RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPBAR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000179921

Ensembl transcript IDs: ENST00000479077.5, ENST00000519574.2, ENST00000521462.1, ENST00000522678.5

Found 260 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCGCTGAGCTGGACGGATaGTCTGGTAGGAGTCAGCAG +
Preference number: 2 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGAELDG*SGRSQQ
Trigger: CTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGC...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCAGCCAGCAGGTGGGCTaGGCAGGCGGCGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGSQQVG*AGGGPR
Trigger: CCTGGGACCGCCGCCTGCGCAGCCCACCTGCTGGCT...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCGAGCGGCAGCCGGCATaGCTGCAGGATGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSERQPA*LQDGVA
Trigger: GGCCACCCCATCCTGCAGGCATGCCGGCTGCCGCTC...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCTCCTGCAGCTGGCGGTaGGCAGTGGCCAGCACGCGG +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSSCSWR*AVASTR
Trigger: CCGCGTGCTGGCCACTGCCCACCGCCAGCTGCAGGA...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCCCCTGCAGGCACCTTTaGGCGGCTGCCCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSPCRHL*AAALQG
Trigger: CCCCTGGAGGGCAGCCGCCCAAAGGTGCCTGCAGGG...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCAGCCAGCAGGTGGGCTaGGCAGGCGGCGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGSQQVG*AGGGPR
Trigger: CCTGGGACCGCCGCCTGCGCAGCCCACCTGCTGGCT...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCGCAGGGCCAGCCGAATaGTCCCAGGGGGCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSAGPAE*SQGAGV
Trigger: CACTCCAGCCCCCTGGGAGCATTCGGCTGGCCCTGC...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCGAGCGGCAGCCGGCATaGCTGCAGGATGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGERQPA*LQDGVA
Trigger: GGCCACCCCATCCTGCAGGCATGCCGGCTGCCGCTC...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCGAAGCAGCCAGCAGGTaGGCTGCGCAGGCGGCGGTC +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGEAASR*AAQAAV
Trigger: GACCGCCGCCTGCGCAGCCCACCTGCTGGCTGCTTC...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCGCACCAGGGGTCCAGTaGTTCCACCCCAGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSAPGVQ*FHPRAG
Trigger: GCCCGCTCTGGGGTGGAACCACTGGACCCCTGGTGC...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCGCTGGCGGTGGGCAGTaGCCAGCACGCGGACAGAGA +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSAGGGQ*PARGQR
Trigger: TCTCTGTCCGCGTGCTGGCCACTGCCCACCGCCAGC...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCTCCTGCAGCTGGCGGTaGGCAGTGGCCAGCACGCGG +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGSCSWR*AVASTR
Trigger: CCGCGTGCTGGCCACTGCCCACCGCCAGCTGCAGGA...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCCTGCAGGCACCTTTaGGCGGCTGCCCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGPCRHL*AAALQG
Trigger: CCCCTGGAGGGCAGCCGCCCAAAGGTGCCTGCAGGG...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCGGTGGTAGGCAATGCTaGGGCCGGGACTGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSGGRQC*GRDCPG
Trigger: CCCGGGACAGTCCCGGCCCCAGCATTGCCTACCACC...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCGGTGTCTCCACCCAGTaGGGACAGCGGGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSGVSTQ*GQRGQA
Trigger: AGCCTGGCCCCGCTGTCCCCACTGGGTGGAGACACC...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR TCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCCAGCCAGCCATTAGGTaGCAGGCTCCAGCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSQPAIR*QAPAGQ
Trigger: CTGGCCCGCTGGAGCCTGTCACCTAATGGCTGGCTG...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522678.5
CDS-3UTR GCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCGCAGGGCCAGCCGAATaGTCCCAGGGGGCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGAGPAE*SQGAGV
Trigger: CACTCCAGCCCCCTGGGAGCATTCGGCTGGCCCTGC...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCAGCCGGCAGATGTCCTaGAGCTGGCGGTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSSRQMS*SWRWAV
Trigger: CACTGCCCACCGCCAGCTGCAGGACATCTGCCGGCT...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCGCACCTTTGGGCGGCTaGCCTCCAGGGGGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSAPLGG*PPGGCV
Trigger: TACACAGCCCCCTGGAGGGCAGCCGCCCAAAGGTGC...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCCTTCCCCACAGCCCCTaGAGGCACCTTTGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSLPHSP*RHLWAA
Trigger: AGCCGCCCAAAGGTGCCTGCAGGGGCTGTGGGGAAG...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCGGGACAGGGGAGTCCTaGAGCGGCAGCCGGCATGCC +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGGTGES*SGSRHA
Trigger: GGCATGCCGGCTGCCGCTCCAGGACTCCCCTGTCCC...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000479077.5
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCAAGCCCCCTTGGGAATaGGGCTGGGCACCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSKPPWE*GWAPRQ
Trigger: CTGGCGAGGTGCCCAGCCCCATTCCCAAGGGGGCTT...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCGAAGCAGCCAGCAGGTaGGCTGCGCAGGCGGCGGTC +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGEAASR*AAQAAV
Trigger: GACCGCCGCCTGCGCAGCCCACCTGCTGGCTGCTTC...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCGCTGGCGGTGGGCAGTaGCCAGCACGCGGACAGAGA +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGAGGGQ*PARGQR
Trigger: TCTCTGTCCGCGTGCTGGCCACTGCCCACCGCCAGC...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCTCCTGCAGCTGGCGGTaGGCAGTGGCCAGCACGCGG +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGSCSWR*AVASTR
Trigger: CCGCGTGCTGGCCACTGCCCACCGCCAGCTGCAGGA...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCCAGATGTCCTGCAGCTaGCGGTGGGCAGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSQMSCS*RWAVAS
Trigger: GCTGGCCACTGCCCACCGCCAGCTGCAGGACATCTG...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCCTGAGAGGAGCAGTGTaGCCACGTAGGGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSLRGAV*PRRAPS
Trigger: GCTGGGGGCCCTACGTGGCCACACTGCTCCTCTCAG...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCCCCTGCAGGCACCTTTaGGCGGCTGCCCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGPCRHL*AAALQG
Trigger: CCCCTGGAGGGCAGCCGCCCAAAGGTGCCTGCAGGG...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCGGTGGTAGGCAATGCTaGGGCCGGGACTGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGGGRQC*GRDCPG
Trigger: CCCGGGACAGTCCCGGCCCCAGCATTGCCTACCACC...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCGGGACAGGGGAGTCCTaGAGCGGCAGCCGGCATGCA +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGGTGES*SGSRHA
Trigger: TGCATGCCGGCTGCCGCTCCAGGACTCCCCTGTCCC...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519574.2
CDS-3UTR TCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCGACAGGCTGGATGGCTaGGCTGGACGGATGCTCTGG +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSDRLDG*AGRMLW
Trigger: CCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTC...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCGCAGGGCCAGCCGAATaGTCCCAGGGGGCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGAGPAE*SQGAGV
Trigger: CACTCCAGCCCCCTGGGAGCATTCGGCTGGCCCTGC...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCAGCCGGCAGATGTCCTaGAGCTGGCGGTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGSRQMS*SWRWAV
Trigger: CACTGCCCACCGCCAGCTGCAGGACATCTGCCGGCT...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCTCCAGCCTGTGCCCTTaGCTGCCTCCAGGTAAGGGC +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSSSLCP*LPPGKG
Trigger: GCCCTTACCTGGAGGCAGGCAAGGGCACAGGCTGGA...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCCATGGCTACGGGCACTaGCGCTGCACTGGCACTTCC +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSHGYGH*RCTGTS
Trigger: GGAAGTGCCAGTGCAGCGGCAGTGCCCGTAGCCATG...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCGCACCTTTGGGCGGCTaGCCTCCAGGGGGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGAPLGG*PPGGCV
Trigger: TACACAGCCCCCTGGAGGGCAGCCGCCCAAAGGTGC...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCTTCCCCACAGCCCCTaGAGGCACCTTTGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGLPHSP*RHLWAA
Trigger: AGCCGCCCAAAGGTGCCTGCAGGGGCTGTGGGGAAG...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCTTGGGTGGTAGGCAATaGTGGGGCCGGGACTGTCCC +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSLGGRQ*WGRDCP
Trigger: GGGACAGTCCCGGCCCCAGCATTGCCTACCACCCAA...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCGTGTCAGGGAGTTGCTaGAGCCAGCCCTGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSVSGSC*SQPCSG
