RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPAT3 (Homo sapiens)

Ensembl gene IDs: ENSG00000138678

Ensembl transcript IDs: ENST00000264409.5, ENST00000395226.6, ENST00000506766.5, ENST00000509044.1, ENST00000509412.1, ENST00000513683.1, ENST00000514309.5, ENST00000611707.4

Found 260 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TATTTCTCTTCCAACACACTAATGACACTAATTTACATTTCCTTTTaGCTTTCAGAGCAGGTGGCCACAAAGTTGTCCCTTTTCCTAAAT +
Preference number: 1 (lower is better)
Translates to: YFSSNTLMTLIYISF*LSEQVATKLSLFLN
Trigger: ATTTAGGAAAAGGGACAACTTTGTGGCCACCTGCTCTGAAAGTCAAAAGGAAATGTAAATTAGTGTCATTAGTGTGTTGGAAGAGAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
3UTR-3UTR GCA 90 bp AAGGGGTGGAGGGTGAGGGGTAGCTCCACACACTCTCATTCATTCATACTGAAGATGTGGTCTACGAGCTaGCTACATATAAATGCGCAC +
Preference number: 2 (lower is better)
Translates to: KGWRVRGSSTHSHSFILKMWSTS*LHINAH
Trigger: GTGCGCATTTATATGTAGGCAGCTCGTAGACCACAT...CTTCAGTATGAATGAATGAGAGTGTGTGGAGCTACCCCTCACCCTCCACCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
3UTR-3UTR TCA 90 bp AAGGGGTGGAGGGTGAGGGGTAGCTCCACACACTCTCATTCATTCATACTGAAGATCTCACCATTTAAGTaGCTGAAGAAAGTGGCAAGG +
Preference number: 2 (lower is better)
Translates to: KGWRVRGSSTHSHSFILKISPFK*LKKVAR
Trigger: CCTTGCCACTTTCTTCAGTCACTTAAATGGTGAGAT...CTTCAGTATGAATGAATGAGAGTGTGTGGAGCTACCCCTCACCCTCCACCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
3UTR-3UTR GCA 90 bp AAGGGGTGGAGGGTGAGGGGTAGCTCCACACACTCTCATTCATTCATACTGAAGCTGCCTACATATAAATaGGCACACACATTAACTTTG +
Preference number: 2 (lower is better)
Translates to: KGWRVRGSSTHSHSFILKLPTYK*AHTLTL
Trigger: CAAAGTTAATGTGTGTGCGCATTTATATGTAGGCAG...CTTCAGTATGAATGAATGAGAGTGTGTGGAGCTACCCCTCACCCTCCACCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
3UTR-3UTR CCA 90 bp GTGGTCTACGAGCTGCCTACATATAAATGCGCACACACATTAACTTTGACTCACGACTTTCAGAGCAGGTaGCCACAAAGTTGTCCCTTT +
Preference number: 2 (lower is better)
Translates to: VVYELPTYKCAHTLTLTHDFQSR*PQSCPF
Trigger: AAAGGGACAACTTTGTGGCCACCTGCTCTGAAAGTC...GTGAGTCAAAGTTAATGTGTGTGCGCATTTATATGTAGGCAGCTCGTAGACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
3UTR-3UTR GCA 90 bp TATATTGCTGTCAAACATTGCTTATGCTGTGTGAGTTGGGGAAAACTTATTTCCGGCACCTGTAGGTTCTaGCTCTGGCATAAAGAGGTA +
Preference number: 2 (lower is better)
Translates to: YIAVKHCLCCVSWGKLISGTCRF*LWHKEV
Trigger: TACCTCTTTATGCCAGAGGCAGAACCTACAGGTGCC...GGAAATAAGTTTTCCCCAACTCACACAGCATAAGCAATGTTTGACAGCAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
3UTR-3UTR TCA 90 bp GTGGTCTACGAGCTGCCTACATATAAATGCGCACACACATTAACTTTGACTCACTCATTCAGTCCACAGTaGTGCCATCATTTTACAAAA +
Preference number: 2 (lower is better)
Translates to: VVYELPTYKCAHTLTLTHSFSPQ*CHHFTK
Trigger: TTTTGTAAAATGATGGCATCACTGTGGACTGAATGA...GTGAGTCAAAGTTAATGTGTGTGCGCATTTATATGTAGGCAGCTCGTAGACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
3UTR-3UTR GCA 90 bp TTTTTGGAGAATTACCCTATCGATGAGTTCCAAACACACTTTTCAAGCACTTTTGGCACCTGTAGGTTCTaGCTCTGGCATAAAGAGGTA +
Preference number: 2 (lower is better)
Translates to: FLENYPIDEFQTHFSSTFGTCRF*LWHKEV
Trigger: TACCTCTTTATGCCAGAGGCAGAACCTACAGGTGCC...AAAAGTGCTTGAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTCTCCAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
3UTR-3UTR CCA 90 bp TATATTGCTGTCAAACATTGCTTATGCTGTGTGAGTTGGGGAAAACTTATTTCCGACTTTCAGAGCAGGTaGCCACAAAGTTGTCCCTTT +
Preference number: 2 (lower is better)
Translates to: YIAVKHCLCCVSWGKLISDFQSR*PQSCPF
Trigger: AAAGGGACAACTTTGTGGCCACCTGCTCTGAAAGTC...GGAAATAAGTTTTCCCCAACTCACACAGCATAAGCAATGTTTGACAGCAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
3UTR-3UTR GCA 90 bp ACAGTTTCACATTCTGTACATGGTTACCAGAACAGATACAATACTCTCAGTAGTATGTGGTCTACGAGCTaGCTACATATAAATGCGCAC +
Preference number: 2 (lower is better)
Translates to: TVSHSVHGYQNRYNTLSSMWSTS*LHINAH
Trigger: GTGCGCATTTATATGTAGGCAGCTCGTAGACCACAT...ACTACTGAGAGTATTGTATCTGTTCTGGTAACCATGTACAGAATGTGAAACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
3UTR-3UTR CCA 90 bp TATATTGCTGTCAAACATTGCTTATGCTGTGTGAGTTGGGGAAAACTTATTTCCTGTAGGTTCTGCCTCTaGCATAAAGAGGTAGAGACA +
Preference number: 2 (lower is better)
Translates to: YIAVKHCLCCVSWGKLISCRFCL*HKEVET
Trigger: TGTCTCTACCTCTTTATGCCAGAGGCAGAACCTACA...GGAAATAAGTTTTCCCCAACTCACACAGCATAAGCAATGTTTGACAGCAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
3UTR-3UTR CCA 90 bp ACAGTTTCACATTCTGTACATGGTTACCAGAACAGATACAATACTCTCAGTAGTTGTAGGTTCTGCCTCTaGCATAAAGAGGTAGAGACA +
Preference number: 2 (lower is better)
Translates to: TVSHSVHGYQNRYNTLSSCRFCL*HKEVET
Trigger: TGTCTCTACCTCTTTATGCCAGAGGCAGAACCTACA...ACTACTGAGAGTATTGTATCTGTTCTGGTAACCATGTACAGAATGTGAAACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
3UTR-3UTR TCA 90 bp ACAGTTTCACATTCTGTACATGGTTACCAGAACAGATACAATACTCTCAGTAGTATCTCACCATTTAAGTaGCTGAAGAAAGTGGCAAGG +
Preference number: 2 (lower is better)
Translates to: TVSHSVHGYQNRYNTLSSISPFK*LKKVAR
Trigger: CCTTGCCACTTTCTTCAGTCACTTAAATGGTGAGAT...ACTACTGAGAGTATTGTATCTGTTCTGGTAACCATGTACAGAATGTGAAACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
3UTR-3UTR TCA 90 bp TATATTGCTGTCAAACATTGCTTATGCTGTGTGAGTTGGGGAAAACTTATTTCCATCTCACCATTTAAGTaGCTGAAGAAAGTGGCAAGG +
Preference number: 2 (lower is better)
Translates to: YIAVKHCLCCVSWGKLISISPFK*LKKVAR
Trigger: CCTTGCCACTTTCTTCAGTCACTTAAATGGTGAGAT...GGAAATAAGTTTTCCCCAACTCACACAGCATAAGCAATGTTTGACAGCAATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
3UTR-3UTR TCA 90 bp TATATTGCTGTCAAACATTGCTTATGCTGTGTGAGTTGGGGAAAACTTATTTCCATTTACATTTCCTTTTaGCTTTCAGAGCAGGTGGCC +
Preference number: 2 (lower is better)
Translates to: YIAVKHCLCCVSWGKLISIYISF*LSEQVA
Trigger: GGCCACCTGCTCTGAAAGTCAAAAGGAAATGTAAAT...GGAAATAAGTTTTCCCCAACTCACACAGCATAAGCAATGTTTGACAGCAATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
3UTR-3UTR CCA 90 bp TTTTTGGAGAATTACCCTATCGATGAGTTCCAAACACACTTTTCAAGCACTTTTTGTAGGTTCTGCCTCTaGCATAAAGAGGTAGAGACA +
Preference number: 2 (lower is better)
Translates to: FLENYPIDEFQTHFSSTFCRFCL*HKEVET
Trigger: TGTCTCTACCTCTTTATGCCAGAGGCAGAACCTACA...AAAAGTGCTTGAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTCTCCAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
3UTR-3UTR CCA 90 bp ACAGTTTCACATTCTGTACATGGTTACCAGAACAGATACAATACTCTCAGTAGTTTGCTGGTTAAAATGTaGTCTACGAGCTGCCTACAT +
Preference number: 2 (lower is better)
Translates to: TVSHSVHGYQNRYNTLSSLLVKM*STSCLH
Trigger: ATGTAGGCAGCTCGTAGACCACATTTTAACCAGCAA...ACTACTGAGAGTATTGTATCTGTTCTGGTAACCATGTACAGAATGTGAAACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
3UTR-3UTR GCA 90 bp ACAGTTTCACATTCTGTACATGGTTACCAGAACAGATACAATACTCTCAGTAGTGTCAAACATTGCTTATaGTGTGTGAGTTGGGGAAAA +
Preference number: 2 (lower is better)
Translates to: TVSHSVHGYQNRYNTLSSVKHCL*CVSWGK
Trigger: TTTTCCCCAACTCACACAGCATAAGCAATGTTTGAC...ACTACTGAGAGTATTGTATCTGTTCTGGTAACCATGTACAGAATGTGAAACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
3UTR-3UTR CCA 90 bp TATATTGCTGTCAAACATTGCTTATGCTGTGTGAGTTGGGGAAAACTTATTTCCGAGTTTGGGCATTTTTaGAGAATTACCCTATCGATG +
Preference number: 2 (lower is better)
Translates to: YIAVKHCLCCVSWGKLISEFGHF*RITLSM
Trigger: CATCGATAGGGTAATTCTCCAAAAATGCCCAAACTC...GGAAATAAGTTTTCCCCAACTCACACAGCATAAGCAATGTTTGACAGCAATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
3UTR-3UTR CCA 90 bp ACAGTTTCACATTCTGTACATGGTTACCAGAACAGATACAATACTCTCAGTAGTGAGTTTGGGCATTTTTaGAGAATTACCCTATCGATG +
Preference number: 2 (lower is better)
Translates to: TVSHSVHGYQNRYNTLSSEFGHF*RITLSM
Trigger: CATCGATAGGGTAATTCTCCAAAAATGCCCAAACTC...ACTACTGAGAGTATTGTATCTGTTCTGGTAACCATGTACAGAATGTGAAACTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
3UTR-3UTR TCA 90 bp ACAGTTTCACATTCTGTACATGGTTACCAGAACAGATACAATACTCTCAGTAGTTCATTCAGTCCACAGTaGTGCCATCATTTTACAAAA +
Preference number: 2 (lower is better)
Translates to: TVSHSVHGYQNRYNTLSSSFSPQ*CHHFTK
Trigger: TTTTGTAAAATGATGGCATCACTGTGGACTGAATGA...ACTACTGAGAGTATTGTATCTGTTCTGGTAACCATGTACAGAATGTGAAACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
3UTR-3UTR CAA 90 bp AAGGGGTGGAGGGTGAGGGGTAGCTCCACACACTCTCATTCATTCATACTGAAGCAGGTGGCCACAAAGTaGTCCCTTTTCCTAAATACA +
Preference number: 3 (lower is better)
Translates to: KGWRVRGSSTHSHSFILKQVATK*SLFLNT
Trigger: TGTATTTAGGAAAAGGGACAACTTTGTGGCCACCTG...CTTCAGTATGAATGAATGAGAGTGTGTGGAGCTACCCCTCACCCTCCACCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
3UTR-3UTR CAA 90 bp AAGGGGTGGAGGGTGAGGGGTAGCTCCACACACTCTCATTCATTCATACTGAAGGCTCTTTGTTACCAGTaGCTGGTTAAAATGTGGTCT +
Preference number: 3 (lower is better)
Translates to: KGWRVRGSSTHSHSFILKALCYQ*LVKMWS
Trigger: AGACCACATTTTAACCAGCAACTGGTAACAAAGAGC...CTTCAGTATGAATGAATGAGAGTGTGTGGAGCTACCCCTCACCCTCCACCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
3UTR-3UTR CAA 90 bp GTGGTCTACGAGCTGCCTACATATAAATGCGCACACACATTAACTTTGACTCACAGAGTTTGGGCATTTTaGGAGAATTACCCTATCGAT +
Preference number: 3 (lower is better)
Translates to: VVYELPTYKCAHTLTLTHRVWAF*ENYPID
Trigger: ATCGATAGGGTAATTCTCCAAAAATGCCCAAACTCT...GTGAGTCAAAGTTAATGTGTGTGCGCATTTATATGTAGGCAGCTCGTAGACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
3UTR-3UTR CAA 90 bp TATATTGCTGTCAAACATTGCTTATGCTGTGTGAGTTGGGGAAAACTTATTTCCCAGGTGGCCACAAAGTaGTCCCTTTTCCTAAATACA +
Preference number: 3 (lower is better)
Translates to: YIAVKHCLCCVSWGKLISQVATK*SLFLNT
Trigger: TGTATTTAGGAAAAGGGACAACTTTGTGGCCACCTG...GGAAATAAGTTTTCCCCAACTCACACAGCATAAGCAATGTTTGACAGCAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
3UTR-3UTR CAA 90 bp TATATTGCTGTCAAACATTGCTTATGCTGTGTGAGTTGGGGAAAACTTATTTCCGCACACACATTAACTTaGACTCACTTTTCTTTGGCG +
Preference number: 3 (lower is better)
Translates to: YIAVKHCLCCVSWGKLISAHTLT*THFSLA
Trigger: CGCCAAAGAAAAGTGAGTCAAAGTTAATGTGTGTGC...GGAAATAAGTTTTCCCCAACTCACACAGCATAAGCAATGTTTGACAGCAATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
3UTR-3UTR CAA 90 bp TATATTGCTGTCAAACATTGCTTATGCTGTGTGAGTTGGGGAAAACTTATTTCCGCTCTTTGTTACCAGTaGCTGGTTAAAATGTGGTCT +
Preference number: 3 (lower is better)
Translates to: YIAVKHCLCCVSWGKLISALCYQ*LVKMWS
Trigger: AGACCACATTTTAACCAGCAACTGGTAACAAAGAGC...GGAAATAAGTTTTCCCCAACTCACACAGCATAAGCAATGTTTGACAGCAATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
3UTR-3UTR CAA 90 bp TATATTGCTGTCAAACATTGCTTATGCTGTGTGAGTTGGGGAAAACTTATTTCCAGAGTTTGGGCATTTTaGGAGAATTACCCTATCGAT +
Preference number: 3 (lower is better)
Translates to: YIAVKHCLCCVSWGKLISRVWAF*ENYPID
Trigger: ATCGATAGGGTAATTCTCCAAAAATGCCCAAACTCT...GGAAATAAGTTTTCCCCAACTCACACAGCATAAGCAATGTTTGACAGCAATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp AAGGGGTGGAGGGTGAGGGGTAGCTCCACACACTCTCATTCATTCATACTGAAGCGGCGTGCGGAGACCTaGGTAGCGCGAGCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: KGWRVRGSSTHSHSFILKRRAET*VARASG
Trigger: ACCACTGGCTCGCGCTACCCAGGTCTCCGCACGCCG...CTTCAGTATGAATGAATGAGAGTGTGTGGAGCTACCCCTCACCCTCCACCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264409.5
CDS-3UTR CCA 90 bp AAGGGGTGGAGGGTGAGGGGTAGCTCCACACACTCTCATTCATTCATACTGAAGAGGAGAGGTCCGCAGTaGAGGGCCGAGCGCCACAGC +
Preference number: 4 (lower is better)
Translates to: KGWRVRGSSTHSHSFILKRRGPQ*RAERHS
Trigger: GCTGTGGCGCTCGGCCCTCCACTGCGGACCTCTCCT...CTTCAGTATGAATGAATGAGAGTGTGTGGAGCTACCCCTCACCCTCCACCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp ACAAAAGCCAAAAAGGGCACCTGTAGGTTCTGCCTCTGGCATAAAGAGGTAGAGCTGGCTGCCCAGGTCTaGGCTGAAGCCACCGCGGCG +
Preference number: 4 (lower is better)
Translates to: TKAKKGTCRFCLWHKEVELAAQV*AEATAA
