RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPAM (Homo sapiens)

Ensembl gene IDs: ENSG00000119927

Ensembl transcript IDs: ENST00000348367.9, ENST00000369425.5, ENST00000480130.5, ENST00000498541.1

Found 441 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTTCCAGGAGATCACTTCGGGACAGGGCAGGCCTGACCCTGCGATaGCACCTTCAACTCTTGAGCCAGAAGCTGGTACCTACAAGGAAC +
Preference number: 1 (lower is better)
Translates to: SSRRSLRDRAGLTLR*HLQLLSQKLVPTRN
Trigger: GTTCCTTGTAGGTACCAGCTTCTGGCTCAAGAGTTGAAGGTGCCATCGCAGGGTCAGGCCTGCCCTGTCCCGAAGTGATCTCCTGGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR CCA 90 bp CTGGACAGGTTGTGCACGGCACAACTCGAGTGGGTACCAGTCACCTaGACTGGGGTGCAGTACACAATCTGTGTGCAGTACAGAAAGCCC +
Preference number: 1 (lower is better)
Translates to: LDRLCTAQLEWVPVT*TGVQYTICVQYRKP
Trigger: GGGCTTTCTGTACTGCACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGTACCCACTCGAGTTGTGCCGTGCACAACCTGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR GCA 90 bp TGTGCACGGCACAACTCGAGTGGGTACCAGTCACCTGGACTGGGGTaGAGTACACAATCTGTGTGCAGTACAGAAAGCCCTCATCAGCTG +
Preference number: 1 (lower is better)
Translates to: CARHNSSGYQSPGLG*STQSVCSTESPHQL
Trigger: CAGCTGATGAGGGCTTTCTGTACTGCACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGTACCCACTCGAGTTGTGCCGTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR CCA 90 bp CAGGTTGTGCACGGCACAACTCGAGTGGGTACCAGTCACCTGGACTaGGGTGCAGTACACAATCTGTGTGCAGTACAGAAAGCCCTCATC +
Preference number: 1 (lower is better)
Translates to: QVVHGTTRVGTSHLD*GAVHNLCAVQKALI
Trigger: GATGAGGGCTTTCTGTACTGCACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGTACCCACTCGAGTTGTGCCGTGCACAACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR CCA 90 bp AAGTGGACAGAGGACTTTCTCTGGAGAGCCAGTAACGTGAGAAGATaGCCACTCACATCAGCACTACATGAAAGCGGCCCCCTGCCCCTC +
Preference number: 1 (lower is better)
Translates to: KWTEDFLWRASNVRR*PLTSALHESGPLPL
Trigger: GAGGGGCAGGGGGCCGCTTTCATGTAGTGCTGATGTGAGTGGCCATCTTCTCACGTTACTGGCTCTCCAGAGAAAGTCCTCTGTCCACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR CCA 90 bp CACCACATGCATATACTGGACAGGTTGTGCACGGCACAACTCGAGTaGGTACCAGTCACCTGGACTGGGGTGCAGTACACAATCTGTGTG +
Preference number: 1 (lower is better)
Translates to: HHMHILDRLCTAQLE*VPVTWTGVQYTICV
Trigger: CACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGTACCCACTCGAGTTGTGCCGTGCACAACCTGTCCAGTATATGCATGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR GCA 90 bp GGCCACTCACATCAGCACTACATGAAAGCGGCCCCCTGCCCCTCATaGAGAGAATCTCTGCTGGAAACAACTGCTGGCTTTCAAACACAT +
Preference number: 1 (lower is better)
Translates to: GHSHQHYMKAAPCPS*RESLLETTAGFQTH
Trigger: ATGTGTTTGAAAGCCAGCAGTTGTTTCCAGCAGAGATTCTCTGCATGAGGGGCAGGGGGCCGCTTTCATGTAGTGCTGATGTGAGTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR CCA 90 bp TGCTTTATGGCCGAGAGGCTCTCACTGTACCTACCCAAAACACACTaGTTCGGTCAAGCCCCTCTGGAGTGTGAAAGCAAGATCACTGCC +
Preference number: 1 (lower is better)
Translates to: CFMAERLSLYLPKTH*FGQAPLECESKITA
Trigger: GGCAGTGATCTTGCTTTCACACTCCAGAGGGGCTTGACCGAACCAGTGTGTTTTGGGTAGGTACAGTGAGAGCCTCTCGGCCATAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR GCA 90 bp AGTGGGTACCAGTCACCTGGACTGGGGTGCAGTACACAATCTGTGTaGAGTACAGAAAGCCCTCATCAGCTGTGGCCAGAGAACTGTATT +
Preference number: 1 (lower is better)
Translates to: SGYQSPGLGCSTQSV*STESPHQLWPENCI
Trigger: AATACAGTTCTCTGGCCACAGCTGATGAGGGCTTTCTGTACTGCACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGTACCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR GCA 90 bp TGCAGAAAGACCAATGGGAGACCACCAAGATTATCTCACTCCTTCTaGAGCACCTATTCCCTGCCTCCCCTAAATGGCCTTTGCCCACAG +
Preference number: 1 (lower is better)
Translates to: CRKTNGRPPRLSHSF*STYSLPPLNGLCPQ
Trigger: CTGTGGGCAAAGGCCATTTAGGGGAGGCAGGGAATAGGTGCTGCAGAAGGAGTGAGATAATCTTGGTGGTCTCCCATTGGTCTTTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR TCA 90 bp TATTTTCTTTGCTTAGGTTGGCAAAGCAGCAGCTCTTTGCAGCAATaGCAGGCAGGGCAGAGTGTCGACTGGGAAGCGAGTCCCAATCTT +
Preference number: 1 (lower is better)
Translates to: YFLCLGWQSSSSLQQ*QAGQSVDWEASPNL
Trigger: AAGATTGGGACTCGCTTCCCAGTCGACACTCTGCCCTGCCTGTCATTGCTGCAAAGAGCTGCTGCTTTGCCAACCTAAGCAAAGAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR TCA 90 bp TCATCACTAAAAATAGCCGCTCCTAAGACCAGGCCCTCCATGGTTTaGAGCCTGGGCTCAACAGTCACTCAAGTCTGCAGAAAGACCAAT +
Preference number: 1 (lower is better)
Translates to: SSLKIAAPKTRPSMV*SLGSTVTQVCRKTN
Trigger: ATTGGTCTTTCTGCAGACTTGAGTGACTGTTGAGCCCAGGCTTCAAACCATGGAGGGCCTGGTCTTAGGAGCGGCTATTTTTAGTGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR TCA 90 bp GGAACCAGAGAAAGCACAGGCCTCGAGGTTAGGAAACAAGAATTCTaGTCCCGAGATTACCCATTAATTAGCAGTGTGACCTGGGGTATT +
Preference number: 1 (lower is better)
Translates to: GTRESTGLEVRKQEF*SRDYPLISSVTWGI
Trigger: AATACCCCAGGTCACACTGCTAATTAATGGGTAATCTCGGGATCAGAATTCTTGTTTCCTAACCTCGAGGCCTGTGCTTTCTCTGGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR CCA 90 bp TGCAGTACACAATCTGTGTGCAGTACAGAAAGCCCTCATCAGCTGTaGCCAGAGAACTGTATTCTAACAGTCTGTCAGCTCAAGCTAATC +
Preference number: 1 (lower is better)
Translates to: CSTQSVCSTESPHQL*PENCILTVCQLKLI
Trigger: GATTAGCTTGAGCTGACAGACTGTTAGAATACAGTTCTCTGGCCACAGCTGATGAGGGCTTTCTGTACTGCACACAGATTGTGTACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR CCA 90 bp TGTTGTGGGAGTACAAGTAGGTATAATCCCTTGGAAACTGTTTGGTaGTATCTACCAAAGCCGAATATACCCAGAGCCTACAACCAGGCA +
Preference number: 1 (lower is better)
Translates to: CCGSTSRYNPLETVW*YLPKPNIPRAYNQA
Trigger: TGCCTGGTTGTAGGCTCTGGGTATATTCGGCTTTGGTAGATACCACCAAACAGTTTCCAAGGGATTATACCTACTTGTACTCCCACAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR GCA 90 bp GAACATCTCACAGAGCACTCATATTACATGGAGTGCTATGGGAAATaGTTTTCCCCATCCAGGTTACTGGCAATTCCACAATTTGGGCTT +
Preference number: 1 (lower is better)
Translates to: EHLTEHSYYMECYGK*FSPSRLLAIPQFGL
Trigger: AAGCCCAAATTGTGGAATTGCCAGTAACCTGGATGGGGAAAAGCATTTCCCATAGCACTCCATGTAATATGAGTGCTCTGTGAGATGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR CCA 90 bp CCAAGAAACAGCTGTACCTGTGAGAGGCAGGTATTACCTGAGGGGTaGACGAGGTACAGACATAAAACAGGAAGGGTTCTAAATATATTT +
Preference number: 1 (lower is better)
Translates to: PRNSCTCERQVLPEG*TRYRHKTGRVLNIF
Trigger: AAATATATTTAGAACCCTTCCTGTTTTATGTCTGTACCTCGTCCACCCCTCAGGTAATACCTGCCTCTCACAGGTACAGCTGTTTCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR GCA 90 bp ATCTATTCAACGCCACACTGGACGTTACAAAATGCATGCATATTCTaGCCCAGTGCTATCTGTTCATTACCGTTTTGTCTCCTTAAAGAA +
Preference number: 1 (lower is better)
Translates to: IYSTPHWTLQNACIF*PSAICSLPFCLLKE
Trigger: TTCTTTAAGGAGACAAAACGGTAATGAACAGATAGCACTGGGGCAGAATATGCATGCATTTTGTAACGTCCAGTGTGGCGTTGAATAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR GCA 90 bp TTGTGTTCATTGAACAGCCACCTAGAAGAAATTTTCATAAATGAATaGCCTACTTGTGATACGCTGTCATCACTAAAAATAGCCGCTCCT +
Preference number: 1 (lower is better)
Translates to: LCSLNSHLEEIFINE*PTCDTLSSLKIAAP
Trigger: AGGAGCGGCTATTTTTAGTGATGACAGCGTATCACAAGTAGGGCATTCATTTATGAAAATTTCTTCTAGGTGGCTGTTCAATGAACACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR TCA 90 bp ATTTCTAAATCTGACAGCAAAGGACAGCACAGTGATACCTGGGTGTaGTATATATCAGTCCACTCAATTTATAAAGCACTTTGGGATAAA +
Preference number: 1 (lower is better)
Translates to: ISKSDSKGQHSDTWV*YISVHSIYKALWDK
Trigger: TTTATCCCAAAGTGCTTTATAAATTGAGTGGACTGATATATATCACACCCAGGTATCACTGTGCTGTCCTTTGCTGTCAGATTTAGAAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR TCA 90 bp GGGGTGCAGTACACAATCTGTGTGCAGTACAGAAAGCCCTCATCAGCTGTGGCCGGGACAGGGCAGGCCTaGCCCTGCGATGGCACCTTC +
Preference number: 2 (lower is better)
Translates to: GVQYTICVQYRKPSSAVAGTGQA*PCDGTF
Trigger: GAAGGTGCCATCGCAGGGTCAGGCCTGCCCTGTCCC...GGCCACAGCTGATGAGGGCTTTCTGTACTGCACACAGATTGTGTACTGCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR CAA 90 bp GATGCAGAGCTGGGAAGATCACAGATCCATGGAGGGAGAAGGCACTaGTCTTCCAGGAGATCACTTCGGGACAGGGCAGGCCTGACCCTG +
Preference number: 2 (lower is better)
Translates to: DAELGRSQIHGGRRH*SSRRSLRDRAGLTL
Trigger: CAGGGTCAGGCCTGCCCTGTCCCGAAGTGATCTCCTGGAAGACAAGTGCCTTCTCCCTCCATGGATCTGTGATCTTCCCAGCTCTGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR TCA 90 bp CCGCTCCTAAGACCAGGCCCTCCATGGTTTGAAGCCTGGGCTCAACAGTCACTCCACCAGGACTCCAGCTaGTCTCACTGCAGCATAAAC +
Preference number: 2 (lower is better)
Translates to: PLLRPGPPWFEAWAQQSLHQDSS*SHCSIN
Trigger: GTTTATGCTGCAGTGAGATCAGCTGGAGTCCTGGTG...GAGTGACTGTTGAGCCCAGGCTTCAAACCATGGAGGGCCTGGTCTTAGGAGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR-3UTR CCA 90 bp GGGGTGCAGTACACAATCTGTGTGCAGTACAGAAAGCCCTCATCAGCTGTGGCCGGCCTGACCCTGCGATaGCACCTTCAACTCTTGAGC +
Preference number: 2 (lower is better)
Translates to: GVQYTICVQYRKPSSAVAGLTLR*HLQLLS
Trigger: GCTCAAGAGTTGAAGGTGCCATCGCAGGGTCAGGCC...GGCCACAGCTGATGAGGGCTTTCTGTACTGCACACAGATTGTGTACTGCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR CCA 90 bp TCACATCAGCACTACATGAAAGCGGCCCCCTGCCCCTCATGCAGAGAATCTCTGCCTGCCTCCCCTAAATaGCCTTTGCCCACAGTCCAG +
Preference number: 2 (lower is better)
Translates to: SHQHYMKAAPCPSCRESLPASPK*PLPTVQ
Trigger: CTGGACTGTGGGCAAAGGCCATTTAGGGGAGGCAGG...CAGAGATTCTCTGCATGAGGGGCAGGGGGCCGCTTTCATGTAGTGCTGATGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR CAA 90 bp CTTCGGGACAGGGCAGGCCTGACCCTGCGATGGCACCTTCAACTCTaGAGCCAGAAGCTGGTACCTACAAGGAACTCATCTCATGACCTT +
Preference number: 2 (lower is better)
Translates to: LRDRAGLTLRWHLQL*SQKLVPTRNSSHDL
Trigger: AAGGTCATGAGATGAGTTCCTTGTAGGTACCAGCTTCTGGCTCAAGAGTTGAAGGTGCCATCGCAGGGTCAGGCCTGCCCTGTCCCGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR TCA 90 bp GGGTACCAGTCACCTGGACTGGGGTGCAGTACACAATCTGTGTGCAGTACAGAAGAGGCAGGTATTACCTaGGGGGTGGACGAGGTACAG +
Preference number: 2 (lower is better)
Translates to: GYQSPGLGCSTQSVCSTEEAGIT*GVDEVQ
Trigger: CTGTACCTCGTCCACCCCTCAGGTAATACCTGCCTC...TTCTGTACTGCACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGTACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR TCA 90 bp GGCAAGTGGACAGAGGACTTTCTCTGGAGAGCCAGTAACGTGAGAAGATGGCCAAGGCCCTCCATGGTTTaGAGCCTGGGCTCAACAGTC +
Preference number: 2 (lower is better)
Translates to: GKWTEDFLWRASNVRRWPRPSMV*SLGSTV
Trigger: GACTGTTGAGCCCAGGCTTCAAACCATGGAGGGCCT...TGGCCATCTTCTCACGTTACTGGCTCTCCAGAGAAAGTCCTCTGTCCACTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR-3UTR CCA 90 bp TCAGCACTACATGAAAGCGGCCCCCTGCCCCTCATGCAGAGAATCTCTGCTGGACTACCCAAAACACACTaGTTCGGTCAAGCCCCTCTG +
Preference number: 2 (lower is better)
Translates to: SALHESGPLPLMQRISAGLPKTH*FGQAPL
Trigger: CAGAGGGGCTTGACCGAACCAGTGTGTTTTGGGTAG...TCCAGCAGAGATTCTCTGCATGAGGGGCAGGGGGCCGCTTTCATGTAGTGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR-3UTR CCA 90 bp CCCCTGCCCCTCATGCAGAGAATCTCTGCTGGAAACAACTGCTGGCTTTCAAACGACGGCGGTGCTTTATaGCCGAGAGGCTCTCACTGT +
Preference number: 2 (lower is better)
Translates to: PLPLMQRISAGNNCWLSNDGGAL*PRGSHC
Trigger: ACAGTGAGAGCCTCTCGGCCATAAAGCACCGCCGTC...GTTTGAAAGCCAGCAGTTGTTTCCAGCAGAGATTCTCTGCATGAGGGGCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR-3UTR TCA 90 bp GGGTACCAGTCACCTGGACTGGGGTGCAGTACACAATCTGTGTGCAGTACAGAAGGCACCTTCAACTCTTaGGCCAGAAGCTGGTACCTA +
Preference number: 2 (lower is better)
Translates to: GYQSPGLGCSTQSVCSTEGTFNS*ARSWYL
Trigger: TAGGTACCAGCTTCTGGCTCAAGAGTTGAAGGTGCC...TTCTGTACTGCACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGTACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR GCA 90 bp ACCCAGTGGTACACAGATGATTGTACATCAGTGGAACCAGAGAAAGCACAGGCCGCCCCCTGCCCCTCATaGAGAGAATCTCTGCTGGAA +
Preference number: 2 (lower is better)
Translates to: TQWYTDDCTSVEPEKAQAAPCPS*RESLLE
Trigger: TTCCAGCAGAGATTCTCTGCATGAGGGGCAGGGGGC...GGCCTGTGCTTTCTCTGGTTCCACTGATGTACAATCATCTGTGTACCACTGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR-3UTR CCA 90 bp TATTCCCTGCCTCCCCTAAATGGCCTTTGCCCACAGTCCAGCACTGTGGGGAATTCGGTCAAGCCCCTCTaGAGTGTGAAAGCAAGATCA +
Preference number: 2 (lower is better)
Translates to: YSLPPLNGLCPQSSTVGNSVKPL*SVKARS
Trigger: TGATCTTGCTTTCACACTCCAGAGGGGCTTGACCGA...ATTCCCCACAGTGCTGGACTGTGGGCAAAGGCCATTTAGGGGAGGCAGGGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR-3UTR GCA 90 bp ACACAAGGCAAGTGGACAGAGGACTTTCTCTGGAGAGCCAGTAACGTGAGAAGACCCCTAAATGGCCTTTaGCCACAGTCCAGCACTGTG +
Preference number: 2 (lower is better)
Translates to: TQGKWTEDFLWRASNVRRPLNGL*PQSSTV
Trigger: CACAGTGCTGGACTGTGGGCAAAGGCCATTTAGGGG...TCTTCTCACGTTACTGGCTCTCCAGAGAAAGTCCTCTGTCCACTTGCCTTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR-3UTR GCA 90 bp CCCCTGCCCCTCATGCAGAGAATCTCTGCTGGAAACAACTGCTGGCTTTCAAACTTATCTCACTCCTTCTaGAGCACCTATTCCCTGCCT +
Preference number: 2 (lower is better)
Translates to: PLPLMQRISAGNNCWLSNLSHSF*STYSLP
Trigger: AGGCAGGGAATAGGTGCTGCAGAAGGAGTGAGATAA...GTTTGAAAGCCAGCAGTTGTTTCCAGCAGAGATTCTCTGCATGAGGGGCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR-3UTR CCA 90 bp GGGGTGCAGTACACAATCTGTGTGCAGTACAGAAAGCCCTCATCAGCTGTGGCCGTATTACCTGAGGGGTaGACGAGGTACAGACATAAA +
Preference number: 2 (lower is better)
Translates to: GVQYTICVQYRKPSSAVAVLPEG*TRYRHK
Trigger: TTTATGTCTGTACCTCGTCCACCCCTCAGGTAATAC...GGCCACAGCTGATGAGGGCTTTCTGTACTGCACACAGATTGTGTACTGCACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR TCA 90 bp GGGTACCAGTCACCTGGACTGGGGTGCAGTACACAATCTGTGTGCAGTACAGAAAAGGAACTCATCTCATaGCCTTCATTTGCCAGCAGT +
Preference number: 2 (lower is better)
Translates to: GYQSPGLGCSTQSVCSTEKELIS*PSFASS
Trigger: ACTGCTGGCAAATGAAGGTCATGAGATGAGTTCCTT...TTCTGTACTGCACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGTACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR CCA 90 bp ACCCAGTGGTACACAGATGATTGTACATCAGTGGAACCAGAGAAAGCACAGGCCGAGCAGCCAGGTCAGTaGCAGCTCAATAGCAAAACT +
Preference number: 2 (lower is better)
Translates to: TQWYTDDCTSVEPEKAQAEQPGQ*QLNSKT
Trigger: AGTTTTGCTATTGAGCTGCCACTGACCTGGCTGCTC...GGCCTGTGCTTTCTCTGGTTCCACTGATGTACAATCATCTGTGTACCACTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR-3UTR TCA 90 bp TATTCCCTGCCTCCCCTAAATGGCCTTTGCCCACAGTCCAGCACTGTGGGGAATTCAACTCAAACAGTTTaGGTGTCTTTACCACACAGA +
Preference number: 2 (lower is better)
Translates to: YSLPPLNGLCPQSSTVGNSTQTV*VSLPHR
Trigger: TCTGTGTGGTAAAGACACTCAAACTGTTTGAGTTGA...ATTCCCCACAGTGCTGGACTGTGGGCAAAGGCCATTTAGGGGAGGCAGGGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR-3UTR TCA 90 bp TTGCAGATACTCAGGTTCTGGAACAGGACCACTGAAGTTGTGAACAAAGATGGCGAGGGACAGCAAGAGTaGCTCAAAAAGAGCAGCCAG +
Preference number: 2 (lower is better)
Translates to: LQILRFWNRTTEVVNKDGEGQQE*LKKSSQ
Trigger: CTGGCTGCTCTTTTTGAGTCACTCTTGCTGTCCCTC...GCCATCTTTGTTCACAACTTCAGTGGTCCTGTTCCAGAACCTGAGTATCTGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR-3UTR TCA 90 bp ACCCAGTGGTACACAGATGATTGTACATCAGTGGAACCAGAGAAAGCACAGGCCCTGGAACAGGACCACTaGAGTTGTGAACAAAGATGG +
Preference number: 2 (lower is better)
Translates to: TQWYTDDCTSVEPEKAQALEQDH*SCEQRW
Trigger: CCATCTTTGTTCACAACTTCAGTGGTCCTGTTCCAG...GGCCTGTGCTTTCTCTGGTTCCACTGATGTACAATCATCTGTGTACCACTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR-3UTR CCA 90 bp TTCCAGAAGGAAGACTCGAAGCCATCTCAGTTAACAGTTCTACACATTTCCCACGGGCAGAGTGTCGACTaGGAAGCGAGTCCCAATCTT +
Preference number: 2 (lower is better)
Translates to: FQKEDSKPSQLTVLHISHGQSVD*EASPNL
Trigger: AAGATTGGGACTCGCTTCCCAGTCGACACTCTGCCC...GTGGGAAATGTGTAGAACTGTTAACTGAGATGGCTTCGAGTCTTCCTTCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR CCA 90 bp ACCCAGTGGTACACAGATGATTGTACATCAGTGGAACCAGAGAAAGCACAGGCCACAGAGGACTTTCTCTaGAGAGCCAGTAACGTGAGA +
Preference number: 2 (lower is better)
Translates to: TQWYTDDCTSVEPEKAQATEDFL*RASNVR
Trigger: TCTCACGTTACTGGCTCTCCAGAGAAAGTCCTCTGT...GGCCTGTGCTTTCTCTGGTTCCACTGATGTACAATCATCTGTGTACCACTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR-3UTR TCA 90 bp CCCCTGCCCCTCATGCAGAGAATCTCTGCTGGAAACAACTGCTGGCTTTCAAACAAAGAGCTTAATATATaGAATTTTGGGAGGGACAGC +
Preference number: 2 (lower is better)
Translates to: PLPLMQRISAGNNCWLSNKELNI*NFGRDS
Trigger: GCTGTCCCTCCCAAAATTTCATATATTAAGCTCTTT...GTTTGAAAGCCAGCAGTTGTTTCCAGCAGAGATTCTCTGCATGAGGGGCAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR-3UTR CCA 90 bp GGGTACCAGTCACCTGGACTGGGGTGCAGTACACAATCTGTGTGCAGTACAGAAAGGAAAACTGCTATTTaGTTGGAGGATTTCCAAGAA +
Preference number: 2 (lower is better)
Translates to: GYQSPGLGCSTQSVCSTERKTAI*LEDFQE
Trigger: TTCTTGGAAATCCTCCAACCAAATAGCAGTTTTCCT...TTCTGTACTGCACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGTACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR CCA 90 bp GGGTACCAGTCACCTGGACTGGGGTGCAGTACACAATCTGTGTGCAGTACAGAAATTTATAAAGCACTTTaGGATAAAAGGTGCTCCCAT +
Preference number: 2 (lower is better)
Translates to: GYQSPGLGCSTQSVCSTEIYKAL*DKRCSH
Trigger: ATGGGAGCACCTTTTATCCCAAAGTGCTTTATAAAT...TTCTGTACTGCACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGTACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR CCA 90 bp GCTAGCAAATCATACATTGCATTCCCCAAAGCATCTGAACGTACTTCTAGAAAAACGGCACAACTCGAGTaGGTACCAGTCACCTGGACT +
Preference number: 2 (lower is better)
Translates to: ASKSYIAFPKASERTSRKTAQLE*VPVTWT
Trigger: AGTCCAGGTGACTGGTACCCACTCGAGTTGTGCCGT...TTTTCTAGAAGTACGTTCAGATGCTTTGGGGAATGCAATGTATGATTTGCTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR CCA 90 bp TTGCAGATACTCAGGTTCTGGAACAGGACCACTGAAGTTGTGAACAAAGATGGCCTGCAGAAAGACCAATaGGAGACCACCAAGATTATC +
Preference number: 2 (lower is better)
Translates to: LQILRFWNRTTEVVNKDGLQKDQ*ETTKII
Trigger: GATAATCTTGGTGGTCTCCCATTGGTCTTTCTGCAG...GCCATCTTTGTTCACAACTTCAGTGGTCCTGTTCCAGAACCTGAGTATCTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR-3UTR TCA 90 bp CACCATTTCTATAAAACACTGATGAACATCTCACAGAGCACTCATATTACATGGAGCTCTTTGCAGCAATaGCAGGCAGGGCAGAGTGTC +
Preference number: 2 (lower is better)
Translates to: HHFYKTLMNISQSTHITWSSLQQ*QAGQSV
Trigger: GACACTCTGCCCTGCCTGTCATTGCTGCAAAGAGCT...CCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGTTTTATAGAAATGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR TCA 90 bp TTCCAGAAGGAAGACTCGAAGCCATCTCAGTTAACAGTTCTACACATTTCCCACTCAGTCATGAGGCACTaGAGAATGAGTTGTGCTGAA +
Preference number: 2 (lower is better)
Translates to: FQKEDSKPSQLTVLHISHSVMRH*RMSCAE
Trigger: TTCAGCACAACTCATTCTTCAGTGCCTCATGACTGA...GTGGGAAATGTGTAGAACTGTTAACTGAGATGGCTTCGAGTCTTCCTTCTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR GCA 90 bp GCTAGCAAATCATACATTGCATTCCCCAAAGCATCTGAACGTACTTCTAGAAAATCACCTGGACTGGGGTaGAGTACACAATCTGTGTGC +
Preference number: 2 (lower is better)
Translates to: ASKSYIAFPKASERTSRKSPGLG*STQSVC
Trigger: GCACACAGATTGTGTACTGCACCCCAGTCCAGGTGA...TTTTCTAGAAGTACGTTCAGATGCTTTGGGGAATGCAATGTATGATTTGCTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR GCA 90 bp ACCTACCCAAAACACACTGGTTCGGTCAAGCCCCTCTGGAGTGTGAAAGCAAGAGTAGGTAAACAGGTATaGACCTGTGTATTTCATAAA +
Preference number: 2 (lower is better)
Translates to: TYPKHTGSVKPLWSVKARVGKQV*TCVFHK
Trigger: TTTATGAAATACACAGGTGCATACCTGTTTACCTAC...TCTTGCTTTCACACTCCAGAGGGGCTTGACCGAACCAGTGTGTTTTGGGTAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR-3UTR GCA 90 bp ACCCAGTGGTACACAGATGATTGTACATCAGTGGAACCAGAGAAAGCACAGGCCTATTTGTGCAACTTTTaGAGATACTCAGGTTCTGGA +
Preference number: 2 (lower is better)
Translates to: TQWYTDDCTSVEPEKAQAYLCNF*RYSGSG
