RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPATCH2L (Homo sapiens)

Ensembl gene IDs: ENSG00000089916

Ensembl transcript IDs: ENST00000261530.12, ENST00000312858.9, ENST00000553588.1, ENST00000554125.5, ENST00000554375.5, ENST00000554799.1, ENST00000556109.1, ENST00000556372.2, ENST00000556663.5, ENST00000556675.2, ENST00000557207.1, ENST00000557263.5, ENST00000557542.5, ENST00000621494.1

Found 1093 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGTGGCTTTCTCTGCTGCAGAGGTCCTCACCAACCACTCAGAGCTaGGTGATTTGGGGGCTTGTGATGCTGGTGTGGTTGGCTCCACTG +
Preference number: 1 (lower is better)
Translates to: LWLSLLQRSSPTTQS*VIWGLVMLVWLAPL
Trigger: CAGTGGAGCCAACCACACCAGCATCACAAGCCCCCAAATCACCCAGCTCTGAGTGGTTGGTGAGGACCTCTGCAGCAGAGAAAGCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554375.5
3UTR CCA 90 bp TCTCTGCTGCAGAGGTCCTCACCAACCACTCAGAGCTGGGTGATTTaGGGGCTTGTGATGCTGGTGTGGTTGGCTCCACTGCATCCATGT +
Preference number: 1 (lower is better)
Translates to: SLLQRSSPTTQSWVI*GLVMLVWLAPLHPC
Trigger: ACATGGATGCAGTGGAGCCAACCACACCAGCATCACAAGCCCCCAAATCACCCAGCTCTGAGTGGTTGGTGAGGACCTCTGCAGCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554375.5
3UTR GCA 90 bp ATGACGTCCTCCAAGCCATGCCTCCAACTAGACTGCATCCACAGCTaGTACAGTAAGCCACTCTGCTCTCAGCCCAGCTCAGATAGGTTC +
Preference number: 1 (lower is better)
Translates to: MTSSKPCLQLDCIHS*YSKPLCSQPSSDRF
Trigger: GAACCTATCTGAGCTGGGCTGAGAGCAGAGTGGCTTACTGTAGCAGCTGTGGATGCAGTCTAGTTGGAGGCATGGCTTGGAGGACGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR TCA 90 bp CAAAGATGCTGTGGCCACTGGTTTCCGCTTCCTCTTGATGTCACGTaGACATGGTGGTCCCCAGTGTACATTTGCCTGTCTGGCAGAGCA +
Preference number: 1 (lower is better)
Translates to: QRCCGHWFPLPLDVT*TWWSPVYICLSGRA
Trigger: TGCTCTGCCAGACAGGCAAATGTACACTGGGGACCACCATGTTCACGTGACATCAAGAGGAAGCGGAAACCAGTGGCCACAGCATCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554375.5
3UTR GCA 90 bp GGCAGCTCAAGCACTAGCAGAGGGAAGCAGCTGACAAGAGCTAACTaGTTTTACCATCCCTCCAACCATCGCATGAACCATGACGTCCTC +
Preference number: 1 (lower is better)
Translates to: GSSSTSRGKQLTRAN*FYHPSNHRMNHDVL
Trigger: GAGGACGTCATGGTTCATGCGATGGTTGGAGGGATGGTAAAAGCAGTTAGCTCTTGTCAGCTGCTTCCCTCTGCTAGTGCTTGAGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CCA 90 bp AATCAATCATGCATCACCACCAGGAGCCTTCGCCTGGAGCCAAAGTaGAGAACCCATCGCATCAGCAATGACTGTGCCAGCCTAGTTCCT +
Preference number: 1 (lower is better)
Translates to: NQSCITTRSLRLEPK*RTHRISNDCASLVP
Trigger: AGGAACTAGGCTGGCACAGTCATTGCTGATGCGATGGGTTCTCCACTTTGGCTCCAGGCGAAGGCTCCTGGTGGTGATGCATGATTGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CCA 90 bp AGAGCCCCTGAGAATGTGAAGAGGGGGCTCTGTGTCAGGCTAACATaGAACACCAGAGGGAATAAATCGCCACTGCTCACATTCCCTGAG +
Preference number: 1 (lower is better)
Translates to: RAPENVKRGLCVRLT*NTRGNKSPLLTFPE
Trigger: CTCAGGGAATGTGAGCAGTGGCGATTTATTCCCTCTGGTGTTCCATGTTAGCCTGACACAGAGCCCCCTCTTCACATTCTCAGGGGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261530.12
3UTR TCA 90 bp TTAAGGTGGTATGGCAAAGGAACTCACTGGCATACAGGTGTTCACTaGAATAACGGAGGTGGCGGCAGAGACCGGCATCCAGTCTGTGCT +
Preference number: 1 (lower is better)
Translates to: LRWYGKGTHWHTGVH*NNGGGGRDRHPVCA
Trigger: AGCACAGACTGGATGCCGGTCTCTGCCGCCACCTCCGTTATTTCAGTGAACACCTGTATGCCAGTGAGTTCCTTTGCCATACCACCTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR GCA 90 bp TGCCTCCAACTAGACTGCATCCACAGCTGCTACAGTAAGCCACTCTaGTCTCAGCCCAGCTCAGATAGGTTCACAAGACATATAGGGCAC +
Preference number: 1 (lower is better)
Translates to: CLQLDCIHSCYSKPL*SQPSSDRFTRHIGH
Trigger: GTGCCCTATATGTCTTGTGAACCTATCTGAGCTGGGCTGAGAGCAGAGTGGCTTACTGTAGCAGCTGTGGATGCAGTCTAGTTGGAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CCA 90 bp CAAAGACCTGAAATCAATCATGCATCACCACCAGGAGCCTTCGCCTaGAGCCAAAGTGGAGAACCCATCGCATCAGCAATGACTGTGCCA +
Preference number: 1 (lower is better)
Translates to: QRPEINHASPPGAFA*SQSGEPIASAMTVP
Trigger: TGGCACAGTCATTGCTGATGCGATGGGTTCTCCACTTTGGCTCCAGGCGAAGGCTCCTGGTGGTGATGCATGATTGATTTCAGGTCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR TCA 90 bp GAGCCTTCGCCTGGAGCCAAAGTGGAGAACCCATCGCATCAGCAATaGCTGTGCCAGCCTAGTTCCTTTGTCTCAACACTCTGTATCTTT +
Preference number: 1 (lower is better)
Translates to: EPSPGAKVENPSHQQ*LCQPSSFVSTLCIF
Trigger: AAAGATACAGAGTGTTGAGACAAAGGAACTAGGCTGGCACAGTCATTGCTGATGCGATGGGTTCTCCACTTTGGCTCCAGGCGAAGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CCA 90 bp CAGGACAAACAAGTCAATAAAGAGGTCTCATCAGACACTGGCCCATaGCCCAGTGGCCCACAGCTTATGCATATGTACATGCCCTCCAAC +
Preference number: 1 (lower is better)
Translates to: QDKQVNKEVSSDTGP*PSGPQLMHMYMPSN
Trigger: GTTGGAGGGCATGTACATATGCATAAGCTGTGGGCCACTGGGCCATGGGCCAGTGTCTGATGAGACCTCTTTATTGACTTGTTTGTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR GCA 90 bp CTAATAGTTTCAAGGATAGTATATCTAAGGAGCCCAGGAGTATCCTaGTTTAGGGCAGTTACCCTCTTCCCTAAGAGGTCCCTGAGGAGG +
Preference number: 1 (lower is better)
Translates to: LIVSRIVYLRSPGVS*FRAVTLFPKRSLRR
Trigger: CCTCCTCAGGGACCTCTTAGGGAAGAGGGTAACTGCCCTAAAGCAGGATACTCCTGGGCTCCTTAGATATACTATCCTTGAAACTATTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CCA 90 bp CCCATTCAGCACCTATTTAAGACAGAAAATAAGCAGATGCATGAGTaGGAGTCCCTCTACAATGTGACCAGAGCAGGGAGCACTTCACCA +
Preference number: 1 (lower is better)
Translates to: PIQHLFKTENKQMHE*ESLYNVTRAGSTSP
Trigger: TGGTGAAGTGCTCCCTGCTCTGGTCACATTGTAGAGGGACTCCCACTCATGCATCTGCTTATTTTCTGTCTTAAATAGGTGCTGAATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR TCA 90 bp TGCTCTCAGCCCAGCTCAGATAGGTTCACAAGACATATAGGGCACTaGACACAGCTTCTAACGCTGAGATTTTTACATAGTCTTCTCCCC +
Preference number: 1 (lower is better)
Translates to: CSQPSSDRFTRHIGH*TQLLTLRFLHSLLP
Trigger: GGGGAGAAGACTATGTAAAAATCTCAGCGTTAGAAGCTGTGTTCAGTGCCCTATATGTCTTGTGAACCTATCTGAGCTGGGCTGAGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR GCA 90 bp CTTTCAATCATGTACGCACAGAGAAGGGATGAGCCCATTCACAGTTaGCTGGTAGAGAAACAGCCCACCAGGACAAACAAGTCAATAAAG +
Preference number: 1 (lower is better)
Translates to: LSIMYAQRRDEPIHS*LVEKQPTRTNKSIK
Trigger: CTTTATTGACTTGTTTGTCCTGGTGGGCTGTTTCTCTACCAGGCAACTGTGAATGGGCTCATCCCTTCTCTGTGCGTACATGATTGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR TCA 90 bp AGACAGAAAATAAGCAGATGCATGAGTGGGAGTCCCTCTACAATGTaGCCAGAGCAGGGAGCACTTCACCAAGAGCTTCTATGTATTTCA +
Preference number: 1 (lower is better)
Translates to: RQKISRCMSGSPSTM*PEQGALHQELLCIS
Trigger: TGAAATACATAGAAGCTCTTGGTGAAGTGCTCCCTGCTCTGGTCACATTGTAGAGGGACTCCCACTCATGCATCTGCTTATTTTCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR TCA 90 bp TTGAGGCCCCAAAACTTGGTTGATTTATCTTATTGGCACTCTGCATaGATCAAGAGTAGGCTCAAAGGCAAGCCTTATCTCCTGCGAACA +
Preference number: 1 (lower is better)
Translates to: LRPQNLVDLSYWHSA*IKSRLKGKPYLLRT
Trigger: TGTTCGCAGGAGATAAGGCTTGCCTTTGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTTGGGGCCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
3UTR TCA 90 bp AACACAGGAGAAAGCATCTCTCTACCACTTGCATTTAGTTCTGAGTaGTGGAACTCACCATTTTCCTCACCCTTTCCCTCTGTACCAGTT +
Preference number: 1 (lower is better)
Translates to: NTGESISLPLAFSSE*WNSPFSSPFPSVPV
Trigger: AACTGGTACAGAGGGAAAGGGTGAGGAAAATGGTGAGTTCCATCACTCAGAACTAAATGCAAGTGGTAGAGAGATGCTTTCTCCTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CCA 90 bp AAATCGCCACTGCTCACATTCCCTGAGCTGGCCTCACTTTATCTCTaGCTGGTGAGCTTTTGCTTGGATTCTATAAAATACACGTCTTTA +
Preference number: 1 (lower is better)
Translates to: KSPLLTFPELASLYL*LVSFCLDSIKYTSL
Trigger: TAAAGACGTGTATTTTATAGAATCCAAGCAAAAGCTCACCAGCCAGAGATAAAGTGAGGCCAGCTCAGGGAATGTGAGCAGTGGCGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261530.12
3UTR TCA 90 bp GCATCCAACTTCAGGCACGACTGTATATATAACTCCACATGCAGCTaGGCCATCATAAACACGCCAAGTATAAAGGCATGTCAAAAAGAC +
Preference number: 1 (lower is better)
Translates to: ASNFRHDCIYNSTCS*AIINTPSIKACQKD
Trigger: GTCTTTTTGACATGCCTTTATACTTGGCGTGTTTATGATGGCTCAGCTGCATGTGGAGTTATATATACAGTCGTGCCTGAAGTTGGATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR TCA 90 bp AGAGAAAATCTGAAAGTCTGGGATTCTAGTCCTGGCTTAGTTATGTaGTTTGGAGCAAGTCACTCAACTCTGTGGCTGTTTTCATCTCCT +
Preference number: 1 (lower is better)
Translates to: RENLKVWDSSPGLVM*FGASHSTLWLFSSP
Trigger: AGGAGATGAAAACAGCCACAGAGTTGAGTGACTTGCTCCAAATCACATAACTAAGCCAGGACTAGAATCCCAGACTTTCAGATTTTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR TCA 90 bp TACACCTTTGCAAACACAATGAACTCTTTAGCTATGCATATTCCCTaGAAAGACAGAACTTGGATTTCTGGGCTCTGGCAACCAGTTAGG +
Preference number: 1 (lower is better)
Translates to: YTFANTMNSLAMHIP*KDRTWISGLWQPVR
Trigger: CCTAACTGGTTGCCAGAGCCCAGAAATCCAAGTTCTGTCTTTTCAGGGAATATGCATAGCTAAAGAGTTCATTGTGTTTGCAAAGGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CCA 90 bp ACTTCGCTTCATCAGTGTTCAGTAAATGTTTGTTCAATCAGTGACTaGGGCAATGGTTCTGGTGGACCTTTGTTATTCTTATTGGCTGTC +
Preference number: 1 (lower is better)
Translates to: TSLHQCSVNVCSISD*GNGSGGPLLFLLAV
Trigger: GACAGCCAATAAGAATAACAAAGGTCCACCAGAACCATTGCCCCAGTCACTGATTGAACAAACATTTACTGAACACTGATGAAGCGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR GCA 90 bp ACTCTGCATGAATCAAGAGTAGGCTCAAAGGCAAGCCTTATCTCCTaGGAACACAATTCCATACAGGTCTCAACTCAATATTTAAATTTG +
Preference number: 1 (lower is better)
Translates to: TLHESRVGSKASLIS*EHNSIQVSTQYLNL
Trigger: CAAATTTAAATATTGAGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGGCTTGCCTTTGAGCCTACTCTTGATTCATGCAGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
3UTR TCA 90 bp GATTGGGAACAGACACTCTTTAACATCAGACTTGAATCTGAATCTTaGCTGACACTTAATAGATATGTGACTCGAGCAAGTTTGTCTGTA +
Preference number: 1 (lower is better)
Translates to: DWEQTLFNIRLESES*LTLNRYVTRASLSV
Trigger: TACAGACAAACTTGCTCGAGTCACATATCTATTAAGTGTCAGTCAAGATTCAGATTCAAGTCTGATGTTAAAGAGTGTCTGTTCCCAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR TCA 90 bp TACTGTTTCATAAATAAGCATCTCAGACTGACTCAGGTCTATCACTaGAAAACAAGAGATTATAACCCAGGGCAGAGAAAATCTGAAAGT +
Preference number: 1 (lower is better)
Translates to: YCFINKHLRLTQVYH*KTRDYNPGQRKSES
Trigger: ACTTTCAGATTTTCTCTGCCCTGGGTTATAATCTCTTGTTTTTCAGTGATAGACCTGAGTCAGTCTGAGATGCTTATTTATGAAACAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp GAGCATTGCCAACAGCCCAGAGGGTTTCTTTGTGCCCTCTCTTGGTCACTGCCCCCCTGTGTGACTGCCTaGCTGAACTGCCACTTCACC +
Preference number: 2 (lower is better)
Translates to: EHCQQPRGFLCALSWSLPPCVTA*LNCHFT
Trigger: GGTGAAGTGGCAGTTCAGTCAGGCAGTCACACAGGG...GGGCAGTGACCAAGAGAGGGCACAAAGAAACCCTCTGGGCTGTTGGCAATGCTC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000553588.1
3UTR CAA 90 bp TTCTCTGCTGCAGAGGTCCTCACCAACCACTCAGAGCTGGGTGATTaGGGGGCTTGTGATGCTGGTGTGGTTGGCTCCACTGCATCCATG +
Preference number: 2 (lower is better)
Translates to: FSAAEVLTNHSELGD*GACDAGVVGSTASM
Trigger: CATGGATGCAGTGGAGCCAACCACACCAGCATCACAAGCCCCCAAATCACCCAGCTCTGAGTGGTTGGTGAGGACCTCTGCAGCAGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554375.5
3UTR-3UTR CCA 90 bp GCAGAAAGCCACAGATTAAAGACAGCATTAGGTGGAGGAGCCCCTTTTGGGCACGGGGCAATCGCACTTTaGGGGAAGGAGGTGCTGCCC +
Preference number: 2 (lower is better)
Translates to: AESHRLKTALGGGAPFGHGAIAL*GKEVLP
Trigger: GGGCAGCACCTCCTTCCCCCAAAGTGCGATTGCCCC...GTGCCCAAAAGGGGCTCCTCCACCTAATGCTGTCTTTAATCTGTGGCTTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CAA 90 bp TGGTTCTCAAACTTGAGCATGCACCAAAGACCCCTGGAGGGCTTGTaGAAGACTGCTGGGCCTTGCGCTGGGAGTTTCGGATTCAGTAGG +
Preference number: 2 (lower is better)
Translates to: WFSNLSMHQRPLEGL*KTAGPCAGSFGFSR
Trigger: CCTACTGAATCCGAAACTCCCAGCGCAAGGCCCAGCAGTCTTCAACAAGCCCTCCAGGGGTCTTTGGTGCATGCTCAAGTTTGAGAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp GTCAGCTCCTGGAGGGTGAAGTCCTGCTCTCTAGCTGTATCCAGGGCTCTTTTCGGTGAACACCTTCGGTaGGAAGCATCGGCAAGAACA +
Preference number: 2 (lower is better)
Translates to: VSSWRVKSCSLAVSRALFGEHLR*EASART
Trigger: TGTTCTTGCCGATGCTTCTCACCGAAGGTGTTCACC...GAAAAGAGCCCTGGATACAGCTAGAGAGCAGGACTTCACCCTCCAGGAGCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554375.5
3UTR-3UTR GCA 90 bp CACTGCTGCGTGAGAACCAGAGGCGACTCACAGGTCTGCTGGGCTGGTTTCAGCCAGAAAATAAGCAGATaGATGAGTGGGAGTCCCTCT +
Preference number: 2 (lower is better)
Translates to: HCCVRTRGDSQVCWAGFSQKISR*MSGSPS
Trigger: AGAGGGACTCCCACTCATGCATCTGCTTATTTTCTG...GCTGAAACCAGCCCAGCAGACCTGTGAGTCGCCTCTGGTTCTCACGCAGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CCA 90 bp GCAGAAAGCCACAGATTAAAGACAGCATTAGGTGGAGGAGCCCCTTTTGGGCACCCCGAGGCTGTTATGTaGTGGGGGAGGGCTGAGATT +
Preference number: 2 (lower is better)
Translates to: AESHRLKTALGGGAPFGHPEAVM*WGRAEI
Trigger: AATCTCAGCCCTCCCCCACCACATAACAGCCTCGGG...GTGCCCAAAAGGGGCTCCTCCACCTAATGCTGTCTTTAATCTGTGGCTTTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CAA 90 bp CTATGGTTCTCAAACTTGAGCATGCACCAAAGACCCCTGGAGGGCTaGTTGAAGACTGCTGGGCCTTGCGCTGGGAGTTTCGGATTCAGT +
Preference number: 2 (lower is better)
Translates to: LWFSNLSMHQRPLEG*LKTAGPCAGSFGFS
Trigger: ACTGAATCCGAAACTCCCAGCGCAAGGCCCAGCAGTCTTCAACAAGCCCTCCAGGGGTCTTTGGTGCATGCTCAAGTTTGAGAACCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CAA 90 bp ATTTATCAAGGGAGAGGTCCTAGGGCACAGGAAAAGGGGTTCGTCTaGGGCAGGACAGGCACTGGCAAGAAGGTAAGGAAGCGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: IYQGRGPRAQEKGFV*GRTGTGKKVRKRVC
Trigger: ACACACACGCTTCCTTACCTTCTTGCCAGTGCCTGTCCTGCCCAAGACGAACCCCTTTTCCTGTGCCCTAGGACCTCTCCCTTGATAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CAA 90 bp CTGGGGCTAGACAAAGATGCTGTGGCCACTGGTTTCCGCTTCCTCTaGATGTCACGTGAACATGGTGGTCCCCAGTGTACATTTGCCTGT +
Preference number: 2 (lower is better)
Translates to: LGLDKDAVATGFRFL*MSREHGGPQCTFAC
Trigger: ACAGGCAAATGTACACTGGGGACCACCATGTTCACGTGACATCAAGAGGAAGCGGAAACCAGTGGCCACAGCATCTTTGTCTAGCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554375.5
3UTR-3UTR TCA 90 bp GCCAGGGTTAAAAACCACTGCCTCGGTAGACTGCAGAATGGACAGAGTGCAGATCCTCCAACCATCGCATaGACCATGACGTCCTCCAAG +
Preference number: 2 (lower is better)
Translates to: ARVKNHCLGRLQNGQSADPPTIA*TMTSSK
Trigger: CTTGGAGGACGTCATGGTTCATGCGATGGTTGGAGG...ATCTGCACTCTGTCCATTCTGCAGTCTACCGAGGCAGTGGTTTTTAACCCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR GCA 90 bp GAGCATTGCCAACAGCCCAGAGGGTTTCTTTGTGCCCTCTCTTGGTCACTGCCCATAACCCTGTGTGACTaGCTGACTGAACTGCCACTT +
Preference number: 2 (lower is better)
Translates to: EHCQQPRGFLCALSWSLPITLCD*LTELPL
Trigger: AAGTGGCAGTTCAGTCAGGCAGTCACACAGGGTTAT...GGGCAGTGACCAAGAGAGGGCACAAAGAAACCCTCTGGGCTGTTGGCAATGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553588.1
3UTR-3UTR TCA 90 bp TGGAGGGTGAAGTCCTGCTCTCTAGCTGTATCCAGGGCTCTTTTCTTGTGGCATGGGGAGACAGGGGATTaGACTTCTGCTCCATACGTT +
Preference number: 2 (lower is better)
Translates to: WRVKSCSLAVSRALFLWHGETGD*TSAPYV
Trigger: AACGTATGGAGCAGAAGTTCAATCCCCTGTCTCCCC...ATGCCACAAGAAAAGAGCCCTGGATACAGCTAGAGAGCAGGACTTCACCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554375.5
3UTR-3UTR GCA 90 bp TGGAGGGTGAAGTCCTGCTCTCTAGCTGTATCCAGGGCTCTTTTCTTGTGGCATTCCCCAGTGTACATTTaGCTGTCTGGCAGAGCAGTG +
Preference number: 2 (lower is better)
Translates to: WRVKSCSLAVSRALFLWHSPVYI*LSGRAV
Trigger: CACTGCTCTGCCAGACAGGCAAATGTACACTGGGGA...ATGCCACAAGAAAAGAGCCCTGGATACAGCTAGAGAGCAGGACTTCACCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554375.5
3UTR-3UTR GCA 90 bp TGGAGGGTGAAGTCCTGCTCTCTAGCTGTATCCAGGGCTCTTTTCTTGTGGCATTGTGGCTTTCTCTGCTaGAGAGGTCCTCACCAACCA +
Preference number: 2 (lower is better)
Translates to: WRVKSCSLAVSRALFLWHCGFLC*RGPHQP
Trigger: TGGTTGGTGAGGACCTCTGCAGCAGAGAAAGCCACA...ATGCCACAAGAAAAGAGCCCTGGATACAGCTAGAGAGCAGGACTTCACCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554375.5
3UTR-3UTR CCA 90 bp GCCAGGGTTAAAAACCACTGCCTCGGTAGACTGCAGAATGGACAGAGTGCAGATAATGTGGGAACACCTTaGCCACCTGACCTTTGGAGG +
Preference number: 2 (lower is better)
Translates to: ARVKNHCLGRLQNGQSADNVGTP*PPDLWR
Trigger: CCTCCAAAGGTCAGGTGGCCAAGGTGTTCCCACATT...ATCTGCACTCTGTCCATTCTGCAGTCTACCGAGGCAGTGGTTTTTAACCCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CCA 90 bp GAAAGTGGAACCCCAAGTTTCACTGTATTCATAGGGCTAGTGCTGATGCCCCAAGCAGTGGCCAGATCATaGCTCACTGCACCCTCAACC +
Preference number: 2 (lower is better)
Translates to: ESGTPSFTVFIGLVLMPQAVARS*LTAPST
Trigger: GGTTGAGGGTGCAGTGAGCCATGATCTGGCCACTGC...TTGGGGCATCAGCACTAGCCCTATGAATACAGTGAAACTTGGGGTTCCACTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp CACTGCTGCGTGAGAACCAGAGGCGACTCACAGGTCTGCTGGGCTGGTTTCAGCAGCTGTAGTAAATGTTaGGACAGCAATAACAAGGTA +
Preference number: 2 (lower is better)
Translates to: HCCVRTRGDSQVCWAGFSSCSKC*DSNNKV
Trigger: TACCTTGTTATTGCTGTCTCAACATTTACTACAGCT...GCTGAAACCAGCCCAGCAGACCTGTGAGTCGCCTCTGGTTCTCACGCAGCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCACACACACTGCTGCATaGGAGCCAGGGGTGACTCAG +
Preference number: 2 (lower is better)
Translates to: CKSVHISVPALYAQWASCTHTAA*EPGVTQ
Trigger: CTGAGTCACCCCTGGCTCTCATGCAGCAGTGTGTGT...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCCGCCTGGAGCCAAAGTaGAGAACCCATCGCATCAGC +
Preference number: 2 (lower is better)
Translates to: CKSVHISVPALYAQWASCRLEPK*RTHRIS
Trigger: GCTGATGCGATGGGTTCTCCACTTTGGCTCCAGGCG...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CCA 90 bp GAGCATTGCCAACAGCCCAGAGGGTTTCTTTGTGCCCTCTCTTGGTCACTGCCCAACTGCCACTTCACCTaGACTTTCATTAACATGGAC +
Preference number: 2 (lower is better)
Translates to: EHCQQPRGFLCALSWSLPNCHFT*TFINMD
Trigger: GTCCATGTTAATGAAAGTCCAGGTGAAGTGGCAGTT...GGGCAGTGACCAAGAGAGGGCACAAAGAAACCCTCTGGGCTGTTGGCAATGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553588.1
3UTR-3UTR GCA 90 bp GAAAGTGGAACCCCAAGTTTCACTGTATTCATAGGGCTAGTGCTGATGCCCCAAGACTGCATCCACAGCTaGTACAGTAAGCCACTCTGC +
Preference number: 2 (lower is better)
Translates to: ESGTPSFTVFIGLVLMPQDCIHS*YSKPLC
Trigger: GCAGAGTGGCTTACTGTAGCAGCTGTGGATGCAGTC...TTGGGGCATCAGCACTAGCCCTATGAATACAGTGAAACTTGGGGTTCCACTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CCA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCAGCAGTGGCCAGATCATaGCTCACTGCACCCTCAACC +
Preference number: 2 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSAVARS*LTAPST
Trigger: GGTTGAGGGTGCAGTGAGCCATGATCTGGCCACTGC...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CCA 90 bp GAAAGTGGAACCCCAAGTTTCACTGTATTCATAGGGCTAGTGCTGATGCCCCAATGGATTTCTGGGCTCTaGCAACCAGTTAGGACCCAG +
Preference number: 2 (lower is better)
Translates to: ESGTPSFTVFIGLVLMPQWISGL*QPVRTQ
Trigger: CTGGGTCCTAACTGGTTGCCAGAGCCCAGAAATCCA...TTGGGGCATCAGCACTAGCCCTATGAATACAGTGAAACTTGGGGTTCCACTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp GCCAGGGTTAAAAACCACTGCCTCGGTAGACTGCAGAATGGACAGAGTGCAGATCCTGGCTTAGTTATGTaGTTTGGAGCAAGTCACTCA +
Preference number: 2 (lower is better)
Translates to: ARVKNHCLGRLQNGQSADPGLVM*FGASHS
Trigger: TGAGTGACTTGCTCCAAATCACATAACTAAGCCAGG...ATCTGCACTCTGTCCATTCTGCAGTCTACCGAGGCAGTGGTTTTTAACCCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCACCATCGCATCAGCAATaGCTGTGCCAGCCTAGTTCC +
Preference number: 2 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSPSHQQ*LCQPSS
Trigger: GGAACTAGGCTGGCACAGTCATTGCTGATGCGATGG...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCATTGGGATTATGGGCGTaGGTCACCACACCCAGGCTT +
Preference number: 2 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSLGLWA*VTTPRL
Trigger: AAGCCTGGGTGTGGTGACTCACGCCCATAATCCCAA...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR GCA 90 bp ACTCAGGCTTTCAAAGGGTTGAGGAAAGGTCTTTTGTTTGAAGGAAGGAGTATCGCACACACACACTGCTaGGTGAGAACCAGAGGCGAC +
Preference number: 2 (lower is better)
Translates to: TQAFKGLRKGLLFEGRSIAHTHC*VRTRGD
Trigger: GTCGCCTCTGGTTCTCACGCAGCAGTGTGTGTGTGC...GATACTCCTTCCTTCAAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CCA 90 bp ACACTTCGTATGGGAAACAGGGGCAATCGCACTTTGGGGGAAGGAGGTGCTGCCTGCAGAAGCAGTTACTaGTTTTTCAAGAACAAAGAC +
Preference number: 2 (lower is better)
Translates to: TLRMGNRGNRTLGEGGAACRSSY*FFKNKD
Trigger: GTCTTTGTTCTTGAAAAACCAGTAACTGCTTCTGCA...GGCAGCACCTCCTTCCCCCAAAGTGCGATTGCCCCTGTTTCCCATACGAAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CCA 90 bp GCAGAAAGCCACAGATTAAAGACAGCATTAGGTGGAGGAGCCCCTTTTGGGCACTCATTACACTTCGTATaGGAAACAGGGGCAATCGCA +
Preference number: 2 (lower is better)
Translates to: AESHRLKTALGGGAPFGHSLHFV*ETGAIA
Trigger: TGCGATTGCCCCTGTTTCCCATACGAAGTGTAATGA...GTGCCCAAAAGGGGCTCCTCCACCTAATGCTGTCTTTAATCTGTGGCTTTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CCA 90 bp TGCTCTGAAGTACTGAGATTCAGTCCTAGCAAGAGATTACCAATAACTCAACAGCCAGGAGCCTTCGCCTaGAGCCAAAGTGGAGAACCC +
Preference number: 2 (lower is better)
Translates to: CSEVLRFSPSKRLPITQQPGAFA*SQSGEP
Trigger: GGGTTCTCCACTTTGGCTCCAGGCGAAGGCTCCTGG...CTGTTGAGTTATTGGTAATCTCTTGCTAGGACTGAATCTCAGTACTTCAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CCA 90 bp GCAGAAAGCCACAGATTAAAGACAGCATTAGGTGGAGGAGCCCCTTTTGGGCACCTGTGTTGCATAGGCTaGTCTTCAACTCCTGCAATA +
Preference number: 2 (lower is better)
Translates to: AESHRLKTALGGGAPFGHLCCIG*SSTPAI
Trigger: TATTGCAGGAGTTGAAGACCAGCCTATGCAACACAG...GTGCCCAAAAGGGGCTCCTCCACCTAATGCTGTCTTTAATCTGTGGCTTTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CAA 90 bp ATCAGTGACTGGGGCAATGGTTCTGGTGGACCTTTGTTATTCTTATaGGCTGTCCAGCATCTGAAGTACCTTCCCATGTGTGAGGAAGCT +
Preference number: 2 (lower is better)
Translates to: ISDWGNGSGGPLLFL*AVQHLKYLPMCEEA
Trigger: AGCTTCCTCACACATGGGAAGGTACTTCAGATGCTGGACAGCCAATAAGAATAACAAAGGTCCACCAGAACCATTGCCCCAGTCACTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp TGGAGGTTTTCACTAATAGGCCATGATCATGGGACCAATCACTGCATGAGTCATTCCCACACTACTGCATaGGAACCAGGGGTGGAACAT +
Preference number: 2 (lower is better)
Translates to: WRFSLIGHDHGTNHCMSHSHTTA*EPGVEH
Trigger: ATGTTCCACCCCTGGTTCTCATGCAGTAGTGTGGGA...ATGACTCATGCAGTGATTGGTCCCATGATCATGGCCTATTAGTGAAAACCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGACACACACTGCTGCATaGGAGCCAGGGGTGACTCAG +
Preference number: 2 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVTHTAA*EPGVTQ
Trigger: CTGAGTCACCCCTGGCTCTCATGCAGCAGTGTGTGT...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR GCA 90 bp TGGAGGTTTTCACTAATAGGCCATGATCATGGGACCAATCACTGCATGAGTCATCTATACTTCTACGGGTaGAGCCCACAGGGAAGGGAA +
Preference number: 2 (lower is better)
Translates to: WRFSLIGHDHGTNHCMSHLYFYG*SPQGRE
Trigger: TTCCCTTCCCTGTGGGCTGCACCCGTAGAAGTATAG...ATGACTCATGCAGTGATTGGTCCCATGATCATGGCCTATTAGTGAAAACCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR GCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCTGCCTCCAACTAGACTaGATCCACAGCTGCTACAGT +
Preference number: 2 (lower is better)
Translates to: CKSVHISVPALYAQWASCCLQLD*IHSCYS
Trigger: ACTGTAGCAGCTGTGGATGCAGTCTAGTTGGAGGCA...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CCA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCACATGAGAACCAGGGGTaGAACATCCCTGTGAGCACA +
Preference number: 2 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSHENQG*NIPVST
Trigger: TGTGCTCACAGGGATGTTCCACCCCTGGTTCTCATG...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CCA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCAAATGTGGGAACACCTTaGCCACCTGACCTTTGGAGG +
Preference number: 2 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSNVGTP*PPDLWR
Trigger: CCTCCAAAGGTCAGGTGGCCAAGGTGTTCCCACATT...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCTATGGTTCTCAAACTTaGGCATGCACCAAAGACCCC +
Preference number: 2 (lower is better)
Translates to: CKSVHISVPALYAQWASCYGSQT*ACTKDP
Trigger: GGGGTCTTTGGTGCATGCTCAAGTTTGAGAACCATA...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp GCCAGGGTTAAAAACCACTGCCTCGGTAGACTGCAGAATGGACAGAGTGCAGATAAAGAAAACACGGTGTaGTTAAGTGGGATCACAGAA +
Preference number: 2 (lower is better)
Translates to: ARVKNHCLGRLQNGQSADKENTV*LSGITE
Trigger: TTCTGTGATCCCACTTAATCACACCGTGTTTTCTTT...ATCTGCACTCTGTCCATTCTGCAGTCTACCGAGGCAGTGGTTTTTAACCCTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp GCAGAAAGCCACAGATTAAAGACAGCATTAGGTGGAGGAGCCCCTTTTGGGCACCATATTCTGAAATGCTaGATCCACGAGTCAGACAAT +
Preference number: 2 (lower is better)
Translates to: AESHRLKTALGGGAPFGHHILKC*IHESDN
Trigger: ATTGTCTGACTCGTGGATTCAGCATTTCAGAATATG...GTGCCCAAAAGGGGCTCCTCCACCTAATGCTGTCTTTAATCTGTGGCTTTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR GCA 90 bp AGTGGCCCACAGCTTATGCATATGTACATGCCCTCCAACAGTTCAGTTTGTAAACTAAGTGGGAAGTTCTaGCCGAGGCTGTTATGTGGT +
Preference number: 2 (lower is better)
Translates to: SGPQLMHMYMPSNSSVCKLSGKF*PRLLCG
Trigger: ACCACATAACAGCCTCGGGCAGAACTTCCCACTTAG...TTTACAAACTGAACTGTTGGAGGGCATGTACATATGCATAAGCTGTGGGCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CCA 90 bp ACTCAGGCTTTCAAAGGGTTGAGGAAAGGTCTTTTGTTTGAAGGAAGGAGTATCGACTCACAGGTCTGCTaGGCTGGTTTCAGCACTTTC +
Preference number: 2 (lower is better)
Translates to: TQAFKGLRKGLLFEGRSIDSQVC*AGFSTF
Trigger: GAAAGTGCTGAAACCAGCCCAGCAGACCTGTGAGTC...GATACTCCTTCCTTCAAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCAGCCCCCTCCAAATCTaGTACCAGGTAAACAAGCTA +
Preference number: 2 (lower is better)
Translates to: CKSVHISVPALYAQWASCSPLQI*YQVNKL
Trigger: TAGCTTGTTTACCTGGTACCAGATTTGGAGGGGGCT...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CCA 90 bp AGTGGCCCACAGCTTATGCATATGTACATGCCCTCCAACAGTTCAGTTTGTAAAAGCCAGGTTTTAGAGTaGTGGTTCTCAGCCTCAGCT +
Preference number: 2 (lower is better)
Translates to: SGPQLMHMYMPSNSSVCKSQVLE*WFSASA
Trigger: AGCTGAGGCTGAGAACCACCACTCTAAAACCTGGCT...TTTACAAACTGAACTGTTGGAGGGCATGTACATATGCATAAGCTGTGGGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCTGTTCAATCAGTGACTaGGGCAATGGTTCTGGTGGA +
Preference number: 2 (lower is better)
Translates to: CKSVHISVPALYAQWASCCSISD*GNGSGG
Trigger: TCCACCAGAACCATTGCCCCAGTCACTGATTGAACA...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CCA 90 bp TATGGAGCATTGCCAACAGCCCAGAGGGTTTCTTTGTGCCCTCTCTTGGTCACTAAAAGCTCAGATGACTaGAGATTGCTGATAGTGGAA +
Preference number: 2 (lower is better)
Translates to: YGALPTAQRVSLCPLLVTKSSDD*RLLIVE
Trigger: TTCCACTATCAGCAATCTCCAGTCATCTGAGCTTTT...AGTGACCAAGAGAGGGCACAAAGAAACCCTCTGGGCTGTTGGCAATGCTCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553588.1
3UTR-3UTR CCA 90 bp TCAACAAAAATTGTGGTGTATGCCATCAACCAGTTAACAGCTGAATTGGGGAAATCAGGGCACTCTCGCTaGAATACAGGCCTCCGAGTG +
Preference number: 2 (lower is better)
Translates to: STKIVVYAINQLTAELGKSGHSR*NTGLRV
Trigger: CACTCGGAGGCCTGTATTCCAGCGAGAGTGCCCTGA...TTTCCCCAATTCAGCTGTTAACTGGTTGATGGCATACACCACAATTTTTGTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556372.2
3UTR-3UTR TCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCTTCACTAATAGGCCATaGTCATGGGACCAATCACTG +
Preference number: 2 (lower is better)
Translates to: CKSVHISVPALYAQWASCFTNRP*SWDQSL
Trigger: CAGTGATTGGTCCCATGATCATGGCCTATTAGTGAA...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp GCAGAAAGCCACAGATTAAAGACAGCATTAGGTGGAGGAGCCCCTTTTGGGCACAATGAAACAAAGACCTaGAATCAATCATGCATCACC +
Preference number: 2 (lower is better)
Translates to: AESHRLKTALGGGAPFGHNETKT*NQSCIT
Trigger: GGTGATGCATGATTGATTTCAGGTCTTTGTTTCATT...GTGCCCAAAAGGGGCTCCTCCACCTAATGCTGTCTTTAATCTGTGGCTTTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp CACTGTATTCATAGGGCTAGTGCTGATGCCCCAATAAAAAGTTCTTTGATAAAACCATCGCATGAACCATaGCGTCCTCCAAGCCATGCC +
Preference number: 2 (lower is better)
Translates to: HCIHRASADAPIKSSLIKPSHEP*RPPSHA
Trigger: GGCATGGCTTGGAGGACGTCATGGTTCATGCGATGG...TTTTATCAAAGAACTTTTTATTGGGGCATCAGCACTAGCCCTATGAATACAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp GCCAGGGTTAAAAACCACTGCCTCGGTAGACTGCAGAATGGACAGAGTGCAGATGATGTCTACTCGCAGTaGCAGAAAAATTTCTTCTTT +
Preference number: 2 (lower is better)
Translates to: ARVKNHCLGRLQNGQSADDVYSQ*QKNFFF
Trigger: AAAGAAGAAATTTTTCTGTCACTGCGAGTAGACATC...ATCTGCACTCTGTCCATTCTGCAGTCTACCGAGGCAGTGGTTTTTAACCCTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp AATGAAATCAATGCTATGATGAGCCTGTCCCAGCTCTGCCGCAACCTACTCATGTCATCCATTTCATCTTaGGAACTCCTACTTGCTCCT +
Preference number: 2 (lower is better)
Translates to: NEINAMMSLSQLCRNLLMSSISS*ELLLAP
Trigger: AGGAGCAAGTAGGAGTTCTCAAGATGAAATGGATGA...CATGAGTAGGTTGCGGCAGAGCTGGGACAGGCTCATCATAGCATTGATTTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556372.2
3UTR-3UTR CCA 90 bp ACTCAGGCTTTCAAAGGGTTGAGGAAAGGTCTTTTGTTTGAAGGAAGGAGTATCGCTGAGGCAGGAGGATaGCTTGAGCTTATGAGTTCA +
Preference number: 2 (lower is better)
Translates to: TQAFKGLRKGLLFEGRSIAEAGG*LELMSS
Trigger: TGAACTCATAAGCTCAAGCCATCCTCCTGCCTCAGC...GATACTCCTTCCTTCAAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CCA 90 bp GCAGAAAGCCACAGATTAAAGACAGCATTAGGTGGAGGAGCCCCTTTTGGGCACAAATCTCTTTACTTATaGAGGGAATATGAGAGCACC +
Preference number: 2 (lower is better)
Translates to: AESHRLKTALGGGAPFGHKSLYL*REYEST
Trigger: GGTGCTCTCATATTCCCTCCATAAGTAAAGAGATTT...GTGCCCAAAAGGGGCTCCTCCACCTAATGCTGTCTTTAATCTGTGGCTTTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CAA 90 bp AATGTTTGTTCAATCAGTGACTGGGGCAATGGTTCTGGTGGACCTTaGTTATTCTTATTGGCTGTCCAGCATCTGAAGTACCTTCCCATG +
Preference number: 2 (lower is better)
Translates to: NVCSISDWGNGSGGP*LFLLAVQHLKYLPM
Trigger: CATGGGAAGGTACTTCAGATGCTGGACAGCCAATAAGAATAACAAAGGTCCACCAGAACCATTGCCCCAGTCACTGATTGAACAAACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CAA 90 bp ATGGGAATGATAACCATACCGGTCTCATGGGTCATCCATTTCATCTaGAGAACTCCTACTTGCTCCTTAGCTTTCACCAACAATGACCAG +
Preference number: 2 (lower is better)
Translates to: MGMITIPVSWVIHFI*RTPTCSLAFTNNDQ
Trigger: CTGGTCATTGTTGGTGAAAGCTAAGGAGCAAGTAGGAGTTCTCAAGATGAAATGGATGACCCATGAGACCGGTATGGTTATCATTCCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556372.2
3UTR-3UTR TCA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGAACTCCACATGCAGCTaGGCCATCATAAACACGCCA +
Preference number: 2 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVNSTCS*AIINTP
Trigger: TGGCGTGTTTATGATGGCTCAGCTGCATGTGGAGTT...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp CACTGTATTCATAGGGCTAGTGCTGATGCCCCAATAAAAAGTTCTTTGATAAAACCTCCAACCATCGCATaGACCATGACGTCCTCCAAG +
Preference number: 2 (lower is better)
Translates to: HCIHRASADAPIKSSLIKPPTIA*TMTSSK
Trigger: CTTGGAGGACGTCATGGTTCATGCGATGGTTGGAGG...TTTTATCAAAGAACTTTTTATTGGGGCATCAGCACTAGCCCTATGAATACAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCACTGTTTCCGGGCATTTaGTGTTCATCTTTTGGAGAC +
Preference number: 2 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSLFPGI*CSSFGD
Trigger: GTCTCCAAAAGATGAACATCAAATGCCCGGAAACAG...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp GAAAGTGGAACCCCAAGTTTCACTGTATTCATAGGGCTAGTGCTGATGCCCCAATTTACCAAGCATTTATaGTGTCTACTCGCAGTGACA +
Preference number: 2 (lower is better)
Translates to: ESGTPSFTVFIGLVLMPQFTKHL*CLLAVT
Trigger: TGTCACTGCGAGTAGACATCATAAATGCTTGGTAAA...TTGGGGCATCAGCACTAGCCCTATGAATACAGTGAAACTTGGGGTTCCACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCTTAAAAACATTTGATTaGGGGGTCAGCAAGGGTCAG +
Preference number: 2 (lower is better)
Translates to: CKSVHISVPALYAQWASCLKTFD*GVSKGQ
Trigger: CTGACCCTTGCTGACCCCTCAATCAAATGTTTTTAA...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCATAAGTAAACAGGAGTaGCCCACCTTAGAATCTCAC +
Preference number: 2 (lower is better)
Translates to: CKSVHISVPALYAQWASCISKQE*PTLESH
Trigger: GTGAGATTCTAAGGTGGGTCACTCCTGTTTACTTAT...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp TTAAAGTCAACAAAAATTGTGGTGTATGCCATCAACCAGTTAACAGCTGAATTGGAGAACTCACGAAACTaGCGGGAAGGTGGAGGAGCC +
Preference number: 2 (lower is better)
Translates to: LKSTKIVVYAINQLTAELENSRN*REGGGA
Trigger: GGCTCCTCCACCTTCCCGTCAGTTTCGTGAGTTCTC...CAATTCAGCTGTTAACTGGTTGATGGCATACACCACAATTTTTGTTGACTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556372.2
3UTR-3UTR GCA 90 bp CACTGTATTCATAGGGCTAGTGCTGATGCCCCAATAAAAAGTTCTTTGATAAAAGGGGGAAGGAGGTGCTaGCCCATTCAGCACCTATTT +
Preference number: 2 (lower is better)
Translates to: HCIHRASADAPIKSSLIKGGRRC*PIQHLF
Trigger: AAATAGGTGCTGAATGGGGCAGCACCTCCTTCCCCC...TTTTATCAAAGAACTTTTTATTGGGGCATCAGCACTAGCCCTATGAATACAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR GCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCCCACCTTGCCAAGATTaGTTCTTTGCTGAATGTCTT +
Preference number: 2 (lower is better)
Translates to: CKSVHISVPALYAQWASCPPCQD*FFAECL
Trigger: AAGACATTCAGCAAAGAAGCAATCTTGGCAAGGTGG...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR GCA 90 bp GAAAGTGGAACCCCAAGTTTCACTGTATTCATAGGGCTAGTGCTGATGCCCCAAGTGCTTTTAAGTTGGTaGATTAAGGTGGTATGGCAA +
Preference number: 2 (lower is better)
Translates to: ESGTPSFTVFIGLVLMPQVLLSW*IKVVWQ
Trigger: TTGCCATACCACCTTAATGCACCAACTTAAAAGCAC...TTGGGGCATCAGCACTAGCCCTATGAATACAGTGAAACTTGGGGTTCCACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR GCA 90 bp GAGTTGGTTCTGGTGGTGAAAGGACTGGGAATGTCGATTAAGATATGCAAGACTAAATGTAGCAGTAGTTaGGTCTGTGGCTTTCTCTGC +
Preference number: 2 (lower is better)
Translates to: ELVLVVKGLGMSIKICKTKCSSS*VCGFLC
Trigger: GCAGAGAAAGCCACAGACGCAACTACTGCTACATTT...AGTCTTGCATATCTTAATCGACATTCCCAGTCCTTTCACCACCAGAACCAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554375.5
3UTR-3UTR CCA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCATACTTCCCCAAAGCATaGCCCCAAGAAGCCATTATT +
Preference number: 2 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSYFPKA*PQEAII
Trigger: AATAATGGCTTCTTGGGGCCATGCTTTGGGGAAGTA...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CCA 90 bp ACTCAGGCTTTCAAAGGGTTGAGGAAAGGTCTTTTGTTTGAAGGAAGGAGTATCAAGCAGATGCATGAGTaGGAGTCCCTCTACAATGTG +
Preference number: 2 (lower is better)
Translates to: TQAFKGLRKGLLFEGRSIKQMHE*ESLYNV
Trigger: CACATTGTAGAGGGACTCCCACTCATGCATCTGCTT...GATACTCCTTCCTTCAAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CCA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCATCATTACACTTCGTATaGGAAACAGGGGCAATCGCA +
Preference number: 2 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSSLHFV*ETGAIA
Trigger: TGCGATTGCCCCTGTTTCCCATACGAAGTGTAATGA...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CCA 90 bp AGTGGCCCACAGCTTATGCATATGTACATGCCCTCCAACAGTTCAGTTTGTAAAGGGGAAAAACCTGTGTaGCTCAGAATCACAGTAATG +
Preference number: 2 (lower is better)
Translates to: SGPQLMHMYMPSNSSVCKGEKPV*LRITVM
Trigger: CATTACTGTGATTCTGAGCCACACAGGTTTTTCCCC...TTTACAAACTGAACTGTTGGAGGGCATGTACATATGCATAAGCTGTGGGCCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CAA 90 bp CATCTTTTGGAGACGTTAACACAGGAGAAAGCATCTCTCTACCACTaGCATTTAGTTCTGAGTGATGGAACTCACCATTTTCCTCACCCT +
Preference number: 2 (lower is better)
Translates to: HLLETLTQEKASLYH*HLVLSDGTHHFPHP
Trigger: AGGGTGAGGAAAATGGTGAGTTCCATCACTCAGAACTAAATGCAAGTGGTAGAGAGATGCTTTCTCCTGTGTTAACGTCTCCAAAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp GGCTCAAAGGCAAGCCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTAAGATTCCCACAACATaGTCTTCTGAGAGAAAGAAT +
Preference number: 2 (lower is better)
Translates to: GSKASLISCEHNSIQVSTKIPTT*SSERKN
Trigger: ATTCTTTCTCTCAGAAGATCATGTTGTGGGAATCTT...AGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGGCTTGCCTTTGAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
3UTR-3UTR TCA 90 bp TGGAGGTTTTCACTAATAGGCCATGATCATGGGACCAATCACTGCATGAGTCATGCCCCAAAACTTGGTTaGTTTATCTTATTGGCACTC +
Preference number: 2 (lower is better)
Translates to: WRFSLIGHDHGTNHCMSHAPKLG*FILLAL
Trigger: GAGTGCCAATAAGATAAATCAACCAAGTTTTGGGGC...ATGACTCATGCAGTGATTGGTCCCATGATCATGGCCTATTAGTGAAAACCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp ACTCAGGCTTTCAAAGGGTTGAGGAAAGGTCTTTTGTTTGAAGGAAGGAGTATCAGGCCCCTGAATGAATaGCAGACACTCCTGATAATA +
Preference number: 2 (lower is better)
Translates to: TQAFKGLRKGLLFEGRSIRPLNE*QTLLII
Trigger: TATTATCAGGAGTGTCTGTCATTCATTCAGGGGCCT...GATACTCCTTCCTTCAAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp CACTGTATTCATAGGGCTAGTGCTGATGCCCCAATAAAAAGTTCTTTGATAAAATGTCAGCTAGGCCCCTaGATGAATGACAGACACTCC +
Preference number: 2 (lower is better)
Translates to: HCIHRASADAPIKSSLIKCQLGP*MNDRHS
Trigger: GGAGTGTCTGTCATTCATTCAGGGGCCTAGCTGACA...TTTTATCAAAGAACTTTTTATTGGGGCATCAGCACTAGCCCTATGAATACAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp GAAAGTGGAACCCCAAGTTTCACTGTATTCATAGGGCTAGTGCTGATGCCCCAAAATGAAACAAAGACCTaGAATCAATCATGCATCACC +
Preference number: 2 (lower is better)
Translates to: ESGTPSFTVFIGLVLMPQNETKT*NQSCIT
Trigger: GGTGATGCATGATTGATTTCAGGTCTTTGTTTCATT...TTGGGGCATCAGCACTAGCCCTATGAATACAGTGAAACTTGGGGTTCCACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp TGCTCTGAAGTACTGAGATTCAGTCCTAGCAAGAGATTACCAATAACTCAACAGTATGGTTCTCAAACTTaGGCATGCACCAAAGACCCC +
Preference number: 2 (lower is better)
Translates to: CSEVLRFSPSKRLPITQQYGSQT*ACTKDP
Trigger: GGGGTCTTTGGTGCATGCTCAAGTTTGAGAACCATA...CTGTTGAGTTATTGGTAATCTCTTGCTAGGACTGAATCTCAGTACTTCAGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR GCA 90 bp CACTGTATTCATAGGGCTAGTGCTGATGCCCCAATAAAAAGTTCTTTGATAAAAACTCTCCCACACTACTaGATGAGAACCAGGGGTGGA +
Preference number: 2 (lower is better)
Translates to: HCIHRASADAPIKSSLIKTLPHY*MRTRGG
Trigger: TCCACCCCTGGTTCTCATGCAGTAGTGTGGGAGAGT...TTTTATCAAAGAACTTTTTATTGGGGCATCAGCACTAGCCCTATGAATACAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR GCA 90 bp CACTGTATTCATAGGGCTAGTGCTGATGCCCCAATAAAAAGTTCTTTGATAAAAACTGCCTCGGTAGACTaGAGAATGGACAGAGTGCAG +
Preference number: 2 (lower is better)
Translates to: HCIHRASADAPIKSSLIKTASVD*RMDRVQ
Trigger: CTGCACTCTGTCCATTCTGCAGTCTACCGAGGCAGT...TTTTATCAAAGAACTTTTTATTGGGGCATCAGCACTAGCCCTATGAATACAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CCA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGCCGTGGCAAAGCCTATaGTTCTCAAACTTGAGCATG +
Preference number: 2 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVPWQSL*FSNLSM
Trigger: CATGCTCAAGTTTGAGAACCATAGGCTTTGCCACGG...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCTCTGTGCTTTTAAGTTaGTGCATTAAGGTGGTATGG +
Preference number: 2 (lower is better)
Translates to: CKSVHISVPALYAQWASCSVLLS*CIKVVW
Trigger: CCATACCACCTTAATGCACCAACTTAAAAGCACAGA...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CCA 90 bp CCAAGTTCATCATATGGAGCATTGCCAACAGCCCAGAGGGTTTCTTTGTGCCCTAGAGAAGCACTATTTTaGCTTCTACCAATTAGTGTT +
Preference number: 2 (lower is better)
Translates to: PSSSYGALPTAQRVSLCPREALF*LLPISV
Trigger: AACACTAATTGGTAGAAGCCAAAATAGTGCTTCTCT...AGGGCACAAAGAAACCCTCTGGGCTGTTGGCAATGCTCCATATGATGAACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553588.1
3UTR CAA 90 bp TGGAGAACCCATCGCATCAGCAATGACTGTGCCAGCCTAGTTCCTTaGTCTCAACACTCTGTATCTTTTTCAATTCCAAGTGACTTTAAT +
Preference number: 2 (lower is better)
Translates to: WRTHRISNDCASLVP*SQHSVSFSIPSDFN
Trigger: ATTAAAGTCACTTGGAATTGAAAAAGATACAGAGTGTTGAGACAAAGGAACTAGGCTGGCACAGTCATTGCTGATGCGATGGGTTCTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CAA 90 bp GGACACAGGCATATGACTACTAATCAGATCCACCTACCCCATATTTaGAATCAGAAACTAGTGATTCAAAGACATCAGGAACACACAGGG +
Preference number: 2 (lower is better)
Translates to: GHRHMTTNQIHLPHI*NQKLVIQRHQEHTG
Trigger: CCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTTCTGATTCAAAATATGGGGTAGGTGGATCTGATTAGTAGTCATATGCCTGTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp CTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGGCCCCAAAACTTGGTTaGTTTATCTTATTGGCACTC +
Preference number: 2 (lower is better)
Translates to: LNHLLHYTNLCVCVCVCVAPKLG*FILLAL
Trigger: GAGTGCCAATAAGATAAATCAACCAAGTTTTGGGGC...CACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
3UTR-3UTR TCA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGAGGGCAGAGAAAATCTaGAAGTCTGGGATTCTAGTC +
Preference number: 2 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVRAEKI*KSGILV
Trigger: GACTAGAATCCCAGACTTTCAGATTTTCTCTGCCCT...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp AGTGGCCCACAGCTTATGCATATGTACATGCCCTCCAACAGTTCAGTTTGTAAATACAGCACCTTAAAATaGGGAGCACAATTTACAACC +
Preference number: 2 (lower is better)
Translates to: SGPQLMHMYMPSNSSVCKYSTLK*GAQFTT
Trigger: GGTTGTAAATTGTGCTCCTCATTTTAAGGTGCTGTA...TTTACAAACTGAACTGTTGGAGGGCATGTACATATGCATAAGCTGTGGGCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp ACTCAGGCTTTCAAAGGGTTGAGGAAAGGTCTTTTGTTTGAAGGAAGGAGTATCAGCAGATCAAATACATaGGCTCAAGGATCATCCTCA +
Preference number: 2 (lower is better)
Translates to: TQAFKGLRKGLLFEGRSISRSNT*AQGSSS
Trigger: TGAGGATGATCCTTGAGCTCATGTATTTGATCTGCT...GATACTCCTTCCTTCAAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCGATGTCTACTCGCAGTaGCAGAAAAATTTCTTCTTT +
Preference number: 2 (lower is better)
Translates to: CKSVHISVPALYAQWASCDVYSQ*QKNFFF
Trigger: AAAGAAGAAATTTTTCTGTCACTGCGAGTAGACATC...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR GCA 90 bp TGCTCTGAAGTACTGAGATTCAGTCCTAGCAAGAGATTACCAATAACTCAACAGCAGAAAATAAGCAGATaGATGAGTGGGAGTCCCTCT +
Preference number: 2 (lower is better)
Translates to: CSEVLRFSPSKRLPITQQQKISR*MSGSPS
Trigger: AGAGGGACTCCCACTCATGCATCTGCTTATTTTCTG...CTGTTGAGTTATTGGTAATCTCTTGCTAGGACTGAATCTCAGTACTTCAGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR GCA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCATTAGAATGGCCAGTTTaGAATAAGCTGCTGACAACA +
Preference number: 2 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSLEWPV*NKLLTT
Trigger: TGTTGTCAGCAGCTTATTGCAAACTGGCCATTCTAA...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR GCA 90 bp AGTGGCCCACAGCTTATGCATATGTACATGCCCTCCAACAGTTCAGTTTGTAAAGCTTTCCTAGAAGCCTaGAGTAATAAATGTGAATGC +
Preference number: 2 (lower is better)
Translates to: SGPQLMHMYMPSNSSVCKAFLEA*SNKCEC
Trigger: GCATTCACATTTATTACTGCAGGCTTCTAGGAAAGC...TTTACAAACTGAACTGTTGGAGGGCATGTACATATGCATAAGCTGTGGGCCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCTGCAGAAGCAGTTACTaGTTTTTCAAGAACAAAGAC +
Preference number: 2 (lower is better)
Translates to: CKSVHISVPALYAQWASCCRSSY*FFKNKD
Trigger: GTCTTTGTTCTTGAAAAACCAGTAACTGCTTCTGCA...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CCA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGTACTTCCCCAAAGCATaGCCCCAAGAAGCCATTATT +
Preference number: 2 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVYFPKA*PQEAII
Trigger: AATAATGGCTTCTTGGGGCCATGCTTTGGGGAAGTA...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CAA 90 bp TTAGAATGGCCAGTTTGCAATAAGCTGCTGACAACAGGAGGGAGTTaGACATCAATACTGAGAGCAATTCAAATCGTTACCATGACTTTG +
Preference number: 2 (lower is better)
Translates to: LEWPVCNKLLTTGGS*TSILRAIQIVTMTL
Trigger: CAAAGTCATGGTAACGATTTGAATTGCTCTCAGTATTGATGTCAAACTCCCTCCTGTTGTCAGCAGCTTATTGCAAACTGGCCATTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp TGCTCTGAAGTACTGAGATTCAGTCCTAGCAAGAGATTACCAATAACTCAACAGCACAACATGATCTTCTaGGAGAAAGAATCCACTGCT +
Preference number: 2 (lower is better)
Translates to: CSEVLRFSPSKRLPITQQHNMIF*EKESTA
Trigger: AGCAGTGGATTCTTTCTCTCAGAAGATCATGTTGTG...CTGTTGAGTTATTGGTAATCTCTTGCTAGGACTGAATCTCAGTACTTCAGAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp GAGTTGGTTCTGGTGGTGAAAGGACTGGGAATGTCGATTAAGATATGCAAGACTAGCTGTAGTAAATGTTaGGACAGCAATAACAAGGTA +
Preference number: 2 (lower is better)
Translates to: ELVLVVKGLGMSIKICKTSCSKC*DSNNKV
Trigger: TACCTTGTTATTGCTGTCTCAACATTTACTACAGCT...AGTCTTGCATATCTTAATCGACATTCCCAGTCCTTTCACCACCAGAACCAACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
3UTR-3UTR TCA 90 bp TGCTCTGAAGTACTGAGATTCAGTCCTAGCAAGAGATTACCAATAACTCAACAGGCCCCAAAACTTGGTTaGTTTATCTTATTGGCACTC +
Preference number: 2 (lower is better)
Translates to: CSEVLRFSPSKRLPITQQAPKLG*FILLAL
Trigger: GAGTGCCAATAAGATAAATCAACCAAGTTTTGGGGC...CTGTTGAGTTATTGGTAATCTCTTGCTAGGACTGAATCTCAGTACTTCAGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp CACTGTATTCATAGGGCTAGTGCTGATGCCCCAATAAAAAGTTCTTTGATAAAAGGACCAATCACTGCATaGGTCATAGAGCTTGACACA +
Preference number: 2 (lower is better)
Translates to: HCIHRASADAPIKSSLIKGPITA*VIELDT
Trigger: TGTGTCAAGCTCTATGACTCATGCAGTGATTGGTCC...TTTTATCAAAGAACTTTTTATTGGGGCATCAGCACTAGCCCTATGAATACAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGTTAAAAACATTTGATTaGGGGGTCAGCAAGGGTCAG +
Preference number: 2 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVLKTFD*GVSKGQ
Trigger: CTGACCCTTGCTGACCCCTCAATCAAATGTTTTTAA...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR GCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCTTACTTAACAAAGGATaGTACAAGCATCACAGACTA +
Preference number: 2 (lower is better)
Translates to: CKSVHISVPALYAQWASCLLNKG*YKHHRL
Trigger: TAGTCTGTGATGCTTGTAGCATCCTTTGTTAAGTAA...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR GCA 90 bp ACTCAGGCTTTCAAAGGGTTGAGGAAAGGTCTTTTGTTTGAAGGAAGGAGTATCAATGTCTTCATGACATaGCCCATTCTTCAACACTGT +
Preference number: 2 (lower is better)
Translates to: TQAFKGLRKGLLFEGRSINVFMT*PILQHC
Trigger: ACAGTGTTGAAGAATGGGGCATGTCATGAAGACATT...GATACTCCTTCCTTCAAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCTGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CCA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCATTCATCTCCTTAAAATaGCATGACTTCGTAGAGATG +
Preference number: 2 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSFISLK*HDFVEM
Trigger: CATCTCTACGAAGTCATGCCATTTTAAGGAGATGAA...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CCA 90 bp TGCTCTGAAGTACTGAGATTCAGTCCTAGCAAGAGATTACCAATAACTCAACAGGCTATCCTCTGGAACTaGTTAATACAGAAAGCAAGC +
