RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPBP1L1 (Homo sapiens)

Ensembl gene IDs: ENSG00000159592

Ensembl transcript IDs: ENST00000290795.7, ENST00000355105.8, ENST00000460859.1, ENST00000467032.1, ENST00000468724.1, ENST00000479235.5, ENST00000480083.5, ENST00000480941.1, ENST00000487436.1, ENST00000488278.5, ENST00000493083.5, ENST00000495616.1, ENST00000496278.1, ENST00000498128.1

Found 224 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp CAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAGTAGAAGCTGTTGCTaGAGACCAGTGTCTCCTCTT +
Preference number: 2 (lower is better)
Translates to: QSTLNIKAARITQHFLYPSRSCC*RPVSPL
Trigger: AAGAGGAGACACTGGTCTGCAGCAACAGCTTCTACT...TGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
3UTR-3UTR CCA 90 bp ACAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCACACACAGAGTTTACTaGGTCAGATTTAACTGTGAG +
Preference number: 2 (lower is better)
Translates to: TIHPEYQGCKNNTTFPISTHRVY*VRFNCE
Trigger: CTCACAGTTAAATCTGACCCAGTAAACTCTGTGTGT...GGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
3UTR-3UTR CCA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATACACACAGAGTTTACTaGGTCAGATTTAACTGTGAG +
Preference number: 2 (lower is better)
Translates to: STLNIKAARITQHFLYPNTHRVY*VRFNCE
Trigger: CTCACAGTTAAATCTGACCCAGTAAACTCTGTGTGT...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
3UTR-3UTR CCA 90 bp CAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCACAATTGCTCTCTCTTTaGGATATGATTATTTCCCTT +
Preference number: 2 (lower is better)
Translates to: QSTLNIKAARITQHFLYPQLLSL*DMIISL
Trigger: AAGGGAAATAATCATATCCCAAAGAGAGAGCAATTG...TGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
3UTR-3UTR CCA 90 bp ATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAACAATTGCTCTCTCTTTaGGATATGATTATTTCCCTT +
Preference number: 2 (lower is better)
Translates to: IHPEYQGCKNNTTFPISKQLLSL*DMIISL
Trigger: AAGGGAAATAATCATATCCCAAAGAGAGAGCAATTG...TTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp CAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAGCAGCGGCGGAGCTATaGCCAGGGACTAGACGCTGC +
Preference number: 4 (lower is better)
Translates to: QSTLNIKAARITQHFLYPAAAEL*PGTRRC
Trigger: GCAGCGTCTAGTCCCTGGCCATAGCTCCGCCGCTGC...TGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR TCA 90 bp CAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAACTAGACGCTGCGTCTaGGGACGCGTCCCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: QSTLNIKAARITQHFLYPTRRCV*GRVPSL
Trigger: CAAGCTGGGGACGCGTCCTCAGACGCAGCGTCTAGT...TGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR TCA 90 bp ACAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCACTAGACGCTGCGTCTaGGGACGCGTCCCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: TIHPEYQGCKNNTTFPISTRRCV*GRVPSL
Trigger: CAAGCTGGGGACGCGTCCTCAGACGCAGCGTCTAGT...GGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATGCAGCGGCGGAGCTATaGCCAGGGACTAGACGCTGC +
Preference number: 4 (lower is better)
Translates to: STLNIKAARITQHFLYPNAAAEL*PGTRRC
Trigger: GCAGCGTCTAGTCCCTGGCCATAGCTCCGCCGCTGC...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR GCA 90 bp ACAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCGGCGATGGTTCCCTGTaGCACCTCCACTACGTTGGC +
Preference number: 4 (lower is better)
Translates to: TIHPEYQGCKNNTTFPISGDGSL*HLHYVG
Trigger: GCCAACGTAGTGGAGGTGGCACAGGGAACCATCGCC...GGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR GCA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATGGCGATGGTTCCCTGTaGCACCTCCACTACGTTGGC +
Preference number: 4 (lower is better)
Translates to: STLNIKAARITQHFLYPNGDGSL*HLHYVG
Trigger: GCCAACGTAGTGGAGGTGGCACAGGGAACCATCGCC...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp ACAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCCTCGAGTCGGCCAGCTaGATCTCCCACAAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: TIHPEYQGCKNNTTFPISLESAS*ISHKVS
Trigger: GGAAACCTTGTGGGAGATCCAGCTGGCCGACTCGAG...GGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp ACAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCCGGAACAGGGAGGGCTaGTGCCAAGAATCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: TIHPEYQGCKNNTTFPISRNREG*CQESPA
Trigger: TGCAGGAGATTCTTGGCACCAGCCCTCCCTGTTCCG...GGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp CAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCACGGAACAGGGAGGGCTaGTGCCAAGAATCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: QSTLNIKAARITQHFLYPRNREG*CQESPA
Trigger: TGCAGGAGATTCTTGGCACCAGCCCTCCCTGTTCCG...TGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp ACAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCTTGGAGGGGTGGTGCTaGAGGGACTCTCTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: TIHPEYQGCKNNTTFPISLEGWC*RDSLWE
Trigger: CTCCCAAAGAGAGTCCCTCCAGCACCACCCCTCCAA...GGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp ACAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCCACTCTTCCTGTCGGTaGTTCGGCGGGTCAACTTGG +
Preference number: 4 (lower is better)
Translates to: TIHPEYQGCKNNTTFPISHSSCR*FGGSTW
Trigger: CCAAGTTGACCCGCCGAACCACCGACAGGAAGAGTG...GGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR TCA 90 bp ACAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCTCAGACGAGAGGAGCTaGTCTCAATTGGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: TIHPEYQGCKNNTTFPISSDERS*SQLEGW
Trigger: CCACCCCTCCAATTGAGATCAGCTCCTCTCGTCTGA...GGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR GCA 90 bp ACAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCCCTCGGGAAGAGCTATaGCAACCAGATGGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: TIHPEYQGCKNNTTFPISPREEL*QPDGFP
Trigger: AGGGAACCCATCTGGTTGGCATAGCTCTTCCCGAGG...GGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR GCA 90 bp CAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCACCTCGGGAAGAGCTATaGCAACCAGATGGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: QSTLNIKAARITQHFLYPPREEL*QPDGFP
Trigger: AGGGAACCCATCTGGTTGGCATAGCTCTTCCCGAGG...TGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR GCA 90 bp CAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCATCCGGGAGTGGAAGCTaGCATTCCAATGGCGATGGT +
Preference number: 4 (lower is better)
Translates to: QSTLNIKAARITQHFLYPSGSGS*HSNGDG
Trigger: ACCATCGCCATTGGAATGGCAGCTTCCACTCCCGGA...TGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR GCA 90 bp ACAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCCAATTGGAGGGGTGGTaGTGGAGGGACTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: TIHPEYQGCKNNTTFPISQLEGW*WRDSLW
Trigger: CCAAAGAGAGTCCCTCCAGCACCACCCCTCCAATTG...GGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp ATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAACTCGAGTCGGCCAGCTaGATCTCCCACAAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: IHPEYQGCKNNTTFPISKLESAS*ISHKVS
Trigger: GGAAACCTTGTGGGAGATCCAGCTGGCCGACTCGAG...TTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp ATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAAGAGTCCACAGAATCATaGCGGAACAGGGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: IHPEYQGCKNNTTFPISKESTES*RNREGW
Trigger: CCAGCCCTCCCTGTTCCGCCATGATTCTGTGGACTC...TTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATGAGTCCACAGAATCATaGCGGAACAGGGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: STLNIKAARITQHFLYPNESTES*RNREGW
Trigger: CCAGCCCTCCCTGTTCCGCCATGATTCTGTGGACTC...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp ACAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCCCATTCCAATGGCGATaGTTCCCTGTGCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: TIHPEYQGCKNNTTFPISPFQWR*FPVPPP
Trigger: TGGAGGTGGCACAGGGAACCATCGCCATTGGAATGG...GGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp CAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCACACCCTTTCCGGGAGTaGAAGCTGCCATTCCAATGG +
Preference number: 4 (lower is better)
Translates to: QSTLNIKAARITQHFLYPHPFRE*KLPFQW
Trigger: CCATTGGAATGGCAGCTTCCACTCCCGGAAAGGGTG...TGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp ATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATTGGAGGGGTGGTGCTaGAGGGACTCTCTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: IHPEYQGCKNNTTFPISKLEGWC*RDSLWE
Trigger: CTCCCAAAGAGAGTCCCTCCAGCACCACCCCTCCAA...TTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp ATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAACACTCTTCCTGTCGGTaGTTCGGCGGGTCAACTTGG +
Preference number: 4 (lower is better)
Translates to: IHPEYQGCKNNTTFPISKHSSCR*FGGSTW
Trigger: CCAAGTTGACCCGCCGAACCACCGACAGGAAGAGTG...TTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR TCA 90 bp CAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCACTCCTTTCAGTAAGGTaGGGCATCCAACCTCATGGC +
Preference number: 4 (lower is better)
Translates to: QSTLNIKAARITQHFLYPLLSVR*GIQPHG
