGVGGGGRSLRAA*AALRWSARPAGLGS
Trigger: CGAGCCGAGTCCAGCCGGACGAGCGGACCAGCGCAGGGCAGCCCAAGCAGCGCGCAGCGAACGCCCGCCGCCGCCCACACCCTCTGCGGT
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS TCA 90 bp GCGTGGAGGCGGCGCGCGGCCCAGGGAAGCAGAGGCGCGGGCTGGTaGCCTCGGGGTTTCGCGGGGCAGCGAACCCGGCAAGCTGACTGG +
Preference number: 5 (lower is better)
Translates to: AWRRRAAQGSRGAGW*PRGFAGQRTRQADW
Trigger: CCAGTCAGCTTGCCGGGTTCGCTGCCCCGCGAAACCCCGAGGTCACCAGCCCGCGCCTCTGCTTCCCTGGGCCGCGCGCCGCCTCCACGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS GCA 90 bp GTGTGGGCGGCGGCGGGCGTTCGCTGCGCGCTGCTTGGGCTGCCCTaGGCTGGTCCGCTCGTCCGGCTGGACTCGGCTCGGCTGACTCTG +
Preference number: 5 (lower is better)
Translates to: VWAAAGVRCALLGLP*AGPLVRLDSARLTL
Trigger: CAGAGTCAGCCGAGCCGAGTCCAGCCGGACGAGCGGACCAGCGCAGGGCAGCCCAAGCAGCGCGCAGCGAACGCCCGCCGCCGCCCACAC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CCA 90 bp CGAACCGTGCCATGGTGCGGGCCGGGGCGGACGCGTTCCCACCTTTaGGACCGGACGGGAAGCGGCGCTACGGCAGCGGGCCGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: RTVPWCGPGRTRSHL*DRTGSGATAAGRGL
Trigger: CAGCCCTCGGCCCGCTGCCGTAGCGCCGCTTCCCGTCCGGTCCCAAAGGTGGGAACGCGTCCGCCCCGGCCCGCACCATGGCACGGTTCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS GCA 90 bp CTGCCAGGGTGCAGAGAAGCGCGGGCAAGCCGAACCGTGCCATGGTaGGGGCCGGGGCGGACGCGTTCCCACCTTTGGGACCGGACGGGA +
Preference number: 5 (lower is better)
Translates to: LPGCREARASRTVPW*GPGRTRSHLWDRTG
Trigger: TCCCGTCCGGTCCCAAAGGTGGGAACGCGTCCGCCCCGGCCCGCACCATGGCACGGTTCGGCTTGCCCGCGCTTCTCTGCACCCTGGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CCA 90 bp GCACTGCCAGGGTGCAGAGAAGCGCGGGCAAGCCGAACCGTGCCATaGTGCGGGCCGGGGCGGACGCGTTCCCACCTTTGGGACCGGACG +
Preference number: 5 (lower is better)
Translates to: ALPGCREARASRTVP*CGPGRTRSHLWDRT
Trigger: CGTCCGGTCCCAAAGGTGGGAACGCGTCCGCCCCGGCCCGCACCATGGCACGGTTCGGCTTGCCCGCGCTTCTCTGCACCCTGGCAGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS GCA 90 bp GCTGAGCACTGCCAGGGTGCAGAGAAGCGCGGGCAAGCCGAACCGTaGCATGGTGCGGGCCGGGGCGGACGCGTTCCCACCTTTGGGACC +
Preference number: 5 (lower is better)
Translates to: AEHCQGAEKRGQAEP*HGAGRGGRVPTFGT
Trigger: GGTCCCAAAGGTGGGAACGCGTCCGCCCCGGCCCGCACCATGGCACGGTTCGGCTTGCCCGCGCTTCTCTGCACCCTGGCAGTGCTCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS GCA 90 bp ACTTTTCGACTTGAGCTCGGCAGCCAGCAGCGCGGCGCTGAGCACTaGCAGGGTGCAGAGAAGCGCGGGCAAGCCGAACCGTGCCATGGT +
Preference number: 5 (lower is better)
Translates to: TFRLELGSQQRGAEH*QGAEKRGQAEPCHG
Trigger: ACCATGGCACGGTTCGGCTTGCCCGCGCTTCTCTGCACCCTGGCAGTGCTCAGCGCCGCGCTGCTGGCTGCCGAGCTCAAGTCGAAAAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CCA 90 bp GACATCAGTAACCAGTCGGTCCAAACTAGTGCCAGCTGCTGTGGTTaGGCGTTCCTCGGGGTGATGTGGTCTGAAGCGAGCACTGAAGGC +
Preference number: 5 (lower is better)
Translates to: DISNQSVQTSASCCG*AFLGVMWSEASTEG
Trigger: GCCTTCAGTGCTCGCTTCAGACCACATCACCCCGAGGAACGCCCAACCACAGCAGCTGGCACTAGTTTGGACCGACTGGTTACTGATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CAA 90 bp GGGGGTGAGCTTGCCAGCTGCTTAGAAGCCAAGAGTTATCCAGTCAGACCTGAATGCCAGCTGCTGTGGTaGGGCGTTCCTCGGGGTGAT +
Preference number: 5 (lower is better)
Translates to: GGELASCLEAKSYPVRPECQLLW*GVPRGD
Trigger: ATCACCCCGAGGAACGCCCAACCACAGCAGCTGGCA...TTCAGGTCTGACTGGATAACTCTTGGCTTCTAAGCAGCTGGCAAGCTCACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS TCA 90 bp ACCACGGAGACCTTGCTCACGACATCTCCCGCAACCGCTAAGCCTTaGGCGAAAGTACGGGCTGCTACAAAAGCACGAGTAACCTGGAGC +
Preference number: 5 (lower is better)
Translates to: TTETLLTTSPATAKP*AKVRAATKARVTWS
Trigger: GCTCCAGGTTACTCGTGCTTTTGTAGCAGCCCGTACTTTCGCTCAAGGCTTAGCGGTTGCGGGAGATGTCGTGAGCAAGGTCTCCGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS TCA 90 bp CGGTCCAAACTAGTGCCAGCTGCTGTGGTTGGGCGTTCCTCGGGGTaGTGTGGTCTGAAGCGAGCACTGAAGGCACTTTCAGAGATGGAA +
Preference number: 5 (lower is better)
Translates to: RSKLVPAAVVGRSSG*CGLKRALKALSEME
Trigger: TTCCATCTCTGAAAGTGCCTTCAGTGCTCGCTTCAGACCACATCACCCCGAGGAACGCCCAACCACAGCAGCTGGCACTAGTTTGGACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS GCA 90 bp TTTCTCCTTGACATCAGTAACCAGTCGGTCCAAACTAGTGCCAGCTaGTGTGGTTGGGCGTTCCTCGGGGTGATGTGGTCTGAAGCGAGC +
Preference number: 5 (lower is better)
Translates to: FLLDISNQSVQTSAS*CGWAFLGVMWSEAS
Trigger: GCTCGCTTCAGACCACATCACCCCGAGGAACGCCCAACCACAGCAGCTGGCACTAGTTTGGACCGACTGGTTACTGATGTCAAGGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS GCA 90 bp CATAACCAGGAACAAGATGCAGAAGACAGTGAGGAGGTAGGCCTGTaGCCCAGGACGGACACCAGCACTGTCGGCTTTCTCATTGGCACT +
