RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPA33 (Homo sapiens)

Ensembl gene IDs: ENSG00000143167

Ensembl transcript IDs: ENST00000367868.4, ENST00000527955.5, ENST00000534512.1, ENST00000632571.1

Found 241 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGCTCCTGCCAACTACGAGGGAAGTGGAGGCTGCAGCCTGGTCTTaGGTGAGGGCCAGGCCCGCACCAGGTGTCACAGCCAGGAGGGGT +
Preference number: 1 (lower is better)
Translates to: ELLPTTREVEAAAWS*VRARPAPGVTARRG
Trigger: ACCCCTCCTGGCTGTGACACCTGGTGCGGGCCTGGCCCTCACTCAAGACCAGGCTGCAGCCTCCACTTCCCTCGTAGTTGGCAGGAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR GCA 90 bp GCTGTGCTTCCAGGAGCTCCTGCCAACTACGAGGGAAGTGGAGGCTaGAGCCTGGTCTTGAGTGAGGGCCAGGCCCGCACCAGGTGTCAC +
Preference number: 1 (lower is better)
Translates to: AVLPGAPANYEGSGG*SLVLSEGQARTRCH
Trigger: GTGACACCTGGTGCGGGCCTGGCCCTCACTCAAGACCAGGCTGCAGCCTCCACTTCCCTCGTAGTTGGCAGGAGCTCCTGGAAGCACAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR TCA 90 bp CCCGCACCAGGTGTCACAGCCAGGAGGGGTTACTTCACAGGACAGTaGGGTCAGCAGGATCAGCACAGGGACCCCCTTACCAGGCCAGCC +
Preference number: 1 (lower is better)
Translates to: PAPGVTARRGYFTGQ*GQQDQHRDPLTRPA
Trigger: GGCTGGCCTGGTAAGGGGGTCCCTGTGCTGATCCTGCTGACCTCACTGTCCTGTGAAGTAACCCCTCCTGGCTGTGACACCTGGTGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR GCA 90 bp CCTCCCTGGAGAGTTCTGAGTGGGAGCGCCCCATGCTCAGCGCTGTaGTTCCAGGAGCTCCTGCCAACTACGAGGGAAGTGGAGGCTGCA +
Preference number: 1 (lower is better)
Translates to: PPWRVLSGSAPCSAL*FQELLPTTREVEAA
Trigger: TGCAGCCTCCACTTCCCTCGTAGTTGGCAGGAGCTCCTGGAAGCACAGCGCTGAGCATGGGGCGCTCCCACTCAGAACTCTCCAGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR GCA 90 bp AGGCTGGCATCGCCTCCCTGGAGAGTTCTGAGTGGGAGCGCCCCATaGTCAGCGCTGTGCTTCCAGGAGCTCCTGCCAACTACGAGGGAA +
Preference number: 1 (lower is better)
Translates to: RLASPPWRVLSGSAP*SALCFQELLPTTRE
Trigger: TTCCCTCGTAGTTGGCAGGAGCTCCTGGAAGCACAGCGCTGAGCATGGGGCGCTCCCACTCAGAACTCTCCAGGGAGGCGATGCCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR TCA 90 bp CATGAGGCCCAGGCCCTGCCCCAAGGAGCTGGCGCTCTAATACAGTaGGAGCACTCGCTCAGAAGACTGTGCCTTGTGGCCCATGATTGG +
Preference number: 1 (lower is better)
Translates to: HEAQALPQGAGALIQ*EHSLRRLCLVAHDW
Trigger: CCAATCATGGGCCACAAGGCACAGTCTTCTGAGCGAGTGCTCTCACTGTATTAGAGCGCCAGCTCCTTGGGGCAGGGCCTGGGCCTCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR GCA 90 bp CAGGCAGAGATGGAAAGTGTGTGGGCAAAAGCTCCCCAGGGCCTGTaGAGCAGGAGTGGGAGGTGGCCTTCCCAGGAGGGTTTGGAACAT +