Trigger: GCCATGAGGTTGGATGCCTCACCTTACTGAAAGGAG...TGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR TCA 90 bp ATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATGGCTCATGCCATCATaGCCTCGGGAAGAGCTATGC +
Preference number: 4 (lower is better)
Translates to: IHPEYQGCKNNTTFPISKWLMPS*PREELC
Trigger: GCATAGCTCTTCCCGAGGTCATGATGGCATGAGCCA...TTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR TCA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATTGGCTCATGCCATCATaGCCTCGGGAAGAGCTATGC +
Preference number: 4 (lower is better)
Translates to: STLNIKAARITQHFLYPNWLMPS*PREELC
Trigger: GCATAGCTCTTCCCGAGGTCATGATGGCATGAGCCA...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR TCA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATTCAGACGAGAGGAGCTaGTCTCAATTGGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: STLNIKAARITQHFLYPNSDERS*SQLEGW
Trigger: CCACCCCTCCAATTGAGATCAGCTCCTCTCGTCTGA...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR GCA 90 bp ACAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCCACTACGTTGGCTCATaGCATCATGACCTCGGGAAG +
Preference number: 4 (lower is better)
Translates to: TIHPEYQGCKNNTTFPISHYVGS*HHDLGK
Trigger: CTTCCCGAGGTCATGATGGCATGAGCCAACGTAGTG...GGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR GCA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATTCCGGGAGTGGAAGCTaGCATTCCAATGGCGATGGT +
Preference number: 4 (lower is better)
Translates to: STLNIKAARITQHFLYPNSGSGS*HSNGDG
Trigger: ACCATCGCCATTGGAATGGCAGCTTCCACTCCCGGA...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp CAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAGCTATGCCAACCAGATaGGTTCCCTGTGATTCCAGC +
Preference number: 4 (lower is better)
Translates to: QSTLNIKAARITQHFLYPAMPTR*VPCDSS
Trigger: GCTGGAATCACAGGGAACCCATCTGGTTGGCATAGC...TGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp ATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAACCATTCCAATGGCGATaGTTCCCTGTGCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: IHPEYQGCKNNTTFPISKPFQWR*FPVPPP
Trigger: TGGAGGTGGCACAGGGAACCATCGCCATTGGAATGG...TTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATCACCCTTTCCGGGAGTaGAAGCTGCCATTCCAATGG +
Preference number: 4 (lower is better)
Translates to: STLNIKAARITQHFLYPNHPFRE*KLPFQW
Trigger: CCATTGGAATGGCAGCTTCCACTCCCGGAAAGGGTG...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp CAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCACCCAATAGGTCTGCATaGCTGATGCTGTTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: QSTLNIKAARITQHFLYPPNRSA*LMLFAS
Trigger: GCTGGCAAACAGCATCAGCCATGCAGACCTATTGGG...TGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp CAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCATGGAGGGACTCTCTTTaGGAGAACTCAGAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: QSTLNIKAARITQHFLYPWRDSL*ENSELH
Trigger: GTGCAGCTCTGAGTTCTCCCAAAGAGAGTCCCTCCA...TGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp ACAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCTCTCAATTGGAGGGGTaGTGCTGGAGGGACTCTCTT +
Preference number: 4 (lower is better)
Translates to: TIHPEYQGCKNNTTFPISSQLEG*CWRDSL
Trigger: AAGAGAGTCCCTCCAGCACCACCCCTCCAATTGAGA...GGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR TCA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATCAGATGGGTTCCCTGTaGTTCCAGCATATGCTCCCT +
Preference number: 4 (lower is better)
Translates to: STLNIKAARITQHFLYPNQMGSL*FQHMLP
Trigger: AGGGAGCATATGCTGGAATCACAGGGAACCCATCTG...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR TCA 90 bp ATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAACAGATGGGTTCCCTGTaGTTCCAGCATATGCTCCCT +
Preference number: 4 (lower is better)
Translates to: IHPEYQGCKNNTTFPISKQMGSL*FQHMLP
Trigger: AGGGAGCATATGCTGGAATCACAGGGAACCCATCTG...TTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR TCA 90 bp CAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAATAGGTCTGCATGGCTaGTGCTGTTTGCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: QSTLNIKAARITQHFLYPIGLHG*CCLPAS
Trigger: AGAAGCTGGCAAACAGCATCAGCCATGCAGACCTAT...TGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR TCA 90 bp CAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAGAGGAAAGGGATCCTaGCTTGTGCTCCATCCTGTT +
Preference number: 4 (lower is better)
Translates to: QSTLNIKAARITQHFLYPRGKGS*LVLHPV
Trigger: AACAGGATGGAGCACAAGTCAGGATCCCTTTCCTCT...TGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR GCA 90 bp ACAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCTCTCCTCTGGGTAGGTaGTCTCCGTGTTTTTCGAAG +
Preference number: 4 (lower is better)
Translates to: TIHPEYQGCKNNTTFPISSPLGR*SPCFSK
Trigger: CTTCGAAAAACACGGAGAGCACCTACCCAGAGGAGA...GGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR GCA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATAACAGGGAGGGCTGGTaGCAAGAATCTCCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: STLNIKAARITQHFLYPNNREGW*QESPAV
Trigger: AACTGCAGGAGATTCTTGGCACCAGCCCTCCCTGTT...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR GCA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATCACTACGTTGGCTCATaGCATCATGACCTCGGGAAG +
Preference number: 4 (lower is better)
Translates to: STLNIKAARITQHFLYPNHYVGS*HHDLGK
Trigger: CTTCCCGAGGTCATGATGGCATGAGCCAACGTAGTG...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR GCA 90 bp ATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAAAGCATCTTGGAGGGTTaGTTGGCACTAGGCGGGTTT +
Preference number: 4 (lower is better)
Translates to: IHPEYQGCKNNTTFPISKSILEG*LALGGF
Trigger: AAACCCGCCTAGTGCCAAGCAACCCTCCAAGATGCT...TTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR GCA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATAGCATCTTGGAGGGTTaGTTGGCACTAGGCGGGTTT +
Preference number: 4 (lower is better)
Translates to: STLNIKAARITQHFLYPNSILEG*LALGGF
Trigger: AAACCCGCCTAGTGCCAAGCAACCCTCCAAGATGCT...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR GCA 90 bp ACAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCCTGGAACTGCGGCTCTaGAAGAAGCCATTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: TIHPEYQGCKNNTTFPISLELRL*KKPFFP
Trigger: TGGAAAGAATGGCTTCTTGCAGAGCCGCAGTTCCAG...GGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR GCA 90 bp CAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCACCTCAAACTCTGCTTTaGAAGTGCTTCTCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: QSTLNIKAARITQHFLYPPQTLL*KCFSKG
Trigger: CCCCTTGGAGAAGCACTTGCAAAGCAGAGTTTGAGG...TGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR GCA 90 bp ACAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCCCTCAAACTCTGCTTTaGAAGTGCTTCTCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: TIHPEYQGCKNNTTFPISPQTLL*KCFSKG
Trigger: CCCCTTGGAGAAGCACTTGCAAAGCAGAGTTTGAGG...GGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp ATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAAGCTATGCCAACCAGATaGGTTCCCTGTGATTCCAGC +
Preference number: 4 (lower is better)
Translates to: IHPEYQGCKNNTTFPISKAMPTR*VPCDSS
Trigger: GCTGGAATCACAGGGAACCCATCTGGTTGGCATAGC...TTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR TCA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATATAGGTCTGCATGGCTaGTGCTGTTTGCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: STLNIKAARITQHFLYPNIGLHG*CCLPAS
Trigger: AGAAGCTGGCAAACAGCATCAGCCATGCAGACCTAT...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR TCA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATATGGTGAGATCCTGGTaGGGTGAATGCAGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: STLNIKAARITQHFLYPNMVRSW*GECSRE
Trigger: TTCTCTGCTGCATTCACCTCACCAGGATCTCACCAT...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR TCA 90 bp ATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAAATGGTGAGATCCTGGTaGGGTGAATGCAGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: IHPEYQGCKNNTTFPISKMVRSW*GECSRE
Trigger: TTCTCTGCTGCATTCACCTCACCAGGATCTCACCAT...TTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR TCA 90 bp ACAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCTTCCCATTTGCATGGTaGGATCCTGGTGAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: TIHPEYQGCKNNTTFPISFPFAW*DPGEVN
Trigger: ATTCACCTCACCAGGATCTCACCATGCAAATGGGAA...GGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR TCA 90 bp ATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAAAGAGGAAAGGGATCCTaGCTTGTGCTCCATCCTGTT +
Preference number: 4 (lower is better)
Translates to: IHPEYQGCKNNTTFPISKRGKGS*LVLHPV
Trigger: AACAGGATGGAGCACAAGTCAGGATCCCTTTCCTCT...TTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR TCA 90 bp ACAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCACAGTCTCTATTCTCTaGGAAGTCTCCATTCCGGTC +
Preference number: 4 (lower is better)
Translates to: TIHPEYQGCKNNTTFPISTVSIL*EVSIPV
Trigger: GACCGGAATGGAGACTTCTCAGAGAATAGAGACTGT...GGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR TCA 90 bp CAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAACTGGTTTCGGTGTCTaGGTCCTCAAACTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: QSTLNIKAARITQHFLYPTGFGV*VLKLCF