Preference number: 5 (lower is better)
Translates to: HNQEQDAEDSEEVGL*PRTDTSTVGFLIGT
Trigger: AGTGCCAATGAGAAAGCCGACAGTGCTGGTGTCCGTCCTGGGGCACAGGCCTACCTCCTCACTGTCTTCTGCATCTTGTTCCTGGTTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CCA 90 bp CAAACTAGTGCCAGCTGCTGTGGTTGGGCGTTCCTCGGGGTGATGTaGTCTGAAGCGAGCACTGAAGGCACTTTCAGAGATGGAACGAGA +
Preference number: 5 (lower is better)
Translates to: QTSASCCGWAFLGVM*SEASTEGTFRDGTR
Trigger: TCTCGTTCCATCTCTGAAAGTGCCTTCAGTGCTCGCTTCAGACCACATCACCCCGAGGAACGCCCAACCACAGCAGCTGGCACTAGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CAA 90 bp AAGAAGGGACCCTGGTTTGCTTGTAAGAAACAAGGCGAGATCACAGTTGGAAAAGACGCGTTCCCACCTTaGGGACCGGACGGGAAGCGG +
Preference number: 5 (lower is better)
Translates to: KKGPWFACKKQGEITVGKDAFPP*GPDGKR
Trigger: CCGCTTCCCGTCCGGTCCCAAAGGTGGGAACGCGTC...TTTTCCAACTGTGATCTCGCCTTGTTTCTTACAAGCAAACCAGGGTCCCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CAA 90 bp TTAGTCTTTGGCCTGGGACAACAGATATGGCCATGGCCTTTGCCACTTCACCCATTTACCACGGAGACCTaGCTCACGACATCTCCCGCA +
Preference number: 5 (lower is better)
Translates to: LVFGLGQQIWPWPLPLHPFTTET*LTTSPA
Trigger: TGCGGGAGATGTCGTGAGCAAGGTCTCCGTGGTAAA...TGGGTGAAGTGGCAAAGGCCATGGCCATATCTGTTGTCCCAGGCCAAAGACTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CCA 90 bp CTGGTTTGCTGGTGTCAACCTGGACCTCTGGGTTGTTGCCCTGGTTaGCTAATCCATTTCCTGTCACTGCAAACAGGTACCTGCTTTTGC +
Preference number: 5 (lower is better)
Translates to: LVCWCQPGPLGCCPG*LIHFLSLQTGTCFC
Trigger: GCAAAAGCAGGTACCTGTTTGCAGTGACAGGAAATGGATTAGCCAACCAGGGCAACAACCCAGAGGTCCAGGTTGACACCAGCAAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CCA 90 bp CAGCACTGTCGGCTTTCTCATTGGCACTCTTCCCAGCATGGTCAGTaGCATTGTAGTCAAACTCTGAAGGGCACTGCTGATACTCACAGC +
Preference number: 5 (lower is better)
Translates to: QHCRLSHWHSSQHGQ*HCSQTLKGTADTHS
Trigger: GCTGTGAGTATCAGCAGTGCCCTTCAGAGTTTGACTACAATGCCACTGACCATGCTGGGAAGAGTGCCAATGAGAAAGCCGACAGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS TCA 90 bp ATTGGCACTCTTCCCAGCATGGTCAGTGGCATTGTAGTCAAACTCTaGAGGGCACTGCTGATACTCACAGCCACTTCCACTTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: IGTLPSMVSGIVVKL*RALLILTATSTSFS
Trigger: GGAGAAGGAAGTGGAAGTGGCTGTGAGTATCAGCAGTGCCCTTCAGAGTTTGACTACAATGCCACTGACCATGCTGGGAAGAGTGCCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS GCA 90 bp CCTCATTGCCGTTTCCTGCAGCCATCCTCTCATCGTTGCAAACGTTaGTCGGAAGGGAGGACCAGAATTTCTTGGCCTGTTTCAGTTTCT +
Preference number: 5 (lower is better)
Translates to: PHCRFLQPSSHRCKR*SEGRTRISWPVSVS
Trigger: AGAAACTGAAACAGGCCAAGAAATTCTGGTCCTCCCTTCCGAGCAACGTTTGCAACGATGAGAGGATGGCTGCAGGAAACGGCAATGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS GCA 90 bp AACAGTCATCCTCATTGCCGTTTCCTGCAGCCATCCTCTCATCGTTaGAAACGTTGCTCGGAAGGGAGGACCAGAATTTCTTGGCCTGTT +
Preference number: 5 (lower is better)
Translates to: NSHPHCRFLQPSSHR*KRCSEGRTRISWPV
Trigger: AACAGGCCAAGAAATTCTGGTCCTCCCTTCCGAGCAACGTTTGCAACGATGAGAGGATGGCTGCAGGAAACGGCAATGAGGATGACTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS GCA 90 bp ACAGGTACCTGCTTTTGCCTTTCCCATTCCAACAGTCATCCTCATTaGCGTTTCCTGCAGCCATCCTCTCATCGTTGCAAACGTTGCTCG +
Preference number: 5 (lower is better)
Translates to: TGTCFCLSHSNSHPH*RFLQPSSHRCKRCS
Trigger: CGAGCAACGTTTGCAACGATGAGAGGATGGCTGCAGGAAACGGCAATGAGGATGACTGTTGGAATGGGAAAGGCAAAAGCAGGTACCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CCA 90 bp ATGTCTGGTTTGCTGGTGTCAACCTGGACCTCTGGGTTGTTGCCCTaGTTGGCTAATCCATTTCCTGTCACTGCAAACAGGTACCTGCTT +
Preference number: 5 (lower is better)
Translates to: MSGLLVSTWTSGLLP*LANPFPVTANRYLL
Trigger: AAGCAGGTACCTGTTTGCAGTGACAGGAAATGGATTAGCCAACCAGGGCAACAACCCAGAGGTCCAGGTTGACACCAGCAAACCAGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CCA 90 bp GGTCATCACTCGAAGAGCCATGATTTGACGAAGGATCAGTATGTCTaGTTTGCTGGTGTCAACCTGGACCTCTGGGTTGTTGCCCTGGTT +
Preference number: 5 (lower is better)
Translates to: GHHSKSHDLTKDQYV*FAGVNLDLWVVALV
Trigger: AACCAGGGCAACAACCCAGAGGTCCAGGTTGACACCAGCAAACCAGACATACTGATCCTTCGTCAAATCATGGCTCTTCGAGTGATGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CAA 90 bp ACAAGGAAGGGATTCCCAAGGCAGTTGTTAGTCTTTGGCCTGGGACAACAGATAACCTGGACCTCTGGGTaGTTGCCCTGGTTGGCTAAT +
Preference number: 5 (lower is better)
Translates to: TRKGFPRQLLVFGLGQQITWTSG*LPWLAN
