RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPAT4 (Homo sapiens)

Ensembl gene IDs: ENSG00000158669

Ensembl transcript IDs: ENST00000396987.7, ENST00000518628.1, ENST00000519853.5, ENST00000519921.5, ENST00000520223.1, ENST00000520258.1, ENST00000521121.1, ENST00000521184.1, ENST00000521349.1, ENST00000521806.5, ENST00000523906.1

Found 307 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGCCCGGCCCGCACAGGACTTCCCTCCACAGCACTGACTCCACGTaGCTTCACACCAGGTGCGGCCACACCTGCCGGCAGGGGCCGCAG +
Preference number: 1 (lower is better)
Translates to: LPGPHRTSLHSTDST*LHTRCGHTCRQGPQ
Trigger: CTGCGGCCCCTGCCGGCAGGTGTGGCCGCACCTGGTGTGAAGTCACGTGGAGTCAGTGCTGTGGAGGGAAGTCCTGTGCGGGCCGGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR CCA 90 bp GCAGTGCACCTGCAGCTGCCCTTCCAGCCTACGGACCGGGCCACCTaGGACAAGTGCACCTGGAGAAGCCGAGTCTGGCCACCCGGGATG +
Preference number: 1 (lower is better)
Translates to: AVHLQLPFQPTDRAT*DKCTWRSRVWPPGM
Trigger: CATCCCGGGTGGCCAGACTCGGCTTCTCCAGGTGCACTTGTCCCAGGTGGCCCGGTCCGTAGGCTGGAAGGGCAGCTGCAGGTGCACTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR TCA 90 bp GCTCTCCTCACTGCCCGGCCCGCACAGGACTTCCCTCCACAGCACTaGCTCCACGTGACTTCACACCAGGTGCGGCCACACCTGCCGGCA +
Preference number: 1 (lower is better)
Translates to: ALLTARPAQDFPPQH*LHVTSHQVRPHLPA
Trigger: TGCCGGCAGGTGTGGCCGCACCTGGTGTGAAGTCACGTGGAGTCAGTGCTGTGGAGGGAAGTCCTGTGCGGGCCGGGCAGTGAGGAGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR GCA 90 bp CTGCAGCCCCAGGAGCACAGCTTCACTCCCACCCACTCCCTGAACTaGAGGCCAGAGGGCGACCTTGGGGACGTGACACTCAGCACCACA +
Preference number: 1 (lower is better)
Translates to: LQPQEHSFTPTHSLN*RPEGDLGDVTLSTT
Trigger: TGTGGTGCTGAGTGTCACGTCCCCAAGGTCGCCCTCTGGCCTGCAGTTCAGGGAGTGGGTGGGAGTGAAGCTGTGCTCCTGGGGCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR CCA 90 bp GGGGAGAGAGTGGGGTGTGCGTGCTGTAGAAGATGGATGGCTGCGTaGCCATATCCTAACCTGTCCGCGAGGCAGTGCACCTGCAGCTGC +
Preference number: 1 (lower is better)
Translates to: GERVGCACCRRWMAA*PYPNLSARQCTCSC
Trigger: GCAGCTGCAGGTGCACTGCCTCGCGGACAGGTTAGGATATGGCCACGCAGCCATCCATCTTCTACAGCACGCACACCCCACTCTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR GCA 90 bp TCCTCGCTCCAGCAGTCAGTTGGCTTCTCCGCAGCCCCAGGGCCATaGTCCCAGAAGAGAACGGGAATCCTCACGAGAAGCCTGCTACTC +
Preference number: 1 (lower is better)
Translates to: SSLQQSVGFSAAPGP*SQKRTGILTRSLLL
Trigger: GAGTAGCAGGCTTCTCGTGAGGATTCCCGTTCTCTTCTGGGAGCATGGCCCTGGGGCTGCGGAGAAGCCAACTGACTGCTGGAGCGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR GCA 90 bp AGGGGAGGTTACGTTTCTGCAGGCGTGAATCAGTGCTCTCCTCACTaGCCGGCCCGCACAGGACTTCCCTCCACAGCACTGACTCCACGT +
Preference number: 1 (lower is better)
Translates to: RGGYVSAGVNQCSPH*PARTGLPSTALTPR
Trigger: ACGTGGAGTCAGTGCTGTGGAGGGAAGTCCTGTGCGGGCCGGGCAGTGAGGAGAGCACTGATTCACGCCTGCAGAAACGTAACCTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR GCA 90 bp GCATACACGGAAAGGGGAGGTTACGTTTCTGCAGGCGTGAATCAGTaGTCTCCTCACTGCCCGGCCCGCACAGGACTTCCCTCCACAGCA +
Preference number: 1 (lower is better)
Translates to: AYTERGGYVSAGVNQ*SPHCPARTGLPSTA
Trigger: TGCTGTGGAGGGAAGTCCTGTGCGGGCCGGGCAGTGAGGAGAGCACTGATTCACGCCTGCAGAAACGTAACCTCCCCTTTCCGTGTATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR CCA 90 bp CATGAAACTGGTGAAACCCCAGAACCCACAGGGGCTGCTTGGCCTTaGCTCTGCCTCCACTGTGACTGTACAGCAGGCACCAGTGGCCGA +
Preference number: 1 (lower is better)
Translates to: HETGETPEPTGAAWP*LCLHCDCTAGTSGR
Trigger: TCGGCCACTGGTGCCTGCTGTACAGTCACAGTGGAGGCAGAGCCAAGGCCAAGCAGCCCCTGTGGGTTCTGGGGTTTCACCAGTTTCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR CCA 90 bp GAGGAGCATGAAACTGGTGAAACCCCAGAACCCACAGGGGCTGCTTaGCCTTGGCTCTGCCTCCACTGTGACTGTACAGCAGGCACCAGT +
Preference number: 1 (lower is better)
Translates to: EEHETGETPEPTGAA*PWLCLHCDCTAGTS
Trigger: ACTGGTGCCTGCTGTACAGTCACAGTGGAGGCAGAGCCAAGGCCAAGCAGCCCCTGTGGGTTCTGGGGTTTCACCAGTTTCATGCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR CCA 90 bp ATTGACTGGGGGAGAGAGTGGGGTGTGCGTGCTGTAGAAGATGGATaGCTGCGTGGCCATATCCTAACCTGTCCGCGAGGCAGTGCACCT +
Preference number: 1 (lower is better)
Translates to: IDWGREWGVRAVEDG*LRGHILTCPRGSAP
Trigger: AGGTGCACTGCCTCGCGGACAGGTTAGGATATGGCCACGCAGCCATCCATCTTCTACAGCACGCACACCCCACTCTCTCCCCCAGTCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR GCA 90 bp CAGGGCCATGCTCCCAGAAGAGAACGGGAATCCTCACGAGAAGCCTaGTACTCAGGGCCACAGCCAGGGGAGAAAGTAAAGGGAGAAGTC +
Preference number: 1 (lower is better)
Translates to: QGHAPRRERESSREA*YSGPQPGEKVKGEV
Trigger: GACTTCTCCCTTTACTTTCTCCCCTGGCTGTGGCCCTGAGTAGCAGGCTTCTCGTGAGGATTCCCGTTCTCTTCTGGGAGCATGGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR CCA 90 bp CACATTCAACAAAGCGCGCATCACATGGGGAGTTCAGGGTTAGCCTaGAGTACGAACACACGTTCTCCCCATGGCCCAGTCAGCGGCCCA +
Preference number: 1 (lower is better)
Translates to: HIQQSAHHMGSSGLA*STNTRSPHGPVSGP
Trigger: TGGGCCGCTGACTGGGCCATGGGGAGAACGTGTGTTCGTACTCCAGGCTAACCCTGAACTCCCCATGTGATGCGCGCTTTGTTGAATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR CCA 90 bp GAAAAGGAGATTGCAGGGCCAACCCAGCAGGTACCACATGCAAAGTaGATCTGTCTGCAGCCCCAGGAGCACAGCTTCACTCCCACCCAC +
Preference number: 1 (lower is better)
Translates to: EKEIAGPTQQVPHAK*ICLQPQEHSFTPTH
Trigger: GTGGGTGGGAGTGAAGCTGTGCTCCTGGGGCTGCAGACAGATCCACTTTGCATGTGGTACCTGCTGGGTTGGCCCTGCAATCTCCTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR CCA 90 bp CTGTGCCGTGAAGGTCACACGATGGCACCCAAAAATGCCTGTCACTaGTCTGGGAAGGGCATTTCAGGGATCTGGAGCACTCCCCCTGAC +
Preference number: 1 (lower is better)
Translates to: LCREGHTMAPKNACH*SGKGISGIWSTPPD
Trigger: GTCAGGGGGAGTGCTCCAGATCCCTGAAATGCCCTTCCCAGACCAGTGACAGGCATTTTTGGGTGCCATCGTGTGACCTTCACGGCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR GCA 90 bp AAGATACTGCCCAGCCTGAGAGCAGTATGGCCCCAGCCCCATGGCTaGCTAAAGCCCTTGAGGTCACCCTCAAGTGGGTTAGTTCCACTA +
Preference number: 1 (lower is better)
Translates to: KILPSLRAVWPQPHG*LKPLRSPSSGLVPL
Trigger: TAGTGGAACTAACCCACTTGAGGGTGACCTCAAGGGCTTTAGGCAGCCATGGGGCTGGGGCCATACTGCTCTCAGGCTGGGCAGTATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR CCA 90 bp AATGAAGATACTGCCCAGCCTGAGAGCAGTATGGCCCCAGCCCCATaGCTGCCTAAAGCCCTTGAGGTCACCCTCAAGTGGGTTAGTTCC +
Preference number: 1 (lower is better)
Translates to: NEDTAQPESSMAPAP*LPKALEVTLKWVSS
Trigger: GGAACTAACCCACTTGAGGGTGACCTCAAGGGCTTTAGGCAGCCATGGGGCTGGGGCCATACTGCTCTCAGGCTGGGCAGTATCTTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR TCA 90 bp AGCCTCTTCTCTGAAAGGCAGCACCAGGGACGGATTCTGACACGGTaGAGCATCAAGTCCCAAGGCTGGTTCTGCTGTCAAGGGAATCCC +
Preference number: 1 (lower is better)
Translates to: SLFSERQHQGRILTR*SIKSQGWFCCQGNP
Trigger: GGGATTCCCTTGACAGCAGAACCAGCCTTGGGACTTGATGCTTCACCGTGTCAGAATCCGTCCCTGGTGCTGCCTTTCAGAGAAGAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR GCA 90 bp CCCAGATTTCCACAGGACAACAGGGTTAGTGCCCACTGTTTGCTGTaGCGTGAAGGTCACACGATGGCACCCAAAAATGCCTGTCACTGG +
Preference number: 1 (lower is better)
Translates to: PRFPQDNRVSAHCLL*REGHTMAPKNACHW
Trigger: CCAGTGACAGGCATTTTTGGGTGCCATCGTGTGACCTTCACGGCACAGCAAACAGTGGGCACTAACCCTGTTGTCCTGTGGAAATCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR CCA 90 bp ACAGGGTTAGTGCCCACTGTTTGCTGTGCCGTGAAGGTCACACGATaGCACCCAAAAATGCCTGTCACTGGTCTGGGAAGGGCATTTCAG +
Preference number: 1 (lower is better)
Translates to: TGLVPTVCCAVKVTR*HPKMPVTGLGRAFQ
Trigger: CTGAAATGCCCTTCCCAGACCAGTGACAGGCATTTTTGGGTGCCATCGTGTGACCTTCACGGCACAGCAAACAGTGGGCACTAACCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR TCA 90 bp ACACATCAAGCCTCTTCTCTGAAAGGCAGCACCAGGGACGGATTCTaGCACGGTGAAGCATCAAGTCCCAAGGCTGGTTCTGCTGTCAAG +
Preference number: 1 (lower is better)
Translates to: THQASSLKGSTRDGF*HGEASSPKAGSAVK
Trigger: CTTGACAGCAGAACCAGCCTTGGGACTTGATGCTTCACCGTGTCAGAATCCGTCCCTGGTGCTGCCTTTCAGAGAAGAGGCTTGATGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR GCA 90 bp AGAGACCCAGATTTCCACAGGACAACAGGGTTAGTGCCCACTGTTTaGTGTGCCGTGAAGGTCACACGATGGCACCCAAAAATGCCTGTC +
Preference number: 1 (lower is better)
Translates to: RDPDFHRTTGLVPTV*CAVKVTRWHPKMPV
Trigger: GACAGGCATTTTTGGGTGCCATCGTGTGACCTTCACGGCACAGCAAACAGTGGGCACTAACCCTGTTGTCCTGTGGAAATCTGGGTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR CCA 90 bp ATTAACTTTCCCATCGGAGAGAGACATATTGACTGGGGGAGAGAGTaGGGTGTGCGTGCTGTAGAAGATGGATGGCTGCGTGGCCATATC +
Preference number: 1 (lower is better)
Translates to: INFPIGERHIDWGRE*GVRAVEDGWLRGHI
Trigger: GATATGGCCACGCAGCCATCCATCTTCTACAGCACGCACACCCCACTCTCTCCCCCAGTCAATATGTCTCTCTCCGATGGGAAAGTTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR TCA 90 bp CCGTATTTCCAAACCCAGAAGACTTCAGAGATCAAAGCCAAAGTTTaGACTATGGGCTTAAAAACAGAGAATTCAGAGGTGGACGAGGTC +
Preference number: 1 (lower is better)
Translates to: PYFQTQKTSEIKAKV*TMGLKTENSEVDEV
Trigger: GACCTCGTCCACCTCTGAATTCTCTGTTTTTAAGCCCATAGTTCAAACTTTGGCTTTGATCTCTGAAGTCTTCTGGGTTTGGAAATACGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR TCA 90 bp GACTTACAAGTGATTATTTATCAAAAGACCATTAATAGCAGGTACTaGAATGATGTGTTACTGGGTGGTGCTGGGAGACTAATAGGAAAT +
Preference number: 1 (lower is better)
Translates to: DLQVIIYQKTINSRY*NDVLLGGAGRLIGN
Trigger: ATTTCCTATTAGTCTCCCAGCACCACCCAGTAACACATCATTTCAGTACCTGCTATTAATGGTCTTTTGATAAATAATCACTTGTAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR-3UTR GCA 90 bp CTGGGGGAGAGAGTGGGGTGTGCGTGCTGTAGAAGATGGATGGCTGCGTGGCCAGTAGGCTGCGCCGGGTaGACAGGGATCCCGCTGCGG +
Preference number: 2 (lower is better)
Translates to: LGERVGCACCRRWMAAWPVGCAG*TGIPLR
Trigger: CCGCAGCGGGATCCCTGTGCACCCGGCGCAGCCTAC...TGGCCACGCAGCCATCCATCTTCTACAGCACGCACACCCCACTCTCTCCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR-3UTR GCA 90 bp CTGGGGGAGAGAGTGGGGTGTGCGTGCTGTAGAAGATGGATGGCTGCGTGGCCAGCACAGGGATCCCGCTaGGGCTCGGCGAAAGCCGGA +
Preference number: 2 (lower is better)
Translates to: LGERVGCACCRRWMAAWPAQGSR*GSAKAG
Trigger: TCCGGCTTTCGCCGAGCCGCAGCGGGATCCCTGTGC...TGGCCACGCAGCCATCCATCTTCTACAGCACGCACACCCCACTCTCTCCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR-3UTR TCA 90 bp TTGCTTCCCCTAGGCCTCACATCAGCGACCCGCACACACCCCGTCTCTGGAGAACGGCAACTCCAGCTCTaGGCCCGTTGGCACCCCGCA +
Preference number: 2 (lower is better)
Translates to: LLPLGLTSATRTHPVSGERQLQL*ARWHPA
Trigger: TGCGGGGTGCCAACGGGCTCAGAGCTGGAGTTGCCG...TTCTCCAGAGACGGGGTGTGTGCGGGTCGCTGATGTGAGGCCTAGGGGAAGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR-3UTR GCA 90 bp CTGGGGGAGAGAGTGGGGTGTGCGTGCTGTAGAAGATGGATGGCTGCGTGGCCACTGTCCGCGAGGCAGTaGACCTGCAGCTGCCCTTCC +
Preference number: 2 (lower is better)
Translates to: LGERVGCACCRRWMAAWPLSARQ*TCSCPS
Trigger: GGAAGGGCAGCTGCAGGTGCACTGCCTCGCGGACAG...TGGCCACGCAGCCATCCATCTTCTACAGCACGCACACCCCACTCTCTCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR-3UTR GCA 90 bp TCTGAGAACCACAATGAAGATACTGCCCAGCCTGAGAGCAGTATGGCCCCAGCCATGCAGCACAGGCCCTaGCCCGCCCCGGCCCCTCTG +
Preference number: 2 (lower is better)
Translates to: SENHNEDTAQPESSMAPAMQHRP*PAPAPL
Trigger: CAGAGGGGCCGGGGCGGGGCAGGGCCTGTGCTGCAT...GGCTGGGGCCATACTGCTCTCAGGCTGGGCAGTATCTTCATTGTGGTTCTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR-3UTR CCA 90 bp CTGGGGGAGAGAGTGGGGTGTGCGTGCTGTAGAAGATGGATGGCTGCGTGGCCAGCTCCAGCAGTCAGTTaGCTTCTCCGCAGCCCCAGG +
Preference number: 2 (lower is better)
Translates to: LGERVGCACCRRWMAAWPAPAVS*LLRSPR
Trigger: CCTGGGGCTGCGGAGAAGCCAACTGACTGCTGGAGC...TGGCCACGCAGCCATCCATCTTCTACAGCACGCACACCCCACTCTCTCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR-3UTR CCA 90 bp CTGGGGGAGAGAGTGGGGTGTGCGTGCTGTAGAAGATGGATGGCTGCGTGGCCAGGCATTTCAGGGATCTaGAGCACTCCCCCTGACCCC +
Preference number: 2 (lower is better)
Translates to: LGERVGCACCRRWMAAWPGISGI*STPPDP
Trigger: GGGGTCAGGGGGAGTGCTCCAGATCCCTGAAATGCC...TGGCCACGCAGCCATCCATCTTCTACAGCACGCACACCCCACTCTCTCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR-3UTR CCA 90 bp TCTGAGAACCACAATGAAGATACTGCCCAGCCTGAGAGCAGTATGGCCCCAGCCTTCCTGGAGAGCGGGTaGCCGCCCCCAGCACATCCC +
Preference number: 2 (lower is better)
Translates to: SENHNEDTAQPESSMAPAFLESG*PPPAHP
Trigger: GGGATGTGCTGGGGGCGGCCACCCGCTCTCCAGGAA...GGCTGGGGCCATACTGCTCTCAGGCTGGGCAGTATCTTCATTGTGGTTCTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR-3UTR GCA 90 bp TCAGGGTTAGCCTGGAGTACGAACACACGTTCTCCCCATGGCCCAGTCAGCGGCACAGTGCCTCAGCTGTaGCTTTCCTGGAGAGCGGGT +
Preference number: 2 (lower is better)
Translates to: SGLAWSTNTRSPHGPVSGTVPQL*LSWRAG
Trigger: ACCCGCTCTCCAGGAAAGGCACAGCTGAGGCACTGT...GCCGCTGACTGGGCCATGGGGAGAACGTGTGTTCGTACTCCAGGCTAACCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR-3UTR GCA 90 bp TTGCTTCCCCTAGGCCTCACATCAGCGACCCGCACACACCCCGTCTCTGGAGAAGTTCACCTTCTGAGCTaGAGGGTTCCTCGCTCCAGC +
Preference number: 2 (lower is better)
Translates to: LLPLGLTSATRTHPVSGEVHLLS*RVPRSS
Trigger: GCTGGAGCGAGGAACCCTGCAGCTCAGAAGGTGAAC...TTCTCCAGAGACGGGGTGTGTGCGGGTCGCTGATGTGAGGCCTAGGGGAAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR-3UTR GCA 90 bp CTGGGGGAGAGAGTGGGGTGTGCGTGCTGTAGAAGATGGATGGCTGCGTGGCCAGCCCACTGTTTGCTGTaGCGTGAAGGTCACACGATG +
Preference number: 2 (lower is better)
Translates to: LGERVGCACCRRWMAAWPAHCLL*REGHTM
Trigger: CATCGTGTGACCTTCACGGCACAGCAAACAGTGGGC...TGGCCACGCAGCCATCCATCTTCTACAGCACGCACACCCCACTCTCTCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR-3UTR CCA 90 bp TCTGAGAACCACAATGAAGATACTGCCCAGCCTGAGAGCAGTATGGCCCCAGCCCACACGTTCTCCCCATaGCCCAGTCAGCGGCCCACC +
Preference number: 2 (lower is better)
Translates to: SENHNEDTAQPESSMAPAHTFSP*PSQRPT