Trigger: CGCCGCGGTGGCTTCAGCCCAGACCTGGGCAGCCAG...CTCTACCTCTTTATGCCAGAGGCAGAACCTACAGGTGCCCTTTTTGGCTTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264409.5
CDS-3UTR TCA 90 bp AAGGGGTGGAGGGTGAGGGGTAGCTCCACACACTCTCATTCATTCATACTGAAGCGACAACTCAGCAGATaGCTCACGGAGGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: KGWRVRGSSTHSHSFILKRQLSR*LTEALP
Trigger: GGGGAGGGCCTCCGTGAGTCATCTGCTGAGTTGTCG...CTTCAGTATGAATGAATGAGAGTGTGTGGAGCTACCCCTCACCCTCCACCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264409.5
CDS-3UTR TCA 90 bp ACAAAAGCCAAAAAGGGCACCTGTAGGTTCTGCCTCTGGCATAAAGAGGTAGAGGCTCTGCGCCCTCCATaGCTCGGCGCACCCACTCAG +
Preference number: 4 (lower is better)
Translates to: TKAKKGTCRFCLWHKEVEALRPP*LGAPTQ
Trigger: CTGAGTGGGTGCGCCGAGTCATGGAGGGCGCAGAGC...CTCTACCTCTTTATGCCAGAGGCAGAACCTACAGGTGCCCTTTTTGGCTTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp ACAAAAGCCAAAAAGGGCACCTGTAGGTTCTGCCTCTGGCATAAAGAGGTAGAGAGGAGAGGTCCGCAGTaGAGGGCCGAGCGCCACAGC +
Preference number: 4 (lower is better)
Translates to: TKAKKGTCRFCLWHKEVERRGPQ*RAERHS
Trigger: GCTGTGGCGCTCGGCCCTCCACTGCGGACCTCTCCT...CTCTACCTCTTTATGCCAGAGGCAGAACCTACAGGTGCCCTTTTTGGCTTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR GCA 90 bp ACAAAAGCCAAAAAGGGCACCTGTAGGTTCTGCCTCTGGCATAAAGAGGTAGAGCCTTTAGCCCAGGAGTaGCGCAGCCTCCTGGGCGGT +
Preference number: 4 (lower is better)
Translates to: TKAKKGTCRFCLWHKEVEPLAQE*RSLLGG
Trigger: ACCGCCCAGGAGGCTGCGGCACTCCTGGGCTAAAGG...CTCTACCTCTTTATGCCAGAGGCAGAACCTACAGGTGCCCTTTTTGGCTTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611707.4
CDS-3UTR CCA 90 bp AAGGGGTGGAGGGTGAGGGGTAGCTCCACACACTCTCATTCATTCATACTGAAGCCAGCGTCAGCCAGGTaGAAAGGATCTTCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: KGWRVRGSSTHSHSFILKPASAR*KGSSRP
Trigger: TGGCCGGGAAGATCCTTTCCACCTGGCTGACGCTGG...CTTCAGTATGAATGAATGAGAGTGTGTGGAGCTACCCCTCACCCTCCACCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp ACAAAAGCCAAAAAGGGCACCTGTAGGTTCTGCCTCTGGCATAAAGAGGTAGAGAGTGCCGCAGCCTCCTaGGCGGTCTCCGTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: TKAKKGTCRFCLWHKEVESAAAS*AVSVLP
Trigger: GGGAAGAACGGAGACCGCCCAGGAGGCTGCGGCACT...CTCTACCTCTTTATGCCAGAGGCAGAACCTACAGGTGCCCTTTTTGGCTTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611707.4
CDS-3UTR TCA 90 bp AAGGGGTGGAGGGTGAGGGGTAGCTCCACACACTCTCATTCATTCATACTGAAGCACAATAGCGCACTATaGCGCCCAGCACCCACACCA +
Preference number: 4 (lower is better)
Translates to: KGWRVRGSSTHSHSFILKHNSAL*RPAPTP
Trigger: TGGTGTGGGTGCTGGGCGTCATAGTGCGCTATTGTG...CTTCAGTATGAATGAATGAGAGTGTGTGGAGCTACCCCTCACCCTCCACCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR GCA 90 bp GTGGTCTACGAGCTGCCTACATATAAATGCGCACACACATTAACTTTGACTCACACCCGCCCCGCCCGGTaGCTGATTTCCTCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: VVYELPTYKCAHTLTLTHTRPAR*LISSGW
Trigger: CCACCCAGAGGAAATCAGGCACCGGGCGGGGCGGGT...GTGAGTCAAAGTTAATGTGTGTGCGCATTTATATGTAGGCAGCTCGTAGACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264409.5
CDS-3UTR GCA 90 bp GTGGTCTACGAGCTGCCTACATATAAATGCGCACACACATTAACTTTGACTCACCCGAGCCAGGTTCCCTaGGGGAGCACCGCACTTTGG +
Preference number: 4 (lower is better)
Translates to: VVYELPTYKCAHTLTLTHPSQVP*GSTALW
Trigger: CCAAAGTGCGGTGCTCCCGCAGGGAACCTGGCTCGG...GTGAGTCAAAGTTAATGTGTGTGCGCATTTATATGTAGGCAGCTCGTAGACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264409.5
ENST00000395226.6
CDS-3UTR CCA 90 bp ACAAAAGCCAAAAAGGGCACCTGTAGGTTCTGCCTCTGGCATAAAGAGGTAGAGCCAGCGTCAGCCAGGTaGAAAGGATCTTCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: TKAKKGTCRFCLWHKEVEPASAR*KGSSRP
Trigger: TGGCCGGGAAGATCCTTTCCACCTGGCTGACGCTGG...CTCTACCTCTTTATGCCAGAGGCAGAACCTACAGGTGCCCTTTTTGGCTTTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp TCAGTAAACCACCTTACAATCCATGGGGCTAATGTTACAACAACAACAAAAGCCGCTCTGCGCCCTCCATaGCTCGGCGCACCCACTCAG +
Preference number: 4 (lower is better)
Translates to: SVNHLTIHGANVTTTTKAALRPP*LGAPTQ
Trigger: CTGAGTGGGTGCGCCGAGTCATGGAGGGCGCAGAGC...GGCTTTTGTTGTTGTTGTAACATTAGCCCCATGGATTGTAAGGTGGTTTACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp AAGGGGTGGAGGGTGAGGGGTAGCTCCACACACTCTCATTCATTCATACTGAAGCCGAAGGTAAAAGGATaGAGCCGAGAACCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: KGWRVRGSSTHSHSFILKPKVKG*SREPAS
Trigger: TGACGCTGGTTCTCGGCTTCATCCTTTTACCTTCGG...CTTCAGTATGAATGAATGAGAGTGTGTGGAGCTACCCCTCACCCTCCACCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR GCA 90 bp TCAGTAAACCACCTTACAATCCATGGGGCTAATGTTACAACAACAACAAAAGCCCTTCCCGGCCAGCTCTaGGCCCTCCATGACTCGGCG +
Preference number: 4 (lower is better)
Translates to: SVNHLTIHGANVTTTTKALPGQL*ALHDSA
Trigger: CGCCGAGTCATGGAGGGCGCAGAGCTGGCCGGGAAG...GGCTTTTGTTGTTGTTGTAACATTAGCCCCATGGATTGTAAGGTGGTTTACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp AAGGGGTGGAGGGTGAGGGGTAGCTCCACACACTCTCATTCATTCATACTGAAGCTGATTTCCTCTGGGTaGCGATTGCGACAACTCAGC +
Preference number: 4 (lower is better)
Translates to: KGWRVRGSSTHSHSFILKLISSG*RLRQLS
Trigger: GCTGAGTTGTCGCAATCGCCACCCAGAGGAAATCAG...CTTCAGTATGAATGAATGAGAGTGTGTGGAGCTACCCCTCACCCTCCACCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264409.5
CDS-3UTR CCA 90 bp TCAGTAAACCACCTTACAATCCATGGGGCTAATGTTACAACAACAACAAAAGCCAGGAGAGGTCCGCAGTaGAGGGCCGAGCGCCACAGC +
Preference number: 4 (lower is better)
Translates to: SVNHLTIHGANVTTTTKARRGPQ*RAERHS
Trigger: GCTGTGGCGCTCGGCCCTCCACTGCGGACCTCTCCT...GGCTTTTGTTGTTGTTGTAACATTAGCCCCATGGATTGTAAGGTGGTTTACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp AAGGGGTGGAGGGTGAGGGGTAGCTCCACACACTCTCATTCATTCATACTGAAGATCCGTCCTCTTAGCTaGGAGATCCATTGCCCACAA +
Preference number: 4 (lower is better)
Translates to: KGWRVRGSSTHSHSFILKIRPLS*EIHCPQ
Trigger: TTGTGGGCAATGGATCTCTCAGCTAAGAGGACGGAT...CTTCAGTATGAATGAATGAGAGTGTGTGGAGCTACCCCTCACCCTCCACCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp GTGGTCTACGAGCTGCCTACATATAAATGCGCACACACATTAACTTTGACTCACCAAAGGGGTGGAGGGTaGGGGGTAGCTCCACACACT +
Preference number: 4 (lower is better)
Translates to: VVYELPTYKCAHTLTLTHQRGGG*GVAPHT
Trigger: AGTGTGTGGAGCTACCCCTCACCCTCCACCCCTTTG...GTGAGTCAAAGTTAATGTGTGTGCGCATTTATATGTAGGCAGCTCGTAGACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR GCA 90 bp TCAGTAAACCACCTTACAATCCATGGGGCTAATGTTACAACAACAACAAAAGCCCCGAGCCAGGTTCCCTaGGGGAGCACCGCACTTTGG +
Preference number: 4 (lower is better)
Translates to: SVNHLTIHGANVTTTTKAPSQVP*GSTALW
Trigger: CCAAAGTGCGGTGCTCCCGCAGGGAACCTGGCTCGG...GGCTTTTGTTGTTGTTGTAACATTAGCCCCATGGATTGTAAGGTGGTTTACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000264409.5
ENST00000395226.6
CDS-3UTR GCA 90 bp GTGGTCTACGAGCTGCCTACATATAAATGCGCACACACATTAACTTTGACTCACCCCGGCACTCACCTCTaGGAAGGGAAGAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: VVYELPTYKCAHTLTLTHPGTHL*EGKRGR
Trigger: CCTTCCTCTCTTCCCTTCGCAGAGGTGAGTGCCGGG...GTGAGTCAAAGTTAATGTGTGTGCGCATTTATATGTAGGCAGCTCGTAGACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264409.5
CDS-3UTR CCA 90 bp TATATTGCTGTCAAACATTGCTTATGCTGTGTGAGTTGGGGAAAACTTATTTCCGGGAGCACCGCACTTTaGCACACCGGTCGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: YIAVKHCLCCVSWGKLISGSTAL*HTGRRR
Trigger: CCGCCGGCGACCGGTGTGCCAAAGTGCGGTGCTCCC...GGAAATAAGTTTTCCCCAACTCACACAGCATAAGCAATGTTTGACAGCAATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264409.5
ENST00000395226.6
CDS-3UTR CCA 90 bp TCAGTAAACCACCTTACAATCCATGGGGCTAATGTTACAACAACAACAAAAGCCGGTAGCGCGAGCCAGTaGTCGGAGCTGCGGGTAAGC +
Preference number: 4 (lower is better)
Translates to: SVNHLTIHGANVTTTTKAGSASQ*SELRVS
Trigger: GCTTACCCGCAGCTCCGACCACTGGCTCGCGCTACC...GGCTTTTGTTGTTGTTGTAACATTAGCCCCATGGATTGTAAGGTGGTTTACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264409.5
CDS-3UTR CCA 90 bp ACAGTTTCACATTCTGTACATGGTTACCAGAACAGATACAATACTCTCAGTAGTAGCCCGGCACTCACCTaGAGGCCCTCCCCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: TVSHSVHGYQNRYNTLSSSPALT*RPSPSQ
Trigger: CTGGCTCGGGGAGGGCCTCCAGGTGAGTGCCGGGCT...ACTACTGAGAGTATTGTATCTGTTCTGGTAACCATGTACAGAATGTGAAACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395226.6
CDS-3UTR TCA 90 bp ACAGTTTCACATTCTGTACATGGTTACCAGAACAGATACAATACTCTCAGTAGTGCCCCGCCCGGTGCCTaGTTTCCTCTGGGTGGCGAT +
Preference number: 4 (lower is better)
Translates to: TVSHSVHGYQNRYNTLSSAPPGA*FPLGGD
Trigger: ATCGCCACCCAGAGGAAATCAGGCACCGGGCGGGGC...ACTACTGAGAGTATTGTATCTGTTCTGGTAACCATGTACAGAATGTGAAACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264409.5
CDS-3UTR TCA 90 bp TATATTGCTGTCAAACATTGCTTATGCTGTGTGAGTTGGGGAAAACTTATTTCCGCTCTGCGCCCTCCATaGCTCGGCGCACCCACTCAG +
Preference number: 4 (lower is better)
Translates to: YIAVKHCLCCVSWGKLISALRPP*LGAPTQ
Trigger: CTGAGTGGGTGCGCCGAGTCATGGAGGGCGCAGAGC...GGAAATAAGTTTTCCCCAACTCACACAGCATAAGCAATGTTTGACAGCAATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp GTGGTCTACGAGCTGCCTACATATAAATGCGCACACACATTAACTTTGACTCACCCCATCAAGCCGCCATaGACCTGGCCAACCATAGCA +
Preference number: 4 (lower is better)
Translates to: VVYELPTYKCAHTLTLTHPIKPP*TWPTIA
Trigger: TGCTATGGTTGGCCAGGTTCATGGCGGCTTGATGGG...GTGAGTCAAAGTTAATGTGTGTGCGCATTTATATGTAGGCAGCTCGTAGACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp AAGGGGTGGAGGGTGAGGGGTAGCTCCACACACTCTCATTCATTCATACTGAAGCGTTCAAACCAGACATaGGGACAAGCCTTGACCATA +
Preference number: 4 (lower is better)
Translates to: KGWRVRGSSTHSHSFILKRSNQT*GQALTI
Trigger: TATGGTCAAGGCTTGTCCTCATGTCTGGTTTGAACG...CTTCAGTATGAATGAATGAGAGTGTGTGGAGCTACCCCTCACCCTCCACCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR GCA 90 bp TTTTTGGAGAATTACCCTATCGATGAGTTCCAAACACACTTTTCAAGCACTTTTGAAGCCACCGCGGCGTaGGGAGACCTGGGTAGCGCG +
Preference number: 4 (lower is better)
Translates to: FLENYPIDEFQTHFSSTFEATAA*GDLGSA
Trigger: CGCGCTACCCAGGTCTCCGCACGCCGCGGTGGCTTC...AAAAGTGCTTGAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTCTCCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264409.5
CDS-3UTR GCA 90 bp TATATTGCTGTCAAACATTGCTTATGCTGTGTGAGTTGGGGAAAACTTATTTCCCTTCCCGGCCAGCTCTaGGCCCTCCATGACTCGGCG +
Preference number: 4 (lower is better)
Translates to: YIAVKHCLCCVSWGKLISLPGQL*ALHDSA
Trigger: CGCCGAGTCATGGAGGGCGCAGAGCTGGCCGGGAAG...GGAAATAAGTTTTCCCCAACTCACACAGCATAAGCAATGTTTGACAGCAATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp TTTTTGGAGAATTACCCTATCGATGAGTTCCAAACACACTTTTCAAGCACTTTTGGGAGCACCGCACTTTaGCACACCGGTCGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: FLENYPIDEFQTHFSSTFGSTAL*HTGRRR
Trigger: CCGCCGGCGACCGGTGTGCCAAAGTGCGGTGCTCCC...AAAAGTGCTTGAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTCTCCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264409.5
ENST00000395226.6
CDS-3UTR TCA 90 bp AAGGGGTGGAGGGTGAGGGGTAGCTCCACACACTCTCATTCATTCATACTGAAGTTGACCATAGCTCTCTaGATAATTCCCATCAAGCCG +
Preference number: 4 (lower is better)
Translates to: KGWRVRGSSTHSHSFILKLTIAL*IIPIKP
Trigger: CGGCTTGATGGGAATTATTCAGAGAGCTATGGTCAA...CTTCAGTATGAATGAATGAGAGTGTGTGGAGCTACCCCTCACCCTCCACCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp TCAGTAAACCACCTTACAATCCATGGGGCTAATGTTACAACAACAACAAAAGCCCAAAGGGGTGGAGGGTaGGGGGTAGCTCCACACACT +
Preference number: 4 (lower is better)
Translates to: SVNHLTIHGANVTTTTKAQRGGG*GVAPHT
Trigger: AGTGTGTGGAGCTACCCCTCACCCTCCACCCCTTTG...GGCTTTTGTTGTTGTTGTAACATTAGCCCCATGGATTGTAAGGTGGTTTACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR GCA 90 bp GTGGTCTACGAGCTGCCTACATATAAATGCGCACACACATTAACTTTGACTCACCCTCTGGGTGGCGATTaGGACAACTCAGCAGATGAC +
Preference number: 4 (lower is better)
Translates to: VVYELPTYKCAHTLTLTHPLGGD*DNSADD
Trigger: GTCATCTGCTGAGTTGTCGCAATCGCCACCCAGAGG...GTGAGTCAAAGTTAATGTGTGTGCGCATTTATATGTAGGCAGCTCGTAGACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264409.5