Preference number: 1 (lower is better)
Translates to: QAEMESVWAKAPQGL*SRSGRWPSQEGLEH
Trigger: ATGTTCCAAACCCTCCTGGGAAGGCCACCTCCCACTCCTGCTGCACAGGCCCTGGGGAGCTTTTGCCCACACACTTTCCATCTCTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR GCA 90 bp TGGAGGGTGGCACGAGGACCAACAGGCGGACACGTGACTTGGTGTTaGCCTCCAGGTCTGACATCAGCGAGACAGAACACTCGTAGGTGC +
Preference number: 1 (lower is better)
Translates to: WRVARGPTGGHVTWC*PPGLTSARQNTRRC
Trigger: GCACCTACGAGTGTTCTGTCTCGCTGATGTCAGACCTGGAGGGCAACACCAAGTCACGTGTCCGCCTGTTGGTCCTCGTGCCACCCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
3UTR CCA 90 bp AGGGCCTGTGCAGCAGGAGTGGGAGGTGGCCTTCCCAGGAGGGTTTaGAACATACTGGCAGCTACGGGAAGTGAGGTTGGAAAGGGAGTG +
Preference number: 1 (lower is better)
Translates to: RACAAGVGGGLPRRV*NILAATGSEVGKGV
Trigger: CACTCCCTTTCCAACCTCACTTCCCGTAGCTGCCAGTATGTTCCAAACCCTCCTGGGAAGGCCACCTCCCACTCCTGCTGCACAGGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR CCA 90 bp CTGGTTTGGAGGGTGGCACGAGGACCAACAGGCGGACACGTGACTTaGTGTTGCCCTCCAGGTCTGACATCAGCGAGACAGAACACTCGT +
Preference number: 1 (lower is better)
Translates to: LVWRVARGPTGGHVT*CCPPGLTSARQNTR
Trigger: ACGAGTGTTCTGTCTCGCTGATGTCAGACCTGGAGGGCAACACCAAGTCACGTGTCCGCCTGTTGGTCCTCGTGCCACCCTCCAAACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
3UTR TCA 90 bp GCTGAGGTATCGGGATGCAGGAACAACCAGGAACCCCATGTGGGTTaGGGAGACATGCCAATTATTCTGGCCTGGAGAGGAATTACCAGG +
Preference number: 1 (lower is better)
Translates to: AEVSGCRNNQEPHVG*GDMPIILAWRGITR
Trigger: CCTGGTAATTCCTCTCCAGGCCAGAATAATTGGCATGTCTCCTCAACCCACATGGGGTTCCTGGTTGTTCCTGCATCCCGATACCTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR CCA 90 bp CCAGGGCTGAGGTATCGGGATGCAGGAACAACCAGGAACCCCATGTaGGTTGAGGAGACATGCCAATTATTCTGGCCTGGAGAGGAATTA +
Preference number: 1 (lower is better)
Translates to: PGLRYRDAGTTRNPM*VEETCQLFWPGEEL
Trigger: TAATTCCTCTCCAGGCCAGAATAATTGGCATGTCTCCTCAACCCACATGGGGTTCCTGGTTGTTCCTGCATCCCGATACCTCAGCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR GCA 90 bp GGGAAGGCACAACCAATCAAAGCAGTTTCCCCAATTAAGCTTAAGTaGCCACTAGGATGGGCGCCAGCTACTAGGGCTTCAGGGAAAGCA +
Preference number: 1 (lower is better)
Translates to: GKAQPIKAVSPIKLK*PLGWAPATRASGKA
Trigger: TGCTTTCCCTGAAGCCCTAGTAGCTGGCGCCCATCCTAGTGGGCACTTAAGCTTAATTGGGGAAACTGCTTTGATTGGTTGTGCCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR CCA 90 bp GAGCACTCGCTCAGAAGACTGTGCCTTGTGGCCCATGATTGGACGTaGGACAGAGTAACAGGATTGTTTCCACGTATGTGGACAATTAGG +
