RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPALPP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000133114

Ensembl transcript IDs: ENST00000357537.4, ENST00000361121.6, ENST00000379151.9, ENST00000479068.1, ENST00000497558.5, ENST00000611650.1

Found 344 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACTGGATTGAGTATTGGGCTGTGTTTGTCAGATGCAATAACAGAATaGGAGGCTAGGAAGGCAGGTCGGGGGCTGGAGAGAACAGGATCT +
Preference number: 1 (lower is better)
Translates to: TGLSIGLCLSDAITE*EARKAGRGLERTGS
Trigger: AGATCCTGTTCTCTCCAGCCCCCGACCTGCCTTCCTAGCCTCTCATTCTGTTATTGCATCTGACAAACACAGCCCAATACTCAATCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611650.1
3UTR GCA 90 bp GGAATGCAACCAGAGGAAGCCCAGAAGCCTAGAGCGTTAAGGAATTaGGCAGCAACTCAGACTGGATTGAGTATTGGGCTGTGTTTGTCA +
Preference number: 1 (lower is better)
Translates to: GMQPEEAQKPRALRN*AATQTGLSIGLCLS
Trigger: TGACAAACACAGCCCAATACTCAATCCAGTCTGAGTTGCTGCGCAATTCCTTAACGCTCTAGGCTTCTGGGCTTCCTCTGGTTGCATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611650.1
3UTR CCA 90 bp CAGAGCAAGGGCCTAAGAGTGAATTCAGACACATTTGGGCAATTCTaGAAGGCCAGCAGAGTAGACCTTTGGTGTAAGAACCATCTGGCC +
Preference number: 1 (lower is better)
Translates to: QSKGLRVNSDTFGQF*KASRVDLWCKNHLA
Trigger: GGCCAGATGGTTCTTACACCAAAGGTCTACTCTGCTGGCCTTCCAGAATTGCCCAAATGTGTCTGAATTCACTCTTAGGCCCTTGCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR CCA 90 bp TGGTGTAAGAACCATCTGGCCAACTCCAATGTCATGTTTATAACTTaGTTAAGAAGTATTCTCCATTGGAGGCCGGGGGCGGTGGCTCAC +
Preference number: 1 (lower is better)
Translates to: WCKNHLANSNVMFIT*LRSILHWRPGAVAH
Trigger: GTGAGCCACCGCCCCCGGCCTCCAATGGAGAATACTTCTTAACCAAGTTATAAACATGACATTGGAGTTGGCCAGATGGTTCTTACACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR CCA 90 bp TCAGACACATTTGGGCAATTCTGGAAGGCCAGCAGAGTAGACCTTTaGTGTAAGAACCATCTGGCCAACTCCAATGTCATGTTTATAACT +
Preference number: 1 (lower is better)
Translates to: SDTFGQFWKASRVDL*CKNHLANSNVMFIT
Trigger: AGTTATAAACATGACATTGGAGTTGGCCAGATGGTTCTTACACCAAAGGTCTACTCTGCTGGCCTTCCAGAATTGCCCAAATGTGTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR TCA 90 bp TATATAGGCTTCATAGTATCAGTAGACACTATGAAGACCCAACCCTaGACCATCATATTTCTCACAATATACCCGCCATACTGGAGCAGT +
Preference number: 1 (lower is better)
Translates to: YIGFIVSVDTMKTQP*TIIFLTIYPPYWSS
Trigger: ACTGCTCCAGTATGGCGGGTATATTGTGAGAAATATGATGGTTCAGGGTTGGGTCTTCATAGTGTCTACTGATACTATGAAGCCTATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR GCA 90 bp TGGAGCAGTTCCTCAAACACCAAAGAACTAAAGCTTCAGGGCATTTaGATATGTGATCAGTCACTTTTCACACTGCTAGCTTTTCATTTT +
Preference number: 1 (lower is better)
Translates to: WSSSSNTKELKLQGI*ICDQSLFTLLAFHF
Trigger: AAAATGAAAAGCTAGCAGTGTGAAAAGTGACTGATCACATATGCAAATGCCCTGAAGCTTTAGTTCTTTGGTGTTTGAGGAACTGCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR CCA 90 bp TCCTATCATTCAATGCTTAGCTTTGATGTTGCAAAGCATCTCTTTTaGTCACTTTCAATTTGGGAGTTAGAGAGACCAAACCAAACCAAA +
Preference number: 1 (lower is better)
Translates to: SYHSMLSFDVAKHLF*SLSIWELERPNQTK
Trigger: TTTGGTTTGGTTTGGTCTCTCTAACTCCCAAATTGAAAGTGACCAAAAGAGATGCTTTGCAACATCAAAGCTAAGCATTGAATGATAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR CCA 90 bp ATAAATCAATATTCTGAAATAGAAGACTTGGCTGTCGATGTTAATTaGGTGCTATCTCCAACCACTTTCCATCATGTTACTTCTTCCTCT +
Preference number: 1 (lower is better)
Translates to: INQYSEIEDLAVDVN*VLSPTTFHHVTSSS
Trigger: AGAGGAAGAAGTAACATGATGGAAAGTGGTTGGAGATAGCACCCAATTAACATCGACAGCCAAGTCTTCTATTTCAGAATATTGATTTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357537.4
ENST00000497558.5
3UTR TCA 90 bp AAACATATAAGTTCCTCCAGAAATACTTATTATAGGGAAATGATCTaGGAAAGCAAAGGCTCTCTTTTTGACCCTACATGTTCAGATTCC +
Preference number: 1 (lower is better)
Translates to: KHISSSRNTYYREMI*ESKGSLFDPTCSDS
Trigger: GGAATCTGAACATGTAGGGTCAAAAAGAGAGCCTTTGCTTTCTCAGATCATTTCCCTATAATAAGTATTTCTGGAGGAACTTATATGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR GCA 90 bp TCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAAGTATTGCTGGTGCTGCCGAGAGGCGGAGCTTaGAGTGAGCCGAGATGGCGC +
Preference number: 2 (lower is better)
Translates to: SLKRSDNPFFKRQVLLVLPRGGA*SEPRWR
Trigger: GCGCCATCTCGGCTCACTGCAAGCTCCGCCTCTCGG...CAGCACCAGCAATACTTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR TCA 90 bp AGATCATCTATAGCCCACCAGTGCTCCCTTTTTGTGCTCCCTGCCTTTTCAATGGGCAGGAGAATCACTTaGACCTGGAAGGCGGAGGGT +
Preference number: 2 (lower is better)
Translates to: RSSIAHQCSLFVLPAFSMGRRIT*TWKAEG
Trigger: ACCCTCCGCCTTCCAGGTTCAAGTGATTCTCCTGCC...CATTGAAAAGGCAGGGAGCACAAAAAGGGAGCACTGGTGGGCTATAGATGATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR CCA 90 bp AGATCATCTATAGCCCACCAGTGCTCCCTTTTTGTGCTCCCTGCCTTTTCAATGGGAGGCCAAGGCGGATaGATCAACAGGTCAGGAGAT +
Preference number: 2 (lower is better)
Translates to: RSSIAHQCSLFVLPAFSMGGQGG*INRSGD
Trigger: ATCTCCTGACCTGTTGATCCATCCGCCTTGGCCTCC...CATTGAAAAGGCAGGGAGCACAAAAAGGGAGCACTGGTGGGCTATAGATGATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR CCA 90 bp GAATGGCCTGGGATAATTGTTAAAAGTGAAGATGCTCTGATTCTAACCCCAAAGGCTGAGGCAGGAGAATaGCGTGAACCCGAGAGGCGG +
Preference number: 2 (lower is better)
Translates to: EWPGIIVKSEDALILTPKAEAGE*REPERR
Trigger: CCGCCTCTCGGGTTCACGCCATTCTCCTGCCTCAGC...CTTTGGGGTTAGAATCAGAGCATCTTCACTTTTAACAATTATCCCAGGCCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR CCA 90 bp AAGGTAGTAACTCCTGGAAGCAATAGGCGGAAAGCAGAGGTTTCTCTCCTTCATAGATCACCTGAGGTCTaGAGTTCGAGACCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: KVVTPGSNRRKAEVSLLHRSPEV*SSRPAW
Trigger: CCAGGCTGGTCTCGAACTCCAGACCTCAGGTGATCT...ATGAAGGAGAGAAACCTCTGCTTTCCGCCTATTGCTTCCAGGAGTTACTACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497558.5
3UTR-3UTR CCA 90 bp AAGGTAGTAACTCCTGGAAGCAATAGGCGGAAAGCAGAGGTTTCTCTCCTTCATGTAGTCCCAGCTACTTaGGACACTGAGGCAGGAGAA +
Preference number: 2 (lower is better)
Translates to: KVVTPGSNRRKAEVSLLHVVPAT*DTEAGE
Trigger: TTCTCCTGCCTCAGTGTCCCAAGTAGCTGGGACTAC...ATGAAGGAGAGAAACCTCTGCTTTCCGCCTATTGCTTCCAGGAGTTACTACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497558.5
3UTR-3UTR CCA 90 bp AATGCTTTTAGGCATTCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAAAGAAGTATTCTCCATTaGAGGCCGGGGGCGGTGGCT +
Preference number: 2 (lower is better)
Translates to: NAFRHSLKRSDNPFFKRQRSILH*RPGAVA
Trigger: AGCCACCGCCCCCGGCCTCCAATGGAGAATACTTCT...TTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGAATGCCTAAAAGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR TCA 90 bp AGATCATCTATAGCCCACCAGTGCTCCCTTTTTGTGCTCCCTGCCTTTTCAATGGGGCATTTGCATATGTaGTCAGTCACTTTTCACACT +
Preference number: 2 (lower is better)
Translates to: RSSIAHQCSLFVLPAFSMGHLHM*SVTFHT
Trigger: AGTGTGAAAAGTGACTGATCACATATGCAAATGCCC...CATTGAAAAGGCAGGGAGCACAAAAAGGGAGCACTGGTGGGCTATAGATGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR GCA 90 bp GAATGGCCTGGGATAATTGTTAAAAGTGAAGATGCTCTGATTCTAACCCCAAAGGCAGTGAGCCGAGATTaGGCCATTACACTCCAGTCT +
Preference number: 2 (lower is better)
Translates to: EWPGIIVKSEDALILTPKAVSRD*AITLQS
Trigger: AGACTGGAGTGTAATGGCGCAATCTCGGCTCACTGC...CTTTGGGGTTAGAATCAGAGCATCTTCACTTTTAACAATTATCCCAGGCCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR GCA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAATCACCTAGGCTAGAGTaGAGTGGCACGATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKSPRLE*SGTISA
Trigger: AGCCGAGATCGTGCCACTGCACTCTAGCCTAGGTGA...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
3UTR-3UTR GCA 90 bp AAGGTAGTAACTCCTGGAAGCAATAGGCGGAAAGCAGAGGTTTCTCTCCTTCATTTCAAGCAATTATCCTaGTTCAGCCTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: KVVTPGSNRRKAEVSLLHFKQLS*FSLLSS
Trigger: GCTACTCAGGAGGCTGAAGCAGGATAATTGCTTGAA...ATGAAGGAGAGAAACCTCTGCTTTCCGCCTATTGCTTCCAGGAGTTACTACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497558.5
3UTR-3UTR CCA 90 bp AAGGTAGTAACTCCTGGAAGCAATAGGCGGAAAGCAGAGGTTTCTCTCCTTCATGCTGTCGATGTTAATTaGGTGCTATCTCCAACCACT +
Preference number: 2 (lower is better)
Translates to: KVVTPGSNRRKAEVSLLHAVDVN*VLSPTT
Trigger: AGTGGTTGGAGATAGCACCCAATTAACATCGACAGC...ATGAAGGAGAGAAACCTCTGCTTTCCGCCTATTGCTTCCAGGAGTTACTACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497558.5
3UTR-3UTR CCA 90 bp AGATCATCTATAGCCCACCAGTGCTCCCTTTTTGTGCTCCCTGCCTTTTCAATGTTCACCTCCCAGGACTaGGTTAGATGTTCCTATATA +
Preference number: 2 (lower is better)
Translates to: RSSIAHQCSLFVLPAFSMFTSQD*VRCSYI
Trigger: TATATAGGAACATCTAACCCAGTCCTGGGAGGTGAA...CATTGAAAAGGCAGGGAGCACAAAAAGGGAGCACTGGTGGGCTATAGATGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR CCA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAAGCTGCCTTGAATTCCTaGGCTCAAGGGATCCTCCCA +
Preference number: 2 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKAALNS*AQGILP
Trigger: TGGGAGGATCCCTTGAGCCCAGGAATTCAAGGCAGC...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
3UTR-3UTR TCA 90 bp AGGCATTCAGTCTTAAATGGCCCCAAGTCAGCCAGGGACAAGGAACTACAATCTTATAGGGAAATGATCTaGGAAAGCAAAGGCTCTCTT +
Preference number: 2 (lower is better)
Translates to: RHSVLNGPKSARDKELQSYREMI*ESKGSL
Trigger: AAGAGAGCCTTTGCTTTCTCAGATCATTTCCCTATA...AGATTGTAGTTCCTTGTCCCTGGCTGACTTGGGGCCATTTAAGACTGAATGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR GCA 90 bp AGGCATTCAGTCTTAAATGGCCCCAAGTCAGCCAGGGACAAGGAACTACAATCTAAGCTTCAGGGCATTTaGATATGTGATCAGTCACTT +
Preference number: 2 (lower is better)
Translates to: RHSVLNGPKSARDKELQSKLQGI*ICDQSL
Trigger: AAGTGACTGATCACATATGCAAATGCCCTGAAGCTT...AGATTGTAGTTCCTTGTCCCTGGCTGACTTGGGGCCATTTAAGACTGAATGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR TCA 90 bp AGGCATTCAGTCTTAAATGGCCCCAAGTCAGCCAGGGACAAGGAACTACAATCTAGTAGCATGAGCTTTTaGAACTGCAGACTTAAATCT +
Preference number: 2 (lower is better)
Translates to: RHSVLNGPKSARDKELQSSSMSF*NCRLKS
Trigger: AGATTTAAGTCTGCAGTTTCAAAAGCTCATGCTACT...AGATTGTAGTTCCTTGTCCCTGGCTGACTTGGGGCCATTTAAGACTGAATGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR TCA 90 bp AATGCTTTTAGGCATTCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAACTGAGATTACAGGTGTaGGCTACCTTGTCTGCCCAT +
Preference number: 2 (lower is better)
Translates to: NAFRHSLKRSDNPFFKRQLRLQV*ATLSAH
Trigger: ATGGGCAGACAAGGTAGCTCACACCTGTAATCTCAG...TTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGAATGCCTAAAAGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR TCA 90 bp TCCTGCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTTGCATCTTTGGAATTTACAGTAAGGACTTaGCACACTGACTCTAGGGCA +
Preference number: 2 (lower is better)
Translates to: SCQMERRLDSIRPFASLEFTVRT*HTDSRA
Trigger: TGCCCTAGAGTCAGTGTGTCAAGTCCTTACTGTAAA...TTCCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497558.5
3UTR-3UTR TCA 90 bp AAGGTAGTAACTCCTGGAAGCAATAGGCGGAAAGCAGAGGTTTCTCTCCTTCATTCAGAAAGCTTTGGTTaGGATCAGAGATTGAGTCTT +
Preference number: 2 (lower is better)
Translates to: KVVTPGSNRRKAEVSLLHSESFG*DQRLSL
Trigger: AAGACTCAATCTCTGATCTCAACCAAAGCTTTCTGA...ATGAAGGAGAGAAACCTCTGCTTTCCGCCTATTGCTTCCAGGAGTTACTACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497558.5
3UTR-3UTR GCA 90 bp TCTCCTGCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTTGCATCTTTGGTCGATGTTAATTGGGTaGTATCTCCAACCACTTTCC +
Preference number: 2 (lower is better)
Translates to: SPARWKGDLIQLGLLHLWSMLIG*YLQPLS
Trigger: GGAAAGTGGTTGGAGATAGCACCCAATTAACATCGA...CCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497558.5
3UTR-3UTR GCA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAAATCACAGCTCACTGCTaGCTTGAATTCCTGGGCTCA +
Preference number: 2 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKITAHC*LEFLGS
Trigger: TGAGCCCAGGAATTCAAGGCAGCAGTGAGCTGTGAT...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
3UTR-3UTR GCA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAAACAATCACAGCTCACTaGTGCCTTGAATTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKTITAH*CLEFLG
Trigger: GCCCAGGAATTCAAGGCAGCAGTGAGCTGTGATTGT...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
3UTR-3UTR GCA 90 bp TCCTGCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTTGCATCTTTGGAAATAGGTATGAGCCACTaGGCCCAGCTAATTCATCTT +
Preference number: 2 (lower is better)
Translates to: SCQMERRLDSIRPFASLEIGMSH*AQLIHL
Trigger: AAGATGAATTAGCTGGGCGCAGTGGCTCATACCTAT...TTCCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497558.5
3UTR-3UTR GCA 90 bp AATATTCTTGTATTGGGATTAGTCTCTCTGTGGGGCAAAACAACCTCTGAAACTTTGCCCAGGCTGGAATaGAATGGTGTGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: NILVLGLVSLWGKTTSETLPRLE*NGVILA
Trigger: AGCCAAGATCACACCATTGCATTCCAGCCTGGGCAA...AGTTTCAGAGGTTGTTTTGCCCCACAGAGAGACTAATCCCAATACAAGAATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497558.5
3UTR-3UTR CCA 90 bp TTAAATGGCCCCAAGTCAGCCAGGGACAAGGAACTACAATCTGACTATTCCTCTTGGTCACTTTCAATTTaGGAGTTAGAGAGACCAAAC +
Preference number: 2 (lower is better)
Translates to: LNGPKSARDKELQSDYSSWSLSI*ELERPN
Trigger: GTTTGGTCTCTCTAACTCCCAAATTGAAAGTGACCA...AGAGGAATAGTCAGATTGTAGTTCCTTGTCCCTGGCTGACTTGGGGCCATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR CCA 90 bp AATATTCTTGTATTGGGATTAGTCTCTCTGTGGGGCAAAACAACCTCTGAAACTCAGGCTGGAATGCAATaGTGTGATCTTGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: NILVLGLVSLWGKTTSETQAGMQ*CDLGSL
Trigger: CAGTGAGCCAAGATCACACCATTGCATTCCAGCCTG...AGTTTCAGAGGTTGTTTTGCCCCACAGAGAGACTAATCCCAATACAAGAATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497558.5
3UTR-3UTR CCA 90 bp AATGCTTTTAGGCATTCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAAACATTTGGGCAATTCTaGAAGGCCAGCAGAGTAGAC +
Preference number: 2 (lower is better)
Translates to: NAFRHSLKRSDNPFFKRQTFGQF*KASRVD
Trigger: GTCTACTCTGCTGGCCTTCCAGAATTGCCCAAATGT...TTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGAATGCCTAAAAGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR CCA 90 bp GAATGGCCTGGGATAATTGTTAAAAGTGAAGATGCTCTGATTCTAACCCCAAAGGAATTCAGACACATTTaGGCAATTCTGGAAGGCCAG +
Preference number: 2 (lower is better)
Translates to: EWPGIIVKSEDALILTPKEFRHI*AILEGQ
Trigger: CTGGCCTTCCAGAATTGCCCAAATGTGTCTGAATTC...CTTTGGGGTTAGAATCAGAGCATCTTCACTTTTAACAATTATCCCAGGCCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR CCA 90 bp TCCTGCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTTGCATCTTTGGAAGGACTCAGAAAGCTTTaGTTGAGATCAGAGATTGAG +
Preference number: 2 (lower is better)
Translates to: SCQMERRLDSIRPFASLEGLRKL*LRSEIE
Trigger: CTCAATCTCTGATCTCAACCAAAGCTTTCTGAGTCC...TTCCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497558.5
3UTR-3UTR TCA 90 bp GAATGGCCTGGGATAATTGTTAAAAGTGAAGATGCTCTGATTCTAACCCCAAAGATGAAGACCCAACCCTaGACCATCATATTTCTCACA +
Preference number: 2 (lower is better)
Translates to: EWPGIIVKSEDALILTPKMKTQP*TIIFLT
Trigger: TGTGAGAAATATGATGGTTCAGGGTTGGGTCTTCAT...CTTTGGGGTTAGAATCAGAGCATCTTCACTTTTAACAATTATCCCAGGCCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR TCA 90 bp TCCTGCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTTGCATCTTTGGAAAAGGCTATTCATGACTaGTATGACCCCCGTAAATTA +