Trigger: AAAGCAGAGTTTGAGGACTCAGACACCGAAACCAGT...TGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR GCA 90 bp ACAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCTCCTTGTTAAAAGGGTaGTTAAGTAACCTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: TIHPEYQGCKNNTTFPISSLLKG*LSNLAG
Trigger: GCCGGCCAGGTTACTTAAGCACCCTTTTAACAAGGA...GGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR GCA 90 bp ATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATCTCCTCTGGGTAGGTaGTCTCCGTGTTTTTCGAAG +
Preference number: 4 (lower is better)
Translates to: IHPEYQGCKNNTTFPISKSPLGR*SPCFSK
Trigger: CTTCGAAAAACACGGAGAGCACCTACCCAGAGGAGA...TTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR GCA 90 bp CAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCACCTGTTAGCTTTCCATaGATTAGGCTTGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: QSTLNIKAARITQHFLYPPVSFP*IRLGRR
Trigger: CCTCCTTCCAAGCCTAATGCATGGAAAGCTAACAGG...TGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR TCA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATACAGTCTCTATTCTCTaGGAAGTCTCCATTCCGGTC +
Preference number: 4 (lower is better)
Translates to: STLNIKAARITQHFLYPNTVSIL*EVSIPV
Trigger: GACCGGAATGGAGACTTCTCAGAGAATAGAGACTGT...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR TCA 90 bp ATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAAACTGGTTTCGGTGTCTaGGTCCTCAAACTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: IHPEYQGCKNNTTFPISKTGFGV*VLKLCF
Trigger: AAAGCAGAGTTTGAGGACTCAGACACCGAAACCAGT...TTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR GCA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATTCCTTGTTAAAAGGGTaGTTAAGTAACCTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: STLNIKAARITQHFLYPNSLLKG*LSNLAG
Trigger: GCCGGCCAGGTTACTTAAGCACCCTTTTAACAAGGA...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR GCA 90 bp ATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAAATGGCTGATGCTGTTTaGCAGCTTCTGGATTCAAGG +
Preference number: 4 (lower is better)
Translates to: IHPEYQGCKNNTTFPISKMADAV*QLLDSR
Trigger: CCTTGAATCCAGAAGCTGGCAAACAGCATCAGCCAT...TTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR GCA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATATGGCTGATGCTGTTTaGCAGCTTCTGGATTCAAGG +
Preference number: 4 (lower is better)
Translates to: STLNIKAARITQHFLYPNMADAV*QLLDSR
Trigger: CCTTGAATCCAGAAGCTGGCAAACAGCATCAGCCAT...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR GCA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATAGGGATCCTGACTTGTaGTCCATCCTGTTAGCTTTC +
Preference number: 4 (lower is better)
Translates to: STLNIKAARITQHFLYPNRDPDL*SILLAF
Trigger: GAAAGCTAACAGGATGGAGCACAAGTCAGGATCCCT...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR GCA 90 bp ACAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCCCTTTGGTTCAGGTGTaGTGTTGTCCTCCAAATCTT +
Preference number: 4 (lower is better)
Translates to: TIHPEYQGCKNNTTFPISPLVQV*CCPPNL
Trigger: AAGATTTGGAGGACAACAGCACACCTGAACCAAAGG...GGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR GCA 90 bp CAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCACCATTTCTTCTCAGCTaGTCTGTCTTCATGTGGAAC +
Preference number: 4 (lower is better)
Translates to: QSTLNIKAARITQHFLYPPFLLS*SVFMWN
Trigger: GTTCCACATGAAGACAGAGCAGCTGAGAAGAAATGG...TGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp CAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCACTGTTTGCCAGCTTCTaGATTCAAGGAAGGAAAGTC +
Preference number: 4 (lower is better)
Translates to: QSTLNIKAARITQHFLYPLFASF*IQGRKV
Trigger: GACTTTCCTTCCTTGAATCCAGAAGCTGGCAAACAG...TGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp ACAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCACTAGCCAGTACCACTaGTTTGGTAACAGAGATTGG +
Preference number: 4 (lower is better)
Translates to: TIHPEYQGCKNNTTFPISTSQYH*FGNRDW
Trigger: CCAATCTCTGTTACCAAACCAGTGGTACTGGCTAGT...GGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp ACAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCTGCTCTGTCTTCATGTaGAACTCTTTGAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: TIHPEYQGCKNNTTFPISCSVFM*NSLSSS
Trigger: GGATGAGCTCAAAGAGTTCCACATGAAGACAGAGCA...GGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp ACAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCATGTTTCACTGCTACTaGTTTCGGTGTCTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: TIHPEYQGCKNNTTFPISMFHCY*FRCLSP
Trigger: AGGACTCAGACACCGAAACCAGTAGCAGTGAAACAT...GGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR TCA 90 bp CAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAAACTATTTGGTTCCTaGCACGTTTCCAAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: QSTLNIKAARITQHFLYPKLFGS*HVSKRG
Trigger: TCCCCTTTTGGAAACGTGTCAGGAACCAAATAGTTT...TGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR TCA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATACTTGGAACCACGGATaGCAATTTGTTCCCATTTGC +
Preference number: 4 (lower is better)
Translates to: STLNIKAARITQHFLYPNTWNHG*QFVPIC
Trigger: GCAAATGGGAACAAATTGTCATCCGTGGTTCCAAGT...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR GCA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATTGTGATTCCAGCATATaGTCCCTTAGAGACACCAGA +
Preference number: 4 (lower is better)
Translates to: STLNIKAARITQHFLYPNCDSSI*SLRDTR
Trigger: TCTGGTGTCTCTAAGGGAGCATATGCTGGAATCACA...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR GCA 90 bp ATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATGTGATTCCAGCATATaGTCCCTTAGAGACACCAGA +
Preference number: 4 (lower is better)
Translates to: IHPEYQGCKNNTTFPISKCDSSI*SLRDTR
Trigger: TCTGGTGTCTCTAAGGGAGCATATGCTGGAATCACA...TTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR GCA 90 bp ATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAACCTTTGGTTCAGGTGTaGTGTTGTCCTCCAAATCTT +
Preference number: 4 (lower is better)
Translates to: IHPEYQGCKNNTTFPISKPLVQV*CCPPNL
Trigger: AAGATTTGGAGGACAACAGCACACCTGAACCAAAGG...TTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR GCA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATCCATTTCTTCTCAGCTaGTCTGTCTTCATGTGGAAC +
Preference number: 4 (lower is better)
Translates to: STLNIKAARITQHFLYPNPFLLS*SVFMWN
Trigger: GTTCCACATGAAGACAGAGCAGCTGAGAAGAAATGG...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp ATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAACTGTTTGCCAGCTTCTaGATTCAAGGAAGGAAAGTC +
Preference number: 4 (lower is better)
Translates to: IHPEYQGCKNNTTFPISKLFASF*IQGRKV
Trigger: GACTTTCCTTCCTTGAATCCAGAAGCTGGCAAACAG...TTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATACTAGCCAGTACCACTaGTTTGGTAACAGAGATTGG +
Preference number: 4 (lower is better)
Translates to: STLNIKAARITQHFLYPNTSQYH*FGNRDW
Trigger: CCAATCTCTGTTACCAAACCAGTGGTACTGGCTAGT...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATTGCTCTGTCTTCATGTaGAACTCTTTGAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: STLNIKAARITQHFLYPNCSVFM*NSLSSS
Trigger: GGATGAGCTCAAAGAGTTCCACATGAAGACAGAGCA...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR TCA 90 bp ACAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCCACTTCACAATCATTTaGAAGGCCACACGAATCTAT +
Preference number: 4 (lower is better)
Translates to: TIHPEYQGCKNNTTFPISHFTII*KATRIY
Trigger: ATAGATTCGTGTGGCCTTTCAAATGATTGTGAAGTG...GGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR TCA 90 bp ACAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCCACTGGAAGGAGATATaGAGAATCTTCTATGCTTTG +
Preference number: 4 (lower is better)
Translates to: TIHPEYQGCKNNTTFPISHWKEI*RIFYAL
Trigger: CAAAGCATAGAAGATTCTTCATATCTCCTTCCAGTG...GGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR TCA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATAAACTATTTGGTTCCTaGCACGTTTCCAAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: STLNIKAARITQHFLYPNKLFGS*HVSKRG
Trigger: TCCCCTTTTGGAAACGTGTCAGGAACCAAATAGTTT...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR GCA 90 bp ATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAAGCTTTCAATAACCTGTaGTCTGCTTCTAGAGAGTGT +
Preference number: 4 (lower is better)
Translates to: IHPEYQGCKNNTTFPISKAFNNL*SASREC
Trigger: ACACTCTCTAGAAGCAGAGCACAGGTTATTGAAAGC...TTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp CAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAGATGGGCTCAAGTGTaGACAAATAATGTCATCAAG +
Preference number: 4 (lower is better)
Translates to: QSTLNIKAARITQHFLYPRWAQV*TNNVIK
Trigger: CTTGATGACATTATTTGTCCACACTTGAGCCCATCT...TGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp ATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAACCTAATCTCCATAGGTaGCTTTTCCTGAAAAGCACA +
Preference number: 4 (lower is better)
Translates to: IHPEYQGCKNNTTFPISKPNLHR*LFLKST