Preference number: 1 (lower is better)
Translates to: EHSLRRLCLVAHDWT*DRVTGLFPRMWTIR
Trigger: CCTAATTGTCCACATACGTGGAAACAATCCTGTTACTCTGTCCCACGTCCAATCATGGGCCACAAGGCACAGTCTTCTGAGCGAGTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR CCA 90 bp CCAATCAAAGCAGTTTCCCCAATTAAGCTTAAGTGCCCACTAGGATaGGCGCCAGCTACTAGGGCTTCAGGGAAAGCAAAAGCCATGAGG +
Preference number: 1 (lower is better)
Translates to: PIKAVSPIKLKCPLG*APATRASGKAKAMR
Trigger: CCTCATGGCTTTTGCTTTCCCTGAAGCCCTAGTAGCTGGCGCCCATCCTAGTGGGCACTTAAGCTTAATTGGGGAAACTGCTTTGATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR TCA 90 bp AATACAGTGAGAGCACTCGCTCAGAAGACTGTGCCTTGTGGCCCATaGTTGGACGTGGGACAGAGTAACAGGATTGTTTCCACGTATGTG +
Preference number: 1 (lower is better)
Translates to: NTVRALAQKTVPCGP*LDVGQSNRIVSTYV
Trigger: CACATACGTGGAAACAATCCTGTTACTCTGTCCCACGTCCAATCATGGGCCACAAGGCACAGTCTTCTGAGCGAGTGCTCTCACTGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR CAA 90 bp GGAGCTCCTGCCAACTACGAGGGAAGTGGAGGCTGCAGCCTGGTCTaGAGTGAGGGCCAGGCCCGCACCAGGTGTCACAGCCAGGAGGGG +
Preference number: 2 (lower is better)
Translates to: GAPANYEGSGGCSLV*SEGQARTRCHSQEG
Trigger: CCCCTCCTGGCTGTGACACCTGGTGCGGGCCTGGCCCTCACTCAAGACCAGGCTGCAGCCTCCACTTCCCTCGTAGTTGGCAGGAGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR-3UTR TCA 90 bp GCCCCAAGGAGCTGGCGCTCTAATACAGTGAGAGCACTCGCTCAGAAGACTGTGGCTGCAGCCTGGTCTTaGGTGAGGGCCAGGCCCGCA +
Preference number: 2 (lower is better)
Translates to: APRSWRSNTVRALAQKTVAAAWS*VRARPA
Trigger: TGCGGGCCTGGCCCTCACTCAAGACCAGGCTGCAGC...CACAGTCTTCTGAGCGAGTGCTCTCACTGTATTAGAGCGCCAGCTCCTTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR-3UTR TCA 90 bp CGGGATGCAGGAACAACCAGGAACCCCATGTGGGTTGAGGAGACATGCCAATTACAGCCTGGTCTTGAGTaGGGGCCAGGCCCGCACCAG +
Preference number: 2 (lower is better)
Translates to: RDAGTTRNPMWVEETCQLQPGLE*GPGPHQ
Trigger: CTGGTGCGGGCCTGGCCCTCACTCAAGACCAGGCTG...TAATTGGCATGTCTCCTCAACCCACATGGGGTTCCTGGTTGTTCCTGCATCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR-3UTR GCA 90 bp GCCCCAAGGAGCTGGCGCTCTAATACAGTGAGAGCACTCGCTCAGAAGACTGTGAGTGGGAGCGCCCCATaGTCAGCGCTGTGCTTCCAG +
Preference number: 2 (lower is better)
Translates to: APRSWRSNTVRALAQKTVSGSAP*SALCFQ
Trigger: CTGGAAGCACAGCGCTGAGCATGGGGCGCTCCCACT...CACAGTCTTCTGAGCGAGTGCTCTCACTGTATTAGAGCGCCAGCTCCTTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR CAA 90 bp TCTGGTTTGGAGGGTGGCACGAGGACCAACAGGCGGACACGTGACTaGGTGTTGCCCTCCAGGTCTGACATCAGCGAGACAGAACACTCG +