Preference number: 2 (lower is better)
Translates to: SCQMERRLDSIRPFASLEKAIHD*YDPRKL
Trigger: TAATTTACGGGGGTCATATCAGTCATGAATAGCCTT...TTCCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497558.5
3UTR-3UTR GCA 90 bp AATGCTTTTAGGCATTCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAAAACCCAGTGTCACAGTaGTCTCAAGAACATTTCCAG +
Preference number: 2 (lower is better)
Translates to: NAFRHSLKRSDNPFFKRQNPVSQ*SQEHFQ
Trigger: CTGGAAATGTTCTTGAGAGCACTGTGACACTGGGTT...TTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGAATGCCTAAAAGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR GCA 90 bp CCAGGGACAAGGAACTACAATCTGACTATTCCTCTTAGGGACTTATCTATTTTATCAAGAGGCAAGTATTaGTGGTGCTGGTGTTTGTTG +
Preference number: 2 (lower is better)
Translates to: PGTRNYNLTIPLRDLSILSRGKY*WCWCLL
Trigger: CAACAAACACCAGCACCAGCAATACTTGCCTCTTGA...TAAAATAGATAAGTCCCTAAGAGGAATAGTCAGATTGTAGTTCCTTGTCCCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR CCA 90 bp TCTCCTGCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTTGCATCTTTGGTCCTTTAGTTTGCTATaGTTTACACTGATGCTATGG +
Preference number: 2 (lower is better)
Translates to: SPARWKGDLIQLGLLHLWSFSLL*FTLMLW
Trigger: CCATAGCATCAGTGTAAACCATAGCAAACTAAAGGA...CCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497558.5
3UTR CAA 90 bp CATTCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAAGTATaGCTGGTGCTGGTGTTTGTTGCTATGCAAAGTAAAGTGATTATG +
Preference number: 2 (lower is better)
Translates to: HSLKRSDNPFFKRQV*LVLVFVAMQSKVIM
Trigger: CATAATCACTTTACTTTGCATAGCAACAAACACCAGCACCAGCAATACTTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR TCA 90 bp TCCTGCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTTGCATCTTTGGAAAGTAGCATGAGCTTTTaGAACTGCAGACTTAAATCT +
Preference number: 2 (lower is better)
Translates to: SCQMERRLDSIRPFASLESSMSF*NCRLKS
Trigger: AGATTTAAGTCTGCAGTTTCAAAAGCTCATGCTACT...TTCCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497558.5
3UTR-3UTR TCA 90 bp ACCAAAGAACTAAAGCTTCAGGGCATTTGCATATGTGATCAGTCACTTTTCACAACAGGTCCTGTGATATaGAGAACAATGGAATCTTGG +
Preference number: 2 (lower is better)
Translates to: TKELKLQGICICDQSLFTTGPVI*RTMESW
Trigger: CCAAGATTCCATTGTTCTTCATATCACAGGACCTGT...TGTGAAAAGTGACTGATCACATATGCAAATGCCCTGAAGCTTTAGTTCTTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR TCA 90 bp CCAGGGACAAGGAACTACAATCTGACTATTCCTCTTAGGGACTTATCTATTTTACAAAGGCTCTCTTTTTaGCCCTACATGTTCAGATTC +
Preference number: 2 (lower is better)
Translates to: PGTRNYNLTIPLRDLSILQRLSF*PYMFRF
Trigger: GAATCTGAACATGTAGGGTCAAAAAGAGAGCCTTTG...TAAAATAGATAAGTCCCTAAGAGGAATAGTCAGATTGTAGTTCCTTGTCCCTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR GCA 90 bp AATGCTTTTAGGCATTCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAATCGATGTTAATTGGGTaGTATCTCCAACCACTTTCC +
Preference number: 2 (lower is better)
Translates to: NAFRHSLKRSDNPFFKRQSMLIG*YLQPLS
Trigger: GGAAAGTGGTTGGAGATAGCACCCAATTAACATCGA...TTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGAATGCCTAAAAGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR CCA 90 bp AACCATCTGGCCAACTCCAATGTCATGTTTATAACTTGGTTAAGAAGTATTCTCGCTGTCGATGTTAATTaGGTGCTATCTCCAACCACT +
Preference number: 2 (lower is better)
Translates to: NHLANSNVMFITWLRSILAVDVN*VLSPTT
Trigger: AGTGGTTGGAGATAGCACCCAATTAACATCGACAGC...GAGAATACTTCTTAACCAAGTTATAAACATGACATTGGAGTTGGCCAGATGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR TCA 90 bp AATGCTTTTAGGCATTCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAACTGTTACAGGTCCTGTaGTATGAAGAACAATGGAAT +
Preference number: 2 (lower is better)
Translates to: NAFRHSLKRSDNPFFKRQLLQVL*YEEQWN
Trigger: ATTCCATTGTTCTTCATATCACAGGACCTGTAACAG...TTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGAATGCCTAAAAGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR TCA 90 bp AACCATCTGGCCAACTCCAATGTCATGTTTATAACTTGGTTAAGAAGTATTCTCTGCTTTACTTATCTGTaGATACCCTATAAGGGACCA +
Preference number: 2 (lower is better)
Translates to: NHLANSNVMFITWLRSILCFTYL*IPYKGP
Trigger: TGGTCCCTTATAGGGTATTCACAGATAAGTAAAGCA...GAGAATACTTCTTAACCAAGTTATAAACATGACATTGGAGTTGGCCAGATGGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR TCA 90 bp AACCATCTGGCCAACTCCAATGTCATGTTTATAACTTGGTTAAGAAGTATTCTCAGGTTTCAGCTTAAATaGCACATCTTCAGAGACTTC +
Preference number: 2 (lower is better)
Translates to: NHLANSNVMFITWLRSILRFQLK*HIFRDF
Trigger: GAAGTCTCTGAAGATGTGTCATTTAAGCTGAAACCT...GAGAATACTTCTTAACCAAGTTATAAACATGACATTGGAGTTGGCCAGATGGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR CCA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAATGTCAGATTGGGCTATaGATGAATATTGGAATAGTT +
Preference number: 2 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKCQIGL*MNIGIV
Trigger: AACTATTCCAATATTCATCCATAGCCCAATCTGACA...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
3UTR CCA 72 bp GGTCTCACCATCTTAAGCAGGCTGGTCTCAAACTACTaGGCTCAAGCGATCCTCTCACATTGGCCTCCCAAA +
Preference number: 3 (lower is better)
Translates to: GLTILSRLVSNY*AQAILSHWPPK
Trigger: TTTGGGAGGCCAATGTGAGAGGATCGCTTGAGCCCAGTAGTTTGAGACCAGCCTGCTTAAGATGGTGAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
3UTR-3UTR CAA 90 bp AGATCATCTATAGCCCACCAGTGCTCCCTTTTTGTGCTCCCTGCCTTTTCAATGTTGGCCAGGGTAGCCTaGAACTCCTGGCCTCAAGCA +
Preference number: 3 (lower is better)
Translates to: RSSIAHQCSLFVLPAFSMLARVA*NSWPQA
Trigger: TGCTTGAGGCCAGGAGTTCAAGGCTACCCTGGCCAA...CATTGAAAAGGCAGGGAGCACAAAAAGGGAGCACTGGTGGGCTATAGATGATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR CCA 72 bp CAGAATCTTCTCCCAGGGAGGAAGACTATGCCTGCCTaGTTCACCATTGTGTTCTTAGCACCTAGCATACAC +
Preference number: 3 (lower is better)
Translates to: QNLLPGRKTMPA*FTIVFLAPSIH
Trigger: GTGTATGCTAGGTGCTAAGAACACAATGGTGAACCAGGCAGGCATAGTCTTCCTCCCTGGGAGAAGATTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR CCA 72 bp GCAGAGCAAGGGCCTAAGAGTGAATTCAGACACATTTaGGCAATTCTGGAAGGCCAGCAGAGTAGACCTTTG +
Preference number: 3 (lower is better)
Translates to: AEQGPKSEFRHI*AILEGQQSRPL
Trigger: CAAAGGTCTACTCTGCTGGCCTTCCAGAATTGCCCAAATGTGTCTGAATTCACTCTTAGGCCCTTGCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR GCA 72 bp GAGACCATCCTTTGCAGATCATCTATAGCCCACCAGTaGTCCCTTTTTGTGCTCCCTGCCTTTTCAATGTTC +
Preference number: 3 (lower is better)
Translates to: ETILCRSSIAHQ*SLFVLPAFSMF
Trigger: GAACATTGAAAAGGCAGGGAGCACAAAAAGGGAGCACTGGTGGGCTATAGATGATCTGCAAAGGATGGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR CCA 72 bp TTTGGGCAATTCTGGAAGGCCAGCAGAGTAGACCTTTaGTGTAAGAACCATCTGGCCAACTCCAATGTCATG +
Preference number: 3 (lower is better)
Translates to: FGQFWKASRVDL*CKNHLANSNVM
Trigger: CATGACATTGGAGTTGGCCAGATGGTTCTTACACCAAAGGTCTACTCTGCTGGCCTTCCAGAATTGCCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR CAA 90 bp GAATGGCCTGGGATAATTGTTAAAAGTGAAGATGCTCTGATTCTAACCCCAAAGAGGCAGGAGAATCACTaGAACCTGGAAGGCGGAGGG +
Preference number: 3 (lower is better)
Translates to: EWPGIIVKSEDALILTPKRQENH*NLEGGG
Trigger: CCCTCCGCCTTCCAGGTTCAAGTGATTCTCCTGCCT...CTTTGGGGTTAGAATCAGAGCATCTTCACTTTTAACAATTATCCCAGGCCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR CAA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAACAGCTCACTGCTGCCTaGAATTCCTGGGCTCAAGGG +
Preference number: 3 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKQLTAA*NSWAQG
Trigger: CCCTTGAGCCCAGGAATTCAAGGCAGCAGTGAGCTG...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
3UTR CCA 72 bp AACCATCTGGCCAACTCCAATGTCATGTTTATAACTTaGTTAAGAAGTATTCTCCATTGGAGGCCGGGGGCG +
Preference number: 3 (lower is better)
Translates to: NHLANSNVMFIT*LRSILHWRPGA
Trigger: CGCCCCCGGCCTCCAATGGAGAATACTTCTTAACCAAGTTATAAACATGACATTGGAGTTGGCCAGATGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR CCA 72 bp GGCCTAAGAGTGAATTCAGACACATTTGGGCAATTCTaGAAGGCCAGCAGAGTAGACCTTTGGTGTAAGAAC +
Preference number: 3 (lower is better)
Translates to: GLRVNSDTFGQF*KASRVDLWCKN
Trigger: GTTCTTACACCAAAGGTCTACTCTGCTGGCCTTCCAGAATTGCCCAAATGTGTCTGAATTCACTCTTAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR CAA 90 bp TCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAAGTATTGCTGGTGCTGCCTACAATGATCTGGTaGGCCGGAATAAACCTTTAC +
Preference number: 3 (lower is better)
Translates to: SLKRSDNPFFKRQVLLVLPTMIW*AGINLY
Trigger: GTAAAGGTTTATTCCGGCCAACCAGATCATTGTAGG...CAGCACCAGCAATACTTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR CAA 90 bp AACCATCTGGCCAACTCCAATGTCATGTTTATAACTTGGTTAAGAAGTATTCTCTGCAGTGAGCCGAGATaGCGCCATTACACTCCAGTC +
Preference number: 3 (lower is better)
Translates to: NHLANSNVMFITWLRSILCSEPR*RHYTPV
Trigger: GACTGGAGTGTAATGGCGCAATCTCGGCTCACTGCA...GAGAATACTTCTTAACCAAGTTATAAACATGACATTGGAGTTGGCCAGATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR GCA 72 bp CCCAAGGAAAATAGTCATAAGGTAGAGACCATCCTTTaGAGATCATCTATAGCCCACCAGTGCTCCCTTTTT +
Preference number: 3 (lower is better)
Translates to: PKENSHKVETIL*RSSIAHQCSLF
Trigger: AAAAAGGGAGCACTGGTGGGCTATAGATGATCTGCAAAGGATGGTCTCTACCTTATGACTATTTTCCTTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR CAA 90 bp GAATGGCCTGGGATAATTGTTAAAAGTGAAGATGCTCTGATTCTAACCCCAAAGTTACATACAGGGTGTTaGCAGAGCAAGGGCCTAAGA +
Preference number: 3 (lower is better)
Translates to: EWPGIIVKSEDALILTPKLHTGC*QSKGLR
Trigger: TCTTAGGCCCTTGCTCTGCAAACACCCTGTATGTAA...CTTTGGGGTTAGAATCAGAGCATCTTCACTTTTAACAATTATCCCAGGCCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR CAA 90 bp TCTCCTGCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTTGCATCTTTGGCTCAGAAAGCTTTGGTaGAGATCAGAGATTGAGTCT +
Preference number: 3 (lower is better)
Translates to: SPARWKGDLIQLGLLHLWLRKLW*RSEIES
Trigger: AGACTCAATCTCTGATCTCAACCAAAGCTTTCTGAG...CCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497558.5
3UTR-3UTR CAA 90 bp AAGGTAGTAACTCCTGGAAGCAATAGGCGGAAAGCAGAGGTTTCTCTCCTTCATTTTTCCATTAAAAATTaGTGTCTTGGCCAGGCATGG +
Preference number: 3 (lower is better)
Translates to: KVVTPGSNRRKAEVSLLHFSIKN*CLGQAW
Trigger: CCATGCCTGGCCAAGACACAAATTTTTAATGGAAAA...ATGAAGGAGAGAAACCTCTGCTTTCCGCCTATTGCTTCCAGGAGTTACTACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000497558.5
3UTR-3UTR CAA 90 bp ATCTGCAAGGTTCTTGTAATCAGAAGGCAATATGGCACAGAGGTTAAGAGAACCCTTGGGCGTACCCATTaGCAACATGGGAAAATAGTT +
Preference number: 3 (lower is better)
Translates to: ICKVLVIRRQYGTEVKRTLGRTH*QHGKIV
Trigger: AACTATTTTCCCATGTTGCAAATGGGTACGCCCAAG...GGTTCTCTTAACCTCTGTGCCATATTGCCTTCTGATTACAAGAACCTTGCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611650.1
3UTR CCA 72 bp AAGGAATTGCGCAGCAACTCAGACTGGATTGAGTATTaGGCTGTGTTTGTCAGATGCAATAACAGAATGAGA +
Preference number: 3 (lower is better)
Translates to: KELRSNSDWIEY*AVFVRCNNRMR
Trigger: TCTCATTCTGTTATTGCATCTGACAAACACAGCCCAATACTCAATCCAGTCTGAGTTGCTGCGCAATTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611650.1
3UTR-3UTR CAA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAACACCATTCTGAACCCTaGTCAGATTGGGCTATGGAT +
Preference number: 3 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKHHSEP*SDWAMD
Trigger: ATCCATAGCCCAATCTGACAAGGGTTCAGAATGGTG...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
3UTR-3UTR CAA 90 bp TCTCCTGCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTTGCATCTTTGGCAATGCTCCTTTAGTTaGCTATGGTTTACACTGATG +
Preference number: 3 (lower is better)
Translates to: SPARWKGDLIQLGLLHLWQCSFS*LWFTLM
Trigger: CATCAGTGTAAACCATAGCAAACTAAAGGAGCATTG...CCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497558.5
3UTR-3UTR CAA 90 bp AAGGTAGTAACTCCTGGAAGCAATAGGCGGAAAGCAGAGGTTTCTCTCCTTCATGCAATGGAGACACTCTaGTACAAAATTTTGTGTTCA +
Preference number: 3 (lower is better)
Translates to: KVVTPGSNRRKAEVSLLHAMETL*YKILCS
Trigger: TGAACACAAAATTTTGTACAAGAGTGTCTCCATTGC...ATGAAGGAGAGAAACCTCTGCTTTCCGCCTATTGCTTCCAGGAGTTACTACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497558.5
3UTR TCA 72 bp AATCTTGATCACTGTAGCAACTGGCTGGTAGATGTTTaGAGGGTGAATGCTTTTAGGCATTCACTCAAGAGA +
Preference number: 3 (lower is better)
Translates to: NLDHCSNWLVDV*RVNAFRHSLKR
Trigger: TCTCTTGAGTGAATGCCTAAAAGCATTCACCCTTCAAACATCTACCAGCCAGTTGCTACAGTGATCAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR GCA 72 bp GAACAATGGAATCTTGGTTATAACCCAGTGTCACAGTaGTCTCAAGAACATTTCCAGTTTGTCTGTCTTGTG +
Preference number: 3 (lower is better)
Translates to: EQWNLGYNPVSQ*SQEHFQFVCLV
Trigger: CACAAGACAGACAAACTGGAAATGTTCTTGAGAGCACTGTGACACTGGGTTATAACCAAGATTCCATTGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR GCA 72 bp TCCTCAAACACCAAAGAACTAAAGCTTCAGGGCATTTaGATATGTGATCAGTCACTTTTCACACTGCTAGCT +
Preference number: 3 (lower is better)
Translates to: SSNTKELKLQGI*ICDQSLFTLLA
Trigger: AGCTAGCAGTGTGAAAAGTGACTGATCACATATGCAAATGCCCTGAAGCTTTAGTTCTTTGGTGTTTGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR CAA 90 bp CCAGGGACAAGGAACTACAATCTGACTATTCCTCTTAGGGACTTATCTATTTTATGCTGGTGCTGGTGTTaGTTGCTATGCAAAGTAAAG +
Preference number: 3 (lower is better)
Translates to: PGTRNYNLTIPLRDLSILCWCWC*LLCKVK
Trigger: CTTTACTTTGCATAGCAACAAACACCAGCACCAGCA...TAAAATAGATAAGTCCCTAAGAGGAATAGTCAGATTGTAGTTCCTTGTCCCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR CAA 90 bp AACCATCTGGCCAACTCCAATGTCATGTTTATAACTTGGTTAAGAAGTATTCTCAACCTGGCAAGCGAGTaGGAGTTAAAGTTGTTGTTG +
Preference number: 3 (lower is better)
Translates to: NHLANSNVMFITWLRSILNLASE*ELKLLL
Trigger: CAACAACAACTTTAACTCCAACTCGCTTGCCAGGTT...GAGAATACTTCTTAACCAAGTTATAAACATGACATTGGAGTTGGCCAGATGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR CAA 90 bp GAATGGCCTGGGATAATTGTTAAAAGTGAAGATGCTCTGATTCTAACCCCAAAGTGCTTAGCTTTGATGTaGCAAAGCATCTCTTTTGGT +
Preference number: 3 (lower is better)
Translates to: EWPGIIVKSEDALILTPKCLALM*QSISFG
Trigger: ACCAAAAGAGATGCTTTGCAACATCAAAGCTAAGCA...CTTTGGGGTTAGAATCAGAGCATCTTCACTTTTAACAATTATCCCAGGCCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR TCA 72 bp TTCATAGTATCAGTAGACACTATGAAGACCCAACCCTaGACCATCATATTTCTCACAATATACCCGCCATAC +
Preference number: 3 (lower is better)
Translates to: FIVSVDTMKTQP*TIIFLTIYPPY
Trigger: GTATGGCGGGTATATTGTGAGAAATATGATGGTTCAGGGTTGGGTCTTCATAGTGTCTACTGATACTATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR CCA 72 bp GTTGTCAATATTCTTGTATTGGGATTAGTCTCTCTGTaGGGCAAAACAACCTCTGAAACTGGCCTTACATTT +
Preference number: 3 (lower is better)
Translates to: VVNILVLGLVSL*GKTTSETGLTF
Trigger: AAATGTAAGGCCAGTTTCAGAGGTTGTTTTGCCCCACAGAGAGACTAATCCCAATACAAGAATATTGACAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497558.5
3UTR-3UTR CAA 90 bp CCAGGGACAAGGAACTACAATCTGACTATTCCTCTTAGGGACTTATCTATTTTATCTGAAATAGAAGACTaGGCTGTCGATGTTAATTGG +
Preference number: 3 (lower is better)
Translates to: PGTRNYNLTIPLRDLSILSEIED*AVDVNW
Trigger: CCAATTAACATCGACAGCCAAGTCTTCTATTTCAGA...TAAAATAGATAAGTCCCTAAGAGGAATAGTCAGATTGTAGTTCCTTGTCCCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR CAA 90 bp AATATTCTTGTATTGGGATTAGTCTCTCTGTGGGGCAAAACAACCTCTGAAACTTCTGAAATAGAAGACTaGGCTGTCGATGTTAATTGG +