Trigger: GGTGGGCCGCTGACTGGGCCATGGGGAGAACGTGTG...GGCTGGGGCCATACTGCTCTCAGGCTGGGCAGTATCTTCATTGTGGTTCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR-3UTR GCA 90 bp CTGGGGGAGAGAGTGGGGTGTGCGTGCTGTAGAAGATGGATGGCTGCGTGGCCACCTGGCACACGGGCTTaGATAACAGACTCTTGTACC +
Preference number: 2 (lower is better)
Translates to: LGERVGCACCRRWMAAWPPGTRA*ITDSCT
Trigger: GGTACAAGAGTCTGTTATGCAAGCCCGTGTGCCAGG...TGGCCACGCAGCCATCCATCTTCTACAGCACGCACACCCCACTCTCTCCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR-3UTR GCA 90 bp TGCCTCCACTGTGACTGTACAGCAGGCACCAGTGGCCGACTCTTTTCCTGTGGTTCAGCCCGCACAGCGTaGAAAGGTGGGGAGTTCACT +
Preference number: 2 (lower is better)
Translates to: CLHCDCTAGTSGRLFSCGSARTA*KGGEFT
Trigger: AGTGAACTCCCCACCTTTGCACGCTGTGCGGGCTGA...ACCACAGGAAAAGAGTCGGCCACTGGTGCCTGCTGTACAGTCACAGTGGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR-3UTR GCA 90 bp TCTGAGAACCACAATGAAGATACTGCCCAGCCTGAGAGCAGTATGGCCCCAGCCACCCACTCCCTGAACTaGAGGCCAGAGGGCGACCTT +
Preference number: 2 (lower is better)
Translates to: SENHNEDTAQPESSMAPATHSLN*RPEGDL
Trigger: AAGGTCGCCCTCTGGCCTGCAGTTCAGGGAGTGGGT...GGCTGGGGCCATACTGCTCTCAGGCTGGGCAGTATCTTCATTGTGGTTCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR-3UTR GCA 90 bp CTGGGGGAGAGAGTGGGGTGTGCGTGCTGTAGAAGATGGATGGCTGCGTGGCCATTAGTGCCCACTGTTTaGTGTGCCGTGAAGGTCACA +
Preference number: 2 (lower is better)
Translates to: LGERVGCACCRRWMAAWPLVPTV*CAVKVT
Trigger: TGTGACCTTCACGGCACAGCAAACAGTGGGCACTAA...TGGCCACGCAGCCATCCATCTTCTACAGCACGCACACCCCACTCTCTCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR CAA 90 bp AGCCTGAGAGCAGTATGGCCCCAGCCCCATGGCTGCCTAAAGCCCTaGAGGTCACCCTCAAGTGGGTTAGTTCCACTAGCCCTGATGTTT +
Preference number: 2 (lower is better)
Translates to: SLRAVWPQPHGCLKP*RSPSSGLVPLALMF
Trigger: AAACATCAGGGCTAGTGGAACTAACCCACTTGAGGGTGACCTCAAGGGCTTTAGGCAGCCATGGGGCTGGGGCCATACTGCTCTCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR-3UTR GCA 90 bp GAAGCATCAAGTCCCAAGGCTGGTTCTGCTGTCAAGGGAATCCCACTAGCTTTACTGCCATGCAGCACATaGCCTGCCCACCCTGCCCCT +
Preference number: 2 (lower is better)
Translates to: EASSPKAGSAVKGIPLALLPCST*PAHPAP
Trigger: AGGGGCAGGGTGGGCAGGGCATGTGCTGCATGGCAG...TAAAGCTAGTGGGATTCCCTTGACAGCAGAACCAGCCTTGGGACTTGATGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR-3UTR TCA 90 bp GAAGCATCAAGTCCCAAGGCTGGTTCTGCTGTCAAGGGAATCCCACTAGCTTTAGCGACCTTGGGGACGTaGCACTCAGCACCACAGGCA +
Preference number: 2 (lower is better)
Translates to: EASSPKAGSAVKGIPLALATLGT*HSAPQA
Trigger: TGCCTGTGGTGCTGAGTGTCACGTCCCCAAGGTCGC...TAAAGCTAGTGGGATTCCCTTGACAGCAGAACCAGCCTTGGGACTTGATGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR-3UTR TCA 90 bp TCTGAGAACCACAATGAAGATACTGCCCAGCCTGAGAGCAGTATGGCCCCAGCCTTCCCTCCACAGCACTaGCTCCACGTGACTTCACAC +
Preference number: 2 (lower is better)
Translates to: SENHNEDTAQPESSMAPAFPPQH*LHVTSH
Trigger: GTGTGAAGTCACGTGGAGTCAGTGCTGTGGAGGGAA...GGCTGGGGCCATACTGCTCTCAGGCTGGGCAGTATCTTCATTGTGGTTCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR-3UTR GCA 90 bp GAAGCATCAAGTCCCAAGGCTGGTTCTGCTGTCAAGGGAATCCCACTAGCTTTACAGTGCTCTCCTCACTaGCCGGCCCGCACAGGACTT +
Preference number: 2 (lower is better)
Translates to: EASSPKAGSAVKGIPLALQCSPH*PARTGL
Trigger: AAGTCCTGTGCGGGCCGGGCAGTGAGGAGAGCACTG...TAAAGCTAGTGGGATTCCCTTGACAGCAGAACCAGCCTTGGGACTTGATGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR-3UTR CCA 90 bp TCTGAGAACCACAATGAAGATACTGCCCAGCCTGAGAGCAGTATGGCCCCAGCCCACACACCCCGTCTCTaGAGAAATCCACGTCTGTGC +
Preference number: 2 (lower is better)
Translates to: SENHNEDTAQPESSMAPAHTPRL*RNPRLC
Trigger: GCACAGACGTGGATTTCTCCAGAGACGGGGTGTGTG...GGCTGGGGCCATACTGCTCTCAGGCTGGGCAGTATCTTCATTGTGGTTCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR-3UTR GCA 90 bp TCTGAGAACCACAATGAAGATACTGCCCAGCCTGAGAGCAGTATGGCCCCAGCCGGGAGGTTACGTTTCTaGAGGCGTGAATCAGTGCTC +
Preference number: 2 (lower is better)
Translates to: SENHNEDTAQPESSMAPAGRLRF*RRESVL
Trigger: GAGCACTGATTCACGCCTGCAGAAACGTAACCTCCC...GGCTGGGGCCATACTGCTCTCAGGCTGGGCAGTATCTTCATTGTGGTTCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR CAA 90 bp CAGAGACCCAGATTTCCACAGGACAACAGGGTTAGTGCCCACTGTTaGCTGTGCCGTGAAGGTCACACGATGGCACCCAAAAATGCCTGT +
Preference number: 2 (lower is better)
Translates to: QRPRFPQDNRVSAHC*LCREGHTMAPKNAC
Trigger: ACAGGCATTTTTGGGTGCCATCGTGTGACCTTCACGGCACAGCAAACAGTGGGCACTAACCCTGTTGTCCTGTGGAAATCTGGGTCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR-3UTR GCA 90 bp ACTCATGAACTCCTTAAACCTCCCATTTGGCAAGTATCCCACCACAGTTGTGCCCCCTGTGAAAGCCAGTaGTATCCTGGGACCTGGACC +
Preference number: 2 (lower is better)
Translates to: THELLKPPIWQVSHHSCAPCESQ*YPGTWT
Trigger: GGTCCAGGTCCCAGGATAGCACTGGCTTTCACAGGG...GGCACAACTGTGGTGGGATACTTGCCAAATGGGAGGTTTAAGGAGTTCATGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521806.5
3UTR-3UTR CCA 90 bp TCTGAGAACCACAATGAAGATACTGCCCAGCCTGAGAGCAGTATGGCCCCAGCCAGTTCAGGGTTAGCCTaGAGTACGAACACACGTTCT +
Preference number: 2 (lower is better)
Translates to: SENHNEDTAQPESSMAPASSGLA*STNTRS
Trigger: AGAACGTGTGTTCGTACTCCAGGCTAACCCTGAACT...GGCTGGGGCCATACTGCTCTCAGGCTGGGCAGTATCTTCATTGTGGTTCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR-3UTR CCA 90 bp CCTGTCATGGTAGGTGATGATGGCTGTCAGCGCTCGCACGCAGATCCGGTAACACTTAAACCTCCCATTTaGCAAGTATCCCACCACAGT +
Preference number: 2 (lower is better)
Translates to: PVMVGDDGCQRSHADPVTLKPPI*QVSHHS
Trigger: ACTGTGGTGGGATACTTGCCAAATGGGAGGTTTAAG...TGTTACCGGATCTGCGTGCGAGCGCTGACAGCCATCATCACCTACCATGACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521806.5
3UTR-3UTR TCA 90 bp GAAGCATCAAGTCCCAAGGCTGGTTCTGCTGTCAAGGGAATCCCACTAGCTTTAACGTTTCTGCAGGCGTaGATCAGTGCTCTCCTCACT +
Preference number: 2 (lower is better)
Translates to: EASSPKAGSAVKGIPLALTFLQA*ISALLT
Trigger: AGTGAGGAGAGCACTGATTCACGCCTGCAGAAACGT...TAAAGCTAGTGGGATTCCCTTGACAGCAGAACCAGCCTTGGGACTTGATGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR-3UTR CCA 90 bp TGCCTCCACTGTGACTGTACAGCAGGCACCAGTGGCCGACTCTTTTCCTGTGGTGACTCATATTACAGATaGGGAAACCGAGACACACAT +
Preference number: 2 (lower is better)
Translates to: CLHCDCTAGTSGRLFSCGDSYYR*GNRDTH
Trigger: ATGTGTGTCTCGGTTTCCCCATCTGTAATATGAGTC...ACCACAGGAAAAGAGTCGGCCACTGGTGCCTGCTGTACAGTCACAGTGGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR-3UTR TCA 90 bp GAAGCATCAAGTCCCAAGGCTGGTTCTGCTGTCAAGGGAATCCCACTAGCTTTAAGATCTGCAAGCATCTaGGACGAGCTGTTCACCTTC +
Preference number: 2 (lower is better)
Translates to: EASSPKAGSAVKGIPLALRSASI*DELFTF
Trigger: GAAGGTGAACAGCTCGTCTCAGATGCTTGCAGATCT...TAAAGCTAGTGGGATTCCCTTGACAGCAGAACCAGCCTTGGGACTTGATGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR-3UTR CCA 90 bp GAAGCATCAAGTCCCAAGGCTGGTTCTGCTGTCAAGGGAATCCCACTAGCTTTACAGAGAATTCAGAGGTaGACGAGGTCTCTGAGGTCA +
Preference number: 2 (lower is better)
Translates to: EASSPKAGSAVKGIPLALQRIQR*TRSLRS
Trigger: TGACCTCAGAGACCTCGTCCACCTCTGAATTCTCTG...TAAAGCTAGTGGGATTCCCTTGACAGCAGAACCAGCCTTGGGACTTGATGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR-3UTR GCA 90 bp GAAGCATCAAGTCCCAAGGCTGGTTCTGCTGTCAAGGGAATCCCACTAGCTTTAGGGTCACTTGGGGCTTaGAGGACCCCTAATTTAAAA +
Preference number: 2 (lower is better)
Translates to: EASSPKAGSAVKGIPLALGSLGA*RTPNLK
Trigger: TTTTAAATTAGGGGTCCTGCAAGCCCCAAGTGACCC...TAAAGCTAGTGGGATTCCCTTGACAGCAGAACCAGCCTTGGGACTTGATGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR GCA 72 bp CCCTTCCAGCCTACGGACCGGGCCACCTGGGACAAGTaGACCTGGAGAAGCCGAGTCTGGCCACCCGGGATG +
Preference number: 3 (lower is better)
Translates to: PFQPTDRATWDK*TWRSRVWPPGM
Trigger: CATCCCGGGTGGCCAGACTCGGCTTCTCCAGGTGCACTTGTCCCAGGTGGCCCGGTCCGTAGGCTGGAAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR GCA 72 bp GCTGCGTGGCCATATCCTAACCTGTCCGCGAGGCAGTaGACCTGCAGCTGCCCTTCCAGCCTACGGACCGGG +
Preference number: 3 (lower is better)
Translates to: AAWPYPNLSARQ*TCSCPSSLRTG
Trigger: CCCGGTCCGTAGGCTGGAAGGGCAGCTGCAGGTGCACTGCCTCGCGGACAGGTTAGGATATGGCCACGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR TCA 72 bp CCGCACAGGACTTCCCTCCACAGCACTGACTCCACGTaGCTTCACACCAGGTGCGGCCACACCTGCCGGCAG +
Preference number: 3 (lower is better)
Translates to: PHRTSLHSTDST*LHTRCGHTCRQ
Trigger: CTGCCGGCAGGTGTGGCCGCACCTGGTGTGAAGTCACGTGGAGTCAGTGCTGTGGAGGGAAGTCCTGTGCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR TCA 72 bp ACTGCCCGGCCCGCACAGGACTTCCCTCCACAGCACTaGCTCCACGTGACTTCACACCAGGTGCGGCCACAC +
Preference number: 3 (lower is better)
Translates to: TARPAQDFPPQH*LHVTSHQVRPH
Trigger: GTGTGGCCGCACCTGGTGTGAAGTCACGTGGAGTCAGTGCTGTGGAGGGAAGTCCTGTGCGGGCCGGGCAGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR GCA 72 bp TGGCCATATCCTAACCTGTCCGCGAGGCAGTGCACCTaGAGCTGCCCTTCCAGCCTACGGACCGGGCCACCT +
Preference number: 3 (lower is better)
Translates to: WPYPNLSARQCT*SCPSSLRTGPP
Trigger: AGGTGGCCCGGTCCGTAGGCTGGAAGGGCAGCTGCAGGTGCACTGCCTCGCGGACAGGTTAGGATATGGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR-3UTR CAA 90 bp CTGGGGGAGAGAGTGGGGTGTGCGTGCTGTAGAAGATGGATGGCTGCGTGGCCAAGGCTGGGGGCGATGTaGAGGCCGAAGCCAGCCACA +
Preference number: 3 (lower is better)
Translates to: LGERVGCACCRRWMAAWPRLGAM*RPKPAT
Trigger: TGTGGCTGGCTTCGGCCTCAACATCGCCCCCAGCCT...TGGCCACGCAGCCATCCATCTTCTACAGCACGCACACCCCACTCTCTCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR CCA 72 bp AGGGTTAGCCTGGAGTACGAACACACGTTCTCCCCATaGCCCAGTCAGCGGCCCACCTGGCCTCTTCCCCTC +
Preference number: 3 (lower is better)
Translates to: RVSLEYEHTFSP*PSQRPTWPLPL
Trigger: GAGGGGAAGAGGCCAGGTGGGCCGCTGACTGGGCCATGGGGAGAACGTGTGTTCGTACTCCAGGCTAACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR-3UTR CAA 90 bp TCTGAGAACCACAATGAAGATACTGCCCAGCCTGAGAGCAGTATGGCCCCAGCCCCAGCTCTGAGCCCGTaGGCACCCCGCACGGTGGCC +
Preference number: 3 (lower is better)
Translates to: SENHNEDTAQPESSMAPAPALSP*APRTVA
Trigger: GGCCACCGTGCGGGGTGCCAACGGGCTCAGAGCTGG...GGCTGGGGCCATACTGCTCTCAGGCTGGGCAGTATCTTCATTGTGGTTCTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR-3UTR CAA 90 bp TGCCTCCACTGTGACTGTACAGCAGGCACCAGTGGCCGACTCTTTTCCTGTGGTCGCTCCAGCAGTCAGTaGGCTTCTCCGCAGCCCCAG +
Preference number: 3 (lower is better)
Translates to: CLHCDCTAGTSGRLFSCGRSSSQ*ASPQPQ
Trigger: CTGGGGCTGCGGAGAAGCCAACTGACTGCTGGAGCG...ACCACAGGAAAAGAGTCGGCCACTGGTGCCTGCTGTACAGTCACAGTGGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR-3UTR CAA 90 bp CTGGGGGAGAGAGTGGGGTGTGCGTGCTGTAGAAGATGGATGGCTGCGTGGCCAGCAGAGAAAAGGAGATaGCAGGGCCAACCCAGCAGG +
Preference number: 3 (lower is better)
Translates to: LGERVGCACCRRWMAAWPAEKRR*QGQPSR
Trigger: CCTGCTGGGTTGGCCCTGCAATCTCCTTTTCTCTGC...TGGCCACGCAGCCATCCATCTTCTACAGCACGCACACCCCACTCTCTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR GCA 72 bp CAGCAGTCAGTTGGCTTCTCCGCAGCCCCAGGGCCATaGTCCCAGAAGAGAACGGGAATCCTCACGAGAAGC +
Preference number: 3 (lower is better)
Translates to: QQSVGFSAAPGP*SQKRTGILTRS
Trigger: GCTTCTCGTGAGGATTCCCGTTCTCTTCTGGGAGCATGGCCCTGGGGCTGCGGAGAAGCCAACTGACTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR GCA 72 bp TACGTTTCTGCAGGCGTGAATCAGTGCTCTCCTCACTaGCCGGCCCGCACAGGACTTCCCTCCACAGCACTG +
Preference number: 3 (lower is better)
Translates to: YVSAGVNQCSPH*PARTGLPSTAL
Trigger: CAGTGCTGTGGAGGGAAGTCCTGTGCGGGCCGGGCAGTGAGGAGAGCACTGATTCACGCCTGCAGAAACGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR GCA 72 bp GAAAGGGGAGGTTACGTTTCTGCAGGCGTGAATCAGTaGTCTCCTCACTGCCCGGCCCGCACAGGACTTCCC +
Preference number: 3 (lower is better)
Translates to: ERGGYVSAGVNQ*SPHCPARTGLP
Trigger: GGGAAGTCCTGTGCGGGCCGGGCAGTGAGGAGAGCACTGATTCACGCCTGCAGAAACGTAACCTCCCCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR GCA 72 bp CCCAGCCTGAGAGCAGTATGGCCCCAGCCCCATGGCTaGCTAAAGCCCTTGAGGTCACCCTCAAGTGGGTTA +
Preference number: 3 (lower is better)
Translates to: PSLRAVWPQPHG*LKPLRSPSSGL
Trigger: TAACCCACTTGAGGGTGACCTCAAGGGCTTTAGGCAGCCATGGGGCTGGGGCCATACTGCTCTCAGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR CCA 72 bp TGCCACGAGGGAGCATGGGTCCCAAGTGAGGGCTGGTaGGGCATGAATGGGGAGCTGAGGAGCATGAAACTG +
Preference number: 3 (lower is better)
Translates to: CHEGAWVPSEGW*GMNGELRSMKL
Trigger: CAGTTTCATGCTCCTCAGCTCCCCATTCATGCCCCACCAGCCCTCACTTGGGACCCATGCTCCCTCGTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR CCA 72 bp GTGGGGTGTGCGTGCTGTAGAAGATGGATGGCTGCGTaGCCATATCCTAACCTGTCCGCGAGGCAGTGCACC +
Preference number: 3 (lower is better)
Translates to: VGCACCRRWMAA*PYPNLSARQCT
Trigger: GGTGCACTGCCTCGCGGACAGGTTAGGATATGGCCACGCAGCCATCCATCTTCTACAGCACGCACACCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR CCA 72 bp GGGAGAGAGTGGGGTGTGCGTGCTGTAGAAGATGGATaGCTGCGTGGCCATATCCTAACCTGTCCGCGAGGC +
Preference number: 3 (lower is better)
Translates to: GREWGVRAVEDG*LRGHILTCPRG
Trigger: GCCTCGCGGACAGGTTAGGATATGGCCACGCAGCCATCCATCTTCTACAGCACGCACACCCCACTCTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR CCA 72 bp CTGGGGGAGAGAGTGGGGTGTGCGTGCTGTAGAAGATaGATGGCTGCGTGGCCATATCCTAACCTGTCCGCG +
Preference number: 3 (lower is better)
Translates to: LGERVGCACCRR*MAAWPYPNLSA
Trigger: CGCGGACAGGTTAGGATATGGCCACGCAGCCATCCATCTTCTACAGCACGCACACCCCACTCTCTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR TCA 72 bp CATACACGGAAAGGGGAGGTTACGTTTCTGCAGGCGTaGATCAGTGCTCTCCTCACTGCCCGGCCCGCACAG +
Preference number: 3 (lower is better)
Translates to: HTRKGEVTFLQA*ISALLTARPAQ
Trigger: CTGTGCGGGCCGGGCAGTGAGGAGAGCACTGATTCACGCCTGCAGAAACGTAACCTCCCCTTTCCGTGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR GCA 72 bp CAACCCAGCAGGTACCACATGCAAAGTGGATCTGTCTaGAGCCCCAGGAGCACAGCTTCACTCCCACCCACT +