Trigger: ACCGCTGCAGGGCTGGCTGCAGCAACTCCCTGACAC...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCGGAGCAGGTATTGCCTaGCCAGCCTGGGCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSGAGIA*PAWAFL
Trigger: CAGGAAGGCCCAGGCTGGGCAGGCAATACCTGCTCC...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCGAGCGGCAGCCGGCATaGATGGCTGTTGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGERQPA*MAVGSR
Trigger: CCTGCTCCCAACAGCCATGCATGCCGGCTGCCGCTC...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519574.2
CDS-3UTR CCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTCGAGGGAGCTGGTaGGTCGGAAGGACGCAGGGT +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGPRGSW*VGRTQG
Trigger: ACCCTGCGTCCTTCCGACCCACCAGCTCCCTCGAGG...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS-3UTR CCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCCATCCTCGAGGGAGCTaGTGGGTCGGAAGGACGCAG +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSHPRGS*WVGRTQ
Trigger: CTGCGTCCTTCCGACCCACCAGCTCCCTCGAGGATG...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS-3UTR CCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCCCTTGGGAATGGGGCTaGGCACCTCGCCAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSPWEWG*APRQCC
Trigger: ACAGCACTGGCGAGGTGCCCAGCCCCATTCCCAAGG...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCAAGCCCCCTTGGGAATaGGGCTGGGCACCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGKPPWE*GWAPRQ
Trigger: CTGGCGAGGTGCCCAGCCCCATTCCCAAGGGGGCTT...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCCCCAGGGGGCTGGAGTaGCCTCAGGACTGCCATGTA +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSPRGLE*PQDCHV
Trigger: TACATGGCAGTCCTGAGGCCACTCCAGCCCCCTGGG...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCCCAGAGCGGGCAGACTaGCAAAGAGCAGGGGACCAG +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSPERAD*QRAGDQ
Trigger: CTGGTCCCCTGCTCTTTGCCAGTCTGCCCGCTCTGG...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCGCACCAGGGGTCCAGTaGTTCCACCCCAGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGAPGVQ*FHPRAG
Trigger: GCCCGCTCTGGGGTGGAACCACTGGACCCCTGGTGC...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCAGATGTCCTGCAGCTaGCGGTGGGCAGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGQMSCS*RWAVAS
Trigger: GCTGGCCACTGCCCACCGCCAGCTGCAGGACATCTG...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCGCCCGAAGAGCAGCATaGCTCCAGCCTGTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSARRAA*LQPVPL
Trigger: CAAGGGCACAGGCTGGAGCCATGCTGCTCTTCGGGC...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCTGAGAGGAGCAGTGTaGCCACGTAGGGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGLRGAV*PRRAPS
Trigger: GCTGGGGGCCCTACGTGGCCACACTGCTCCTCTCAG...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCGGTGGTAGGCAATGCTaGGGCCGGGACTGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGGGRQC*GRDCPG
Trigger: CCCGGGACAGTCCCGGCCCCAGCATTGCCTACCACC...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCGGTGTCTCCACCCAGTaGGGACAGCGGGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGGVSTQ*GQRGQA
Trigger: AGCCTGGCCCCGCTGTCCCCACTGGGTGGAGACACC...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR TCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCCTCATAGGCCAGGACTaGGAGGAGCAGTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSLIGQD*EEQCGH
Trigger: GTGGCCACACTGCTCCTCTCAGTCCTGGCCTATGAG...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCTGGCTGTGCCAGCTCTaGACAGCCAGTCAGGGATCC +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSWLCQL*TASQGS
Trigger: GGATCCCTGACTGGCTGTGCAGAGCTGGCACAGCCA...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS-3UTR GCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCGCAAAGGGACTCTGGTaGTCTCCGGGAGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGAKGLW*SPGELG
Trigger: GCCCAGCTCTCCCGGAGAGCACCAGAGTCCCTTTGC...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS-3UTR GCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCGAGTGGCCTCAGGACTaGCATGTAGCGCTCCCCGTG +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGEWPQD*HVALPV
Trigger: CACGGGGAGCGCTACATGGCAGTCCTGAGGCCACTC...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCTCCAGCCTGTGCCCTTaGCTGCCTCCAGGTAAGGGC +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGSSLCP*LPPGKG
Trigger: GCCCTTACCTGGAGGCAGGCAAGGGCACAGGCTGGA...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCATGGCTACGGGCACTaGCGCTGCACTGGCACTTCC +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGHGYGH*RCTGTS
Trigger: GGAAGTGCCAGTGCAGCGGCAGTGCCCGTAGCCATG...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCTTGGGTGGTAGGCAATaGTGGGGCCGGGACTGTCCC +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGLGGRQ*WGRDCP
Trigger: GGGACAGTCCCGGCCCCAGCATTGCCTACCACCCAA...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCTGCTGCAGCCAGCCCTaGAGCGGTTTGGACCATGTC +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSCCSQP*SGLDHV
Trigger: GACATGGTCCAAACCGCTGCAGGGCTGGCTGCAGCA...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCGTGTCAGGGAGTTGCTaGAGCCAGCCCTGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGVSGSC*SQPCSG
Trigger: ACCGCTGCAGGGCTGGCTGCAGCAACTCCCTGACAC...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCCCTCGCCAGTGCTGTTaGGCGTCATCTTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSPRQCC*ASSWSW
Trigger: CCAGGACCAAGATGACGCCCAACAGCACTGGCGAGG...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCCAGGGGGCTGGAGTaGCCTCAGGACTGCCATGTA +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGPRGLE*PQDCHV
Trigger: TACATGGCAGTCCTGAGGCCACTCCAGCCCCCTGGG...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCCAGATGTCCTGCAGCTaGCGGTGGGCAGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGQMSCS*RWAVAS
Trigger: GCTGGCCACTGCCCACCGCCAGCTGCAGGACATCTG...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCGCCCGAAGAGCAGCATaGCTCCAGCCTGTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGARRAA*LQPVPL
Trigger: CAAGGGCACAGGCTGGAGCCATGCTGCTCTTCGGGC...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCGCACTGCCGCTGCACTaGCACTTCCTAGGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSALPLH*HFLGRG
Trigger: TCCTCTCCCTAGGAAGTGCCAGTGCAGCGGCAGTGC...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCCCGGTAGAGACAGGCTaGATGGCTGAGCTGGACGGA +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSPVETG*MAELDG
Trigger: TCCGTCCAGCTCAGCCATCCAGCCTGTCTCTACCGG...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR TCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCGACAGGCTGGATGGCTaGGCTGGACGGATGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGDRLDG*AGRMLW
Trigger: CCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTC...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR TCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCCAGAGGCAGGGTCTCTaGTCCAGAGAAGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGQRQGL*SREVGP
Trigger: GGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTG...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCTGGGCACCTCGCCAGTaGTGTTGGGCGTCATCTTGG +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGWAPRQ*CWASSW
Trigger: CCAAGATGACGCCCAACAGCACTGGCGAGGTGCCCA...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCTGGCAATGTGGGCAATaGCAGACCCGTGAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGWQCGQ*QTREQP
Trigger: GGGCTGCTCACGGGTCTGGCATTGCCCACATTGCCA...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCGAGTGGCCTCAGGACTaGCATGTAGCGCTCCCCGTG +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGEWPQD*HVALPV
Trigger: CACGGGGAGCGCTACATGGCAGTCCTGAGGCCACTC...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCTCCAGCCTGTGCCCTTaGCTGCCTCCAGGTAAGGGC +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGSSLCP*LPPGKG
Trigger: GCCCTTACCTGGAGGCAGGCAAGGGCACAGGCTGGA...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCCATGGCTACGGGCACTaGCGCTGCACTGGCACTTCC +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGHGYGH*RCTGTS
Trigger: GGAAGTGCCAGTGCAGCGGCAGTGCCCGTAGCCATG...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCTTGGGTGGTAGGCAATaGTGGGGCCGGGACTGTCCC +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGLGGRQ*WGRDCP
Trigger: GGGACAGTCCCGGCCCCAGCATTGCCTACCACCCAA...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCGCTGAGCTGGACGGATaGTCTGGTAGGAGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSAELDG*SGRSQQ
Trigger: CTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGC...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCTGCTGCAGCCAGCCCTaGAGCGGTTTGGACCATGTC +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGCCSQP*SGLDHV