Preference number: 2 (lower is better)
Translates to: CSEVLRFSPSKRLPITQQAILWN*LIQKAS
Trigger: GCTTGCTTTCTGTATTAACCAGTTCCAGAGGATAGC...CTGTTGAGTTATTGGTAATCTCTTGCTAGGACTGAATCTCAGTACTTCAGAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CCA 90 bp CACTGTATTCATAGGGCTAGTGCTGATGCCCCAATAAAAAGTTCTTTGATAAAAAGCCCCCTCCAAATCTaGTACCAGGTAAACAAGCTA +
Preference number: 2 (lower is better)
Translates to: HCIHRASADAPIKSSLIKSPLQI*YQVNKL
Trigger: TAGCTTGTTTACCTGGTACCAGATTTGGAGGGGGCT...TTTTATCAAAGAACTTTTTATTGGGGCATCAGCACTAGCCCTATGAATACAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CCA 90 bp AGTGGCCCACAGCTTATGCATATGTACATGCCCTCCAACAGTTCAGTTTGTAAATTCCAAAGAAGGAAGTaGTTATATAGCATCAGTGTC +
Preference number: 2 (lower is better)
Translates to: SGPQLMHMYMPSNSSVCKFQRRK*LYSISV
Trigger: GACACTGATGCTATATAACCACTTCCTTCTTTGGAA...TTTACAAACTGAACTGTTGGAGGGCATGTACATATGCATAAGCTGTGGGCCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CAA 90 bp CACGTACAGCACCTTAAAATGAGGAGCACAATTTACAACCCTGTGTaGGAAAGTATTTGTGTGCTTAATATTCTGTTCTCTCAGGCAACT +
Preference number: 2 (lower is better)
Translates to: HVQHLKMRSTIYNPV*ESICVLNILFSQAT
Trigger: AGTTGCCTGAGAGAACAGAATATTAAGCACACAAATACTTTCCAACACAGGGTTGTAAATTGTGCTCCTCATTTTAAGGTGCTGTACGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTCACAACATGATCTTCTaGGAGAAAGAATCCACTGCT +
Preference number: 2 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCHNMIF*EKESTA
Trigger: AGCAGTGGATTCTTTCTCTCAGAAGATCATGTTGTG...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
3UTR-3UTR TCA 90 bp CACTGTATTCATAGGGCTAGTGCTGATGCCCCAATAAAAAGTTCTTTGATAAAATTTCTTTTTAAAGACTaGAACCCATCCCCACCTCCC +
Preference number: 2 (lower is better)
Translates to: HCIHRASADAPIKSSLIKFLFKD*NPSPPP
Trigger: GGGAGGTGGGGATGGGTTTCAGTCTTTAAAAAGAAA...TTTTATCAAAGAACTTTTTATTGGGGCATCAGCACTAGCCCTATGAATACAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR GCA 90 bp ACTCAGGCTTTCAAAGGGTTGAGGAAAGGTCTTTTGTTTGAAGGAAGGAGTATCTCTACACAAAAGGTATaGAGAAGCAGTTACTGGTTT +
Preference number: 2 (lower is better)
Translates to: TQAFKGLRKGLLFEGRSISTQKV*RSSYWF
Trigger: AAACCAGTAACTGCTTCTGCATACCTTTTGTGTAGA...GATACTCCTTCCTTCAAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCTGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR GCA 90 bp AGTGGCCCACAGCTTATGCATATGTACATGCCCTCCAACAGTTCAGTTTGTAAACTAACAATAAAGTCCTaGTTAGGACATAAAGGCTTA +
Preference number: 2 (lower is better)
Translates to: SGPQLMHMYMPSNSSVCKLTIKS*LGHKGL
Trigger: TAAGCCTTTATGTCCTAAGCAGGACTTTATTGTTAG...TTTACAAACTGAACTGTTGGAGGGCATGTACATATGCATAAGCTGTGGGCCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR GCA 90 bp CACTGTATTCATAGGGCTAGTGCTGATGCCCCAATAAAAAGTTCTTTGATAAAACTGACAAGAGCTAACTaGTTTTACCATCCCTCCAAC +
Preference number: 2 (lower is better)
Translates to: HCIHRASADAPIKSSLIKLTRAN*FYHPSN
Trigger: GTTGGAGGGATGGTAAAAGCAGTTAGCTCTTGTCAG...TTTTATCAAAGAACTTTTTATTGGGGCATCAGCACTAGCCCTATGAATACAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CCA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGGAAAATCTGAAAGTCTaGGATTCTAGTCCTGGCTTA +
Preference number: 2 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVENLKV*DSSPGL
Trigger: TAAGCCAGGACTAGAATCCCAGACTTTCAGATTTTC...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CAA 90 bp TTCAAGTCCCCTTTTCCAACTAGATTCATGCCCACCCACCTCCCTTaGATAAAGAAATCTGGAGTTTCCATTGATAAGGACTATAATTTT +
Preference number: 2 (lower is better)
Translates to: FKSPFPTRFMPTHLP*IKKSGVSIDKDYNF
Trigger: AAAATTATAGTCCTTATCAATGGAAACTCCAGATTTCTTTATCAAAGGGAGGTGGGTGGGCATGAATCTAGTTGGAAAAGGGGACTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp TGCTCTGAAGTACTGAGATTCAGTCCTAGCAAGAGATTACCAATAACTCAACAGAAGATTCCCACAACATaGTCTTCTGAGAGAAAGAAT +
Preference number: 2 (lower is better)
Translates to: CSEVLRFSPSKRLPITQQKIPTT*SSERKN
Trigger: ATTCTTTCTCTCAGAAGATCATGTTGTGGGAATCTT...CTGTTGAGTTATTGGTAATCTCTTGCTAGGACTGAATCTCAGTACTTCAGAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp CACTGTATTCATAGGGCTAGTGCTGATGCCCCAATAAAAAGTTCTTTGATAAAAAACAACCAAAAAGCATaGCATCGCTATTGGTCTCCA +
Preference number: 2 (lower is better)
Translates to: HCIHRASADAPIKSSLIKNNQKA*HRYWSP
Trigger: TGGAGACCAATAGCGATGTCATGCTTTTTGGTTGTT...TTTTATCAAAGAACTTTTTATTGGGGCATCAGCACTAGCCCTATGAATACAGTG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR GCA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGTCTACACAAAAGGTATaGAGAAGCAGTTACTGGTTT +
Preference number: 2 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVSTQKV*RSSYWF
Trigger: AAACCAGTAACTGCTTCTGCATACCTTTTGTGTAGA...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR GCA 90 bp ACTCAGGCTTTCAAAGGGTTGAGGAAAGGTCTTTTGTTTGAAGGAAGGAGTATCTTCTCAGTCTTAAAGTaGCATGTAAACTTAGCTTCA +
Preference number: 2 (lower is better)
Translates to: TQAFKGLRKGLLFEGRSIFSVLK*HVNLAS
Trigger: TGAAGCTAAGTTTACATGGCACTTTAAGACTGAGAA...GATACTCCTTCCTTCAAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCTGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR TCA 90 bp TTGGAACTTCCTCAAATGATATTAAAAGCTCTACACAAAAGGTATGCAGAAGCACACAACATGATCTTCTaGGAGAAAGAATCCACTGCT +
Preference number: 2 (lower is better)
Translates to: LELPQMILKALHKRYAEAHNMIF*EKESTA
Trigger: AGCAGTGGATTCTTTCTCTCAGAAGATCATGTTGTG...TGCTTCTGCATACCTTTTGTGTAGAGCTTTTAATATCATTTGAGGAAGTTCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
3UTR-3UTR TCA 90 bp CACTGTATTCATAGGGCTAGTGCTGATGCCCCAATAAAAAGTTCTTTGATAAAACTGCAAAAATTGAAATaGGAGCTTAACAGCCTACAG +
Preference number: 2 (lower is better)
Translates to: HCIHRASADAPIKSSLIKLQKLK*ELNSLQ
Trigger: CTGTAGGCTGTTAAGCTCTCATTTCAATTTTTGCAG...TTTTATCAAAGAACTTTTTATTGGGGCATCAGCACTAGCCCTATGAATACAGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CCA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTTGCAGAAGCAGTTACTaGTTTTTCAAGAACAAAGAC +
Preference number: 2 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCCRSSY*FFKNKD
Trigger: GTCTTTGTTCTTGAAAAACCAGTAACTGCTTCTGCA...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
3UTR-3UTR CCA 90 bp CACTGTATTCATAGGGCTAGTGCTGATGCCCCAATAAAAAGTTCTTTGATAAAATCTAAGGCTATCCTCTaGAACTGGTTAATACAGAAA +
Preference number: 2 (lower is better)
Translates to: HCIHRASADAPIKSSLIKSKAIL*NWLIQK
Trigger: TTTCTGTATTAACCAGTTCCAGAGGATAGCCTTAGA...TTTTATCAAAGAACTTTTTATTGGGGCATCAGCACTAGCCCTATGAATACAGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR GCA 72 bp CACTGCTGCGTGAGAACCAGAGGCGACTCACAGGTCTaGTGGGCTGGTTTCAGCACTTTCCCGTCCCATCAT +
Preference number: 3 (lower is better)
Translates to: HCCVRTRGDSQV*WAGFSTFPSHH
Trigger: ATGATGGGACGGGAAAGTGCTGAAACCAGCCCAGCAGACCTGTGAGTCGCCTCTGGTTCTCACGCAGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CCA 72 bp CAGCACTCTCCCACACTACTGCATGAGAACCAGGGGTaGAACATCCCTGTGAGCACACACACACTGCTGCGT +
Preference number: 3 (lower is better)
Translates to: QHSPTLLHENQG*NIPVSTHTLLR
Trigger: ACGCAGCAGTGTGTGTGTGCTCACAGGGATGTTCCACCCCTGGTTCTCATGCAGTAGTGTGGGAGAGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CCA 72 bp CAGAGCTGGGTGATTTGGGGGCTTGTGATGCTGGTGTaGTTGGCTCCACTGCATCCATGTGAACTGCACTGG +
Preference number: 3 (lower is better)
Translates to: QSWVIWGLVMLV*LAPLHPCELHW
Trigger: CCAGTGCAGTTCACATGGATGCAGTGGAGCCAACCACACCAGCATCACAAGCCCCCAAATCACCCAGCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554375.5
3UTR CCA 72 bp TCTCTGCTGCAGAGGTCCTCACCAACCACTCAGAGCTaGGTGATTTGGGGGCTTGTGATGCTGGTGTGGTTG +
Preference number: 3 (lower is better)
Translates to: SLLQRSSPTTQS*VIWGLVMLVWL
Trigger: CAACCACACCAGCATCACAAGCCCCCAAATCACCCAGCTCTGAGTGGTTGGTGAGGACCTCTGCAGCAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554375.5
3UTR-3UTR CAA 90 bp CACTGCTGCGTGAGAACCAGAGGCGACTCACAGGTCTGCTGGGCTGGTTTCAGCCACAAAGTCCAACATTaGCTTCAGCAACACCCAGTC +
Preference number: 3 (lower is better)
Translates to: HCCVRTRGDSQVCWAGFSHKVQH*LQQHPV
Trigger: GACTGGGTGTTGCTGAAGCAAATGTTGGACTTTGTG...GCTGAAACCAGCCCAGCAGACCTGTGAGTCGCCTCTGGTTCTCACGCAGCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CAA 90 bp TTCTCTGCTGCAGAGGTCCTCACCAACCACTCAGAGCTGGGTGATTTGGGGGCTAGGGGAGACAGGGGATaGAACTTCTGCTCCATACGT +
Preference number: 3 (lower is better)
Translates to: FSAAEVLTNHSELGDLGARGDRG*NFCSIR
Trigger: ACGTATGGAGCAGAAGTTCAATCCCCTGTCTCCCCT...AGCCCCCAAATCACCCAGCTCTGAGTGGTTGGTGAGGACCTCTGCAGCAGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554375.5
3UTR GCA 72 bp TCCAAGCCATGCCTCCAACTAGACTGCATCCACAGCTaGTACAGTAAGCCACTCTGCTCTCAGCCCAGCTCA +
Preference number: 3 (lower is better)
Translates to: SKPCLQLDCIHS*YSKPLCSQPSS
Trigger: TGAGCTGGGCTGAGAGCAGAGTGGCTTACTGTAGCAGCTGTGGATGCAGTCTAGTTGGAGGCATGGCTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CAA 90 bp GCAGAAAGCCACAGATTAAAGACAGCATTAGGTGGAGGAGCCCCTTTTGGGCACCCTAGGGACCACACATaGAGAATTCCTGCTCTGGGC +
Preference number: 3 (lower is better)
Translates to: AESHRLKTALGGGAPFGHPRDHT*RIPALG
Trigger: GCCCAGAGCAGGAATTCTCAATGTGTGGTCCCTAGG...GTGCCCAAAAGGGGCTCCTCCACCTAATGCTGTCTTTAATCTGTGGCTTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CAA 90 bp GAAAGTGGAACCCCAAGTTTCACTGTATTCATAGGGCTAGTGCTGATGCCCCAACCTACCTCACTGGGCTaGGAGGAGGAACAAGGGAGG +
Preference number: 3 (lower is better)
Translates to: ESGTPSFTVFIGLVLMPQPTSLG*EEEQGR
Trigger: CCTCCCTTGTTCCTCCTCCAAGCCCAGTGAGGTAGG...TTGGGGCATCAGCACTAGCCCTATGAATACAGTGAAACTTGGGGTTCCACTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CAA 90 bp TCTGTGGCTTTCTCTGCTGCAGAGGTCCTCACCAACCACTCAGAGCTGGGTGATGGTTTCCGCTTCCTCTaGATGTCACGTGAACATGGT +
Preference number: 3 (lower is better)
Translates to: SVAFSAAEVLTNHSELGDGFRFL*MSREHG
Trigger: ACCATGTTCACGTGACATCAAGAGGAAGCGGAAACC...ATCACCCAGCTCTGAGTGGTTGGTGAGGACCTCTGCAGCAGAGAAAGCCACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554375.5
3UTR TCA 72 bp CCTGGAGCCAAAGTGGAGAACCCATCGCATCAGCAATaGCTGTGCCAGCCTAGTTCCTTTGTCTCAACACTC +
Preference number: 3 (lower is better)
Translates to: PGAKVENPSHQQ*LCQPSSFVSTL
Trigger: GAGTGTTGAGACAAAGGAACTAGGCTGGCACAGTCATTGCTGATGCGATGGGTTCTCCACTTTGGCTCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR TCA 72 bp TATGGCAAAGGAACTCACTGGCATACAGGTGTTCACTaGAATAACGGAGGTGGCGGCAGAGACCGGCATCCA +
Preference number: 3 (lower is better)
Translates to: YGKGTHWHTGVH*NNGGGGRDRHP
Trigger: TGGATGCCGGTCTCTGCCGCCACCTCCGTTATTTCAGTGAACACCTGTATGCCAGTGAGTTCCTTTGCCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR TCA 72 bp GTGTACATTTGCCTGTCTGGCAGAGCAGTGTGCTGGTaGACACCTTCGGTGAGAAGCATCGGCAAGAACATC +
Preference number: 3 (lower is better)
Translates to: VYICLSGRAVCW*TPSVRSIGKNI
Trigger: GATGTTCTTGCCGATGCTTCTCACCGAAGGTGTTCACCAGCACACTGCTCTGCCAGACAGGCAAATGTACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554375.5
3UTR TCA 72 bp TGTGGCCACTGGTTTCCGCTTCCTCTTGATGTCACGTaGACATGGTGGTCCCCAGTGTACATTTGCCTGTCT +
Preference number: 3 (lower is better)
Translates to: CGHWFPLPLDVT*TWWSPVYICLS
Trigger: AGACAGGCAAATGTACACTGGGGACCACCATGTTCACGTGACATCAAGAGGAAGCGGAAACCAGTGGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554375.5
3UTR GCA 72 bp CAGACACTGGCCCATGGCCCAGTGGCCCACAGCTTATaGATATGTACATGCCCTCCAACAGTTCAGTTTGTA +
Preference number: 3 (lower is better)
Translates to: QTLAHGPVAHSL*ICTCPPTVQFV
Trigger: TACAAACTGAACTGTTGGAGGGCATGTACATATGCATAAGCTGTGGGCCACTGGGCCATGGGCCAGTGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR GCA 72 bp AGCCCAGAGGGTTTCTTTGTGCCCTCTCTTGGTCACTaGCCCCCACCAAAGAGAAGCACTATTTTGGCTTCT +
Preference number: 3 (lower is better)
Translates to: SPEGFFVPSLGH*PPPKRSTILAS
Trigger: AGAAGCCAAAATAGTGCTTCTCTTTGGTGGGGGGCAGTGACCAAGAGAGGGCACAAAGAAACCCTCTGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553588.1
3UTR GCA 72 bp TGCATCCATGTGAACTGCACTGGGGCTAGACAAAGATaGTGTGGCCACTGGTTTCCGCTTCCTCTTGATGTC +
Preference number: 3 (lower is better)
Translates to: CIHVNCTGARQR*CGHWFPLPLDV
Trigger: GACATCAAGAGGAAGCGGAAACCAGTGGCCACAGCATCTTTGTCTAGCCCCAGTGCAGTTCACATGGATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554375.5
3UTR CCA 72 bp GAAATCAATCATGCATCACCACCAGGAGCCTTCGCCTaGAGCCAAAGTGGAGAACCCATCGCATCAGCAATG +
Preference number: 3 (lower is better)
Translates to: EINHASPPGAFA*SQSGEPIASAM
Trigger: CATTGCTGATGCGATGGGTTCTCCACTTTGGCTCCAGGCGAAGGCTCCTGGTGGTGATGCATGATTGATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CAA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCAAGGGGCAATCGCACTTaGGGGGAAGGAGGTGCTGCC +
Preference number: 3 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSRGNRT*GEGGAA
Trigger: GGCAGCACCTCCTTCCCCCAAAGTGCGATTGCCCCT...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CAA 90 bp GAGCATTGCCAACAGCCCAGAGGGTTTCTTTGTGCCCTCTCTTGGTCACTGCCCTCAGATGACTGGAGATaGCTGATAGTGGAATATAGG +
Preference number: 3 (lower is better)
Translates to: EHCQQPRGFLCALSWSLPSDDWR*LIVEYR
Trigger: CCTATATTCCACTATCAGCAATCTCCAGTCATCTGA...GGGCAGTGACCAAGAGAGGGCACAAAGAAACCCTCTGGGCTGTTGGCAATGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553588.1
3UTR TCA 72 bp GAGCTAACTGCTTTTACCATCCCTCCAACCATCGCATaGACCATGACGTCCTCCAAGCCATGCCTCCAACTA +
Preference number: 3 (lower is better)
Translates to: ELTAFTIPPTIA*TMTSSKPCLQL
Trigger: TAGTTGGAGGCATGGCTTGGAGGACGTCATGGTTCATGCGATGGTTGGAGGGATGGTAAAAGCAGTTAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR TCA 72 bp ACAAAGATGCTGTGGCCACTGGTTTCCGCTTCCTCTTaGTGTCACGTGAACATGGTGGTCCCCAGTGTACAT +
Preference number: 3 (lower is better)
Translates to: TKMLWPLVSASS*CHVNMVVPSVH
Trigger: ATGTACACTGGGGACCACCATGTTCACGTGACATCAAGAGGAAGCGGAAACCAGTGGCCACAGCATCTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554375.5
3UTR GCA 72 bp CTAGACTGCATCCACAGCTGCTACAGTAAGCCACTCTaGTCTCAGCCCAGCTCAGATAGGTTCACAAGACAT +
Preference number: 3 (lower is better)
Translates to: LDCIHSCYSKPL*SQPSSDRFTRH
Trigger: ATGTCTTGTGAACCTATCTGAGCTGGGCTGAGAGCAGAGTGGCTTACTGTAGCAGCTGTGGATGCAGTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR GCA 72 bp ATGTACGCACAGAGAAGGGATGAGCCCATTCACAGTTaGCTGGTAGAGAAACAGCCCACCAGGACAAACAAG +
Preference number: 3 (lower is better)
Translates to: MYAQRRDEPIHS*LVEKQPTRTNK
Trigger: CTTGTTTGTCCTGGTGGGCTGTTTCTCTACCAGGCAACTGTGAATGGGCTCATCCCTTCTCTGTGCGTACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CCA 72 bp GAGAATGTGAAGAGGGGGCTCTGTGTCAGGCTAACATaGAACACCAGAGGGAATAAATCGCCACTGCTCACA +
Preference number: 3 (lower is better)
Translates to: ENVKRGLCVRLT*NTRGNKSPLLT
Trigger: TGTGAGCAGTGGCGATTTATTCCCTCTGGTGTTCCATGTTAGCCTGACACAGAGCCCCCTCTTCACATTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261530.12
3UTR-3UTR CAA 90 bp GCCAGGGTTAAAAACCACTGCCTCGGTAGACTGCAGAATGGACAGAGTGCAGATATCGTTACCATGACTTaGGGGTGGCATCAGTTTGCA +
Preference number: 3 (lower is better)
Translates to: ARVKNHCLGRLQNGQSADIVTMT*GWHQFA
Trigger: TGCAAACTGATGCCACCCCAAAGTCATGGTAACGAT...ATCTGCACTCTGTCCATTCTGCAGTCTACCGAGGCAGTGGTTTTTAACCCTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CAA 90 bp GCAGAAAGCCACAGATTAAAGACAGCATTAGGTGGAGGAGCCCCTTTTGGGCACATCGTTACCATGACTTaGGGGTGGCATCAGTTTGCA +
Preference number: 3 (lower is better)
Translates to: AESHRLKTALGGGAPFGHIVTMT*GWHQFA
Trigger: TGCAAACTGATGCCACCCCAAAGTCATGGTAACGAT...GTGCCCAAAAGGGGCTCCTCCACCTAATGCTGTCTTTAATCTGTGGCTTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR TCA 72 bp ATAAGCAGATGCATGAGTGGGAGTCCCTCTACAATGTaGCCAGAGCAGGGAGCACTTCACCAAGAGCTTCTA +
Preference number: 3 (lower is better)
Translates to: ISRCMSGSPSTM*PEQGALHQELL
Trigger: TAGAAGCTCTTGGTGAAGTGCTCCCTGCTCTGGTCACATTGTAGAGGGACTCCCACTCATGCATCTGCTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR TCA 72 bp AAATTGGCAGCTCAAGCACTAGCAGAGGGAAGCAGCTaGCAAGAGCTAACTGCTTTTACCATCCCTCCAACC +
Preference number: 3 (lower is better)
Translates to: KLAAQALAEGSS*QELTAFTIPPT
Trigger: GGTTGGAGGGATGGTAAAAGCAGTTAGCTCTTGTCAGCTGCTTCCCTCTGCTAGTGCTTGAGCTGCCAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR GCA 72 bp AGCACTAGCAGAGGGAAGCAGCTGACAAGAGCTAACTaGTTTTACCATCCCTCCAACCATCGCATGAACCAT +
Preference number: 3 (lower is better)
Translates to: STSRGKQLTRAN*FYHPSNHRMNH
Trigger: ATGGTTCATGCGATGGTTGGAGGGATGGTAAAAGCAGTTAGCTCTTGTCAGCTGCTTCCCTCTGCTAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CCA 72 bp CAAGTCAATAAAGAGGTCTCATCAGACACTGGCCCATaGCCCAGTGGCCCACAGCTTATGCATATGTACATG +
Preference number: 3 (lower is better)
Translates to: QVNKEVSSDTGP*PSGPQLMHMYM
Trigger: CATGTACATATGCATAAGCTGTGGGCCACTGGGCCATGGGCCAGTGTCTGATGAGACCTCTTTATTGACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CCA 72 bp TCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATaGGCCAGTTGCAGTAGGGTTTCCACGAATGCACCC +
Preference number: 3 (lower is better)
Translates to: SVHISVPALYAQ*ASCSRVSTNAP
Trigger: GGGTGCATTCGTGGAAACCCTACTGCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CAA 90 bp AGAAGCATCGGCAAGAACATCCAGGGAGTAAAGGGGAGACAGGGGATTGAACTTCACAAAGTCCAACATTaGCTTCAGCAACACCCAGTC +
Preference number: 3 (lower is better)
Translates to: RSIGKNIQGVKGRQGIELHKVQH*LQQHPV
Trigger: GACTGGGTGTTGCTGAAGCAAATGTTGGACTTTGTG...AAGTTCAATCCCCTGTCTCCCCTTTACTCCCTGGATGTTCTTGCCGATGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554375.5
3UTR GCA 72 bp TCAAGGATAGTATATCTAAGGAGCCCAGGAGTATCCTaGTTTAGGGCAGTTACCCTCTTCCCTAAGAGGTCC +
Preference number: 3 (lower is better)
Translates to: SRIVYLRSPGVS*FRAVTLFPKRS
Trigger: GGACCTCTTAGGGAAGAGGGTAACTGCCCTAAAGCAGGATACTCCTGGGCTCCTTAGATATACTATCCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CAA 90 bp AAGCAGATGCATGAGTGGGAGTCCCTCTACAATGTGACCAGAGCAGGGAGCACTTTGAGGCCCCAAAACTaGGTTGATTTATCTTATTGG +
Preference number: 3 (lower is better)
Translates to: KQMHEWESLYNVTRAGSTLRPQN*VDLSYW
Trigger: CCAATAAGATAAATCAACCAAGTTTTGGGGCCTCAA...AGTGCTCCCTGCTCTGGTCACATTGTAGAGGGACTCCCACTCATGCATCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CAA 90 bp GCCAGGGTTAAAAACCACTGCCTCGGTAGACTGCAGAATGGACAGAGTGCAGATTTTGATGTTCATCTTTaGGAGACGTTAACACAGGAG +
Preference number: 3 (lower is better)
Translates to: ARVKNHCLGRLQNGQSADFDVHL*ETLTQE
Trigger: CTCCTGTGTTAACGTCTCCAAAAGATGAACATCAAA...ATCTGCACTCTGTCCATTCTGCAGTCTACCGAGGCAGTGGTTTTTAACCCTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CAA 90 bp ACAGAAGACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTAATGACCCCAACACATTCCAGTaGGCTCCATTAACTTCAGGG +
Preference number: 3 (lower is better)
Translates to: TEDTAQACRFTGNRHCNDPNTFQ*APLTSG
Trigger: CCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGG...GTCATTACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGTCTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
3UTR TCA 72 bp CCCAGCTCTGCCGCAACCTACTCATGTGGTAGCAAGTaGCTTAAACTCTCTCAGCCTTCTTTTCTTCTTGTA +
Preference number: 3 (lower is better)
Translates to: PSSAATYSCGSK*LKLSQPSFLLV
Trigger: TACAAGAAGAAAAGAAGGCTGAGAGAGTTTAAGTCACTTGCTACCACATGAGTAGGTTGCGGCAGAGCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556372.2
3UTR-3UTR CAA 90 bp CAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTACACAAAGTCCAACATTaGCTTCAGCAACACCCAGTC +
Preference number: 3 (lower is better)
Translates to: QSVCVCVCVCVYTRPLSVHKVQH*LQQHPV
Trigger: GACTGGGTGTTGCTGAAGCAAATGTTGGACTTTGTG...TACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
3UTR-3UTR CAA 90 bp TGGAGGTTTTCACTAATAGGCCATGATCATGGGACCAATCACTGCATGAGTCATTTGCTGGTGTCTCTTTaGAGGCCCCAAAACTTGGTT +
Preference number: 3 (lower is better)
Translates to: WRFSLIGHDHGTNHCMSHLLVSL*RPQNLV
Trigger: AACCAAGTTTTGGGGCCTCAAAAGAGACACCAGCAA...ATGACTCATGCAGTGATTGGTCCCATGATCATGGCCTATTAGTGAAAACCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CAA 90 bp CAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTATTGCTGGTGTCTCTTTaGAGGCCCCAAAACTTGGTT +
Preference number: 3 (lower is better)
Translates to: QSVCVCVCVCVYTRPLSVLLVSL*RPQNLV
Trigger: AACCAAGTTTTGGGGCCTCAAAAGAGACACCAGCAA...TACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
3UTR-3UTR CAA 90 bp AGTGGCCCACAGCTTATGCATATGTACATGCCCTCCAACAGTTCAGTTTGTAAAGTCATAACTAGTCGCTaGTCCAGGGTGTTGTGCTTT +
Preference number: 3 (lower is better)
Translates to: SGPQLMHMYMPSNSSVCKVITSR*SRVLCF
Trigger: AAAGCACAACACCCTGGACAAGCGACTAGTTATGAC...TTTACAAACTGAACTGTTGGAGGGCATGTACATATGCATAAGCTGTGGGCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CAA 90 bp ACTCAGGCTTTCAAAGGGTTGAGGAAAGGTCTTTTGTTTGAAGGAAGGAGTATCAGCATGACATCGCTATaGGTCTCCAACCCCTGCAAA +
Preference number: 3 (lower is better)
Translates to: TQAFKGLRKGLLFEGRSISMTSL*VSNPCK
Trigger: TTTGCAGGGGTTGGAGACCAATAGCGATGTCATGCT...GATACTCCTTCCTTCAAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CAA 90 bp AGTGGCCCACAGCTTATGCATATGTACATGCCCTCCAACAGTTCAGTTTGTAAACTGAAAAGACAGAACTaGGATTTCTGGGCTCTGGCA +
Preference number: 3 (lower is better)
Translates to: SGPQLMHMYMPSNSSVCKLKRQN*DFWALA
Trigger: TGCCAGAGCCCAGAAATCCAAGTTCTGTCTTTTCAG...TTTACAAACTGAACTGTTGGAGGGCATGTACATATGCATAAGCTGTGGGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CAA 90 bp ACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTAATGACAGTGTTTCCCAACACATTCCAGTaGGCTCCATTAACTTCAGGG +
Preference number: 3 (lower is better)
Translates to: TQLRLVGLQAIDTVMTVFPNTFQ*APLTSG
Trigger: CCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGG...AAACACTGTCATTACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
3UTR TCA 72 bp GGAGGATGGCTTGAGCTTATGAGTTCAAGGTTACAGTaGGCTATGAACACATCACTGCACTCTAACCTGAGT +
Preference number: 3 (lower is better)
Translates to: GGWLELMSSRLQ*AMNTSLHSNLS
Trigger: ACTCAGGTTAGAGTGCAGTGATGTGTTCATAGCTCACTGTAACCTTGAACTCATAAGCTCAAGCCATCCTCC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CAA 90 bp ACTCAGGCTTTCAAAGGGTTGAGGAAAGGTCTTTTGTTTGAAGGAAGGAGTATCGCCAGCCTAGTTCCTTaGTCTCAACACTCTGTATCT +
Preference number: 3 (lower is better)
Translates to: TQAFKGLRKGLLFEGRSIASLVP*SQHSVS
Trigger: AGATACAGAGTGTTGAGACAAAGGAACTAGGCTGGC...GATACTCCTTCCTTCAAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR TCA 72 bp CTGAAAGTCTGGGATTCTAGTCCTGGCTTAGTTATGTaGTTTGGAGCAAGTCACTCAACTCTGTGGCTGTTT +
Preference number: 3 (lower is better)
Translates to: LKVWDSSPGLVM*FGASHSTLWLF
Trigger: AAACAGCCACAGAGTTGAGTGACTTGCTCCAAATCACATAACTAAGCCAGGACTAGAATCCCAGACTTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR TCA 72 bp GAAAGCATCTCTCTACCACTTGCATTTAGTTCTGAGTaGTGGAACTCACCATTTTCCTCACCCTTTCCCTCT +
Preference number: 3 (lower is better)
Translates to: ESISLPLAFSSE*WNSPFSSPFPS
Trigger: AGAGGGAAAGGGTGAGGAAAATGGTGAGTTCCATCACTCAGAACTAAATGCAAGTGGTAGAGAGATGCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CAA 90 bp TGCTCTGAAGTACTGAGATTCAGTCCTAGCAAGAGATTACCAATAACTCAACAGCTATGGTTCTCAAACTaGAGCATGCACCAAAGACCC +
Preference number: 3 (lower is better)
Translates to: CSEVLRFSPSKRLPITQQLWFSN*SMHQRP
Trigger: GGGTCTTTGGTGCATGCTCAAGTTTGAGAACCATAG...CTGTTGAGTTATTGGTAATCTCTTGCTAGGACTGAATCTCAGTACTTCAGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CAA 90 bp GAAAGTGGAACCCCAAGTTTCACTGTATTCATAGGGCTAGTGCTGATGCCCCAAGTAACACTAACATTTTaGGCCAGAGGTAGTTTTAAC +
Preference number: 3 (lower is better)
Translates to: ESGTPSFTVFIGLVLMPQVTLTF*ARGSFN
Trigger: GTTAAAACTACCTCTGGCCAAAAATGTTAGTGTTAC...TTGGGGCATCAGCACTAGCCCTATGAATACAGTGAAACTTGGGGTTCCACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR TCA 72 bp TTCAGGCACGACTGTATATATAACTCCACATGCAGCTaGGCCATCATAAACACGCCAAGTATAAAGGCATGT +
Preference number: 3 (lower is better)
Translates to: FRHDCIYNSTCS*AIINTPSIKAC
Trigger: ACATGCCTTTATACTTGGCGTGTTTATGATGGCTCAGCTGCATGTGGAGTTATATATACAGTCGTGCCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR TCA 72 bp CCCAGCTCAGATAGGTTCACAAGACATATAGGGCACTaGACACAGCTTCTAACGCTGAGATTTTTACATAGT +
Preference number: 3 (lower is better)
Translates to: PSSDRFTRHIGH*TQLLTLRFLHS
Trigger: ACTATGTAAAAATCTCAGCGTTAGAAGCTGTGTTCAGTGCCCTATATGTCTTGTGAACCTATCTGAGCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR TCA 72 bp TTACATGTGGGCCATACTAAAACACTTGCAGTGCTCTaGATAAACCATGCTTTTACCCTTGGAGGGCTTCAT +
Preference number: 3 (lower is better)
Translates to: LHVGHTKTLAVL*INHAFTLGGLH
Trigger: ATGAAGCCCTCCAAGGGTAAAAGCATGGTTTATTCAGAGCACTGCAAGTGTTTTAGTATGGCCCACATGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR TCA 72 bp TTAATGAGACCAAAATCATGGGATCAGAACTTAGTGTaGGCCAGCAGATTGGTTTTATCCCATGGGCACTTC +
Preference number: 3 (lower is better)
Translates to: LMRPKSWDQNLV*ASRLVLSHGHF
Trigger: GAAGTGCCCATGGGATAAAACCAATCTGCTGGCTCACACTAAGTTCTGATCCCATGATTTTGGTCTCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR GCA 72 bp GAATCAAGAGTAGGCTCAAAGGCAAGCCTTATCTCCTaGGAACACAATTCCATACAGGTCTCAACTCAATAT +
Preference number: 3 (lower is better)
Translates to: ESRVGSKASLIS*EHNSIQVSTQY
Trigger: ATATTGAGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGGCTTGCCTTTGAGCCTACTCTTGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
3UTR GCA 72 bp ACTGCCCAGTTTGAGTTAAAGTGCCCTCCTCCTTGCTaGCAAAATACCCTGTCATTCTTATTTCATTCTACA +
Preference number: 3 (lower is better)
Translates to: TAQFELKCPPPC*QNTLSFLFHST
Trigger: TGTAGAATGAAATAAGAATGACAGGGTATTTTGGCAGCAAGGAGGAGGGCACTTTAACTCAAACTGGGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CAA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACGGCCCCAAAACTTGGTaGATTTATCTTATTGGCACT +
Preference number: 3 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYGPKTW*IYLIGT
Trigger: AGTGCCAATAAGATAAATCAACCAAGTTTTGGGGCC...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
3UTR-3UTR CAA 90 bp ACTCAGGCTTTCAAAGGGTTGAGGAAAGGTCTTTTGTTTGAAGGAAGGAGTATCGGCCCCAAAACTTGGTaGATTTATCTTATTGGCACT +
Preference number: 3 (lower is better)
Translates to: TQAFKGLRKGLLFEGRSIGPKTW*IYLIGT
Trigger: AGTGCCAATAAGATAAATCAACCAAGTTTTGGGGCC...GATACTCCTTCCTTCAAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CAA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCATTTACAACCCTGTGTaGGAAAGTATTTGTGTGCTT +
Preference number: 3 (lower is better)
Translates to: CKSVHISVPALYAQWASCIYNPV*ESICVL
Trigger: AAGCACACAAATACTTTCCAACACAGGGTTGTAAAT...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CAA 90 bp ACTCAGGCTTTCAAAGGGTTGAGGAAAGGTCTTTTGTTTGAAGGAAGGAGTATCGCATCTCTCTACCACTaGCATTTAGTTCTGAGTGAT +
Preference number: 3 (lower is better)
Translates to: TQAFKGLRKGLLFEGRSIASLYH*HLVLSD
Trigger: ATCACTCAGAACTAAATGCAAGTGGTAGAGAGATGC...GATACTCCTTCCTTCAAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CAA 90 bp TGCTCTGAAGTACTGAGATTCAGTCCTAGCAAGAGATTACCAATAACTCAACAGGCTGTTTCCGGGCATTaGATGTTCATCTTTTGGAGA +
Preference number: 3 (lower is better)
Translates to: CSEVLRFSPSKRLPITQQAVSGH*MFIFWR
Trigger: TCTCCAAAAGATGAACATCAAATGCCCGGAAACAGC...CTGTTGAGTTATTGGTAATCTCTTGCTAGGACTGAATCTCAGTACTTCAGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CAA 90 bp CACTGTATTCATAGGGCTAGTGCTGATGCCCCAATAAAAAGTTCTTTGATAAAAAGCATGACATCGCTATaGGTCTCCAACCCCTGCAAA +
Preference number: 3 (lower is better)
Translates to: HCIHRASADAPIKSSLIKSMTSL*VSNPCK
Trigger: TTTGCAGGGGTTGGAGACCAATAGCGATGTCATGCT...TTTTATCAAAGAACTTTTTATTGGGGCATCAGCACTAGCCCTATGAATACAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CAA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGACAACAGGAGGGAGTTaGACATCAATACTGAGAGCA +
Preference number: 3 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVTTGGS*TSILRA
Trigger: TGCTCTCAGTATTGATGTCAAACTCCCTCCTGTTGT...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR TCA 72 bp GCAAACACAATGAACTCTTTAGCTATGCATATTCCCTaGAAAGACAGAACTTGGATTTCTGGGCTCTGGCAA +
Preference number: 3 (lower is better)
Translates to: ANTMNSLAMHIP*KDRTWISGLWQ
Trigger: TTGCCAGAGCCCAGAAATCCAAGTTCTGTCTTTTCAGGGAATATGCATAGCTAAAGAGTTCATTGTGTTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CAA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCACACAAAGTCCAACATTaGCTTCAGCAACACCCAGTC +
Preference number: 3 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSHKVQH*LQQHPV
Trigger: GACTGGGTGTTGCTGAAGCAAATGTTGGACTTTGTG...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
3UTR-3UTR CAA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACTTGAGGCCCCAAAACTaGGTTGATTTATCTTATTGG +
Preference number: 3 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYLRPQN*VDLSYW
Trigger: CCAATAAGATAAATCAACCAAGTTTTGGGGCCTCAA...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
3UTR-3UTR CAA 90 bp TCAACAAAAATTGTGGTGTATGCCATCAACCAGTTAACAGCTGAATTGGGGAAACTTGAGAACTCCTACTaGCTCCTTAGCTTTCACCAA +
Preference number: 3 (lower is better)
Translates to: STKIVVYAINQLTAELGKLENSY*LLSFHQ
Trigger: TTGGTGAAAGCTAAGGAGCAAGTAGGAGTTCTCAAG...TTTCCCCAATTCAGCTGTTAACTGGTTGATGGCATACACCACAATTTTTGTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556372.2
3UTR-3UTR CAA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGGCCCCAAAACTTGGTaGATTTATCTTATTGGCACT +
Preference number: 3 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCGPKTW*IYLIGT
Trigger: AGTGCCAATAAGATAAATCAACCAAGTTTTGGGGCC...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
3UTR TCA 72 bp AACCCAGAAAGACCCAAGTACATATGGATCCTGGATTaGATACCGAACCAGAAAAACAACATTACTGGGAAA +
Preference number: 3 (lower is better)
Translates to: NPERPKYIWILD*IPNQKNNITGK
Trigger: TTTCCCAGTAATGTTGTTTTTCTGGTTCGGTATTCAATCCAGGATCCATATGTACTTGGGTCTTTCTGGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261530.12
3UTR CCA 72 bp TTGTATAAAATGGGAATGATAACCATACCGGTCTCATaGGTCATCCATTTCATCTTGAGAACTCCTACTTGC +
Preference number: 3 (lower is better)
Translates to: LYKMGMITIPVS*VIHFILRTPTC
Trigger: GCAAGTAGGAGTTCTCAAGATGAAATGGATGACCCATGAGACCGGTATGGTTATCATTCCCATTTTATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556372.2
3UTR-3UTR CAA 90 bp TTAAAGTCAACAAAAATTGTGGTGTATGCCATCAACCAGTTAACAGCTGAATTGGTCATCCATTTCATCTaGAGAACTCCTACTTGCTCC +
Preference number: 3 (lower is better)
Translates to: LKSTKIVVYAINQLTAELVIHFI*RTPTCS
Trigger: GGAGCAAGTAGGAGTTCTCAAGATGAAATGGATGAC...CAATTCAGCTGTTAACTGGTTGATGGCATACACCACAATTTTTGTTGACTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556372.2
3UTR CCA 72 bp ACCTATGGGCTAAATTTTAATAGTAGAAGTCACTGGTaGGTGAATCCAGCAAGAACAGTTTTAATGGTAGCA +
Preference number: 3 (lower is better)
Translates to: TYGLNFNSRSHW*VNPARTVLMVA
Trigger: TGCTACCATTAAAACTGTTCTTGCTGGATTCACCCACCAGTGACTTCTACTATTAAAATTTAGCCCATAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CCA 72 bp GTTCAGTTTGTAAAAAGAGGCAGCAGAGGTATTGATTaGGAACAGACACTCTTTAACATCAGACTTGAATCT +
Preference number: 3 (lower is better)
Translates to: VQFVKRGSRGID*EQTLFNIRLES
Trigger: AGATTCAAGTCTGATGTTAAAGAGTGTCTGTTCCCAATCAATACCTCTGCTGCCTCTTTTTACAAACTGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR-3UTR CAA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGAACTGGCTACAAATTaGGAACTTCCTCAAATGATA +
Preference number: 3 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCELATN*ELPQMI
Trigger: TATCATTTGAGGAAGTTCCAAATTTGTAGCCAGTTC...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
3UTR TCA 72 bp ATAAATAAGCATCTCAGACTGACTCAGGTCTATCACTaGAAAACAAGAGATTATAACCCAGGGCAGAGAAAA +
Preference number: 3 (lower is better)
Translates to: INKHLRLTQVYH*KTRDYNPGQRK
Trigger: TTTTCTCTGCCCTGGGTTATAATCTCTTGTTTTTCAGTGATAGACCTGAGTCAGTCTGAGATGCTTATTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR TCA 72 bp CAGACACTCTTTAACATCAGACTTGAATCTGAATCTTaGCTGACACTTAATAGATATGTGACTCGAGCAAGT +
Preference number: 3 (lower is better)
Translates to: QTLFNIRLESES*LTLNRYVTRAS
Trigger: ACTTGCTCGAGTCACATATCTATTAAGTGTCAGTCAAGATTCAGATTCAAGTCTGATGTTAAAGAGTGTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CCA 72 bp TCAACCTATGGGCTAAATTTTAATAGTAGAAGTCACTaGTGGGTGAATCCAGCAAGAACAGTTTTAATGGTA +
Preference number: 3 (lower is better)
Translates to: STYGLNFNSRSH*WVNPARTVLMV
Trigger: TACCATTAAAACTGTTCTTGCTGGATTCACCCACCAGTGACTTCTACTATTAAAATTTAGCCCATAGGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR TCA 72 bp TGCTCTCCCTCTACCATATTCCTGATTATGAACAATTaGTATGTTCTCAGTCTTAAAGTGCCATGTAAACTT +
Preference number: 3 (lower is better)
Translates to: CSPSTIFLIMNN*YVLSLKVPCKL
Trigger: AAGTTTACATGGCACTTTAAGACTGAGAACATATCAATTGTTCATAATCAGGAATATGGTAGAGGGAGAGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR TCA 72 bp AAAGCCTTAAGATTAGAGTACCATATTCTGAAATGCTaGATCCACGAGTCAGACAATAACAACAACCAAAAA +
Preference number: 3 (lower is better)
Translates to: KALRLEYHILKC*IHESDNNNNQK
Trigger: TTTTTGGTTGTTGTTATTGTCTGACTCGTGGATTCAGCATTTCAGAATATGGTACTCTAATCTTAAGGCTTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp ACACTTCGTATGGGAAACAGGGGCAATCGCACTTTGGGGGAAGGAGGTGCTGCCCGAAGCTGCCGCCTCTaGTGTCGGGGGCTCAGCGCC +
Preference number: 4 (lower is better)
Translates to: TLRMGNRGNRTLGEGGAARSCRL*CRGLSA
Trigger: GGCGCTGAGCCCCCGACAGCAGAGGCGGCAGCTTCG...GGCAGCACCTCCTTCCCCCAAAGTGCGATTGCCCCTGTTTCCCATACGAAGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CAA 72 bp AGGTGGAGGAGCCAGGCAAGGGTGGCCAGAGCTGTCTaGTCAGGGCACTCTCGCTGGAATACAGGCCTCCGA +
Preference number: 4 (lower is better)
Translates to: RWRSQARVARAV*SGHSRWNTGLR
Trigger: TCGGAGGCCTGTATTCCAGCGAGAGTGCCCTGACAAGACAGCTCTGGCCACCCTTGCCTGGCTCCTCCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556372.2
CDS-3UTR CCA 90 bp GTGAACTGCACTGGGGCTAGACAAAGATGCTGTGGCCACTGGTTTCCGCTTCCTACGGCCGCCGCTTTTTaGGCCGACTCTCACCGCCGG +
Preference number: 4 (lower is better)
Translates to: VNCTGARQRCCGHWFPLPTAAAF*ADSHRR
Trigger: CCGGCGGTGAGAGTCGGCCCAAAAAGCGGCGGCCGT...AGGAAGCGGAAACCAGTGGCCACAGCATCTTTGTCTAGCCCCAGTGCAGTTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR TCA 90 bp ACACTTCGTATGGGAAACAGGGGCAATCGCACTTTGGGGGAAGGAGGTGCTGCCCCTTCCGCCTGCGCCTaGGTGGTCGACAAGGTGCAT +
Preference number: 4 (lower is better)
Translates to: TLRMGNRGNRTLGEGGAAPSACA*VVDKVH
Trigger: ATGCACCTTGTCGACCACTCAGGCGCAGGCGGAAGG...GGCAGCACCTCCTTCCCCCAAAGTGCGATTGCCCCTGTTTCCCATACGAAGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp GTGCTGGTGAACACCTTCGGTGAGAAGCATCGGCAAGAACATCCAGGGAGTAAACGAAGCTGCCGCCTCTaGTGTCGGGGGCTCAGCGCC +
Preference number: 4 (lower is better)
Translates to: VLVNTFGEKHRQEHPGSKRSCRL*CRGLSA
Trigger: GGCGCTGAGCCCCCGACAGCAGAGGCGGCAGCTTCG...TTTACTCCCTGGATGTTCTTGCCGATGCTTCTCACCGAAGGTGTTCACCAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR TCA 90 bp TCTGTGGCTTTCTCTGCTGCAGAGGTCCTCACCAACCACTCAGAGCTGGGTGATCCTTCCGCCTGCGCCTaGGTGGTCGACAAGGTGCAT +
Preference number: 4 (lower is better)
Translates to: SVAFSAAEVLTNHSELGDPSACA*VVDKVH
Trigger: ATGCACCTTGTCGACCACTCAGGCGCAGGCGGAAGG...ATCACCCAGCTCTGAGTGGTTGGTGAGGACCTCTGCAGCAGAGAAAGCCACAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR GCA 90 bp CACTGCTGCGTGAGAACCAGAGGCGACTCACAGGTCTGCTGGGCTGGTTTCAGCGGGGCTAGACAAAGATaGTGTGGCCACTGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: HCCVRTRGDSQVCWAGFSGARQR*CGHWFP
Trigger: CGGAAACCAGTGGCCACAGCATCTTTGTCTAGCCCC...GCTGAAACCAGCCCAGCAGACCTGTGAGTCGCCTCTGGTTCTCACGCAGCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp CACTGCTGCGTGAGAACCAGAGGCGACTCACAGGTCTGCTGGGCTGGTTTCAGCCCAACCACTCAGAGCTaGGTGATTTGGGGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: HCCVRTRGDSQVCWAGFSPTTQS*VIWGLV
Trigger: CACAAGCCCCCAAATCACCCAGCTCTGAGTGGTTGG...GCTGAAACCAGCCCAGCAGACCTGTGAGTCGCCTCTGGTTCTCACGCAGCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp CACTGCTGCGTGAGAACCAGAGGCGACTCACAGGTCTGCTGGGCTGGTTTCAGCTGGCCCATGGCCCAGTaGCCCACAGCTTATGCATAT +
Preference number: 4 (lower is better)
Translates to: HCCVRTRGDSQVCWAGFSWPMAQ*PTAYAY
Trigger: ATATGCATAAGCTGTGGGCCACTGGGCCATGGGCCA...GCTGAAACCAGCCCAGCAGACCTGTGAGTCGCCTCTGGTTCTCACGCAGCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp GTGAACTGCACTGGGGCTAGACAAAGATGCTGTGGCCACTGGTTTCCGCTTCCTGTACCAGCTCATCCATaGGGCCACATCAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: VNCTGARQRCCGHWFPLPVPAHP*GHISCR
Trigger: GCGGCAGCTGATGTGGCCTCATGGATGAGCTGGTAC...AGGAAGCGGAAACCAGTGGCCACAGCATCTTTGTCTAGCCCCAGTGCAGTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR TCA 90 bp CACTGCTGCGTGAGAACCAGAGGCGACTCACAGGTCTGCTGGGCTGGTTTCAGCTCCCACACTACTGCATaGGAACCAGGGGTGGAACAT +
Preference number: 4 (lower is better)
Translates to: HCCVRTRGDSQVCWAGFSSHTTA*EPGVEH
Trigger: ATGTTCCACCCCTGGTTCTCATGCAGTAGTGTGGGA...GCTGAAACCAGCCCAGCAGACCTGTGAGTCGCCTCTGGTTCTCACGCAGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp CACTGCTGCGTGAGAACCAGAGGCGACTCACAGGTCTGCTGGGCTGGTTTCAGCTGGAGGGTGAAGTCCTaGTCTCTAGCTGTATCCAGG +
Preference number: 4 (lower is better)
Translates to: HCCVRTRGDSQVCWAGFSWRVKS*SLAVSR
Trigger: CCTGGATACAGCTAGAGAGCAGGACTTCACCCTCCA...GCTGAAACCAGCCCAGCAGACCTGTGAGTCGCCTCTGGTTCTCACGCAGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CAA 72 bp GCAGAGGTCCTCACCAACCACTCAGAGCTGGGTGATTaGGGGGCTTGTGATGCTGGTGTGGTTGGCTCCACT +
Preference number: 4 (lower is better)
Translates to: AEVLTNHSELGD*GACDAGVVGST
Trigger: AGTGGAGCCAACCACACCAGCATCACAAGCCCCCAAATCACCCAGCTCTGAGTGGTTGGTGAGGACCTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR TCA 90 bp TCTGTGGCTTTCTCTGCTGCAGAGGTCCTCACCAACCACTCAGAGCTGGGTGATGGCCTCATCCAGACTTaGCTCAGAGGCCTCGCTGTA +
Preference number: 4 (lower is better)
Translates to: SVAFSAAEVLTNHSELGDGLIQT*LRGLAV
Trigger: TACAGCGAGGCCTCTGAGTCAAGTCTGGATGAGGCC...ATCACCCAGCTCTGAGTGGTTGGTGAGGACCTCTGCAGCAGAGAAAGCCACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR TCA 90 bp ACACTTCGTATGGGAAACAGGGGCAATCGCACTTTGGGGGAAGGAGGTGCTGCCCCCACCTCCCCATGCTaGTTTAACTGGTCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: TLRMGNRGNRTLGEGGAAPTSPC*FNWSVV
Trigger: GACCACAGACCAGTTAAATCAGCATGGGGAGGTGGG...GGCAGCACCTCCTTCCCCCAAAGTGCGATTGCCCCTGTTTCCCATACGAAGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp TGGAGCATTGCCAACAGCCCAGAGGGTTTCTTTGTGCCCTCTCTTGGTCACTGCCCCTGTGTGACTGCCTaGCTGAACTGCCACTTCACC +
Preference number: 4 (lower is better)
Translates to: WSIANSPEGFFVPSLGHCPCVTA*LNCHFT
Trigger: GGTGAAGTGGCAGTTCAGTCAGGCAGTCACACAGGG...GCAGTGACCAAGAGAGGGCACAAAGAAACCCTCTGGGCTGTTGGCAATGCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553588.1
CDS-3UTR GCA 90 bp GTCCTCACCAACCACTCAGAGCTGGGTGATTTGGGGGCTTGTGATGCTGGTGTGAGAGCCCAGTGTCACTaGTGCTACACACACTGCTGG +
Preference number: 4 (lower is better)
Translates to: VLTNHSELGDLGACDAGVRAQCH*CYTHCW
Trigger: CCAGCAGTGTGTGTAGCAGCAGTGACACTGGGCTCT...CACACCAGCATCACAAGCCCCCAAATCACCCAGCTCTGAGTGGTTGGTGAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR GCA 90 bp CACTGCTGCGTGAGAACCAGAGGCGACTCACAGGTCTGCTGGGCTGGTTTCAGCTGCCTCCAACTAGACTaGATCCACAGCTGCTACAGT +
Preference number: 4 (lower is better)
Translates to: HCCVRTRGDSQVCWAGFSCLQLD*IHSCYS
Trigger: ACTGTAGCAGCTGTGGATGCAGTCTAGTTGGAGGCA...GCTGAAACCAGCCCAGCAGACCTGTGAGTCGCCTCTGGTTCTCACGCAGCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp CACTGCTGCGTGAGAACCAGAGGCGACTCACAGGTCTGCTGGGCTGGTTTCAGCTGCCCTCCTCCTTGCTaGCAAAATACCCTGTCATTC +
Preference number: 4 (lower is better)
Translates to: HCCVRTRGDSQVCWAGFSCPPPC*QNTLSF
Trigger: GAATGACAGGGTATTTTGGCAGCAAGGAGGAGGGCA...GCTGAAACCAGCCCAGCAGACCTGTGAGTCGCCTCTGGTTCTCACGCAGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp CACTGCTGCGTGAGAACCAGAGGCGACTCACAGGTCTGCTGGGCTGGTTTCAGCATTAGCCAGGCATGGTaGCACACTTCCATAGTCCTC +
Preference number: 4 (lower is better)
Translates to: HCCVRTRGDSQVCWAGFSISQAW*HTSIVL
Trigger: GAGGACTATGGAAGTGTGCCACCATGCCTGGCTAAT...GCTGAAACCAGCCCAGCAGACCTGTGAGTCGCCTCTGGTTCTCACGCAGCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CAA 72 bp AACTTGAGCATGCACCAAAGACCCCTGGAGGGCTTGTaGAAGACTGCTGGGCCTTGCGCTGGGAGTTTCGGA +
Preference number: 4 (lower is better)
Translates to: NLSMHQRPLEGL*KTAGPCAGSFG
Trigger: TCCGAAACTCCCAGCGCAAGGCCCAGCAGTCTTCAACAAGCCCTCCAGGGGTCTTTGGTGCATGCTCAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp TTCTCTGCTGCAGAGGTCCTCACCAACCACTCAGAGCTGGGTGATTTGGGGGCTGGTGAACACCTTCGGTaGGAAGCATCGGCAAGAACA +
Preference number: 4 (lower is better)
Translates to: FSAAEVLTNHSELGDLGAGEHLR*EASART
Trigger: TGTTCTTGCCGATGCTTCTCACCGAAGGTGTTCACC...AGCCCCCAAATCACCCAGCTCTGAGTGGTTGGTGAGGACCTCTGCAGCAGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR TCA 90 bp CACTGCTGCGTGAGAACCAGAGGCGACTCACAGGTCTGCTGGGCTGGTTTCAGCCAGATAACCTCATTCTaGCTTCCTAGCCAGGACACA +
Preference number: 4 (lower is better)
Translates to: HCCVRTRGDSQVCWAGFSQITSF*LPSQDT
Trigger: TGTGTCCTGGCTAGGAAGTCAGAATGAGGTTATCTG...GCTGAAACCAGCCCAGCAGACCTGTGAGTCGCCTCTGGTTCTCACGCAGCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp GTCCTCACCAACCACTCAGAGCTGGGTGATTTGGGGGCTTGTGATGCTGGTGTGGGGGAGACAGGGGATTaGACTTCTGCTCCATACGTT +
Preference number: 4 (lower is better)
Translates to: VLTNHSELGDLGACDAGVGETGD*TSAPYV
Trigger: AACGTATGGAGCAGAAGTTCAATCCCCTGTCTCCCC...CACACCAGCATCACAAGCCCCCAAATCACCCAGCTCTGAGTGGTTGGTGAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR GCA 90 bp ACACTTCGTATGGGAAACAGGGGCAATCGCACTTTGGGGGAAGGAGGTGCTGCCGCAGCAGGTATGCTCTaGCAGGTGAGTGAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: TLRMGNRGNRTLGEGGAAAAGML*QVSEVR
Trigger: TCTGACTTCACTCACCTGGCAGAGCATACCTGCTGC...GGCAGCACCTCCTTCCCCCAAAGTGCGATTGCCCCTGTTTCCCATACGAAGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp GTTGCGTCTGTGGCTTTCTCTGCTGCAGAGGTCCTCACCAACCACTCAGAGCTGGCAGCAGGTATGCTCTaGCAGGTGAGTGAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: VASVAFSAAEVLTNHSELAAGML*QVSEVR
Trigger: TCTGACTTCACTCACCTGGCAGAGCATACCTGCTGC...CAGCTCTGAGTGGTTGGTGAGGACCTCTGCAGCAGAGAAAGCCACAGACGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR GCA 90 bp CCAACCACTCAGAGCTGGGTGATTTGGGGGCTTGTGATGCTGGTGTGGTTGGCTGTCTGTGGCTTTCTCTaGTGCAGAGGTCCTCACCAA +
Preference number: 4 (lower is better)
Translates to: PTTQSWVIWGLVMLVWLAVCGFL*CRGPHQ
Trigger: TTGGTGAGGACCTCTGCAGCAGAGAAAGCCACAGAC...AGCCAACCACACCAGCATCACAAGCCCCCAAATCACCCAGCTCTGAGTGGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR CCA 90 bp TCTGTGGCTTTCTCTGCTGCAGAGGTCCTCACCAACCACTCAGAGCTGGGTGATCCAACCACTCAGAGCTaGGTGATTTGGGGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: SVAFSAAEVLTNHSELGDPTTQS*VIWGLV
Trigger: CACAAGCCCCCAAATCACCCAGCTCTGAGTGGTTGG...ATCACCCAGCTCTGAGTGGTTGGTGAGGACCTCTGCAGCAGAGAAAGCCACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR CCA 90 bp ACACTTCGTATGGGAAACAGGGGCAATCGCACTTTGGGGGAAGGAGGTGCTGCCCTTGTTGAAGACTGCTaGGCCTTGCGCTGGGAGTTT +
Preference number: 4 (lower is better)
Translates to: TLRMGNRGNRTLGEGGAALVEDC*ALRWEF
Trigger: AAACTCCCAGCGCAAGGCCCAGCAGTCTTCAACAAG...GGCAGCACCTCCTTCCCCCAAAGTGCGATTGCCCCTGTTTCCCATACGAAGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp CACTGCTGCGTGAGAACCAGAGGCGACTCACAGGTCTGCTGGGCTGGTTTCAGCCCGTGGCAAAGCCTATaGTTCTCAAACTTGAGCATG +
Preference number: 4 (lower is better)
Translates to: HCCVRTRGDSQVCWAGFSPWQSL*FSNLSM
Trigger: CATGCTCAAGTTTGAGAACCATAGGCTTTGCCACGG...GCTGAAACCAGCCCAGCAGACCTGTGAGTCGCCTCTGGTTCTCACGCAGCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CAA 72 bp TCAAACTTGAGCATGCACCAAAGACCCCTGGAGGGCTaGTTGAAGACTGCTGGGCCTTGCGCTGGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: SNLSMHQRPLEG*LKTAGPCAGSF
Trigger: GAAACTCCCAGCGCAAGGCCCAGCAGTCTTCAACAAGCCCTCCAGGGGTCTTTGGTGCATGCTCAAGTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp ACACTTCGTATGGGAAACAGGGGCAATCGCACTTTGGGGGAAGGAGGTGCTGCCCTCATAGCTCCAATCTaGCACCTTCAGCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: TLRMGNRGNRTLGEGGAALIAPI*HLQLLL
Trigger: CAGCAGAAGCTGAAGGTGTCAGATTGGAGCTATGAG...GGCAGCACCTCCTTCCCCCAAAGTGCGATTGCCCCTGTTTCCCATACGAAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp ACACTTCGTATGGGAAACAGGGGCAATCGCACTTTGGGGGAAGGAGGTGCTGCCGTATGGTACCCTCTTTaGGCTGGCCGAGAAGGTAAA +
Preference number: 4 (lower is better)
Translates to: TLRMGNRGNRTLGEGGAAVWYPL*AGREGK
Trigger: TTTACCTTCTCGGCCAGCTCAAAGAGGGTACCATAC...GGCAGCACCTCCTTCCCCCAAAGTGCGATTGCCCCTGTTTCCCATACGAAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp GAGCATTGCCAACAGCCCAGAGGGTTTCTTTGTGCCCTCTCTTGGTCACTGCCCGTTTCCGCTTCCTCTTaGTGTCACGTGAACATGGTG +
Preference number: 4 (lower is better)
Translates to: EHCQQPRGFLCALSWSLPVSASS*CHVNMV
Trigger: CACCATGTTCACGTGACATCAAGAGGAAGCGGAAAC...GGGCAGTGACCAAGAGAGGGCACAAAGAAACCCTCTGGGCTGTTGGCAATGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553588.1
CDS-3UTR TCA 90 bp TTCTCTGCTGCAGAGGTCCTCACCAACCACTCAGAGCTGGGTGATTTGGGGGCTGTTTCCGCTTCCTCTTaGTGTCACGTGAACATGGTG +
Preference number: 4 (lower is better)
Translates to: FSAAEVLTNHSELGDLGAVSASS*CHVNMV
Trigger: CACCATGTTCACGTGACATCAAGAGGAAGCGGAAAC...AGCCCCCAAATCACCCAGCTCTGAGTGGTTGGTGAGGACCTCTGCAGCAGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR TCA 90 bp AGGCAAGGGTGGCCAGAGCTGTCTTGTCAGGGCACTCTCGCTGGAATACAGGCCTCATGTGGTAGCAAGTaGCTTAAACTCTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: RQGWPELSCQGTLAGIQASCGSK*LKLSQP
Trigger: AGGCTGAGAGAGTTTAAGTCACTTGCTACCACATGA...GGCCTGTATTCCAGCGAGAGTGCCCTGACAAGACAGCTCTGGCCACCCTTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556372.2
CDS-3UTR GCA 90 bp AAGTTACAGAAGACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTACGAAGCTGCCGCCTCTaGTGTCGGGGGCTCAGCGCC +