Trigger: TCCAGAACCTGAGTATCTGCAAAAGTTGCACAAATA...GGCCTGTGCTTTCTCTGGTTCCACTGATGTACAATCATCTGTGTACCACTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR-3UTR CCA 90 bp CACCATTTCTATAAAACACTGATGAACATCTCACAGAGCACTCATATTACATGGTGGGTACCAGTCACCTaGACTGGGGTGCAGTACACA +
Preference number: 2 (lower is better)
Translates to: HHFYKTLMNISQSTHITWWVPVT*TGVQYT
Trigger: TGTGTACTGCACCCCAGTCCAGGTGACTGGTACCCA...CCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGTTTTATAGAAATGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR CAA 90 bp ATTCATCCATGTATTCTGATACGTTCAGTGAAAAAGCCAGGATCATaGGGGCTGTTCTCTCTATCAAAGGAAAGAGCTCCGATCACCTAC +
Preference number: 2 (lower is better)
Translates to: IHPCILIRSVKKPGS*GLFSLSKERAPITY
Trigger: GTAGGTGATCGGAGCTCTTTCCTTTGATAGAGAGAACAGCCCCAATGATCCTGGCTTTTTCACTGAACGTATCAGAATACATGGATGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR GCA 90 bp CACCATTTCTATAAAACACTGATGAACATCTCACAGAGCACTCATATTACATGGAAAGCAGCAGCTCTTTaGAGCAATGACAGGCAGGGC +
Preference number: 2 (lower is better)
Translates to: HHFYKTLMNISQSTHITWKAAAL*SNDRQG
Trigger: GCCCTGCCTGTCATTGCTGCAAAGAGCTGCTGCTTT...CCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGTTTTATAGAAATGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR GCA 90 bp ACCCAGTGGTACACAGATGATTGTACATCAGTGGAACCAGAGAAAGCACAGGCCATTTTCATAAATGAATaGCCTACTTGTGATACGCTG +
Preference number: 2 (lower is better)
Translates to: TQWYTDDCTSVEPEKAQAIFINE*PTCDTL
Trigger: CAGCGTATCACAAGTAGGGCATTCATTTATGAAAAT...GGCCTGTGCTTTCTCTGGTTCCACTGATGTACAATCATCTGTGTACCACTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR-3UTR CCA 90 bp GCTAGCAAATCATACATTGCATTCCCCAAAGCATCTGAACGTACTTCTAGAAAAACCACATGCATATACTaGACAGGTTGTGCACGGCAC +
Preference number: 2 (lower is better)
Translates to: ASKSYIAFPKASERTSRKTTCIY*TGCARH
Trigger: GTGCCGTGCACAACCTGTCCAGTATATGCATGTGGT...TTTTCTAGAAGTACGTTCAGATGCTTTGGGGAATGCAATGTATGATTTGCTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR CCA 90 bp TCAAGTAGTTTCAGCTCCAAACTACAACTGTATAAAATAGTACTCCCACCCCAACCATGGTTTGAAGCCTaGGCTCAACAGTCACTCAAG +
Preference number: 2 (lower is better)
Translates to: SSSFSSKLQLYKIVLPPQPWFEA*AQQSLK
Trigger: CTTGAGTGACTGTTGAGCCCAGGCTTCAAACCATGG...TTGGGGTGGGAGTACTATTTTATACAGTTGTAGTTTGGAGCTGAAACTACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR-3UTR GCA 90 bp TTAATACCTTCCATCAAGACATTTCAGAGCTCTAGACGTTTAGAAATAAGGTCAATACTGGACAGGTTGTaGACGGCACAACTCGAGTGG +
Preference number: 2 (lower is better)
Translates to: LIPSIKTFQSSRRLEIRSILDRL*TAQLEW
Trigger: CCACTCGAGTTGTGCCGTGCACAACCTGTCCAGTAT...TGACCTTATTTCTAAACGTCTAGAGCTCTGAAATGTCTTGATGGAAGGTATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR CCA 90 bp GCTAGCAAATCATACATTGCATTCCCCAAAGCATCTGAACGTACTTCTAGAAAAAGCCCTCATCAGCTGTaGCCAGAGAACTGTATTCTA +
Preference number: 2 (lower is better)
Translates to: ASKSYIAFPKASERTSRKSPHQL*PENCIL
Trigger: TAGAATACAGTTCTCTGGCCACAGCTGATGAGGGCT...TTTTCTAGAAGTACGTTCAGATGCTTTGGGGAATGCAATGTATGATTTGCTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR CCA 90 bp TTCCAGAAGGAAGACTCGAAGCCATCTCAGTTAACAGTTCTACACATTTCCCACAAAGGTCAGCTTGTCTaGATGAGCATAACTTTGGTT +
Preference number: 2 (lower is better)
Translates to: FQKEDSKPSQLTVLHISHKGQLV*MSITLV
Trigger: AACCAAAGTTATGCTCATCCAGACAAGCTGACCTTT...GTGGGAAATGTGTAGAACTGTTAACTGAGATGGCTTCGAGTCTTCCTTCTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR TCA 90 bp TTAATACCTTCCATCAAGACATTTCAGAGCTCTAGACGTTTAGAAATAAGGTCAACCACAGTCTTCCCCTaGAGAAGGGCATGCATTTCA +
Preference number: 2 (lower is better)
Translates to: LIPSIKTFQSSRRLEIRSTTVFP*RRACIS
Trigger: TGAAATGCATGCCCTTCTTCAGGGGAAGACTGTGGT...TGACCTTATTTCTAAACGTCTAGAGCTCTGAAATGTCTTGATGGAAGGTATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR TCA 90 bp TTGAACATCAATATGATGCTCAAAAGACATGCTCATCAGAGCATTTTGGGTTTTCAGGAGATGAAGTCATaGGGAAGGGACAAGAGACAC +
Preference number: 2 (lower is better)
Translates to: LNINMMLKRHAHQSILGFQEMKS*GRDKRH
Trigger: GTGTCTCTTGTCCCTTCCTCATGACTTCATCTCCTG...AAAACCCAAAATGCTCTGATGAGCATGTCTTTTGAGCATCATATTGATGTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR-3UTR TCA 90 bp TTGAACATCAATATGATGCTCAAAAGACATGCTCATCAGAGCATTTTGGGTTTTGGACCACTGAAGTTGTaGACAAAGATGGCAGCAGAG +
Preference number: 2 (lower is better)
Translates to: LNINMMLKRHAHQSILGFGPLKL*TKMAAE
Trigger: CTCTGCTGCCATCTTTGTTCACAACTTCAGTGGTCC...AAAACCCAAAATGCTCTGATGAGCATGTCTTTTGAGCATCATATTGATGTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR-3UTR TCA 90 bp TTGAACATCAATATGATGCTCAAAAGACATGCTCATCAGAGCATTTTGGGTTTTACGCTCAACAAATCATaGCAATCCCAGCAGCCACAG +
Preference number: 2 (lower is better)
Translates to: LNINMMLKRHAHQSILGFTLNKS*QSQQPQ
Trigger: CTGTGGCTGCTGGGATTGTCATGATTTGTTGAGCGT...AAAACCCAAAATGCTCTGATGAGCATGTCTTTTGAGCATCATATTGATGTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR-3UTR GCA 90 bp CACCAGTTAATTACAAAAAGCATGCATATTTATCCTCACAGTGAGTTAAGTGGTGTGTTATCTGCAGGCTaGTGTGTTGATGCAGAGCTG +
Preference number: 2 (lower is better)
Translates to: HQLITKSMHIYPHSELSGVLSAG*CVDAEL
Trigger: CAGCTCTGCATCAACACAGCAGCCTGCAGATAACAC...ACCACTTAACTCACTGTGAGGATAAATATGCATGCTTTTTGTAATTAACTGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR GCA 90 bp TCAAGTAGTTTCAGCTCCAAACTACAACTGTATAAAATAGTACTCCCACCCCAAAAGAAGGTGATAAACTaGTGGTGCTCCTTGGATTGG +
Preference number: 2 (lower is better)
Translates to: SSSFSSKLQLYKIVLPPQKKVIN*WCSLDW
Trigger: CCAATCCAAGGAGCACCAGCAGTTTATCACCTTCTT...TTGGGGTGGGAGTACTATTTTATACAGTTGTAGTTTGGAGCTGAAACTACTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR-3UTR TCA 90 bp GCTAGCAAATCATACATTGCATTCCCCAAAGCATCTGAACGTACTTCTAGAAAATGGCACTTGTTTATATaGGCAAAAGCCTTCAACACC +
Preference number: 2 (lower is better)
Translates to: ASKSYIAFPKASERTSRKWHLFI*AKAFNT
Trigger: GGTGTTGAAGGCTTTTGCTCATATAAACAAGTGCCA...TTTTCTAGAAGTACGTTCAGATGCTTTGGGGAATGCAATGTATGATTTGCTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR CCA 90 bp CACCAGTTAATTACAAAAAGCATGCATATTTATCCTCACAGTGAGTTAAGTGGTGTGTTGATGCAGAGCTaGGAAGATCACAGATCCATG +
Preference number: 2 (lower is better)
Translates to: HQLITKSMHIYPHSELSGVLMQS*EDHRSM
Trigger: CATGGATCTGTGATCTTCCCAGCTCTGCATCAACAC...ACCACTTAACTCACTGTGAGGATAAATATGCATGCTTTTTGTAATTAACTGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR CCA 90 bp TTGAACATCAATATGATGCTCAAAAGACATGCTCATCAGAGCATTTTGGGTTTTCCCTTGGAAACTGTTTaGTGGTATCTACCAAAGCCG +
Preference number: 2 (lower is better)
Translates to: LNINMMLKRHAHQSILGFPLETV*WYLPKP
Trigger: CGGCTTTGGTAGATACCACCAAACAGTTTCCAAGGG...AAAACCCAAAATGCTCTGATGAGCATGTCTTTTGAGCATCATATTGATGTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR-3UTR TCA 90 bp TCAAGTAGTTTCAGCTCCAAACTACAACTGTATAAAATAGTACTCCCACCCCAAAAAGCAGCTGTGAACTaGAAACAACCCAAATATCCA +
Preference number: 2 (lower is better)
Translates to: SSSFSSKLQLYKIVLPPQKAAVN*KQPKYP
Trigger: TGGATATTTGGGTTGTTTTCAGTTCACAGCTGCTTT...TTGGGGTGGGAGTACTATTTTATACAGTTGTAGTTTGGAGCTGAAACTACTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR-3UTR GCA 90 bp CACCATTTCTATAAAACACTGATGAACATCTCACAGAGCACTCATATTACATGGAATAATTATGCTCCCTaGTCACAAAAGGCACCTACC +
Preference number: 2 (lower is better)
Translates to: HHFYKTLMNISQSTHITWNNYAP*SQKAPT
Trigger: GGTAGGTGCCTTTTGTGAGCAGGGAGCATAATTATT...CCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGTTTTATAGAAATGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR TCA 90 bp TTAATACCTTCCATCAAGACATTTCAGAGCTCTAGACGTTTAGAAATAAGGTCAAGTGATACCTGGGTGTaGTATATATCAGTCCACTCA +
Preference number: 2 (lower is better)
Translates to: LIPSIKTFQSSRRLEIRSSDTWV*YISVHS
Trigger: TGAGTGGACTGATATATATCACACCCAGGTATCACT...TGACCTTATTTCTAAACGTCTAGAGCTCTGAAATGTCTTGATGGAAGGTATTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR GCA 90 bp CACCAGTTAATTACAAAAAGCATGCATATTTATCCTCACAGTGAGTTAAGTGGTAGTACACAATCTGTGTaGAGTACAGAAAGCCCTCAT +
Preference number: 2 (lower is better)
Translates to: HQLITKSMHIYPHSELSGSTQSV*STESPH
Trigger: ATGAGGGCTTTCTGTACTGCACACAGATTGTGTACT...ACCACTTAACTCACTGTGAGGATAAATATGCATGCTTTTTGTAATTAACTGGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR CCA 90 bp TTAATACCTTCCATCAAGACATTTCAGAGCTCTAGACGTTTAGAAATAAGGTCAAGGAGAAAAAGGTCCTaGTGTCAAAATAGTTTGGGC +
Preference number: 2 (lower is better)
Translates to: LIPSIKTFQSSRRLEIRSRRKRS*CQNSLG
Trigger: GCCCAAACTATTTTGACACCAGGACCTTTTTCTCCT...TGACCTTATTTCTAAACGTCTAGAGCTCTGAAATGTCTTGATGGAAGGTATTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR TCA 90 bp CACCATTTCTATAAAACACTGATGAACATCTCACAGAGCACTCATATTACATGGTATTTGCTGGTCATTTaGAACTCAATGGCACTTGTT +
Preference number: 2 (lower is better)
Translates to: HHFYKTLMNISQSTHITWYLLVI*NSMALV
Trigger: AACAAGTGCCATTGAGTTTCAAATGACCAGCAAATA...CCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGTTTTATAGAAATGGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR TCA 90 bp TTGAACATCAATATGATGCTCAAAAGACATGCTCATCAGAGCATTTTGGGTTTTTGTTCAAAGCAGCTGTaGACTGAAAACAACCCAAAT +
Preference number: 2 (lower is better)
Translates to: LNINMMLKRHAHQSILGFCSKQL*TENNPN
Trigger: ATTTGGGTTGTTTTCAGTTCACAGCTGCTTTGAACA...AAAACCCAAAATGCTCTGATGAGCATGTCTTTTGAGCATCATATTGATGTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR-3UTR CCA 90 bp CACCATTTCTATAAAACACTGATGAACATCTCACAGAGCACTCATATTACATGGAAACTGCTATTTGGTTaGAGGATTTCCAAGAAACAG +
Preference number: 2 (lower is better)
Translates to: HHFYKTLMNISQSTHITWKLLFG*RISKKQ
Trigger: CTGTTTCTTGGAAATCCTCCAACCAAATAGCAGTTT...CCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGTTTTATAGAAATGGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR CCA 90 bp TTAATACCTTCCATCAAGACATTTCAGAGCTCTAGACGTTTAGAAATAAGGTCATTGTTTAACCTTATGTaGAAGCCATCACTGTTGGAA +
Preference number: 2 (lower is better)
Translates to: LIPSIKTFQSSRRLEIRSLFNLM*KPSLLE
Trigger: TTCCAACAGTGATGGCTTCCACATAAGGTTAAACAA...TGACCTTATTTCTAAACGTCTAGAGCTCTGAAATGTCTTGATGGAAGGTATTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR GCA 72 bp TGCAGCACCTATTCCCTGCCTCCCCTAAATGGCCTTTaGCCACAGTCCAGCACTGTGGGGAATGATGGCCAC +
Preference number: 3 (lower is better)
Translates to: CSTYSLPPLNGL*PQSSTVGNDGH
Trigger: GTGGCCATCATTCCCCACAGTGCTGGACTGTGGGCAAAGGCCATTTAGGGGAGGCAGGGAATAGGTGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR CCA 72 bp AGATCACTTCGGGACAGGGCAGGCCTGACCCTGCGATaGCACCTTCAACTCTTGAGCCAGAAGCTGGTACCT +
Preference number: 3 (lower is better)
Translates to: RSLRDRAGLTLR*HLQLLSQKLVP
Trigger: AGGTACCAGCTTCTGGCTCAAGAGTTGAAGGTGCCATCGCAGGGTCAGGCCTGCCCTGTCCCGAAGTGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR TCA 72 bp TGCTTAGGTTGGCAAAGCAGCAGCTCTTTGCAGCAATaGCAGGCAGGGCAGAGTGTCGACTGGGAAGCGAGT +
Preference number: 3 (lower is better)
Translates to: CLGWQSSSSLQQ*QAGQSVDWEAS
Trigger: ACTCGCTTCCCAGTCGACACTCTGCCCTGCCTGTCATTGCTGCAAAGAGCTGCTGCTTTGCCAACCTAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR GCA 72 bp CAGTCACCTGGACTGGGGTGCAGTACACAATCTGTGTaGAGTACAGAAAGCCCTCATCAGCTGTGGCCAGAG +
Preference number: 3 (lower is better)
Translates to: QSPGLGCSTQSV*STESPHQLWPE
Trigger: CTCTGGCCACAGCTGATGAGGGCTTTCTGTACTGCACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR CCA 72 bp TTGTGCACGGCACAACTCGAGTGGGTACCAGTCACCTaGACTGGGGTGCAGTACACAATCTGTGTGCAGTAC +
Preference number: 3 (lower is better)
Translates to: LCTAQLEWVPVT*TGVQYTICVQY
Trigger: GTACTGCACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGTACCCACTCGAGTTGTGCCGTGCACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR CCA 72 bp CATATACTGGACAGGTTGTGCACGGCACAACTCGAGTaGGTACCAGTCACCTGGACTGGGGTGCAGTACACA +
Preference number: 3 (lower is better)
Translates to: HILDRLCTAQLE*VPVTWTGVQYT
Trigger: TGTGTACTGCACCCCAGTCCAGGTGACTGGTACCCACTCGAGTTGTGCCGTGCACAACCTGTCCAGTATATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR CCA 72 bp GCCGAGAGGCTCTCACTGTACCTACCCAAAACACACTaGTTCGGTCAAGCCCCTCTGGAGTGTGAAAGCAAG +
Preference number: 3 (lower is better)
Translates to: AERLSLYLPKTH*FGQAPLECESK
Trigger: CTTGCTTTCACACTCCAGAGGGGCTTGACCGAACCAGTGTGTTTTGGGTAGGTACAGTGAGAGCCTCTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR CCA 72 bp CCGCTCCTAAGACCAGGCCCTCCATGGTTTGAAGCCTaGGCTCAACAGTCACTCAAGTCTGCAGAAAGACCA +
Preference number: 3 (lower is better)
Translates to: PLLRPGPPWFEA*AQQSLKSAERP
Trigger: TGGTCTTTCTGCAGACTTGAGTGACTGTTGAGCCCAGGCTTCAAACCATGGAGGGCCTGGTCTTAGGAGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR-3UTR CAA 90 bp GGCAAGTGGACAGAGGACTTTCTCTGGAGAGCCAGTAACGTGAGAAGATGGCCATCCCCTAAATGGCCTTaGCCCACAGTCCAGCACTGT +
Preference number: 3 (lower is better)
Translates to: GKWTEDFLWRASNVRRWPSPKWP*PTVQHC
Trigger: ACAGTGCTGGACTGTGGGCAAAGGCCATTTAGGGGA...TGGCCATCTTCTCACGTTACTGGCTCTCCAGAGAAAGTCCTCTGTCCACTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR GCA 72 bp CACAACTCGAGTGGGTACCAGTCACCTGGACTGGGGTaGAGTACACAATCTGTGTGCAGTACAGAAAGCCCT +
Preference number: 3 (lower is better)
Translates to: HNSSGYQSPGLG*STQSVCSTESP
Trigger: AGGGCTTTCTGTACTGCACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGTACCCACTCGAGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR GCA 72 bp CATCAGCACTACATGAAAGCGGCCCCCTGCCCCTCATaGAGAGAATCTCTGCTGGAAACAACTGCTGGCTTT +
Preference number: 3 (lower is better)
Translates to: HQHYMKAAPCPS*RESLLETTAGF
Trigger: AAAGCCAGCAGTTGTTTCCAGCAGAGATTCTCTGCATGAGGGGCAGGGGGCCGCTTTCATGTAGTGCTGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR CCA 72 bp CACGGCACAACTCGAGTGGGTACCAGTCACCTGGACTaGGGTGCAGTACACAATCTGTGTGCAGTACAGAAA +
Preference number: 3 (lower is better)
Translates to: HGTTRVGTSHLD*GAVHNLCAVQK
Trigger: TTTCTGTACTGCACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGTACCCACTCGAGTTGTGCCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR CCA 72 bp CCATTACCAGTCAGTAGGGCCACCACATGCATATACTaGACAGGTTGTGCACGGCACAACTCGAGTGGGTAC +
Preference number: 3 (lower is better)
Translates to: PLPVSRATTCIY*TGCARHNSSGY
Trigger: GTACCCACTCGAGTTGTGCCGTGCACAACCTGTCCAGTATATGCATGTGGTGGCCCTACTGACTGGTAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR CCA 72 bp GAGGACTTTCTCTGGAGAGCCAGTAACGTGAGAAGATaGCCACTCACATCAGCACTACATGAAAGCGGCCCC +
Preference number: 3 (lower is better)
Translates to: EDFLWRASNVRR*PLTSALHESGP
Trigger: GGGGCCGCTTTCATGTAGTGCTGATGTGAGTGGCCATCTTCTCACGTTACTGGCTCTCCAGAGAAAGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR TCA 72 bp AAAATAGCCGCTCCTAAGACCAGGCCCTCCATGGTTTaGAGCCTGGGCTCAACAGTCACTCAAGTCTGCAGA +
Preference number: 3 (lower is better)
Translates to: KIAAPKTRPSMV*SLGSTVTQVCR
Trigger: TCTGCAGACTTGAGTGACTGTTGAGCCCAGGCTTCAAACCATGGAGGGCCTGGTCTTAGGAGCGGCTATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR-3UTR CAA 90 bp GGGTACCAGTCACCTGGACTGGGGTGCAGTACACAATCTGTGTGCAGTACAGAATCTCATGACCTTCATTaGCCAGCAGTGCCACACGTT +
Preference number: 3 (lower is better)
Translates to: GYQSPGLGCSTQSVCSTESHDLH*PAVPHV
Trigger: AACGTGTGGCACTGCTGGCAAATGAAGGTCATGAGA...TTCTGTACTGCACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGTACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR CAA 90 bp TTGCAGATACTCAGGTTCTGGAACAGGACCACTGAAGTTGTGAACAAAGATGGCCAGGCCCTCCATGGTTaGAAGCCTGGGCTCAACAGT +
Preference number: 3 (lower is better)
Translates to: LQILRFWNRTTEVVNKDGQALHG*KPGLNS
Trigger: ACTGTTGAGCCCAGGCTTCAAACCATGGAGGGCCTG...GCCATCTTTGTTCACAACTTCAGTGGTCCTGTTCCAGAACCTGAGTATCTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR CCA 72 bp AGCTGTACCTGTGAGAGGCAGGTATTACCTGAGGGGTaGACGAGGTACAGACATAAAACAGGAAGGGTTCTA +
Preference number: 3 (lower is better)
Translates to: SCTCERQVLPEG*TRYRHKTGRVL
Trigger: TAGAACCCTTCCTGTTTTATGTCTGTACCTCGTCCACCCCTCAGGTAATACCTGCCTCTCACAGGTACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR CCA 72 bp AAGCGGCCCCCTGCCCCTCATGCAGAGAATCTCTGCTaGAAACAACTGCTGGCTTTCAAACACATTCTTTAT +
Preference number: 3 (lower is better)
Translates to: KRPPAPHAENLC*KQLLAFKHILY
Trigger: ATAAAGAATGTGTTTGAAAGCCAGCAGTTGTTTCCAGCAGAGATTCTCTGCATGAGGGGCAGGGGGCCGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR-3UTR CAA 90 bp AGAGAAGCCGTATTTTCTTTGCTTAGGTTGGCAAAGCAGCAGCTCTTTGCAGCACATATACTGGACAGGTaGTGCACGGCACAACTCGAG +
Preference number: 3 (lower is better)
Translates to: REAVFSLLRLAKQQLFAAHILDR*CTAQLE
Trigger: CTCGAGTTGTGCCGTGCACAACCTGTCCAGTATATG...TGCTGCAAAGAGCTGCTGCTTTGCCAACCTAAGCAAAGAAAATACGGCTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR GCA 72 bp GGGCTTCACCTTCAACATAGCCCAACCCATCCTACATaGCCCGTTCCCAAAAATGCCTTTATCATTAAGCCA +
Preference number: 3 (lower is better)
Translates to: GLHLQHSPTHPT*PVPKNAFIIKP
Trigger: TGGCTTAATGATAAAGGCATTTTTGGGAACGGGGCATGTAGGATGGGTTGGGCTATGTTGAAGGTGAAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR TCA 72 bp GAAAGCACAGGCCTCGAGGTTAGGAAACAAGAATTCTaGTCCCGAGATTACCCATTAATTAGCAGTGTGACC +
Preference number: 3 (lower is better)
Translates to: ESTGLEVRKQEF*SRDYPLISSVT
Trigger: GGTCACACTGCTAATTAATGGGTAATCTCGGGATCAGAATTCTTGTTTCCTAACCTCGAGGCCTGTGCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR GCA 72 bp ACGCCACACTGGACGTTACAAAATGCATGCATATTCTaGCCCAGTGCTATCTGTTCATTACCGTTTTGTCTC +
Preference number: 3 (lower is better)
Translates to: TPHWTLQNACIF*PSAICSLPFCL
Trigger: GAGACAAAACGGTAATGAACAGATAGCACTGGGGCAGAATATGCATGCATTTTGTAACGTCCAGTGTGGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR GCA 72 bp TGCCTCATGAGGGGTGCAGGTGTAGGTAAACAGGTATaGACCTGTGTATTTCATAAAAGGATGGTGAAAGTC +
Preference number: 3 (lower is better)
Translates to: CLMRGAGVGKQV*TCVFHKRMVKV
Trigger: GACTTTCACCATCCTTTTATGAAATACACAGGTGCATACCTGTTTACCTACACCTGCACCCCTCATGAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR-3UTR CAA 90 bp TTCCAGAAGGAAGACTCGAAGCCATCTCAGTTAACAGTTCTACACATTTCCCACAAGCGAGTCCCAATCTaGAATAATGGTGAGCTTGAG +
Preference number: 3 (lower is better)
Translates to: FQKEDSKPSQLTVLHISHKRVPI*NNGELE
Trigger: CTCAAGCTCACCATTATTCAAGATTGGGACTCGCTT...GTGGGAAATGTGTAGAACTGTTAACTGAGATGGCTTCGAGTCTTCCTTCTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR GCA 72 bp GATGAACATCTCACAGAGCACTCATATTACATGGAGTaGTATGGGAAATGCTTTTCCCCATCCAGGTTACTG +
Preference number: 3 (lower is better)
Translates to: DEHLTEHSYYME*YGKCFSPSRLL
Trigger: CAGTAACCTGGATGGGGAAAAGCATTTCCCATAGCACTCCATGTAATATGAGTGCTCTGTGAGATGTTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR GCA 72 bp ATCTATTCAACGCCACACTGGACGTTACAAAATGCATaGATATTCTGCCCCAGTGCTATCTGTTCATTACCG +
Preference number: 3 (lower is better)
Translates to: IYSTPHWTLQNA*IFCPSAICSLP
Trigger: CGGTAATGAACAGATAGCACTGGGGCAGAATATGCATGCATTTTGTAACGTCCAGTGTGGCGTTGAATAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR CCA 72 bp ACACTGATGAACATCTCACAGAGCACTCATATTACATaGAGTGCTATGGGAAATGCTTTTCCCCATCCAGGT +
Preference number: 3 (lower is better)
Translates to: TLMNISQSTHIT*SAMGNAFPHPG
Trigger: ACCTGGATGGGGAAAAGCATTTCCCATAGCACTCCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR CCA 72 bp AGTACAAGTAGGTATAATCCCTTGGAAACTGTTTGGTaGTATCTACCAAAGCCGAATATACCCAGAGCCTAC +
Preference number: 3 (lower is better)
Translates to: STSRYNPLETVW*YLPKPNIPRAY
Trigger: GTAGGCTCTGGGTATATTCGGCTTTGGTAGATACCACCAAACAGTTTCCAAGGGATTATACCTACTTGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR-3UTR CAA 90 bp CACCAGTTAATTACAAAAAGCATGCATATTTATCCTCACAGTGAGTTAAGTGGTGGAGGGAGAAGGCACTaGTCTTCCAGGAGATCACTT +
Preference number: 3 (lower is better)
Translates to: HQLITKSMHIYPHSELSGGGRRH*SSRRSL