Trigger: GACATGGTCCAAACCGCTGCAGGGCTGGCTGCAGCA...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCGGAGCAGGTATTGCCTaGCCAGCCTGGGCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGGAGIA*PAWAFL
Trigger: CAGGAAGGCCCAGGCTGGGCAGGCAATACCTGCTCC...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCGGAGCAAAGGGACTCTaGTGCTCTCCGGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGGAKGL*CSPGEL
Trigger: CAGCTCTCCCGGAGAGCACCAGAGTCCCTTTGCTCC...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS-3UTR CCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCTGTTGGGCGTCATCTTaGTCCTGGGGACAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSCWASS*SWGQGS
Trigger: ACTCCCCTGTCCCCAGGACCAAGATGACGCCCAACA...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTCGCCAGTGCTGTTaGGCGTCATCTTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGPRQCC*ASSWSW
Trigger: CCAGGACCAAGATGACGCCCAACAGCACTGGCGAGG...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCCCTTGGGAATGGGGCTaGGCACCTCGCCAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGPWEWG*APRQCC
Trigger: ACAGCACTGGCGAGGTGCCCAGCCCCATTCCCAAGG...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCCTGGTTCCACAGCCCTaGCAATGTGGGCAATGCCAG +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSLVPQP*QCGQCQ
Trigger: CTGGCATTGCCCACATTGCCAGGGCTGTGGAACCAG...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCGCACCAGCAAGAGGTTaGCAAGCAGGGAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSAPARG*QAGRGR
Trigger: CCTTCCTCTCCCTGCTTGCCAACCTCTTGCTGGTGC...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCCCCAGGGGGCTGGAGTaGCCTCAGGACTGCCATGTA +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGPRGLE*PQDCHV
Trigger: TACATGGCAGTCCTGAGGCCACTCCAGCCCCCTGGG...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCCCAGAGCGGGCAGACTaGCAAAGAGCAGGGGACCAG +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGPERAD*QRAGDQ
Trigger: CTGGTCCCCTGCTCTTTGCCAGTCTGCCCGCTCTGG...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCGCTGGGAAGATAGCCTaGGAGCTGCAGTTGGCACCA +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSAGKIA*ELQLAP
Trigger: TGGTGCCAACTGCAGCTCCCAGGCTATCTTCCCAGC...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCGCACTGCCGCTGCACTaGCACTTCCTAGGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGALPLH*HFLGRG
Trigger: TCCTCTCCCTAGGAAGTGCCAGTGCAGCGGCAGTGC...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCGCTGGATGGCTGAGCTaGACGGATGCTCTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSAGWLS*TDALVG
Trigger: TCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCTCTGATCCAGAGAAGTaGGGCCCGGTAGAGACAGGC +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSSDPEK*GPVETG
Trigger: GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGA...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCAGTGGACCAAGTGCATaGTGTCTCCACCCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSSGPSA*CLHPVG
Trigger: CCCCACTGGGTGGAGACACCATGCACTTGGTCCACT...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCAGCCCTGCAGCGGTTTaGACCATGTCTGGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSSPAAV*TMSGVL
Trigger: CAGGACACCAGACATGGTCCAAACCGCTGCAGGGCT...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCGGCATGCATGGCTGTTaGGAGCAGGTATTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSGMHGC*EQVLPA
Trigger: GGCAGGCAATACCTGCTCCCAACAGCCATGCATGCC...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519574.2
CDS-3UTR CCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCGGCAGCCGGCATGCATaGCTGTTGGGAGCAGGTATT +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSGSRHA*LLGAGI
Trigger: AATACCTGCTCCCAACAGCCATGCATGCCGGCTGCC...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519574.2
CDS-3UTR CCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCTGGACCAGGGCTGGCTaGTGTGTAGTGGTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSWTRAG*CVVVFQ
Trigger: CTGGAAGACCACTACACACCAGCCAGCCCTGGTCCA...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522678.5
CDS-3UTR TCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCCTAAGACAGATCTGCTaGGAGGGGCGCATGGGGAGC +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGLRQIC*EGRMGS
Trigger: GCTCCCCATGCGCCCCTCTCAGCAGATCTGTCTTAG...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS-3UTR TCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCCTCATAGGCCAGGACTaGGAGGAGCAGTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGLIGQD*EEQCGH
Trigger: GTGGCCACACTGCTCCTCTCAGTCCTGGCCTATGAG...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR TCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCGTCTGGTGTCCTGGCTaGAGAGCACAAGTGGACCAA +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSVWCPG*RAQVDQ
Trigger: TTGGTCCACTTGTGCTCTTCAGCCAGGACACCAGAC...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR TCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCGTCTCTTGTTTAGACTaGAAGGCGGGCCCATCCAGC +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSVSCLD*KAGPSS
Trigger: GCTGGATGGGCCCGCCTTTCAGTCTAAACAAGAGAC...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522678.5
CDS-3UTR GCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCTGGGCACCTCGCCAGTaGTGTTGGGCGTCATCTTGG +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGWAPRQ*CWASSW
Trigger: CCAAGATGACGCCCAACAGCACTGGCGAGGTGCCCA...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCTGGCAATGTGGGCAATaGCAGACCCGTGAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGWQCGQ*QTREQP
Trigger: GGGCTGCTCACGGGTCTGGCATTGCCCACATTGCCA...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCCGACACTGCTTTGGCTaGTTGGGTGGTAGGCAATGC +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSRHCFG*LGGRQC
Trigger: GCATTGCCTACCACCCAAGCAGCCAAAGCAGTGTCG...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCAGTCCAGGTCGACACTaGTTTGGCTGCTTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSSPGRH*FGCLGG
Trigger: ACCACCCAAGCAGCCAAAGCAGTGTCGACCTGGACT...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCGCTGAGCTGGACGGATaGTCTGGTAGGAGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGAELDG*SGRSQQ
Trigger: CTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGC...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCGCTGAGAGGGGCGCATaGGGAGCTTGGGAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGAERGA*GAWEKQ
Trigger: TTGCTTTTCCCAAGCTCCCCATGCGCCCCTCTCAGC...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS-3UTR CCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCCCTCGCCAGTGCTGTTaGGCGTCATCTTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGPRQCC*ASSWSW
Trigger: CCAGGACCAAGATGACGCCCAACAGCACTGGCGAGG...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCTGGTTCCACAGCCCTaGCAATGTGGGCAATGCCAG +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGLVPQP*QCGQCQ
Trigger: CTGGCATTGCCCACATTGCCAGGGCTGTGGAACCAG...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCGCACCAGCAAGAGGTTaGCAAGCAGGGAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGAPARG*QAGRGR
Trigger: CCTTCCTCTCCCTGCTTGCCAACCTCTTGCTGGTGC...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCGCTGGGAAGATAGCCTaGGAGCTGCAGTTGGCACCA +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGAGKIA*ELQLAP
Trigger: TGGTGCCAACTGCAGCTCCCAGGCTATCTTCCCAGC...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCCCGGTAGAGACAGGCTaGATGGCTGAGCTGGACGGA +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGPVETG*MAELDG
Trigger: TCCGTCCAGCTCAGCCATCCAGCCTGTCTCTACCGG...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCTCTGATCCAGAGAAGTaGGGCCCGGTAGAGACAGGC +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGSDPEK*GPVETG
Trigger: GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGA...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCTGGCCAGAGTTAGGATaGGGCTGCAGGTCGTGTCCT +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGWPELG*GCRSCP
Trigger: AGGACACGACCTGCAGCCCCATCCTAACTCTGGCCA...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCCAGACCCGCAGGCTGTaGGCTGTATCATGTTCGATG +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSQTRRL*AVSCSM
Trigger: CATCGAACATGATACAGCCCACAGCCTGCGGGTCTG...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521462.1
CDS-3UTR TCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCAAAGCAAGAGGGGAGTaGCACTCTTGCTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGKARGE*HSCCTG
Trigger: CCCTGTGCAGCAAGAGTGTCACTCCCCTCTTGCTTT...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS-3UTR TCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCGTCTGGTGTCCTGGCTaGAGAGCACAAGTGGACCAA +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGVWCPG*RAQVDQ