Trigger: ATTAGCCAACCAGGGCAACAACCCAGAGGTCCAGGT...TATCTGTTGTCCCAGGCCAAAGACTAACAACTGCCTTGGGAATCCCTTCCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CAA 90 bp TTAGTCTTTGGCCTGGGACAACAGATATGGCCATGGCCTTTGCCACTTCACCCAATCAGTATGTCTGGTTaGCTGGTGTCAACCTGGACC +
Preference number: 5 (lower is better)
Translates to: LVFGLGQQIWPWPLPLHPISMSG*LVSTWT
Trigger: GGTCCAGGTTGACACCAGCAAACCAGACATACTGAT...TGGGTGAAGTGGCAAAGGCCATGGCCATATCTGTTGTCCCAGGCCAAAGACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CAA 90 bp TTAGTCTTTGGCCTGGGACAACAGATATGGCCATGGCCTTTGCCACTTCACCCAAGAAGGGACCCTGGTTaGCTTGTAAGAAACAAGGCG +
Preference number: 5 (lower is better)
Translates to: LVFGLGQQIWPWPLPLHPRRDPG*LVRNKA
Trigger: CGCCTTGTTTCTTACAAGCAAACCAGGGTCCCTTCT...TGGGTGAAGTGGCAAAGGCCATGGCCATATCTGTTGTCCCAGGCCAAAGACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CAA 90 bp ACAAGGAAGGGATTCCCAAGGCAGTTGTTAGTCTTTGGCCTGGGACAACAGATAACCTGGAGCTTCAATTaGCGAGGGACATCTCCGAAG +
Preference number: 5 (lower is better)
Translates to: TRKGFPRQLLVFGLGQQITWSFN*RGTSPK
Trigger: CTTCGGAGATGTCCCTCGCAAATTGAAGCTCCAGGT...TATCTGTTGTCCCAGGCCAAAGACTAACAACTGCCTTGGGAATCCCTTCCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CAA 90 bp GCACATTGCTGTGAACCATGGCAAGTCCTTTGTTTTACTGATAAGAGGGGGCTATCGAGATCCCCTTGGTaGGCCAAACAGCCTCTCATG +
Preference number: 5 (lower is better)
Translates to: AHCCEPWQVLCFTDKRGLSRSPW*AKQPLM
Trigger: CATGAGAGGCTGTTTGGCCAACCAAGGGGATCTCGA...TAGCCCCCTCTTATCAGTAAAACAAAGGACTTGCCATGGTTCACAGCAATGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CAA 90 bp GCACATTGCTGTGAACCATGGCAAGTCCTTTGTTTTACTGATAAGAGGGGGCTATCATCGTTGCAAACGTaGCTCGGAAGGGAGGACCAG +
Preference number: 5 (lower is better)
Translates to: AHCCEPWQVLCFTDKRGLSSLQT*LGREDQ
Trigger: CTGGTCCTCCCTTCCGAGCAACGTTTGCAACGATGA...TAGCCCCCTCTTATCAGTAAAACAAAGGACTTGCCATGGTTCACAGCAATGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CAA 90 bp GCACATTGCTGTGAACCATGGCAAGTCCTTTGTTTTACTGATAAGAGGGGGCTAGCCATCCTCTCATCGTaGCAAACGTTGCTCGGAAGG +
Preference number: 5 (lower is better)
Translates to: AHCCEPWQVLCFTDKRGLAILSS*QTLLGR
Trigger: CCTTCCGAGCAACGTTTGCAACGATGAGAGGATGGC...TAGCCCCCTCTTATCAGTAAAACAAAGGACTTGCCATGGTTCACAGCAATGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CAA 90 bp GGGGGTGAGCTTGCCAGCTGCTTAGAAGCCAAGAGTTATCCAGTCAGACCTGAATCGAAGAGCCATGATTaGACGAAGGATCAGTATGTC +
Preference number: 5 (lower is better)
Translates to: GGELASCLEAKSYPVRPESKSHD*TKDQYV
Trigger: GACATACTGATCCTTCGTCAAATCATGGCTCTTCGA...TTCAGGTCTGACTGGATAACTCTTGGCTTCTAAGCAGCTGGCAAGCTCACCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CAA 90 bp ACAAGGAAGGGATTCCCAAGGCAGTTGTTAGTCTTTGGCCTGGGACAACAGATAAAAATCGAGATCCCCTaGGTTGGCCAAACAGCCTCT +
Preference number: 5 (lower is better)
Translates to: TRKGFPRQLLVFGLGQQIKIEIP*VGQTAS
Trigger: AGAGGCTGTTTGGCCAACCAAGGGGATCTCGATTTT...TATCTGTTGTCCCAGGCCAAAGACTAACAACTGCCTTGGGAATCCCTTCCTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CAA 90 bp GTTGTTAGTCTTTGGCCTGGGACAACAGATATGGCCATGGCCTTTGCCACTTCAGAGGACCAGAATTTCTaGGCCTGTTTCAGTTTCTCC +
Preference number: 5 (lower is better)
Translates to: VVSLWPGTTDMAMAFATSEDQNF*ACFSFS
Trigger: GGAGAAACTGAAACAGGCCAAGAAATTCTGGTCCTC...TGAAGTGGCAAAGGCCATGGCCATATCTGTTGTCCCAGGCCAAAGACTAACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CAA 90 bp GCACATTGCTGTGAACCATGGCAAGTCCTTTGTTTTACTGATAAGAGGGGGCTACAACAGTCATCCTCATaGCCGTTTCCTGCAGCCATC +
Preference number: 5 (lower is better)
Translates to: AHCCEPWQVLCFTDKRGLQQSSS*PFPAAI
Trigger: GATGGCTGCAGGAAACGGCAATGAGGATGACTGTTG...TAGCCCCCTCTTATCAGTAAAACAAAGGACTTGCCATGGTTCACAGCAATGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CAA 90 bp CTGATATCTTGGATCGTAGCACATTGCTGTGAACCATGGCAAGTCCTTTGTTTTATATGGCCATGGCCTTaGCCACTTCACCCACGTGGC +
Preference number: 5 (lower is better)
Translates to: LISWIVAHCCEPWQVLCFIWPWP*PLHPRG
Trigger: GCCACGTGGGTGAAGTGGCAAAGGCCATGGCCATAT...AAAACAAAGGACTTGCCATGGTTCACAGCAATGTGCTACGATCCAAGATATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CAA 90 bp CTCTCAGACAGCTCCCTGTACATAATTGGGTTTGAAATCTCGACCACTCTAACAGGGTTGTTGCCCTGGTaGGCTAATCCATTTCCTGTC +
Preference number: 5 (lower is better)
Translates to: LSDSSLYIIGFEISTTLTGLLPW*ANPFPV
Trigger: GACAGGAAATGGATTAGCCAACCAGGGCAACAACCC...TGTTAGAGTGGTCGAGATTTCAAACCCAATTATGTACAGGGAGCTGTCTGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CAA 90 bp TTAGTCTTTGGCCTGGGACAACAGATATGGCCATGGCCTTTGCCACTTCACCCATATGCATTCTTCATCTaGCTGGTCATCACTCGAAGA +