Trigger: AAGTGATCTCCTGGAAGACAAGTGCCTTCTCCCTCC...ACCACTTAACTCACTGTGAGGATAAATATGCATGCTTTTTGTAATTAACTGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR CAA 90 bp AGAGAAGCCGTATTTTCTTTGCTTAGGTTGGCAAAGCAGCAGCTCTTTGCAGCAAAAACTGCTATTTGGTaGGAGGATTTCCAAGAAACA +
Preference number: 3 (lower is better)
Translates to: REAVFSLLRLAKQQLFAAKTAIW*EDFQET
Trigger: TGTTTCTTGGAAATCCTCCAACCAAATAGCAGTTTT...TGCTGCAAAGAGCTGCTGCTTTGCCAACCTAAGCAAAGAAAATACGGCTTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR GCA 72 bp CTTTCTGTTCTGGTTATTAGGTATTTGTGCAACTTTTaGAGATACTCAGGTTCTGGAACAGGACCACTGAAG +
Preference number: 3 (lower is better)
Translates to: LSVLVIRYLCNF*RYSGSGTGPLK
Trigger: CTTCAGTGGTCCTGTTCCAGAACCTGAGTATCTGCAAAAGTTGCACAAATACCTAATAACCAGAACAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR-3UTR CAA 90 bp TTAATACCTTCCATCAAGACATTTCAGAGCTCTAGACGTTTAGAAATAAGGTCATCTACGGATTATGAGTaGCGAATAGAGGCTGAGGTC +
Preference number: 3 (lower is better)
Translates to: LIPSIKTFQSSRRLEIRSSTDYE*RIEAEV
Trigger: GACCTCAGCCTCTATTCGCAACTCATAATCCGTAGA...TGACCTTATTTCTAAACGTCTAGAGCTCTGAAATGTCTTGATGGAAGGTATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR TCA 72 bp TCTGACAGCAAAGGACAGCACAGTGATACCTGGGTGTaGTATATATCAGTCCACTCAATTTATAAAGCACTT +
Preference number: 3 (lower is better)
Translates to: SDSKGQHSDTWV*YISVHSIYKAL
Trigger: AAGTGCTTTATAAATTGAGTGGACTGATATATATCACACCCAGGTATCACTGTGCTGTCCTTTGCTGTCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR CAA 90 bp CACCATTTCTATAAAACACTGATGAACATCTCACAGAGCACTCATATTACATGGAGACTAGTGAAATGTTaGCTTCCCCAGATAAGGAAC +
Preference number: 3 (lower is better)
Translates to: HHFYKTLMNISQSTHITWRLVKC*LPQIRN
Trigger: GTTCCTTATCTGGGGAAGCAAACATTTCACTAGTCT...CCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGTTTTATAGAAATGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR-3UTR CAA 90 bp TTAATACCTTCCATCAAGACATTTCAGAGCTCTAGACGTTTAGAAATAAGGTCAGAAGCCGTATTTTCTTaGCTTAGGTTGGCAAAGCAG +
Preference number: 3 (lower is better)
Translates to: LIPSIKTFQSSRRLEIRSEAVFS*LRLAKQ
Trigger: CTGCTTTGCCAACCTAAGCAAAGAAAATACGGCTTC...TGACCTTATTTCTAAACGTCTAGAGCTCTGAAATGTCTTGATGGAAGGTATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp GTGCACGGCACAACTCGAGTGGGTACCAGTCACCTGGACTGGGGTGCAGTACACTCCAGCTTCGGCTGCTaGAGAAGCCCGCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: VHGTTRVGTSHLDWGAVHSSFGC*RSPHFQ
Trigger: CTGGAAGTGCGGGCTTCTGCAGCAGCCGAAGCTGGA...GTGTACTGCACCCCAGTCCAGGTGACTGGTACCCACTCGAGTTGTGCCGTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp TCACATCAGCACTACATGAAAGCGGCCCCCTGCCCCTCATGCAGAGAATCTCTGCAGGGGAGCCGCTGCTaGCTGCCCTGGCAGTTCGCA +
Preference number: 4 (lower is better)
Translates to: SHQHYMKAAPCPSCRESLQGSRC*LPWQFA
Trigger: TGCGAACTGCCAGGGCAGGCAGCAGCGGCTCCCCTG...CAGAGATTCTCTGCATGAGGGGCAGGGGGCCGCTTTCATGTAGTGCTGATGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp GTGCACGGCACAACTCGAGTGGGTACCAGTCACCTGGACTGGGGTGCAGTACACGCTGATCAGGTTAGGTaGGGTGCTAGTGGGACCCCC +
Preference number: 4 (lower is better)
Translates to: VHGTTRVGTSHLDWGAVHADQVR*GASGTP
Trigger: GGGGGTCCCACTAGCACCCCACCTAACCTGATCAGC...GTGTACTGCACCCCAGTCCAGGTGACTGGTACCCACTCGAGTTGTGCCGTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR TCA 90 bp GTGCACGGCACAACTCGAGTGGGTACCAGTCACCTGGACTGGGGTGCAGTACACAGCTCTTTGCAGCAATaGCAGGCAGGGCAGAGTGTC +
Preference number: 4 (lower is better)
Translates to: VHGTTRVGTSHLDWGAVHSSLQQ*QAGQSV
Trigger: GACACTCTGCCCTGCCTGTCATTGCTGCAAAGAGCT...GTGTACTGCACCCCAGTCCAGGTGACTGGTACCCACTCGAGTTGTGCCGTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp GGGGTGCAGTACACAATCTGTGTGCAGTACAGAAAGCCCTCATCAGCTGTGGCCGAAGGTAGCACAGGCTaGCCGCCTTCCGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: GVQYTICVQYRKPSSAVAEGSTG*PPSAPA
Trigger: AGCTGGTGCGGAAGGCGGCCAGCCTGTGCTACCTTC...GGCCACAGCTGATGAGGGCTTTCTGTACTGCACACAGATTGTGTACTGCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp GTGCACGGCACAACTCGAGTGGGTACCAGTCACCTGGACTGGGGTGCAGTACACTCACCTGGACTGGGGTaGAGTACACAATCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: VHGTTRVGTSHLDWGAVHSPGLG*STQSVC
Trigger: GCACACAGATTGTGTACTGCACCCCAGTCCAGGTGA...GTGTACTGCACCCCAGTCCAGGTGACTGGTACCCACTCGAGTTGTGCCGTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp CCGCTCCTAAGACCAGGCCCTCCATGGTTTGAAGCCTGGGCTCAACAGTCACTCATGAAAGCGGCCCCCTaGCCCTCATGCAGAGAATCT +
Preference number: 4 (lower is better)
Translates to: PLLRPGPPWFEAWAQQSLMKAAP*PSCRES
Trigger: AGATTCTCTGCATGAGGGGCAGGGGGCCGCTTTCAT...GAGTGACTGTTGAGCCCAGGCTTCAAACCATGGAGGGCCTGGTCTTAGGAGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp TATTCCCTGCCTCCCCTAAATGGCCTTTGCCCACAGTCCAGCACTGTGGGGAATCGCACCAGCTGCTCCTaGCTGATCAGGTTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: YSLPPLNGLCPQSSTVGNRTSCS*LIRLGG
Trigger: CCCACCTAACCTGATCAGCCAGGAGCAGCTGGTGCG...ATTCCCCACAGTGCTGGACTGTGGGCAAAGGCCATTTAGGGGAGGCAGGGAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR TCA 90 bp GGCAAGTGGACAGAGGACTTTCTCTGGAGAGCCAGTAACGTGAGAAGATGGCCACACATCAGCACTACATaGAAGCGGCCCCCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: GKWTEDFLWRASNVRRWPHISTT*KRPPAP
Trigger: AGGGGCAGGGGGCCGCTTTCATGTAGTGCTGATGTG...TGGCCATCTTCTCACGTTACTGGCTCTCCAGAGAAAGTCCTCTGTCCACTTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR TCA 90 bp CCGCTCCTAAGACCAGGCCCTCCATGGTTTGAAGCCTGGGCTCAACAGTCACTCGGAGAGCCAGTAACGTaGGAAGATGGCCACTCACAT +
Preference number: 4 (lower is better)
Translates to: PLLRPGPPWFEAWAQQSLGEPVT*EDGHSH
Trigger: ATGTGAGTGGCCATCTTCTCACGTTACTGGCTCTCC...GAGTGACTGTTGAGCCCAGGCTTCAAACCATGGAGGGCCTGGTCTTAGGAGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp GGGTACCAGTCACCTGGACTGGGGTGCAGTACACAATCTGTGTGCAGTACAGAAAGCTCCAGCTTCGGCTaGTGCAGAAGCCCGCACTTC +
Preference number: 4 (lower is better)
Translates to: GYQSPGLGCSTQSVCSTESSSFG*CRSPHF
Trigger: GAAGTGCGGGCTTCTGCAGCAGCCGAAGCTGGAGCT...TTCTGTACTGCACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGTACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp CCGCTCCTAAGACCAGGCCCTCCATGGTTTGAAGCCTGGGCTCAACAGTCACTCACGGCTTTTGATTGCTaGTGGGCAGAACCATCAGGG +
Preference number: 4 (lower is better)
Translates to: PLLRPGPPWFEAWAQQSLTAFDC*WAEPSG
Trigger: CCCTGATGGTTCTGCCCAGCAGCAATCAAAAGCCGT...GAGTGACTGTTGAGCCCAGGCTTCAAACCATGGAGGGCCTGGTCTTAGGAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp TCAGCACTACATGAAAGCGGCCCCCTGCCCCTCATGCAGAGAATCTCTGCTGGACCCCTAAATGGCCTTTaGCCACAGTCCAGCACTGTG +
Preference number: 4 (lower is better)
Translates to: SALHESGPLPLMQRISAGPLNGL*PQSSTV
Trigger: CACAGTGCTGGACTGTGGGCAAAGGCCATTTAGGGG...TCCAGCAGAGATTCTCTGCATGAGGGGCAGGGGGCCGCTTTCATGTAGTGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp GGGTACCAGTCACCTGGACTGGGGTGCAGTACACAATCTGTGTGCAGTACAGAACGCACCAGCTGCTCCTaGCTGATCAGGTTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GYQSPGLGCSTQSVCSTERTSCS*LIRLGG
Trigger: CCCACCTAACCTGATCAGCCAGGAGCAGCTGGTGCG...TTCTGTACTGCACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGTACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR CAA 72 bp CTGGGAAGATCACAGATCCATGGAGGGAGAAGGCACTaGTCTTCCAGGAGATCACTTCGGGACAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LGRSQIHGGRRH*SSRRSLRDRAG
Trigger: GCCTGCCCTGTCCCGAAGTGATCTCCTGGAAGACAAGTGCCTTCTCCCTCCATGGATCTGTGATCTTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR TCA 90 bp GTGCACGGCACAACTCGAGTGGGTACCAGTCACCTGGACTGGGGTGCAGTACACACGGGATACTGGGGTTaGAAAATTTGTCCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: VHGTTRVGTSHLDWGAVHTGYWG*KICPSS
Trigger: AGAGCTGGGACAAATTTTTCAACCCCAGTATCCCGT...GTGTACTGCACCCCAGTCCAGGTGACTGGTACCCACTCGAGTTGTGCCGTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR TCA 90 bp CCCCTGCCCCTCATGCAGAGAATCTCTGCTGGAAACAACTGCTGGCTTTCAAACAGGCCCTCCATGGTTTaGAGCCTGGGCTCAACAGTC +
Preference number: 4 (lower is better)
Translates to: PLPLMQRISAGNNCWLSNRPSMV*SLGSTV
Trigger: GACTGTTGAGCCCAGGCTTCAAACCATGGAGGGCCT...GTTTGAAAGCCAGCAGTTGTTTCCAGCAGAGATTCTCTGCATGAGGGGCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp GGGTACCAGTCACCTGGACTGGGGTGCAGTACACAATCTGTGTGCAGTACAGAAGCCTTCCGCACCAGCTaGTCCTGGCTGATCAGGTTA +
Preference number: 4 (lower is better)
Translates to: GYQSPGLGCSTQSVCSTEAFRTS*SWLIRL
Trigger: TAACCTGATCAGCCAGGAGCAGCTGGTGCGGAAGGC...TTCTGTACTGCACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGTACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp ACCCAGTGGTACACAGATGATTGTACATCAGTGGAACCAGAGAAAGCACAGGCCGAAGGTAGCACAGGCTaGCCGCCTTCCGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: TQWYTDDCTSVEPEKAQAEGSTG*PPSAPA
Trigger: AGCTGGTGCGGAAGGCGGCCAGCCTGTGCTACCTTC...GGCCTGTGCTTTCTCTGGTTCCACTGATGTACAATCATCTGTGTACCACTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR CAA 72 bp AGGGCAGGCCTGACCCTGCGATGGCACCTTCAACTCTaGAGCCAGAAGCTGGTACCTACAAGGAACTCATCT +
Preference number: 4 (lower is better)
Translates to: RAGLTLRWHLQL*SQKLVPTRNSS
Trigger: AGATGAGTTCCTTGTAGGTACCAGCTTCTGGCTCAAGAGTTGAAGGTGCCATCGCAGGGTCAGGCCTGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR TCA 90 bp GGGGTGCAGTACACAATCTGTGTGCAGTACAGAAAGCCCTCATCAGCTGTGGCCCGAGCCTTCGTCGTATaGAGAAGCCCCCAAGCTTAT +
Preference number: 4 (lower is better)
Translates to: GVQYTICVQYRKPSSAVARAFVV*RSPQAY
Trigger: ATAAGCTTGGGGGCTTCTTCATACGACGAAGGCTCG...GGCCACAGCTGATGAGGGCTTTCTGTACTGCACACAGATTGTGTACTGCACCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR TCA 90 bp TCAGCACTACATGAAAGCGGCCCCCTGCCCCTCATGCAGAGAATCTCTGCTGGAGGACCACTGAAGTTGTaGACAAAGATGGCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: SALHESGPLPLMQRISAGGPLKL*TKMAAE
Trigger: CTCTGCTGCCATCTTTGTTCACAACTTCAGTGGTCC...TCCAGCAGAGATTCTCTGCATGAGGGGCAGGGGGCCGCTTTCATGTAGTGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR TCA 90 bp TCACATCAGCACTACATGAAAGCGGCCCCCTGCCCCTCATGCAGAGAATCTCTGGAGGGACAGCAAGAGTaGCTCAAAAAGAGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SHQHYMKAAPCPSCRESLEGQQE*LKKSSQ
Trigger: CTGGCTGCTCTTTTTGAGTCACTCTTGCTGTCCCTC...CAGAGATTCTCTGCATGAGGGGCAGGGGGCCGCTTTCATGTAGTGCTGATGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp AGAGAAGCCGTATTTTCTTTGCTTAGGTTGGCAAAGCAGCAGCTCTTTGCAGCACAGGGGAGCCGCTGCTaGCCTAGCAGCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: REAVFSLLRLAKQQLFAAQGSRC*PSSSSF
Trigger: GAAGCTGGAGCTGCTAGGGCAGCAGCGGCTCCCCTG...TGCTGCAAAGAGCTGCTGCTTTGCCAACCTAAGCAAAGAAAATACGGCTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp GGGGTGCAGTACACAATCTGTGTGCAGTACAGAAAGCCCTCATCAGCTGTGGCCGTAAGAAAGGCGTCTTaGAAGCCATCCGCGGTGTCT +
Preference number: 4 (lower is better)
Translates to: GVQYTICVQYRKPSSAVAVRKAS*KPSAVS
Trigger: AGACACCGCGGATGGCTTGCAAGACGCCTTTCTTAC...GGCCACAGCTGATGAGGGCTTTCTGTACTGCACACAGATTGTGTACTGCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp GTGCACGGCACAACTCGAGTGGGTACCAGTCACCTGGACTGGGGTGCAGTACACGTATTACCTGAGGGGTaGACGAGGTACAGACATAAA +
Preference number: 4 (lower is better)
Translates to: VHGTTRVGTSHLDWGAVHVLPEG*TRYRHK
Trigger: TTTATGTCTGTACCTCGTCCACCCCTCAGGTAATAC...GTGTACTGCACCCCAGTCCAGGTGACTGGTACCCACTCGAGTTGTGCCGTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp GGGGTGCAGTACACAATCTGTGTGCAGTACAGAAAGCCCTCATCAGCTGTGGCCACCAGTCACCTGGACTaGGGTGCAGTACACAATCTG +
Preference number: 4 (lower is better)
Translates to: GVQYTICVQYRKPSSAVATSHLD*GAVHNL
Trigger: CAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGT...GGCCACAGCTGATGAGGGCTTTCTGTACTGCACACAGATTGTGTACTGCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp GGGTACCAGTCACCTGGACTGGGGTGCAGTACACAATCTGTGTGCAGTACAGAATGGGTACCAGTCACCTaGACTGGGGTGCAGTACACA +
Preference number: 4 (lower is better)
Translates to: GYQSPGLGCSTQSVCSTEWVPVT*TGVQYT
Trigger: TGTGTACTGCACCCCAGTCCAGGTGACTGGTACCCA...TTCTGTACTGCACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGTACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp GGGTACCAGTCACCTGGACTGGGGTGCAGTACACAATCTGTGTGCAGTACAGAAACGGCACAACTCGAGTaGGTACCAGTCACCTGGACT +
Preference number: 4 (lower is better)
Translates to: GYQSPGLGCSTQSVCSTETAQLE*VPVTWT
Trigger: AGTCCAGGTGACTGGTACCCACTCGAGTTGTGCCGT...TTCTGTACTGCACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGTACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp GGGTACCAGTCACCTGGACTGGGGTGCAGTACACAATCTGTGTGCAGTACAGAAGGGCAGAGTGTCGACTaGGAAGCGAGTCCCAATCTT +
Preference number: 4 (lower is better)
Translates to: GYQSPGLGCSTQSVCSTEGQSVD*EASPNL
Trigger: AAGATTGGGACTCGCTTCCCAGTCGACACTCTGCCC...TTCTGTACTGCACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGTACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp TCACATCAGCACTACATGAAAGCGGCCCCCTGCCCCTCATGCAGAGAATCTCTGACTGCTGGTGCTCCTTaGATTGGCTCACCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: SHQHYMKAAPCPSCRESLTAGAP*IGSPEC
Trigger: ACACTCAGGTGAGCCAATCCAAGGAGCACCAGCAGT...CAGAGATTCTCTGCATGAGGGGCAGGGGGCCGCTTTCATGTAGTGCTGATGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR TCA 90 bp CCCCTGCCCCTCATGCAGAGAATCTCTGCTGGAAACAACTGCTGGCTTTCAAACCGAGCCTTCGTCGTATaGAGAAGCCCCCAAGCTTAT +
Preference number: 4 (lower is better)
Translates to: PLPLMQRISAGNNCWLSNRAFVV*RSPQAY
Trigger: ATAAGCTTGGGGGCTTCTTCATACGACGAAGGCTCG...GTTTGAAAGCCAGCAGTTGTTTCCAGCAGAGATTCTCTGCATGAGGGGCAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR TCA 90 bp GGGGTGCAGTACACAATCTGTGTGCAGTACAGAAAGCCCTCATCAGCTGTGGCCGGACCACTGAAGTTGTaGACAAAGATGGCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: GVQYTICVQYRKPSSAVAGPLKL*TKMAAE
Trigger: CTCTGCTGCCATCTTTGTTCACAACTTCAGTGGTCC...GGCCACAGCTGATGAGGGCTTTCTGTACTGCACACAGATTGTGTACTGCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR TCA 90 bp GTGCACGGCACAACTCGAGTGGGTACCAGTCACCTGGACTGGGGTGCAGTACACAGTGATACCTGGGTGTaGTATATATCAGTCCACTCA +
Preference number: 4 (lower is better)
Translates to: VHGTTRVGTSHLDWGAVHSDTWV*YISVHS
Trigger: TGAGTGGACTGATATATATCACACCCAGGTATCACT...GTGTACTGCACCCCAGTCCAGGTGACTGGTACCCACTCGAGTTGTGCCGTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR TCA 90 bp TATTCCCTGCCTCCCCTAAATGGCCTTTGCCCACAGTCCAGCACTGTGGGGAATACGCTCAACAAATCATaGCAATCCCAGCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: YSLPPLNGLCPQSSTVGNTLNKS*QSQQPQ
Trigger: CTGTGGCTGCTGGGATTGTCATGATTTGTTGAGCGT...ATTCCCCACAGTGCTGGACTGTGGGCAAAGGCCATTTAGGGGAGGCAGGGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp CCGCTCCTAAGACCAGGCCCTCCATGGTTTGAAGCCTGGGCTCAACAGTCACTCTTCAGCAGCCACTTCTaGAATTGCCTCTTGTACTCT +
Preference number: 4 (lower is better)
Translates to: PLLRPGPPWFEAWAQQSLFSSHF*NCLLYS
Trigger: AGAGTACAAGAGGCAATTGCAGAAGTGGCTGCTGAA...GAGTGACTGTTGAGCCCAGGCTTCAAACCATGGAGGGCCTGGTCTTAGGAGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp ACCCAGTGGTACACAGATGATTGTACATCAGTGGAACCAGAGAAAGCACAGGCCGCCTTCCGCACCAGCTaGTCCTGGCTGATCAGGTTA +
Preference number: 4 (lower is better)
Translates to: TQWYTDDCTSVEPEKAQAAFRTS*SWLIRL
Trigger: TAACCTGATCAGCCAGGAGCAGCTGGTGCGGAAGGC...GGCCTGTGCTTTCTCTGGTTCCACTGATGTACAATCATCTGTGTACCACTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp TCAGCACTACATGAAAGCGGCCCCCTGCCCCTCATGCAGAGAATCTCTGCTGGATCTTCCTGGTCATCGTaGTCTGCCACTGTAAGAATG +
Preference number: 4 (lower is better)
Translates to: SALHESGPLPLMQRISAGSSWSS*SATVRM
Trigger: CATTCTTACAGTGGCAGAGCACGATGACCAGGAAGA...TCCAGCAGAGATTCTCTGCATGAGGGGCAGGGGGCCGCTTTCATGTAGTGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp GGGGTGCAGTACACAATCTGTGTGCAGTACAGAAAGCCCTCATCAGCTGTGGCCGTGATAAACTGCTGGTaGTCCTTGGATTGGCTCACC +
Preference number: 4 (lower is better)
Translates to: GVQYTICVQYRKPSSAVAVINCW*SLDWLT
Trigger: GGTGAGCCAATCCAAGGAGCACCAGCAGTTTATCAC...GGCCACAGCTGATGAGGGCTTTCTGTACTGCACACAGATTGTGTACTGCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp TCACATCAGCACTACATGAAAGCGGCCCCCTGCCCCTCATGCAGAGAATCTCTGGTGATAAACTGCTGGTaGTCCTTGGATTGGCTCACC +
Preference number: 4 (lower is better)
Translates to: SHQHYMKAAPCPSCRESLVINCW*SLDWLT
Trigger: GGTGAGCCAATCCAAGGAGCACCAGCAGTTTATCAC...CAGAGATTCTCTGCATGAGGGGCAGGGGGCCGCTTTCATGTAGTGCTGATGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp TCAGCACTACATGAAAGCGGCCCCCTGCCCCTCATGCAGAGAATCTCTGCTGGACATGCAGAGAATCTCTaGTGGAAACAACTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SALHESGPLPLMQRISAGHAENL*WKQLLA
Trigger: AGCCAGCAGTTGTTTCCAGCAGAGATTCTCTGCATG...TCCAGCAGAGATTCTCTGCATGAGGGGCAGGGGGCCGCTTTCATGTAGTGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp TCAGCACTACATGAAAGCGGCCCCCTGCCCCTCATGCAGAGAATCTCTGCTGGAATCTTTCCGTCCATCTaGTGTTTCATCGAGCCTTCG +
Preference number: 4 (lower is better)
Translates to: SALHESGPLPLMQRISAGIFPSI*CFIEPS
Trigger: CGAAGGCTCGATGAAACACCAGATGGACGGAAAGAT...TCCAGCAGAGATTCTCTGCATGAGGGGCAGGGGGCCGCTTTCATGTAGTGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp TCAGCACTACATGAAAGCGGCCCCCTGCCCCTCATGCAGAGAATCTCTGCTGGAAGTTGTGAACAAAGATaGCAGCAGAGCTGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: SALHESGPLPLMQRISAGSCEQR*QQSCRP
Trigger: AGGCCTACAGCTCTGCTGCCATCTTTGTTCACAACT...TCCAGCAGAGATTCTCTGCATGAGGGGCAGGGGGCCGCTTTCATGTAGTGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp GGCAAGTGGACAGAGGACTTTCTCTGGAGAGCCAGTAACGTGAGAAGATGGCCACTACCCAAAACACACTaGTTCGGTCAAGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: GKWTEDFLWRASNVRRWPLPKTH*FGQAPL
Trigger: CAGAGGGGCTTGACCGAACCAGTGTGTTTTGGGTAG...TGGCCATCTTCTCACGTTACTGGCTCTCCAGAGAAAGTCCTCTGTCCACTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp ACACAAGGCAAGTGGACAGAGGACTTTCTCTGGAGAGCCAGTAACGTGAGAAGACCTGCCTCCCCTAAATaGCCTTTGCCCACAGTCCAG +
Preference number: 4 (lower is better)
Translates to: TQGKWTEDFLWRASNVRRPASPK*PLPTVQ
Trigger: CTGGACTGTGGGCAAAGGCCATTTAGGGGAGGCAGG...TCTTCTCACGTTACTGGCTCTCCAGAGAAAGTCCTCTGTCCACTTGCCTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp TCACATCAGCACTACATGAAAGCGGCCCCCTGCCCCTCATGCAGAGAATCTCTGCCATGGTTTGAAGCCTaGGCTCAACAGTCACTCAAG +
Preference number: 4 (lower is better)
Translates to: SHQHYMKAAPCPSCRESLPWFEA*AQQSLK
Trigger: CTTGAGTGACTGTTGAGCCCAGGCTTCAAACCATGG...CAGAGATTCTCTGCATGAGGGGCAGGGGGCCGCTTTCATGTAGTGCTGATGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR TCA 90 bp ACCTACCCAAAACACACTGGTTCGGTCAAGCCCCTCTGGAGTGTGAAAGCAAGATGTCTGGCAAGGCAGTaGGATGGTGCCTTCATTGGA +
Preference number: 4 (lower is better)
Translates to: TYPKHTGSVKPLWSVKARCLARQ*DGAFIG
Trigger: TCCAATGAAGGCACCATCTCACTGCCTTGCCAGACA...TCTTGCTTTCACACTCCAGAGGGGCTTGACCGAACCAGTGTGTTTTGGGTAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR TCA 90 bp TCACATCAGCACTACATGAAAGCGGCCCCCTGCCCCTCATGCAGAGAATCTCTGCTGGAACAGGACCACTaGAGTTGTGAACAAAGATGG +
Preference number: 4 (lower is better)
Translates to: SHQHYMKAAPCPSCRESLLEQDH*SCEQRW
Trigger: CCATCTTTGTTCACAACTTCAGTGGTCCTGTTCCAG...CAGAGATTCTCTGCATGAGGGGCAGGGGGCCGCTTTCATGTAGTGCTGATGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR TCA 90 bp GGGTACCAGTCACCTGGACTGGGGTGCAGTACACAATCTGTGTGCAGTACAGAAACCACAGTCTTCCCCTaGAGAAGGGCATGCATTTCA +
Preference number: 4 (lower is better)
Translates to: GYQSPGLGCSTQSVCSTETTVFP*RRACIS
Trigger: TGAAATGCATGCCCTTCTTCAGGGGAAGACTGTGGT...TTCTGTACTGCACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGTACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR TCA 90 bp ACCTACCCAAAACACACTGGTTCGGTCAAGCCCCTCTGGAGTGTGAAAGCAAGACACCAGGACTCCAGCTaGTCTCACTGCAGCATAAAC +
Preference number: 4 (lower is better)
Translates to: TYPKHTGSVKPLWSVKARHQDSS*SHCSIN
