RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000147257

Ensembl transcript IDs: ENST00000370818.8, ENST00000394299.7, ENST00000406757.2, ENST00000631057.2, ENST00000666017.1, ENST00000666673.1, ENST00000667662.1, ENST00000669691.1

Found 189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATAAGGAAGACCACAGGGTaGTGTAGGGCAGCACATGTG +
Preference number: 2 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGIRKTTG*CRAAHV
Trigger: CACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCT...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR GCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCCCACCAAGCACGCGGTaGGCACGGTCCCGGCCATCC +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCPPSTR*ARSRPS
Trigger: GGATGGCCGGGACCGTGCGCACCGCGTGCTTGGTGG...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCGAGAGCGCGGGAGAGTaGCAGCCGGAGCGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCESAGE*QPEREQ
Trigger: CTGCTCTCGCTCCGGCTGCCACTCTCCCGCGCTCTC...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR GCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCGAGGAGCAAGAGACGTaGTGCTACCCAGCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCEEQET*CYPAAA
Trigger: TGCAGCGGCTGGGTAGCAGCACGTCTCTTGCTCCTC...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCTGGCACGGGAGTTTCTaGCACCCACTTGAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCWHGSF*HPLESG
Trigger: CCCGGACTCAAGTGGGTGCCAGAAACTCCCGTGCCA...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCAGCCTGGCAGTGGCCCTaGGGAGCAAGAGACGTGCTG +
Preference number: 4 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAAAWQWP*GARDVL
Trigger: CAGCACGTCTCTTGCTCCTCAGGGCCACTGCCAGGC...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCTTTCTGGCACCCACTTaGGTCCGGGCTGCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCFLAPT*VRAAVS
Trigger: AGAGACTGCAGCCCGGACTCAAGTGGGTGCCAGAAA...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCTTCGGAGTTGCCTGCTaGCTGTTTCCAGGCGCATCA +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCFGVAC*LFPGAS
Trigger: TGATGCGCCTGGAAACAGTCAGCAGGCAACTCCGAA...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR GCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCGAGCAAGAGACGTGCTaGTACCCAGCCGCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCEQETC*YPAAAK
Trigger: TTTTGCAGCGGCTGGGTAGCAGCACGTCTCTTGCTC...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR GCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCCCACAGGGCTATGGCTaGAGATGTAGCCAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCPQGYG*RCSQAK
Trigger: CTTTGCCTGGCTACATCTGCAGCCATAGCCCTGTGG...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR GCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCGCACCAGGCAGTCAGTaGACCAGGAAGAAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCAPGSQ*TRKKKH
Trigger: GTGCTTCTTCTTCCTGGTGCACTGACTGCCTGGTGC...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCATTGATGTCCAAGGCTaGATCAGGCAGGCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCIDVQG*IRQAWV
Trigger: AACCCAGGCCTGCCTGATTCAGCCTTGGACATCAAT...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCCTCGGAGGCACTCATTaGTGTCCAAGGCTGAATCAG +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCLGGTH*CPRLNQ
Trigger: CTGATTCAGCCTTGGACATCAATGAGTGCCTCCGAG...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCAGTACCACATTCTGGTaGGCATTCGGCCACAGTCCT +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCSTTFW*AFGHSP
Trigger: AGGACTGTGGCCGAATGCTCACCAGAATGTGGTACT...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR GCA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCAGAGGAGCAAGAGACGTaGTGCTACCCAGCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAAEEQET*CYPAAA
Trigger: TGCAGCGGCTGGGTAGCAGCACGTCTCTTGCTCCTC...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR GCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCGTTGTCCTTCGGAGTTaGCTGCTGACTGTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCVVLRS*LLTVSR
Trigger: CCTGGAAACAGTCAGCAGGCAACTCCGAAGGACAAC...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCCCTAGTGACTTGCAGTaGCTTGGAAACCTGGGTCAT +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCPSDLQ*LGNLGH
Trigger: ATGACCCAGGTTTCCAAGTCACTGCAAGTCACTAGG...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCACGTTCCCGAGGTTGTaGAAGGTGCTTATCTCGTTG +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCTFPRL*KVLISL
Trigger: CAACGAGATAAGCACCTTTCACAACCTCGGGAACGT...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR GCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATACCACCAAGCACGCGGTaGGCACGGTCCCGGCCATCC +
Preference number: 4 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGIPPSTR*ARSRPS
Trigger: GGATGGCCGGGACCGTGCGCACCGCGTGCTTGGTGG...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR GCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCTTTCAGGTCACGTCTTaGTCCTCGGAGGCACTCATT +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCFQVTS*SSEALI
Trigger: AATGAGTGCCTCCGAGGAGCAAGACGTGACCTGAAA...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCTCCATACTTGCAGACTaGAGCAGCTGTTCCATGTTC +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCSILAD*SSCSMF
Trigger: GAACATGGAACAGCTGCTTCAGTCTGCAAGTATGGA...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCCCAAGATTCAGAGCCTaGAGGAAGATCCTAGTGACT +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCPRFRA*RKILVT
Trigger: AGTCACTAGGATCTTCCTTCAGGCTCTGAATCTTGG...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCATTCGGAGTTGCCTGCTaGCTGTTTCCAGGCGCATCA +
Preference number: 4 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAAFGVAC*LFPGAS
Trigger: TGATGCGCCTGGAAACAGTCAGCAGGCAACTCCGAA...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCAAGATGGCCATGCTGGTaGGAAGCTTCAGCGGGGAAT +
Preference number: 4 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAARWPCW*EASAGN
Trigger: ATTCCCCGCTGAAGCTTCTCACCAGCATGGCCATCT...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR GCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCCTTGAGCTCCATACTTaGAGACTGAAGCAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCLELHT*RLKQLF
Trigger: GAACAGCTGCTTCAGTCTGCAAGTATGGAGCTCAAG...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR GCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCCACCAGAGCCTCCAATaGACTCATCTTCATCATCAC +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCHQSLQ*THLHHH
Trigger: GTGATGATGAAGATGAGTGCATTGGAGGCTCTGGTG...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR GCA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCAGCACCAGGCAGTCAGTaGACCAGGAAGAAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAAAPGSQ*TRKKKH
Trigger: GTGCTTCTTCTTCCTGGTGCACTGACTGCCTGGTGC...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR GCA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCAAGGAAGACCACAGGGTaGTGTAGGGCAGCACATGTG +