Preference number: 3 (lower is better)
Translates to: QPSRYHMQSGSV*SPRSTASLPPT
Trigger: AGTGGGTGGGAGTGAAGCTGTGCTCCTGGGGCTGCAGACAGATCCACTTTGCATGTGGTACCTGCTGGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR CCA 72 bp CAAAGCGCGCATCACATGGGGAGTTCAGGGTTAGCCTaGAGTACGAACACACGTTCTCCCCATGGCCCAGTC +
Preference number: 3 (lower is better)
Translates to: QSAHHMGSSGLA*STNTRSPHGPV
Trigger: GACTGGGCCATGGGGAGAACGTGTGTTCGTACTCCAGGCTAACCCTGAACTCCCCATGTGATGCGCGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR CCA 72 bp ACCACAATGAAGATACTGCCCAGCCTGAGAGCAGTATaGCCCCAGCCCCATGGCTGCCTAAAGCCCTTGAGG +
Preference number: 3 (lower is better)
Translates to: TTMKILPSLRAV*PQPHGCLKPLR
Trigger: CCTCAAGGGCTTTAGGCAGCCATGGGGCTGGGGCCATACTGCTCTCAGGCTGGGCAGTATCTTCATTGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR-3UTR CAA 90 bp TCTGAGAACCACAATGAAGATACTGCCCAGCCTGAGAGCAGTATGGCCCCAGCCCTGACTATGGGTCACTaGGGGCTTGCAGGACCCCTA +
Preference number: 3 (lower is better)
Translates to: SENHNEDTAQPESSMAPALTMGH*GLAGPL
Trigger: TAGGGGTCCTGCAAGCCCCAAGTGACCCATAGTCAG...GGCTGGGGCCATACTGCTCTCAGGCTGGGCAGTATCTTCATTGTGGTTCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR CCA 72 bp GTGCCCACTGTTTGCTGTGCCGTGAAGGTCACACGATaGCACCCAAAAATGCCTGTCACTGGTCTGGGAAGG +
Preference number: 3 (lower is better)
Translates to: VPTVCCAVKVTR*HPKMPVTGLGR
Trigger: CCTTCCCAGACCAGTGACAGGCATTTTTGGGTGCCATCGTGTGACCTTCACGGCACAGCAAACAGTGGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR TCA 72 bp GCCTCTTCTCTGAAAGGCAGCACCAGGGACGGATTCTaGCACGGTGAAGCATCAAGTCCCAAGGCTGGTTCT +
Preference number: 3 (lower is better)
Translates to: ASSLKGSTRDGF*HGEASSPKAGS
Trigger: AGAACCAGCCTTGGGACTTGATGCTTCACCGTGTCAGAATCCGTCCCTGGTGCTGCCTTTCAGAGAAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR GCA 72 bp TCTAGCCAAGTCCCTAGTTATGACTCAGGAGACGGATaGAGAGAAGTGAAGGTGCAGCAGGCTTGGAGGGGG +
Preference number: 3 (lower is better)
Translates to: SSQVPSYDSGDG*REVKVQQAWRG
Trigger: CCCCCTCCAAGCCTGCTGCACCTTCACTTCTCTGCATCCGTCTCCTGAGTCATAACTAGGGACTTGGCTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR GCA 72 bp CCACAGGACAACAGGGTTAGTGCCCACTGTTTGCTGTaGCGTGAAGGTCACACGATGGCACCCAAAAATGCC +
Preference number: 3 (lower is better)
Translates to: PQDNRVSAHCLL*REGHTMAPKNA
Trigger: GGCATTTTTGGGTGCCATCGTGTGACCTTCACGGCACAGCAAACAGTGGGCACTAACCCTGTTGTCCTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR TCA 72 bp TCTGAAAGGCAGCACCAGGGACGGATTCTGACACGGTaGAGCATCAAGTCCCAAGGCTGGTTCTGCTGTCAA +
Preference number: 3 (lower is better)
Translates to: SERQHQGRILTR*SIKSQGWFCCQ
Trigger: TTGACAGCAGAACCAGCCTTGGGACTTGATGCTTCACCGTGTCAGAATCCGTCCCTGGTGCTGCCTTTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR CCA 72 bp GAAGGTCACACGATGGCACCCAAAAATGCCTGTCACTaGTCTGGGAAGGGCATTTCAGGGATCTGGAGCACT +
Preference number: 3 (lower is better)
Translates to: EGHTMAPKNACH*SGKGISGIWST
Trigger: AGTGCTCCAGATCCCTGAAATGCCCTTCCCAGACCAGTGACAGGCATTTTTGGGTGCCATCGTGTGACCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR GCA 72 bp GATTTCCACAGGACAACAGGGTTAGTGCCCACTGTTTaGTGTGCCGTGAAGGTCACACGATGGCACCCAAAA +
Preference number: 3 (lower is better)
Translates to: DFHRTTGLVPTV*CAVKVTRWHPK
Trigger: TTTTGGGTGCCATCGTGTGACCTTCACGGCACAGCAAACAGTGGGCACTAACCCTGTTGTCCTGTGGAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR TCA 72 bp CTTAAAAACAGAGAATTCAGAGGTGGACGAGGTCTCTaGGGTCATCTAGCCAAGTCCCTAGTTATGACTCAG +
Preference number: 3 (lower is better)
Translates to: LKNREFRGGRGL*GHLAKSLVMTQ
Trigger: CTGAGTCATAACTAGGGACTTGGCTAGATGACCTCAGAGACCTCGTCCACCTCTGAATTCTCTGTTTTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR CCA 72 bp AGAAAATCAAGTTCCTGGCCAATTCCAGGAAGGAAATaGCAGGATTCAGAGACCCAGATTTCCACAGGACAA +
Preference number: 3 (lower is better)
Translates to: RKSSSWPIPGRK*QDSETQISTGQ
Trigger: TTGTCCTGTGGAAATCTGGGTCTCTGAATCCTGCCATTTCCTTCCTGGAATTGGCCAGGAACTTGATTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR TCA 72 bp CAAACCCAGAAGACTTCAGAGATCAAAGCCAAAGTTTaGACTATGGGCTTAAAAACAGAGAATTCAGAGGTG +
Preference number: 3 (lower is better)
Translates to: QTQKTSEIKAKV*TMGLKTENSEV
Trigger: CACCTCTGAATTCTCTGTTTTTAAGCCCATAGTTCAAACTTTGGCTTTGATCTCTGAAGTCTTCTGGGTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp TCAGGGTTAGCCTGGAGTACGAACACACGTTCTCCCCATGGCCCAGTCAGCGGCATGCAGCACAGGCCCTaGCCCGCCCCGGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: SGLAWSTNTRSPHGPVSGMQHRP*PAPAPL
Trigger: CAGAGGGGCCGGGGCGGGGCAGGGCCTGTGCTGCAT...GCCGCTGACTGGGCCATGGGGAGAACGTGTGTTCGTACTCCAGGCTAACCCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR TCA 90 bp TCAGGGTTAGCCTGGAGTACGAACACACGTTCTCCCCATGGCCCAGTCAGCGGCGGCTGGGGGCGATGTTaGGGCCGAAGCCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: SGLAWSTNTRSPHGPVSGGWGRC*GRSQPQ
Trigger: CTGTGGCTGGCTTCGGCCTCAACATCGCCCCCAGCC...GCCGCTGACTGGGCCATGGGGAGAACGTGTGTTCGTACTCCAGGCTAACCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp TTGCTTCCCCTAGGCCTCACATCAGCGACCCGCACACACCCCGTCTCTGGAGAACTGCCATGCAGCACATaGCCTGCCCACCCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: LLPLGLTSATRTHPVSGELPCST*PAHPAP
Trigger: AGGGGCAGGGTGGGCAGGGCATGTGCTGCATGGCAG...TTCTCCAGAGACGGGGTGTGTGCGGGTCGCTGATGTGAGGCCTAGGGGAAGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp TGCCTCCACTGTGACTGTACAGCAGGCACCAGTGGCCGACTCTTTTCCTGTGGTAGGTGCGGCCACACCTaGCGGCAGGGGCCGCAGACA +
Preference number: 4 (lower is better)
Translates to: CLHCDCTAGTSGRLFSCGRCGHT*RQGPQT
Trigger: TGTCTGCGGCCCCTGCCGGCAGGTGTGGCCGCACCT...ACCACAGGAAAAGAGTCGGCCACTGGTGCCTGCTGTACAGTCACAGTGGAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp TCAGGGTTAGCCTGGAGTACGAACACACGTTCTCCCCATGGCCCAGTCAGCGGCGCAGGCGTGAATCAGTaGTCTCCTCACTGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: SGLAWSTNTRSPHGPVSGAGVNQ*SPHCPA
Trigger: GGCCGGGCAGTGAGGAGAGCACTGATTCACGCCTGC...GCCGCTGACTGGGCCATGGGGAGAACGTGTGTTCGTACTCCAGGCTAACCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR TCA 90 bp TTGCTTCCCCTAGGCCTCACATCAGCGACCCGCACACACCCCGTCTCTGGAGAATGTGCAAGTGAGCAGTaGGGACGGGGGCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LLPLGLTSATRTHPVSGECASEQ*GRGLCS
Trigger: AGAGCAGAGCCCCCGTCCTCACTGCTCACTTGCACA...TTCTCCAGAGACGGGGTGTGTGCGGGTCGCTGATGTGAGGCCTAGGGGAAGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR TCA 90 bp CTGGGGGAGAGAGTGGGGTGTGCGTGCTGTAGAAGATGGATGGCTGCGTGGCCAGGTGGACGAGGTCTCTaGGGTCATCTAGCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: LGERVGCACCRRWMAAWPGGRGL*GHLAKS
Trigger: GGACTTGGCTAGATGACCTCAGAGACCTCGTCCACC...TGGCCACGCAGCCATCCATCTTCTACAGCACGCACACCCCACTCTCTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR TCA 90 bp TCAGGGTTAGCCTGGAGTACGAACACACGTTCTCCCCATGGCCCAGTCAGCGGCAGATACTGCCCAGCCTaGGAGCAGTATGGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: SGLAWSTNTRSPHGPVSGRYCPA*EQYGPS
Trigger: GCTGGGGCCATACTGCTCTCAGGCTGGGCAGTATCT...GCCGCTGACTGGGCCATGGGGAGAACGTGTGTTCGTACTCCAGGCTAACCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp CTGGGGGAGAGAGTGGGGTGTGCGTGCTGTAGAAGATGGATGGCTGCGTGGCCATGGCAAGGCTCCTGGTaGTCACAGCTTCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: LGERVGCACCRRWMAAWPWQGSW*SQLPGS
Trigger: GGATCCTGGAAGCTGTGAGCACCAGGAGCCTTGCCA...TGGCCACGCAGCCATCCATCTTCTACAGCACGCACACCCCACTCTCTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp TCAGGGTTAGCCTGGAGTACGAACACACGTTCTCCCCATGGCCCAGTCAGCGGCGCTCAGCCCCACCCTTaGTGGGGTAACAGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: SGLAWSTNTRSPHGPVSGAQPHP*WGNRRE
Trigger: TTCCCTCCTGTTACCCCAGCAAGGGTGGGGCTGAGC...GCCGCTGACTGGGCCATGGGGAGAACGTGTGTTCGTACTCCAGGCTAACCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp TTGCTTCCCCTAGGCCTCACATCAGCGACCCGCACACACCCCGTCTCTGGAGAAGCCACCTGGGACAAGTaGACCTGGAGAAGCCGAGTC +
Preference number: 4 (lower is better)
Translates to: LLPLGLTSATRTHPVSGEATWDK*TWRSRV
Trigger: GACTCGGCTTCTCCAGGTGCACTTGTCCCAGGTGGC...TTCTCCAGAGACGGGGTGTGTGCGGGTCGCTGATGTGAGGCCTAGGGGAAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp TTGCTTCCCCTAGGCCTCACATCAGCGACCCGCACACACCCCGTCTCTGGAGAAGGCATTTCAGGGATCTaGAGCACTCCCCCTGACCCC +
Preference number: 4 (lower is better)
Translates to: LLPLGLTSATRTHPVSGEGISGI*STPPDP
Trigger: GGGGTCAGGGGGAGTGCTCCAGATCCCTGAAATGCC...TTCTCCAGAGACGGGGTGTGTGCGGGTCGCTGATGTGAGGCCTAGGGGAAGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR TCA 90 bp TTGCTTCCCCTAGGCCTCACATCAGCGACCCGCACACACCCCGTCTCTGGAGAAGAGCTGTTCACCTTCTaGGCTGCAGGGTTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: LLPLGLTSATRTHPVSGEELFTF*AAGFLA
Trigger: AGCGAGGAACCCTGCAGCTCAGAAGGTGAACAGCTC...TTCTCCAGAGACGGGGTGTGTGCGGGTCGCTGATGTGAGGCCTAGGGGAAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp TCAGGGTTAGCCTGGAGTACGAACACACGTTCTCCCCATGGCCCAGTCAGCGGCCAGCTGCTTACATGCTaGCAAAGCGACCGCGAGGCT +
Preference number: 4 (lower is better)
Translates to: SGLAWSTNTRSPHGPVSGQLLTC*QSDREA
Trigger: AGCCTCGCGGTCGCTTTGGCAGCATGTAAGCAGCTG...GCCGCTGACTGGGCCATGGGGAGAACGTGTGTTCGTACTCCAGGCTAACCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp TCAGGGTTAGCCTGGAGTACGAACACACGTTCTCCCCATGGCCCAGTCAGCGGCTCAGCCCGCACAGCGTaGAAAGGTGGGGAGTTCACT +
Preference number: 4 (lower is better)
Translates to: SGLAWSTNTRSPHGPVSGSARTA*KGGEFT
Trigger: AGTGAACTCCCCACCTTTGCACGCTGTGCGGGCTGA...GCCGCTGACTGGGCCATGGGGAGAACGTGTGTTCGTACTCCAGGCTAACCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp TCTGAGAACCACAATGAAGATACTGCCCAGCCTGAGAGCAGTATGGCCCCAGCCTCTGGCCACCCGGGATaGACAGCAGGCAGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: SENHNEDTAQPESSMAPASGHPG*TAGRWD
Trigger: GTCCCACCTGCCTGCTGTGCATCCCGGGTGGCCAGA...GGCTGGGGCCATACTGCTCTCAGGCTGGGCAGTATCTTCATTGTGGTTCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp CAGGGCCATGCTCCCAGAAGAGAACGGGAATCCTCACGAGAAGCCTGCTACTCAGCTCCAGCAGTCAGTTaGCTTCTCCGCAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: QGHAPRRERESSREACYSAPAVS*LLRSPR
Trigger: CCTGGGGCTGCGGAGAAGCCAACTGACTGCTGGAGC...TGAGTAGCAGGCTTCTCGTGAGGATTCCCGTTCTCTTCTGGGAGCATGGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp CTGGGGGAGAGAGTGGGGTGTGCGTGCTGTAGAAGATGGATGGCTGCGTGGCCACACACACCCCGTCTCTaGAGAAATCCACGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: LGERVGCACCRRWMAAWPHTPRL*RNPRLC
Trigger: GCACAGACGTGGATTTCTCCAGAGACGGGGTGTGTG...TGGCCACGCAGCCATCCATCTTCTACAGCACGCACACCCCACTCTCTCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp TCAGGGTTAGCCTGGAGTACGAACACACGTTCTCCCCATGGCCCAGTCAGCGGCTGGGACAAGTGCACCTaGAGAAGCCGAGTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SGLAWSTNTRSPHGPVSGWDKCT*RSRVWP
Trigger: TGGCCAGACTCGGCTTCTCCAGGTGCACTTGTCCCA...GCCGCTGACTGGGCCATGGGGAGAACGTGTGTTCGTACTCCAGGCTAACCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR CAA 72 bp GCAGTATGGCCCCAGCCCCATGGCTGCCTAAAGCCCTaGAGGTCACCCTCAAGTGGGTTAGTTCCACTAGCC +
Preference number: 4 (lower is better)
Translates to: AVWPQPHGCLKP*RSPSSGLVPLA
Trigger: GGCTAGTGGAACTAACCCACTTGAGGGTGACCTCAAGGGCTTTAGGCAGCCATGGGGCTGGGGCCATACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR TCA 90 bp TCAGGGTTAGCCTGGAGTACGAACACACGTTCTCCCCATGGCCCAGTCAGCGGCTCTGAATCACACCCATaGGTCCCCCGTGCACTTGAC +
Preference number: 4 (lower is better)
Translates to: SGLAWSTNTRSPHGPVSGSESHP*VPRALD
Trigger: GTCAAGTGCACGGGGGACTCATGGGTGTGATTCAGA...GCCGCTGACTGGGCCATGGGGAGAACGTGTGTTCGTACTCCAGGCTAACCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR TCA 90 bp GGAAACCGAGACACACATTCAACAAAGCGCGCATCACATGGGGAGTTCAGGGTTCGGCAACTCCAGCTCTaGGCCCGTTGGCACCCCGCA +
Preference number: 4 (lower is better)
Translates to: GNRDTHSTKRASHGEFRVRQLQL*ARWHPA
Trigger: TGCGGGGTGCCAACGGGCTCAGAGCTGGAGTTGCCG...AACCCTGAACTCCCCATGTGATGCGCGCTTTGTTGAATGTGTGTCTCGGTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR TCA 90 bp TCAGGGTTAGCCTGGAGTACGAACACACGTTCTCCCCATGGCCCAGTCAGCGGCACGGATGCAGAGAAGTaGAGGTGCAGCAGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: SGLAWSTNTRSPHGPVSGTDAEK*RCSRLG
Trigger: TCCAAGCCTGCTGCACCTTCACTTCTCTGCATCCGT...GCCGCTGACTGGGCCATGGGGAGAACGTGTGTTCGTACTCCAGGCTAACCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR TCA 90 bp TCAGGGTTAGCCTGGAGTACGAACACACGTTCTCCCCATGGCCCAGTCAGCGGCATCAAGCCTCTTCTCTaGAAGGCAGCACCAGGGACG +
Preference number: 4 (lower is better)
Translates to: SGLAWSTNTRSPHGPVSGIKPLL*KAAPGT
Trigger: CGTCCCTGGTGCTGCCTTTCAGAGAAGAGGCTTGAT...GCCGCTGACTGGGCCATGGGGAGAACGTGTGTTCGTACTCCAGGCTAACCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp CTGGGGGAGAGAGTGGGGTGTGCGTGCTGTAGAAGATGGATGGCTGCGTGGCCAAAACAGCTGCTTACATaGTGCCAAAGCGACCGCGAG +
Preference number: 4 (lower is better)
Translates to: LGERVGCACCRRWMAAWPKQLLT*CQSDRE
Trigger: CTCGCGGTCGCTTTGGCAGCATGTAAGCAGCTGTTT...TGGCCACGCAGCCATCCATCTTCTACAGCACGCACACCCCACTCTCTCCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp ACACGGGCTTGCATAACAGACTCTTGTACCGCCATCTCTAGCACAAGACCATGGGCACAGGGATCCCGCTaGGGCTCGGCGAAAGCCGGA +
Preference number: 4 (lower is better)
Translates to: TRACITDSCTAISSTRPWAQGSR*GSAKAG
Trigger: TCCGGCTTTCGCCGAGCCGCAGCGGGATCCCTGTGC...CCATGGTCTTGTGCTAGAGATGGCGGTACAAGAGTCTGTTATGCAAGCCCGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp GAAGCATCAAGTCCCAAGGCTGGTTCTGCTGTCAAGGGAATCCCACTAGCTTTAGTAGGCTGCGCCGGGTaGACAGGGATCCCGCTGCGG +
Preference number: 4 (lower is better)
Translates to: EASSPKAGSAVKGIPLALVGCAG*TGIPLR