Preference number: 5 (lower is better)
Translates to: LVFGLGQQIWPWPLPLHPYAFFI*LVITRR
Trigger: TCTTCGAGTGATGACCAGCAAGATGAAGAATGCATA...TGGGTGAAGTGGCAAAGGCCATGGCCATATCTGTTGTCCCAGGCCAAAGACTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CAA 90 bp AAGAAGGGACCCTGGTTTGCTTGTAAGAAACAAGGCGAGATCACAGTTGGAAAAGGATTCCCAAGGCAGTaGTTAGTCTTTGGCCTGGGA +
Preference number: 5 (lower is better)
Translates to: KKGPWFACKKQGEITVGKGFPRQ*LVFGLG
Trigger: TCCCAGGCCAAAGACTAACAACTGCCTTGGGAATCC...TTTTCCAACTGTGATCTCGCCTTGTTTCTTACAAGCAAACCAGGGTCCCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS TCA 90 bp TCCATTCAAAATCGAGATCCCCTTGGTTGGCCAAACAGCCTCTCATaGTGTTTGAGCAGTAGTTGTAACATGGCTTCACAGTCACGAGAC +
Preference number: 5 (lower is better)
Translates to: SIQNRDPLGWPNSLS*CLSSSCNMASQSRD
Trigger: GTCTCGTGACTGTGAAGCCATGTTACAACTACTGCTCAAACATCATGAGAGGCTGTTTGGCCAACCAAGGGGATCTCGATTTTGAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS TCA 90 bp TATGCATTCTTCATCTTGCTGGTCATCACTCGAAGAGCCATGATTTaGCGAAGGATCAGTATGTCTGGTTTGCTGGTGTCAACCTGGACC +
Preference number: 5 (lower is better)
Translates to: YAFFILLVITRRAMI*RRISMSGLLVSTWT
Trigger: GGTCCAGGTTGACACCAGCAAACCAGACATACTGATCCTTCGTCAAATCATGGCTCTTCGAGTGATGACCAGCAAGATGAAGAATGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CAA 90 bp GCACATTGCTGTGAACCATGGCAAGTCCTTTGTTTTACTGATAAGAGGGGGCTATCCTTGGCTGATATCTaGGATCGTAGCACATTGCTG +
Preference number: 5 (lower is better)
Translates to: AHCCEPWQVLCFTDKRGLSLADI*DRSTLL
Trigger: CAGCAATGTGCTACGATCCAAGATATCAGCCAAGGA...TAGCCCCCTCTTATCAGTAAAACAAAGGACTTGCCATGGTTCACAGCAATGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CAA 90 bp GGGGGTGAGCTTGCCAGCTGCTTAGAAGCCAAGAGTTATCCAGTCAGACCTGAAATTGGTTTAGAGAATTaGACTGGAAGAAAACAGCTG +
Preference number: 5 (lower is better)
Translates to: GGELASCLEAKSYPVRPEIGLEN*TGRKQL
Trigger: CAGCTGTTTTCTTCCAGTCAAATTCTCTAAACCAAT...TTCAGGTCTGACTGGATAACTCTTGGCTTCTAAGCAGCTGGCAAGCTCACCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CAA 90 bp TGCTTTCTATCTTTCAAGGGGGATGATATCCAGAATCTTTTTCTAAATGGGTTAGAGCAACTTTTCGACTaGAGCTCGGCAGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: CFLSFKGDDIQNLFLNGLEQLFD*SSAASS
Trigger: GCTGCTGGCTGCCGAGCTCAAGTCGAAAAGTTGCTC...TAACCCATTTAGAAAAAGATTCTGGATATCATCCCCCTTGAAAGATAGAAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CAA 90 bp AAAGCAGTAGTCTGCAGTCTCTTCCAACTATCACCAATAAATGAAGTACACATACTGTCGGCTTTCTCATaGGCACTCTTCCCAGCATGG +
Preference number: 5 (lower is better)
Translates to: KAVVCSLFQLSPINEVHILSAFS*ALFPAW
Trigger: CCATGCTGGGAAGAGTGCCAATGAGAAAGCCGACAG...TATGTGTACTTCATTTATTGGTGATAGTTGGAAGAGACTGCAGACTACTGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CAA 90 bp AGTGGGTTCAAGAAATGGACCTATAGTGATCTTAGCTTATGTAATTCAACTCATTGGACCTCTGGGTTGTaGCCCTGGTTGGCTAATCCA +
Preference number: 5 (lower is better)
Translates to: SGFKKWTYSDLSLCNSTHWTSGL*PWLANP
Trigger: TGGATTAGCCAACCAGGGCAACAACCCAGAGGTCCA...ATGAGTTGAATTACATAAGCTAAGATCACTATAGGTCCATTTCTTGAACCCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CAA 90 bp CTAAAAAGGAAATTCCTCACAACTGAGGTAGTTACTAAGTATCAGCACATTTTCGGCTCAGAAGCCTGCTaGTGCCCTCACATTCTGTCT +
Preference number: 5 (lower is better)
Translates to: LKRKFLTTEVVTKYQHIFGSEAC*CPHILS
Trigger: AGACAGAATGTGAGGGCACAAGCAGGCTTCTGAGCC...GAAAATGTGCTGATACTTAGTAACTACCTCAGTTGTGAGGAATTTCCTTTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS GCA 90 bp ACTTTCATCACTGATATCAAAGAAGTCCACGTCGTTCCCATTGTATaGATTCTTCATCTTGCTGGTCATCACTCGAAGAGCCATGATTTG +
Preference number: 5 (lower is better)
Translates to: TFITDIKEVHVVPIV*ILHLAGHHSKSHDL
Trigger: CAAATCATGGCTCTTCGAGTGATGACCAGCAAGATGAAGAATGCATACAATGGGAACGACGTGGACTTCTTTGATATCAGTGATGAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CAA 90 bp CTGATATCTTGGATCGTAGCACATTGCTGTGAACCATGGCAAGTCCTTTGTTTTTTTATGAGCTATCATTaGGTAAGGACACAAGGAAGG +
Preference number: 5 (lower is better)
Translates to: LISWIVAHCCEPWQVLCFFMSYH*VRTQGR
Trigger: CCTTCCTTGTGTCCTTACCAAATGATAGCTCATAAA...AAAACAAAGGACTTGCCATGGTTCACAGCAATGTGCTACGATCCAAGATATCAG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CAA 90 bp ACACAAGCCCTTCACATGCTGTTAACTTTGGAAAAGTCAGGTCTTCTCCTAACAACTTTTTCTCAGAGTTaGAGAATTATCTCCACTCTC +
Preference number: 5 (lower is better)
Translates to: TQALHMLLTLEKSGLLLTTFSQS*RIISTL