Preference number: 4 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAARKTTG*CRAAHV
Trigger: CACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCT...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACTCGGAGGCACTCATTaGTGTCCAAGGCTGAATCAG +
Preference number: 4 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAALGGTH*CPRLNQ
Trigger: CTGATTCAGCCTTGGACATCAATGAGTGCCTCCGAG...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACCATACAGCCTTGCATaGCCACATTGCAGTAACCGC +
Preference number: 4 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAAPYSLA*PHCSNR
Trigger: GCGGTTACTGCAATGTGGTCATGCAAGGCTGTATGG...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCAGTTTGTCAATAATTTaGCTGACCACTGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCSLSII*LTTGSG
Trigger: CCCTGAGCCAGTGGTCAGTCAAATTATTGACAAACT...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR GCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCTTAGGGAGACATACTTaGAAATCTGATCCTGGCACG +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCLGRHT*KSDPGT
Trigger: CGTGCCAGGATCAGATTTGCAAGTATGTCTCCCTAA...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR GCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCAAGATCCTAGTGACTTaGAGTGACTTGGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCKILVT*SDLETW
Trigger: CCAGGTTTCCAAGTCACTGCAAGTCACTAGGATCTT...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR GCA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCAGTTGTCCTTCGGAGTTaGCTGCTGACTGTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAAVVLRS*LLTVSR
Trigger: CCTGGAAACAGTCAGCAGGCAACTCCGAAGGACAAC...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCTCTCAGTTTCAGTGGTaGTCAGCTTTCCTGCATTCT +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCSQFQW*SAFLHS
Trigger: AGAATGCAGGAAAGCTGACCACCACTGAAACTGAGA...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394299.7
CDS-3UTR TCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATACCGGGAAGTCCAAGCTaGGCAGCATCGCCACCACCA +
Preference number: 4 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGIPGSPS*AASPPP
Trigger: TGGTGGTGGCGATGCTGCTCAGCTTGGACTTCCCGG...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCTTGGGTAGTTGTTCTTaGACATGGCATTGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCLGSCS*TWHWCS
Trigger: ACTACACCAATGCCATGTTCAAGAACAACTACCCAA...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCCCATGTCATCTACATTaGTGTCAGAACCCAAGATGT +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCPCHLH*CQNPRC
Trigger: ACATCTTGGGTTCTGACATCAATGTAGATGACATGG...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCAGGCCACAGTCCTTACTaGACTTCAGGTGATCAGTTG +
Preference number: 4 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAAGHSPY*TSGDQL
Trigger: CAACTGATCACCTGAAGTTCAGTAAGGACTGTGGCC...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCCTATATTGGCGTTGTTaGGAATGGGCACATAACTTG +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCLYWRC*EWAHNL
Trigger: CAAGTTATGTGCCCATTCTCAACAACGCCAATATAG...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCGCAAGGAAGCGGAGCTaGTTCTTCACTTTTATCATT +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCARKRS*FFTFII
Trigger: AATGATAAAAGTGAAGAATCAGCTCCGCTTCCTTGC...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCTTGTGGAGTCAGGCTTaGGTAGTTGTTCTTGAACAT +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCLWSQA*VVVLEH
Trigger: ATGTTCAAGAACAACTACCCAAGCCTGACTCCACAA...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCAAACTCAAAAGCTTGTaGAGTCAGGCTTGGGTAGTT +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCKLKSL*SQAWVV
Trigger: AACTACCCAAGCCTGACTCCACAAGCTTTTGAGTTT...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCCTGGGTATAGATGACTaGAAACAGGCTGTCAAACAA +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCLGIDD*KQAVKQ
Trigger: TTGTTTGACAGCCTGTTTCCAGTCATCTATACCCAG...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCATTCTTCCATCTTTCTTaGGCAGCATGTTGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAAFFHLS*AACWAL
Trigger: AAGGGCCCAACATGCTGCTCAAGAAAGATGGAAGAA...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCATCCATACTTGCAGACTaGAGCAGCTGTTCCATGTTC +
Preference number: 4 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAASILAD*SSCSMF
Trigger: GAACATGGAACAGCTGCTTCAGTCTGCAAGTATGGA...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCAGAGAGACACATCTGTaGAAAATTCACCCACAAACT +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCRETHL*KIHPQT
Trigger: AGTTTGTGGGTGAATTTTTCACAGATGTGTCTCTCT...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCGGTGATCAGTTGTGTTaGTCACTTCAATTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCGDQLC*SLQFQD
Trigger: ATCTTGGAATTGAAGTGATCAACACAACTGATCACC...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCTTACTGAACTTCAGGTaGTCAGTTGTGTTGATCACT +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCLLNFR*SVVLIT
Trigger: AGTGATCAACACAACTGATCACCTGAAGTTCAGTAA...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCAGAATCATGGATTGTTaGAAAGAGACCAAGCAGTAC +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCRIMDC*KETKQY
Trigger: GTACTGCTTGGTCTCTTTTCAACAATCCATGATTCT...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCAAAGACTTCAACTTCTaGATTAGTTCCCTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCKDFNF*ISSLLR
Trigger: CCGAAGAAGGGAACTAATTCAGAAGTTGAAGTCTTT...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCTCAGCTCATGGAGATTaGACTGGTTTTTCATTCCAT +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCSAHGD*TGFSFH
Trigger: ATGGAATGAAAAACCAGTTCAATCTCCATGAGCTGA...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR GCA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACACCAGAGCCTCCAATaGACTCATCTTCATCATCAC +
Preference number: 4 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAAHQSLQ*THLHHH
Trigger: GTGATGATGAAGATGAGTGCATTGGAGGCTCTGGTG...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR GCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATAGTAGGGCAGCACATGTaGTGGGCACCAGGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGIVGQHM*WAPGSQ
Trigger: CTGACTGCCTGGTGCCCAGCACATGTGCTGCCCTAC...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATACCGGGCTGCAGTCTCTaGAAGAAGGAGCGGACTTGG +
Preference number: 4 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGIPGCSL*KKERTW
Trigger: CCAAGTCCGCTCCTTCTTCCAGAGACTGCAGCCCGG...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATATTTCTGGCACCCACTTaGGTCCGGGCTGCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGIFLAPT*VRAAVS
Trigger: AGAGACTGCAGCCCGGACTCAAGTGGGTGCCAGAAA...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCATTAGCTGGGTATAGATaGCTGGAAACAGGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAALAGYR*LETGCQ