CDS-3UTR CCA 90 bp GTGGTCTACGAGCTGCCTACATATAAATGCGCACACACATTAACTTTGACTCACCGGCAGCAAGTCAGATaGACCAGTTCACTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: VVYELPTYKCAHTLTLTHRQQVR*TSSLSQ
Trigger: CTGGCTGAGTGAACTGGTCCATCTGACTTGCTGCCG...GTGAGTCAAAGTTAATGTGTGTGCGCATTTATATGTAGGCAGCTCGTAGACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp ACAAAAGCCAAAAAGGGCACCTGTAGGTTCTGCCTCTGGCATAAAGAGGTAGAGTGGGGGAAGTATGGTTaGCAACACAAATGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: TKAKKGTCRFCLWHKEVEWGKYG*QHKCLP
Trigger: AGGGAGGCATTTGTGTTGCCAACCATACTTCCCCCA...CTCTACCTCTTTATGCCAGAGGCAGAACCTACAGGTGCCCTTTTTGGCTTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp AAGGGGTGGAGGGTGAGGGGTAGCTCCACACACTCTCATTCATTCATACTGAAGTCAATGGGGGAAGTATaGTTGGCAACACAAATGCCT +
Preference number: 4 (lower is better)
Translates to: KGWRVRGSSTHSHSFILKSMGEV*LATQMP
Trigger: AGGCATTTGTGTTGCCAACCATACTTCCCCCATTGA...CTTCAGTATGAATGAATGAGAGTGTGTGGAGCTACCCCTCACCCTCCACCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp GTGGTCTACGAGCTGCCTACATATAAATGCGCACACACATTAACTTTGACTCACCTTCCTCTCTGGTCATaGGGGGCATGTACCACACGT +
Preference number: 4 (lower is better)
Translates to: VVYELPTYKCAHTLTLTHLPLWS*GACTTR
Trigger: ACGTGTGGTACATGCCCCCCATGACCAGAGAGGAAG...GTGAGTCAAAGTTAATGTGTGTGCGCATTTATATGTAGGCAGCTCGTAGACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp GTGGTCTACGAGCTGCCTACATATAAATGCGCACACACATTAACTTTGACTCACCCGAAGGTAAAAGGATaGAGCCGAGAACCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: VVYELPTYKCAHTLTLTHPKVKG*SREPAS
Trigger: TGACGCTGGTTCTCGGCTTCATCCTTTTACCTTCGG...GTGAGTCAAAGTTAATGTGTGTGCGCATTTATATGTAGGCAGCTCGTAGACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp AAGGGGTGGAGGGTGAGGGGTAGCTCCACACACTCTCATTCATTCATACTGAAGCCCTTTTTCCATGGGTaGCTCATCTCTTTGGATAAT +
Preference number: 4 (lower is better)
Translates to: KGWRVRGSSTHSHSFILKPFFHG*LISLDN
Trigger: ATTATCCAAAGAGATGAGTCACCCATGGAAAAAGGG...CTTCAGTATGAATGAATGAGAGTGTGTGGAGCTACCCCTCACCCTCCACCCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp AAGGGGTGGAGGGTGAGGGGTAGCTCCACACACTCTCATTCATTCATACTGAAGTCTGAGGAAAACCTCTaGGTCACTTCATCTTCTACA +
Preference number: 4 (lower is better)
Translates to: KGWRVRGSSTHSHSFILKSEENL*VTSSST
Trigger: TGTAGAAGATGAAGTGACCCAGAGGTTTTCCTCAGA...CTTCAGTATGAATGAATGAGAGTGTGTGGAGCTACCCCTCACCCTCCACCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp ACAAAAGCCAAAAAGGGCACCTGTAGGTTCTGCCTCTGGCATAAAGAGGTAGAGCAAATGCCTCCCTTCTaGGGTCTGTACTGCTTGTTA +
Preference number: 4 (lower is better)
Translates to: TKAKKGTCRFCLWHKEVEQMPPF*GLYCLL
Trigger: TAACAAGCAGTACAGACCCCAGAAGGGAGGCATTTG...CTCTACCTCTTTATGCCAGAGGCAGAACCTACAGGTGCCCTTTTTGGCTTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp ACAAAAGCCAAAAAGGGCACCTGTAGGTTCTGCCTCTGGCATAAAGAGGTAGAGACCCTGTTAGCAAACTaGACTGCATCTTCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: TKAKKGTCRFCLWHKEVETLLAN*TASSPS
Trigger: GGAAGGAGAAGATGCAGTCCAGTTTGCTAACAGGGT...CTCTACCTCTTTATGCCAGAGGCAGAACCTACAGGTGCCCTTTTTGGCTTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp AAGGGGTGGAGGGTGAGGGGTAGCTCCACACACTCTCATTCATTCATACTGAAGTTATGCTGTGTGAGTTaGGGAAAACTTATTTCCCCC +
Preference number: 4 (lower is better)
Translates to: KGWRVRGSSTHSHSFILKLCCVS*GKLISP
Trigger: GGGGGAAATAAGTTTTCCCCAACTCACACAGCATAA...CTTCAGTATGAATGAATGAGAGTGTGTGGAGCTACCCCTCACCCTCCACCCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp AAGGGGTGGAGGGTGAGGGGTAGCTCCACACACTCTCATTCATTCATACTGAAGTTACATTGGTTCTTGTaGGGAGATTCCATGACACTA +
Preference number: 4 (lower is better)
Translates to: KGWRVRGSSTHSHSFILKLHWFL*GDSMTL
Trigger: TAGTGTCATGGAATCTCCTCACAAGAACCAATGTAA...CTTCAGTATGAATGAATGAGAGTGTGTGGAGCTACCCCTCACCCTCCACCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp ACAGTTTCACATTCTGTACATGGTTACCAGAACAGATACAATACTCTCAGTAGTCAAAGGGGTGGAGGGTaGGGGGTAGCTCCACACACT +
Preference number: 4 (lower is better)
Translates to: TVSHSVHGYQNRYNTLSSQRGGG*GVAPHT
Trigger: AGTGTGTGGAGCTACCCCTCACCCTCCACCCCTTTG...ACTACTGAGAGTATTGTATCTGTTCTGGTAACCATGTACAGAATGTGAAACTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR GCA 90 bp TCAGTAAACCACCTTACAATCCATGGGGCTAATGTTACAACAACAACAAAAGCCCTGCTGTCTGGCAGCTaGCCAACCAGTGTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: SVNHLTIHGANVTTTTKALLSGS*PTSVVP
Trigger: AGGAACTACACTGGTTGGGCAGCTGCCAGACAGCAG...GGCTTTTGTTGTTGTTGTAACATTAGCCCCATGGATTGTAAGGTGGTTTACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR GCA 90 bp AAGGGGTGGAGGGTGAGGGGTAGCTCCACACACTCTCATTCATTCATACTGAAGTGCCCACAATCATCTTaGTGTAATTTTTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: KGWRVRGSSTHSHSFILKCPQSS*CNFSAA
Trigger: AGCAGCAGAAAAATTACAGCAAGATGATTGTGGGCA...CTTCAGTATGAATGAATGAGAGTGTGTGGAGCTACCCCTCACCCTCCACCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR GCA 90 bp GTGGTCTACGAGCTGCCTACATATAAATGCGCACACACATTAACTTTGACTCACGGCACCTGTAGGTTCTaGCTCTGGCATAAAGAGGTA +
Preference number: 4 (lower is better)
Translates to: VVYELPTYKCAHTLTLTHGTCRF*LWHKEV
Trigger: TACCTCTTTATGCCAGAGGCAGAACCTACAGGTGCC...GTGAGTCAAAGTTAATGTGTGTGCGCATTTATATGTAGGCAGCTCGTAGACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR GCA 90 bp ACAAAAGCCAAAAAGGGCACCTGTAGGTTCTGCCTCTGGCATAAAGAGGTAGAGATGTGGTCTACGAGCTaGCTACATATAAATGCGCAC +
Preference number: 4 (lower is better)
Translates to: TKAKKGTCRFCLWHKEVEMWSTS*LHINAH
Trigger: GTGCGCATTTATATGTAGGCAGCTCGTAGACCACAT...CTCTACCTCTTTATGCCAGAGGCAGAACCTACAGGTGCCCTTTTTGGCTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR GCA 90 bp AAGGGGTGGAGGGTGAGGGGTAGCTCCACACACTCTCATTCATTCATACTGAAGATTGCTGTCAAACATTaGTTATGCTGTGTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: KGWRVRGSSTHSHSFILKIAVKH*LCCVSW
Trigger: CCAACTCACACAGCATAAGCAATGTTTGACAGCAAT...CTTCAGTATGAATGAATGAGAGTGTGTGGAGCTACCCCTCACCCTCCACCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp AAGGGGTGGAGGGTGAGGGGTAGCTCCACACACTCTCATTCATTCATACTGAAGGGTGACTCATCTCTTTaGATAATACCAACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: KGWRVRGSSTHSHSFILKGDSSL*IIPTEA
Trigger: TGCTTCTGTTGGTATTATCCAAAGAGATGAGTCACC...CTTCAGTATGAATGAATGAGAGTGTGTGGAGCTACCCCTCACCCTCCACCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp ACAAAAGCCAAAAAGGGCACCTGTAGGTTCTGCCTCTGGCATAAAGAGGTAGAGTCAATGGGGGAAGTATaGTTGGCAACACAAATGCCT +
Preference number: 4 (lower is better)
Translates to: TKAKKGTCRFCLWHKEVESMGEV*LATQMP
Trigger: AGGCATTTGTGTTGCCAACCATACTTCCCCCATTGA...CTCTACCTCTTTATGCCAGAGGCAGAACCTACAGGTGCCCTTTTTGGCTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp ACAGTTTCACATTCTGTACATGGTTACCAGAACAGATACAATACTCTCAGTAGTCCCATCAAGCCGCCATaGACCTGGCCAACCATAGCA +
Preference number: 4 (lower is better)
Translates to: TVSHSVHGYQNRYNTLSSPIKPP*TWPTIA
Trigger: TGCTATGGTTGGCCAGGTTCATGGCGGCTTGATGGG...ACTACTGAGAGTATTGTATCTGTTCTGGTAACCATGTACAGAATGTGAAACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp GTGGTCTACGAGCTGCCTACATATAAATGCGCACACACATTAACTTTGACTCACCGTTCAAACCAGACATaGGGACAAGCCTTGACCATA +
Preference number: 4 (lower is better)
Translates to: VVYELPTYKCAHTLTLTHRSNQT*GQALTI
Trigger: TATGGTCAAGGCTTGTCCTCATGTCTGGTTTGAACG...GTGAGTCAAAGTTAATGTGTGTGCGCATTTATATGTAGGCAGCTCGTAGACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp ACAAAAGCCAAAAAGGGCACCTGTAGGTTCTGCCTCTGGCATAAAGAGGTAGAGATTTACATTTCCTTTTaGCTTTCAGAGCAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: TKAKKGTCRFCLWHKEVEIYISF*LSEQVA
Trigger: GGCCACCTGCTCTGAAAGTCAAAAGGAAATGTAAAT...CTCTACCTCTTTATGCCAGAGGCAGAACCTACAGGTGCCCTTTTTGGCTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp AAGGGGTGGAGGGTGAGGGGTAGCTCCACACACTCTCATTCATTCATACTGAAGAAGGCTCCTTCTATCTaGAAATGTGTTTGGTTACAA +
Preference number: 4 (lower is better)
Translates to: KGWRVRGSSTHSHSFILKKAPSI*KCVWLQ
Trigger: TTGTAACCAAACACATTTTCAGATAGAAGGAGCCTT...CTTCAGTATGAATGAATGAGAGTGTGTGGAGCTACCCCTCACCCTCCACCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR GCA 90 bp ACAGTTTCACATTCTGTACATGGTTACCAGAACAGATACAATACTCTCAGTAGTGCTCCTCCTCGCCCCTaGCAGTTAACTCTTTCTCCG +
Preference number: 4 (lower is better)
Translates to: TVSHSVHGYQNRYNTLSSAPPRP*QLTLSP
Trigger: CGGAGAAAGAGTTAACTGGCAGGGGCGAGGAGGAGC...ACTACTGAGAGTATTGTATCTGTTCTGGTAACCATGTACAGAATGTGAAACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264409.5
CDS-3UTR GCA 90 bp ACAAAAGCCAAAAAGGGCACCTGTAGGTTCTGCCTCTGGCATAAAGAGGTAGAGACTACTGTTCCAAAATaGATCACCGAACTGAGGGTT +
Preference number: 4 (lower is better)
Translates to: TKAKKGTCRFCLWHKEVETTVPK*ITELRV
Trigger: AACCCTCAGTTCGGTGATGCATTTTGGAACAGTAGT...CTCTACCTCTTTATGCCAGAGGCAGAACCTACAGGTGCCCTTTTTGGCTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp TTTTTGGAGAATTACCCTATCGATGAGTTCCAAACACACTTTTCAAGCACTTTTCCAGCGTCAGCCAGGTaGAAAGGATCTTCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: FLENYPIDEFQTHFSSTFPASAR*KGSSRP
Trigger: TGGCCGGGAAGATCCTTTCCACCTGGCTGACGCTGG...AAAAGTGCTTGAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTCTCCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp ACAAAAGCCAAAAAGGGCACCTGTAGGTTCTGCCTCTGGCATAAAGAGGTAGAGCTTCATCTTCTACAATaGCTTCCAATCCCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: TKAKKGTCRFCLWHKEVELHLLQ*LPIPSW
Trigger: CCAAGAAGGGATTGGAAGCCATTGTAGAAGATGAAG...CTCTACCTCTTTATGCCAGAGGCAGAACCTACAGGTGCCCTTTTTGGCTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp AAGGGGTGGAGGGTGAGGGGTAGCTCCACACACTCTCATTCATTCATACTGAAGCGCAGACTGATGTACTaGAAATTTACATTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: KGWRVRGSSTHSHSFILKRRLMY*KFTLVL
Trigger: AAGAACCAATGTAAATTTCCAGTACATCAGTCTGCG...CTTCAGTATGAATGAATGAGAGTGTGTGGAGCTACCCCTCACCCTCCACCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp GTGGTCTACGAGCTGCCTACATATAAATGCGCACACACATTAACTTTGACTCACCAAATGCCTCCCTTCTaGGGTCTGTACTGCTTGTTA +
Preference number: 4 (lower is better)
Translates to: VVYELPTYKCAHTLTLTHQMPPF*GLYCLL
Trigger: TAACAAGCAGTACAGACCCCAGAAGGGAGGCATTTG...GTGAGTCAAAGTTAATGTGTGTGCGCATTTATATGTAGGCAGCTCGTAGACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp GTGGTCTACGAGCTGCCTACATATAAATGCGCACACACATTAACTTTGACTCACACCCTGTTAGCAAACTaGACTGCATCTTCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: VVYELPTYKCAHTLTLTHTLLAN*TASSPS
Trigger: GGAAGGAGAAGATGCAGTCCAGTTTGCTAACAGGGT...GTGAGTCAAAGTTAATGTGTGTGCGCATTTATATGTAGGCAGCTCGTAGACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp ACAAAAGCCAAAAAGGGCACCTGTAGGTTCTGCCTCTGGCATAAAGAGGTAGAGTTGCTGGTTAAAATGTaGTCTACGAGCTGCCTACAT +
Preference number: 4 (lower is better)
Translates to: TKAKKGTCRFCLWHKEVELLVKM*STSCLH
Trigger: ATGTAGGCAGCTCGTAGACCACATTTTAACCAGCAA...CTCTACCTCTTTATGCCAGAGGCAGAACCTACAGGTGCCCTTTTTGGCTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp TTTTTGGAGAATTACCCTATCGATGAGTTCCAAACACACTTTTCAAGCACTTTTCACAATAGCGCACTATaGCGCCCAGCACCCACACCA +
Preference number: 4 (lower is better)
Translates to: FLENYPIDEFQTHFSSTFHNSAL*RPAPTP
Trigger: TGGTGTGGGTGCTGGGCGTCATAGTGCGCTATTGTG...AAAAGTGCTTGAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTCTCCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp TTTTTGGAGAATTACCCTATCGATGAGTTCCAAACACACTTTTCAAGCACTTTTCCCATCAAGCCGCCATaGACCTGGCCAACCATAGCA +
Preference number: 4 (lower is better)
Translates to: FLENYPIDEFQTHFSSTFPIKPP*TWPTIA
Trigger: TGCTATGGTTGGCCAGGTTCATGGCGGCTTGATGGG...AAAAGTGCTTGAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTCTCCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp ACAAAAGCCAAAAAGGGCACCTGTAGGTTCTGCCTCTGGCATAAAGAGGTAGAGAATGCATCACCGAACTaGGGGTTATACTTAATTGCA +