Trigger: TTGGTCCACTTGTGCTCTTCAGCCAGGACACCAGAC...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR TCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCGGGGAGGCCTCTAAATaGGAGAATGGACCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGGEASK*ENGPGL
Trigger: CAGCCCTGGTCCATTCTCTCATTTAGAGGCCTCCCC...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522678.5
CDS-3UTR GCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCACCTTGTATCAAGTaGGGCTTTGGAGTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGPPCIK*GFGVRG
Trigger: CCCCCTCACTCCAAAGCCGCACTTGATACAAGGTGG...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS-3UTR GCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCGACACTGCTTTGGCTaGTTGGGTGGTAGGCAATGC +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGRHCFG*LGGRQC
Trigger: GCATTGCCTACCACCCAAGCAGCCAAAGCAGTGTCG...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCAGTCCAGGTCGACACTaGTTTGGCTGCTTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGSPGRH*FGCLGG
Trigger: ACCACCCAAGCAGCCAAAGCAGTGTCGACCTGGACT...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCTGTTGGGCGTCATCTTaGTCCTGGGGACAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGCWASS*SWGQGS
Trigger: ACTCCCCTGTCCCCAGGACCAAGATGACGCCCAACA...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCGCACCAGCAAGAGGTTaGCAAGCAGGGAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGAPARG*QAGRGR
Trigger: CCTTCCTCTCCCTGCTTGCCAACCTCTTGCTGGTGC...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCGCTGGGAAGATAGCCTaGGAGCTGCAGTTGGCACCA +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGAGKIA*ELQLAP
Trigger: TGGTGCCAACTGCAGCTCCCAGGCTATCTTCCCAGC...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCACTGCTTTGGCTGCTTaGGTGGTAGGCAATGCTGGG +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGTALAA*VVGNAG
Trigger: CCCAGCATTGCCTACCACCCAAGCAGCCAAAGCAGT...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCGCTGGATGGCTGAGCTaGACGGATGCTCTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGAGWLS*TDALVG
Trigger: TCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCTCTGATCCAGAGAAGTaGGGCCCGGTAGAGACAGGC +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGSDPEK*GPVETG
Trigger: GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGA...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCAGTGGACCAAGTGCATaGTGTCTCCACCCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGSGPSA*CLHPVG
Trigger: CCCCACTGGGTGGAGACACCATGCACTTGGTCCACT...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCCCATGTCTGGTGTCCTaGCTGAAGAGCACAAGTGGA +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSPCLVS*LKSTSG
Trigger: TCCACTTGTGCTCTTCAGCCAGGACACCAGACATGG...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCAGCCCTGCAGCGGTTTaGACCATGTCTGGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGSPAAV*TMSGVL
Trigger: CAGGACACCAGACATGGTCCAAACCGCTGCAGGGCT...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCCTGGGAGATGGCTGTTaGGAGCAGGTATTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGLGDGC*EQVLPA
Trigger: GGCAGGCAATACCTGCTCCCAACAGCCATCTCCCAG...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522678.5
CDS-3UTR CCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCGTCCTTCCTGGGAGATaGCTGTTGGGAGCAGGTATT +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSVLPGR*LLGAGI
Trigger: AATACCTGCTCCCAACAGCCATCTCCCAGGAAGGAC...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522678.5
CDS-3UTR CCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCCAACAGGGTCCTTCCTaGGAGATGGCTGTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGQQGPS*EMAVGS
Trigger: GCTCCCAACAGCCATCTCCCAGGAAGGACCCTGTTG...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522678.5
CDS-3UTR CCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCCAGACCCGCAGGCTGTaGGCTGTATCATGTTCGCTG +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGQTRRL*AVSCSL
Trigger: CAGCGAACATGATACAGCCCACAGCCTGCGGGTCTG...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522678.5
CDS-3UTR GCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCCGACACTGCTTTGGCTaGTTGGGTGGTAGGCAATGC +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGRHCFG*LGGRQC
Trigger: GCATTGCCTACCACCCAAGCAGCCAAAGCAGTGTCG...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCAGTCCAGGTCGACACTaGTTTGGCTGCTTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGSPGRH*FGCLGG
Trigger: ACCACCCAAGCAGCCAAAGCAGTGTCGACCTGGACT...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCACAAGTGGACCAAGTaGATGGTGTCTCCACCCAGT +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGHKWTK*MVSPPS
Trigger: ACTGGGTGGAGACACCATGCACTTGGTCCACTTGTG...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCTATCAAGTGCGGCTTTaGAGTGAGGGGGAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGYQVRL*SEGEER
Trigger: TCTCTCCTCCCCCTCACTCCAAAGCCGCACTTGATA...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS-3UTR CCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCACTGCTTTGGCTGCTTaGGTGGTAGGCAATGCTGGG +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGTALAA*VVGNAG
Trigger: CCCAGCATTGCCTACCACCCAAGCAGCCAAAGCAGT...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCGCTGAAGAGCACAAGTaGACCAAGTGCATGGTGTCT +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSAEEHK*TKCMVS
Trigger: AGACACCATGCACTTGGTCCACTTGTGCTCTTCAGC...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCATGTCTGGTGTCCTaGCTGAAGAGCACAAGTGGA +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGPCLVS*LKSTSG
Trigger: TCCACTTGTGCTCTTCAGCCAGGACACCAGACATGG...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCAGAATGGACCAGGGCTaGCTGGTGTGTAGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGRMDQG*LVCSGL
Trigger: AAGACCACTACACACCAGCCAGCCCTGGTCCATTCT...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522678.5
CDS-3UTR CCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCCAGGTCGTGTCCTCCTaGCAGGGCAGCATGTTAATC +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGQVVSS*QGSMLI
Trigger: GATTAACATGCTGCCCTGCCAGGAGGACACGACCTG...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCGGAACAGGCGGAAATTaGAGCAGGAAAGCTGGGACT +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGGTGGN*SRKAGT
Trigger: AGTCCCAGCTTTCCTGCTGCAATTTCCGCCTGTTCC...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS-3UTR GCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCGCTTTATTCAGTCAGTaGGGGGTCAAACAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGALFSQ*GVKQRQ
Trigger: CTGCCTCTGTTTGACCCCGCACTGACTGAATAAAGC...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR GCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCCACAAGTGGACCAAGTaGATGGTGTCTCCACCCAGT +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGHKWTK*MVSPPS
Trigger: ACTGGGTGGAGACACCATGCACTTGGTCCACTTGTG...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCGCCAGTCAGGGATCCTaGAGATCAGGGACTTCTGTT +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGASQGS*RSGTSV
Trigger: AACAGAAGTCCCTGATCTCCAGGATCCCTGACTGGC...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS-3UTR CCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCGCTGAAGAGCACAAGTaGACCAAGTGCATGGTGTCT +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGAEEHK*TKCMVS
Trigger: AGACACCATGCACTTGGTCCACTTGTGCTCTTCAGC...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCCCATGTCTGGTGTCCTaGCTGAAGAGCACAAGTGGA +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGPCLVS*LKSTSG
Trigger: TCCACTTGTGCTCTTCAGCCAGGACACCAGACATGG...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCATGTTCGATGGCTGTTaGGAGCAGGTATTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGMFDGC*EQVLPA
Trigger: GGCAGGCAATACCTGCTCCCAACAGCCATCGAACAT...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521462.1
CDS-3UTR GCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCAACTTGACTCGTCTTTaGTCCACACTAGCAACAGGG +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGNLTRL*STLATG
Trigger: CCCTGTTGCTAGTGTGGAGCAAAGACGAGTCAAGTT...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522678.5
CDS-3UTR CCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCGCTGAAGAGCACAAGTaGACCAAGTGCATGGTGTCT +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGAEEHK*TKCMVS
Trigger: AGACACCATGCACTTGGTCCACTTGTGCTCTTCAGC...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCGGTATCTGCCTTTTCTaGGCAGCTGTGTTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGGICLF*AAVLRS
Trigger: AGACCTCAACACAGCTGCCCAGAAAAGGCAGATACC...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522678.5