Trigger: TTGACAGCCTGTTTCCAGTCATCTATACCCAGCTAA...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR GCA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCATTAGGGAGACATACTTaGAAATCTGATCCTGGCACG +
Preference number: 4 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAALGRHT*KSDPGT
Trigger: CGTGCCAGGATCAGATTTGCAAGTATGTCTCCCTAA...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR GCA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCAAAGATCCTAGTGACTTaGAGTGACTTGGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAAKILVT*SDLETW
Trigger: CCAGGTTTCCAAGTCACTGCAAGTCACTAGGATCTT...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CCA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCAAGTGACTTGGAAACCTaGGTCATAATAAGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAASDLET*VIISLG
Trigger: CCCCAAGCTTATTATGACCCAGGTTTCCAAGTCACT...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCTTTCCTGCATTCTTCTaGACATACTGGATAGAATCA +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCFPAFF*TYWIES
Trigger: TGATTCTATCCAGTATGTCCAGAAGAATGCAGGAAA...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATAAGATGGCCATGCTGGTaGGAAGCTTCAGCGGGGAAT +
Preference number: 4 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGIRWPCW*EASAGN
Trigger: ATTCCCCGCTGAAGCTTCTCACCAGCATGGCCATCT...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR GCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATACTGCTACCCAGCCGCTaGAAAAGTTTCCTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGILLPSR*KSFLAA
Trigger: AGCTGCGAGGAAACTTTTGCAGCGGCTGGGTAGCAG...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR GCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATAGAGCAAGAGACGTGCTaGTACCCAGCCGCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGIEQETC*YPAAAK
Trigger: TTTTGCAGCGGCTGGGTAGCAGCACGTCTCTTGCTC...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR GCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATACACTTGAGTCCGGGCTaGAGTCTCTGGAAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGIHLSPG*SLWKKE
Trigger: CTCCTTCTTCCAGAGACTGCAGCCCGGACTCAAGTG...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CCA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCATTGTGGAGTCAGGCTTaGGTAGTTGTTCTTGAACAT +
Preference number: 4 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAALWSQA*VVVLEH
Trigger: ATGTTCAAGAACAACTACCCAAGCCTGACTCCACAA...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCTTCTTCTGGACATACTaGATAGAATCATGGATTGTT +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCFFWTY*IESWIV
Trigger: AACAATCCATGATTCTATCCAGTATGTCCAGAAGAA...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CCA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCTTCATTTTCAGCTCATaGAGATTGAACTGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCFIFSS*RLNWFF
Trigger: GAAAAACCAGTTCAATCTCCATGAGCTGAAAATGAA...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CCA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCAATGGTTCTCAGGAGCTaGTTAATGTGCTTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAAMVLRS*LMCFSL
Trigger: CAAACTGAAGCACATTAACCAGCTCCTGAGAACCAT...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATAATTGATGTCCAAGGCTaGATCAGGCAGGCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGIIDVQG*IRQAWV
Trigger: AACCCAGGCCTGCCTGATTCAGCCTTGGACATCAAT...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCAGGTGATCAGTTGTGTTaGTCACTTCAATTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAAGDQLC*SLQFQD
Trigger: ATCTTGGAATTGAAGTGATCAACACAACTGATCACC...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCATTACTGAACTTCAGGTaGTCAGTTGTGTTGATCACT +
Preference number: 4 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAALLNFR*SVVLIT
Trigger: AGTGATCAACACAACTGATCACCTGAAGTTCAGTAA...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATAAGTACCACATTCTGGTaGGCATTCGGCCACAGTCCT +
Preference number: 4 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGISTTFW*AFGHSP
Trigger: AGGACTGTGGCCGAATGCTCACCAGAATGTGGTACT...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCAAAAACCGCAGCATTCTaGATAATTAAGAACTTGAGC +
Preference number: 4 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAAKTAAF*IIKNLS
Trigger: GCTCAAGTTCTTAATTATTCAGAATGCTGCGGTTTT...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATAACGTTCCCGAGGTTGTaGAAGGTGCTTATCTCGTTG +
Preference number: 4 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGITFPRL*KVLISL
Trigger: CAACGAGATAAGCACCTTTCACAACCTCGGGAACGT...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATAACATACTTGCAAATCTaGTCCTGGCACGGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGITYLQI*SWHGSF
Trigger: GAAACTCCCGTGCCAGGATCAGATTTGCAAGTATGT...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATACCAAGATTCAGAGCCTaGAGGAAGATCCTAGTGACT +
Preference number: 4 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGIPRFRA*RKILVT
Trigger: AGTCACTAGGATCTTCCTTCAGGCTCTGAATCTTGG...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR GCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATACTTGAGCTCCATACTTaGAGACTGAAGCAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGILELHT*RLKQLF
Trigger: GAACAGCTGCTTCAGTCTGCAAGTATGGAGCTCAAG...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR GCA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCAAGGAGCTGGTTAATGTaGTTCAGTTTGTCAATAATT +
Preference number: 4 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAARSWLM*FSLSII
Trigger: AATTATTGACAAACTGAAGCACATTAACCAGCTCCT...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR GCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATACGAGGTTGTGAAAGGTaGTTATCTCGTTGTCCTTCG +
Preference number: 4 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGIRGCER*LSRCPS
Trigger: CGAAGGACAACGAGATAAGCACCTTTCACAACCTCG...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATATTCCTTGCTGCCTTTTaGCTGTATCTCTCCACGAGT +
Preference number: 4 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGIFLAAF*LYLSTS
Trigger: ACTCGTGGAGAGATACAGCCAAAAGGCAGCAAGGAA...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATAAGTTTGTCAATAATTTaGCTGACCACTGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGISLSII*LTTGSG
Trigger: CCCTGAGCCAGTGGTCAGTCAAATTATTGACAAACT...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATAAGTGACTTGGAAACCTaGGTCATAATAAGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGISDLET*VIISLG
Trigger: CCCCAAGCTTATTATGACCCAGGTTTCCAAGTCACT...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATAAATTTGACTGACCACTaGCTCAGGGCCCTTCATTTT +
Preference number: 4 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGINLTDH*LRALHF
Trigger: AAAATGAAGGGCCCTGAGCCAGTGGTCAGTCAAATT...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATATCTTCTCAGTTTCAGTaGTGGTCAGCTTTCCTGCAT +
Preference number: 4 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGISSQFQ*WSAFLH