Preference number: 4 (lower is better)
Translates to: KLQKTQLRLVGLQAIDTVRSCRL*CRGLSA
Trigger: GGCGCTGAGCCCCCGACAGCAGAGGCGGCAGCTTCG...TACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGTCTTCTGTAACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR GCA 90 bp AAAGTTACAGAAGACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTCGAAGCTGCCGCCTCTaGTGTCGGGGGCTCAGCGCC +
Preference number: 4 (lower is better)
Translates to: KVTEDTAQACRFTGNRHCRSCRL*CRGLSA
Trigger: GGCGCTGAGCCCCCGACAGCAGAGGCGGCAGCTTCG...ACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGTCTTCTGTAACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR GCA 90 bp ATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAGACGGCGTTTCCGAAGCTaGCGCCTCTGCTGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: ICVCVCVCVCIHTSSFSRRRFRS*RLCCRG
Trigger: CCCCCGACAGCAGAGGCGGCAGCTTCGGAAACGCCG...TCTACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp GAGTTGGTTCTGGTGGTGAAAGGACTGGGAATGTCGATTAAGATATGCAAGACTCGGCGTTTCCGAAGCTaGCGCCTCTGCTGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: ELVLVVKGLGMSIKICKTRRFRS*RLCCRG
Trigger: CCCCCGACAGCAGAGGCGGCAGCTTCGGAAACGCCG...AGTCTTGCATATCTTAATCGACATTCCCAGTCCTTTCACCACCAGAACCAACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554375.5
ENST00000621494.1
CDS-3UTR GCA 90 bp AACACATTCCAGTTGGCTCCATTAACTTCAGGGAGTTCTGTAGCACCTCTGATTCGGCGTTTCCGAAGCTaGCGCCTCTGCTGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: NTFQLAPLTSGSSVAPLIRRFRS*RLCCRG
Trigger: CCCCCGACAGCAGAGGCGGCAGCTTCGGAAACGCCG...AATCAGAGGTGCTACAGAACTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR GCA 90 bp TCTGTGGCTTTCTCTGCTGCAGAGGTCCTCACCAACCACTCAGAGCTGGGTGATCAGCGGGACAGACGCTaGTTCTTAGCAGACTTGAAC +
Preference number: 4 (lower is better)
Translates to: SVAFSAAEVLTNHSELGDQRDRR*FLADLN
Trigger: GTTCAAGTCTGCTAAGAAGCAGCGTCTGTCCCGCTG...ATCACCCAGCTCTGAGTGGTTGGTGAGGACCTCTGCAGCAGAGAAAGCCACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR GCA 90 bp GTGAACTGCACTGGGGCTAGACAAAGATGCTGTGGCCACTGGTTTCCGCTTCCTGCCCAGTGTCACTGCTaGTACACACACTGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: VNCTGARQRCCGHWFPLPAQCHC*YTHCWF
Trigger: AAACCAGCAGTGTGTGTAGCAGCAGTGACACTGGGC...AGGAAGCGGAAACCAGTGGCCACAGCATCTTTGTCTAGCCCCAGTGCAGTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR GCA 90 bp TGGAGCATTGCCAACAGCCCAGAGGGTTTCTTTGTGCCCTCTCTTGGTCACTGCTCCCCAGTGTACATTTaGCTGTCTGGCAGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: WSIANSPEGFFVPSLGHCSPVYI*LSGRAV
Trigger: CACTGCTCTGCCAGACAGGCAAATGTACACTGGGGA...GCAGTGACCAAGAGAGGGCACAAAGAAACCCTCTGGGCTGTTGGCAATGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553588.1
CDS-3UTR GCA 90 bp GCAGAAAGCCACAGATTAAAGACAGCATTAGGTGGAGGAGCCCCTTTTGGGCACCACAGGGAAGGGAAGTaGAGCCTGGGAAGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: AESHRLKTALGGGAPFGHHREGK*SLGSPC
Trigger: ACAGGGACTTCCCAGGCTGCACTTCCCTTCCCTGTG...GTGCCCAAAAGGGGCTCCTCCACCTAATGCTGTCTTTAATCTGTGGCTTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp ACACTTCGTATGGGAAACAGGGGCAATCGCACTTTGGGGGAAGGAGGTGCTGCCGCACAATGGGCCAGTTaGAGTAGGGTTTCCACGAAT +
Preference number: 4 (lower is better)
Translates to: TLRMGNRGNRTLGEGGAAAQWAS*SRVSTN
Trigger: ATTCGTGGAAACCCTACTGCAACTGGCCCATTGTGC...GGCAGCACCTCCTTCCCCCAAAGTGCGATTGCCCCTGTTTCCCATACGAAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCAACGGCCGCCGCTTTTTaGGCCGACTCTCACCGCCGG +
Preference number: 4 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSTAAAF*ADSHRR
Trigger: CCGGCGGTGAGAGTCGGCCCAAAAAGCGGCGGCCGT...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261530.12
CDS-3UTR CCA 90 bp TGGAGGGTGAAGTCCTGCTCTCTAGCTGTATCCAGGGCTCTTTTCTTGTGGCATCCGCCTGCGCCTGAGTaGTCGACAAGGTGCATTTTC +
Preference number: 4 (lower is better)
Translates to: WRVKSCSLAVSRALFLWHPPAPE*STRCIF
Trigger: GAAAATGCACCTTGTCGACCACTCAGGCGCAGGCGG...ATGCCACAAGAAAAGAGCCCTGGATACAGCTAGAGAGCAGGACTTCACCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR CCA 90 bp TGCGTCTGTGGCTTTCTCTGCTGCAGAGGTCCTCACCAACCACTCAGAGCTGGGGGGTCACTAATGATATaGCTTATCCTCTCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: CVCGFLCCRGPHQPLRAGGSLMI*LILSVP
Trigger: GGGGACTGAGAGGATAAGCCATATCATTAGTGACCC...CCCAGCTCTGAGTGGTTGGTGAGGACCTCTGCAGCAGAGAAAGCCACAGACGCA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR CCA 90 bp GTCCTCACCAACCACTCAGAGCTGGGTGATTTGGGGGCTTGTGATGCTGGTGTGAGATGCTGTGGCCACTaGTTTCCGCTTCCTCTTGAT +
Preference number: 4 (lower is better)
Translates to: VLTNHSELGDLGACDAGVRCCGH*FPLPLD
Trigger: ATCAAGAGGAAGCGGAAACCAGTGGCCACAGCATCT...CACACCAGCATCACAAGCCCCCAAATCACCCAGCTCTGAGTGGTTGGTGAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR CCA 90 bp TCTGTGGCTTTCTCTGCTGCAGAGGTCCTCACCAACCACTCAGAGCTGGGTGATCTTGTGATGCTGGTGTaGTTGGCTCCACTGCATCCA +
Preference number: 4 (lower is better)
Translates to: SVAFSAAEVLTNHSELGDLVMLV*LAPLHP
Trigger: TGGATGCAGTGGAGCCAACCACACCAGCATCACAAG...ATCACCCAGCTCTGAGTGGTTGGTGAGGACCTCTGCAGCAGAGAAAGCCACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR CCA 90 bp ACACTTCGTATGGGAAACAGGGGCAATCGCACTTTGGGGGAAGGAGGTGCTGCCGCTGAGGCAGGAGGATaGCTTGAGCTTATGAGTTCA +
Preference number: 4 (lower is better)
Translates to: TLRMGNRGNRTLGEGGAAAEAGG*LELMSS
Trigger: TGAACTCATAAGCTCAAGCCATCCTCCTGCCTCAGC...GGCAGCACCTCCTTCCCCCAAAGTGCGATTGCCCCTGTTTCCCATACGAAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp AAGCAGATGCATGAGTGGGAGTCCCTCTACAATGTGACCAGAGCAGGGAGCACTAAAAGGGGTTCGTCTTaGGCAGGACAGGCACTGGCA +
Preference number: 4 (lower is better)
Translates to: KQMHEWESLYNVTRAGSTKRGSS*AGQALA
Trigger: TGCCAGTGCCTGTCCTGCCCAAGACGAACCCCTTTT...AGTGCTCCCTGCTCTGGTCACATTGTAGAGGGACTCCCACTCATGCATCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp CCAGAGCTGTCTTGTCAGGGCACTCTCGCTGGAATACAGGCCTCCGAGTGTTGTCCAACAATGACCAGCTaGGAAAAGGCTGGAGAACTC +
Preference number: 4 (lower is better)
Translates to: PELSCQGTLAGIQASECCPTMTS*EKAGEL
Trigger: GAGTTCTCCAGCCTTTTCCCAGCTGGTCATTGTTGG...ACAACACTCGGAGGCCTGTATTCCAGCGAGAGTGCCCTGACAAGACAGCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556372.2
CDS-3UTR TCA 90 bp GTGCTGGTGAACACCTTCGGTGAGAAGCATCGGCAAGAACATCCAGGGAGTAAAGTATGCTCTGCCAGGTaGGTGAAGTCAGAACGACGC +
Preference number: 4 (lower is better)
Translates to: VLVNTFGEKHRQEHPGSKVCSAR*VKSERR
Trigger: GCGTCGTTCTGACTTCACTCACCTGGCAGAGCATAC...TTTACTCCCTGGATGTTCTTGCCGATGCTTCTCACCGAAGGTGTTCACCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR TCA 90 bp CTCTTGATGTCACGTGAACATGGTGGTCCCCAGTGTACATTTGCCTGTCTGGCAGCTAGCAGCCACCTCTaGTGTCACTCGCTTCACCTT +
Preference number: 4 (lower is better)
Translates to: LLMSREHGGPQCTFACLAASSHL*CHSLHL
Trigger: AAGGTGAAGCGAGTGACATCAGAGGTGGCTGCTAGC...TGCCAGACAGGCAAATGTACACTGGGGACCACCATGTTCACGTGACATCAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR TCA 90 bp TCTGTGGCTTTCTCTGCTGCAGAGGTCCTCACCAACCACTCAGAGCTGGGTGATTCTACTTCAGAACAATaGTCAGGAGCCCACTTGGGC +
Preference number: 4 (lower is better)
Translates to: SVAFSAAEVLTNHSELGDSTSEQ*SGAHLG
Trigger: GCCCAAGTGGGCTCCTGATCATTGTTCTGAAGTAGA...ATCACCCAGCTCTGAGTGGTTGGTGAGGACCTCTGCAGCAGAGAAAGCCACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR TCA 90 bp AAGCAGATGCATGAGTGGGAGTCCCTCTACAATGTGACCAGAGCAGGGAGCACTGGTGAACACCTTCGGTaGGAAGCATCGGCAAGAACA +
Preference number: 4 (lower is better)
Translates to: KQMHEWESLYNVTRAGSTGEHLR*EASART
Trigger: TGTTCTTGCCGATGCTTCTCACCGAAGGTGTTCACC...AGTGCTCCCTGCTCTGGTCACATTGTAGAGGGACTCCCACTCATGCATCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp AAGCAGATGCATGAGTGGGAGTCCCTCTACAATGTGACCAGAGCAGGGAGCACTTGTCAGCTAGGCCCCTaGATGAATGACAGACACTCC +
Preference number: 4 (lower is better)
Translates to: KQMHEWESLYNVTRAGSTCQLGP*MNDRHS
Trigger: GGAGTGTCTGTCATTCATTCAGGGGCCTAGCTGACA...AGTGCTCCCTGCTCTGGTCACATTGTAGAGGGACTCCCACTCATGCATCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp ACACTTCGTATGGGAAACAGGGGCAATCGCACTTTGGGGGAAGGAGGTGCTGCCTATGGTTCTCAAACTTaGGCATGCACCAAAGACCCC +
Preference number: 4 (lower is better)
Translates to: TLRMGNRGNRTLGEGGAAYGSQT*ACTKDP
Trigger: GGGGTCTTTGGTGCATGCTCAAGTTTGAGAACCATA...GGCAGCACCTCCTTCCCCCAAAGTGCGATTGCCCCTGTTTCCCATACGAAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp CACTGCTGCGTGAGAACCAGAGGCGACTCACAGGTCTGCTGGGCTGGTTTCAGCATAAGTAAACAGGAGTaGCCCACCTTAGAATCTCAC +
Preference number: 4 (lower is better)
Translates to: HCCVRTRGDSQVCWAGFSISKQE*PTLESH
Trigger: GTGAGATTCTAAGGTGGGTCACTCCTGTTTACTTAT...GCTGAAACCAGCCCAGCAGACCTGTGAGTCGCCTCTGGTTCTCACGCAGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp AAGTTACAGAAGACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTACGGCGTTTCCGAAGCTaGCGCCTCTGCTGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: KLQKTQLRLVGLQAIDTVRRFRS*RLCCRG
Trigger: CCCCCGACAGCAGAGGCGGCAGCTTCGGAAACGCCG...TACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGTCTTCTGTAACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR GCA 90 bp GATGCTGTGGCCACTGGTTTCCGCTTCCTCTTGATGTCACGTGAACATGGTGGTTCCCCAGTGTACATTTaGCTGTCTGGCAGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: DAVATGFRFLLMSREHGGSPVYI*LSGRAV
Trigger: CACTGCTCTGCCAGACAGGCAAATGTACACTGGGGA...ACCACCATGTTCACGTGACATCAAGAGGAAGCGGAAACCAGTGGCCACAGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR GCA 90 bp GCAGAAAGCCACAGATTAAAGACAGCATTAGGTGGAGGAGCCCCTTTTGGGCACGGGGCTAGACAAAGATaGTGTGGCCACTGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: AESHRLKTALGGGAPFGHGARQR*CGHWFP
Trigger: CGGAAACCAGTGGCCACAGCATCTTTGTCTAGCCCC...GTGCCCAAAAGGGGCTCCTCCACCTAATGCTGTCTTTAATCTGTGGCTTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp GCAGAAAGCCACAGATTAAAGACAGCATTAGGTGGAGGAGCCCCTTTTGGGCACGGGGGAAGGAGGTGCTaGCCCATTCAGCACCTATTT +
Preference number: 4 (lower is better)
Translates to: AESHRLKTALGGGAPFGHGGRRC*PIQHLF
Trigger: AAATAGGTGCTGAATGGGGCAGCACCTCCTTCCCCC...GTGCCCAAAAGGGGCTCCTCCACCTAATGCTGTCTTTAATCTGTGGCTTTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp CTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGACGGCCGCCGCTTTTTaGGCCGACTCTCACCGCCGG +
Preference number: 4 (lower is better)
Translates to: LNHLLHYTNLCVCVCVCVTAAAF*ADSHRR
Trigger: CCGGCGGTGAGAGTCGGCCCAAAAAGCGGCGGCCGT...CACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000312858.9
CDS-3UTR CCA 90 bp AAGTTACAGAAGACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTAACGGCCGCCGCTTTTTaGGCCGACTCTCACCGCCGG +
Preference number: 4 (lower is better)
Translates to: KLQKTQLRLVGLQAIDTVTAAAF*ADSHRR
Trigger: CCGGCGGTGAGAGTCGGCCCAAAAAGCGGCGGCCGT...TACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGTCTTCTGTAACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557263.5
CDS-3UTR CCA 90 bp GAAAGTGGAACCCCAAGTTTCACTGTATTCATAGGGCTAGTGCTGATGCCCCAACCAGGAGCCTTCGCCTaGAGCCAAAGTGGAGAACCC +
Preference number: 4 (lower is better)
Translates to: ESGTPSFTVFIGLVLMPQPGAFA*SQSGEP
Trigger: GGGTTCTCCACTTTGGCTCCAGGCGAAGGCTCCTGG...TTGGGGCATCAGCACTAGCCCTATGAATACAGTGAAACTTGGGGTTCCACTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp ACACTTCGTATGGGAAACAGGGGCAATCGCACTTTGGGGGAAGGAGGTGCTGCCCCATGCTTTTACCCTTaGAGGGCTTCATCCACTCTT +
Preference number: 4 (lower is better)
Translates to: TLRMGNRGNRTLGEGGAAPCFYP*RASSTL
Trigger: AAGAGTGGATGAAGCCCTCCAAGGGTAAAAGCATGG...GGCAGCACCTCCTTCCCCCAAAGTGCGATTGCCCCTGTTTCCCATACGAAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CAA 72 bp GACAAAGATGCTGTGGCCACTGGTTTCCGCTTCCTCTaGATGTCACGTGAACATGGTGGTCCCCAGTGTACA +
Preference number: 4 (lower is better)
Translates to: DKDAVATGFRFL*MSREHGGPQCT
Trigger: TGTACACTGGGGACCACCATGTTCACGTGACATCAAGAGGAAGCGGAAACCAGTGGCCACAGCATCTTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR TCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCGTACCAGCTCATCCATaGGGCCACATCAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: CKSVHISVPALYAQWASCVPAHP*GHISCR
Trigger: GCGGCAGCTGATGTGGCCTCATGGATGAGCTGGTAC...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261530.12
CDS-3UTR TCA 90 bp CTTGTAAACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGTTCTGTCCTTCCGCCTGCGCCTaGGTGGTCGACAAGGTGCAT +
Preference number: 4 (lower is better)
Translates to: LVNSQHIPVGSINFREFCPSACA*VVDKVH
Trigger: ATGCACCTTGTCGACCACTCAGGCGCAGGCGGAAGG...ACAGAACTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTTTACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR TCA 90 bp TTCACTCTTGTAAACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGCCTTCCGCCTGCGCCTaGGTGGTCGACAAGGTGCAT +
Preference number: 4 (lower is better)
Translates to: FTLVNSQHIPVGSINFREPSACA*VVDKVH
Trigger: ATGCACCTTGTCGACCACTCAGGCGCAGGCGGAAGG...CTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTTTACAAGAGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR TCA 90 bp GGTTTCCGCTTCCTCTTGATGTCACGTGAACATGGTGGTCCCCAGTGTACATTTACCTTCAGCTTCTGCTaGAGGCTAGCAGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: GFRFLLMSREHGGPQCTFTFSFC*RLAATS
Trigger: AGAGGTGGCTGCTAGCCTTCAGCAGAAGCTGAAGGT...AAATGTACACTGGGGACCACCATGTTCACGTGACATCAAGAGGAAGCGGAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR TCA 90 bp AACATCCAGGGAGTAAAGGGGAGACAGGGGATTGAACTTCTGCTCCATACGTTTTTCTTCGCCCCTTTCTaGGGCATCGAGCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: NIQGVKGRQGIELLLHTFFFAPF*GIELQL
Trigger: GAGCTGCAGCTCGATGCCTCAGAAAGGGGCGAAGAA...AAACGTATGGAGCAGAAGTTCAATCCCCTGTCTCCCCTTTACTCCCTGGATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR TCA 90 bp AACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGTTCTGTAGCACCTTCTTCGCCCCTTTCTaGGGCATCGAGCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: NSQHIPVGSINFREFCSTFFAPF*GIELQL
Trigger: GAGCTGCAGCTCGATGCCTCAGAAAGGGGCGAAGAA...GGTGCTACAGAACTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR TCA 90 bp CCAAGTTCATCATATGGAGCATTGCCAACAGCCCAGAGGGTTTCTTTGTGCCCTCCTCTTGATGTCACGTaGACATGGTGGTCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: PSSSYGALPTAQRVSLCPPLDVT*TWWSPV
Trigger: CACTGGGGACCACCATGTTCACGTGACATCAAGAGG...AGGGCACAAAGAAACCCTCTGGGCTGTTGGCAATGCTCCATATGATGAACTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553588.1
CDS-3UTR TCA 90 bp GGCTCAAAGGCAAGCCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTACACACACTGCTGCATaGGAGCCAGGGGTGACTCAG +
Preference number: 4 (lower is better)
Translates to: GSKASLISCEHNSIQVSTTHTAA*EPGVTQ
Trigger: CTGAGTCACCCCTGGCTCTCATGCAGCAGTGTGTGT...AGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGGCTTGCCTTTGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp CAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTACCCTGGAGGGCTTGTTaGAGACTGCTGGGCCTTGCG +
Preference number: 4 (lower is better)
Translates to: QSVCVCVCVCVYTRPLSVPWRAC*RLLGLA
Trigger: CGCAAGGCCCAGCAGTCTTCAACAAGCCCTCCAGGG...TACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp AACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGTTCTGTAGCACCGTACCAGCTCATCCATaGGGCCACATCTCCAACGGC +
Preference number: 4 (lower is better)
Translates to: NSQHIPVGSINFREFCSTVPAHP*GHISNG
Trigger: GCCGTTGGAGATGTGGCCTCATGGATGAGCTGGTAC...GGTGCTACAGAACTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557263.5
CDS-3UTR GCA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGCGGCGTTTCCGAAGCTaGCGCCTCTGCTGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVRRFRS*RLCCRG
Trigger: CCCCCGACAGCAGAGGCGGCAGCTTCGGAAACGCCG...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp TTCTCTGCTGCAGAGGTCCTCACCAACCACTCAGAGCTGGGTGATTTGGGGGCTGAGTGGTCGACAAGGTaGATTTTCAGTAAAGGAGTC +
Preference number: 4 (lower is better)
Translates to: FSAAEVLTNHSELGDLGAEWSTR*IFSKGV
Trigger: GACTCCTTTACTGAAAATGCACCTTGTCGACCACTC...AGCCCCCAAATCACCCAGCTCTGAGTGGTTGGTGAGGACCTCTGCAGCAGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR GCA 90 bp GCCAGGGTTAAAAACCACTGCCTCGGTAGACTGCAGAATGGACAGAGTGCAGATCAGCGGGACAGACGCTaGTTCTTAGCAGACTTGAAC +
Preference number: 4 (lower is better)
Translates to: ARVKNHCLGRLQNGQSADQRDRR*FLADLN
Trigger: GTTCAAGTCTGCTAAGAAGCAGCGTCTGTCCCGCTG...ATCTGCACTCTGTCCATTCTGCAGTCTACCGAGGCAGTGGTTTTTAACCCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp CCAAGTTCATCATATGGAGCATTGCCAACAGCCCAGAGGGTTTCTTTGTGCCCTGGGGCTAGACAAAGATaGTGTGGCCACTGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: PSSSYGALPTAQRVSLCPGARQR*CGHWFP
Trigger: CGGAAACCAGTGGCCACAGCATCTTTGTCTAGCCCC...AGGGCACAAAGAAACCCTCTGGGCTGTTGGCAATGCTCCATATGATGAACTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553588.1
CDS-3UTR GCA 90 bp GTGCTGGTGAACACCTTCGGTGAGAAGCATCGGCAAGAACATCCAGGGAGTAAATGGAGGGTGAAGTCCTaGTCTCTAGCTGTATCCAGG +
Preference number: 4 (lower is better)
Translates to: VLVNTFGEKHRQEHPGSKWRVKS*SLAVSR
Trigger: CCTGGATACAGCTAGAGAGCAGGACTTCACCCTCCA...TTTACTCCCTGGATGTTCTTGCCGATGCTTCTCACCGAAGGTGTTCACCAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR GCA 90 bp GGCTCAAAGGCAAGCCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTTCACCCAGGCTGGAGTaGAGTGGCCAGATCATGGCT +
Preference number: 4 (lower is better)
Translates to: GSKASLISCEHNSIQVSTSPRLE*SGQIMA
Trigger: AGCCATGATCTGGCCACTGCACTCCAGCCTGGGTGA...AGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGGCTTGCCTTTGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp GCCAGGGTTAAAAACCACTGCCTCGGTAGACTGCAGAATGGACAGAGTGCAGATGAGCCCATTCACAGTTaGCTGGTAGAGAAACAGCCC +
Preference number: 4 (lower is better)
Translates to: ARVKNHCLGRLQNGQSADEPIHS*LVEKQP
Trigger: GGGCTGTTTCTCTACCAGGCAACTGTGAATGGGCTC...ATCTGCACTCTGTCCATTCTGCAGTCTACCGAGGCAGTGGTTTTTAACCCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp GCAGAAAGCCACAGATTAAAGACAGCATTAGGTGGAGGAGCCCCTTTTGGGCACGATTCACACAATCCGTaGCCTGATGAGGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: AESHRLKTALGGGAPFGHDSHNP*PDEVQG
Trigger: TCCCTGGACCTCATCAGGCCACGGATTGTGTGAATC...GTGCCCAAAAGGGGCTCCTCCACCTAATGCTGTCTTTAATCTGTGGCTTTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp TGGAGGGTGAAGTCCTGCTCTCTAGCTGTATCCAGGGCTCTTTTCTTGTGGCATGTACATTTGCCTGTCTaGCAGAGCAGTGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: WRVKSCSLAVSRALFLWHVHLPV*QSSVLV
Trigger: CACCAGCACACTGCTCTGCCAGACAGGCAAATGTAC...ATGCCACAAGAAAAGAGCCCTGGATACAGCTAGAGAGCAGGACTTCACCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR CCA 90 bp GCAGAAAGCCACAGATTAAAGACAGCATTAGGTGGAGGAGCCCCTTTTGGGCACCTTGTGATGCTGGTGTaGTTGGCTCCACTGCATCCA +
Preference number: 4 (lower is better)
Translates to: AESHRLKTALGGGAPFGHLVMLV*LAPLHP
Trigger: TGGATGCAGTGGAGCCAACCACACCAGCATCACAAG...GTGCCCAAAAGGGGCTCCTCCACCTAATGCTGTCTTTAATCTGTGGCTTTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp GAGTTGGTTCTGGTGGTGAAAGGACTGGGAATGTCGATTAAGATATGCAAGACTGGGGCAATCGCACTTTaGGGGAAGGAGGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: ELVLVVKGLGMSIKICKTGAIAL*GKEVLP
Trigger: GGGCAGCACCTCCTTCCCCCAAAGTGCGATTGCCCC...AGTCTTGCATATCTTAATCGACATTCCCAGTCCTTTCACCACCAGAACCAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp GCAGAAAGCCACAGATTAAAGACAGCATTAGGTGGAGGAGCCCCTTTTGGGCACTGGATTTCTGGGCTCTaGCAACCAGTTAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: AESHRLKTALGGGAPFGHWISGL*QPVRTQ
Trigger: CTGGGTCCTAACTGGTTGCCAGAGCCCAGAAATCCA...GTGCCCAAAAGGGGCTCCTCCACCTAATGCTGTCTTTAATCTGTGGCTTTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp GGCTCAAAGGCAAGCCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTGGGCAGGACAGGCACTaGCAAGAAGGTAAGGAAGCG +
Preference number: 4 (lower is better)
Translates to: GSKASLISCEHNSIQVSTGQDRH*QEGKEA
Trigger: CGCTTCCTTACCTTCTTGCCAGTGCCTGTCCTGCCC...AGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGGCTTGCCTTTGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCAGGTCTCATCAGACACTaGCCCATGGCCCAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSGLIRH*PMAQWP
Trigger: GGGCCACTGGGCCATGGGCCAGTGTCTGATGAGACC...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp ACTCAGGCTTTCAAAGGGTTGAGGAAAGGTCTTTTGTTTGAAGGAAGGAGTATCCCTTCCGCCTGCGCCTaGGTGGTCGACAAGGTGCAT +
Preference number: 4 (lower is better)
Translates to: TQAFKGLRKGLLFEGRSIPSACA*VVDKVH
Trigger: ATGCACCTTGTCGACCACTCAGGCGCAGGCGGAAGG...GATACTCCTTCCTTCAAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp AACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGTTCTGTAGCACCGCTAGCAGCCACCTCTaGTGTCACTCGCTTCACCTT +
Preference number: 4 (lower is better)
Translates to: NSQHIPVGSINFREFCSTASSHL*CHSLHL
Trigger: AAGGTGAAGCGAGTGACATCAGAGGTGGCTGCTAGC...GGTGCTACAGAACTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR TCA 90 bp GTGCTGGTGAACACCTTCGGTGAGAAGCATCGGCAAGAACATCCAGGGAGTAAAGTATGGTACCCTCTTTaGGCTGGCCGAGAAGGTAAA +
Preference number: 4 (lower is better)
Translates to: VLVNTFGEKHRQEHPGSKVWYPL*AGREGK
Trigger: TTTACCTTCTCGGCCAGCTCAAAGAGGGTACCATAC...TTTACTCCCTGGATGTTCTTGCCGATGCTTCTCACCGAAGGTGTTCACCAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR TCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCTTCTTCGCCCCTTTCTaGGGCATCGAGCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: CKSVHISVPALYAQWASCFFAPF*GIELQL
Trigger: GAGCTGCAGCTCGATGCCTCAGAAAGGGGCGAAGAA...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp CCAAGTTCATCATATGGAGCATTGCCAACAGCCCAGAGGGTTTCTTTGTGCCCTGGTGAACACCTTCGGTaGGAAGCATCGGCAAGAACA +
Preference number: 4 (lower is better)
Translates to: PSSSYGALPTAQRVSLCPGEHLR*EASART
Trigger: TGTTCTTGCCGATGCTTCTCACCGAAGGTGTTCACC...AGGGCACAAAGAAACCCTCTGGGCTGTTGGCAATGCTCCATATGATGAACTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553588.1
CDS-3UTR TCA 90 bp GAAAGTGGAACCCCAAGTTTCACTGTATTCATAGGGCTAGTGCTGATGCCCCAACCTCTTGATGTCACGTaGACATGGTGGTCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: ESGTPSFTVFIGLVLMPQPLDVT*TWWSPV
Trigger: CACTGGGGACCACCATGTTCACGTGACATCAAGAGG...TTGGGGCATCAGCACTAGCCCTATGAATACAGTGAAACTTGGGGTTCCACTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp GCAGAAAGCCACAGATTAAAGACAGCATTAGGTGGAGGAGCCCCTTTTGGGCACGTTTCCGCTTCCTCTTaGTGTCACGTGAACATGGTG +
Preference number: 4 (lower is better)
Translates to: AESHRLKTALGGGAPFGHVSASS*CHVNMV
Trigger: CACCATGTTCACGTGACATCAAGAGGAAGCGGAAAC...GTGCCCAAAAGGGGCTCCTCCACCTAATGCTGTCTTTAATCTGTGGCTTTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp CACTGCTGCGTGAGAACCAGAGGCGACTCACAGGTCTGCTGGGCTGGTTTCAGCAAGATTCCCACAACATaGTCTTCTGAGAGAAAGAAT +
Preference number: 4 (lower is better)
Translates to: HCCVRTRGDSQVCWAGFSKIPTT*SSERKN
Trigger: ATTCTTTCTCTCAGAAGATCATGTTGTGGGAATCTT...GCTGAAACCAGCCCAGCAGACCTGTGAGTCGCCTCTGGTTCTCACGCAGCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp ACACTTCGTATGGGAAACAGGGGCAATCGCACTTTGGGGGAAGGAGGTGCTGCCGCATTTAGTTCTGAGTaGTGGAACTCACCATTTTCC +
Preference number: 4 (lower is better)
Translates to: TLRMGNRGNRTLGEGGAAAFSSE*WNSPFS
Trigger: GGAAAATGGTGAGTTCCATCACTCAGAACTAAATGC...GGCAGCACCTCCTTCCCCCAAAGTGCGATTGCCCCTGTTTCCCATACGAAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp GGCTCAAAGGCAAGCCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTTCCCTAAGAGGTCCCTaGGGAGGACTTCGCTTCATC +
Preference number: 4 (lower is better)
Translates to: GSKASLISCEHNSIQVSTSLRGP*GGLRFI
Trigger: GATGAAGCGAAGTCCTCCTCAGGGACCTCTTAGGGA...AGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGGCTTGCCTTTGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp GGCTCAAAGGCAAGCCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTCGCACAGAGAAGGGATaGGCCCATTCACAGTTGCCT +
Preference number: 4 (lower is better)
Translates to: GSKASLISCEHNSIQVSTRTEKG*AHSQLP
Trigger: AGGCAACTGTGAATGGGCTCATCCCTTCTCTGTGCG...AGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGGCTTGCCTTTGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp GGCTCAAAGGCAAGCCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTTGGATCAAGAGCCCCTaGGAATGTGAAGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: GSKASLISCEHNSIQVSTWIKSP*ECEEGA
Trigger: AGCCCCCTCTTCACATTCTCAGGGGCTCTTGATCCA...AGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGGCTTGCCTTTGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261530.12
CDS-3UTR TCA 90 bp CCAGAGCTGTCTTGTCAGGGCACTCTCGCTGGAATACAGGCCTCCGAGTGTTGTTCATCCATTTCATCTTaGGAACTCCTACTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PELSCQGTLAGIQASECCSSISS*ELLLAP
Trigger: AGGAGCAAGTAGGAGTTCTCAAGATGAAATGGATGA...ACAACACTCGGAGGCCTGTATTCCAGCGAGAGTGCCCTGACAAGACAGCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556372.2
CDS-3UTR GCA 90 bp GTCAGCTCCTGGAGGGTGAAGTCCTGCTCTCTAGCTGTATCCAGGGCTCTTTTCTCACCAAGCTTATTCTaGTCAGATGTCTGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: VSSWRVKSCSLAVSRALFSPSLF*SDVCSK
Trigger: CTTGGAGCAGACATCTGAGCAGAATAAGCTTGGTGA...GAAAAGAGCCCTGGATACAGCTAGAGAGCAGGACTTCACCCTCCAGGAGCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR GCA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTCGGCGTTTCCGAAGCTaGCGCCTCTGCTGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCRRFRS*RLCCRG
Trigger: CCCCCGACAGCAGAGGCGGCAGCTTCGGAAACGCCG...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp GAAAGTGGAACCCCAAGTTTCACTGTATTCATAGGGCTAGTGCTGATGCCCCAAAGAGCCCAGTGTCACTaGTGCTACACACACTGCTGG +
Preference number: 4 (lower is better)
Translates to: ESGTPSFTVFIGLVLMPQRAQCH*CYTHCW
Trigger: CCAGCAGTGTGTGTAGCAGCAGTGACACTGGGCTCT...TTGGGGCATCAGCACTAGCCCTATGAATACAGTGAAACTTGGGGTTCCACTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp AAGCAGATGCATGAGTGGGAGTCCCTCTACAATGTGACCAGAGCAGGGAGCACTTCCCCAAAGTGTTTATaGTGGTCTCCTTCCCAACCA +
Preference number: 4 (lower is better)
Translates to: KQMHEWESLYNVTRAGSTSPKCL*WSPSQP
Trigger: TGGTTGGGAAGGAGACCAGCATAAACACTTTGGGGA...AGTGCTCCCTGCTCTGGTCACATTGTAGAGGGACTCCCACTCATGCATCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp AATGAAATCAATGCTATGATGAGCCTGTCCCAGCTCTGCCGCAACCTACTCATGGGGGCTAGACAAAGATaGTGTGGCCACTGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: NEINAMMSLSQLCRNLLMGARQR*CGHWFP
Trigger: CGGAAACCAGTGGCCACAGCATCTTTGTCTAGCCCC...CATGAGTAGGTTGCGGCAGAGCTGGGACAGGCTCATCATAGCATTGATTTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556372.2
CDS-3UTR GCA 90 bp ACACTTCGTATGGGAAACAGGGGCAATCGCACTTTGGGGGAAGGAGGTGCTGCCCAGAGACCTTTAATATaGTTTCCTAGAAGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: TLRMGNRGNRTLGEGGAAQRPLI*FPRSLQ
Trigger: CTGCAGGCTTCTAGGAAAGCATATTAAAGGTCTCTG...GGCAGCACCTCCTTCCCCCAAAGTGCGATTGCCCCTGTTTCCCATACGAAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp GCAGAAAGCCACAGATTAAAGACAGCATTAGGTGGAGGAGCCCCTTTTGGGCACCCAAAGTGTTTATGCTaGTCTCCTTCCCAACCAGCC +
Preference number: 4 (lower is better)
Translates to: AESHRLKTALGGGAPFGHPKCLC*SPSQPA
Trigger: GGCTGGTTGGGAAGGAGACCAGCATAAACACTTTGG...GTGCCCAAAAGGGGCTCCTCCACCTAATGCTGTCTTTAATCTGTGGCTTTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp TGGAGGGTGAAGTCCTGCTCTCTAGCTGTATCCAGGGCTCTTTTCTTGTGGCATCCAAAGTGTTTATGCTaGTCTCCTTCCCAACCAGCC +
Preference number: 4 (lower is better)
Translates to: WRVKSCSLAVSRALFLWHPKCLC*SPSQPA
Trigger: GGCTGGTTGGGAAGGAGACCAGCATAAACACTTTGG...ATGCCACAAGAAAAGAGCCCTGGATACAGCTAGAGAGCAGGACTTCACCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR CCA 90 bp GCAGAAAGCCACAGATTAAAGACAGCATTAGGTGGAGGAGCCCCTTTTGGGCACATTAGCCAGGCATGGTaGCACACTTCCATAGTCCTC +
Preference number: 4 (lower is better)
Translates to: AESHRLKTALGGGAPFGHISQAW*HTSIVL
Trigger: GAGGACTATGGAAGTGTGCCACCATGCCTGGCTAAT...GTGCCCAAAAGGGGCTCCTCCACCTAATGCTGTCTTTAATCTGTGGCTTTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCGGGCAGGACAGGCACTaGCAAGAAGGTAAGGAAGCG +
Preference number: 4 (lower is better)
Translates to: CKSVHISVPALYAQWASCGQDRH*QEGKEA
Trigger: CGCTTCCTTACCTTCTTGCCAGTGCCTGTCCTGCCC...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp GAAAGTGGAACCCCAAGTTTCACTGTATTCATAGGGCTAGTGCTGATGCCCCAAAAAAGGGGTTCGTCTTaGGCAGGACAGGCACTGGCA +
Preference number: 4 (lower is better)
Translates to: ESGTPSFTVFIGLVLMPQKRGSS*AGQALA
Trigger: TGCCAGTGCCTGTCCTGCCCAAGACGAACCCCTTTT...TTGGGGCATCAGCACTAGCCCTATGAATACAGTGAAACTTGGGGTTCCACTTTC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp ATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAGATCAGACACTGGCCCATaGCCCAGTGGCCCACAGCTT +
Preference number: 4 (lower is better)
Translates to: ICVCVCVCVCIHTSSFSRSDTGP*PSGPQL
Trigger: AAGCTGTGGGCCACTGGGCCATGGGCCAGTGTCTGA...TCTACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp CTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGGGTCTCATCAGACACTaGCCCATGGCCCAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: LNHLLHYTNLCVCVCVCVGLIRH*PMAQWP
Trigger: GGGCCACTGGGCCATGGGCCAGTGTCTGATGAGACC...CACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp GGGAATGATAACCATACCGGTCTCATGGGTCATCCATTTCATCTTGAGAACTCCTCAGGGCACTCTCGCTaGAATACAGGCCTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: GNDNHTGLMGHPFHLENSSGHSR*NTGLRV
Trigger: CACTCGGAGGCCTGTATTCCAGCGAGAGTGCCCTGA...GGAGTTCTCAAGATGAAATGGATGACCCATGAGACCGGTATGGTTATCATTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556372.2
CDS-3UTR TCA 90 bp ATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAGAGCTCTGCCAGGTGAGTaGAGTCAGAACGACGCTTCC +
Preference number: 4 (lower is better)
Translates to: ICVCVCVCVCIHTSSFSRALPGE*SQNDAS
Trigger: GGAAGCGTCGTTCTGACTTCACTCACCTGGCAGAGC...TCTACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR TCA 90 bp CAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAGCTCTGCCAGGTGAGTaGAGTCAGAACGACGCTTCC +
Preference number: 4 (lower is better)
Translates to: QSVCVCVCVCVYTRPLSVALPGE*SQNDAS
Trigger: GGAAGCGTCGTTCTGACTTCACTCACCTGGCAGAGC...TACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR TCA 90 bp CTTGTAAACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGTTCTGTGGCCTCATCCAGACTTaGCTCAGAGGCCTCGCTGTA +
Preference number: 4 (lower is better)
Translates to: LVNSQHIPVGSINFREFCGLIQT*LRGLAV
Trigger: TACAGCGAGGCCTCTGAGTCAAGTCTGGATGAGGCC...ACAGAACTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTTTACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR TCA 90 bp CAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAGGCCTCATCCAGACTTaGCTCAGAGGCCTCGCTGTA +
Preference number: 4 (lower is better)
Translates to: QSVCVCVCVCVYTRPLSVGLIQT*LRGLAV
Trigger: TACAGCGAGGCCTCTGAGTCAAGTCTGGATGAGGCC...TACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR TCA 90 bp ACAGAAGACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTAATGACTTCTTCGCCCCTTTCTaGGGCATCGAGCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: TEDTAQACRFTGNRHCNDFFAPF*GIELQL
Trigger: GAGCTGCAGCTCGATGCCTCAGAAAGGGGCGAAGAA...GTCATTACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGTCTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR TCA 90 bp AGTGGCCCACAGCTTATGCATATGTACATGCCCTCCAACAGTTCAGTTTGTAAAACACACACTGCTGCATaGGAGCCAGGGGTGACTCAG +
Preference number: 4 (lower is better)
Translates to: SGPQLMHMYMPSNSSVCKTHTAA*EPGVTQ
Trigger: CTGAGTCACCCCTGGCTCTCATGCAGCAGTGTGTGT...TTTACAAACTGAACTGTTGGAGGGCATGTACATATGCATAAGCTGTGGGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp GCAGAAAGCCACAGATTAAAGACAGCATTAGGTGGAGGAGCCCCTTTTGGGCACAGACATATAGGGCACTaGACACAGCTTCTAACGCTG +
Preference number: 4 (lower is better)
Translates to: AESHRLKTALGGGAPFGHRHIGH*TQLLTL
Trigger: CAGCGTTAGAAGCTGTGTTCAGTGCCCTATATGTCT...GTGCCCAAAAGGGGCTCCTCCACCTAATGCTGTCTTTAATCTGTGGCTTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCCCTCCAACCATCGCATaGACCATGACGTCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: CKSVHISVPALYAQWASCPPTIA*TMTSSK
Trigger: CTTGGAGGACGTCATGGTTCATGCGATGGTTGGAGG...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp ACACTTCGTATGGGAAACAGGGGCAATCGCACTTTGGGGGAAGGAGGTGCTGCCTTTACCAAGCATTTATaGTGTCTACTCGCAGTGACA +
Preference number: 4 (lower is better)
Translates to: TLRMGNRGNRTLGEGGAAFTKHL*CLLAVT
Trigger: TGTCACTGCGAGTAGACATCATAAATGCTTGGTAAA...GGCAGCACCTCCTTCCCCCAAAGTGCGATTGCCCCTGTTTCCCATACGAAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp GGCTCAAAGGCAAGCCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTTGGCTGTCCAGCATCTaGAGTACCTTCCCATGTGTG +
Preference number: 4 (lower is better)
Translates to: GSKASLISCEHNSIQVSTWLSSI*STFPCV
Trigger: CACACATGGGAAGGTACTTCAGATGCTGGACAGCCA...AGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGGCTTGCCTTTGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp ACACTTCGTATGGGAAACAGGGGCAATCGCACTTTGGGGGAAGGAGGTGCTGCCAGAAACATTATCTCGTaGGTCACACCCTTTAGCATT +
Preference number: 4 (lower is better)
Translates to: TLRMGNRGNRTLGEGGAARNIIS*VTPFSI
Trigger: AATGCTAAAGGGTGTGACTCACGAGATAATGTTTCT...GGCAGCACCTCCTTCCCCCAAAGTGCGATTGCCCCTGTTTCCCATACGAAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp CTCATGGGTCATCCATTTCATCTTGAGAACTCCTACTTGCTCCTTAGCTTTCACGAGAACTCACGAAACTaGCGGGAAGGTGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LMGHPFHLENSYLLLSFHENSRN*REGGGA
Trigger: GGCTCCTCCACCTTCCCGTCAGTTTCGTGAGTTCTC...GTGAAAGCTAAGGAGCAAGTAGGAGTTCTCAAGATGAAATGGATGACCCATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556372.2
CDS-3UTR GCA 90 bp AGAAGCATCGGCAAGAACATCCAGGGAGTAAAGGGGAGACAGGGGATTGAACTTTTCTGCTCAGATGTCTaGTCCAAGGCTGAGGCTAAG +
Preference number: 4 (lower is better)
Translates to: RSIGKNIQGVKGRQGIELFCSDV*SKAEAK
Trigger: CTTAGCCTCAGCCTTGGAGCAGACATCTGAGCAGAA...AAGTTCAATCCCCTGTCTCCCCTTTACTCCCTGGATGTTCTTGCCGATGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR GCA 90 bp TTGGAACTTCCTCAAATGATATTAAAAGCTCTACACAAAAGGTATGCAGAAGCACGAAGCTGCCGCCTCTaGTGTCGGGGGCTCAGCGCC +
Preference number: 4 (lower is better)
Translates to: LELPQMILKALHKRYAEARSCRL*CRGLSA
Trigger: GGCGCTGAGCCCCCGACAGCAGAGGCGGCAGCTTCG...TGCTTCTGCATACCTTTTGTGTAGAGCTTTTAATATCATTTGAGGAAGTTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp CCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTCAATATTTAAATTTCGAAGCTGCCGCCTCTaGTGTCGGGGGCTCAGCGCC +
Preference number: 4 (lower is better)
Translates to: PYLLRTQFHTGLNSIFKFRSCRL*CRGLSA
Trigger: GGCGCTGAGCCCCCGACAGCAGAGGCGGCAGCTTCG...AAATTTAAATATTGAGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp CCAACCACTCAGAGCTGGGTGATTTGGGGGCTTGTGATGCTGGTGTGGTTGGCTAAGGAGTCAGATTCATaGCAAGAATGTTGCTTACTC +
Preference number: 4 (lower is better)
Translates to: PTTQSWVIWGLVMLVWLAKESDS*QECCLL
Trigger: GAGTAAGCAACATTCTTGGCATGAATCTGACTCCTT...AGCCAACCACACCAGCATCACAAGCCCCCAAATCACCCAGCTCTGAGTGGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR GCA 90 bp GCAGAAAGCCACAGATTAAAGACAGCATTAGGTGGAGGAGCCCCTTTTGGGCACTCCCCAAAGTGTTTATaGTGGTCTCCTTCCCAACCA +
Preference number: 4 (lower is better)
Translates to: AESHRLKTALGGGAPFGHSPKCL*WSPSQP
Trigger: TGGTTGGGAAGGAGACCAGCATAAACACTTTGGGGA...GTGCCCAAAAGGGGCTCCTCCACCTAATGCTGTCTTTAATCTGTGGCTTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp AACATCCAGGGAGTAAAGGGGAGACAGGGGATTGAACTTCTGCTCCATACGTTTTGTGGCTTTCTCTGCTaGAGAGGTCCTCACCAACCA +
Preference number: 4 (lower is better)
Translates to: NIQGVKGRQGIELLLHTFCGFLC*RGPHQP
Trigger: TGGTTGGTGAGGACCTCTGCAGCAGAGAAAGCCACA...AAACGTATGGAGCAGAAGTTCAATCCCCTGTCTCCCCTTTACTCCCTGGATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR GCA 90 bp CACTGCTGCGTGAGAACCAGAGGCGACTCACAGGTCTGCTGGGCTGGTTTCAGCTTCTCAGTCTTAAAGTaGCATGTAAACTTAGCTTCA +
Preference number: 4 (lower is better)
Translates to: HCCVRTRGDSQVCWAGFSFSVLK*HVNLAS
Trigger: TGAAGCTAAGTTTACATGGCACTTTAAGACTGAGAA...GCTGAAACCAGCCCAGCAGACCTGTGAGTCGCCTCTGGTTCTCACGCAGCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp GAGTTGGTTCTGGTGGTGAAAGGACTGGGAATGTCGATTAAGATATGCAAGACTGCACACACACACTGCTaGGTGAGAACCAGAGGCGAC +
Preference number: 4 (lower is better)
Translates to: ELVLVVKGLGMSIKICKTAHTHC*VRTRGD
Trigger: GTCGCCTCTGGTTCTCACGCAGCAGTGTGTGTGTGC...AGTCTTGCATATCTTAATCGACATTCCCAGTCCTTTCACCACCAGAACCAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp CAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTACAGATCATGGCTCACTaGACCCTCAACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: QSVCVCVCVCVYTRPLSVQIMAH*TLNLLG
Trigger: GCCCAGGAGGTTGAGGGTGCAGTGAGCCATGATCTG...TACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp ACACTTCGTATGGGAAACAGGGGCAATCGCACTTTGGGGGAAGGAGGTGCTGCCGCTTTCCTAGAAGCCTaGAGTAATAAATGTGAATGC +
Preference number: 4 (lower is better)
Translates to: TLRMGNRGNRTLGEGGAAAFLEA*SNKCEC
Trigger: GCATTCACATTTATTACTGCAGGCTTCTAGGAAAGC...GGCAGCACCTCCTTCCCCCAAAGTGCGATTGCCCCTGTTTCCCATACGAAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp CCAACCACTCAGAGCTGGGTGATTTGGGGGCTTGTGATGCTGGTGTGGTTGGCTAACCAGAAATCTTTCTaGCGAGGGTCACTAATGATA +
Preference number: 4 (lower is better)
Translates to: PTTQSWVIWGLVMLVWLANQKSF*RGSLMI
Trigger: TATCATTAGTGACCCTCGGCAGAAAGATTTCTGGTT...AGCCAACCACACCAGCATCACAAGCCCCCAAATCACCCAGCTCTGAGTGGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR CCA 90 bp AACACATTCCAGTTGGCTCCATTAACTTCAGGGAGTTCTGTAGCACCTCTGATTCCGCCTGCGCCTGAGTaGTCGACAAGGTGCATTTTC +
Preference number: 4 (lower is better)
Translates to: NTFQLAPLTSGSSVAPLIPPAPE*STRCIF
Trigger: GAAAATGCACCTTGTCGACCACTCAGGCGCAGGCGG...AATCAGAGGTGCTACAGAACTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR CCA 90 bp GCAGAAAGCCACAGATTAAAGACAGCATTAGGTGGAGGAGCCCCTTTTGGGCACGGGTCACTAATGATATaGCTTATCCTCTCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: AESHRLKTALGGGAPFGHGSLMI*LILSVP
Trigger: GGGGACTGAGAGGATAAGCCATATCATTAGTGACCC...GTGCCCAAAAGGGGCTCCTCCACCTAATGCTGTCTTTAATCTGTGGCTTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp CCAAGTTCATCATATGGAGCATTGCCAACAGCCCAGAGGGTTTCTTTGTGCCCTAGATGCTGTGGCCACTaGTTTCCGCTTCCTCTTGAT +
Preference number: 4 (lower is better)
Translates to: PSSSYGALPTAQRVSLCPRCCGH*FPLPLD
Trigger: ATCAAGAGGAAGCGGAAACCAGTGGCCACAGCATCT...AGGGCACAAAGAAACCCTCTGGGCTGTTGGCAATGCTCCATATGATGAACTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553588.1
CDS-3UTR CCA 90 bp GAAAGTGGAACCCCAAGTTTCACTGTATTCATAGGGCTAGTGCTGATGCCCCAAGACTCACAGGTCTGCTaGGCTGGTTTCAGCACTTTC +
Preference number: 4 (lower is better)
Translates to: ESGTPSFTVFIGLVLMPQDSQVC*AGFSTF
Trigger: GAAAGTGCTGAAACCAGCCCAGCAGACCTGTGAGTC...TTGGGGCATCAGCACTAGCCCTATGAATACAGTGAAACTTGGGGTTCCACTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp GGCTCAAAGGCAAGCCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTAATGTGGGAACACCTTaGCCACCTGACCTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: GSKASLISCEHNSIQVSTNVGTP*PPDLWR
Trigger: CCTCCAAAGGTCAGGTGGCCAAGGTGTTCCCACATT...AGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGGCTTGCCTTTGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp TGGAGGTTTTCACTAATAGGCCATGATCATGGGACCAATCACTGCATGAGTCATCCCGAGGCTGTTATGTaGTGGGGGAGGGCTGAGATT +
Preference number: 4 (lower is better)
Translates to: WRFSLIGHDHGTNHCMSHPEAVM*WGRAEI
Trigger: AATCTCAGCCCTCCCCCACCACATAACAGCCTCGGG...ATGACTCATGCAGTGATTGGTCCCATGATCATGGCCTATTAGTGAAAACCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp ACTCAGGCTTTCAAAGGGTTGAGGAAAGGTCTTTTGTTTGAAGGAAGGAGTATCTCAGACACTGGCCCATaGCCCAGTGGCCCACAGCTT +
Preference number: 4 (lower is better)
Translates to: TQAFKGLRKGLLFEGRSISDTGP*PSGPQL
Trigger: AAGCTGTGGGCCACTGGGCCATGGGCCAGTGTCTGA...GATACTCCTTCCTTCAAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp TTCACTCTTGTAAACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGGTATGCTCTGCCAGGTaGGTGAAGTCAGAACGACGC +
Preference number: 4 (lower is better)
Translates to: FTLVNSQHIPVGSINFREVCSAR*VKSERR
Trigger: GCGTCGTTCTGACTTCACTCACCTGGCAGAGCATAC...CTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTTTACAAGAGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR TCA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACGGCCTCATCCAGACTTaGCTCAGAGGCCTCGCTGTA +
Preference number: 4 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYGLIQT*LRGLAV
Trigger: TACAGCGAGGCCTCTGAGTCAAGTCTGGATGAGGCC...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR TCA 90 bp ACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTAATGACAGTGTTTGGCCTCATCCAGACTTaGCTCAGAGGCCTCGCTGTA +
Preference number: 4 (lower is better)
Translates to: TQLRLVGLQAIDTVMTVFGLIQT*LRGLAV
Trigger: TACAGCGAGGCCTCTGAGTCAAGTCTGGATGAGGCC...AAACACTGTCATTACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR TCA 90 bp ATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAGAGCTAGCAGCCACCTCTaGTGTCACTCGCTTCACCTT +
Preference number: 4 (lower is better)
Translates to: ICVCVCVCVCIHTSSFSRASSHL*CHSLHL
Trigger: AAGGTGAAGCGAGTGACATCAGAGGTGGCTGCTAGC...TCTACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR TCA 90 bp CAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAGCTAGCAGCCACCTCTaGTGTCACTCGCTTCACCTT +
Preference number: 4 (lower is better)
Translates to: QSVCVCVCVCVYTRPLSVASSHL*CHSLHL
Trigger: AAGGTGAAGCGAGTGACATCAGAGGTGGCTGCTAGC...TACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR TCA 90 bp ATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAGAACCTTCAGCTTCTGCTaGAGGCTAGCAGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: ICVCVCVCVCIHTSSFSRTFSFC*RLAATS
Trigger: AGAGGTGGCTGCTAGCCTTCAGCAGAAGCTGAAGGT...TCTACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR TCA 90 bp ACAGAAGACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTAATGACACCTTCAGCTTCTGCTaGAGGCTAGCAGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: TEDTAQACRFTGNRHCNDTFSFC*RLAATS
Trigger: AGAGGTGGCTGCTAGCCTTCAGCAGAAGCTGAAGGT...GTCATTACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGTCTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR TCA 90 bp AACATCCAGGGAGTAAAGGGGAGACAGGGGATTGAACTTCTGCTCCATACGTTTCTCATAGCTCCAATCTaGCACCTTCAGCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: NIQGVKGRQGIELLLHTFLIAPI*HLQLLL
Trigger: CAGCAGAAGCTGAAGGTGTCAGATTGGAGCTATGAG...AAACGTATGGAGCAGAAGTTCAATCCCCTGTCTCCCCTTTACTCCCTGGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR TCA 90 bp CTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTTCGCCCCTTTCTaGGGCATCGAGCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LNHLLHYTNLCVCVCVCVFFAPF*GIELQL
Trigger: GAGCTGCAGCTCGATGCCTCAGAAAGGGGCGAAGAA...CACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR TCA 90 bp GAGTTGGTTCTGGTGGTGAAAGGACTGGGAATGTCGATTAAGATATGCAAGACTCCTCTTGATGTCACGTaGACATGGTGGTCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: ELVLVVKGLGMSIKICKTPLDVT*TWWSPV
Trigger: CACTGGGGACCACCATGTTCACGTGACATCAAGAGG...AGTCTTGCATATCTTAATCGACATTCCCAGTCCTTTCACCACCAGAACCAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554375.5
ENST00000621494.1
CDS-3UTR TCA 90 bp AAGCAGATGCATGAGTGGGAGTCCCTCTACAATGTGACCAGAGCAGGGAGCACTAGCAGATCAAATACATaGGCTCAAGGATCATCCTCA +
Preference number: 4 (lower is better)
Translates to: KQMHEWESLYNVTRAGSTSRSNT*AQGSSS
Trigger: TGAGGATGATCCTTGAGCTCATGTATTTGATCTGCT...AGTGCTCCCTGCTCTGGTCACATTGTAGAGGGACTCCCACTCATGCATCTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp CAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTATTGGGATTATGGGCGTaGGTCACCACACCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: QSVCVCVCVCVYTRPLSVLGLWA*VTTPRL
Trigger: AAGCCTGGGTGTGGTGACTCACGCCCATAATCCCAA...TACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp AGTGGCCCACAGCTTATGCATATGTACATGCCCTCCAACAGTTCAGTTTGTAAACCCACCTCCCCATGCTaGTTTAACTGGTCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: SGPQLMHMYMPSNSSVCKPTSPC*FNWSVV
Trigger: GACCACAGACCAGTTAAATCAGCATGGGGAGGTGGG...TTTACAAACTGAACTGTTGGAGGGCATGTACATATGCATAAGCTGTGGGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCCATACAGGTGTTCACTaGAATAACGGAGGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: CKSVHISVPALYAQWASCHTGVH*NNGGGG
Trigger: GCCGCCACCTCCGTTATTTCAGTGAACACCTGTATG...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCTGGCTGTCCAGCATCTaGAGTACCTTCCCATGTGTG +
Preference number: 4 (lower is better)
Translates to: CKSVHISVPALYAQWASCWLSSI*STFPCV
Trigger: CACACATGGGAAGGTACTTCAGATGCTGGACAGCCA...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp TGGAGGTTTTCACTAATAGGCCATGATCATGGGACCAATCACTGCATGAGTCATTCCCTAAGAGGTCCCTaGGGAGGACTTCGCTTCATC +
Preference number: 4 (lower is better)
Translates to: WRFSLIGHDHGTNHCMSHSLRGP*GGLRFI
Trigger: GATGAAGCGAAGTCCTCCTCAGGGACCTCTTAGGGA...ATGACTCATGCAGTGATTGGTCCCATGATCATGGCCTATTAGTGAAAACCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp ACACTTCGTATGGGAAACAGGGGCAATCGCACTTTGGGGGAAGGAGGTGCTGCCTACACATCTAATGAATaGAGGGGCATTTCTAAAAGC +
Preference number: 4 (lower is better)
Translates to: TLRMGNRGNRTLGEGGAAYTSNE*RGISKS
Trigger: GCTTTTAGAAATGCCCCTTCATTCATTAGATGTGTA...GGCAGCACCTCCTTCCCCCAAAGTGCGATTGCCCCTGTTTCCCATACGAAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp AAGCAGATGCATGAGTGGGAGTCCCTCTACAATGTGACCAGAGCAGGGAGCACTGGAATCAGTCAGCCATaGTTCCAAATACACCATTAC +
Preference number: 4 (lower is better)
Translates to: KQMHEWESLYNVTRAGSTGISQP*FQIHHY