Preference number: 4 (lower is better)
Translates to: TKAKKGTCRFCLWHKEVENASPN*GLYLIA
Trigger: TGCAATTAAGTATAACCCTCAGTTCGGTGATGCATT...CTCTACCTCTTTATGCCAGAGGCAGAACCTACAGGTGCCCTTTTTGGCTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp ACAAAAGCCAAAAAGGGCACCTGTAGGTTCTGCCTCTGGCATAAAGAGGTAGAGGAATTACCCTATCGATaGGTTCCAAACACACTTTTC +
Preference number: 4 (lower is better)
Translates to: TKAKKGTCRFCLWHKEVEELPYR*VPNTLF
Trigger: GAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTC...CTCTACCTCTTTATGCCAGAGGCAGAACCTACAGGTGCCCTTTTTGGCTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR GCA 90 bp TCAGTAAACCACCTTACAATCCATGGGGCTAATGTTACAACAACAACAAAAGCCGGCACCTGTAGGTTCTaGCTCTGGCATAAAGAGGTA +
Preference number: 4 (lower is better)
Translates to: SVNHLTIHGANVTTTTKAGTCRF*LWHKEV
Trigger: TACCTCTTTATGCCAGAGGCAGAACCTACAGGTGCC...GGCTTTTGTTGTTGTTGTAACATTAGCCCCATGGATTGTAAGGTGGTTTACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR GCA 90 bp ACAAAAGCCAAAAAGGGCACCTGTAGGTTCTGCCTCTGGCATAAAGAGGTAGAGATTGCTGTCAAACATTaGTTATGCTGTGTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: TKAKKGTCRFCLWHKEVEIAVKH*LCCVSW
Trigger: CCAACTCACACAGCATAAGCAATGTTTGACAGCAAT...CTCTACCTCTTTATGCCAGAGGCAGAACCTACAGGTGCCCTTTTTGGCTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp ACAAAAGCCAAAAAGGGCACCTGTAGGTTCTGCCTCTGGCATAAAGAGGTAGAGCTTCCAATCCCTTCTTaGAGAAATAAAACACGTCAG +
Preference number: 4 (lower is better)
Translates to: TKAKKGTCRFCLWHKEVELPIPS*RNKTRQ
Trigger: CTGACGTGTTTTATTTCTCCAAGAAGGGATTGGAAG...CTCTACCTCTTTATGCCAGAGGCAGAACCTACAGGTGCCCTTTTTGGCTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp TATATTGCTGTCAAACATTGCTTATGCTGTGTGAGTTGGGGAAAACTTATTTCCTTTGAGGCTGCTGTCTaGCAGCTGCCCAACCAGTGT +
Preference number: 4 (lower is better)
Translates to: YIAVKHCLCCVSWGKLISFEAAV*QLPNQC
Trigger: ACACTGGTTGGGCAGCTGCCAGACAGCAGCCTCAAA...GGAAATAAGTTTTCCCCAACTCACACAGCATAAGCAATGTTTGACAGCAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp TCAGTAAACCACCTTACAATCCATGGGGCTAATGTTACAACAACAACAAAAGCCTGGGGGAAGTATGGTTaGCAACACAAATGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: SVNHLTIHGANVTTTTKAWGKYG*QHKCLP
Trigger: AGGGAGGCATTTGTGTTGCCAACCATACTTCCCCCA...GGCTTTTGTTGTTGTTGTAACATTAGCCCCATGGATTGTAAGGTGGTTTACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp ACAGTTTCACATTCTGTACATGGTTACCAGAACAGATACAATACTCTCAGTAGTCTTCCTCTCTGGTCATaGGGGGCATGTACCACACGT +
Preference number: 4 (lower is better)
Translates to: TVSHSVHGYQNRYNTLSSLPLWS*GACTTR
Trigger: ACGTGTGGTACATGCCCCCCATGACCAGAGAGGAAG...ACTACTGAGAGTATTGTATCTGTTCTGGTAACCATGTACAGAATGTGAAACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp GTGGTCTACGAGCTGCCTACATATAAATGCGCACACACATTAACTTTGACTCACTGTAGGTTCTGCCTCTaGCATAAAGAGGTAGAGACA +
Preference number: 4 (lower is better)
Translates to: VVYELPTYKCAHTLTLTHCRFCL*HKEVET
Trigger: TGTCTCTACCTCTTTATGCCAGAGGCAGAACCTACA...GTGAGTCAAAGTTAATGTGTGTGCGCATTTATATGTAGGCAGCTCGTAGACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp ACAGTTTCACATTCTGTACATGGTTACCAGAACAGATACAATACTCTCAGTAGTCCGAAGGTAAAAGGATaGAGCCGAGAACCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: TVSHSVHGYQNRYNTLSSPKVKG*SREPAS
Trigger: TGACGCTGGTTCTCGGCTTCATCCTTTTACCTTCGG...ACTACTGAGAGTATTGTATCTGTTCTGGTAACCATGTACAGAATGTGAAACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp TCAGTAAACCACCTTACAATCCATGGGGCTAATGTTACAACAACAACAAAAGCCCGTTCAAACCAGACATaGGGACAAGCCTTGACCATA +
Preference number: 4 (lower is better)
Translates to: SVNHLTIHGANVTTTTKARSNQT*GQALTI
Trigger: TATGGTCAAGGCTTGTCCTCATGTCTGGTTTGAACG...GGCTTTTGTTGTTGTTGTAACATTAGCCCCATGGATTGTAAGGTGGTTTACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR GCA 90 bp TTTTTGGAGAATTACCCTATCGATGAGTTCCAAACACACTTTTCAAGCACTTTTCTGCTGTCTGGCAGCTaGCCAACCAGTGTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: FLENYPIDEFQTHFSSTFLLSGS*PTSVVP
Trigger: AGGAACTACACTGGTTGGGCAGCTGCCAGACAGCAG...AAAAGTGCTTGAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTCTCCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR GCA 90 bp TATATTGCTGTCAAACATTGCTTATGCTGTGTGAGTTGGGGAAAACTTATTTCCGGTTGGCAACACAAATaGCTCCCTTCTGGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: YIAVKHCLCCVSWGKLISGWQHK*LPSGVC
Trigger: ACAGACCCCAGAAGGGAGGCATTTGTGTTGCCAACC...GGAAATAAGTTTTCCCCAACTCACACAGCATAAGCAATGTTTGACAGCAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR GCA 90 bp ACAAAAGCCAAAAAGGGCACCTGTAGGTTCTGCCTCTGGCATAAAGAGGTAGAGAGGGTTATACTTAATTaGAACTGGATGTATGGTTCC +
Preference number: 4 (lower is better)
Translates to: TKAKKGTCRFCLWHKEVERVILN*NWMYGS
Trigger: GGAACCATACATCCAGTTGCAATTAAGTATAACCCT...CTCTACCTCTTTATGCCAGAGGCAGAACCTACAGGTGCCCTTTTTGGCTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR GCA 90 bp ACAAAAGCCAAAAAGGGCACCTGTAGGTTCTGCCTCTGGCATAAAGAGGTAGAGCTCTTTGTTACCAGTTaGTGGTTAAAATGTGGTCTA +
Preference number: 4 (lower is better)
Translates to: TKAKKGTCRFCLWHKEVELFVTS*WLKCGL
Trigger: TAGACCACATTTTAACCAGCAACTGGTAACAAAGAG...CTCTACCTCTTTATGCCAGAGGCAGAACCTACAGGTGCCCTTTTTGGCTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp ACAGTTTCACATTCTGTACATGGTTACCAGAACAGATACAATACTCTCAGTAGTGTGCCTGATTTCCTCTaGGTGGCGATTGCGACAACT +
Preference number: 4 (lower is better)
Translates to: TVSHSVHGYQNRYNTLSSVPDFL*VAIATT
Trigger: AGTTGTCGCAATCGCCACCCAGAGGAAATCAGGCAC...ACTACTGAGAGTATTGTATCTGTTCTGGTAACCATGTACAGAATGTGAAACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264409.5
CDS-3UTR CCA 90 bp ACAAAAGCCAAAAAGGGCACCTGTAGGTTCTGCCTCTGGCATAAAGAGGTAGAGCGCAGACTGATGTACTaGAAATTTACATTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: TKAKKGTCRFCLWHKEVERRLMY*KFTLVL
Trigger: AAGAACCAATGTAAATTTCCAGTACATCAGTCTGCG...CTCTACCTCTTTATGCCAGAGGCAGAACCTACAGGTGCCCTTTTTGGCTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp TTTTTGGAGAATTACCCTATCGATGAGTTCCAAACACACTTTTCAAGCACTTTTTTTGAGGCTGCTGTCTaGCAGCTGCCCAACCAGTGT +
Preference number: 4 (lower is better)
Translates to: FLENYPIDEFQTHFSSTFFEAAV*QLPNQC
Trigger: ACACTGGTTGGGCAGCTGCCAGACAGCAGCCTCAAA...AAAAGTGCTTGAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTCTCCAAAAA
43% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp TTTTTGGAGAATTACCCTATCGATGAGTTCCAAACACACTTTTCAAGCACTTTTCGGCAGCAAGTCAGATaGACCAGTTCACTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: FLENYPIDEFQTHFSSTFRQQVR*TSSLSQ
Trigger: CTGGCTGAGTGAACTGGTCCATCTGACTTGCTGCCG...AAAAGTGCTTGAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTCTCCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp GTGGTCTACGAGCTGCCTACATATAAATGCGCACACACATTAACTTTGACTCACTTGCTGGTTAAAATGTaGTCTACGAGCTGCCTACAT +
Preference number: 4 (lower is better)
Translates to: VVYELPTYKCAHTLTLTHLLVKM*STSCLH
Trigger: ATGTAGGCAGCTCGTAGACCACATTTTAACCAGCAA...GTGAGTCAAAGTTAATGTGTGTGCGCATTTATATGTAGGCAGCTCGTAGACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp ACAAAAGCCAAAAAGGGCACCTGTAGGTTCTGCCTCTGGCATAAAGAGGTAGAGTTTGTTACCAGTTGCTaGTTAAAATGTGGTCTACGA +
Preference number: 4 (lower is better)
Translates to: TKAKKGTCRFCLWHKEVEFVTSC*LKCGLR
Trigger: TCGTAGACCACATTTTAACCAGCAACTGGTAACAAA...CTCTACCTCTTTATGCCAGAGGCAGAACCTACAGGTGCCCTTTTTGGCTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp GTGGTCTACGAGCTGCCTACATATAAATGCGCACACACATTAACTTTGACTCACTTATGCTGTGTGAGTTaGGGAAAACTTATTTCCCCC +
Preference number: 4 (lower is better)
Translates to: VVYELPTYKCAHTLTLTHLCCVS*GKLISP
Trigger: GGGGGAAATAAGTTTTCCCCAACTCACACAGCATAA...GTGAGTCAAAGTTAATGTGTGTGCGCATTTATATGTAGGCAGCTCGTAGACCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp ACAGTTTCACATTCTGTACATGGTTACCAGAACAGATACAATACTCTCAGTAGTATCCGTCCTCTTAGCTaGGAGATCCATTGCCCACAA +
Preference number: 4 (lower is better)
Translates to: TVSHSVHGYQNRYNTLSSIRPLS*EIHCPQ
Trigger: TTGTGGGCAATGGATCTCTCAGCTAAGAGGACGGAT...ACTACTGAGAGTATTGTATCTGTTCTGGTAACCATGTACAGAATGTGAAACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp GTGGTCTACGAGCTGCCTACATATAAATGCGCACACACATTAACTTTGACTCACGAATTACCCTATCGATaGGTTCCAAACACACTTTTC +
Preference number: 4 (lower is better)
Translates to: VVYELPTYKCAHTLTLTHELPYR*VPNTLF
Trigger: GAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTC...GTGAGTCAAAGTTAATGTGTGTGCGCATTTATATGTAGGCAGCTCGTAGACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR GCA 90 bp ACAGTTTCACATTCTGTACATGGTTACCAGAACAGATACAATACTCTCAGTAGTTGTAGATCTCGGAGATaGCCAGAGACACTCCGAAGA +
Preference number: 4 (lower is better)
Translates to: TVSHSVHGYQNRYNTLSSCRSRR*PETLRR
Trigger: TCTTCGGAGTGTCTCTGGGCATCTCCGAGATCTACA...ACTACTGAGAGTATTGTATCTGTTCTGGTAACCATGTACAGAATGTGAAACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR GCA 90 bp TATATTGCTGTCAAACATTGCTTATGCTGTGTGAGTTGGGGAAAACTTATTTCCTGTAGATCTCGGAGATaGCCAGAGACACTCCGAAGA +
Preference number: 4 (lower is better)
Translates to: YIAVKHCLCCVSWGKLISCRSRR*PETLRR
Trigger: TCTTCGGAGTGTCTCTGGGCATCTCCGAGATCTACA...GGAAATAAGTTTTCCCCAACTCACACAGCATAAGCAATGTTTGACAGCAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR GCA 90 bp TTTTTGGAGAATTACCCTATCGATGAGTTCCAAACACACTTTTCAAGCACTTTTGGTTGGCAACACAAATaGCTCCCTTCTGGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: FLENYPIDEFQTHFSSTFGWQHK*LPSGVC
Trigger: ACAGACCCCAGAAGGGAGGCATTTGTGTTGCCAACC...AAAAGTGCTTGAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTCTCCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR GCA 90 bp GTGGTCTACGAGCTGCCTACATATAAATGCGCACACACATTAACTTTGACTCACTGCCCACAATCATCTTaGTGTAATTTTTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: VVYELPTYKCAHTLTLTHCPQSS*CNFSAA
Trigger: AGCAGCAGAAAAATTACAGCAAGATGATTGTGGGCA...GTGAGTCAAAGTTAATGTGTGTGCGCATTTATATGTAGGCAGCTCGTAGACCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR GCA 90 bp GTGGTCTACGAGCTGCCTACATATAAATGCGCACACACATTAACTTTGACTCACGTCAAACATTGCTTATaGTGTGTGAGTTGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: VVYELPTYKCAHTLTLTHVKHCL*CVSWGK
Trigger: TTTTCCCCAACTCACACAGCATAAGCAATGTTTGAC...GTGAGTCAAAGTTAATGTGTGTGCGCATTTATATGTAGGCAGCTCGTAGACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp GTGGTCTACGAGCTGCCTACATATAAATGCGCACACACATTAACTTTGACTCACAAGAATCGACTCCTTTaGGGTTCCTTTTTCAATTCG +
Preference number: 4 (lower is better)
Translates to: VVYELPTYKCAHTLTLTHKNRLL*GSFFNS
Trigger: CGAATTGAAAAAGGAACCCCAAAGGAGTCGATTCTT...GTGAGTCAAAGTTAATGTGTGTGCGCATTTATATGTAGGCAGCTCGTAGACCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp GTGGTCTACGAGCTGCCTACATATAAATGCGCACACACATTAACTTTGACTCACCTTCCAATCCCTTCTTaGAGAAATAAAACACGTCAG +
Preference number: 4 (lower is better)
Translates to: VVYELPTYKCAHTLTLTHLPIPS*RNKTRQ
Trigger: CTGACGTGTTTTATTTCTCCAAGAAGGGATTGGAAG...GTGAGTCAAAGTTAATGTGTGTGCGCATTTATATGTAGGCAGCTCGTAGACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp TCAGTAAACCACCTTACAATCCATGGGGCTAATGTTACAACAACAACAAAAGCCTGTAGGTTCTGCCTCTaGCATAAAGAGGTAGAGACA +
Preference number: 4 (lower is better)
Translates to: SVNHLTIHGANVTTTTKACRFCL*HKEVET
Trigger: TGTCTCTACCTCTTTATGCCAGAGGCAGAACCTACA...GGCTTTTGTTGTTGTTGTAACATTAGCCCCATGGATTGTAAGGTGGTTTACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp GTGGTCTACGAGCTGCCTACATATAAATGCGCACACACATTAACTTTGACTCACGAGTTTGGGCATTTTTaGAGAATTACCCTATCGATG +
Preference number: 4 (lower is better)
Translates to: VVYELPTYKCAHTLTLTHEFGHF*RITLSM
Trigger: CATCGATAGGGTAATTCTCCAAAAATGCCCAAACTC...GTGAGTCAAAGTTAATGTGTGTGCGCATTTATATGTAGGCAGCTCGTAGACCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp ACAAAAGCCAAAAAGGGCACCTGTAGGTTCTGCCTCTGGCATAAAGAGGTAGAGTTCACATTCTGTACATaGTTACCAGAACAGATACAA +