Trigger: ATGCAGGAAAGCTGACCACCACTGAAACTGAGAAGA...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394299.7
CDS-3UTR TCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATACCATGTCATCTACATTaGTGTCAGAACCCAAGATGT +
Preference number: 4 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGIPCHLH*CQNPRC
Trigger: ACATCTTGGGTTCTGACATCAATGTAGATGACATGG...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATAGCAAGGAAGCGGAGCTaGTTCTTCACTTTTATCATT +
Preference number: 4 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGIARKRS*FFTFII
Trigger: AATGATAAAAGTGAAGAATCAGCTCCGCTTCCTTGC...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR GCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATAAATGGGCACATAACTTaGCAATCTGTAAGTCTAGCC +
Preference number: 4 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGINGHIT*QSVSLA
Trigger: GGCTAGACTTACAGATTGGCAAGTTATGTGCCCATT...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394299.7
CDS-3UTR CCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATAAAACTCAAAAGCTTGTaGAGTCAGGCTTGGGTAGTT +
Preference number: 4 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGIKLKSL*SQAWVV
Trigger: AACTACCCAAGCCTGACTCCACAAGCTTTTGAGTTT...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATAGTTCCCTTCTTCGGCTaGATAAGGTTTCTTCATGTT +
Preference number: 4 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGIVPFFG*IRFLHV
Trigger: AACATGAAGAAACCTTATCCAGCCGAAGAAGGGAAC...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATAATGGTTCTCAGGAGCTaGTTAATGTGCTTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGIMVLRS*LMCFSL
Trigger: CAAACTGAAGCACATTAACCAGCTCCTGAGAACCAT...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATAAGAATCATGGATTGTTaGAAAGAGACCAAGCAGTAC +
Preference number: 4 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGIRIMDC*KETKQY
Trigger: GTACTGCTTGGTCTCTTTTCAACAATCCATGATTCT...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATAAAAGACTTCAACTTCTaGATTAGTTCCCTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGIKDFNF*ISSLLR
Trigger: CCGAAGAAGGGAACTAATTCAGAAGTTGAAGTCTTT...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR TCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATATCAGCTCATGGAGATTaGACTGGTTTTTCATTCCAT +
Preference number: 4 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGISAHGD*TGFSFH
Trigger: ATGGAATGAAAAACCAGTTCAATCTCCATGAGCTGA...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATATTTCCTGCATTCTTCTaGACATACTGGATAGAATCA +
Preference number: 4 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGIFPAFF*TYWIES
Trigger: TGATTCTATCCAGTATGTCCAGAAGAATGCAGGAAA...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR GCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATACATAGATTCTGTACATaGCATTCACAAGTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGIHRFCT*HSQVLQ
Trigger: TTGAAGAACTTGTGAATGGCATGTACAGAATCTATG...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR GCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATAAGGAGCTGGTTAATGTaGTTCAGTTTGTCAATAATT +
Preference number: 4 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGIRSWLM*FSLSII
Trigger: AATTATTGACAAACTGAAGCACATTAACCAGCTCCT...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CCA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATATTCATTTTCAGCTCATaGAGATTGAACTGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGIFIFSS*RLNWFF
Trigger: GAAAAACCAGTTCAATCTCCATGAGCTGAAAATGAA...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS TCA 90 bp CGGAGCGAGAGCAGTCCCAGGACTCGGCAAGCCTGGCAGTGGCCCTaGGGAGCAAGAGACGTGCTGCTACCCAGCCGCTGCAAAAGTTTC +
Preference number: 5 (lower is better)
Translates to: RSESSPRTRQAWQWP*GARDVLLPSRCKSF
Trigger: GAAACTTTTGCAGCGGCTGGGTAGCAGCACGTCTCTTGCTCCTCAGGGCCACTGCCAGGCTTGCCGAGTCCTGGGACTGCTCTCGCTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CAA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCGAAGAAGGAGCGGACTaGGTGACAGGTGGCGTCCGG +
Preference number: 5 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCEEGAD*VTGGVR
Trigger: CCGGACGCCACCTGTCACCAAGTCCGCTCCTTCTTC...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CAA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCGTTTCTGGCACCCACTaGAGTCCGGGCTGCAGTCTC +
Preference number: 5 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCVSGTH*SPGCSL
Trigger: GAGACTGCAGCCCGGACTCAAGTGGGTGCCAGAAAC...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS TCA 90 bp AGTGCACCAGGAAGAAGAAGCACACCACCGAGATGGCCATGCTGGTaGGAAGCTTCAGCGGGGAATGAACGTTCCCGAGGTTGTGAAAGG +
Preference number: 5 (lower is better)
Translates to: SAPGRRSTPPRWPCW*EASAGNERSRGCER
Trigger: CCTTTCACAACCTCGGGAACGTTCATTCCCCGCTGAAGCTTCTCACCAGCATGGCCATCTCGGTGGTGTGCTTCTTCTTCCTGGTGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000631057.2
ENST00000669691.1
CDS-3UTR CAA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCAGAAGAAGGAGCGGACTaGGTGACAGGTGGCGTCCGG +
Preference number: 5 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAAEEGAD*VTGGVR
Trigger: CCGGACGCCACCTGTCACCAAGTCCGCTCCTTCTTC...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CAA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCCGTTGTCCTTCGGAGTaGCCTGCTGACTGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCRCPSE*PADCFQ
Trigger: CTGGAAACAGTCAGCAGGCAACTCCGAAGGACAACG...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CAA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCCCTCGGAGGCACTCATaGATGTCCAAGGCTGAATCA +
Preference number: 5 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCPRRHS*MSKAES
Trigger: TGATTCAGCCTTGGACATCAATGAGTGCCTCCGAGG...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CAA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCGAATGGGCACATAACTaGCCAATAGTGGTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCEWAHN*PIVVVS
Trigger: GCTGACCACCACTATTGGCAAGTTATGTGCCCATTC...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370818.8
CDS-3UTR CAA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCTCTCTCCACGAGTTCTaGTCCATTCCAGCAAAGGGT +
Preference number: 5 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCSLHEF*SIPAKG
Trigger: ACCCTTTGCTGGAATGGACAAGAACTCGTGGAGAGA...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CAA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCTTTCTTCCATCTTTCTaGAGCAGCATGTTGGGCCCT +
Preference number: 5 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCFLPSF*SSMLGP
Trigger: AGGGCCCAACATGCTGCTCAAGAAAGATGGAAGAAA...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CAA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACTTTCAGGTCACGTCTaGCTCCTCGGAGGCACTCAT +
Preference number: 5 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAALSGHV*LLGGTH