Trigger: GTAATGGTGTATTTGGAATCATGGCTGACTGATTCC...AGTGCTCCCTGCTCTGGTCACATTGTAGAGGGACTCCCACTCATGCATCTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp GAAAGTGGAACCCCAAGTTTCACTGTATTCATAGGGCTAGTGCTGATGCCCCAAACTGCTCACATTCCCTaGGCTGGCCTCACTTTATCT +
Preference number: 4 (lower is better)
Translates to: ESGTPSFTVFIGLVLMPQTAHIP*AGLTLS
Trigger: AGATAAAGTGAGGCCAGCTCAGGGAATGTGAGCAGT...TTGGGGCATCAGCACTAGCCCTATGAATACAGTGAAACTTGGGGTTCCACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261530.12
CDS-3UTR TCA 90 bp AATGAAATCAATGCTATGATGAGCCTGTCCCAGCTCTGCCGCAACCTACTCATGAGCTTTCACCAACAATaGCCAGCTGGGAAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: NEINAMMSLSQLCRNLLMSFHQQ*PAGKRL
Trigger: CAGCCTTTTCCCAGCTGGTCATTGTTGGTGAAAGCT...CATGAGTAGGTTGCGGCAGAGCTGGGACAGGCTCATCATAGCATTGATTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556372.2
CDS-3UTR GCA 90 bp GCCAGGGTTAAAAACCACTGCCTCGGTAGACTGCAGAATGGACAGAGTGCAGATGAGTGGTCGACAAGGTaGATTTTCAGTAAAGGAGTC +
Preference number: 4 (lower is better)
Translates to: ARVKNHCLGRLQNGQSADEWSTR*IFSKGV
Trigger: GACTCCTTTACTGAAAATGCACCTTGTCGACCACTC...ATCTGCACTCTGTCCATTCTGCAGTCTACCGAGGCAGTGGTTTTTAACCCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp GCCAGGGTTAAAAACCACTGCCTCGGTAGACTGCAGAATGGACAGAGTGCAGATGGGATTGAACTCATGTaGACAAGCAGAAATGTGAGG +
Preference number: 4 (lower is better)
Translates to: ARVKNHCLGRLQNGQSADGIELM*TSRNVR
Trigger: CCTCACATTTCTGCTTGTGCACATGAGTTCAATCCC...ATCTGCACTCTGTCCATTCTGCAGTCTACCGAGGCAGTGGTTTTTAACCCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261530.12
CDS-3UTR GCA 90 bp ACTCAGGCTTTCAAAGGGTTGAGGAAAGGTCTTTTGTTTGAAGGAAGGAGTATCCACAGGGAAGGGAAGTaGAGCCTGGGAAGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: TQAFKGLRKGLLFEGRSIHREGK*SLGSPC
Trigger: ACAGGGACTTCCCAGGCTGCACTTCCCTTCCCTGTG...GATACTCCTTCCTTCAAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp CTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTCACCCAGGCTGGAGTaGAGTGGCCAGATCATGGCT +
Preference number: 4 (lower is better)
Translates to: LNHLLHYTNLCVCVCVCVSPRLE*SGQIMA
Trigger: AGCCATGATCTGGCCACTGCACTCCAGCCTGGGTGA...CACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp GAAAGTGGAACCCCAAGTTTCACTGTATTCATAGGGCTAGTGCTGATGCCCCAACTAAGTGGGAAGTTCTaGCCGAGGCTGTTATGTGGT +
Preference number: 4 (lower is better)
Translates to: ESGTPSFTVFIGLVLMPQLSGKF*PRLLCG
Trigger: ACCACATAACAGCCTCGGGCAGAACTTCCCACTTAG...TTGGGGCATCAGCACTAGCCCTATGAATACAGTGAAACTTGGGGTTCCACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp GAAAGTGGAACCCCAAGTTTCACTGTATTCATAGGGCTAGTGCTGATGCCCCAATGCCCTCCTCCTTGCTaGCAAAATACCCTGTCATTC +
Preference number: 4 (lower is better)
Translates to: ESGTPSFTVFIGLVLMPQCPPPC*QNTLSF
Trigger: GAATGACAGGGTATTTTGGCAGCAAGGAGGAGGGCA...TTGGGGCATCAGCACTAGCCCTATGAATACAGTGAAACTTGGGGTTCCACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp AAAGTTACAGAAGACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTCCGCCTGCGCCTGAGTaGTCGACAAGGTGCATTTTC +
Preference number: 4 (lower is better)
Translates to: KVTEDTAQACRFTGNRHCPPAPE*STRCIF
Trigger: GAAAATGCACCTTGTCGACCACTCAGGCGCAGGCGG...ACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGTCTTCTGTAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR CCA 90 bp GATGCTGTGGCCACTGGTTTCCGCTTCCTCTTGATGTCACGTGAACATGGTGGTTGCTACACACACTGCTaGTTTCACATTCTGACATGT +
Preference number: 4 (lower is better)
Translates to: DAVATGFRFLLMSREHGGCYTHC*FHILTC
Trigger: ACATGTCAGAATGTGAAACCAGCAGTGTGTGTAGCA...ACCACCATGTTCACGTGACATCAAGAGGAAGCGGAAACCAGTGGCCACAGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR CCA 90 bp AATGAAATCAATGCTATGATGAGCCTGTCCCAGCTCTGCCGCAACCTACTCATGAGATGCTGTGGCCACTaGTTTCCGCTTCCTCTTGAT +
Preference number: 4 (lower is better)
Translates to: NEINAMMSLSQLCRNLLMRCCGH*FPLPLD
Trigger: ATCAAGAGGAAGCGGAAACCAGTGGCCACAGCATCT...CATGAGTAGGTTGCGGCAGAGCTGGGACAGGCTCATCATAGCATTGATTTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556372.2
CDS-3UTR CCA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCACCAACCACTCAGAGCTaGGTGATTTGGGGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSPTTQS*VIWGLV
Trigger: CACAAGCCCCCAAATCACCCAGCTCTGAGTGGTTGG...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp ACTCAGGCTTTCAAAGGGTTGAGGAAAGGTCTTTTGTTTGAAGGAAGGAGTATCCGCCTGGAGCCAAAGTaGAGAACCCATCGCATCAGC +
Preference number: 4 (lower is better)
Translates to: TQAFKGLRKGLLFEGRSIRLEPK*RTHRIS
Trigger: GCTGATGCGATGGGTTCTCCACTTTGGCTCCAGGCG...GATACTCCTTCCTTCAAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCCTTGTTGAAGACTGCTaGGCCTTGCGCTGGGAGTTT +
Preference number: 4 (lower is better)
Translates to: CKSVHISVPALYAQWASCLVEDC*ALRWEF
Trigger: AAACTCCCAGCGCAAGGCCCAGCAGTCTTCAACAAG...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp GCCAGGGTTAAAAACCACTGCCTCGGTAGACTGCAGAATGGACAGAGTGCAGATCTGTGTTGCATAGGCTaGTCTTCAACTCCTGCAATA +
Preference number: 4 (lower is better)
Translates to: ARVKNHCLGRLQNGQSADLCCIG*SSTPAI
Trigger: TATTGCAGGAGTTGAAGACCAGCCTATGCAACACAG...ATCTGCACTCTGTCCATTCTGCAGTCTACCGAGGCAGTGGTTTTTAACCCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp ACTCAGGCTTTCAAAGGGTTGAGGAAAGGTCTTTTGTTTGAAGGAAGGAGTATCGCAGTGGCCAGATCATaGCTCACTGCACCCTCAACC +
Preference number: 4 (lower is better)
Translates to: TQAFKGLRKGLLFEGRSIAVARS*LTAPST
Trigger: GGTTGAGGGTGCAGTGAGCCATGATCTGGCCACTGC...GATACTCCTTCCTTCAAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp CCAGAGCTGTCTTGTCAGGGCACTCTCGCTGGAATACAGGCCTCCGAGTGTTGTAGTCAACAAAAATTGTaGTGTATGCCATCAACCAGT +
Preference number: 4 (lower is better)
Translates to: PELSCQGTLAGIQASECCSQQKL*CMPSTS
Trigger: ACTGGTTGATGGCATACACCACAATTTTTGTTGACT...ACAACACTCGGAGGCCTGTATTCCAGCGAGAGTGCCCTGACAAGACAGCTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556372.2
CDS-3UTR TCA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTACCAGCTCATCCATaGGGCCACATCAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCVPAHP*GHISCR
Trigger: GCGGCAGCTGATGTGGCCTCATGGATGAGCTGGTAC...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000312858.9
CDS-3UTR TCA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACGTATGCTCTGCCAGGTaGGTGAAGTCAGAACGACGC +
Preference number: 4 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYVCSAR*VKSERR
Trigger: GCGTCGTTCTGACTTCACTCACCTGGCAGAGCATAC...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR TCA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGGGCCTCATCCAGACTTaGCTCAGAGGCCTCGCTGTA +
Preference number: 4 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVGLIQT*LRGLAV
Trigger: TACAGCGAGGCCTCTGAGTCAAGTCTGGATGAGGCC...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp CTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGGCTAGCAGCCACCTCTaGTGTCACTCGCTTCACCTT +
Preference number: 4 (lower is better)
Translates to: LNHLLHYTNLCVCVCVCVASSHL*CHSLHL
Trigger: AAGGTGAAGCGAGTGACATCAGAGGTGGCTGCTAGC...CACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR TCA 90 bp AAGTTACAGAAGACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTAGCTAGCAGCCACCTCTaGTGTCACTCGCTTCACCTT +
Preference number: 4 (lower is better)
Translates to: KLQKTQLRLVGLQAIDTVASSHL*CHSLHL
Trigger: AAGGTGAAGCGAGTGACATCAGAGGTGGCTGCTAGC...TACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGTCTTCTGTAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR TCA 90 bp AAGTTACAGAAGACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTAACCTTCAGCTTCTGCTaGAGGCTAGCAGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: KLQKTQLRLVGLQAIDTVTFSFC*RLAATS
Trigger: AGAGGTGGCTGCTAGCCTTCAGCAGAAGCTGAAGGT...TACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGTCTTCTGTAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR TCA 90 bp CTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGACCTTCAGCTTCTGCTaGAGGCTAGCAGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: LNHLLHYTNLCVCVCVCVTFSFC*RLAATS
Trigger: AGAGGTGGCTGCTAGCCTTCAGCAGAAGCTGAAGGT...CACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR TCA 90 bp AACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGTTCTGTAGCACCAGTCCTATTTTCTGCTaGTTCACACAATCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: NSQHIPVGSINFREFCSTSPIFC*FTQSVA
Trigger: GGCCACGGATTGTGTGAATCAGCAGAAAATAGGACT...GGTGCTACAGAACTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR TCA 90 bp GAAAGTGGAACCCCAAGTTTCACTGTATTCATAGGGCTAGTGCTGATGCCCCAAGCTGGTTTCACATTCTaGCATGTTCTCATCAGAGCC +
Preference number: 4 (lower is better)
Translates to: ESGTPSFTVFIGLVLMPQAGFTF*HVLIRA
Trigger: GGCTCTGATGAGAACATGTCAGAATGTGAAACCAGC...TTGGGGCATCAGCACTAGCCCTATGAATACAGTGAAACTTGGGGTTCCACTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGTTCTTCGCCCCTTTCTaGGGCATCGAGCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVFFAPF*GIELQL
Trigger: GAGCTGCAGCTCGATGCCTCAGAAAGGGGCGAAGAA...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCAACTCCACATGCAGCTaGGCCATCATAAACACGCCA +
Preference number: 4 (lower is better)
Translates to: CKSVHISVPALYAQWASCNSTCS*AIINTP
Trigger: TGGCGTGTTTATGATGGCTCAGCTGCATGTGGAGTT...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp GGCTCAAAGGCAAGCCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTGGACCAATCACTGCATaGGTCATAGAGCTTGACACA +
Preference number: 4 (lower is better)
Translates to: GSKASLISCEHNSIQVSTGPITA*VIELDT
Trigger: TGTGTCAAGCTCTATGACTCATGCAGTGATTGGTCC...AGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGGCTTGCCTTTGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACCCATCGCATCAGCAATaGCTGTGCCAGCCTAGTTCC +
Preference number: 4 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYPSHQQ*LCQPSS
Trigger: GGAACTAGGCTGGCACAGTCATTGCTGATGCGATGG...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGCCATCGCATGAACCATaGCGTCCTCCAAGCCATGCC +
Preference number: 4 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVPSHEP*RPPSHA
Trigger: GGCATGGCTTGGAGGACGTCATGGTTCATGCGATGG...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp AACACATTCCAGTTGGCTCCATTAACTTCAGGGAGTTCTGTAGCACCTCTGATTGCAGCAGGTATGCTCTaGCAGGTGAGTGAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: NTFQLAPLTSGSSVAPLIAAGML*QVSEVR
Trigger: TCTGACTTCACTCACCTGGCAGAGCATACCTGCTGC...AATCAGAGGTGCTACAGAACTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR GCA 90 bp GAGTTGGTTCTGGTGGTGAAAGGACTGGGAATGTCGATTAAGATATGCAAGACTCAGCGGGACAGACGCTaGTTCTTAGCAGACTTGAAC +
Preference number: 4 (lower is better)
Translates to: ELVLVVKGLGMSIKICKTQRDRR*FLADLN
Trigger: GTTCAAGTCTGCTAAGAAGCAGCGTCTGTCCCGCTG...AGTCTTGCATATCTTAATCGACATTCCCAGTCCTTTCACCACCAGAACCAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554375.5
ENST00000621494.1
CDS-3UTR GCA 90 bp CTTGTAAACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGTTCTGTGCCCAGTGTCACTGCTaGTACACACACTGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: LVNSQHIPVGSINFREFCAQCHC*YTHCWF
Trigger: AAACCAGCAGTGTGTGTAGCAGCAGTGACACTGGGC...ACAGAACTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTTTACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR GCA 90 bp AAGTTACAGAAGACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTAAGAGCCCAGTGTCACTaGTGCTACACACACTGCTGG +
Preference number: 4 (lower is better)
Translates to: KLQKTQLRLVGLQAIDTVRAQCH*CYTHCW
Trigger: CCAGCAGTGTGTGTAGCAGCAGTGACACTGGGCTCT...TACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGTCTTCTGTAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR GCA 90 bp AACATCCAGGGAGTAAAGGGGAGACAGGGGATTGAACTTCTGCTCCATACGTTTTCCCCAAAGTGTTTATaGTGGTCTCCTTCCCAACCA +
Preference number: 4 (lower is better)
Translates to: NIQGVKGRQGIELLLHTFSPKCL*WSPSQP
Trigger: TGGTTGGGAAGGAGACCAGCATAAACACTTTGGGGA...AAACGTATGGAGCAGAAGTTCAATCCCCTGTCTCCCCTTTACTCCCTGGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR GCA 90 bp AGTGGCCCACAGCTTATGCATATGTACATGCCCTCCAACAGTTCAGTTTGTAAATGTGGCTTTCTCTGCTaGAGAGGTCCTCACCAACCA +
Preference number: 4 (lower is better)
Translates to: SGPQLMHMYMPSNSSVCKCGFLC*RGPHQP
Trigger: TGGTTGGTGAGGACCTCTGCAGCAGAGAAAGCCACA...TTTACAAACTGAACTGTTGGAGGGCATGTACATATGCATAAGCTGTGGGCCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp GAGTTGGTTCTGGTGGTGAAAGGACTGGGAATGTCGATTAAGATATGCAAGACTTGTGGCTTTCTCTGCTaGAGAGGTCCTCACCAACCA +
Preference number: 4 (lower is better)
Translates to: ELVLVVKGLGMSIKICKTCGFLC*RGPHQP
Trigger: TGGTTGGTGAGGACCTCTGCAGCAGAGAAAGCCACA...AGTCTTGCATATCTTAATCGACATTCCCAGTCCTTTCACCACCAGAACCAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554375.5
ENST00000621494.1
CDS-3UTR GCA 90 bp GGTTTCCGCTTCCTCTTGATGTCACGTGAACATGGTGGTCCCCAGTGTACATTTAAATGTAGCAGTAGTTaGGTCTGTGGCTTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: GFRFLLMSREHGGPQCTFKCSSS*VCGFLC
Trigger: GCAGAGAAAGCCACAGACGCAACTACTGCTACATTT...AAATGTACACTGGGGACCACCATGTTCACGTGACATCAAGAGGAAGCGGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR GCA 90 bp GAGTTGGTTCTGGTGGTGAAAGGACTGGGAATGTCGATTAAGATATGCAAGACTTGGAGGGTGAAGTCCTaGTCTCTAGCTGTATCCAGG +
Preference number: 4 (lower is better)
Translates to: ELVLVVKGLGMSIKICKTWRVKS*SLAVSR
Trigger: CCTGGATACAGCTAGAGAGCAGGACTTCACCCTCCA...AGTCTTGCATATCTTAATCGACATTCCCAGTCCTTTCACCACCAGAACCAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554375.5
ENST00000621494.1
CDS-3UTR GCA 90 bp TGCTCTGAAGTACTGAGATTCAGTCCTAGCAAGAGATTACCAATAACTCAACAGGCACACACACACTGCTaGGTGAGAACCAGAGGCGAC +
Preference number: 4 (lower is better)
Translates to: CSEVLRFSPSKRLPITQQAHTHC*VRTRGD
Trigger: GTCGCCTCTGGTTCTCACGCAGCAGTGTGTGTGTGC...CTGTTGAGTTATTGGTAATCTCTTGCTAGGACTGAATCTCAGTACTTCAGAGCA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGCAGATCATGGCTCACTaGACCCTCAACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVQIMAH*TLNLLG
Trigger: GCCCAGGAGGTTGAGGGTGCAGTGAGCCATGATCTG...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp ATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAGAACTGCCTCGGTAGACTaGAGAATGGACAGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: ICVCVCVCVCIHTSSFSRTASVD*RMDRVQ
Trigger: CTGCACTCTGTCCATTCTGCAGTCTACCGAGGCAGT...TCTACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp TATGGAGCATTGCCAACAGCCCAGAGGGTTTCTTTGTGCCCTCTCTTGGTCACTCTGGCACACGGTACATaGTCAATAAATGATAACTGC +
Preference number: 4 (lower is better)
Translates to: YGALPTAQRVSLCPLLVTLAHGT*SINDNC
Trigger: GCAGTTATCATTTATTGAGCATGTACCGTGTGCCAG...AGTGACCAAGAGAGGGCACAAAGAAACCCTCTGGGCTGTTGGCAATGCTCCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553588.1
CDS-3UTR CCA 90 bp TGCTCTGAAGTACTGAGATTCAGTCCTAGCAAGAGATTACCAATAACTCAACAGCCGCCTGCGCCTGAGTaGTCGACAAGGTGCATTTTC +
Preference number: 4 (lower is better)
Translates to: CSEVLRFSPSKRLPITQQPPAPE*STRCIF
Trigger: GAAAATGCACCTTGTCGACCACTCAGGCGCAGGCGG...CTGTTGAGTTATTGGTAATCTCTTGCTAGGACTGAATCTCAGTACTTCAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGCCGCCTGCGCCTGAGTaGTCGACAAGGTGCATTTTC +
Preference number: 4 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVPPAPE*STRCIF
Trigger: GAAAATGCACCTTGTCGACCACTCAGGCGCAGGCGG...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp TTCACTCTTGTAAACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGGATTCACACAATCCGTaGCCTGATGAGGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: FTLVNSQHIPVGSINFREDSHNP*PDEVQG
Trigger: TCCCTGGACCTCATCAGGCCACGGATTGTGTGAATC...CTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTTTACAAGAGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR CCA 90 bp TGGAGGTTTTCACTAATAGGCCATGATCATGGGACCAATCACTGCATGAGTCATGATTCACACAATCCGTaGCCTGATGAGGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: WRFSLIGHDHGTNHCMSHDSHNP*PDEVQG
Trigger: TCCCTGGACCTCATCAGGCCACGGATTGTGTGAATC...ATGACTCATGCAGTGATTGGTCCCATGATCATGGCCTATTAGTGAAAACCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp GAGTTGGTTCTGGTGGTGAAAGGACTGGGAATGTCGATTAAGATATGCAAGACTGTACATTTGCCTGTCTaGCAGAGCAGTGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: ELVLVVKGLGMSIKICKTVHLPV*QSSVLV
Trigger: CACCAGCACACTGCTCTGCCAGACAGGCAAATGTAC...AGTCTTGCATATCTTAATCGACATTCCCAGTCCTTTCACCACCAGAACCAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554375.5
ENST00000621494.1
CDS-3UTR CCA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCAGTACATTTGCCTGTCTaGCAGAGCAGTGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSVHLPV*QSSVLV
Trigger: CACCAGCACACTGCTCTGCCAGACAGGCAAATGTAC...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCACTTGTGATGCTGGTGTaGTTGGCTCCACTGCATCCA +
Preference number: 4 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSLVMLV*LAPLHP
Trigger: TGGATGCAGTGGAGCCAACCACACCAGCATCACAAG...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp CAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTACTTGTGATGCTGGTGTaGTTGGCTCCACTGCATCCA +
Preference number: 4 (lower is better)
Translates to: QSVCVCVCVCVYTRPLSVLVMLV*LAPLHP
Trigger: TGGATGCAGTGGAGCCAACCACACCAGCATCACAAG...TACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CCA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACCCAACCACTCAGAGCTaGGTGATTTGGGGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYPTTQS*VIWGLV
Trigger: CACAAGCCCCCAAATCACCCAGCTCTGAGTGGTTGG...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CCA 90 bp GAAAGTGGAACCCCAAGTTTCACTGTATTCATAGGGCTAGTGCTGATGCCCCAAAAGCAGATGCATGAGTaGGAGTCCCTCTACAATGTG +
Preference number: 4 (lower is better)
Translates to: ESGTPSFTVFIGLVLMPQKQMHE*ESLYNV
Trigger: CACATTGTAGAGGGACTCCCACTCATGCATCTGCTT...TTGGGGCATCAGCACTAGCCCTATGAATACAGTGAAACTTGGGGTTCCACTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp ATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAGAGACTCACAGGTCTGCTaGGCTGGTTTCAGCACTTTC +
Preference number: 4 (lower is better)
Translates to: ICVCVCVCVCIHTSSFSRDSQVC*AGFSTF
Trigger: GAAAGTGCTGAAACCAGCCCAGCAGACCTGTGAGTC...TCTACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp CTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTGGGTGTCTAAGTaGGAAGTTCTGCCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: LNHLLHYTNLCVCVCVCVVWVSK*EVLPEA
Trigger: AGCCTCGGGCAGAACTTCCCACTTAGACACCCACAC...CACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACCTACCTCACTGGGCTTaGAGGAGGAACAAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYLPHWA*RRNKGG
Trigger: ACCTCCCTTGTTCCTCCTCCAAGCCCAGTGAGGTAG...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp CTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCCCATGGCCCAGTaGCCCACAGCTTATGCATAT +
Preference number: 4 (lower is better)
Translates to: LNHLLHYTNLCVCVCVCVWPMAQ*PTAYAY
Trigger: ATATGCATAAGCTGTGGGCCACTGGGCCATGGGCCA...CACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp GAAAGTGGAACCCCAAGTTTCACTGTATTCATAGGGCTAGTGCTGATGCCCCAAGCTTTGTATGCACAATaGGCCAGTTGCAGTAGGGTT +
Preference number: 4 (lower is better)
Translates to: ESGTPSFTVFIGLVLMPQALYAQ*ASCSRV
Trigger: AACCCTACTGCAACTGGCCCATTGTGCATACAAAGC...TTGGGGCATCAGCACTAGCCCTATGAATACAGTGAAACTTGGGGTTCCACTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp CCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTCAATATTTAAATTTCCTTCCGCCTGCGCCTaGGTGGTCGACAAGGTGCAT +
Preference number: 4 (lower is better)
Translates to: PYLLRTQFHTGLNSIFKFPSACA*VVDKVH
Trigger: ATGCACCTTGTCGACCACTCAGGCGCAGGCGGAAGG...AAATTTAAATATTGAGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR TCA 90 bp AACACATTCCAGTTGGCTCCATTAACTTCAGGGAGTTCTGTAGCACCTCTGATTCTCATAGCTCCAATCTaGCACCTTCAGCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: NTFQLAPLTSGSSVAPLILIAPI*HLQLLL
Trigger: CAGCAGAAGCTGAAGGTGTCAGATTGGAGCTATGAG...AATCAGAGGTGCTACAGAACTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR TCA 90 bp TTCACTCTTGTAAACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGCTCATAGCTCCAATCTaGCACCTTCAGCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: FTLVNSQHIPVGSINFRELIAPI*HLQLLL
Trigger: CAGCAGAAGCTGAAGGTGTCAGATTGGAGCTATGAG...CTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTTTACAAGAGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR TCA 90 bp ATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAGATCTACTTCAGAACAATaGTCAGGAGCCCACTTGGGC +
Preference number: 4 (lower is better)
Translates to: ICVCVCVCVCIHTSSFSRSTSEQ*SGAHLG
Trigger: GCCCAAGTGGGCTCCTGATCATTGTTCTGAAGTAGA...TCTACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR TCA 90 bp AACACATTCCAGTTGGCTCCATTAACTTCAGGGAGTTCTGTAGCACCTCTGATTTCTACTTCAGAACAATaGTCAGGAGCCCACTTGGGC +
Preference number: 4 (lower is better)
Translates to: NTFQLAPLTSGSSVAPLISTSEQ*SGAHLG
Trigger: GCCCAAGTGGGCTCCTGATCATTGTTCTGAAGTAGA...AATCAGAGGTGCTACAGAACTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR TCA 90 bp TTCACTCTTGTAAACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGGTATGGTACCCTCTTTaGGCTGGCCGAGAAGGTAAA +
Preference number: 4 (lower is better)
Translates to: FTLVNSQHIPVGSINFREVWYPL*AGREGK
Trigger: TTTACCTTCTCGGCCAGCTCAAAGAGGGTACCATAC...CTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTTTACAAGAGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR TCA 90 bp GAGTTGGTTCTGGTGGTGAAAGGACTGGGAATGTCGATTAAGATATGCAAGACTGTTTCCGCTTCCTCTTaGTGTCACGTGAACATGGTG +
Preference number: 4 (lower is better)
Translates to: ELVLVVKGLGMSIKICKTVSASS*CHVNMV
Trigger: CACCATGTTCACGTGACATCAAGAGGAAGCGGAAAC...AGTCTTGCATATCTTAATCGACATTCCCAGTCCTTTCACCACCAGAACCAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554375.5
ENST00000621494.1
CDS-3UTR TCA 90 bp TGGAGGTTTTCACTAATAGGCCATGATCATGGGACCAATCACTGCATGAGTCATAACACCTTGGCCACCTaGCCTTTGGAGGTTTTCACT +
Preference number: 4 (lower is better)
Translates to: WRFSLIGHDHGTNHCMSHNTLAT*PLEVFT
Trigger: AGTGAAAACCTCCAAAGGTCAGGTGGCCAAGGTGTT...ATGACTCATGCAGTGATTGGTCCCATGATCATGGCCTATTAGTGAAAACCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp GGCTCAAAGGCAAGCCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTAGGGCAGAGAAAATCTaGAAGTCTGGGATTCTAGTC +
Preference number: 4 (lower is better)
Translates to: GSKASLISCEHNSIQVSTRAEKI*KSGILV
Trigger: GACTAGAATCCCAGACTTTCAGATTTTCTCTGCCCT...AGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGGCTTGCCTTTGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp AAGCAGATGCATGAGTGGGAGTCCCTCTACAATGTGACCAGAGCAGGGAGCACTAATGAAACAAAGACCTaGAATCAATCATGCATCACC +
Preference number: 4 (lower is better)
Translates to: KQMHEWESLYNVTRAGSTNETKT*NQSCIT
Trigger: GGTGATGCATGATTGATTTCAGGTCTTTGTTTCATT...AGTGCTCCCTGCTCTGGTCACATTGTAGAGGGACTCCCACTCATGCATCTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCAGACATATAGGGCACTaGACACAGCTTCTAACGCTG +
Preference number: 4 (lower is better)
Translates to: CKSVHISVPALYAQWASCRHIGH*TQLLTL
Trigger: CAGCGTTAGAAGCTGTGTTCAGTGCCCTATATGTCT...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp TGCTCTGAAGTACTGAGATTCAGTCCTAGCAAGAGATTACCAATAACTCAACAGCCTCCAACCATCGCATaGACCATGACGTCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: CSEVLRFSPSKRLPITQQPPTIA*TMTSSK
Trigger: CTTGGAGGACGTCATGGTTCATGCGATGGTTGGAGG...CTGTTGAGTTATTGGTAATCTCTTGCTAGGACTGAATCTCAGTACTTCAGAGCA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp GAAAGTGGAACCCCAAGTTTCACTGTATTCATAGGGCTAGTGCTGATGCCCCAACTGTTTCCGGGCATTTaGTGTTCATCTTTTGGAGAC +
Preference number: 4 (lower is better)
Translates to: ESGTPSFTVFIGLVLMPQLFPGI*CSSFGD
Trigger: GTCTCCAAAAGATGAACATCAAATGCCCGGAAACAG...TTGGGGCATCAGCACTAGCCCTATGAATACAGTGAAACTTGGGGTTCCACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp CCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTCAATATTTAAATTTCCCTGGAGGGCTTGTTaGAGACTGCTGGGCCTTGCG +
Preference number: 4 (lower is better)
Translates to: PYLLRTQFHTGLNSIFKFPWRAC*RLLGLA
Trigger: CGCAAGGCCCAGCAGTCTTCAACAAGCCCTCCAGGG...AAATTTAAATATTGAGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGTTGGGATTATGGGCGTaGGTCACCACACCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVLGLWA*VTTPRL
Trigger: AAGCCTGGGTGTGGTGACTCACGCCCATAATCCCAA...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp GAAAGTGGAACCCCAAGTTTCACTGTATTCATAGGGCTAGTGCTGATGCCCCAACATGCTCTGAAGTACTaGGATTCAGTCCTAGCAAGA +
Preference number: 4 (lower is better)
Translates to: ESGTPSFTVFIGLVLMPQHALKY*DSVLAR
Trigger: TCTTGCTAGGACTGAATCTCAGTACTTCAGAGCATG...TTGGGGCATCAGCACTAGCCCTATGAATACAGTGAAACTTGGGGTTCCACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp GCAGAAAGCCACAGATTAAAGACAGCATTAGGTGGAGGAGCCCCTTTTGGGCACAAAGAAAACACGGTGTaGTTAAGTGGGATCACAGAA +
Preference number: 4 (lower is better)
Translates to: AESHRLKTALGGGAPFGHKENTV*LSGITE
Trigger: TTCTGTGATCCCACTTAATCACACCGTGTTTTCTTT...GTGCCCAAAAGGGGCTCCTCCACCTAATGCTGTCTTTAATCTGTGGCTTTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp GGCTCAAAGGCAAGCCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTAACAGCCTACAGACATaGGCATCTGAGGAAATGAGA +
Preference number: 4 (lower is better)
Translates to: GSKASLISCEHNSIQVSTNSLQT*ASEEMR
Trigger: TCTCATTTCCTCAGATGCTCATGTCTGTAGGCTGTT...AGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGGCTTGCCTTTGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp AAGTTACAGAAGACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTAGTACCAGCTCATCCATaGGGCCACATCTGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: KLQKTQLRLVGLQAIDTVVPAHP*GHICQK
Trigger: CTTTTGGCAGATGTGGCCTCATGGATGAGCTGGTAC...TACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGTCTTCTGTAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556663.5
CDS-3UTR TCA 90 bp GATGCTGTGGCCACTGGTTTCCGCTTCCTCTTGATGTCACGTGAACATGGTGGTTGCAAAGTTCAAAACTaGTTTCGTTCTCTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: DAVATGFRFLLMSREHGGCKVQN*FRSLFP
Trigger: TGGGAAAAGAGAACGAAATCAGTTTTGAACTTTGCA...ACCACCATGTTCACGTGACATCAAGAGGAAGCGGAAACCAGTGGCCACAGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR GCA 90 bp CTTGTAAACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGTTCTGTTTCTGCTCAGATGTCTaGTCCAAGGCTGAGGCTAAG +
Preference number: 4 (lower is better)
Translates to: LVNSQHIPVGSINFREFCFCSDV*SKAEAK
Trigger: CTTAGCCTCAGCCTTGGAGCAGACATCTGAGCAGAA...ACAGAACTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTTTACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR GCA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACGCAGCAGGTATGCTCTaGCAGGTGAGTGAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYAAGML*QVSEVR
Trigger: TCTGACTTCACTCACCTGGCAGAGCATACCTGCTGC...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp AAAGTTACAGAAGACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTGCAGCAGGTATGCTCTaGCAGGTGAGTGAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: KVTEDTAQACRFTGNRHCAAGML*QVSEVR
Trigger: TCTGACTTCACTCACCTGGCAGAGCATACCTGCTGC...ACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGTCTTCTGTAACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR GCA 90 bp CTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGCAGCGGGACAGACGCTaGTTCTTAGCAGACTTGAAC +
Preference number: 4 (lower is better)
Translates to: LNHLLHYTNLCVCVCVCVQRDRR*FLADLN
Trigger: GTTCAAGTCTGCTAAGAAGCAGCGTCTGTCCCGCTG...CACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp AAGTTACAGAAGACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTACAGCGGGACAGACGCTaGTTCTTAGCAGACTTGAAC +
Preference number: 4 (lower is better)
Translates to: KLQKTQLRLVGLQAIDTVQRDRR*FLADLN
Trigger: GTTCAAGTCTGCTAAGAAGCAGCGTCTGTCCCGCTG...TACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGTCTTCTGTAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR GCA 90 bp ACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTAATGACAGTGTTTGCCCAGTGTCACTGCTaGTACACACACTGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: TQLRLVGLQAIDTVMTVFAQCHC*YTHCWF
Trigger: AAACCAGCAGTGTGTGTAGCAGCAGTGACACTGGGC...AAACACTGTCATTACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR GCA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACGCCCAGTGTCACTGCTaGTACACACACTGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYAQCHC*YTHCWF
Trigger: AAACCAGCAGTGTGTGTAGCAGCAGTGACACTGGGC...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp TGCTCTGAAGTACTGAGATTCAGTCCTAGCAAGAGATTACCAATAACTCAACAGAGAGCCCAGTGTCACTaGTGCTACACACACTGCTGG +
Preference number: 4 (lower is better)
Translates to: CSEVLRFSPSKRLPITQQRAQCH*CYTHCW
Trigger: CCAGCAGTGTGTGTAGCAGCAGTGACACTGGGCTCT...CTGTTGAGTTATTGGTAATCTCTTGCTAGGACTGAATCTCAGTACTTCAGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACTCCCCAGTGTACATTTaGCTGTCTGGCAGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYSPVYI*LSGRAV
Trigger: CACTGCTCTGCCAGACAGGCAAATGTACACTGGGGA...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACGTCTGTGGCTTTCTCTaGTGCAGAGGTCCTCACCAA +
Preference number: 4 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYVCGFL*CRGPHQ
Trigger: TTGGTGAGGACCTCTGCAGCAGAGAAAGCCACAGAC...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp GGCTCAAAGGCAAGCCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTAAATGTAGCAGTAGTTaGGTCTGTGGCTTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: GSKASLISCEHNSIQVSTKCSSS*VCGFLC
Trigger: GCAGAGAAAGCCACAGACGCAACTACTGCTACATTT...AGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGGCTTGCCTTTGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp GAGTTGGTTCTGGTGGTGAAAGGACTGGGAATGTCGATTAAGATATGCAAGACTCTAAGTGGGAAGTTCTaGCCGAGGCTGTTATGTGGT +
Preference number: 4 (lower is better)
Translates to: ELVLVVKGLGMSIKICKTLSGKF*PRLLCG
Trigger: ACCACATAACAGCCTCGGGCAGAACTTCCCACTTAG...AGTCTTGCATATCTTAATCGACATTCCCAGTCCTTTCACCACCAGAACCAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp GCAGAAAGCCACAGATTAAAGACAGCATTAGGTGGAGGAGCCCCTTTTGGGCACGTGCTTTTAAGTTGGTaGATTAAGGTGGTATGGCAA +
Preference number: 4 (lower is better)
Translates to: AESHRLKTALGGGAPFGHVLLSW*IKVVWQ
Trigger: TTGCCATACCACCTTAATGCACCAACTTAAAAGCAC...GTGCCCAAAAGGGGCTCCTCCACCTAATGCTGTCTTTAATCTGTGGCTTTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp TGGAGGTTTTCACTAATAGGCCATGATCATGGGACCAATCACTGCATGAGTCATGTGGCCCACAGCTTATaGATATGTACATGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: WRFSLIGHDHGTNHCMSHVAHSL*ICTCPP
Trigger: TGGAGGGCATGTACATATGCATAAGCTGTGGGCCAC...ATGACTCATGCAGTGATTGGTCCCATGATCATGGCCTATTAGTGAAAACCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp CAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAGGAATAAATCGCCACTaGTCACATTCCCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: QSVCVCVCVCVYTRPLSVGINRH*SHSLSW
Trigger: CCAGCTCAGGGAATGTGAGCAGTGGCGATTTATTCC...TACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261530.12
CDS-3UTR CCA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTCCGCCTGCGCCTGAGTaGTCGACAAGGTGCATTTTC +
Preference number: 4 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCPPAPE*STRCIF
Trigger: GAAAATGCACCTTGTCGACCACTCAGGCGCAGGCGG...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CCA 90 bp AAAGTTACAGAAGACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTGATTCACACAATCCGTaGCCTGATGAGGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: KVTEDTAQACRFTGNRHCDSHNP*PDEVQG
Trigger: TCCCTGGACCTCATCAGGCCACGGATTGTGTGAATC...ACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGTCTTCTGTAACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR CCA 90 bp AACATCCAGGGAGTAAAGGGGAGACAGGGGATTGAACTTCTGCTCCATACGTTTAGGGACAGTGAATCCTaGGACACATTCTCCTTCATA +
Preference number: 4 (lower is better)
Translates to: NIQGVKGRQGIELLLHTFRDSES*DTFSFI
Trigger: TATGAAGGAGAATGTGTCCCAGGATTCACTGTCCCT...AAACGTATGGAGCAGAAGTTCAATCCCCTGTCTCCCCTTTACTCCCTGGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR CCA 90 bp GGCTCAAAGGCAAGCCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTAGGGACAGTGAATCCTaGGACACATTCTCCTTCATA +
Preference number: 4 (lower is better)
Translates to: GSKASLISCEHNSIQVSTRDSES*DTFSFI
Trigger: TATGAAGGAGAATGTGTCCCAGGATTCACTGTCCCT...AGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGGCTTGCCTTTGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CCA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCACCAAAGTGTTTATGCTaGTCTCCTTCCCAACCAGCC +
Preference number: 4 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSPKCLC*SPSQPA
Trigger: GGCTGGTTGGGAAGGAGACCAGCATAAACACTTTGG...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp ATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAGAAGATGCTGTGGCCACTaGTTTCCGCTTCCTCTTGAT +
Preference number: 4 (lower is better)
Translates to: ICVCVCVCVCIHTSSFSRRCCGH*FPLPLD
Trigger: ATCAAGAGGAAGCGGAAACCAGTGGCCACAGCATCT...TCTACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CCA 90 bp GAAAGTGGAACCCCAAGTTTCACTGTATTCATAGGGCTAGTGCTGATGCCCCAATACTTCCCCAAAGCATaGCCCCAAGAAGCCATTATT +
Preference number: 4 (lower is better)
Translates to: ESGTPSFTVFIGLVLMPQYFPKA*PQEAII
Trigger: AATAATGGCTTCTTGGGGCCATGCTTTGGGGAAGTA...TTGGGGCATCAGCACTAGCCCTATGAATACAGTGAAACTTGGGGTTCCACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACCATGAGAACCAGGGGTaGAACATCCCTGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYHENQG*NIPVST
Trigger: TGTGCTCACAGGGATGTTCCACCCCTGGTTCTCATG...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp ACTCAGGCTTTCAAAGGGTTGAGGAAAGGTCTTTTGTTTGAAGGAAGGAGTATCTGGATTTCTGGGCTCTaGCAACCAGTTAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: TQAFKGLRKGLLFEGRSIWISGL*QPVRTQ
Trigger: CTGGGTCCTAACTGGTTGCCAGAGCCCAGAAATCCA...GATACTCCTTCCTTCAAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp AAGCAGATGCATGAGTGGGAGTCCCTCTACAATGTGACCAGAGCAGGGAGCACTTTCCAAAGAAGGAAGTaGTTATATAGCATCAGTGTC +
Preference number: 4 (lower is better)
Translates to: KQMHEWESLYNVTRAGSTFQRRK*LYSISV
Trigger: GACACTGATGCTATATAACCACTTCCTTCTTTGGAA...AGTGCTCCCTGCTCTGGTCACATTGTAGAGGGACTCCCACTCATGCATCTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp GCCAGGGTTAAAAACCACTGCCTCGGTAGACTGCAGAATGGACAGAGTGCAGATGGGCAATGGTTCTGGTaGACCTTTGTTATTCTTATT +
Preference number: 4 (lower is better)
Translates to: ARVKNHCLGRLQNGQSADGQWFW*TFVILI
Trigger: AATAAGAATAACAAAGGTCCACCAGAACCATTGCCC...ATCTGCACTCTGTCCATTCTGCAGTCTACCGAGGCAGTGGTTTTTAACCCTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCGCTTTGTATGCACAATaGGCCAGTTGCAGTAGGGTT +
Preference number: 4 (lower is better)
Translates to: CKSVHISVPALYAQWASCALYAQ*ASCSRV
Trigger: AACCCTACTGCAACTGGCCCATTGTGCATACAAAGC...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CAA 72 bp TGGGGCAATGGTTCTGGTGGACCTTTGTTATTCTTATaGGCTGTCCAGCATCTGAAGTACCTTCCCATGTGT +
Preference number: 4 (lower is better)
Translates to: WGNGSGGPLLFL*AVQHLKYLPMC
Trigger: ACACATGGGAAGGTACTTCAGATGCTGGACAGCCAATAAGAATAACAAAGGTCCACCAGAACCATTGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CAA 72 bp AGGCAATGCAAATCTGTTCACATCTCAGTTCCAGCTTaGTATGCACAATGGGCCAGTTGCAGTAGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: RQCKSVHISVPA*YAQWASCSRVS
Trigger: GGAAACCCTACTGCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCATTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTACCTTCAGCTTCTGCTaGAGGCTAGCAGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCTFSFC*RLAATS
Trigger: AGAGGTGGCTGCTAGCCTTCAGCAGAAGCTGAAGGT...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR TCA 90 bp CAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAAGTCCTATTTTCTGCTaGTTCACACAATCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: QSVCVCVCVCVYTRPLSVSPIFC*FTQSVA
Trigger: GGCCACGGATTGTGTGAATCAGCAGAAAATAGGACT...TACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR TCA 90 bp AGTGGCCCACAGCTTATGCATATGTACATGCCCTCCAACAGTTCAGTTTGTAAAAGTCCTATTTTCTGCTaGTTCACACAATCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: SGPQLMHMYMPSNSSVCKSPIFC*FTQSVA
Trigger: GGCCACGGATTGTGTGAATCAGCAGAAAATAGGACT...TTTACAAACTGAACTGTTGGAGGGCATGTACATATGCATAAGCTGTGGGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp AACACATTCCAGTTGGCTCCATTAACTTCAGGGAGTTCTGTAGCACCTCTGATTGCTGGTTTCACATTCTaGCATGTTCTCATCAGAGCC +
Preference number: 4 (lower is better)
Translates to: NTFQLAPLTSGSSVAPLIAGFTF*HVLIRA
Trigger: GGCTCTGATGAGAACATGTCAGAATGTGAAACCAGC...AATCAGAGGTGCTACAGAACTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR TCA 90 bp ACAGAAGACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTAATGACGCTGGTTTCACATTCTaGCATGTTCTCATCAGAGCC +
Preference number: 4 (lower is better)
Translates to: TEDTAQACRFTGNRHCNDAGFTF*HVLIRA
Trigger: GGCTCTGATGAGAACATGTCAGAATGTGAAACCAGC...GTCATTACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGTCTTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR TCA 90 bp AAGTTACAGAAGACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTATCTACTTCAGAACAATaGTCAGGAGCCCACTTGGGC +
Preference number: 4 (lower is better)
Translates to: KLQKTQLRLVGLQAIDTVSTSEQ*SGAHLG
Trigger: GCCCAAGTGGGCTCCTGATCATTGTTCTGAAGTAGA...TACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGTCTTCTGTAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR TCA 90 bp AAAGTTACAGAAGACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTGTATGGTACCCTCTTTaGGCTGGCCGAGAAGGTAAA +
Preference number: 4 (lower is better)
Translates to: KVTEDTAQACRFTGNRHCVWYPL*AGREGK
Trigger: TTTACCTTCTCGGCCAGCTCAAAGAGGGTACCATAC...ACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGTCTTCTGTAACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR TCA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTCCTCTTGATGTCACGTaGACATGGTGGTCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCPLDVT*TWWSPV
Trigger: CACTGGGGACCACCATGTTCACGTGACATCAAGAGG...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR TCA 90 bp GGCTCAAAGGCAAGCCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTCACAACATGATCTTCTaGGAGAAAGAATCCACTGCT +
Preference number: 4 (lower is better)
Translates to: GSKASLISCEHNSIQVSTHNMIF*EKESTA
Trigger: AGCAGTGGATTCTTTCTCTCAGAAGATCATGTTGTG...AGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGGCTTGCCTTTGAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR TCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCAGGCCCCTGAATGAATaGCAGACACTCCTGATAATA +
Preference number: 4 (lower is better)
Translates to: CKSVHISVPALYAQWASCRPLNE*QTLLII
Trigger: TATTATCAGGAGTGTCTGTCATTCATTCAGGGGCCT...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGTGTCAGCTAGGCCCCTaGATGAATGACAGACACTCC +
Preference number: 4 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVCQLGP*MNDRHS
Trigger: GGAGTGTCTGTCATTCATTCAGGGGCCTAGCTGACA...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp GAGTTGGTTCTGGTGGTGAAAGGACTGGGAATGTCGATTAAGATATGCAAGACTGGACCAATCACTGCATaGGTCATAGAGCTTGACACA +
Preference number: 4 (lower is better)
Translates to: ELVLVVKGLGMSIKICKTGPITA*VIELDT
Trigger: TGTGTCAAGCTCTATGACTCATGCAGTGATTGGTCC...AGTCTTGCATATCTTAATCGACATTCCCAGTCCTTTCACCACCAGAACCAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp GAAAGTGGAACCCCAAGTTTCACTGTATTCATAGGGCTAGTGCTGATGCCCCAAAGCAGATCAAATACATaGGCTCAAGGATCATCCTCA +
Preference number: 4 (lower is better)
Translates to: ESGTPSFTVFIGLVLMPQSRSNT*AQGSSS
Trigger: TGAGGATGATCCTTGAGCTCATGTATTTGATCTGCT...TTGGGGCATCAGCACTAGCCCTATGAATACAGTGAAACTTGGGGTTCCACTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp CTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGGCAGAGGGAAGCAGCTaGCAAGAGCTAACTGCTTTT +
Preference number: 4 (lower is better)
Translates to: LNHLLHYTNLCVCVCVCVAEGSS*QELTAF
Trigger: AAAAGCAGTTAGCTCTTGTCAGCTGCTTCCCTCTGC...CACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp ATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAGATATGGTTCTCAAACTTaGGCATGCACCAAAGACCCC +
Preference number: 4 (lower is better)
Translates to: ICVCVCVCVCIHTSSFSRYGSQT*ACTKDP
Trigger: GGGGTCTTTGGTGCATGCTCAAGTTTGAGAACCATA...TCTACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCGAGCATCTGAGGAAATaGGAACTCCTAGTACACCTT +
Preference number: 4 (lower is better)
Translates to: CKSVHISVPALYAQWASCEHLRK*ELLVHL
Trigger: AAGGTGTACTAGGAGTTCTCATTTCCTCAGATGCTC...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp GGCTCAAAGGCAAGCCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTTTAAAAACATTTGATTaGGGGGTCAGCAAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: GSKASLISCEHNSIQVSTLKTFD*GVSKGQ
Trigger: CTGACCCTTGCTGACCCCTCAATCAAATGTTTTTAA...AGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGGCTTGCCTTTGAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp ATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAGAGAAGTCACTGGTGGGTaGATCCAGCAAGAACAGTTT +
Preference number: 4 (lower is better)
Translates to: ICVCVCVCVCIHTSSFSREVTGG*IQQEQF
Trigger: AAACTGTTCTTGCTGGATTCACCCACCAGTGACTTC...TCTACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCACAGGACACAGGCATATaGCTACTAATCAGATCCACC +
Preference number: 4 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSQDTGI*LLIRST
Trigger: GGTGGATCTGATTAGTAGTCATATGCCTGTGTCCTG...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp GCCAGGGTTAAAAACCACTGCCTCGGTAGACTGCAGAATGGACAGAGTGCAGATGGCTTAAAATATCAATaGTTGCTAAGGTGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: ARVKNHCLGRLQNGQSADGLKYQ*LLRCSV
Trigger: GACTGAACACCTTAGCAATCATTGATATTTTAAGCC...ATCTGCACTCTGTCCATTCTGCAGTCTACCGAGGCAGTGGTTTTTAACCCTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp AAGTTACAGAAGACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTATTCTGCTCAGATGTCTaGTCCAAGGCTGAGGCTAAG +
Preference number: 4 (lower is better)
Translates to: KLQKTQLRLVGLQAIDTVFCSDV*SKAEAK
Trigger: CTTAGCCTCAGCCTTGGAGCAGACATCTGAGCAGAA...TACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGTCTTCTGTAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR GCA 90 bp TGCTCTGAAGTACTGAGATTCAGTCCTAGCAAGAGATTACCAATAACTCAACAGGCCCAGTGTCACTGCTaGTACACACACTGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: CSEVLRFSPSKRLPITQQAQCHC*YTHCWF
Trigger: AAACCAGCAGTGTGTGTAGCAGCAGTGACACTGGGC...CTGTTGAGTTATTGGTAATCTCTTGCTAGGACTGAATCTCAGTACTTCAGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp GAGTTGGTTCTGGTGGTGAAAGGACTGGGAATGTCGATTAAGATATGCAAGACTTCCCCAAAGTGTTTATaGTGGTCTCCTTCCCAACCA +
Preference number: 4 (lower is better)
Translates to: ELVLVVKGLGMSIKICKTSPKCL*WSPSQP
Trigger: TGGTTGGGAAGGAGACCAGCATAAACACTTTGGGGA...AGTCTTGCATATCTTAATCGACATTCCCAGTCCTTTCACCACCAGAACCAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554375.5
ENST00000621494.1
CDS-3UTR GCA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGGGGCTAGACAAAGATaGTGTGGCCACTGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCGARQR*CGHWFP
Trigger: CGGAAACCAGTGGCCACAGCATCTTTGTCTAGCCCC...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp CTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTACAGTAAGCCACTCTaGTCTCAGCCCAGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: LNHLLHYTNLCVCVCVCVYSKPL*SQPSSD
Trigger: ATCTGAGCTGGGCTGAGAGCAGAGTGGCTTACTGTA...CACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCACCCACTTCTCCACCTTaGCAAGATTGCTTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSPTSPP*QDCFFA
Trigger: AGCAAAGAAGCAATCTTGGCAAGGTGGAGAAGTGGG...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp GAGTTGGTTCTGGTGGTGAAAGGACTGGGAATGTCGATTAAGATATGCAAGACTCACATTGAGAATTCCTaGTCTGGGCATCTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: ELVLVVKGLGMSIKICKTHIENS*SGHLPF
Trigger: GAAAGGGAGATGCCCAGAGCAGGAATTCTCAATGTG...AGTCTTGCATATCTTAATCGACATTCCCAGTCCTTTCACCACCAGAACCAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp TGCTCTGAAGTACTGAGATTCAGTCCTAGCAAGAGATTACCAATAACTCAACAGAGCCCAGGAGTATCCTaGTTTAGGGCAGTTACCCTC +
Preference number: 4 (lower is better)
Translates to: CSEVLRFSPSKRLPITQQSPGVS*FRAVTL
Trigger: GAGGGTAACTGCCCTAAAGCAGGATACTCCTGGGCT...CTGTTGAGTTATTGGTAATCTCTTGCTAGGACTGAATCTCAGTACTTCAGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp CTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGCCCACAGCTTATaGATATGTACATGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: LNHLLHYTNLCVCVCVCVVAHSL*ICTCPP
Trigger: TGGAGGGCATGTACATATGCATAAGCTGTGGGCCAC...CACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCGCTCTGAATAAACCATaGTTTTACCCTTGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: CKSVHISVPALYAQWASCALNKP*FYPWRA
Trigger: AGCCCTCCAAGGGTAAAAGCATGGTTTATTCAGAGC...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp CAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAAATGGCATTGAGAGCTaGGTGTCGTTTGGCTACCAT +
Preference number: 4 (lower is better)
Translates to: QSVCVCVCVCVYTRPLSVNGIES*VSFGYH
Trigger: ATGGTAGCCAAACGACACCCAGCTCTCAATGCCATT...TACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CCA 90 bp CTTGTAAACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGTTCTGTAATGGCATTGAGAGCTaGGTGTCGTTTGGCTACCAT +
Preference number: 4 (lower is better)
Translates to: LVNSQHIPVGSINFREFCNGIES*VSFGYH