Preference number: 3 (lower is better)
Translates to: NILVLGLVSLWGKTTSETSEIED*AVDVNW
Trigger: CCAATTAACATCGACAGCCAAGTCTTCTATTTCAGA...AGTTTCAGAGGTTGTTTTGCCCCACAGAGAGACTAATCCCAATACAAGAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497558.5
3UTR TCA 72 bp CACCAAAGAACTAAAGCTTCAGGGCATTTGCATATGTaGTCAGTCACTTTTCACACTGCTAGCTTTTCATTT +
Preference number: 3 (lower is better)
Translates to: HQRTKASGHLHM*SVTFHTASFSF
Trigger: AAATGAAAAGCTAGCAGTGTGAAAAGTGACTGATCACATATGCAAATGCCCTGAAGCTTTAGTTCTTTGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR CCA 72 bp TCAATGCTTAGCTTTGATGTTGCAAAGCATCTCTTTTaGTCACTTTCAATTTGGGAGTTAGAGAGACCAAAC +
Preference number: 3 (lower is better)
Translates to: SMLSFDVAKHLF*SLSIWELERPN
Trigger: GTTTGGTCTCTCTAACTCCCAAATTGAAAGTGACCAAAAGAGATGCTTTGCAACATCAAAGCTAAGCATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR CAA 90 bp AACCATCTGGCCAACTCCAATGTCATGTTTATAACTTGGTTAAGAAGTATTCTCTTGGTCACTTTCAATTaGGGAGTTAGAGAGACCAAA +
Preference number: 3 (lower is better)
Translates to: NHLANSNVMFITWLRSILLVTFN*GVRETK
Trigger: TTTGGTCTCTCTAACTCCCAAATTGAAAGTGACCAA...GAGAATACTTCTTAACCAAGTTATAAACATGACATTGGAGTTGGCCAGATGGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR CAA 90 bp AACCATCTGGCCAACTCCAATGTCATGTTTATAACTTGGTTAAGAAGTATTCTCTGCAAAGCATCTCTTTaGGTCACTTTCAATTTGGGA +
Preference number: 3 (lower is better)
Translates to: NHLANSNVMFITWLRSILCKASL*VTFNLG
Trigger: TCCCAAATTGAAAGTGACCAAAAGAGATGCTTTGCA...GAGAATACTTCTTAACCAAGTTATAAACATGACATTGGAGTTGGCCAGATGGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR TCA 72 bp AAAATCACAAATCAAGGAATCTGCTTTACTTATCTGTaGATACCCTATAAGGGACCAGCACAGAATCTTCTC +
Preference number: 3 (lower is better)
Translates to: KITNQGICFTYL*IPYKGPAQNLL
Trigger: GAGAAGATTCTGTGCTGGTCCCTTATAGGGTATTCACAGATAAGTAAAGCAGATTCCTTGATTTGTGATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR-3UTR CAA 90 bp AACCATCTGGCCAACTCCAATGTCATGTTTATAACTTGGTTAAGAAGTATTCTCATTCAATGCTTAGCTTaGATGTTGCAAAGCATCTCT +
Preference number: 3 (lower is better)
Translates to: NHLANSNVMFITWLRSILIQCLA*MLQSIS
Trigger: AGAGATGCTTTGCAACATCAAAGCTAAGCATTGAAT...GAGAATACTTCTTAACCAAGTTATAAACATGACATTGGAGTTGGCCAGATGGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
3UTR TCA 72 bp TTAAGCTGCAAAAATCATCTAAGTAGCATGAGCTTTTaGAACTGCAGACTTAAATCTCATGATGGCATCAAA +
Preference number: 3 (lower is better)
Translates to: LSCKNHLSSMSF*NCRLKSHDGIK
Trigger: TTTGATGCCATCATGAGATTTAAGTCTGCAGTTTCAAAAGCTCATGCTACTTAGATGATTTTTGCAGCTTAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357537.4
ENST00000497558.5
3UTR GCA 72 bp TTATCTATTTTAAAAGGTGCTGAAGAGAGGGCAAAGTaGAATGAAACTGAATTATCAATGGCAGTAGAATCT +
Preference number: 3 (lower is better)
Translates to: LSILKGAEERAK*NETELSMAVES
Trigger: AGATTCTACTGCCATTGATAATTCAGTTTCATTGCACTTTGCCCTCTCTTCAGCACCTTTTAAAATAGATAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR TCA 90 bp TCCTGCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTTGCATCTTTGGAACTGTTCCGCGGGCCTTaGAGCCGGGCGGCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: SCQMERRLDSIRPFASLELFRGP*SRAAGP
Trigger: CGGCCCTGCCGCCCGGCTTCAAGGCCCGCGGAACAG...TTCCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR CCA 90 bp AGACACTGGCATGGGCTTGGGCGTACCCATTTGCAACATGGGAAAATAGTTTTTGTGGGTAGATGGGCCTaGTGGGCAGCGGAGACGCCG +
Preference number: 4 (lower is better)
Translates to: RHWHGLGRTHLQHGKIVFVGRWA*WAAETP
Trigger: CGGCGTCTCCGCTGCCCACCAGGCCCATCTACCCAC...AAAAACTATTTTCCCATGTTGCAAATGGGTACGCCCAAGCCCATGCCAGTGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611650.1
CDS-3UTR TCA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAACTGTTCCGCGGGCCTTaGAGCCGGGCGGCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKLFRGP*SRAAGP
Trigger: CGGCCCTGCCGCCCGGCTTCAAGGCCCGCGGAACAG...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR GCA 90 bp AGATCATCTATAGCCCACCAGTGCTCCCTTTTTGTGCTCCCTGCCTTTTCAATGCTGGAAGGCGGAGGGTaGAGTGAGCCGAGATTGCGC +
Preference number: 4 (lower is better)
Translates to: RSSIAHQCSLFVLPAFSMLEGGG*SEPRLR
Trigger: GCGCAATCTCGGCTCACTGCACCCTCCGCCTTCCAG...CATTGAAAAGGCAGGGAGCACAAAAAGGGAGCACTGGTGGGCTATAGATGATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CCA 90 bp ATCTGCAAGGTTCTTGTAATCAGAAGGCAATATGGCACAGAGGTTAAGAGAACCGGTAGATGGGCCTGGTaGGCAGCGGAGACGCCGCCG +
Preference number: 4 (lower is better)
Translates to: ICKVLVIRRQYGTEVKRTGRWAW*AAETPP
Trigger: CGGCGGCGTCTCCGCTGCCCACCAGGCCCATCTACC...GGTTCTCTTAACCTCTGTGCCATATTGCCTTCTGATTACAAGAACCTTGCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611650.1
CDS-3UTR CCA 90 bp AGGATCTGCAAGGTTCTTGTAATCAGAAGGCAATATGGCACAGAGGTTAAGAGAGGCCCGGCCAGGGAGTaGGTAGATGGGCCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: RICKVLVIRRQYGTEVKRGPARE*VDGPGG
Trigger: CCCACCAGGCCCATCTACCCACTCCCTGGCCGGGCC...TCTCTTAACCTCTGTGCCATATTGCCTTCTGATTACAAGAACCTTGCAGATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611650.1
CDS-3UTR GCA 90 bp TCCTGCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTTGCATCTTTGGAAGGGCAGAGCTGGTCCTaGAACAGGGCTCGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: SCQMERRLDSIRPFASLEGQSWS*NRARVP
Trigger: CGGGACCCGAGCCCTGTTGCAGGACCAGCTCTGCCC...TTCCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR TCA 90 bp AATTTCTTAATCACCATTCTGAACCCTTGTCAGATTGGGCTATGGATGAATATTCTGTTCCGCGGGCCTTaGAGCCGGGCGGCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: NFLITILNPCQIGLWMNILFRGP*SRAAGP
Trigger: CGGCCCTGCCGCCCGGCTTCAAGGCCCGCGGAACAG...AATATTCATCCATAGCCCAATCTGACAAGGGTTCAGAATGGTGATTAAGAAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR TCA 90 bp AGATCATCTATAGCCCACCAGTGCTCCCTTTTTGTGCTCCCTGCCTTTTCAATGTGCCCAGGTTGGTCTTaGACTCCTGGCCCTCAAGTG +
Preference number: 4 (lower is better)
Translates to: RSSIAHQCSLFVLPAFSMCPGWS*TPGPQV
Trigger: CACTTGAGGGCCAGGAGTTCAAGACCAACCTGGGCA...CATTGAAAAGGCAGGGAGCACAAAAAGGGAGCACTGGTGGGCTATAGATGATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CCA 90 bp CAGTTATGTTTAGGAATGCAACCAGAGGAAGCCCAGAAGCCTAGAGCGTTAAGGATCAGCAGCGAAGAATaGCAGGTTTCCCGGCGCCGA +
Preference number: 4 (lower is better)
Translates to: QLCLGMQPEEAQKPRALRISSEE*QVSRRR
Trigger: TCGGCGCCGGGAAACCTGCCATTCTTCGCTGCTGAT...CCTTAACGCTCTAGGCTTCTGGGCTTCCTCTGGTTGCATTCCTAAACATAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611650.1
CDS-3UTR CCA 90 bp AGGATCTGCAAGGTTCTTGTAATCAGAAGGCAATATGGCACAGAGGTTAAGAGACAGGGAGTGGGTAGATaGGCCTGGTGGGCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: RICKVLVIRRQYGTEVKRQGVGR*AWWAAE
Trigger: CTCCGCTGCCCACCAGGCCCATCTACCCACTCCCTG...TCTCTTAACCTCTGTGCCATATTGCCTTCTGATTACAAGAACCTTGCAGATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611650.1
CDS-3UTR TCA 90 bp TTAAATGGCCCCAAGTCAGCCAGGGACAAGGAACTACAATCTGACTATTCCTCTGGCAGGAGAATCACTTaGACCTGGAAGGCGGAGGGT +
Preference number: 4 (lower is better)
Translates to: LNGPKSARDKELQSDYSSGRRIT*TWKAEG
Trigger: ACCCTCCGCCTTCCAGGTTCAAGTGATTCTCCTGCC...AGAGGAATAGTCAGATTGTAGTTCCTTGTCCCTGGCTGACTTGGGGCCATTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CCA 90 bp AAGGTAGTAACTCCTGGAAGCAATAGGCGGAAAGCAGAGGTTTCTCTCCTTCATTCTTGCCATCCGCGGTaGCGGACACTGGTCACAGAT +
Preference number: 4 (lower is better)
Translates to: KVVTPGSNRRKAEVSLLHSCHPR*RTLVTD
Trigger: ATCTGTGACCAGTGTCCGCCACCGCGGATGGCAAGA...ATGAAGGAGAGAAACCTCTGCTTTCCGCCTATTGCTTCCAGGAGTTACTACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR CCA 90 bp AGACACTGGCATGGGCTTGGGCGTACCCATTTGCAACATGGGAAAATAGTTTTTTCTTGCCATCCGCGGTaGCGGACACTGGTCACAGAT +
Preference number: 4 (lower is better)
Translates to: RHWHGLGRTHLQHGKIVFSCHPR*RTLVTD
Trigger: ATCTGTGACCAGTGTCCGCCACCGCGGATGGCAAGA...AAAAACTATTTTCCCATGTTGCAAATGGGTACGCCCAAGCCCATGCCAGTGTCT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000611650.1
CDS-3UTR CCA 90 bp AGGCATTCAGTCTTAAATGGCCCCAAGTCAGCCAGGGACAAGGAACTACAATCTGGAGGCCAAGGCGGATaGATCAACAGGTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: RHSVLNGPKSARDKELQSGGQGG*INRSGD
Trigger: ATCTCCTGACCTGTTGATCCATCCGCCTTGGCCTCC...AGATTGTAGTTCCTTGTCCCTGGCTGACTTGGGGCCATTTAAGACTGAATGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CCA 90 bp TTAAATGGCCCCAAGTCAGCCAGGGACAAGGAACTACAATCTGACTATTCCTCTAGAAGTATTCTCCATTaGAGGCCGGGGGCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LNGPKSARDKELQSDYSSRSILH*RPGAVA
Trigger: AGCCACCGCCCCCGGCCTCCAATGGAGAATACTTCT...AGAGGAATAGTCAGATTGTAGTTCCTTGTCCCTGGCTGACTTGGGGCCATTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CCA 90 bp GGCCTTGAAGGATGGGGAGAAGTTTGTCAGTTATGTTTAGGAATGCAACCAGAGAGGCAGGTCGGGGGCTaGAGAGAACAGGATCTGCAA +
Preference number: 4 (lower is better)
Translates to: GLEGWGEVCQLCLGMQPERQVGG*REQDLQ
Trigger: TTGCAGATCCTGTTCTCTCCAGCCCCCGACCTGCCT...CTCTGGTTGCATTCCTAAACATAACTGACAAACTTCTCCCCATCCTTCAAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611650.1
CDS-3UTR CCA 90 bp GGCAGGTCGGGGGCTGGAGAGAACAGGATCTGCAAGGTTCTTGTAATCAGAAGGTTGGGCCTTGAAGGATaGGGAGAAGTTTGTCAGTTA +
Preference number: 4 (lower is better)
Translates to: GRSGAGENRICKVLVIRRLGLEG*GEVCQL
Trigger: TAACTGACAAACTTCTCCCCATCCTTCAAGGCCCAA...CCTTCTGATTACAAGAACCTTGCAGATCCTGTTCTCTCCAGCCCCCGACCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611650.1
CDS-3UTR GCA 90 bp TCCTGCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTTGCATCTTTGGAATCCGATCAGGTCTCTTaGCATCCGCGGTGGCGGACA +
Preference number: 4 (lower is better)
Translates to: SCQMERRLDSIRPFASLESDQVS*HPRWRT
Trigger: TGTCCGCCACCGCGGATGGCAAGAGACCTGATCGGA...TTCCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR GCA 90 bp AGGATCTGCAAGGTTCTTGTAATCAGAAGGCAATATGGCACAGAGGTTAAGAGATCCGATCAGGTCTCTTaGCATCCGCGGTGGCGGACA +
Preference number: 4 (lower is better)
Translates to: RICKVLVIRRQYGTEVKRSDQVS*HPRWRT
Trigger: TGTCCGCCACCGCGGATGGCAAGAGACCTGATCGGA...TCTCTTAACCTCTGTGCCATATTGCCTTCTGATTACAAGAACCTTGCAGATCCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611650.1
CDS-3UTR GCA 90 bp AATGCTTTTAGGCATTCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAACCGAGAGGCGGAGCTTaGAGTGAGCCGAGATGGCGC +
Preference number: 4 (lower is better)
Translates to: NAFRHSLKRSDNPFFKRQPRGGA*SEPRWR
Trigger: GCGCCATCTCGGCTCACTGCAAGCTCCGCCTCTCGG...TTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGAATGCCTAAAAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR GCA 90 bp AGATCATCTATAGCCCACCAGTGCTCCCTTTTTGTGCTCCCTGCCTTTTCAATGTCTATAGCCCACCAGTaGTCCCTTTTTGTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: RSSIAHQCSLFVLPAFSMSIAHQ*SLFVLP
Trigger: AGGGAGCACAAAAAGGGAGCACTGGTGGGCTATAGA...CATTGAAAAGGCAGGGAGCACAAAAAGGGAGCACTGGTGGGCTATAGATGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR GCA 90 bp TCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAAGTATTGCTGGTGCTGGGGACTACAGATGCATaGCATGCCACCATGCCCAGA +
Preference number: 4 (lower is better)
Translates to: SLKRSDNPFFKRQVLLVLGTTDA*HATMPR
Trigger: TCTGGGCATGGTGGCATGGCATGCATCTGTAGTCCC...CAGCACCAGCAATACTTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR GCA 90 bp AATTTCTTAATCACCATTCTGAACCCTTGTCAGATTGGGCTATGGATGAATATTGGGCAGAGCTGGTCCTaGAACAGGGCTCGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: NFLITILNPCQIGLWMNIGQSWS*NRARVP
Trigger: CGGGACCCGAGCCCTGTTGCAGGACCAGCTCTGCCC...AATATTCATCCATAGCCCAATCTGACAAGGGTTCAGAATGGTGATTAAGAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379151.9
CDS-3UTR GCA 90 bp TCTCCTGCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTTGCATCTTTGGGTGATCTTGGCTCACTaGAACCTCCGCCTCCTAGGT +
Preference number: 4 (lower is better)
Translates to: SPARWKGDLIQLGLLHLWVILAH*NLRLLG
Trigger: ACCTAGGAGGCGGAGGTTGCAGTGAGCCAAGATCAC...CCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR TCA 90 bp GAATGGCCTGGGATAATTGTTAAAAGTGAAGATGCTCTGATTCTAACCCCAAAGGAGGCTACAGTGAGCTaGGATCGTGCCACCGGATTC +
Preference number: 4 (lower is better)
Translates to: EWPGIIVKSEDALILTPKEATVS*DRATGF
Trigger: GAATCCGGTGGCACGATCTCAGCTCACTGTAGCCTC...CTTTGGGGTTAGAATCAGAGCATCTTCACTTTTAACAATTATCCCAGGCCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR TCA 90 bp ACCAAAGAACTAAAGCTTCAGGGCATTTGCATATGTGATCAGTCACTTTTCACACTCCTGGCCCTCAAGTaGTCCTCCTGTCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: TKELKLQGICICDQSLFTLLALK*SSCLGL
Trigger: GAGGCCAAGACAGGAGGATCACTTGAGGGCCAGGAG...TGTGAAAAGTGACTGATCACATATGCAAATGCCCTGAAGCTTTAGTTCTTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR TCA 90 bp CAGTTATGTTTAGGAATGCAACCAGAGGAAGCCCAGAAGCCTAGAGCGTTAAGGGATGCAATAACAGAATaGGAGGCTAGGAAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: QLCLGMQPEEAQKPRALRDAITE*EARKAG
Trigger: ACCTGCCTTCCTAGCCTCTCATTCTGTTATTGCATC...CCTTAACGCTCTAGGCTTCTGGGCTTCCTCTGGTTGCATTCCTAAACATAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611650.1
CDS-3UTR GCA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAATCCGATCAGGTCTCTTaGCATCCGCGGTGGCGGACA +
Preference number: 4 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKSDQVS*HPRWRT
Trigger: TGTCCGCCACCGCGGATGGCAAGAGACCTGATCGGA...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR GCA 90 bp TCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAAGTATTGCTGGTGCTGGCAGTGAGCCGAGATTaGGCCATTACACTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: SLKRSDNPFFKRQVLLVLAVSRD*AITLQS
Trigger: AGACTGGAGTGTAATGGCGCAATCTCGGCTCACTGC...CAGCACCAGCAATACTTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR GCA 90 bp AGGCATTCAGTCTTAAATGGCCCCAAGTCAGCCAGGGACAAGGAACTACAATCTCTTGGCCTCTTGAAGTaGTGGGATTACAGATGTGAG +
Preference number: 4 (lower is better)
Translates to: RHSVLNGPKSARDKELQSLGLLK*WDYRCE
Trigger: CTCACATCTGTAATCCCAGCACTTCAAGAGGCCAAG...AGATTGTAGTTCCTTGTCCCTGGCTGACTTGGGGCCATTTAAGACTGAATGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR GCA 90 bp AAGGTAGTAACTCCTGGAAGCAATAGGCGGAAAGCAGAGGTTTCTCTCCTTCATTTGCCCAGGCTGGAATaGAATGGTGTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: KVVTPGSNRRKAEVSLLHLPRLE*NGVILA
Trigger: AGCCAAGATCACACCATTGCATTCCAGCCTGGGCAA...ATGAAGGAGAGAAACCTCTGCTTTCCGCCTATTGCTTCCAGGAGTTACTACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR CCA 90 bp TCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAAGTATTGCTGGTGCTGCTGGCTGGAGTGCAGTaGCATGTTCATAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: SLKRSDNPFFKRQVLLVLLAGVQ*HVHSSL
Trigger: CAGTGAGCTATGAACATGCCACTGCACTCCAGCCAG...CAGCACCAGCAATACTTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CCA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAAATTAGGGGGCAGAGCTaGTCCTGCAACAGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKIRGQS*SCNRAR
Trigger: CCGAGCCCTGTTGCAGGACCAGCTCTGCCCCCTAAT...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000379151.9
CDS-3UTR CCA 90 bp AATATTCTTGTATTGGGATTAGTCTCTCTGTGGGGCAAAACAACCTCTGAAACTATTAGGGGGCAGAGCTaGTCCTGCAACAGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: NILVLGLVSLWGKTTSETIRGQS*SCNRAR