CDS-3UTR TCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCGGAAACCAGATACATTaGGAGGGAAGGGCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGGNQIH*EGRASS
Trigger: TGAACTTGCCCTTCCCTCTCAATGTATCTGGTTTCC...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS-3UTR GCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCACATTAGGAAACACTTaGTGGCTGAAGAGCGCAAGT +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGTLGNT*WLKSAS
Trigger: ACTTGCGCTCTTCAGCCAGCAAGTGTTTCCTAATGT...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS-3UTR CCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCATCAGGGACTTCTGTTaGGACAAAAAGTGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGIRDFC*DKKWEE
Trigger: CTCTTCCCACTTTTTGTCCCAACAGAAGTCCCTGAT...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS-3UTR CCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCCTGGGAAGCCAGAAGTaGTGCTTTGATTTCCACCTT +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGLGSQK*CFDFHL
Trigger: AAGGTGGAAATCAAAGCACCACTTCTGGCTTCCCAG...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS-3UTR CCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCTGTATCATGTTCGATaGCTGTTGGGAGCAGGTATT +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGLYHVR*LLGAGI
Trigger: AATACCTGCTCCCAACAGCCATCGAACATGATACAG...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521462.1
CDS-3UTR GCA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCGGAAGCCAGAAGTGGTaGTTTGATTTCCACCTTGTA +
Preference number: 4 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGGSQKW*FDFHLV
Trigger: TACAAGGTGGAAATCAAAGCACCACTTCTGGCTTCC...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS-3UTR TCA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCATCTTTGGTTTCTATTaGAAATTCAGGTCTGGCAAC +
Preference number: 4 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSIFGFY*KFRSGN
Trigger: GTTGCCAGACCTGAATTTTCAATAGAAACCAAAGAT...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522678.5
CDS-3UTR CCA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCTTGAAAATTCAGGTCTaGCAACACATATGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGLKIQV*QHICPV
Trigger: CACAGGACATATGTGTTGCCAGACCTGAATTTTCAA...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522678.5
CDS GCA 90 bp CCAGGTAAGGGCCCGGGCCAGGGCGGAGGGCTCATCGCGGCACACTaGCCGCTCCAGCCGGCAGATGTCCTGCAGCTGGCGGTGGGCAGT +
Preference number: 5 (lower is better)
Translates to: PGKGPGQGGGLIAAH*PLQPADVLQLAVGS
Trigger: ACTGCCCACCGCCAGCTGCAGGACATCTGCCGGCTGGAGCGGGCAGTGTGCCGCGATGAGCCCTCCGCCCTGGCCCGGGCCCTTACCTGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS CCA 90 bp CTGCCCGCTCCAGCCGGCAGATGTCCTGCAGCTGGCGGTGGGCAGTaGCCAGCACGCGGACAGAGAGGAAGGCAGCAGCACCCACGGCGG +
Preference number: 5 (lower is better)
Translates to: LPAPAGRCPAAGGGQ*PARGQRGRQQHPRR
Trigger: CCGCCGTGGGTGCTGCTGCCTTCCTCTCTGTCCGCGTGCTGGCCACTGCCCACCGCCAGCTGCAGGACATCTGCCGGCTGGAGCGGGCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS GCA 90 bp CCCCCAGCACAGCCCGAAGAGCAGCATGGCTCCAGCCTGTGCCCTTaGCTGCCTCCAGGTAAGGGCCCGGGCCAGGGCGGAGGGCTCATC +
Preference number: 5 (lower is better)
Translates to: PPAQPEEQHGSSLCP*LPPGKGPGQGGGLI
Trigger: GATGAGCCCTCCGCCCTGGCCCGGGCCCTTACCTGGAGGCAGGCAAGGGCACAGGCTGGAGCCATGCTGCTCTTCGGGCTGTGCTGGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS GCA 90 bp GAGGGCTCATCGCGGCACACTGCCCGCTCCAGCCGGCAGATGTCCTaGAGCTGGCGGTGGGCAGTGGCCAGCACGCGGACAGAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: EGSSRHTARSSRQMS*SWRWAVASTRTERK
Trigger: CTTCCTCTCTGTCCGCGTGCTGGCCACTGCCCACCGCCAGCTGCAGGACATCTGCCGGCTGGAGCGGGCAGTGTGCCGCGATGAGCCCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS CCA 90 bp TGGGGCTGGGCACCTCGCCAGTGCTGTTGGGCGTCATCTTGGTCCTaGGGACAGGGGAGTCCTGGAGCGGCAGCCGGCATGCCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: WGWAPRQCCWASSWS*GQGSPGAAAGMPAG
Trigger: TCCTGCAGGCATGCCGGCTGCCGCTCCAGGACTCCCCTGTCCCCAGGACCAAGATGACGCCCAACAGCACTGGCGAGGTGCCCAGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521462.1
ENST00000522678.5
CDS CCA 90 bp TGGGGCTGGGCACCTCGCCAGTGCTGTTGGGCGTCATCTTGGTCCTaGGGACAGGGGAGTCCTGGAGCGGCAGCCGGCATGCCTATCGTG +
Preference number: 5 (lower is better)
Translates to: WGWAPRQCCWASSWS*GQGSPGAAAGMPIV
Trigger: CACGATAGGCATGCCGGCTGCCGCTCCAGGACTCCCCTGTCCCCAGGACCAAGATGACGCCCAACAGCACTGGCGAGGTGCCCAGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS CCA 90 bp TGGGGCTGGGCACCTCGCCAGTGCTGTTGGGCGTCATCTTGGTCCTaGGGACAGGGGAGTCCTGGAGCGGCAGCCGGCATGCATGGCTGT +
Preference number: 5 (lower is better)
Translates to: WGWAPRQCCWASSWS*GQGSPGAAAGMHGC
Trigger: ACAGCCATGCATGCCGGCTGCCGCTCCAGGACTCCCCTGTCCCCAGGACCAAGATGACGCCCAACAGCACTGGCGAGGTGCCCAGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519574.2
CDS GCA 90 bp CAGGGCCAGCCGAATGCTCCCAGGGGGCTGGAGTGGCCTCAGGACTaGCATGTAGCGCTCCCCGTGCACCAGCAAGAGGTTGGCAAGCAG +
Preference number: 5 (lower is better)
Translates to: QGQPNAPRGLEWPQD*HVALPVHQQEVGKQ
Trigger: CTGCTTGCCAACCTCTTGCTGGTGCACGGGGAGCGCTACATGGCAGTCCTGAGGCCACTCCAGCCCCCTGGGAGCATTCGGCTGGCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS CCA 90 bp AGCGCTGATCGCCCAGCCCCATGGCTACGGGCACTGCCGCTGCACTaGCACTTCCTAGGGAGAGGAGGGACAACAGTGTCCCAGGCCCCA +
Preference number: 5 (lower is better)
Translates to: SADRPAPWLRALPLH*HFLGRGGTTVSQAP
Trigger: TGGGGCCTGGGACACTGTTGTCCCTCCTCTCCCTAGGAAGTGCCAGTGCAGCGGCAGTGCCCGTAGCCATGGGGCTGGGCGATCAGCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS TCA 90 bp ACCAGGGCTGGCTGGTGTGTAGTGGTCTTCCAGCCAGCCATTAGGTaGCAGGCTCCAGCGGGCCAGGTCTCGGGCACCCTGCACCCTTCC +
Preference number: 5 (lower is better)
Translates to: TRAGWCVVVFQPAIR*QAPAGQVSGTLHPS
Trigger: GGAAGGGTGCAGGGTGCCCGAGACCTGGCCCGCTGGAGCCTGTCACCTAATGGCTGGCTGGAAGACCACTACACACCAGCCAGCCCTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522678.5
CDS CCA 90 bp GAGGAGGCAGGACCAGTAACCCCGGCGACTCTGGTTCCACAGCCCTaGCAATGTGGGCAATGCCAGACCCGTGAGCAGCCCAGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: EEAGPVTPATLVPQP*QCGQCQTREQPSQQ
Trigger: CTGCTGGCTGGGCTGCTCACGGGTCTGGCATTGCCCACATTGCCAGGGCTGTGGAACCAGAGTCGCCGGGGTTACTGGTCCTGCCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS CCA 90 bp AGTCCAGGTCGACACTGCTTTGGCTGCTTGGGTGGTAGGCAATGCTaGGGCCGGGACTGTCCCGGGAGGCTCTTCCCCACAGCCCCTGCA +
Preference number: 5 (lower is better)
Translates to: SPGRHCFGCLGGRQC*GRDCPGRLFPTAPA
Trigger: TGCAGGGGCTGTGGGGAAGAGCCTCCCGGGACAGTCCCGGCCCCAGCATTGCCTACCACCCAAGCAGCCAAAGCAGTGTCGACCTGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS GCA 90 bp TGGAGCGGCAGCCGGCATGCATGGCTGTTGGGAGCAGGTATTGCCTaGCCAGCCTGGGCCTTCCTGAGTGTCAGGGAGTTGCTGCAGCCA +
Preference number: 5 (lower is better)
Translates to: WSGSRHAWLLGAGIA*PAWAFLSVRELLQP
Trigger: TGGCTGCAGCAACTCCCTGACACTCAGGAAGGCCCAGGCTGGGCAGGCAATACCTGCTCCCAACAGCCATGCATGCCGGCTGCCGCTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519574.2
CDS CCA 90 bp GGCGGGCAGCAGGAGCCCATAGACTTCGAGGTACAGGTAGGGGGCTaGGAAGATAGCCTGGGAGCTGCAGTTGGCACCAGGGGTCCAGTG +
Preference number: 5 (lower is better)
Translates to: GGQQEPIDFEVQVGG*EDSLGAAVGTRGPV
Trigger: CACTGGACCCCTGGTGCCAACTGCAGCTCCCAGGCTATCTTCCCAGCCCCCTACCTGTACCTCGAAGTCTATGGGCTCCTGCTGCCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CAA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCCTGTTGGGCGTCATCTaGGTCCTGGGGACAGGGGAG +
Preference number: 5 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSLLGVI*VLGTGE
Trigger: CTCCCCTGTCCCCAGGACCAAGATGACGCCCAACAG...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CAA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCCTGAGTGTCAGGGAGTaGCTGCAGCCAGCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSLSVRE*LQPALQ
Trigger: CTGCAGGGCTGGCTGCAGCAACTCCCTGACACTCAG...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS GCA 90 bp TGGACCATGTCTGGTGTCCTGGCTGAAGAGCACAAGTGGACCAAGTaGATGGTGTCTCCACCCAGTGGGGACAGCGGGGCCAGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: WTMSGVLAEEHKWTK*MVSPPSGDSGARLS
Trigger: GGAGAGCCTGGCCCCGCTGTCCCCACTGGGTGGAGACACCATGCACTTGGTCCACTTGTGCTCTTCAGCCAGGACACCAGACATGGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS CCA 90 bp GAAGAGGAAAGCATCCAGCCTCAAGTCCATCCTCGAGGGAGCTGGTaGGTCGGAAGGACGCAGGGTTCCAGGGCCGGTCCTCAGAACCAC +
Preference number: 5 (lower is better)
Translates to: EEESIQPQVHPRGSW*VGRTQGSRAGPQNH
Trigger: GTGGTTCTGAGGACCGGCCCTGGAACCCTGCGTCCTTCCGACCCACCAGCTCCCTCGAGGATGGACTTGAGGCTGGATGCTTTCCTCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS CCA 90 bp TGGGAAGAGGAAAGCATCCAGCCTCAAGTCCATCCTCGAGGGAGCTaGTGGGTCGGAAGGACGCAGGGTTCCAGGGCCGGTCCTCAGAAC +
Preference number: 5 (lower is better)
Translates to: WEEESIQPQVHPRGS*WVGRTQGSRAGPQN