Trigger: GTTTATGCTGCAGTGAGATCAGCTGGAGTCCTGGTG...TCTTGCTTTCACACTCCAGAGGGGCTTGACCGAACCAGTGTGTTTTGGGTAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp CCGCTCCTAAGACCAGGCCCTCCATGGTTTGAAGCCTGGGCTCAACAGTCACTCCCTCTTGTACTCTACTaGTGTTCAGCACATTTTCAG +
Preference number: 4 (lower is better)
Translates to: PLLRPGPPWFEAWAQQSLPLVLY*CSAHFQ
Trigger: CTGAAAATGTGCTGAACAGCAGTAGAGTACAAGAGG...GAGTGACTGTTGAGCCCAGGCTTCAAACCATGGAGGGCCTGGTCTTAGGAGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp GGGGTGCAGTACACAATCTGTGTGCAGTACAGAAAGCCCTCATCAGCTGTGGCCCTGGTCATCGTGCTCTaGCACTGTAAGAATGCCATA +
Preference number: 4 (lower is better)
Translates to: GVQYTICVQYRKPSSAVALVIVL*HCKNAI
Trigger: TATGGCATTCTTACAGTGGCAGAGCACGATGACCAG...GGCCACAGCTGATGAGGGCTTTCTGTACTGCACACAGATTGTGTACTGCACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp GGGTACCAGTCACCTGGACTGGGGTGCAGTACACAATCTGTGTGCAGTACAGAATTCTTGTCCCACTGCTaGTCAGCAAGACTAGGACTG +
Preference number: 4 (lower is better)
Translates to: GYQSPGLGCSTQSVCSTEFLSHC*SARLGL
Trigger: CAGTCCTAGTCTTGCTGAGCAGCAGTGGGACAAGAA...TTCTGTACTGCACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGTACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp GGCAAGTGGACAGAGGACTTTCTCTGGAGAGCCAGTAACGTGAGAAGATGGCCATTCTTGTCCCACTGCTaGTCAGCAAGACTAGGACTG +
Preference number: 4 (lower is better)
Translates to: GKWTEDFLWRASNVRRWPFLSHC*SARLGL
Trigger: CAGTCCTAGTCTTGCTGAGCAGCAGTGGGACAAGAA...TGGCCATCTTCTCACGTTACTGGCTCTCCAGAGAAAGTCCTCTGTCCACTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp ACCTACCCAAAACACACTGGTTCGGTCAAGCCCCTCTGGAGTGTGAAAGCAAGACCAACCCATCCTACATaGCCCGTTCCCAAAAATGCC +
Preference number: 4 (lower is better)
Translates to: TYPKHTGSVKPLWSVKARPTHPT*PVPKNA
Trigger: GGCATTTTTGGGAACGGGGCATGTAGGATGGGTTGG...TCTTGCTTTCACACTCCAGAGGGGCTTGACCGAACCAGTGTGTTTTGGGTAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp GGGGTGCAGTACACAATCTGTGTGCAGTACAGAAAGCCCTCATCAGCTGTGGCCGCTTTTGATTGCTGCTaGGCAGAACCATCAGGGTTT +
Preference number: 4 (lower is better)
Translates to: GVQYTICVQYRKPSSAVAAFDCC*AEPSGF
Trigger: AAACCCTGATGGTTCTGCCCAGCAGCAATCAAAAGC...GGCCACAGCTGATGAGGGCTTTCTGTACTGCACACAGATTGTGTACTGCACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp TATTCCCTGCCTCCCCTAAATGGCCTTTGCCCACAGTCCAGCACTGTGGGGAATGCTTTTGATTGCTGCTaGGCAGAACCATCAGGGTTT +
Preference number: 4 (lower is better)
Translates to: YSLPPLNGLCPQSSTVGNAFDCC*AEPSGF
Trigger: AAACCCTGATGGTTCTGCCCAGCAGCAATCAAAAGC...ATTCCCCACAGTGCTGGACTGTGGGCAAAGGCCATTTAGGGGAGGCAGGGAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp GGGGTGCAGTACACAATCTGTGTGCAGTACAGAAAGCCCTCATCAGCTGTGGCCAAGGTGATAAACTGCTaGTGCTCCTTGGATTGGCTC +
Preference number: 4 (lower is better)
Translates to: GVQYTICVQYRKPSSAVAKVINC*CSLDWL
Trigger: GAGCCAATCCAAGGAGCACCAGCAGTTTATCACCTT...GGCCACAGCTGATGAGGGCTTTCTGTACTGCACACAGATTGTGTACTGCACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp GTGCACGGCACAACTCGAGTGGGTACCAGTCACCTGGACTGGGGTGCAGTACACTCACAAGACAATATGTaGCACTCTCAGCATATACTG +
Preference number: 4 (lower is better)
Translates to: VHGTTRVGTSHLDWGAVHSQDNM*HSQHIL
Trigger: CAGTATATGCTGAGAGTGCCACATATTGTCTTGTGA...GTGTACTGCACCCCAGTCCAGGTGACTGGTACCCACTCGAGTTGTGCCGTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp GGGGTGCAGTACACAATCTGTGTGCAGTACAGAAAGCCCTCATCAGCTGTGGCCAGCCCTCATCAGCTGTaGCCAGAGAACTGTATTCTA +
Preference number: 4 (lower is better)
Translates to: GVQYTICVQYRKPSSAVASPHQL*PENCIL
Trigger: TAGAATACAGTTCTCTGGCCACAGCTGATGAGGGCT...GGCCACAGCTGATGAGGGCTTTCTGTACTGCACACAGATTGTGTACTGCACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp TATTCCCTGCCTCCCCTAAATGGCCTTTGCCCACAGTCCAGCACTGTGGGGAATCCCTTGGAAACTGTTTaGTGGTATCTACCAAAGCCG +
Preference number: 4 (lower is better)
Translates to: YSLPPLNGLCPQSSTVGNPLETV*WYLPKP
Trigger: CGGCTTTGGTAGATACCACCAAACAGTTTCCAAGGG...ATTCCCCACAGTGCTGGACTGTGGGCAAAGGCCATTTAGGGGAGGCAGGGAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp CCGCTCCTAAGACCAGGCCCTCCATGGTTTGAAGCCTGGGCTCAACAGTCACTCTCACAAGACAATATGTaGCACTCTCAGCTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: PLLRPGPPWFEAWAQQSLSQDNM*HSQLKR
Trigger: TCTCTTCAGCTGAGAGTGCCACATATTGTCTTGTGA...GAGTGACTGTTGAGCCCAGGCTTCAAACCATGGAGGGCCTGGTCTTAGGAGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp CCGCTCCTAAGACCAGGCCCTCCATGGTTTGAAGCCTGGGCTCAACAGTCACTCGAGCATTTTGGGTTTTaGATTAGAGACGCTCAACCT +
Preference number: 4 (lower is better)
Translates to: PLLRPGPPWFEAWAQQSLEHFGF*IRDAQP
Trigger: AGGTTGAGCGTCTCTAATCCAAAACCCAAAATGCTC...GAGTGACTGTTGAGCCCAGGCTTCAAACCATGGAGGGCCTGGTCTTAGGAGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR TCA 90 bp CCCCTGCCCCTCATGCAGAGAATCTCTGCTGGAAACAACTGCTGGCTTTCAAACTTTGTTAACGGCTTTTaGTTGCTGCTGGGCAGAACC +
Preference number: 4 (lower is better)
Translates to: PLPLMQRISAGNNCWLSNFVNGF*LLLGRT
Trigger: GGTTCTGCCCAGCAGCAATCAAAAGCCGTTAACAAA...GTTTGAAAGCCAGCAGTTGTTTCCAGCAGAGATTCTCTGCATGAGGGGCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR TCA 90 bp CCGCTCCTAAGACCAGGCCCTCCATGGTTTGAAGCCTGGGCTCAACAGTCACTCTCAATATGGGATCTATaGACTGGTAGAAACAGAAGC +
Preference number: 4 (lower is better)
Translates to: PLLRPGPPWFEAWAQQSLSIWDL*TGRNRS
Trigger: GCTTCTGTTTCTACCAGTTCATAGATCCCATATTGA...GAGTGACTGTTGAGCCCAGGCTTCAAACCATGGAGGGCCTGGTCTTAGGAGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR TCA 90 bp ACCAATGGGAGACCACCAAGATTATCTCACTCCTTCTGCAGCACCTATTCCCTGGTTGAGTTCGAAGACTaGTGGGACAGTTGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: TNGRPPRLSHSFCSTYSLVEFED*WDSCAG
Trigger: CCCAGCACAACTGTCCCATCAGTCTTCGAACTCAAC...CAGGGAATAGGTGCTGCAGAAGGAGTGAGATAATCTTGGTGGTCTCCCATTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR TCA 90 bp GGGTACCAGTCACCTGGACTGGGGTGCAGTACACAATCTGTGTGCAGTACAGAACTGGAACAGGACCACTaGAGTTGTGAACAAAGATGG +
Preference number: 4 (lower is better)
Translates to: GYQSPGLGCSTQSVCSTELEQDH*SCEQRW
Trigger: CCATCTTTGTTCACAACTTCAGTGGTCCTGTTCCAG...TTCTGTACTGCACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGTACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR TCA 90 bp GGGGTGCAGTACACAATCTGTGTGCAGTACAGAAAGCCCTCATCAGCTGTGGCCAAGGAACTCATCTCATaGCCTTCATTTGCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: GVQYTICVQYRKPSSAVAKELIS*PSFASS
Trigger: ACTGCTGGCAAATGAAGGTCATGAGATGAGTTCCTT...GGCCACAGCTGATGAGGGCTTTCTGTACTGCACACAGATTGTGTACTGCACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR TCA 90 bp AGAGAAGCCGTATTTTCTTTGCTTAGGTTGGCAAAGCAGCAGCTCTTTGCAGCAGAGGCAGGTATTACCTaGGGGGTGGACGAGGTACAG +
Preference number: 4 (lower is better)
Translates to: REAVFSLLRLAKQQLFAAEAGIT*GVDEVQ
Trigger: CTGTACCTCGTCCACCCCTCAGGTAATACCTGCCTC...TGCTGCAAAGAGCTGCTGCTTTGCCAACCTAAGCAAAGAAAATACGGCTTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR TCA 90 bp ACCTACCCAAAACACACTGGTTCGGTCAAGCCCCTCTGGAGTGTGAAAGCAAGACAGGAGATGAAGTCATaGGGAAGGGACAAGAGACAC +
Preference number: 4 (lower is better)
Translates to: TYPKHTGSVKPLWSVKARQEMKS*GRDKRH
Trigger: GTGTCTCTTGTCCCTTCCTCATGACTTCATCTCCTG...TCTTGCTTTCACACTCCAGAGGGGCTTGACCGAACCAGTGTGTTTTGGGTAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR TCA 90 bp CCGCTCCTAAGACCAGGCCCTCCATGGTTTGAAGCCTGGGCTCAACAGTCACTCTTTCCAGGACTGTTGTaGGAATCAAATGAGATAGTG +
Preference number: 4 (lower is better)
Translates to: PLLRPGPPWFEAWAQQSLFPGLL*ESNEIV
Trigger: CACTATCTCATTTGATTCTCACAACAGTCCTGGAAA...GAGTGACTGTTGAGCCCAGGCTTCAAACCATGGAGGGCCTGGTCTTAGGAGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp GGGGTGCAGTACACAATCTGTGTGCAGTACAGAAAGCCCTCATCAGCTGTGGCCGCTATCAGTTTCGGGTaGAGAATGTCCATACAACAG +
Preference number: 4 (lower is better)
Translates to: GVQYTICVQYRKPSSAVAAISFG*RMSIQQ
Trigger: CTGTTGTATGGACATTCTGCACCCGAAACTGATAGC...GGCCACAGCTGATGAGGGCTTTCTGTACTGCACACAGATTGTGTACTGCACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp TATTCCCTGCCTCCCCTAAATGGCCTTTGCCCACAGTCCAGCACTGTGGGGAATCATTCCTCACTTGTGTaGTTACATCGACCAACACTG +
Preference number: 4 (lower is better)
Translates to: YSLPPLNGLCPQSSTVGNHSSLV*LHRPTL
Trigger: CAGTGTTGGTCGATGTAAGCACACAAGTGAGGAATG...ATTCCCCACAGTGCTGGACTGTGGGCAAAGGCCATTTAGGGGAGGCAGGGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp ACCCAGTGGTACACAGATGATTGTACATCAGTGGAACCAGAGAAAGCACAGGCCCCCAGCTCTGGGGAGTaGAGGAGTAACAACATCTTC +
Preference number: 4 (lower is better)
Translates to: TQWYTDDCTSVEPEKAQAPSSGE*RSNNIF
Trigger: GAAGATGTTGTTACTCCTGCACTCCCCAGAGCTGGG...GGCCTGTGCTTTCTCTGGTTCCACTGATGTACAATCATCTGTGTACCACTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp GGGGTGCAGTACACAATCTGTGTGCAGTACAGAAAGCCCTCATCAGCTGTGGCCCATGCATTTTCAGAGTaGACAACTTCCCTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: GVQYTICVQYRKPSSAVAHAFSE*TTSLLS
Trigger: AGAGAGGAGGGAAGTTGTGCACTCTGAAAATGCATG...GGCCACAGCTGATGAGGGCTTTCTGTACTGCACACAGATTGTGTACTGCACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp TTGCAGATACTCAGGTTCTGGAACAGGACCACTGAAGTTGTGAACAAAGATGGCGCCCCCTGCCCCTCATaGAGAGAATCTCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LQILRFWNRTTEVVNKDGAPCPS*RESLLE
Trigger: TTCCAGCAGAGATTCTCTGCATGAGGGGCAGGGGGC...GCCATCTTTGTTCACAACTTCAGTGGTCCTGTTCCAGAACCTGAGTATCTGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp GGGGTGCAGTACACAATCTGTGTGCAGTACAGAAAGCCCTCATCAGCTGTGGCCTTGCCGGTGAGACAGTaGCAACCATTTCTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: GVQYTICVQYRKPSSAVALPVRQ*QPFLEE
Trigger: TTCTTCAAGAAATGGTTGCCACTGTCTCACCGGCAA...GGCCACAGCTGATGAGGGCTTTCTGTACTGCACACAGATTGTGTACTGCACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp TCACATCAGCACTACATGAAAGCGGCCCCCTGCCCCTCATGCAGAGAATCTCTGTTGCCGGTGAGACAGTaGCAACCATTTCTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: SHQHYMKAAPCPSCRESLLPVRQ*QPFLEE
Trigger: TTCTTCAAGAAATGGTTGCCACTGTCTCACCGGCAA...CAGAGATTCTCTGCATGAGGGGCAGGGGGCCGCTTTCATGTAGTGCTGATGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp CCGCTCCTAAGACCAGGCCCTCCATGGTTTGAAGCCTGGGCTCAACAGTCACTCGGTGCTTTGATGTTATaGCAGAAGAGAATGAAAGTG +
Preference number: 4 (lower is better)
Translates to: PLLRPGPPWFEAWAQQSLGALML*QKRMKV
Trigger: CACTTTCATTCTCTTCTGCCATAACATCAAAGCACC...GAGTGACTGTTGAGCCCAGGCTTCAAACCATGGAGGGCCTGGTCTTAGGAGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp CCCCTGCCCCTCATGCAGAGAATCTCTGCTGGAAACAACTGCTGGCTTTCAAACAGTCTTCGACCAATGTaGAGAGATCAATTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: PLPLMQRISAGNNCWLSNSLRPM*RDQFPA
Trigger: GGCAGGGAATTGATCTCTCCACATTGGTCGAAGACT...GTTTGAAAGCCAGCAGTTGTTTCCAGCAGAGATTCTCTGCATGAGGGGCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp AGAGAAGCCGTATTTTCTTTGCTTAGGTTGGCAAAGCAGCAGCTCTTTGCAGCAGGCCTGACCCTGCGATaGCACCTTCAACTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: REAVFSLLRLAKQQLFAAGLTLR*HLQLLS
Trigger: GCTCAAGAGTTGAAGGTGCCATCGCAGGGTCAGGCC...TGCTGCAAAGAGCTGCTGCTTTGCCAACCTAAGCAAAGAAAATACGGCTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp ACCTACCCAAAACACACTGGTTCGGTCAAGCCCCTCTGGAGTGTGAAAGCAAGAGAGCAGCCAGGTCAGTaGCAGCTCAATAGCAAAACT +
Preference number: 4 (lower is better)
Translates to: TYPKHTGSVKPLWSVKAREQPGQ*QLNSKT
Trigger: AGTTTTGCTATTGAGCTGCCACTGACCTGGCTGCTC...TCTTGCTTTCACACTCCAGAGGGGCTTGACCGAACCAGTGTGTTTTGGGTAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp TTGCAGATACTCAGGTTCTGGAACAGGACCACTGAAGTTGTGAACAAAGATGGCGACGGCGGTGCTTTATaGCCGAGAGGCTCTCACTGT +
Preference number: 4 (lower is better)
Translates to: LQILRFWNRTTEVVNKDGDGGAL*PRGSHC
Trigger: ACAGTGAGAGCCTCTCGGCCATAAAGCACCGCCGTC...GCCATCTTTGTTCACAACTTCAGTGGTCCTGTTCCAGAACCTGAGTATCTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR TCA 90 bp ACCAATGGGAGACCACCAAGATTATCTCACTCCTTCTGCAGCACCTATTCCCTGTCTGATCATTGCCGGTaGGACAGTGGCAACCATTTC +
Preference number: 4 (lower is better)
Translates to: TNGRPPRLSHSFCSTYSLSDHCR*DSGNHF
Trigger: GAAATGGTTGCCACTGTCTCACCGGCAATGATCAGA...CAGGGAATAGGTGCTGCAGAAGGAGTGAGATAATCTTGGTGGTCTCCCATTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR TCA 90 bp GGCAAGTGGACAGAGGACTTTCTCTGGAGAGCCAGTAACGTGAGAAGATGGCCATCCAAAAGAAGCTGTTaGACAGTTTTAGCAGCACCC +
Preference number: 4 (lower is better)
Translates to: GKWTEDFLWRASNVRRWPSKRSC*TVLAAP
Trigger: GGGTGCTGCTAAAACTGTTCAACAGCTTCTTTTGGA...TGGCCATCTTCTCACGTTACTGGCTCTCCAGAGAAAGTCCTCTGTCCACTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR TCA 90 bp ACCCAGTGGTACACAGATGATTGTACATCAGTGGAACCAGAGAAAGCACAGGCCAGTATCTACCACAACTaGCAAAAGTCCTGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: TQWYTDDCTSVEPEKAQASIYHN*QKSCPS
Trigger: GCTCGGGCAGGACTTTTGTCAGTTGTGGTAGATACT...GGCCTGTGCTTTCTCTGGTTCCACTGATGTACAATCATCTGTGTACCACTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR TCA 90 bp GGGGTGCAGTACACAATCTGTGTGCAGTACAGAAAGCCCTCATCAGCTGTGGCCGCAGACACCGGTTTCTaGCTTTGGCTTTCTAAATAT +
Preference number: 4 (lower is better)
Translates to: GVQYTICVQYRKPSSAVAADTGF*LWLSKY
Trigger: ATATTTAGAAAGCCAAAGTCAGAAACCGGTGTCTGC...GGCCACAGCTGATGAGGGCTTTCTGTACTGCACACAGATTGTGTACTGCACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR TCA 90 bp TCACATCAGCACTACATGAAAGCGGCCCCCTGCCCCTCATGCAGAGAATCTCTGGCAGACACCGGTTTCTaGCTTTGGCTTTCTAAATAT +
Preference number: 4 (lower is better)
Translates to: SHQHYMKAAPCPSCRESLADTGF*LWLSKY
Trigger: ATATTTAGAAAGCCAAAGTCAGAAACCGGTGTCTGC...CAGAGATTCTCTGCATGAGGGGCAGGGGGCCGCTTTCATGTAGTGCTGATGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR TCA 90 bp GGGGTGCAGTACACAATCTGTGTGCAGTACAGAAAGCCCTCATCAGCTGTGGCCTGGCACTTGTTTATATaGGCAAAAGCCTTCAACACC +
Preference number: 4 (lower is better)
Translates to: GVQYTICVQYRKPSSAVAWHLFI*AKAFNT
Trigger: GGTGTTGAAGGCTTTTGCTCATATAAACAAGTGCCA...GGCCACAGCTGATGAGGGCTTTCTGTACTGCACACAGATTGTGTACTGCACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR TCA 90 bp ACCTACCCAAAACACACTGGTTCGGTCAAGCCCCTCTGGAGTGTGAAAGCAAGATGCAAAAGCAGGAGATaGAGTCATGAGGAAGGGACA +
Preference number: 4 (lower is better)
Translates to: TYPKHTGSVKPLWSVKARCKSRR*SHEEGT
Trigger: TGTCCCTTCCTCATGACTTCATCTCCTGCTTTTGCA...TCTTGCTTTCACACTCCAGAGGGGCTTGACCGAACCAGTGTGTTTTGGGTAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR TCA 90 bp ACCCAGTGGTACACAGATGATTGTACATCAGTGGAACCAGAGAAAGCACAGGCCTTGGATTGGCTCACCTaGGTGTGCAAAAGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: TQWYTDDCTSVEPEKAQALDWLT*VCKSRR
Trigger: TCTCCTGCTTTTGCACACTCAGGTGAGCCAATCCAA...GGCCTGTGCTTTCTCTGGTTCCACTGATGTACAATCATCTGTGTACCACTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp GGGTACCAGTCACCTGGACTGGGGTGCAGTACACAATCTGTGTGCAGTACAGAACATTCCTCACTTGTGTaGTTACATCGACCAACACTG +
Preference number: 4 (lower is better)
Translates to: GYQSPGLGCSTQSVCSTEHSSLV*LHRPTL
Trigger: CAGTGTTGGTCGATGTAAGCACACAAGTGAGGAATG...TTCTGTACTGCACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGTACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp GGCAAGTGGACAGAGGACTTTCTCTGGAGAGCCAGTAACGTGAGAAGATGGCCAAGCCACTTCTGCAATTaGCTCTTGTACTCTACTGCT +
Preference number: 4 (lower is better)
Translates to: GKWTEDFLWRASNVRRWPSHFCN*LLYSTA
Trigger: AGCAGTAGAGTACAAGAGGCAATTGCAGAAGTGGCT...TGGCCATCTTCTCACGTTACTGGCTCTCCAGAGAAAGTCCTCTGTCCACTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp GGGTACCAGTCACCTGGACTGGGGTGCAGTACACAATCTGTGTGCAGTACAGAATTCAGCAGCCACTTCTaGAATTGCCTCTTGTACTCT +
Preference number: 4 (lower is better)
Translates to: GYQSPGLGCSTQSVCSTEFSSHF*NCLLYS
Trigger: AGAGTACAAGAGGCAATTGCAGAAGTGGCTGCTGAA...TTCTGTACTGCACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGTACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp TCAGCACTACATGAAAGCGGCCCCCTGCCCCTCATGCAGAGAATCTCTGCTGGAAGCAGCTGTATGGCATaGATTACTACATCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: SALHESGPLPLMQRISAGSSCMA*ITTSSE
Trigger: TTCAGAAGATGTAGTAATGCATGCCATACAGCTGCT...TCCAGCAGAGATTCTCTGCATGAGGGGCAGGGGGCCGCTTTCATGTAGTGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp TCACATCAGCACTACATGAAAGCGGCCCCCTGCCCCTCATGCAGAGAATCTCTGCCTCTTGTTCAGAACTaGATAAAGGCTGCAAGCTAT +
Preference number: 4 (lower is better)
Translates to: SHQHYMKAAPCPSCRESLPLVQN*IKAASY
Trigger: ATAGCTTGCAGCCTTTATGCAGTTCTGAACAAGAGG...CAGAGATTCTCTGCATGAGGGGCAGGGGGCCGCTTTCATGTAGTGCTGATGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp TCAAGTAGTTTCAGCTCCAAACTACAACTGTATAAAATAGTACTCCCACCCCAACAACAGGGGAGCCGCTaGTGCCTGCCCTGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: SSSFSSKLQLYKIVLPPQQQGSR*CLPWQF
Trigger: GAACTGCCAGGGCAGGCAGCAGCGGCTCCCCTGTTG...TTGGGGTGGGAGTACTATTTTATACAGTTGTAGTTTGGAGCTGAAACTACTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp TATTCCCTGCCTCCCCTAAATGGCCTTTGCCCACAGTCCAGCACTGTGGGGAATTTTCAGTCACATTGGTaGCAAACATGCCCTTATGCA +
Preference number: 4 (lower is better)
Translates to: YSLPPLNGLCPQSSTVGNFQSHW*QTCPYA
Trigger: TGCATAAGGGCATGTTTGCCACCAATGTGACTGAAA...ATTCCCCACAGTGCTGGACTGTGGGCAAAGGCCATTTAGGGGAGGCAGGGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp ACACAAGGCAAGTGGACAGAGGACTTTCTCTGGAGAGCCAGTAACGTGAGAAGAAGATGGTGCCTTCATTaGAGAGAAGGTAGCACAGGC +
Preference number: 4 (lower is better)
Translates to: TQGKWTEDFLWRASNVRRRWCLH*REGSTG
Trigger: GCCTGTGCTACCTTCTCTCCAATGAAGGCACCATCT...TCTTCTCACGTTACTGGCTCTCCAGAGAAAGTCCTCTGTCCACTTGCCTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp GTGCACGGCACAACTCGAGTGGGTACCAGTCACCTGGACTGGGGTGCAGTACACATTTATAAAGCACTTTaGGATAAAAGGTGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: VHGTTRVGTSHLDWGAVHIYKAL*DKRCSH
Trigger: ATGGGAGCACCTTTTATCCCAAAGTGCTTTATAAAT...GTGTACTGCACCCCAGTCCAGGTGACTGGTACCCACTCGAGTTGTGCCGTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp GGGGTGCAGTACACAATCTGTGTGCAGTACAGAAAGCCCTCATCAGCTGTGGCCTTACATGGAGTGCTATaGGAAATGCTTTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: GVQYTICVQYRKPSSAVALHGVL*EMLFPI
Trigger: GATGGGGAAAAGCATTTCCCATAGCACTCCATGTAA...GGCCACAGCTGATGAGGGCTTTCTGTACTGCACACAGATTGTGTACTGCACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp ACCAATGGGAGACCACCAAGATTATCTCACTCCTTCTGCAGCACCTATTCCCTGTCGGTCAAGCCCCTCTaGAGTGTGAAAGCAAGATCA +
Preference number: 4 (lower is better)
Translates to: TNGRPPRLSHSFCSTYSLSVKPL*SVKARS
Trigger: TGATCTTGCTTTCACACTCCAGAGGGGCTTGACCGA...CAGGGAATAGGTGCTGCAGAAGGAGTGAGATAATCTTGGTGGTCTCCCATTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp ACCAATGGGAGACCACCAAGATTATCTCACTCCTTCTGCAGCACCTATTCCCTGGAGACACAAGGCAAGTaGACAGAGGACTTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: TNGRPPRLSHSFCSTYSLETQGK*TEDFLW
Trigger: CCAGAGAAAGTCCTCTGTCCACTTGCCTTGTGTCTC...CAGGGAATAGGTGCTGCAGAAGGAGTGAGATAATCTTGGTGGTCTCCCATTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp TCACATCAGCACTACATGAAAGCGGCCCCCTGCCCCTCATGCAGAGAATCTCTGATGATTGTACATCAGTaGAACCAGAGAAAGCACAGG +
Preference number: 4 (lower is better)
Translates to: SHQHYMKAAPCPSCRESLMIVHQ*NQRKHR
Trigger: CCTGTGCTTTCTCTGGTTCCACTGATGTACAATCAT...CAGAGATTCTCTGCATGAGGGGCAGGGGGCCGCTTTCATGTAGTGCTGATGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR TCA 90 bp ACCCAGTGGTACACAGATGATTGTACATCAGTGGAACCAGAGAAAGCACAGGCCACGGGATACTGGGGTTaGAAAATTTGTCCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: TQWYTDDCTSVEPEKAQATGYWG*KICPSS
Trigger: AGAGCTGGGACAAATTTTTCAACCCCAGTATCCCGT...GGCCTGTGCTTTCTCTGGTTCCACTGATGTACAATCATCTGTGTACCACTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR TCA 90 bp TCACATCAGCACTACATGAAAGCGGCCCCCTGCCCCTCATGCAGAGAATCTCTGGTTGAGATTATTGCCTaGAGCAATGTATGGTGCTTT +