Trigger: CCGAGCCCTGTTGCAGGACCAGCTCTGCCCCCTAAT...AGTTTCAGAGGTTGTTTTGCCCCACAGAGAGACTAATCCCAATACAAGAATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR CCA 90 bp AAGGTAGTAACTCCTGGAAGCAATAGGCGGAAAGCAGAGGTTTCTCTCCTTCATCAGGCTGGAATGCAATaGTGTGATCTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: KVVTPGSNRRKAEVSLLHQAGMQ*CDLGSL
Trigger: CAGTGAGCCAAGATCACACCATTGCATTCCAGCCTG...ATGAAGGAGAGAAACCTCTGCTTTCCGCCTATTGCTTCCAGGAGTTACTACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR CCA 90 bp GGGGCTGGAGAGAACAGGATCTGCAAGGTTCTTGTAATCAGAAGGCAATATGGCGACTGGATTGAGTATTaGGCTGTGTTTGTCAGATGC +
Preference number: 4 (lower is better)
Translates to: GAGENRICKVLVIRRQYGDWIEY*AVFVRC
Trigger: GCATCTGACAAACACAGCCCAATACTCAATCCAGTC...GCCATATTGCCTTCTGATTACAAGAACCTTGCAGATCCTGTTCTCTCCAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611650.1
CDS-3UTR TCA 90 bp AAGGTAGTAACTCCTGGAAGCAATAGGCGGAAAGCAGAGGTTTCTCTCCTTCATGAGGCCACATTCCTATaGCACTTGGCCAAGAAATGT +
Preference number: 4 (lower is better)
Translates to: KVVTPGSNRRKAEVSLLHEATFL*HLAKKC
Trigger: ACATTTCTTGGCCAAGTGTCATAGGAATGTGGCCTC...ATGAAGGAGAGAAACCTCTGCTTTCCGCCTATTGCTTCCAGGAGTTACTACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR GCA 90 bp AGATCATCTATAGCCCACCAGTGCTCCCTTTTTGTGCTCCCTGCCTTTTCAATGTCAAGAGGCAAGTATTaGTGGTGCTGGTGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: RSSIAHQCSLFVLPAFSMSRGKY*WCWCLL
Trigger: CAACAAACACCAGCACCAGCAATACTTGCCTCTTGA...CATTGAAAAGGCAGGGAGCACAAAAAGGGAGCACTGGTGGGCTATAGATGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR GCA 90 bp GGGGCTGGAGAGAACAGGATCTGCAAGGTTCTTGTAATCAGAAGGCAATATGGCGGAGAGAACAGGATCTaGAAGGTTCTTGTAATCAGA +
Preference number: 4 (lower is better)
Translates to: GAGENRICKVLVIRRQYGGENRI*KVLVIR
Trigger: TCTGATTACAAGAACCTTGCAGATCCTGTTCTCTCC...GCCATATTGCCTTCTGATTACAAGAACCTTGCAGATCCTGTTCTCTCCAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611650.1
CDS-3UTR CCA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAATCTTGCCATCCGCGGTaGCGGACACTGGTCACAGAT +
Preference number: 4 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKSCHPR*RTLVTD
Trigger: ATCTGTGACCAGTGTCCGCCACCGCGGATGGCAAGA...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR CCA 90 bp TTAAATGGCCCCAAGTCAGCCAGGGACAAGGAACTACAATCTGACTATTCCTCTACATTTGGGCAATTCTaGAAGGCCAGCAGAGTAGAC +
Preference number: 4 (lower is better)
Translates to: LNGPKSARDKELQSDYSSTFGQF*KASRVD
Trigger: GTCTACTCTGCTGGCCTTCCAGAATTGCCCAAATGT...AGAGGAATAGTCAGATTGTAGTTCCTTGTCCCTGGCTGACTTGGGGCCATTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CCA 90 bp AGATCATCTATAGCCCACCAGTGCTCCCTTTTTGTGCTCCCTGCCTTTTCAATGGAATTCAGACACATTTaGGCAATTCTGGAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: RSSIAHQCSLFVLPAFSMEFRHI*AILEGQ
Trigger: CTGGCCTTCCAGAATTGCCCAAATGTGTCTGAATTC...CATTGAAAAGGCAGGGAGCACAAAAAGGGAGCACTGGTGGGCTATAGATGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CCA 90 bp TCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAAGTATTGCTGGTGCTGGCATTCAGTCTTAAATaGCCCCAAGTCAGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SLKRSDNPFFKRQVLLVLAFSLK*PQVSQG
Trigger: TCCCTGGCTGACTTGGGGCCATTTAAGACTGAATGC...CAGCACCAGCAATACTTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CCA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAAATCAGCAGCGAAGAATaGCAGGTTTCCCGGCGCCGA +
Preference number: 4 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKISSEE*QVSRRR
Trigger: TCGGCGCCGGGAAACCTGCCATTCTTCGCTGCTGAT...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379151.9
CDS-3UTR CCA 90 bp TCCTGCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTTGCATCTTTGGAAGTAGTCCCAGCTACTTaGGACACTGAGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: SCQMERRLDSIRPFASLEVVPAT*DTEAGE
Trigger: TTCTCCTGCCTCAGTGTCCCAAGTAGCTGGGACTAC...TTCCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR CCA 90 bp AGACACTGGCATGGGCTTGGGCGTACCCATTTGCAACATGGGAAAATAGTTTTTCCCCCTGCTACTGTTTaGGAAGAGAAAAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: RHWHGLGRTHLQHGKIVFPPATV*EEKSSL
Trigger: GAGAGAACTTTTCTCTTCCCAAACAGTAGCAGGGGG...AAAAACTATTTTCCCATGTTGCAAATGGGTACGCCCAAGCCCATGCCAGTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000611650.1
CDS-3UTR TCA 90 bp AGGCATTCAGTCTTAAATGGCCCCAAGTCAGCCAGGGACAAGGAACTACAATCTGGGCATTTGCATATGTaGTCAGTCACTTTTCACACT +
Preference number: 4 (lower is better)
Translates to: RHSVLNGPKSARDKELQSGHLHM*SVTFHT
Trigger: AGTGTGAAAAGTGACTGATCACATATGCAAATGCCC...AGATTGTAGTTCCTTGTCCCTGGCTGACTTGGGGCCATTTAAGACTGAATGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR GCA 90 bp TCTCCTGCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTTGCATCTTTGGGTCCTGGATCATCTCTaGCCTTGTCACTTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: SPARWKGDLIQLGLLHLWVLDHL*PCHFSV
Trigger: CACAGAAAAGTGACAAGGGCAGAGATGATCCAGGAC...CCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR GCA 90 bp AGGCATTCAGTCTTAAATGGCCCCAAGTCAGCCAGGGACAAGGAACTACAATCTAGATGTGAGGCATTGTaGCTGGCCTTTTGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: RHSVLNGPKSARDKELQSRCEAL*LAFCFF
Trigger: AAAGAAACAAAAGGCCAGGCACAATGCCTCACATCT...AGATTGTAGTTCCTTGTCCCTGGCTGACTTGGGGCCATTTAAGACTGAATGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR GCA 90 bp AATGCTTTTAGGCATTCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAAAGCTGGGACTACAGATaGATGCCATGCCACCATGCC +
Preference number: 4 (lower is better)
Translates to: NAFRHSLKRSDNPFFKRQSWDYR*MPCHHA
Trigger: GGCATGGTGGCATGGCATGCATCTGTAGTCCCAGCT...TTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGAATGCCTAAAAGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CCA 90 bp TTAAATGGCCCCAAGTCAGCCAGGGACAAGGAACTACAATCTGACTATTCCTCTACCTATTATGGGCCTTaGAGGAGAATCATCCTGCTT +
Preference number: 4 (lower is better)
Translates to: LNGPKSARDKELQSDYSSTYYGP*RRIILL
Trigger: AAGCAGGATGATTCTCCTCCAAGGCCCATAATAGGT...AGAGGAATAGTCAGATTGTAGTTCCTTGTCCCTGGCTGACTTGGGGCCATTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CCA 90 bp TCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAAGTATTGCTGGTGCTGAGCAGAGTAGACCTTTaGTGTAAGAACCATCTGGCC +
Preference number: 4 (lower is better)
Translates to: SLKRSDNPFFKRQVLLVLSRVDL*CKNHLA
Trigger: GGCCAGATGGTTCTTACACCAAAGGTCTACTCTGCT...CAGCACCAGCAATACTTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CCA 90 bp AAGGTAGTAACTCCTGGAAGCAATAGGCGGAAAGCAGAGGTTTCTCTCCTTCATGGATTAGTCTCTCTGTaGGGCAAAACAACCTCTGAA +
Preference number: 4 (lower is better)
Translates to: KVVTPGSNRRKAEVSLLHGLVSL*GKTTSE
Trigger: TTCAGAGGTTGTTTTGCCCCACAGAGAGACTAATCC...ATGAAGGAGAGAAACCTCTGCTTTCCGCCTATTGCTTCCAGGAGTTACTACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR TCA 90 bp ATCTGCAAGGTTCTTGTAATCAGAAGGCAATATGGCACAGAGGTTAAGAGAACCCACTGGTCACAGATATaGGTCTATCCACGAACGTCA +
Preference number: 4 (lower is better)
Translates to: ICKVLVIRRQYGTEVKRTHWSQI*VYPRTS
Trigger: TGACGTTCGTGGATAGACTCATATCTGTGACCAGTG...GGTTCTCTTAACCTCTGTGCCATATTGCCTTCTGATTACAAGAACCTTGCAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611650.1
CDS-3UTR TCA 90 bp AGGCATTCAGTCTTAAATGGCCCCAAGTCAGCCAGGGACAAGGAACTACAATCTAAGTTCAGTCATCCATaGCTCTCTTACAATGGGTTT +
Preference number: 4 (lower is better)
Translates to: RHSVLNGPKSARDKELQSKFSHP*LSYNGF
Trigger: AAACCCATTGTAAGAGAGTCATGGATGACTGAACTT...AGATTGTAGTTCCTTGTCCCTGGCTGACTTGGGGCCATTTAAGACTGAATGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR TCA 90 bp TCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAAGTATTGCTGGTGCTGAGTATCTGTCCAGATTaGTCGATCTCCAGATGTGTC +
Preference number: 4 (lower is better)
Translates to: SLKRSDNPFFKRQVLLVLSICPD*SISRCV
Trigger: GACACATCTGGAGATCGATCAATCTGGACAGATACT...CAGCACCAGCAATACTTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR TCA 90 bp GAATGGCCTGGGATAATTGTTAAAAGTGAAGATGCTCTGATTCTAACCCCAAAGCTGAGATTACAGGTGTaGGCTACCTTGTCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: EWPGIIVKSEDALILTPKLRLQV*ATLSAH
Trigger: ATGGGCAGACAAGGTAGCTCACACCTGTAATCTCAG...CTTTGGGGTTAGAATCAGAGCATCTTCACTTTTAACAATTATCCCAGGCCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR TCA 90 bp TCTCCTGCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTTGCATCTTTGGGGGCAAAACAACCTCTaGAACTGGCCTTACATTTTG +
Preference number: 4 (lower is better)
Translates to: SPARWKGDLIQLGLLHLWGQNNL*NWPYIL
Trigger: CAAAATGTAAGGCCAGTTTCAGAGGTTGTTTTGCCC...CCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR TCA 90 bp CAGTTATGTTTAGGAATGCAACCAGAGGAAGCCCAGAAGCCTAGAGCGTTAAGGAAGGTTTTATTGGTGTaGCATTTAAGTTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: QLCLGMQPEEAQKPRALRKVLLV*HLSWAL
Trigger: CAAGGCCCAACTTAAATGTCACACCAATAAAACCTT...CCTTAACGCTCTAGGCTTCTGGGCTTCCTCTGGTTGCATTCCTAAACATAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611650.1
CDS-3UTR GCA 90 bp AAGGTAGTAACTCCTGGAAGCAATAGGCGGAAAGCAGAGGTTTCTCTCCTTCATGGAGGAGAATCATCCTaGTTTTTAAATCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: KVVTPGSNRRKAEVSLLHGGESS*FLNPGG
Trigger: TCCTCCTGGATTTAAAAAGCAGGATGATTCTCCTCC...ATGAAGGAGAGAAACCTCTGCTTTCCGCCTATTGCTTCCAGGAGTTACTACCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR GCA 90 bp AGGCATTCAGTCTTAAATGGCCCCAAGTCAGCCAGGGACAAGGAACTACAATCTGTTAACTGGTCCTTTTaGAGGCATTGGTCCAATAAT +
Preference number: 4 (lower is better)
Translates to: RHSVLNGPKSARDKELQSVNWSF*RHWSNN
Trigger: ATTATTGGACCAATGCCTGCAAAAGGACCAGTTAAC...AGATTGTAGTTCCTTGTCCCTGGCTGACTTGGGGCCATTTAAGACTGAATGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR GCA 90 bp TCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAAGTATTGCTGGTGCTGAACCCAGTGTCACAGTaGTCTCAAGAACATTTCCAG +
Preference number: 4 (lower is better)
Translates to: SLKRSDNPFFKRQVLLVLNPVSQ*SQEHFQ
Trigger: CTGGAAATGTTCTTGAGAGCACTGTGACACTGGGTT...CAGCACCAGCAATACTTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR GCA 90 bp TCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAAGTATTGCTGGTGCTGGTAGAGACCATCCTTTaGAGATCATCTATAGCCCAC +
Preference number: 4 (lower is better)
Translates to: SLKRSDNPFFKRQVLLVLVETIL*RSSIAH
Trigger: GTGGGCTATAGATGATCTGCAAAGGATGGTCTCTAC...CAGCACCAGCAATACTTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR GCA 90 bp TGTCAGTTATGTTTAGGAATGCAACCAGAGGAAGCCCAGAAGCCTAGAGCGTTAGCTGTGTTTGTCAGATaGAATAACAGAATGAGAGGC +
Preference number: 4 (lower is better)
Translates to: CQLCLGMQPEEAQKPRALAVFVR*NNRMRG
Trigger: GCCTCTCATTCTGTTATTGCATCTGACAAACACAGC...TAACGCTCTAGGCTTCTGGGCTTCCTCTGGTTGCATTCCTAAACATAACTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611650.1
CDS-3UTR CCA 90 bp TCCTGCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTTGCATCTTTGGAATGTTTCCTGTTGTCCTaGATCATCTCTGCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: SCQMERRLDSIRPFASLECFLLS*IISALV
Trigger: GACAAGGGCAGAGATGATCCAGGACAACAGGAAACA...TTCCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR CCA 90 bp AGATCATCTATAGCCCACCAGTGCTCCCTTTTTGTGCTCCCTGCCTTTTCAATGTCCTTTTGCAGGCATTaGTCCAATAATATCCTCATC +
Preference number: 4 (lower is better)
Translates to: RSSIAHQCSLFVLPAFSMSFCRH*SNNILI
Trigger: GATGAGGATATTATTGGACCAATGCCTGCAAAAGGA...CATTGAAAAGGCAGGGAGCACAAAAAGGGAGCACTGGTGGGCTATAGATGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CCA 90 bp AGATCATCTATAGCCCACCAGTGCTCCCTTTTTGTGCTCCCTGCCTTTTCAATGTCTCTTAAAAGTCCTTaGCCCAAGACCAAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: RSSIAHQCSLFVLPAFSMSLKSP*PKTKVF
Trigger: AAAGACTTTGGTCTTGGGCCAAGGACTTTTAAGAGA...CATTGAAAAGGCAGGGAGCACAAAAAGGGAGCACTGGTGGGCTATAGATGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CCA 90 bp TCTCCTGCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTTGCATCTTTGGGCTGTCGATGTTAATTaGGTGCTATCTCCAACCACT +
Preference number: 4 (lower is better)
Translates to: SPARWKGDLIQLGLLHLWAVDVN*VLSPTT
Trigger: AGTGGTTGGAGATAGCACCCAATTAACATCGACAGC...CCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR CCA 90 bp TCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAAGTATTGCTGGTGCTGGGTGTAAGAACCATCTaGCCAACTCCAATGTCATGT +
Preference number: 4 (lower is better)
Translates to: SLKRSDNPFFKRQVLLVLGVRTI*PTPMSC
Trigger: ACATGACATTGGAGTTGGCCAGATGGTTCTTACACC...CAGCACCAGCAATACTTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CCA 90 bp AAGGTAGTAACTCCTGGAAGCAATAGGCGGAAAGCAGAGGTTTCTCTCCTTCATATGTCTCCTGCCAGATaGAAAGGAGACTTGATTCAA +
Preference number: 4 (lower is better)
Translates to: KVVTPGSNRRKAEVSLLHMSPAR*KGDLIQ
Trigger: TTGAATCAAGTCTCCTTTCCATCTGGCAGGAGACAT...ATGAAGGAGAGAAACCTCTGCTTTCCGCCTATTGCTTCCAGGAGTTACTACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497558.5
3UTR CAA 72 bp GCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTaGCATCTTTGGAAGTGGGGAGGGGATGAAATAAAG +
Preference number: 4 (lower is better)
Translates to: ARWKGDLIQLGL*HLWKWGGDEIK
Trigger: CTTTATTTCATCCCCTCCCCACTTCCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR TCA 90 bp TCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAAGTATTGCTGGTGCTGACAGGTCCTGTGATATaGAGAACAATGGAATCTTGG +
Preference number: 4 (lower is better)
Translates to: SLKRSDNPFFKRQVLLVLTGPVI*RTMESW
Trigger: CCAAGATTCCATTGTTCTTCATATCACAGGACCTGT...CAGCACCAGCAATACTTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR GCA 90 bp TTAAATGGCCCCAAGTCAGCCAGGGACAAGGAACTACAATCTGACTATTCCTCTTTGTATGAAGATACCTaGTCAGCCAGTCTCTTATCT +
Preference number: 4 (lower is better)
Translates to: LNGPKSARDKELQSDYSSLYEDT*SASLLS
Trigger: AGATAAGAGACTGGCTGAGCAGGTATCTTCATACAA...AGAGGAATAGTCAGATTGTAGTTCCTTGTCCCTGGCTGACTTGGGGCCATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR GCA 90 bp AGGCATTCAGTCTTAAATGGCCCCAAGTCAGCCAGGGACAAGGAACTACAATCTAAAACATATTGCCTTTaGCGTGTGAAAATCTGGTGT +
Preference number: 4 (lower is better)
Translates to: RHSVLNGPKSARDKELQSKTYCL*RVKIWC
Trigger: ACACCAGATTTTCACACGGCAAAGGCAATATGTTTT...AGATTGTAGTTCCTTGTCCCTGGCTGACTTGGGGCCATTTAAGACTGAATGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CCA 90 bp TCCTGCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTTGCATCTTTGGAAATGCAGGACCTATTATaGGCCTTGGAGGAGAATCAT +
Preference number: 4 (lower is better)
Translates to: SCQMERRLDSIRPFASLEMQDLL*ALEENH
Trigger: ATGATTCTCCTCCAAGGCCCATAATAGGTCCTGCAT...TTCCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR CCA 90 bp AGATCATCTATAGCCCACCAGTGCTCCCTTTTTGTGCTCCCTGCCTTTTCAATGTTTAATGAAACCAGGTaGCAATGCAGGACCTATTAT +
Preference number: 4 (lower is better)
Translates to: RSSIAHQCSLFVLPAFSMFNETR*QCRTYY
Trigger: ATAATAGGTCCTGCATTGCCACCTGGTTTCATTAAA...CATTGAAAAGGCAGGGAGCACAAAAAGGGAGCACTGGTGGGCTATAGATGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CCA 90 bp GAATGGCCTGGGATAATTGTTAAAAGTGAAGATGCTCTGATTCTAACCCCAAAGTGTTTCCTGTTGTCCTaGATCATCTCTGCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: EWPGIIVKSEDALILTPKCFLLS*IISALV