Trigger: GAGAGTGGAGATAATTCTCAAACTCTGAGAAAAAGT...TGTTAGGAGAAGACCTGACTTTTCCAAAGTTAACAGCATGTGAAGGGCTTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CAA 90 bp ACACAAGCCCTTCACATGCTGTTAACTTTGGAAAAGTCAGGTCTTCTCCTAACACTTCTGGGAACTCCTTaGAAAGTGATTTGTTACATT +
Preference number: 5 (lower is better)
Translates to: TQALHMLLTLEKSGLLLTLLGTP*KVICYI
Trigger: AATGTAACAAATCACTTTCAAAGGAGTTCCCAGAAG...TGTTAGGAGAAGACCTGACTTTTCCAAAGTTAACAGCATGTGAAGGGCTTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CAA 90 bp AAAGCAGTAGTCTGCAGTCTCTTCCAACTATCACCAATAAATGAAGTACACATAACACAAACAACCTCTTaGTGGGTTTTAGGTTCGGTA +
Preference number: 5 (lower is better)
Translates to: KAVVCSLFQLSPINEVHITQTTS*WVLGSV
Trigger: TACCGAACCTAAAACCCACAAAGAGGTTGTTTGTGT...TATGTGTACTTCATTTATTGGTGATAGTTGGAAGAGACTGCAGACTACTGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CAA 90 bp AAAGCAGTAGTCTGCAGTCTCTTCCAACTATCACCAATAAATGAAGTACACATACACATGCTGTTAACTTaGGAAAAGTCAGGTCTTCTC +
Preference number: 5 (lower is better)
Translates to: KAVVCSLFQLSPINEVHIHMLLT*EKSGLL
Trigger: GAGAAGACCTGACTTTTCCAAAGTTAACAGCATGTG...TATGTGTACTTCATTTATTGGTGATAGTTGGAAGAGACTGCAGACTACTGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS-3UTR CAA 90 bp CTAAAAAGGAAATTCCTCACAACTGAGGTAGTTACTAAGTATCAGCACATTTTCTCTCTGAGCCATATTTaGGAGACCAGATTCATTTCT +
Preference number: 5 (lower is better)
Translates to: LKRKFLTTEVVTKYQHIFSLSHI*ETRFIS
Trigger: AGAAATGAATCTGGTCTCCAAAATATGGCTCAGAGA...GAAAATGTGCTGATACTTAGTAACTACCTCAGTTGTGAGGAATTTCCTTTTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS GCA 72 bp GGGCGGCGGCGGGCGTTCGCTGCGCGCTGCTTGGGCTaGCCTGCGCTGGTCCGCTCGTCCGGCTGGACTCGG +
Preference number: 6 (lower is better)
Translates to: GRRRAFAARCLG*PALVRSSGWTR
Trigger: CCGAGTCCAGCCGGACGAGCGGACCAGCGCAGGGCAGCCCAAGCAGCGCGCAGCGAACGCCCGCCGCCGCCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CAA 72 bp GGGTGTGGGCGGCGGCGGGCGTTCGCTGCGCGCTGCTaGGGCTGCCCTGCGCTGGTCCGCTCGTCCGGCTGG +
Preference number: 6 (lower is better)
Translates to: GCGRRRAFAARC*GCPALVRSSGW
Trigger: CCAGCCGGACGAGCGGACCAGCGCAGGGCAGCCCAAGCAGCGCGCAGCGAACGCCCGCCGCCGCCCACACCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS GCA 72 bp GCGGCGGGCGTTCGCTGCGCGCTGCTTGGGCTGCCCTaGGCTGGTCCGCTCGTCCGGCTGGACTCGGCTCGG +
Preference number: 6 (lower is better)
Translates to: AAGVRCALLGLP*AGPLVRLDSAR
Trigger: CCGAGCCGAGTCCAGCCGGACGAGCGGACCAGCGCAGGGCAGCCCAAGCAGCGCGCAGCGAACGCCCGCCGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS GCA 72 bp AGAGGGTGTGGGCGGCGGCGGGCGTTCGCTGCGCGCTaGTTGGGCTGCCCTGCGCTGGTCCGCTCGTCCGGC +
Preference number: 6 (lower is better)
Translates to: RGCGRRRAFAAR*LGCPALVRSSG
Trigger: GCCGGACGAGCGGACCAGCGCAGGGCAGCCCAAGCAGCGCGCAGCGAACGCCCGCCGCCGCCCACACCCTCT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS GCA 72 bp GGACCGCAGAGGGTGTGGGCGGCGGCGGGCGTTCGCTaGGCGCTGCTTGGGCTGCCCTGCGCTGGTCCGCTC +
Preference number: 6 (lower is better)
Translates to: GPQRVWAAAGVR*ALLGLPCAGPL
Trigger: GAGCGGACCAGCGCAGGGCAGCCCAAGCAGCGCGCAGCGAACGCCCGCCGCCGCCCACACCCTCTGCGGTCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CAA 90 bp GACCGCAGAGGGTGTGGGCGGCGGCGGGCGTTCGCTGCGCGCTGCTaGGGCTGCCCTGCGCTGGTCCGCTCGTCCGGCTGGACTCGGCTC +
Preference number: 6 (lower is better)
Translates to: DRRGCGRRRAFAARC*GCPALVRSSGWTRL
Trigger: GAGCCGAGTCCAGCCGGACGAGCGGACCAGCGCAGGGCAGCCCAAGCAGCGCGCAGCGAACGCCCGCCGCCGCCCACACCCTCTGCGGTC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CAA 90 bp CCGAACCGTGCCATGGTGCGGGCCGGGGCGGACGCGTTCCCACCTTaGGGACCGGACGGGAAGCGGCGCTACGGCAGCGGGCCGAGGGCT +
Preference number: 6 (lower is better)
Translates to: PNRAMVRAGADAFPP*GPDGKRRYGSGPRA
Trigger: AGCCCTCGGCCCGCTGCCGTAGCGCCGCTTCCCGTCCGGTCCCAAAGGTGGGAACGCGTCCGCCCCGGCCCGCACCATGGCACGGTTCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS TCA 72 bp CGGCGCGCGGCCCAGGGAAGCAGAGGCGCGGGCTGGTaGCCTCGGGGTTTCGCGGGGCAGCGAACCCGGCAA +
Preference number: 6 (lower is better)
Translates to: RRAAQGSRGAGW*PRGFAGQRTRQ
Trigger: TTGCCGGGTTCGCTGCCCCGCGAAACCCCGAGGTCACCAGCCCGCGCCTCTGCTTCCCTGGGCCGCGCGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CCA 72 bp CCATGGTGCGGGCCGGGGCGGACGCGTTCCCACCTTTaGGACCGGACGGGAAGCGGCGCTACGGCAGCGGGC +
Preference number: 6 (lower is better)
Translates to: PWCGPGRTRSHL*DRTGSGATAAG
Trigger: GCCCGCTGCCGTAGCGCCGCTTCCCGTCCGGTCCCAAAGGTGGGAACGCGTCCGCCCCGGCCCGCACCATGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CAA 72 bp GCCATGGTGCGGGCCGGGGCGGACGCGTTCCCACCTTaGGGACCGGACGGGAAGCGGCGCTACGGCAGCGGG +