Preference number: 4 (lower is better)
Translates to: SHQHYMKAAPCPSCRESLVEIIA*SNVWCF
Trigger: AAAGCACCATACATTGCTTCAGGCAATAATCTCAAC...CAGAGATTCTCTGCATGAGGGGCAGGGGGCCGCTTTCATGTAGTGCTGATGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR TCA 90 bp TCACATCAGCACTACATGAAAGCGGCCCCCTGCCCCTCATGCAGAGAATCTCTGCAACCTGTAGCACCTTaGAACATATTGATACCAGTT +
Preference number: 4 (lower is better)
Translates to: SHQHYMKAAPCPSCRESLQPVAP*NILIPV
Trigger: AACTGGTATCAATATGTTTCAAGGTGCTACAGGTTG...CAGAGATTCTCTGCATGAGGGGCAGGGGGCCGCTTTCATGTAGTGCTGATGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR TCA 90 bp TATTCCCTGCCTCCCCTAAATGGCCTTTGCCCACAGTCCAGCACTGTGGGGAATAACTTACATTCCCCATaGATCATGAAGGTAAAGGAC +
Preference number: 4 (lower is better)
Translates to: YSLPPLNGLCPQSSTVGNNLHSP*IMKVKD
Trigger: GTCCTTTACCTTCATGATTCATGGGGAATGTAAGTT...ATTCCCCACAGTGCTGGACTGTGGGCAAAGGCCATTTAGGGGAGGCAGGGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp ACACAAGGCAAGTGGACAGAGGACTTTCTCTGGAGAGCCAGTAACGTGAGAAGACATTGGTGGCAAACATaGCCTTATGCACATCTCGCT +
Preference number: 4 (lower is better)
Translates to: TQGKWTEDFLWRASNVRRHWWQT*PYAHLA
Trigger: AGCGAGATGTGCATAAGGGCATGTTTGCCACCAATG...TCTTCTCACGTTACTGGCTCTCCAGAGAAAGTCCTCTGTCCACTTGCCTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp ACCCAGTGGTACACAGATGATTGTACATCAGTGGAACCAGAGAAAGCACAGGCCCTGGTCATCGTGCTCTaGCACTGTAAGAATGCCATA +
Preference number: 4 (lower is better)
Translates to: TQWYTDDCTSVEPEKAQALVIVL*HCKNAI
Trigger: TATGGCATTCTTACAGTGGCAGAGCACGATGACCAG...GGCCTGTGCTTTCTCTGGTTCCACTGATGTACAATCATCTGTGTACCACTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp AGAGAAGCCGTATTTTCTTTGCTTAGGTTGGCAAAGCAGCAGCTCTTTGCAGCAATACTGGACAGGTTGTaGACGGCACAACTCGAGTGG +
Preference number: 4 (lower is better)
Translates to: REAVFSLLRLAKQQLFAAILDRL*TAQLEW
Trigger: CCACTCGAGTTGTGCCGTGCACAACCTGTCCAGTAT...TGCTGCAAAGAGCTGCTGCTTTGCCAACCTAAGCAAAGAAAATACGGCTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp GGGTACCAGTCACCTGGACTGGGGTGCAGTACACAATCTGTGTGCAGTACAGAAACGTTACAAAATGCATaGATATTCTGCCCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: GYQSPGLGCSTQSVCSTETLQNA*IFCPSA
Trigger: AGCACTGGGGCAGAATATGCATGCATTTTGTAACGT...TTCTGTACTGCACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGTACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp ACCAATGGGAGACCACCAAGATTATCTCACTCCTTCTGCAGCACCTATTCCCTGTTATCTCACTCCTTCTaGAGCACCTATTCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: TNGRPPRLSHSFCSTYSLLSHSF*STYSLP
Trigger: AGGCAGGGAATAGGTGCTGCAGAAGGAGTGAGATAA...CAGGGAATAGGTGCTGCAGAAGGAGTGAGATAATCTTGGTGGTCTCCCATTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp TCACATCAGCACTACATGAAAGCGGCCCCCTGCCCCTCATGCAGAGAATCTCTGTCCCAAATCATGTGCTaGGATGAAAGTTCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: SHQHYMKAAPCPSCRESLSQIMC*DESSSV
Trigger: AACAGAAGAACTTTCATCCCAGCACATGATTTGGGA...CAGAGATTCTCTGCATGAGGGGCAGGGGGCCGCTTTCATGTAGTGCTGATGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp GGGGTGCAGTACACAATCTGTGTGCAGTACAGAAAGCCCTCATCAGCTGTGGCCGGTGCTTTGATGTTATaGCAGAAGAGAATGAAAGTG +
Preference number: 4 (lower is better)
Translates to: GVQYTICVQYRKPSSAVAGALML*QKRMKV
Trigger: CACTTTCATTCTCTTCTGCCATAACATCAAAGCACC...GGCCACAGCTGATGAGGGCTTTCTGTACTGCACACAGATTGTGTACTGCACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp GGCAAGTGGACAGAGGACTTTCTCTGGAGAGCCAGTAACGTGAGAAGATGGCCATTCCCAGCAGCTGTATaGCATGCATTACTACATCTT +
Preference number: 4 (lower is better)
Translates to: GKWTEDFLWRASNVRRWPFPAAV*HALLHL
Trigger: AAGATGTAGTAATGCATGCCATACAGCTGCTGGGAA...TGGCCATCTTCTCACGTTACTGGCTCTCCAGAGAAAGTCCTCTGTCCACTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp GGCAAGTGGACAGAGGACTTTCTCTGGAGAGCCAGTAACGTGAGAAGATGGCCATCGTTCCTGCTAGTGTaGGTGATTGTGACACAATTT +
Preference number: 4 (lower is better)
Translates to: GKWTEDFLWRASNVRRWPSFLLV*VIVTQF
Trigger: AAATTGTGTCACAATCACCCACACTAGCAGGAACGA...TGGCCATCTTCTCACGTTACTGGCTCTCCAGAGAAAGTCCTCTGTCCACTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp GGGTACCAGTCACCTGGACTGGGGTGCAGTACACAATCTGTGTGCAGTACAGAATATTCAACGCCACACTaGACGTTACAAAATGCATGC +
Preference number: 4 (lower is better)
Translates to: GYQSPGLGCSTQSVCSTEYSTPH*TLQNAC
Trigger: GCATGCATTTTGTAACGTCCAGTGTGGCGTTGAATA...TTCTGTACTGCACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGTACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp GGGTACCAGTCACCTGGACTGGGGTGCAGTACACAATCTGTGTGCAGTACAGAAAAAAGCCAGGATCATTaGGGCTGTTCTCTCTATCAA +
Preference number: 4 (lower is better)
Translates to: GYQSPGLGCSTQSVCSTEKSQDH*GCSLYQ
Trigger: TTGATAGAGAGAACAGCCCCAATGATCCTGGCTTTT...TTCTGTACTGCACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGTACCC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp ACCTACCCAAAACACACTGGTTCGGTCAAGCCCCTCTGGAGTGTGAAAGCAAGAAGTAACGTGAGAAGATaGCCACTCACATCAGCACTA +
Preference number: 4 (lower is better)
Translates to: TYPKHTGSVKPLWSVKARSNVRR*PLTSAL
Trigger: TAGTGCTGATGTGAGTGGCCATCTTCTCACGTTACT...TCTTGCTTTCACACTCCAGAGGGGCTTGACCGAACCAGTGTGTTTTGGGTAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR TCA 90 bp GGGTACCAGTCACCTGGACTGGGGTGCAGTACACAATCTGTGTGCAGTACAGAAGTGGCAACCATTTCTTaGAGAATCCTTTTAGCTTTC +
Preference number: 4 (lower is better)
Translates to: GYQSPGLGCSTQSVCSTEVATIS*RILLAF
Trigger: GAAAGCTAAAAGGATTCTTCAAGAAATGGTTGCCAC...TTCTGTACTGCACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGTACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR TCA 90 bp AGAGAAGCCGTATTTTCTTTGCTTAGGTTGGCAAAGCAGCAGCTCTTTGCAGCATCTGATCATTGCCGGTaGGACAGTGGCAACCATTTC +
Preference number: 4 (lower is better)
Translates to: REAVFSLLRLAKQQLFAASDHCR*DSGNHF
Trigger: GAAATGGTTGCCACTGTCTCACCGGCAATGATCAGA...TGCTGCAAAGAGCTGCTGCTTTGCCAACCTAAGCAAAGAAAATACGGCTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR TCA 90 bp GGGTACCAGTCACCTGGACTGGGGTGCAGTACACAATCTGTGTGCAGTACAGAATCAATATGGGATCTATaGACTGGTAGAAACAGAAGC +
Preference number: 4 (lower is better)
Translates to: GYQSPGLGCSTQSVCSTESIWDL*TGRNRS
Trigger: GCTTCTGTTTCTACCAGTTCATAGATCCCATATTGA...TTCTGTACTGCACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGTACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR TCA 90 bp GGCAAGTGGACAGAGGACTTTCTCTGGAGAGCCAGTAACGTGAGAAGATGGCCACAATGTATGGTGCTTTaGTGTTATGGCAGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: GKWTEDFLWRASNVRRWPQCMVL*CYGRRE
Trigger: TTCTCTTCTGCCATAACATCAAAGCACCATACATTG...TGGCCATCTTCTCACGTTACTGGCTCTCCAGAGAAAGTCCTCTGTCCACTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR TCA 90 bp GGGTACCAGTCACCTGGACTGGGGTGCAGTACACAATCTGTGTGCAGTACAGAAGTTGAGATTATTGCCTaGAGCAATGTATGGTGCTTT +
Preference number: 4 (lower is better)
Translates to: GYQSPGLGCSTQSVCSTEVEIIA*SNVWCF
Trigger: AAAGCACCATACATTGCTTCAGGCAATAATCTCAAC...TTCTGTACTGCACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGTACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR TCA 90 bp AGAGAAGCCGTATTTTCTTTGCTTAGGTTGGCAAAGCAGCAGCTCTTTGCAGCAAGTATCTACCACAACTaGCAAAAGTCCTGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: REAVFSLLRLAKQQLFAASIYHN*QKSCPS
Trigger: GCTCGGGCAGGACTTTTGTCAGTTGTGGTAGATACT...TGCTGCAAAGAGCTGCTGCTTTGCCAACCTAAGCAAAGAAAATACGGCTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR TCA 90 bp ACCCAGTGGTACACAGATGATTGTACATCAGTGGAACCAGAGAAAGCACAGGCCCATTGCTGTAGAAGTTaGGTTCGAAGACTGATGGGA +
Preference number: 4 (lower is better)
Translates to: TQWYTDDCTSVEPEKAQAHCCRS*VRRLMG
Trigger: TCCCATCAGTCTTCGAACTCAACTTCTACAGCAATG...GGCCTGTGCTTTCTCTGGTTCCACTGATGTACAATCATCTGTGTACCACTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR TCA 90 bp TTCCAGAAGGAAGACTCGAAGCCATCTCAGTTAACAGTTCTACACATTTCCCACGGCACCTTCAACTCTTaGGCCAGAAGCTGGTACCTA +
Preference number: 4 (lower is better)
Translates to: FQKEDSKPSQLTVLHISHGTFNS*ARSWYL
Trigger: TAGGTACCAGCTTCTGGCTCAAGAGTTGAAGGTGCC...GTGGGAAATGTGTAGAACTGTTAACTGAGATGGCTTCGAGTCTTCCTTCTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR TCA 90 bp GGGTACCAGTCACCTGGACTGGGGTGCAGTACACAATCTGTGTGCAGTACAGAATTTAAATGCAGAACTTaGGAGGGATCACAACAGCAT +
Preference number: 4 (lower is better)
Translates to: GYQSPGLGCSTQSVCSTEFKCRT*EGSQQH
Trigger: ATGCTGTTGTGATCCCTCTCAAGTTCTGCATTTAAA...TTCTGTACTGCACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGTACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR TCA 90 bp GGCAAGTGGACAGAGGACTTTCTCTGGAGAGCCAGTAACGTGAGAAGATGGCCAAAAGCAGCTGTGAACTaGAAACAACCCAAATATCCA +
Preference number: 4 (lower is better)
Translates to: GKWTEDFLWRASNVRRWPKAAVN*KQPKYP
Trigger: TGGATATTTGGGTTGTTTTCAGTTCACAGCTGCTTT...TGGCCATCTTCTCACGTTACTGGCTCTCCAGAGAAAGTCCTCTGTCCACTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR TCA 90 bp CCCCTGCCCCTCATGCAGAGAATCTCTGCTGGAAACAACTGCTGGCTTTCAAACAGGAAACAAGAATTCTaGTCCCGAGATTACCCATTA +
Preference number: 4 (lower is better)
Translates to: PLPLMQRISAGNNCWLSNRKQEF*SRDYPL
Trigger: TAATGGGTAATCTCGGGATCAGAATTCTTGTTTCCT...GTTTGAAAGCCAGCAGTTGTTTCCAGCAGAGATTCTCTGCATGAGGGGCAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR TCA 90 bp TTGCAGATACTCAGGTTCTGGAACAGGACCACTGAAGTTGTGAACAAAGATGGCGAGCTAGGAAGAGAATaGGGGCAAGTCAGCAGACAA +
Preference number: 4 (lower is better)
Translates to: LQILRFWNRTTEVVNKDGELGRE*GQVSRQ
Trigger: TTGTCTGCTGACTTGCCCTCATTCTCTTCCTAGCTC...GCCATCTTTGTTCACAACTTCAGTGGTCCTGTTCCAGAACCTGAGTATCTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp ACACAAGGCAAGTGGACAGAGGACTTTCTCTGGAGAGCCAGTAACGTGAGAAGAGCTATCAGTTTCGGGTaGAGAATGTCCATACAACAG +
Preference number: 4 (lower is better)
Translates to: TQGKWTEDFLWRASNVRRAISFG*RMSIQQ
Trigger: CTGTTGTATGGACATTCTGCACCCGAAACTGATAGC...TCTTCTCACGTTACTGGCTCTCCAGAGAAAGTCCTCTGTCCACTTGCCTTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp ACCAATGGGAGACCACCAAGATTATCTCACTCCTTCTGCAGCACCTATTCCCTGTGTACCAAGGGTCAGTaGAGATTCATCCATGTCACA +
Preference number: 4 (lower is better)
Translates to: TNGRPPRLSHSFCSTYSLCTKGQ*RFIHVT
Trigger: TGTGACATGGATGAATCTGCACTGACCCTTGGTACA...CAGGGAATAGGTGCTGCAGAAGGAGTGAGATAATCTTGGTGGTCTCCCATTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp TATTCCCTGCCTCCCCTAAATGGCCTTTGCCCACAGTCCAGCACTGTGGGGAATAGTAATTCAACTATATaGCCATGGAGCAAAGCTCTA +
Preference number: 4 (lower is better)
Translates to: YSLPPLNGLCPQSSTVGNSNSTI*PWSKAL
Trigger: TAGAGCTTTGCTCCATGGGCATATAGTTGAATTACT...ATTCCCCACAGTGCTGGACTGTGGGCAAAGGCCATTTAGGGGAGGCAGGGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp ACCCAGTGGTACACAGATGATTGTACATCAGTGGAACCAGAGAAAGCACAGGCCTCTAATAACACCTCTTaGTACACTCCACAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: TQWYTDDCTSVEPEKAQASNNTS*YTPQAL
Trigger: GAGAGCCTGTGGAGTGTAGCAAGAGGTGTTATTAGA...GGCCTGTGCTTTCTCTGGTTCCACTGATGTACAATCATCTGTGTACCACTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp CCCCTGCCCCTCATGCAGAGAATCTCTGCTGGAAACAACTGCTGGCTTTCAAACGCAGTGAATAGAATATaGTCAGCCAGATTTGCAATC +
Preference number: 4 (lower is better)
Translates to: PLPLMQRISAGNNCWLSNAVNRI*SARFAI
Trigger: GATTGCAAATCTGGCTGAGCATATTCTATTCACTGC...GTTTGAAAGCCAGCAGTTGTTTCCAGCAGAGATTCTCTGCATGAGGGGCAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp ACCAATGGGAGACCACCAAGATTATCTCACTCCTTCTGCAGCACCTATTCCCTGACAGTCACTCAAGTCTaGAGAAAGACCAATGGGAGA +
Preference number: 4 (lower is better)
Translates to: TNGRPPRLSHSFCSTYSLTVTQV*RKTNGR
Trigger: TCTCCCATTGGTCTTTCTGCAGACTTGAGTGACTGT...CAGGGAATAGGTGCTGCAGAAGGAGTGAGATAATCTTGGTGGTCTCCCATTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp GGGTACCAGTCACCTGGACTGGGGTGCAGTACACAATCTGTGTGCAGTACAGAACATTTTCAGTCACATTaGTGGCAAACATGCCCTTAT +
Preference number: 4 (lower is better)
Translates to: GYQSPGLGCSTQSVCSTEHFQSH*WQTCPY
Trigger: ATAAGGGCATGTTTGCCACCAATGTGACTGAAAATG...TTCTGTACTGCACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGTACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp CCCCTGCCCCTCATGCAGAGAATCTCTGCTGGAAACAACTGCTGGCTTTCAAACCAAGGTACTGAAGATTaGGATGTTGAGATTATTGCC +
Preference number: 4 (lower is better)
Translates to: PLPLMQRISAGNNCWLSNQGTED*DVEIIA
Trigger: GGCAATAATCTCAACATCCCAATCTTCAGTACCTTG...GTTTGAAAGCCAGCAGTTGTTTCCAGCAGAGATTCTCTGCATGAGGGGCAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp TCAAGTAGTTTCAGCTCCAAACTACAACTGTATAAAATAGTACTCCCACCCCAAGCTGATCAGGTTAGGTaGGGTGCTAGTGGGACCCCC +
Preference number: 4 (lower is better)
Translates to: SSSFSSKLQLYKIVLPPQADQVR*GASGTP
Trigger: GGGGGTCCCACTAGCACCCCACCTAACCTGATCAGC...TTGGGGTGGGAGTACTATTTTATACAGTTGTAGTTTGGAGCTGAAACTACTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp AGAGAAGCCGTATTTTCTTTGCTTAGGTTGGCAAAGCAGCAGCTCTTTGCAGCACCCCATCCAGGTTACTaGCAATTCCACAATTTGGGC +
Preference number: 4 (lower is better)
Translates to: REAVFSLLRLAKQQLFAAPHPGY*QFHNLG
Trigger: GCCCAAATTGTGGAATTGCCAGTAACCTGGATGGGG...TGCTGCAAAGAGCTGCTGCTTTGCCAACCTAAGCAAAGAAAATACGGCTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp ACACAAGGCAAGTGGACAGAGGACTTTCTCTGGAGAGCCAGTAACGTGAGAAGACTGCAGAAAGACCAATaGGAGACCACCAAGATTATC +
Preference number: 4 (lower is better)
Translates to: TQGKWTEDFLWRASNVRRLQKDQ*ETTKII
Trigger: GATAATCTTGGTGGTCTCCCATTGGTCTTTCTGCAG...TCTTCTCACGTTACTGGCTCTCCAGAGAAAGTCCTCTGTCCACTTGCCTTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp GGCAAGTGGACAGAGGACTTTCTCTGGAGAGCCAGTAACGTGAGAAGATGGCCATTATACCATAAATGGTaGACACCTACCCCAATATCC +
Preference number: 4 (lower is better)
Translates to: GKWTEDFLWRASNVRRWPLYHKW*TPTPIS
Trigger: GGATATTGGGGTAGGTGTCCACCATTTATGGTATAA...TGGCCATCTTCTCACGTTACTGGCTCTCCAGAGAAAGTCCTCTGTCCACTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp TCACATCAGCACTACATGAAAGCGGCCCCCTGCCCCTCATGCAGAGAATCTCTGGTAGGTAAACAGGTATaGACCTGTGTATTTCATAAA +
Preference number: 4 (lower is better)
Translates to: SHQHYMKAAPCPSCRESLVGKQV*TCVFHK
Trigger: TTTATGAAATACACAGGTGCATACCTGTTTACCTAC...CAGAGATTCTCTGCATGAGGGGCAGGGGGCCGCTTTCATGTAGTGCTGATGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp GGCAAGTGGACAGAGGACTTTCTCTGGAGAGCCAGTAACGTGAGAAGATGGCCACTGTTAAACCTACTTTaGTTACACCTACTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: GKWTEDFLWRASNVRRWPLLNLL*LHLLCP
Trigger: AGGACAAAGTAGGTGTAAGCAAAGTAGGTTTAACAG...TGGCCATCTTCTCACGTTACTGGCTCTCCAGAGAAAGTCCTCTGTCCACTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp ACCAATGGGAGACCACCAAGATTATCTCACTCCTTCTGCAGCACCTATTCCCTGAAGCCCCCAAGCTTATaGATCAAGGTACTGAAGATT +
Preference number: 4 (lower is better)
Translates to: TNGRPPRLSHSFCSTYSLKPPSL*IKVLKI
Trigger: AATCTTCAGTACCTTGATCCATAAGCTTGGGGGCTT...CAGGGAATAGGTGCTGCAGAAGGAGTGAGATAATCTTGGTGGTCTCCCATTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp TTCCAGAAGGAAGACTCGAAGCCATCTCAGTTAACAGTTCTACACATTTCCCACGGCAAGGCAGTGAGATaGTGCCTTCATTGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: FQKEDSKPSQLTVLHISHGKAVR*CLHWRE
Trigger: TTCTCTCCAATGAAGGCACCATCTCACTGCCTTGCC...GTGGGAAATGTGTAGAACTGTTAACTGAGATGGCTTCGAGTCTTCCTTCTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR TCA 90 bp AGAGAAGCCGTATTTTCTTTGCTTAGGTTGGCAAAGCAGCAGCTCTTTGCAGCAAGCGAGTCCCAATCTTaGATAATGGTGAGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: REAVFSLLRLAKQQLFAASESQS*IMVSLS
Trigger: ACTCAAGCTCACCATTATTCAAGATTGGGACTCGCT...TGCTGCAAAGAGCTGCTGCTTTGCCAACCTAAGCAAAGAAAATACGGCTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp ACACAAGGCAAGTGGACAGAGGACTTTCTCTGGAGAGCCAGTAACGTGAGAAGACAAATTCGTCTCAGTTaGAGCTTTAACCATCTCAAG +
Preference number: 4 (lower is better)
Translates to: TQGKWTEDFLWRASNVRRQIRLS*SFNHLK
Trigger: CTTGAGATGGTTAAAGCTGCAACTGAGACGAATTTG...TCTTCTCACGTTACTGGCTCTCCAGAGAAAGTCCTCTGTCCACTTGCCTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp TTGCAGATACTCAGGTTCTGGAACAGGACCACTGAAGTTGTGAACAAAGATGGCAAGAAGGTGATAAACTaGTGGTGCTCCTTGGATTGG +
Preference number: 4 (lower is better)
Translates to: LQILRFWNRTTEVVNKDGKKVIN*WCSLDW
Trigger: CCAATCCAAGGAGCACCAGCAGTTTATCACCTTCTT...GCCATCTTTGTTCACAACTTCAGTGGTCCTGTTCCAGAACCTGAGTATCTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp CCCCTGCCCCTCATGCAGAGAATCTCTGCTGGAAACAACTGCTGGCTTTCAAACATTTTCATAAATGAATaGCCTACTTGTGATACGCTG +
Preference number: 4 (lower is better)
Translates to: PLPLMQRISAGNNCWLSNIFINE*PTCDTL
Trigger: CAGCGTATCACAAGTAGGGCATTCATTTATGAAAAT...GTTTGAAAGCCAGCAGTTGTTTCCAGCAGAGATTCTCTGCATGAGGGGCAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp TCAAGTAGTTTCAGCTCCAAACTACAACTGTATAAAATAGTACTCCCACCCCAACCCCACTTCCACCACTaGCAACCTGTGAGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: SSSFSSKLQLYKIVLPPQPHFHH*QPVSSQ
Trigger: CTGAGAACTCACAGGTTGCCAGTGGTGGAAGTGGGG...TTGGGGTGGGAGTACTATTTTATACAGTTGTAGTTTGGAGCTGAAACTACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp TTGAACATCAATATGATGCTCAAAAGACATGCTCATCAGAGCATTTTGGGTTTTGTCAGCAGACAAGGGTaGGGCCCCACTTCCACCACT +
Preference number: 4 (lower is better)
Translates to: LNINMMLKRHAHQSILGFVSRQG*GPTSTT
Trigger: AGTGGTGGAAGTGGGGCCCCACCCTTGTCTGCTGAC...AAAACCCAAAATGCTCTGATGAGCATGTCTTTTGAGCATCATATTGATGTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR TCA 90 bp ACCAATGGGAGACCACCAAGATTATCTCACTCCTTCTGCAGCACCTATTCCCTGAAAGAGCTTAATATATaGAATTTTGGGAGGGACAGC +
Preference number: 4 (lower is better)
Translates to: TNGRPPRLSHSFCSTYSLKELNI*NFGRDS
Trigger: GCTGTCCCTCCCAAAATTTCATATATTAAGCTCTTT...CAGGGAATAGGTGCTGCAGAAGGAGTGAGATAATCTTGGTGGTCTCCCATTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp TCAAGTAGTTTCAGCTCCAAACTACAACTGTATAAAATAGTACTCCCACCCCAAGTAAGAAAGGCGTCTTaGAAGCCATCCGCGGTGTCT +
Preference number: 4 (lower is better)
Translates to: SSSFSSKLQLYKIVLPPQVRKAS*KPSAVS
Trigger: AGACACCGCGGATGGCTTGCAAGACGCCTTTCTTAC...TTGGGGTGGGAGTACTATTTTATACAGTTGTAGTTTGGAGCTGAAACTACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp GCTAGCAAATCATACATTGCATTCCCCAAAGCATCTGAACGTACTTCTAGAAAAACGGCTTTTGATTGCTaGTGGGCAGAACCATCAGGG +
Preference number: 4 (lower is better)
Translates to: ASKSYIAFPKASERTSRKTAFDC*WAEPSG
Trigger: CCCTGATGGTTCTGCCCAGCAGCAATCAAAAGCCGT...TTTTCTAGAAGTACGTTCAGATGCTTTGGGGAATGCAATGTATGATTTGCTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp ACCAATGGGAGACCACCAAGATTATCTCACTCCTTCTGCAGCACCTATTCCCTGTATTTGTGCAACTTTTaGAGATACTCAGGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: TNGRPPRLSHSFCSTYSLYLCNF*RYSGSG
Trigger: TCCAGAACCTGAGTATCTGCAAAAGTTGCACAAATA...CAGGGAATAGGTGCTGCAGAAGGAGTGAGATAATCTTGGTGGTCTCCCATTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp TTCCAGAAGGAAGACTCGAAGCCATCTCAGTTAACAGTTCTACACATTTCCCACATGCCAAGCCCTTACTaGGCTAAAGTGCATTGTAAG +
Preference number: 4 (lower is better)
Translates to: FQKEDSKPSQLTVLHISHMPSPY*AKVHCK
Trigger: CTTACAATGCACTTTAGCGCAGTAAGGGCTTGGCAT...GTGGGAAATGTGTAGAACTGTTAACTGAGATGGCTTCGAGTCTTCCTTCTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR CAA 72 bp TGTATTCTGATACGTTCAGTGAAAAAGCCAGGATCATaGGGGCTGTTCTCTCTATCAAAGGAAAGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: CILIRSVKKPGS*GLFSLSKERAP
Trigger: CGGAGCTCTTTCCTTTGATAGAGAGAACAGCCCCAATGATCCTGGCTTTTTCACTGAACGTATCAGAATACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000348367.9
3UTR CAA 72 bp CTTCCACCACTGGCAACCTGTGAGTTCTCAGATGACTaGCTGTTAAACCTACTTTGCTTACACCTACTTTGT +
Preference number: 4 (lower is better)
Translates to: LPPLATCEFSDD*LLNLLCLHLLC