Trigger: ATGAGTGCCTCCGAGGAGCAAGACGTGACCTGAAAG...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CAA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCTCCAGAACTCTACCTTaGGGCATAGACATGGTTCTC +
Preference number: 5 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCSRTLP*GIDMVL
Trigger: GAGAACCATGTCTATGCCCAAAGGTAGAGTTCTGGA...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CAA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACGTTGTCCTTCGGAGTaGCCTGCTGACTGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAARCPSE*PADCFQ
Trigger: CTGGAAACAGTCAGCAGGCAACTCCGAAGGACAACG...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS GCA 90 bp GGACAGAATGTATTCTCTCCAGTACTTGTCAATCTCCACCACACCTaGCATACAGCCTTGCATGACCACATTGCAGTAACCGCCACAGGG +
Preference number: 5 (lower is better)
Translates to: GQNVFSPVLVNLHHT*HTALHDHIAVTATG
Trigger: CCCTGTGGCGGTTACTGCAATGTGGTCATGCAAGGCTGTATGGCAGGTGTGGTGGAGATTGACAAGTACTGGAGAGAATACATTCTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000406757.2
ENST00000631057.2
ENST00000666673.1
CDS GCA 90 bp GTTCCCGAGGTTGTGAAAGGTGCTTATCTCGTTGTCCTTCGGAGTTaGCTGCTGACTGTTTCCAGGCGCATCATCCACATCCAGATCATA +
Preference number: 5 (lower is better)
Translates to: VPEVVKGAYLVVLRS*LLTVSRRIIHIQII
Trigger: TATGATCTGGATGTGGATGATGCGCCTGGAAACAGTCAGCAGGCAACTCCGAAGGACAACGAGATAAGCACCTTTCACAACCTCGGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000631057.2
ENST00000666017.1
ENST00000666673.1
ENST00000667662.1
ENST00000669691.1
CDS-3UTR CAA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCAATTTCAAAGGCCTCTaGGAAAACCGCAGCATTCTG +
Preference number: 5 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCNFKGL*ENRSIL
Trigger: CAGAATGCTGCGGTTTTCCAAGAGGCCTTTGAAATT...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CAA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACCTCGGAGGCACTCATaGATGTCCAAGGCTGAATCA +
Preference number: 5 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAAPRRHS*MSKAES
Trigger: TGATTCAGCCTTGGACATCAATGAGTGCCTCCGAGG...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CAA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCGTGACTTGCAGTGACTaGGAAACCTGGGTCATAATA +
Preference number: 5 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCVTCSD*ETWVII
Trigger: TATTATGACCCAGGTTTCCAAGTCACTGCAAGTCAC...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CAA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCCAGTTTGTCAATAATTaGACTGACCACTGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCQFVNN*TDHWLR
Trigger: CCTGAGCCAGTGGTCAGTCAAATTATTGACAAACTG...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CAA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCAAAGGTGCTTATCTCGTaGTCCTTCGGAGTTGCCTGC +
Preference number: 5 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAAKVLIS*SFGVAC
Trigger: GCAGGCAACTCCGAAGGACAACGAGATAAGCACCTT...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CAA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCAACCTGCCATACAGCCTaGCATGACCACATTGCAGTA +
Preference number: 5 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAATCHTA*HDHIAV
Trigger: TACTGCAATGTGGTCATGCAAGGCTGTATGGCAGGT...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CAA 90 bp AGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACATGTGCATAAGCAGATCTATATaGGCGTTGTTGAGAATGGGC +
Preference number: 5 (lower is better)
Translates to: SGSLYRGRPQGAVGQHMCISRSI*ALLRMG
Trigger: GCCCATTCTCAACAACGCCAATATAGATCTGCTTAT...GCACATGTGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CAA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCAATTCCTTGCTGCCTTTaGGCTGTATCTCTCCACGAG +
Preference number: 5 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAAIPCCL*AVSLHE
Trigger: CTCGTGGAGAGATACAGCCAAAAGGCAGCAAGGAAT...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CAA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCATCCAGAACTCTACCTTaGGGCATAGACATGGTTCTC +
Preference number: 5 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAASRTLP*GIDMVL
Trigger: GAGAACCATGTCTATGCCCAAAGGTAGAGTTCTGGA...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CAA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCAAATTTCAAAGGCCTCTaGGAAAACCGCAGCATTCTG +
Preference number: 5 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAANFKGL*ENRSIL
Trigger: CAGAATGCTGCGGTTTTCCAAGAGGCCTTTGAAATT...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CAA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCAGTGACTTGCAGTGACTaGGAAACCTGGGTCATAATA +
Preference number: 5 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAAVTCSD*ETWVII
Trigger: TATTATGACCCAGGTTTCCAAGTCACTGCAAGTCAC...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CAA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCATATTCTCTCCAGTACTaGTCAATCTCCACCACACCT +
Preference number: 5 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAAYSLQY*SISTTP
Trigger: AGGTGTGGTGGAGATTGACAAGTACTGGAGAGAATA...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS TCA 90 bp ATGGTTCTCAGGAGCTGGTTAATGTGCTTCAGTTTGTCAATAATTTaGCTGACCACTGGCTCAGGGCCCTTCATTTTCAGCTCATGGAGA +
Preference number: 5 (lower is better)
Translates to: MVLRSWLMCFSLSII*LTTGSGPFIFSSWR
Trigger: TCTCCATGAGCTGAAAATGAAGGGCCCTGAGCCAGTGGTCAGTCAAATTATTGACAAACTGAAGCACATTAACCAGCTCCTGAGAACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000406757.2
ENST00000631057.2
ENST00000666017.1
ENST00000666673.1
ENST00000667662.1
ENST00000669691.1
CDS TCA 90 bp TACATTTGGGTCAGCACTAATCAGTTACCTGCAAGGAAGCGGAGCTaGTTCTTCACTTTTATCATTCCATCACCAGAGCCTCCAATGCAC +
Preference number: 5 (lower is better)
Translates to: YIWVSTNQLPARKRS*FFTFIIPSPEPPMH
Trigger: GTGCATTGGAGGCTCTGGTGATGGAATGATAAAAGTGAAGAATCAGCTCCGCTTCCTTGCAGGTAACTGATTAGTGCTGACCCAAATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406757.2
CDS CCA 90 bp CCCAGTCTAGTGGTGGTCAGCTTTCCTGCATTCTTCTGGACATACTaGATAGAATCATGGATTGTTGAAAAGAGACCAAGCAGTACGTTC +
Preference number: 5 (lower is better)
Translates to: PSLVVVSFPAFFWTY*IESWIVEKRPSSTF
Trigger: GAACGTACTGCTTGGTCTCTTTTCAACAATCCATGATTCTATCCAGTATGTCCAGAAGAATGCAGGAAAGCTGACCACCACTAGACTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666673.1
CDS CCA 90 bp ACAGCAAGACCCAGTCTAGTGGTGGTCAGCTTTCCTGCATTCTTCTaGACATACTGGATAGAATCATGGATTGTTGAAAAGAGACCAAGC +
Preference number: 5 (lower is better)
Translates to: TARPSLVVVSFPAFF*TYWIESWIVEKRPS
Trigger: GCTTGGTCTCTTTTCAACAATCCATGATTCTATCCAGTATGTCCAGAAGAATGCAGGAAAGCTGACCACCACTAGACTGGGTCTTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666673.1
CDS-3UTR CAA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCATGGGTCATAATAAGCTaGGGGAAATTCCCAAATACT +
Preference number: 5 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAAWVIIS*GKFPNT
Trigger: AGTATTTGGGAATTTCCCCAAGCTTATTATGACCCA...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CAA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATAAAGGTGCTTATCTCGTaGTCCTTCGGAGTTGCCTGC +