Trigger: TGTGCTTTTCAGGAAAAGCCACCTATGGAGATTAGG...TTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATCCTAATCTCCATAGGTaGCTTTTCCTGAAAAGCACA +
Preference number: 4 (lower is better)
Translates to: STLNIKAARITQHFLYPNPNLHR*LFLKST
Trigger: TGTGCTTTTCAGGAAAAGCCACCTATGGAGATTAGG...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp CAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAACACACAGAGTTTACTaGGTCAGATTTAACTGTGAG +
Preference number: 4 (lower is better)
Translates to: QSTLNIKAARITQHFLYPTHRVY*VRFNCE
Trigger: CTCACAGTTAAATCTGACCCAGTAAACTCTGTGTGT...TGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR TCA 90 bp ATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAACACTTCACAATCATTTaGAAGGCCACACGAATCTAT +
Preference number: 4 (lower is better)
Translates to: IHPEYQGCKNNTTFPISKHFTII*KATRIY
Trigger: ATAGATTCGTGTGGCCTTTCAAATGATTGTGAAGTG...TTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR TCA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATTTTTACAATCCACCCTaGATATCAAGGCTGCAAGAA +
Preference number: 4 (lower is better)
Translates to: STLNIKAARITQHFLYPNFYNPP*ISRLQE
Trigger: TTCTTGCAGCCTTGATATTCAGGGTGGATTGTAAAA...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR GCA 90 bp CAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAAGTTAGTTATTTTATaGAGTAGTTTCCCCCTCGAG +
Preference number: 4 (lower is better)
Translates to: QSTLNIKAARITQHFLYPKLVIL*SSFPLE
Trigger: CTCGAGGGGGAAACTACTGCATAAAATAACTAACTT...TGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp ATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATTTGGTAACAGAGATTaGACTGGTAAAAGCAGACTC +
Preference number: 4 (lower is better)
Translates to: IHPEYQGCKNNTTFPISKFGNRD*TGKSRL
Trigger: GAGTCTGCTTTTACCAGTCCAATCTCTGTTACCAAA...TTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR GCA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATAAGTTAGTTATTTTATaGAGTAGTTTCCCCCTCGAG +
Preference number: 4 (lower is better)
Translates to: STLNIKAARITQHFLYPNKLVIL*SSFPLE
Trigger: CTCGAGGGGGAAACTACTGCATAAAATAACTAACTT...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp ACAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCGAACGATGGGTAGGATaGATATTAAGAAATAGTCAA +
Preference number: 4 (lower is better)
Translates to: TIHPEYQGCKNNTTFPISERWVG*ILRNSQ
Trigger: TTGACTATTTCTTAATATCCATCCTACCCATCGTTC...GGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CCA 90 bp CAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAGAACGATGGGTAGGATaGATATTAAGAAATAGTCAA +
Preference number: 4 (lower is better)
Translates to: QSTLNIKAARITQHFLYPERWVG*ILRNSQ
Trigger: TTGACTATTTCTTAATATCCATCCTACCCATCGTTC...TGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS TCA 90 bp ACTCGGGCAGCGGCGGAGCTATGGCCAGGGACTAGACGCTGCGTCTaGGGACGCGTCCCCAGCTTGTCGACCCGGCAGAGGCGGCTAGTC +
Preference number: 5 (lower is better)
Translates to: TRAAAELWPGTRRCV*GRVPSLSTRQRRLV
Trigger: GACTAGCCGCCTCTGCCGGGTCGACAAGCTGGGGACGCGTCCTCAGACGCAGCGTCTAGTCCCTGGCCATAGCTCCGCCGCTGCCCGAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290795.7
CDS TCA 90 bp CAACGGGCAGCGGCGGAGCTATGGCCAGGGACTAGACGCTGCGTCTaGGGACGCGTCCCCAGCTTGTCGACCCGGCAGAGGCGGCTAGTC +
Preference number: 5 (lower is better)
Translates to: QRAAAELWPGTRRCV*GRVPSLSTRQRRLV
Trigger: GACTAGCCGCCTCTGCCGGGTCGACAAGCTGGGGACGCGTCCTCAGACGCAGCGTCTAGTCCCTGGCCATAGCTCCGCCGCTGCCCGTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355105.8
ENST00000480083.5
CDS TCA 90 bp GGCCCTTTCCCACCTTCCGCTCCTTACTTCTCGTGTGCGCGTCGTTaGGACTCCAGTCCCCAGCGGGCCACACGGCCTGGCCCCGGAGGC +
Preference number: 5 (lower is better)
Translates to: GPFPPSAPYFSCARR*DSSPQRATRPGPGG
Trigger: GCCTCCGGGGCCAGGCCGTGTGGCCCGCTGGGGACTGGAGTCTCAACGACGCGCACACGAGAAGTAAGGAGCGGAAGGTGGGAAAGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480941.1
ENST00000488278.5
CDS GCA 90 bp TGTGTTTTCCGGCCCTTTCCCACCTTCCGCTCCTTACTTCTCGTGTaGGCGTCGTTGAGACTCCAGTCCCCAGCGGGCCACACGGCCTGG +
Preference number: 5 (lower is better)
Translates to: CVFRPFPTFRSLLLV*ASLRLQSPAGHTAW
Trigger: CCAGGCCGTGTGGCCCGCTGGGGACTGGAGTCTCAACGACGCGCACACGAGAAGTAAGGAGCGGAAGGTGGGAAAGGGCCGGAAAACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480941.1
ENST00000488278.5
CDS TCA 90 bp TCCTGTCGGTGGTTCGGCGGGTCAACTTGGTCAGACGAGAGGAGCTaGTCTCAATTGGAGGGGTGGTGCTGGAGGGACTCTCTTTGGGAG +
Preference number: 5 (lower is better)
Translates to: SCRWFGGSTWSDERS*SQLEGWCWRDSLWE
Trigger: CTCCCAAAGAGAGTCCCTCCAGCACCACCCCTCCAATTGAGATCAGCTCCTCTCGTCTGACCAAGTTGACCCGCCGAACCACCGACAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000479235.5
CDS GCA 90 bp CTTTCCGGGAGTGGAAGCTGCCATTCCAATGGCGATGGTTCCCTGTaGCACCTCCACTACGTTGGCTCATGCCATCATGACCTCGGGAAG +
Preference number: 5 (lower is better)
Translates to: LSGSGSCHSNGDGSL*HLHYVGSCHHDLGK
Trigger: CTTCCCGAGGTCATGATGGCATGAGCCAACGTAGTGGAGGTGGCACAGGGAACCATCGCCATTGGAATGGCAGCTTCCACTCCCGGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000496278.1
ENST00000498128.1
CDS GCA 90 bp TCCAATGGCGATGGTTCCCTGTGCCACCTCCACTACGTTGGCTCATaGCATCATGACCTCGGGAAGAGCTATGCCAACCAGATGGGTTCC +
Preference number: 5 (lower is better)
Translates to: SNGDGSLCHLHYVGS*HHDLGKSYANQMGS
Trigger: GGAACCCATCTGGTTGGCATAGCTCTTCCCGAGGTCATGATGGCATGAGCCAACGTAGTGGAGGTGGCACAGGGAACCATCGCCATTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000496278.1
ENST00000498128.1
CDS TCA 90 bp CGATGGTTCCCTGTGCCACCTCCACTACGTTGGCTCATGCCATCATaGCCTCGGGAAGAGCTATGCCAACCAGATGGGTTCCCTGTGATT +
Preference number: 5 (lower is better)
Translates to: RWFPVPPPLRWLMPS*PREELCQPDGFPVI
Trigger: AATCACAGGGAACCCATCTGGTTGGCATAGCTCTTCCCGAGGTCATGATGGCATGAGCCAACGTAGTGGAGGTGGCACAGGGAACCATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000496278.1
ENST00000498128.1
CDS GCA 90 bp TGTCGACGGCGGCTTACTCCAAATCTACCTTCTCCTCTGGGTAGGTaGTCTCCGTGTTTTTCGAAGGTGGCAGTAGGTGACTTAGCTGAC +
Preference number: 5 (lower is better)
Translates to: CRRRLTPNLPSPLGR*SPCFSKVAVGDLAD
Trigger: GTCAGCTAAGTCACCTACTGCCACCTTCGAAAAACACGGAGAGCACCTACCCAGAGGAGAAGGTAGATTTGGAGTAAGCCGCCGTCGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS CCA 90 bp ATTCCAGCATATGCTCCCTTAGAGACACCAGAGTCCACAGAATCATaGCGGAACAGGGAGGGCTGGTGCCAAGAATCTCCTGCAGTTCGT +
Preference number: 5 (lower is better)
Translates to: IPAYAPLETPESTES*RNREGWCQESPAVR
Trigger: ACGAACTGCAGGAGATTCTTGGCACCAGCCCTCCCTGTTCCGCCATGATTCTGTGGACTCTGGTGTCTCTAAGGGAGCATATGCTGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000496278.1
ENST00000498128.1
CDS GCA 90 bp GAGTCGGCCAGCTGGATCTCCCACAAGGTTTCCTTGTTAAAAGGGTaGTTAAGTAACCTGGCCGGCAGCACGACTTATGATGAAGCACGA +
Preference number: 5 (lower is better)
Translates to: ESASWISHKVSLLKG*LSNLAGSTTYDEAR
Trigger: TCGTGCTTCATCATAAGTCGTGCTGCCGGCCAGGTTACTTAAGCACCCTTTTAACAAGGAAACCTTGTGGGAGATCCAGCTGGCCGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000495616.1
CDS GCA 90 bp GGAAGAGCTATGCCAACCAGATGGGTTCCCTGTGATTCCAGCATATaGTCCCTTAGAGACACCAGAGTCCACAGAATCATGGCGGAACAG +
Preference number: 5 (lower is better)
Translates to: GRAMPTRWVPCDSSI*SLRDTRVHRIMAEQ
Trigger: CTGTTCCGCCATGATTCTGTGGACTCTGGTGTCTCTAAGGGAGCATATGCTGGAATCACAGGGAACCCATCTGGTTGGCATAGCTCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000496278.1
ENST00000498128.1
CDS CCA 90 bp TTGGCTCATGCCATCATGACCTCGGGAAGAGCTATGCCAACCAGATaGGTTCCCTGTGATTCCAGCATATGCTCCCTTAGAGACACCAGA +
Preference number: 5 (lower is better)
Translates to: LAHAIMTSGRAMPTR*VPCDSSICSLRDTR
Trigger: TCTGGTGTCTCTAAGGGAGCATATGCTGGAATCACAGGGAACCCATCTGGTTGGCATAGCTCTTCCCGAGGTCATGATGGCATGAGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000496278.1
ENST00000498128.1
CDS-3UTR CAA 90 bp ATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAAGGACGCGTCCCCAGCTaGTCGACCCGGCAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: IHPEYQGCKNNTTFPISKGRVPS*STRQRR
Trigger: CCGCCTCTGCCGGGTCGACAAGCTGGGGACGCGTCC...TTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CAA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATGGACGCGTCCCCAGCTaGTCGACCCGGCAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: STLNIKAARITQHFLYPNGRVPS*STRQRR
Trigger: CCGCCTCTGCCGGGTCGACAAGCTGGGGACGCGTCC...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS TCA 90 bp GGGTTTTCCCATACTCCAGAAGGTGTCCCAATAGGTCTGCATGGCTaGTGCTGTTTGCCAGCTTCTGGATTCAAGGAAGGAAAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: GFSHTPEGVPIGLHG*CCLPASGFKEGKSS
Trigger: GGAGGACTTTCCTTCCTTGAATCCAGAAGCTGGCAAACAGCATCAGCCATGCAGACCTATTGGGACACCTTCTGGAGTATGGGAAAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS TCA 90 bp ACTCCATCCCATACTCCAGAAGGTGTCCCAATAGGTCTGCATGGCTaGTGCTGTTTGCCAGCTTCTGGATTCAAGGAAGGAAAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: TPSHTPEGVPIGLHG*CCLPASGFKEGKSS
Trigger: GGAGGACTTTCCTTCCTTGAATCCAGAAGCTGGCAAACAGCATCAGCCATGCAGACCTATTGGGACACCTTCTGGAGTATGGGATGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498128.1