Trigger: ACAAAGTAGGTGTAAGCAAAGTAGGTTTAACAGCAAGTCATCTGAGAACTCACAGGTTGCCAGTGGTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR TCA 90 bp CACCATTTCTATAAAACACTGATGAACATCTCACAGAGCACTCATATTACATGGTGTCTGGCAAGGCAGTaGGATGGTGCCTTCATTGGA +
Preference number: 4 (lower is better)
Translates to: HHFYKTLMNISQSTHITWCLARQ*DGAFIG
Trigger: TCCAATGAAGGCACCATCTCACTGCCTTGCCAGACA...CCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGTTTTATAGAAATGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR TCA 90 bp TTGCAGATACTCAGGTTCTGGAACAGGACCACTGAAGTTGTGAACAAAGATGGCTGTTCAAAGCAGCTGTaGACTGAAAACAACCCAAAT +
Preference number: 4 (lower is better)
Translates to: LQILRFWNRTTEVVNKDGCSKQL*TENNPN
Trigger: ATTTGGGTTGTTTTCAGTTCACAGCTGCTTTGAACA...GCCATCTTTGTTCACAACTTCAGTGGTCCTGTTCCAGAACCTGAGTATCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp CACCATTTCTATAAAACACTGATGAACATCTCACAGAGCACTCATATTACATGGCCCAGCTCTGGGGAGTaGAGGAGTAACAACATCTTC +
Preference number: 4 (lower is better)
Translates to: HHFYKTLMNISQSTHITWPSSGE*RSNNIF
Trigger: GAAGATGTTGTTACTCCTGCACTCCCCAGAGCTGGG...CCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGTTTTATAGAAATGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp GCTAGCAAATCATACATTGCATTCCCCAAAGCATCTGAACGTACTTCTAGAAAAAGATGGTGCCTTCATTaGAGAGAAGGTAGCACAGGC +
Preference number: 4 (lower is better)
Translates to: ASKSYIAFPKASERTSRKRWCLH*REGSTG
Trigger: GCCTGTGCTACCTTCTCTCCAATGAAGGCACCATCT...TTTTCTAGAAGTACGTTCAGATGCTTTGGGGAATGCAATGTATGATTTGCTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp TCAAGTAGTTTCAGCTCCAAACTACAACTGTATAAAATAGTACTCCCACCCCAAGGCAAGGCAGTGAGATaGTGCCTTCATTGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: SSSFSSKLQLYKIVLPPQGKAVR*CLHWRE
Trigger: TTCTCTCCAATGAAGGCACCATCTCACTGCCTTGCC...TTGGGGTGGGAGTACTATTTTATACAGTTGTAGTTTGGAGCTGAAACTACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp CACCATTTCTATAAAACACTGATGAACATCTCACAGAGCACTCATATTACATGGACTGCTGGTGCTCCTTaGATTGGCTCACCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: HHFYKTLMNISQSTHITWTAGAP*IGSPSG
Trigger: ACCTGAAGGTGAGCCAATCCAAGGAGCACCAGCAGT...CCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGTTTTATAGAAATGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp TTCCAGAAGGAAGACTCGAAGCCATCTCAGTTAACAGTTCTACACATTTCCCACTTTCTTTGCTTAGGTTaGCAAAGCAGCAGCTCTTTG +
Preference number: 4 (lower is better)
Translates to: FQKEDSKPSQLTVLHISHFLCLG*QSSSSL
Trigger: CAAAGAGCTGCTGCTTTGCCAACCTAAGCAAAGAAA...GTGGGAAATGTGTAGAACTGTTAACTGAGATGGCTTCGAGTCTTCCTTCTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp AGAGAAGCCGTATTTTCTTTGCTTAGGTTGGCAAAGCAGCAGCTCTTTGCAGCAAAAGGTCAGCTTGTCTaGATGAGCATAACTTTGGTT +
Preference number: 4 (lower is better)
Translates to: REAVFSLLRLAKQQLFAAKGQLV*MSITLV
Trigger: AACCAAAGTTATGCTCATCCAGACAAGCTGACCTTT...TGCTGCAAAGAGCTGCTGCTTTGCCAACCTAAGCAAAGAAAATACGGCTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp TTCCAGAAGGAAGACTCGAAGCCATCTCAGTTAACAGTTCTACACATTTCCCACAGGAGAAAAAGGTCCTaGTGTCAAAATAGTTTGGGC +
Preference number: 4 (lower is better)
Translates to: FQKEDSKPSQLTVLHISHRRKRS*CQNSLG
Trigger: GCCCAAACTATTTTGACACCAGGACCTTTTTCTCCT...GTGGGAAATGTGTAGAACTGTTAACTGAGATGGCTTCGAGTCTTCCTTCTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR TCA 90 bp CACCAGTTAATTACAAAAAGCATGCATATTTATCCTCACAGTGAGTTAAGTGGTGTTGAGTTCGAAGACTaGTGGGACAGTTGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: HQLITKSMHIYPHSELSGVEFED*WDSCAG
Trigger: CCCAGCACAACTGTCCCATCAGTCTTCGAACTCAAC...ACCACTTAACTCACTGTGAGGATAAATATGCATGCTTTTTGTAATTAACTGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp TTCCAGAAGGAAGACTCGAAGCCATCTCAGTTAACAGTTCTACACATTTCCCACAGCAGCTGTATGGCATaGATTACTACATCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: FQKEDSKPSQLTVLHISHSSCMA*ITTSSE
Trigger: TTCAGAAGATGTAGTAATGCATGCCATACAGCTGCT...GTGGGAAATGTGTAGAACTGTTAACTGAGATGGCTTCGAGTCTTCCTTCTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp CACCATTTCTATAAAACACTGATGAACATCTCACAGAGCACTCATATTACATGGGTGTTATCTGCAGGCTaGTGTGTTGATGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: HHFYKTLMNISQSTHITWVLSAG*CVDAEL
Trigger: CAGCTCTGCATCAACACAGCAGCCTGCAGATAACAC...CCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGTTTTATAGAAATGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp TTAATACCTTCCATCAAGACATTTCAGAGCTCTAGACGTTTAGAAATAAGGTCAAAAGCAGCAGCTCTTTaGAGCAATGACAGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LIPSIKTFQSSRRLEIRSKAAAL*SNDRQG
Trigger: GCCCTGCCTGTCATTGCTGCAAAGAGCTGCTGCTTT...TGACCTTATTTCTAAACGTCTAGAGCTCTGAAATGTCTTGATGGAAGGTATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp TTCCAGAAGGAAGACTCGAAGCCATCTCAGTTAACAGTTCTACACATTTCCCACCTTTTAGCAAAACGGTaGTATCTGGAAGCTTCATTG +
Preference number: 4 (lower is better)
Translates to: FQKEDSKPSQLTVLHISHLLAKR*YLEASL
Trigger: CAATGAAGCTTCCAGATAGCACCGTTTTGCTAAAAG...GTGGGAAATGTGTAGAACTGTTAACTGAGATGGCTTCGAGTCTTCCTTCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp GCTAGCAAATCATACATTGCATTCCCCAAAGCATCTGAACGTACTTCTAGAAAAAGTCTTCGACCAATGTaGAGAGATCAATTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: ASKSYIAFPKASERTSRKSLRPM*RDQFPA
Trigger: GGCAGGGAATTGATCTCTCCACATTGGTCGAAGACT...TTTTCTAGAAGTACGTTCAGATGCTTTGGGGAATGCAATGTATGATTTGCTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp AGAGAAGCCGTATTTTCTTTGCTTAGGTTGGCAAAGCAGCAGCTCTTTGCAGCATTGTTTAACCTTATGTaGAAGCCATCACTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: REAVFSLLRLAKQQLFAALFNLM*KPSLLE
Trigger: TTCCAACAGTGATGGCTTCCACATAAGGTTAAACAA...TGCTGCAAAGAGCTGCTGCTTTGCCAACCTAAGCAAAGAAAATACGGCTTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp TTCCAGAAGGAAGACTCGAAGCCATCTCAGTTAACAGTTCTACACATTTCCCACAGCACTCATATTACATaGAGTGCTATGGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: FQKEDSKPSQLTVLHISHSTHIT*SAMGNA
Trigger: AGCATTTCCCATAGCACTCCATGTAATATGAGTGCT...GTGGGAAATGTGTAGAACTGTTAACTGAGATGGCTTCGAGTCTTCCTTCTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp TTGCAGATACTCAGGTTCTGGAACAGGACCACTGAAGTTGTGAACAAAGATGGCCTTTTATACCATAAATaGTGGACACCTACCCCAATA +
Preference number: 4 (lower is better)
Translates to: LQILRFWNRTTEVVNKDGLLYHK*WTPTPI
Trigger: TATTGGGGTAGGTGTCCACCATTTATGGTATAAAAG...GCCATCTTTGTTCACAACTTCAGTGGTCCTGTTCCAGAACCTGAGTATCTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
3UTR CAA 72 bp TGCGCTAAAGTGCATTGTAAGTTTCCAGGTGCAAACTaGGTTTCCCAGCAACACCATTTCTATAAAACACTG +
Preference number: 4 (lower is better)
Translates to: CAKVHCKFPGAN*VSQQHHFYKTL
Trigger: CAGTGTTTTATAGAAATGGTGTTGCTGGGAAACCAAGTTTGCACCTGGAAACTTACAATGCACTTTAGCGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR TCA 90 bp CACCATTTCTATAAAACACTGATGAACATCTCACAGAGCACTCATATTACATGGTTTGTTAACGGCTTTTaGTTGCTGCTGGGCAGAACC +
Preference number: 4 (lower is better)
Translates to: HHFYKTLMNISQSTHITWFVNGF*LLLGRT
Trigger: GGTTCTGCCCAGCAGCAATCAAAAGCCGTTAACAAA...CCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGTTTTATAGAAATGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp CACCAGTTAATTACAAAAAGCATGCATATTTATCCTCACAGTGAGTTAAGTGGTGCTGGTAACAACGCTTaGTCCAGGGAAAGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: HQLITKSMHIYPHSELSGAGNNA*SRESRA
Trigger: TGCTCTACTTTCCCTGGAGCAAGCGTTGTTACCAGC...ACCACTTAACTCACTGTGAGGATAAATATGCATGCTTTTTGTAATTAACTGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp TTGAACATCAATATGATGCTCAAAAGACATGCTCATCAGAGCATTTTGGGTTTTGCTGGTAACAACGCTTaGTCCAGGGAAAGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: LNINMMLKRHAHQSILGFAGNNA*SRESRA
Trigger: TGCTCTACTTTCCCTGGAGCAAGCGTTGTTACCAGC...AAAACCCAAAATGCTCTGATGAGCATGTCTTTTGAGCATCATATTGATGTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp CACCATTTCTATAAAACACTGATGAACATCTCACAGAGCACTCATATTACATGGTCTTCCTGGTCATCGTaGTCTGCCACTGTAAGAATG +
Preference number: 4 (lower is better)
Translates to: HHFYKTLMNISQSTHITWSSWSS*SATVRM
Trigger: CATTCTTACAGTGGCAGAGCACGATGACCAGGAAGA...CCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGTTTTATAGAAATGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp TTCCAGAAGGAAGACTCGAAGCCATCTCAGTTAACAGTTCTACACATTTCCCACATTGAGGTAGAAAAGTaGTGCTCAGTTCTAAAACAG +
Preference number: 4 (lower is better)
Translates to: FQKEDSKPSQLTVLHISHIEVEK*CSVLKQ
Trigger: CTGTTTTAGAACTGAGCAGCACTTTTCTACCTCAAT...GTGGGAAATGTGTAGAACTGTTAACTGAGATGGCTTCGAGTCTTCCTTCTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp CACCATTTCTATAAAACACTGATGAACATCTCACAGAGCACTCATATTACATGGTTCATTTGCCAGCAGTaGCACACGTTACCTACAGCA +
Preference number: 4 (lower is better)
Translates to: HHFYKTLMNISQSTHITWFICQQ*HTLPTA
Trigger: TGCTGTAGGTAACGTGTGGCACTGCTGGCAAATGAA...CCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGTTTTATAGAAATGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp CACCATTTCTATAAAACACTGATGAACATCTCACAGAGCACTCATATTACATGGATCTTTCCGTCCATCTaGTGTTTCATCGAGCCTTCG +
Preference number: 4 (lower is better)
Translates to: HHFYKTLMNISQSTHITWIFPSI*CFIEPS
Trigger: CGAAGGCTCGATGAAACACCAGATGGACGGAAAGAT...CCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGTTTTATAGAAATGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp TTCCAGAAGGAAGACTCGAAGCCATCTCAGTTAACAGTTCTACACATTTCCCACAGGAAAACTGCTATTTaGTTGGAGGATTTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: FQKEDSKPSQLTVLHISHRKTAI*LEDFQE
Trigger: TTCTTGGAAATCCTCCAACCAAATAGCAGTTTTCCT...GTGGGAAATGTGTAGAACTGTTAACTGAGATGGCTTCGAGTCTTCCTTCTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp CACCAGTTAATTACAAAAAGCATGCATATTTATCCTCACAGTGAGTTAAGTGGTACCACATGCATATACTaGACAGGTTGTGCACGGCAC +
Preference number: 4 (lower is better)
Translates to: HQLITKSMHIYPHSELSGTTCIY*TGCARH
Trigger: GTGCCGTGCACAACCTGTCCAGTATATGCATGTGGT...ACCACTTAACTCACTGTGAGGATAAATATGCATGCTTTTTGTAATTAACTGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp TTAATACCTTCCATCAAGACATTTCAGAGCTCTAGACGTTTAGAAATAAGGTCAACACCCAAGACTCCCTaGGTATCCTCCAAATGTAGC +
Preference number: 4 (lower is better)
Translates to: LIPSIKTFQSSRRLEIRSTPKTP*VSSKCS
Trigger: GCTACATTTGGAGGATACCCAGGGAGTCTTGGGTGT...TGACCTTATTTCTAAACGTCTAGAGCTCTGAAATGTCTTGATGGAAGGTATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp AGAGAAGCCGTATTTTCTTTGCTTAGGTTGGCAAAGCAGCAGCTCTTTGCAGCAGGCAATTCCACAATTTaGGCTTACATTCATTGTAAT +
Preference number: 4 (lower is better)
Translates to: REAVFSLLRLAKQQLFAAGNSTI*AYIHCN
Trigger: ATTACAATGAATGTAAGCCCAAATTGTGGAATTGCC...TGCTGCAAAGAGCTGCTGCTTTGCCAACCTAAGCAAAGAAAATACGGCTTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR TCA 90 bp CACCATTTCTATAAAACACTGATGAACATCTCACAGAGCACTCATATTACATGGTCAGTCATGAGGCACTaGAGAATGAGTTGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: HHFYKTLMNISQSTHITWSVMRH*RMSCAE
Trigger: TTCAGCACAACTCATTCTTCAGTGCCTCATGACTGA...CCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGTTTTATAGAAATGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR TCA 90 bp TTGAACATCAATATGATGCTCAAAAGACATGCTCATCAGAGCATTTTGGGTTTTTGTGGCACTCTCAGCTaGAGAGAGAGAATAAAACCC +
Preference number: 4 (lower is better)
Translates to: LNINMMLKRHAHQSILGFCGTLS*RERIKP
Trigger: GGGTTTTATTCTCTCTCTTCAGCTGAGAGTGCCACA...AAAACCCAAAATGCTCTGATGAGCATGTCTTTTGAGCATCATATTGATGTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp CACCATTTCTATAAAACACTGATGAACATCTCACAGAGCACTCATATTACATGGTGTACCAAGGGTCAGTaGAGATTCATCCATGTCACA +
Preference number: 4 (lower is better)
Translates to: HHFYKTLMNISQSTHITWCTKGQ*RFIHVT
Trigger: TGTGACATGGATGAATCTGCACTGACCCTTGGTACA...CCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGTTTTATAGAAATGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp CACCAGTTAATTACAAAAAGCATGCATATTTATCCTCACAGTGAGTTAAGTGGTCATTGGTGGCAAACATaGCCTTATGCACATCTCGCT +
Preference number: 4 (lower is better)
Translates to: HQLITKSMHIYPHSELSGHWWQT*PYAHLA
Trigger: AGCGAGATGTGCATAAGGGCATGTTTGCCACCAATG...ACCACTTAACTCACTGTGAGGATAAATATGCATGCTTTTTGTAATTAACTGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp GCTAGCAAATCATACATTGCATTCCCCAAAGCATCTGAACGTACTTCTAGAAAACCTCTTGTACTCTACTaGTGTTCAGCACATTTTCAG +
Preference number: 4 (lower is better)
Translates to: ASKSYIAFPKASERTSRKPLVLY*CSAHFQ
Trigger: CTGAAAATGTGCTGAACAGCAGTAGAGTACAAGAGG...TTTTCTAGAAGTACGTTCAGATGCTTTGGGGAATGCAATGTATGATTTGCTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp CACCATTTCTATAAAACACTGATGAACATCTCACAGAGCACTCATATTACATGGAGCCACTTCTGCAATTaGCTCTTGTACTCTACTGCT +
Preference number: 4 (lower is better)
Translates to: HHFYKTLMNISQSTHITWSHFCN*LLYSTA
Trigger: AGCAGTAGAGTACAAGAGGCAATTGCAGAAGTGGCT...CCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGTTTTATAGAAATGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp CACCATTTCTATAAAACACTGATGAACATCTCACAGAGCACTCATATTACATGGGAGTGCTATGGGAAATaGTTTTCCCCATCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: HHFYKTLMNISQSTHITWECYGK*FSPSRL
Trigger: TAACCTGGATGGGGAAAAGCATTTCCCATAGCACTC...CCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGTTTTATAGAAATGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp GCTAGCAAATCATACATTGCATTCCCCAAAGCATCTGAACGTACTTCTAGAAAACATATTCTGCCCCAGTaGTATCTGTTCATTACCGTT +
Preference number: 4 (lower is better)
Translates to: ASKSYIAFPKASERTSRKHILPQ*YLFITV
Trigger: AACGGTAATGAACAGATAGCACTGGGGCAGAATATG...TTTTCTAGAAGTACGTTCAGATGCTTTGGGGAATGCAATGTATGATTTGCTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp TTGAACATCAATATGATGCTCAAAAGACATGCTCATCAGAGCATTTTGGGTTTTAAGGTGATAAACTGCTaGTGCTCCTTGGATTGGCTC +
Preference number: 4 (lower is better)
Translates to: LNINMMLKRHAHQSILGFKVINC*CSLDWL
Trigger: GAGCCAATCCAAGGAGCACCAGCAGTTTATCACCTT...AAAACCCAAAATGCTCTGATGAGCATGTCTTTTGAGCATCATATTGATGTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp CACCAGTTAATTACAAAAAGCATGCATATTTATCCTCACAGTGAGTTAAGTGGTAGTTGTGAACAAAGATaGCAGCAGAGCTGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: HQLITKSMHIYPHSELSGSCEQR*QQSCRP
Trigger: AGGCCTACAGCTCTGCTGCCATCTTTGTTCACAACT...ACCACTTAACTCACTGTGAGGATAAATATGCATGCTTTTTGTAATTAACTGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR TCA 90 bp CACCAGTTAATTACAAAAAGCATGCATATTTATCCTCACAGTGAGTTAAGTGGTTCCAAAAGAAGCTGTTaGACAGTTTTAGCAGCACCC +
Preference number: 4 (lower is better)
Translates to: HQLITKSMHIYPHSELSGSKRSC*TVLAAP
Trigger: GGGTGCTGCTAAAACTGTTCAACAGCTTCTTTTGGA...ACCACTTAACTCACTGTGAGGATAAATATGCATGCTTTTTGTAATTAACTGGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR TCA 90 bp TTAATACCTTCCATCAAGACATTTCAGAGCTCTAGACGTTTAGAAATAAGGTCACATTGCTGTAGAAGTTaGGTTCGAAGACTGATGGGA +
Preference number: 4 (lower is better)
Translates to: LIPSIKTFQSSRRLEIRSHCCRS*VRRLMG
Trigger: TCCCATCAGTCTTCGAACTCAACTTCTACAGCAATG...TGACCTTATTTCTAAACGTCTAGAGCTCTGAAATGTCTTGATGGAAGGTATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR TCA 90 bp CACCAGTTAATTACAAAAAGCATGCATATTTATCCTCACAGTGAGTTAAGTGGTTTTTGTCGGTTGCATTaGGGTAGAAAAGTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: HQLITKSMHIYPHSELSGFCRLH*GRKVLL
Trigger: GAGCAGCACTTTTCTACCTCAATGCAACCGACAAAA...ACCACTTAACTCACTGTGAGGATAAATATGCATGCTTTTTGTAATTAACTGGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR TCA 90 bp TCAAGTAGTTTCAGCTCCAAACTACAACTGTATAAAATAGTACTCCCACCCCAACAAATAAATCTACACTaGTGGGCTTCACCTTCAACA +
Preference number: 4 (lower is better)
Translates to: SSSFSSKLQLYKIVLPPQQINLH*WASPST
Trigger: TGTTGAAGGTGAAGCCCATCAGTGTAGATTTATTTG...TTGGGGTGGGAGTACTATTTTATACAGTTGTAGTTTGGAGCTGAAACTACTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp GCTAGCAAATCATACATTGCATTCCCCAAAGCATCTGAACGTACTTCTAGAAAACAAATTCGTCTCAGTTaGAGCTTTAACCATCTCAAG +
Preference number: 4 (lower is better)
Translates to: ASKSYIAFPKASERTSRKQIRLS*SFNHLK
Trigger: CTTGAGATGGTTAAAGCTGCAACTGAGACGAATTTG...TTTTCTAGAAGTACGTTCAGATGCTTTGGGGAATGCAATGTATGATTTGCTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp CACCAGTTAATTACAAAAAGCATGCATATTTATCCTCACAGTGAGTTAAGTGGTTCTAATAACACCTCTTaGTACACTCCACAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: HQLITKSMHIYPHSELSGSNNTS*YTPQAL
Trigger: GAGAGCCTGTGGAGTGTAGCAAGAGGTGTTATTAGA...ACCACTTAACTCACTGTGAGGATAAATATGCATGCTTTTTGTAATTAACTGGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp CACCATTTCTATAAAACACTGATGAACATCTCACAGAGCACTCATATTACATGGCCTCTTGTTCAGAACTaGATAAAGGCTGCAAGCTAT +
Preference number: 4 (lower is better)
Translates to: HHFYKTLMNISQSTHITWPLVQN*IKAASY
Trigger: ATAGCTTGCAGCCTTTATGCAGTTCTGAACAAGAGG...CCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGTTTTATAGAAATGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp CACCAGTTAATTACAAAAAGCATGCATATTTATCCTCACAGTGAGTTAAGTGGTAAGAAGGTGATAAACTaGTGGTGCTCCTTGGATTGG +
Preference number: 4 (lower is better)
Translates to: HQLITKSMHIYPHSELSGKKVIN*WCSLDW
Trigger: CCAATCCAAGGAGCACCAGCAGTTTATCACCTTCTT...ACCACTTAACTCACTGTGAGGATAAATATGCATGCTTTTTGTAATTAACTGGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp CACCATTTCTATAAAACACTGATGAACATCTCACAGAGCACTCATATTACATGGAGTACACAATCTGTGTaGAGTACAGAAAGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: HHFYKTLMNISQSTHITWSTQSV*STESPH
Trigger: ATGAGGGCTTTCTGTACTGCACACAGATTGTGTACT...CCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGTTTTATAGAAATGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp CACCATTTCTATAAAACACTGATGAACATCTCACAGAGCACTCATATTACATGGTTTCAGTCACATTGGTaGCAAACATGCCCTTATGCA +
Preference number: 4 (lower is better)
Translates to: HHFYKTLMNISQSTHITWFQSHW*QTCPYA
Trigger: TGCATAAGGGCATGTTTGCCACCAATGTGACTGAAA...CCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGTTTTATAGAAATGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp CACCATTTCTATAAAACACTGATGAACATCTCACAGAGCACTCATATTACATGGTTCCCAGCAGCTGTATaGCATGCATTACTACATCTT +
Preference number: 4 (lower is better)
Translates to: HHFYKTLMNISQSTHITWFPAAV*HALLHL
Trigger: AAGATGTAGTAATGCATGCCATACAGCTGCTGGGAA...CCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGTTTTATAGAAATGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp TTAATACCTTCCATCAAGACATTTCAGAGCTCTAGACGTTTAGAAATAAGGTCATTCCAGGTGCAAACTTaGTTTCCCAGCAACACCATT +
Preference number: 4 (lower is better)
Translates to: LIPSIKTFQSSRRLEIRSFQVQT*FPSNTI
Trigger: AATGGTGTTGCTGGGAAACCAAGTTTGCACCTGGAA...TGACCTTATTTCTAAACGTCTAGAGCTCTGAAATGTCTTGATGGAAGGTATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp CACCATTTCTATAAAACACTGATGAACATCTCACAGAGCACTCATATTACATGGGAAGTTTTTGTCGGTTaGATTGAGGTAGAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: HHFYKTLMNISQSTHITWEVFVG*IEVEKC
Trigger: GCACTTTTCTACCTCAATGCAACCGACAAAAACTTC...CCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGTTTTATAGAAATGGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp TTAATACCTTCCATCAAGACATTTCAGAGCTCTAGACGTTTAGAAATAAGGTCAAATGCATGCATATTCTaGCCCAGTGCTATCTGTTCA +
Preference number: 4 (lower is better)
Translates to: LIPSIKTFQSSRRLEIRSNACIF*PSAICS
Trigger: TGAACAGATAGCACTGGGGCAGAATATGCATGCATT...TGACCTTATTTCTAAACGTCTAGAGCTCTGAAATGTCTTGATGGAAGGTATTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp TTGAACATCAATATGATGCTCAAAAGACATGCTCATCAGAGCATTTTGGGTTTTGATGCTCAAAAGACATaGTCATCAGAGCATTTTGGG +
Preference number: 4 (lower is better)
Translates to: LNINMMLKRHAHQSILGFDAQKT*SSEHFG