Preference number: 5 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGIKVLIS*SFGVAC
Trigger: GCAGGCAACTCCGAAGGACAACGAGATAAGCACCTT...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS TCA 90 bp CCACAAACTCAAAAGCTTGTGGAGTCAGGCTTGGGTAGTTGTTCTTaGACATGGCATTGGTGTAGTTCTTGGCATGGCGAACAACAATTT +
Preference number: 5 (lower is better)
Translates to: PQTQKLVESGLGSCS*TWHWCSSWHGEQQF
Trigger: AAATTGTTGTTCGCCATGCCAAGAACTACACCAATGCCATGTTCAAGAACAACTACCCAAGCCTGACTCCACAAGCTTTTGAGTTTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000631057.2
CDS CCA 90 bp GAGCTGGTTAATGTGCTTCAGTTTGTCAATAATTTGACTGACCACTaGCTCAGGGCCCTTCATTTTCAGCTCATGGAGATTGAACTGGTT +
Preference number: 5 (lower is better)
Translates to: ELVNVLQFVNNLTDH*LRALHFQLMEIELV
Trigger: AACCAGTTCAATCTCCATGAGCTGAAAATGAAGGGCCCTGAGCCAGTGGTCAGTCAAATTATTGACAAACTGAAGCACATTAACCAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000406757.2
ENST00000631057.2
ENST00000666017.1
ENST00000666673.1
ENST00000667662.1
ENST00000669691.1
CDS-3UTR CAA 90 bp ATAAGAAAGTGGTTCCCTTTATCGAGGAAGACCACAGGGTGCTGTAGGGCAGCACTGTCAAACAATTCATaGACCATGTCATCTACATTG +
Preference number: 5 (lower is better)
Translates to: IRKWFPLSRKTTGCCRAALSNNS*TMSSTL
Trigger: CAATGTAGATGACATGGTCAATGAATTGTTTGACAG...TGCTGCCCTACAGCACCCTGTGGTCTTCCTCGATAAAGGGAACCACTTTCTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CAA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATAACCTGCCATACAGCCTaGCATGACCACATTGCAGTA +
Preference number: 5 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGITCHTA*HDHIAV
Trigger: TACTGCAATGTGGTCATGCAAGGCTGTATGGCAGGT...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CAA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATATCTCTCCACGAGTTCTaGTCCATTCCAGCAAAGGGT +
Preference number: 5 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGISLHEF*SIPAKG
Trigger: ACCCTTTGCTGGAATGGACAAGAACTCGTGGAGAGA...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CAA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATAATTCCTTGCTGCCTTTaGGCTGTATCTCTCCACGAG +
Preference number: 5 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGIIPCCL*AVSLHE
Trigger: CTCGTGGAGAGATACAGCCAAAAGGCAGCAAGGAAT...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS TCA 90 bp AATTCCAAGATTCAGAGCCTGAAGGAAGATCCTAGTGACTTGCAGTaGCTTGGAAACCTGGGTCATAATAAGCTTGGGGAAATTCCCAAA +
Preference number: 5 (lower is better)
Translates to: NSKIQSLKEDPSDLQ*LGNLGHNKLGEIPK
Trigger: TTTGGGAATTTCCCCAAGCTTATTATGACCCAGGTTTCCAAGTCACTGCAAGTCACTAGGATCTTCCTTCAGGCTCTGAATCTTGGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000631057.2
CDS CCA 90 bp TGTGAAAAATTCACCCACAAACTCAAAAGCTTGTGGAGTCAGGCTTaGGTAGTTGTTCTTGAACATGGCATTGGTGTAGTTCTTGGCATG +
Preference number: 5 (lower is better)
Translates to: CEKFTHKLKSLWSQA*VVVLEHGIGVVLGM
Trigger: CATGCCAAGAACTACACCAATGCCATGTTCAAGAACAACTACCCAAGCCTGACTCCACAAGCTTTTGAGTTTGTGGGTGAATTTTTCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000631057.2
CDS CCA 90 bp GAGAGACACATCTGTGAAAAATTCACCCACAAACTCAAAAGCTTGTaGAGTCAGGCTTGGGTAGTTGTTCTTGAACATGGCATTGGTGTA +
Preference number: 5 (lower is better)
Translates to: ERHICEKFTHKLKSL*SQAWVVVLEHGIGV
Trigger: TACACCAATGCCATGTTCAAGAACAACTACCCAAGCCTGACTCCACAAGCTTTTGAGTTTGTGGGTGAATTTTTCACAGATGTGTCTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000631057.2
CDS CCA 90 bp TTGCCAATAGTGGTGGTCAGCTTTCCTGCATTCTTCTGGACATACTaGATAGAATCATGGATTGTTGAAAAGAGACCAAGCAGTACGTTC +
Preference number: 5 (lower is better)
Translates to: LPIVVVSFPAFFWTY*IESWIVEKRPSSTF
Trigger: GAACGTACTGCTTGGTCTCTTTTCAACAATCCATGATTCTATCCAGTATGTCCAGAAGAATGCAGGAAAGCTGACCACCACTATTGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370818.8
ENST00000406757.2
ENST00000631057.2
CDS CCA 90 bp GCACATAACTTGCCAATAGTGGTGGTCAGCTTTCCTGCATTCTTCTaGACATACTGGATAGAATCATGGATTGTTGAAAAGAGACCAAGC +
Preference number: 5 (lower is better)
Translates to: AHNLPIVVVSFPAFF*TYWIESWIVEKRPS
Trigger: GCTTGGTCTCTTTTCAACAATCCATGATTCTATCCAGTATGTCCAGAAGAATGCAGGAAAGCTGACCACCACTATTGGCAAGTTATGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370818.8
ENST00000406757.2
ENST00000631057.2
CDS CCA 90 bp TCAGTTTCAGTGGTGGTCAGCTTTCCTGCATTCTTCTGGACATACTaGATAGAATCATGGATTGTTGAAAAGAGACCAAGCAGTACGTTC +
Preference number: 5 (lower is better)
Translates to: SVSVVVSFPAFFWTY*IESWIVEKRPSSTF
Trigger: GAACGTACTGCTTGGTCTCTTTTCAACAATCCATGATTCTATCCAGTATGTCCAGAAGAATGCAGGAAAGCTGACCACCACTGAAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394299.7
CDS-3UTR CAA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATATTTCTTCCATCTTTCTaGAGCAGCATGTTGGGCCCT +
Preference number: 5 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGIFLPSF*SSMLGP
Trigger: AGGGCCCAACATGCTGCTCAAGAAAGATGGAAGAAA...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CAA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATACACAAACTCAAAAGCTaGTGGAGTCAGGCTTGGGTA +
Preference number: 5 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGIHKLKS*WSQAWV
Trigger: TACCCAAGCCTGACTCCACAAGCTTTTGAGTTTGTG...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS CCA 90 bp AGAGATGCAGCATTCACATTAAAGAAGTCCTTTCAGCTTCACACTTaGGAAACATCAGGCTATGCTGGGAGACTTGAGTCTTATTCTTCA +
Preference number: 5 (lower is better)
Translates to: RDAAFTLKKSFQLHT*ETSGYAGRLESYSS
Trigger: TGAAGAATAAGACTCAAGTCTCCCAGCATAGCCTGATGTTTCCCAAGTGTGAAGCTGAAAGGACTTCTTTAATGTGAATGCTGCATCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667662.1
CDS-3UTR CAA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATATATTCTCTCCAGTACTaGTCAATCTCCACCACACCT +
Preference number: 5 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGIYSLQY*SISTTP
Trigger: AGGTGTGGTGGAGATTGACAAGTACTGGAGAGAATA...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CAA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATACAGTTTGTCAATAATTaGACTGACCACTGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGIQFVNN*TDHWLR
Trigger: CCTGAGCCAGTGGTCAGTCAAATTATTGACAAACTG...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS-3UTR CAA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATAGAATGGGCACATAACTaGCCAATCTGTAAGTCTAGC +
Preference number: 5 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGIEWAHN*PICKSS
Trigger: GCTAGACTTACAGATTGGCAAGTTATGTGCCCATTC...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394299.7
CDS GCA 90 bp AAAAGAGACCAAGCAGTACGTTCTCCATGTCATAGATTCTGTACATaGCATTCACAAGTTCTTCAAGGGACAGAATGTATTCTCTCCAGT +
Preference number: 5 (lower is better)
Translates to: KRDQAVRSPCHRFCT*HSQVLQGTECILSS
Trigger: ACTGGAGAGAATACATTCTGTCCCTTGAAGAACTTGTGAATGGCATGTACAGAATCTATGACATGGAGAACGTACTGCTTGGTCTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000406757.2
ENST00000631057.2
ENST00000666673.1
CDS CCA 90 bp ATTTTCTTCTCAGTTTCAGTGGTGGTCAGCTTTCCTGCATTCTTCTaGACATACTGGATAGAATCATGGATTGTTGAAAAGAGACCAAGC +