Preference number: 6 (lower is better)
Translates to: AMVRAGADAFPP*GPDGKRRYGSG
Trigger: CCCGCTGCCGTAGCGCCGCTTCCCGTCCGGTCCCAAAGGTGGGAACGCGTCCGCCCCGGCCCGCACCATGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS GCA 72 bp GTAGAGCTGGGCCTCGCGTCAGGCAACGGTCCCCGGTaGCAGGCGCCGGGCCAGGGGAGAAGGAGGGCGTGG +
Preference number: 6 (lower is better)
Translates to: VELGLASGNGPR*QAPGQGRRRAW
Trigger: CCACGCCCTCCTTCTCCCCTGGCCCGGCGCCTGGCACCGGGGACCGTTGCCTGACGCGAGGCCCAGCTCTAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CCA 72 bp GGACGGGAAGCGGCGCTACGGCAGCGGGCCGAGGGCTaGCGGAGTCGGGGACTAGCGAGTGGAGCTGGAGGG +
Preference number: 6 (lower is better)
Translates to: GREAALRQRAEG*RSRGLASGAGG
Trigger: CCCTCCAGCTCCACTCGCTAGTCCCCGACTCCGCCAGCCCTCGGCCCGCTGCCGTAGCGCCGCTTCCCGTCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS GCA 72 bp TGCCAGGGTGCAGAGAAGCGCGGGCAAGCCGAACCGTaGCATGGTGCGGGCCGGGGCGGACGCGTTCCCACC +
Preference number: 6 (lower is better)
Translates to: CQGAEKRGQAEP*HGAGRGGRVPT
Trigger: GGTGGGAACGCGTCCGCCCCGGCCCGCACCATGGCACGGTTCGGCTTGCCCGCGCTTCTCTGCACCCTGGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CCA 72 bp GGGTGCAGAGAAGCGCGGGCAAGCCGAACCGTGCCATaGTGCGGGCCGGGGCGGACGCGTTCCCACCTTTGG +
Preference number: 6 (lower is better)
Translates to: GCREARASRTVP*CGPGRTRSHLW
Trigger: CCAAAGGTGGGAACGCGTCCGCCCCGGCCCGCACCATGGCACGGTTCGGCTTGCCCGCGCTTCTCTGCACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS GCA 72 bp TGCAGAGAAGCGCGGGCAAGCCGAACCGTGCCATGGTaGGGGCCGGGGCGGACGCGTTCCCACCTTTGGGAC +
Preference number: 6 (lower is better)
Translates to: CREARASRTVPW*GPGRTRSHLWD
Trigger: GTCCCAAAGGTGGGAACGCGTCCGCCCCGGCCCGCACCATGGCACGGTTCGGCTTGCCCGCGCTTCTCTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CCA 72 bp CGGGGACTAGCGAGTGGAGCTGGAGGGAGAAGGAGTTaGAGTTGGTGGAAGAGGCGAGCAGGCGGAGGAGAC +
Preference number: 6 (lower is better)
Translates to: RGLASGAGGRRS*SWWKRRAGGGD
Trigger: GTCTCCTCCGCCTGCTCGCCTCTTCCACCAACTCCAACTCCTTCTCCCTCCAGCTCCACTCGCTAGTCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CCA 72 bp AACCAGTCGGTCCAAACTAGTGCCAGCTGCTGTGGTTaGGCGTTCCTCGGGGTGATGTGGTCTGAAGCGAGC +
Preference number: 6 (lower is better)
Translates to: NQSVQTSASCCG*AFLGVMWSEAS
Trigger: GCTCGCTTCAGACCACATCACCCCGAGGAACGCCCAACCACAGCAGCTGGCACTAGTTTGGACCGACTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS TCA 72 bp CTAGTGCCAGCTGCTGTGGTTGGGCGTTCCTCGGGGTaGTGTGGTCTGAAGCGAGCACTGAAGGCACTTTCA +
Preference number: 6 (lower is better)
Translates to: LVPAAVVGRSSG*CGLKRALKALS
Trigger: TGAAAGTGCCTTCAGTGCTCGCTTCAGACCACATCACCCCGAGGAACGCCCAACCACAGCAGCTGGCACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CCA 72 bp GCCAGCTGCTGTGGTTGGGCGTTCCTCGGGGTGATGTaGTCTGAAGCGAGCACTGAAGGCACTTTCAGAGAT +
Preference number: 6 (lower is better)
Translates to: ASCCGWAFLGVM*SEASTEGTFRD
Trigger: ATCTCTGAAAGTGCCTTCAGTGCTCGCTTCAGACCACATCACCCCGAGGAACGCCCAACCACAGCAGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS GCA 72 bp GACATCAGTAACCAGTCGGTCCAAACTAGTGCCAGCTaGTGTGGTTGGGCGTTCCTCGGGGTGATGTGGTCT +
Preference number: 6 (lower is better)
Translates to: DISNQSVQTSAS*CGWAFLGVMWS
Trigger: AGACCACATCACCCCGAGGAACGCCCAACCACAGCAGCTGGCACTAGTTTGGACCGACTGGTTACTGATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS TCA 72 bp ACCTTGCTCACGACATCTCCCGCAACCGCTAAGCCTTaGGCGAAAGTACGGGCTGCTACAAAAGCACGAGTA +
Preference number: 6 (lower is better)
Translates to: TLLTTSPATAKP*AKVRAATKARV
Trigger: TACTCGTGCTTTTGTAGCAGCCCGTACTTTCGCTCAAGGCTTAGCGGTTGCGGGAGATGTCGTGAGCAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CAA 72 bp GCTGCTACAAAAGCACGAGTAACCTGGAGCTTCAATTaGCGAGGGACATCTCCGAAGGGCTTCAGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: AATKARVTWSFN*RGTSPKGFSCS
Trigger: GGAGCAGCTGAAGCCCTTCGGAGATGTCCCTCGCAAATTGAAGCTCCAGGTTACTCGTGCTTTTGTAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CAA 72 bp CCGTTTCCTGCAGCCATCCTCTCATCGTTGCAAACGTaGCTCGGAAGGGAGGACCAGAATTTCTTGGCCTGT +
Preference number: 6 (lower is better)
Translates to: PFPAAILSSLQT*LGREDQNFLAC
Trigger: ACAGGCCAAGAAATTCTGGTCCTCCCTTCCGAGCAACGTTTGCAACGATGAGAGGATGGCTGCAGGAAACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS GCA 72 bp CGTTTCCTGCAGCCATCCTCTCATCGTTGCAAACGTTaGTCGGAAGGGAGGACCAGAATTTCTTGGCCTGTT +
Preference number: 6 (lower is better)
Translates to: RFLQPSSHRCKR*SEGRTRISWPV