Trigger: ATGGTAGCCAAACGACACCCAGCTCTCAATGCCATT...ACAGAACTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTTTACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR CCA 90 bp GGCTCAAAGGCAAGCCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTTGCTACACACACTGCTaGTTTCACATTCTGACATGT +
Preference number: 4 (lower is better)
Translates to: GSKASLISCEHNSIQVSTCYTHC*FHILTC
Trigger: ACATGTCAGAATGTGAAACCAGCAGTGTGTGTAGCA...AGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGGCTTGCCTTTGAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CCA 90 bp AACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGTTCTGTAGCACCTGCTACACACACTGCTaGTTTCACATTCTGACATGT +
Preference number: 4 (lower is better)
Translates to: NSQHIPVGSINFREFCSTCYTHC*FHILTC
Trigger: ACATGTCAGAATGTGAAACCAGCAGTGTGTGTAGCA...GGTGCTACAGAACTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR CCA 90 bp GAAAGTGGAACCCCAAGTTTCACTGTATTCATAGGGCTAGTGCTGATGCCCCAATGCTACACACACTGCTaGTTTCACATTCTGACATGT +
Preference number: 4 (lower is better)
Translates to: ESGTPSFTVFIGLVLMPQCYTHC*FHILTC
Trigger: ACATGTCAGAATGTGAAACCAGCAGTGTGTGTAGCA...TTGGGGCATCAGCACTAGCCCTATGAATACAGTGAAACTTGGGGTTCCACTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp CTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGCCAAAGTGTTTATGCTaGTCTCCTTCCCAACCAGCC +
Preference number: 4 (lower is better)
Translates to: LNHLLHYTNLCVCVCVCVPKCLC*SPSQPA
Trigger: GGCTGGTTGGGAAGGAGACCAGCATAAACACTTTGG...CACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CCA 90 bp CTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGAGATGCTGTGGCCACTaGTTTCCGCTTCCTCTTGAT +
Preference number: 4 (lower is better)
Translates to: LNHLLHYTNLCVCVCVCVRCCGH*FPLPLD
Trigger: ATCAAGAGGAAGCGGAAACCAGTGGCCACAGCATCT...CACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCTCATTACACTTCGTATaGGAAACAGGGGCAATCGCA +
Preference number: 4 (lower is better)
Translates to: CKSVHISVPALYAQWASCSLHFV*ETGAIA
Trigger: TGCGATTGCCCCTGTTTCCCATACGAAGTGTAATGA...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp GAGTTGGTTCTGGTGGTGAAAGGACTGGGAATGTCGATTAAGATATGCAAGACTTGGCCACCTGACCTTTaGAGGTTTTCACTAATAGGC +
Preference number: 4 (lower is better)
Translates to: ELVLVVKGLGMSIKICKTWPPDL*RFSLIG
Trigger: GCCTATTAGTGAAAACCTCCAAAGGTCAGGTGGCCA...AGTCTTGCATATCTTAATCGACATTCCCAGTCCTTTCACCACCAGAACCAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGAATGTGGGAACACCTTaGCCACCTGACCTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVNVGTP*PPDLWR
Trigger: CCTCCAAAGGTCAGGTGGCCAAGGTGTTCCCACATT...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp GCCAGGGTTAAAAACCACTGCCTCGGTAGACTGCAGAATGGACAGAGTGCAGATTCTAAGGCTATCCTCTaGAACTGGTTAATACAGAAA +
Preference number: 4 (lower is better)
Translates to: ARVKNHCLGRLQNGQSADSKAIL*NWLIQK
Trigger: TTTCTGTATTAACCAGTTCCAGAGGATAGCCTTAGA...ATCTGCACTCTGTCCATTCTGCAGTCTACCGAGGCAGTGGTTTTTAACCCTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACGCTGAGGCAGGAGGATaGCTTGAGCTTATGAGTTCA +
Preference number: 4 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYAEAGG*LELMSS
Trigger: TGAACTCATAAGCTCAAGCCATCCTCCTGCCTCAGC...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp CAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTACAGGTTTTAGAGTGGTaGTTCTCAGCCTCAGCTACA +
Preference number: 4 (lower is better)
Translates to: QSVCVCVCVCVYTRPLSVQVLEW*FSASAT
Trigger: TGTAGCTGAGGCTGAGAACCACCACTCTAAAACCTG...TACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACAGCCAGGTTTTAGAGTaGTGGTTCTCAGCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYSQVLE*WFSASA
Trigger: AGCTGAGGCTGAGAACCACCACTCTAAAACCTGGCT...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCATGTTCAATCAGTGACTaGGGCAATGGTTCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSCSISD*GNGSGG
Trigger: TCCACCAGAACCATTGCCCCAGTCACTGATTGAACA...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp GCCAGGGTTAAAAACCACTGCCTCGGTAGACTGCAGAATGGACAGAGTGCAGATTGTAAGCTTTACATGTaGGCCATACTAAAACACTTG +
Preference number: 4 (lower is better)
Translates to: ARVKNHCLGRLQNGQSADCKLYM*AILKHL
Trigger: CAAGTGTTTTAGTATGGCCCACATGTAAAGCTTACA...ATCTGCACTCTGTCCATTCTGCAGTCTACCGAGGCAGTGGTTTTTAACCCTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp ACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTAATGACAGTGTTTAGTTTGCGCCCATTCTaGTACCAACTACCACCTGGA +
Preference number: 4 (lower is better)
Translates to: TQLRLVGLQAIDTVMTVFSLRPF*YQLPPG
Trigger: TCCAGGTGGTAGTTGGTACCAGAATGGGCGCAAACT...AAACACTGTCATTACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556663.5
3UTR CAA 72 bp TCAATCAGTGACTGGGGCAATGGTTCTGGTGGACCTTaGTTATTCTTATTGGCTGTCCAGCATCTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: SISDWGNGSGGP*LFLLAVQHLKY
Trigger: GTACTTCAGATGCTGGACAGCCAATAAGAATAACAAAGGTCCACCAGAACCATTGCCCCAGTCACTGATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCAGTATGCTCTGCCAGGTaGGTGAAGTCAGAACGACGC +
Preference number: 4 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSVCSAR*VKSERR
Trigger: GCGTCGTTCTGACTTCACTCACCTGGCAGAGCATAC...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR TCA 90 bp ACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTAATGACAGTGTTTAGTCCTATTTTCTGCTaGTTCACACAATCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: TQLRLVGLQAIDTVMTVFSPIFC*FTQSVA
Trigger: GGCCACGGATTGTGTGAATCAGCAGAAAATAGGACT...AAACACTGTCATTACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR TCA 90 bp ACTCAGGCTTTCAAAGGGTTGAGGAAAGGTCTTTTGTTTGAAGGAAGGAGTATCGCTGGTTTCACATTCTaGCATGTTCTCATCAGAGCC +
Preference number: 4 (lower is better)
Translates to: TQAFKGLRKGLLFEGRSIAGFTF*HVLIRA
Trigger: GGCTCTGATGAGAACATGTCAGAATGTGAAACCAGC...GATACTCCTTCCTTCAAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp TGCTCTGAAGTACTGAGATTCAGTCCTAGCAAGAGATTACCAATAACTCAACAGTCTACTTCAGAACAATaGTCAGGAGCCCACTTGGGC +
Preference number: 4 (lower is better)
Translates to: CSEVLRFSPSKRLPITQQSTSEQ*SGAHLG
Trigger: GCCCAAGTGGGCTCCTGATCATTGTTCTGAAGTAGA...CTGTTGAGTTATTGGTAATCTCTTGCTAGGACTGAATCTCAGTACTTCAGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCATTCACTAATAGGCCATaGTCATGGGACCAATCACTG +
Preference number: 4 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSFTNRP*SWDQSL
Trigger: CAGTGATTGGTCCCATGATCATGGCCTATTAGTGAA...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGAACACCTTGGCCACCTaGCCTTTGGAGGTTTTCACT +
Preference number: 4 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVNTLAT*PLEVFT
Trigger: AGTGAAAACCTCCAAAGGTCAGGTGGCCAAGGTGTT...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp AGTGGCCCACAGCTTATGCATATGTACATGCCCTCCAACAGTTCAGTTTGTAAACCTGGCTTAGTTATGTaGTTTGGAGCAAGTCACTCA +
Preference number: 4 (lower is better)
Translates to: SGPQLMHMYMPSNSSVCKPGLVM*FGASHS
Trigger: TGAGTGACTTGCTCCAAATCACATAACTAAGCCAGG...TTTACAAACTGAACTGTTGGAGGGCATGTACATATGCATAAGCTGTGGGCCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp TGGAGGTTTTCACTAATAGGCCATGATCATGGGACCAATCACTGCATGAGTCATCCTGGCTTAGTTATGTaGTTTGGAGCAAGTCACTCA +
Preference number: 4 (lower is better)
Translates to: WRFSLIGHDHGTNHCMSHPGLVM*FGASHS
Trigger: TGAGTGACTTGCTCCAAATCACATAACTAAGCCAGG...ATGACTCATGCAGTGATTGGTCCCATGATCATGGCCTATTAGTGAAAACCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp ATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAGAAGGGCAGAGAAAATCTaGAAGTCTGGGATTCTAGTC +
Preference number: 4 (lower is better)
Translates to: ICVCVCVCVCIHTSSFSRRAEKI*KSGILV
Trigger: GACTAGAATCCCAGACTTTCAGATTTTCTCTGCCCT...TCTACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp TGGAGGTTTTCACTAATAGGCCATGATCATGGGACCAATCACTGCATGAGTCATCATGCTCTGAAGTACTaGGATTCAGTCCTAGCAAGA +
Preference number: 4 (lower is better)
Translates to: WRFSLIGHDHGTNHCMSHHALKY*DSVLAR
Trigger: TCTTGCTAGGACTGAATCTCAGTACTTCAGAGCATG...ATGACTCATGCAGTGATTGGTCCCATGATCATGGCCTATTAGTGAAAACCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCATTCAAATCGTTACCATaGCTTTGGGGTGGCATCAGT +
Preference number: 4 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSFKSLP*LWGGIS
Trigger: ACTGATGCCACCCCAAAGTCATGGTAACGATTTGAA...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp TGGAGGTTTTCACTAATAGGCCATGATCATGGGACCAATCACTGCATGAGTCATTTCAAATCGTTACCATaGCTTTGGGGTGGCATCAGT +
Preference number: 4 (lower is better)
Translates to: WRFSLIGHDHGTNHCMSHFKSLP*LWGGIS
Trigger: ACTGATGCCACCCCAAAGTCATGGTAACGATTTGAA...ATGACTCATGCAGTGATTGGTCCCATGATCATGGCCTATTAGTGAAAACCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGCAGTCTGTGCTAGACTaGCCTACCAAACAACTCCAC +
Preference number: 4 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVQSVLD*PTKQLH
Trigger: GTGGAGTTGTTTGGTAGGTCAGTCTAGCACAGACTG...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp ACTCAGGCTTTCAAAGGGTTGAGGAAAGGTCTTTTGTTTGAAGGAAGGAGTATCTGTTTGTTCAATCAGTaGCTGGGGCAATGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: TQAFKGLRKGLLFEGRSICLFNQ*LGQWFW
Trigger: CCAGAACCATTGCCCCAGTCACTGATTGAACAAACA...GATACTCCTTCCTTCAAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCACGCACAGAGAAGGGATaGGCCCATTCACAGTTGCCT +
Preference number: 4 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSRTEKG*AHSQLP
Trigger: AGGCAACTGTGAATGGGCTCATCCCTTCTCTGTGCG...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp AACACATTCCAGTTGGCTCCATTAACTTCAGGGAGTTCTGTAGCACCTCTGATTATATTATCTCCCCACTaGGCCAAGCTAACTGTGAGA +
Preference number: 4 (lower is better)
Translates to: NTFQLAPLTSGSSVAPLIILSPH*AKLTVR
Trigger: TCTCACAGTTAGCTTGGCTCAGTGGGGAGATAATAT...AATCAGAGGTGCTACAGAACTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR GCA 90 bp TTCACTCTTGTAAACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGTCACCAAGCTTATTCTaGTCAGATGTCTGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: FTLVNSQHIPVGSINFRESPSLF*SDVCSK
Trigger: CTTGGAGCAGACATCTGAGCAGAATAAGCTTGGTGA...CTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTTTACAAGAGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR GCA 90 bp TGGAGGTTTTCACTAATAGGCCATGATCATGGGACCAATCACTGCATGAGTCATTCACCAAGCTTATTCTaGTCAGATGTCTGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: WRFSLIGHDHGTNHCMSHSPSLF*SDVCSK
Trigger: CTTGGAGCAGACATCTGAGCAGAATAAGCTTGGTGA...ATGACTCATGCAGTGATTGGTCCCATGATCATGGCCTATTAGTGAAAACCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp TTCACTCTTGTAAACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGGAGTGGTCGACAAGGTaGATTTTCAGTAAAGGAGTC +
Preference number: 4 (lower is better)
Translates to: FTLVNSQHIPVGSINFREEWSTR*IFSKGV
Trigger: GACTCCTTTACTGAAAATGCACCTTGTCGACCACTC...CTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTTTACAAGAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR GCA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCAAGAGCCCAGTGTCACTaGTGCTACACACACTGCTGG +
Preference number: 4 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSRAQCH*CYTHCW
Trigger: CCAGCAGTGTGTGTAGCAGCAGTGACACTGGGCTCT...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp ACGCAGGATTCTGATGTTGAACTAAACCATATGCAAATCAGATTCATTCTGCTTGGGGCTAGACAAAGATaGTGTGGCCACTGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: TQDSDVELNHMQIRFILLGARQR*CGHWFP
Trigger: CGGAAACCAGTGGCCACAGCATCTTTGTCTAGCCCC...AAGCAGAATGAATCTGATTTGCATATGGTTTAGTTCAACATCAGAATCCTGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR GCA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCAAAATGTAGCAGTAGTTaGGTCTGTGGCTTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSKCSSS*VCGFLC
Trigger: GCAGAGAAAGCCACAGACGCAACTACTGCTACATTT...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCACAGAAAATAAGCAGATaGATGAGTGGGAGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSQKISR*MSGSPS
Trigger: AGAGGGACTCCCACTCATGCATCTGCTTATTTTCTG...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp TGGAGGTTTTCACTAATAGGCCATGATCATGGGACCAATCACTGCATGAGTCATCTGACAAGAGCTAACTaGTTTTACCATCCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: WRFSLIGHDHGTNHCMSHLTRAN*FYHPSN
Trigger: GTTGGAGGGATGGTAAAAGCAGTTAGCTCTTGTCAG...ATGACTCATGCAGTGATTGGTCCCATGATCATGGCCTATTAGTGAAAACCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp GAAAGTGGAACCCCAAGTTTCACTGTATTCATAGGGCTAGTGCTGATGCCCCAAAATGTCTTCATGACATaGCCCATTCTTCAACACTGT +
Preference number: 4 (lower is better)
Translates to: ESGTPSFTVFIGLVLMPQNVFMT*PILQHC
Trigger: ACAGTGTTGAAGAATGGGGCATGTCATGAAGACATT...TTGGGGCATCAGCACTAGCCCTATGAATACAGTGAAACTTGGGGTTCCACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTACTGCCTCGGTAGACTaGAGAATGGACAGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCTASVD*RMDRVQ
Trigger: CTGCACTCTGTCCATTCTGCAGTCTACCGAGGCAGT...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp GGCTCAAAGGCAAGCCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTGCTTTCCTAGAAGCCTaGAGTAATAAATGTGAATGC +
Preference number: 4 (lower is better)
Translates to: GSKASLISCEHNSIQVSTAFLEA*SNKCEC
Trigger: GCATTCACATTTATTACTGCAGGCTTCTAGGAAAGC...AGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGGCTTGCCTTTGAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCAGCTCTGAATAAACCATaGTTTTACCCTTGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSALNKP*FYPWRA
Trigger: AGCCCTCCAAGGGTAAAAGCATGGTTTATTCAGAGC...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp CTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGAGTTCCAGCTTTGTATaGACAATGGGCCAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: LNHLLHYTNLCVCVCVCVSSSFV*TMGQLQ
Trigger: CTGCAACTGGCCCATTGTGCATACAAAGCTGGAACT...CACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp GGCTCAAAGGCAAGCCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTTCGCCTAATTTAAAATaGTGGTCAGTCAGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: GSKASLISCEHNSIQVSTSPNLK*WSVRSC
Trigger: ACAGCTTCTGACTGACCAGCATTTTAAATTAGGCGA...AGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGGCTTGCCTTTGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp GGGAATGATAACCATACCGGTCTCATGGGTCATCCATTTCATCTTGAGAACTCCTTGAGAACTCCTACTTaGTCCTTAGCTTTCACCAAC +
Preference number: 4 (lower is better)
Translates to: GNDNHTGLMGHPFHLENSLRTPT*SLAFTN
Trigger: GTTGGTGAAAGCTAAGGAGCAAGTAGGAGTTCTCAA...GGAGTTCTCAAGATGAAATGGATGACCCATGAGACCGGTATGGTTATCATTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556372.2
CDS-3UTR CCA 90 bp ACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTAATGACAGTGTTTAATGGCATTGAGAGCTaGGTGTCGTTTGGCTACCAT +
Preference number: 4 (lower is better)
Translates to: TQLRLVGLQAIDTVMTVFNGIES*VSFGYH
Trigger: ATGGTAGCCAAACGACACCCAGCTCTCAATGCCATT...AAACACTGTCATTACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR CCA 90 bp ACTCAGGCTTTCAAAGGGTTGAGGAAAGGTCTTTTGTTTGAAGGAAGGAGTATCAATGGCATTGAGAGCTaGGTGTCGTTTGGCTACCAT +
Preference number: 4 (lower is better)
Translates to: TQAFKGLRKGLLFEGRSINGIES*VSFGYH
Trigger: ATGGTAGCCAAACGACACCCAGCTCTCAATGCCATT...GATACTCCTTCCTTCAAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGATTCACACAATCCGTaGCCTGATGAGGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCDSHNP*PDEVQG
Trigger: TCCCTGGACCTCATCAGGCCACGGATTGTGTGAATC...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CCA 90 bp TTCACTCTTGTAAACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGAGGGACAGTGAATCCTaGGACACATTCTCCTTCATA +
Preference number: 4 (lower is better)
Translates to: FTLVNSQHIPVGSINFRERDSES*DTFSFI
Trigger: TATGAAGGAGAATGTGTCCCAGGATTCACTGTCCCT...CTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTTTACAAGAGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR CCA 90 bp ACTCAGGCTTTCAAAGGGTTGAGGAAAGGTCTTTTGTTTGAAGGAAGGAGTATCGGGTCACTAATGATATaGCTTATCCTCTCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: TQAFKGLRKGLLFEGRSIGSLMI*LILSVP
Trigger: GGGGACTGAGAGGATAAGCCATATCATTAGTGACCC...GATACTCCTTCCTTCAAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACGGGTCACTAATGATATaGCTTATCCTCTCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYGSLMI*LILSVP
Trigger: GGGGACTGAGAGGATAAGCCATATCATTAGTGACCC...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CCA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTACATTTGCCTGTCTaGCAGAGCAGTGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCVHLPV*QSSVLV
Trigger: CACCAGCACACTGCTCTGCCAGACAGGCAAATGTAC...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CCA 90 bp CACTTCACCTGGACTTTCATTAACATGGACCTAATTTCCTGTCTGCTAAAACAAGTACATTTGCCTGTCTaGCAGAGCAGTGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: HFTWTFINMDLISCLLKQVHLPV*QSSVLV
Trigger: CACCAGCACACTGCTCTGCCAGACAGGCAAATGTAC...TTGTTTTAGCAGACAGGAAATTAGGTCCATGTTAATGAAAGTCCAGGTGAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553588.1
CDS-3UTR CCA 90 bp GAGTTGGTTCTGGTGGTGAAAGGACTGGGAATGTCGATTAAGATATGCAAGACTTACTTCCCCAAAGCATaGCCCCAAGAAGCCATTATT +
Preference number: 4 (lower is better)
Translates to: ELVLVVKGLGMSIKICKTYFPKA*PQEAII
Trigger: AATAATGGCTTCTTGGGGCCATGCTTTGGGGAAGTA...AGTCTTGCATATCTTAATCGACATTCCCAGTCCTTTCACCACCAGAACCAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CCA 90 bp ATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAGATACTTCCCCAAAGCATaGCCCCAAGAAGCCATTATT +
Preference number: 4 (lower is better)
Translates to: ICVCVCVCVCIHTSSFSRYFPKA*PQEAII
Trigger: AATAATGGCTTCTTGGGGCCATGCTTTGGGGAAGTA...TCTACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CCA 90 bp CTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGAGCCCCCTCCAAATCTaGTACCAGGTAAACAAGCTA +
Preference number: 4 (lower is better)
Translates to: LNHLLHYTNLCVCVCVCVSPLQI*YQVNKL
Trigger: TAGCTTGTTTACCTGGTACCAGATTTGGAGGGGGCT...CACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp GAGTTGGTTCTGGTGGTGAAAGGACTGGGAATGTCGATTAAGATATGCAAGACTGGGGAAAAACCTGTGTaGCTCAGAATCACAGTAATG +
Preference number: 4 (lower is better)
Translates to: ELVLVVKGLGMSIKICKTGEKPV*LRITVM
Trigger: CATTACTGTGATTCTGAGCCACACAGGTTTTTCCCC...AGTCTTGCATATCTTAATCGACATTCCCAGTCCTTTCACCACCAGAACCAACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp CAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAGGGGAAAAACCTGTGTaGCTCAGAATCACAGTAATG +
Preference number: 4 (lower is better)
Translates to: QSVCVCVCVCVYTRPLSVGEKPV*LRITVM
Trigger: CATTACTGTGATTCTGAGCCACACAGGTTTTTCCCC...TACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp ACTCAGGCTTTCAAAGGGTTGAGGAAAGGTCTTTTGTTTGAAGGAAGGAGTATCCCGTGGCAAAGCCTATaGTTCTCAAACTTGAGCATG +
Preference number: 4 (lower is better)
Translates to: TQAFKGLRKGLLFEGRSIPWQSL*FSNLSM
Trigger: CATGCTCAAGTTTGAGAACCATAGGCTTTGCCACGG...GATACTCCTTCCTTCAAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp TGGAGGTTTTCACTAATAGGCCATGATCATGGGACCAATCACTGCATGAGTCATCTGTGTTGCATAGGCTaGTCTTCAACTCCTGCAATA +
Preference number: 4 (lower is better)
Translates to: WRFSLIGHDHGTNHCMSHLCCIG*SSTPAI
Trigger: TATTGCAGGAGTTGAAGACCAGCCTATGCAACACAG...ATGACTCATGCAGTGATTGGTCCCATGATCATGGCCTATTAGTGAAAACCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp TTGGAACTTCCTCAAATGATATTAAAAGCTCTACACAAAAGGTATGCAGAAGCAGCAGTGGCCAGATCATaGCTCACTGCACCCTCAACC +
Preference number: 4 (lower is better)
Translates to: LELPQMILKALHKRYAEAAVARS*LTAPST
Trigger: GGTTGAGGGTGCAGTGAGCCATGATCTGGCCACTGC...TGCTTCTGCATACCTTTTGTGTAGAGCTTTTAATATCATTTGAGGAAGTTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp CCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTCAATATTTAAATTTCCCGAGGCTGTTATGTaGTGGGGGAGGGCTGAGATT +
Preference number: 4 (lower is better)
Translates to: PYLLRTQFHTGLNSIFKFPEAVM*WGRAEI
Trigger: AATCTCAGCCCTCCCCCACCACATAACAGCCTCGGG...AAATTTAAATATTGAGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp ATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAGAAGTAGAAGTCACTGGTaGGTGAATCCAGCAAGAACA +
Preference number: 4 (lower is better)
Translates to: ICVCVCVCVCIHTSSFSRSRSHW*VNPART
Trigger: TGTTCTTGCTGGATTCACCCACCAGTGACTTCTACT...TCTACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp AGTGGCCCACAGCTTATGCATATGTACATGCCCTCCAACAGTTCAGTTTGTAAATGCATTAAGGTGGTATaGCAAAGGAACTCACTGGCA +
Preference number: 4 (lower is better)
Translates to: SGPQLMHMYMPSNSSVCKCIKVV*QRNSLA
Trigger: TGCCAGTGAGTTCCTTTGCCATACCACCTTAATGCA...TTTACAAACTGAACTGTTGGAGGGCATGTACATATGCATAAGCTGTGGGCCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCACTACCTCACTGGGCTTaGAGGAGGAACAAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSLPHWA*RRNKGG
Trigger: ACCTCCCTTGTTCCTCCTCCAAGCCCAGTGAGGTAG...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp ACTCAGGCTTTCAAAGGGTTGAGGAAAGGTCTTTTGTTTGAAGGAAGGAGTATCTGTTCAATCAGTGACTaGGGCAATGGTTCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: TQAFKGLRKGLLFEGRSICSISD*GNGSGG
Trigger: TCCACCAGAACCATTGCCCCAGTCACTGATTGAACA...GATACTCCTTCCTTCAAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp GGCTCAAAGGCAAGCCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTGATGTTGCTTCCAAATaGCAGACCACCAAATACATA +
Preference number: 4 (lower is better)
Translates to: GSKASLISCEHNSIQVSTDVASK*QTTKYI
Trigger: TATGTATTTGGTGGTCTGCCATTTGGAAGCAACATC...AGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGGCTTGCCTTTGAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp AGTGGCCCACAGCTTATGCATATGTACATGCCCTCCAACAGTTCAGTTTGTAAAACTCTACTAAGTCGGTaGTTCAAGGGGAATAACCTC +
Preference number: 4 (lower is better)
Translates to: SGPQLMHMYMPSNSSVCKTLLSR*FKGNNL
Trigger: GAGGTTATTCCCCTTGAACCACCGACTTAGTAGAGT...TTTACAAACTGAACTGTTGGAGGGCATGTACATATGCATAAGCTGTGGGCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp TTCACTCTTGTAAACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGACACAGAGTAGCACATaGTCTCATCGAGGTATTGAG +
Preference number: 4 (lower is better)
Translates to: FTLVNSQHIPVGSINFRETQSST*SHRGIE
Trigger: CTCAATACCTCGATGAGACCATGTGCTACTCTGTGT...CTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTTTACAAGAGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556663.5
3UTR CAA 72 bp ATGGAAGTTCTCAAGGCCCAGTTGCTGGTGTCTCTTTaGAGGCCCCAAAACTTGGTTGATTTATCTTATTGG +
Preference number: 4 (lower is better)
Translates to: MEVLKAQLLVSL*RPQNLVDLSYW
Trigger: CCAATAAGATAAATCAACCAAGTTTTGGGGCCTCAAAAGAGACACCAGCAACTGGGCCTTGAGAACTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
3UTR CAA 72 bp ATAACCATACCGGTCTCATGGGTCATCCATTTCATCTaGAGAACTCCTACTTGCTCCTTAGCTTTCACCAAC +
Preference number: 4 (lower is better)
Translates to: ITIPVSWVIHFI*RTPTCSLAFTN
Trigger: GTTGGTGAAAGCTAAGGAGCAAGTAGGAGTTCTCAAGATGAAATGGATGACCCATGAGACCGGTATGGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556372.2
CDS-3UTR TCA 90 bp CCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTCAATATTTAAATTTGTATGCTCTGCCAGGTaGGTGAAGTCAGAACGACGC +
Preference number: 4 (lower is better)
Translates to: PYLLRTQFHTGLNSIFKFVCSAR*VKSERR
Trigger: GCGTCGTTCTGACTTCACTCACCTGGCAGAGCATAC...AAATTTAAATATTGAGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR TCA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTCTCATAGCTCCAATCTaGCACCTTCAGCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCLIAPI*HLQLLL
Trigger: CAGCAGAAGCTGAAGGTGTCAGATTGGAGCTATGAG...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR TCA 90 bp CACTGTATTCATAGGGCTAGTGCTGATGCCCCAATAAAAAGTTCTTTGATAAAAGGTGAACACCTTCGGTaGGAAGCATCGGCAAGAACA +
Preference number: 4 (lower is better)
Translates to: HCIHRASADAPIKSSLIKGEHLR*EASART
Trigger: TGTTCTTGCCGATGCTTCTCACCGAAGGTGTTCACC...TTTTATCAAAGAACTTTTTATTGGGGCATCAGCACTAGCCCTATGAATACAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp GGCTCAAAGGCAAGCCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTAGCTGTAGTAAATGTTaGGACAGCAATAACAAGGTA +
Preference number: 4 (lower is better)
Translates to: GSKASLISCEHNSIQVSTSCSKC*DSNNKV
Trigger: TACCTTGTTATTGCTGTCTCAACATTTACTACAGCT...AGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGGCTTGCCTTTGAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR TCA 90 bp GAGTTGGTTCTGGTGGTGAAAGGACTGGGAATGTCGATTAAGATATGCAAGACTGCCCCAAAACTTGGTTaGTTTATCTTATTGGCACTC +
Preference number: 4 (lower is better)
Translates to: ELVLVVKGLGMSIKICKTAPKLG*FILLAL
Trigger: GAGTGCCAATAAGATAAATCAACCAAGTTTTGGGGC...AGTCTTGCATATCTTAATCGACATTCCCAGTCCTTTCACCACCAGAACCAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR TCA 90 bp TTGGAACTTCCTCAAATGATATTAAAAGCTCTACACAAAAGGTATGCAGAAGCACCATCGCATCAGCAATaGCTGTGCCAGCCTAGTTCC +
Preference number: 4 (lower is better)
Translates to: LELPQMILKALHKRYAEAPSHQQ*LCQPSS
Trigger: GGAACTAGGCTGGCACAGTCATTGCTGATGCGATGG...TGCTTCTGCATACCTTTTGTGTAGAGCTTTTAATATCATTTGAGGAAGTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGCAGAGGGAAGCAGCTaGCAAGAGCTAACTGCTTTT +
Preference number: 4 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCAEGSS*QELTAF
Trigger: AAAAGCAGTTAGCTCTTGTCAGCTGCTTCCCTCTGC...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp GAGTTGGTTCTGGTGGTGAAAGGACTGGGAATGTCGATTAAGATATGCAAGACTGCATTTAGTTCTGAGTaGTGGAACTCACCATTTTCC +
Preference number: 4 (lower is better)
Translates to: ELVLVVKGLGMSIKICKTAFSSE*WNSPFS
Trigger: GGAAAATGGTGAGTTCCATCACTCAGAACTAAATGC...AGTCTTGCATATCTTAATCGACATTCCCAGTCCTTTCACCACCAGAACCAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCGCTATGCATATTCCCTaGAAAGACAGAACTTGGATT +
Preference number: 4 (lower is better)
Translates to: CKSVHISVPALYAQWASCAMHIP*KDRTWI
Trigger: AATCCAAGTTCTGTCTTTTCAGGGAATATGCATAGC...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACAACAGCCTACAGACATaGGCATCTGAGGAAATGAGA +
Preference number: 4 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYNSLQT*ASEEMR
Trigger: TCTCATTTCCTCAGATGCTCATGTCTGTAGGCTGTT...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp ATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAGAAGGCTTTCAAAGGGTTaGGGAAAGGTCTTTTGTTTG +
Preference number: 4 (lower is better)
Translates to: ICVCVCVCVCIHTSSFSRRLSKG*GKVFCL
Trigger: CAAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCT...TCTACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp CTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCTTTTTAAAGACTaGAACCCATCCCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: LNHLLHYTNLCVCVCVCVFLFKD*NPSPPP
Trigger: GGGAGGTGGGGATGGGTTTCAGTCTTTAAAAAGAAA...CACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp GAGTTGGTTCTGGTGGTGAAAGGACTGGGAATGTCGATTAAGATATGCAAGACTATAAGTAAACAGGAGTaGCCCACCTTAGAATCTCAC +
Preference number: 4 (lower is better)
Translates to: ELVLVVKGLGMSIKICKTISKQE*PTLESH
Trigger: GTGAGATTCTAAGGTGGGTCACTCCTGTTTACTTAT...AGTCTTGCATATCTTAATCGACATTCCCAGTCCTTTCACCACCAGAACCAACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGCAGGACACAGGCATATaGCTACTAATCAGATCCACC +
Preference number: 4 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVQDTGI*LLIRST
Trigger: GGTGGATCTGATTAGTAGTCATATGCCTGTGTCCTG...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp GAGTTGGTTCTGGTGGTGAAAGGACTGGGAATGTCGATTAAGATATGCAAGACTACACTTGCAGTGCTCTaGATAAACCATGCTTTTACC +
Preference number: 4 (lower is better)
Translates to: ELVLVVKGLGMSIKICKTTLAVL*INHAFT
Trigger: GGTAAAAGCATGGTTTATTCAGAGCACTGCAAGTGT...AGTCTTGCATATCTTAATCGACATTCCCAGTCCTTTCACCACCAGAACCAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp CAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAACACTTGCAGTGCTCTaGATAAACCATGCTTTTACC +
Preference number: 4 (lower is better)
Translates to: QSVCVCVCVCVYTRPLSVTLAVL*INHAFT
Trigger: GGTAAAAGCATGGTTTATTCAGAGCACTGCAAGTGT...TACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp ACTCAGGCTTTCAAAGGGTTGAGGAAAGGTCTTTTGTTTGAAGGAAGGAGTATCATTTCCCACGGAAGGTaGTCAAGGCAATGCAAATCT +
Preference number: 4 (lower is better)
Translates to: TQAFKGLRKGLLFEGRSIISHGR*SRQCKS
Trigger: AGATTTGCATTGCCTTGATCACCTTCCGTGGGAAAT...GATACTCCTTCCTTCAAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp AGTGGCCCACAGCTTATGCATATGTACATGCCCTCCAACAGTTCAGTTTGTAAATTTATCTCTGGCTGGTaGGCTTTTGCTTGGATTCTA +
Preference number: 4 (lower is better)
Translates to: SGPQLMHMYMPSNSSVCKFISGW*AFAWIL
Trigger: TAGAATCCAAGCAAAAGCTCACCAGCCAGAGATAAA...TTTACAAACTGAACTGTTGGAGGGCATGTACATATGCATAAGCTGTGGGCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261530.12
CDS-3UTR TCA 90 bp ACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTAATGACAGTGTTTATATTATCTCCCCACTaGGCCAAGCTAACTGTGAGA +
Preference number: 4 (lower is better)
Translates to: TQLRLVGLQAIDTVMTVFILSPH*AKLTVR
Trigger: TCTCACAGTTAGCTTGGCTCAGTGGGGAGATAATAT...AAACACTGTCATTACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR TCA 90 bp CTCATGGGTCATCCATTTCATCTTGAGAACTCCTACTTGCTCCTTAGCTTTCACCAACCAGTTAACAGCTaGATTGGGGAAAGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: LMGHPFHLENSYLLLSFHQPVNS*IGEREK
Trigger: CTTTTCTCTTTCCCCAATTCAGCTGTTAACTGGTTG...GTGAAAGCTAAGGAGCAAGTAGGAGTTCTCAAGATGAAATGGATGACCCATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556372.2
CDS-3UTR GCA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTTTCTGCTCAGATGTCTaGTCCAAGGCTGAGGCTAAG +
Preference number: 4 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCFCSDV*SKAEAK
Trigger: CTTAGCCTCAGCCTTGGAGCAGACATCTGAGCAGAA...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACTCACCAAGCTTATTCTaGTCAGATGTCTGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYSPSLF*SDVCSK
Trigger: CTTGGAGCAGACATCTGAGCAGAATAAGCTTGGTGA...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp ACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTAATGACAGTGTTTTCACCAAGCTTATTCTaGTCAGATGTCTGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: TQLRLVGLQAIDTVMTVFSPSLF*SDVCSK
Trigger: CTTGGAGCAGACATCTGAGCAGAATAAGCTTGGTGA...AAACACTGTCATTACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR GCA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCAGCAGCAGGTATGCTCTaGCAGGTGAGTGAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSAAGML*QVSEVR
Trigger: TCTGACTTCACTCACCTGGCAGAGCATACCTGCTGC...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCAAGGAGTCAGATTCATaGCAAGAATGTTGCTTACTC +
Preference number: 4 (lower is better)
Translates to: CKSVHISVPALYAQWASCKESDS*QECCLL
Trigger: GAGTAAGCAACATTCTTGGCATGAATCTGACTCCTT...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACGAGTGGTCGACAAGGTaGATTTTCAGTAAAGGAGTC +
Preference number: 4 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYEWSTR*IFSKGV
Trigger: GACTCCTTTACTGAAAATGCACCTTGTCGACCACTC...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCAGCCCAGTGTCACTGCTaGTACACACACTGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSAQCHC*YTHCWF
Trigger: AAACCAGCAGTGTGTGTAGCAGCAGTGACACTGGGC...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCATGTGGCTTTCTCTGCTaGAGAGGTCCTCACCAACCA +
Preference number: 4 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSCGFLC*RGPHQP
Trigger: TGGTTGGTGAGGACCTCTGCAGCAGAGAAAGCCACA...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCAGTCTGTGGCTTTCTCTaGTGCAGAGGTCCTCACCAA +
Preference number: 4 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSVCGFL*CRGPHQ
Trigger: TTGGTGAGGACCTCTGCAGCAGAGAAAGCCACAGAC...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCACTATACTTCTACGGGTaGAGCCCACAGGGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSLYFYG*SPQGRE
Trigger: TTCCCTTCCCTGTGGGCTGCACCCGTAGAAGTATAG...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCAGACTGCATCCACAGCTaGTACAGTAAGCCACTCTGC +
Preference number: 4 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSDCIHS*YSKPLC
Trigger: GCAGAGTGGCTTACTGTAGCAGCTGTGGATGCAGTC...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp CACTGTATTCATAGGGCTAGTGCTGATGCCCCAATAAAAAGTTCTTTGATAAAAGACTGCATCCACAGCTaGTACAGTAAGCCACTCTGC +
Preference number: 4 (lower is better)
Translates to: HCIHRASADAPIKSSLIKDCIHS*YSKPLC
Trigger: GCAGAGTGGCTTACTGTAGCAGCTGTGGATGCAGTC...TTTTATCAAAGAACTTTTTATTGGGGCATCAGCACTAGCCCTATGAATACAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCACAGAGACCTTTAATATaGTTTCCTAGAAGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSQRPLI*FPRSLQ
Trigger: CTGCAGGCTTCTAGGAAAGCATATTAAAGGTCTCTG...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp CACTGTATTCATAGGGCTAGTGCTGATGCCCCAATAAAAAGTTCTTTGATAAAAGAGCCCATTCACAGTTaGCTGGTAGAGAAACAGCCC +
Preference number: 4 (lower is better)
Translates to: HCIHRASADAPIKSSLIKEPIHS*LVEKQP
Trigger: GGGCTGTTTCTCTACCAGGCAACTGTGAATGGGCTC...TTTTATCAAAGAACTTTTTATTGGGGCATCAGCACTAGCCCTATGAATACAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCCTTAGGAATCAGTTGTaGCTTGGTACAGAAAGGATA +
Preference number: 4 (lower is better)
Translates to: CKSVHISVPALYAQWASCLRNQL*LGTERI
Trigger: TATCCTTTCTGTACCAAGGCACAACTGATTCCTAAG...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp GAGTTGGTTCTGGTGGTGAAAGGACTGGGAATGTCGATTAAGATATGCAAGACTTGCTACACACACTGCTaGTTTCACATTCTGACATGT +
Preference number: 4 (lower is better)
Translates to: ELVLVVKGLGMSIKICKTCYTHC*FHILTC
Trigger: ACATGTCAGAATGTGAAACCAGCAGTGTGTGTAGCA...AGTCTTGCATATCTTAATCGACATTCCCAGTCCTTTCACCACCAGAACCAACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554375.5
ENST00000621494.1
CDS-3UTR CCA 90 bp AACACATTCCAGTTGGCTCCATTAACTTCAGGGAGTTCTGTAGCACCTCTGATTTGCTACACACACTGCTaGTTTCACATTCTGACATGT +
Preference number: 4 (lower is better)
Translates to: NTFQLAPLTSGSSVAPLICYTHC*FHILTC
Trigger: ACATGTCAGAATGTGAAACCAGCAGTGTGTGTAGCA...AATCAGAGGTGCTACAGAACTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR CCA 90 bp ACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTAATGACAGTGTTTAGGGACAGTGAATCCTaGGACACATTCTCCTTCATA +
Preference number: 4 (lower is better)
Translates to: TQLRLVGLQAIDTVMTVFRDSES*DTFSFI
Trigger: TATGAAGGAGAATGTGTCCCAGGATTCACTGTCCCT...AAACACTGTCATTACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR CCA 90 bp GGCTCAAAGGCAAGCCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTTGCAGAAGCAGTTACTaGTTTTTCAAGAACAAAGAC +
Preference number: 4 (lower is better)
Translates to: GSKASLISCEHNSIQVSTCRSSY*FFKNKD
Trigger: GTCTTTGTTCTTGAAAAACCAGTAACTGCTTCTGCA...AGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGGCTTGCCTTTGAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CCA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACAGTAGAAGTCACTGGTaGGTGAATCCAGCAAGAACA +
Preference number: 4 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYSRSHW*VNPART
Trigger: TGTTCTTGCTGGATTCACCCACCAGTGACTTCTACT...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp AGTGGCCCACAGCTTATGCATATGTACATGCCCTCCAACAGTTCAGTTTGTAAAAATAGTAGAAGTCACTaGTGGGTGAATCCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: SGPQLMHMYMPSNSSVCKNSRSH*WVNPAR
Trigger: TCTTGCTGGATTCACCCACCAGTGACTTCTACTATT...TTTACAAACTGAACTGTTGGAGGGCATGTACATATGCATAAGCTGTGGGCCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCGGAATAACCTCAGACTaGTATCATGCTAGAACATGT +
Preference number: 4 (lower is better)
Translates to: CKSVHISVPALYAQWASCGITSD*YHARTC
Trigger: ACATGTTCTAGCATGATACCAGTCTGAGGTTATTCC...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp TGCTCTGAAGTACTGAGATTCAGTCCTAGCAAGAGATTACCAATAACTCAACAGTGTGAGCCAGCAGATTaGTTTTATCCCATGGGCACT +
Preference number: 4 (lower is better)
Translates to: CSEVLRFSPSKRLPITQQCEPAD*FYPMGT
Trigger: AGTGCCCATGGGATAAAACCAATCTGCTGGCTCACA...CTGTTGAGTTATTGGTAATCTCTTGCTAGGACTGAATCTCAGTACTTCAGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp GAAAGTGGAACCCCAAGTTTCACTGTATTCATAGGGCTAGTGCTGATGCCCCAACCTAATTTAAAATGCTaGTCAGTCAGAAGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: ESGTPSFTVFIGLVLMPQPNLKC*SVRSCS
Trigger: TGAACAGCTTCTGACTGACCAGCATTTTAAATTAGG...TTGGGGCATCAGCACTAGCCCTATGAATACAGTGAAACTTGGGGTTCCACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp AGTGGCCCACAGCTTATGCATATGTACATGCCCTCCAACAGTTCAGTTTGTAAATGTGTCAGGCTAACATaGAACACCAGAGGGAATAAA +
Preference number: 4 (lower is better)
Translates to: SGPQLMHMYMPSNSSVCKCVRLT*NTRGNK
Trigger: TTTATTCCCTCTGGTGTTCCATGTTAGCCTGACACA...TTTACAAACTGAACTGTTGGAGGGCATGTACATATGCATAAGCTGTGGGCCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261530.12
CDS-3UTR CCA 90 bp ACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTAATGACAGTGTTTGTACCAACTACCACCTaGAAGCTACCAGGTATAGAA +
Preference number: 4 (lower is better)
Translates to: TQLRLVGLQAIDTVMTVFVPTTT*KLPGIE
Trigger: TTCTATACCTGGTAGCTTCCAGGTGGTAGTTGGTAC...AAACACTGTCATTACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556663.5
3UTR CAA 72 bp CCTTTTCCAACTAGATTCATGCCCACCCACCTCCCTTaGATAAAGAAATCTGGAGTTTCCATTGATAAGGAC +
Preference number: 4 (lower is better)
Translates to: PFPTRFMPTHLP*IKKSGVSIDKD
Trigger: GTCCTTATCAATGGAAACTCCAGATTTCTTTATCAAAGGGAGGTGGGTGGGCATGAATCTAGTTGGAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CAA 72 bp CATCGCATCAGCAATGACTGTGCCAGCCTAGTTCCTTaGTCTCAACACTCTGTATCTTTTTCAATTCCAAGT +
Preference number: 4 (lower is better)
Translates to: HRISNDCASLVP*SQHSVSFSIPS
Trigger: ACTTGGAATTGAAAAAGATACAGAGTGTTGAGACAAAGGAACTAGGCTGGCACAGTCATTGCTGATGCGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CAA 72 bp CCAGTTTGCAATAAGCTGCTGACAACAGGAGGGAGTTaGACATCAATACTGAGAGCAATTCAAATCGTTACC +
Preference number: 4 (lower is better)
Translates to: PVCNKLLTTGGS*TSILRAIQIVT
Trigger: GGTAACGATTTGAATTGCTCTCAGTATTGATGTCAAACTCCCTCCTGTTGTCAGCAGCTTATTGCAAACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTAGTCCTATTTTCTGCTaGTTCACACAATCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCSPIFC*FTQSVA
Trigger: GGCCACGGATTGTGTGAATCAGCAGAAAATAGGACT...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR TCA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGCTGGTTTCACATTCTaGCATGTTCTCATCAGAGCC +
Preference number: 4 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCAGFTF*HVLIRA
Trigger: GGCTCTGATGAGAACATGTCAGAATGTGAAACCAGC...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR TCA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCATCTACTTCAGAACAATaGTCAGGAGCCCACTTGGGC +
Preference number: 4 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSSTSEQ*SGAHLG
Trigger: GCCCAAGTGGGCTCCTGATCATTGTTCTGAAGTAGA...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR TCA 90 bp TTGGAACTTCCTCAAATGATATTAAAAGCTCTACACAAAAGGTATGCAGAAGCAGGTGAACACCTTCGGTaGGAAGCATCGGCAAGAACA +
Preference number: 4 (lower is better)
Translates to: LELPQMILKALHKRYAEAGEHLR*EASART
Trigger: TGTTCTTGCCGATGCTTCTCACCGAAGGTGTTCACC...TGCTTCTGCATACCTTTTGTGTAGAGCTTTTAATATCATTTGAGGAAGTTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR TCA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACGCCCCAAAACTTGGTTaGTTTATCTTATTGGCACTC +
Preference number: 4 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYAPKLG*FILLAL
Trigger: GAGTGCCAATAAGATAAATCAACCAAGTTTTGGGGC...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR TCA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGAGGCCCCTGAATGAATaGCAGACACTCCTGATAATA +
Preference number: 4 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVRPLNE*QTLLII
Trigger: TATTATCAGGAGTGTCTGTCATTCATTCAGGGGCCT...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACATAAGCATCTCAGACTaGCTCAGGTCTATCACTGAA +
Preference number: 4 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYISISD*LRSITE
Trigger: TTCAGTGATAGACCTGAGTCAGTCTGAGATGCTTAT...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCACATATTCTGAAATGCTaGATCCACGAGTCAGACAAT +
Preference number: 4 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSHILKC*IHESDN
Trigger: ATTGTCTGACTCGTGGATTCAGCATTTCAGAATATG...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp ATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAGACTGCAAAAATTGAAATaGGAGCTTAACAGCCTACAG +
Preference number: 4 (lower is better)
Translates to: ICVCVCVCVCIHTSSFSRLQKLK*ELNSLQ
Trigger: CTGTAGGCTGTTAAGCTCTCATTTCAATTTTTGCAG...TCTACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACTTAAAAACATTTGATTaGGGGGTCAGCAAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYLKTFD*GVSKGQ
Trigger: CTGACCCTTGCTGACCCCTCAATCAAATGTTTTTAA...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCACAGTCTGTGCTAGACTaGCCTACCAAACAACTCCAC +
Preference number: 4 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSQSVLD*PTKQLH
Trigger: GTGGAGTTGTTTGGTAGGTCAGTCTAGCACAGACTG...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp TTGGAACTTCCTCAAATGATATTAAAAGCTCTACACAAAAGGTATGCAGAAGCACATACAGGTGTTCACTaGAATAACGGAGGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: LELPQMILKALHKRYAEAHTGVH*NNGGGG
Trigger: GCCGCCACCTCCGTTATTTCAGTGAACACCTGTATG...TGCTTCTGCATACCTTTTGTGTAGAGCTTTTAATATCATTTGAGGAAGTTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp ATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAGACACTTAATAGATATGTaGCTCGAGCAAGTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: ICVCVCVCVCIHTSSFSRHLIDM*LEQVCL
Trigger: CAGACAAACTTGCTCGAGTCACATATCTATTAAGTG...TCTACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGATTTCCCACGGAAGGTaGTCAAGGCAATGCAAATCT +
Preference number: 4 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVISHGR*SRQCKS
Trigger: AGATTTGCATTGCCTTGATCACCTTCCGTGGGAAAT...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp ATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAGAAGAAACATTATCTCGTaGGTCACACCCTTTAGCATT +
Preference number: 4 (lower is better)
Translates to: ICVCVCVCVCIHTSSFSRRNIIS*VTPFSI
Trigger: AATGCTAAAGGGTGTGACTCACGAGATAATGTTTCT...TCTACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp ATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAGATCATGCCAAGAATGTTaGTTACTCTTGACAATGGCA +
Preference number: 4 (lower is better)
Translates to: ICVCVCVCVCIHTSSFSRSCQEC*LLLTMA
Trigger: TGCCATTGTCAAGAGTAAGCAACATTCTTGGCATGA...TCTACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp GAGTTGGTTCTGGTGGTGAAAGGACTGGGAATGTCGATTAAGATATGCAAGACTTCATGCCAAGAATGTTaGTTACTCTTGACAATGGCA +
Preference number: 4 (lower is better)
Translates to: ELVLVVKGLGMSIKICKTSCQEC*LLLTMA
Trigger: TGCCATTGTCAAGAGTAAGCAACATTCTTGGCATGA...AGTCTTGCATATCTTAATCGACATTCCCAGTCCTTTCACCACCAGAACCAACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554375.5
ENST00000621494.1
CDS-3UTR GCA 90 bp CTTGTAAACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGTTCTGTTCATGCCAAGAATGTTaGTTACTCTTGACAATGGCA +
Preference number: 4 (lower is better)
Translates to: LVNSQHIPVGSINFREFCSCQEC*LLLTMA
Trigger: TGCCATTGTCAAGAGTAAGCAACATTCTTGGCATGA...ACAGAACTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTTTACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR GCA 90 bp AACACATTCCAGTTGGCTCCATTAACTTCAGGGAGTTCTGTAGCACCTCTGATTAAGGAGTCAGATTCATaGCAAGAATGTTGCTTACTC +
Preference number: 4 (lower is better)
Translates to: NTFQLAPLTSGSSVAPLIKESDS*QECCLL
Trigger: GAGTAAGCAACATTCTTGGCATGAATCTGACTCCTT...AATCAGAGGTGCTACAGAACTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR GCA 90 bp TGCTCTGAAGTACTGAGATTCAGTCCTAGCAAGAGATTACCAATAACTCAACAGGAGTGGTCGACAAGGTaGATTTTCAGTAAAGGAGTC +
Preference number: 4 (lower is better)
Translates to: CSEVLRFSPSKRLPITQQEWSTR*IFSKGV
Trigger: GACTCCTTTACTGAAAATGCACCTTGTCGACCACTC...CTGTTGAGTTATTGGTAATCTCTTGCTAGGACTGAATCTCAGTACTTCAGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp GGCTCAAAGGCAAGCCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTCTTTCCTTCCTGTTTTaGTTAGGAAAGTCCTATTTT +
Preference number: 4 (lower is better)
Translates to: GSKASLISCEHNSIQVSTLSFLF*LGKSYF
Trigger: AAAATAGGACTTTCCTAAGCAAAACAGGAAGGAAAG...AGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGGCTTGCCTTTGAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp AACATCCAGGGAGTAAAGGGGAGACAGGGGATTGAACTTCTGCTCCATACGTTTCTTTCCTTCCTGTTTTaGTTAGGAAAGTCCTATTTT +
Preference number: 4 (lower is better)
Translates to: NIQGVKGRQGIELLLHTFLSFLF*LGKSYF
Trigger: AAAATAGGACTTTCCTAAGCAAAACAGGAAGGAAAG...AAACGTATGGAGCAGAAGTTCAATCCCCTGTCTCCCCTTTACTCCCTGGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR GCA 90 bp TTGGAACTTCCTCAAATGATATTAAAAGCTCTACACAAAAGGTATGCAGAAGCATCCCCAGTGTACATTTaGCTGTCTGGCAGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: LELPQMILKALHKRYAEASPVYI*LSGRAV
Trigger: CACTGCTCTGCCAGACAGGCAAATGTACACTGGGGA...TGCTTCTGCATACCTTTTGTGTAGAGCTTTTAATATCATTTGAGGAAGTTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp CCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTCAATATTTAAATTTGTCTGTGGCTTTCTCTaGTGCAGAGGTCCTCACCAA +
Preference number: 4 (lower is better)
Translates to: PYLLRTQFHTGLNSIFKFVCGFL*CRGPHQ
Trigger: TTGGTGAGGACCTCTGCAGCAGAGAAAGCCACAGAC...AAATTTAAATATTGAGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp TTGGAACTTCCTCAAATGATATTAAAAGCTCTACACAAAAGGTATGCAGAAGCATGGAGGGTGAAGTCCTaGTCTCTAGCTGTATCCAGG +
Preference number: 4 (lower is better)
Translates to: LELPQMILKALHKRYAEAWRVKS*SLAVSR
Trigger: CCTGGATACAGCTAGAGAGCAGGACTTCACCCTCCA...TGCTTCTGCATACCTTTTGTGTAGAGCTTTTAATATCATTTGAGGAAGTTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCTCTACACAAAAGGTATaGAGAAGCAGTTACTGGTTT +