Preference number: 5 (lower is better)
Translates to: IFFSVSVVVSFPAFF*TYWIESWIVEKRPS
Trigger: GCTTGGTCTCTTTTCAACAATCCATGATTCTATCCAGTATGTCCAGAAGAATGCAGGAAAGCTGACCACCACTGAAACTGAGAAGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394299.7
CDS TCA 90 bp CTTTCCTGCATTCTTCTGGACATACTGGATAGAATCATGGATTGTTaGAAAGAGACCAAGCAGTACGTTCTCCATGTCATAGATTCTGTA +
Preference number: 5 (lower is better)
Translates to: LSCILLDILDRIMDC*KETKQYVLHVIDSV
Trigger: TACAGAATCTATGACATGGAGAACGTACTGCTTGGTCTCTTTTCAACAATCCATGATTCTATCCAGTATGTCCAGAAGAATGCAGGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000406757.2
ENST00000631057.2
ENST00000666673.1
CDS-3UTR CAA 90 bp TTTCGAAAACATAACACATGGTTAGTCCTCTACTTCATGGCTGGAGGAGGTATACTGTCAAACAATTCATaGACCATGTCATCTACATTG +
Preference number: 5 (lower is better)
Translates to: FRKHNTWLVLYFMAGGGILSNNS*TMSSTL
Trigger: CAATGTAGATGACATGGTCAATGAATTGTTTGACAG...TATACCTCCTCCAGCCATGAAGTAGAGGACTAACCATGTGTTATGTTTTCGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS TCA 72 bp GCGGCGGGGGCTGCGCCTGTCCCGGGAAGTCCAAGCTaGGCAGCATCGCCACCACCAAGCACGCGGTGCGCA +
Preference number: 6 (lower is better)
Translates to: AAGAAPVPGSPS*AASPPPSTRCA
Trigger: TGCGCACCGCGTGCTTGGTGGTGGCGATGCTGCTCAGCTTGGACTTCCCGGGACAGGCGCAGCCCCCGCCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000631057.2
CDS TCA 72 bp AGCAGTCCCAGGACTCGGCAAGCCTGGCAGTGGCCCTaGGGAGCAAGAGACGTGCTGCTACCCAGCCGCTGC +
Preference number: 6 (lower is better)
Translates to: SSPRTRQAWQWP*GARDVLLPSRC
Trigger: GCAGCGGCTGGGTAGCAGCACGTCTCTTGCTCCTCAGGGCCACTGCCAGGCTTGCCGAGTCCTGGGACTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS GCA 72 bp AAGCCTGGCAGTGGCCCTGAGGAGCAAGAGACGTGCTaGTACCCAGCCGCTGCAAAAGTTTCCTCGCAGCTA +
Preference number: 6 (lower is better)
Translates to: KPGSGPEEQETC*YPAAAKVSSQL
Trigger: TAGCTGCGAGGAAACTTTTGCAGCGGCTGGGTAGCAGCACGTCTCTTGCTCCTCAGGGCCACTGCCAGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS GCA 72 bp CTTGAGCAGCATGTTGGGCCCTTAGGGAGACATACTTaGAAATCTGATCCTGGCACGGGAGTTTCTGGCACC +
Preference number: 6 (lower is better)
Translates to: LEQHVGPLGRHT*KSDPGTGVSGT
Trigger: GGTGCCAGAAACTCCCGTGCCAGGATCAGATTTGCAAGTATGTCTCCCTAAGGGCCCAACATGCTGCTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370818.8
ENST00000394299.7
CDS GCA 72 bp TCAGCGGGGAATGAACGTTCCCGAGGTTGTGAAAGGTaGTTATCTCGTTGTCCTTCGGAGTTGCCTGCTGAC +
Preference number: 6 (lower is better)
Translates to: SAGNERSRGCER*LSRCPSELPAD
Trigger: GTCAGCAGGCAACTCCGAAGGACAACGAGATAAGCACCTTTCACAACCTCGGGAACGTTCATTCCCCGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000631057.2
ENST00000666017.1
ENST00000666673.1
ENST00000667662.1
ENST00000669691.1
CDS CAA 72 bp CCTTGCTGCCTTTTGGCTGTATCTCTCCACGAGTTCTaGTCCATTCCAGCAAAGGGTGTCGTTTTCCGCCAC +
Preference number: 6 (lower is better)
Translates to: PCCLLAVSLHEF*SIPAKGVVFRH
Trigger: GTGGCGGAAAACGACACCCTTTGCTGGAATGGACAAGAACTCGTGGAGAGATACAGCCAAAAGGCAGCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000406757.2
ENST00000631057.2
ENST00000666673.1
ENST00000667662.1
ENST00000669691.1
CDS CAA 90 bp CGTTCCCGAGGTTGTGAAAGGTGCTTATCTCGTTGTCCTTCGGAGTaGCCTGCTGACTGTTTCCAGGCGCATCATCCACATCCAGATCAT +
Preference number: 6 (lower is better)
Translates to: RSRGCERCLSRCPSE*PADCFQAHHPHPDH
Trigger: ATGATCTGGATGTGGATGATGCGCCTGGAAACAGTCAGCAGGCAACTCCGAAGGACAACGAGATAAGCACCTTTCACAACCTCGGGAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000631057.2
ENST00000666017.1
ENST00000666673.1
ENST00000667662.1
ENST00000669691.1
CDS TCA 72 bp AAGGTGCTTATCTCGTTGTCCTTCGGAGTTGCCTGCTaGCTGTTTCCAGGCGCATCATCCACATCCAGATCA +
Preference number: 6 (lower is better)
Translates to: KVLISLSFGVAC*LFPGASSTSRS
Trigger: TGATCTGGATGTGGATGATGCGCCTGGAAACAGTCAGCAGGCAACTCCGAAGGACAACGAGATAAGCACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000631057.2
ENST00000666017.1
ENST00000666673.1
ENST00000667662.1
ENST00000669691.1
CDS CAA 72 bp GGTTGTGAAAGGTGCTTATCTCGTTGTCCTTCGGAGTaGCCTGCTGACTGTTTCCAGGCGCATCATCCACAT +
Preference number: 6 (lower is better)
Translates to: GCERCLSRCPSE*PADCFQAHHPH
Trigger: ATGTGGATGATGCGCCTGGAAACAGTCAGCAGGCAACTCCGAAGGACAACGAGATAAGCACCTTTCACAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000631057.2
ENST00000666017.1
ENST00000666673.1
ENST00000667662.1
ENST00000669691.1
CDS CAA 90 bp TTCTCTCCAGTACTTGTCAATCTCCACCACACCTGCCATACAGCCTaGCATGACCACATTGCAGTAACCGCCACAGGGTTTAACCATCAT +
Preference number: 6 (lower is better)
Translates to: FSPVLVNLHHTCHTA*HDHIAVTATGFNHH
Trigger: ATGATGGTTAAACCCTGTGGCGGTTACTGCAATGTGGTCATGCAAGGCTGTATGGCAGGTGTGGTGGAGATTGACAAGTACTGGAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000631057.2
CDS GCA 72 bp GTATTCTCTCCAGTACTTGTCAATCTCCACCACACCTaGCATACAGCCTTGCATGACCACATTGCAGTAACC +
Preference number: 6 (lower is better)
Translates to: VFSPVLVNLHHT*HTALHDHIAVT
Trigger: GGTTACTGCAATGTGGTCATGCAAGGCTGTATGGCAGGTGTGGTGGAGATTGACAAGTACTGGAGAGAATAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000406757.2
ENST00000631057.2
ENST00000666673.1
CDS CAA 90 bp ATCCTAGTGACTTGCAGTGACTTGGAAACCTGGGTCATAATAAGCTaGGGGAAATTCCCAAATACTTTCAGGTCACGTCTTGCTCCTCGG +
Preference number: 6 (lower is better)
Translates to: ILVTCSDLETWVIIS*GKFPNTFRSRLAPR
Trigger: CCGAGGAGCAAGACGTGACCTGAAAGTATTTGGGAATTTCCCCAAGCTTATTATGACCCAGGTTTCCAAGTCACTGCAAGTCACTAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000631057.2
CDS CAA 90 bp CCATTCACAAGTTCTTCAAGGGACAGAATGTATTCTCTCCAGTACTaGTCAATCTCCACCACACCTGCCATACAGCCTTGCATGACCACA +
Preference number: 6 (lower is better)
Translates to: PFTSSSRDRMYSLQY*SISTTPAIQPCMTT
Trigger: TGTGGTCATGCAAGGCTGTATGGCAGGTGTGGTGGAGATTGACAAGTACTGGAGAGAATACATTCTGTCCCTTGAAGAACTTGTGAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000406757.2
ENST00000631057.2
ENST00000666673.1
CDS CAA 90 bp CATGGTTCTCAGGAGCTGGTTAATGTGCTTCAGTTTGTCAATAATTaGACTGACCACTGGCTCAGGGCCCTTCATTTTCAGCTCATGGAG +
Preference number: 6 (lower is better)
Translates to: HGSQELVNVLQFVNN*TDHWLRALHFQLME
Trigger: CTCCATGAGCTGAAAATGAAGGGCCCTGAGCCAGTGGTCAGTCAAATTATTGACAAACTGAAGCACATTAACCAGCTCCTGAGAACCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000406757.2
ENST00000631057.2
ENST00000666017.1
ENST00000666673.1
ENST00000667662.1
ENST00000669691.1
CDS TCA 72 bp CAAAAGCTTGTGGAGTCAGGCTTGGGTAGTTGTTCTTaGACATGGCATTGGTGTAGTTCTTGGCATGGCGAA +
Preference number: 6 (lower is better)
Translates to: QKLVESGLGSCS*TWHWCSSWHGE
Trigger: TTCGCCATGCCAAGAACTACACCAATGCCATGTTCAAGAACAACTACCCAAGCCTGACTCCACAAGCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000631057.2
CDS CCA 72 bp CTGACCACTGGCTCAGGGCCCTTCATTTTCAGCTCATaGAGATTGAACTGGTTTTTCATTCCATTCCTTGCT +
Preference number: 6 (lower is better)
Translates to: LTTGSGPFIFSS*RLNWFFIPFLA
Trigger: AGCAAGGAATGGAATGAAAAACCAGTTCAATCTCCATGAGCTGAAAATGAAGGGCCCTGAGCCAGTGGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000406757.2