Trigger: GACAAGGGCAGAGATGATCCAGGACAACAGGAAACA...CTTTGGGGTTAGAATCAGAGCATCTTCACTTTTAACAATTATCCCAGGCCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CCA 90 bp AAGGTAGTAACTCCTGGAAGCAATAGGCGGAAAGCAGAGGTTTCTCTCCTTCATTCTCTTAAAAGTCCTTaGCCCAAGACCAAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: KVVTPGSNRRKAEVSLLHSLKSP*PKTKVF
Trigger: AAAGACTTTGGTCTTGGGCCAAGGACTTTTAAGAGA...ATGAAGGAGAGAAACCTCTGCTTTCCGCCTATTGCTTCCAGGAGTTACTACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR CCA 90 bp AATTTCTTAATCACCATTCTGAACCCTTGTCAGATTGGGCTATGGATGAATATTGCTGCCTTGAATTCCTaGGCTCAAGGGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: NFLITILNPCQIGLWMNIAALNS*AQGILP
Trigger: TGGGAGGATCCCTTGAGCCCAGGAATTCAAGGCAGC...AATATTCATCCATAGCCCAATCTGACAAGGGTTCAGAATGGTGATTAAGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR CCA 90 bp TCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAAGTATTGCTGGTGCTGTTCACCTCCCAGGACTaGGTTAGATGTTCCTATATA +
Preference number: 4 (lower is better)
Translates to: SLKRSDNPFFKRQVLLVLFTSQD*VRCSYI
Trigger: TATATAGGAACATCTAACCCAGTCCTGGGAGGTGAA...CAGCACCAGCAATACTTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR TCA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAACACTGGTCACAGATATaGGTCTATCCACGAACGTCA +
Preference number: 4 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKHWSQI*VYPRTS
Trigger: TGACGTTCGTGGATAGACTCATATCTGTGACCAGTG...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR TCA 90 bp AAGGTAGTAACTCCTGGAAGCAATAGGCGGAAAGCAGAGGTTTCTCTCCTTCATTACAATGGGTTTAGATaGATCATCATCTCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: KVVTPGSNRRKAEVSLLHYNGFR*IIISFG
Trigger: ACCAAAGGAGATGATGATTCATCTAAACCCATTGTA...ATGAAGGAGAGAAACCTCTGCTTTCCGCCTATTGCTTCCAGGAGTTACTACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR TCA 90 bp TCTCCTGCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTTGCATCTTTGGTCAGAAAGCTTTGGTTaGGATCAGAGATTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: SPARWKGDLIQLGLLHLWSESFG*DQRLSL
Trigger: AAGACTCAATCTCTGATCTCAACCAAAGCTTTCTGA...CCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR TCA 90 bp TCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAAGTATTGCTGGTGCTGTATAGGGAAATGATCTaGGAAAGCAAAGGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: SLKRSDNPFFKRQVLLVLYREMI*ESKGSL
Trigger: AAGAGAGCCTTTGCTTTCTCAGATCATTTCCCTATA...CAGCACCAGCAATACTTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR TCA 90 bp GAATGGCCTGGGATAATTGTTAAAAGTGAAGATGCTCTGATTCTAACCCCAAAGTGGCTGGTAGATGTTTaGAGGGTGAATGCTTTTAGG +
Preference number: 4 (lower is better)
Translates to: EWPGIIVKSEDALILTPKWLVDV*RVNAFR
Trigger: CCTAAAAGCATTCACCCTTCAAACATCTACCAGCCA...CTTTGGGGTTAGAATCAGAGCATCTTCACTTTTAACAATTATCCCAGGCCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR GCA 90 bp TCCTGCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTTGCATCTTTGGAATCGATGTTAATTGGGTaGTATCTCCAACCACTTTCC +
Preference number: 4 (lower is better)
Translates to: SCQMERRLDSIRPFASLESMLIG*YLQPLS
Trigger: GGAAAGTGGTTGGAGATAGCACCCAATTAACATCGA...TTCCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR GCA 90 bp TCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAAGTATTGCTGGTGCTGAAGCTTCAGGGCATTTaGATATGTGATCAGTCACTT +
Preference number: 4 (lower is better)
Translates to: SLKRSDNPFFKRQVLLVLKLQGI*ICDQSL
Trigger: AAGTGACTGATCACATATGCAAATGCCCTGAAGCTT...CAGCACCAGCAATACTTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR GCA 90 bp AAGGTAGTAACTCCTGGAAGCAATAGGCGGAAAGCAGAGGTTTCTCTCCTTCATTCAACTTTTCTTCATTaGACAGGGAAATCCCCTTAT +
Preference number: 4 (lower is better)
Translates to: KVVTPGSNRRKAEVSLLHSTFLH*TGKSPY
Trigger: ATAAGGGGATTTCCCTGTGCAATGAAGAAAAGTTGA...ATGAAGGAGAGAAACCTCTGCTTTCCGCCTATTGCTTCCAGGAGTTACTACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR CCA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAATGTTTCCTGTTGTCCTaGATCATCTCTGCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKCFLLS*IISALV
Trigger: GACAAGGGCAGAGATGATCCAGGACAACAGGAAACA...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR CCA 90 bp AAGGTAGTAACTCCTGGAAGCAATAGGCGGAAAGCAGAGGTTTCTCTCCTTCATCTTCATCTTTCTTACTaGATGACTTCCTTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: KVVTPGSNRRKAEVSLLHLHLSY*MTSLLL
Trigger: AAGAAGCAAGGAAGTCATCCAGTAAGAAAGATGAAG...ATGAAGGAGAGAAACCTCTGCTTTCCGCCTATTGCTTCCAGGAGTTACTACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR CCA 90 bp AAGGTAGTAACTCCTGGAAGCAATAGGCGGAAAGCAGAGGTTTCTCTCCTTCATTTTATCACGGTCAAATaGTATTCTCTCTTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: KVVTPGSNRRKAEVSLLHFITVK*YSLLRL
Trigger: AAGCCTCAAGAGAGAATACCATTTGACCGTGATAAA...ATGAAGGAGAGAAACCTCTGCTTTCCGCCTATTGCTTCCAGGAGTTACTACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR CCA 90 bp ACCAAAGAACTAAAGCTTCAGGGCATTTGCATATGTGATCAGTCACTTTTCACAGTAGTTCCAGCTACTTaGGAGACTGAGACAGGAGAA +
Preference number: 4 (lower is better)
Translates to: TKELKLQGICICDQSLFTVVPAT*ETETGE
Trigger: TTCTCCTGTCTCAGTCTCCCAAGTAGCTGGAACTAC...TGTGAAAAGTGACTGATCACATATGCAAATGCCCTGAAGCTTTAGTTCTTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CCA 90 bp GAATGGCCTGGGATAATTGTTAAAAGTGAAGATGCTCTGATTCTAACCCCAAAGGCTGTCGATGTTAATTaGGTGCTATCTCCAACCACT +
Preference number: 4 (lower is better)
Translates to: EWPGIIVKSEDALILTPKAVDVN*VLSPTT
Trigger: AGTGGTTGGAGATAGCACCCAATTAACATCGACAGC...CTTTGGGGTTAGAATCAGAGCATCTTCACTTTTAACAATTATCCCAGGCCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CCA 90 bp AAGGTAGTAACTCCTGGAAGCAATAGGCGGAAAGCAGAGGTTTCTCTCCTTCATCATTCCTATGACACTTaGCCAAGAAATGTAGGAAAT +
Preference number: 4 (lower is better)
Translates to: KVVTPGSNRRKAEVSLLHHSYDT*PRNVGN
Trigger: ATTTCCTACATTTCTTGGCCAAGTGTCATAGGAATG...ATGAAGGAGAGAAACCTCTGCTTTCCGCCTATTGCTTCCAGGAGTTACTACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR TCA 90 bp TCCTGCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTTGCATCTTTGGAAAAGTTCAGTCATCCATaGCTCTCTTACAATGGGTTT +
Preference number: 4 (lower is better)
Translates to: SCQMERRLDSIRPFASLEKFSHP*LSYNGF
Trigger: AAACCCATTGTAAGAGAGTCATGGATGACTGAACTT...TTCCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR TCA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAAAGTATCTGTCCAGATTaGTCGATCTCCAGATGTGTC +
Preference number: 4 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKSICPD*SISRCV
Trigger: GACACATCTGGAGATCGATCAATCTGGACAGATACT...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR TCA 90 bp AATATTCTTGTATTGGGATTAGTCTCTCTGTGGGGCAAAACAACCTCTGAAACTAGTATCTGTCCAGATTaGTCGATCTCCAGATGTGTC +
Preference number: 4 (lower is better)
Translates to: NILVLGLVSLWGKTTSETSICPD*SISRCV
Trigger: GACACATCTGGAGATCGATCAATCTGGACAGATACT...AGTTTCAGAGGTTGTTTTGCCCCACAGAGAGACTAATCCCAATACAAGAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR TCA 90 bp GAATGGCCTGGGATAATTGTTAAAAGTGAAGATGCTCTGATTCTAACCCCAAAGCAAAGGCTCTCTTTTTaGCCCTACATGTTCAGATTC +
Preference number: 4 (lower is better)
Translates to: EWPGIIVKSEDALILTPKQRLSF*PYMFRF
Trigger: GAATCTGAACATGTAGGGTCAAAAAGAGAGCCTTTG...CTTTGGGGTTAGAATCAGAGCATCTTCACTTTTAACAATTATCCCAGGCCATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR GCA 90 bp AACCATCTGGCCAACTCCAATGTCATGTTTATAACTTGGTTAAGAAGTATTCTCGTCCTGGATCATCTCTaGCCTTGTCACTTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: NHLANSNVMFITWLRSILVLDHL*PCHFSV
Trigger: CACAGAAAAGTGACAAGGGCAGAGATGATCCAGGAC...GAGAATACTTCTTAACCAAGTTATAAACATGACATTGGAGTTGGCCAGATGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR GCA 90 bp TCTCCTGCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTTGCATCTTTGGAAAACATATTGCCTTTaGCGTGTGAAAATCTGGTGT +
Preference number: 4 (lower is better)
Translates to: SPARWKGDLIQLGLLHLWKTYCL*RVKIWC
Trigger: ACACCAGATTTTCACACGGCAAAGGCAATATGTTTT...CCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR GCA 90 bp AATTTCTTAATCACCATTCTGAACCCTTGTCAGATTGGGCTATGGATGAATATTATCACAGCTCACTGCTaGCTTGAATTCCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: NFLITILNPCQIGLWMNIITAHC*LEFLGS
Trigger: TGAGCCCAGGAATTCAAGGCAGCAGTGAGCTGTGAT...AATATTCATCCATAGCCCAATCTGACAAGGGTTCAGAATGGTGATTAAGAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR GCA 90 bp ACCAAAGAACTAAAGCTTCAGGGCATTTGCATATGTGATCAGTCACTTTTCACATACAGATGCATGCCATaGCACCATGCCCAGATAATT +
Preference number: 4 (lower is better)
Translates to: TKELKLQGICICDQSLFTYRCMP*HHAQII
Trigger: AATTATCTGGGCATGGTGGCATGGCATGCATCTGTA...TGTGAAAAGTGACTGATCACATATGCAAATGCCCTGAAGCTTTAGTTCTTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR GCA 90 bp TTAAATGGCCCCAAGTCAGCCAGGGACAAGGAACTACAATCTGACTATTCCTCTGTTAGCAAAATGTGTTaGTTTCAGCCATTACCTAAA +
Preference number: 4 (lower is better)
Translates to: LNGPKSARDKELQSDYSSVSKMC*FQPLPK
Trigger: TTTAGGTAATGGCTGAAAGCAACACATTTTGCTAAC...AGAGGAATAGTCAGATTGTAGTTCCTTGTCCCTGGCTGACTTGGGGCCATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CCA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAAACCTATTATGGGCCTTaGAGGAGAATCATCCTGCTT +
Preference number: 4 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKTYYGP*RRIILL
Trigger: AAGCAGGATGATTCTCCTCCAAGGCCCATAATAGGT...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR CCA 90 bp ACCAAAGAACTAAAGCTTCAGGGCATTTGCATATGTGATCAGTCACTTTTCACAATGCAGGACCTATTATaGGCCTTGGAGGAGAATCAT +
Preference number: 4 (lower is better)
Translates to: TKELKLQGICICDQSLFTMQDLL*ALEENH
Trigger: ATGATTCTCCTCCAAGGCCCATAATAGGTCCTGCAT...TGTGAAAAGTGACTGATCACATATGCAAATGCCCTGAAGCTTTAGTTCTTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CCA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAAATGCAGGACCTATTATaGGCCTTGGAGGAGAATCAT +
Preference number: 4 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKMQDLL*ALEENH
Trigger: ATGATTCTCCTCCAAGGCCCATAATAGGTCCTGCAT...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR CCA 90 bp TCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAAGTATTGCTGGTGCTGTACATTATAGTTAACTaGTCCTTTTGCAGGCATTGG +
Preference number: 4 (lower is better)
Translates to: SLKRSDNPFFKRQVLLVLYIIVN*SFCRHW
Trigger: CCAATGCCTGCAAAAGGACCAGTTAACTATAATGTA...CAGCACCAGCAATACTTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CCA 90 bp TCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAAGTATTGCTGGTGCTGCTTCATCTTTCTTACTaGATGACTTCCTTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SLKRSDNPFFKRQVLLVLLHLSY*MTSLLL
Trigger: AAGAAGCAAGGAAGTCATCCAGTAAGAAAGATGAAG...CAGCACCAGCAATACTTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CCA 90 bp TCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAAGTATTGCTGGTGCTGTTTATCACGGTCAAATaGTATTCTCTCTTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: SLKRSDNPFFKRQVLLVLFITVK*YSLLRL
Trigger: AAGCCTCAAGAGAGAATACCATTTGACCGTGATAAA...CAGCACCAGCAATACTTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR TCA 90 bp GAATGGCCTGGGATAATTGTTAAAAGTGAAGATGCTCTGATTCTAACCCCAAAGTCATCGTCATCATCCTaGTTTTTCCTCTGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: EWPGIIVKSEDALILTPKSSSSS*FFLCFL
Trigger: CAGAAAACAGAGGAAAAATCAGGATGATGACGATGA...CTTTGGGGTTAGAATCAGAGCATCTTCACTTTTAACAATTATCCCAGGCCATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR TCA 90 bp AATGCTTTTAGGCATTCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAAATGAAGACCCAACCCTaGACCATCATATTTCTCACA +
Preference number: 4 (lower is better)
Translates to: NAFRHSLKRSDNPFFKRQMKTQP*TIIFLT
Trigger: TGTGAGAAATATGATGGTTCAGGGTTGGGTCTTCAT...TTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGAATGCCTAAAAGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR GCA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAATTTCCTCTGTTTTCTTaGAGTTGGACCACTGTCATC +
Preference number: 4 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKFPLFS*SWTTVI
Trigger: GATGACAGTGGTCCAACTGCAAGAAAACAGAGGAAA...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR GCA 90 bp AATGCTTTTAGGCATTCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAAGGAGGAGAATCATCCTaGTTTTTAAATCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: NAFRHSLKRSDNPFFKRQGGESS*FLNPGG
Trigger: TCCTCCTGGATTTAAAAAGCAGGATGATTCTCCTCC...TTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGAATGCCTAAAAGCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR GCA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAAGGAGGAGAATCATCCTaGTTTTTAAATCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKGGESS*FLNPGG
Trigger: TCCTCCTGGATTTAAAAAGCAGGATGATTCTCCTCC...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR GCA 90 bp AATTTCTTAATCACCATTCTGAACCCTTGTCAGATTGGGCTATGGATGAATATTGTCCTGGATCATCTCTaGCCTTGTCACTTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: NFLITILNPCQIGLWMNIVLDHL*PCHFSV
Trigger: CACAGAAAAGTGACAAGGGCAGAGATGATCCAGGAC...AATATTCATCCATAGCCCAATCTGACAAGGGTTCAGAATGGTGATTAAGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR GCA 90 bp CCAGGGACAAGGAACTACAATCTGACTATTCCTCTTAGGGACTTATCTATTTTATCGATGTTAATTGGGTaGTATCTCCAACCACTTTCC +
Preference number: 4 (lower is better)
Translates to: PGTRNYNLTIPLRDLSILSMLIG*YLQPLS
Trigger: GGAAAGTGGTTGGAGATAGCACCCAATTAACATCGA...TAAAATAGATAAGTCCCTAAGAGGAATAGTCAGATTGTAGTTCCTTGTCCCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CCA 90 bp AATTTCTTAATCACCATTCTGAACCCTTGTCAGATTGGGCTATGGATGAATATTTGTTTCCTGTTGTCCTaGATCATCTCTGCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: NFLITILNPCQIGLWMNICFLLS*IISALV
Trigger: GACAAGGGCAGAGATGATCCAGGACAACAGGAAACA...AATATTCATCCATAGCCCAATCTGACAAGGGTTCAGAATGGTGATTAAGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR CCA 90 bp TCCTGCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTTGCATCTTTGGAATACATTATAGTTAACTaGTCCTTTTGCAGGCATTGG +
Preference number: 4 (lower is better)
Translates to: SCQMERRLDSIRPFASLEYIIVN*SFCRHW
Trigger: CCAATGCCTGCAAAAGGACCAGTTAACTATAATGTA...TTCCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR CCA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAAGAACCCTTGTCAGATTaGGCTATGGATGAATATTGG +
Preference number: 4 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKEPLSD*AMDEYW
Trigger: CCAATATTCATCCATAGCCCAATCTGACAAGGGTTC...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR CCA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAAGGACTCAGAAAGCTTTaGTTGAGATCAGAGATTGAG +
Preference number: 4 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKGLRKL*LRSEIE
Trigger: CTCAATCTCTGATCTCAACCAAAGCTTTCTGAGTCC...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR CCA 90 bp TCCTGCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTTGCATCTTTGGAATCCTTTAGTTTGCTATaGTTTACACTGATGCTATGG +
Preference number: 4 (lower is better)
Translates to: SCQMERRLDSIRPFASLESFSLL*FTLMLW
Trigger: CCATAGCATCAGTGTAAACCATAGCAAACTAAAGGA...TTCCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497558.5
3UTR CAA 72 bp CTTATTAAAATGTCTCCTGCCAGATGGAAAGGAGACTaGATTCAATTAGGCCTTTTGCATCTTTGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: LIKMSPARWKGD*IQLGLLHLWKW