Preference number: 4 (lower is better)
Translates to: TKAKKGTCRFCLWHKEVEFTFCT*LPEQIQ
Trigger: TTGTATCTGTTCTGGTAACCATGTACAGAATGTGAA...CTCTACCTCTTTATGCCAGAGGCAGAACCTACAGGTGCCCTTTTTGGCTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp TCAGTAAACCACCTTACAATCCATGGGGCTAATGTTACAACAACAACAAAAGCCCCCTTTTTCCATGGGTaGCTCATCTCTTTGGATAAT +
Preference number: 4 (lower is better)
Translates to: SVNHLTIHGANVTTTTKAPFFHG*LISLDN
Trigger: ATTATCCAAAGAGATGAGTCACCCATGGAAAAAGGG...GGCTTTTGTTGTTGTTGTAACATTAGCCCCATGGATTGTAAGGTGGTTTACTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp TTTTTGGAGAATTACCCTATCGATGAGTTCCAAACACACTTTTCAAGCACTTTTATCCGTCCTCTTAGCTaGGAGATCCATTGCCCACAA +
Preference number: 4 (lower is better)
Translates to: FLENYPIDEFQTHFSSTFIRPLS*EIHCPQ
Trigger: TTGTGGGCAATGGATCTCTCAGCTAAGAGGACGGAT...AAAAGTGCTTGAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTCTCCAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp TCAGTAAACCACCTTACAATCCATGGGGCTAATGTTACAACAACAACAAAAGCCATTTACATTTCCTTTTaGCTTTCAGAGCAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SVNHLTIHGANVTTTTKAIYISF*LSEQVA
Trigger: GGCCACCTGCTCTGAAAGTCAAAAGGAAATGTAAAT...GGCTTTTGTTGTTGTTGTAACATTAGCCCCATGGATTGTAAGGTGGTTTACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR GCA 90 bp GTGGTCTACGAGCTGCCTACATATAAATGCGCACACACATTAACTTTGACTCACCTCTTTGTTACCAGTTaGTGGTTAAAATGTGGTCTA +
Preference number: 4 (lower is better)
Translates to: VVYELPTYKCAHTLTLTHLFVTS*WLKCGL
Trigger: TAGACCACATTTTAACCAGCAACTGGTAACAAAGAG...GTGAGTCAAAGTTAATGTGTGTGCGCATTTATATGTAGGCAGCTCGTAGACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp TATATTGCTGTCAAACATTGCTTATGCTGTGTGAGTTGGGGAAAACTTATTTCCCAAATGCCTCCCTTCTaGGGTCTGTACTGCTTGTTA +
Preference number: 4 (lower is better)
Translates to: YIAVKHCLCCVSWGKLISQMPPF*GLYCLL
Trigger: TAACAAGCAGTACAGACCCCAGAAGGGAGGCATTTG...GGAAATAAGTTTTCCCCAACTCACACAGCATAAGCAATGTTTGACAGCAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp TTTTTGGAGAATTACCCTATCGATGAGTTCCAAACACACTTTTCAAGCACTTTTTGGGGGAAGTATGGTTaGCAACACAAATGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: FLENYPIDEFQTHFSSTFWGKYG*QHKCLP
Trigger: AGGGAGGCATTTGTGTTGCCAACCATACTTCCCCCA...AAAAGTGCTTGAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTCTCCAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp GTGGTCTACGAGCTGCCTACATATAAATGCGCACACACATTAACTTTGACTCACAGATTAAAACATCAATaGGGGAAGTATGGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: VVYELPTYKCAHTLTLTHRLKHQ*GKYGWQ
Trigger: TTGCCAACCATACTTCCCCCATTGATGTTTTAATCT...GTGAGTCAAAGTTAATGTGTGTGCGCATTTATATGTAGGCAGCTCGTAGACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp TATATTGCTGTCAAACATTGCTTATGCTGTGTGAGTTGGGGAAAACTTATTTCCACCCTGTTAGCAAACTaGACTGCATCTTCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: YIAVKHCLCCVSWGKLISTLLAN*TASSPS
Trigger: GGAAGGAGAAGATGCAGTCCAGTTTGCTAACAGGGT...GGAAATAAGTTTTCCCCAACTCACACAGCATAAGCAATGTTTGACAGCAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp ACAGTTTCACATTCTGTACATGGTTACCAGAACAGATACAATACTCTCAGTAGTGACTTTCAGAGCAGGTaGCCACAAAGTTGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: TVSHSVHGYQNRYNTLSSDFQSR*PQSCPF
Trigger: AAAGGGACAACTTTGTGGCCACCTGCTCTGAAAGTC...ACTACTGAGAGTATTGTATCTGTTCTGGTAACCATGTACAGAATGTGAAACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp TCAGTAAACCACCTTACAATCCATGGGGCTAATGTTACAACAACAACAAAAGCCTTGCTGGTTAAAATGTaGTCTACGAGCTGCCTACAT +
Preference number: 4 (lower is better)
Translates to: SVNHLTIHGANVTTTTKALLVKM*STSCLH
Trigger: ATGTAGGCAGCTCGTAGACCACATTTTAACCAGCAA...GGCTTTTGTTGTTGTTGTAACATTAGCCCCATGGATTGTAAGGTGGTTTACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp TATATTGCTGTCAAACATTGCTTATGCTGTGTGAGTTGGGGAAAACTTATTTCCTTGACCATAGCTCTCTaGATAATTCCCATCAAGCCG +
Preference number: 4 (lower is better)
Translates to: YIAVKHCLCCVSWGKLISLTIAL*IIPIKP
Trigger: CGGCTTGATGGGAATTATTCAGAGAGCTATGGTCAA...GGAAATAAGTTTTCCCCAACTCACACAGCATAAGCAATGTTTGACAGCAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR GCA 90 bp TCAGTAAACCACCTTACAATCCATGGGGCTAATGTTACAACAACAACAAAAGCCGTCAAACATTGCTTATaGTGTGTGAGTTGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: SVNHLTIHGANVTTTTKAVKHCL*CVSWGK
Trigger: TTTTCCCCAACTCACACAGCATAAGCAATGTTTGAC...GGCTTTTGTTGTTGTTGTAACATTAGCCCCATGGATTGTAAGGTGGTTTACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR GCA 90 bp TCAGTAAACCACCTTACAATCCATGGGGCTAATGTTACAACAACAACAAAAGCCATTGCTGTCAAACATTaGTTATGCTGTGTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: SVNHLTIHGANVTTTTKAIAVKH*LCCVSW
Trigger: CCAACTCACACAGCATAAGCAATGTTTGACAGCAAT...GGCTTTTGTTGTTGTTGTAACATTAGCCCCATGGATTGTAAGGTGGTTTACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp TCAGTAAACCACCTTACAATCCATGGGGCTAATGTTACAACAACAACAAAAGCCAAGAATCGACTCCTTTaGGGTTCCTTTTTCAATTCG +
Preference number: 4 (lower is better)
Translates to: SVNHLTIHGANVTTTTKAKNRLL*GSFFNS
Trigger: CGAATTGAAAAAGGAACCCCAAAGGAGTCGATTCTT...GGCTTTTGTTGTTGTTGTAACATTAGCCCCATGGATTGTAAGGTGGTTTACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp TCAGTAAACCACCTTACAATCCATGGGGCTAATGTTACAACAACAACAAAAGCCGGTGACTCATCTCTTTaGATAATACCAACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: SVNHLTIHGANVTTTTKAGDSSL*IIPTEA
Trigger: TGCTTCTGTTGGTATTATCCAAAGAGATGAGTCACC...GGCTTTTGTTGTTGTTGTAACATTAGCCCCATGGATTGTAAGGTGGTTTACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp TTTTTGGAGAATTACCCTATCGATGAGTTCCAAACACACTTTTCAAGCACTTTTGACTTTCAGAGCAGGTaGCCACAAAGTTGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: FLENYPIDEFQTHFSSTFDFQSR*PQSCPF
Trigger: AAAGGGACAACTTTGTGGCCACCTGCTCTGAAAGTC...AAAAGTGCTTGAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTCTCCAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp GTGGTCTACGAGCTGCCTACATATAAATGCGCACACACATTAACTTTGACTCACTTCACATTCTGTACATaGTTACCAGAACAGATACAA +
Preference number: 4 (lower is better)
Translates to: VVYELPTYKCAHTLTLTHFTFCT*LPEQIQ
Trigger: TTGTATCTGTTCTGGTAACCATGTACAGAATGTGAA...GTGAGTCAAAGTTAATGTGTGTGCGCATTTATATGTAGGCAGCTCGTAGACCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp ACAGTTTCACATTCTGTACATGGTTACCAGAACAGATACAATACTCTCAGTAGTCCCTTTTTCCATGGGTaGCTCATCTCTTTGGATAAT +
Preference number: 4 (lower is better)
Translates to: TVSHSVHGYQNRYNTLSSPFFHG*LISLDN
Trigger: ATTATCCAAAGAGATGAGTCACCCATGGAAAAAGGG...ACTACTGAGAGTATTGTATCTGTTCTGGTAACCATGTACAGAATGTGAAACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp TCAGTAAACCACCTTACAATCCATGGGGCTAATGTTACAACAACAACAAAAGCCTCATTCAGTCCACAGTaGTGCCATCATTTTACAAAA +
Preference number: 4 (lower is better)
Translates to: SVNHLTIHGANVTTTTKASFSPQ*CHHFTK
Trigger: TTTTGTAAAATGATGGCATCACTGTGGACTGAATGA...GGCTTTTGTTGTTGTTGTAACATTAGCCCCATGGATTGTAAGGTGGTTTACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp TCAGTAAACCACCTTACAATCCATGGGGCTAATGTTACAACAACAACAAAAGCCAAGGCTCCTTCTATCTaGAAATGTGTTTGGTTACAA +
Preference number: 4 (lower is better)
Translates to: SVNHLTIHGANVTTTTKAKAPSI*KCVWLQ
Trigger: TTGTAACCAAACACATTTTCAGATAGAAGGAGCCTT...GGCTTTTGTTGTTGTTGTAACATTAGCCCCATGGATTGTAAGGTGGTTTACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR GCA 90 bp TCAGTAAACCACCTTACAATCCATGGGGCTAATGTTACAACAACAACAAAAGCCAGGGTTATACTTAATTaGAACTGGATGTATGGTTCC +
Preference number: 4 (lower is better)
Translates to: SVNHLTIHGANVTTTTKARVILN*NWMYGS
Trigger: GGAACCATACATCCAGTTGCAATTAAGTATAACCCT...GGCTTTTGTTGTTGTTGTAACATTAGCCCCATGGATTGTAAGGTGGTTTACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR GCA 90 bp TATATTGCTGTCAAACATTGCTTATGCTGTGTGAGTTGGGGAAAACTTATTTCCACTACTGTTCCAAAATaGATCACCGAACTGAGGGTT +
Preference number: 4 (lower is better)
Translates to: YIAVKHCLCCVSWGKLISTTVPK*ITELRV
Trigger: AACCCTCAGTTCGGTGATGCATTTTGGAACAGTAGT...GGAAATAAGTTTTCCCCAACTCACACAGCATAAGCAATGTTTGACAGCAATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR GCA 90 bp TCAGTAAACCACCTTACAATCCATGGGGCTAATGTTACAACAACAACAAAAGCCCTGCCTACATATAAATaGGCACACACATTAACTTTG +
Preference number: 4 (lower is better)
Translates to: SVNHLTIHGANVTTTTKALPTYK*AHTLTL
Trigger: CAAAGTTAATGTGTGTGCGCATTTATATGTAGGCAG...GGCTTTTGTTGTTGTTGTAACATTAGCCCCATGGATTGTAAGGTGGTTTACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp TATATTGCTGTCAAACATTGCTTATGCTGTGTGAGTTGGGGAAAACTTATTTCCCTTCATCTTCTACAATaGCTTCCAATCCCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: YIAVKHCLCCVSWGKLISLHLLQ*LPIPSW
Trigger: CCAAGAAGGGATTGGAAGCCATTGTAGAAGATGAAG...GGAAATAAGTTTTCCCCAACTCACACAGCATAAGCAATGTTTGACAGCAATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp ACAGTTTCACATTCTGTACATGGTTACCAGAACAGATACAATACTCTCAGTAGTCTTCATCTTCTACAATaGCTTCCAATCCCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: TVSHSVHGYQNRYNTLSSLHLLQ*LPIPSW
Trigger: CCAAGAAGGGATTGGAAGCCATTGTAGAAGATGAAG...ACTACTGAGAGTATTGTATCTGTTCTGGTAACCATGTACAGAATGTGAAACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp ACAGTTTCACATTCTGTACATGGTTACCAGAACAGATACAATACTCTCAGTAGTTCTGAGGAAAACCTCTaGGTCACTTCATCTTCTACA +
Preference number: 4 (lower is better)
Translates to: TVSHSVHGYQNRYNTLSSSEENL*VTSSST
Trigger: TGTAGAAGATGAAGTGACCCAGAGGTTTTCCTCAGA...ACTACTGAGAGTATTGTATCTGTTCTGGTAACCATGTACAGAATGTGAAACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp TCAGTAAACCACCTTACAATCCATGGGGCTAATGTTACAACAACAACAAAAGCCTTTGTTACCAGTTGCTaGTTAAAATGTGGTCTACGA +
Preference number: 4 (lower is better)
Translates to: SVNHLTIHGANVTTTTKAFVTSC*LKCGLR
Trigger: TCGTAGACCACATTTTAACCAGCAACTGGTAACAAA...GGCTTTTGTTGTTGTTGTAACATTAGCCCCATGGATTGTAAGGTGGTTTACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp ACAGTTTCACATTCTGTACATGGTTACCAGAACAGATACAATACTCTCAGTAGTTTATGCTGTGTGAGTTaGGGAAAACTTATTTCCCCC +
Preference number: 4 (lower is better)
Translates to: TVSHSVHGYQNRYNTLSSLCCVS*GKLISP
Trigger: GGGGGAAATAAGTTTTCCCCAACTCACACAGCATAA...ACTACTGAGAGTATTGTATCTGTTCTGGTAACCATGTACAGAATGTGAAACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp ACAGTTTCACATTCTGTACATGGTTACCAGAACAGATACAATACTCTCAGTAGTTTACATTGGTTCTTGTaGGGAGATTCCATGACACTA +
Preference number: 4 (lower is better)
Translates to: TVSHSVHGYQNRYNTLSSLHWFL*GDSMTL
Trigger: TAGTGTCATGGAATCTCCTCACAAGAACCAATGTAA...ACTACTGAGAGTATTGTATCTGTTCTGGTAACCATGTACAGAATGTGAAACTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp TATATTGCTGTCAAACATTGCTTATGCTGTGTGAGTTGGGGAAAACTTATTTCCAATGCATCACCGAACTaGGGGTTATACTTAATTGCA +
Preference number: 4 (lower is better)
Translates to: YIAVKHCLCCVSWGKLISNASPN*GLYLIA
Trigger: TGCAATTAAGTATAACCCTCAGTTCGGTGATGCATT...GGAAATAAGTTTTCCCCAACTCACACAGCATAAGCAATGTTTGACAGCAATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp ACAGTTTCACATTCTGTACATGGTTACCAGAACAGATACAATACTCTCAGTAGTAATGCATCACCGAACTaGGGGTTATACTTAATTGCA +
Preference number: 4 (lower is better)
Translates to: TVSHSVHGYQNRYNTLSSNASPN*GLYLIA
Trigger: TGCAATTAAGTATAACCCTCAGTTCGGTGATGCATT...ACTACTGAGAGTATTGTATCTGTTCTGGTAACCATGTACAGAATGTGAAACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp TTTTTGGAGAATTACCCTATCGATGAGTTCCAAACACACTTTTCAAGCACTTTTATTTACATTTCCTTTTaGCTTTCAGAGCAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: FLENYPIDEFQTHFSSTFIYISF*LSEQVA
Trigger: GGCCACCTGCTCTGAAAGTCAAAAGGAAATGTAAAT...AAAAGTGCTTGAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTCTCCAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR GCA 90 bp TATATTGCTGTCAAACATTGCTTATGCTGTGTGAGTTGGGGAAAACTTATTTCCTGCCCACAATCATCTTaGTGTAATTTTTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: YIAVKHCLCCVSWGKLISCPQSS*CNFSAA