Trigger: CCCAAAATGCTCTGATGAGCATGTCTTTTGAGCATC...AAAACCCAAAATGCTCTGATGAGCATGTCTTTTGAGCATCATATTGATGTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CCA 90 bp CACCATTTCTATAAAACACTGATGAACATCTCACAGAGCACTCATATTACATGGTCCCAAATCATGTGCTaGGATGAAAGTTCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: HHFYKTLMNISQSTHITWSQIMC*DESSSV
Trigger: AACAGAAGAACTTTCATCCCAGCACATGATTTGGGA...CCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGTTTTATAGAAATGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp TTAATACCTTCCATCAAGACATTTCAGAGCTCTAGACGTTTAGAAATAAGGTCAAAGCCCCCAAGCTTATaGATCAAGGTACTGAAGATT +
Preference number: 4 (lower is better)
Translates to: LIPSIKTFQSSRRLEIRSKPPSL*IKVLKI
Trigger: AATCTTCAGTACCTTGATCCATAAGCTTGGGGGCTT...TGACCTTATTTCTAAACGTCTAGAGCTCTGAAATGTCTTGATGGAAGGTATTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp TTAATACCTTCCATCAAGACATTTCAGAGCTCTAGACGTTTAGAAATAAGGTCATCGTTCCTGCTAGTGTaGGTGATTGTGACACAATTT +
Preference number: 4 (lower is better)
Translates to: LIPSIKTFQSSRRLEIRSSFLLV*VIVTQF
Trigger: AAATTGTGTCACAATCACCCACACTAGCAGGAACGA...TGACCTTATTTCTAAACGTCTAGAGCTCTGAAATGTCTTGATGGAAGGTATTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp GCTAGCAAATCATACATTGCATTCCCCAAAGCATCTGAACGTACTTCTAGAAAAAAACTGCTATTTGGTTaGAGGATTTCCAAGAAACAG +
Preference number: 4 (lower is better)
Translates to: ASKSYIAFPKASERTSRKKLLFG*RISKKQ
Trigger: CTGTTTCTTGGAAATCCTCCAACCAAATAGCAGTTT...TTTTCTAGAAGTACGTTCAGATGCTTTGGGGAATGCAATGTATGATTTGCTAGC
38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR TCA 90 bp TTAATACCTTCCATCAAGACATTTCAGAGCTCTAGACGTTTAGAAATAAGGTCACAATGTATGGTGCTTTaGTGTTATGGCAGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: LIPSIKTFQSSRRLEIRSQCMVL*CYGRRE
Trigger: TTCTCTTCTGCCATAACATCAAAGCACCATACATTG...TGACCTTATTTCTAAACGTCTAGAGCTCTGAAATGTCTTGATGGAAGGTATTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR TCA 90 bp TTGAACATCAATATGATGCTCAAAAGACATGCTCATCAGAGCATTTTGGGTTTTTCAACTCAAACAGTTTaGGTGTCTTTACCACACAGA +
Preference number: 4 (lower is better)
Translates to: LNINMMLKRHAHQSILGFSTQTV*VSLPHR
Trigger: TCTGTGTGGTAAAGACACTCAAACTGTTTGAGTTGA...AAAACCCAAAATGCTCTGATGAGCATGTCTTTTGAGCATCATATTGATGTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp TTAATACCTTCCATCAAGACATTTCAGAGCTCTAGACGTTTAGAAATAAGGTCAGCAGTGAATAGAATATaGTCAGCCAGATTTGCAATC +
Preference number: 4 (lower is better)
Translates to: LIPSIKTFQSSRRLEIRSAVNRI*SARFAI
Trigger: GATTGCAAATCTGGCTGAGCATATTCTATTCACTGC...TGACCTTATTTCTAAACGTCTAGAGCTCTGAAATGTCTTGATGGAAGGTATTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp CACCATTTCTATAAAACACTGATGAACATCTCACAGAGCACTCATATTACATGGTATTTGTGCAACTTTTaGAGATACTCAGGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: HHFYKTLMNISQSTHITWYLCNF*RYSGSG
Trigger: TCCAGAACCTGAGTATCTGCAAAAGTTGCACAAATA...CCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGTTTTATAGAAATGGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp CACCAGTTAATTACAAAAAGCATGCATATTTATCCTCACAGTGAGTTAAGTGGTGAGGTAGAAAAGTGCTaGTCAGTTCTAAAACAGACA +
Preference number: 4 (lower is better)
Translates to: HQLITKSMHIYPHSELSGEVEKC*SVLKQT
Trigger: TGTCTGTTTTAGAACTGAGCAGCACTTTTCTACCTC...ACCACTTAACTCACTGTGAGGATAAATATGCATGCTTTTTGTAATTAACTGGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp TTAATACCTTCCATCAAGACATTTCAGAGCTCTAGACGTTTAGAAATAAGGTCATGTATTAAACTAAAATaGCAGACGGCAAGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: LIPSIKTFQSSRRLEIRSCIKLK*QTASLR
Trigger: CCTGAGACTTGCCGTCTGGCATTTTAGTTTAATACA...TGACCTTATTTCTAAACGTCTAGAGCTCTGAAATGTCTTGATGGAAGGTATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp TTAATACCTTCCATCAAGACATTTCAGAGCTCTAGACGTTTAGAAATAAGGTCACAAGGTACTGAAGATTaGGATGTTGAGATTATTGCC +
Preference number: 4 (lower is better)
Translates to: LIPSIKTFQSSRRLEIRSQGTED*DVEIIA
Trigger: GGCAATAATCTCAACATCCCAATCTTCAGTACCTTG...TGACCTTATTTCTAAACGTCTAGAGCTCTGAAATGTCTTGATGGAAGGTATTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp CACCAGTTAATTACAAAAAGCATGCATATTTATCCTCACAGTGAGTTAAGTGGTCAAAACGGTGCTATCTaGAAGCTTCATTGTGAAGAT +
Preference number: 4 (lower is better)
Translates to: HQLITKSMHIYPHSELSGQNGAI*KLHCED
Trigger: ATCTTCACAATGAAGCTTCCAGATAGCACCGTTTTG...ACCACTTAACTCACTGTGAGGATAAATATGCATGCTTTTTGTAATTAACTGGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR TCA 90 bp TTAATACCTTCCATCAAGACATTTCAGAGCTCTAGACGTTTAGAAATAAGGTCATATTTGCTGGTCATTTaGAACTCAATGGCACTTGTT +
Preference number: 4 (lower is better)
Translates to: LIPSIKTFQSSRRLEIRSYLLVI*NSMALV
Trigger: AACAAGTGCCATTGAGTTTCAAATGACCAGCAAATA...TGACCTTATTTCTAAACGTCTAGAGCTCTGAAATGTCTTGATGGAAGGTATTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp CACCAGTTAATTACAAAAAGCATGCATATTTATCCTCACAGTGAGTTAAGTGGTAGTAATTCAACTATATaGCCATGGAGCAAAGCTCTA +
Preference number: 4 (lower is better)
Translates to: HQLITKSMHIYPHSELSGSNSTI*PWSKAL
Trigger: TAGAGCTTTGCTCCATGGGCATATAGTTGAATTACT...ACCACTTAACTCACTGTGAGGATAAATATGCATGCTTTTTGTAATTAACTGGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp CACCAGTTAATTACAAAAAGCATGCATATTTATCCTCACAGTGAGTTAAGTGGTATCTCCAAGAATTGCTaGTGTCGAAGTAATTCAACT +
Preference number: 4 (lower is better)
Translates to: HQLITKSMHIYPHSELSGISKNC*CRSNST
Trigger: AGTTGAATTACTTCGACAGCAGCAATTCTTGGAGAT...ACCACTTAACTCACTGTGAGGATAAATATGCATGCTTTTTGTAATTAACTGGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR GCA 90 bp TTGAACATCAATATGATGCTCAAAAGACATGCTCATCAGAGCATTTTGGGTTTTATCTCCAAGAATTGCTaGTGTCGAAGTAATTCAACT +
Preference number: 4 (lower is better)
Translates to: LNINMMLKRHAHQSILGFISKNC*CRSNST
Trigger: AGTTGAATTACTTCGACAGCAGCAATTCTTGGAGAT...AAAACCCAAAATGCTCTGATGAGCATGTCTTTTGAGCATCATATTGATGTTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR GCA 90 bp CACCAGTTAATTACAAAAAGCATGCATATTTATCCTCACAGTGAGTTAAGTGGTTGCCTTTGTTTTTCATaGATTTTCAGAGTGCACAAC +
Preference number: 4 (lower is better)
Translates to: HQLITKSMHIYPHSELSGCLCFS*IFRVHN
Trigger: GTTGTGCACTCTGAAAATGCATGAAAAACAAAGGCA...ACCACTTAACTCACTGTGAGGATAAATATGCATGCTTTTTGTAATTAACTGGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CCA 90 bp CACCAGTTAATTACAAAAAGCATGCATATTTATCCTCACAGTGAGTTAAGTGGTTTATTTACCACTATGTaGCATAAGGGTTTAGGCATA +
Preference number: 4 (lower is better)
Translates to: HQLITKSMHIYPHSELSGLFTTM*HKGLGI
Trigger: TATGCCTAAACCCTTATGCCACATAGTGGTAAATAA...ACCACTTAACTCACTGTGAGGATAAATATGCATGCTTTTTGTAATTAACTGGTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS TCA 90 bp GCAAAGCTGATGGAGACTCTGGAGAAGACAGTCCCAGGCTGTGGGTaGATAAGCAAGGTCTGGTTCCTCTGGGTGCCTGTTTGCACGGCC +
Preference number: 5 (lower is better)
Translates to: AKLMETLEKTVPGCG*ISKVWFLWVPVCTA
Trigger: GGCCGTGCAAACAGGCACCCAGAGGAACCAGACCTTGCTTATTCACCCACAGCCTGGGACTGTCTTCTCCAGAGTCTCCATCAGCTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480130.5
CDS-3UTR CAA 90 bp GTGCACGGCACAACTCGAGTGGGTACCAGTCACCTGGACTGGGGTGCAGTACACCACCCCATTCCTCACTaGTGTGCTTACATCGACCAA +
Preference number: 5 (lower is better)
Translates to: VHGTTRVGTSHLDWGAVHHPIPH*CAYIDQ
Trigger: TTGGTCGATGTAAGCACACAAGTGAGGAATGGGGTG...GTGTACTGCACCCCAGTCCAGGTGACTGGTACCCACTCGAGTTGTGCCGTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CAA 90 bp TCACATCAGCACTACATGAAAGCGGCCCCCTGCCCCTCATGCAGAGAATCTCTGCAGGCCCTCCATGGTTaGAAGCCTGGGCTCAACAGT +
Preference number: 5 (lower is better)
Translates to: SHQHYMKAAPCPSCRESLQALHG*KPGLNS
Trigger: ACTGTTGAGCCCAGGCTTCAAACCATGGAGGGCCTG...CAGAGATTCTCTGCATGAGGGGCAGGGGGCCGCTTTCATGTAGTGCTGATGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CAA 90 bp GTGCACGGCACAACTCGAGTGGGTACCAGTCACCTGGACTGGGGTGCAGTACACTTTCCAGGTGCAAACTaGGTTTCCCAGCAACACCAT +
Preference number: 5 (lower is better)
Translates to: VHGTTRVGTSHLDWGAVHFPGAN*VSQQHH
Trigger: ATGGTGTTGCTGGGAAACCAAGTTTGCACCTGGAAA...GTGTACTGCACCCCAGTCCAGGTGACTGGTACCCACTCGAGTTGTGCCGTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CAA 90 bp GTGCACGGCACAACTCGAGTGGGTACCAGTCACCTGGACTGGGGTGCAGTACACATGTCTGGGATGACATaGGTAGACAGAGTATCTACC +
Preference number: 5 (lower is better)
Translates to: VHGTTRVGTSHLDWGAVHMSGMT*VDRVST
Trigger: GGTAGATACTCTGTCTACCAATGTCATCCCAGACAT...GTGTACTGCACCCCAGTCCAGGTGACTGGTACCCACTCGAGTTGTGCCGTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CAA 90 bp CCCCTGCCCCTCATGCAGAGAATCTCTGCTGGAAACAACTGCTGGCTTTCAAACTCCCCTAAATGGCCTTaGCCCACAGTCCAGCACTGT +
Preference number: 5 (lower is better)
Translates to: PLPLMQRISAGNNCWLSNSPKWP*PTVQHC
Trigger: ACAGTGCTGGACTGTGGGCAAAGGCCATTTAGGGGA...GTTTGAAAGCCAGCAGTTGTTTCCAGCAGAGATTCTCTGCATGAGGGGCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CAA 90 bp GTGCACGGCACAACTCGAGTGGGTACCAGTCACCTGGACTGGGGTGCAGTACACGATAAGAAACATCTATaGTACCAAGGGTCAGTGCAG +
Preference number: 5 (lower is better)
Translates to: VHGTTRVGTSHLDWGAVHDKKHL*YQGSVQ
Trigger: CTGCACTGACCCTTGGTACAATAGATGTTTCTTATC...GTGTACTGCACCCCAGTCCAGGTGACTGGTACCCACTCGAGTTGTGCCGTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CAA 90 bp GGGGTGCAGTACACAATCTGTGTGCAGTACAGAAAGCCCTCATCAGCTGTGGCCTCTCATGACCTTCATTaGCCAGCAGTGCCACACGTT +
Preference number: 5 (lower is better)
Translates to: GVQYTICVQYRKPSSAVASHDLH*PAVPHV
Trigger: AACGTGTGGCACTGCTGGCAAATGAAGGTCATGAGA...GGCCACAGCTGATGAGGGCTTTCTGTACTGCACACAGATTGTGTACTGCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS CCA 90 bp ATTAGCAAAGCTGATGGAGACTCTGGAGAAGACAGTCCCAGGCTGTaGGTGAATAAGCAAGGTCTGGTTCCTCTGGGTGCCTGTTTGCAC +
Preference number: 5 (lower is better)
Translates to: ISKADGDSGEDSPRL*VNKQGLVPLGACLH
Trigger: GTGCAAACAGGCACCCAGAGGAACCAGACCTTGCTTATTCACCCACAGCCTGGGACTGTCTTCTCCAGAGTCTCCATCAGCTTTGCTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480130.5
CDS-3UTR CAA 90 bp CCGCTCCTAAGACCAGGCCCTCCATGGTTTGAAGCCTGGGCTCAACAGTCACTCACATTTTCAGTCACATaGGTGGCAAACATGCCCTTA +
Preference number: 5 (lower is better)
Translates to: PLLRPGPPWFEAWAQQSLTFSVT*VANMPL
Trigger: TAAGGGCATGTTTGCCACCAATGTGACTGAAAATGT...GAGTGACTGTTGAGCCCAGGCTTCAAACCATGGAGGGCCTGGTCTTAGGAGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CAA 90 bp TCACATCAGCACTACATGAAAGCGGCCCCCTGCCCCTCATGCAGAGAATCTCTGCTTAGGTTTGCCCAGTaGTTCACCATTGTAGTGACC +
Preference number: 5 (lower is better)
Translates to: SHQHYMKAAPCPSCRESLLRFAQ*FTIVVT
Trigger: GGTCACTACAATGGTGAACAACTGGGCAAACCTAAG...CAGAGATTCTCTGCATGAGGGGCAGGGGGCCGCTTTCATGTAGTGCTGATGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CAA 90 bp ACACAAGGCAAGTGGACAGAGGACTTTCTCTGGAGAGCCAGTAACGTGAGAAGACTGGTGCTCCTTGGATaGGCTCACCTGAGTGTGCAA +
Preference number: 5 (lower is better)
Translates to: TQGKWTEDFLWRASNVRRLVLLG*AHLSVQ
Trigger: TTGCACACTCAGGTGAGCCAATCCAAGGAGCACCAG...TCTTCTCACGTTACTGGCTCTCCAGAGAAAGTCCTCTGTCCACTTGCCTTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS GCA 90 bp CTGTTTCATAACATAAAACTTCAGGACTCAGCTATCAGTTTCGGGTaGAGAATGTCCATACAACAGGGGAGCCGCTGCTGCCTGCCCTGG +
Preference number: 5 (lower is better)
Translates to: LFHNIKLQDSAISFG*RMSIQQGSRCCLPW
Trigger: CCAGGGCAGGCAGCAGCGGCTCCCCTGTTGTATGGACATTCTGCACCCGAAACTGATAGCTGAGTCCTGAAGTTTTATGTTATGAAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CAA 90 bp AGAGAAGCCGTATTTTCTTTGCTTAGGTTGGCAAAGCAGCAGCTCTTTGCAGCACGTAAGAAAGGCGTCTaGCAAGCCATCCGCGGTGTC +
Preference number: 5 (lower is better)
Translates to: REAVFSLLRLAKQQLFAARKKGV*QAIRGV
Trigger: GACACCGCGGATGGCTTGCAAGACGCCTTTCTTACG...TGCTGCAAAGAGCTGCTGCTTTGCCAACCTAAGCAAAGAAAATACGGCTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CAA 90 bp GTGCACGGCACAACTCGAGTGGGTACCAGTCACCTGGACTGGGGTGCAGTACACATGCACATCTCGCTCTaGAATAAAAAGAACGTAAGA +
Preference number: 5 (lower is better)
Translates to: VHGTTRVGTSHLDWGAVHMHISL*NKKNVR
Trigger: TCTTACGTTCTTTTTATTCAAGAGCGAGATGTGCAT...GTGTACTGCACCCCAGTCCAGGTGACTGGTACCCACTCGAGTTGTGCCGTGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CAA 90 bp ACCTACCCAAAACACACTGGTTCGGTCAAGCCCCTCTGGAGTGTGAAAGCAAGACAGCCACTTCTGCAATaGCCTCTTGTACTCTACTGC +
Preference number: 5 (lower is better)
Translates to: TYPKHTGSVKPLWSVKARQPLLQ*PLVLYC
Trigger: GCAGTAGAGTACAAGAGGCAATTGCAGAAGTGGCTG...TCTTGCTTTCACACTCCAGAGGGGCTTGACCGAACCAGTGTGTTTTGGGTAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CAA 90 bp GGGTACCAGTCACCTGGACTGGGGTGCAGTACACAATCTGTGTGCAGTACAGAACTTAGGTTTGCCCAGTaGTTCACCATTGTAGTGACC +
Preference number: 5 (lower is better)
Translates to: GYQSPGLGCSTQSVCSTELRFAQ*FTIVVT
Trigger: GGTCACTACAATGGTGAACAACTGGGCAAACCTAAG...TTCTGTACTGCACACAGATTGTGTACTGCACCCCAGTCCAGGTGACTGGTACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CAA 90 bp GGGGTGCAGTACACAATCTGTGTGCAGTACAGAAAGCCCTCATCAGCTGTGGCCTGTTTCATGGCAGACTaGGTAAAATGTCTGGCAAGG +
Preference number: 5 (lower is better)
Translates to: GVQYTICVQYRKPSSAVACFMAD*VKCLAR
Trigger: CCTTGCCAGACATTTTACCAAGTCTGCCATGAAACA...GGCCACAGCTGATGAGGGCTTTCTGTACTGCACACAGATTGTGTACTGCACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CAA 90 bp TATTCCCTGCCTCCCCTAAATGGCCTTTGCCCACAGTCCAGCACTGTGGGGAATTGTTTCATGGCAGACTaGGTAAAATGTCTGGCAAGG +
Preference number: 5 (lower is better)
Translates to: YSLPPLNGLCPQSSTVGNCFMAD*VKCLAR
Trigger: CCTTGCCAGACATTTTACCAAGTCTGCCATGAAACA...ATTCCCCACAGTGCTGGACTGTGGGCAAAGGCCATTTAGGGGAGGCAGGGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS TCA 90 bp TCAACTCTTGAGCCAGAAGCTGGTACCTACAAGGAACTCATCTCATaGCCTTCATTTGCCAGCAGTGCCACACGTTACCTACAGCACCAC +
Preference number: 5 (lower is better)
Translates to: STLEPEAGTYKELIS*PSFASSATRYLQHH
Trigger: GTGGTGCTGTAGGTAACGTGTGGCACTGCTGGCAAATGAAGGTCATGAGATGAGTTCCTTGTAGGTACCAGCTTCTGGCTCAAGAGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS GCA 90 bp CTGTTTCATAACATAAAACTTCAGGACTCAGCTATCAGTTTCGGGTaGAGAATGTCCATACAACAGGGGAGCCGCTGCTGCCCTAGCAGC +
Preference number: 5 (lower is better)
Translates to: LFHNIKLQDSAISFG*RMSIQQGSRCCPSS
Trigger: GCTGCTAGGGCAGCAGCGGCTCCCCTGTTGTATGGACATTCTGCACCCGAAACTGATAGCTGAGTCCTGAAGTTTTATGTTATGAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CAA 90 bp TATTCCCTGCCTCCCCTAAATGGCCTTTGCCCACAGTCCAGCACTGTGGGGAATGATAAGAAACATCTATaGTACCAAGGGTCAGTGCAG +
Preference number: 5 (lower is better)
Translates to: YSLPPLNGLCPQSSTVGNDKKHL*YQGSVQ
Trigger: CTGCACTGACCCTTGGTACAATAGATGTTTCTTATC...ATTCCCCACAGTGCTGGACTGTGGGCAAAGGCCATTTAGGGGAGGCAGGGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CAA 90 bp GGGGTGCAGTACACAATCTGTGTGCAGTACAGAAAGCCCTCATCAGCTGTGGCCCTGAAGATTGGGATGTaGAGATTATTGCCTGAAGCA +
Preference number: 5 (lower is better)
Translates to: GVQYTICVQYRKPSSAVALKIGM*RLLPEA
Trigger: TGCTTCAGGCAATAATCTCAACATCCCAATCTTCAG...GGCCACAGCTGATGAGGGCTTTCTGTACTGCACACAGATTGTGTACTGCACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CAA 90 bp TCAGCACTACATGAAAGCGGCCCCCTGCCCCTCATGCAGAGAATCTCTGCTGGAATAATGGCACAGGACTaGCTAGCAGTGAATAGAATA +
Preference number: 5 (lower is better)
Translates to: SALHESGPLPLMQRISAGIMAQD*LAVNRI
Trigger: TATTCTATTCACTGCTAGCAAGTCCTGTGCCATTAT...TCCAGCAGAGATTCTCTGCATGAGGGGCAGGGGGCCGCTTTCATGTAGTGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS GCA 90 bp GCCAGAAGCTGGTACCTACAAGGAACTCATCTCATGACCTTCATTTaGCAGCAGTGCCACACGTTACCTACAGCACCACAAAACTCAGAA +
Preference number: 5 (lower is better)
Translates to: ARSWYLQGTHLMTFI*QQCHTLPTAPQNSE
Trigger: TTCTGAGTTTTGTGGTGCTGTAGGTAACGTGTGGCACTGCTGGCAAATGAAGGTCATGAGATGAGTTCCTTGTAGGTACCAGCTTCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS CCA 90 bp ATGCCCATGGAGCAAAGCTCTATAGAGAACATCTTTCCGTCCATCTaGTGTTTCATCGAGCCTTCGTCGTATGAAGAAGCCCCCAAGCTT +
Preference number: 5 (lower is better)
Translates to: MPMEQSSIENIFPSI*CFIEPSSYEEAPKL
Trigger: AAGCTTGGGGGCTTCTTCATACGACGAAGGCTCGATGAAACACCAGATGGACGGAAAGATGTTCTCTATAGAGCTTTGCTCCATGGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348367.9
ENST00000369425.5
CDS-3UTR CAA 90 bp GGCAAGTGGACAGAGGACTTTCTCTGGAGAGCCAGTAACGTGAGAAGATGGCCAGTATTTGTGCAACTTTaGCAGATACTCAGGTTCTGG +
Preference number: 5 (lower is better)
Translates to: GKWTEDFLWRASNVRRWPVFVQL*QILRFW
Trigger: CCAGAACCTGAGTATCTGCAAAAGTTGCACAAATAC...TGGCCATCTTCTCACGTTACTGGCTCTCCAGAGAAAGTCCTCTGTCCACTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CAA 90 bp GGCAAGTGGACAGAGGACTTTCTCTGGAGAGCCAGTAACGTGAGAAGATGGCCAGAGTTCTCAGATGACTaGCTGTTAAACCTACTTTGC +
Preference number: 5 (lower is better)
Translates to: GKWTEDFLWRASNVRRWPEFSDD*LLNLLC
Trigger: GCAAAGTAGGTTTAACAGCAAGTCATCTGAGAACTC...TGGCCATCTTCTCACGTTACTGGCTCTCCAGAGAAAGTCCTCTGTCCACTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CAA 90 bp TCACATCAGCACTACATGAAAGCGGCCCCCTGCCCCTCATGCAGAGAATCTCTGTCAACCTGTAGCACCTaGAAACATATTGATACCAGT +
Preference number: 5 (lower is better)
Translates to: SHQHYMKAAPCPSCRESLSTCST*KHIDTS
Trigger: ACTGGTATCAATATGTTTCAAGGTGCTACAGGTTGA...CAGAGATTCTCTGCATGAGGGGCAGGGGGCCGCTTTCATGTAGTGCTGATGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS GCA 90 bp CTGTTTCATAACATAAAACTTCAGGACTCAGCTATCAGTTTCGGGTaGAGAATGTCCATACAACAGGGGAGCCGCTGCTGCCTGTATCCT +
Preference number: 5 (lower is better)
Translates to: LFHNIKLQDSAISFG*RMSIQQGSRCCLYP
Trigger: AGGATACAGGCAGCAGCGGCTCCCCTGTTGTATGGACATTCTGCACCCGAAACTGATAGCTGAGTCCTGAAGTTTTATGTTATGAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480130.5
CDS-3UTR CAA 90 bp ACCCAGTGGTACACAGATGATTGTACATCAGTGGAACCAGAGAAAGCACAGGCCATGTCTGGGATGACATaGGTAGACAGAGTATCTACC +
Preference number: 5 (lower is better)
Translates to: TQWYTDDCTSVEPEKAQAMSGMT*VDRVST
Trigger: GGTAGATACTCTGTCTACCAATGTCATCCCAGACAT...GGCCTGTGCTTTCTCTGGTTCCACTGATGTACAATCATCTGTGTACCACTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CAA 90 bp ACACAAGGCAAGTGGACAGAGGACTTTCTCTGGAGAGCCAGTAACGTGAGAAGATATGCTCAGCCAGATTaGCAATCAACCTCCTTCGTA +
Preference number: 5 (lower is better)
Translates to: TQGKWTEDFLWRASNVRRYAQPD*QSTSFV
Trigger: TACGAAGGAGGTTGATTGCAAATCTGGCTGAGCATA...TCTTCTCACGTTACTGGCTCTCCAGAGAAAGTCCTCTGTCCACTTGCCTTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CAA 90 bp TTCCAGAAGGAAGACTCGAAGCCATCTCAGTTAACAGTTCTACACATTTCCCACGGAGGGAGAAGGCACTaGTCTTCCAGGAGATCACTT +
Preference number: 5 (lower is better)
Translates to: FQKEDSKPSQLTVLHISHGGRRH*SSRRSL
Trigger: AAGTGATCTCCTGGAAGACAAGTGCCTTCTCCCTCC...GTGGGAAATGTGTAGAACTGTTAACTGAGATGGCTTCGAGTCTTCCTTCTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS TCA 90 bp CAAGATGTCTGGGATGACATTGGTAGACAGAGTATCTACCACAACTaGCAAAAGTCCTGCCCGAGCACAAGAGGTTTTTCCACTCCTAGA +
Preference number: 5 (lower is better)
Translates to: QDVWDDIGRQSIYHN*QKSCPSTRGFSTPR
Trigger: TCTAGGAGTGGAAAAACCTCTTGTGCTCGGGCAGGACTTTTGTCAGTTGTGGTAGATACTCTGTCTACCAATGTCATCCCAGACATCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348367.9
ENST00000369425.5
CDS CCA 90 bp GTCACTGTCTTCATCTTCTTCATCACTTCTCCAAGACAAAGGTTCTaGAAGCTTCTTGTCCCACTGCTGCTCAGCAAGACTAGGACTGAT +
Preference number: 5 (lower is better)
Translates to: VTVFIFFITSPRQRF*KLLVPLLLSKTRTD
Trigger: ATCAGTCCTAGTCTTGCTGAGCAGCAGTGGGACAAGAAGCTTCCAGAACCTTTGTCTTGGAGAAGTGATGAAGAAGATGAAGACAGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348367.9
ENST00000369425.5
CDS-3UTR CAA 90 bp GGCAAGTGGACAGAGGACTTTCTCTGGAGAGCCAGTAACGTGAGAAGATGGCCAATGCACATCTCGCTCTaGAATAAAAAGAACGTAAGA +
Preference number: 5 (lower is better)
Translates to: GKWTEDFLWRASNVRRWPMHISL*NKKNVR
Trigger: TCTTACGTTCTTTTTATTCAAGAGCGAGATGTGCAT...TGGCCATCTTCTCACGTTACTGGCTCTCCAGAGAAAGTCCTCTGTCCACTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CAA 90 bp CCCCTGCCCCTCATGCAGAGAATCTCTGCTGGAAACAACTGCTGGCTTTCAAACAGTGGCAACCATTTCTaGAAGAATCCTTTTAGCTTT +