Trigger: GTTCTGAGGACCGGCCCTGGAACCCTGCGTCCTTCCGACCCACCAGCTCCCTCGAGGATGGACTTGAGGCTGGATGCTTTCCTCTTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS CCA 90 bp CCATGTCTGGTGTCCTGGCTGAAGAGCACAAGTGGACCAAGTGCATaGTGTCTCCACCCAGTGGGGACAGCGGGGCCAGGCTCTCCTACC +
Preference number: 5 (lower is better)
Translates to: PCLVSWLKSTSGPSA*CLHPVGTAGPGSPT
Trigger: GGTAGGAGAGCCTGGCCCCGCTGTCCCCACTGGGTGGAGACACCATGCACTTGGTCCACTTGTGCTCTTCAGCCAGGACACCAGACATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS CCA 90 bp GCAGCGGTTTGGACCATGTCTGGTGTCCTGGCTGAAGAGCACAAGTaGACCAAGTGCATGGTGTCTCCACCCAGTGGGGACAGCGGGGCC +
Preference number: 5 (lower is better)
Translates to: AAVWTMSGVLAEEHK*TKCMVSPPSGDSGA
Trigger: GGCCCCGCTGTCCCCACTGGGTGGAGACACCATGCACTTGGTCCACTTGTGCTCTTCAGCCAGGACACCAGACATGGTCCAAACCGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CAA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCACCTCGCCAGTGCTGTaGGGCGTCATCTTGGTCCTG +
Preference number: 5 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSTSPVL*GVILVL
Trigger: CAGGACCAAGATGACGCCCAACAGCACTGGCGAGGT...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CAA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCCAGGTCGACACTGCTTaGGCTGCTTGGGTGGTAGGC +
Preference number: 5 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSQVDTA*AAWVVG
Trigger: GCCTACCACCCAAGCAGCCAAAGCAGTGTCGACCTG...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CAA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCCAGCCCTGCAGCGGTTaGGACCATGTCTGGTGTCCT +
Preference number: 5 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSQPCSG*DHVWCP
Trigger: AGGACACCAGACATGGTCCAAACCGCTGCAGGGCTG...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CAA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCTGAGTGTCAGGGAGTaGCTGCAGCCAGCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGLSVRE*LQPALQ
Trigger: CTGCAGGGCTGGCTGCAGCAACTCCCTGACACTCAG...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CAA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCCGGCATGCATGGCTGTaGGGAGCAGGTATTGCCTGC +
Preference number: 5 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSRHAWL*GAGIAC
Trigger: GCAGGCAATACCTGCTCCCAACAGCCATGCATGCCG...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519574.2
CDS GCA 90 bp AGAGGCCCTTCCTTTAGTTCAAGTCCAGGTCGACACTGCTTTGGCTaGTTGGGTGGTAGGCAATGCTGGGGCCGGGACTGTCCCGGGAGG +
Preference number: 5 (lower is better)
Translates to: RGPSFSSSPGRHCFG*LGGRQCWGRDCPGR
Trigger: CCTCCCGGGACAGTCCCGGCCCCAGCATTGCCTACCACCCAAGCAGCCAAAGCAGTGTCGACCTGGACTTGAACTAAAGGAAGGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS GCA 90 bp AACAGGGTCCTTCCTGGGAGATGGCTGTTGGGAGCAGGTATTGCCTaGCCAGCCTGGGCCTTCCTGAGTGTCAGGGAGTTGCTGCAGCCA +
Preference number: 5 (lower is better)
Translates to: NRVLPGRWLLGAGIA*PAWAFLSVRELLQP
Trigger: TGGCTGCAGCAACTCCCTGACACTCAGGAAGGCCCAGGCTGGGCAGGCAATACCTGCTCCCAACAGCCATCTCCCAGGAAGGACCCTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522678.5
CDS CCA 90 bp GCCCTTCCTTTAGTTCAAGTCCAGGTCGACACTGCTTTGGCTGCTTaGGTGGTAGGCAATGCTGGGGCCGGGACTGTCCCGGGAGGCTCT +
Preference number: 5 (lower is better)
Translates to: ALPLVQVQVDTALAA*VVGNAGAGTVPGGS
Trigger: AGAGCCTCCCGGGACAGTCCCGGCCCCAGCATTGCCTACCACCCAAGCAGCCAAAGCAGTGTCGACCTGGACTTGAACTAAAGGAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CAA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCGACTCAGATCAACACTaGGCCCTTCAGCACTCCGCG +
Preference number: 5 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSDSDQH*ALQHSA
Trigger: CGCGGAGTGCTGAAGGGCCAAGTGTTGATCTGAGTC...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS-3UTR CAA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCCTGTTGGGCGTCATCTaGGTCCTGGGGACAGGGGAG +
Preference number: 5 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGLLGVI*VLGTGE
Trigger: CTCCCCTGTCCCCAGGACCAAGATGACGCCCAACAG...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CAA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCACCTCGCCAGTGCTGTaGGGCGTCATCTTGGTCCTG +
Preference number: 5 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGTSPVL*GVILVL
Trigger: CAGGACCAAGATGACGCCCAACAGCACTGGCGAGGT...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CAA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCAGGTCGACACTGCTTaGGCTGCTTGGGTGGTAGGC +
Preference number: 5 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGQVDTA*AAWVVG
Trigger: GCCTACCACCCAAGCAGCCAAAGCAGTGTCGACCTG...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CAA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCAGCCCTGCAGCGGTTaGGACCATGTCTGGTGTCCT +
Preference number: 5 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGQPCSG*DHVWCP
Trigger: AGGACACCAGACATGGTCCAAACCGCTGCAGGGCTG...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CAA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCCTGAGTGTCAGGGAGTaGCTGCAGCCAGCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGLSVRE*LQPALQ
Trigger: CTGCAGGGCTGGCTGCAGCAACTCCCTGACACTCAG...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS TCA 90 bp TGCAGCCAGCCCTGCAGCGGTTTGGACCATGTCTGGTGTCCTGGCTaGAGAGCACAAGTGGACCAAGTGCATGGTGTCTCCACCCAGTGG +
Preference number: 5 (lower is better)
Translates to: CSQPCSGLDHVWCPG*RAQVDQVHGVSTQW
Trigger: CCACTGGGTGGAGACACCATGCACTTGGTCCACTTGTGCTCTTCAGCCAGGACACCAGACATGGTCCAAACCGCTGCAGGGCTGGCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CAA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCACCTCGCCAGTGCTGTaGGGCGTCATCTTGGTCCTG +
Preference number: 5 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGTSPVL*GVILVL
Trigger: CAGGACCAAGATGACGCCCAACAGCACTGGCGAGGT...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CAA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCACTGCTTTGGCTGCTaGGGTGGTAGGCAATGCTGG +
Preference number: 5 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGHCFGC*GGRQCW
Trigger: CCAGCATTGCCTACCACCCAAGCAGCCAAAGCAGTG...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CAA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCCAGCCCTGCAGCGGTTaGGACCATGTCTGGTGTCCT +
Preference number: 5 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGQPCSG*DHVWCP
Trigger: AGGACACCAGACATGGTCCAAACCGCTGCAGGGCTG...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CAA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCCCTGGGAGATGGCTGTaGGGAGCAGGTATTGCCTGC +
Preference number: 5 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGPGRWL*GAGIAC
Trigger: GCAGGCAATACCTGCTCCCAACAGCCATCTCCCAGG...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522678.5
CDS GCA 90 bp GGAGTCAGCAGAGGCCCTTCCTTTAGTTCAAGTCCAGGTCGACACTaGTTTGGCTGCTTGGGTGGTAGGCAATGCTGGGGCCGGGACTGT +
Preference number: 5 (lower is better)
Translates to: GVSRGPSFSSSPGRH*FGCLGGRQCWGRDC
Trigger: ACAGTCCCGGCCCCAGCATTGCCTACCACCCAAGCAGCCAAAGCAGTGTCGACCTGGACTTGAACTAAAGGAAGGGCCTCTGCTGACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS GCA 90 bp TGTGGGCTGTATCATGTTCGATGGCTGTTGGGAGCAGGTATTGCCTaGCCAGCCTGGGCCTTCCTGAGTGTCAGGGAGTTGCTGCAGCCA +
Preference number: 5 (lower is better)
Translates to: CGLYHVRWLLGAGIA*PAWAFLSVRELLQP
Trigger: TGGCTGCAGCAACTCCCTGACACTCAGGAAGGCCCAGGCTGGGCAGGCAATACCTGCTCCCAACAGCCATCGAACATGATACAGCCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521462.1
CDS CCA 90 bp TTGCTGCAGCCAGCCCTGCAGCGGTTTGGACCATGTCTGGTGTCCTaGCTGAAGAGCACAAGTGGACCAAGTGCATGGTGTCTCCACCCA +
Preference number: 5 (lower is better)
Translates to: LLQPALQRFGPCLVS*LKSTSGPSAWCLHP
Trigger: TGGGTGGAGACACCATGCACTTGGTCCACTTGTGCTCTTCAGCCAGGACACCAGACATGGTCCAAACCGCTGCAGGGCTGGCTGCAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS-3UTR CAA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCGGGAACAGGCGGAAATaGCAGCAGGAAAGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGGNRRK*QQESWD
Trigger: GTCCCAGCTTTCCTGCTGCAATTTCCGCCTGTTCCC...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS-3UTR CAA 90 bp AGACAGGCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCATGTTCGATGGCTGTaGGGAGCAGGTATTGCCTGC +
Preference number: 5 (lower is better)
Translates to: RQAGWLSWTDALVGVSRGHVRWL*GAGIAC
Trigger: GCAGGCAATACCTGCTCCCAACAGCCATCGAACATG...GCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGCCTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521462.1
CDS-3UTR CAA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCGACATTAGGAAACACTaGCTGGCTGAAGAGCGCAAG +
Preference number: 5 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSDIRKH*LAEERK
Trigger: CTTGCGCTCTTCAGCCAGCAAGTGTTTCCTAATGTC...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS-3UTR CAA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCGCTTTGATTTCCACCTaGTATCAAGTGCGGCTTTGG +