Trigger: AGCAGCAGAAAAATTACAGCAAGATGATTGTGGGCA...GGAAATAAGTTTTCCCCAACTCACACAGCATAAGCAATGTTTGACAGCAATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp ACAGTTTCACATTCTGTACATGGTTACCAGAACAGATACAATACTCTCAGTAGTAAGAATCGACTCCTTTaGGGTTCCTTTTTCAATTCG +
Preference number: 4 (lower is better)
Translates to: TVSHSVHGYQNRYNTLSSKNRLL*GSFFNS
Trigger: CGAATTGAAAAAGGAACCCCAAAGGAGTCGATTCTT...ACTACTGAGAGTATTGTATCTGTTCTGGTAACCATGTACAGAATGTGAAACTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp TATATTGCTGTCAAACATTGCTTATGCTGTGTGAGTTGGGGAAAACTTATTTCCCTTCCAATCCCTTCTTaGAGAAATAAAACACGTCAG +
Preference number: 4 (lower is better)
Translates to: YIAVKHCLCCVSWGKLISLPIPS*RNKTRQ
Trigger: CTGACGTGTTTTATTTCTCCAAGAAGGGATTGGAAG...GGAAATAAGTTTTCCCCAACTCACACAGCATAAGCAATGTTTGACAGCAATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp TTTTTGGAGAATTACCCTATCGATGAGTTCCAAACACACTTTTCAAGCACTTTTTCTGAGGAAAACCTCTaGGTCACTTCATCTTCTACA +
Preference number: 4 (lower is better)
Translates to: FLENYPIDEFQTHFSSTFSEENL*VTSSST
Trigger: TGTAGAAGATGAAGTGACCCAGAGGTTTTCCTCAGA...AAAAGTGCTTGAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTCTCCAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp TCAGTAAACCACCTTACAATCCATGGGGCTAATGTTACAACAACAACAAAAGCCATACTTAATTGCAACTaGATGTATGGTTCCTCCAAT +
Preference number: 4 (lower is better)
Translates to: SVNHLTIHGANVTTTTKAILNCN*MYGSSN
Trigger: ATTGGAGGAACCATACATCCAGTTGCAATTAAGTAT...GGCTTTTGTTGTTGTTGTAACATTAGCCCCATGGATTGTAAGGTGGTTTACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp TATATTGCTGTCAAACATTGCTTATGCTGTGTGAGTTGGGGAAAACTTATTTCCTCATTCAGTCCACAGTaGTGCCATCATTTTACAAAA +
Preference number: 4 (lower is better)
Translates to: YIAVKHCLCCVSWGKLISSFSPQ*CHHFTK
Trigger: TTTTGTAAAATGATGGCATCACTGTGGACTGAATGA...GGAAATAAGTTTTCCCCAACTCACACAGCATAAGCAATGTTTGACAGCAATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp TTTTTGGAGAATTACCCTATCGATGAGTTCCAAACACACTTTTCAAGCACTTTTGAATTACCCTATCGATaGGTTCCAAACACACTTTTC +
Preference number: 4 (lower is better)
Translates to: FLENYPIDEFQTHFSSTFELPYR*VPNTLF
Trigger: GAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTC...AAAAGTGCTTGAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTCTCCAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR TCA 90 bp ACAGTTTCACATTCTGTACATGGTTACCAGAACAGATACAATACTCTCAGTAGTAAGGCTCCTTCTATCTaGAAATGTGTTTGGTTACAA +
Preference number: 4 (lower is better)
Translates to: TVSHSVHGYQNRYNTLSSKAPSI*KCVWLQ
Trigger: TTGTAACCAAACACATTTTCAGATAGAAGGAGCCTT...ACTACTGAGAGTATTGTATCTGTTCTGGTAACCATGTACAGAATGTGAAACTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR GCA 90 bp TATATTGCTGTCAAACATTGCTTATGCTGTGTGAGTTGGGGAAAACTTATTTCCCTGCCTACATATAAATaGGCACACACATTAACTTTG +
Preference number: 4 (lower is better)
Translates to: YIAVKHCLCCVSWGKLISLPTYK*AHTLTL
Trigger: CAAAGTTAATGTGTGTGCGCATTTATATGTAGGCAG...GGAAATAAGTTTTCCCCAACTCACACAGCATAAGCAATGTTTGACAGCAATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR GCA 90 bp TTTTTGGAGAATTACCCTATCGATGAGTTCCAAACACACTTTTCAAGCACTTTTGTCAAACATTGCTTATaGTGTGTGAGTTGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: FLENYPIDEFQTHFSSTFVKHCL*CVSWGK
Trigger: TTTTCCCCAACTCACACAGCATAAGCAATGTTTGAC...AAAAGTGCTTGAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTCTCCAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp TTTTTGGAGAATTACCCTATCGATGAGTTCCAAACACACTTTTCAAGCACTTTTGGTGACTCATCTCTTTaGATAATACCAACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: FLENYPIDEFQTHFSSTFGDSSL*IIPTEA
Trigger: TGCTTCTGTTGGTATTATCCAAAGAGATGAGTCACC...AAAAGTGCTTGAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTCTCCAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp TATATTGCTGTCAAACATTGCTTATGCTGTGTGAGTTGGGGAAAACTTATTTCCAGATTAAAACATCAATaGGGGAAGTATGGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: YIAVKHCLCCVSWGKLISRLKHQ*GKYGWQ
Trigger: TTGCCAACCATACTTCCCCCATTGATGTTTTAATCT...GGAAATAAGTTTTCCCCAACTCACACAGCATAAGCAATGTTTGACAGCAATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp TTTTTGGAGAATTACCCTATCGATGAGTTCCAAACACACTTTTCAAGCACTTTTGAGTTTGGGCATTTTTaGAGAATTACCCTATCGATG +
Preference number: 4 (lower is better)
Translates to: FLENYPIDEFQTHFSSTFEFGHF*RITLSM
Trigger: CATCGATAGGGTAATTCTCCAAAAATGCCCAAACTC...AAAAGTGCTTGAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTCTCCAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR GCA 90 bp TTTTTGGAGAATTACCCTATCGATGAGTTCCAAACACACTTTTCAAGCACTTTTAGGGTTATACTTAATTaGAACTGGATGTATGGTTCC +
Preference number: 4 (lower is better)
Translates to: FLENYPIDEFQTHFSSTFRVILN*NWMYGS
Trigger: GGAACCATACATCCAGTTGCAATTAAGTATAACCCT...AAAAGTGCTTGAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTCTCCAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR GCA 90 bp TTTTTGGAGAATTACCCTATCGATGAGTTCCAAACACACTTTTCAAGCACTTTTCTCTTTGTTACCAGTTaGTGGTTAAAATGTGGTCTA +
Preference number: 4 (lower is better)
Translates to: FLENYPIDEFQTHFSSTFLFVTS*WLKCGL
Trigger: TAGACCACATTTTAACCAGCAACTGGTAACAAAGAG...AAAAGTGCTTGAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTCTCCAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp ACAGTTTCACATTCTGTACATGGTTACCAGAACAGATACAATACTCTCAGTAGTTTTCAATTCGTATTGTaGCCCACTCTAAAGTTTTCA +
Preference number: 4 (lower is better)
Translates to: TVSHSVHGYQNRYNTLSSFQFVL*PTLKFS
Trigger: TGAAAACTTTAGAGTGGGCCACAATACGAATTGAAA...ACTACTGAGAGTATTGTATCTGTTCTGGTAACCATGTACAGAATGTGAAACTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp TATATTGCTGTCAAACATTGCTTATGCTGTGTGAGTTGGGGAAAACTTATTTCCTTTCAATTCGTATTGTaGCCCACTCTAAAGTTTTCA +
Preference number: 4 (lower is better)
Translates to: YIAVKHCLCCVSWGKLISFQFVL*PTLKFS
Trigger: TGAAAACTTTAGAGTGGGCCACAATACGAATTGAAA...GGAAATAAGTTTTCCCCAACTCACACAGCATAAGCAATGTTTGACAGCAATATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp TTTTTGGAGAATTACCCTATCGATGAGTTCCAAACACACTTTTCAAGCACTTTTCGCAGACTGATGTACTaGAAATTTACATTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: FLENYPIDEFQTHFSSTFRRLMY*KFTLVL
Trigger: AAGAACCAATGTAAATTTCCAGTACATCAGTCTGCG...AAAAGTGCTTGAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTCTCCAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp TTTTTGGAGAATTACCCTATCGATGAGTTCCAAACACACTTTTCAAGCACTTTTAGATTAAAACATCAATaGGGGAAGTATGGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: FLENYPIDEFQTHFSSTFRLKHQ*GKYGWQ
Trigger: TTGCCAACCATACTTCCCCCATTGATGTTTTAATCT...AAAAGTGCTTGAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTCTCCAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp TATATTGCTGTCAAACATTGCTTATGCTGTGTGAGTTGGGGAAAACTTATTTCCATACTTAATTGCAACTaGATGTATGGTTCCTCCAAT +
Preference number: 4 (lower is better)
Translates to: YIAVKHCLCCVSWGKLISILNCN*MYGSSN
Trigger: ATTGGAGGAACCATACATCCAGTTGCAATTAAGTAT...GGAAATAAGTTTTCCCCAACTCACACAGCATAAGCAATGTTTGACAGCAATATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp TTTTTGGAGAATTACCCTATCGATGAGTTCCAAACACACTTTTCAAGCACTTTTTTTCAATTCGTATTGTaGCCCACTCTAAAGTTTTCA +
Preference number: 4 (lower is better)
Translates to: FLENYPIDEFQTHFSSTFFQFVL*PTLKFS
Trigger: TGAAAACTTTAGAGTGGGCCACAATACGAATTGAAA...AAAAGTGCTTGAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTCTCCAAAAA
34% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CCA 90 bp TTTTTGGAGAATTACCCTATCGATGAGTTCCAAACACACTTTTCAAGCACTTTTATACTTAATTGCAACTaGATGTATGGTTCCTCCAAT +
Preference number: 4 (lower is better)
Translates to: FLENYPIDEFQTHFSSTFILNCN*MYGSSN
Trigger: ATTGGAGGAACCATACATCCAGTTGCAATTAAGTAT...AAAAGTGCTTGAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTCTCCAAAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS GCA 90 bp GCCGGCGGAGCTGGCACCGGGCCGCGGGCTGTGCTGGAAGCTGGCTaGGCTCGGGCGCCCAGCGCCCTATTTCTGCGCGCTGCCCTCGCC +
Preference number: 5 (lower is better)
Translates to: AGGAGTGPRAVLEAG*ARAPSALFLRAALA
Trigger: GGCGAGGGCAGCGCGCAGAAATAGGGCGCTGGGCGCCCGAGCGCAGCCAGCTTCCAGCACAGCCCGCGGCCCGGTGCCAGCTCCGCCGGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506766.5
CDS CCA 90 bp CGGAGGCCCTCCCCGAGCCAGGTTCCCTGCGGGAGCACCGCACTTTaGCACACCGGTCGCCGGCGGAGCTGGCACCGGGCCGCGGGCTGT +
Preference number: 5 (lower is better)
Translates to: RRPSPSQVPCGSTAL*HTGRRRSWHRAAGC
Trigger: ACAGCCCGCGGCCCGGTGCCAGCTCCGCCGGCGACCGGTGTGCCAAAGTGCGGTGCTCCCGCAGGGAACCTGGCTCGGGGAGGGCCTCCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264409.5
CDS CCA 90 bp GGTCGCCGGCGGAGCTGGCACCGGGCCGCGGGCTGTGCTGGAAGCTaGCTGCGCTCGGGCGCCCAGCGCCCTATTTCTGCGCGCTGCCCT +
Preference number: 5 (lower is better)
Translates to: GRRRSWHRAAGCAGS*LRSGAQRPISARCP
Trigger: AGGGCAGCGCGCAGAAATAGGGCGCTGGGCGCCCGAGCGCAGCCAGCTTCCAGCACAGCCCGCGGCCCGGTGCCAGCTCCGCCGGCGACC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506766.5
CDS CCA 90 bp CCCTGCGGGAGCACCGCACTTTGGCACACCGGTCGCCGGCGGAGCTaGCACCGGGCCGCGGGCTGTGCTGGAAGCTGGCTGCGCTCGGGC +
Preference number: 5 (lower is better)
Translates to: PCGSTALWHTGRRRS*HRAAGCAGSWLRSG
Trigger: GCCCGAGCGCAGCCAGCTTCCAGCACAGCCCGCGGCCCGGTGCCAGCTCCGCCGGCGACCGGTGTGCCAAAGTGCGGTGCTCCCGCAGGG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506766.5
CDS CCA 90 bp TGGAGGCCCTCCCCGAGCCAGGTTCCCTGCGGGAGCACCGCACTTTaGCACACCGGTCGCCGGCGGAGCTGGCACCGGGCCGCGGGCTGT +
Preference number: 5 (lower is better)
Translates to: WRPSPSQVPCGSTAL*HTGRRRSWHRAAGC
Trigger: ACAGCCCGCGGCCCGGTGCCAGCTCCGCCGGCGACCGGTGTGCCAAAGTGCGGTGCTCCCGCAGGGAACCTGGCTCGGGGAGGGCCTCCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395226.6
ENST00000506766.5
CDS GCA 90 bp CCGAGCCCGGCACTCACCTGGAGGCCCTCCCCGAGCCAGGTTCCCTaGGGGAGCACCGCACTTTGGCACACCGGTCGCCGGCGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: PSPALTWRPSPSQVP*GSTALWHTGRRRSW
Trigger: CCAGCTCCGCCGGCGACCGGTGTGCCAAAGTGCGGTGCTCCCGCAGGGAACCTGGCTCGGGGAGGGCCTCCAGGTGAGTGCCGGGCTCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395226.6
ENST00000506766.5
CDS CCA 90 bp GCTGAAGCCACCGCGGCGTGCGGAGACCTGGGTAGCGCGAGCCAGTaGTCGGAGCTGCGGGTAAGCGGAGGCACACCGCGGCGCGGGCAG +
Preference number: 5 (lower is better)
Translates to: AEATAACGDLGSASQ*SELRVSGGTPRRGQ
Trigger: CTGCCCGCGCCGCGGTGTGCCTCCGCTTACCCGCAGCTCCGACCACTGGCTCGCGCTACCCAGGTCTCCGCACGCCGCGGTGGCTTCAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264409.5
CDS GCA 90 bp CTGTGCTGGAAGCTGGCTGCGCTCGGGCGCCCAGCGCCCTATTTCTaGGCGCTGCCCTCGCCCCACCTCCTCCGTCACCCAACGGGGGAG +
Preference number: 5 (lower is better)
Translates to: LCWKLAALGRPAPYF*ALPSPHLLRHPTGE
Trigger: CTCCCCCGTTGGGTGACGGAGGAGGTGGGGCGAGGGCAGCGCGCAGAAATAGGGCGCTGGGCGCCCGAGCGCAGCCAGCTTCCAGCACAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506766.5
CDS CCA 90 bp TGCGCCCTCCATGACTCGGCGCACCCACTCAGGAGAGGTCCGCAGTaGAGGGCCGAGCGCCACAGCAGTCCCTGTCCCCAGGCAGTCCCG +
Preference number: 5 (lower is better)
Translates to: CALHDSAHPLRRGPQ*RAERHSSPCPQAVP
Trigger: CGGGACTGCCTGGGGACAGGGACTGCTGTGGCGCTCGGCCCTCCACTGCGGACCTCTCCTGAGTGGGTGCGCCGAGTCATGGAGGGCGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000506766.5
ENST00000509412.1
ENST00000514309.5
ENST00000611707.4
CDS CCA 90 bp GCTGCCCTCGCCCCACCTCCTCCGTCACCCAACGGGGGAGCTCCCTaGCAGTACTTAGCCCAGGAGTGCCGCAGCCTCCTGGGCGGTCTC +
Preference number: 5 (lower is better)
Translates to: AALAPPPPSPNGGAP*QYLAQECRSLLGGL
Trigger: GAGACCGCCCAGGAGGCTGCGGCACTCCTGGGCTAAGTACTGCCAGGGAGCTCCCCCGTTGGGTGACGGAGGAGGTGGGGCGAGGGCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506766.5
CDS GCA 90 bp AACTCAGCAGATGACTCACGGAGGCCCTCCCCGAGCCAGGTTCCCTaGGGGAGCACCGCACTTTGGCACACCGGTCGCCGGCGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: NSADDSRRPSPSQVP*GSTALWHTGRRRSW