Trigger: CCACTTCCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGAGACATTTTAATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR TCA 90 bp GAATGGCCTGGGATAATTGTTAAAAGTGAAGATGCTCTGATTCTAACCCCAAAGTACAATGGGTTTAGATaGATCATCATCTCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: EWPGIIVKSEDALILTPKYNGFR*IIISFG
Trigger: ACCAAAGGAGATGATGATTCATCTAAACCCATTGTA...CTTTGGGGTTAGAATCAGAGCATCTTCACTTTTAACAATTATCCCAGGCCATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR TCA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAAAAGTTCAGTCATCCATaGCTCTCTTACAATGGGTTT +
Preference number: 4 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKKFSHP*LSYNGF
Trigger: AAACCCATTGTAAGAGAGTCATGGATGACTGAACTT...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR TCA 90 bp AATTTCTTAATCACCATTCTGAACCCTTGTCAGATTGGGCTATGGATGAATATTAGTATCTGTCCAGATTaGTCGATCTCCAGATGTGTC +
Preference number: 4 (lower is better)
Translates to: NFLITILNPCQIGLWMNISICPD*SISRCV
Trigger: GACACATCTGGAGATCGATCAATCTGGACAGATACT...AATATTCATCCATAGCCCAATCTGACAAGGGTTCAGAATGGTGATTAAGAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR TCA 90 bp AATTTCTTAATCACCATTCTGAACCCTTGTCAGATTGGGCTATGGATGAATATTTTTACAGTAAGGACTTaGCACACTGACTCTAGGGCA +
Preference number: 4 (lower is better)
Translates to: NFLITILNPCQIGLWMNIFTVRT*HTDSRA
Trigger: TGCCCTAGAGTCAGTGTGTCAAGTCCTTACTGTAAA...AATATTCATCCATAGCCCAATCTGACAAGGGTTCAGAATGGTGATTAAGAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR TCA 90 bp AATATTCTTGTATTGGGATTAGTCTCTCTGTGGGGCAAAACAACCTCTGAAACTAAGGCTATTCATGACTaGTATGACCCCCGTAAATTA +
Preference number: 4 (lower is better)
Translates to: NILVLGLVSLWGKTTSETKAIHD*YDPRKL
Trigger: TAATTTACGGGGGTCATATCAGTCATGAATAGCCTT...AGTTTCAGAGGTTGTTTTGCCCCACAGAGAGACTAATCCCAATACAAGAATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR TCA 90 bp AATGCTTTTAGGCATTCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAATGCTTTACTTATCTGTaGATACCCTATAAGGGACCA +
Preference number: 4 (lower is better)
Translates to: NAFRHSLKRSDNPFFKRQCFTYL*IPYKGP
Trigger: TGGTCCCTTATAGGGTATTCACAGATAAGTAAAGCA...TTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGAATGCCTAAAAGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR TCA 90 bp ACCAAAGAACTAAAGCTTCAGGGCATTTGCATATGTGATCAGTCACTTTTCACAAGGTTTCAGCTTAAATaGCACATCTTCAGAGACTTC +
Preference number: 4 (lower is better)
Translates to: TKELKLQGICICDQSLFTRFQLK*HIFRDF
Trigger: GAAGTCTCTGAAGATGTGTCATTTAAGCTGAAACCT...TGTGAAAAGTGACTGATCACATATGCAAATGCCCTGAAGCTTTAGTTCTTTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR GCA 90 bp AATATTCTTGTATTGGGATTAGTCTCTCTGTGGGGCAAAACAACCTCTGAAACTGTTAACTGGTCCTTTTaGAGGCATTGGTCCAATAAT +
Preference number: 4 (lower is better)
Translates to: NILVLGLVSLWGKTTSETVNWSF*RHWSNN
Trigger: ATTATTGGACCAATGCCTGCAAAAGGACCAGTTAAC...AGTTTCAGAGGTTGTTTTGCCCCACAGAGAGACTAATCCCAATACAAGAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR GCA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAATTGTATGAAGATACCTaGTCAGCCAGTCTCTTATCT +
Preference number: 4 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKLYEDT*SASLLS
Trigger: AGATAAGAGACTGGCTGAGCAGGTATCTTCATACAA...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR GCA 90 bp AATATTCTTGTATTGGGATTAGTCTCTCTGTGGGGCAAAACAACCTCTGAAACTTTGTATGAAGATACCTaGTCAGCCAGTCTCTTATCT +
Preference number: 4 (lower is better)
Translates to: NILVLGLVSLWGKTTSETLYEDT*SASLLS
Trigger: AGATAAGAGACTGGCTGAGCAGGTATCTTCATACAA...AGTTTCAGAGGTTGTTTTGCCCCACAGAGAGACTAATCCCAATACAAGAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR CCA 90 bp AATTTCTTAATCACCATTCTGAACCCTTGTCAGATTGGGCTATGGATGAATATTATGCAGGACCTATTATaGGCCTTGGAGGAGAATCAT +
Preference number: 4 (lower is better)
Translates to: NFLITILNPCQIGLWMNIMQDLL*ALEENH
Trigger: ATGATTCTCCTCCAAGGCCCATAATAGGTCCTGCAT...AATATTCATCCATAGCCCAATCTGACAAGGGTTCAGAATGGTGATTAAGAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR CCA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAATCCTTTTGCAGGCATTaGTCCAATAATATCCTCATC +
Preference number: 4 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKSFCRH*SNNILI
Trigger: GATGAGGATATTATTGGACCAATGCCTGCAAAAGGA...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR CCA 90 bp AATATTCTTGTATTGGGATTAGTCTCTCTGTGGGGCAAAACAACCTCTGAAACTTCCTTTTGCAGGCATTaGTCCAATAATATCCTCATC +
Preference number: 4 (lower is better)
Translates to: NILVLGLVSLWGKTTSETSFCRH*SNNILI
Trigger: GATGAGGATATTATTGGACCAATGCCTGCAAAAGGA...AGTTTCAGAGGTTGTTTTGCCCCACAGAGAGACTAATCCCAATACAAGAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR CCA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAATCTCTTAAAAGTCCTTaGCCCAAGACCAAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKSLKSP*PKTKVF
Trigger: AAAGACTTTGGTCTTGGGCCAAGGACTTTTAAGAGA...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR CCA 90 bp ACCAAAGAACTAAAGCTTCAGGGCATTTGCATATGTGATCAGTCACTTTTCACATGGTCACTTTCAATTTaGGAGTTAGAGAGACCAAAC +
Preference number: 4 (lower is better)
Translates to: TKELKLQGICICDQSLFTWSLSI*ELERPN
Trigger: GTTTGGTCTCTCTAACTCCCAAATTGAAAGTGACCA...TGTGAAAAGTGACTGATCACATATGCAAATGCCCTGAAGCTTTAGTTCTTTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CCA 90 bp TCCTGCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTTGCATCTTTGGAACCTATCACAGTAATGTaGTTACTATTTGAAGCATCT +
Preference number: 4 (lower is better)
Translates to: SCQMERRLDSIRPFASLEPITVM*LLFEAS
Trigger: AGATGCTTCAAATAGTAACCACATTACTGTGATAGG...TTCCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR TCA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAATCATCGTCATCATCCTaGTTTTTCCTCTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKSSSSS*FFLCFL
Trigger: AAGAAAACAGAGGAAAAATCAGGATGATGACGATGA...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR TCA 90 bp AATATTCTTGTATTGGGATTAGTCTCTCTGTGGGGCAAAACAACCTCTGAAACTTCATCGTCATCATCCTaGTTTTTCCTCTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: NILVLGLVSLWGKTTSETSSSSS*FFLCFL
Trigger: AAGAAAACAGAGGAAAAATCAGGATGATGACGATGA...AGTTTCAGAGGTTGTTTTGCCCCACAGAGAGACTAATCCCAATACAAGAATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR TCA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAATACAATGGGTTTAGATaGATCATCATCTCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKYNGFR*IIISFG
Trigger: ACCAAAGGAGATGATGATTCATCTAAACCCATTGTA...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR TCA 90 bp AACCATCTGGCCAACTCCAATGTCATGTTTATAACTTGGTTAAGAAGTATTCTCCTGTTACAGGTCCTGTaGTATGAAGAACAATGGAAT +
Preference number: 4 (lower is better)
Translates to: NHLANSNVMFITWLRSILLLQVL*YEEQWN
Trigger: ATTCCATTGTTCTTCATATCACAGGACCTGTAACAG...GAGAATACTTCTTAACCAAGTTATAAACATGACATTGGAGTTGGCCAGATGGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR GCA 90 bp AATTTCTTAATCACCATTCTGAACCCTTGTCAGATTGGGCTATGGATGAATATTTTTCCTCTGTTTTCTTaGAGTTGGACCACTGTCATC +
Preference number: 4 (lower is better)
Translates to: NFLITILNPCQIGLWMNIFPLFS*SWTTVI
Trigger: GATGACAGTGGTCCAACTGCAAGAAAACAGAGGAAA...AATATTCATCCATAGCCCAATCTGACAAGGGTTCAGAATGGTGATTAAGAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR GCA 90 bp AATTTCTTAATCACCATTCTGAACCCTTGTCAGATTGGGCTATGGATGAATATTGGAGGAGAATCATCCTaGTTTTTAAATCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: NFLITILNPCQIGLWMNIGGESS*FLNPGG
Trigger: TCCTCCTGGATTTAAAAAGCAGGATGATTCTCCTCC...AATATTCATCCATAGCCCAATCTGACAAGGGTTCAGAATGGTGATTAAGAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR GCA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAAAAAACATATTGCCTTTaGCGTGTGAAAATCTGGTGT +
Preference number: 4 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKKTYCL*RVKIWC
Trigger: ACACCAGATTTTCACACGGCAAAGGCAATATGTTTT...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
38% GC, longest homopolymer 8 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR GCA 90 bp CCAGGGACAAGGAACTACAATCTGACTATTCCTCTTAGGGACTTATCTATTTTAGAAGAGAGGGCAAAGTaGAATGAAACTGAATTATCA +
Preference number: 4 (lower is better)
Translates to: PGTRNYNLTIPLRDLSILEERAK*NETELS
Trigger: TGATAATTCAGTTTCATTGCACTTTGCCCTCTCTTC...TAAAATAGATAAGTCCCTAAGAGGAATAGTCAGATTGTAGTTCCTTGTCCCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CCA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAATTTAATGAAACCAGGTaGCAATGCAGGACCTATTAT +
Preference number: 4 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKFNETR*QCRTYY
Trigger: ATAATAGGTCCTGCATTGCCACCTGGTTTCATTAAA...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR CCA 90 bp AATATTCTTGTATTGGGATTAGTCTCTCTGTGGGGCAAAACAACCTCTGAAACTTTTAATGAAACCAGGTaGCAATGCAGGACCTATTAT +
Preference number: 4 (lower is better)
Translates to: NILVLGLVSLWGKTTSETFNETR*QCRTYY
Trigger: ATAATAGGTCCTGCATTGCCACCTGGTTTCATTAAA...AGTTTCAGAGGTTGTTTTGCCCCACAGAGAGACTAATCCCAATACAAGAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR CCA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAATACATTATAGTTAACTaGTCCTTTTGCAGGCATTGG +
Preference number: 4 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKYIIVN*SFCRHW
Trigger: CCAATGCCTGCAAAAGGACCAGTTAACTATAATGTA...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR CCA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAATTTATCACGGTCAAATaGTATTCTCTCTTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKFITVK*YSLLRL
Trigger: AAGCCTCAAGAGAGAATACCATTTGACCGTGATAAA...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR CCA 90 bp AATTTCTTAATCACCATTCTGAACCCTTGTCAGATTGGGCTATGGATGAATATTGAACCCTTGTCAGATTaGGCTATGGATGAATATTGG +
Preference number: 4 (lower is better)
Translates to: NFLITILNPCQIGLWMNIEPLSD*AMDEYW
Trigger: CCAATATTCATCCATAGCCCAATCTGACAAGGGTTC...AATATTCATCCATAGCCCAATCTGACAAGGGTTCAGAATGGTGATTAAGAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR CCA 90 bp AATTTCTTAATCACCATTCTGAACCCTTGTCAGATTGGGCTATGGATGAATATTGGACTCAGAAAGCTTTaGTTGAGATCAGAGATTGAG +
Preference number: 4 (lower is better)
Translates to: NFLITILNPCQIGLWMNIGLRKL*LRSEIE
Trigger: CTCAATCTCTGATCTCAACCAAAGCTTTCTGAGTCC...AATATTCATCCATAGCCCAATCTGACAAGGGTTCAGAATGGTGATTAAGAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR TCA 90 bp AATTTCTTAATCACCATTCTGAACCCTTGTCAGATTGGGCTATGGATGAATATTTCAGAAAGCTTTGGTTaGGATCAGAGATTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: NFLITILNPCQIGLWMNISESFG*DQRLSL
Trigger: AAGACTCAATCTCTGATCTCAACCAAAGCTTTCTGA...AATATTCATCCATAGCCCAATCTGACAAGGGTTCAGAATGGTGATTAAGAAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR TCA 90 bp AATTTCTTAATCACCATTCTGAACCCTTGTCAGATTGGGCTATGGATGAATATTAAGGCTATTCATGACTaGTATGACCCCCGTAAATTA +
Preference number: 4 (lower is better)
Translates to: NFLITILNPCQIGLWMNIKAIHD*YDPRKL
Trigger: TAATTTACGGGGGTCATATCAGTCATGAATAGCCTT...AATATTCATCCATAGCCCAATCTGACAAGGGTTCAGAATGGTGATTAAGAAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR TCA 90 bp AACCATCTGGCCAACTCCAATGTCATGTTTATAACTTGGTTAAGAAGTATTCTCAGTAGCATGAGCTTTTaGAACTGCAGACTTAAATCT +
Preference number: 4 (lower is better)
Translates to: NHLANSNVMFITWLRSILSSMSF*NCRLKS
Trigger: AGATTTAAGTCTGCAGTTTCAAAAGCTCATGCTACT...GAGAATACTTCTTAACCAAGTTATAAACATGACATTGGAGTTGGCCAGATGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR GCA 90 bp AATTTCTTAATCACCATTCTGAACCCTTGTCAGATTGGGCTATGGATGAATATTGTTAACTGGTCCTTTTaGAGGCATTGGTCCAATAAT +
Preference number: 4 (lower is better)
Translates to: NFLITILNPCQIGLWMNIVNWSF*RHWSNN
Trigger: ATTATTGGACCAATGCCTGCAAAAGGACCAGTTAAC...AATATTCATCCATAGCCCAATCTGACAAGGGTTCAGAATGGTGATTAAGAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR GCA 90 bp AATTTCTTAATCACCATTCTGAACCCTTGTCAGATTGGGCTATGGATGAATATTTTGTATGAAGATACCTaGTCAGCCAGTCTCTTATCT +
Preference number: 4 (lower is better)
Translates to: NFLITILNPCQIGLWMNILYEDT*SASLLS
Trigger: AGATAAGAGACTGGCTGAGCAGGTATCTTCATACAA...AATATTCATCCATAGCCCAATCTGACAAGGGTTCAGAATGGTGATTAAGAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR CCA 90 bp ACCAAAGAACTAAAGCTTCAGGGCATTTGCATATGTGATCAGTCACTTTTCACACAAAGTAACATTAACTaGTTAATTCCCCCAAGGAAA +
Preference number: 4 (lower is better)
Translates to: TKELKLQGICICDQSLFTQSNIN*LIPPRK
Trigger: TTTCCTTGGGGGAATTAACCAGTTAATGTTACTTTG...TGTGAAAAGTGACTGATCACATATGCAAATGCCCTGAAGCTTTAGTTCTTTGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR TCA 90 bp AATTTCTTAATCACCATTCTGAACCCTTGTCAGATTGGGCTATGGATGAATATTTCATCGTCATCATCCTaGTTTTTCCTCTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: NFLITILNPCQIGLWMNISSSSS*FFLCFL
Trigger: AAGAAAACAGAGGAAAAATCAGGATGATGACGATGA...AATATTCATCCATAGCCCAATCTGACAAGGGTTCAGAATGGTGATTAAGAAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR GCA 90 bp AATTTCTTAATCACCATTCTGAACCCTTGTCAGATTGGGCTATGGATGAATATTAAAACATATTGCCTTTaGCGTGTGAAAATCTGGTGT +
Preference number: 4 (lower is better)
Translates to: NFLITILNPCQIGLWMNIKTYCL*RVKIWC
Trigger: ACACCAGATTTTCACACGGCAAAGGCAATATGTTTT...AATATTCATCCATAGCCCAATCTGACAAGGGTTCAGAATGGTGATTAAGAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR CCA 90 bp AATTTCTTAATCACCATTCTGAACCCTTGTCAGATTGGGCTATGGATGAATATTTTTAATGAAACCAGGTaGCAATGCAGGACCTATTAT +
Preference number: 4 (lower is better)
Translates to: NFLITILNPCQIGLWMNIFNETR*QCRTYY
Trigger: ATAATAGGTCCTGCATTGCCACCTGGTTTCATTAAA...AATATTCATCCATAGCCCAATCTGACAAGGGTTCAGAATGGTGATTAAGAAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR CCA 90 bp AATTTCTTAATCACCATTCTGAACCCTTGTCAGATTGGGCTATGGATGAATATTTACATTATAGTTAACTaGTCCTTTTGCAGGCATTGG +
Preference number: 4 (lower is better)
Translates to: NFLITILNPCQIGLWMNIYIIVN*SFCRHW
Trigger: CCAATGCCTGCAAAAGGACCAGTTAACTATAATGTA...AATATTCATCCATAGCCCAATCTGACAAGGGTTCAGAATGGTGATTAAGAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR CCA 90 bp AATTTCTTAATCACCATTCTGAACCCTTGTCAGATTGGGCTATGGATGAATATTCTTCATCTTTCTTACTaGATGACTTCCTTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: NFLITILNPCQIGLWMNILHLSY*MTSLLL
Trigger: AAGAAGCAAGGAAGTCATCCAGTAAGAAAGATGAAG...AATATTCATCCATAGCCCAATCTGACAAGGGTTCAGAATGGTGATTAAGAAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
3UTR CAA 72 bp AATAGGAAAACAGAACATATAACAAAGGAGAGGGGATaGTTTATAGGAACACATGTAAGTGCGGTGGTTATT +
Preference number: 4 (lower is better)
Translates to: NRKTEHITKERG*FIGTHVSAVVI
Trigger: AATAACCACCGCACTTACATGTGTTCCTATAAACAATCCCCTCTCCTTTGTTATATGTTCTGTTTTCCTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS CCA 90 bp CTTCAGCGAGCAGGGCCCGGCCAGGGAGTGGGTAGATGGGCCTGGTaGGCAGCGGAGACGCCGCCGCTTACCAGGGCTCGGGTCCCGCTC +
Preference number: 5 (lower is better)
Translates to: LQRAGPGQGVGRWAW*AAETPPLTRARVPL
Trigger: GAGCGGGACCCGAGCCCTGGTAAGCGGCGGCGTCTCCGCTGCCCACCAGGCCCATCTACCCACTCCCTGGCCGGGCCCTGCTCGCTGAAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611650.1
CDS TCA 90 bp CAGGGCTCGGGTCCCGCTCTTCGTCCTCCGCTGTTCCGCGGGCCTTaGAGCCGGGCGGCAGGGCCGGTCCGATCAGGTCTCTTGCCATCC +