Preference number: 5 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSALIST*YQVRLW
Trigger: CCAAAGCCGCACTTGATACAAGGTGGAAATCAAAGC...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS-3UTR CAA 90 bp GCTGGATGGCTGAGCTGGACGGATGCTCTGGTAGGAGTCAGCAGAGGCCCTTCCAGGAAACCAGATACATaGAGAGGGAAGGGCAAGTTC +
Preference number: 5 (lower is better)
Translates to: AGWLSWTDALVGVSRGPSRKPDT*RGKGKF
Trigger: GAACTTGCCCTTCCCTCTCAATGTATCTGGTTTCCT...GGAAGGGCCTCTGCTGACTCCTACCAGAGCATCCGTCCAGCTCAGCCATCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS CCA 90 bp CGTGGAGTGTGGCTGTGCCAGCTCTGCACAGCCAGTCAGGGATCCTaGAGATCAGGGACTTCTGTTGGGACAAAAAGTGGGAAGAGGAAA +
Preference number: 5 (lower is better)
Translates to: RGVWLCQLCTASQGS*RSGTSVGTKSGKRK
Trigger: TTTCCTCTTCCCACTTTTTGTCCCAACAGAAGTCCCTGATCTCCAGGATCCCTGACTGGCTGTGCAGAGCTGGCACAGCCACACTCCACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS TCA 90 bp AGAGGGAAGGGCAAGTTCAAGGCTGGGAAGCCAGAAGTGGTGCTTTaGTTTCCACCTTGTATCAAGTGCGGCTTTGGAGTGAGGGGGAGG +
Preference number: 5 (lower is better)
Translates to: RGKGKFKAGKPEVVL*FPPCIKCGFGVRGR
Trigger: CCTCCCCCTCACTCCAAAGCCGCACTTGATACAAGGTGGAAATCAAAGCACCACTTCTGGCTTCCCAGCCTTGAACTTGCCCTTCCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS CCA 90 bp GGTGAGACATTAGGAAACACTTGCTGGCTGAAGAGCGCAAGTAAATaGAGCAAAGGGACTCTGGTGCTCTCCGGGAGAGCTGGGCCTGAA +
Preference number: 5 (lower is better)
Translates to: GETLGNTCWLKSASK*SKGTLVLSGRAGPE
Trigger: TTCAGGCCCAGCTCTCCCGGAGAGCACCAGAGTCCCTTTGCTCCATTTACTTGCGCTCTTCAGCCAGCAAGTGTTTCCTAATGTCTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS-3UTR CAA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCAAACTTGACTCGTCTTaGCTCCACACTAGCAACAGG +
Preference number: 5 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGKLDSS*LHTSNR
Trigger: CCTGTTGCTAGTGTGGAGCAAAGACGAGTCAAGTTT...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522678.5
CDS-3UTR CAA 90 bp TCAAACAGAGGCAGGGTCTCTGATCCAGAGAAGTGGGGCCCGGTAGAGACAGGCTTCCAGCCCATAAACTaGACTCGTCTTTGCTCCACA +
Preference number: 5 (lower is better)
Translates to: SNRGRVSDPEKWGPVETGFQPIN*TRLCST
Trigger: TGTGGAGCAAAGACGAGTCAAGTTTATGGGCTGGAA...GCCTGTCTCTACCGGGCCCCACTTCTCTGGATCAGAGACCCTGCCTCTGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522678.5
CDS GCA 90 bp TGCAGCAGGAAAGCTGGGACTGGGGGTGAGACATTAGGAAACACTTaGTGGCTGAAGAGCGCAAGTAAATGGAGCAAAGGGACTCTGGTG +
Preference number: 5 (lower is better)
Translates to: CSRKAGTGGETLGNT*WLKSASKWSKGTLV
Trigger: CACCAGAGTCCCTTTGCTCCATTTACTTGCGCTCTTCAGCCAGCAAGTGTTTCCTAATGTCTCACCCCCAGTCCCAGCTTTCCTGCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS CCA 90 bp GCTCTGCACAGCCAGTCAGGGATCCTGGAGATCAGGGACTTCTGTTaGGACAAAAAGTGGGAAGAGGAAAGCATCCAGCCTCAAGTCCAT +
Preference number: 5 (lower is better)
Translates to: ALHSQSGILEIRDFC*DKKWEEESIQPQVH
Trigger: ATGGACTTGAGGCTGGATGCTTTCCTCTTCCCACTTTTTGTCCCAACAGAAGTCCCTGATCTCCAGGATCCCTGACTGGCTGTGCAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS CCA 90 bp AGCAGGAAAGCTGGGACTGGGGGTGAGACATTAGGAAACACTTGCTaGCTGAAGAGCGCAAGTAAATGGAGCAAAGGGACTCTGGTGCTC +
Preference number: 5 (lower is better)
Translates to: SRKAGTGGETLGNTC*LKSASKWSKGTLVL
Trigger: GAGCACCAGAGTCCCTTTGCTCCATTTACTTGCGCTCTTCAGCCAGCAAGTGTTTCCTAATGTCTCACCCCCAGTCCCAGCTTTCCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS CCA 90 bp CTGGCAGGGCAGCATGTTAATCCAGGGGCGCAGACCCGCAGGCTGTaGGCTGTATCATGTTCGCTGATACACAGAATTTTTCAATTAATT +
Preference number: 5 (lower is better)
Translates to: LAGQHVNPGAQTRRL*AVSCSLIHRIFQLI
Trigger: AATTAATTGAAAAATTCTGTGTATCAGCGAACATGATACAGCCCACAGCCTGCGGGTCTGCGCCCCTGGATTAACATGCTGCCCTGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522678.5
CDS GCA 72 bp GGCCCGGGCCAGGGCGGAGGGCTCATCGCGGCACACTaGCCGCTCCAGCCGGCAGATGTCCTGCAGCTGGCG +
Preference number: 6 (lower is better)
Translates to: GPGQGGGLIAAH*PLQPADVLQLA
Trigger: CGCCAGCTGCAGGACATCTGCCGGCTGGAGCGGGCAGTGTGCCGCGATGAGCCCTCCGCCCTGGCCCGGGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS GCA 72 bp CAGCCCGAAGAGCAGCATGGCTCCAGCCTGTGCCCTTaGCTGCCTCCAGGTAAGGGCCCGGGCCAGGGCGGA +
Preference number: 6 (lower is better)
Translates to: QPEEQHGSSLCP*LPPGKGPGQGG
Trigger: TCCGCCCTGGCCCGGGCCCTTACCTGGAGGCAGGCAAGGGCACAGGCTGGAGCCATGCTGCTCTTCGGGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS CCA 72 bp CACACTGCCCGCTCCAGCCGGCAGATGTCCTGCAGCTaGCGGTGGGCAGTGGCCAGCACGCGGACAGAGAGG +
Preference number: 6 (lower is better)
Translates to: HTARSSRQMSCS*RWAVASTRTER
Trigger: CCTCTCTGTCCGCGTGCTGGCCACTGCCCACCGCCAGCTGCAGGACATCTGCCGGCTGGAGCGGGCAGTGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS CCA 72 bp CCAGGGCCAGGGAGAGCCCCAAAGCCCCCTTGGGAATaGGGCTGGGCACCTCGCCAGTGCTGTTGGGCGTCA +
Preference number: 6 (lower is better)
Translates to: PGPGRAPKPPWE*GWAPRQCCWAS
Trigger: TGACGCCCAACAGCACTGGCGAGGTGCCCAGCCCCATTCCCAAGGGGGCTTTGGGGCTCTCCCTGGCCCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS CCA 72 bp GAGCAGGGCCAGCCGAATGCTCCCAGGGGGCTGGAGTaGCCTCAGGACTGCCATGTAGCGCTCCCCGTGCAC +
Preference number: 6 (lower is better)
Translates to: EQGQPNAPRGLE*PQDCHVALPVH
Trigger: GTGCACGGGGAGCGCTACATGGCAGTCCTGAGGCCACTCCAGCCCCCTGGGAGCATTCGGCTGGCCCTGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS CCA 72 bp GCACCTCGCCAGTGCTGTTGGGCGTCATCTTGGTCCTaGGGACAGGGGAGTCCTGGAGCGGCAGCCGGCATG +
Preference number: 6 (lower is better)
Translates to: APRQCCWASSWS*GQGSPGAAAGM
Trigger: CATGCCGGCTGCCGCTCCAGGACTCCCCTGTCCCCAGGACCAAGATGACGCCCAACAGCACTGGCGAGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS GCA 72 bp GGTCGACACTGCTTTGGCTGCTTGGGTGGTAGGCAATaGTGGGGCCGGGACTGTCCCGGGAGGCTCTTCCCC +
Preference number: 6 (lower is better)
Translates to: GRHCFGCLGGRQ*WGRDCPGRLFP
Trigger: GGGGAAGAGCCTCCCGGGACAGTCCCGGCCCCAGCATTGCCTACCACCCAAGCAGCCAAAGCAGTGTCGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS CCA 72 bp GGCGCTGCTCATAGGCCAGGACTGAGAGGAGCAGTGTaGCCACGTAGGGCCCCCAGCACAGCCCGAAGAGCA +
Preference number: 6 (lower is better)
Translates to: GAAHRPGLRGAV*PRRAPSTARRA
Trigger: TGCTCTTCGGGCTGTGCTGGGGGCCCTACGTGGCCACACTGCTCCTCTCAGTCCTGGCCTATGAGCAGCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS CCA 72 bp CGCCCAGCCCCATGGCTACGGGCACTGCCGCTGCACTaGCACTTCCTAGGGAGAGGAGGGACAACAGTGTCC +
Preference number: 6 (lower is better)
Translates to: RPAPWLRALPLH*HFLGRGGTTVS
Trigger: GGACACTGTTGTCCCTCCTCTCCCTAGGAAGTGCCAGTGCAGCGGCAGTGCCCGTAGCCATGGGGCTGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS CCA 72 bp TCCAGGGGGCTGTGTAGCGCTGATCGCCCAGCCCCATaGCTACGGGCACTGCCGCTGCACTGGCACTTCCTA +
Preference number: 6 (lower is better)
Translates to: SRGLCSADRPAP*LRALPLHWHFL
Trigger: TAGGAAGTGCCAGTGCAGCGGCAGTGCCCGTAGCCATGGGGCTGGGCGATCAGCGCTACACAGCCCCCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS TCA 72 bp GGCTGGTGTGTAGTGGTCTTCCAGCCAGCCATTAGGTaGCAGGCTCCAGCGGGCCAGGTCTCGGGCACCCTG +
Preference number: 6 (lower is better)
Translates to: GWCVVVFQPAIR*QAPAGQVSGTL
Trigger: CAGGGTGCCCGAGACCTGGCCCGCTGGAGCCTGTCACCTAATGGCTGGCTGGAAGACCACTACACACCAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522678.5
CDS CCA 72 bp AGCATCCAGCCTCAAGTCCATCCTCGAGGGAGCTGGTaGGTCGGAAGGACGCAGGGTTCCAGGGCCGGTCCT +
Preference number: 6 (lower is better)
Translates to: SIQPQVHPRGSW*VGRTQGSRAGP
Trigger: AGGACCGGCCCTGGAACCCTGCGTCCTTCCGACCCACCAGCTCCCTCGAGGATGGACTTGAGGCTGGATGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS CCA 72 bp GGACCAGTAACCCCGGCGACTCTGGTTCCACAGCCCTaGCAATGTGGGCAATGCCAGACCCGTGAGCAGCCC +
Preference number: 6 (lower is better)
Translates to: GPVTPATLVPQP*QCGQCQTREQP
Trigger: GGGCTGCTCACGGGTCTGGCATTGCCCACATTGCCAGGGCTGTGGAACCAGAGTCGCCGGGGTTACTGGTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS CCA 72 bp CGACACTGCTTTGGCTGCTTGGGTGGTAGGCAATGCTaGGGCCGGGACTGTCCCGGGAGGCTCTTCCCCACA +
Preference number: 6 (lower is better)
Translates to: RHCFGCLGGRQC*GRDCPGRLFPT
Trigger: TGTGGGGAAGAGCCTCCCGGGACAGTCCCGGCCCCAGCATTGCCTACCACCCAAGCAGCCAAAGCAGTGTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS CCA 72 bp GCACAAGTGGACCAAGTGCATGGTGTCTCCACCCAGTaGGGACAGCGGGGCCAGGCTCTCCTACCCAGGCTC +
Preference number: 6 (lower is better)
Translates to: AQVDQVHGVSTQ*GQRGQALLPRL
Trigger: GAGCCTGGGTAGGAGAGCCTGGCCCCGCTGTCCCCACTGGGTGGAGACACCATGCACTTGGTCCACTTGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519574.2
ENST00000522678.5
CDS CCA 72 bp GAAAGCATCCAGCCTCAAGTCCATCCTCGAGGGAGCTaGTGGGTCGGAAGGACGCAGGGTTCCAGGGCCGGT +
Preference number: 6 (lower is better)
Translates to: ESIQPQVHPRGS*WVGRTQGSRAG
Trigger: ACCGGCCCTGGAACCCTGCGTCCTTCCGACCCACCAGCTCCCTCGAGGATGGACTTGAGGCTGGATGCTTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS CCA 72 bp GTGTCCTGGCTGAAGAGCACAAGTGGACCAAGTGCATaGTGTCTCCACCCAGTGGGGACAGCGGGGCCAGGC +