Trigger: CCAGCTCCGCCGGCGACCGGTGTGCCAAAGTGCGGTGCTCCCGCAGGGAACCTGGCTCGGGGAGGGCCTCCGTGAGTCATCTGCTGAGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264409.5
CDS CCA 90 bp CCTCGCCCCTGCCAGTTAACTCTTTCTCCGCTGGCTGCCCAGGTCTaGGCTGAAGCCACCGCGGCGTGCGGAGACCTGGGTAGCGCGAGC +
Preference number: 5 (lower is better)
Translates to: PRPCQLTLSPLAAQV*AEATAACGDLGSAS
Trigger: GCTCGCGCTACCCAGGTCTCCGCACGCCGCGGTGGCTTCAGCCCAGACCTGGGCAGCCAGCGGAGAAAGAGTTAACTGGCAGGGGCGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264409.5
CDS TCA 90 bp GGCAGAGCGCGCGAGCGCAGCCAGGAACCCGCCCCGCCCGGTGCCTaGTTTCCTCTGGGTGGCGATTGCGACAACTCAGCAGATGACTCA +
Preference number: 5 (lower is better)
Translates to: GRARERSQEPAPPGA*FPLGGDCDNSADDS
Trigger: TGAGTCATCTGCTGAGTTGTCGCAATCGCCACCCAGAGGAAATCAGGCACCGGGCGGGGCGGGTTCCTGGCTGCGCTCGCGCGCTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264409.5
CDS TCA 90 bp TCAGCCAGGTGGAAAGGATCTTCCCGGCCAGCTCTGCGCCCTCCATaGCTCGGCGCACCCACTCAGGAGAGGTCCGCAGTGGAGGGCCGA +
Preference number: 5 (lower is better)
Translates to: SARWKGSSRPALRPP*LGAPTQERSAVEGR
Trigger: TCGGCCCTCCACTGCGGACCTCTCCTGAGTGGGTGCGCCGAGTCATGGAGGGCGCAGAGCTGGCCGGGAAGATCCTTTCCACCTGGCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000506766.5
ENST00000509412.1
ENST00000514309.5
ENST00000611707.4
CDS CCA 90 bp GCGAGCGCAGCCAGGAACCCGCCCCGCCCGGTGCCTGATTTCCTCTaGGTGGCGATTGCGACAACTCAGCAGATGACTCACGGAGGCCCT +
Preference number: 5 (lower is better)
Translates to: ASAARNPPRPVPDFL*VAIATTQQMTHGGP
Trigger: AGGGCCTCCGTGAGTCATCTGCTGAGTTGTCGCAATCGCCACCCAGAGGAAATCAGGCACCGGGCGGGGCGGGTTCCTGGCTGCGCTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264409.5
CDS GCA 90 bp GAGAACCAGCGTCAGCCAGGTGGAAAGGATCTTCCCGGCCAGCTCTaGGCCCTCCATGACTCGGCGCACCCACTCAGGAGAGGTCCGCAG +
Preference number: 5 (lower is better)
Translates to: ENQRQPGGKDLPGQL*ALHDSAHPLRRGPQ
Trigger: CTGCGGACCTCTCCTGAGTGGGTGCGCCGAGTCATGGAGGGCGCAGAGCTGGCCGGGAAGATCCTTTCCACCTGGCTGACGCTGGTTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000506766.5
ENST00000509412.1
ENST00000514309.5
ENST00000611707.4
CDS TCA 90 bp CGGTGCCTGATTTCCTCTGGGTGGCGATTGCGACAACTCAGCAGATaGCTCACGGAGGCCCTCCCCGAGCCAGGTTCCCTGCGGGAGCAC +
Preference number: 5 (lower is better)
Translates to: RCLISSGWRLRQLSR*LTEALPEPGSLREH
Trigger: GTGCTCCCGCAGGGAACCTGGCTCGGGGAGGGCCTCCGTGAGTCATCTGCTGAGTTGTCGCAATCGCCACCCAGAGGAAATCAGGCACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264409.5
CDS-3UTR CAA 90 bp AAGGGGTGGAGGGTGAGGGGTAGCTCCACACACTCTCATTCATTCATACTGAAGCGGGAGCACCGCACTTaGGCACACCGGTCGCCGGCG +
Preference number: 5 (lower is better)
Translates to: KGWRVRGSSTHSHSFILKREHRT*AHRSPA
Trigger: CGCCGGCGACCGGTGTGCCAAAGTGCGGTGCTCCCG...CTTCAGTATGAATGAATGAGAGTGTGTGGAGCTACCCCTCACCCTCCACCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264409.5
ENST00000395226.6
CDS TCA 90 bp TCTCGGAGATGCCCAGAGACACTCCGAAGACCGAAGGTAAAAGGATaGAGCCGAGAACCAGCGTCAGCCAGGTGGAAAGGATCTTCCCGG +
Preference number: 5 (lower is better)
Translates to: SRRCPETLRRPKVKG*SREPASARWKGSSR
Trigger: CCGGGAAGATCCTTTCCACCTGGCTGACGCTGGTTCTCGGCTTCATCCTTTTACCTTCGGTCTTCGGAGTGTCTCTGGGCATCTCCGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000506766.5
ENST00000509412.1
ENST00000514309.5
ENST00000611707.4
CDS CCA 90 bp ATGGTACCAGAGAGGGCTCGCACACAGATCCGGCAGCAAGTCAGATaGACCAGTTCACTCAGCCAGTTTTTGAGGCTGCTGTCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: MVPERARTQIRQQVR*TSSLSQFLRLLSGS
Trigger: GCTGCCAGACAGCAGCCTCAAAAACTGGCTGAGTGAACTGGTCCATCTGACTTGCTGCCGGATCTGTGTGCGAGCCCTCTCTGGTACCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CAA 90 bp TATATTGCTGTCAAACATTGCTTATGCTGTGTGAGTTGGGGAAAACTTATTTCCCGGGAGCACCGCACTTaGGCACACCGGTCGCCGGCG +
Preference number: 5 (lower is better)
Translates to: YIAVKHCLCCVSWGKLISREHRT*AHRSPA
Trigger: CGCCGGCGACCGGTGTGCCAAAGTGCGGTGCTCCCG...GGAAATAAGTTTTCCCCAACTCACACAGCATAAGCAATGTTTGACAGCAATATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264409.5
ENST00000395226.6
CDS-3UTR CAA 90 bp AAGGGGTGGAGGGTGAGGGGTAGCTCCACACACTCTCATTCATTCATACTGAAGATGGGGGAAGTATGGTaGGCAACACAAATGCCTCCC +
Preference number: 5 (lower is better)
Translates to: KGWRVRGSSTHSHSFILKMGEVW*ATQMPP
Trigger: GGGAGGCATTTGTGTTGCCAACCATACTTCCCCCAT...CTTCAGTATGAATGAATGAGAGTGTGTGGAGCTACCCCTCACCCTCCACCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CAA 90 bp ACAAAAGCCAAAAAGGGCACCTGTAGGTTCTGCCTCTGGCATAAAGAGGTAGAGTCACTCAGCCAGTTTTaGAGGCTGCTGTCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: TKAKKGTCRFCLWHKEVESLSQF*RLLSGS
Trigger: GCTGCCAGACAGCAGCCTCAAAAACTGGCTGAGTGA...CTCTACCTCTTTATGCCAGAGGCAGAACCTACAGGTGCCCTTTTTGGCTTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CAA 90 bp ACAAAAGCCAAAAAGGGCACCTGTAGGTTCTGCCTCTGGCATAAAGAGGTAGAGATGGGGGAAGTATGGTaGGCAACACAAATGCCTCCC +
Preference number: 5 (lower is better)
Translates to: TKAKKGTCRFCLWHKEVEMGEVW*ATQMPP
Trigger: GGGAGGCATTTGTGTTGCCAACCATACTTCCCCCAT...CTCTACCTCTTTATGCCAGAGGCAGAACCTACAGGTGCCCTTTTTGGCTTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS GCA 90 bp ATCCAACAGCAAACAGGGCTCTGTTTCAGTTTTGAGACTCAGTGCTaGTCGGCCCTCTTTGGTAGCAAGGCCAAGATTGGTCAGCTTTTA +
Preference number: 5 (lower is better)
Translates to: IQQQTGLCFSFETQC*SALFGSKAKIGQLL
Trigger: TAAAAGCTGACCAATCTTGGCCTTGCTACCAAAGAGGGCCGAGCAGCACTGAGTCTCAAAACTGAAACAGAGCCCTGTTTGCTGTTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513683.1
CDS CCA 90 bp ATGACGCCCAGCACCCACACCATAGTGAGCCGCAGACTGATGTACTaGAAATTTACATTGGTTCTTGTGAGGAGATTCCATGACACTAGC +
Preference number: 5 (lower is better)
Translates to: MTPSTHTIVSRRLMY*KFTLVLVRRFHDTS
Trigger: GCTAGTGTCATGGAATCTCCTCACAAGAACCAATGTAAATTTCCAGTACATCAGTCTGCGGCTCACTATGGTGTGGGTGCTGGGCGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CAA 90 bp AAGGGGTGGAGGGTGAGGGGTAGCTCCACACACTCTCATTCATTCATACTGAAGCTTATGCTGTGTGAGTaGGGGAAAACTTATTTCCCC +
Preference number: 5 (lower is better)
Translates to: KGWRVRGSSTHSHSFILKLMLCE*GKTYFP
Trigger: GGGGAAATAAGTTTTCCCCAACTCACACAGCATAAG...CTTCAGTATGAATGAATGAGAGTGTGTGGAGCTACCCCTCACCCTCCACCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS CCA 90 bp CTTGTGAGGAGATTCCATGACACTAGCTCCTCTGAGGAAAACCTCTaGGTCACTTCATCTTCTACAATGGCTTCCAATCCCTTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: LVRRFHDTSSSEENL*VTSSSTMASNPFLE
Trigger: CTCCAAGAAGGGATTGGAAGCCATTGTAGAAGATGAAGTGACCCAGAGGTTTTCCTCAGAGGAGCTAGTGTCATGGAATCTCCTCACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CAA 90 bp AAGGGGTGGAGGGTGAGGGGTAGCTCCACACACTCTCATTCATTCATACTGAAGGCACACACATTAACTTaGACTCACTTTTCTTTGGCG +
Preference number: 5 (lower is better)
Translates to: KGWRVRGSSTHSHSFILKAHTLT*THFSLA
Trigger: CGCCAAAGAAAAGTGAGTCAAAGTTAATGTGTGTGC...CTTCAGTATGAATGAATGAGAGTGTGTGGAGCTACCCCTCACCCTCCACCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CAA 90 bp ACAAAAGCCAAAAAGGGCACCTGTAGGTTCTGCCTCTGGCATAAAGAGGTAGAGGCTCTTTGTTACCAGTaGCTGGTTAAAATGTGGTCT +
Preference number: 5 (lower is better)
Translates to: TKAKKGTCRFCLWHKEVEALCYQ*LVKMWS
Trigger: AGACCACATTTTAACCAGCAACTGGTAACAAAGAGC...CTCTACCTCTTTATGCCAGAGGCAGAACCTACAGGTGCCCTTTTTGGCTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CAA 90 bp ACAAAAGCCAAAAAGGGCACCTGTAGGTTCTGCCTCTGGCATAAAGAGGTAGAGTACTGGAAATTTACATaGGTTCTTGTGAGGAGATTC +
Preference number: 5 (lower is better)
Translates to: TKAKKGTCRFCLWHKEVEYWKFT*VLVRRF
Trigger: GAATCTCCTCACAAGAACCAATGTAAATTTCCAGTA...CTCTACCTCTTTATGCCAGAGGCAGAACCTACAGGTGCCCTTTTTGGCTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CAA 90 bp TTTTTGGAGAATTACCCTATCGATGAGTTCCAAACACACTTTTCAAGCACTTTTTCACTCAGCCAGTTTTaGAGGCTGCTGTCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: FLENYPIDEFQTHFSSTFSLSQF*RLLSGS
Trigger: GCTGCCAGACAGCAGCCTCAAAAACTGGCTGAGTGA...AAAAGTGCTTGAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTCTCCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CAA 90 bp TATATTGCTGTCAAACATTGCTTATGCTGTGTGAGTTGGGGAAAACTTATTTCCATGGGGGAAGTATGGTaGGCAACACAAATGCCTCCC +
Preference number: 5 (lower is better)
Translates to: YIAVKHCLCCVSWGKLISMGEVW*ATQMPP
Trigger: GGGAGGCATTTGTGTTGCCAACCATACTTCCCCCAT...GGAAATAAGTTTTCCCCAACTCACACAGCATAAGCAATGTTTGACAGCAATATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CAA 90 bp TCAGTAAACCACCTTACAATCCATGGGGCTAATGTTACAACAACAACAAAAGCCCAGGTGGCCACAAAGTaGTCCCTTTTCCTAAATACA +
Preference number: 5 (lower is better)
Translates to: SVNHLTIHGANVTTTTKAQVATK*SLFLNT
Trigger: TGTATTTAGGAAAAGGGACAACTTTGTGGCCACCTG...GGCTTTTGTTGTTGTTGTAACATTAGCCCCATGGATTGTAAGGTGGTTTACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CAA 90 bp GTGGTCTACGAGCTGCCTACATATAAATGCGCACACACATTAACTTTGACTCACATCATGACTGAAGTATaGTTGATGCAAGTTCCTTCA +
Preference number: 5 (lower is better)
Translates to: VVYELPTYKCAHTLTLTHIMTEV*LMQVPS
Trigger: TGAAGGAACTTGCATCAACAATACTTCAGTCATGAT...GTGAGTCAAAGTTAATGTGTGTGCGCATTTATATGTAGGCAGCTCGTAGACCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS GCA 90 bp TCGAAGCAGGTAGCTCACCATGTTGTATTTACTACTGTTCCAAAATaGATCACCGAACTGAGGGTTATACTTAATTGCAACTGGATGTAT +
Preference number: 5 (lower is better)
Translates to: SKQVAHHVVFTTVPK*ITELRVILNCNWMY
Trigger: ATACATCCAGTTGCAATTAAGTATAACCCTCAGTTCGGTGATGCATTTTGGAACAGTAGTAAATACAACATGGTGAGCTACCTGCTTCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CAA 90 bp TCAGTAAACCACCTTACAATCCATGGGGCTAATGTTACAACAACAACAAAAGCCTATTGCTGTCAAACATaGCTTATGCTGTGTGAGTTG +
Preference number: 5 (lower is better)
Translates to: SVNHLTIHGANVTTTTKAYCCQT*LMLCEL
Trigger: CAACTCACACAGCATAAGCAATGTTTGACAGCAATA...GGCTTTTGTTGTTGTTGTAACATTAGCCCCATGGATTGTAAGGTGGTTTACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CAA 90 bp TCAGTAAACCACCTTACAATCCATGGGGCTAATGTTACAACAACAACAAAAGCCATCATGACTGAAGTATaGTTGATGCAAGTTCCTTCA +
Preference number: 5 (lower is better)
Translates to: SVNHLTIHGANVTTTTKAIMTEV*LMQVPS
Trigger: TGAAGGAACTTGCATCAACAATACTTCAGTCATGAT...GGCTTTTGTTGTTGTTGTAACATTAGCCCCATGGATTGTAAGGTGGTTTACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CAA 90 bp TTTTTGGAGAATTACCCTATCGATGAGTTCCAAACACACTTTTCAAGCACTTTTCAGGTGGCCACAAAGTaGTCCCTTTTCCTAAATACA +
Preference number: 5 (lower is better)
Translates to: FLENYPIDEFQTHFSSTFQVATK*SLFLNT
Trigger: TGTATTTAGGAAAAGGGACAACTTTGTGGCCACCTG...AAAAGTGCTTGAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTCTCCAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CAA 90 bp ACAGTTTCACATTCTGTACATGGTTACCAGAACAGATACAATACTCTCAGTAGTGCTCTTTGTTACCAGTaGCTGGTTAAAATGTGGTCT +
Preference number: 5 (lower is better)
Translates to: TVSHSVHGYQNRYNTLSSALCYQ*LVKMWS
Trigger: AGACCACATTTTAACCAGCAACTGGTAACAAAGAGC...ACTACTGAGAGTATTGTATCTGTTCTGGTAACCATGTACAGAATGTGAAACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CAA 90 bp TTTTTGGAGAATTACCCTATCGATGAGTTCCAAACACACTTTTCAAGCACTTTTCTTATGCTGTGTGAGTaGGGGAAAACTTATTTCCCC +
Preference number: 5 (lower is better)
Translates to: FLENYPIDEFQTHFSSTFLMLCE*GKTYFP
Trigger: GGGGAAATAAGTTTTCCCCAACTCACACAGCATAAG...AAAAGTGCTTGAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTCTCCAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CAA 90 bp ACAGTTTCACATTCTGTACATGGTTACCAGAACAGATACAATACTCTCAGTAGTAGAGTTTGGGCATTTTaGGAGAATTACCCTATCGAT +
Preference number: 5 (lower is better)
Translates to: TVSHSVHGYQNRYNTLSSRVWAF*ENYPID
Trigger: ATCGATAGGGTAATTCTCCAAAAATGCCCAAACTCT...ACTACTGAGAGTATTGTATCTGTTCTGGTAACCATGTACAGAATGTGAAACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CAA 90 bp TTTTTGGAGAATTACCCTATCGATGAGTTCCAAACACACTTTTCAAGCACTTTTGCACACACATTAACTTaGACTCACTTTTCTTTGGCG +