Preference number: 4 (lower is better)
Translates to: CKSVHISVPALYAQWASCSTQKV*RSSYWF
Trigger: AAACCAGTAACTGCTTCTGCATACCTTTTGTGTAGA...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp CCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTCAATATTTAAATTTACTCTCCCACACTACTaGATGAGAACCAGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: PYLLRTQFHTGLNSIFKFTLPHY*MRTRGG
Trigger: TCCACCCCTGGTTCTCATGCAGTAGTGTGGGAGAGT...AAATTTAAATATTGAGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp GGCTCAAAGGCAAGCCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTTTACTTAACAAAGGATaGTACAAGCATCACAGACTA +
Preference number: 4 (lower is better)
Translates to: GSKASLISCEHNSIQVSTLLNKG*YKHHRL
Trigger: TAGTCTGTGATGCTTGTAGCATCCTTTGTTAAGTAA...AGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGGCTTGCCTTTGAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCATACAGTAAGCCACTCTaGTCTCAGCCCAGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSYSKPL*SQPSSD
Trigger: ATCTGAGCTGGGCTGAGAGCAGAGTGGCTTACTGTA...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp AGTGGCCCACAGCTTATGCATATGTACATGCCCTCCAACAGTTCAGTTTGTAAAAATGTCTTCATGACATaGCCCATTCTTCAACACTGT +
Preference number: 4 (lower is better)
Translates to: SGPQLMHMYMPSNSSVCKNVFMT*PILQHC
Trigger: ACAGTGTTGAAGAATGGGGCATGTCATGAAGACATT...TTTACAAACTGAACTGTTGGAGGGCATGTACATATGCATAAGCTGTGGGCCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACCCACCTTGCCAAGATTaGTTCTTTGCTGAATGTCTT +
Preference number: 4 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYPPCQD*FFAECL
Trigger: AAGACATTCAGCAAAGAAGCAATCTTGGCAAGGTGG...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTCACATTGAGAATTCCTaGTCTGGGCATCTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCHIENS*SGHLPF
Trigger: GAAAGGGAGATGCCCAGAGCAGGAATTCTCAATGTG...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp GAGTTGGTTCTGGTGGTGAAAGGACTGGGAATGTCGATTAAGATATGCAAGACTTTAGAATGGCCAGTTTaGAATAAGCTGCTGACAACA +
Preference number: 4 (lower is better)
Translates to: ELVLVVKGLGMSIKICKTLEWPV*NKLLTT
Trigger: TGTTGTCAGCAGCTTATTGCAAACTGGCCATTCTAA...AGTCTTGCATATCTTAATCGACATTCCCAGTCCTTTCACCACCAGAACCAACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp GAGTTGGTTCTGGTGGTGAAAGGACTGGGAATGTCGATTAAGATATGCAAGACTGTGCTTTTAAGTTGGTaGATTAAGGTGGTATGGCAA +
Preference number: 4 (lower is better)
Translates to: ELVLVVKGLGMSIKICKTVLLSW*IKVVWQ
Trigger: TTGCCATACCACCTTAATGCACCAACTTAAAAGCAC...AGTCTTGCATATCTTAATCGACATTCCCAGTCCTTTCACCACCAGAACCAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp CACTGTATTCATAGGGCTAGTGCTGATGCCCCAATAAAAAGTTCTTTGATAAAAGCACAATGGGCCAGTTaGAGTAGGGTTTCCACGAAT +
Preference number: 4 (lower is better)
Translates to: HCIHRASADAPIKSSLIKAQWAS*SRVSTN
Trigger: ATTCGTGGAAACCCTACTGCAACTGGCCCATTGTGC...TTTTATCAAAGAACTTTTTATTGGGGCATCAGCACTAGCCCTATGAATACAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp TGGAGGTTTTCACTAATAGGCCATGATCATGGGACCAATCACTGCATGAGTCATCAACCTTGCCTGATATaGAGACTACAACTCATTTTC +
Preference number: 4 (lower is better)
Translates to: WRFSLIGHDHGTNHCMSHQPCLI*RLQLIF
Trigger: GAAAATGAGTTGTAGTCTGCATATCAGGCAAGGTTG...ATGACTCATGCAGTGATTGGTCCCATGATCATGGCCTATTAGTGAAAACCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCAAGCTTAGCAAGAAATaGACAAAACCTACACAAGGA +
Preference number: 4 (lower is better)
Translates to: CKSVHISVPALYAQWASCKLSKK*TKPTQG
Trigger: TCCTTGTGTAGGTTTTGTGCATTTCTTGCTAAGCTT...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261530.12
CDS-3UTR GCA 90 bp ATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAGAAACCAGAAATCTTTCTaGCGAGGGTCACTAATGATA +
Preference number: 4 (lower is better)
Translates to: ICVCVCVCVCIHTSSFSRNQKSF*RGSLMI
Trigger: TATCATTAGTGACCCTCGGCAGAAAGATTTCTGGTT...TCTACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp CAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAAACCAGAAATCTTTCTaGCGAGGGTCACTAATGATA +
Preference number: 4 (lower is better)
Translates to: QSVCVCVCVCVYTRPLSVNQKSF*RGSLMI
Trigger: TATCATTAGTGACCCTCGGCAGAAAGATTTCTGGTT...TACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp TTCACTCTTGTAAACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGGGTAGTCCACAGTTCTaGCTGTCTAAACAAAATAAG +
Preference number: 4 (lower is better)
Translates to: FTLVNSQHIPVGSINFREGSPQF*LSKQNK
Trigger: CTTATTTTGTTTAGACAGGCAGAACTGTGGACTACC...CTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTTTACAAGAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556663.5
CDS-3UTR GCA 90 bp CACTTCACCTGGACTTTCATTAACATGGACCTAATTTCCTGTCTGCTAAAACAAATAACCCTGTGTGACTaGCTGACTGAACTGCCACTT +
Preference number: 4 (lower is better)
Translates to: HFTWTFINMDLISCLLKQITLCD*LTELPL
Trigger: AAGTGGCAGTTCAGTCAGGCAGTCACACAGGGTTAT...TTGTTTTAGCAGACAGGAAATTAGGTCCATGTTAATGAAAGTCCAGGTGAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553588.1
CDS-3UTR GCA 90 bp AAAAGCTCAGATGACTGGAGATTGCTGATAGTGGAATATAGGGTTTCAAACTCTCATCATATGGAGCATTaGCAACAGCCCAGAGGGTTT +
Preference number: 4 (lower is better)
Translates to: KSSDDWRLLIVEYRVSNSHHMEH*QQPRGF
Trigger: AAACCCTCTGGGCTGTTGGCAATGCTCCATATGATG...AGAGTTTGAAACCCTATATTCCACTATCAGCAATCTCCAGTCATCTGAGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553588.1
CDS-3UTR CCA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCAGAGCTGGGTGTCGTTTaGCTACCATTGTGTCATCAG +
Preference number: 4 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSELGVV*LPLCHQ
Trigger: CTGATGACACAATGGTAGCCAAACGACACCCAGCTC...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CCA 90 bp TTCTCAACGCAGGATTCTGATGTTGAACTAAACCATATGCAAATCAGATTCATTGATTCACACAATCCGTaGCCTGATGAGGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: FSTQDSDVELNHMQIRFIDSHNP*PDEVQG
Trigger: TCCCTGGACCTCATCAGGCCACGGATTGTGTGAATC...AATGAATCTGATTTGCATATGGTTTAGTTCAACATCAGAATCCTGCGTTGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR CCA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGAGGGACAGTGAATCCTaGGACACATTCTCCTTCATA +
Preference number: 4 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVRDSES*DTFSFI
Trigger: TATGAAGGAGAATGTGTCCCAGGATTCACTGTCCCT...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCAAGATGCTGTGGCCACTaGTTTCCGCTTCCTCTTGAT +
Preference number: 4 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSRCCGH*FPLPLD
Trigger: ATCAAGAGGAAGCGGAAACCAGTGGCCACAGCATCT...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CCA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGTCATTACACTTCGTATaGGAAACAGGGGCAATCGCA +
Preference number: 4 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVSLHFV*ETGAIA
Trigger: TGCGATTGCCCCTGTTTCCCATACGAAGTGTAATGA...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp TGGAGGTTTTCACTAATAGGCCATGATCATGGGACCAATCACTGCATGAGTCATGAAAATCTGAAAGTCTaGGATTCTAGTCCTGGCTTA +
Preference number: 4 (lower is better)
Translates to: WRFSLIGHDHGTNHCMSHENLKV*DSSPGL
Trigger: TAAGCCAGGACTAGAATCCCAGACTTTCAGATTTTC...ATGACTCATGCAGTGATTGGTCCCATGATCATGGCCTATTAGTGAAAACCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp ACTCAGGCTTTCAAAGGGTTGAGGAAAGGTCTTTTGTTTGAAGGAAGGAGTATCGCTATCCTCTGGAACTaGTTAATACAGAAAGCAAGC +
Preference number: 4 (lower is better)
Translates to: TQAFKGLRKGLLFEGRSIAILWN*LIQKAS
Trigger: GCTTGCTTTCTGTATTAACCAGTTCCAGAGGATAGC...GATACTCCTTCCTTCAAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp CTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGGCTATCCTCTGGAACTaGTTAATACAGAAAGCAAGC +
Preference number: 4 (lower is better)
Translates to: LNHLLHYTNLCVCVCVCVAILWN*LIQKAS
Trigger: GCTTGCTTTCTGTATTAACCAGTTCCAGAGGATAGC...CACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCAAGCCAGGTTTTAGAGTaGTGGTTCTCAGCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSSQVLE*WFSASA
Trigger: AGCTGAGGCTGAGAACCACCACTCTAAAACCTGGCT...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCTTCCAAAGAAGGAAGTaGTTATATAGCATCAGTGTC +
Preference number: 4 (lower is better)
Translates to: CKSVHISVPALYAQWASCFQRRK*LYSISV
Trigger: GACACTGATGCTATATAACCACTTCCTTCTTTGGAA...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp TGGAGGTTTTCACTAATAGGCCATGATCATGGGACCAATCACTGCATGAGTCATAGCAGAGGTATTGATTaGGAACAGACACTCTTTAAC +
Preference number: 4 (lower is better)
Translates to: WRFSLIGHDHGTNHCMSHSRGID*EQTLFN
Trigger: GTTAAAGAGTGTCTGTTCCCAATCAATACCTCTGCT...ATGACTCATGCAGTGATTGGTCCCATGATCATGGCCTATTAGTGAAAACCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp GAGTTGGTTCTGGTGGTGAAAGGACTGGGAATGTCGATTAAGATATGCAAGACTGAATCAGTTGTGCCTTaGTACAGAAAGGATAATACC +
Preference number: 4 (lower is better)
Translates to: ELVLVVKGLGMSIKICKTESVVP*YRKDNT
Trigger: GGTATTATCCTTTCTGTACCAAGGCACAACTGATTC...AGTCTTGCATATCTTAATCGACATTCCCAGTCCTTTCACCACCAGAACCAACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp AGTGGCCCACAGCTTATGCATATGTACATGCCCTCCAACAGTTCAGTTTGTAAAGAATCAGTTGTGCCTTaGTACAGAAAGGATAATACC +
Preference number: 4 (lower is better)
Translates to: SGPQLMHMYMPSNSSVCKESVVP*YRKDNT
Trigger: GGTATTATCCTTTCTGTACCAAGGCACAACTGATTC...TTTACAAACTGAACTGTTGGAGGGCATGTACATATGCATAAGCTGTGGGCCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCCCTAATTTAAAATGCTaGTCAGTCAGAAGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: CKSVHISVPALYAQWASCPNLKC*SVRSCS
Trigger: TGAACAGCTTCTGACTGACCAGCATTTTAAATTAGG...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp CAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAAGTACATATGGATCCTaGATTGAATACCGAACCAGA +
Preference number: 4 (lower is better)
Translates to: QSVCVCVCVCVYTRPLSVSTYGS*IEYRTR
Trigger: TCTGGTTCGGTATTCAATCCAGGATCCATATGTACT...TACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261530.12
CDS-3UTR TCA 90 bp TTGGAACTTCCTCAAATGATATTAAAAGCTCTACACAAAAGGTATGCAGAAGCAGTATGGTACCCTCTTTaGGCTGGCCGAGAAGGTAAA +
Preference number: 4 (lower is better)
Translates to: LELPQMILKALHKRYAEAVWYPL*AGREGK
Trigger: TTTACCTTCTCGGCCAGCTCAAAGAGGGTACCATAC...TGCTTCTGCATACCTTTTGTGTAGAGCTTTTAATATCATTTGAGGAAGTTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR TCA 90 bp CCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTCAATATTTAAATTTGTTTCCGCTTCCTCTTaGTGTCACGTGAACATGGTG +
Preference number: 4 (lower is better)
Translates to: PYLLRTQFHTGLNSIFKFVSASS*CHVNMV
Trigger: CACCATGTTCACGTGACATCAAGAGGAAGCGGAAAC...AAATTTAAATATTGAGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR TCA 90 bp TGGAGGTTTTCACTAATAGGCCATGATCATGGGACCAATCACTGCATGAGTCATAAGATTCCCACAACATaGTCTTCTGAGAGAAAGAAT +
Preference number: 4 (lower is better)
Translates to: WRFSLIGHDHGTNHCMSHKIPTT*SSERKN
Trigger: ATTCTTTCTCTCAGAAGATCATGTTGTGGGAATCTT...ATGACTCATGCAGTGATTGGTCCCATGATCATGGCCTATTAGTGAAAACCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGGCCCCAAAACTTGGTTaGTTTATCTTATTGGCACTC +
Preference number: 4 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVAPKLG*FILLAL
Trigger: GAGTGCCAATAAGATAAATCAACCAAGTTTTGGGGC...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp TTGGAACTTCCTCAAATGATATTAAAAGCTCTACACAAAAGGTATGCAGAAGCAAACTCCACATGCAGCTaGGCCATCATAAACACGCCA +
Preference number: 4 (lower is better)
Translates to: LELPQMILKALHKRYAEANSTCS*AIINTP
Trigger: TGGCGTGTTTATGATGGCTCAGCTGCATGTGGAGTT...TGCTTCTGCATACCTTTTGTGTAGAGCTTTTAATATCATTTGAGGAAGTTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTCTGTTTCCGGGCATTTaGTGTTCATCTTTTGGAGAC +
Preference number: 4 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCLFPGI*CSSFGD
Trigger: GTCTCCAAAAGATGAACATCAAATGCCCGGAAACAG...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCAGATGTCTACTCGCAGTaGCAGAAAAATTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSDVYSQ*QKNFFF
Trigger: AAAGAAGAAATTTTTCTGTCACTGCGAGTAGACATC...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp GAGTTGGTTCTGGTGGTGAAAGGACTGGGAATGTCGATTAAGATATGCAAGACTGATGTCTACTCGCAGTaGCAGAAAAATTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: ELVLVVKGLGMSIKICKTDVYSQ*QKNFFF
Trigger: AAAGAAGAAATTTTTCTGTCACTGCGAGTAGACATC...AGTCTTGCATATCTTAATCGACATTCCCAGTCCTTTCACCACCAGAACCAACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp ACTCAGGCTTTCAAAGGGTTGAGGAAAGGTCTTTTGTTTGAAGGAAGGAGTATCTTTACCAAGCATTTATaGTGTCTACTCGCAGTGACA +
Preference number: 4 (lower is better)
Translates to: TQAFKGLRKGLLFEGRSIFTKHL*CLLAVT
Trigger: TGTCACTGCGAGTAGACATCATAAATGCTTGGTAAA...GATACTCCTTCCTTCAAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCTGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp CTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGGCTATGCATATTCCCTaGAAAGACAGAACTTGGATT +
Preference number: 4 (lower is better)
Translates to: LNHLLHYTNLCVCVCVCVAMHIP*KDRTWI
Trigger: AATCCAAGTTCTGTCTTTTCAGGGAATATGCATAGC...CACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp CACTGTATTCATAGGGCTAGTGCTGATGCCCCAATAAAAAGTTCTTTGATAAAATGTTTGTTCAATCAGTaGCTGGGGCAATGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: HCIHRASADAPIKSSLIKCLFNQ*LGQWFW
Trigger: CCAGAACCATTGCCCCAGTCACTGATTGAACAAACA...TTTTATCAAAGAACTTTTTATTGGGGCATCAGCACTAGCCCTATGAATACAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp CTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGCACTTAATAGATATGTaGCTCGAGCAAGTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: LNHLLHYTNLCVCVCVCVHLIDM*LEQVCL
Trigger: CAGACAAACTTGCTCGAGTCACATATCTATTAAGTG...CACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGGGAATCAGTCAGCCATaGTTCCAAATACACCATTAC +
Preference number: 4 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVGISQP*FQIHHY
Trigger: GTAATGGTGTATTTGGAATCATGGCTGACTGATTCC...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp TGGAGGTTTTCACTAATAGGCCATGATCATGGGACCAATCACTGCATGAGTCATGGCTTAAAATATCAATaGTTGCTAAGGTGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: WRFSLIGHDHGTNHCMSHGLKYQ*LLRCSV
Trigger: GACTGAACACCTTAGCAATCATTGATATTTTAAGCC...ATGACTCATGCAGTGATTGGTCCCATGATCATGGCCTATTAGTGAAAACCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp CTTGTAAACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGTTCTGTGGTATTGAGAATGAATaGAAAACTGTTCTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LVNSQHIPVGSINFREFCGIENE*KTVLWP
Trigger: AGGCCAAAGAACAGTTTTTCATTCATTCTCAATACC...ACAGAACTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTTTACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556663.5
CDS-3UTR TCA 90 bp CTTGTAAACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGTTCTGTCCCTTGTTAAATGCCTaGAGTCAACATATTCTTAAG +
Preference number: 4 (lower is better)
Translates to: LVNSQHIPVGSINFREFCPLLNA*SQHILK
Trigger: CTTAAGAATATGTTGACTTCAGGCATTTAACAAGGG...ACAGAACTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTTTACAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556663.5
CDS-3UTR GCA 90 bp CCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTCAATATTTAAATTTTTCTGCTCAGATGTCTaGTCCAAGGCTGAGGCTAAG +
Preference number: 4 (lower is better)
Translates to: PYLLRTQFHTGLNSIFKFFCSDV*SKAEAK
Trigger: CTTAGCCTCAGCCTTGGAGCAGACATCTGAGCAGAA...AAATTTAAATATTGAGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTTCACCAAGCTTATTCTaGTCAGATGTCTGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCSPSLF*SDVCSK
Trigger: CTTGGAGCAGACATCTGAGCAGAATAAGCTTGGTGA...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp CTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGAAGGAGTCAGATTCATaGCAAGAATGTTGCTTACTC +
Preference number: 4 (lower is better)
Translates to: LNHLLHYTNLCVCVCVCVKESDS*QECCLL
Trigger: GAGTAAGCAACATTCTTGGCATGAATCTGACTCCTT...CACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp AAGTTACAGAAGACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTAAAGGAGTCAGATTCATaGCAAGAATGTTGCTTACTC +
Preference number: 4 (lower is better)
Translates to: KLQKTQLRLVGLQAIDTVKESDS*QECCLL
Trigger: GAGTAAGCAACATTCTTGGCATGAATCTGACTCCTT...TACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGTCTTCTGTAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR GCA 90 bp TTGGAACTTCCTCAAATGATATTAAAAGCTCTACACAAAAGGTATGCAGAAGCATGCCTCCAACTAGACTaGATCCACAGCTGCTACAGT +
Preference number: 4 (lower is better)
Translates to: LELPQMILKALHKRYAEACLQLD*IHSCYS
Trigger: ACTGTAGCAGCTGTGGATGCAGTCTAGTTGGAGGCA...TGCTTCTGCATACCTTTTGTGTAGAGCTTTTAATATCATTTGAGGAAGTTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTCTGACAAGAGCTAACTaGTTTTACCATCCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCLTRAN*FYHPSN
Trigger: GTTGGAGGGATGGTAAAAGCAGTTAGCTCTTGTCAG...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCACCCACTTCTCCACCTTaGCAAGATTGCTTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSPTSPP*QDCFFA
Trigger: AGCAAAGAAGCAATCTTGGCAAGGTGGAGAAGTGGG...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCAAGTTCCAGCTTTGTATaGACAATGGGCCAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSSSSFV*TMGQLQ
Trigger: CTGCAACTGGCCCATTGTGCATACAAAGCTGGAACT...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp CAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTATGGCTGGTGAGCTTTTaGTTGGATTCTATAAAATAC +
Preference number: 4 (lower is better)
Translates to: QSVCVCVCVCVYTRPLSVWLVSF*LDSIKY
Trigger: GTATTTTATAGAATCCAAGCAAAAGCTCACCAGCCA...TACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261530.12
CDS-3UTR GCA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTAACAGTGTGGTACCATaGACAAGTAGACCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCNSVVP*TSRPVE
Trigger: TTCCACTGGTCTACTTGTGCATGGTACCACACTGTT...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261530.12
CDS-3UTR GCA 90 bp TTCACTCTTGTAAACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGCCATTTAAGGAAGAATaGAGTTTTCGTGATCCAAGA +
Preference number: 4 (lower is better)
Translates to: FTLVNSQHIPVGSINFREPFKEE*SFRDPR
Trigger: TCTTGGATCACGAAAACTGCATTCTTCCTTAAATGG...CTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTTTACAAGAGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556663.5
CDS-3UTR GCA 90 bp TTAAAGTCAACAAAAATTGTGGTGTATGCCATCAACCAGTTAACAGCTGAATTGTGTCCTTCTACCACCTaGACTGGGGCTAGACAAAGA +
Preference number: 4 (lower is better)
Translates to: LKSTKIVVYAINQLTAELCPSTT*TGARQR
Trigger: TCTTTGTCTAGCCCCAGTGCAGGTGGTAGAAGGACA...CAATTCAGCTGTTAACTGGTTGATGGCATACACCACAATTTTTGTTGACTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556372.2
CDS-3UTR CCA 90 bp ACGCAGGATTCTGATGTTGAACTAAACCATATGCAAATCAGATTCATTCTGCTTAATGGCATTGAGAGCTaGGTGTCGTTTGGCTACCAT +
Preference number: 4 (lower is better)
Translates to: TQDSDVELNHMQIRFILLNGIES*VSFGYH
Trigger: ATGGTAGCCAAACGACACCCAGCTCTCAATGCCATT...AAGCAGAATGAATCTGATTTGCATATGGTTTAGTTCAACATCAGAATCCTGCGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR CCA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCATGCAGAAGCAGTTACTaGTTTTTCAAGAACAAAGAC +
Preference number: 4 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSCRSSY*FFKNKD
Trigger: GTCTTTGTTCTTGAAAAACCAGTAACTGCTTCTGCA...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp GAGTTGGTTCTGGTGGTGAAAGGACTGGGAATGTCGATTAAGATATGCAAGACTTTCATCTCCTTAAAATaGCATGACTTCGTAGAGATG +
Preference number: 4 (lower is better)
Translates to: ELVLVVKGLGMSIKICKTFISLK*HDFVEM
Trigger: CATCTCTACGAAGTCATGCCATTTTAAGGAGATGAA...AGTCTTGCATATCTTAATCGACATTCCCAGTCCTTTCACCACCAGAACCAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp AGTGGCCCACAGCTTATGCATATGTACATGCCCTCCAACAGTTCAGTTTGTAAAAAATCTCTTTACTTATaGAGGGAATATGAGAGCACC +
Preference number: 4 (lower is better)
Translates to: SGPQLMHMYMPSNSSVCKKSLYL*REYEST
Trigger: GGTGCTCTCATATTCCCTCCATAAGTAAAGAGATTT...TTTACAAACTGAACTGTTGGAGGGCATGTACATATGCATAAGCTGTGGGCCACT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCAAACTGGTCTTCAAGATaGAAAAGAAGTGTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSNWSSR*KRSVVF
Trigger: AAACACCACACTTCTTTTCCATCTTGAAGACCAGTT...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp CACTGTATTCATAGGGCTAGTGCTGATGCCCCAATAAAAAGTTCTTTGATAAAACAGGTTTTAGAGTGGTaGTTCTCAGCCTCAGCTACA +
Preference number: 4 (lower is better)
Translates to: HCIHRASADAPIKSSLIKQVLEW*FSASAT
Trigger: TGTAGCTGAGGCTGAGAACCACCACTCTAAAACCTG...TTTTATCAAAGAACTTTTTATTGGGGCATCAGCACTAGCCCTATGAATACAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTTGCATTAAGGTGGTATaGCAAAGGAACTCACTGGCA +
Preference number: 4 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCCIKVV*QRNSLA
Trigger: TGCCAGTGAGTTCCTTTGCCATACCACCTTAATGCA...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACAGCAGAGGTATTGATTaGGAACAGACACTCTTTAAC +
Preference number: 4 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYSRGID*EQTLFN
Trigger: GTTAAAGAGTGTCTGTTCCCAATCAATACCTCTGCT...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp TGGAGGTTTTCACTAATAGGCCATGATCATGGGACCAATCACTGCATGAGTCATACTTTTCTCTTGCTCTaGTCACTCTCAAGAACAAAA +
Preference number: 4 (lower is better)
Translates to: WRFSLIGHDHGTNHCMSHTFLLL*SLSRTK
Trigger: TTTTGTTCTTGAGAGTGACCAGAGCAAGAGAAAAGT...ATGACTCATGCAGTGATTGGTCCCATGATCATGGCCTATTAGTGAAAACCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp AAGTTACAGAAGACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTAATCACACTAGAGTTGTaGAAACACAGAGTAGCACAT +
Preference number: 4 (lower is better)
Translates to: KLQKTQLRLVGLQAIDTVITLEL*KHRVAH
Trigger: ATGTGCTACTCTGTGTTTCCACAACTCTAGTGTGAT...TACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGTCTTCTGTAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556663.5
CDS-3UTR CCA 90 bp AACACATTCCAGTTGGCTCCATTAACTTCAGGGAGTTCTGTAGCACCTCTGATTAAGTCACCTTTCATCTaGCTACACTTAGATTCTGTT +
Preference number: 4 (lower is better)
Translates to: NTFQLAPLTSGSSVAPLIKSPFI*LHLDSV
Trigger: AACAGAATCTAAGTGTAGCCAGATGAAAGGTGACTT...AATCAGAGGTGCTACAGAACTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556663.5
CDS-3UTR TCA 90 bp TTCTCAACGCAGGATTCTGATGTTGAACTAAACCATATGCAAATCAGATTCATTAGTCCTATTTTCTGCTaGTTCACACAATCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: FSTQDSDVELNHMQIRFISPIFC*FTQSVA
Trigger: GGCCACGGATTGTGTGAATCAGCAGAAAATAGGACT...AATGAATCTGATTTGCATATGGTTTAGTTCAACATCAGAATCCTGCGTTGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR TCA 90 bp TTCTCAACGCAGGATTCTGATGTTGAACTAAACCATATGCAAATCAGATTCATTGCTGGTTTCACATTCTaGCATGTTCTCATCAGAGCC +
Preference number: 4 (lower is better)
Translates to: FSTQDSDVELNHMQIRFIAGFTF*HVLIRA
Trigger: GGCTCTGATGAGAACATGTCAGAATGTGAAACCAGC...AATGAATCTGATTTGCATATGGTTTAGTTCAACATCAGAATCCTGCGTTGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR TCA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACAAGATTCCCACAACATaGTCTTCTGAGAGAAAGAAT +
Preference number: 4 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYKIPTT*SSERKN
Trigger: ATTCTTTCTCTCAGAAGATCATGTTGTGGGAATCTT...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR TCA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACAGCTGTAGTAAATGTTaGGACAGCAATAACAAGGTA +
Preference number: 4 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYSCSKC*DSNNKV
Trigger: TACCTTGTTATTGCTGTCTCAACATTTACTACAGCT...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR TCA 90 bp CACTGTATTCATAGGGCTAGTGCTGATGCCCCAATAAAAAGTTCTTTGATAAAATTCACTAATAGGCCATaGTCATGGGACCAATCACTG +
Preference number: 4 (lower is better)
Translates to: HCIHRASADAPIKSSLIKFTNRP*SWDQSL
Trigger: CAGTGATTGGTCCCATGATCATGGCCTATTAGTGAA...TTTTATCAAAGAACTTTTTATTGGGGCATCAGCACTAGCCCTATGAATACAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp TGCTCTGAAGTACTGAGATTCAGTCCTAGCAAGAGATTACCAATAACTCAACAGTACAGCACCTTAAAATaGGGAGCACAATTTACAACC +
Preference number: 4 (lower is better)
Translates to: CSEVLRFSPSKRLPITQQYSTLK*GAQFTT
Trigger: GGTTGTAAATTGTGCTCCTCATTTTAAGGTGCTGTA...CTGTTGAGTTATTGGTAATCTCTTGCTAGGACTGAATCTCAGTACTTCAGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGAAAGAAAACACGGTGTaGTTAAGTGGGATCACAGAA +
Preference number: 4 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVKENTV*LSGITE
Trigger: TTCTGTGATCCCACTTAATCACACCGTGTTTTCTTT...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTAACAACCAAAAAGCATaGCATCGCTATTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCNNQKA*HRYWSP
Trigger: TGGAGACCAATAGCGATGTCATGCTTTTTGGTTGTT...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp TGCTCTGAAGTACTGAGATTCAGTCCTAGCAAGAGATTACCAATAACTCAACAGCTGCAAAAATTGAAATaGGAGCTTAACAGCCTACAG +
Preference number: 4 (lower is better)
Translates to: CSEVLRFSPSKRLPITQQLQKLK*ELNSLQ
Trigger: CTGTAGGCTGTTAAGCTCTCATTTCAATTTTTGCAG...CTGTTGAGTTATTGGTAATCTCTTGCTAGGACTGAATCTCAGTACTTCAGAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp ACTCAGGCTTTCAAAGGGTTGAGGAAAGGTCTTTTGTTTGAAGGAAGGAGTATCGAAGGAAGGAGTATCTaGACATGTTTAAATGCAAAG +
Preference number: 4 (lower is better)
Translates to: TQAFKGLRKGLLFEGRSIEGRSI*TCLNAK
Trigger: CTTTGCATTTAAACATGTTCAGATACTCCTTCCTTC...GATACTCCTTCCTTCAAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCTGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTAGGCTTTCAAAGGGTTaGGGAAAGGTCTTTTGTTTG +
Preference number: 4 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCRLSKG*GKVFCL
Trigger: CAAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCT...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp TTGGAACTTCCTCAAATGATATTAAAAGCTCTACACAAAAGGTATGCAGAAGCAGAAGTCACTGGTGGGTaGATCCAGCAAGAACAGTTT +
Preference number: 4 (lower is better)
Translates to: LELPQMILKALHKRYAEAEVTGG*IQQEQF
Trigger: AAACTGTTCTTGCTGGATTCACCCACCAGTGACTTC...TGCTTCTGCATACCTTTTGTGTAGAGCTTTTAATATCATTTGAGGAAGTTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp CTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGAACTTAACTGGTAGTTaGACAACTTTGACACTGAAG +
Preference number: 4 (lower is better)
Translates to: LNHLLHYTNLCVCVCVCVNLTGS*TTLTLK
Trigger: CTTCAGTGTCAAAGTTGTTCAACTACCAGTTAAGTT...CACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp TGCTCTGAAGTACTGAGATTCAGTCCTAGCAAGAGATTACCAATAACTCAACAGTCATGCCAAGAATGTTaGTTACTCTTGACAATGGCA +
Preference number: 4 (lower is better)
Translates to: CSEVLRFSPSKRLPITQQSCQEC*LLLTMA
Trigger: TGCCATTGTCAAGAGTAAGCAACATTCTTGGCATGA...CTGTTGAGTTATTGGTAATCTCTTGCTAGGACTGAATCTCAGTACTTCAGAGCA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp CTTGTAAACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGTTCTGTCTTTCCTTCCTGTTTTaGTTAGGAAAGTCCTATTTT +
Preference number: 4 (lower is better)
Translates to: LVNSQHIPVGSINFREFCLSFLF*LGKSYF
Trigger: AAAATAGGACTTTCCTAAGCAAAACAGGAAGGAAAG...ACAGAACTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTTTACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR GCA 90 bp TTCACTCTTGTAAACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGCTTTCCTTCCTGTTTTaGTTAGGAAAGTCCTATTTT +
Preference number: 4 (lower is better)
Translates to: FTLVNSQHIPVGSINFRELSFLF*LGKSYF
Trigger: AAAATAGGACTTTCCTAAGCAAAACAGGAAGGAAAG...CTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTTTACAAGAGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR GCA 90 bp TGCTCTGAAGTACTGAGATTCAGTCCTAGCAAGAGATTACCAATAACTCAACAGTTAGAATGGCCAGTTTaGAATAAGCTGCTGACAACA +
Preference number: 4 (lower is better)
Translates to: CSEVLRFSPSKRLPITQQLEWPV*NKLLTT
Trigger: TGTTGTCAGCAGCTTATTGCAAACTGGCCATTCTAA...CTGTTGAGTTATTGGTAATCTCTTGCTAGGACTGAATCTCAGTACTTCAGAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp TGGAGGTTTTCACTAATAGGCCATGATCATGGGACCAATCACTGCATGAGTCATTTATTGCCACAGGTTTaGAAGATCTGCAAAATTTCA +
Preference number: 4 (lower is better)
Translates to: WRFSLIGHDHGTNHCMSHLLPQV*KICKIS
Trigger: TGAAATTTTGCAGATCTTGCAAACCTGTGGCAATAA...ATGACTCATGCAGTGATTGGTCCCATGATCATGGCCTATTAGTGAAAACCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGCTTAGGAATCAGTTGTaGCTTGGTACAGAAAGGATA +
Preference number: 4 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVLRNQL*LGTERI
Trigger: TATCCTTTCTGTACCAAGGCACAACTGATTCCTAAG...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGTCGCCTAATTTAAAATaGTGGTCAGTCAGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVSPNLK*WSVRSC
Trigger: ACAGCTTCTGACTGACCAGCATTTTAAATTAGGCGA...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp TGGAGGTTTTCACTAATAGGCCATGATCATGGGACCAATCACTGCATGAGTCATTGCTTGGTTTACTTTTaGTCAACCTTTCTGAATCTT +
Preference number: 4 (lower is better)
Translates to: WRFSLIGHDHGTNHCMSHCLVYF*STFLNL
Trigger: AAGATTCAGAAAGGTTGAGCAAAAGTAAACCAAGCA...ATGACTCATGCAGTGATTGGTCCCATGATCATGGCCTATTAGTGAAAACCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp CTTGTAAACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGTTCTGTTTGTCCCTTGTTAAATaGCTGAAGTCAACATATTCT +
Preference number: 4 (lower is better)
Translates to: LVNSQHIPVGSINFREFCLSLVK*LKSTYS
Trigger: AGAATATGTTGACTTCAGGCATTTAACAAGGGACAA...ACAGAACTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTTTACAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556663.5
CDS-3UTR CCA 90 bp TTGGAACTTCCTCAAATGATATTAAAAGCTCTACACAAAAGGTATGCAGAAGCAAATGGCATTGAGAGCTaGGTGTCGTTTGGCTACCAT +
Preference number: 4 (lower is better)
Translates to: LELPQMILKALHKRYAEANGIES*VSFGYH
Trigger: ATGGTAGCCAAACGACACCCAGCTCTCAATGCCATT...TGCTTCTGCATACCTTTTGTGTAGAGCTTTTAATATCATTTGAGGAAGTTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CCA 90 bp CCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTCAATATTTAAATTTAAGCAGATGCATGAGTaGGAGTCCCTCTACAATGTG +
Preference number: 4 (lower is better)
Translates to: PYLLRTQFHTGLNSIFKFKQMHE*ESLYNV
Trigger: CACATTGTAGAGGGACTCCCACTCATGCATCTGCTT...AAATTTAAATATTGAGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp TTGGAACTTCCTCAAATGATATTAAAAGCTCTACACAAAAGGTATGCAGAAGCATGGCCACCTGACCTTTaGAGGTTTTCACTAATAGGC +
Preference number: 4 (lower is better)
Translates to: LELPQMILKALHKRYAEAWPPDL*RFSLIG
Trigger: GCCTATTAGTGAAAACCTCCAAAGGTCAGGTGGCCA...TGCTTCTGCATACCTTTTGTGTAGAGCTTTTAATATCATTTGAGGAAGTTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp TTGGAACTTCCTCAAATGATATTAAAAGCTCTACACAAAAGGTATGCAGAAGCAAGCCCCCTCCAAATCTaGTACCAGGTAAACAAGCTA +
Preference number: 4 (lower is better)
Translates to: LELPQMILKALHKRYAEASPLQI*YQVNKL
Trigger: TAGCTTGTTTACCTGGTACCAGATTTGGAGGGGGCT...TGCTTCTGCATACCTTTTGTGTAGAGCTTTTAATATCATTTGAGGAAGTTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTAATAGTAGAAGTCACTaGTGGGTGAATCCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCNSRSH*WVNPAR
Trigger: TCTTGCTGGATTCACCCACCAGTGACTTCTACTATT...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp TGCTCTGAAGTACTGAGATTCAGTCCTAGCAAGAGATTACCAATAACTCAACAGGGGCAATGGTTCTGGTaGACCTTTGTTATTCTTATT +
Preference number: 4 (lower is better)
Translates to: CSEVLRFSPSKRLPITQQGQWFW*TFVILI
Trigger: AATAAGAATAACAAAGGTCCACCAGAACCATTGCCC...CTGTTGAGTTATTGGTAATCTCTTGCTAGGACTGAATCTCAGTACTTCAGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp CCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTCAATATTTAAATTTCCATGCTTTTACCCTTaGAGGGCTTCATCCACTCTT +
Preference number: 4 (lower is better)
Translates to: PYLLRTQFHTGLNSIFKFPCFYP*RASSTL
Trigger: AAGAGTGGATGAAGCCCTCCAAGGGTAAAAGCATGG...AAATTTAAATATTGAGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCAACTCTACTAAGTCGGTaGTTCAAGGGGAATAACCTC +
Preference number: 4 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSTLLSR*FKGNNL
Trigger: GAGGTTATTCCCCTTGAACCACCGACTTAGTAGAGT...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp TTGGAACTTCCTCAAATGATATTAAAAGCTCTACACAAAAGGTATGCAGAAGCAGCCTCACTTTATCTCTaGCTGGTGAGCTTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: LELPQMILKALHKRYAEAASLYL*LVSFCL
Trigger: CAAGCAAAAGCTCACCAGCCAGAGATAAAGTGAGGC...TGCTTCTGCATACCTTTTGTGTAGAGCTTTTAATATCATTTGAGGAAGTTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261530.12
CDS-3UTR CCA 90 bp CACTTCACCTGGACTTTCATTAACATGGACCTAATTTCCTGTCTGCTAAAACAAAACTGCCACTTCACCTaGACTTTCATTAACATGGAC +
Preference number: 4 (lower is better)
Translates to: HFTWTFINMDLISCLLKQNCHFT*TFINMD
Trigger: GTCCATGTTAATGAAAGTCCAGGTGAAGTGGCAGTT...TTGTTTTAGCAGACAGGAAATTAGGTCCATGTTAATGAAAGTCCAGGTGAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553588.1
3UTR CAA 72 bp AAACCCAGAAAGACCCAAGTACATATGGATCCTGGATaGAATACCGAACCAGAAAAACAACATTACTGGGAA +
Preference number: 4 (lower is better)
Translates to: KPRKTQVHMDPG*NTEPEKQHYWE
Trigger: TTCCCAGTAATGTTGTTTTTCTGGTTCGGTATTCAATCCAGGATCCATATGTACTTGGGTCTTTCTGGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261530.12
CDS-3UTR TCA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCACACAACATGATCTTCTaGGAGAAAGAATCCACTGCT +
Preference number: 4 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSHNMIF*EKESTA
Trigger: AGCAGTGGATTCTTTCTCTCAGAAGATCATGTTGTG...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR TCA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCAAACAACCAAAAAGCATaGCATCGCTATTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSNNQKA*HRYWSP
Trigger: TGGAGACCAATAGCGATGTCATGCTTTTTGGTTGTT...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTCATATTCTGAAATGCTaGATCCACGAGTCAGACAAT +
Preference number: 4 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCHILKC*IHESDN
Trigger: ATTGTCTGACTCGTGGATTCAGCATTTCAGAATATG...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp CCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTCAATATTTAAATTTAAATGTAGCAGTAGTTaGGTCTGTGGCTTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: PYLLRTQFHTGLNSIFKFKCSSS*VCGFLC
Trigger: GCAGAGAAAGCCACAGACGCAACTACTGCTACATTT...AAATTTAAATATTGAGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp TGCTCTGAAGTACTGAGATTCAGTCCTAGCAAGAGATTACCAATAACTCAACAGTCTACACAAAAGGTATaGAGAAGCAGTTACTGGTTT +
Preference number: 4 (lower is better)
Translates to: CSEVLRFSPSKRLPITQQSTQKV*RSSYWF
Trigger: AAACCAGTAACTGCTTCTGCATACCTTTTGTGTAGA...CTGTTGAGTTATTGGTAATCTCTTGCTAGGACTGAATCTCAGTACTTCAGAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACCTAACAATAAAGTCCTaGTTAGGACATAAAGGCTTA +
Preference number: 4 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYLTIKS*LGHKGL
Trigger: TAAGCCTTTATGTCCTAAGCAGGACTTTATTGTTAG...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCACCACCTTGCCAAGATTaGTTCTTTGCTGAATGTCTT +
Preference number: 4 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSPPCQD*FFAECL
Trigger: AAGACATTCAGCAAAGAAGCAATCTTGGCAAGGTGG...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACAGTAATAAATGTGAATaGTCCACTCTAATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYSNKCE*STLICA
Trigger: AGCACAGATTAGAGTGGAGCATTCACATTTATTACT...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACTTATTGCCACAGGTTTaGAAGATCTGCAAAATTTCA +
Preference number: 4 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYLLPQV*KICKIS
Trigger: TGAAATTTTGCAGATCTTGCAAACCTGTGGCAATAA...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp TTGGAACTTCCTCAAATGATATTAAAAGCTCTACACAAAAGGTATGCAGAAGCAAGGGACAGTGAATCCTaGGACACATTCTCCTTCATA +
Preference number: 4 (lower is better)
Translates to: LELPQMILKALHKRYAEARDSES*DTFSFI
Trigger: TATGAAGGAGAATGTGTCCCAGGATTCACTGTCCCT...TGCTTCTGCATACCTTTTGTGTAGAGCTTTTAATATCATTTGAGGAAGTTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CCA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGAACTGGTCTTCAAGATaGAAAAGAAGTGTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVNWSSR*KRSVVF
Trigger: AAACACCACACTTCTTTTCCATCTTGAAGACCAGTT...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp AAAAGCTCAGATGACTGGAGATTGCTGATAGTGGAATATAGGGTTTCAAACTCTAAAAGCTCAGATGACTaGAGATTGCTGATAGTGGAA +
Preference number: 4 (lower is better)
Translates to: KSSDDWRLLIVEYRVSNSKSSDD*RLLIVE
Trigger: TTCCACTATCAGCAATCTCCAGTCATCTGAGCTTTT...AGAGTTTGAAACCCTATATTCCACTATCAGCAATCTCCAGTCATCTGAGCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553588.1
3UTR CAA 72 bp GTTGTGCCTTGGTACAGAAAGGATAATACCTTCTTATaGCCACAGGTTTGCAAGATCTGCAAAATTTCATTG +
Preference number: 4 (lower is better)
Translates to: VVPWYRKDNTFL*PQVCKICKISL
Trigger: CAATGAAATTTTGCAGATCTTGCAAACCTGTGGCAATAAGAAGGTATTATCCTTTCTGTACCAAGGCACAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGAAGGAAGGAGTATCTaGACATGTTTAAATGCAAAG +
Preference number: 4 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCEGRSI*TCLNAK
Trigger: CTTTGCATTTAAACATGTTCAGATACTCCTTCCTTC...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTTACACATCTAATGAATaGAGGGGCATTTCTAAAAGC +
Preference number: 4 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCYTSNE*RGISKS
Trigger: GCTTTTAGAAATGCCCCTTCATTCATTAGATGTGTA...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTAACTTAACTGGTAGTTaGACAACTTTGACACTGAAG +
Preference number: 4 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCNLTGS*TTLTLK
Trigger: CTTCAGTGTCAAAGTTGTTCAACTACCAGTTAAGTT...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp CACTGTATTCATAGGGCTAGTGCTGATGCCCCAATAAAAAGTTCTTTGATAAAAAAGGAGTCAGATTCATaGCAAGAATGTTGCTTACTC +
Preference number: 4 (lower is better)
Translates to: HCIHRASADAPIKSSLIKKESDS*QECCLL
Trigger: GAGTAAGCAACATTCTTGGCATGAATCTGACTCCTT...TTTTATCAAAGAACTTTTTATTGGGGCATCAGCACTAGCCCTATGAATACAGTG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGTTATTCTTTTCTTTCTaGCGAGGGTCACTAATGATA +
Preference number: 4 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVLFFSF*RGSLMI
Trigger: TATCATTAGTGACCCTCGGCAGAAAGAAAAGAATAA...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261530.12
CDS-3UTR GCA 90 bp TGCTCTGAAGTACTGAGATTCAGTCCTAGCAAGAGATTACCAATAACTCAACAGTTCTCAGTCTTAAAGTaGCATGTAAACTTAGCTTCA +
Preference number: 4 (lower is better)
Translates to: CSEVLRFSPSKRLPITQQFSVLK*HVNLAS
Trigger: TGAAGCTAAGTTTACATGGCACTTTAAGACTGAGAA...CTGTTGAGTTATTGGTAATCTCTTGCTAGGACTGAATCTCAGTACTTCAGAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp TGCTCTGAAGTACTGAGATTCAGTCCTAGCAAGAGATTACCAATAACTCAACAGTGCTTGGTTTACTTTTaGTCAACCTTTCTGAATCTT +
Preference number: 4 (lower is better)
Translates to: CSEVLRFSPSKRLPITQQCLVYF*STFLNL
Trigger: AAGATTCAGAAAGGTTGAGCAAAAGTAAACCAAGCA...CTGTTGAGTTATTGGTAATCTCTTGCTAGGACTGAATCTCAGTACTTCAGAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTTTCATCTCCTTAAAATaGCATGACTTCGTAGAGATG +
Preference number: 4 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCFISLK*HDFVEM
Trigger: CATCTCTACGAAGTCATGCCATTTTAAGGAGATGAA...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCATCTGTGCTTTTAAGTTaGTGCATTAAGGTGGTATGG +
Preference number: 4 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSSVLLS*CIKVVW
Trigger: CCATACCACCTTAATGCACCAACTTAAAAGCACAGA...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTACTTTTCTCTTGCTCTaGTCACTCTCAAGAACAAAA +
Preference number: 4 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCTFLLL*SLSRTK
Trigger: TTTTGTTCTTGAGAGTGACCAGAGCAAGAGAAAAGT...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR TCA 90 bp TTGGAACTTCCTCAAATGATATTAAAAGCTCTACACAAAAGGTATGCAGAAGCATACAGCACCTTAAAATaGGGAGCACAATTTACAACC +
Preference number: 4 (lower is better)
Translates to: LELPQMILKALHKRYAEAYSTLK*GAQFTT
Trigger: GGTTGTAAATTGTGCTCCTCATTTTAAGGTGCTGTA...TGCTTCTGCATACCTTTTGTGTAGAGCTTTTAATATCATTTGAGGAAGTTCCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp TTGGAACTTCCTCAAATGATATTAAAAGCTCTACACAAAAGGTATGCAGAAGCATCATGCCAAGAATGTTaGTTACTCTTGACAATGGCA +
Preference number: 4 (lower is better)
Translates to: LELPQMILKALHKRYAEASCQEC*LLLTMA
Trigger: TGCCATTGTCAAGAGTAAGCAACATTCTTGGCATGA...TGCTTCTGCATACCTTTTGTGTAGAGCTTTTAATATCATTTGAGGAAGTTCCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCATCTACACAAAAGGTATaGAGAAGCAGTTACTGGTTT +
Preference number: 4 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSSTQKV*RSSYWF
Trigger: AAACCAGTAACTGCTTCTGCATACCTTTTGTGTAGA...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTCTAACAATAAAGTCCTaGTTAGGACATAAAGGCTTA +
Preference number: 4 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCLTIKS*LGHKGL
Trigger: TAAGCCTTTATGTCCTAAGCAGGACTTTATTGTTAG...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTTTACTTAACAAAGGATaGTACAAGCATCACAGACTA +
Preference number: 4 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCLLNKG*YKHHRL
Trigger: TAGTCTGTGATGCTTGTAGCATCCTTTGTTAAGTAA...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp CCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTCAATATTTAAATTTCAACCTTGCCTGATATaGAGACTACAACTCATTTTC +
Preference number: 4 (lower is better)
Translates to: PYLLRTQFHTGLNSIFKFQPCLI*RLQLIF
Trigger: GAAAATGAGTTGTAGTCTGCATATCAGGCAAGGTTG...AAATTTAAATATTGAGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp CATGTGGTAGCAAGTGACTTAAACTCTCTCAGCCTTCTTTTCTTCTTGTATAAAAAAAATTGTGGTGTATaGCATCAACCAGTTAACAGC +
Preference number: 4 (lower is better)
Translates to: HVVASDLNSLSLLFFLYKKNCGV*HQPVNS
Trigger: GCTGTTAACTGGTTGATGGCATACACCACAATTTTT...TTTATACAAGAAGAAAAGAAGGCTGAGAGAGTTTAAGTCACTTGCTACCACATG
37% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556372.2
CDS-3UTR CCA 90 bp CCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTCAATATTTAAATTTGAAAATCTGAAAGTCTaGGATTCTAGTCCTGGCTTA +
Preference number: 4 (lower is better)
Translates to: PYLLRTQFHTGLNSIFKFENLKV*DSSPGL
Trigger: TAAGCCAGGACTAGAATCCCAGACTTTCAGATTTTC...AAATTTAAATATTGAGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCAAAATCTCTTTACTTATaGAGGGAATATGAGAGCACC +
Preference number: 4 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSKSLYL*REYEST
Trigger: GGTGCTCTCATATTCCCTCCATAAGTAAAGAGATTT...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp TTGGAACTTCCTCAAATGATATTAAAAGCTCTACACAAAAGGTATGCAGAAGCATCTGTGCTTTTAAGTTaGTGCATTAAGGTGGTATGG +
Preference number: 4 (lower is better)
Translates to: LELPQMILKALHKRYAEASVLLS*CIKVVW
Trigger: CCATACCACCTTAATGCACCAACTTAAAAGCACAGA...TGCTTCTGCATACCTTTTGTGTAGAGCTTTTAATATCATTTGAGGAAGTTCCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp TTGGAACTTCCTCAAATGATATTAAAAGCTCTACACAAAAGGTATGCAGAAGCAGATGTTGCTTCCAAATaGCAGACCACCAAATACATA +
Preference number: 4 (lower is better)
Translates to: LELPQMILKALHKRYAEADVASK*QTTKYI
Trigger: TATGTATTTGGTGGTCTGCCATTTGGAAGCAACATC...TGCTTCTGCATACCTTTTGTGTAGAGCTTTTAATATCATTTGAGGAAGTTCCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp AAAAGCTCAGATGACTGGAGATTGCTGATAGTGGAATATAGGGTTTCAAACTCTAGAGAAGCACTATTTTaGCTTCTACCAATTAGTGTT +
Preference number: 4 (lower is better)
Translates to: KSSDDWRLLIVEYRVSNSREALF*LLPISV
Trigger: AACACTAATTGGTAGAAGCCAAAATAGTGCTTCTCT...AGAGTTTGAAACCCTATATTCCACTATCAGCAATCTCCAGTCATCTGAGCTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553588.1
CDS-3UTR TCA 90 bp TTGGAACTTCCTCAAATGATATTAAAAGCTCTACACAAAAGGTATGCAGAAGCAAGCTGTAGTAAATGTTaGGACAGCAATAACAAGGTA +
Preference number: 4 (lower is better)
Translates to: LELPQMILKALHKRYAEASCSKC*DSNNKV
Trigger: TACCTTGTTATTGCTGTCTCAACATTTACTACAGCT...TGCTTCTGCATACCTTTTGTGTAGAGCTTTTAATATCATTTGAGGAAGTTCCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp CACTGTATTCATAGGGCTAGTGCTGATGCCCCAATAAAAAGTTCTTTGATAAAACTTTCCTTCCTGTTTTaGTTAGGAAAGTCCTATTTT +
Preference number: 4 (lower is better)
Translates to: HCIHRASADAPIKSSLIKLSFLF*LGKSYF
Trigger: AAAATAGGACTTTCCTAAGCAAAACAGGAAGGAAAG...TTTTATCAAAGAACTTTTTATTGGGGCATCAGCACTAGCCCTATGAATACAGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCACTAACAATAAAGTCCTaGTTAGGACATAAAGGCTTA +
Preference number: 4 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSLTIKS*LGHKGL
Trigger: TAAGCCTTTATGTCCTAAGCAGGACTTTATTGTTAG...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR GCA 90 bp CACTGTATTCATAGGGCTAGTGCTGATGCCCCAATAAAAAGTTCTTTGATAAAAAGTAATAAATGTGAATaGTCCACTCTAATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: HCIHRASADAPIKSSLIKSNKCE*STLICA
Trigger: AGCACAGATTAGAGTGGAGCATTCACATTTATTACT...TTTTATCAAAGAACTTTTTATTGGGGCATCAGCACTAGCCCTATGAATACAGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CCA 90 bp TTGGAACTTCCTCAAATGATATTAAAAGCTCTACACAAAAGGTATGCAGAAGCATGTAAGCTTTACATGTaGGCCATACTAAAACACTTG +
Preference number: 4 (lower is better)
Translates to: LELPQMILKALHKRYAEACKLYM*AILKHL
Trigger: CAAGTGTTTTAGTATGGCCCACATGTAAAGCTTACA...TGCTTCTGCATACCTTTTGTGTAGAGCTTTTAATATCATTTGAGGAAGTTCCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CAA 72 bp CACCTTAAAATGAGGAGCACAATTTACAACCCTGTGTaGGAAAGTATTTGTGTGCTTAATATTCTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: HLKMRSTIYNPV*ESICVLNILFS
Trigger: AGAGAACAGAATATTAAGCACACAAATACTTTCCAACACAGGGTTGTAAATTGTGCTCCTCATTTTAAGGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
3UTR CAA 72 bp CATATGACTACTAATCAGATCCACCTACCCCATATTTaGAATCAGAAACTAGTGATTCAAAGACATCAGGAA +
Preference number: 4 (lower is better)
Translates to: HMTTNQIHLPHI*NQKLVIQRHQE
Trigger: TTCCTGATGTCTTTGAATCACTAGTTTCTGATTCAAAATATGGGGTAGGTGGATCTGATTAGTAGTCATATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR GCA 90 bp CCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTCAATATTTAAATTTCTTTCCTTCCTGTTTTaGTTAGGAAAGTCCTATTTT +