Trigger: CCGCAGCGGGATCCCTGTGCACCCGGCGCAGCCTAC...TAAAGCTAGTGGGATTCCCTTGACAGCAGAACCAGCCTTGGGACTTGATGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp TCTGAGAACCACAATGAAGATACTGCCCAGCCTGAGAGCAGTATGGCCCCAGCCCAGTGCTCTCCTCACTaGCCGGCCCGCACAGGACTT +
Preference number: 4 (lower is better)
Translates to: SENHNEDTAQPESSMAPAQCSPH*PARTGL
Trigger: AAGTCCTGTGCGGGCCGGGCAGTGAGGAGAGCACTG...GGCTGGGGCCATACTGCTCTCAGGCTGGGCAGTATCTTCATTGTGGTTCTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp CAGGGCCATGCTCCCAGAAGAGAACGGGAATCCTCACGAGAAGCCTGCTACTCACCCCAGCCCCATGGCTaGCTAAAGCCCTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: QGHAPRRERESSREACYSPQPHG*LKPLRS
Trigger: TGACCTCAAGGGCTTTAGGCAGCCATGGGGCTGGGG...TGAGTAGCAGGCTTCTCGTGAGGATTCCCGTTCTCTTCTGGGAGCATGGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp TCAGGGTTAGCCTGGAGTACGAACACACGTTCTCCCCATGGCCCAGTCAGCGGCCCGGGAGGTAGAGGTTaGAGTGGAGCTGAGATTGTG +
Preference number: 4 (lower is better)
Translates to: SGLAWSTNTRSPHGPVSGPGGRG*SGAEIV
Trigger: CACAATCTCAGCTCCACTGCAACCTCTACCTCCCGG...GCCGCTGACTGGGCCATGGGGAGAACGTGTGTTCGTACTCCAGGCTAACCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp TCTGAGAACCACAATGAAGATACTGCCCAGCCTGAGAGCAGTATGGCCCCAGCCGCGAGGCAGTGCACCTaGAGCTGCCCTTCCAGCCTA +
Preference number: 4 (lower is better)
Translates to: SENHNEDTAQPESSMAPAARQCT*SCPSSL
Trigger: TAGGCTGGAAGGGCAGCTGCAGGTGCACTGCCTCGC...GGCTGGGGCCATACTGCTCTCAGGCTGGGCAGTATCTTCATTGTGGTTCTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp CTGGGGGAGAGAGTGGGGTGTGCGTGCTGTAGAAGATGGATGGCTGCGTGGCCAAGAGTGGGGTGTGCGTaGTGTAGAAGATGGATGGCT +
Preference number: 4 (lower is better)
Translates to: LGERVGCACCRRWMAAWPRVGCA*CRRWMA
Trigger: AGCCATCCATCTTCTACAGCACGCACACCCCACTCT...TGGCCACGCAGCCATCCATCTTCTACAGCACGCACACCCCACTCTCTCCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp CTGGGGGAGAGAGTGGGGTGTGCGTGCTGTAGAAGATGGATGGCTGCGTGGCCAGCACTTGACCCACCATaGCATAATAGCCATCGCTGG +
Preference number: 4 (lower is better)
Translates to: LGERVGCACCRRWMAAWPALDPP*HNSHRW
Trigger: CCAGCGATGGCTATTATGCCATGGTGGGTCAAGTGC...TGGCCACGCAGCCATCCATCTTCTACAGCACGCACACCCCACTCTCTCCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp TTGCTTCCCCTAGGCCTCACATCAGCGACCCGCACACACCCCGTCTCTGGAGAACGGCTCCTGTCCTTGTaGTTCCCCACGATCATCTTG +
Preference number: 4 (lower is better)
Translates to: LLPLGLTSATRTHPVSGERLLSL*FPTIIL
Trigger: CAAGATGATCGTGGGGAACCACAAGGACAGGAGCCG...TTCTCCAGAGACGGGGTGTGTGCGGGTCGCTGATGTGAGGCCTAGGGGAAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp TCAGGGTTAGCCTGGAGTACGAACACACGTTCTCCCCATGGCCCAGTCAGCGGCTACAGCAGGCACCAGTaGCCGACTCTTTTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: SGLAWSTNTRSPHGPVSGYSRHQ*PTLFLW
Trigger: CCACAGGAAAAGAGTCGGCCACTGGTGCCTGCTGTA...GCCGCTGACTGGGCCATGGGGAGAACGTGTGTTCGTACTCCAGGCTAACCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp TGCCTCCACTGTGACTGTACAGCAGGCACCAGTGGCCGACTCTTTTCCTGTGGTCCAAGTGAGGGCTGGTaGGGCATGAATGGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: CLHCDCTAGTSGRLFSCGPSEGW*GMNGEL
Trigger: CAGCTCCCCATTCATGCCCCACCAGCCCTCACTTGG...ACCACAGGAAAAGAGTCGGCCACTGGTGCCTGCTGTACAGTCACAGTGGAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR TCA 90 bp TCTGAGAACCACAATGAAGATACTGCCCAGCCTGAGAGCAGTATGGCCCCAGCCAGCATGGGTCCCAAGTaGGGGCTGGTGGGGCATGAA +
Preference number: 4 (lower is better)
Translates to: SENHNEDTAQPESSMAPASMGPK*GLVGHE
Trigger: TTCATGCCCCACCAGCCCTCACTTGGGACCCATGCT...GGCTGGGGCCATACTGCTCTCAGGCTGGGCAGTATCTTCATTGTGGTTCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR TCA 90 bp TCAGGGTTAGCCTGGAGTACGAACACACGTTCTCCCCATGGCCCAGTCAGCGGCACGTTTCTGCAGGCGTaGATCAGTGCTCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: SGLAWSTNTRSPHGPVSGTFLQA*ISALLT
Trigger: AGTGAGGAGAGCACTGATTCACGCCTGCAGAAACGT...GCCGCTGACTGGGCCATGGGGAGAACGTGTGTTCGTACTCCAGGCTAACCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR TCA 90 bp TTGCTTCCCCTAGGCCTCACATCAGCGACCCGCACACACCCCGTCTCTGGAGAAACCAGGGACGGATTCTaGCACGGTGAAGCATCAAGT +
Preference number: 4 (lower is better)
Translates to: LLPLGLTSATRTHPVSGETRDGF*HGEASS
Trigger: ACTTGATGCTTCACCGTGTCAGAATCCGTCCCTGGT...TTCTCCAGAGACGGGGTGTGTGCGGGTCGCTGATGTGAGGCCTAGGGGAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR TCA 90 bp CCTGTCATGGTAGGTGATGATGGCTGTCAGCGCTCGCACGCAGATCCGGTAACAGGACCAGAGTTCACCTaGGCGGCAGCAGAAAGCAGT +
Preference number: 4 (lower is better)
Translates to: PVMVGDDGCQRSHADPVTGPEFT*AAAESS
Trigger: ACTGCTTTCTGCTGCCGCTCAGGTGAACTCTGGTCC...TGTTACCGGATCTGCGTGCGAGCGCTGACAGCCATCATCACCTACCATGACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521806.5
CDS-3UTR GCA 90 bp TCTGAGAACCACAATGAAGATACTGCCCAGCCTGAGAGCAGTATGGCCCCAGCCACGGGGGCTCTGCTCTaGTGTCCTGATGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: SENHNEDTAQPESSMAPATGALL*CPDAAS
Trigger: GGAAGCAGCATCAGGACAGCAGAGCAGAGCCCCCGT...GGCTGGGGCCATACTGCTCTCAGGCTGGGCAGTATCTTCATTGTGGTTCTCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp TGCCTCCACTGTGACTGTACAGCAGGCACCAGTGGCCGACTCTTTTCCTGTGGTGCCACAGGAGGCAACTaGAAACGCCAGGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: CLHCDCTAGTSGRLFSCGATGGN*KRQVSP
Trigger: TGGAGAGACCTGGCGTTTGCAGTTGCCTCCTGTGGC...ACCACAGGAAAAGAGTCGGCCACTGGTGCCTGCTGTACAGTCACAGTGGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp CTGGGGGAGAGAGTGGGGTGTGCGTGCTGTAGAAGATGGATGGCTGCGTGGCCATCCCCACGATCATCTTaGTGTACAGCTTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LGERVGCACCRRWMAAWPSPRSS*CTASAA
Trigger: AGCAGCAGAAGCTGTACAGCAAGATGATCGTGGGGA...TGGCCACGCAGCCATCCATCTTCTACAGCACGCACACCCCACTCTCTCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp TCAGGGTTAGCCTGGAGTACGAACACACGTTCTCCCCATGGCCCAGTCAGCGGCCCTGGCACACGGGCTTaGATAACAGACTCTTGTACC +
Preference number: 4 (lower is better)
Translates to: SGLAWSTNTRSPHGPVSGPGTRA*ITDSCT
Trigger: GGTACAAGAGTCTGTTATGCAAGCCCGTGTGCCAGG...GCCGCTGACTGGGCCATGGGGAGAACGTGTGTTCGTACTCCAGGCTAACCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp CAGGGCCATGCTCCCAGAAGAGAACGGGAATCCTCACGAGAAGCCTGCTACTCAGTTCACCTTCTGAGCTaGAGGGTTCCTCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QGHAPRRERESSREACYSVHLLS*RVPRSS
Trigger: GCTGGAGCGAGGAACCCTGCAGCTCAGAAGGTGAAC...TGAGTAGCAGGCTTCTCGTGAGGATTCCCGTTCTCTTCTGGGAGCATGGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp TCAGGGTTAGCCTGGAGTACGAACACACGTTCTCCCCATGGCCCAGTCAGCGGCGGGAGGTTACGTTTCTaGAGGCGTGAATCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: SGLAWSTNTRSPHGPVSGGRLRF*RRESVL
Trigger: GAGCACTGATTCACGCCTGCAGAAACGTAACCTCCC...GCCGCTGACTGGGCCATGGGGAGAACGTGTGTTCGTACTCCAGGCTAACCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp TCAGGGTTAGCCTGGAGTACGAACACACGTTCTCCCCATGGCCCAGTCAGCGGCGACTCAGGAGACGGATaGAGAGAAGTGAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SGLAWSTNTRSPHGPVSGDSGDG*REVKVQ
Trigger: CTGCACCTTCACTTCTCTGCATCCGTCTCCTGAGTC...GCCGCTGACTGGGCCATGGGGAGAACGTGTGTTCGTACTCCAGGCTAACCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp TTGCTTCCCCTAGGCCTCACATCAGCGACCCGCACACACCCCGTCTCTGGAGAATCCCAAGGCTGGTTCTaGTGTCAAGGGAATCCCACT +
Preference number: 4 (lower is better)
Translates to: LLPLGLTSATRTHPVSGESQGWF*CQGNPT
Trigger: AGTGGGATTCCCTTGACAGCAGAACCAGCCTTGGGA...TTCTCCAGAGACGGGGTGTGTGCGGGTCGCTGATGTGAGGCCTAGGGGAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp ACACGGGCTTGCATAACAGACTCTTGTACCGCCATCTCTAGCACAAGACCATGGCTGTCCGCGAGGCAGTaGACCTGCAGCTGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: TRACITDSCTAISSTRPWLSARQ*TCSCPS
Trigger: GGAAGGGCAGCTGCAGGTGCACTGCCTCGCGGACAG...CCATGGTCTTGTGCTAGAGATGGCGGTACAAGAGTCTGTTATGCAAGCCCGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp CTGGGGGAGAGAGTGGGGTGTGCGTGCTGTAGAAGATGGATGGCTGCGTGGCCATCGGTGAGGTATGATTaGCCACACAGATGCCACCAT +
Preference number: 4 (lower is better)
Translates to: LGERVGCACCRRWMAAWPSVRYD*PHRCHH
Trigger: ATGGTGGCATCTGTGTGGCCAATCATACCTCACCGA...TGGCCACGCAGCCATCCATCTTCTACAGCACGCACACCCCACTCTCTCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp GAAGCATCAAGTCCCAAGGCTGGTTCTGCTGTCAAGGGAATCCCACTAGCTTTATTCCTGGAGAGCGGGTaGCCGCCCCCAGCACATCCC +
Preference number: 4 (lower is better)
Translates to: EASSPKAGSAVKGIPLALFLESG*PPPAHP
Trigger: GGGATGTGCTGGGGGCGGCCACCCGCTCTCCAGGAA...TAAAGCTAGTGGGATTCCCTTGACAGCAGAACCAGCCTTGGGACTTGATGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp CAGGGCCATGCTCCCAGAAGAGAACGGGAATCCTCACGAGAAGCCTGCTACTCACTGTGGTGCCTGCTCTaGCTGTGCAGAAGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: QGHAPRRERESSREACYSLWCLL*LCRSCH
Trigger: ATGGCAGCTTCTGCACAGCCAGAGCAGGCACCACAG...TGAGTAGCAGGCTTCTCGTGAGGATTCCCGTTCTCTTCTGGGAGCATGGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp TTGCTTCCCCTAGGCCTCACATCAGCGACCCGCACACACCCCGTCTCTGGAGAAGTACCACATGCAAAGTaGATCTGTCTGCAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LLPLGLTSATRTHPVSGEVPHAK*ICLQPQ
Trigger: CTGGGGCTGCAGACAGATCCACTTTGCATGTGGTAC...TTCTCCAGAGACGGGGTGTGTGCGGGTCGCTGATGTGAGGCCTAGGGGAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp TTGCTTCCCCTAGGCCTCACATCAGCGACCCGCACACACCCCGTCTCTGGAGAAGAGGTCACCCTCAAGTaGGTTAGTTCCACTAGCCCT +
Preference number: 4 (lower is better)
Translates to: LLPLGLTSATRTHPVSGEEVTLK*VSSTSP
Trigger: AGGGCTAGTGGAACTAACCCACTTGAGGGTGACCTC...TTCTCCAGAGACGGGGTGTGTGCGGGTCGCTGATGTGAGGCCTAGGGGAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp TTGCTTCCCCTAGGCCTCACATCAGCGACCCGCACACACCCCGTCTCTGGAGAAGCGTGCTGTAGAAGATaGATGGCTGCGTGGCCATAT +
Preference number: 4 (lower is better)
Translates to: LLPLGLTSATRTHPVSGEACCRR*MAAWPY
Trigger: ATATGGCCACGCAGCCATCCATCTTCTACAGCACGC...TTCTCCAGAGACGGGGTGTGTGCGGGTCGCTGATGTGAGGCCTAGGGGAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR TCA 90 bp TCTGAGAACCACAATGAAGATACTGCCCAGCCTGAGAGCAGTATGGCCCCAGCCGAGTTTCTGTGCAAGTaGGCAGTGAGGACGGGGGCT +
Preference number: 4 (lower is better)
Translates to: SENHNEDTAQPESSMAPAEFLCK*AVRTGA
Trigger: AGCCCCCGTCCTCACTGCTCACTTGCACAGAAACTC...GGCTGGGGCCATACTGCTCTCAGGCTGGGCAGTATCTTCATTGTGGTTCTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR TCA 90 bp TTGCTTCCCCTAGGCCTCACATCAGCGACCCGCACACACCCCGTCTCTGGAGAAAGATCTGCAAGCATCTaGGACGAGCTGTTCACCTTC +
Preference number: 4 (lower is better)
Translates to: LLPLGLTSATRTHPVSGERSASI*DELFTF
Trigger: GAAGGTGAACAGCTCGTCTCAGATGCTTGCAGATCT...TTCTCCAGAGACGGGGTGTGTGCGGGTCGCTGATGTGAGGCCTAGGGGAAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp TTCCCTGTCATGGTAGGTGATGATGGCTGTCAGCGCTCGCACGCAGATCCGGTAGGCCAGGCCAGCACCTaGCTCCCTAAGAACAAATTG +
Preference number: 4 (lower is better)
Translates to: FPVMVGDDGCQRSHADPVGQAST*LPKNKL
Trigger: CAATTTGTTCTTAGGGAGGCAGGTGCTGGCCTGGCC...TACCGGATCTGCGTGCGAGCGCTGACAGCCATCATCACCTACCATGACAGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521806.5
CDS-3UTR GCA 90 bp CTGGGGGAGAGAGTGGGGTGTGCGTGCTGTAGAAGATGGATGGCTGCGTGGCCAGATTGGCCACACAGATaGCACCATTTCTTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: LGERVGCACCRRWMAAWPDWPHR*HHFLVC
Trigger: ACAGACCAAGAAATGGTGGCATCTGTGTGGCCAATC...TGGCCACGCAGCCATCCATCTTCTACAGCACGCACACCCCACTCTCTCCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp TTGCTTCCCCTAGGCCTCACATCAGCGACCCGCACACACCCCGTCTCTGGAGAAGACAGCATCTTCATCTaGCTCTCTAGTCATGGGAGG +
Preference number: 4 (lower is better)
Translates to: LLPLGLTSATRTHPVSGEDSIFI*LSSHGR
Trigger: CCTCCCATGACTAGAGAGGCAGATGAAGATGCTGTC...TTCTCCAGAGACGGGGTGTGTGCGGGTCGCTGATGTGAGGCCTAGGGGAAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp CTGGGGGAGAGAGTGGGGTGTGCGTGCTGTAGAAGATGGATGGCTGCGTGGCCACTAATAGGAAATCAATaGAGCTGGCCGGCCAGAATG +
Preference number: 4 (lower is better)
Translates to: LGERVGCACCRRWMAAWPLIGNQ*SWPARM
Trigger: CATTCTGGCCGGCCAGCTGCATTGATTTCCTATTAG...TGGCCACGCAGCCATCCATCTTCTACAGCACGCACACCCCACTCTCTCCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp TCTGAGAACCACAATGAAGATACTGCCCAGCCTGAGAGCAGTATGGCCCCAGCCCTCTGGCAAGGCTCCTaGTGCTCACAGCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SENHNEDTAQPESSMAPALWQGS*CSQLPG
Trigger: TCCTGGAAGCTGTGAGCACCAGGAGCCTTGCCAGAG...GGCTGGGGCCATACTGCTCTCAGGCTGGGCAGTATCTTCATTGTGGTTCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp GAAGCATCAAGTCCCAAGGCTGGTTCTGCTGTCAAGGGAATCCCACTAGCTTTACACACGTTCTCCCCATaGCCCAGTCAGCGGCCCACC +
Preference number: 4 (lower is better)
Translates to: EASSPKAGSAVKGIPLALHTFSP*PSQRPT
Trigger: GGTGGGCCGCTGACTGGGCCATGGGGAGAACGTGTG...TAAAGCTAGTGGGATTCCCTTGACAGCAGAACCAGCCTTGGGACTTGATGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp CTGGGGGAGAGAGTGGGGTGTGCGTGCTGTAGAAGATGGATGGCTGCGTGGCCAAGTTCAGGGTTAGCCTaGAGTACGAACACACGTTCT +
Preference number: 4 (lower is better)
Translates to: LGERVGCACCRRWMAAWPSSGLA*STNTRS
Trigger: AGAACGTGTGTTCGTACTCCAGGCTAACCCTGAACT...TGGCCACGCAGCCATCCATCTTCTACAGCACGCACACCCCACTCTCTCCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp GGAAACCGAGACACACATTCAACAAAGCGCGCATCACATGGGGAGTTCAGGGTTTGCCACGAGGGAGCATaGGTCCCAAGTGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GNRDTHSTKRASHGEFRVCHEGA*VPSEGW
Trigger: CCAGCCCTCACTTGGGACCCATGCTCCCTCGTGGCA...AACCCTGAACTCCCCATGTGATGCGCGCTTTGTTGAATGTGTGTCTCGGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp CTGGGGGAGAGAGTGGGGTGTGCGTGCTGTAGAAGATGGATGGCTGCGTGGCCAGATGGAGCAGTCGCCTaGATGATGGTAAAAGGCATA +
Preference number: 4 (lower is better)
Translates to: LGERVGCACCRRWMAAWPDGAVA*MMVKGI
Trigger: TATGCCTTTTACCATCATCCAGGCGACTGCTCCATC...TGGCCACGCAGCCATCCATCTTCTACAGCACGCACACCCCACTCTCTCCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp TCAGGGTTAGCCTGGAGTACGAACACACGTTCTCCCCATGGCCCAGTCAGCGGCGTGAAGGTCACACGATaGCACCCAAAAATGCCTGTC +