ENST00000631057.2
ENST00000666017.1
ENST00000666673.1
ENST00000667662.1
ENST00000669691.1
CDS CAA 72 bp AGTTCTTCAAGGGACAGAATGTATTCTCTCCAGTACTaGTCAATCTCCACCACACCTGCCATACAGCCTTGC +
Preference number: 6 (lower is better)
Translates to: SSSRDRMYSLQY*SISTTPAIQPC
Trigger: GCAAGGCTGTATGGCAGGTGTGGTGGAGATTGACAAGTACTGGAGAGAATACATTCTGTCCCTTGAAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000406757.2
ENST00000631057.2
ENST00000666673.1
CDS TCA 72 bp ATTCAGAGCCTGAAGGAAGATCCTAGTGACTTGCAGTaGCTTGGAAACCTGGGTCATAATAAGCTTGGGGAA +
Preference number: 6 (lower is better)
Translates to: IQSLKEDPSDLQ*LGNLGHNKLGE
Trigger: TTCCCCAAGCTTATTATGACCCAGGTTTCCAAGTCACTGCAAGTCACTAGGATCTTCCTTCAGGCTCTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000631057.2
CDS TCA 72 bp AGGAGCTGGTTAATGTGCTTCAGTTTGTCAATAATTTaGCTGACCACTGGCTCAGGGCCCTTCATTTTCAGC +
Preference number: 6 (lower is better)
Translates to: RSWLMCFSLSII*LTTGSGPFIFS
Trigger: GCTGAAAATGAAGGGCCCTGAGCCAGTGGTCAGTCAAATTATTGACAAACTGAAGCACATTAACCAGCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000406757.2
ENST00000631057.2
ENST00000666017.1
ENST00000666673.1
ENST00000667662.1
ENST00000669691.1
CDS TCA 72 bp GTCAGCACTAATCAGTTACCTGCAAGGAAGCGGAGCTaGTTCTTCACTTTTATCATTCCATCACCAGAGCCT +
Preference number: 6 (lower is better)
Translates to: VSTNQLPARKRS*FFTFIIPSPEP
Trigger: AGGCTCTGGTGATGGAATGATAAAAGTGAAGAATCAGCTCCGCTTCCTTGCAGGTAACTGATTAGTGCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406757.2
CDS CAA 72 bp CCTTCCTCATCCAGGTTTTTATCCAGAACTCTACCTTaGGGCATAGACATGGTTCTCAGGAGCTGGTTAATG +
Preference number: 6 (lower is better)
Translates to: PSSSRFLSRTLP*GIDMVLRSWLM
Trigger: CATTAACCAGCTCCTGAGAACCATGTCTATGCCCAAAGGTAGAGTTCTGGATAAAAACCTGGATGAGGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000406757.2
ENST00000631057.2
ENST00000666017.1
ENST00000666673.1
ENST00000667662.1
ENST00000669691.1
CDS TCA 72 bp GTGAGCATTCGGCCACAGTCCTTACTGAACTTCAGGTaGTCAGTTGTGTTGATCACTTCAATTCCAAGATTC +
Preference number: 6 (lower is better)
Translates to: VSIRPQSLLNFR*SVVLITSIPRF
Trigger: GAATCTTGGAATTGAAGTGATCAACACAACTGATCACCTGAAGTTCAGTAAGGACTGTGGCCGAATGCTCAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000631057.2
CDS GCA 72 bp TTGGCTGTATCACAAGCTCATGAGACGACCTCATGGTaGAAAAGTAGACCACTCCACATAGTGTCTATTTAC +
Preference number: 6 (lower is better)
Translates to: LAVSQAHETTSW*KSRPLHIVSIY
Trigger: GTAAATAGACACTATGTGGAGTGGTCTACTTTTGCACCATGAGGTCGTCTCATGAGCTTGTGATACAGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666017.1
CDS GCA 72 bp CTCATGGAGATTGAACTGGTTTTTCATTCCATTCCTTaGTGCCTTTTGGCTGTATCACAAGCTCATGAGACG +
Preference number: 6 (lower is better)
Translates to: LMEIELVFHSIP*CLLAVSQAHET
Trigger: CGTCTCATGAGCTTGTGATACAGCCAAAAGGCAGCAAGGAATGGAATGAAAAACCAGTTCAATCTCCATGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000666017.1
CDS CCA 72 bp TTCACCCACAAACTCAAAAGCTTGTGGAGTCAGGCTTaGGTAGTTGTTCTTGAACATGGCATTGGTGTAGTT +
Preference number: 6 (lower is better)
Translates to: FTHKLKSLWSQA*VVVLEHGIGVV
Trigger: AACTACACCAATGCCATGTTCAAGAACAACTACCCAAGCCTGACTCCACAAGCTTTTGAGTTTGTGGGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000631057.2
CDS CCA 72 bp GTGGTGGTCAGCTTTCCTGCATTCTTCTGGACATACTaGATAGAATCATGGATTGTTGAAAAGAGACCAAGC +
Preference number: 6 (lower is better)
Translates to: VVVSFPAFFWTY*IESWIVEKRPS
Trigger: GCTTGGTCTCTTTTCAACAATCCATGATTCTATCCAGTATGTCCAGAAGAATGCAGGAAAGCTGACCACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000406757.2
ENST00000631057.2
ENST00000666673.1
CDS CCA 72 bp CCCAGTCTAGTGGTGGTCAGCTTTCCTGCATTCTTCTaGACATACTGGATAGAATCATGGATTGTTGAAAAG +
Preference number: 6 (lower is better)
Translates to: PSLVVVSFPAFF*TYWIESWIVEK
Trigger: CTTTTCAACAATCCATGATTCTATCCAGTATGTCCAGAAGAATGCAGGAAAGCTGACCACCACTAGACTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666673.1
CDS CCA 72 bp GCATTCACATTAAAGAAGTCCTTTCAGCTTCACACTTaGGAAACATCAGGCTATGCTGGGAGACTTGAGTCT +
Preference number: 6 (lower is better)
Translates to: AFTLKKSFQLHT*ETSGYAGRLES
Trigger: AGACTCAAGTCTCCCAGCATAGCCTGATGTTTCCCAAGTGTGAAGCTGAAAGGACTTCTTTAATGTGAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667662.1
CDS CAA 90 bp GTAGAGAGACACATCTGTGAAAAATTCACCCACAAACTCAAAAGCTaGTGGAGTCAGGCTTGGGTAGTTGTTCTTGAACATGGCATTGGT +
Preference number: 6 (lower is better)
Translates to: VERHICEKFTHKLKS*WSQAWVVVLEHGIG
Trigger: ACCAATGCCATGTTCAAGAACAACTACCCAAGCCTGACTCCACAAGCTTTTGAGTTTGTGGGTGAATTTTTCACAGATGTGTCTCTCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000631057.2
CDS TCA 72 bp GTTGTGTTGATCACTTCAATTCCAAGATTCAGAGCCTaGAGGAAGATCCTAGTGACTTGCAGTGACTTGGAA +
Preference number: 6 (lower is better)
Translates to: VVLITSIPRFRA*RKILVTCSDLE
Trigger: TTCCAAGTCACTGCAAGTCACTAGGATCTTCCTTCAGGCTCTGAATCTTGGAATTGAAGTGATCAACACAAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000631057.2
CDS CCA 72 bp ATCTGTGAAAAATTCACCCACAAACTCAAAAGCTTGTaGAGTCAGGCTTGGGTAGTTGTTCTTGAACATGGC +
Preference number: 6 (lower is better)
Translates to: ICEKFTHKLKSL*SQAWVVVLEHG
Trigger: GCCATGTTCAAGAACAACTACCCAAGCCTGACTCCACAAGCTTTTGAGTTTGTGGGTGAATTTTTCACAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000631057.2
CDS CCA 72 bp AGGAAGATCCTAGTGACTTGCAGTGACTTGGAAACCTaGGTCATAATAAGCTTGGGGAAATTCCCAAATACT +
Preference number: 6 (lower is better)
Translates to: RKILVTCSDLET*VIISLGKFPNT
Trigger: AGTATTTGGGAATTTCCCCAAGCTTATTATGACCCAGGTTTCCAAGTCACTGCAAGTCACTAGGATCTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000631057.2
CDS CAA 72 bp ACTTGCAGTGACTTGGAAACCTGGGTCATAATAAGCTaGGGGAAATTCCCAAATACTTTCAGGTCACGTCTT +
Preference number: 6 (lower is better)
Translates to: TCSDLETWVIIS*GKFPNTFRSRL
Trigger: AAGACGTGACCTGAAAGTATTTGGGAATTTCCCCAAGCTTATTATGACCCAGGTTTCCAAGTCACTGCAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000631057.2
CDS CCA 72 bp TTGCCAATAGTGGTGGTCAGCTTTCCTGCATTCTTCTaGACATACTGGATAGAATCATGGATTGTTGAAAAG +
Preference number: 6 (lower is better)
Translates to: LPIVVVSFPAFF*TYWIESWIVEK
Trigger: CTTTTCAACAATCCATGATTCTATCCAGTATGTCCAGAAGAATGCAGGAAAGCTGACCACCACTATTGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370818.8
ENST00000406757.2
ENST00000631057.2
CDS CCA 72 bp TCAGTTTCAGTGGTGGTCAGCTTTCCTGCATTCTTCTaGACATACTGGATAGAATCATGGATTGTTGAAAAG +
Preference number: 6 (lower is better)
Translates to: SVSVVVSFPAFF*TYWIESWIVEK
Trigger: CTTTTCAACAATCCATGATTCTATCCAGTATGTCCAGAAGAATGCAGGAAAGCTGACCACCACTGAAACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394299.7
CDS CAA 72 bp CACATCTGTGAAAAATTCACCCACAAACTCAAAAGCTaGTGGAGTCAGGCTTGGGTAGTTGTTCTTGAACAT +
Preference number: 6 (lower is better)
Translates to: HICEKFTHKLKS*WSQAWVVVLEH
Trigger: ATGTTCAAGAACAACTACCCAAGCCTGACTCCACAAGCTTTTGAGTTTGTGGGTGAATTTTTCACAGATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370818.8
ENST00000394299.7
ENST00000631057.2