Trigger: AACAGGCCAAGAAATTCTGGTCCTCCCTTCCGAGCAACGTTTGCAACGATGAGAGGATGGCTGCAGGAAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS GCA 72 bp CCTCATTGCCGTTTCCTGCAGCCATCCTCTCATCGTTaGAAACGTTGCTCGGAAGGGAGGACCAGAATTTCT +
Preference number: 6 (lower is better)
Translates to: PHCRFLQPSSHR*KRCSEGRTRIS
Trigger: AGAAATTCTGGTCCTCCCTTCCGAGCAACGTTTGCAACGATGAGAGGATGGCTGCAGGAAACGGCAATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CCA 72 bp TGGTGTCAACCTGGACCTCTGGGTTGTTGCCCTGGTTaGCTAATCCATTTCCTGTCACTGCAAACAGGTACC +
Preference number: 6 (lower is better)
Translates to: WCQPGPLGCCPG*LIHFLSLQTGT
Trigger: GGTACCTGTTTGCAGTGACAGGAAATGGATTAGCCAACCAGGGCAACAACCCAGAGGTCCAGGTTGACACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CCA 72 bp TTGCTGGTGTCAACCTGGACCTCTGGGTTGTTGCCCTaGTTGGCTAATCCATTTCCTGTCACTGCAAACAGG +
Preference number: 6 (lower is better)
Translates to: LLVSTWTSGLLP*LANPFPVTANR
Trigger: CCTGTTTGCAGTGACAGGAAATGGATTAGCCAACCAGGGCAACAACCCAGAGGTCCAGGTTGACACCAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CCA 72 bp CGAAGGATCAGTATGTCTGGTTTGCTGGTGTCAACCTaGACCTCTGGGTTGTTGCCCTGGTTGGCTAATCCA +
Preference number: 6 (lower is better)
Translates to: RRISMSGLLVST*TSGLLPWLANP
Trigger: TGGATTAGCCAACCAGGGCAACAACCCAGAGGTCCAGGTTGACACCAGCAAACCAGACATACTGATCCTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CAA 72 bp TCCTCATTGCCGTTTCCTGCAGCCATCCTCTCATCGTaGCAAACGTTGCTCGGAAGGGAGGACCAGAATTTC +
Preference number: 6 (lower is better)
Translates to: SSLPFPAAILSS*QTLLGREDQNF
Trigger: GAAATTCTGGTCCTCCCTTCCGAGCAACGTTTGCAACGATGAGAGGATGGCTGCAGGAAACGGCAATGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CAA 72 bp CTGGTGTCAACCTGGACCTCTGGGTTGTTGCCCTGGTaGGCTAATCCATTTCCTGTCACTGCAAACAGGTAC +
Preference number: 6 (lower is better)
Translates to: LVSTWTSGLLPW*ANPFPVTANRY
Trigger: GTACCTGTTTGCAGTGACAGGAAATGGATTAGCCAACCAGGGCAACAACCCAGAGGTCCAGGTTGACACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CAA 72 bp TCTGGTTTGCTGGTGTCAACCTGGACCTCTGGGTTGTaGCCCTGGTTGGCTAATCCATTTCCTGTCACTGCA +
Preference number: 6 (lower is better)
Translates to: SGLLVSTWTSGL*PWLANPFPVTA
Trigger: TGCAGTGACAGGAAATGGATTAGCCAACCAGGGCAACAACCCAGAGGTCCAGGTTGACACCAGCAAACCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CAA 90 bp CAACAGTCATCCTCATTGCCGTTTCCTGCAGCCATCCTCTCATCGTaGCAAACGTTGCTCGGAAGGGAGGACCAGAATTTCTTGGCCTGT +
Preference number: 6 (lower is better)
Translates to: QQSSSLPFPAAILSS*QTLLGREDQNFLAC
Trigger: ACAGGCCAAGAAATTCTGGTCCTCCCTTCCGAGCAACGTTTGCAACGATGAGAGGATGGCTGCAGGAAACGGCAATGAGGATGACTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CAA 90 bp AAAGTACGGGCTGCTACAAAAGCACGAGTAACCTGGAGCTTCAATTaGCGAGGGACATCTCCGAAGGGCTTCAGCTGCTCCGTATACTTG +
Preference number: 6 (lower is better)
Translates to: KVRAATKARVTWSFN*RGTSPKGFSCSVYL
Trigger: CAAGTATACGGAGCAGCTGAAGCCCTTCGGAGATGTCCCTCGCAAATTGAAGCTCCAGGTTACTCGTGCTTTTGTAGCAGCCCGTACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CAA 90 bp TCCTCATTGCCGTTTCCTGCAGCCATCCTCTCATCGTTGCAAACGTaGCTCGGAAGGGAGGACCAGAATTTCTTGGCCTGTTTCAGTTTC +
Preference number: 6 (lower is better)
Translates to: SSLPFPAAILSSLQT*LGREDQNFLACFSF
Trigger: GAAACTGAAACAGGCCAAGAAATTCTGGTCCTCCCTTCCGAGCAACGTTTGCAACGATGAGAGGATGGCTGCAGGAAACGGCAATGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CAA 90 bp TCTGGTTTGCTGGTGTCAACCTGGACCTCTGGGTTGTTGCCCTGGTaGGCTAATCCATTTCCTGTCACTGCAAACAGGTACCTGCTTTTG +
Preference number: 6 (lower is better)
Translates to: SGLLVSTWTSGLLPW*ANPFPVTANRYLLL
Trigger: CAAAAGCAGGTACCTGTTTGCAGTGACAGGAAATGGATTAGCCAACCAGGGCAACAACCCAGAGGTCCAGGTTGACACCAGCAAACCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CAA 90 bp AGGATCAGTATGTCTGGTTTGCTGGTGTCAACCTGGACCTCTGGGTaGTTGCCCTGGTTGGCTAATCCATTTCCTGTCACTGCAAACAGG +
Preference number: 6 (lower is better)
Translates to: RISMSGLLVSTWTSG*LPWLANPFPVTANR
Trigger: CCTGTTTGCAGTGACAGGAAATGGATTAGCCAACCAGGGCAACAACCCAGAGGTCCAGGTTGACACCAGCAAACCAGACATACTGATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CCA 72 bp CGGCTTTCTCATTGGCACTCTTCCCAGCATGGTCAGTaGCATTGTAGTCAAACTCTGAAGGGCACTGCTGAT +
Preference number: 6 (lower is better)
Translates to: RLSHWHSSQHGQ*HCSQTLKGTAD
Trigger: ATCAGCAGTGCCCTTCAGAGTTTGACTACAATGCCACTGACCATGCTGGGAAGAGTGCCAATGAGAAAGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CAA 72 bp ATGTCTGGTTTGCTGGTGTCAACCTGGACCTCTGGGTaGTTGCCCTGGTTGGCTAATCCATTTCCTGTCACT +