Preference number: 4 (lower is better)
Translates to: SGLAWSTNTRSPHGPVSGVKVTR*HPKMPV
Trigger: GACAGGCATTTTTGGGTGCCATCGTGTGACCTTCAC...GCCGCTGACTGGGCCATGGGGAGAACGTGTGTTCGTACTCCAGGCTAACCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp GGAAACCGAGACACACATTCAACAAAGCGCGCATCACATGGGGAGTTCAGGGTTACGGACCGGGCCACCTaGGACAAGTGCACCTGGAGA +
Preference number: 4 (lower is better)
Translates to: GNRDTHSTKRASHGEFRVTDRAT*DKCTWR
Trigger: TCTCCAGGTGCACTTGTCCCAGGTGGCCCGGTCCGT...AACCCTGAACTCCCCATGTGATGCGCGCTTTGTTGAATGTGTGTCTCGGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp TCAGGGTTAGCCTGGAGTACGAACACACGTTCTCCCCATGGCCCAGTCAGCGGCGCTGTAGAAGATGGATaGCTGCGTGGCCATATCCTA +
Preference number: 4 (lower is better)
Translates to: SGLAWSTNTRSPHGPVSGAVEDG*LRGHIL
Trigger: TAGGATATGGCCACGCAGCCATCCATCTTCTACAGC...GCCGCTGACTGGGCCATGGGGAGAACGTGTGTTCGTACTCCAGGCTAACCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR TCA 90 bp TCTGAGAACCACAATGAAGATACTGCCCAGCCTGAGAGCAGTATGGCCCCAGCCTCAGATGGTCCTTCCTaGCAGCACCAGCCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: SENHNEDTAQPESSMAPASDGPS*QHQPGK
Trigger: TTTCCCTGGCTGGTGCTGTCAGGAAGGACCATCTGA...GGCTGGGGCCATACTGCTCTCAGGCTGGGCAGTATCTTCATTGTGGTTCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR TCA 90 bp GGAAACCGAGACACACATTCAACAAAGCGCGCATCACATGGGGAGTTCAGGGTTAGCACTGACTCCACGTaGCTTCACACCAGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: GNRDTHSTKRASHGEFRVSTDST*LHTRCG
Trigger: GCCGCACCTGGTGTGAAGTCACGTGGAGTCAGTGCT...AACCCTGAACTCCCCATGTGATGCGCGCTTTGTTGAATGTGTGTCTCGGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp GAAGCATCAAGTCCCAAGGCTGGTTCTGCTGTCAAGGGAATCCCACTAGCTTTAAGCTCAGGCCTGCCGTaGCCCGTTTTGTGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: EASSPKAGSAVKGIPLALSSGLP*PVLWAC
Trigger: ACAGGCCCACAAAACGGGGCACGGCAGGCCTGAGCT...TAAAGCTAGTGGGATTCCCTTGACAGCAGAACCAGCCTTGGGACTTGATGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp GGAAACCGAGACACACATTCAACAAAGCGCGCATCACATGGGGAGTTCAGGGTTACCCACTCCCTGAACTaGAGGCCAGAGGGCGACCTT +
Preference number: 4 (lower is better)
Translates to: GNRDTHSTKRASHGEFRVTHSLN*RPEGDL
Trigger: AAGGTCGCCCTCTGGCCTGCAGTTCAGGGAGTGGGT...AACCCTGAACTCCCCATGTGATGCGCGCTTTGTTGAATGTGTGTCTCGGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp TCTGAGAACCACAATGAAGATACTGCCCAGCCTGAGAGCAGTATGGCCCCAGCCCAAAGTGGATCTGTCTaGAGCCCCAGGAGCACAGCT +
Preference number: 4 (lower is better)
Translates to: SENHNEDTAQPESSMAPAQSGSV*SPRSTA
Trigger: AGCTGTGCTCCTGGGGCTGCAGACAGATCCACTTTG...GGCTGGGGCCATACTGCTCTCAGGCTGGGCAGTATCTTCATTGTGGTTCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp TCTGAGAACCACAATGAAGATACTGCCCAGCCTGAGAGCAGTATGGCCCCAGCCGCCCACTGTTTGCTGTaGCGTGAAGGTCACACGATG +
Preference number: 4 (lower is better)
Translates to: SENHNEDTAQPESSMAPAAHCLL*REGHTM
Trigger: CATCGTGTGACCTTCACGGCACAGCAAACAGTGGGC...GGCTGGGGCCATACTGCTCTCAGGCTGGGCAGTATCTTCATTGTGGTTCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp ACACGGGCTTGCATAACAGACTCTTGTACCGCCATCTCTAGCACAAGACCATGGGCAACACACGCCAGGTaGCACCCCTGGCGCAATGAA +
Preference number: 4 (lower is better)
Translates to: TRACITDSCTAISSTRPWATHAR*HPWRNE
Trigger: TTCATTGCGCCAGGGGTGGCACCTGGCGTGTGTTGC...CCATGGTCTTGTGCTAGAGATGGCGGTACAAGAGTCTGTTATGCAAGCCCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp TGCCTCCACTGTGACTGTACAGCAGGCACCAGTGGCCGACTCTTTTCCTGTGGTGGCATTGGTATCCTCTaGACACTCTTCTCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: CLHCDCTAGTSGRLFSCGGIGIL*TLFSRR
Trigger: CCTTCGGGAGAAGAGTGTCCAGAGGATACCAATGCC...ACCACAGGAAAAGAGTCGGCCACTGGTGCCTGCTGTACAGTCACAGTGGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp GGAAACCGAGACACACATTCAACAAAGCGCGCATCACATGGGGAGTTCAGGGTTATGGCCCCAGCCCCATaGCTGCCTAAAGCCCTTGAG +
Preference number: 4 (lower is better)
Translates to: GNRDTHSTKRASHGEFRVMAPAP*LPKALE
Trigger: CTCAAGGGCTTTAGGCAGCCATGGGGCTGGGGCCAT...AACCCTGAACTCCCCATGTGATGCGCGCTTTGTTGAATGTGTGTCTCGGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp CTGGGGGAGAGAGTGGGGTGTGCGTGCTGTAGAAGATGGATGGCTGCGTGGCCAGTAATCTCAGCTACTTaGAGGCTGAGGCAGAAGAAT +
Preference number: 4 (lower is better)
Translates to: LGERVGCACCRRWMAAWPVISAT*RLRQKN
Trigger: ATTCTTCTGCCTCAGCCTCCAAGTAGCTGAGATTAC...TGGCCACGCAGCCATCCATCTTCTACAGCACGCACACCCCACTCTCTCCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp TCAGGGTTAGCCTGGAGTACGAACACACGTTCTCCCCATGGCCCAGTCAGCGGCATTCCAGGAAGGAAATaGCAGGATTCAGAGACCCAG +
Preference number: 4 (lower is better)
Translates to: SGLAWSTNTRSPHGPVSGIPGRK*QDSETQ
Trigger: CTGGGTCTCTGAATCCTGCCATTTCCTTCCTGGAAT...GCCGCTGACTGGGCCATGGGGAGAACGTGTGTTCGTACTCCAGGCTAACCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp CAGGGCCATGCTCCCAGAAGAGAACGGGAATCCTCACGAGAAGCCTGCTACTCAAGATGGATGGCTGCGTaGCCATATCCTAACCTGTCC +
Preference number: 4 (lower is better)
Translates to: QGHAPRRERESSREACYSRWMAA*PYPNLS
Trigger: GGACAGGTTAGGATATGGCCACGCAGCCATCCATCT...TGAGTAGCAGGCTTCTCGTGAGGATTCCCGTTCTCTTCTGGGAGCATGGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR TCA 90 bp TGCCTCCACTGTGACTGTACAGCAGGCACCAGTGGCCGACTCTTTTCCTGTGGTGATCACATCGATCGGTaGGGTATGATTGGCCACACA +
Preference number: 4 (lower is better)
Translates to: CLHCDCTAGTSGRLFSCGDHIDR*GMIGHT
Trigger: TGTGTGGCCAATCATACCTCACCGATCGATGTGATC...ACCACAGGAAAAGAGTCGGCCACTGGTGCCTGCTGTACAGTCACAGTGGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR TCA 90 bp ACACGGGCTTGCATAACAGACTCTTGTACCGCCATCTCTAGCACAAGACCATGGCTGTTTGCTGTGCCGTaGAGGTCACACGATGGCACC +
Preference number: 4 (lower is better)
Translates to: TRACITDSCTAISSTRPWLFAVP*RSHDGT
Trigger: GGTGCCATCGTGTGACCTTCACGGCACAGCAAACAG...CCATGGTCTTGTGCTAGAGATGGCGGTACAAGAGTCTGTTATGCAAGCCCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR TCA 90 bp ACACGGGCTTGCATAACAGACTCTTGTACCGCCATCTCTAGCACAAGACCATGGCGGAGAGAGACATATTaGCTGGGGGAGAGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: TRACITDSCTAISSTRPWRRETY*LGERVG
Trigger: CCCCACTCTCTCCCCCAGTCAATATGTCTCTCTCCG...CCATGGTCTTGTGCTAGAGATGGCGGTACAAGAGTCTGTTATGCAAGCCCGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp TTGCTTCCCCTAGGCCTCACATCAGCGACCCGCACACACCCCGTCTCTGGAGAACCAGAAGGAAAGAGATaGTGGCACACAATGTCTCAT +
Preference number: 4 (lower is better)
Translates to: LLPLGLTSATRTHPVSGEPEGKR*WHTMSH
Trigger: ATGAGACATTGTGTGCCAGCATCTCTTTCCTTCTGG...TTCTCCAGAGACGGGGTGTGTGCGGGTCGCTGATGTGAGGCCTAGGGGAAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp CAGGGCCATGCTCCCAGAAGAGAACGGGAATCCTCACGAGAAGCCTGCTACTCATTGCTGTACAGCTTCTaGTGCTCCTCCTTGAACGTG +
Preference number: 4 (lower is better)
Translates to: QGHAPRRERESSREACYSLLYSF*CSSLNV
Trigger: CACGTTCAAGGAGGAGCAGCAGAAGCTGTACAGCAA...TGAGTAGCAGGCTTCTCGTGAGGATTCCCGTTCTCTTCTGGGAGCATGGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp ACACGGGCTTGCATAACAGACTCTTGTACCGCCATCTCTAGCACAAGACCATGGACAGTGCCTCAGCTGTaGCTTTCCTGGAGAGCGGGT +
Preference number: 4 (lower is better)
Translates to: TRACITDSCTAISSTRPWTVPQL*LSWRAG
Trigger: ACCCGCTCTCCAGGAAAGGCACAGCTGAGGCACTGT...CCATGGTCTTGTGCTAGAGATGGCGGTACAAGAGTCTGTTATGCAAGCCCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp GGAAACCGAGACACACATTCAACAAAGCGCGCATCACATGGGGAGTTCAGGGTTTCCTCACGAGAAGCCTaGTACTCAGGGCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: GNRDTHSTKRASHGEFRVSSREA*YSGPQP
Trigger: TGGCTGTGGCCCTGAGTAGCAGGCTTCTCGTGAGGA...AACCCTGAACTCCCCATGTGATGCGCGCTTTGTTGAATGTGTGTCTCGGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp TGCCTCCACTGTGACTGTACAGCAGGCACCAGTGGCCGACTCTTTTCCTGTGGTGATGGCACCCAAAAATaGCTGTCACTGGTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: CLHCDCTAGTSGRLFSCGDGTQK*LSLVWE
Trigger: TTCCCAGACCAGTGACAGGCATTTTTGGGTGCCATC...ACCACAGGAAAAGAGTCGGCCACTGGTGCCTGCTGTACAGTCACAGTGGAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp TCTGAGAACCACAATGAAGATACTGCCCAGCCTGAGAGCAGTATGGCCCCAGCCCAGGATCCTCCTACCTaGAGAGCTACAGTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: SENHNEDTAQPESSMAPAQDPPT*RATVFA
Trigger: GGCAAAGACTGTAGCTCTCCAGGTAGGAGGATCCTG...GGCTGGGGCCATACTGCTCTCAGGCTGGGCAGTATCTTCATTGTGGTTCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp CAGGGCCATGCTCCCAGAAGAGAACGGGAATCCTCACGAGAAGCCTGCTACTCAGCATCCGAGTCCAGATaGAGTTTCTGTGCAAGTGAG +
Preference number: 4 (lower is better)
Translates to: QGHAPRRERESSREACYSASESR*SFCASE
Trigger: CTCACTTGCACAGAAACTCCATCTGGACTCGGATGC...TGAGTAGCAGGCTTCTCGTGAGGATTCCCGTTCTCTTCTGGGAGCATGGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp TGCCTCCACTGTGACTGTACAGCAGGCACCAGTGGCCGACTCTTTTCCTGTGGTATTGCAGCCTTCAGATaGTCCTTCCTGACAGCACCA +
Preference number: 4 (lower is better)
Translates to: CLHCDCTAGTSGRLFSCGIAAFR*SFLTAP
Trigger: TGGTGCTGTCAGGAAGGACCATCTGAAGGCTGCAAT...ACCACAGGAAAAGAGTCGGCCACTGGTGCCTGCTGTACAGTCACAGTGGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp TCAGGGTTAGCCTGGAGTACGAACACACGTTCTCCCCATGGCCCAGTCAGCGGCTCCCTAACTGGTGGGTaGAAAGTCTCATGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: SGLAWSTNTRSPHGPVSGSLTGG*KVSCLS
Trigger: ACTCAAACATGAGACTTTCCACCCACCAGTTAGGGA...GCCGCTGACTGGGCCATGGGGAGAACGTGTGTTCGTACTCCAGGCTAACCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp GGAAACCGAGACACACATTCAACAAAGCGCGCATCACATGGGGAGTTCAGGGTTGACTGGGGGAGAGAGTaGGGTGTGCGTGCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: GNRDTHSTKRASHGEFRVDWGRE*GVRAVE
Trigger: TTCTACAGCACGCACACCCCACTCTCTCCCCCAGTC...AACCCTGAACTCCCCATGTGATGCGCGCTTTGTTGAATGTGTGTCTCGGTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp GAAGCATCAAGTCCCAAGGCTGGTTCTGCTGTCAAGGGAATCCCACTAGCTTTAGCCAGGTGCCACCCCTaGCGCAATGAAAAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: EASSPKAGSAVKGIPLALARCHP*RNEKFP
Trigger: GGGGAACTTTTCATTGCGCCAGGGGTGGCACCTGGC...TAAAGCTAGTGGGATTCCCTTGACAGCAGAACCAGCCTTGGGACTTGATGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR TCA 90 bp GGAAACCGAGACACACATTCAACAAAGCGCGCATCACATGGGGAGTTCAGGGTTCACCCTTCAACCGCCTaGATAGAAGGCCTGGGAACA +
Preference number: 4 (lower is better)
Translates to: GNRDTHSTKRASHGEFRVHPSTA*IEGLGT
Trigger: TGTTCCCAGGCCTTCTATTCAGGCGGTTGAAGGGTG...AACCCTGAACTCCCCATGTGATGCGCGCTTTGTTGAATGTGTGTCTCGGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR TCA 90 bp GGAAACCGAGACACACATTCAACAAAGCGCGCATCACATGGGGAGTTCAGGGTTCGGATTCTGACACGGTaGAGCATCAAGTCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: GNRDTHSTKRASHGEFRVRILTR*SIKSQG
Trigger: GCCTTGGGACTTGATGCTTCACCGTGTCAGAATCCG...AACCCTGAACTCCCCATGTGATGCGCGCTTTGTTGAATGTGTGTCTCGGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp TGCCTCCACTGTGACTGTACAGCAGGCACCAGTGGCCGACTCTTTTCCTGTGGTTTCTTGGCAAACAGCTaGTTACATGCTGCCAAAGCG +
Preference number: 4 (lower is better)
Translates to: CLHCDCTAGTSGRLFSCGFLANS*LHAAKA
Trigger: CGCTTTGGCAGCATGTAAGCAGCTGTTTGCCAAGAA...ACCACAGGAAAAGAGTCGGCCACTGGTGCCTGCTGTACAGTCACAGTGGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp ACACGGGCTTGCATAACAGACTCTTGTACCGCCATCTCTAGCACAAGACCATGGGGCCAGGCCAGCACCTaGCTCCCTAAGAACAAATTG +
Preference number: 4 (lower is better)
Translates to: TRACITDSCTAISSTRPWGQAST*LPKNKL
Trigger: CAATTTGTTCTTAGGGAGGCAGGTGCTGGCCTGGCC...CCATGGTCTTGTGCTAGAGATGGCGGTACAAGAGTCTGTTATGCAAGCCCGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp CAGGGCCATGCTCCCAGAAGAGAACGGGAATCCTCACGAGAAGCCTGCTACTCAGGGTCACTTGGGGCTTaGAGGACCCCTAATTTAAAA +
Preference number: 4 (lower is better)
Translates to: QGHAPRRERESSREACYSGSLGA*RTPNLK
Trigger: TTTTAAATTAGGGGTCCTGCAAGCCCCAAGTGACCC...TGAGTAGCAGGCTTCTCGTGAGGATTCCCGTTCTCTTCTGGGAGCATGGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp ATTTCTTGGTCTGTTTTCCCTGTCATGGTAGGTGATGATGGCTGTCAGCGCTCGCCCTGTGAAAGCCAGTaGTATCCTGGGACCTGGACC +
Preference number: 4 (lower is better)
Translates to: ISWSVFPVMVGDDGCQRSPCESQ*YPGTWT
Trigger: GGTCCAGGTCCCAGGATAGCACTGGCTTTCACAGGG...CGAGCGCTGACAGCCATCATCACCTACCATGACAGGGAAAACAGACCAAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521806.5
CDS-3UTR CCA 90 bp TGCCTCCACTGTGACTGTACAGCAGGCACCAGTGGCCGACTCTTTTCCTGTGGTTTCTTAGCAGTGACCTaGGTTCTTGGCAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: CLHCDCTAGTSGRLFSCGFLAVT*VLGKQL
Trigger: CAGCTGTTTGCCAAGAACCCAGGTCACTGCTAAGAA...ACCACAGGAAAAGAGTCGGCCACTGGTGCCTGCTGTACAGTCACAGTGGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp TTGCTTCCCCTAGGCCTCACATCAGCGACCCGCACACACCCCGTCTCTGGAGAACCTAATTTAAAAGGATaGAGCAGTCGCCTGGATGAT +
Preference number: 4 (lower is better)
Translates to: LLPLGLTSATRTHPVSGEPNLKG*SSRLDD
Trigger: ATCATCCAGGCGACTGCTCCATCCTTTTAAATTAGG...TTCTCCAGAGACGGGGTGTGTGCGGGTCGCTGATGTGAGGCCTAGGGGAAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396987.7
3UTR CAA 72 bp AGATTTCCACAGGACAACAGGGTTAGTGCCCACTGTTaGCTGTGCCGTGAAGGTCACACGATGGCACCCAAA +
Preference number: 4 (lower is better)
Translates to: RFPQDNRVSAHC*LCREGHTMAPK
Trigger: TTTGGGTGCCATCGTGTGACCTTCACGGCACAGCAAACAGTGGGCACTAACCCTGTTGTCCTGTGGAAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR TCA 90 bp CCTGTCATGGTAGGTGATGATGGCTGTCAGCGCTCGCACGCAGATCCGGTAACAAGATGCCCAGAAGGTTaGCAATCAGGCTATCAAAAG +
Preference number: 4 (lower is better)
Translates to: PVMVGDDGCQRSHADPVTRCPEG*QSGYQK
Trigger: CTTTTGATAGCCTGATTGTCAACCTTCTGGGCATCT...TGTTACCGGATCTGCGTGCGAGCGCTGACAGCCATCATCACCTACCATGACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521806.5
CDS-3UTR TCA 90 bp ACACGGGCTTGCATAACAGACTCTTGTACCGCCATCTCTAGCACAAGACCATGGTCGATCGGTGAGGTATaGTTGGCCACACAGATGCCA +