Preference number: 6 (lower is better)
Translates to: VSWLKSTSGPSA*CLHPVGTAGPG
Trigger: GCCTGGCCCCGCTGTCCCCACTGGGTGGAGACACCATGCACTTGGTCCACTTGTGCTCTTCAGCCAGGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS CAA 90 bp GCAGGTATTGCCTGCCCAGCCTGGGCCTTCCTGAGTGTCAGGGAGTaGCTGCAGCCAGCCCTGCAGCGGTTTGGACCATGTCTGGTGTCC +
Preference number: 6 (lower is better)
Translates to: AGIACPAWAFLSVRE*LQPALQRFGPCLVS
Trigger: GGACACCAGACATGGTCCAAACCGCTGCAGGGCTGGCTGCAGCAACTCCCTGACACTCAGGAAGGCCCAGGCTGGGCAGGCAATACCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS CAA 90 bp GGCCCTTCCTTTAGTTCAAGTCCAGGTCGACACTGCTTTGGCTGCTaGGGTGGTAGGCAATGCTGGGGCCGGGACTGTCCCGGGAGGCTC +
Preference number: 6 (lower is better)
Translates to: GPSFSSSPGRHCFGC*GGRQCWGRDCPGRL
Trigger: GAGCCTCCCGGGACAGTCCCGGCCCCAGCATTGCCTACCACCCAAGCAGCCAAAGCAGTGTCGACCTGGACTTGAACTAAAGGAAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS TCA 72 bp TCCACAGCCCTGGCAATGTGGGCAATGCCAGACCCGTaGGCAGCCCAGCCAGCAGTAGGCTCAGGAAGAAGC +
Preference number: 6 (lower is better)
Translates to: STALAMWAMPDP*AAQPAVGSGRS
Trigger: GCTTCTTCCTGAGCCTACTGCTGGCTGGGCTGCTCACGGGTCTGGCATTGCCCACATTGCCAGGGCTGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS GCA 72 bp TCTGGTGTCCTGGCTGAAGAGCACAAGTGGACCAAGTaGATGGTGTCTCCACCCAGTGGGGACAGCGGGGCC +
Preference number: 6 (lower is better)
Translates to: SGVLAEEHKWTK*MVSPPSGDSGA
Trigger: GGCCCCGCTGTCCCCACTGGGTGGAGACACCATGCACTTGGTCCACTTGTGCTCTTCAGCCAGGACACCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS GCA 72 bp CTGTGTGGTAGCAACCAGCCGGAGCTCACTGCTGGCTaGCCTTCGGACAGTCCCCACCCAGCCAGCTTTATC +
Preference number: 6 (lower is better)
Translates to: LCGSNQPELTAG*PSDSPHPASFI
Trigger: GATAAAGCTGGCTGGGTGGGGACTGTCCGAAGGGCAGCCAGCAGTGAGCTCCGGCTGGTTGCTACCACACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522678.5
CDS CCA 72 bp CAGGAGCCCATAGACTTCGAGGTACAGGTAGGGGGCTaGGAAGATAGCCTGGGAGCTGCAGTTGGCACCAGG +
Preference number: 6 (lower is better)
Translates to: QEPIDFEVQVGG*EDSLGAAVGTR
Trigger: CCTGGTGCCAACTGCAGCTCCCAGGCTATCTTCCCAGCCCCCTACCTGTACCTCGAAGTCTATGGGCTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS CAA 90 bp TCAGCAGAGGCCCTTCCTTTAGTTCAAGTCCAGGTCGACACTGCTTaGGCTGCTTGGGTGGTAGGCAATGCTGGGGCCGGGACTGTCCCG +
Preference number: 6 (lower is better)
Translates to: SAEALPLVQVQVDTA*AAWVVGNAGAGTVP
Trigger: CGGGACAGTCCCGGCCCCAGCATTGCCTACCACCCAAGCAGCCAAAGCAGTGTCGACCTGGACTTGAACTAAAGGAAGGGCCTCTGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS CCA 72 bp CAGCATGTTAATCCAGGGGCGCAGACCCGCAGGCTGTaGGCTGTATCATGTTCGATGGCTGTTGGGAGCAGG +
Preference number: 6 (lower is better)
Translates to: QHVNPGAQTRRL*AVSCSMAVGSR
Trigger: CCTGCTCCCAACAGCCATCGAACATGATACAGCCCACAGCCTGCGGGTCTGCGCCCCTGGATTAACATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521462.1
CDS TCA 72 bp GGGAGGAGAGAAGCCCAGCCACACTCCCTTAAGGCCTaGAATGGGAGGGAACAGGCGGAAATTGCAGCAGGA +
Preference number: 6 (lower is better)
Translates to: GRREAQPHSLKA*NGREQAEIAAG
Trigger: TCCTGCTGCAATTTCCGCCTGTTCCCTCCCATTTCAGGCCTTAAGGGAGTGTGGCTGGGCTTCTCTCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS TCA 72 bp CCCTGCAGCGGTTTGGACCATGTCTGGTGTCCTGGCTaGAGAGCACAAGTGGACCAAGTGCATGGTGTCTCC +
Preference number: 6 (lower is better)
Translates to: PCSGLDHVWCPG*RAQVDQVHGVS
Trigger: GGAGACACCATGCACTTGGTCCACTTGTGCTCTTCAGCCAGGACACCAGACATGGTCCAAACCGCTGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS CCA 72 bp CCAGCCCTGCAGCGGTTTGGACCATGTCTGGTGTCCTaGCTGAAGAGCACAAGTGGACCAAGTGCATGGTGT +
Preference number: 6 (lower is better)
Translates to: PALQRFGPCLVS*LKSTSGPSAWC
Trigger: ACACCATGCACTTGGTCCACTTGTGCTCTTCAGCCAGGACACCAGACATGGTCCAAACCGCTGCAGGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS GCA 72 bp TCCTTTAGTTCAAGTCCAGGTCGACACTGCTTTGGCTaGTTGGGTGGTAGGCAATGCTGGGGCCGGGACTGT +
Preference number: 6 (lower is better)
Translates to: SFSSSPGRHCFG*LGGRQCWGRDC
Trigger: ACAGTCCCGGCCCCAGCATTGCCTACCACCCAAGCAGCCAAAGCAGTGTCGACCTGGACTTGAACTAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS GCA 72 bp AGAGGCCCTTCCTTTAGTTCAAGTCCAGGTCGACACTaGTTTGGCTGCTTGGGTGGTAGGCAATGCTGGGGC +
Preference number: 6 (lower is better)
Translates to: RGPSFSSSPGRH*FGCLGGRQCWG
Trigger: GCCCCAGCATTGCCTACCACCCAAGCAGCCAAAGCAGTGTCGACCTGGACTTGAACTAAAGGAAGGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479077.5
ENST00000519574.2
ENST00000521462.1
ENST00000522678.5
CDS CCA 72 bp TGGCTGTGCCAGCTCTGCACAGCCAGTCAGGGATCCTaGAGATCAGGGACTTCTGTTGGGACAAAAAGTGGG +
Preference number: 6 (lower is better)
Translates to: WLCQLCTASQGS*RSGTSVGTKSG
Trigger: CCCACTTTTTGTCCCAACAGAAGTCCCTGATCTCCAGGATCCCTGACTGGCTGTGCAGAGCTGGCACAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS CCA 72 bp ATGAAGTCCCGTGTGATGAGGACTCAGATCAACACTTaGCCCTTCAGCACTCCGCGACAGGCAGCGATCGCT +
Preference number: 6 (lower is better)
Translates to: MKSRVMRTQINT*PFSTPRQAAIA
Trigger: AGCGATCGCTGCCTGTCGCGGAGTGCTGAAGGGCCAAGTGTTGATCTGAGTCCTCATCACACGGGACTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS CAA 72 bp AATGAAGTCCCGTGTGATGAGGACTCAGATCAACACTaGGCCCTTCAGCACTCCGCGACAGGCAGCGATCGC +
Preference number: 6 (lower is better)
Translates to: NEVPCDEDSDQH*ALQHSATGSDR
Trigger: GCGATCGCTGCCTGTCGCGGAGTGCTGAAGGGCCAAGTGTTGATCTGAGTCCTCATCACACGGGACTTCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS CAA 90 bp AGCAGCCTCCGGGTAGGACTTCCAGCCCATAAACTTGACTCGTCTTaGCTCCACACTAGCAACAGGGTCCTTCCTGGGAGATGGCTGTTG +
Preference number: 6 (lower is better)
Translates to: SSLRVGLPAHKLDSS*LHTSNRVLPGRWLL
Trigger: CAACAGCCATCTCCCAGGAAGGACCCTGTTGCTAGTGTGGAGCAAAGACGAGTCAAGTTTATGGGCTGGAAGTCCTACCCGGAGGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522678.5
CDS TCA 72 bp AGGCGGAAATTGCAGCAGGAAAGCTGGGACTGGGGGTaGGACATTAGGAAACACTTGCTGGCTGAAGAGCGC +
Preference number: 6 (lower is better)
Translates to: RRKLQQESWDWG*DIRKHLLAEER
Trigger: GCGCTCTTCAGCCAGCAAGTGTTTCCTAATGTCTCACCCCCAGTCCCAGCTTTCCTGCTGCAATTTCCGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS CAA 72 bp GGCTGGGAAGCCAGAAGTGGTGCTTTGATTTCCACCTaGTATCAAGTGCGGCTTTGGAGTGAGGGGGAGGAG +
Preference number: 6 (lower is better)
Translates to: GWEARSGALIST*YQVRLWSEGEE
Trigger: CTCCTCCCCCTCACTCCAAAGCCGCACTTGATACAAGGTGGAAATCAAAGCACCACTTCTGGCTTCCCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS CAA 90 bp GTGAGACTAAATGAAGTCCCGTGTGATGAGGACTCAGATCAACACTaGGCCCTTCAGCACTCCGCGACAGGCAGCGATCGCTGGGAACAT +
Preference number: 6 (lower is better)
Translates to: VRLNEVPCDEDSDQH*ALQHSATGSDRWEH
Trigger: ATGTTCCCAGCGATCGCTGCCTGTCGCGGAGTGCTGAAGGGCCAAGTGTTGATCTGAGTCCTCATCACACGGGACTTCATTTAGTCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS CAA 72 bp CGGGTAGGACTTCCAGCCCATAAACTTGACTCGTCTTaGCTCCACACTAGCAACAGGGTCCTTCCTGGGAGA +
Preference number: 6 (lower is better)
Translates to: RVGLPAHKLDSS*LHTSNRVLPGR
Trigger: TCTCCCAGGAAGGACCCTGTTGCTAGTGTGGAGCAAAGACGAGTCAAGTTTATGGGCTGGAAGTCCTACCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522678.5
CDS CAA 90 bp CAAGTTCAAGGCTGGGAAGCCAGAAGTGGTGCTTTGATTTCCACCTaGTATCAAGTGCGGCTTTGGAGTGAGGGGGAGGAGAGAAGCCCA +
Preference number: 6 (lower is better)
Translates to: QVQGWEARSGALIST*YQVRLWSEGEERSP
Trigger: TGGGCTTCTCTCCTCCCCCTCACTCCAAAGCCGCACTTGATACAAGGTGGAAATCAAAGCACCACTTCTGGCTTCCCAGCCTTGAACTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS TCA 72 bp GGCAAGTTCAAGGCTGGGAAGCCAGAAGTGGTGCTTTaGTTTCCACCTTGTATCAAGTGCGGCTTTGGAGTG +
Preference number: 6 (lower is better)
Translates to: GKFKAGKPEVVL*FPPCIKCGFGV
Trigger: CACTCCAAAGCCGCACTTGATACAAGGTGGAAATCAAAGCACCACTTCTGGCTTCCCAGCCTTGAACTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS GCA 72 bp AAAGCTGGGACTGGGGGTGAGACATTAGGAAACACTTaGTGGCTGAAGAGCGCAAGTAAATGGAGCAAAGGG +
Preference number: 6 (lower is better)
Translates to: KAGTGGETLGNT*WLKSASKWSKG
Trigger: CCCTTTGCTCCATTTACTTGCGCTCTTCAGCCAGCAAGTGTTTCCTAATGTCTCACCCCCAGTCCCAGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS GCA 72 bp GGAAGGGCAAGTTCAAGGCTGGGAAGCCAGAAGTGGTaGTTTGATTTCCACCTTGTATCAAGTGCGGCTTTG +
Preference number: 6 (lower is better)
Translates to: GRASSRLGSQKW*FDFHLVSSAAL
Trigger: CAAAGCCGCACTTGATACAAGGTGGAAATCAAAGCACCACTTCTGGCTTCCCAGCCTTGAACTTGCCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479077.5
CDS CCA 72 bp CAGCATGTTAATCCAGGGGCGCAGACCCGCAGGCTGTaGGCTGTATCATGTTCGCTGATACACAGAATTTTT +
Preference number: 6 (lower is better)
Translates to: QHVNPGAQTRRL*AVSCSLIHRIF
Trigger: AAAAATTCTGTGTATCAGCGAACATGATACAGCCCACAGCCTGCGGGTCTGCGCCCCTGGATTAACATGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522678.5