Preference number: 6 (lower is better)
Translates to: MSGLLVSTWTSG*LPWLANPFPVT
Trigger: AGTGACAGGAAATGGATTAGCCAACCAGGGCAACAACCCAGAGGTCCAGGTTGACACCAGCAAACCAGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CAA 90 bp AACAGGTACCTGCTTTTGCCTTTCCCATTCCAACAGTCATCCTCATaGCCGTTTCCTGCAGCCATCCTCTCATCGTTGCAAACGTTGCTC +
Preference number: 6 (lower is better)
Translates to: NRYLLLPFPFQQSSS*PFPAAILSSLQTLL
Trigger: GAGCAACGTTTGCAACGATGAGAGGATGGCTGCAGGAAACGGCAATGAGGATGACTGTTGGAATGGGAAAGGCAAAAGCAGGTACCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CAA 90 bp ATCAGTATGTCTGGTTTGCTGGTGTCAACCTGGACCTCTGGGTTGTaGCCCTGGTTGGCTAATCCATTTCCTGTCACTGCAAACAGGTAC +
Preference number: 6 (lower is better)
Translates to: ISMSGLLVSTWTSGL*PWLANPFPVTANRY
Trigger: GTACCTGTTTGCAGTGACAGGAAATGGATTAGCCAACCAGGGCAACAACCCAGAGGTCCAGGTTGACACCAGCAAACCAGACATACTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS TCA 72 bp ATCCCCTTGGTTGGCCAAACAGCCTCTCATGATGTTTaGGCAGTAGTTGTAACATGGCTTCACAGTCACGAG +
Preference number: 6 (lower is better)
Translates to: IPLVGQTASHDV*AVVVTWLHSHE
Trigger: CTCGTGACTGTGAAGCCATGTTACAACTACTGCTCAAACATCATGAGAGGCTGTTTGGCCAACCAAGGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS GCA 72 bp TGCTTTTGCCTTTCCCATTCCAACAGTCATCCTCATTaGCGTTTCCTGCAGCCATCCTCTCATCGTTGCAAA +
Preference number: 6 (lower is better)
Translates to: CFCLSHSNSHPH*RFLQPSSHRCK
Trigger: TTTGCAACGATGAGAGGATGGCTGCAGGAAACGGCAATGAGGATGACTGTTGGAATGGGAAAGGCAAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CCA 72 bp TCGAAGAGCCATGATTTGACGAAGGATCAGTATGTCTaGTTTGCTGGTGTCAACCTGGACCTCTGGGTTGTT +
Preference number: 6 (lower is better)
Translates to: SKSHDLTKDQYV*FAGVNLDLWVV
Trigger: AACAACCCAGAGGTCCAGGTTGACACCAGCAAACCAGACATACTGATCCTTCGTCAAATCATGGCTCTTCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CAA 90 bp GTATGCATTCTTCATCTTGCTGGTCATCACTCGAAGAGCCATGATTaGACGAAGGATCAGTATGTCTGGTTTGCTGGTGTCAACCTGGAC +
Preference number: 6 (lower is better)
Translates to: VCILHLAGHHSKSHD*TKDQYVWFAGVNLD
Trigger: GTCCAGGTTGACACCAGCAAACCAGACATACTGATCCTTCGTCAAATCATGGCTCTTCGAGTGATGACCAGCAAGATGAAGAATGCATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS TCA 72 bp AATCGAGATCCCCTTGGTTGGCCAAACAGCCTCTCATaGTGTTTGAGCAGTAGTTGTAACATGGCTTCACAG +
Preference number: 6 (lower is better)
Translates to: NRDPLGWPNSLS*CLSSSCNMASQ
Trigger: CTGTGAAGCCATGTTACAACTACTGCTCAAACATCATGAGAGGCTGTTTGGCCAACCAAGGGGATCTCGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CAA 72 bp GAGGACCAGAATTTCTTGGCCTGTTTCAGTTTCTCCTaGACATCAGTAACCAGTCGGTCCAAACTAGTGCCA +
Preference number: 6 (lower is better)
Translates to: EDQNFLACFSFS*TSVTSRSKLVP
Trigger: TGGCACTAGTTTGGACCGACTGGTTACTGATGTCAAGGAGAAACTGAAACAGGCCAAGAAATTCTGGTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CAA 72 bp CTTCATCTTGCTGGTCATCACTCGAAGAGCCATGATTaGACGAAGGATCAGTATGTCTGGTTTGCTGGTGTC +
Preference number: 6 (lower is better)
Translates to: LHLAGHHSKSHD*TKDQYVWFAGV
Trigger: GACACCAGCAAACCAGACATACTGATCCTTCGTCAAATCATGGCTCTTCGAGTGATGACCAGCAAGATGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CAA 90 bp CCACTACTTTCATCACTGATATCAAAGAAGTCCACGTCGTTCCCATaGTATGCATTCTTCATCTTGCTGGTCATCACTCGAAGAGCCATG +
Preference number: 6 (lower is better)
Translates to: PLLSSLISKKSTSFP*YAFFILLVITRRAM
Trigger: CATGGCTCTTCGAGTGATGACCAGCAAGATGAAGAATGCATACAATGGGAACGACGTGGACTTCTTTGATATCAGTGATGAAAGTAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS GCA 72 bp ACTGATATCAAAGAAGTCCACGTCGTTCCCATTGTATaGATTCTTCATCTTGCTGGTCATCACTCGAAGAGC +
Preference number: 6 (lower is better)
Translates to: TDIKEVHVVPIV*ILHLAGHHSKS
Trigger: GCTCTTCGAGTGATGACCAGCAAGATGAAGAATGCATACAATGGGAACGACGTGGACTTCTTTGATATCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CAA 72 bp CTGTTCGCTGACCACACTTTTGAAATCATCTTTACTTaGCAGGCTGTACTTCTCCTCCATCTCTTGAGAGCA +
Preference number: 6 (lower is better)
Translates to: LFADHTFEIIFT*QAVLLLHLLRA
Trigger: TGCTCTCAAGAGATGGAGGAGAAGTACAGCCTGCAAAGTAAAGATGATTTCAAAAGTGTGGTCAGCGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370828.4
CDS CCA 72 bp TCTATGAAATTGTTCCATTCAAAATCGAGATCCCCTTaGTTGGCCAAACAGCCTCTCATGATGTTTGAGCAG +
Preference number: 6 (lower is better)
Translates to: SMKLFHSKSRSP*LAKQPLMMFEQ
Trigger: CTGCTCAAACATCATGAGAGGCTGTTTGGCCAACCAAGGGGATCTCGATTTTGAATGGAACAATTTCATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370828.4