Preference number: 5 (lower is better)
Translates to: QGSGPALRPPLFRGP*SRAAGPVRSGLLPS
Trigger: GGATGGCAAGAGACCTGATCGGACCGGCCCTGCCGCCCGGCTTCAAGGCCCGCGGAACAGCGGAGGACGAAGAGCGGGACCCGAGCCCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361121.6
ENST00000379151.9
ENST00000479068.1
ENST00000497558.5
ENST00000611650.1
CDS CCA 90 bp TTTCTTCAGCGAGCAGGGCCCGGCCAGGGAGTGGGTAGATGGGCCTaGTGGGCAGCGGAGACGCCGCCGCTTACCAGGGCTCGGGTCCCG +
Preference number: 5 (lower is better)
Translates to: FLQRAGPGQGVGRWA*WAAETPPLTRARVP
Trigger: CGGGACCCGAGCCCTGGTAAGCGGCGGCGTCTCCGCTGCCCACCAGGCCCATCTACCCACTCCCTGGCCGGGCCCTGCTCGCTGAAGAAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611650.1
CDS CCA 90 bp CCTAGGCCTCCGACTTTCTTCAGCGAGCAGGGCCCGGCCAGGGAGTaGGTAGATGGGCCTGGTGGGCAGCGGAGACGCCGCCGCTTACCA +
Preference number: 5 (lower is better)
Translates to: PRPPTFFSEQGPARE*VDGPGGQRRRRRLP
Trigger: TGGTAAGCGGCGGCGTCTCCGCTGCCCACCAGGCCCATCTACCCACTCCCTGGCCGGGCCCTGCTCGCTGAAGAAAGTCGGAGGCCTAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611650.1
CDS GCA 90 bp GCGGGCCTTGAAGCCGGGCGGCAGGGCCGGTCCGATCAGGTCTCTTaGCATCCGCGGTGGCGGACACTGGTCACAGATATGAGTCTATCC +
Preference number: 5 (lower is better)
Translates to: AGLEAGRQGRSDQVS*HPRWRTLVTDMSLS
Trigger: GGATAGACTCATATCTGTGACCAGTGTCCGCCACCGCGGATGGCAAGAGACCTGATCGGACCGGCCCTGCCGCCCGGCTTCAAGGCCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361121.6
ENST00000379151.9
ENST00000479068.1
ENST00000611650.1
CDS CCA 90 bp GCCGGGCGGCAGGGCCGGTCCGATCAGGTCTCTTGCCATCCGCGGTaGCGGACACTGGTCACAGATATGAGTCTATCCACGAACGTCAAC +
Preference number: 5 (lower is better)
Translates to: AGRQGRSDQVSCHPR*RTLVTDMSLSTNVN
Trigger: GTTGACGTTCGTGGATAGACTCATATCTGTGACCAGTGTCCGCCACCGCGGATGGCAAGAGACCTGATCGGACCGGCCCTGCCGCCCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361121.6
ENST00000379151.9
ENST00000611650.1
CDS TCA 90 bp ACTGAGACAGGAGAACCACTTGAACTTAGGAGGCAGAGGCTACAGTaGGCTGAGATCGTGCCACCGGATTCCAGTCTGGGCTACAGAGTG +
Preference number: 5 (lower is better)
Translates to: TETGEPLELRRQRLQ*AEIVPPDSSLGYRV
Trigger: CACTCTGTAGCCCAGACTGGAATCCGGTGGCACGATCTCAGCTCACTGTAGCCTCTGCCTCCTAAGTTCAAGTGGTTCTCCTGTCTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CAA 90 bp TGTCAGTTATGTTTAGGAATGCAACCAGAGGAAGCCCAGAAGCCTAGAGCGTTAGTCCGATCAGGTCTCTaGCCATCCGCGGTGGCGGAC +
Preference number: 5 (lower is better)
Translates to: CQLCLGMQPEEAQKPRALVRSGL*PSAVAD
Trigger: GTCCGCCACCGCGGATGGCAAGAGACCTGATCGGAC...TAACGCTCTAGGCTTCTGGGCTTCCTCTGGTTGCATTCCTAAACATAACTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611650.1
CDS-3UTR CAA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAAGCTGTTCCGCGGGCCTaGAAGCCGGGCGGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKAVPRA*KPGGRA
Trigger: GGCCCTGCCGCCCGGCTTCAAGGCCCGCGGAACAGC...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS TCA 90 bp ATCAGGTCTCTTGCCATCCGCGGTGGCGGACACTGGTCACAGATATaGGTCTATCCACGAACGTCAACCCTATCCAAAAAGAATCCCGCG +
Preference number: 5 (lower is better)
Translates to: IRSLAIRGGGHWSQI*VYPRTSTLSKKNPA
Trigger: CGCGGGATTCTTTTTGGATAGGGTTGACGTTCGTGGATAGACTCATATCTGTGACCAGTGTCCGCCACCGCGGATGGCAAGAGACCTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361121.6
ENST00000379151.9
ENST00000611650.1
CDS-3UTR CAA 90 bp TCCTGCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTTGCATCTTTGGAAGTCCGATCAGGTCTCTaGCCATCCGCGGTGGCGGAC +
Preference number: 5 (lower is better)
Translates to: SCQMERRLDSIRPFASLEVRSGL*PSAVAD
Trigger: GTCCGCCACCGCGGATGGCAAGAGACCTGATCGGAC...TTCCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR CAA 90 bp AATTTCTTAATCACCATTCTGAACCCTTGTCAGATTGGGCTATGGATGAATATTGCTGTTCCGCGGGCCTaGAAGCCGGGCGGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: NFLITILNPCQIGLWMNIAVPRA*KPGGRA
Trigger: GGCCCTGCCGCCCGGCTTCAAGGCCCGCGGAACAGC...AATATTCATCCATAGCCCAATCTGACAAGGGTTCAGAATGGTGATTAAGAAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR CAA 90 bp AGGCATTCAGTCTTAAATGGCCCCAAGTCAGCCAGGGACAAGGAACTACAATCTTGCAGTGAGCCGAGATaGCGCCATTACACTCCAGTC +
Preference number: 5 (lower is better)
Translates to: RHSVLNGPKSARDKELQSCSEPR*RHYTPV
Trigger: GACTGGAGTGTAATGGCGCAATCTCGGCTCACTGCA...AGATTGTAGTTCCTTGTCCCTGGCTGACTTGGGGCCATTTAAGACTGAATGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CAA 90 bp TTAAATGGCCCCAAGTCAGCCAGGGACAAGGAACTACAATCTGACTATTCCTCTAGGCAGGAGAATCACTaGAACCTGGAAGGCGGAGGG +
Preference number: 5 (lower is better)
Translates to: LNGPKSARDKELQSDYSSRQENH*NLEGGG
Trigger: CCCTCCGCCTTCCAGGTTCAAGTGATTCTCCTGCCT...AGAGGAATAGTCAGATTGTAGTTCCTTGTCCCTGGCTGACTTGGGGCCATTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CAA 90 bp AGGCATTCAGTCTTAAATGGCCCCAAGTCAGCCAGGGACAAGGAACTACAATCTGCTGTCTGTTTCCTGTaGTCCTGGATCATCTCTGCC +
Preference number: 5 (lower is better)
Translates to: RHSVLNGPKSARDKELQSAVCFL*SWIISA
Trigger: GGCAGAGATGATCCAGGACAACAGGAAACAGACAGC...AGATTGTAGTTCCTTGTCCCTGGCTGACTTGGGGCCATTTAAGACTGAATGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CAA 90 bp AATTTCTTAATCACCATTCTGAACCCTTGTCAGATTGGGCTATGGATGAATATTGTCCGATCAGGTCTCTaGCCATCCGCGGTGGCGGAC +
Preference number: 5 (lower is better)
Translates to: NFLITILNPCQIGLWMNIVRSGL*PSAVAD
Trigger: GTCCGCCACCGCGGATGGCAAGAGACCTGATCGGAC...AATATTCATCCATAGCCCAATCTGACAAGGGTTCAGAATGGTGATTAAGAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR CAA 90 bp TTAAATGGCCCCAAGTCAGCCAGGGACAAGGAACTACAATCTGACTATTCCTCTTTACATACAGGGTGTTaGCAGAGCAAGGGCCTAAGA +
Preference number: 5 (lower is better)
Translates to: LNGPKSARDKELQSDYSSLHTGC*QSKGLR
Trigger: TCTTAGGCCCTTGCTCTGCAAACACCCTGTATGTAA...AGAGGAATAGTCAGATTGTAGTTCCTTGTCCCTGGCTGACTTGGGGCCATTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CAA 90 bp ACCAAAGAACTAAAGCTTCAGGGCATTTGCATATGTGATCAGTCACTTTTCACATTGGCCAGGGTAGCCTaGAACTCCTGGCCTCAAGCA +
Preference number: 5 (lower is better)
Translates to: TKELKLQGICICDQSLFTLARVA*NSWPQA
Trigger: TGCTTGAGGCCAGGAGTTCAAGGCTACCCTGGCCAA...TGTGAAAAGTGACTGATCACATATGCAAATGCCCTGAAGCTTTAGTTCTTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CAA 90 bp AGGCATTCAGTCTTAAATGGCCCCAAGTCAGCCAGGGACAAGGAACTACAATCTAATGGCAGTAGAATCTaGATCACTGTAGCAACTGGC +
Preference number: 5 (lower is better)
Translates to: RHSVLNGPKSARDKELQSNGSRI*ITVATG
Trigger: GCCAGTTGCTACAGTGATCAAGATTCTACTGCCATT...AGATTGTAGTTCCTTGTCCCTGGCTGACTTGGGGCCATTTAAGACTGAATGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CAA 90 bp TCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAAGTATTGCTGGTGCTGACCAGTGCTCCCTTTTaGTGCTCCCTGCCTTTTCAA +
Preference number: 5 (lower is better)
Translates to: SLKRSDNPFFKRQVLLVLTSAPF*CSLPFQ
Trigger: TTGAAAAGGCAGGGAGCACAAAAAGGGAGCACTGGT...CAGCACCAGCAATACTTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CAA 90 bp GAATGGCCTGGGATAATTGTTAAAAGTGAAGATGCTCTGATTCTAACCCCAAAGTTGCCCAGGTTGGTCTaGAACTCCTGGCCCTCAAGT +
Preference number: 5 (lower is better)
Translates to: EWPGIIVKSEDALILTPKLPRLV*NSWPSS
Trigger: ACTTGAGGGCCAGGAGTTCAAGACCAACCTGGGCAA...CTTTGGGGTTAGAATCAGAGCATCTTCACTTTTAACAATTATCCCAGGCCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS TCA 90 bp GGTATCAGTCAGTTAGGGCAGCGTGCAGCTCATATTAAGGCTAAATaGGAATGTATTATCATCACGAAGCCAAACCACGCCAAAGCTCGT +
Preference number: 5 (lower is better)
Translates to: GISQLGQRAAHIKAK*ECIIITKPNHAKAR
Trigger: ACGAGCTTTGGCGTGGTTTGGCTTCGTGATGATAATACATTCTCATTTAGCCTTAATATGAGCTGCACGCTGCCCTAACTGACTGATACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611650.1
CDS CCA 90 bp ATCTCTGCCCTTGTCACTTTTCTGTGTAGATTTAATGAAACCAGGTaGCAATGCAGGACCTATTATGGGCCTTGGAGGAGAATCATCCTG +
Preference number: 5 (lower is better)
Translates to: ISALVTFLCRFNETR*QCRTYYGPWRRIIL
Trigger: CAGGATGATTCTCCTCCAAGGCCCATAATAGGTCCTGCATTGCCACCTGGTTTCATTAAATCTACACAGAAAAGTGACAAGGGCAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357537.4
ENST00000361121.6
ENST00000379151.9
ENST00000497558.5
CDS-3UTR CAA 90 bp TCCTGCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTTGCATCTTTGGAAGACCTATTATGGGCCTaGGAGGAGAATCATCCTGCT +
Preference number: 5 (lower is better)
Translates to: SCQMERRLDSIRPFASLEDLLWA*EENHPA
Trigger: AGCAGGATGATTCTCCTCCAAGGCCCATAATAGGTC...TTCCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR CAA 90 bp TTAAATGGCCCCAAGTCAGCCAGGGACAAGGAACTACAATCTGACTATTCCTCTGGATCATCTCTGCCCTaGTCACTTTTCTGTGTAGAT +
Preference number: 5 (lower is better)
Translates to: LNGPKSARDKELQSDYSSGSSLP*SLFCVD
Trigger: ATCTACACAGAAAAGTGACAAGGGCAGAGATGATCC...AGAGGAATAGTCAGATTGTAGTTCCTTGTCCCTGGCTGACTTGGGGCCATTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CAA 90 bp AAGGTAGTAACTCCTGGAAGCAATAGGCGGAAAGCAGAGGTTTCTCTCCTTCATGGATCATCTCTGCCCTaGTCACTTTTCTGTGTAGAT +
Preference number: 5 (lower is better)
Translates to: KVVTPGSNRRKAEVSLLHGSSLP*SLFCVD
Trigger: ATCTACACAGAAAAGTGACAAGGGCAGAGATGATCC...ATGAAGGAGAGAAACCTCTGCTTTCCGCCTATTGCTTCCAGGAGTTACTACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR CAA 90 bp AAGGTAGTAACTCCTGGAAGCAATAGGCGGAAAGCAGAGGTTTCTCTCCTTCATGAGTATCTGTCCAGATaGATCGATCTCCAGATGTGT +
Preference number: 5 (lower is better)
Translates to: KVVTPGSNRRKAEVSLLHEYLSR*IDLQMC
Trigger: ACACATCTGGAGATCGATCAATCTGGACAGATACTC...ATGAAGGAGAGAAACCTCTGCTTTCCGCCTATTGCTTCCAGGAGTTACTACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR CAA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAAGCTGTCTGTTTCCTGTaGTCCTGGATCATCTCTGCC +
Preference number: 5 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKAVCFL*SWIISA
Trigger: GGCAGAGATGATCCAGGACAACAGGAAACAGACAGC...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR CAA 90 bp AATATTCTTGTATTGGGATTAGTCTCTCTGTGGGGCAAAACAACCTCTGAAACTGCTGTCTGTTTCCTGTaGTCCTGGATCATCTCTGCC +
Preference number: 5 (lower is better)
Translates to: NILVLGLVSLWGKTTSETAVCFL*SWIISA
Trigger: GGCAGAGATGATCCAGGACAACAGGAAACAGACAGC...AGTTTCAGAGGTTGTTTTGCCCCACAGAGAGACTAATCCCAATACAAGAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR CAA 90 bp AGGCATTCAGTCTTAAATGGCCCCAAGTCAGCCAGGGACAAGGAACTACAATCTTCAAACCGATTAACCTaGAGATCTTTATCACGGTCA +
Preference number: 5 (lower is better)
Translates to: RHSVLNGPKSARDKELQSSNRLT*RSLSRS
Trigger: TGACCGTGATAAAGATCTCAAGGTTAATCGGTTTGA...AGATTGTAGTTCCTTGTCCCTGGCTGACTTGGGGCCATTTAAGACTGAATGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CAA 90 bp AATTTCTTAATCACCATTCTGAACCCTTGTCAGATTGGGCTATGGATGAATATTCAGCTCACTGCTGCCTaGAATTCCTGGGCTCAAGGG +
Preference number: 5 (lower is better)
Translates to: NFLITILNPCQIGLWMNIQLTAA*NSWAQG
Trigger: CCCTTGAGCCCAGGAATTCAAGGCAGCAGTGAGCTG...AATATTCATCCATAGCCCAATCTGACAAGGGTTCAGAATGGTGATTAAGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR CAA 90 bp AGATCATCTATAGCCCACCAGTGCTCCCTTTTTGTGCTCCCTGCCTTTTCAATGTTGGTCACTTTCAATTaGGGAGTTAGAGAGACCAAA +
Preference number: 5 (lower is better)
Translates to: RSSIAHQCSLFVLPAFSMLVTFN*GVRETK
Trigger: TTTGGTCTCTCTAACTCCCAAATTGAAAGTGACCAA...CATTGAAAAGGCAGGGAGCACAAAAAGGGAGCACTGGTGGGCTATAGATGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CAA 90 bp AGATCATCTATAGCCCACCAGTGCTCCCTTTTTGTGCTCCCTGCCTTTTCAATGACAAAGGAGAGGGGATaGTTTATAGGAACACATGTA +
Preference number: 5 (lower is better)
Translates to: RSSIAHQCSLFVLPAFSMTKERG*FIGTHV
Trigger: TACATGTGTTCCTATAAACAATCCCCTCTCCTTTGT...CATTGAAAAGGCAGGGAGCACAAAAAGGGAGCACTGGTGGGCTATAGATGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CAA 90 bp TCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAAGTATTGCTGGTGCTGTGCTGGTGCTGGTGTTaGTTGCTATGCAAAGTAAAG +
Preference number: 5 (lower is better)
Translates to: SLKRSDNPFFKRQVLLVLCWCWC*LLCKVK
Trigger: CTTTACTTTGCATAGCAACAAACACCAGCACCAGCA...CAGCACCAGCAATACTTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CAA 90 bp GAATGGCCTGGGATAATTGTTAAAAGTGAAGATGCTCTGATTCTAACCCCAAAGTCCTGTCTTGGCCTCTaGAAGTGCTGGGATTACAGA +
Preference number: 5 (lower is better)
Translates to: EWPGIIVKSEDALILTPKSCLGL*KCWDYR
Trigger: TCTGTAATCCCAGCACTTCAAGAGGCCAAGACAGGA...CTTTGGGGTTAGAATCAGAGCATCTTCACTTTTAACAATTATCCCAGGCCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CAA 90 bp TCTCCTGCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTTGCATCTTTGGTTTTCCTCTGTTTTCTaGCAGTTGGACCACTGTCAT +
Preference number: 5 (lower is better)
Translates to: SPARWKGDLIQLGLLHLWFSSVF*QLDHCH
Trigger: ATGACAGTGGTCCAACTGCAAGAAAACAGAGGAAAA...CCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR CAA 90 bp ACCAAAGAACTAAAGCTTCAGGGCATTTGCATATGTGATCAGTCACTTTTCACAGACCTATTATGGGCCTaGGAGGAGAATCATCCTGCT +
Preference number: 5 (lower is better)
Translates to: TKELKLQGICICDQSLFTDLLWA*EENHPA
Trigger: AGCAGGATGATTCTCCTCCAAGGCCCATAATAGGTC...TGTGAAAAGTGACTGATCACATATGCAAATGCCCTGAAGCTTTAGTTCTTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CAA 90 bp AAGGTAGTAACTCCTGGAAGCAATAGGCGGAAAGCAGAGGTTTCTCTCCTTCATTCTGAAATAGAAGACTaGGCTGTCGATGTTAATTGG +
Preference number: 5 (lower is better)
Translates to: KVVTPGSNRRKAEVSLLHSEIED*AVDVNW
Trigger: CCAATTAACATCGACAGCCAAGTCTTCTATTTCAGA...ATGAAGGAGAGAAACCTCTGCTTTCCGCCTATTGCTTCCAGGAGTTACTACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR CAA 90 bp AGGCATTCAGTCTTAAATGGCCCCAAGTCAGCCAGGGACAAGGAACTACAATCTATTCAATGCTTAGCTTaGATGTTGCAAAGCATCTCT +
Preference number: 5 (lower is better)
Translates to: RHSVLNGPKSARDKELQSIQCLA*MLQSIS
Trigger: AGAGATGCTTTGCAACATCAAAGCTAAGCATTGAAT...AGATTGTAGTTCCTTGTCCCTGGCTGACTTGGGGCCATTTAAGACTGAATGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CAA 90 bp TCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAAGTATTGCTGGTGCTGTATCATATAGCCTGTTaGGCCAACATTACCCCATCA +
Preference number: 5 (lower is better)
Translates to: SLKRSDNPFFKRQVLLVLYHIAC*ANITPS
Trigger: TGATGGGGTAATGTTGGCCAAACAGGCTATATGATA...CAGCACCAGCAATACTTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CAA 90 bp GGCCTTGAAGGATGGGGAGAAGTTTGTCAGTTATGTTTAGGAATGCAACCAGAGAGTATTGGGCTGTGTTaGTCAGATGCAATAACAGAA +
Preference number: 5 (lower is better)
Translates to: GLEGWGEVCQLCLGMQPESIGLC*SDAITE
Trigger: TTCTGTTATTGCATCTGACAAACACAGCCCAATACT...CTCTGGTTGCATTCCTAAACATAACTGACAAACTTCTCCCCATCCTTCAAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611650.1
CDS-3UTR CAA 90 bp GGCCTTGAAGGATGGGGAGAAGTTTGTCAGTTATGTTTAGGAATGCAACCAGAGAGGATGGGGAGAAGTTaGTCAGTTATGTTTAGGAAT +
Preference number: 5 (lower is better)
Translates to: GLEGWGEVCQLCLGMQPERMGRS*SVMFRN
Trigger: ATTCCTAAACATAACTGACAAACTTCTCCCCATCCT...CTCTGGTTGCATTCCTAAACATAACTGACAAACTTCTCCCCATCCTTCAAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611650.1
CDS-3UTR CAA 90 bp AATTTCTTAATCACCATTCTGAACCCTTGTCAGATTGGGCTATGGATGAATATTGCTGTCTGTTTCCTGTaGTCCTGGATCATCTCTGCC +
Preference number: 5 (lower is better)
Translates to: NFLITILNPCQIGLWMNIAVCFL*SWIISA
Trigger: GGCAGAGATGATCCAGGACAACAGGAAACAGACAGC...AATATTCATCCATAGCCCAATCTGACAAGGGTTCAGAATGGTGATTAAGAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR CAA 90 bp TCTCCTGCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTTGCATCTTTGGTCAAACCGATTAACCTaGAGATCTTTATCACGGTCA +