Preference number: 5 (lower is better)
Translates to: FLENYPIDEFQTHFSSTFAHTLT*THFSLA
Trigger: CGCCAAAGAAAAGTGAGTCAAAGTTAATGTGTGTGC...AAAAGTGCTTGAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTCTCCAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CAA 90 bp TTTTTGGAGAATTACCCTATCGATGAGTTCCAAACACACTTTTCAAGCACTTTTGCTCTTTGTTACCAGTaGCTGGTTAAAATGTGGTCT +
Preference number: 5 (lower is better)
Translates to: FLENYPIDEFQTHFSSTFALCYQ*LVKMWS
Trigger: AGACCACATTTTAACCAGCAACTGGTAACAAAGAGC...AAAAGTGCTTGAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTCTCCAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CAA 90 bp ACAGTTTCACATTCTGTACATGGTTACCAGAACAGATACAATACTCTCAGTAGTTATTGCTGTCAAACATaGCTTATGCTGTGTGAGTTG +
Preference number: 5 (lower is better)
Translates to: TVSHSVHGYQNRYNTLSSYCCQT*LMLCEL
Trigger: CAACTCACACAGCATAAGCAATGTTTGACAGCAATA...ACTACTGAGAGTATTGTATCTGTTCTGGTAACCATGTACAGAATGTGAAACTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CAA 90 bp TATATTGCTGTCAAACATTGCTTATGCTGTGTGAGTTGGGGAAAACTTATTTCCCTTTTTCAATTCGTATaGTGGCCCACTCTAAAGTTT +
Preference number: 5 (lower is better)
Translates to: YIAVKHCLCCVSWGKLISLFQFV*WPTLKF
Trigger: AAACTTTAGAGTGGGCCACAATACGAATTGAAAAAG...GGAAATAAGTTTTCCCCAACTCACACAGCATAAGCAATGTTTGACAGCAATATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CAA 90 bp ACAGTTTCACATTCTGTACATGGTTACCAGAACAGATACAATACTCTCAGTAGTCTTTTTCAATTCGTATaGTGGCCCACTCTAAAGTTT +
Preference number: 5 (lower is better)
Translates to: TVSHSVHGYQNRYNTLSSLFQFV*WPTLKF
Trigger: AAACTTTAGAGTGGGCCACAATACGAATTGAAAAAG...ACTACTGAGAGTATTGTATCTGTTCTGGTAACCATGTACAGAATGTGAAACTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS-3UTR CAA 90 bp TTTTTGGAGAATTACCCTATCGATGAGTTCCAAACACACTTTTCAAGCACTTTTATCATGACTGAAGTATaGTTGATGCAAGTTCCTTCA +
Preference number: 5 (lower is better)
Translates to: FLENYPIDEFQTHFSSTFIMTEV*LMQVPS
Trigger: TGAAGGAACTTGCATCAACAATACTTCAGTCATGAT...AAAAGTGCTTGAAAAGTGTGTTTGGAACTCATCGATAGGGTAATTCTCCAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS CAA 90 bp ACGGAGGCCCTCCCCGAGCCAGGTTCCCTGCGGGAGCACCGCACTTaGGCACACCGGTCGCCGGCGGAGCTGGCACCGGGCCGCGGGCTG +
Preference number: 6 (lower is better)
Translates to: TEALPEPGSLREHRT*AHRSPAELAPGRGL
Trigger: CAGCCCGCGGCCCGGTGCCAGCTCCGCCGGCGACCGGTGTGCCAAAGTGCGGTGCTCCCGCAGGGAACCTGGCTCGGGGAGGGCCTCCGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264409.5
CDS CAA 90 bp CTGGAGGCCCTCCCCGAGCCAGGTTCCCTGCGGGAGCACCGCACTTaGGCACACCGGTCGCCGGCGGAGCTGGCACCGGGCCGCGGGCTG +
Preference number: 6 (lower is better)
Translates to: LEALPEPGSLREHRT*AHRSPAELAPGRGL
Trigger: CAGCCCGCGGCCCGGTGCCAGCTCCGCCGGCGACCGGTGTGCCAAAGTGCGGTGCTCCCGCAGGGAACCTGGCTCGGGGAGGGCCTCCAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395226.6
ENST00000506766.5
CDS CCA 72 bp TCCCCGAGCCAGGTTCCCTGCGGGAGCACCGCACTTTaGCACACCGGTCGCCGGCGGAGCTGGCACCGGGCC +
Preference number: 6 (lower is better)
Translates to: SPSQVPCGSTAL*HTGRRRSWHRA
Trigger: GGCCCGGTGCCAGCTCCGCCGGCGACCGGTGTGCCAAAGTGCGGTGCTCCCGCAGGGAACCTGGCTCGGGGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000506766.5
CDS CAA 72 bp CTCCCCGAGCCAGGTTCCCTGCGGGAGCACCGCACTTaGGCACACCGGTCGCCGGCGGAGCTGGCACCGGGC +
Preference number: 6 (lower is better)
Translates to: LPEPGSLREHRT*AHRSPAELAPG
Trigger: GCCCGGTGCCAGCTCCGCCGGCGACCGGTGTGCCAAAGTGCGGTGCTCCCGCAGGGAACCTGGCTCGGGGAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000506766.5
CDS CCA 72 bp ACCGCGGCGTGCGGAGACCTGGGTAGCGCGAGCCAGTaGTCGGAGCTGCGGGTAAGCGGAGGCACACCGCGG +
Preference number: 6 (lower is better)
Translates to: TAACGDLGSASQ*SELRVSGGTPR
Trigger: CCGCGGTGTGCCTCCGCTTACCCGCAGCTCCGACCACTGGCTCGCGCTACCCAGGTCTCCGCACGCCGCGGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264409.5
CDS GCA 72 bp AAGCTGGCTGCGCTCGGGCGCCCAGCGCCCTATTTCTaGGCGCTGCCCTCGCCCCACCTCCTCCGTCACCCA +
Preference number: 6 (lower is better)
Translates to: KLAALGRPAPYF*ALPSPHLLRHP
Trigger: TGGGTGACGGAGGAGGTGGGGCGAGGGCAGCGCGCAGAAATAGGGCGCTGGGCGCCCGAGCGCAGCCAGCTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506766.5
CDS GCA 72 bp GATGACTCACGGAGGCCCTCCCCGAGCCAGGTTCCCTaGGGGAGCACCGCACTTTGGCACACCGGTCGCCGG +
Preference number: 6 (lower is better)
Translates to: DDSRRPSPSQVP*GSTALWHTGRR
Trigger: CCGGCGACCGGTGTGCCAAAGTGCGGTGCTCCCGCAGGGAACCTGGCTCGGGGAGGGCCTCCGTGAGTCATC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264409.5
CDS GCA 72 bp GAGCGCCGAGCCCGGCACTCACCTTTAGCCCAGGAGTaGCGCAGCCTCCTGGGCGGTCTCCGTTCTTCCCCG +
Preference number: 6 (lower is better)
Translates to: ERRARHSPLAQE*RSLLGGLRSSP
Trigger: CGGGGAAGAACGGAGACCGCCCAGGAGGCTGCGGCACTCCTGGGCTAAAGGTGAGTGCCGGGCTCGGCGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514309.5
ENST00000611707.4
CDS GCA 72 bp AGCGCGCGAGCGCAGCCAGGAACCCGCCCCGCCCGGTaGCTGATTTCCTCTGGGTGGCGATTGCGACAACTC +
Preference number: 6 (lower is better)
Translates to: SARAQPGTRPAR*LISSGWRLRQL
Trigger: GAGTTGTCGCAATCGCCACCCAGAGGAAATCAGGCACCGGGCGGGGCGGGTTCCTGGCTGCGCTCGCGCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264409.5
CDS CCA 72 bp GCCCCACCTCCTCCGTCACCCAACGGGGGAGCTCCCTaGCAGTACTTAGCCCAGGAGTGCCGCAGCCTCCTG +
Preference number: 6 (lower is better)
Translates to: APPPPSPNGGAP*QYLAQECRSLL
Trigger: CAGGAGGCTGCGGCACTCCTGGGCTAAGTACTGCCAGGGAGCTCCCCCGTTGGGTGACGGAGGAGGTGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506766.5
CDS GCA 72 bp CGTCAGCCAGGTGGAAAGGATCTTCCCGGCCAGCTCTaGGCCCTCCATGACTCGGCGCACCCACTCAGGAGA +
Preference number: 6 (lower is better)
Translates to: RQPGGKDLPGQL*ALHDSAHPLRR
Trigger: TCTCCTGAGTGGGTGCGCCGAGTCATGGAGGGCGCAGAGCTGGCCGGGAAGATCCTTTCCACCTGGCTGACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000506766.5
ENST00000509412.1
ENST00000514309.5
ENST00000611707.4
CDS CCA 72 bp TGCCAGTTAACTCTTTCTCCGCTGGCTGCCCAGGTCTaGGCTGAAGCCACCGCGGCGTGCGGAGACCTGGGT +
Preference number: 6 (lower is better)
Translates to: CQLTLSPLAAQV*AEATAACGDLG
Trigger: ACCCAGGTCTCCGCACGCCGCGGTGGCTTCAGCCCAGACCTGGGCAGCCAGCGGAGAAAGAGTTAACTGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264409.5
CDS CCA 72 bp GCCAGGAACCCGCCCCGCCCGGTGCCTGATTTCCTCTaGGTGGCGATTGCGACAACTCAGCAGATGACTCAC +
Preference number: 6 (lower is better)
Translates to: ARNPPRPVPDFL*VAIATTQQMTH
Trigger: GTGAGTCATCTGCTGAGTTGTCGCAATCGCCACCCAGAGGAAATCAGGCACCGGGCGGGGCGGGTTCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264409.5
CDS TCA 72 bp ATTTCCTCTGGGTGGCGATTGCGACAACTCAGCAGATaGCTCACGGAGGCCCTCCCCGAGCCAGGTTCCCTG +
Preference number: 6 (lower is better)
Translates to: ISSGWRLRQLSR*LTEALPEPGSL
Trigger: CAGGGAACCTGGCTCGGGGAGGGCCTCCGTGAGTCATCTGCTGAGTTGTCGCAATCGCCACCCAGAGGAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264409.5
CDS CCA 72 bp GAGAGGGCTCGCACACAGATCCGGCAGCAAGTCAGATaGACCAGTTCACTCAGCCAGTTTTTGAGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: ERARTQIRQQVR*TSSLSQFLRLL
Trigger: CAGCAGCCTCAAAAACTGGCTGAGTGAACTGGTCCATCTGACTTGCTGCCGGATCTGTGTGCGAGCCCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS TCA 72 bp TGCCCAGAGACACTCCGAAGACCGAAGGTAAAAGGATaGAGCCGAGAACCAGCGTCAGCCAGGTGGAAAGGA +
Preference number: 6 (lower is better)
Translates to: CPETLRRPKVKG*SREPASARWKG
Trigger: TCCTTTCCACCTGGCTGACGCTGGTTCTCGGCTTCATCCTTTTACCTTCGGTCTTCGGAGTGTCTCTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000506766.5
ENST00000509412.1
ENST00000514309.5
ENST00000611707.4
CDS CAA 90 bp CAGGGCTCTGTTTCAGTTTTGAGACTCAGTGCTGCTCGGCCCTCTTaGGTAGCAAGGCCAAGATTGGTCAGCTTTTATGCTACTCCAGTG +
Preference number: 6 (lower is better)
Translates to: QGSVSVLRLSAARPS*VARPRLVSFYATPV
Trigger: CACTGGAGTAGCATAAAAGCTGACCAATCTTGGCCTTGCTACCAAAGAGGGCCGAGCAGCACTGAGTCTCAAAACTGAAACAGAGCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513683.1
CDS GCA 72 bp TCACTCAGCCAGTTTTTGAGGCTGCTGTCTGGCAGCTaGCCAACCAGTGTAGTTCCTATAACCAGCAAACTG +
Preference number: 6 (lower is better)
Translates to: SLSQFLRLLSGS*PTSVVPITSKL
Trigger: CAGTTTGCTGGTTATAGGAACTACACTGGTTGGGCAGCTGCCAGACAGCAGCCTCAAAAACTGGCTGAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS GCA 72 bp CAAACAGGGCTCTGTTTCAGTTTTGAGACTCAGTGCTaGTCGGCCCTCTTTGGTAGCAAGGCCAAGATTGGT +
Preference number: 6 (lower is better)
Translates to: QTGLCFSFETQC*SALFGSKAKIG
Trigger: ACCAATCTTGGCCTTGCTACCAAAGAGGGCCGAGCAGCACTGAGTCTCAAAACTGAAACAGAGCCCTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513683.1
CDS CAA 72 bp AGTGCTGCTCGGCCCTCTTTGGTAGCAAGGCCAAGATaGGTCAGCTTTTATGCTACTCCAGTGAATGCTGAG +
Preference number: 6 (lower is better)
Translates to: SAARPSLVARPR*VSFYATPVNAE
Trigger: CTCAGCATTCACTGGAGTAGCATAAAAGCTGACCAATCTTGGCCTTGCTACCAAAGAGGGCCGAGCAGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513683.1
CDS CAA 72 bp GTTTCAGTTTTGAGACTCAGTGCTGCTCGGCCCTCTTaGGTAGCAAGGCCAAGATTGGTCAGCTTTTATGCT +
Preference number: 6 (lower is better)
Translates to: VSVLRLSAARPS*VARPRLVSFYA
Trigger: AGCATAAAAGCTGACCAATCTTGGCCTTGCTACCAAAGAGGGCCGAGCAGCACTGAGTCTCAAAACTGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513683.1
CDS CCA 72 bp AGATTCCATGACACTAGCTCCTCTGAGGAAAACCTCTaGGTCACTTCATCTTCTACAATGGCTTCCAATCCC +
Preference number: 6 (lower is better)
Translates to: RFHDTSSSEENL*VTSSSTMASNP
Trigger: GGGATTGGAAGCCATTGTAGAAGATGAAGTGACCCAGAGGTTTTCCTCAGAGGAGCTAGTGTCATGGAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS GCA 72 bp AAGTTTTCACTAGGATCTTCATGTAGATCTCGGAGATaGCCAGAGACACTCCGAAGACCGAAGGTAAAAGGA +
Preference number: 6 (lower is better)
Translates to: KFSLGSSCRSRR*PETLRRPKVKG
Trigger: TCCTTTTACCTTCGGTCTTCGGAGTGTCTCTGGGCATCTCCGAGATCTACATGAAGATCCTAGTGAAAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000506766.5
ENST00000509412.1
ENST00000514309.5
ENST00000611707.4
CDS GCA 72 bp AAACATCAATGGGGGAAGTATGGTTGGCAACACAAATaGCTCCCTTCTGGGGTCTGTACTGCTTGTTATGAT +
Preference number: 6 (lower is better)
Translates to: KHQWGKYGWQHK*LPSGVCTACYD
Trigger: ATCATAACAAGCAGTACAGACCCCAGAAGGGAGGCATTTGTGTTGCCAACCATACTTCCCCCATTGATGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000513683.1
ENST00000611707.4
CDS CCA 72 bp AGCACCCACACCATAGTGAGCCGCAGACTGATGTACTaGAAATTTACATTGGTTCTTGTGAGGAGATTCCAT +
Preference number: 6 (lower is better)
Translates to: STHTIVSRRLMY*KFTLVLVRRFH
Trigger: ATGGAATCTCCTCACAAGAACCAATGTAAATTTCCAGTACATCAGTCTGCGGCTCACTATGGTGTGGGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000611707.4
CDS TCA 72 bp GTTCTAGATCTAAAGGCTGTCATCCGTCCTCTTAGCTaGGAGATCCATTGCCCACAATCATCTTGCTGTAAT +
Preference number: 6 (lower is better)
Translates to: VLDLKAVIRPLS*EIHCPQSSCCN
Trigger: ATTACAGCAAGATGATTGTGGGCAATGGATCTCTCAGCTAAGAGGACGGATGACAGCCTTTAGATCTAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000509044.1
ENST00000611707.4
CDS CCA 72 bp ACCAACAGAAGCAGAGTTTTTAAGAATCGACTCCTTTaGGGTTCCTTTTTCAATTCGTATTGTGGCCCACTC +
Preference number: 6 (lower is better)
Translates to: TNRSRVFKNRLL*GSFFNSYCGPL
Trigger: GAGTGGGCCACAATACGAATTGAAAAAGGAACCCCAAAGGAGTCGATTCTTAAAAACTCTGCTTCTGTTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000506766.5
ENST00000514309.5
ENST00000611707.4
CDS CCA 72 bp CATAACATCCATCCGTTGTCAAGATTAAAACATCAATaGGGGAAGTATGGTTGGCAACACAAATGCCTCCCT +
Preference number: 6 (lower is better)
Translates to: HNIHPLSRLKHQ*GKYGWQHKCLP
Trigger: AGGGAGGCATTTGTGTTGCCAACCATACTTCCCCCATTGATGTTTTAATCTTGACAACGGATGGATGTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264409.5
ENST00000395226.6
ENST00000513683.1
ENST00000611707.4