CDS GCA 90 bp CTGGTAAAAGCAGACTCCCGGCTAGAGGAAAGGGATCCTGACTTGTaGTCCATCCTGTTAGCTTTCCATGCATTAGGCTTGGAAGGAGGT +
Preference number: 5 (lower is better)
Translates to: LVKADSRLEERDPDL*SILLAFHALGLEGG
Trigger: ACCTCCTTCCAAGCCTAATGCATGGAAAGCTAACAGGATGGAGCACAAGTCAGGATCCCTTTCCTCTAGCCGGGAGTCTGCTTTTACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS CCA 90 bp ACTCTCTTTGGGAGAACTCAGAGCTGCACCACTAGCCAGTACCACTaGTTTGGTAACAGAGATTGGACTGGTAAAAGCAGACTCCCGGCT +
Preference number: 5 (lower is better)
Translates to: TLFGRTQSCTTSQYH*FGNRDWTGKSRLPA
Trigger: AGCCGGGAGTCTGCTTTTACCAGTCCAATCTCTGTTACCAAACCAGTGGTACTGGCTAGTGGTGCAGCTCTGAGTTCTCCCAAAGAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000479235.5
CDS CCA 90 bp GACACCAACCGAACTCTGTGGGCAGATTCTGCTGCCTGGGAGCCCTaGAATAGAACTTCAAGGACCGTTCAACATCTGGATTCAACTAGA +
Preference number: 5 (lower is better)
Translates to: DTNRTLWADSAAWEP*NRTSRTVQHLDSTR
Trigger: TCTAGTTGAATCCAGATGTTGAACGGTCCTTGAAGTTCTATTCCAGGGCTCCCAGGCAGCAGAATCTGCCCACAGAGTTCGGTTGGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493083.5
CDS TCA 90 bp GATTGGACTGGTAAAAGCAGACTCCCGGCTAGAGGAAAGGGATCCTaGCTTGTGCTCCATCCTGTTAGCTTTCCATGCATTAGGCTTGGA +
Preference number: 5 (lower is better)
Translates to: DWTGKSRLPARGKGS*LVLHPVSFPCIRLG
Trigger: TCCAAGCCTAATGCATGGAAAGCTAACAGGATGGAGCACAAGTCAGGATCCCTTTCCTCTAGCCGGGAGTCTGCTTTTACCAGTCCAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS TCA 90 bp GATTGGACTGGTAAAAGCAGACTCCCGGCTAGAGGAAAGGGATCCTaGCTTGTGCTCCATCCTGTTAGCTTTCCATGCATTAGGCTACAC +
Preference number: 5 (lower is better)
Translates to: DWTGKSRLPARGKGS*LVLHPVSFPCIRLH
Trigger: GTGTAGCCTAATGCATGGAAAGCTAACAGGATGGAGCACAAGTCAGGATCCCTTTCCTCTAGCCGGGAGTCTGCTTTTACCAGTCCAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479235.5
CDS CCA 90 bp CTATCACTCCGAACTCTGTGGGCAGATTCTGCTGCCTGGGAGCCCTaGAATAGAACTTCAAGGACCGTTCAACATCTGGATTCAACTAGA +
Preference number: 5 (lower is better)
Translates to: LSLRTLWADSAAWEP*NRTSRTVQHLDSTR
Trigger: TCTAGTTGAATCCAGATGTTGAACGGTCCTTGAAGTTCTATTCCAGGGCTCCCAGGCAGCAGAATCTGCCCACAGAGTTCGGAGTGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460859.1
CDS CCA 90 bp GAGTGTAACCTCTGTGGTCCTGTTTCTGAACTCGAGTCGGCCAGCTaGATCTCCCACAAGGTTTCCTTGTTAAAAGGGTGCTTAAGTAAC +
Preference number: 5 (lower is better)
Translates to: ECNLCGPVSELESAS*ISHKVSLLKGCLSN
Trigger: GTTACTTAAGCACCCTTTTAACAAGGAAACCTTGTGGGAGATCCAGCTGGCCGACTCGAGTTCAGAAACAGGACCACAGAGGTTACACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000495616.1
CDS CCA 90 bp CTGCCTGGGAGCCCTGGAATAGAACTTCAAGGACCGTTCAACATCTaGATTCAACTAGAAATTAAGAATGGCCCCCAAACAGAAAGCCGG +
Preference number: 5 (lower is better)
Translates to: LPGSPGIELQGPFNI*IQLEIKNGPQTESR
Trigger: CCGGCTTTCTGTTTGGGGGCCATTCTTAATTTCTAGTTGAATCCAGATGTTGAACGGTCCTTGAAGTTCTATTCCAGGGCTCCCAGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460859.1
ENST00000493083.5
CDS TCA 90 bp CAGAATGAAACACTTAGAACAGAGGACCTCCAGGACAAAGGGGCCTaGGTGAAATGGATTCCCTTCCTGGTTGCTTTCTTGATTGATGGG +
Preference number: 5 (lower is better)
Translates to: QNETLRTEDLQDKGA*VKWIPFLVAFLIDG
Trigger: CCCATCAATCAAGAAAGCAACCAGGAAGGGAATCCATTTCACTCAGGCCCCTTTGTCCTGGAGGTCCTCTGTTCTAAGTGTTTCATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479235.5
CDS TCA 90 bp TGTCACTCTGGCCATAACCCCAAGTATGATAGAAAGCTGGAATACTaGGTTACCACACTGTCCAAGGAGACCAAGGAAGATGTGGCAAGC +
Preference number: 5 (lower is better)
Translates to: CHSGHNPKYDRKLEY*VTTLSKETKEDVAS
Trigger: GCTTGCCACATCTTCCTTGGTCTCCTTGGACAGTGTGGTAACTCAGTATTCCAGCTTTCTATCATACTTGGGGTTATGGCCAGAGTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479235.5
CDS CCA 90 bp GCCCATTCTGTCACTCTGGCCATAACCCCAAGTATGATAGAAAGCTaGAATACTGAGTTACCACACTGTCCAAGGAGACCAAGGAAGATG +
Preference number: 5 (lower is better)
Translates to: AHSVTLAITPSMIES*NTELPHCPRRPRKM
Trigger: CATCTTCCTTGGTCTCCTTGGACAGTGTGGTAACTCAGTATTCCAGCTTTCTATCATACTTGGGGTTATGGCCAGAGTGACAGAATGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479235.5
CDS-3UTR CAA 90 bp CAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAGTTCGGCGGGTCAACTaGGTCAGACGAGAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: QSTLNIKAARITQHFLYPVRRVN*VRREEL
Trigger: CAGCTCCTCTCGTCTGACCAAGTTGACCCGCCGAAC...TGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS TCA 90 bp GCTGTTGTCCTCCAAATCTTCCAGCTTGTCACAGTCTCTATTCTCTaGGAAGTCTCCATTCCGGTCATCCTTCAGAGTTTTCAGGAACTC +
Preference number: 5 (lower is better)
Translates to: AVVLQIFQLVTVSIL*EVSIPVILQSFQEL
Trigger: GAGTTCCTGAAAACTCTGAAGGATGACCGGAATGGAGACTTCTCAGAGAATAGAGACTGTGACAAGCTGGAAGATTTGGAGGACAACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000468724.1
ENST00000479235.5
CDS CCA 90 bp TCTGATGGCAAAAGGCTAGTTCCAGGCCAGGGTGGCTATTGTAAATaGTTGAACAATCCTGATTTATTTAGTCTGGAGGCCCGTCTACTC +
Preference number: 5 (lower is better)
Translates to: SDGKRLVPGQGGYCK*LNNPDLFSLEARLL
Trigger: GAGTAGACGGGCCTCCAGACTAAATAAATCAGGATTGTTCAACCATTTACAATAGCCACCCTGGCCTGGAACTAGCCTTTTGCCATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479235.5
CDS-3UTR CAA 90 bp ATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAAGTTCGGCGGGTCAACTaGGTCAGACGAGAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: IHPEYQGCKNNTTFPISKVRRVN*VRREEL
Trigger: CAGCTCCTCTCGTCTGACCAAGTTGACCCGCCGAAC...TTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS CCA 90 bp GTTACCACACTGTCCAAGGAGACCAAGGAAGATGTGGCAAGCCAGTaGAGTGGTGCTGAAGCAAATGAAAAACTTCCAACTTATTTTTCC +
Preference number: 5 (lower is better)
Translates to: VTTLSKETKEDVASQ*SGAEANEKLPTYFS
Trigger: GGAAAAATAAGTTGGAAGTTTTTCATTTGCTTCAGCACCACTCCACTGGCTTGCCACATCTTCCTTGGTCTCCTTGGACAGTGTGGTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000479235.5
CDS-3UTR CAA 90 bp ATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAAGCCACCTCCACTACGTaGGCTCATGCCATCATGACC +
Preference number: 5 (lower is better)
Translates to: IHPEYQGCKNNTTFPISKATSTT*AHAIMT
Trigger: GGTCATGATGGCATGAGCCAACGTAGTGGAGGTGGC...TTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CAA 90 bp CAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCACTGGAGGGACTCTCTTaGGGAGAACTCAGAGCTGCA +
Preference number: 5 (lower is better)
Translates to: QSTLNIKAARITQHFLYPLEGLS*GELRAA
Trigger: TGCAGCTCTGAGTTCTCCCAAAGAGAGTCCCTCCAG...TGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CAA 90 bp ATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAAATCTTGGAGGGTTGCTaGGCACTAGGCGGGTTTTCC +
Preference number: 5 (lower is better)
Translates to: IHPEYQGCKNNTTFPISKILEGC*ALGGFS
Trigger: GGAAAACCCGCCTAGTGCCAAGCAACCCTCCAAGAT...TTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CAA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATATCTTGGAGGGTTGCTaGGCACTAGGCGGGTTTTCC +
Preference number: 5 (lower is better)
Translates to: STLNIKAARITQHFLYPNILEGC*ALGGFS
Trigger: GGAAAACCCGCCTAGTGCCAAGCAACCCTCCAAGAT...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CAA 90 bp ACAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCTTCCATGCATTAGGCTaGGAAGGAGGTGGTACAGGC +
Preference number: 5 (lower is better)
Translates to: TIHPEYQGCKNNTTFPISFHALG*EGGGTG
Trigger: GCCTGTACCACCTCCTTCCAAGCCTAATGCATGGAA...GGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CAA 90 bp CAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCATTCCATGCATTAGGCTaGGAAGGAGGTGGTACAGGC +
Preference number: 5 (lower is better)
Translates to: QSTLNIKAARITQHFLYPFHALG*EGGGTG
Trigger: GCCTGTACCACCTCCTTCCAAGCCTAATGCATGGAA...TGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CAA 90 bp ACAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCGGTTCAGGTGTGCTGTaGTCCTCCAAATCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: TIHPEYQGCKNNTTFPISGSGVL*SSKSSS
Trigger: GCTGGAAGATTTGGAGGACAACAGCACACCTGAACC...GGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CAA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATGAGGGCAAGACCATTTaGATGACAGCCTTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: STLNIKAARITQHFLYPNEGKTI*MTAFLP
Trigger: GGGGAGGAAGGCTGTCATCAAAATGGTCTTGCCCTC...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CAA 90 bp ATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAAGAGGGCAAGACCATTTaGATGACAGCCTTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: IHPEYQGCKNNTTFPISKEGKTI*MTAFLP
Trigger: GGGGAGGAAGGCTGTCATCAAAATGGTCTTGCCCTC...TTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CAA 90 bp CAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAGAAAGGGATCCTGACTaGTGCTCCATCCTGTTAGCT +
Preference number: 5 (lower is better)
Translates to: QSTLNIKAARITQHFLYPERDPD*CSILLA
Trigger: AGCTAACAGGATGGAGCACAAGTCAGGATCCCTTTC...TGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CAA 90 bp ACAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCGCCAGTACCACTGGTTaGGTAACAGAGATTGGACTG +
Preference number: 5 (lower is better)
Translates to: TIHPEYQGCKNNTTFPISASTTG*VTEIGL