Preference number: 4 (lower is better)
Translates to: PYLLRTQFHTGLNSIFKFLSFLF*LGKSYF
Trigger: AAAATAGGACTTTCCTAAGCAAAACAGGAAGGAAAG...AAATTTAAATATTGAGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS GCA 90 bp TCAGAACGACGCTTCCGACCTCGGCGTTTCCGAAGCTGCCGCCTCTaGTGTCGGGGGCTCAGCGCCATCTCCTCCCACAGTTCACCAAGC +
Preference number: 5 (lower is better)
Translates to: SERRFRPRRFRSCRL*CRGLSAISSHSSPS
Trigger: GCTTGGTGAACTGTGGGAGGAGATGGCGCTGAGCCCCCGACAGCAGAGGCGGCAGCTTCGGAAACGCCGAGGTCGGAAGCGTCGTTCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554125.5
ENST00000554375.5
ENST00000556109.1
ENST00000556663.5
ENST00000557263.5
ENST00000557542.5
ENST00000621494.1
CDS GCA 90 bp AGTAGTGACAAAAGAACCCTAGAACTCCCCATCTCCAGTCGCGGATaGACACTCTCGAGAGGACCCGGCGGCCAGGCACGCACCCGGGCA +
Preference number: 5 (lower is better)
Translates to: SSDKRTLELPISSRG*TLSRGPGGQARTRA
Trigger: TGCCCGGGTGCGTGCCTGGCCGCCGGGTCCTCTCGAGAGTGTGCATCCGCGACTGGAGATGGGGAGTTCTAGGGTTCTTTTGTCACTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557207.1
CDS TCA 90 bp ACTCAGAGGCCTCGCTGTAGCAGCAGGTATGCTCTGCCAGGTGAGTaGAGTCAGAACGACGCTTCCGACCTCGGCGTTTCCGAAGCTGCC +
Preference number: 5 (lower is better)
Translates to: TQRPRCSSRYALPGE*SQNDASDLGVSEAA
Trigger: GGCAGCTTCGGAAACGCCGAGGTCGGAAGCGTCGTTCTGACTTCACTCACCTGGCAGAGCATACCTGCTGCTACAGCGAGGCCTCTGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554125.5
ENST00000554375.5
ENST00000556109.1
ENST00000556663.5
ENST00000557263.5
ENST00000557542.5
ENST00000621494.1
CDS CCA 90 bp CGCACAGCAGGAGGTGAGCTGTCAGCAAGCAGCTGCTCCCCATCGTaGGCATTACCGCCTGAGCTCTACCTCCTGTCAGATCAACAGCCA +
Preference number: 5 (lower is better)
Translates to: RTAGGELSASSCSPS*ALPPELYLLSDQQP
Trigger: TGGCTGTTGATCTGACAGGAGGTAGAGCTCAGGCGGTAATGCCCACGATGGGGAGCAGCTGCTTGCTGACAGCTCACCTCCTGCTGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554125.5
CDS-3UTR CAA 90 bp GATGCTGTGGCCACTGGTTTCCGCTTCCTCTTGATGTCACGTGAACATGGTGGTAACGGCCGCCGCTTTTaGGGCCGACTCTCACCGCCG +
Preference number: 5 (lower is better)
Translates to: DAVATGFRFLLMSREHGGNGRRF*GRLSPP
Trigger: CGGCGGTGAGAGTCGGCCCAAAAAGCGGCGGCCGTT...ACCACCATGTTCACGTGACATCAAGAGGAAGCGGAAACCAGTGGCCACAGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR CAA 90 bp ACACTTCGTATGGGAAACAGGGGCAATCGCACTTTGGGGGAAGGAGGTGCTGCCCCCCTGGAGGGCTTGTaGAAGACTGCTGGGCCTTGC +
Preference number: 5 (lower is better)
Translates to: TLRMGNRGNRTLGEGGAAPLEGL*KTAGPC
Trigger: GCAAGGCCCAGCAGTCTTCAACAAGCCCTCCAGGGG...GGCAGCACCTCCTTCCCCCAAAGTGCGATTGCCCCTGTTTCCCATACGAAGTGT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp CCAGAGCTGTCTTGTCAGGGCACTCTCGCTGGAATACAGGCCTCCGAGTGTTGTGTGGCCAGAGCTGTCTaGTCAGGGCACTCTCGCTGG +
Preference number: 5 (lower is better)
Translates to: PELSCQGTLAGIQASECCVARAV*SGHSRW
Trigger: CCAGCGAGAGTGCCCTGACAAGACAGCTCTGGCCAC...ACAACACTCGGAGGCCTGTATTCCAGCGAGAGTGCCCTGACAAGACAGCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556372.2
CDS TCA 90 bp CACCGGAGCCACTTCTCGACAGTCCTTAGTGGCCTCATCCAGACTTaGCTCAGAGGCCTCGCTGTAGCAGCAGGTATGCTCTGCCAGGTG +
Preference number: 5 (lower is better)
Translates to: HRSHFSTVLSGLIQT*LRGLAVAAGMLCQV
Trigger: CACCTGGCAGAGCATACCTGCTGCTACAGCGAGGCCTCTGAGTCAAGTCTGGATGAGGCCACTAAGGACTGTCGAGAAGTGGCTCCGGTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554125.5
ENST00000554375.5
ENST00000556109.1
ENST00000556663.5
ENST00000557263.5
ENST00000557542.5
ENST00000621494.1
CDS GCA 90 bp CGGGGGCTCAGCGCCATCTCCTCCCACAGTTCACCAAGCTTATTCTaGTCAGATGTCTGCTCCAAGGCTGAGGCTAAGTCGTGTACCAGC +
Preference number: 5 (lower is better)
Translates to: RGLSAISSHSSPSLF*SDVCSKAEAKSCTS
Trigger: GCTGGTACACGACTTAGCCTCAGCCTTGGAGCAGACATCTGAGCAGAATAAGCTTGGTGAACTGTGGGAGGAGATGGCGCTGAGCCCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554125.5
ENST00000554375.5
ENST00000556109.1
ENST00000556663.5
ENST00000557263.5
ENST00000557542.5
ENST00000621494.1
CDS-3UTR CAA 90 bp GCAGAAAGCCACAGATTAAAGACAGCATTAGGTGGAGGAGCCCCTTTTGGGCACGTGGAGGAGCCCCTTTaGGGCACAGGCCCCCTTACC +
Preference number: 5 (lower is better)
Translates to: AESHRLKTALGGGAPFGHVEEPL*GTGPLT
Trigger: GGTAAGGGGGCCTGTGCCCAAAAGGGGCTCCTCCAC...GTGCCCAAAAGGGGCTCCTCCACCTAATGCTGTCTTTAATCTGTGGCTTTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp GCAGAAAGCCACAGATTAAAGACAGCATTAGGTGGAGGAGCCCCTTTTGGGCACAGGGGCAATCGCACTTaGGGGGAAGGAGGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: AESHRLKTALGGGAPFGHRGNRT*GEGGAA
Trigger: GGCAGCACCTCCTTCCCCCAAAGTGCGATTGCCCCT...GTGCCCAAAAGGGGCTCCTCCACCTAATGCTGTCTTTAATCTGTGGCTTTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp GCAGAAAGCCACAGATTAAAGACAGCATTAGGTGGAGGAGCCCCTTTTGGGCACCCCCTGGAGGGCTTGTaGAAGACTGCTGGGCCTTGC +
Preference number: 5 (lower is better)
Translates to: AESHRLKTALGGGAPFGHPLEGL*KTAGPC
Trigger: GCAAGGCCCAGCAGTCTTCAACAAGCCCTCCAGGGG...GTGCCCAAAAGGGGCTCCTCCACCTAATGCTGTCTTTAATCTGTGGCTTTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp TGCGTCTGTGGCTTTCTCTGCTGCAGAGGTCCTCACCAACCACTCAGAGCTGGGAGGGGAGACAGGGGATaGAACTTCTGCTCCATACGT +
Preference number: 5 (lower is better)
Translates to: CVCGFLCCRGPHQPLRAGRGDRG*NFCSIR
Trigger: ACGTATGGAGCAGAAGTTCAATCCCCTGTCTCCCCT...CCCAGCTCTGAGTGGTTGGTGAGGACCTCTGCAGCAGAGAAAGCCACAGACGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR CAA 90 bp GCCAGGGTTAAAAACCACTGCCTCGGTAGACTGCAGAATGGACAGAGTGCAGATCCTACCTCACTGGGCTaGGAGGAGGAACAAGGGAGG +
Preference number: 5 (lower is better)
Translates to: ARVKNHCLGRLQNGQSADPTSLG*EEEQGR
Trigger: CCTCCCTTGTTCCTCCTCCAAGCCCAGTGAGGTAGG...ATCTGCACTCTGTCCATTCTGCAGTCTACCGAGGCAGTGGTTTTTAACCCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp TTCACTCTTGTAAACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGAACGGCCGCCGCTTTTaGGGCCGACTCTCACCGCCG +
Preference number: 5 (lower is better)
Translates to: FTLVNSQHIPVGSINFRENGRRF*GRLSPP
Trigger: CGGCGGTGAGAGTCGGCCCAAAAAGCGGCGGCCGTT...CTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTTTACAAGAGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557263.5
CDS-3UTR CAA 90 bp GCCAGGGTTAAAAACCACTGCCTCGGTAGACTGCAGAATGGACAGAGTGCAGATTGGCCTCATCCAGACTaGACTCAGAGGCCTCGCTGT +
Preference number: 5 (lower is better)
Translates to: ARVKNHCLGRLQNGQSADWPHPD*TQRPRC
Trigger: ACAGCGAGGCCTCTGAGTCAAGTCTGGATGAGGCCA...ATCTGCACTCTGTCCATTCTGCAGTCTACCGAGGCAGTGGTTTTTAACCCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp TTCTCTGCTGCAGAGGTCCTCACCAACCACTCAGAGCTGGGTGATTTGGGGGCTAGAGCTGGGTGTCGTTaGGCTACCATTGTGTCATCA +
Preference number: 5 (lower is better)
Translates to: FSAAEVLTNHSELGDLGARAGCR*ATIVSS
Trigger: TGATGACACAATGGTAGCCAAACGACACCCAGCTCT...AGCCCCCAAATCACCCAGCTCTGAGTGGTTGGTGAGGACCTCTGCAGCAGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR CAA 90 bp ACACTTCGTATGGGAAACAGGGGCAATCGCACTTTGGGGGAAGGAGGTGCTGCCGGTTTCCGCTTCCTCTaGATGTCACGTGAACATGGT +
Preference number: 5 (lower is better)
Translates to: TLRMGNRGNRTLGEGGAAGFRFL*MSREHG
Trigger: ACCATGTTCACGTGACATCAAGAGGAAGCGGAAACC...GGCAGCACCTCCTTCCCCCAAAGTGCGATTGCCCCTGTTTCCCATACGAAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp GATGCTGTGGCCACTGGTTTCCGCTTCCTCTTGATGTCACGTGAACATGGTGGTTCAGAGCTGGGTGATTaGGGGGCTTGTGATGCTGGT +
Preference number: 5 (lower is better)
Translates to: DAVATGFRFLLMSREHGGSELGD*GACDAG
Trigger: ACCAGCATCACAAGCCCCCAAATCACCCAGCTCTGA...ACCACCATGTTCACGTGACATCAAGAGGAAGCGGAAACCAGTGGCCACAGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS GCA 90 bp GCCATCTCCTCCCACAGTTCACCAAGCTTATTCTGCTCAGATGTCTaGTCCAAGGCTGAGGCTAAGTCGTGTACCAGCTCATCCATGAGG +
Preference number: 5 (lower is better)
Translates to: AISSHSSPSLFCSDV*SKAEAKSCTSSSMR
Trigger: CCTCATGGATGAGCTGGTACACGACTTAGCCTCAGCCTTGGAGCAGACATCTGAGCAGAATAAGCTTGGTGAACTGTGGGAGGAGATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554125.5
ENST00000554375.5
ENST00000556109.1
ENST00000556663.5
ENST00000557263.5
ENST00000557542.5
ENST00000621494.1
CDS-3UTR CAA 90 bp CTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGAACGGCCGCCGCTTTTaGGGCCGACTCTCACCGCCG +
Preference number: 5 (lower is better)
Translates to: LNHLLHYTNLCVCVCVCVNGRRF*GRLSPP
Trigger: CGGCGGTGAGAGTCGGCCCAAAAAGCGGCGGCCGTT...CACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000312858.9
CDS-3UTR CAA 90 bp GCCAGGGTTAAAAACCACTGCCTCGGTAGACTGCAGAATGGACAGAGTGCAGATTCAGAGCTGGGTGATTaGGGGGCTTGTGATGCTGGT +
Preference number: 5 (lower is better)
Translates to: ARVKNHCLGRLQNGQSADSELGD*GACDAG
Trigger: ACCAGCATCACAAGCCCCCAAATCACCCAGCTCTGA...ATCTGCACTCTGTCCATTCTGCAGTCTACCGAGGCAGTGGTTTTTAACCCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp CACTGCTGCGTGAGAACCAGAGGCGACTCACAGGTCTGCTGGGCTGGTTTCAGCGGCCCCAAAACTTGGTaGATTTATCTTATTGGCACT +
Preference number: 5 (lower is better)
Translates to: HCCVRTRGDSQVCWAGFSGPKTW*IYLIGT
Trigger: AGTGCCAATAAGATAAATCAACCAAGTTTTGGGGCC...GCTGAAACCAGCCCAGCAGACCTGTGAGTCGCCTCTGGTTCTCACGCAGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp ACACTTCGTATGGGAAACAGGGGCAATCGCACTTTGGGGGAAGGAGGTGCTGCCCTATGGTTCTCAAACTaGAGCATGCACCAAAGACCC +
Preference number: 5 (lower is better)
Translates to: TLRMGNRGNRTLGEGGAALWFSN*SMHQRP
Trigger: GGGTCTTTGGTGCATGCTCAAGTTTGAGAACCATAG...GGCAGCACCTCCTTCCCCCAAAGTGCGATTGCCCCTGTTTCCCATACGAAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS TCA 90 bp TTCTGCAGGTCAGAAGTTTACACACAGGTTGGCTGGTTTCTCTGTTaGAGGGTTTCACCAGCTGCTATCCAGGTGACAGCTCGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: FCRSEVYTQVGWFLC*RVSPAAIQVTARAA
Trigger: TGCAGCCCGAGCTGTCACCTGGATAGCAGCTGGTGAAACCCTTCAACAGAGAAACCAGCCAACCTGTGTGTAAACTTCTGACCTGCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556675.2
CDS-3UTR CAA 90 bp AAGCAGATGCATGAGTGGGAGTCCCTCTACAATGTGACCAGAGCAGGGAGCACTCTGTTCGTCATCACCTaGTCGCCCTTCATCATTGGT +
Preference number: 5 (lower is better)
Translates to: KQMHEWESLYNVTRAGSTLFVIT*SPFIIG
Trigger: ACCAATGATGAAGGGCGACAAGGTGATGACGAACAG...AGTGCTCCCTGCTCTGGTCACATTGTAGAGGGACTCCCACTCATGCATCTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS CCA 90 bp GTTTTGCTTAGGAAAGTCCTATTTTCTGCTGATTCACACAATCCGTaGCCTGATGAGGTCCAGGGAGTATTCTCCTTCCGCCTGCGCCTG +
Preference number: 5 (lower is better)
Translates to: VLLRKVLFSADSHNP*PDEVQGVFSFRLRL
Trigger: CAGGCGCAGGCGGAAGGAGAATACTCCCTGGACCTCATCAGGCCACGGATTGTGTGAATCAGCAGAAAATAGGACTTTCCTAAGCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556109.1
CDS-3UTR CAA 90 bp GCCAGGGTTAAAAACCACTGCCTCGGTAGACTGCAGAATGGACAGAGTGCAGATAGAGCTGGGTGTCGTTaGGCTACCATTGTGTCATCA +
Preference number: 5 (lower is better)
Translates to: ARVKNHCLGRLQNGQSADRAGCR*ATIVSS
Trigger: TGATGACACAATGGTAGCCAAACGACACCCAGCTCT...ATCTGCACTCTGTCCATTCTGCAGTCTACCGAGGCAGTGGTTTTTAACCCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp GTGCTGGTGAACACCTTCGGTGAGAAGCATCGGCAAGAACATCCAGGGAGTAAACTGTTCGTCATCACCTaGTCGCCCTTCATCATTGGT +
Preference number: 5 (lower is better)
Translates to: VLVNTFGEKHRQEHPGSKLFVIT*SPFIIG
Trigger: ACCAATGATGAAGGGCGACAAGGTGATGACGAACAG...TTTACTCCCTGGATGTTCTTGCCGATGCTTCTCACCGAAGGTGTTCACCAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR CAA 90 bp GATGCTGTGGCCACTGGTTTCCGCTTCCTCTTGATGTCACGTGAACATGGTGGTCACAAAGTCCAACATTaGCTTCAGCAACACCCAGTC +
Preference number: 5 (lower is better)
Translates to: DAVATGFRFLLMSREHGGHKVQH*LQQHPV
Trigger: GACTGGGTGTTGCTGAAGCAAATGTTGGACTTTGTG...ACCACCATGTTCACGTGACATCAAGAGGAAGCGGAAACCAGTGGCCACAGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR CAA 90 bp ACACTTCGTATGGGAAACAGGGGCAATCGCACTTTGGGGGAAGGAGGTGCTGCCGCATCTCTCTACCACTaGCATTTAGTTCTGAGTGAT +
Preference number: 5 (lower is better)
Translates to: TLRMGNRGNRTLGEGGAAASLYH*HLVLSD
Trigger: ATCACTCAGAACTAAATGCAAGTGGTAGAGAGATGC...GGCAGCACCTCCTTCCCCCAAAGTGCGATTGCCCCTGTTTCCCATACGAAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp GCAGAAAGCCACAGATTAAAGACAGCATTAGGTGGAGGAGCCCCTTTTGGGCACAGCATGACATCGCTATaGGTCTCCAACCCCTGCAAA +
Preference number: 5 (lower is better)
Translates to: AESHRLKTALGGGAPFGHSMTSL*VSNPCK
Trigger: TTTGCAGGGGTTGGAGACCAATAGCGATGTCATGCT...GTGCCCAAAAGGGGCTCCTCCACCTAATGCTGTCTTTAATCTGTGGCTTTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp AAGCAGATGCATGAGTGGGAGTCCCTCTACAATGTGACCAGAGCAGGGAGCACTCTGAAAAGACAGAACTaGGATTTCTGGGCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: KQMHEWESLYNVTRAGSTLKRQN*DFWALA
Trigger: TGCCAGAGCCCAGAAATCCAAGTTCTGTCTTTTCAG...AGTGCTCCCTGCTCTGGTCACATTGTAGAGGGACTCCCACTCATGCATCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp ATGACCAGCTGGGAAAAGGCTGGAGAACTCACGAAACTGACGGGAAGGTGGAGGGTCATCCATTTCATCTaGAGAACTCCTACTTGCTCC +
Preference number: 5 (lower is better)
Translates to: MTSWEKAGELTKLTGRWRVIHFI*RTPTCS
Trigger: GGAGCAAGTAGGAGTTCTCAAGATGAAATGGATGAC...CCTCCACCTTCCCGTCAGTTTCGTGAGTTCTCCAGCCTTTTCCCAGCTGGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556372.2
CDS GCA 90 bp TGTCACTCGCTTCACCTTCCGCCTGCGCCTGAGTGGTCGACAAGGTaGATTTTCAGTAAAGGAGTCAGATTCATGCCAAGAATGTTGCTT +
Preference number: 5 (lower is better)
Translates to: CHSLHLPPAPEWSTR*IFSKGVRFMPRMLL
Trigger: AAGCAACATTCTTGGCATGAATCTGACTCCTTTACTGAAAATGCACCTTGTCGACCACTCAGGCGCAGGCGGAAGGTGAAGCGAGTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554125.5
ENST00000554375.5
ENST00000556663.5
ENST00000557263.5
ENST00000621494.1
CDS GCA 90 bp CCAGGGAGTATTCTCCTTCCGCCTGCGCCTGAGTGGTCGACAAGGTaGATTTTCAGTAAAGGAGTCAGATTCATGCCAAGAATGTTGCTT +
Preference number: 5 (lower is better)
Translates to: PGSILLPPAPEWSTR*IFSKGVRFMPRMLL
Trigger: AAGCAACATTCTTGGCATGAATCTGACTCCTTTACTGAAAATGCACCTTGTCGACCACTCAGGCGCAGGCGGAAGGAGAATACTCCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556109.1
CDS-3UTR CAA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCAAACGGCCGCCGCTTTTaGGGCCGACTCTCACCGCCG +
Preference number: 5 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSNGRRF*GRLSPP
Trigger: CGGCGGTGAGAGTCGGCCCAAAAAGCGGCGGCCGTT...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000312858.9
CDS-3UTR CAA 90 bp GGTTTCCGCTTCCTCTTGATGTCACGTGAACATGGTGGTCCCCAGTGTACATTTCTCTTGACAATGGCATaGAGAGCTGGGTGTCGTTTG +
Preference number: 5 (lower is better)
Translates to: GFRFLLMSREHGGPQCTFLLTMA*RAGCRL
Trigger: CAAACGACACCCAGCTCTCAATGCCATTGTCAAGAG...AAATGTACACTGGGGACCACCATGTTCACGTGACATCAAGAGGAAGCGGAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR CAA 90 bp TCTGTGGCTTTCTCTGCTGCAGAGGTCCTCACCAACCACTCAGAGCTGGGTGATGAATGTTGCTTACTCTaGACAATGGCATTGAGAGCT +
Preference number: 5 (lower is better)
Translates to: SVAFSAAEVLTNHSELGDECCLL*TMALRA
Trigger: AGCTCTCAATGCCATTGTCAAGAGTAAGCAACATTC...ATCACCCAGCTCTGAGTGGTTGGTGAGGACCTCTGCAGCAGAGAAAGCCACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR CAA 90 bp GGTTTCCGCTTCCTCTTGATGTCACGTGAACATGGTGGTCCCCAGTGTACATTTTGCTTCTTAGCAGACTaGAACCTGCAGCCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: GFRFLLMSREHGGPQCTFCFLAD*NLQPLS
Trigger: TGAGAGAGGCTGCAGGTTCAAGTCTGCTAAGAAGCA...AAATGTACACTGGGGACCACCATGTTCACGTGACATCAAGAGGAAGCGGAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR CAA 90 bp ACACTTCGTATGGGAAACAGGGGCAATCGCACTTTGGGGGAAGGAGGTGCTGCCTTGAGGCCCCAAAACTaGGTTGATTTATCTTATTGG +
Preference number: 5 (lower is better)
Translates to: TLRMGNRGNRTLGEGGAALRPQN*VDLSYW
Trigger: CCAATAAGATAAATCAACCAAGTTTTGGGGCCTCAA...GGCAGCACCTCCTTCCCCCAAAGTGCGATTGCCCCTGTTTCCCATACGAAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp GCCAGGGTTAAAAACCACTGCCTCGGTAGACTGCAGAATGGACAGAGTGCAGATTGGGGTGGCATCAGTTaGCATGGTCGTGAGATTTTT +
Preference number: 5 (lower is better)
Translates to: ARVKNHCLGRLQNGQSADWGGIS*HGREIF
Trigger: AAAAATCTCACGACCATGCAAACTGATGCCACCCCA...ATCTGCACTCTGTCCATTCTGCAGTCTACCGAGGCAGTGGTTTTTAACCCTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp AAGCAGATGCATGAGTGGGAGTCCCTCTACAATGTGACCAGAGCAGGGAGCACTGGTTCTGGTGGACCTTaGTTATTCTTATTGGCTGTC +
Preference number: 5 (lower is better)
Translates to: KQMHEWESLYNVTRAGSTGSGGP*LFLLAV
Trigger: GACAGCCAATAAGAATAACAAAGGTCCACCAGAACC...AGTGCTCCCTGCTCTGGTCACATTGTAGAGGGACTCCCACTCATGCATCTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp GGCTCAAAGGCAAGCCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTAAAGTGCCCTCCTCCTaGCTGCCAAAATACCCTGTC +
Preference number: 5 (lower is better)
Translates to: GSKASLISCEHNSIQVSTKVPSS*LPKYPV
Trigger: GACAGGGTATTTTGGCAGCAAGGAGGAGGGCACTTT...AGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGGCTTGCCTTTGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp TGGAGCATTGCCAACAGCCCAGAGGGTTTCTTTGTGCCCTCTCTTGGTCACTGCTCAGATGACTGGAGATaGCTGATAGTGGAATATAGG +
Preference number: 5 (lower is better)
Translates to: WSIANSPEGFFVPSLGHCSDDWR*LIVEYR
Trigger: CCTATATTCCACTATCAGCAATCTCCAGTCATCTGA...GCAGTGACCAAGAGAGGGCACAAAGAAACCCTCTGGGCTGTTGGCAATGCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553588.1
CDS-3UTR CAA 90 bp CCAAGTTCATCATATGGAGCATTGCCAACAGCCCAGAGGGTTTCTTTGTGCCCTTCATCATATGGAGCATaGCCAACAGCCCAGAGGGTT +
Preference number: 5 (lower is better)
Translates to: PSSSYGALPTAQRVSLCPSSYGA*PTAQRV
Trigger: AACCCTCTGGGCTGTTGGCAATGCTCCATATGATGA...AGGGCACAAAGAAACCCTCTGGGCTGTTGGCAATGCTCCATATGATGAACTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553588.1
CDS CCA 90 bp GTTTTGCTTAGGAAAGTCCTATTTTCTGCTGATTCACACAATCCGTaGCCTGATGAGGTCCAGGGAGTATTCTCCTTCCAGCGGGACAGA +
Preference number: 5 (lower is better)
Translates to: VLLRKVLFSADSHNP*PDEVQGVFSFQRDR
Trigger: TCTGTCCCGCTGGAAGGAGAATACTCCCTGGACCTCATCAGGCCACGGATTGTGTGAATCAGCAGAAAATAGGACTTTCCTAAGCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554125.5
ENST00000554375.5
ENST00000556663.5
ENST00000557263.5
ENST00000621494.1
CDS-3UTR CAA 90 bp AACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGTTCTGTAGCACCAGAGCTGGGTGTCGTTaGGCTACCATTGTGTCATCA +
Preference number: 5 (lower is better)
Translates to: NSQHIPVGSINFREFCSTRAGCR*ATIVSS
Trigger: TGATGACACAATGGTAGCCAAACGACACCCAGCTCT...GGTGCTACAGAACTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR CAA 90 bp AACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGTTCTGTAGCACCTGCTTCTTAGCAGACTaGAACCTGCAGCCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: NSQHIPVGSINFREFCSTCFLAD*NLQPLS
Trigger: TGAGAGAGGCTGCAGGTTCAAGTCTGCTAAGAAGCA...GGTGCTACAGAACTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR CAA 90 bp GGCTCAAAGGCAAGCCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTTGTCGCCCTTCATCATaGGTAAAGAGCCCAGTGTCA +
Preference number: 5 (lower is better)
Translates to: GSKASLISCEHNSIQVSTCRPSS*VKSPVS
Trigger: TGACACTGGGCTCTTTACCAATGATGAAGGGCGACA...AGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGGCTTGCCTTTGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CAA 90 bp GGCTCAAAGGCAAGCCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTTCCCACTTCTCCACCTaGCCAAGATTGCTTCTTTGC +
Preference number: 5 (lower is better)
Translates to: GSKASLISCEHNSIQVSTSHFST*PRLLLC
Trigger: GCAAAGAAGCAATCTTGGCAAGGTGGAGAAGTGGGA...AGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGGCTTGCCTTTGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGGAAAAGGGGTTCGTCTaGGGCAGGACAGGCACTGGC +
Preference number: 5 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVEKGFV*GRTGTG
Trigger: GCCAGTGCCTGTCCTGCCCAAGACGAACCCCTTTTC...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp GAAAGTGGAACCCCAAGTTTCACTGTATTCATAGGGCTAGTGCTGATGCCCCAAGAGGCAGCAGAGGTATaGATTGGGAACAGACACTCT +
Preference number: 5 (lower is better)
Translates to: ESGTPSFTVFIGLVLMPQEAAEV*IGNRHS
Trigger: AGAGTGTCTGTTCCCAATCAATACCTCTGCTGCCTC...TTGGGGCATCAGCACTAGCCCTATGAATACAGTGAAACTTGGGGTTCCACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp GGCTCAAAGGCAAGCCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTTCAGAGTCACTAAAATaGGTCACCGGAGCCACTTCT +
Preference number: 5 (lower is better)
Translates to: GSKASLISCEHNSIQVSTSESLK*VTGATS
Trigger: AGAAGTGGCTCCGGTGACCAATTTTAGTGACTCTGA...AGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGGCTTGCCTTTGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CAA 90 bp AACATCCAGGGAGTAAAGGGGAGACAGGGGATTGAACTTCTGCTCCATACGTTTTCAGAGTCACTAAAATaGGTCACCGGAGCCACTTCT +
Preference number: 5 (lower is better)
Translates to: NIQGVKGRQGIELLLHTFSESLK*VTGATS
Trigger: AGAAGTGGCTCCGGTGACCAATTTTAGTGACTCTGA...AAACGTATGGAGCAGAAGTTCAATCCCCTGTCTCCCCTTTACTCCCTGGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR CAA 90 bp AACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGTTCTGTAGCACCTCAGAGTCACTAAAATaGGTCACCGGAGCCACTTCT +
Preference number: 5 (lower is better)
Translates to: NSQHIPVGSINFREFCSTSESLK*VTGATS
Trigger: AGAAGTGGCTCCGGTGACCAATTTTAGTGACTCTGA...GGTGCTACAGAACTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR CAA 90 bp GTCAGCTCCTGGAGGGTGAAGTCCTGCTCTCTAGCTGTATCCAGGGCTCTTTTCTCTTTCCTTCCTGTTTaGCTTAGGAAAGTCCTATTT +
Preference number: 5 (lower is better)
Translates to: VSSWRVKSCSLAVSRALFSFLPV*LRKVLF
Trigger: AAATAGGACTTTCCTAAGCAAAACAGGAAGGAAAGA...GAAAAGAGCCCTGGATACAGCTAGAGAGCAGGACTTCACCCTCCAGGAGCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR CAA 90 bp AGTGGCCCACAGCTTATGCATATGTACATGCCCTCCAACAGTTCAGTTTGTAAAAGGGGAGACAGGGGATaGAACTCATGTGCACAAGCA +
Preference number: 5 (lower is better)
Translates to: SGPQLMHMYMPSNSSVCKRGDRG*NSCAQA
Trigger: TGCTTGTGCACATGAGTTCAATCCCCTGTCTCCCCT...TTTACAAACTGAACTGTTGGAGGGCATGTACATATGCATAAGCTGTGGGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261530.12
CDS-3UTR CAA 90 bp GGCTCAAAGGCAAGCCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTCACAAAGTCCAACATTaGCTTCAGCAACACCCAGTC +
Preference number: 5 (lower is better)
Translates to: GSKASLISCEHNSIQVSTHKVQH*LQQHPV
Trigger: GACTGGGTGTTGCTGAAGCAAATGTTGGACTTTGTG...AGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGGCTTGCCTTTGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CAA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCAAGGGGCAATCGCACTTaGGGGGAAGGAGGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSRGNRT*GEGGAA
Trigger: GGCAGCACCTCCTTCCCCCAAAGTGCGATTGCCCCT...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACCCTAGGGACCACACATaGAGAATTCCTGCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYPRDHT*RIPALG
Trigger: GCCCAGAGCAGGAATTCTCAATGTGTGGTCCCTAGG...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCAGCATGACATCGCTATaGGTCTCCAACCCCTGCAAA +
Preference number: 5 (lower is better)
Translates to: CKSVHISVPALYAQWASCSMTSL*VSNPCK
Trigger: TTTGCAGGGGTTGGAGACCAATAGCGATGTCATGCT...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp CCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTCAATATTTAAATTTGTGGAGGAGCCCCTTTaGGGCACAGGCCCCCTTACC +
Preference number: 5 (lower is better)
Translates to: PYLLRTQFHTGLNSIFKFVEEPL*GTGPLT
Trigger: GGTAAGGGGGCCTGTGCCCAAAAGGGGCTCCTCCAC...AAATTTAAATATTGAGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp ATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAGAAAAGTGCCCTCCTCCTaGCTGCCAAAATACCCTGTC +
Preference number: 5 (lower is better)
Translates to: ICVCVCVCVCIHTSSFSRKVPSS*LPKYPV
Trigger: GACAGGGTATTTTGGCAGCAAGGAGGAGGGCACTTT...TCTACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp GAAAGTGGAACCCCAAGTTTCACTGTATTCATAGGGCTAGTGCTGATGCCCCAAATCTCAGTTCCAGCTTaGTATGCACAATGGGCCAGT +
Preference number: 5 (lower is better)
Translates to: ESGTPSFTVFIGLVLMPQISVPA*YAQWAS
Trigger: ACTGGCCCATTGTGCATACAAAGCTGGAACTGAGAT...TTGGGGCATCAGCACTAGCCCTATGAATACAGTGAAACTTGGGGTTCCACTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS TCA 90 bp GTTTCAGTTTCTTGCTGGAGTCTACCCTCAGCTCTTAGAGACTGCTaGCAGTTCCTTGCCACTTGGGCTTCTCCAATATGGCCATTTATT +
Preference number: 5 (lower is better)
Translates to: VSVSCWSLPSALRDC*QFLATWASPIWPFI
Trigger: AATAAATGGCCATATTGGAGAAGCCCAAGTGGCAAGGAACTGTCAGCAGTCTCTAAGAGCTGAGGGTAGACTCCAGCAAGAAACTGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556675.2
CDS GCA 90 bp CAGAACAGCACAAACTTGAACATGGAACGAAGTCATCAAACAACTTaGAGTCGAATGCCTGTGCAGAATCCTTTCCTGCCTCAAAGCCTG +
Preference number: 5 (lower is better)
Translates to: QNSTNLNMERSHQTT*SRMPVQNPFLPQSL
Trigger: CAGGCTTTGAGGCAGGAAAGGATTCTGCACAGGCATTCGACTGCAAGTTGTTTGATGACTTCGTTCCATGTTCAAGTTTGTGCTGTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557207.1
CDS CCA 90 bp GCTGATGGTAACCAGAAATCTTTCTGCCGAGGGTCACTAATGATATaGCTTATCCTCTCAGTCCCCAAAGTGTTTATGCTGGTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: ADGNQKSFCRGSLMI*LILSVPKVFMLVSF
Trigger: GAAGGAGACCAGCATAAACACTTTGGGGACTGAGAGGATAAGCCATATCATTAGTGACCCTCGGCAGAAAGATTTCTGGTTACCATCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312858.9
ENST00000554375.5
ENST00000621494.1
CDS CCA 90 bp GAGGCTCAACTGAGGAAAGATCTGCTCCAAGCTTCTTCAGGTTGTTaGCAGAATTTATTTCCTTGTGGCTGTCAGACTGAGGGTTTCAGT +
Preference number: 5 (lower is better)
Translates to: EAQLRKDLLQASSGC*QNLFPCGCQTEGFS
Trigger: ACTGAAACCCTCAGTCTGACAGCCACAAGGAAATAAATTCTGCCAACAACCTGAAGAAGCTTGGAGCAGATCTTTCCTCAGTTGAGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556675.2
CDS-3UTR CAA 90 bp CAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAAGAGCTGGGTGTCGTTaGGCTACCATTGTGTCATCA +
Preference number: 5 (lower is better)
Translates to: QSVCVCVCVCVYTRPLSVRAGCR*ATIVSS
Trigger: TGATGACACAATGGTAGCCAAACGACACCCAGCTCT...TACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CAA 90 bp GAGTTGGTTCTGGTGGTGAAAGGACTGGGAATGTCGATTAAGATATGCAAGACTCTCTTGACAATGGCATaGAGAGCTGGGTGTCGTTTG +
Preference number: 5 (lower is better)
Translates to: ELVLVVKGLGMSIKICKTLLTMA*RAGCRL
Trigger: CAAACGACACCCAGCTCTCAATGCCATTGTCAAGAG...AGTCTTGCATATCTTAATCGACATTCCCAGTCCTTTCACCACCAGAACCAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554375.5
ENST00000621494.1
CDS-3UTR CAA 90 bp CAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTACTCTTGACAATGGCATaGAGAGCTGGGTGTCGTTTG +
Preference number: 5 (lower is better)
Translates to: QSVCVCVCVCVYTRPLSVLLTMA*RAGCRL
Trigger: CAAACGACACCCAGCTCTCAATGCCATTGTCAAGAG...TACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CAA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCATGTCGCCCTTCATCATaGGTAAAGAGCCCAGTGTCA +
Preference number: 5 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSCRPSS*VKSPVS
Trigger: TGACACTGGGCTCTTTACCAATGATGAAGGGCGACA...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp AACACATTCCAGTTGGCTCCATTAACTTCAGGGAGTTCTGTAGCACCTCTGATTTGTCGCCCTTCATCATaGGTAAAGAGCCCAGTGTCA +
Preference number: 5 (lower is better)
Translates to: NTFQLAPLTSGSSVAPLICRPSS*VKSPVS
Trigger: TGACACTGGGCTCTTTACCAATGATGAAGGGCGACA...AATCAGAGGTGCTACAGAACTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR CAA 90 bp GAGTTGGTTCTGGTGGTGAAAGGACTGGGAATGTCGATTAAGATATGCAAGACTCTGTTCGTCATCACCTaGTCGCCCTTCATCATTGGT +
Preference number: 5 (lower is better)
Translates to: ELVLVVKGLGMSIKICKTLFVIT*SPFIIG
Trigger: ACCAATGATGAAGGGCGACAAGGTGATGACGAACAG...AGTCTTGCATATCTTAATCGACATTCCCAGTCCTTTCACCACCAGAACCAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554375.5
ENST00000621494.1
CDS-3UTR CAA 90 bp ATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAGACTGTTCGTCATCACCTaGTCGCCCTTCATCATTGGT +
Preference number: 5 (lower is better)
Translates to: ICVCVCVCVCIHTSSFSRLFVIT*SPFIIG
Trigger: ACCAATGATGAAGGGCGACAAGGTGATGACGAACAG...TCTACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CAA 90 bp TTCACTCTTGTAAACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGCTGTTCGTCATCACCTaGTCGCCCTTCATCATTGGT +
Preference number: 5 (lower is better)
Translates to: FTLVNSQHIPVGSINFRELFVIT*SPFIIG
Trigger: ACCAATGATGAAGGGCGACAAGGTGATGACGAACAG...CTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTTTACAAGAGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR CAA 90 bp GAGTTGGTTCTGGTGGTGAAAGGACTGGGAATGTCGATTAAGATATGCAAGACTGGTTTCCGCTTCCTCTaGATGTCACGTGAACATGGT +
Preference number: 5 (lower is better)
Translates to: ELVLVVKGLGMSIKICKTGFRFL*MSREHG
Trigger: ACCATGTTCACGTGACATCAAGAGGAAGCGGAAACC...AGTCTTGCATATCTTAATCGACATTCCCAGTCCTTTCACCACCAGAACCAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554375.5
ENST00000621494.1
CDS-3UTR CAA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCCACAAAGTCCAACATTaGCTTCAGCAACACCCAGTC +
Preference number: 5 (lower is better)
Translates to: CKSVHISVPALYAQWASCHKVQH*LQQHPV
Trigger: GACTGGGTGTTGCTGAAGCAAATGTTGGACTTTGTG...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp AAGCAGATGCATGAGTGGGAGTCCCTCTACAATGTGACCAGAGCAGGGAGCACTATTTACAACCCTGTGTaGGAAAGTATTTGTGTGCTT +
Preference number: 5 (lower is better)
Translates to: KQMHEWESLYNVTRAGSTIYNPV*ESICVL
Trigger: AAGCACACAAATACTTTCCAACACAGGGTTGTAAAT...AGTGCTCCCTGCTCTGGTCACATTGTAGAGGGACTCCCACTCATGCATCTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCAGAAAAGGGGTTCGTCTaGGGCAGGACAGGCACTGGC +
Preference number: 5 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSEKGFV*GRTGTG
Trigger: GCCAGTGCCTGTCCTGCCCAAGACGAACCCCTTTTC...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp GCAGAAAGCCACAGATTAAAGACAGCATTAGGTGGAGGAGCCCCTTTTGGGCACGATAATACCTTCTTATaGCCACAGGTTTGCAAGATC +
Preference number: 5 (lower is better)
Translates to: AESHRLKTALGGGAPFGHDNTFL*PQVCKI
Trigger: GATCTTGCAAACCTGTGGCAATAAGAAGGTATTATC...GTGCCCAAAAGGGGCTCCTCCACCTAATGCTGTCTTTAATCTGTGGCTTTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS GCA 90 bp CTGAGTGGTCGACAAGGTGCATTTTCAGTAAAGGAGTCAGATTCATaGCAAGAATGTTGCTTACTCTTGACAATGGCATTGAGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: LSGRQGAFSVKESDS*QECCLLLTMALRAG
Trigger: CCCAGCTCTCAATGCCATTGTCAAGAGTAAGCAACATTCTTGGCATGAATCTGACTCCTTTACTGAAAATGCACCTTGTCGACCACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554125.5
ENST00000554375.5
ENST00000556109.1
ENST00000556663.5
ENST00000557263.5
ENST00000621494.1
CDS-3UTR CAA 90 bp GAGTTGGTTCTGGTGGTGAAAGGACTGGGAATGTCGATTAAGATATGCAAGACTTCAGAGTCACTAAAATaGGTCACCGGAGCCACTTCT +
Preference number: 5 (lower is better)
Translates to: ELVLVVKGLGMSIKICKTSESLK*VTGATS
Trigger: AGAAGTGGCTCCGGTGACCAATTTTAGTGACTCTGA...AGTCTTGCATATCTTAATCGACATTCCCAGTCCTTTCACCACCAGAACCAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554375.5
ENST00000621494.1
CDS-3UTR CAA 90 bp ACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTAATGACAGTGTTTAGAGCTGGGTGTCGTTaGGCTACCATTGTGTCATCA +
Preference number: 5 (lower is better)
Translates to: TQLRLVGLQAIDTVMTVFRAGCR*ATIVSS
Trigger: TGATGACACAATGGTAGCCAAACGACACCCAGCTCT...AAACACTGTCATTACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR CAA 90 bp AAAGTTACAGAAGACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTCTCTTGACAATGGCATaGAGAGCTGGGTGTCGTTTG +
Preference number: 5 (lower is better)
Translates to: KVTEDTAQACRFTGNRHCLLTMA*RAGCRL
Trigger: CAAACGACACCCAGCTCTCAATGCCATTGTCAAGAG...ACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGTCTTCTGTAACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR CAA 90 bp AAGTTACAGAAGACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTACTCTTGACAATGGCATaGAGAGCTGGGTGTCGTTTG +
Preference number: 5 (lower is better)
Translates to: KLQKTQLRLVGLQAIDTVLLTMA*RAGCRL
Trigger: CAAACGACACCCAGCTCTCAATGCCATTGTCAAGAG...TACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGTCTTCTGTAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR CAA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACTGCTTCTTAGCAGACTaGAACCTGCAGCCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYCFLAD*NLQPLS
Trigger: TGAGAGAGGCTGCAGGTTCAAGTCTGCTAAGAAGCA...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CAA 90 bp AAAGTTACAGAAGACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTTGCTTCTTAGCAGACTaGAACCTGCAGCCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: KVTEDTAQACRFTGNRHCCFLAD*NLQPLS
Trigger: TGAGAGAGGCTGCAGGTTCAAGTCTGCTAAGAAGCA...ACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGTCTTCTGTAACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR CAA 90 bp GCAGAAAGCCACAGATTAAAGACAGCATTAGGTGGAGGAGCCCCTTTTGGGCACTCTTTCCTTCCTGTTTaGCTTAGGAAAGTCCTATTT +
Preference number: 5 (lower is better)
Translates to: AESHRLKTALGGGAPFGHSFLPV*LRKVLF
Trigger: AAATAGGACTTTCCTAAGCAAAACAGGAAGGAAAGA...GTGCCCAAAAGGGGCTCCTCCACCTAATGCTGTCTTTAATCTGTGGCTTTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp ACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTAATGACAGTGTTTTGTCGCCCTTCATCATaGGTAAAGAGCCCAGTGTCA +
Preference number: 5 (lower is better)
Translates to: TQLRLVGLQAIDTVMTVFCRPSS*VKSPVS
Trigger: TGACACTGGGCTCTTTACCAATGATGAAGGGCGACA...AAACACTGTCATTACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR CAA 90 bp ACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTAATGACAGTGTTTCTGTTCGTCATCACCTaGTCGCCCTTCATCATTGGT +
Preference number: 5 (lower is better)
Translates to: TQLRLVGLQAIDTVMTVFLFVIT*SPFIIG
Trigger: ACCAATGATGAAGGGCGACAAGGTGATGACGAACAG...AAACACTGTCATTACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR CAA 90 bp GCAGAAAGCCACAGATTAAAGACAGCATTAGGTGGAGGAGCCCCTTTTGGGCACGAACTGGCTACAAATTaGGAACTTCCTCAAATGATA +
Preference number: 5 (lower is better)
Translates to: AESHRLKTALGGGAPFGHELATN*ELPQMI
Trigger: TATCATTTGAGGAAGTTCCAAATTTGTAGCCAGTTC...GTGCCCAAAAGGGGCTCCTCCACCTAATGCTGTCTTTAATCTGTGGCTTTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACTCCCACTTCTCCACCTaGCCAAGATTGCTTCTTTGC +
Preference number: 5 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYSHFST*PRLLLC
Trigger: GCAAAGAAGCAATCTTGGCAAGGTGGAGAAGTGGGA...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp CAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTACTATGGTTCTCAAACTaGAGCATGCACCAAAGACCC +
Preference number: 5 (lower is better)
Translates to: QSVCVCVCVCVYTRPLSVLWFSN*SMHQRP
Trigger: GGGTCTTTGGTGCATGCTCAAGTTTGAGAACCATAG...TACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp GCAGAAAGCCACAGATTAAAGACAGCATTAGGTGGAGGAGCCCCTTTTGGGCACGTAACACTAACATTTTaGGCCAGAGGTAGTTTTAAC +
Preference number: 5 (lower is better)
Translates to: AESHRLKTALGGGAPFGHVTLTF*ARGSFN
Trigger: GTTAAAACTACCTCTGGCCAAAAATGTTAGTGTTAC...GTGCCCAAAAGGGGCTCCTCCACCTAATGCTGTCTTTAATCTGTGGCTTTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCAATCGTTACCATGACTTaGGGGTGGCATCAGTTTGCA +
Preference number: 5 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSIVTMT*GWHQFA
Trigger: TGCAAACTGATGCCACCCCAAAGTCATGGTAACGAT...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp AGTGGCCCACAGCTTATGCATATGTACATGCCCTCCAACAGTTCAGTTTGTAAAATCGTTACCATGACTTaGGGGTGGCATCAGTTTGCA +
Preference number: 5 (lower is better)
Translates to: SGPQLMHMYMPSNSSVCKIVTMT*GWHQFA
Trigger: TGCAAACTGATGCCACCCCAAAGTCATGGTAACGAT...TTTACAAACTGAACTGTTGGAGGGCATGTACATATGCATAAGCTGTGGGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCACAACAGGAGGGAGTTaGACATCAATACTGAGAGCA +
Preference number: 5 (lower is better)
Translates to: CKSVHISVPALYAQWASCTTGGS*TSILRA
Trigger: TGCTCTCAGTATTGATGTCAAACTCCCTCCTGTTGT...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp GGCTCAAAGGCAAGCCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTCAGGCTTTCAAAGGGTaGAGGAAAGGTCTTTTGTTT +
Preference number: 5 (lower is better)
Translates to: GSKASLISCEHNSIQVSTQAFKG*RKGLLF
Trigger: AAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCTG...AGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGGCTTGCCTTTGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp CCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTCAATATTTAAATTTCCTACCTCACTGGGCTaGGAGGAGGAACAAGGGAGG +
Preference number: 5 (lower is better)
Translates to: PYLLRTQFHTGLNSIFKFPTSLG*EEEQGR
Trigger: CCTCCCTTGTTCCTCCTCCAAGCCCAGTGAGGTAGG...AAATTTAAATATTGAGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp GCAGAAAGCCACAGATTAAAGACAGCATTAGGTGGAGGAGCCCCTTTTGGGCACCACCTACCCCATATTTaGAATCAGAAACTAGTGATT +
Preference number: 5 (lower is better)
Translates to: AESHRLKTALGGGAPFGHHLPHI*NQKLVI
Trigger: AATCACTAGTTTCTGATTCAAAATATGGGGTAGGTG...GTGCCCAAAAGGGGCTCCTCCACCTAATGCTGTCTTTAATCTGTGGCTTTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp GGCTCAAAGGCAAGCCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTCCTTTGTTATTCTTATaGGCTGTCCAGCATCTGAAG +
Preference number: 5 (lower is better)
Translates to: GSKASLISCEHNSIQVSTPLLFL*AVQHLK
Trigger: CTTCAGATGCTGGACAGCCAATAAGAATAACAAAGG...AGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGGCTTGCCTTTGAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp GCAGAAAGCCACAGATTAAAGACAGCATTAGGTGGAGGAGCCCCTTTTGGGCACTTGCTTGGTTTACTTTaGCTCAACCTTTCTGAATCT +
Preference number: 5 (lower is better)
Translates to: AESHRLKTALGGGAPFGHLLGLL*LNLSES
Trigger: AGATTCAGAAAGGTTGAGCAAAAGTAAACCAAGCAA...GTGCCCAAAAGGGGCTCCTCCACCTAATGCTGTCTTTAATCTGTGGCTTTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp GCAGAAAGCCACAGATTAAAGACAGCATTAGGTGGAGGAGCCCCTTTTGGGCACCAACTAACATTGTATTaGTTTCTTCCTGTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: AESHRLKTALGGGAPFGHQLTLY*FLPVSP
Trigger: AGGAGACACAGGAAGAAACAAATACAATGTTAGTTG...GTGCCCAAAAGGGGCTCCTCCACCTAATGCTGTCTTTAATCTGTGGCTTTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp AAGTTACAGAAGACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTACCCAACACATTCCAGTaGGCTCCATTAACTTCAGGG +
Preference number: 5 (lower is better)
Translates to: KLQKTQLRLVGLQAIDTVPNTFQ*APLTSG
Trigger: CCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGG...TACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGTCTTCTGTAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS TCA 90 bp GAAACACAGAGTAGCACATGGTCTCATCGAGGTATTGAGAATGAATaGAAAACTGTTCTTTGGCCTGGGGTCACTGCTGACAATGACCAT +
Preference number: 5 (lower is better)
Translates to: ETQSSTWSHRGIENE*KTVLWPGVTADNDH
Trigger: ATGGTCATTGTCAGCAGTGACCCCAGGCCAAAGAACAGTTTTTCATTCATTCTCAATACCTCGATGAGACCATGTGCTACTCTGTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556663.5
CDS GCA 90 bp GTCATCAAACAACTTGCAGTCGAATGCCTGTGCAGAATCCTTTCCTaGCTCAAAGCCTGTAATTCCAACAGTAGTGACAAAAGAACCCTA +
Preference number: 5 (lower is better)
Translates to: VIKQLAVECLCRILS*LKACNSNSSDKRTL
Trigger: TAGGGTTCTTTTGTCACTACTGTTGGAATTACAGGCTTTGAGGCAGGAAAGGATTCTGCACAGGCATTCGACTGCAAGTTGTTTGATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557207.1
CDS-3UTR CAA 90 bp ACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTAATGACAGTGTTTTCAGAGTCACTAAAATaGGTCACCGGAGCCACTTCT +
Preference number: 5 (lower is better)
Translates to: TQLRLVGLQAIDTVMTVFSESLK*VTGATS
Trigger: AGAAGTGGCTCCGGTGACCAATTTTAGTGACTCTGA...AAACACTGTCATTACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR CAA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGCTCTTGACAATGGCATaGAGAGCTGGGTGTCGTTTG +
Preference number: 5 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVLLTMA*RAGCRL
Trigger: CAAACGACACCCAGCTCTCAATGCCATTGTCAAGAG...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp TGCAAATCTGTTCACATCTCAGTTCCAGCTTTGTATGCACAATGGGCCAGTTGCGAATGTTGCTTACTCTaGACAATGGCATTGAGAGCT +
Preference number: 5 (lower is better)
Translates to: CKSVHISVPALYAQWASCECCLL*TMALRA
Trigger: AGCTCTCAATGCCATTGTCAAGAGTAAGCAACATTC...GCAACTGGCCCATTGTGCATACAAAGCTGGAACTGAGATGTGAACAGATTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGGGTTTCCGCTTCCTCTaGATGTCACGTGAACATGGT +
Preference number: 5 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVGFRFL*MSREHG
Trigger: ACCATGTTCACGTGACATCAAGAGGAAGCGGAAACC...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACGTCATAACTAGTCGCTaGTCCAGGGTGTTGTGCTTT +
Preference number: 5 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYVITSR*SRVLCF
Trigger: AAAGCACAACACCCTGGACAAGCGACTAGTTATGAC...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCAGCTGTTTCCGGGCATTaGATGTTCATCTTTTGGAGA +
Preference number: 5 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSAVSGH*MFIFWR
Trigger: TCTCCAAAAGATGAACATCAAATGCCCGGAAACAGC...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp AGTGGCCCACAGCTTATGCATATGTACATGCCCTCCAACAGTTCAGTTTGTAAATCATCTTCCTTCTTTTaGATGTTGCTGTTTCCGGGC +
Preference number: 5 (lower is better)
Translates to: SGPQLMHMYMPSNSSVCKSSSFF*MLLFPG
Trigger: GCCCGGAAACAGCAACATCAAAAAGAAGGAAGATGA...TTTACAAACTGAACTGTTGGAGGGCATGTACATATGCATAAGCTGTGGGCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp CTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGGTGGCATCAGTTaGCATGGTCGTGAGATTTTT +
Preference number: 5 (lower is better)
Translates to: LNHLLHYTNLCVCVCVCVWGGIS*HGREIF
Trigger: AAAAATCTCACGACCATGCAAACTGATGCCACCCCA...CACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp GGCTCAAAGGCAAGCCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTCTTATTGCCACAGGTTaGCAAGATCTGCAAAATTTC +
Preference number: 5 (lower is better)
Translates to: GSKASLISCEHNSIQVSTLIATG*QDLQNF
Trigger: GAAATTTTGCAGATCTTGCAAACCTGTGGCAATAAG...AGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGGCTTGCCTTTGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp ACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTAATGACAGTGTTTGAGAAGAGACTAAGTTaGCGCCCATTCTGGTACCAA +
Preference number: 5 (lower is better)
Translates to: TQLRLVGLQAIDTVMTVFEKRLS*RPFWYQ
Trigger: TTGGTACCAGAATGGGCGCAAACTTAGTCTCTTCTC...AAACACTGTCATTACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556663.5
CDS-3UTR CAA 90 bp TTCACTCTTGTAAACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGTGTAGTGACCCAGGTTaGAAGTCAGAATGGAGAAGA +
Preference number: 5 (lower is better)
Translates to: FTLVNSQHIPVGSINFRECSDPG*KSEWRR
Trigger: TCTTCTCCATTCTGACTTCAAACCTGGGTCACTACA...CTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTTTACAAGAGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556663.5
CDS-3UTR CAA 90 bp AACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGTTCTGTAGCACCAAAATCACACTAGAGTaGTGGAAACACAGAGTAGCA +
Preference number: 5 (lower is better)
Translates to: NSQHIPVGSINFREFCSTKITLE*WKHRVA
Trigger: TGCTACTCTGTGTTTCCACAACTCTAGTGTGATTTT...GGTGCTACAGAACTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556663.5
CDS-3UTR CAA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGTCAGAGTCACTAAAATaGGTCACCGGAGCCACTTCT +
Preference number: 5 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVSESLK*VTGATS
Trigger: AGAAGTGGCTCCGGTGACCAATTTTAGTGACTCTGA...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCAGAATGTTGCTTACTCTaGACAATGGCATTGAGAGCT +
Preference number: 5 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSECCLL*TMALRA
Trigger: AGCTCTCAATGCCATTGTCAAGAGTAAGCAACATTC...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp GAGTTGGTTCTGGTGGTGAAAGGACTGGGAATGTCGATTAAGATATGCAAGACTGAATGTTGCTTACTCTaGACAATGGCATTGAGAGCT +
Preference number: 5 (lower is better)
Translates to: ELVLVVKGLGMSIKICKTECCLL*TMALRA
Trigger: AGCTCTCAATGCCATTGTCAAGAGTAAGCAACATTC...AGTCTTGCATATCTTAATCGACATTCCCAGTCCTTTCACCACCAGAACCAACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554375.5
ENST00000621494.1
CDS-3UTR CAA 90 bp AACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGTTCTGTAGCACCTCTTTCCTTCCTGTTTaGCTTAGGAAAGTCCTATTT +
Preference number: 5 (lower is better)
Translates to: NSQHIPVGSINFREFCSTSFLPV*LRKVLF
Trigger: AAATAGGACTTTCCTAAGCAAAACAGGAAGGAAAGA...GGTGCTACAGAACTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR CAA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTTGTCGCCCTTCATCATaGGTAAAGAGCCCAGTGTCA +
Preference number: 5 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCCRPSS*VKSPVS
Trigger: TGACACTGGGCTCTTTACCAATGATGAAGGGCGACA...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CAA 90 bp CACTTCACCTGGACTTTCATTAACATGGACCTAATTTCCTGTCTGCTAAAACAAGGTTTCCGCTTCCTCTaGATGTCACGTGAACATGGT +
Preference number: 5 (lower is better)
Translates to: HFTWTFINMDLISCLLKQGFRFL*MSREHG
Trigger: ACCATGTTCACGTGACATCAAGAGGAAGCGGAAACC...TTGTTTTAGCAGACAGGAAATTAGGTCCATGTTAATGAAAGTCCAGGTGAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553588.1
CDS-3UTR CAA 90 bp TTGGAACTTCCTCAAATGATATTAAAAGCTCTACACAAAAGGTATGCAGAAGCATCAGAGCTGGGTGATTaGGGGGCTTGTGATGCTGGT +
Preference number: 5 (lower is better)
Translates to: LELPQMILKALHKRYAEASELGD*GACDAG
Trigger: ACCAGCATCACAAGCCCCCAAATCACCCAGCTCTGA...TGCTTCTGCATACCTTTTGTGTAGAGCTTTTAATATCATTTGAGGAAGTTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CAA 90 bp CCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTCAATATTTAAATTTTCAGAGCTGGGTGATTaGGGGGCTTGTGATGCTGGT +
Preference number: 5 (lower is better)
Translates to: PYLLRTQFHTGLNSIFKFSELGD*GACDAG
Trigger: ACCAGCATCACAAGCCCCCAAATCACCCAGCTCTGA...AAATTTAAATATTGAGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CAA 90 bp ATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAGAGGCCCCAAAACTTGGTaGATTTATCTTATTGGCACT +
Preference number: 5 (lower is better)