Preference number: 4 (lower is better)
Translates to: TRACITDSCTAISSTRPWSIGEV*LATQMP
Trigger: TGGCATCTGTGTGGCCAATCATACCTCACCGATCGA...CCATGGTCTTGTGCTAGAGATGGCGGTACAAGAGTCTGTTATGCAAGCCCGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR TCA 90 bp GAAGCATCAAGTCCCAAGGCTGGTTCTGCTGTCAAGGGAATCCCACTAGCTTTATTCCCTCCACAGCACTaGCTCCACGTGACTTCACAC +
Preference number: 4 (lower is better)
Translates to: EASSPKAGSAVKGIPLALFPPQH*LHVTSH
Trigger: GTGTGAAGTCACGTGGAGTCAGTGCTGTGGAGGGAA...TAAAGCTAGTGGGATTCCCTTGACAGCAGAACCAGCCTTGGGACTTGATGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp TGCCTCCACTGTGACTGTACAGCAGGCACCAGTGGCCGACTCTTTTCCTGTGGTGAGAGCTACAGTCTTTaGCAGAAGGAAAGAGATGCT +
Preference number: 4 (lower is better)
Translates to: CLHCDCTAGTSGRLFSCGESYSL*QKERDA
Trigger: AGCATCTCTTTCCTTCTGGCAAAGACTGTAGCTCTC...ACCACAGGAAAAGAGTCGGCCACTGGTGCCTGCTGTACAGTCACAGTGGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp TTGCTTCCCCTAGGCCTCACATCAGCGACCCGCACACACCCCGTCTCTGGAGAATTTACATGGTTTTCCTaGCCAAGAGCATTCAACAGA +
Preference number: 4 (lower is better)
Translates to: LLPLGLTSATRTHPVSGEFTWFS*PRAFNR
Trigger: TCTGTTGAATGCTCTTGGGCAGGAAAACCATGTAAA...TTCTCCAGAGACGGGGTGTGTGCGGGTCGCTGATGTGAGGCCTAGGGGAAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp ACACGGGCTTGCATAACAGACTCTTGTACCGCCATCTCTAGCACAAGACCATGGTCCACAAGTCCTCCCTaGCTGGCAATGGCAGATTTC +
Preference number: 4 (lower is better)
Translates to: TRACITDSCTAISSTRPWSTSPP*LAMADF
Trigger: GAAATCTGCCATTGCCAGGCAGGGAGGACTTGTGGA...CCATGGTCTTGTGCTAGAGATGGCGGTACAAGAGTCTGTTATGCAAGCCCGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp ACACGGGCTTGCATAACAGACTCTTGTACCGCCATCTCTAGCACAAGACCATGGCTGTACAGCTTCTGCTaGTCCTCCTTGAACGTGTCC +
Preference number: 4 (lower is better)
Translates to: TRACITDSCTAISSTRPWLYSFC*SSLNVS
Trigger: GGACACGTTCAAGGAGGAGCAGCAGAAGCTGTACAG...CCATGGTCTTGTGCTAGAGATGGCGGTACAAGAGTCTGTTATGCAAGCCCGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp TGCCTCCACTGTGACTGTACAGCAGGCACCAGTGGCCGACTCTTTTCCTGTGGTAGATGCATCTGGCATTaGTATCCTCTGGACACTCTT +
Preference number: 4 (lower is better)
Translates to: CLHCDCTAGTSGRLFSCGRCIWH*YPLDTL
Trigger: AAGAGTGTCCAGAGGATACCAATGCCAGATGCATCT...ACCACAGGAAAAGAGTCGGCCACTGGTGCCTGCTGTACAGTCACAGTGGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp TCTGAGAACCACAATGAAGATACTGCCCAGCCTGAGAGCAGTATGGCCCCAGCCAACTCCAGATGCATCTaGCATTGGTATCCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: SENHNEDTAQPESSMAPANSRCI*HWYPLD
Trigger: GTCCAGAGGATACCAATGCCAGATGCATCTGGAGTT...GGCTGGGGCCATACTGCTCTCAGGCTGGGCAGTATCTTCATTGTGGTTCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp CAGGGCCATGCTCCCAGAAGAGAACGGGAATCCTCACGAGAAGCCTGCTACTCATCCAGAGGTTTTACATaGTTTTCCTGCCCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: QGHAPRRERESSREACYSSRGFT*FSCPRA
Trigger: TGCTCTTGGGCAGGAAAACCATGTAAAACCTCTGGA...TGAGTAGCAGGCTTCTCGTGAGGATTCCCGTTCTCTTCTGGGAGCATGGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp ACACGGGCTTGCATAACAGACTCTTGTACCGCCATCTCTAGCACAAGACCATGGGGTGGTTCTTCTCCTTaGCTCCTCGCTCCATTCTCA +
Preference number: 4 (lower is better)
Translates to: TRACITDSCTAISSTRPWGGSSP*LLAPFS
Trigger: TGAGAATGGAGCGAGGAGCCAAGGAGAAGAACCACC...CCATGGTCTTGTGCTAGAGATGGCGGTACAAGAGTCTGTTATGCAAGCCCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp CAGGGCCATGCTCCCAGAAGAGAACGGGAATCCTCACGAGAAGCCTGCTACTCACTTAAACCTCCCATTTaGCAAGTATCCCACCACAGT +
Preference number: 4 (lower is better)
Translates to: QGHAPRRERESSREACYSLKPPI*QVSHHS
Trigger: ACTGTGGTGGGATACTTGCCAAATGGGAGGTTTAAG...TGAGTAGCAGGCTTCTCGTGAGGATTCCCGTTCTCTTCTGGGAGCATGGCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp ACACGGGCTTGCATAACAGACTCTTGTACCGCCATCTCTAGCACAAGACCATGGGTGGGACCTATGACATaGGGGGATCCTTCATGCATC +
Preference number: 4 (lower is better)
Translates to: TRACITDSCTAISSTRPWVGPMT*GDPSCI
Trigger: GATGCATGAAGGATCCCCCCATGTCATAGGTCCCAC...CCATGGTCTTGTGCTAGAGATGGCGGTACAAGAGTCTGTTATGCAAGCCCGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR TCA 90 bp ACTCATGAACTCCTTAAACCTCCCATTTGGCAAGTATCCCACCACAGTTGTGCCTCAGATGGTCCTTCCTaGCAGCACCAGCCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: THELLKPPIWQVSHHSCASDGPS*QHQPGK
Trigger: TTTCCCTGGCTGGTGCTGTCAGGAAGGACCATCTGA...GGCACAACTGTGGTGGGATACTTGCCAAATGGGAGGTTTAAGGAGTTCATGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521806.5
CDS-3UTR TCA 90 bp GGAAACCGAGACACACATTCAACAAAGCGCGCATCACATGGGGAGTTCAGGGTTTGGGATCCTTTGCAATaGTTCCGTTGGTGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: GNRDTHSTKRASHGEFRVWDPLQ*FRWCRA
Trigger: AGCCCTACACCAACGGAATCATTGCAAAGGATCCCA...AACCCTGAACTCCCCATGTGATGCGCGCTTTGTTGAATGTGTGTCTCGGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR TCA 90 bp TCAGGGTTAGCCTGGAGTACGAACACACGTTCTCCCCATGGCCCAGTCAGCGGCTTTTCAGTCTTCATTTaGGAGCAAAAAGATTTCCCC +
Preference number: 4 (lower is better)
Translates to: SGLAWSTNTRSPHGPVSGFSVFI*EQKDFP
Trigger: GGGGAAATCTTTTTGCTCTCAAATGAAGACTGAAAA...GCCGCTGACTGGGCCATGGGGAGAACGTGTGTTCGTACTCCAGGCTAACCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR TCA 90 bp CAGGGCCATGCTCCCAGAAGAGAACGGGAATCCTCACGAGAAGCCTGCTACTCACAATGGATTCAAAGCTaGCTTCCCGTATTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: QGHAPRRERESSREACYSQWIQS*LPVFPN
Trigger: GTTTGGAAATACGGGAAGTCAGCTTTGAATCCATTG...TGAGTAGCAGGCTTCTCGTGAGGATTCCCGTTCTCTTCTGGGAGCATGGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp CCTGTCATGGTAGGTGATGATGGCTGTCAGCGCTCGCACGCAGATCCGGTAACATCCCTAAGAACAAATTaGAGCCTTCAGATGGTCCTT +
Preference number: 4 (lower is better)
Translates to: PVMVGDDGCQRSHADPVTSLRTN*SLQMVL
Trigger: AAGGACCATCTGAAGGCTGCAATTTGTTCTTAGGGA...TGTTACCGGATCTGCGTGCGAGCGCTGACAGCCATCATCACCTACCATGACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521806.5
CDS-3UTR CCA 90 bp TGCCTCCACTGTGACTGTACAGCAGGCACCAGTGGCCGACTCTTTTCCTGTGGTGAAGGAAAGAGATGCTaGCACACAATGTCTCATACT +
Preference number: 4 (lower is better)
Translates to: CLHCDCTAGTSGRLFSCGEGKRC*HTMSHT
Trigger: AGTATGAGACATTGTGTGCCAGCATCTCTTTCCTTC...ACCACAGGAAAAGAGTCGGCCACTGGTGCCTGCTGTACAGTCACAGTGGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp GGAAACCGAGACACACATTCAACAAAGCGCGCATCACATGGGGAGTTCAGGGTTTGGAGGGGTAATCACTaGCACTTCACACAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: GNRDTHSTKRASHGEFRVWRGNH*HFTQKA
Trigger: AGCCTTCTGTGTGAAGTGCCAGTGATTACCCCTCCA...AACCCTGAACTCCCCATGTGATGCGCGCTTTGTTGAATGTGTGTCTCGGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp CAGGGCCATGCTCCCAGAAGAGAACGGGAATCCTCACGAGAAGCCTGCTACTCACAGGTCTCTCCAGAATaGATGGACTCTAAAGATGAT +
Preference number: 4 (lower is better)
Translates to: QGHAPRRERESSREACYSQVSPE*MDSKDD
Trigger: ATCATCTTTAGAGTCCATCCATTCTGGAGAGACCTG...TGAGTAGCAGGCTTCTCGTGAGGATTCCCGTTCTCTTCTGGGAGCATGGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp CTCATGAACTCCTTAAACCTCCCATTTGGCAAGTATCCCACCACAGTTGTGCCCGGTGGTTCTTCTCCTTaGCTCCTCGCTCCATTCTCA +
Preference number: 4 (lower is better)
Translates to: LMNSLNLPFGKYPTTVVPGGSSP*LLAPFS
Trigger: TGAGAATGGAGCGAGGAGCCAAGGAGAAGAACCACC...GGGCACAACTGTGGTGGGATACTTGCCAAATGGGAGGTTTAAGGAGTTCATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521806.5
CDS-3UTR CCA 90 bp CAGGGCCATGCTCCCAGAAGAGAACGGGAATCCTCACGAGAAGCCTGCTACTCAGACTCATATTACAGATaGGGAAACCGAGACACACAT +
Preference number: 4 (lower is better)
Translates to: QGHAPRRERESSREACYSDSYYR*GNRDTH
Trigger: ATGTGTGTCTCGGTTTCCCCATCTGTAATATGAGTC...TGAGTAGCAGGCTTCTCGTGAGGATTCCCGTTCTCTTCTGGGAGCATGGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp ACACGGGCTTGCATAACAGACTCTTGTACCGCCATCTCTAGCACAAGACCATGGCACTCATTACACCACTaGGTGTCATTCCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: TRACITDSCTAISSTRPWHSLHH*VSFPAQ
Trigger: CTGAGCTGGGAATGACACCCAGTGGTGTAATGAGTG...CCATGGTCTTGTGCTAGAGATGGCGGTACAAGAGTCTGTTATGCAAGCCCGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp GGAAACCGAGACACACATTCAACAAAGCGCGCATCACATGGGGAGTTCAGGGTTCAGAGAATTCAGAGGTaGACGAGGTCTCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: GNRDTHSTKRASHGEFRVQRIQR*TRSLRS
Trigger: TGACCTCAGAGACCTCGTCCACCTCTGAATTCTCTG...AACCCTGAACTCCCCATGTGATGCGCGCTTTGTTGAATGTGTGTCTCGGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp ACACGGGCTTGCATAACAGACTCTTGTACCGCCATCTCTAGCACAAGACCATGGGGAAATCAATGCAGCTaGCCGGCCAGAATGCATATG +
Preference number: 4 (lower is better)
Translates to: TRACITDSCTAISSTRPWGNQCS*PARMHM
Trigger: CATATGCATTCTGGCCGGCCAGCTGCATTGATTTCC...CCATGGTCTTGTGCTAGAGATGGCGGTACAAGAGTCTGTTATGCAAGCCCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp ACTCATGAACTCCTTAAACCTCCCATTTGGCAAGTATCCCACCACAGTTGTGCCTGCTATCCTGGGACCTaGACCAGAGTTCACCTGAGC +
Preference number: 4 (lower is better)
Translates to: THELLKPPIWQVSHHSCACYPGT*TRVHLS
Trigger: GCTCAGGTGAACTCTGGTCCAGGTCCCAGGATAGCA...GGCACAACTGTGGTGGGATACTTGCCAAATGGGAGGTTTAAGGAGTTCATGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521806.5
CDS-3UTR CCA 90 bp CTCATGAACTCCTTAAACCTCCCATTTGGCAAGTATCCCACCACAGTTGTGCCCAAGCCAGTGCTATCCTaGGACCTGGACCAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: LMNSLNLPFGKYPTTVVPKPVLS*DLDQSS
Trigger: TGAACTCTGGTCCAGGTCCCAGGATAGCACTGGCTT...GGGCACAACTGTGGTGGGATACTTGCCAAATGGGAGGTTTAAGGAGTTCATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521806.5
CDS-3UTR TCA 90 bp CTCATGAACTCCTTAAACCTCCCATTTGGCAAGTATCCCACCACAGTTGTGCCCTGGGATCCTTTGCAATaGTTCCGTTGGTGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: LMNSLNLPFGKYPTTVVPWDPLQ*FRWCRA
Trigger: AGCCCTACACCAACGGAATCATTGCAAAGGATCCCA...GGGCACAACTGTGGTGGGATACTTGCCAAATGGGAGGTTTAAGGAGTTCATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521806.5
CDS-3UTR TCA 90 bp ACTCATGAACTCCTTAAACCTCCCATTTGGCAAGTATCCCACCACAGTTGTGCCTCGATCGGTGAGGTATaGTTGGCCACACAGATGCCA +
Preference number: 4 (lower is better)
Translates to: THELLKPPIWQVSHHSCASIGEV*LATQMP
Trigger: TGGCATCTGTGTGGCCAATCATACCTCACCGATCGA...GGCACAACTGTGGTGGGATACTTGCCAAATGGGAGGTTTAAGGAGTTCATGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521806.5
CDS-3UTR GCA 90 bp GAAGCATCAAGTCCCAAGGCTGGTTCTGCTGTCAAGGGAATCCCACTAGCTTTATTAGTGCCCACTGTTTaGTGTGCCGTGAAGGTCACA +
Preference number: 4 (lower is better)
Translates to: EASSPKAGSAVKGIPLALLVPTV*CAVKVT
Trigger: TGTGACCTTCACGGCACAGCAAACAGTGGGCACTAA...TAAAGCTAGTGGGATTCCCTTGACAGCAGAACCAGCCTTGGGACTTGATGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp CTCATGAACTCCTTAAACCTCCCATTTGGCAAGTATCCCACCACAGTTGTGCCCATTGCAGCCTTCAGATaGTCCTTCCTGACAGCACCA +
Preference number: 4 (lower is better)
Translates to: LMNSLNLPFGKYPTTVVPIAAFR*SFLTAP
Trigger: TGGTGCTGTCAGGAAGGACCATCTGAAGGCTGCAAT...GGGCACAACTGTGGTGGGATACTTGCCAAATGGGAGGTTTAAGGAGTTCATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521806.5
CDS-3UTR CCA 90 bp ATTTCTTGGTCTGTTTTCCCTGTCATGGTAGGTGATGATGGCTGTCAGCGCTCGTCGGTGAGGTATGATTaGCCACACAGATGCCACCAT +
Preference number: 4 (lower is better)
Translates to: ISWSVFPVMVGDDGCQRSSVRYD*PHRCHH
Trigger: ATGGTGGCATCTGTGTGGCCAATCATACCTCACCGA...CGAGCGCTGACAGCCATCATCACCTACCATGACAGGGAAAACAGACCAAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521806.5
CDS-3UTR CCA 90 bp ACACGGGCTTGCATAACAGACTCTTGTACCGCCATCTCTAGCACAAGACCATGGATCAAGTCCCAAGGCTaGTTCTGCTGTCAAGGGAAT +
Preference number: 4 (lower is better)
Translates to: TRACITDSCTAISSTRPWIKSQG*FCCQGN
Trigger: ATTCCCTTGACAGCAGAACCAGCCTTGGGACTTGAT...CCATGGTCTTGTGCTAGAGATGGCGGTACAAGAGTCTGTTATGCAAGCCCGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp CAGGGCCATGCTCCCAGAAGAGAACGGGAATCCTCACGAGAAGCCTGCTACTCAAGAAAATCAAGTTCCTaGCCAATTCCAGGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: QGHAPRRERESSREACYSRKSSS*PIPGRK
Trigger: TTTCCTTCCTGGAATTGGCCAGGAACTTGATTTTCT...TGAGTAGCAGGCTTCTCGTGAGGATTCCCGTTCTCTTCTGGGAGCATGGCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR TCA 90 bp GGAAACCGAGACACACATTCAACAAAGCGCGCATCACATGGGGAGTTCAGGGTTAGATGCCCAGAAGGTTaGCAATCAGGCTATCAAAAG +
Preference number: 4 (lower is better)
Translates to: GNRDTHSTKRASHGEFRVRCPEG*QSGYQK
Trigger: CTTTTGATAGCCTGATTGTCAACCTTCTGGGCATCT...AACCCTGAACTCCCCATGTGATGCGCGCTTTGTTGAATGTGTGTCTCGGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp CTCATGAACTCCTTAAACCTCCCATTTGGCAAGTATCCCACCACAGTTGTGCCCGATTGGCCACACAGATaGCACCATTTCTTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: LMNSLNLPFGKYPTTVVPDWPHR*HHFLVC
Trigger: ACAGACCAAGAAATGGTGGCATCTGTGTGGCCAATC...GGGCACAACTGTGGTGGGATACTTGCCAAATGGGAGGTTTAAGGAGTTCATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521806.5
CDS-3UTR GCA 90 bp ACACGGGCTTGCATAACAGACTCTTGTACCGCCATCTCTAGCACAAGACCATGGTGTGTTACTGGGTGGTaGTGGGAGACTAATAGGAAA +
Preference number: 4 (lower is better)
Translates to: TRACITDSCTAISSTRPWCVTGW*WETNRK
Trigger: TTTCCTATTAGTCTCCCAGCACCACCCAGTAACACA...CCATGGTCTTGTGCTAGAGATGGCGGTACAAGAGTCTGTTATGCAAGCCCGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp CAGGGCCATGCTCCCAGAAGAGAACGGGAATCCTCACGAGAAGCCTGCTACTCATCTCTCCAGAATGGATaGACTCTAAAGATGATTGAA +
Preference number: 4 (lower is better)
Translates to: QGHAPRRERESSREACYSSLQNG*TLKMIE
Trigger: TTCAATCATCTTTAGAGTCCATCCATTCTGGAGAGA...TGAGTAGCAGGCTTCTCGTGAGGATTCCCGTTCTCTTCTGGGAGCATGGCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp ACACGGGCTTGCATAACAGACTCTTGTACCGCCATCTCTAGCACAAGACCATGGCAGATAAATCTGTCCTaGAGATCTGTCACTACCAGA +
Preference number: 4 (lower is better)
Translates to: TRACITDSCTAISSTRPWQINLS*RSVTTR