Trigger: CAGTCCAATCTCTGTTACCAAACCAGTGGTACTGGC...GGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CAA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATGGTTCAGGTGTGCTGTaGTCCTCCAAATCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: STLNIKAARITQHFLYPNGSGVL*SSKSSS
Trigger: GCTGGAAGATTTGGAGGACAACAGCACACCTGAACC...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS CCA 90 bp ATGCAACCTCTTTCGGAGGTTAGGCACTTCAAGGAAAATGGTAGATaGGATACAGAAGAGCCATTGGACATTAATAGTGACTTCCCAAAA +
Preference number: 5 (lower is better)
Translates to: MQPLSEVRHFKENGR*DTEEPLDINSDFPK
Trigger: TTTTGGGAAGTCACTATTAATGTCCAATGGCTCTTCTGTATCCCATCTACCATTTTCCTTGAAGTGCCTAACCTCCGAAAGAGGTTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479235.5
CDS-3UTR CAA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATGAAAGGGATCCTGACTaGTGCTCCATCCTGTTAGCT +
Preference number: 5 (lower is better)
Translates to: STLNIKAARITQHFLYPNERDPD*CSILLA
Trigger: AGCTAACAGGATGGAGCACAAGTCAGGATCCCTTTC...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CAA 90 bp ATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAAGCCAGTACCACTGGTTaGGTAACAGAGATTGGACTG +
Preference number: 5 (lower is better)
Translates to: IHPEYQGCKNNTTFPISKASTTG*VTEIGL
Trigger: CAGTCCAATCTCTGTTACCAAACCAGTGGTACTGGC...TTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CAA 90 bp CAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCATTGATAACTAGCATCTaGGAGGGTTGCTTGGCACTA +
Preference number: 5 (lower is better)
Translates to: QSTLNIKAARITQHFLYPLITSI*EGCLAL
Trigger: TAGTGCCAAGCAACCCTCCAAGATGCTAGTTATCAA...TGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CAA 90 bp ATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATTCATGTGGAACTCTTaGAGCTCATCCTCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: IHPEYQGCKNNTTFPISKFMWNS*SSSSVR
Trigger: CCTCACAGAGGATGAGCTCAAAGAGTTCCACATGAA...TTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CAA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATTTCATGTGGAACTCTTaGAGCTCATCCTCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: STLNIKAARITQHFLYPNFMWNS*SSSSVR
Trigger: CCTCACAGAGGATGAGCTCAAAGAGTTCCACATGAA...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS TCA 90 bp GACACAGTTGGTTTAAGGTTCCTTTGTAGTAATATAAGCAACCTATaGAATCAAGGACTCACGACCCAGGAAGTGTTTTCCAAAAGACAG +
Preference number: 5 (lower is better)
Translates to: DTVGLRFLCSNISNL*NQGLTTQEVFSKRQ
Trigger: CTGTCTTTTGGAAAACACTTCCTGGGTCGTGAGTCCTTGATTTCATAGGTTGCTTATATTACTACAAAGGAACCTTAAACCAACTGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487436.1
CDS CCA 90 bp TTAGGCACTTCAAGGAAAATGGTAGATGGGATACAGAAGAGCCATTaGACATTAATAGTGACTTCCCAAAAACAGGGCTCTAGTTCAATA +
Preference number: 5 (lower is better)
Translates to: LGTSRKMVDGIQKSH*TLIVTSQKQGSSSI
Trigger: TATTGAACTAGAGCCCTGTTTTTGGGAAGTCACTATTAATGTCCAATGGCTCTTCTGTATCCCATCTACCATTTTCCTTGAAGTGCCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479235.5
CDS-3UTR CAA 90 bp ACAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCCCACTTCACAATCATTaGAAAGGCCACACGAATCTA +
Preference number: 5 (lower is better)
Translates to: TIHPEYQGCKNNTTFPISPLHNH*KGHTNL
Trigger: TAGATTCGTGTGGCCTTTCAAATGATTGTGAAGTGG...GGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CAA 90 bp CAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCATCCCACAAGGTTTCCTaGTTAAAAGGGTGCTTAAGT +
Preference number: 5 (lower is better)
Translates to: QSTLNIKAARITQHFLYPSHKVS*LKGCLS
Trigger: ACTTAAGCACCCTTTTAACAAGGAAACCTTGTGGGA...TGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CAA 90 bp ATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATTGATAACTAGCATCTaGGAGGGTTGCTTGGCACTA +
Preference number: 5 (lower is better)
Translates to: IHPEYQGCKNNTTFPISKLITSI*EGCLAL
Trigger: TAGTGCCAAGCAACCCTCCAAGATGCTAGTTATCAA...TTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CAA 90 bp ACAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCGGTTCTTATAGACACTaGGAACCACGGATGACAATT +
Preference number: 5 (lower is better)
Translates to: TIHPEYQGCKNNTTFPISGSYRH*EPRMTI
Trigger: AATTGTCATCCGTGGTTCCAAGTGTCTATAAGAACC...GGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CAA 90 bp CAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCATCCAAATCTTCCAGCTaGTCACAGTCTCTATTCTCT +
Preference number: 5 (lower is better)
Translates to: QSTLNIKAARITQHFLYPSKSSS*SQSLFS
Trigger: AGAGAATAGAGACTGTGACAAGCTGGAAGATTTGGA...TGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CAA 90 bp ACAATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCTTTTCTGTGTTTCACTaGTTCTGCTCCTTCCCAAAA +
Preference number: 5 (lower is better)
Translates to: TIHPEYQGCKNNTTFPISFSVFH*FCSFPK
Trigger: TTTTGGGAAGGAGCAGAACAAGTGAAACACAGAAAA...GGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CAA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATGTAAGACATGGATATTaGCACCGAGTGCAAATACTG +
Preference number: 5 (lower is better)
Translates to: STLNIKAARITQHFLYPNVRHGY*HRVQIL
Trigger: CAGTATTTGCACTCGGTGCAAATATCCATGTCTTAC...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CAA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATTCCCACAAGGTTTCCTaGTTAAAAGGGTGCTTAAGT +
Preference number: 5 (lower is better)
Translates to: STLNIKAARITQHFLYPNSHKVS*LKGCLS
Trigger: ACTTAAGCACCCTTTTAACAAGGAAACCTTGTGGGA...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CAA 90 bp ATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAAGGTTCTTATAGACACTaGGAACCACGGATGACAATT +
Preference number: 5 (lower is better)
Translates to: IHPEYQGCKNNTTFPISKGSYRH*EPRMTI
Trigger: AATTGTCATCCGTGGTTCCAAGTGTCTATAAGAACC...TTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CAA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATTCCAAATCTTCCAGCTaGTCACAGTCTCTATTCTCT +
Preference number: 5 (lower is better)
Translates to: STLNIKAARITQHFLYPNSKSSS*SQSLFS
Trigger: AGAGAATAGAGACTGTGACAAGCTGGAAGATTTGGA...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CAA 90 bp TCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATCGAATCTATCACTCTTaGTTTTCACCCAGCATAAGG +
Preference number: 5 (lower is better)
Translates to: STLNIKAARITQHFLYPNRIYHS*FSPSIR
Trigger: CCTTATGCTGGGTGAAAACAAAGAGTGATAGATTCG...ATTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355105.8
CDS-3UTR CAA 90 bp ATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAATTTTCTGTGTTTCACTaGTTCTGCTCCTTCCCAAAA +
Preference number: 5 (lower is better)
Translates to: IHPEYQGCKNNTTFPISKFSVFH*FCSFPK
Trigger: TTTTGGGAAGGAGCAGAACAAGTGAAACACAGAAAA...TTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CAA 90 bp ATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAAAAAATAGACAGGAATTaGCTACACTTTTCCCTCCAC +
Preference number: 5 (lower is better)
Translates to: IHPEYQGCKNNTTFPISKKIDRN*LHFSLH
Trigger: GTGGAGGGAAAAGTGTAGCAAATTCCTGTCTATTTT...TTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGAT
38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS-3UTR CAA 90 bp ATCCACCCTGAATATCAAGGCTGCAAGAATAACACAACATTTCCTATATCCAAACTCATCTTAAACTATTaGGTTCCTGACACGTTTCCA +
Preference number: 5 (lower is better)
Translates to: IHPEYQGCKNNTTFPISKLILNY*VPDTFP
Trigger: TGGAAACGTGTCAGGAACCAAATAGTTTAAGATGAG...TTTGGATATAGGAAATGTTGTGTTATTCTTGCAGCCTTGATATTCAGGGTGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS TCA 90 bp TTCTGCTCCTTCCCAAAATCTAAATTGAGCCACTGGAAGGAGATATaGAGAATCTTCTATGCTTTGGTAGAGAAGTCACTTATTATTTTG +
Preference number: 5 (lower is better)
Translates to: FCSFPKSKLSHWKEI*RIFYALVEKSLIIL
Trigger: CAAAATAATAAGTGACTTCTCTACCAAAGCATAGAAGATTCTTCATATCTCCTTCCAGTGGCTCAATTTAGATTTTGGGAAGGAGCAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000460859.1
ENST00000480083.5
ENST00000480941.1
ENST00000488278.5
ENST00000493083.5
CDS CCA 72 bp TGCCCGGCCCACAAGGTCCAGGAGGGGCAGAGCGGGTaGAGGAGGAGGAGCGACCAGCAGCACGGCCCTCCC +
Preference number: 6 (lower is better)
Translates to: CPAHKVQEGQSG*RRRSDQQHGPP
Trigger: GGGAGGGCCGTGCTGCTGGTCGCTCCTCCTCCTCCACCCGCTCTGCCCCTCCTGGACCTTGTGGGCCGGGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480083.5
CDS CAA 90 bp CGGCCCTTTCCCACCTTCCGCTCCTTACTTCTCGTGTGCGCGTCGTaGAGACTCCAGTCCCCAGCGGGCCACACGGCCTGGCCCCGGAGG +
Preference number: 6 (lower is better)
Translates to: RPFPTFRSLLLVCAS*RLQSPAGHTAWPRR
Trigger: CCTCCGGGGCCAGGCCGTGTGGCCCGCTGGGGACTGGAGTCTCAACGACGCGCACACGAGAAGTAAGGAGCGGAAGGTGGGAAAGGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480941.1
ENST00000488278.5
CDS TCA 72 bp GCGGCGGAGCTATGGCCAGGGACTAGACGCTGCGTCTaGGGACGCGTCCCCAGCTTGTCGACCCGGCAGAGG +
Preference number: 6 (lower is better)
Translates to: AAELWPGTRRCV*GRVPSLSTRQR
Trigger: CCTCTGCCGGGTCGACAAGCTGGGGACGCGTCCTCAGACGCAGCGTCTAGTCCCTGGCCATAGCTCCGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000480083.5
CDS TCA 72 bp CCACCTTCCGCTCCTTACTTCTCGTGTGCGCGTCGTTaGGACTCCAGTCCCCAGCGGGCCACACGGCCTGGC +
Preference number: 6 (lower is better)
Translates to: PPSAPYFSCARR*DSSPQRATRPG