Preference number: 5 (lower is better)
Translates to: PLPLMQRISAGNNCWLSNSGNHF*KNPFSF
Trigger: AAAGCTAAAAGGATTCTTCAAGAAATGGTTGCCACT...GTTTGAAAGCCAGCAGTTGTTTCCAGCAGAGATTCTCTGCATGAGGGGCAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CAA 90 bp ACCAATGGGAGACCACCAAGATTATCTCACTCCTTCTGCAGCACCTATTCCCTGGCAATGTATGGTGCTTaGATGTTATGGCAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: TNGRPPRLSHSFCSTYSLAMYGA*MLWQKR
Trigger: TCTCTTCTGCCATAACATCAAAGCACCATACATTGC...CAGGGAATAGGTGCTGCAGAAGGAGTGAGATAATCTTGGTGGTCTCCCATTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CAA 90 bp ACCAATGGGAGACCACCAAGATTATCTCACTCCTTCTGCAGCACCTATTCCCTGCTGAAGATTGGGATGTaGAGATTATTGCCTGAAGCA +
Preference number: 5 (lower is better)
Translates to: TNGRPPRLSHSFCSTYSLLKIGM*RLLPEA
Trigger: TGCTTCAGGCAATAATCTCAACATCCCAATCTTCAG...CAGGGAATAGGTGCTGCAGAAGGAGTGAGATAATCTTGGTGGTCTCCCATTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CAA 90 bp ACCAATGGGAGACCACCAAGATTATCTCACTCCTTCTGCAGCACCTATTCCCTGTCTGGTCCCAACATTTaGGATAAGGGATATTCAACC +
Preference number: 5 (lower is better)
Translates to: TNGRPPRLSHSFCSTYSLSGPNI*DKGYST
Trigger: GGTTGAATATCCCTTATCCAAAATGTTGGGACCAGA...CAGGGAATAGGTGCTGCAGAAGGAGTGAGATAATCTTGGTGGTCTCCCATTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CAA 90 bp AGAGAAGCCGTATTTTCTTTGCTTAGGTTGGCAAAGCAGCAGCTCTTTGCAGCATTCTGCAATTGCCTCTaGTACTCTACTGCTGTTCAG +
Preference number: 5 (lower is better)
Translates to: REAVFSLLRLAKQQLFAAFCNCL*YSTAVQ
Trigger: CTGAACAGCAGTAGAGTACAAGAGGCAATTGCAGAA...TGCTGCAAAGAGCTGCTGCTTTGCCAACCTAAGCAAAGAAAATACGGCTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS TCA 90 bp GGTAACAACGCTTGCTCCAGGGAAAGTAGAGCAGACACCGGTTTCTaGCTTTGGCTTTCTAAATATTCCTTTAAGGAAAATGGCTGTGCA +
Preference number: 5 (lower is better)
Translates to: GNNACSRESRADTGF*LWLSKYSFKENGCA
Trigger: TGCACAGCCATTTTCCTTAAAGGAATATTTAGAAAGCCAAAGTCAGAAACCGGTGTCTGCTCTACTTTCCCTGGAGCAAGCGTTGTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348367.9
ENST00000369425.5
CDS-3UTR CAA 90 bp AGAGAAGCCGTATTTTCTTTGCTTAGGTTGGCAAAGCAGCAGCTCTTTGCAGCAACATTTTCAGTCACATaGGTGGCAAACATGCCCTTA +
Preference number: 5 (lower is better)
Translates to: REAVFSLLRLAKQQLFAATFSVT*VANMPL
Trigger: TAAGGGCATGTTTGCCACCAATGTGACTGAAAATGT...TGCTGCAAAGAGCTGCTGCTTTGCCAACCTAAGCAAAGAAAATACGGCTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CAA 90 bp TTGCAGATACTCAGGTTCTGGAACAGGACCACTGAAGTTGTGAACAAAGATGGCGGGATGTTGAGATTATaGCCTGAAGCAATGTATGGT +
Preference number: 5 (lower is better)
Translates to: LQILRFWNRTTEVVNKDGGMLRL*PEAMYG
Trigger: ACCATACATTGCTTCAGGCAATAATCTCAACATCCC...GCCATCTTTGTTCACAACTTCAGTGGTCCTGTTCCAGAACCTGAGTATCTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CAA 90 bp CACCATTTCTATAAAACACTGATGAACATCTCACAGAGCACTCATATTACATGGCTGGTGCTCCTTGGATaGGCTCACCTTCAGGTAGCA +
Preference number: 5 (lower is better)
Translates to: HHFYKTLMNISQSTHITWLVLLG*AHLQVA
Trigger: TGCTACCTGAAGGTGAGCCAATCCAAGGAGCACCAG...CCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGTTTTATAGAAATGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CAA 90 bp CACCATTTCTATAAAACACTGATGAACATCTCACAGAGCACTCATATTACATGGAACTGCTGGTGCTCCTaGGATTGGCTCACCTTCAGG +
Preference number: 5 (lower is better)
Translates to: HHFYKTLMNISQSTHITWNCWCS*DWLTFR
Trigger: CCTGAAGGTGAGCCAATCCAAGGAGCACCAGCAGTT...CCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGTTTTATAGAAATGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS GCA 90 bp TGGTACCTACAAGGAACTCATCTCATGACCTTCATTTGCCAGCAGTaGCACACGTTACCTACAGCACCACAAAACTCAGAATATATTCTA +
Preference number: 5 (lower is better)
Translates to: WYLQGTHLMTFICQQ*HTLPTAPQNSEYIL
Trigger: TAGAATATATTCTGAGTTTTGTGGTGCTGTAGGTAACGTGTGGCACTGCTGGCAAATGAAGGTCATGAGATGAGTTCCTTGTAGGTACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CAA 90 bp GCTAGCAAATCATACATTGCATTCCCCAAAGCATCTGAACGTACTTCTAGAAAACAGCCACTTCTGCAATaGCCTCTTGTACTCTACTGC +
Preference number: 5 (lower is better)
Translates to: ASKSYIAFPKASERTSRKQPLLQ*PLVLYC
Trigger: GCAGTAGAGTACAAGAGGCAATTGCAGAAGTGGCTG...TTTTCTAGAAGTACGTTCAGATGCTTTGGGGAATGCAATGTATGATTTGCTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CAA 90 bp CACCATTTCTATAAAACACTGATGAACATCTCACAGAGCACTCATATTACATGGCATATACTGGACAGGTaGTGCACGGCACAACTCGAG +
Preference number: 5 (lower is better)
Translates to: HHFYKTLMNISQSTHITWHILDR*CTAQLE
Trigger: CTCGAGTTGTGCCGTGCACAACCTGTCCAGTATATG...CCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGTTTTATAGAAATGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CAA 90 bp TTCCAGAAGGAAGACTCGAAGCCATCTCAGTTAACAGTTCTACACATTTCCCACAACAGACACTCTCTTTaGTTTGGTCTCCTTGAAAAC +
Preference number: 5 (lower is better)
Translates to: FQKEDSKPSQLTVLHISHNRHSL*FGLLEN
Trigger: GTTTTCAAGGAGACCAAACAAAAGAGAGTGTCTGTT...GTGGGAAATGTGTAGAACTGTTAACTGAGATGGCTTCGAGTCTTCCTTCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CAA 90 bp TTGAACATCAATATGATGCTCAAAAGACATGCTCATCAGAGCATTTTGGGTTTTCACCCCATTCCTCACTaGTGTGCTTACATCGACCAA +
Preference number: 5 (lower is better)
Translates to: LNINMMLKRHAHQSILGFHPIPH*CAYIDQ
Trigger: TTGGTCGATGTAAGCACACAAGTGAGGAATGGGGTG...AAAACCCAAAATGCTCTGATGAGCATGTCTTTTGAGCATCATATTGATGTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CAA 90 bp TCAAGTAGTTTCAGCTCCAAACTACAACTGTATAAAATAGTACTCCCACCCCAATTCTGCAATTGCCTCTaGTACTCTACTGCTGTTCAG +
Preference number: 5 (lower is better)
Translates to: SSSFSSKLQLYKIVLPPQFCNCL*YSTAVQ
Trigger: CTGAACAGCAGTAGAGTACAAGAGGCAATTGCAGAA...TTGGGGTGGGAGTACTATTTTATACAGTTGTAGTTTGGAGCTGAAACTACTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CAA 90 bp GCTAGCAAATCATACATTGCATTCCCCAAAGCATCTGAACGTACTTCTAGAAAATATGCTCAGCCAGATTaGCAATCAACCTCCTTCGTA +
Preference number: 5 (lower is better)
Translates to: ASKSYIAFPKASERTSRKYAQPD*QSTSFV
Trigger: TACGAAGGAGGTTGATTGCAAATCTGGCTGAGCATA...TTTTCTAGAAGTACGTTCAGATGCTTTGGGGAATGCAATGTATGATTTGCTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CAA 90 bp CACCATTTCTATAAAACACTGATGAACATCTCACAGAGCACTCATATTACATGGAAGCGAGTCCCAATCTaGAATAATGGTGAGCTTGAG +
Preference number: 5 (lower is better)
Translates to: HHFYKTLMNISQSTHITWKRVPI*NNGELE
Trigger: CTCAAGCTCACCATTATTCAAGATTGGGACTCGCTT...CCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGTTTTATAGAAATGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CAA 90 bp CACCATTTCTATAAAACACTGATGAACATCTCACAGAGCACTCATATTACATGGGAAGCCGTATTTTCTTaGCTTAGGTTGGCAAAGCAG +
Preference number: 5 (lower is better)
Translates to: HHFYKTLMNISQSTHITWEAVFS*LRLAKQ
Trigger: CTGCTTTGCCAACCTAAGCAAAGAAAATACGGCTTC...CCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGTTTTATAGAAATGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CAA 90 bp CACCATTTCTATAAAACACTGATGAACATCTCACAGAGCACTCATATTACATGGAAAAAGCCAGGATCATaGGGGCTGTTCTCTCTATCA +
Preference number: 5 (lower is better)
Translates to: HHFYKTLMNISQSTHITWKKPGS*GLFSLS
Trigger: TGATAGAGAGAACAGCCCCAATGATCCTGGCTTTTT...CCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGTTTTATAGAAATGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CAA 90 bp TCAAGTAGTTTCAGCTCCAAACTACAACTGTATAAAATAGTACTCCCACCCCAAGCTGTTAAACCTACTTaGCTTACACCTACTTTGTCC +
Preference number: 5 (lower is better)
Translates to: SSSFSSKLQLYKIVLPPQAVKPT*LTPTLS
Trigger: GGACAAAGTAGGTGTAAGCAAAGTAGGTTTAACAGC...TTGGGGTGGGAGTACTATTTTATACAGTTGTAGTTTGGAGCTGAAACTACTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369425.5
CDS-3UTR CAA 90 bp CACCATTTCTATAAAACACTGATGAACATCTCACAGAGCACTCATATTACATGGGTATTTGTGCAACTTTaGCAGATACTCAGGTTCTGG +
Preference number: 5 (lower is better)
Translates to: HHFYKTLMNISQSTHITWVFVQL*QILRFW
Trigger: CCAGAACCTGAGTATCTGCAAAAGTTGCACAAATAC...CCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGTTTTATAGAAATGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS CCA 90 bp AATATGTGGCACTCTCAGCATATACTGCAACATTTCTTTCTGTTCTaGTTATTAGGTATTTGTGCAACTTTTGCAGATACTCAGGTTCTG +
Preference number: 5 (lower is better)
Translates to: NMWHSQHILQHFFLF*LLGICATFADTQVL
Trigger: CAGAACCTGAGTATCTGCAAAAGTTGCACAAATACCTAATAACCAGAACAGAAAGAAATGTTGCAGTATATGCTGAGAGTGCCACATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CAA 90 bp CACCAGTTAATTACAAAAAGCATGCATATTTATCCTCACAGTGAGTTAAGTGGTGCAATGTATGGTGCTTaGATGTTATGGCAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: HQLITKSMHIYPHSELSGAMYGA*MLWQKR
Trigger: TCTCTTCTGCCATAACATCAAAGCACCATACATTGC...ACCACTTAACTCACTGTGAGGATAAATATGCATGCTTTTTGTAATTAACTGGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CAA 90 bp CACCAGTTAATTACAAAAAGCATGCATATTTATCCTCACAGTGAGTTAAGTGGTGGGATGTTGAGATTATaGCCTGAAGCAATGTATGGT +
Preference number: 5 (lower is better)
Translates to: HQLITKSMHIYPHSELSGGMLRL*PEAMYG
Trigger: ACCATACATTGCTTCAGGCAATAATCTCAACATCCC...ACCACTTAACTCACTGTGAGGATAAATATGCATGCTTTTTGTAATTAACTGGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CAA 90 bp TTAATACCTTCCATCAAGACATTTCAGAGCTCTAGACGTTTAGAAATAAGGTCAAGACTAGTGAAATGTTaGCTTCCCCAGATAAGGAAC +
Preference number: 5 (lower is better)
Translates to: LIPSIKTFQSSRRLEIRSRLVKC*LPQIRN
Trigger: GTTCCTTATCTGGGGAAGCAAACATTTCACTAGTCT...TGACCTTATTTCTAAACGTCTAGAGCTCTGAAATGTCTTGATGGAAGGTATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CAA 90 bp CACCATTTCTATAAAACACTGATGAACATCTCACAGAGCACTCATATTACATGGAGTGGCAACCATTTCTaGAAGAATCCTTTTAGCTTT +
Preference number: 5 (lower is better)
Translates to: HHFYKTLMNISQSTHITWSGNHF*KNPFSF
Trigger: AAAGCTAAAAGGATTCTTCAAGAAATGGTTGCCACT...CCATGTAATATGAGTGCTCTGTGAGATGTTCATCAGTGTTTTATAGAAATGGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CAA 90 bp TTAATACCTTCCATCAAGACATTTCAGAGCTCTAGACGTTTAGAAATAAGGTCAATAATGGCACAGGACTaGCTAGCAGTGAATAGAATA +
Preference number: 5 (lower is better)
Translates to: LIPSIKTFQSSRRLEIRSIMAQD*LAVNRI
Trigger: TATTCTATTCACTGCTAGCAAGTCCTGTGCCATTAT...TGACCTTATTTCTAAACGTCTAGAGCTCTGAAATGTCTTGATGGAAGGTATTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CAA 90 bp CACCAGTTAATTACAAAAAGCATGCATATTTATCCTCACAGTGAGTTAAGTGGTAAAACTGCTATTTGGTaGGAGGATTTCCAAGAAACA +
Preference number: 5 (lower is better)
Translates to: HQLITKSMHIYPHSELSGKTAIW*EDFQET
Trigger: TGTTTCTTGGAAATCCTCCAACCAAATAGCAGTTTT...ACCACTTAACTCACTGTGAGGATAAATATGCATGCTTTTTGTAATTAACTGGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS-3UTR CAA 90 bp CACCAGTTAATTACAAAAAGCATGCATATTTATCCTCACAGTGAGTTAAGTGGTTTACAAGCACCTAGTTaGTTTAACCTTATGTGGAAG +
Preference number: 5 (lower is better)
Translates to: HQLITKSMHIYPHSELSGLQAPS*FNLMWK
Trigger: CTTCCACATAAGGTTAAACAAACTAGGTGCTTGTAA...ACCACTTAACTCACTGTGAGGATAAATATGCATGCTTTTTGTAATTAACTGGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS CAA 90 bp AGGCTGTGGGTGAATAAGCAAGGTCTGGTTCCTCTGGGTGCCTGTTaGCACGGCCAGAGGCTGACAGACTTTGGGTGCTCCACAGTAACC +
Preference number: 6 (lower is better)
Translates to: RLWVNKQGLVPLGAC*HGQRLTDFGCSTVT
Trigger: GGTTACTGTGGAGCACCCAAAGTCTGTCAGCCTCTGGCCGTGCAAACAGGCACCCAGAGGAACCAGACCTTGCTTATTCACCCACAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480130.5
CDS CCA 72 bp GCTGATGGAGACTCTGGAGAAGACAGTCCCAGGCTGTaGGTGAATAAGCAAGGTCTGGTTCCTCTGGGTGCC +
Preference number: 6 (lower is better)
Translates to: ADGDSGEDSPRL*VNKQGLVPLGA
Trigger: GGCACCCAGAGGAACCAGACCTTGCTTATTCACCCACAGCCTGGGACTGTCTTCTCCAGAGTCTCCATCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480130.5
CDS TCA 72 bp ATGGAGACTCTGGAGAAGACAGTCCCAGGCTGTGGGTaGATAAGCAAGGTCTGGTTCCTCTGGGTGCCTGTT +
Preference number: 6 (lower is better)
Translates to: METLEKTVPGCG*ISKVWFLWVPV
Trigger: AACAGGCACCCAGAGGAACCAGACCTTGCTTATTCACCCACAGCCTGGGACTGTCTTCTCCAGAGTCTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480130.5
CDS TCA 72 bp GAGCCAGAAGCTGGTACCTACAAGGAACTCATCTCATaGCCTTCATTTGCCAGCAGTGCCACACGTTACCTA +
Preference number: 6 (lower is better)
Translates to: EPEAGTYKELIS*PSFASSATRYL
Trigger: TAGGTAACGTGTGGCACTGCTGGCAAATGAAGGTCATGAGATGAGTTCCTTGTAGGTACCAGCTTCTGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS GCA 72 bp AACATAAAACTTCAGGACTCAGCTATCAGTTTCGGGTaGAGAATGTCCATACAACAGGGGAGCCGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: NIKLQDSAISFG*RMSIQQGSRCC
Trigger: GCAGCAGCGGCTCCCCTGTTGTATGGACATTCTGCACCCGAAACTGATAGCTGAGTCCTGAAGTTTTATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348367.9
ENST00000369425.5
ENST00000480130.5
ENST00000498541.1
CDS CAA 72 bp CTGGTACCTACAAGGAACTCATCTCATGACCTTCATTaGCCAGCAGTGCCACACGTTACCTACAGCACCACA +
Preference number: 6 (lower is better)
Translates to: LVPTRNSSHDLH*PAVPHVTYSTT
Trigger: TGTGGTGCTGTAGGTAACGTGTGGCACTGCTGGCAAATGAAGGTCATGAGATGAGTTCCTTGTAGGTACCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS CAA 90 bp AGCCAGAAGCTGGTACCTACAAGGAACTCATCTCATGACCTTCATTaGCCAGCAGTGCCACACGTTACCTACAGCACCACAAAACTCAGA +
Preference number: 6 (lower is better)
Translates to: SQKLVPTRNSSHDLH*PAVPHVTYSTTKLR
Trigger: TCTGAGTTTTGTGGTGCTGTAGGTAACGTGTGGCACTGCTGGCAAATGAAGGTCATGAGATGAGTTCCTTGTAGGTACCAGCTTCTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS GCA 72 bp TGGTACCTACAAGGAACTCATCTCATGACCTTCATTTaGCAGCAGTGCCACACGTTACCTACAGCACCACAA +
Preference number: 6 (lower is better)
Translates to: WYLQGTHLMTFI*QQCHTLPTAPQ
Trigger: TTGTGGTGCTGTAGGTAACGTGTGGCACTGCTGGCAAATGAAGGTCATGAGATGAGTTCCTTGTAGGTACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348367.9
CDS CAA 90 bp TTCAGTCACATTGGTGGCAAACATGCCCTTATGCACATCTCGCTCTaGAATAAAAAGAACGTAAGAAAGGCGTCTTGCAAGCCATCCGCG +
Preference number: 6 (lower is better)
Translates to: FSHIGGKHALMHISL*NKKNVRKASCKPSA
Trigger: CGCGGATGGCTTGCAAGACGCCTTTCTTACGTTCTTTTTATTCAAGAGCGAGATGTGCATAAGGGCATGTTTGCCACCAATGTGACTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348367.9
ENST00000369425.5
CDS CAA 90 bp TCATCTTCTTCATCACTTCTCCAAGACAAAGGTTCTGGAAGCTTCTaGTCCCACTGCTGCTCAGCAAGACTAGGACTGATATCTTCCTGG +
Preference number: 6 (lower is better)
Translates to: SSSSSLLQDKGSGSF*SHCCSARLGLISSW
Trigger: CCAGGAAGATATCAGTCCTAGTCTTGCTGAGCAGCAGTGGGACAAGAAGCTTCCAGAACCTTTGTCTTGGAGAAGTGATGAAGAAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348367.9
ENST00000369425.5
CDS TCA 72 bp TGGGATGACATTGGTAGACAGAGTATCTACCACAACTaGCAAAAGTCCTGCCCGAGCACAAGAGGTTTTTCC +
Preference number: 6 (lower is better)
Translates to: WDDIGRQSIYHN*QKSCPSTRGFS
Trigger: GGAAAAACCTCTTGTGCTCGGGCAGGACTTTTGTCAGTTGTGGTAGATACTCTGTCTACCAATGTCATCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348367.9
ENST00000369425.5
CDS CCA 72 bp GAGCAAAGCTCTATAGAGAACATCTTTCCGTCCATCTaGTGTTTCATCGAGCCTTCGTCGTATGAAGAAGCC +
Preference number: 6 (lower is better)
Translates to: EQSSIENIFPSI*CFIEPSSYEEA
Trigger: GGCTTCTTCATACGACGAAGGCTCGATGAAACACCAGATGGACGGAAAGATGTTCTCTATAGAGCTTTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348367.9
ENST00000369425.5
CDS GCA 72 bp CTAGAACGTGTGCCTTCCAGGAAGATCTCCAAGAATTaGTGCTGTCGAAGTAATTCAACTATATGCCCATGG +
Preference number: 6 (lower is better)
Translates to: LERVPSRKISKN*CCRSNSTICPW
Trigger: CCATGGGCATATAGTTGAATTACTTCGACAGCAGCAATTCTTGGAGATCTTCCTGGAAGGCACACGTTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348367.9
ENST00000369425.5
CDS CCA 72 bp TCGAGCCTTCGTCGTATGAAGAAGCCCCCAAGCTTATaGATCAAGGTACTGAAGATTGGGATGTTGAGATTA +
Preference number: 6 (lower is better)
Translates to: SSLRRMKKPPSL*IKVLKIGMLRL
Trigger: TAATCTCAACATCCCAATCTTCAGTACCTTGATCCATAAGCTTGGGGGCTTCTTCATACGACGAAGGCTCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348367.9
ENST00000369425.5
CDS GCA 72 bp TCGCTCTTGAATAAAAAGAACGTAAGAAAGGCGTCTTaGAAGCCATCCGCGGTGTCTTGTGTGAGTTTCATT +
Preference number: 6 (lower is better)
Translates to: SLLNKKNVRKAS*KPSAVSCVSFI
Trigger: AATGAAACTCACACAAGACACCGCGGATGGCTTGCAAGACGCCTTTCTTACGTTCTTTTTATTCAAGAGCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348367.9
ENST00000369425.5
CDS CCA 72 bp TTCTTTTTCACTTTGTTAACGGCTTTTGATTGCTGCTaGGCAGAACCATCAGGGTTTAATTCAGCAGCCACT +
Preference number: 6 (lower is better)
Translates to: FFFTLLTAFDCC*AEPSGFNSAAT
Trigger: AGTGGCTGCTGAATTAAACCCTGATGGTTCTGCCCAGCAGCAATCAAAAGCCGTTAACAAAGTGAAAAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348367.9
ENST00000369425.5
CDS CAA 72 bp ATTGGTGGCAAACATGCCCTTATGCACATCTCGCTCTaGAATAAAAAGAACGTAAGAAAGGCGTCTTGCAAG +
Preference number: 6 (lower is better)
Translates to: IGGKHALMHISL*NKKNVRKASCK
Trigger: CTTGCAAGACGCCTTTCTTACGTTCTTTTTATTCAAGAGCGAGATGTGCATAAGGGCATGTTTGCCACCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348367.9
ENST00000369425.5
CDS CAA 72 bp AACCATCAGGGTTTAATTCAGCAGCCACTTCTGCAATaGCCTCTTGTACTCTACTGCTGTTCAGCACATTTT +
Preference number: 6 (lower is better)
Translates to: NHQGLIQQPLLQ*PLVLYCCSAHF
Trigger: AAAATGTGCTGAACAGCAGTAGAGTACAAGAGGCAATTGCAGAAGTGGCTGCTGAATTAAACCCTGATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348367.9
ENST00000369425.5
CDS TCA 72 bp GCTTGCTCCAGGGAAAGTAGAGCAGACACCGGTTTCTaGCTTTGGCTTTCTAAATATTCCTTTAAGGAAAAT +
Preference number: 6 (lower is better)
Translates to: ACSRESRADTGF*LWLSKYSFKEN
Trigger: ATTTTCCTTAAAGGAATATTTAGAAAGCCAAAGTCAGAAACCGGTGTCTGCTCTACTTTCCCTGGAGCAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348367.9
ENST00000369425.5
CDS CAA 72 bp CCAAGCTTATGGATCAAGGTACTGAAGATTGGGATGTaGAGATTATTGCCTGAAGCAATGTATGGTGCTTTG +
Preference number: 6 (lower is better)
Translates to: PSLWIKVLKIGM*RLLPEAMYGAL
Trigger: CAAAGCACCATACATTGCTTCAGGCAATAATCTCAACATCCCAATCTTCAGTACCTTGATCCATAAGCTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348367.9
ENST00000369425.5
CDS CAA 90 bp CAGAAGCGGCAAATTCGTCTCAGTTGCAGCTTTAACCATCTCAAGTaGACCTTTGTGAATTTGAATGTTCCAAAAGAAGCTGTTGAACAG +
Preference number: 6 (lower is better)
Translates to: QKRQIRLSCSFNHLK*TFVNLNVPKEAVEQ
Trigger: CTGTTCAACAGCTTCTTTTGGAACATTCAAATTCACAAAGGTCAACTTGAGATGGTTAAAGCTGCAACTGAGACGAATTTGCCGCTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348367.9
ENST00000369425.5
CDS TCA 72 bp CAAGGTACTGAAGATTGGGATGTTGAGATTATTGCCTaGAGCAATGTATGGTGCTTTGATGTTATGGCAGAA +
Preference number: 6 (lower is better)
Translates to: QGTEDWDVEIIA*SNVWCFDVMAE
Trigger: TTCTGCCATAACATCAAAGCACCATACATTGCTTCAGGCAATAATCTCAACATCCCAATCTTCAGTACCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348367.9
ENST00000369425.5
CDS GCA 72 bp TGGCAGATAAGAAACATCTATTGTACCAAGGGTCAGTaGAGATTCATCCATGTCACAAAGTGTAATTCCCAA +
Preference number: 6 (lower is better)
Translates to: WQIRNIYCTKGQ*RFIHVTKCNSQ
Trigger: TTGGGAATTACACTTTGTGACATGGATGAATCTGCACTGACCCTTGGTACAATAGATGTTTCTTATCTGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348367.9
ENST00000369425.5
ENST00000480130.5
ENST00000498541.1
CDS GCA 72 bp TTAGCTTTCTTTTTCACTTTGTTAACGGCTTTTGATTaGTGCTGGGCAGAACCATCAGGGTTTAATTCAGCA +
Preference number: 6 (lower is better)
Translates to: LAFFFTLLTAFD*CWAEPSGFNSA
Trigger: TGCTGAATTAAACCCTGATGGTTCTGCCCAGCAGCAATCAAAAGCCGTTAACAAAGTGAAAAAGAAAGCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348367.9
ENST00000369425.5
CDS CAA 72 bp CAAATTCGTCTCAGTTGCAGCTTTAACCATCTCAAGTaGACCTTTGTGAATTTGAATGTTCCAAAAGAAGCT +
Preference number: 6 (lower is better)
Translates to: QIRLSCSFNHLK*TFVNLNVPKEA
Trigger: AGCTTCTTTTGGAACATTCAAATTCACAAAGGTCAACTTGAGATGGTTAAAGCTGCAACTGAGACGAATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348367.9
ENST00000369425.5