Trigger: TCTGGTAGTGACAGATCTGCAGGACAGATTTATCTG...CCATGGTCTTGTGCTAGAGATGGCGGTACAAGAGTCTGTTATGCAAGCCCGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp ACACGGGCTTGCATAACAGACTCTTGTACCGCCATCTCTAGCACAAGACCATGGTCCCTAAGAACAAATTaGAGCCTTCAGATGGTCCTT +
Preference number: 4 (lower is better)
Translates to: TRACITDSCTAISSTRPWSLRTN*SLQMVL
Trigger: AAGGACCATCTGAAGGCTGCAATTTGTTCTTAGGGA...CCATGGTCTTGTGCTAGAGATGGCGGTACAAGAGTCTGTTATGCAAGCCCGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp GGAAACCGAGACACACATTCAACAAAGCGCGCATCACATGGGGAGTTCAGGGTTAAGTTCCCTAACTGGTaGGTGGAAAGTCTCATGTTT +
Preference number: 4 (lower is better)
Translates to: GNRDTHSTKRASHGEFRVKFPNW*VESLMF
Trigger: AAACATGAGACTTTCCACCCACCAGTTAGGGAACTT...AACCCTGAACTCCCCATGTGATGCGCGCTTTGTTGAATGTGTGTCTCGGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp GAAGCATCAAGTCCCAAGGCTGGTTCTGCTGTCAAGGGAATCCCACTAGCTTTAGTTACTGGGTGGTGCTaGGAGACTAATAGGAAATCA +
Preference number: 4 (lower is better)
Translates to: EASSPKAGSAVKGIPLALVTGWC*ETNRKS
Trigger: TGATTTCCTATTAGTCTCCCAGCACCACCCAGTAAC...TAAAGCTAGTGGGATTCCCTTGACAGCAGAACCAGCCTTGGGACTTGATGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR GCA 90 bp GGAAACCGAGACACACATTCAACAAAGCGCGCATCACATGGGGAGTTCAGGGTTTTTTCATGTAGAGTTTaGGGATACCAAAGGAGACTC +
Preference number: 4 (lower is better)
Translates to: GNRDTHSTKRASHGEFRVFSCRV*GYQRRL
Trigger: GAGTCTCCTTTGGTATCCGCAAACTCTACATGAAAA...AACCCTGAACTCCCCATGTGATGCGCGCTTTGTTGAATGTGTGTCTCGGTTTCC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CCA 90 bp ACTCATGAACTCCTTAAACCTCCCATTTGGCAAGTATCCCACCACAGTTGTGCCCTTAAACCTCCCATTTaGCAAGTATCCCACCACAGT +
Preference number: 4 (lower is better)
Translates to: THELLKPPIWQVSHHSCALKPPI*QVSHHS
Trigger: ACTGTGGTGGGATACTTGCCAAATGGGAGGTTTAAG...GGCACAACTGTGGTGGGATACTTGCCAAATGGGAGGTTTAAGGAGTTCATGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521806.5
CDS-3UTR GCA 90 bp CTCATGAACTCCTTAAACCTCCCATTTGGCAAGTATCCCACCACAGTTGTGCCCTTTTCATGTAGAGTTTaGGGATACCAAAGGAGACTC +
Preference number: 4 (lower is better)
Translates to: LMNSLNLPFGKYPTTVVPFSCRV*GYQRRL
Trigger: GAGTCTCCTTTGGTATCCGCAAACTCTACATGAAAA...GGGCACAACTGTGGTGGGATACTTGCCAAATGGGAGGTTTAAGGAGTTCATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521806.5
CDS-3UTR CCA 90 bp ACACGGGCTTGCATAACAGACTCTTGTACCGCCATCTCTAGCACAAGACCATGGATGATTGAAGCTAGATaGGTCTTCAGTAAAAGCATC +
Preference number: 4 (lower is better)
Translates to: TRACITDSCTAISSTRPWMIEAR*VFSKSI
Trigger: GATGCTTTTACTGAAGACCCATCTAGCTTCAATCAT...CCATGGTCTTGTGCTAGAGATGGCGGTACAAGAGTCTGTTATGCAAGCCCGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CAA 90 bp TTGCTTCCCCTAGGCCTCACATCAGCGACCCGCACACACCCCGTCTCTGGAGAACCAGCTCTGAGCCCGTaGGCACCCCGCACGGTGGCC +
Preference number: 5 (lower is better)
Translates to: LLPLGLTSATRTHPVSGEPALSP*APRTVA
Trigger: GGCCACCGTGCGGGGTGCCAACGGGCTCAGAGCTGG...TTCTCCAGAGACGGGGTGTGTGCGGGTCGCTGATGTGAGGCCTAGGGGAAGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CAA 90 bp CAGGGCCATGCTCCCAGAAGAGAACGGGAATCCTCACGAGAAGCCTGCTACTCAAGGCTGGGGGCGATGTaGAGGCCGAAGCCAGCCACA +
Preference number: 5 (lower is better)
Translates to: QGHAPRRERESSREACYSRLGAM*RPKPAT
Trigger: TGTGGCTGGCTTCGGCCTCAACATCGCCCCCAGCCT...TGAGTAGCAGGCTTCTCGTGAGGATTCCCGTTCTCTTCTGGGAGCATGGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CAA 90 bp CAGGGCCATGCTCCCAGAAGAGAACGGGAATCCTCACGAGAAGCCTGCTACTCACGCTCCAGCAGTCAGTaGGCTTCTCCGCAGCCCCAG +
Preference number: 5 (lower is better)
Translates to: QGHAPRRERESSREACYSRSSSQ*ASPQPQ
Trigger: CTGGGGCTGCGGAGAAGCCAACTGACTGCTGGAGCG...TGAGTAGCAGGCTTCTCGTGAGGATTCCCGTTCTCTTCTGGGAGCATGGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CAA 90 bp TTGCTTCCCCTAGGCCTCACATCAGCGACCCGCACACACCCCGTCTCTGGAGAACTGACTATGGGTCACTaGGGGCTTGCAGGACCCCTA +
Preference number: 5 (lower is better)
Translates to: LLPLGLTSATRTHPVSGELTMGH*GLAGPL
Trigger: TAGGGGTCCTGCAAGCCCCAAGTGACCCATAGTCAG...TTCTCCAGAGACGGGGTGTGTGCGGGTCGCTGATGTGAGGCCTAGGGGAAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CAA 90 bp TCAGGGTTAGCCTGGAGTACGAACACACGTTCTCCCCATGGCCCAGTCAGCGGCGAGTCCCCCGTGCACTaGACCCACCATGGCATAATA +
Preference number: 5 (lower is better)
Translates to: SGLAWSTNTRSPHGPVSGESPVH*THHGII
Trigger: TATTATGCCATGGTGGGTCAAGTGCACGGGGGACTC...GCCGCTGACTGGGCCATGGGGAGAACGTGTGTTCGTACTCCAGGCTAACCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CAA 90 bp TCTGAGAACCACAATGAAGATACTGCCCAGCCTGAGAGCAGTATGGCCCCAGCCGAGCGGCTCCTGTCCTaGTGGTTCCCCACGATCATC +
Preference number: 5 (lower is better)
Translates to: SENHNEDTAQPESSMAPAERLLS*WFPTII
Trigger: GATGATCGTGGGGAACCACAAGGACAGGAGCCGCTC...GGCTGGGGCCATACTGCTCTCAGGCTGGGCAGTATCTTCATTGTGGTTCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS GCA 90 bp TGGAAGATCCAGGCCAGGCCAGCACCTGCCTCCCTAAGAACAAATTaGAGCCTTCAGATGGTCCTTCCTGACAGCACCAGCCAGGGAAAG +
Preference number: 5 (lower is better)
Translates to: WKIQARPAPASLRTN*SLQMVLPDSTSQGK
Trigger: CTTTCCCTGGCTGGTGCTGTCAGGAAGGACCATCTGAAGGCTGCAATTTGTTCTTAGGGAGGCAGGTGCTGGCCTGGCCTGGATCTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396987.7
ENST00000520223.1
ENST00000521806.5
CDS-3UTR CAA 90 bp CAGGGCCATGCTCCCAGAAGAGAACGGGAATCCTCACGAGAAGCCTGCTACTCATGGTGGTTCTTCTCCTaGGCTCCTCGCTCCATTCTC +
Preference number: 5 (lower is better)
Translates to: QGHAPRRERESSREACYSWWFFS*APRSIL
Trigger: GAGAATGGAGCGAGGAGCCAAGGAGAAGAACCACCA...TGAGTAGCAGGCTTCTCGTGAGGATTCCCGTTCTCTTCTGGGAGCATGGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CAA 90 bp TCTGAGAACCACAATGAAGATACTGCCCAGCCTGAGAGCAGTATGGCCCCAGCCGCAGAGAAAAGGAGATaGCAGGGCCAACCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: SENHNEDTAQPESSMAPAAEKRR*QGQPSR
Trigger: CCTGCTGGGTTGGCCCTGCAATCTCCTTTTCTCTGC...GGCTGGGGCCATACTGCTCTCAGGCTGGGCAGTATCTTCATTGTGGTTCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CAA 90 bp CTGGGGGAGAGAGTGGGGTGTGCGTGCTGTAGAAGATGGATGGCTGCGTGGCCATGTAATCTCAGCTACTaGGAGGCTGAGGCAGAAGAA +
Preference number: 5 (lower is better)
Translates to: LGERVGCACCRRWMAAWPCNLSY*EAEAEE
Trigger: TTCTTCTGCCTCAGCCTCCAAGTAGCTGAGATTACA...TGGCCACGCAGCCATCCATCTTCTACAGCACGCACACCCCACTCTCTCCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CAA 90 bp CAGGGCCATGCTCCCAGAAGAGAACGGGAATCCTCACGAGAAGCCTGCTACTCATCGGAGAGAGACATATaGACTGGGGGAGAGAGTGGG +
Preference number: 5 (lower is better)
Translates to: QGHAPRRERESSREACYSSERDI*TGGESG
Trigger: CCCACTCTCTCCCCCAGTCAATATGTCTCTCTCCGA...TGAGTAGCAGGCTTCTCGTGAGGATTCCCGTTCTCTTCTGGGAGCATGGCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CAA 90 bp CAGGGCCATGCTCCCAGAAGAGAACGGGAATCCTCACGAGAAGCCTGCTACTCACCTGGAGTTTACTCATaGCTTCCCCTAGGCCTCACA +
Preference number: 5 (lower is better)
Translates to: QGHAPRRERESSREACYSPGVYS*LPLGLT
Trigger: TGTGAGGCCTAGGGGAAGCAATGAGTAAACTCCAGG...TGAGTAGCAGGCTTCTCGTGAGGATTCCCGTTCTCTTCTGGGAGCATGGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS TCA 90 bp GTCTTCAGTAAAAGCATCCGAGTCCAGATGGAGTTTCTGTGCAAGTaGGCAGTGAGGACGGGGGCTCTGCTCTGCTGTCCTGATGCTGCT +
Preference number: 5 (lower is better)
Translates to: VFSKSIRVQMEFLCK*AVRTGALLCCPDAA
Trigger: AGCAGCATCAGGACAGCAGAGCAGAGCCCCCGTCCTCACTGCTCACTTGCACAGAAACTCCATCTGGACTCGGATGCTTTTACTGAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396987.7
ENST00000520223.1
ENST00000520258.1
CDS TCA 90 bp GCATCTGGCAAGGCACACTCAGAGCAGCACATGGTGCAGAGAAGCTaGAAGATCAATACTGCCCCTGTACCTGAGAGGCAAGCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: ASGKAHSEQHMVQRS*KINTAPVPERQASG
Trigger: TCCTGAAGCTTGCCTCTCAGGTACAGGGGCAGTATTGATCTTTCAGCTTCTCTGCACCATGTGCTGCTCTGAGTGTGCCTTGCCAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519921.5
CDS GCA 90 bp TCCTGGAAGACTGGTTCAAACCCCAGAAAGGTACACAGAATCAACTaGCTCAGTCCAGGCATCCCTGATCCAGGTTCCCCAAGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: SWKTGSNPRKVHRIN*LSPGIPDPGSPRSR
Trigger: CCTTGACCTTGGGGAACCTGGATCAGGGATGCCTGGACTGAGGCAGTTGATTCTGTGTACCTTTCTGGGGTTTGAACCAGTCTTCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518628.1
CDS CCA 90 bp CGAGTGCTGAGTGTAACTCCAGATGCATCTGGCATTGGTATCCTCTaGACACTCTTCTCCCGAAGGCACCCTTTCTTAGCAGTGACCTGG +
Preference number: 5 (lower is better)
Translates to: RVLSVTPDASGIGIL*TLFSRRHPFLAVTW
Trigger: CCAGGTCACTGCTAAGAAAGGGTGCCTTCGGGAGAAGAGTGTCCAGAGGATACCAATGCCAGATGCATCTGGAGTTACACTCAGCACTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396987.7
ENST00000519853.5
ENST00000520223.1
ENST00000520258.1
ENST00000521121.1
ENST00000521184.1
CDS CCA 90 bp GATCCAGGTTCCCCAAGGTCAAGGAAGCACAGGGCACTTCTGGGTTaGAATTCGGGGAGAGTCAAACTGCTCTCTCTAGAGCTGACAAGT +
Preference number: 5 (lower is better)
Translates to: DPGSPRSRKHRALLG*NSGRVKLLSLELTS
Trigger: ACTTGTCAGCTCTAGAGAGAGCAGTTTGACTCTCCCCGAATTCCAACCCAGAAGTGCCCTGTGCTTCCTTGACCTTGGGGAACCTGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518628.1
CDS-3UTR CAA 90 bp TCTGAGAACCACAATGAAGATACTGCCCAGCCTGAGAGCAGTATGGCCCCAGCCCAGATGCATCTGGCATaGGTATCCTCTGGACACTCT +
Preference number: 5 (lower is better)
Translates to: SENHNEDTAQPESSMAPAQMHLA*VSSGHS
Trigger: AGAGTGTCCAGAGGATACCAATGCCAGATGCATCTG...GGCTGGGGCCATACTGCTCTCAGGCTGGGCAGTATCTTCATTGTGGTTCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CAA 90 bp CCTGTCATGGTAGGTGATGATGGCTGTCAGCGCTCGCACGCAGATCCGGTAACACTCCCTAAGAACAAATaGCAGCCTTCAGATGGTCCT +
Preference number: 5 (lower is better)
Translates to: PVMVGDDGCQRSHADPVTLPKNK*QPSDGP
Trigger: AGGACCATCTGAAGGCTGCAATTTGTTCTTAGGGAG...TGTTACCGGATCTGCGTGCGAGCGCTGACAGCCATCATCACCTACCATGACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521806.5
CDS-3UTR CAA 90 bp TGCCTCCACTGTGACTGTACAGCAGGCACCAGTGGCCGACTCTTTTCCTGTGGTGAGATGCCCAGAAGGTaGACAATCAGGCTATCAAAA +
Preference number: 5 (lower is better)
Translates to: CLHCDCTAGTSGRLFSCGEMPRR*TIRLSK
Trigger: TTTTGATAGCCTGATTGTCAACCTTCTGGGCATCTC...ACCACAGGAAAAGAGTCGGCCACTGGTGCCTGCTGTACAGTCACAGTGGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CAA 90 bp CCTGTCATGGTAGGTGATGATGGCTGTCAGCGCTCGCACGCAGATCCGGTAACAGAGATGCCCAGAAGGTaGACAATCAGGCTATCAAAA +
Preference number: 5 (lower is better)
Translates to: PVMVGDDGCQRSHADPVTEMPRR*TIRLSK
Trigger: TTTTGATAGCCTGATTGTCAACCTTCTGGGCATCTC...TGTTACCGGATCTGCGTGCGAGCGCTGACAGCCATCATCACCTACCATGACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521806.5
CDS-3UTR CAA 90 bp ATTTCTTGGTCTGTTTTCCCTGTCATGGTAGGTGATGATGGCTGTCAGCGCTCGTGGTGGTTCTTCTCCTaGGCTCCTCGCTCCATTCTC +
Preference number: 5 (lower is better)
Translates to: ISWSVFPVMVGDDGCQRSWWFFS*APRSIL
Trigger: GAGAATGGAGCGAGGAGCCAAGGAGAAGAACCACCA...CGAGCGCTGACAGCCATCATCACCTACCATGACAGGGAAAACAGACCAAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521806.5
CDS-3UTR CAA 90 bp TGCCTCCACTGTGACTGTACAGCAGGCACCAGTGGCCGACTCTTTTCCTGTGGTAAGTGTCTTGAGTTTTaGCCCCATAAGACCAACTCG +
Preference number: 5 (lower is better)
Translates to: CLHCDCTAGTSGRLFSCGKCLEF*PHKTNS
Trigger: CGAGTTGGTCTTATGGGGCAAAAACTCAAGACACTT...ACCACAGGAAAAGAGTCGGCCACTGGTGCCTGCTGTACAGTCACAGTGGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CAA 90 bp CTGGGGGAGAGAGTGGGGTGTGCGTGCTGTAGAAGATGGATGGCTGCGTGGCCAGATCAAAGCCAAAGTTaGAACTATGGGCTTAAAAAC +
Preference number: 5 (lower is better)
Translates to: LGERVGCACCRRWMAAWPDQSQS*NYGLKN
Trigger: GTTTTTAAGCCCATAGTTCAAACTTTGGCTTTGATC...TGGCCACGCAGCCATCCATCTTCTACAGCACGCACACCCCACTCTCTCCCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CAA 90 bp GGAAACCGAGACACACATTCAACAAAGCGCGCATCACATGGGGAGTTCAGGGTTTTAAAAAGTTCCCTCTaGGCTGGGCGCAGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: GNRDTHSTKRASHGEFRVLKSSL*AGRSGS
Trigger: TGAGCCACTGCGCCCAGCCAAGAGGGAACTTTTTAA...AACCCTGAACTCCCCATGTGATGCGCGCTTTGTTGAATGTGTGTCTCGGTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CAA 90 bp GAAGCATCAAGTCCCAAGGCTGGTTCTGCTGTCAAGGGAATCCCACTAGCTTTAGTTAGTGCCCACTGTTaGCTGTGCCGTGAAGGTCAC +
Preference number: 5 (lower is better)
Translates to: EASSPKAGSAVKGIPLALVSAHC*LCREGH
Trigger: GTGACCTTCACGGCACAGCAAACAGTGGGCACTAAC...TAAAGCTAGTGGGATTCCCTTGACAGCAGAACCAGCCTTGGGACTTGATGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS GCA 90 bp TGGCACACAATGTCTCATACTGCGAGTGCTGAGTGTAACTCCAGATaGATCTGGCATTGGTATCCTCTGGACACTCTTCTCCCGAAGGCA +
Preference number: 5 (lower is better)
Translates to: WHTMSHTASAECNSR*IWHWYPLDTLLPKA
Trigger: TGCCTTCGGGAGAAGAGTGTCCAGAGGATACCAATGCCAGATGCATCTGGAGTTACACTCAGCACTCGCAGTATGAGACATTGTGTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396987.7
ENST00000519853.5
ENST00000520223.1
ENST00000520258.1
ENST00000521121.1
ENST00000521184.1
CDS GCA 90 bp ATGGCTGGCACTGGAGAGCTACAGTCTTTGCCAGAAGGAAAGAGATaGTGGCACACAATGTCTCATACTGCGAGTGCTGAGTGTAACTCC +
Preference number: 5 (lower is better)
Translates to: MAGTGELQSLPEGKR*WHTMSHTASAECNS
Trigger: GGAGTTACACTCAGCACTCGCAGTATGAGACATTGTGTGCCAGCATCTCTTTCCTTCTGGCAAAGACTGTAGCTCTCCAGTGCCAGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519853.5
CDS CCA 90 bp TCTCATACTGCGAGTGCTGAGTGTAACTCCAGATGCATCTGGCATTaGTATCCTCTGGACACTCTTCTCCCGAAGGCACCCTTTCTTAGC +
Preference number: 5 (lower is better)
Translates to: SHTASAECNSRCIWH*YPLDTLLPKAPFLS
Trigger: GCTAAGAAAGGGTGCCTTCGGGAGAAGAGTGTCCAGAGGATACCAATGCCAGATGCATCTGGAGTTACACTCAGCACTCGCAGTATGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396987.7
ENST00000519853.5
ENST00000520223.1
ENST00000520258.1
ENST00000521121.1
ENST00000521184.1
CDS CCA 90 bp GCTGGCACTGGAGAGCTACAGTCTTTGCCAGAAGGAAAGAGATGCTaGCACACAATGTCTCATACTGCGAGTGCTGAGTGTAACTCCAGA +