Trigger: GCCAGGCCGTGTGGCCCGCTGGGGACTGGAGTCTCAACGACGCGCACACGAGAAGTAAGGAGCGGAAGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480941.1
ENST00000488278.5
CDS CAA 72 bp CCCACCTTCCGCTCCTTACTTCTCGTGTGCGCGTCGTaGAGACTCCAGTCCCCAGCGGGCCACACGGCCTGG +
Preference number: 6 (lower is better)
Translates to: PTFRSLLLVCAS*RLQSPAGHTAW
Trigger: CCAGGCCGTGTGGCCCGCTGGGGACTGGAGTCTCAACGACGCGCACACGAGAAGTAAGGAGCGGAAGGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480941.1
ENST00000488278.5
CDS GCA 72 bp CGGCCCTTTCCCACCTTCCGCTCCTTACTTCTCGTGTaGGCGTCGTTGAGACTCCAGTCCCCAGCGGGCCAC +
Preference number: 6 (lower is better)
Translates to: RPFPTFRSLLLV*ASLRLQSPAGH
Trigger: GTGGCCCGCTGGGGACTGGAGTCTCAACGACGCGCACACGAGAAGTAAGGAGCGGAAGGTGGGAAAGGGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480941.1
ENST00000488278.5
CDS CCA 72 bp GCACACCCTTTCCGGGAGTGGAAGCTGCCATTCCAATaGCGATGGTTCCCTGTGCCACCTCCACTACGTTGG +
Preference number: 6 (lower is better)
Translates to: AHPFREWKLPFQ*RWFPVPPPLRW
Trigger: CCAACGTAGTGGAGGTGGCACAGGGAACCATCGCCATTGGAATGGCAGCTTCCACTCCCGGAAAGGGTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000496278.1
ENST00000498128.1
CDS CCA 72 bp CCTTTCCGGGAGTGGAAGCTGCCATTCCAATGGCGATaGTTCCCTGTGCCACCTCCACTACGTTGGCTCATG +
Preference number: 6 (lower is better)
Translates to: PFREWKLPFQWR*FPVPPPLRWLM
Trigger: CATGAGCCAACGTAGTGGAGGTGGCACAGGGAACCATCGCCATTGGAATGGCAGCTTCCACTCCCGGAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000496278.1
ENST00000498128.1
CDS CAA 90 bp GCTGCCATTCCAATGGCGATGGTTCCCTGTGCCACCTCCACTACGTaGGCTCATGCCATCATGACCTCGGGAAGAGCTATGCCAACCAGA +
Preference number: 6 (lower is better)
Translates to: AAIPMAMVPCATSTT*AHAIMTSGRAMPTR
Trigger: TCTGGTTGGCATAGCTCTTCCCGAGGTCATGATGGCATGAGCCAACGTAGTGGAGGTGGCACAGGGAACCATCGCCATTGGAATGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000496278.1
ENST00000498128.1
CDS TCA 72 bp CCTGTGCCACCTCCACTACGTTGGCTCATGCCATCATaGCCTCGGGAAGAGCTATGCCAACCAGATGGGTTC +
Preference number: 6 (lower is better)
Translates to: PVPPPLRWLMPS*PREELCQPDGF
Trigger: GAACCCATCTGGTTGGCATAGCTCTTCCCGAGGTCATGATGGCATGAGCCAACGTAGTGGAGGTGGCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000496278.1
ENST00000498128.1
CDS TCA 72 bp TGCCTGAGCCCAGGAGGCCAAAGCTGCAGTAAGCTGTaGTCACACTACCGCACTTCATCCTGGGTGACAGAG +
Preference number: 6 (lower is better)
Translates to: CLSPGGQSCSKL*SHYRTSSWVTE
Trigger: CTCTGTCACCCAGGATGAAGTGCGGTAGTGTGATCACAGCTTACTGCAGCTTTGGCCTCCTGGGCTCAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495616.1
CDS GCA 72 bp GATGGTTCCCTGTGCCACCTCCACTACGTTGGCTCATaGCATCATGACCTCGGGAAGAGCTATGCCAACCAG +
Preference number: 6 (lower is better)
Translates to: DGSLCHLHYVGS*HHDLGKSYANQ
Trigger: CTGGTTGGCATAGCTCTTCCCGAGGTCATGATGGCATGAGCCAACGTAGTGGAGGTGGCACAGGGAACCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000496278.1
ENST00000498128.1
CDS CAA 72 bp CCAATGGCGATGGTTCCCTGTGCCACCTCCACTACGTaGGCTCATGCCATCATGACCTCGGGAAGAGCTATG +
Preference number: 6 (lower is better)
Translates to: PMAMVPCATSTT*AHAIMTSGRAM
Trigger: CATAGCTCTTCCCGAGGTCATGATGGCATGAGCCAACGTAGTGGAGGTGGCACAGGGAACCATCGCCATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000496278.1
ENST00000498128.1
CDS CAA 90 bp GTTTTCAGGAACTCACTCTTCCTGTCGGTGGTTCGGCGGGTCAACTaGGTCAGACGAGAGGAGCTGATCTCAATTGGAGGGGTGGTGCTG +
Preference number: 6 (lower is better)
Translates to: VFRNSLFLSVVRRVN*VRREELISIGGVVL
Trigger: CAGCACCACCCCTCCAATTGAGATCAGCTCCTCTCGTCTGACCAAGTTGACCCGCCGAACCACCGACAGGAAGAGTGAGTTCCTGAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000468724.1
ENST00000479235.5
CDS GCA 72 bp AGTGGAAGCTGCCATTCCAATGGCGATGGTTCCCTGTaGCACCTCCACTACGTTGGCTCATGCCATCATGAC +
Preference number: 6 (lower is better)
Translates to: SGSCHSNGDGSL*HLHYVGSCHHD
Trigger: GTCATGATGGCATGAGCCAACGTAGTGGAGGTGGCACAGGGAACCATCGCCATTGGAATGGCAGCTTCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000496278.1
ENST00000498128.1
CDS GCA 72 bp TTTCCTGAAAAGCACACCCTTTCCGGGAGTGGAAGCTaGCATTCCAATGGCGATGGTTCCCTGTGCCACCTC +
Preference number: 6 (lower is better)
Translates to: FPEKHTLSGSGS*HSNGDGSLCHL
Trigger: GAGGTGGCACAGGGAACCATCGCCATTGGAATGGCAGCTTCCACTCCCGGAAAGGGTGTGCTTTTCAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000496278.1
ENST00000498128.1
CDS CCA 72 bp GTCGACGGCGGCTTACTCCAAATCTACCTTCTCCTCTaGGTAGGTGCTCTCCGTGTTTTTCGAAGGTGGCAG +
Preference number: 6 (lower is better)
Translates to: VDGGLLQIYLLL*VGALRVFRRWQ
Trigger: CTGCCACCTTCGAAAAACACGGAGAGCACCTACCCAGAGGAGAAGGTAGATTTGGAGTAAGCCGCCGTCGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000496278.1
CDS CAA 72 bp AACTCACTCTTCCTGTCGGTGGTTCGGCGGGTCAACTaGGTCAGACGAGAGGAGCTGATCTCAATTGGAGGG +
Preference number: 6 (lower is better)
Translates to: NSLFLSVVRRVN*VRREELISIGG
Trigger: CCCTCCAATTGAGATCAGCTCCTCTCGTCTGACCAAGTTGACCCGCCGAACCACCGACAGGAAGAGTGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000468724.1
ENST00000479235.5
CDS CCA 72 bp TATGCTCCCTTAGAGACACCAGAGTCCACAGAATCATaGCGGAACAGGGAGGGCTGGTGCCAAGAATCTCCT +
Preference number: 6 (lower is better)
Translates to: YAPLETPESTES*RNREGWCQESP
Trigger: AGGAGATTCTTGGCACCAGCCCTCCCTGTTCCGCCATGATTCTGTGGACTCTGGTGTCTCTAAGGGAGCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000496278.1
ENST00000498128.1
CDS GCA 72 bp CGGCTTACTCCAAATCTACCTTCTCCTCTGGGTAGGTaGTCTCCGTGTTTTTCGAAGGTGGCAGTAGGTGAC +
Preference number: 6 (lower is better)
Translates to: RLTPNLPSPLGR*SPCFSKVAVGD
Trigger: GTCACCTACTGCCACCTTCGAAAAACACGGAGAGCACCTACCCAGAGGAGAAGGTAGATTTGGAGTAAGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000496278.1
CDS GCA 72 bp GCAGACTCCCGGCTAGAGGAAAGGGATCCTGACTTGTaGTCCATCCTGTTAGCTTTCCATGCATTAGGCTTG +
Preference number: 6 (lower is better)
Translates to: ADSRLEERDPDL*SILLAFHALGL
Trigger: CAAGCCTAATGCATGGAAAGCTAACAGGATGGAGCACAAGTCAGGATCCCTTTCCTCTAGCCGGGAGTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS GCA 72 bp TTTCGGTGTCTGAGTCCTCAAACTCTGCTTTGCAAGTaGTTCTCCAAGGGGAGAACAGACTGGAACTGCGGC +
Preference number: 6 (lower is better)
Translates to: FRCLSPQTLLCK*FSKGRTDWNCG
Trigger: GCCGCAGTTCCAGTCTGTTCTCCCCTTGGAGAAGCACTTGCAAAGCAGAGTTTGAGGACTCAGACACCGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000467032.1
ENST00000479235.5
ENST00000487436.1
CDS GCA 72 bp GCAGACTCCCGGCTAGAGGAAAGGGATCCTGACTTGTaGTCCATCCTGTTAGCTTTCCATGCATTAGGCTAC +
Preference number: 6 (lower is better)
Translates to: ADSRLEERDPDL*SILLAFHALGY
Trigger: GTAGCCTAATGCATGGAAAGCTAACAGGATGGAGCACAAGTCAGGATCCCTTTCCTCTAGCCGGGAGTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479235.5
CDS CCA 72 bp CTCTGTGGTCCTGTTTCTGAACTCGAGTCGGCCAGCTaGATCTCCCACAAGGTTTCCTTGTTAAAAGGGTGC +
Preference number: 6 (lower is better)
Translates to: LCGPVSELESAS*ISHKVSLLKGC
Trigger: GCACCCTTTTAACAAGGAAACCTTGTGGGAGATCCAGCTGGCCGACTCGAGTTCAGAAACAGGACCACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000495616.1
CDS CCA 72 bp GCCATCATGACCTCGGGAAGAGCTATGCCAACCAGATaGGTTCCCTGTGATTCCAGCATATGCTCCCTTAGA +
Preference number: 6 (lower is better)
Translates to: AIMTSGRAMPTR*VPCDSSICSLR
Trigger: TCTAAGGGAGCATATGCTGGAATCACAGGGAACCCATCTGGTTGGCATAGCTCTTCCCGAGGTCATGATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000496278.1
ENST00000498128.1
CDS CCA 72 bp CGAACTCTGTGGGCAGATTCTGCTGCCTGGGAGCCCTaGAATAGAACTTCAAGGACCGTTCAACATCTGGAT +
Preference number: 6 (lower is better)
Translates to: RTLWADSAAWEP*NRTSRTVQHLD
Trigger: ATCCAGATGTTGAACGGTCCTTGAAGTTCTATTCCAGGGCTCCCAGGCAGCAGAATCTGCCCACAGAGTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460859.1
ENST00000493083.5
CDS CAA 90 bp GTTTCTGAACTCGAGTCGGCCAGCTGGATCTCCCACAAGGTTTCCTaGTTAAAAGGGTGCTTAAGTAACCTGGCCGGCAGCACGACTTAT +
Preference number: 6 (lower is better)
Translates to: VSELESASWISHKVS*LKGCLSNLAGSTTY
Trigger: ATAAGTCGTGCTGCCGGCCAGGTTACTTAAGCACCCTTTTAACAAGGAAACCTTGTGGGAGATCCAGCTGGCCGACTCGAGTTCAGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000495616.1
CDS CAA 90 bp TCTTTGGGAGAACTCAGAGCTGCACCACTAGCCAGTACCACTGGTTaGGTAACAGAGATTGGACTGGTAAAAGCAGACTCCCGGCTAGAG +
Preference number: 6 (lower is better)
Translates to: SLGELRAAPLASTTG*VTEIGLVKADSRLE
Trigger: CTCTAGCCGGGAGTCTGCTTTTACCAGTCCAATCTCTGTTACCAAACCAGTGGTACTGGCTAGTGGTGCAGCTCTGAGTTCTCCCAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000479235.5
CDS TCA 72 bp CATACTCCAGAAGGTGTCCCAATAGGTCTGCATGGCTaGTGCTGTTTGCCAGCTTCTGGATTCAAGGAAGGA +
Preference number: 6 (lower is better)
Translates to: HTPEGVPIGLHG*CCLPASGFKEG
Trigger: TCCTTCCTTGAATCCAGAAGCTGGCAAACAGCATCAGCCATGCAGACCTATTGGGACACCTTCTGGAGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000498128.1
CDS TCA 72 bp GGAACCACGGATGACAATTTGTTCCCATTTGCATGGTaGGATCCTGGTGAGGTGAATGCAGCAGAGAAGGCA +
Preference number: 6 (lower is better)
Translates to: GTTDDNLFPFAW*DPGEVNAAEKA