Preference number: 5 (lower is better)
Translates to: SPARWKGDLIQLGLLHLWSNRLT*RSLSRS
Trigger: TGACCGTGATAAAGATCTCAAGGTTAATCGGTTTGA...CCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR CAA 90 bp TCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAAGTATTGCTGGTGCTGTGCTTAGCTTTGATGTaGCAAAGCATCTCTTTTGGT +
Preference number: 5 (lower is better)
Translates to: SLKRSDNPFFKRQVLLVLCLALM*QSISFG
Trigger: ACCAAAAGAGATGCTTTGCAACATCAAAGCTAAGCA...CAGCACCAGCAATACTTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CAA 90 bp AATGCTTTTAGGCATTCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAAGGTAGAGACCATCCTTaGCAGATCATCTATAGCCCA +
Preference number: 5 (lower is better)
Translates to: NAFRHSLKRSDNPFFKRQGRDHP*QIIYSP
Trigger: TGGGCTATAGATGATCTGCAAAGGATGGTCTCTACC...TTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGAATGCCTAAAAGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CAA 90 bp TCCTGCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTTGCATCTTTGGAAATTCAATTAGGCCTTTaGCATCTTTGGAAGTGGGGA +
Preference number: 5 (lower is better)
Translates to: SCQMERRLDSIRPFASLEIQLGL*HLWKWG
Trigger: TCCCCACTTCCAAAGATGCAAAAGGCCTAATTGAAT...TTCCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR CAA 90 bp TCTCCTGCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTTGCATCTTTGGTTTTCCATTAAAAATTaGTGTCTTGGCCAGGCATGG +
Preference number: 5 (lower is better)
Translates to: SPARWKGDLIQLGLLHLWFSIKN*CLGQAW
Trigger: CCATGCCTGGCCAAGACACAAATTTTTAATGGAAAA...CCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS TCA 90 bp CTCTGTTTTCTTGCAGTTGGACCACTGTCATCTTCTTCAGATTCTTaGTTTCCTTCTTCGTACAAAGAACTACTGTCTTCATCGCTGTCT +
Preference number: 5 (lower is better)
Translates to: LCFLAVGPLSSSSDS*FPSSYKELLSSSLS
Trigger: AGACAGCGATGAAGACAGTAGTTCTTTGTACGAAGAAGGAAATCAAGAATCTGAAGAAGATGACAGTGGTCCAACTGCAAGAAAACAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361121.6
ENST00000379151.9
ENST00000497558.5
CDS-3UTR CAA 90 bp AATTTCTTAATCACCATTCTGAACCCTTGTCAGATTGGGCTATGGATGAATATTGACCTATTATGGGCCTaGGAGGAGAATCATCCTGCT +
Preference number: 5 (lower is better)
Translates to: NFLITILNPCQIGLWMNIDLLWA*EENHPA
Trigger: AGCAGGATGATTCTCCTCCAAGGCCCATAATAGGTC...AATATTCATCCATAGCCCAATCTGACAAGGGTTCAGAATGGTGATTAAGAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR CAA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAAGGATCATCTCTGCCCTaGTCACTTTTCTGTGTAGAT +
Preference number: 5 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKGSSLP*SLFCVD
Trigger: ATCTACACAGAAAAGTGACAAGGGCAGAGATGATCC...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR CAA 90 bp ACCAAAGAACTAAAGCTTCAGGGCATTTGCATATGTGATCAGTCACTTTTCACAGAGTATCTGTCCAGATaGATCGATCTCCAGATGTGT +
Preference number: 5 (lower is better)
Translates to: TKELKLQGICICDQSLFTEYLSR*IDLQMC
Trigger: ACACATCTGGAGATCGATCAATCTGGACAGATACTC...TGTGAAAAGTGACTGATCACATATGCAAATGCCCTGAAGCTTTAGTTCTTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CAA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAAGAGTATCTGTCCAGATaGATCGATCTCCAGATGTGT +
Preference number: 5 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKEYLSR*IDLQMC
Trigger: ACACATCTGGAGATCGATCAATCTGGACAGATACTC...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR CAA 90 bp ACCAAAGAACTAAAGCTTCAGGGCATTTGCATATGTGATCAGTCACTTTTCACAAACCTGGCAAGCGAGTaGGAGTTAAAGTTGTTGTTG +
Preference number: 5 (lower is better)
Translates to: TKELKLQGICICDQSLFTNLASE*ELKLLL
Trigger: CAACAACAACTTTAACTCCAACTCGCTTGCCAGGTT...TGTGAAAAGTGACTGATCACATATGCAAATGCCCTGAAGCTTTAGTTCTTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CAA 90 bp TCTCCTGCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTTGCATCTTTGGAAAATTATCCTCAGGTaGGCACAAAAGAGCATTATC +
Preference number: 5 (lower is better)
Translates to: SPARWKGDLIQLGLLHLWKIILR*AQKSII
Trigger: GATAATGCTCTTTTGTGCCAACCTGAGGATAATTTT...CCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR CAA 90 bp TCCTGCCAGATGGAAAGGAGACTTGATTCAATTAGGCCTTTTGCATCTTTGGAACAATGCTCCTTTAGTTaGCTATGGTTTACACTGATG +
Preference number: 5 (lower is better)
Translates to: SCQMERRLDSIRPFASLEQCSFS*LWFTLM
Trigger: CATCAGTGTAAACCATAGCAAACTAAAGGAGCATTG...TTCCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS CCA 90 bp AAACTCTGTCGTTACATTATAGTTAACTGGTCCTTTTGCAGGCATTaGTCCAATAATATCCTCATCTTCACTGCTGTCTGTTTCCTGTTG +
Preference number: 5 (lower is better)
Translates to: KLCRYIIVNWSFCRH*SNNILIFTAVCFLL
Trigger: CAACAGGAAACAGACAGCAGTGAAGATGAGGATATTATTGGACCAATGCCTGCAAAAGGACCAGTTAACTATAATGTAACGACAGAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357537.4
ENST00000361121.6
ENST00000379151.9
ENST00000497558.5
CDS-3UTR CAA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAATTTTCCTCTGTTTTCTaGCAGTTGGACCACTGTCAT +
Preference number: 5 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKFSSVF*QLDHCH
Trigger: ATGACAGTGGTCCAACTGCAAGAAAACAGAGGAAAA...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR CAA 90 bp GAATGGCCTGGGATAATTGTTAAAAGTGAAGATGCTCTGATTCTAACCCCAAAGAAAAACATATTGCCTTaGCCGTGTGAAAATCTGGTG +
Preference number: 5 (lower is better)
Translates to: EWPGIIVKSEDALILTPKKNILP*PCENLV
Trigger: CACCAGATTTTCACACGGCAAAGGCAATATGTTTTT...CTTTGGGGTTAGAATCAGAGCATCTTCACTTTTAACAATTATCCCAGGCCATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CAA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAACTCAGAAAGCTTTGGTaGAGATCAGAGATTGAGTCT +
Preference number: 5 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKLRKLW*RSEIES
Trigger: AGACTCAATCTCTGATCTCAACCAAAGCTTTCTGAG...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR CAA 90 bp AATATTCTTGTATTGGGATTAGTCTCTCTGTGGGGCAAAACAACCTCTGAAACTCTCAGAAAGCTTTGGTaGAGATCAGAGATTGAGTCT +
Preference number: 5 (lower is better)
Translates to: NILVLGLVSLWGKTTSETLRKLW*RSEIES
Trigger: AGACTCAATCTCTGATCTCAACCAAAGCTTTCTGAG...AGTTTCAGAGGTTGTTTTGCCCCACAGAGAGACTAATCCCAATACAAGAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR CAA 90 bp AACCATCTGGCCAACTCCAATGTCATGTTTATAACTTGGTTAAGAAGTATTCTCCCTACAATGATCTGGTaGGCCGGAATAAACCTTTAC +
Preference number: 5 (lower is better)
Translates to: NHLANSNVMFITWLRSILPTMIW*AGINLY
Trigger: GTAAAGGTTTATTCCGGCCAACCAGATCATTGTAGG...GAGAATACTTCTTAACCAAGTTATAAACATGACATTGGAGTTGGCCAGATGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CAA 90 bp AATTTCTTAATCACCATTCTGAACCCTTGTCAGATTGGGCTATGGATGAATATTGAGTATCTGTCCAGATaGATCGATCTCCAGATGTGT +
Preference number: 5 (lower is better)
Translates to: NFLITILNPCQIGLWMNIEYLSR*IDLQMC
Trigger: ACACATCTGGAGATCGATCAATCTGGACAGATACTC...AATATTCATCCATAGCCCAATCTGACAAGGGTTCAGAATGGTGATTAAGAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR CAA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAATCAAACCGATTAACCTaGAGATCTTTATCACGGTCA +
Preference number: 5 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKSNRLT*RSLSRS
Trigger: TGACCGTGATAAAGATCTCAAGGTTAATCGGTTTGA...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR CAA 90 bp CTTCAACTTTTCTTCATTGCACAGGGAAATCCCCCTGAGGTAAGAATAAGAAAAAAAAACATATTGCCTTaGCCGTGTGAAAATCTGGTG +
Preference number: 5 (lower is better)
Translates to: LQLFFIAQGNPPEVRIRKKNILP*PCENLV
Trigger: CACCAGATTTTCACACGGCAAAGGCAATATGTTTTT...TTTTCTTATTCTTACCTCAGGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAG
39% GC, longest homopolymer 9 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR CAA 90 bp AATATTCTTGTATTGGGATTAGTCTCTCTGTGGGGCAAAACAACCTCTGAAACTAAAAACATATTGCCTTaGCCGTGTGAAAATCTGGTG +
Preference number: 5 (lower is better)
Translates to: NILVLGLVSLWGKTTSETKNILP*PCENLV
Trigger: CACCAGATTTTCACACGGCAAAGGCAATATGTTTTT...AGTTTCAGAGGTTGTTTTGCCCCACAGAGAGACTAATCCCAATACAAGAATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR CAA 90 bp AATGCTTTTAGGCATTCACTCAAGAGAAGTGACAATCCATTCTTCAAGAGGCAATGCAAAGCATCTCTTTaGGTCACTTTCAATTTGGGA +
Preference number: 5 (lower is better)
Translates to: NAFRHSLKRSDNPFFKRQCKASL*VTFNLG
Trigger: TCCCAAATTGAAAGTGACCAAAAGAGATGCTTTGCA...TTGCCTCTTGAAGAATGGATTGTCACTTCTCTTGAGTGAATGCCTAAAAGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357537.4
CDS-3UTR CAA 90 bp AATATTCTTGTATTGGGATTAGTCTCTCTGTGGGGCAAAACAACCTCTGAAACTAGATGGAAAGGAGACTaGATTCAATTAGGCCTTTTG +
Preference number: 5 (lower is better)
Translates to: NILVLGLVSLWGKTTSETRWKGD*IQLGLL
Trigger: CAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCT...AGTTTCAGAGGTTGTTTTGCCCCACAGAGAGACTAATCCCAATACAAGAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000497558.5
CDS-3UTR CAA 90 bp AATTTCTTAATCACCATTCTGAACCCTTGTCAGATTGGGCTATGGATGAATATTCTCAGAAAGCTTTGGTaGAGATCAGAGATTGAGTCT +
Preference number: 5 (lower is better)
Translates to: NFLITILNPCQIGLWMNILRKLW*RSEIES
Trigger: AGACTCAATCTCTGATCTCAACCAAAGCTTTCTGAG...AATATTCATCCATAGCCCAATCTGACAAGGGTTCAGAATGGTGATTAAGAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS-3UTR CAA 90 bp AATTTCTTAATCACCATTCTGAACCCTTGTCAGATTGGGCTATGGATGAATATTAAAAACATATTGCCTTaGCCGTGTGAAAATCTGGTG +
Preference number: 5 (lower is better)
Translates to: NFLITILNPCQIGLWMNIKNILP*PCENLV
Trigger: CACCAGATTTTCACACGGCAAAGGCAATATGTTTTT...AATATTCATCCATAGCCCAATCTGACAAGGGTTCAGAATGGTGATTAAGAAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000379151.9
CDS TCA 90 bp CGATTAACCTTGAGATCTTTATCACGGTCAAATGGTATTCTCTCTTaGGGCTTATTTTTGTCTTCAGCAGCCTTACTCTTTAACTTTTTA +
Preference number: 5 (lower is better)
Translates to: RLTLRSLSRSNGILS*GLFLSSAALLFNFL
Trigger: TAAAAAGTTAAAGAGTAAGGCTGCTGAAGACAAAAATAAGCCTCAAGAGAGAATACCATTTGACCGTGATAAAGATCTCAAGGTTAATCG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357537.4
ENST00000361121.6
ENST00000379151.9
ENST00000497558.5
CDS CCA 72 bp CGAGCAGGGCCCGGCCAGGGAGTGGGTAGATGGGCCTaGTGGGCAGCGGAGACGCCGCCGCTTACCAGGGCT +
Preference number: 6 (lower is better)
Translates to: RAGPGQGVGRWA*WAAETPPLTRA
Trigger: AGCCCTGGTAAGCGGCGGCGTCTCCGCTGCCCACCAGGCCCATCTACCCACTCCCTGGCCGGGCCCTGCTCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611650.1
CDS TCA 72 bp GGTCCCGCTCTTCGTCCTCCGCTGTTCCGCGGGCCTTaGAGCCGGGCGGCAGGGCCGGTCCGATCAGGTCTC +
Preference number: 6 (lower is better)
Translates to: GPALRPPLFRGP*SRAAGPVRSGL
Trigger: GAGACCTGATCGGACCGGCCCTGCCGCCCGGCTTCAAGGCCCGCGGAACAGCGGAGGACGAAGAGCGGGACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361121.6
ENST00000379151.9
ENST00000479068.1
ENST00000497558.5
ENST00000611650.1
CDS CAA 72 bp GGGTCCCGCTCTTCGTCCTCCGCTGTTCCGCGGGCCTaGAAGCCGGGCGGCAGGGCCGGTCCGATCAGGTCT +
Preference number: 6 (lower is better)
Translates to: GSRSSSSAVPRA*KPGGRAGPIRS
Trigger: AGACCTGATCGGACCGGCCCTGCCGCCCGGCTTCAAGGCCCGCGGAACAGCGGAGGACGAAGAGCGGGACCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361121.6
ENST00000379151.9
ENST00000479068.1
ENST00000497558.5
ENST00000611650.1
CDS CAA 90 bp CCAGGGCTCGGGTCCCGCTCTTCGTCCTCCGCTGTTCCGCGGGCCTaGAAGCCGGGCGGCAGGGCCGGTCCGATCAGGTCTCTTGCCATC +
Preference number: 6 (lower is better)
Translates to: PGLGSRSSSSAVPRA*KPGGRAGPIRSLAI
Trigger: GATGGCAAGAGACCTGATCGGACCGGCCCTGCCGCCCGGCTTCAAGGCCCGCGGAACAGCGGAGGACGAAGAGCGGGACCCGAGCCCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361121.6
ENST00000611650.1
CDS CCA 72 bp CCGACTTTCTTCAGCGAGCAGGGCCCGGCCAGGGAGTaGGTAGATGGGCCTGGTGGGCAGCGGAGACGCCGC +
Preference number: 6 (lower is better)
Translates to: PTFFSEQGPARE*VDGPGGQRRRR
Trigger: GCGGCGTCTCCGCTGCCCACCAGGCCCATCTACCCACTCCCTGGCCGGGCCCTGCTCGCTGAAGAAAGTCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611650.1
CDS CAA 90 bp ACAGGGCTCGGGTCCCGCTCTTCGTCCTCCGCTGTTCCGCGGGCCTaGAAGCCGGGCGGCAGGGCCGGTCCGATCAGGTCTCTTGCCATC +
Preference number: 6 (lower is better)
Translates to: TGLGSRSSSSAVPRA*KPGGRAGPIRSLAI
Trigger: GATGGCAAGAGACCTGATCGGACCGGCCCTGCCGCCCGGCTTCAAGGCCCGCGGAACAGCGGAGGACGAAGAGCGGGACCCGAGCCCTGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379151.9
ENST00000497558.5
CDS CAA 90 bp TCAGGGCTCGGGTCCCGCTCTTCGTCCTCCGCTGTTCCGCGGGCCTaGAAGCCGGGCGGCAGGGCCGGTCCGATCAGGTCTCTTGCCATC +
Preference number: 6 (lower is better)
Translates to: SGLGSRSSSSAVPRA*KPGGRAGPIRSLAI
Trigger: GATGGCAAGAGACCTGATCGGACCGGCCCTGCCGCCCGGCTTCAAGGCCCGCGGAACAGCGGAGGACGAAGAGCGGGACCCGAGCCCTGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479068.1
CDS GCA 72 bp GAAGCCGGGCGGCAGGGCCGGTCCGATCAGGTCTCTTaGCATCCGCGGTGGCGGACACTGGTCACAGATATG +
Preference number: 6 (lower is better)
Translates to: EAGRQGRSDQVS*HPRWRTLVTDM
Trigger: CATATCTGTGACCAGTGTCCGCCACCGCGGATGGCAAGAGACCTGATCGGACCGGCCCTGCCGCCCGGCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361121.6
ENST00000379151.9
ENST00000479068.1
ENST00000497558.5
ENST00000611650.1
CDS CCA 72 bp CAGGGCCGGTCCGATCAGGTCTCTTGCCATCCGCGGTaGCGGACACTGGTCACAGATATGAGTCTATCCACG +
Preference number: 6 (lower is better)
Translates to: QGRSDQVSCHPR*RTLVTDMSLST
Trigger: CGTGGATAGACTCATATCTGTGACCAGTGTCCGCCACCGCGGATGGCAAGAGACCTGATCGGACCGGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361121.6
ENST00000379151.9
ENST00000611650.1
CDS TCA 72 bp CTTGCCATCCGCGGTGGCGGACACTGGTCACAGATATaGGTCTATCCACGAACGTCAACCCTATCCAAAAAG +
Preference number: 6 (lower is better)
Translates to: LAIRGGGHWSQI*VYPRTSTLSKK
Trigger: CTTTTTGGATAGGGTTGACGTTCGTGGATAGACTCATATCTGTGACCAGTGTCCGCCACCGCGGATGGCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361121.6
ENST00000379151.9
ENST00000611650.1
CDS TCA 72 bp CAGTTAGGGCAGCGTGCAGCTCATATTAAGGCTAAATaGGAATGTATTATCATCACGAAGCCAAACCACGCC +
Preference number: 6 (lower is better)
Translates to: QLGQRAAHIKAK*ECIIITKPNHA
Trigger: GGCGTGGTTTGGCTTCGTGATGATAATACATTCTCATTTAGCCTTAATATGAGCTGCACGCTGCCCTAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611650.1
CDS CAA 72 bp CTTTCCTTTCCCTATCAGCTGGAGTATCTGTCCAGATaGATCGATCTCCAGATGTGTCATCAGCTCTTCTCT +
Preference number: 6 (lower is better)
Translates to: LSFPYQLEYLSR*IDLQMCHQLFS
Trigger: AGAGAAGAGCTGATGACACATCTGGAGATCGATCAATCTGGACAGATACTCCAGCTGATAGGGAAAGGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357537.4
ENST00000361121.6
ENST00000379151.9
ENST00000497558.5
CDS TCA 72 bp TTTCCTTTCCCTATCAGCTGGAGTATCTGTCCAGATTaGTCGATCTCCAGATGTGTCATCAGCTCTTCTCTT +
Preference number: 6 (lower is better)
Translates to: FPFPISWSICPD*SISRCVISSSL
Trigger: AAGAGAAGAGCTGATGACACATCTGGAGATCGATCAATCTGGACAGATACTCCAGCTGATAGGGAAAGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357537.4
ENST00000361121.6
ENST00000379151.9
ENST00000497558.5
CDS TCA 72 bp CTTGCAGTTGGACCACTGTCATCTTCTTCAGATTCTTaGTTTCCTTCTTCGTACAAAGAACTACTGTCTTCA +
Preference number: 6 (lower is better)
Translates to: LAVGPLSSSSDS*FPSSYKELLSS
Trigger: TGAAGACAGTAGTTCTTTGTACGAAGAAGGAAATCAAGAATCTGAAGAAGATGACAGTGGTCCAACTGCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361121.6
ENST00000379151.9
ENST00000497558.5