Translates to: ICVCVCVCVCIHTSSFSRGPKTW*IYLIGT
Trigger: AGTGCCAATAAGATAAATCAACCAAGTTTTGGGGCC...TCTACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CAA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGGCCAGCCTAGTTCCTTaGTCTCAACACTCTGTATCT +
Preference number: 5 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVASLVP*SQHSVS
Trigger: AGATACAGAGTGTTGAGACAAAGGAACTAGGCTGGC...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp CTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGGCTGTTTCCGGGCATTaGATGTTCATCTTTTGGAGA +
Preference number: 5 (lower is better)
Translates to: LNHLLHYTNLCVCVCVCVAVSGH*MFIFWR
Trigger: TCTCCAAAAGATGAACATCAAATGCCCGGAAACAGC...CACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp TGGAGGTTTTCACTAATAGGCCATGATCATGGGACCAATCACTGCATGAGTCATGTGACTCGAGCAAGTTaGTCTGTAACTGTAAGTGTA +
Preference number: 5 (lower is better)
Translates to: WRFSLIGHDHGTNHCMSHVTRAS*SVTVSV
Trigger: TACACTTACAGTTACAGACAAACTTGCTCGAGTCAC...ATGACTCATGCAGTGATTGGTCCCATGATCATGGCCTATTAGTGAAAACCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGAGGCAGCAGAGGTATaGATTGGGAACAGACACTCT +
Preference number: 5 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCEAAEV*IGNRHS
Trigger: AGAGTGTCTGTTCCCAATCAATACCTCTGCTGCCTC...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp ATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAGATCATTGACTTTTCTCTaGCTCTGGTCACTCTCAAGA +
Preference number: 5 (lower is better)
Translates to: ICVCVCVCVCIHTSSFSRSLTFL*LWSLSR
Trigger: TCTTGAGAGTGACCAGAGCAAGAGAAAAGTCAATGA...TCTACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS TCA 90 bp AAGAATGCAGTTTTCGTGATCCAAGAAATTGTAGTGACCCAGGTTTaGAGTCAGAATGGAGAAGAGACTAAGTTTGCGCCCATTCTGGTA +
Preference number: 5 (lower is better)
Translates to: KNAVFVIQEIVVTQV*SQNGEETKFAPILV
Trigger: TACCAGAATGGGCGCAAACTTAGTCTCTTCTCCATTCTGACTTCAAACCTGGGTCACTACAATTTCTTGGATCACGAAAACTGCATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556663.5
CDS TCA 90 bp GTGACTTGTTTCCATGGAAGTGGATGGCTCTTATTTTATAAGAGCTaGAAGAAAGTAACACAGGTGGCAGGGGGAACATTATCTGTCAAG +
Preference number: 5 (lower is better)
Translates to: VTCFHGSGWLLFYKS*KKVTQVAGGTLSVK
Trigger: CTTGACAGATAATGTTCCCCCTGCCACCTGTGTTACTTTCTTTCAGCTCTTATAAAATAAGAGCCATCCACTTCCATGGAAACAAGTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554125.5
CDS CCA 90 bp TTCATGCCAAGAATGTTGCTTACTCTTGACAATGGCATTGAGAGCTaGGTGTCGTTTGGCTACCATTGTGTCATCAGAGTCACTAAAATT +
Preference number: 5 (lower is better)
Translates to: FMPRMLLTLDNGIES*VSFGYHCVIRVTKI
Trigger: AATTTTAGTGACTCTGATGACACAATGGTAGCCAAACGACACCCAGCTCTCAATGCCATTGTCAAGAGTAAGCAACATTCTTGGCATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554125.5
ENST00000554375.5
ENST00000556109.1
ENST00000556663.5
ENST00000557263.5
ENST00000621494.1
CDS CCA 90 bp AGGCTGTTCTTCAAACACATTTGTGTCTATATTCATCTATGTGTGTaGACCGTGCTAAACATCAGGCTACACATTTCAGCAGAACTGGCT +
Preference number: 5 (lower is better)
Translates to: RLFFKHICVYIHLCV*TVLNIRLHISAELA
Trigger: AGCCAGTTCTGCTGAAATGTGTAGCCTGATGTTTAGCACGGTCCACACACATAGATGAATATAGACACAAATGTGTTTGAAGAACAGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554125.5
CDS-3UTR CAA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCAAGAGCTGGGTGTCGTTaGGCTACCATTGTGTCATCA +
Preference number: 5 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSRAGCR*ATIVSS
Trigger: TGATGACACAATGGTAGCCAAACGACACCCAGCTCT...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CAA 90 bp ACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTAATGACAGTGTTTGAATGTTGCTTACTCTaGACAATGGCATTGAGAGCT +
Preference number: 5 (lower is better)
Translates to: TQLRLVGLQAIDTVMTVFECCLL*TMALRA
Trigger: AGCTCTCAATGCCATTGTCAAGAGTAAGCAACATTC...AAACACTGTCATTACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR CAA 90 bp AAAGTTACAGAAGACACAGCTCAGGCTTGTAGGTTTACAGGCAATAGACACTGTGAATGTTGCTTACTCTaGACAATGGCATTGAGAGCT +
Preference number: 5 (lower is better)
Translates to: KVTEDTAQACRFTGNRHCECCLL*TMALRA
Trigger: AGCTCTCAATGCCATTGTCAAGAGTAAGCAACATTC...ACAGTGTCTATTGCCTGTAAACCTACAAGCCTGAGCTGTGTCTTCTGTAACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR CAA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCATGCTTCTTAGCAGACTaGAACCTGCAGCCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSCFLAD*NLQPLS
Trigger: TGAGAGAGGCTGCAGGTTCAAGTCTGCTAAGAAGCA...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CAA 90 bp ACGCAGGATTCTGATGTTGAACTAAACCATATGCAAATCAGATTCATTCTGCTTTGTCGCCCTTCATCATaGGTAAAGAGCCCAGTGTCA +
Preference number: 5 (lower is better)
Translates to: TQDSDVELNHMQIRFILLCRPSS*VKSPVS
Trigger: TGACACTGGGCTCTTTACCAATGATGAAGGGCGACA...AAGCAGAATGAATCTGATTTGCATATGGTTTAGTTCAACATCAGAATCCTGCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR CAA 90 bp ACGCAGGATTCTGATGTTGAACTAAACCATATGCAAATCAGATTCATTCTGCTTGGTTTCCGCTTCCTCTaGATGTCACGTGAACATGGT +
Preference number: 5 (lower is better)
Translates to: TQDSDVELNHMQIRFILLGFRFL*MSREHG
Trigger: ACCATGTTCACGTGACATCAAGAGGAAGCGGAAACC...AAGCAGAATGAATCTGATTTGCATATGGTTTAGTTCAACATCAGAATCCTGCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554375.5
CDS-3UTR CAA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTCACAAAGTCCAACATTaGCTTCAGCAACACCCAGTC +
Preference number: 5 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCHKVQH*LQQHPV
Trigger: GACTGGGTGTTGCTGAAGCAAATGTTGGACTTTGTG...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CAA 90 bp CTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGGCATCTCTCTACCACTaGCATTTAGTTCTGAGTGAT +
Preference number: 5 (lower is better)
Translates to: LNHLLHYTNLCVCVCVCVASLYH*HLVLSD
Trigger: ATCACTCAGAACTAAATGCAAGTGGTAGAGAGATGC...CACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp TGGAGGTTTTCACTAATAGGCCATGATCATGGGACCAATCACTGCATGAGTCATTTTGATGTTCATCTTTaGGAGACGTTAACACAGGAG +
Preference number: 5 (lower is better)
Translates to: WRFSLIGHDHGTNHCMSHFDVHL*ETLTQE
Trigger: CTCCTGTGTTAACGTCTCCAAAAGATGAACATCAAA...ATGACTCATGCAGTGATTGGTCCCATGATCATGGCCTATTAGTGAAAACCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp TGCTCTGAAGTACTGAGATTCAGTCCTAGCAAGAGATTACCAATAACTCAACAGTCATCTTCCTTCTTTTaGATGTTGCTGTTTCCGGGC +
Preference number: 5 (lower is better)
Translates to: CSEVLRFSPSKRLPITQQSSSFF*MLLFPG
Trigger: GCCCGGAAACAGCAACATCAAAAAGAAGGAAGATGA...CTGTTGAGTTATTGGTAATCTCTTGCTAGGACTGAATCTCAGTACTTCAGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp ACTCAGGCTTTCAAAGGGTTGAGGAAAGGTCTTTTGTTTGAAGGAAGGAGTATCCAGGCTTTCAAAGGGTaGAGGAAAGGTCTTTTGTTT +
Preference number: 5 (lower is better)
Translates to: TQAFKGLRKGLLFEGRSIQAFKG*RKGLLF
Trigger: AAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCTG...GATACTCCTTCCTTCAAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACTCATTGACTTTTCTCTaGCTCTGGTCACTCTCAAGA +
Preference number: 5 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYSLTFL*LWSLSR
Trigger: TCTTGAGAGTGACCAGAGCAAGAGAAAAGTCAATGA...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCACTTATTGCCACAGGTTaGCAAGATCTGCAAAATTTC +
Preference number: 5 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSLIATG*QDLQNF
Trigger: GAAATTTTGCAGATCTTGCAAACCTGTGGCAATAAG...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp TGGAGGTTTTCACTAATAGGCCATGATCATGGGACCAATCACTGCATGAGTCATCTTGTTTGTGTTTGCTaGGTTTACTTTTGCTCAACC +
Preference number: 5 (lower is better)
Translates to: WRFSLIGHDHGTNHCMSHLVCVC*VYFCST
Trigger: GGTTGAGCAAAAGTAAACCAAGCAAACACAAACAAG...ATGACTCATGCAGTGATTGGTCCCATGATCATGGCCTATTAGTGAAAACCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp TGGAGGTTTTCACTAATAGGCCATGATCATGGGACCAATCACTGCATGAGTCATATACATCTCCTATTCTaGGATAGGATGACACCACAT +
Preference number: 5 (lower is better)
Translates to: WRFSLIGHDHGTNHCMSHIHLLF*DRMTPH
Trigger: ATGTGGTGTCATCCTATCCAAGAATAGGAGATGTAT...ATGACTCATGCAGTGATTGGTCCCATGATCATGGCCTATTAGTGAAAACCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261530.12
CDS-3UTR CAA 90 bp TTCACTCTTGTAAACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGGGTCTCATCGAGGTATaGAGAATGAATGAAAAACTG +
Preference number: 5 (lower is better)
Translates to: FTLVNSQHIPVGSINFREGLIEV*RMNEKL
Trigger: CAGTTTTTCATTCATTCTCAATACCTCGATGAGACC...CTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTTTACAAGAGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556663.5
CDS CCA 90 bp TCTGCCACAGAGGTTCCAATCTTGGTTCTATTAGCTGTATCACTTTaGGCAAATAGTTTGAATCTTACAGATCTCCAGTTCGTCATTTGC +
Preference number: 5 (lower is better)
Translates to: SATEVPILVLLAVSL*ANSLNLTDLQFVIC
Trigger: GCAAATGACGAACTGGAGATCTGTAAGATTCAAACTATTTGCCCAAAGTGATACAGCTAATAGAACCAAGATTGGAACCTCTGTGGCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554125.5
CDS-3UTR CAA 90 bp TTGGAACTTCCTCAAATGATATTAAAAGCTCTACACAAAAGGTATGCAGAAGCATGCTTCTTAGCAGACTaGAACCTGCAGCCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: LELPQMILKALHKRYAEACFLAD*NLQPLS
Trigger: TGAGAGAGGCTGCAGGTTCAAGTCTGCTAAGAAGCA...TGCTTCTGCATACCTTTTGTGTAGAGCTTTTAATATCATTTGAGGAAGTTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CAA 90 bp ATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACGTCCTCTTTCAGTAGATCTTTCCTTCCTGTTTaGCTTAGGAAAGTCCTATTT +
Preference number: 5 (lower is better)
Translates to: ICVCVCVCVCIHTSSFSRSFLPV*LRKVLF
Trigger: AAATAGGACTTTCCTAAGCAAAACAGGAAGGAAAGA...TCTACTGAAAGAGGACGTGTGTATACACACACACACACACACACACACACAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CAA 90 bp TTCACTCTTGTAAACTCCCAACACATTCCAGTTGGCTCCATTAACTTCAGGGAGTCTTTCCTTCCTGTTTaGCTTAGGAAAGTCCTATTT +
Preference number: 5 (lower is better)
Translates to: FTLVNSQHIPVGSINFRESFLPV*LRKVLF
Trigger: AAATAGGACTTTCCTAAGCAAAACAGGAAGGAAAGA...CTCCCTGAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTTTACAAGAGTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556663.5
ENST00000557263.5
CDS-3UTR CAA 90 bp GAACACACAGGGTCACATCTGATGAAAGTGGAACCCCAAGTTTCACTGTATTCAGAACTGGCTACAAATTaGGAACTTCCTCAAATGATA +
Preference number: 5 (lower is better)
Translates to: EHTGSHLMKVEPQVSLYSELATN*ELPQMI
Trigger: TATCATTTGAGGAAGTTCCAAATTTGTAGCCAGTTC...TGAATACAGTGAAACTTGGGGTTCCACTTTCATCAGATGTGACCCTGTGTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp CACTGTATTCATAGGGCTAGTGCTGATGCCCCAATAAAAAGTTCTTTGATAAAATTGCTGGTGTCTCTTTaGAGGCCCCAAAACTTGGTT +
Preference number: 5 (lower is better)
Translates to: HCIHRASADAPIKSSLIKLLVSL*RPQNLV
Trigger: AACCAAGTTTTGGGGCCTCAAAAGAGACACCAGCAA...TTTTATCAAAGAACTTTTTATTGGGGCATCAGCACTAGCCCTATGAATACAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp CCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACCTTGTTTGTGTTTGCTaGGTTTACTTTTGCTCAACC +
Preference number: 5 (lower is better)
Translates to: PSSPLYQSVCVCVCVCVYLVCVC*VYFCST
Trigger: GGTTGAGCAAAAGTAAACCAAGCAAACACAAACAAG...GTATACACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp ACTCAGGCTTTCAAAGGGTTGAGGAAAGGTCTTTTGTTTGAAGGAAGGAGTATCCTGGCTGGTGAGCTTTaGCTTGGATTCTATAAAATA +
Preference number: 5 (lower is better)
Translates to: TQAFKGLRKGLLFEGRSILAGEL*LGFYKI
Trigger: TATTTTATAGAATCCAAGCAAAAGCTCACCAGCCAG...GATACTCCTTCCTTCAAACAAAAGACCTTTCCTCAACCCTTTGAAAGCCTGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261530.12
CDS CCA 90 bp GAGTATGGTACCCTCTTTGAGCTGGCCGAGAAGGTAAAAGGAATGTaGAATCTGAAAATTTATCCAATCCAGAATCCATTCTTTCTACTT +
Preference number: 5 (lower is better)
Translates to: EYGTLFELAEKVKGM*NLKIYPIQNPFFLL
Trigger: AAGTAGAAAGAATGGATTCTGGATTGGATAAATTTTCAGATTCCACATTCCTTTTACCTTCTCGGCCAGCTCAAAGAGGGTACCATACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554125.5
ENST00000554375.5
ENST00000554799.1
ENST00000556663.5
ENST00000557263.5
ENST00000621494.1
CDS-3UTR CAA 90 bp CCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTCAATATTTAAATTTTTGCTGGTGTCTCTTTaGAGGCCCCAAAACTTGGTT +
Preference number: 5 (lower is better)
Translates to: PYLLRTQFHTGLNSIFKFLLVSL*RPQNLV
Trigger: AACCAAGTTTTGGGGCCTCAAAAGAGACACCAGCAA...AAATTTAAATATTGAGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CAA 90 bp CTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTGTGTGTGTGTGTGATTTACAACCCTGTGTaGGAAAGTATTTGTGTGCTT +
Preference number: 5 (lower is better)
Translates to: LNHLLHYTNLCVCVCVCVIYNPV*ESICVL
Trigger: AAGCACACAAATACTTTCCAACACAGGGTTGTAAAT...CACACACACACACACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp CCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTCAATATTTAAATTTGTCATAACTAGTCGCTaGTCCAGGGTGTTGTGCTTT +
Preference number: 5 (lower is better)
Translates to: PYLLRTQFHTGLNSIFKFVITSR*SRVLCF
Trigger: AAAGCACAACACCCTGGACAAGCGACTAGTTATGAC...AAATTTAAATATTGAGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp TTGGAACTTCCTCAAATGATATTAAAAGCTCTACACAAAAGGTATGCAGAAGCAGCCAGCCTAGTTCCTTaGTCTCAACACTCTGTATCT +
Preference number: 5 (lower is better)
Translates to: LELPQMILKALHKRYAEAASLVP*SQHSVS
Trigger: AGATACAGAGTGTTGAGACAAAGGAACTAGGCTGGC...TGCTTCTGCATACCTTTTGTGTAGAGCTTTTAATATCATTTGAGGAAGTTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp TTGGAACTTCCTCAAATGATATTAAAAGCTCTACACAAAAGGTATGCAGAAGCACTGAAAAGACAGAACTaGGATTTCTGGGCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: LELPQMILKALHKRYAEALKRQN*DFWALA
Trigger: TGCCAGAGCCCAGAAATCCAAGTTCTGTCTTTTCAG...TGCTTCTGCATACCTTTTGTGTAGAGCTTTTAATATCATTTGAGGAAGTTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTCCTTTGTTATTCTTATaGGCTGTCCAGCATCTGAAG +
Preference number: 5 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCPLLFL*AVQHLK
Trigger: CTTCAGATGCTGGACAGCCAATAAGAATAACAAAGG...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCAGGTTCTGGTGGACCTTaGTTATTCTTATTGGCTGTC +
Preference number: 5 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSGSGGP*LFLLAV
Trigger: GACAGCCAATAAGAATAACAAAGGTCCACCAGAACC...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp CCTTATCTCCTGCGAACACAATTCCATACAGGTCTCAACTCAATATTTAAATTTATCTCAGTTCCAGCTTaGTATGCACAATGGGCCAGT +
Preference number: 5 (lower is better)
Translates to: PYLLRTQFHTGLNSIFKFISVPA*YAQWAS
Trigger: ACTGGCCCATTGTGCATACAAAGCTGGAACTGAGAT...AAATTTAAATATTGAGTTGAGACCTGTATGGAATTGTGTTCGCAGGAGATAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp CATGTGGTAGCAAGTGACTTAAACTCTCTCAGCCTTCTTTTCTTCTTGTATAAACTTGAGAACTCCTACTaGCTCCTTAGCTTTCACCAA +
Preference number: 5 (lower is better)
Translates to: HVVASDLNSLSLLFFLYKLENSY*LLSFHQ
Trigger: TTGGTGAAAGCTAAGGAGCAAGTAGGAGTTCTCAAG...TTTATACAAGAAGAAAAGAAGGCTGAGAGAGTTTAAGTCACTTGCTACCACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556372.2
CDS-3UTR CAA 90 bp TGCTCTGAAGTACTGAGATTCAGTCCTAGCAAGAGATTACCAATAACTCAACAGGTAACACTAACATTTTaGGCCAGAGGTAGTTTTAAC +
Preference number: 5 (lower is better)
Translates to: CSEVLRFSPSKRLPITQQVTLTF*ARGSFN
Trigger: GTTAAAACTACCTCTGGCCAAAAATGTTAGTGTTAC...CTGTTGAGTTATTGGTAATCTCTTGCTAGGACTGAATCTCAGTACTTCAGAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCAGTGACTCGAGCAAGTTaGTCTGTAACTGTAAGTGTA +
Preference number: 5 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSVTRAS*SVTVSV
Trigger: TACACTTACAGTTACAGACAAACTTGCTCGAGTCAC...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGTTGCTTGGTTTACTTTaGCTCAACCTTTCTGAATCT +
Preference number: 5 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVLLGLL*LNLSES
Trigger: AGATTCAGAAAGGTTGAGCAAAAGTAAACCAAGCAA...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp AAACTAGTGATTCAAAGACATCAGGAACACACAGGGTCACATCTGATGAAAGTGCAACTAACATTGTATTaGTTTCTTCCTGTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: KLVIQRHQEHTGSHLMKVQLTLY*FLPVSP
Trigger: AGGAGACACAGGAAGAAACAAATACAATGTTAGTTG...CACTTTCATCAGATGTGACCCTGTGTGTTCCTGATGTCTTTGAATCACTAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS GCA 90 bp AGAAAGAAACAGAAAGACAACTTAGTGACACCATTTAAGGAAGAATaGAGTTTTCGTGATCCAAGAAATTGTAGTGACCCAGGTTTGAAG +
Preference number: 5 (lower is better)
Translates to: RKKQKDNLVTPFKEE*SFRDPRNCSDPGLK
Trigger: CTTCAAACCTGGGTCACTACAATTTCTTGGATCACGAAAACTGCATTCTTCCTTAAATGGTGTCACTAAGTTGTCTTTCTGTTTCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556663.5
CDS GCA 90 bp CCAAACTGCAGTCTCTCACATACCACCTTCATGACTTTCCTTATCTaGCTACAACCTGTACTACTGTTTACTTATTATTTTTCCTCATAT +
Preference number: 5 (lower is better)
Translates to: PNCSLSHTTFMTFLI*LQPVLLFTYYFSSY
Trigger: ATATGAGGAAAAATAATAAGTAAACAGTAGTACAGGTTGTAGGCAGATAAGGAAAGTCATGAAGGTGGTATGTGAGAGACTGCAGTTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554125.5
CDS-3UTR CAA 90 bp ATTTGCTGTACACCTAAACCATCTTCTCCATTATACCAATCTGTGTGTGTGTGTTCTTTCCTTCCTGTTTaGCTTAGGAAAGTCCTATTT +
Preference number: 5 (lower is better)
Translates to: ICCTPKPSSPLYQSVCVCSFLPV*LRKVLF
Trigger: AAATAGGACTTTCCTAAGCAAAACAGGAAGGAAAGA...ACACACACACACAGATTGGTATAATGGAGAAGATGGTTTAGGTGTACAGCAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CAA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCATTGAGGCCCCAAAACTaGGTTGATTTATCTTATTGG +
Preference number: 5 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSLRPQN*VDLSYW
Trigger: CCAATAAGATAAATCAACCAAGTTTTGGGGCCTCAA...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CAA 90 bp AAAACTTGGTTGATTTATCTTATTGGCACTCTGCATGAATCAAGAGTAGGCTCATTTGATGTTCATCTTTaGGAGACGTTAACACAGGAG +
Preference number: 5 (lower is better)
Translates to: KTWLIYLIGTLHESRVGSFDVHL*ETLTQE
Trigger: CTCCTGTGTTAACGTCTCCAAAAGATGAACATCAAA...TGAGCCTACTCTTGATTCATGCAGAGTGCCAATAAGATAAATCAACCAAGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp TTGGAACTTCCTCAAATGATATTAAAAGCTCTACACAAAAGGTATGCAGAAGCAGATAATACCTTCTTATaGCCACAGGTTTGCAAGATC +
Preference number: 5 (lower is better)
Translates to: LELPQMILKALHKRYAEADNTFL*PQVCKI
Trigger: GATCTTGCAAACCTGTGGCAATAAGAAGGTATTATC...TGCTTCTGCATACCTTTTGTGTAGAGCTTTTAATATCATTTGAGGAAGTTCCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS-3UTR CAA 90 bp TTGGAACTTCCTCAAATGATATTAAAAGCTCTACACAAAAGGTATGCAGAAGCAGAACTGGCTACAAATTaGGAACTTCCTCAAATGATA +
Preference number: 5 (lower is better)
Translates to: LELPQMILKALHKRYAEAELATN*ELPQMI
Trigger: TATCATTTGAGGAAGTTCCAAATTTGTAGCCAGTTC...TGCTTCTGCATACCTTTTGTGTAGAGCTTTTAATATCATTTGAGGAAGTTCCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000621494.1
CDS-3UTR CAA 90 bp TTGGAACTTCCTCAAATGATATTAAAAGCTCTACACAAAAGGTATGCAGAAGCACACCTACCCCATATTTaGAATCAGAAACTAGTGATT +
Preference number: 5 (lower is better)
Translates to: LELPQMILKALHKRYAEAHLPHI*NQKLVI
Trigger: AATCACTAGTTTCTGATTCAAAATATGGGGTAGGTG...TGCTTCTGCATACCTTTTGTGTAGAGCTTTTAATATCATTTGAGGAAGTTCCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000621494.1
CDS CAA 72 bp GCAGCTGCCGCAGCCACCTCCAACGGCCGCCGCTTTTaGGGCCGACTCTCACCGCCGGGGCTTCCCTCTCTG +
Preference number: 6 (lower is better)
Translates to: AAAAATSNGRRF*GRLSPPGLPSL
Trigger: CAGAGAGGGAAGCCCCGGCGGTGAGAGTCGGCCCAAAAAGCGGCGGCCGTTGGAGGTGGCTGCGGCAGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557542.5
CDS CAA 72 bp TCAGCTGCCGCAGCCACCTCCAACGGCCGCCGCTTTTaGGGCCGACTCTCACCGCCGGGGCTTCCCTCTCTG +
Preference number: 6 (lower is better)
Translates to: SAAAATSNGRRF*GRLSPPGLPSL
Trigger: CAGAGAGGGAAGCCCCGGCGGTGAGAGTCGGCCCAAAAAGCGGCGGCCGTTGGAGGTGGCTGCGGCAGCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554375.5
ENST00000556109.1
CDS GCA 72 bp CGCTTCCGACCTCGGCGTTTCCGAAGCTGCCGCCTCTaGTGTCGGGGGCTCAGCGCCATCTCCTCCCACAGT +
Preference number: 6 (lower is better)
Translates to: RFRPRRFRSCRL*CRGLSAISSHS
Trigger: ACTGTGGGAGGAGATGGCGCTGAGCCCCCGACAGCAGAGGCGGCAGCTTCGGAAACGCCGAGGTCGGAAGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554125.5
ENST00000554375.5
ENST00000556109.1
ENST00000556663.5
ENST00000557263.5
ENST00000557542.5
ENST00000621494.1
CDS GCA 72 bp TCAGAACGACGCTTCCGACCTCGGCGTTTCCGAAGCTaGCGCCTCTGCTGTCGGGGGCTCAGCGCCATCTCC +
Preference number: 6 (lower is better)
Translates to: SERRFRPRRFRS*RLCCRGLSAIS
Trigger: GGAGATGGCGCTGAGCCCCCGACAGCAGAGGCGGCAGCTTCGGAAACGCCGAGGTCGGAAGCGTCGTTCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554125.5
ENST00000554375.5
ENST00000556109.1
ENST00000556663.5
ENST00000557263.5
ENST00000557542.5
ENST00000621494.1
CDS GCA 72 bp GGCCGCACAGCAGGAGGTGAGCTGTCAGCAAGCAGCTaGTCCCCATCGTGGGCATTACCGCCTGAGCTCTAC +
Preference number: 6 (lower is better)
Translates to: GRTAGGELSASS*SPSWALPPELY
Trigger: GTAGAGCTCAGGCGGTAATGCCCACGATGGGGAGCAGCTGCTTGCTGACAGCTCACCTCCTGCTGTGCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554125.5
CDS GCA 72 bp AAAAGAACCCTAGAACTCCCCATCTCCAGTCGCGGATaGACACTCTCGAGAGGACCCGGCGGCCAGGCACGC +
Preference number: 6 (lower is better)
Translates to: KRTLELPISSRG*TLSRGPGGQAR
Trigger: GCGTGCCTGGCCGCCGGGTCCTCTCGAGAGTGTGCATCCGCGACTGGAGATGGGGAGTTCTAGGGTTCTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557207.1
CDS CCA 72 bp AGGGTGGCCAGAGCTGTCTTGTCAGGGCACTCTCGCTaGAATACAGGCCTCCGAGTGTTGTCTCAGGGCAGG +
Preference number: 6 (lower is better)
Translates to: RVARAVLSGHSR*NTGLRVLSQGR
Trigger: CCTGCCCTGAGACAACACTCGGAGGCCTGTATTCCAGCGAGAGTGCCCTGACAAGACAGCTCTGGCCACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556372.2
ENST00000556675.2
CDS TCA 72 bp CCTCGCTGTAGCAGCAGGTATGCTCTGCCAGGTGAGTaGAGTCAGAACGACGCTTCCGACCTCGGCGTTTCC +
Preference number: 6 (lower is better)
Translates to: PRCSSRYALPGE*SQNDASDLGVS
Trigger: GGAAACGCCGAGGTCGGAAGCGTCGTTCTGACTTCACTCACCTGGCAGAGCATACCTGCTGCTACAGCGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554125.5
ENST00000554375.5
ENST00000556109.1
ENST00000556663.5
ENST00000557263.5
ENST00000557542.5
ENST00000621494.1
CDS TCA 72 bp CACCTTCAGCTTCTGCTGAAGGCTAGCAGCCACCTCTaGTGTCACTCGCTTCACCTTCCGCCTGCGCCTGAG +
Preference number: 6 (lower is better)
Translates to: HLQLLLKASSHL*CHSLHLPPAPE
Trigger: CTCAGGCGCAGGCGGAAGGTGAAGCGAGTGACATCAGAGGTGGCTGCTAGCCTTCAGCAGAAGCTGAAGGTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554125.5
ENST00000554375.5
ENST00000556663.5
ENST00000557263.5
ENST00000621494.1
CDS TCA 72 bp CACTTCTCGACAGTCCTTAGTGGCCTCATCCAGACTTaGCTCAGAGGCCTCGCTGTAGCAGCAGGTATGCTC +
Preference number: 6 (lower is better)
Translates to: HFSTVLSGLIQT*LRGLAVAAGML
Trigger: GAGCATACCTGCTGCTACAGCGAGGCCTCTGAGTCAAGTCTGGATGAGGCCACTAAGGACTGTCGAGAAGTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554125.5
ENST00000554375.5
ENST00000556109.1
ENST00000556663.5
ENST00000557263.5
ENST00000557542.5
ENST00000621494.1
CDS TCA 72 bp AGCAAGCAGCTGCTCCCCATCGTGGGCATTACCGCCTaGGCTCTACCTCCTGTCAGATCAACAGCCACATTA +
Preference number: 6 (lower is better)
Translates to: SKQLLPIVGITA*ALPPVRSTATL
Trigger: TAATGTGGCTGTTGATCTGACAGGAGGTAGAGCTCAGGCGGTAATGCCCACGATGGGGAGCAGCTGCTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554125.5
CDS GCA 72 bp TGTCCTTCTACCACCTGCACTGGGGCTAGACAAAGATaGTGTGGCCACTGGTTTCCGCTTCCTCTTGATGTC +
Preference number: 6 (lower is better)
Translates to: CPSTTCTGARQR*CGHWFPLPLDV
Trigger: GACATCAAGAGGAAGCGGAAACCAGTGGCCACAGCATCTTTGTCTAGCCCCAGTGCAGGTGGTAGAAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556372.2
ENST00000556675.2
CDS GCA 72 bp GGTTTCACCAGCTGCTATCCAGGTGACAGCTCGGGCTaGAGTCTCATCAGAGGCTCAACTGAGGAAAGATCT +
Preference number: 6 (lower is better)
Translates to: GFTSCYPGDSSG*SLIRGSTEERS
Trigger: AGATCTTTCCTCAGTTGAGCCTCTGATGAGACTGCAGCCCGAGCTGTCACCTGGATAGCAGCTGGTGAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556675.2
CDS CCA 72 bp GGTCCAGGGAGTATTCTCCTTCCGCCTGCGCCTGAGTaGTCGACAAGGTGCATTTTCAGTAAAGGAGTCAGA +
Preference number: 6 (lower is better)
Translates to: GPGSILLPPAPE*STRCIFSKGVR
Trigger: TCTGACTCCTTTACTGAAAATGCACCTTGTCGACCACTCAGGCGCAGGCGGAAGGAGAATACTCCCTGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556109.1
CDS TCA 72 bp AGACTTGAACCTGCAGCCTCTCTCATAGCTCCAATCTaGCACCTTCAGCTTCTGCTGAAGGCTAGCAGCCAC +
Preference number: 6 (lower is better)
Translates to: RLEPAASLIAPI*HLQLLLKASSH
Trigger: GTGGCTGCTAGCCTTCAGCAGAAGCTGAAGGTGTCAGATTGGAGCTATGAGAGAGGCTGCAGGTTCAAGTCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554125.5
ENST00000554375.5
ENST00000556663.5
ENST00000557263.5
ENST00000621494.1
CDS GCA 72 bp CTGCATGTAATCACCTGCACTGGGGCTAGACAAAGATaGTGTGGCCACTGGTTTCCGCTTCCTCTTGATGTC +
Preference number: 6 (lower is better)
Translates to: LHVITCTGARQR*CGHWFPLPLDV
Trigger: GACATCAAGAGGAAGCGGAAACCAGTGGCCACAGCATCTTTGTCTAGCCCCAGTGCAGGTGATTACATGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553588.1
ENST00000554799.1
CDS CAA 90 bp GCTGGGTGTCGTTTGGCTACCATTGTGTCATCAGAGTCACTAAAATaGGTCACCGGAGCCACTTCTCGACAGTCCTTAGTGGCCTCATCC +
Preference number: 6 (lower is better)
Translates to: AGCRLATIVSSESLK*VTGATSRQSLVASS
Trigger: GGATGAGGCCACTAAGGACTGTCGAGAAGTGGCTCCGGTGACCAATTTTAGTGACTCTGATGACACAATGGTAGCCAAACGACACCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554125.5
ENST00000554375.5
ENST00000556109.1
ENST00000556663.5
ENST00000557263.5
ENST00000557542.5
ENST00000621494.1
CDS CAA 90 bp TTTCTGCAGGTCAGAAGTTTACACACAGGTTGGCTGGTTTCTCTGTaGAAGGGTTTCACCAGCTGCTATCCAGGTGACAGCTCGGGCTGC +
Preference number: 6 (lower is better)
Translates to: FLQVRSLHTGWLVSL*KGFTSCYPGDSSGC
Trigger: GCAGCCCGAGCTGTCACCTGGATAGCAGCTGGTGAAACCCTTCAACAGAGAAACCAGCCAACCTGTGTGTAAACTTCTGACCTGCAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556675.2
CDS TCA 72 bp GAGAATTGCTTGAACCTGGAAGGCAGGAAGTTACAGTaGGCCGAGATCGCACCATTGCATTCCAGCCTAGGT +
Preference number: 6 (lower is better)
Translates to: ENCLNLEGRKLQ*AEIAPLHSSLG
Trigger: ACCTAGGCTGGAATGCAATGGTGCGATCTCGGCTCACTGTAACTTCCTGCCTTCCAGGTTCAAGCAATTCTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554125.5
CDS GCA 72 bp TCCCACAGTTCACCAAGCTTATTCTGCTCAGATGTCTaGTCCAAGGCTGAGGCTAAGTCGTGTACCAGCTCA +
Preference number: 6 (lower is better)
Translates to: SHSSPSLFCSDV*SKAEAKSCTSS
Trigger: TGAGCTGGTACACGACTTAGCCTCAGCCTTGGAGCAGACATCTGAGCAGAATAAGCTTGGTGAACTGTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554125.5
ENST00000554375.5
ENST00000556109.1
ENST00000556663.5
ENST00000557263.5
ENST00000557542.5
ENST00000621494.1
CDS GCA 72 bp CTTCACCTTCCGCCTGCGCCTGAGTGGTCGACAAGGTaGATTTTCAGTAAAGGAGTCAGATTCATGCCAAGA +
Preference number: 6 (lower is better)
Translates to: LHLPPAPEWSTR*IFSKGVRFMPR
Trigger: TCTTGGCATGAATCTGACTCCTTTACTGAAAATGCACCTTGTCGACCACTCAGGCGCAGGCGGAAGGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554125.5
ENST00000554375.5
ENST00000556663.5
ENST00000557263.5
ENST00000621494.1
CDS CAA 90 bp AGGTTGTGCACACCTTATGAAAGCCTAATGCCTGATGATCTGTCATaGTTTCCCATCACCCCCAGGTGGGACTGTGTAGTTGCAGGAGCA +
Preference number: 6 (lower is better)
Translates to: RLCTPYESLMPDDLS*FPITPRWDCVVAGA
Trigger: TGCTCCTGCAACTACACAGTCCCACCTGGGGGTGATGGGAAACAATGACAGATCATCAGGCATTAGGCTTTCATAAGGTGTGCACAACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554125.5
CDS GCA 72 bp ATTCTCCTTCCGCCTGCGCCTGAGTGGTCGACAAGGTaGATTTTCAGTAAAGGAGTCAGATTCATGCCAAGA +
Preference number: 6 (lower is better)
Translates to: ILLPPAPEWSTR*IFSKGVRFMPR
Trigger: TCTTGGCATGAATCTGACTCCTTTACTGAAAATGCACCTTGTCGACCACTCAGGCGCAGGCGGAAGGAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556109.1
CDS GCA 72 bp TCGTCATTTGCAAATAACGGATCTGGATCAGGTGACTaGCACAGGTCCCCTTCTGCCTTTGGATCCTCTGAT +
Preference number: 6 (lower is better)
Translates to: SSFANNGSGSGD*HRSPSAFGSSD
Trigger: ATCAGAGGATCCAAAGGCAGAAGGGGACCTGTGGCAGTCACCTGATCCAGATCCGTTATTTGCAAATGACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554125.5
CDS CCA 72 bp AGGAAAGTCCTATTTTCTGCTGATTCACACAATCCGTaGCCTGATGAGGTCCAGGGAGTATTCTCCTTCCGC +
Preference number: 6 (lower is better)
Translates to: RKVLFSADSHNP*PDEVQGVFSFR
Trigger: GCGGAAGGAGAATACTCCCTGGACCTCATCAGGCCACGGATTGTGTGAATCAGCAGAAAATAGGACTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556109.1
CDS CCA 72 bp CCTGATGATCTGTCATTGTTTCCCATCACCCCCAGGTaGGACTGTGTAGTTGCAGGAGCACAAGCTACATTA +
Preference number: 6 (lower is better)
Translates to: PDDLSLFPITPR*DCVVAGAQATL
Trigger: TAATGTAGCTTGTGCTCCTGCAACTACACAGTCCCACCTGGGGGTGATGGGAAACAATGACAGATCATCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554125.5
CDS CAA 72 bp TCACTCTGTTCGTCATCACCTTGTCGCCCTTCATCATaGGTAAAGAGCCCAGTGTCACTGCTGCTACACACA +
Preference number: 6 (lower is better)
Translates to: SLCSSSPCRPSS*VKSPVSLLLHT
Trigger: TGTGTGTAGCAGCAGTGACACTGGGCTCTTTACCAATGATGAAGGGCGACAAGGTGATGACGAACAGAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554125.5
ENST00000554375.5
ENST00000556663.5
ENST00000557263.5
ENST00000621494.1
CDS CAA 72 bp GTCAGAAGTTTACACACAGGTTGGCTGGTTTCTCTGTaGAAGGGTTTCACCAGCTGCTATCCAGGTGACAGC +
Preference number: 6 (lower is better)
Translates to: VRSLHTGWLVSL*KGFTSCYPGDS
Trigger: GCTGTCACCTGGATAGCAGCTGGTGAAACCCTTCAACAGAGAAACCAGCCAACCTGTGTGTAAACTTCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556675.2
CDS TCA 72 bp TCAGAAGTTTACACACAGGTTGGCTGGTTTCTCTGTTaGAGGGTTTCACCAGCTGCTATCCAGGTGACAGCT +
Preference number: 6 (lower is better)
Translates to: SEVYTQVGWFLC*RVSPAAIQVTA
Trigger: AGCTGTCACCTGGATAGCAGCTGGTGAAACCCTTCAACAGAGAAACCAGCCAACCTGTGTGTAAACTTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556675.2
CDS GCA 72 bp GAAGCTTGTTCCAAAGGTCCCACCGAGAATTCATTCTaGAAATACAGGAGCTACTCATCACCCCCAAGCAAG +
Preference number: 6 (lower is better)
Translates to: EACSKGPTENSF*KYRSYSSPPSK
Trigger: CTTGCTTGGGGGTGATGAGTAGCTCCTGTATTTGCAGAATGAATTCTCGGTGGGACCTTTGGAACAAGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556675.2
CDS GCA 72 bp ATCCCCTTAAGGGAAGCCAGACTGTGGCACATATTGTaGCACCTAGCAGGCATTCTAAATGCTTACCAAGTG +
Preference number: 6 (lower is better)
Translates to: IPLREARLWHIL*HLAGILNAYQV
Trigger: CACTTGGTAAGCATTTAGAATGCCTGCTAGGTGGCACAATATGTGCCACAGTCTGGCTTCCCTTAAGGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554125.5
CDS CCA 72 bp AGGAAAGTCCTATTTTCTGCTGATTCACACAATCCGTaGCCTGATGAGGTCCAGGGAGTATTCTCCTTCCAG +
Preference number: 6 (lower is better)
Translates to: RKVLFSADSHNP*PDEVQGVFSFQ
Trigger: CTGGAAGGAGAATACTCCCTGGACCTCATCAGGCCACGGATTGTGTGAATCAGCAGAAAATAGGACTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554125.5
ENST00000554375.5
ENST00000556663.5
ENST00000557263.5
ENST00000621494.1
CDS CAA 72 bp CGTTTGGCTACCATTGTGTCATCAGAGTCACTAAAATaGGTCACCGGAGCCACTTCTCGACAGTCCTTAGTG +
Preference number: 6 (lower is better)
Translates to: RLATIVSSESLK*VTGATSRQSLV
Trigger: CACTAAGGACTGTCGAGAAGTGGCTCCGGTGACCAATTTTAGTGACTCTGATGACACAATGGTAGCCAAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554125.5
ENST00000554375.5
ENST00000556109.1
ENST00000556663.5
ENST00000557263.5
ENST00000557542.5
ENST00000621494.1
CDS CAA 90 bp GCAGAACAGCACAAACTTGAACATGGAACGAAGTCATCAAACAACTaGCAGTCGAATGCCTGTGCAGAATCCTTTCCTGCCTCAAAGCCT +
Preference number: 6 (lower is better)
Translates to: AEQHKLEHGTKSSNN*QSNACAESFPASKP
Trigger: AGGCTTTGAGGCAGGAAAGGATTCTGCACAGGCATTCGACTGCAAGTTGTTTGATGACTTCGTTCCATGTTCAAGTTTGTGCTGTTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557207.1
CDS CAA 90 bp CACTCTTTATCTACAGTTTCTGCAGGTCAGAAGTTTACACACAGGTaGGCTGGTTTCTCTGTTGAAGGGTTTCACCAGCTGCTATCCAGG +
Preference number: 6 (lower is better)
Translates to: HSLSTVSAGQKFTHR*AGFSVEGFHQLLSR
Trigger: CCTGGATAGCAGCTGGTGAAACCCTTCAACAGAGAAACCAGCCAACCTGTGTGTAAACTTCTGACCTGCAGAAACTGTAGATAAAGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556675.2
CDS CAA 72 bp TCTACAGTTTCTGCAGGTCAGAAGTTTACACACAGGTaGGCTGGTTTCTCTGTTGAAGGGTTTCACCAGCTG +
Preference number: 6 (lower is better)
Translates to: STVSAGQKFTHR*AGFSVEGFHQL
Trigger: CAGCTGGTGAAACCCTTCAACAGAGAAACCAGCCAACCTGTGTGTAAACTTCTGACCTGCAGAAACTGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556675.2
CDS CAA 72 bp GGCCAACACACCAAGCTTCCTAGAGAGCTACGTGATTaGATTATAGTTCCAACAGCCTTCATCCTGGGACAT +
Preference number: 6 (lower is better)
Translates to: GQHTKLPRELRD*IIVPTAFILGH
Trigger: ATGTCCCAGGATGAAGGCTGTTGGAACTATAATCAAATCACGTAGCTCTCTAGGAAGCTTGGTGTGTTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554125.5
CDS CAA 72 bp ACACCTTATGAAAGCCTAATGCCTGATGATCTGTCATaGTTTCCCATCACCCCCAGGTGGGACTGTGTAGTT +
Preference number: 6 (lower is better)
Translates to: TPYESLMPDDLS*FPITPRWDCVV
Trigger: AACTACACAGTCCCACCTGGGGGTGATGGGAAACAATGACAGATCATCAGGCATTAGGCTTTCATAAGGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554125.5
CDS CAA 90 bp GAATGTTGCTTACTCTTGACAATGGCATTGAGAGCTGGGTGTCGTTaGGCTACCATTGTGTCATCAGAGTCACTAAAATTGGTCACCGGA +
Preference number: 6 (lower is better)
Translates to: ECCLLLTMALRAGCR*ATIVSSESLKLVTG
Trigger: TCCGGTGACCAATTTTAGTGACTCTGATGACACAATGGTAGCCAAACGACACCCAGCTCTCAATGCCATTGTCAAGAGTAAGCAACATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554125.5
ENST00000554375.5
ENST00000556109.1
ENST00000556663.5
ENST00000557263.5
ENST00000621494.1
CDS CAA 90 bp GAGTCAGATTCATGCCAAGAATGTTGCTTACTCTTGACAATGGCATaGAGAGCTGGGTGTCGTTTGGCTACCATTGTGTCATCAGAGTCA +
Preference number: 6 (lower is better)
Translates to: ESDSCQECCLLLTMA*RAGCRLATIVSSES
Trigger: TGACTCTGATGACACAATGGTAGCCAAACGACACCCAGCTCTCAATGCCATTGTCAAGAGTAAGCAACATTCTTGGCATGAATCTGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554125.5
ENST00000554375.5
ENST00000556109.1
ENST00000556663.5
ENST00000557263.5
ENST00000621494.1
CDS CAA 90 bp CTAGAGTTGTGGAAACACAGAGTAGCACATGGTCTCATCGAGGTATaGAGAATGAATGAAAAACTGTTCTTTGGCCTGGGGTCACTGCTG +
Preference number: 6 (lower is better)
Translates to: LELWKHRVAHGLIEV*RMNEKLFFGLGSLL
Trigger: CAGCAGTGACCCCAGGCCAAAGAACAGTTTTTCATTCATTCTCAATACCTCGATGAGACCATGTGCTACTCTGTGTTTCCACAACTCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556663.5
CDS TCA 72 bp AGTAGCACATGGTCTCATCGAGGTATTGAGAATGAATaGAAAACTGTTCTTTGGCCTGGGGTCACTGCTGAC +
Preference number: 6 (lower is better)
Translates to: SSTWSHRGIENE*KTVLWPGVTAD
Trigger: GTCAGCAGTGACCCCAGGCCAAAGAACAGTTTTTCATTCATTCTCAATACCTCGATGAGACCATGTGCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556663.5
CDS TCA 72 bp TTGTTGGCAGAATTTATTTCCTTGTGGCTGTCAGACTaGGGGTTTCAGTTTCTTGCTGGAGTCTACCCTCAG +
Preference number: 6 (lower is better)
Translates to: LLAEFISLWLSD*GFQFLAGVYPQ
Trigger: CTGAGGGTAGACTCCAGCAAGAAACTGAAACCCTCAGTCTGACAGCCACAAGGAAATAAATTCTGCCAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556675.2
CDS TCA 72 bp CTCCCTTCCTTATTCTTTGCCCACCACCATCTTCTCTaGCTGAGGATGAGCCCTGTCTTAATTTATTCCTCA +
Preference number: 6 (lower is better)
Translates to: LPSLFFAHHHLL*LRMSPVLIYSS
Trigger: TGAGGAATAAATTAAGACAGGGCTCATCCTCAGTCAGAGAAGATGGTGGTGGGCAAAGAATAAGGAAGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554125.5
CDS TCA 72 bp GTAACTGTTGTGTTGAGAGAACACAAGTCACGGGCGTaGATGCCAAGAACATCAAGGCTGTTCTTCAAACAC +
Preference number: 6 (lower is better)
Translates to: VTVVLREHKSRA*MPRTSRLFFKH
Trigger: GTGTTTGAAGAACAGCCTTGATGTTCTTGGCATTCACGCCCGTGACTTGTGTTCTCTCAACACAACAGTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554125.5
CDS GCA 72 bp TTCGAACCTAAGTTTTCCTCATCTGCTGAAGGTGCTTaGCCTTGTAGGTTGCTGGAAGGATTAAATGAGCTG +
Preference number: 6 (lower is better)
Translates to: FEPKFSSSAEGA*PCRLLEGLNEL
Trigger: CAGCTCATTTAATCCTTCCAGCAACCTACAAGGGCAAGCACCTTCAGCAGATGAGGAAAACTTAGGTTCGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554125.5
CDS CCA 72 bp AGAATGTTGCTTACTCTTGACAATGGCATTGAGAGCTaGGTGTCGTTTGGCTACCATTGTGTCATCAGAGTC +
Preference number: 6 (lower is better)
Translates to: RMLLTLDNGIES*VSFGYHCVIRV
Trigger: GACTCTGATGACACAATGGTAGCCAAACGACACCCAGCTCTCAATGCCATTGTCAAGAGTAAGCAACATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554125.5
ENST00000554375.5
ENST00000556109.1
ENST00000556663.5
ENST00000557263.5
ENST00000621494.1
CDS CAA 72 bp TCATGCCAAGAATGTTGCTTACTCTTGACAATGGCATaGAGAGCTGGGTGTCGTTTGGCTACCATTGTGTCA +
Preference number: 6 (lower is better)
Translates to: SCQECCLLLTMA*RAGCRLATIVS
Trigger: TGACACAATGGTAGCCAAACGACACCCAGCTCTCAATGCCATTGTCAAGAGTAAGCAACATTCTTGGCATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554125.5
ENST00000554375.5
ENST00000556109.1
ENST00000556663.5
ENST00000557263.5
ENST00000621494.1
CDS CAA 72 bp AAGGAGTCAGATTCATGCCAAGAATGTTGCTTACTCTaGACAATGGCATTGAGAGCTGGGTGTCGTTTGGCT +
Preference number: 6 (lower is better)
Translates to: KESDSCQECCLL*TMALRAGCRLA
Trigger: AGCCAAACGACACCCAGCTCTCAATGCCATTGTCAAGAGTAAGCAACATTCTTGGCATGAATCTGACTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554125.5
ENST00000554375.5
ENST00000556109.1
ENST00000556663.5
ENST00000557263.5
ENST00000621494.1
CDS CAA 72 bp CACAAACTTGAACATGGAACGAAGTCATCAAACAACTaGCAGTCGAATGCCTGTGCAGAATCCTTTCCTGCC +
Preference number: 6 (lower is better)
Translates to: HKLEHGTKSSNN*QSNACAESFPA
Trigger: GGCAGGAAAGGATTCTGCACAGGCATTCGACTGCAAGTTGTTTGATGACTTCGTTCCATGTTCAAGTTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557207.1
CDS CAA 90 bp TTGCCACTTGGGCTTCTCCAATATGGCCATTTATTTCATGGAAGCTaGTTCCAAAGGTCCCACCGAGAATTCATTCTGCAAATACAGGAG +
Preference number: 6 (lower is better)
Translates to: LPLGLLQYGHLFHGS*FQRSHREFILQIQE
Trigger: CTCCTGTATTTGCAGAATGAATTCTCGGTGGGACCTTTGGAACAAGCTTCCATGAAATAAATGGCCATATTGGAGAAGCCCAAGTGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556675.2
CDS GCA 72 bp ACAAACTTGAACATGGAACGAAGTCATCAAACAACTTaGAGTCGAATGCCTGTGCAGAATCCTTTCCTGCCT +
Preference number: 6 (lower is better)
Translates to: TNLNMERSHQTT*SRMPVQNPFLP
Trigger: AGGCAGGAAAGGATTCTGCACAGGCATTCGACTGCAAGTTGTTTGATGACTTCGTTCCATGTTCAAGTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557207.1
CDS CCA 72 bp AACCAGAAATCTTTCTGCCGAGGGTCACTAATGATATaGCTTATCCTCTCAGTCCCCAAAGTGTTTATGCTG +
Preference number: 6 (lower is better)
Translates to: NQKSFCRGSLMI*LILSVPKVFML
Trigger: CAGCATAAACACTTTGGGGACTGAGAGGATAAGCCATATCATTAGTGACCCTCGGCAGAAAGATTTCTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312858.9
ENST00000554125.5
ENST00000554375.5
ENST00000621494.1
CDS CAA 72 bp TGGAAACACAGAGTAGCACATGGTCTCATCGAGGTATaGAGAATGAATGAAAAACTGTTCTTTGGCCTGGGG +
Preference number: 6 (lower is better)
Translates to: WKHRVAHGLIEV*RMNEKLFFGLG
Trigger: CCCCAGGCCAAAGAACAGTTTTTCATTCATTCTCAATACCTCGATGAGACCATGTGCTACTCTGTGTTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556663.5
CDS CAA 72 bp TCAACTGAGGAAAGATCTGCTCCAAGCTTCTTCAGGTaGTTGGCAGAATTTATTTCCTTGTGGCTGTCAGAC +
Preference number: 6 (lower is better)
Translates to: STEERSAPSFFR*LAEFISLWLSD
Trigger: GTCTGACAGCCACAAGGAAATAAATTCTGCCAACAACCTGAAGAAGCTTGGAGCAGATCTTTCCTCAGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556675.2
CDS CAA 90 bp TTTTCAGTAAAGGAGTCAGATTCATGCCAAGAATGTTGCTTACTCTaGACAATGGCATTGAGAGCTGGGTGTCGTTTGGCTACCATTGTG +
Preference number: 6 (lower is better)
Translates to: FSVKESDSCQECCLL*TMALRAGCRLATIV
Trigger: CACAATGGTAGCCAAACGACACCCAGCTCTCAATGCCATTGTCAAGAGTAAGCAACATTCTTGGCATGAATCTGACTCCTTTACTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554125.5
ENST00000554375.5
ENST00000556109.1
ENST00000556663.5
ENST00000557263.5
ENST00000621494.1
CDS CAA 90 bp ACGGGCGTGAATGCCAAGAACATCAAGGCTGTTCTTCAAACACATTaGTGTCTATATTCATCTATGTGTGTGGACCGTGCTAAACATCAG +
Preference number: 6 (lower is better)
Translates to: TGVNAKNIKAVLQTH*CLYSSMCVDRAKHQ
Trigger: CTGATGTTTAGCACGGTCCACACACATAGATGAATATAGACACAAATGTGTTTGAAGAACAGCCTTGATGTTCTTGGCATTCACGCCCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554125.5
CDS CAA 72 bp TTACTCTTGACAATGGCATTGAGAGCTGGGTGTCGTTaGGCTACCATTGTGTCATCAGAGTCACTAAAATTG +
Preference number: 6 (lower is better)
Translates to: LLLTMALRAGCR*ATIVSSESLKL
Trigger: CAATTTTAGTGACTCTGATGACACAATGGTAGCCAAACGACACCCAGCTCTCAATGCCATTGTCAAGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554125.5
ENST00000554375.5
ENST00000556109.1
ENST00000556663.5
ENST00000557263.5
ENST00000621494.1
CDS CAA 90 bp TTTTTAACAGGCCAACACACCAAGCTTCCTAGAGAGCTACGTGATTaGATTATAGTTCCAACAGCCTTCATCCTGGGACATTACCAAATC +
Preference number: 6 (lower is better)
Translates to: FLTGQHTKLPRELRD*IIVPTAFILGHYQI
Trigger: GATTTGGTAATGTCCCAGGATGAAGGCTGTTGGAACTATAATCAAATCACGTAGCTCTCTAGGAAGCTTGGTGTGTTGGCCTGTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554125.5
CDS GCA 72 bp TTTTCAGTAAAGGAGTCAGATTCATGCCAAGAATGTTaGTTACTCTTGACAATGGCATTGAGAGCTGGGTGT +
Preference number: 6 (lower is better)
Translates to: FSVKESDSCQEC*LLLTMALRAGC
Trigger: ACACCCAGCTCTCAATGCCATTGTCAAGAGTAAGCAACATTCTTGGCATGAATCTGACTCCTTTACTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261530.12
ENST00000312858.9
ENST00000554125.5
ENST00000554375.5
ENST00000556109.1
ENST00000556663.5
ENST00000557263.5
ENST00000621494.1
CDS CCA 72 bp TTATTCTTTTCTTTCTGCCGAGGGTCACTAATGATATaGCTTATCCTCTCAGTCCCCAAAGTGTTTATGCTG +
Preference number: 6 (lower is better)
Translates to: LFFSFCRGSLMI*LILSVPKVFML
Trigger: CAGCATAAACACTTTGGGGACTGAGAGGATAAGCCATATCATTAGTGACCCTCGGCAGAAAGAAAAGAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261530.12
ENST00000554799.1
CDS TCA 72 bp GAACAAATAAAAACCTCAGGCAGAACAGCACAAACTTaGACATGGAACGAAGTCATCAAACAACTTGCAGTC +
Preference number: 6 (lower is better)
Translates to: EQIKTSGRTAQT*TWNEVIKQLAV
Trigger: GACTGCAAGTTGTTTGATGACTTCGTTCCATGTTCAAGTTTGTGCTGTTCTGCCTGAGGTTTTTATTTGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557207.1
CDS TCA 72 bp AGAGGAAACCTTACCTCATGTGCACAAGCAGAAATGTaGGGAAAATCAGAAGCCAACGCTTTATTCTTTCTA +
Preference number: 6 (lower is better)
Translates to: RGNLTSCAQAEM*GKSEANALFFL
Trigger: TAGAAAGAATAAAGCGTTGGCTTCTGATTTTCCTCACATTTCTGCTTGTGCACATGAGGTAAGGTTTCCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554125.5
CDS TCA 72 bp TCTGCAAAACATCTATTTGACTTCAAAAGGTGGCTGTaGGGATCAAAGGAGATCCCTCACTTTATGTTTGCT +
Preference number: 6 (lower is better)
Translates to: SAKHLFDFKRWL*GSKEIPHFMFA
Trigger: AGCAAACATAAAGTGAGGGATCTCCTTTGATCCTCACAGCCACCTTTTGAAGTCAAATAGATGTTTTGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554125.5
CDS GCA 72 bp CCACCACTCCTGGCCTACTGTATTCATTTTCTATGCTaGTTAACTACCACAAACTTAGCAGTTCTAAATAAC +
Preference number: 6 (lower is better)
Translates to: PPLLAYCIHFLC*LTTTNLAVLNN
Trigger: GTTATTTAGAACTGCTAAGTTTGTGGTAGTTAAGCAGCATAGAAAATGAATACAGTAGGCCAGGAGTGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556675.2
CDS CAA 72 bp AATGCCAAGAACATCAAGGCTGTTCTTCAAACACATTaGTGTCTATATTCATCTATGTGTGTGGACCGTGCT +
Preference number: 6 (lower is better)
Translates to: NAKNIKAVLQTH*CLYSSMCVDRA
Trigger: AGCACGGTCCACACACATAGATGAATATAGACACAAATGTGTTTGAAGAACAGCCTTGATGTTCTTGGCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554125.5
CDS TCA 72 bp CAGTCCTCTCTAAAAAGTTTAGAACTTAATACCCTCTaGCATACAAAGACTGGAAGAACCCGGAATGATAAC +
Preference number: 6 (lower is better)
Translates to: QSSLKSLELNTL*HTKTGRTRNDN
Trigger: GTTATCATTCCGGGTTCTTCCAGTCTTTGTATGTCAGAGGGTATTAAGTTCTAAACTTTTTAGAGAGGACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554125.5
CDS TCA 72 bp TGCCAGGCCTGCCCTACCTATTTTACAGGGTTATTATaGGGGCTAAATGAAATATTGCTTTCAGAGTATAAT +
Preference number: 6 (lower is better)
Translates to: CQACPTYFTGLL*GLNEILLSEYN
Trigger: ATTATACTCTGAAAGCAATATTTCATTTAGCCCTCATAATAACCCTGTAAAATAGGTAGGGCAGGCCTGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554125.5
CDS GCA 72 bp CAGAAAGACAACTTAGTGACACCATTTAAGGAAGAATaGAGTTTTCGTGATCCAAGAAATTGTAGTGACCCA +
Preference number: 6 (lower is better)
Translates to: QKDNLVTPFKEE*SFRDPRNCSDP
Trigger: TGGGTCACTACAATTTCTTGGATCACGAAAACTGCATTCTTCCTTAAATGGTGTCACTAAGTTGTCTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556663.5
CDS CCA 72 bp TTCAAACACATTTGTGTCTATATTCATCTATGTGTGTaGACCGTGCTAAACATCAGGCTACACATTTCAGCA +
Preference number: 6 (lower is better)
Translates to: FKHICVYIHLCV*TVLNIRLHISA
Trigger: TGCTGAAATGTGTAGCCTGATGTTTAGCACGGTCCACACACATAGATGAATATAGACACAAATGTGTTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554125.5
CDS CCA 72 bp GAGGTTCCAATCTTGGTTCTATTAGCTGTATCACTTTaGGCAAATAGTTTGAATCTTACAGATCTCCAGTTC +
Preference number: 6 (lower is better)
Translates to: EVPILVLLAVSL*ANSLNLTDLQF
Trigger: GAACTGGAGATCTGTAAGATTCAAACTATTTGCCCAAAGTGATACAGCTAATAGAACCAAGATTGGAACCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554125.5
CDS CAA 72 bp AGAACAAATAAAAACCTCAGGCAGAACAGCACAAACTaGAACATGGAACGAAGTCATCAAACAACTTGCAGT +
Preference number: 6 (lower is better)
Translates to: RTNKNLRQNSTN*NMERSHQTTCS
Trigger: ACTGCAAGTTGTTTGATGACTTCGTTCCATGTTCAAGTTTGTGCTGTTCTGCCTGAGGTTTTTATTTGTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557207.1
CDS GCA 72 bp ATCAAAATAACAAGAAAGAGGAAACCTTACCTCATGTaGACAAGCAGAAATGTGAGGAAAATCAGAAGCCAA +
Preference number: 6 (lower is better)
Translates to: IKITRKRKPYLM*TSRNVRKIRSQ
Trigger: TTGGCTTCTGATTTTCCTCACATTTCTGCTTGTGCACATGAGGTAAGGTTTCCTCTTTCTTGTTATTTTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554125.5
CDS CAA 72 bp AAAAATTGGAAAACGGCAATTCACTCTTCATTTAACTaGAGTACATTCACAATGCTTACCTACCATGGCACC +
Preference number: 6 (lower is better)
Translates to: KNWKTAIHSSFN*STFTMLTYHGT
Trigger: GGTGCCATGGTAGGTAAGCATTGTGAATGTACTCAAGTTAAATGAAGAGTGAATTGCCGTTTTCCAATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554125.5