Preference number: 5 (lower is better)
Translates to: AGTGELQSLPEGKRC*HTMSHTASAECNSR
Trigger: TCTGGAGTTACACTCAGCACTCGCAGTATGAGACATTGTGTGCCAGCATCTCTTTCCTTCTGGCAAAGACTGTAGCTCTCCAGTGCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519853.5
CDS GCA 90 bp ATCCTCCTACCTGGAGAGCTACAGTCTTTGCCAGAAGGAAAGAGATaGTGGCACACAATGTCTCATACTGCGAGTGCTGAGTGTAACTCC +
Preference number: 5 (lower is better)
Translates to: ILLPGELQSLPEGKR*WHTMSHTASAECNS
Trigger: GGAGTTACACTCAGCACTCGCAGTATGAGACATTGTGTGCCAGCATCTCTTTCCTTCTGGCAAAGACTGTAGCTCTCCAGGTAGGAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396987.7
ENST00000520223.1
ENST00000520258.1
ENST00000521121.1
ENST00000521184.1
CDS CCA 90 bp ACAATGTCTCATACTGCGAGTGCTGAGTGTAACTCCAGATGCATCTaGCATTGGTATCCTCTGGACACTCTTCTCCCGAAGGCACCCTTT +
Preference number: 5 (lower is better)
Translates to: TMSHTASAECNSRCI*HWYPLDTLLPKAPF
Trigger: AAAGGGTGCCTTCGGGAGAAGAGTGTCCAGAGGATACCAATGCCAGATGCATCTGGAGTTACACTCAGCACTCGCAGTATGAGACATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396987.7
ENST00000519853.5
ENST00000520223.1
ENST00000520258.1
ENST00000521121.1
ENST00000521184.1
CDS CCA 90 bp CTCCTACCTGGAGAGCTACAGTCTTTGCCAGAAGGAAAGAGATGCTaGCACACAATGTCTCATACTGCGAGTGCTGAGTGTAACTCCAGA +
Preference number: 5 (lower is better)
Translates to: LLPGELQSLPEGKRC*HTMSHTASAECNSR
Trigger: TCTGGAGTTACACTCAGCACTCGCAGTATGAGACATTGTGTGCCAGCATCTCTTTCCTTCTGGCAAAGACTGTAGCTCTCCAGGTAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396987.7
ENST00000520223.1
ENST00000520258.1
ENST00000521121.1
ENST00000521184.1
CDS GCA 90 bp TCTCCCTCTTCAGGCCCCCATCCCTTTCTAAGAATGGTTCAATTTTaGCAGATACACTGGGACCTGGGAAAGTCCTCCTTCCTTCTTGAA +
Preference number: 5 (lower is better)
Translates to: SPSSGPHPFLRMVQF*QIHWDLGKSSFLLE
Trigger: TTCAAGAAGGAAGGAGGACTTTCCCAGGTCCCAGTGTATCTGGCAAAATTGAACCATTCTTAGAAAGGGATGGGGGCCTGAAGAGGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518628.1
CDS-3UTR CAA 90 bp GAAGCATCAAGTCCCAAGGCTGGTTCTGCTGTCAAGGGAATCCCACTAGCTTTACTCCCTAAGAACAAATaGCAGCCTTCAGATGGTCCT +
Preference number: 5 (lower is better)
Translates to: EASSPKAGSAVKGIPLALLPKNK*QPSDGP
Trigger: AGGACCATCTGAAGGCTGCAATTTGTTCTTAGGGAG...TAAAGCTAGTGGGATTCCCTTGACAGCAGAACCAGCCTTGGGACTTGATGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS-3UTR CAA 90 bp CAGGGCCATGCTCCCAGAAGAGAACGGGAATCCTCACGAGAAGCCTGCTACTCAATGTTTCTAAGTGTCTaGAGTTTTTGCCCCATAAGA +
Preference number: 5 (lower is better)
Translates to: QGHAPRRERESSREACYSMFLSV*SFCPIR
Trigger: TCTTATGGGGCAAAAACTCAAGACACTTAGAAACAT...TGAGTAGCAGGCTTCTCGTGAGGATTCCCGTTCTCTTCTGGGAGCATGGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396987.7
CDS TCA 90 bp GCTCTCTCTAGAGCTGACAAGTTTAATTCTCCACACCACGGGGAATaGCATGTAAGTGAAGTCAATGACACAGCATCTGCTGCAGAAACT +
Preference number: 5 (lower is better)
Translates to: ALSRADKFNSPHHGE*HVSEVNDTASAAET
Trigger: AGTTTCTGCAGCAGATGCTGTGTCATTGACTTCACTTACATGTCATTCCCCGTGGTGTGGAGAATTAAACTTGTCAGCTCTAGAGAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518628.1
CDS CCA 90 bp AGGTCTCTCCAGAATGGATGGACTCTAAAGATGATTGAAGCTAGATaGGTCTTCAGTAAAAGCATCCGAGTCCAGATGGAGTTTCTGTGC +
Preference number: 5 (lower is better)
Translates to: RSLQNGWTLKMIEAR*VFSKSIRVQMEFLC
Trigger: GCACAGAAACTCCATCTGGACTCGGATGCTTTTACTGAAGACCCATCTAGCTTCAATCATCTTTAGAGTCCATCCATTCTGGAGAGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396987.7
ENST00000520223.1
ENST00000520258.1
CDS CCA 90 bp TTTCATGTAGAGTTTGCGGATACCAAAGGAGACTCCAAAAATGGCTaGCACTATGATGAAAACGAGAAGGAGGGTGAAGAGGACAGTCAG +
Preference number: 5 (lower is better)
Translates to: FHVEFADTKGDSKNG*HYDENEKEGEEDSQ
Trigger: CTGACTGTCCTCTTCACCCTCCTTCTCGTTTTCATCATAGTGCCAGCCATTTTTGGAGTCTCCTTTGGTATCCGCAAACTCTACATGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396987.7
ENST00000521806.5
CDS CCA 72 bp TGCTGCCCTCCCCTTCCCTTTGGCTGGAAACCCCGGTaGAAGCACAGCTTCCCTCTGAAGCAACAGGAGGTG +
Preference number: 6 (lower is better)
Translates to: CCPPLPFGWKPR*KHSFPLKQQEV
Trigger: CACCTCCTGTTGCTTCAGAGGGAAGCTGTGCTTCCACCGGGGTTTCCAGCCAAAGGGAAGGGGAGGGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519921.5
CDS CAA 72 bp GCCAGCTGGAGGCAGGCTCAGGAGCGGCTCCTGTCCTaGTGGTTCCCCACGATCATCTTGCTGTACAGCTTC +
Preference number: 6 (lower is better)
Translates to: ASWRQAQERLLS*WFPTIILLYSF
Trigger: GAAGCTGTACAGCAAGATGATCGTGGGGAACCACAAGGACAGGAGCCGCTCCTGAGCCTGCCTCCAGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396987.7
ENST00000518628.1
ENST00000521349.1
CDS TCA 72 bp TCACAACGTTTGCGAGTCCACAGTGACTGCTGTGAGTaGCTCCACTGGGCCGTGCTGGTACTGGGGTGCTGC +
Preference number: 6 (lower is better)
Translates to: SQRLRVHSDCCE*LHWAVLVLGCC
Trigger: GCAGCACCCCAGTACCAGCACGGCCCAGTGGAGTCACTCACAGCAGTCACTGTGGACTCGCAAACGTTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521349.1
CDS CCA 72 bp AGCTGGAGGCAGGCTCAGGAGCGGCTCCTGTCCTTGTaGTTCCCCACGATCATCTTGCTGTACAGCTTCTGC +
Preference number: 6 (lower is better)
Translates to: SWRQAQERLLSL*FPTIILLYSFC
Trigger: GCAGAAGCTGTACAGCAAGATGATCGTGGGGAACCACAAGGACAGGAGCCGCTCCTGAGCCTGCCTCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396987.7
ENST00000518628.1
ENST00000521349.1
CDS GCA 72 bp CAGGCCAGGCCAGCACCTGCCTCCCTAAGAACAAATTaGAGCCTTCAGATGGTCCTTCCTGACAGCACCAGC +
Preference number: 6 (lower is better)
Translates to: QARPAPASLRTN*SLQMVLPDSTS
Trigger: GCTGGTGCTGTCAGGAAGGACCATCTGAAGGCTGCAATTTGTTCTTAGGGAGGCAGGTGCTGGCCTGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396987.7
ENST00000520223.1
ENST00000521806.5
CDS TCA 72 bp GGTACACAGAATCAACTGCCTCAGTCCAGGCATCCCTaGTCCAGGTTCCCCAAGGTCAAGGAAGCACAGGGC +
Preference number: 6 (lower is better)
Translates to: GTQNQLPQSRHP*SRFPKVKEAQG
Trigger: GCCCTGTGCTTCCTTGACCTTGGGGAACCTGGATCAGGGATGCCTGGACTGAGGCAGTTGATTCTGTGTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518628.1
CDS TCA 72 bp AAAAGCATCCGAGTCCAGATGGAGTTTCTGTGCAAGTaGGCAGTGAGGACGGGGGCTCTGCTCTGCTGTCCT +
Preference number: 6 (lower is better)
Translates to: KSIRVQMEFLCK*AVRTGALLCCP
Trigger: AGGACAGCAGAGCAGAGCCCCCGTCCTCACTGCTCACTTGCACAGAAACTCCATCTGGACTCGGATGCTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396987.7
ENST00000520223.1
ENST00000520258.1
CDS GCA 72 bp AGGAACATGGTGGAAGATCCAGGCCAGGCCAGCACCTaGCTCCCTAAGAACAAATTGCAGCCTTCAGATGGT +
Preference number: 6 (lower is better)
Translates to: RNMVEDPGQAST*LPKNKLQPSDG
Trigger: ACCATCTGAAGGCTGCAATTTGTTCTTAGGGAGGCAGGTGCTGGCCTGGCCTGGATCTTCCACCATGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396987.7
ENST00000520223.1
ENST00000521806.5
CDS GCA 72 bp ACTGGTTCAAACCCCAGAAAGGTACACAGAATCAACTaGCTCAGTCCAGGCATCCCTGATCCAGGTTCCCCA +
Preference number: 6 (lower is better)
Translates to: TGSNPRKVHRIN*LSPGIPDPGSP
Trigger: TGGGGAACCTGGATCAGGGATGCCTGGACTGAGGCAGTTGATTCTGTGTACCTTTCTGGGGTTTGAACCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518628.1
CDS CAA 90 bp GTGCTCACAGCTTCCAGGATCCTCCTACCTGGAGAGCTACAGTCTTaGCCAGAAGGAAAGAGATGCTGGCACACAATGTCTCATACTGCG +
Preference number: 6 (lower is better)
Translates to: VLTASRILLPGELQS*PEGKRCWHTMSHTA
Trigger: CGCAGTATGAGACATTGTGTGCCAGCATCTCTTTCCTTCTGGCAAAGACTGTAGCTCTCCAGGTAGGAGGATCCTGGAAGCTGTGAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396987.7
ENST00000520223.1
ENST00000520258.1
ENST00000521121.1
ENST00000521184.1
CDS GCA 72 bp CCTGGAGAGCTACAGTCTTTGCCAGAAGGAAAGAGATaGTGGCACACAATGTCTCATACTGCGAGTGCTGAG +
Preference number: 6 (lower is better)
Translates to: PGELQSLPEGKR*WHTMSHTASAE
Trigger: CTCAGCACTCGCAGTATGAGACATTGTGTGCCAGCATCTCTTTCCTTCTGGCAAAGACTGTAGCTCTCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396987.7
ENST00000520223.1
ENST00000520258.1
ENST00000521121.1
ENST00000521184.1
CDS CCA 72 bp CATACTGCGAGTGCTGAGTGTAACTCCAGATGCATCTaGCATTGGTATCCTCTGGACACTCTTCTCCCGAAG +
Preference number: 6 (lower is better)
Translates to: HTASAECNSRCI*HWYPLDTLLPK
Trigger: CTTCGGGAGAAGAGTGTCCAGAGGATACCAATGCCAGATGCATCTGGAGTTACACTCAGCACTCGCAGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396987.7
ENST00000519853.5
ENST00000520223.1
ENST00000520258.1
ENST00000521121.1
ENST00000521184.1
CDS GCA 72 bp TCAGGCCCCCATCCCTTTCTAAGAATGGTTCAATTTTaGCAGATACACTGGGACCTGGGAAAGTCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: SGPHPFLRMVQF*QIHWDLGKSSF
Trigger: GAAGGAGGACTTTCCCAGGTCCCAGTGTATCTGGCAAAATTGAACCATTCTTAGAAAGGGATGGGGGCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518628.1
CDS GCA 72 bp ACTGGAGAGCTACAGTCTTTGCCAGAAGGAAAGAGATaGTGGCACACAATGTCTCATACTGCGAGTGCTGAG +
Preference number: 6 (lower is better)
Translates to: TGELQSLPEGKR*WHTMSHTASAE
Trigger: CTCAGCACTCGCAGTATGAGACATTGTGTGCCAGCATCTCTTTCCTTCTGGCAAAGACTGTAGCTCTCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519853.5
CDS CCA 72 bp AGTGTAACTCCAGATGCATCTGGCATTGGTATCCTCTaGACACTCTTCTCCCGAAGGCACCCTTTCTTAGCA +
Preference number: 6 (lower is better)
Translates to: SVTPDASGIGIL*TLFSRRHPFLA
Trigger: TGCTAAGAAAGGGTGCCTTCGGGAGAAGAGTGTCCAGAGGATACCAATGCCAGATGCATCTGGAGTTACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396987.7
ENST00000519853.5
ENST00000520223.1
ENST00000520258.1
ENST00000521121.1
ENST00000521184.1
CDS CCA 72 bp GGAGAGCTACAGTCTTTGCCAGAAGGAAAGAGATGCTaGCACACAATGTCTCATACTGCGAGTGCTGAGTGT +
Preference number: 6 (lower is better)
Translates to: GELQSLPEGKRC*HTMSHTASAEC
Trigger: ACACTCAGCACTCGCAGTATGAGACATTGTGTGCCAGCATCTCTTTCCTTCTGGCAAAGACTGTAGCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396987.7
ENST00000519853.5
ENST00000520223.1
ENST00000520258.1
ENST00000521121.1
ENST00000521184.1
CDS TCA 72 bp AAATGTAAGCAGGCCTATCAGAACCAGAGATCCTTTTaGTTCCAGCTGACAGTGAGCCATGGGTCTGGCTCT +
Preference number: 6 (lower is better)
Translates to: KCKQAYQNQRSF*FQLTVSHGSGS
Trigger: AGAGCCAGACCCATGGCTCACTGTCAGCTGGAATCAAAAGGATCTCTGGTTCTGATAGGCCTGCTTACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519921.5
CDS GCA 72 bp ATGTCTCATACTGCGAGTGCTGAGTGTAACTCCAGATaGATCTGGCATTGGTATCCTCTGGACACTCTTCTC +
Preference number: 6 (lower is better)
Translates to: MSHTASAECNSR*IWHWYPLDTLL
Trigger: GAGAAGAGTGTCCAGAGGATACCAATGCCAGATGCATCTGGAGTTACACTCAGCACTCGCAGTATGAGACAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396987.7
ENST00000519853.5
ENST00000520223.1
ENST00000520258.1
ENST00000521121.1
ENST00000521184.1
CDS GCA 72 bp TCACATCGATCGGTGAGGTATGATTGGCCACACAGATaGCACCATTTCTTGGTCTGTTTTCCCTGTCATGGT +
Preference number: 6 (lower is better)
Translates to: SHRSVRYDWPHR*HHFLVCFPCHG
Trigger: ACCATGACAGGGAAAACAGACCAAGAAATGGTGGCATCTGTGTGGCCAATCATACCTCACCGATCGATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396987.7
ENST00000519921.5
ENST00000523906.1
CDS CCA 72 bp GCTGCTTACATGCTGCCAAAGAGAGAAGACAGAACATaGTCAGGTTCGGGGCCTTGGTCTTATCTAAGATCA +
Preference number: 6 (lower is better)
Translates to: AAYMLPKREDRT*SGSGPWSYLRS
Trigger: TGATCTTAGATAAGACCAAGGCCCCGAACCTGACCATGTTCTGTCTTCTCTCTTTGGCAGCATGTAAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520258.1
ENST00000521121.1
CDS CAA 72 bp TTCAGGCCCCCATCCCTTTCTAAGAATGGTTCAATTTaGCCAGATACACTGGGACCTGGGAAAGTCCTCCTT +
Preference number: 6 (lower is better)
Translates to: FRPPSLSKNGSI*PDTLGPGKVLL
Trigger: AAGGAGGACTTTCCCAGGTCCCAGTGTATCTGGCAAAATTGAACCATTCTTAGAAAGGGATGGGGGCCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518628.1
CDS CAA 90 bp CATGCTGCCAAAGAGAGAAGACAGAACATGGTCAGGTTCGGGGCCTaGGTCTTATCTAAGATCATTATGCCCTCCAGAACTTTCTTGAGT +
Preference number: 6 (lower is better)
Translates to: HAAKERRQNMVRFGA*VLSKIIMPSRTFLS
Trigger: ACTCAAGAAAGTTCTGGAGGGCATAATGATCTTAGATAAGACCAAGGCCCCGAACCTGACCATGTTCTGTCTTCTCTCTTTGGCAGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520258.1
ENST00000521121.1
CDS CCA 72 bp AAGAGAGAAGACAGAACATGGTCAGGTTCGGGGCCTTaGTCTTATCTAAGATCATTATGCCCTCCAGAACTT +
Preference number: 6 (lower is better)
Translates to: KREDRTWSGSGP*SYLRSLCPPEL
Trigger: AAGTTCTGGAGGGCATAATGATCTTAGATAAGACCAAGGCCCCGAACCTGACCATGTTCTGTCTTCTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520258.1
ENST00000521121.1
CDS CAA 72 bp AAAGAGAGAAGACAGAACATGGTCAGGTTCGGGGCCTaGGTCTTATCTAAGATCATTATGCCCTCCAGAACT +
Preference number: 6 (lower is better)
Translates to: KERRQNMVRFGA*VLSKIIMPSRT
Trigger: AGTTCTGGAGGGCATAATGATCTTAGATAAGACCAAGGCCCCGAACCTGACCATGTTCTGTCTTCTCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520258.1
ENST00000521121.1
CDS TCA 72 bp AGAGCTGACAAGTTTAATTCTCCACACCACGGGGAATaGCATGTAAGTGAAGTCAATGACACAGCATCTGCT +
Preference number: 6 (lower is better)
Translates to: RADKFNSPHHGE*HVSEVNDTASA
Trigger: AGCAGATGCTGTGTCATTGACTTCACTTACATGTCATTCCCCGTGGTGTGGAGAATTAAACTTGTCAGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518628.1
CDS CCA 72 bp CAGAATGGATGGACTCTAAAGATGATTGAAGCTAGATaGGTCTTCAGTAAAAGCATCCGAGTCCAGATGGAG +
Preference number: 6 (lower is better)
Translates to: QNGWTLKMIEAR*VFSKSIRVQME
Trigger: CTCCATCTGGACTCGGATGCTTTTACTGAAGACCCATCTAGCTTCAATCATCTTTAGAGTCCATCCATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396987.7
ENST00000520223.1
ENST00000520258.1
CDS CCA 72 bp CCCTTTCTAAGAATGGTTCAATTTTGCCAGATACACTaGGACCTGGGAAAGTCCTCCTTCCTTCTTGAAGTT +
Preference number: 6 (lower is better)
Translates to: PFLRMVQFCQIH*DLGKSSFLLEV
Trigger: AACTTCAAGAAGGAAGGAGGACTTTCCCAGGTCCCAGTGTATCTGGCAAAATTGAACCATTCTTAGAAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518628.1