Trigger: TGCCTTCTCTGCTGCATTCACCTCACCAGGATCTCACCATGCAAATGGGAACAAATTGTCATCCGTGGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS TCA 72 bp GGTAAAAGCAGACTCCCGGCTAGAGGAAAGGGATCCTaGCTTGTGCTCCATCCTGTTAGCTTTCCATGCATT +
Preference number: 6 (lower is better)
Translates to: GKSRLPARGKGS*LVLHPVSFPCI
Trigger: AATGCATGGAAAGCTAACAGGATGGAGCACAAGTCAGGATCCCTTTCCTCTAGCCGGGAGTCTGCTTTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000479235.5
CDS TCA 72 bp AGGGACTCTGGGCAAATACCACAAACAGGTTGCTCCTaGCAGCAAAGAGCAAGAACTGGGGTTCTCTTCTAC +
Preference number: 6 (lower is better)
Translates to: RDSGQIPQTGCS*QQRARTGVLFY
Trigger: GTAGAAGAGAACCCCAGTTCTTGCTCTTTGCTGTCAGGAGCAACCTGTTTGTGGTATTTGCCCAGAGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468724.1
CDS TCA 72 bp ACACTTAGAACAGAGGACCTCCAGGACAAAGGGGCCTaGGTGAAATGGATTCCCTTCCTGGTTGCTTTCTTG +
Preference number: 6 (lower is better)
Translates to: TLRTEDLQDKGA*VKWIPFLVAFL
Trigger: CAAGAAAGCAACCAGGAAGGGAATCCATTTCACTCAGGCCCCTTTGTCCTGGAGGTCCTCTGTTCTAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479235.5
CDS GCA 72 bp ATGCCAACCAGATGGGTTCCCTGTGATTCCAGCATATaGTCCCTTAGAGACACCAGAGTCCACAGAATCATG +
Preference number: 6 (lower is better)
Translates to: MPTRWVPCDSSI*SLRDTRVHRIM
Trigger: CATGATTCTGTGGACTCTGGTGTCTCTAAGGGAGCATATGCTGGAATCACAGGGAACCCATCTGGTTGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000496278.1
ENST00000498128.1
CDS GCA 72 bp GACAGCCTTCCTCCCCATTTTCCTTTGGTTCAGGTGTaGTGTTGTCCTCCAAATCTTCCAGCTTGTCACAGT +
Preference number: 6 (lower is better)
Translates to: DSLPPHFPLVQV*CCPPNLPACHS
Trigger: ACTGTGACAAGCTGGAAGATTTGGAGGACAACAGCACACCTGAACCAAAGGAAAATGGGGAGGAAGGCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000468724.1
ENST00000479235.5
CDS CCA 72 bp ACCACTAGCCAGTACCACTGGTTTGGTAACAGAGATTaGACTGGTAAAAGCAGACTCCCGGCTAGAGGAAAG +
Preference number: 6 (lower is better)
Translates to: TTSQYHWFGNRD*TGKSRLPARGK
Trigger: CTTTCCTCTAGCCGGGAGTCTGCTTTTACCAGTCCAATCTCTGTTACCAAACCAGTGGTACTGGCTAGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000479235.5
CDS CCA 72 bp ACAACAACAACAAAAACAAAAATTAGCAGGGCGTGGTaGTACACAGCCTGTAGGCCCAGCTACTCTGGGAGC +
Preference number: 6 (lower is better)
Translates to: TTTTKTKISRAW*YTACRPSYSGS
Trigger: GCTCCCAGAGTAGCTGGGCCTACAGGCTGTGTACCACCACGCCCTGCTAATTTTTGTTTTTGTTGTTGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000495616.1
CDS CAA 72 bp GAACTCAGAGCTGCACCACTAGCCAGTACCACTGGTTaGGTAACAGAGATTGGACTGGTAAAAGCAGACTCC +
Preference number: 6 (lower is better)
Translates to: ELRAAPLASTTG*VTEIGLVKADS
Trigger: GGAGTCTGCTTTTACCAGTCCAATCTCTGTTACCAAACCAGTGGTACTGGCTAGTGGTGCAGCTCTGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000479235.5
CDS TCA 72 bp AAAGTGCATCACAAAATTGCTGCTTTCCAGGAACTCTaGTGGCAAAAGGCTAGTTCCAGGCCAGGGTGGCTA +
Preference number: 6 (lower is better)
Translates to: KVHHKIAAFQEL*WQKASSRPGWL
Trigger: TAGCCACCCTGGCCTGGAACTAGCCTTTTGCCATCAGAGTTCCTGGAAAGCAGCAATTTTGTGATGCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479235.5
CDS CCA 72 bp CTGTCCAAGGAGACCAAGGAAGATGTGGCAAGCCAGTaGAGTGGTGCTGAAGCAAATGAAAAACTTCCAACT +
Preference number: 6 (lower is better)
Translates to: LSKETKEDVASQ*SGAEANEKLPT
Trigger: AGTTGGAAGTTTTTCATTTGCTTCAGCACCACTCCACTGGCTTGCCACATCTTCCTTGGTCTCCTTGGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479235.5
CDS CAA 90 bp GATGGCAAAAGGCTAGTTCCAGGCCAGGGTGGCTATTGTAAATGGTaGAACAATCCTGATTTATTTAGTCTGGAGGCCCGTCTACTCAAC +
Preference number: 6 (lower is better)
Translates to: DGKRLVPGQGGYCKW*NNPDLFSLEARLLN
Trigger: GTTGAGTAGACGGGCCTCCAGACTAAATAAATCAGGATTGTTCAACCATTTACAATAGCCACCCTGGCCTGGAACTAGCCTTTTGCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479235.5
CDS CAA 72 bp AGGCTAGTTCCAGGCCAGGGTGGCTATTGTAAATGGTaGAACAATCCTGATTTATTTAGTCTGGAGGCCCGT +
Preference number: 6 (lower is better)
Translates to: RLVPGQGGYCKW*NNPDLFSLEAR
Trigger: ACGGGCCTCCAGACTAAATAAATCAGGATTGTTCAACCATTTACAATAGCCACCCTGGCCTGGAACTAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479235.5
CDS TCA 72 bp AGGAACCAGGTTCTTATAGACACTTGGAACCACGGATaGCAATTTGTTCCCATTTGCATGGTGAGATCCTGG +
Preference number: 6 (lower is better)
Translates to: RNQVLIDTWNHG*QFVPICMVRSW
Trigger: CCAGGATCTCACCATGCAAATGGGAACAAATTGTCATCCGTGGTTCCAAGTGTCTATAAGAACCTGGTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS CAA 72 bp GAGAAGGCAGCAGCAGGATCCTCTTTGGAAACTTTTTaGATAACTAGCATCTTGGAGGGTTGCTTGGCACTA +
Preference number: 6 (lower is better)
Translates to: EKAAAGSSLETF*ITSILEGCLAL
Trigger: TAGTGCCAAGCAACCCTCCAAGATGCTAGTTATCAAAAAAGTTTCCAAAGAGGATCCTGCTGCTGCCTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290795.7
ENST00000355105.8
CDS CAA 72 bp ATGGTTGCTTGTGTCAGGTTAACTCTCAAAGATGATTaGTGGCTTCCCCTGAGTTGTAGTCACCAGATGTCC +
Preference number: 6 (lower is better)
Translates to: MVACVRLTLKDD*WLPLSCSHQMS
Trigger: GGACATCTGGTGACTACAACTCAGGGGAAGCCACAAATCATCTTTGAGAGTTAACCTGACACAAGCAACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479235.5
CDS TCA 72 bp CTCCAAATCTTCCAGCTTGTCACAGTCTCTATTCTCTaGGAAGTCTCCATTCCGGTCATCCTTCAGAGTTTT +
Preference number: 6 (lower is better)
Translates to: LQIFQLVTVSIL*EVSIPVILQSF
Trigger: AAAACTCTGAAGGATGACCGGAATGGAGACTTCTCAGAGAATAGAGACTGTGACAAGCTGGAAGATTTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000468724.1
ENST00000479235.5
CDS CCA 72 bp AAAAGGCTAGTTCCAGGCCAGGGTGGCTATTGTAAATaGTTGAACAATCCTGATTTATTTAGTCTGGAGGCC +
Preference number: 6 (lower is better)
Translates to: KRLVPGQGGYCK*LNNPDLFSLEA
Trigger: GGCCTCCAGACTAAATAAATCAGGATTGTTCAACCATTTACAATAGCCACCCTGGCCTGGAACTAGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479235.5
CDS CAA 72 bp AACATAAGTTTCCAGGGCTTACCTGTCTTAACATGTTaGGGAAGTATGCAACCTCTTTCGGAGGTTAGGCAC +
Preference number: 6 (lower is better)
Translates to: NISFQGLPVLTC*GSMQPLSEVRH
Trigger: GTGCCTAACCTCCGAAAGAGGTTGCATACTTCCCAAACATGTTAAGACAGGTAAGCCCTGGAAACTTATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479235.5
CDS CCA 72 bp AGCCCTGGAATAGAACTTCAAGGACCGTTCAACATCTaGATTCAACTAGAAATTAAGAATGGCCCCCAAACA +
Preference number: 6 (lower is better)
Translates to: SPGIELQGPFNI*IQLEIKNGPQT
Trigger: TGTTTGGGGGCCATTCTTAATTTCTAGTTGAATCCAGATGTTGAACGGTCCTTGAAGTTCTATTCCAGGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460859.1
ENST00000493083.5
CDS CAA 90 bp TTACATGAGAACATAAGTTTCCAGGGCTTACCTGTCTTAACATGTTaGGGAAGTATGCAACCTCTTTCGGAGGTTAGGCACTTCAAGGAA +
Preference number: 6 (lower is better)
Translates to: LHENISFQGLPVLTC*GSMQPLSEVRHFKE
Trigger: TTCCTTGAAGTGCCTAACCTCCGAAAGAGGTTGCATACTTCCCAAACATGTTAAGACAGGTAAGCCCTGGAAACTTATGTTCTCATGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479235.5
CDS TCA 72 bp AAAGAGCAAGAACTGGGGTTCTCTTCTACTAAGTGCTaGCTTCAAGAATCTGGTAGCCTATTTATCACTCTG +
Preference number: 6 (lower is better)
Translates to: KEQELGFSSTKC*LQESGSLFITL
Trigger: CAGAGTGATAAATAGGCTACCAGATTCTTGAAGTCAGCACTTAGTAGAAGAGAACCCCAGTTCTTGCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468724.1
CDS TCA 72 bp ATCCTGTTAGCTTTCCATGCATTAGGCTACACAGGGTaGAAGAACAAATCAGTCAGAACAAGCACACAAACA +
Preference number: 6 (lower is better)
Translates to: ILLAFHALGYTG*KNKSVRTSTQT
Trigger: TGTTTGTGTGCTTGTTCTGACTGATTTGTTCTTTCACCCTGTGTAGCCTAATGCATGGAAAGCTAACAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479235.5
CDS CCA 72 bp TCAAGGAAAATGGTAGATGGGATACAGAAGAGCCATTaGACATTAATAGTGACTTCCCAAAAACAGGGCTCT +
Preference number: 6 (lower is better)
Translates to: SRKMVDGIQKSH*TLIVTSQKQGS
Trigger: AGAGCCCTGTTTTTGGGAAGTCACTATTAATGTCCAATGGCTCTTCTGTATCCCATCTACCATTTTCCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479235.5
CDS CAA 72 bp TTCAAGGAAAATGGTAGATGGGATACAGAAGAGCCATaGGACATTAATAGTGACTTCCCAAAAACAGGGCTC +
Preference number: 6 (lower is better)
Translates to: FKENGRWDTEEP*DINSDFPKTGL
Trigger: GAGCCCTGTTTTTGGGAAGTCACTATTAATGTCCAATGGCTCTTCTGTATCCCATCTACCATTTTCCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479235.5
CDS TCA 72 bp TTCCCAAAATCTAAATTGAGCCACTGGAAGGAGATATaGAGAATCTTCTATGCTTTGGTAGAGAAGTCACTT +
Preference number: 6 (lower is better)
Translates to: FPKSKLSHWKEI*RIFYALVEKSL
Trigger: AAGTGACTTCTCTACCAAAGCATAGAAGATTCTTCATATCTCCTTCCAGTGGCTCAATTTAGATTTTGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000290795.7
ENST00000355105.8
ENST00000460859.1
ENST00000480083.5
ENST00000480941.1
ENST00000488278.5
ENST00000493083.5
CDS TCA 72 bp AGTGAAATGGATTCCCTTCCTGGTTGCTTTCTTGATTaGTGGGTATTAAAAGAAGACACAATAATAGCTTTA +
Preference number: 6 (lower is better)
Translates to: SEMDSLPGCFLD*WVLKEDTIIAL
Trigger: TAAAGCTATTATTGTGTCTTCTTTTAATACCCATCAATCAAGAAAGCAACCAGGAAGGGAATCCATTTCACT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479235.5
CDS CAA 72 bp CTCATTACTAACAGGGTCTCATATTTCAGACATTATTaGTTGGCTTCTAACCACACATCTAAAGATTCATAC +
Preference number: 6 (lower is better)
Translates to: LITNRVSYFRHY*LASNHTSKDSY
Trigger: GTATGAATCTTTAGATGTGTGGTTAGAAGCCAACAAATAATGTCTGAAATATGAGACCCTGTTAGTAATGAG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496278.1