Preference number: 2 (lower is better)
Translates to: SGLEGGTRTNRRTRD*VLPSRSDISETEHS
Trigger: CGAGTGTTCTGTCTCGCTGATGTCAGACCTGGAGGGCAACACCAAGTCACGTGTCCGCCTGTTGGTCCTCGTGCCACCCTCCAAACCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
3UTR-3UTR TCA 90 bp AAGAAAGATGTGTGGAGTGCAAACCCTCCACCTGGTGCCCCTCCAGGTGCTGGGCAGGAAGCGGGAGAATaGACCCCTAACCCTTCCTCC +
Preference number: 2 (lower is better)
Translates to: KKDVWSANPPPGAPPGAGQEAGE*TPNPSS
Trigger: GGAGGAAGGGTTAGGGGTTCATTCTCCCGCTTCCTG...CCCAGCACCTGGAGGGGCACCAGGTGGAGGGTTTGCACTCCACACATCTTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR-3UTR GCA 90 bp CCTCGATGCCGCATTCTGGTTTGGAGGGTGGCACGAGGACCAACAGGCGGACACCAGAACACTCGTAGGTaGCGTTGTCAGCCATGGTCA +
Preference number: 2 (lower is better)
Translates to: PRCRILVWRVARGPTGGHQNTRR*RCQPWS
Trigger: TGACCATGGCTGACAACGGCACCTACGAGTGTTCTG...GTGTCCGCCTGTTGGTCCTCGTGCCACCCTCCAAACCAGAATGCGGCATCGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
3UTR-3UTR CCA 90 bp CGCCCCATGCTCAGCGCTGTGCTTCCAGGAGCTCCTGCCAACTACGAGGGAAGTCATCAATGTCTGGGATaGAGGGACAGGAGAACAGGG +
Preference number: 2 (lower is better)
Translates to: RPMLSAVLPGAPANYEGSHQCLG*RDRRTG
Trigger: CCCTGTTCTCCTGTCCCTCCATCCCAGACATTGATG...ACTTCCCTCGTAGTTGGCAGGAGCTCCTGGAAGCACAGCGCTGAGCATGGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR-3UTR GCA 90 bp GGCCCTGCCCCAAGGAGCTGGCGCTCTAATACAGTGAGAGCACTCGCTCAGAAGGAAAGATGTGTGGAGTaGAAACCCTCCACCTGGTGC +
Preference number: 2 (lower is better)
Translates to: GPAPRSWRSNTVRALAQKERCVE*KPSTWC
Trigger: GCACCAGGTGGAGGGTTTGCACTCCACACATCTTTC...CTTCTGAGCGAGTGCTCTCACTGTATTAGAGCGCCAGCTCCTTGGGGCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR-3UTR CCA 90 bp CTCAGAAGACTGTGCCTTGTGGCCCATGATTGGACGTGGGACAGAGTAACAGGATGCAAACCCTCCACCTaGTGCCCCTCCAGGTGCTGG +
Preference number: 2 (lower is better)
Translates to: LRRLCLVAHDWTWDRVTGCKPST*CPSRCW
Trigger: CCAGCACCTGGAGGGGCACCAGGTGGAGGGTTTGCA...TCCTGTTACTCTGTCCCACGTCCAATCATGGGCCACAAGGCACAGTCTTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR-3UTR GCA 90 bp CCCTCGATGCCGCATTCTGGTTTGGAGGGTGGCACGAGGACCAACAGGCGGACAATGGAGGCATCGGACTaGTCAGCATTGTTGGATATG +
Preference number: 2 (lower is better)
Translates to: PSMPHSGLEGGTRTNRRTMEASD*SALLDM
Trigger: CATATCCAACAATGCTGAGCAGTCCGATGCCTCCAT...TGTCCGCCTGTTGGTCCTCGTGCCACCCTCCAAACCAGAATGCGGCATCGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
3UTR-3UTR GCA 90 bp GCAGTTTCCCCAATTAAGCTTAAGTGCCCACTAGGATGGGCGCCAGCTACTAGGGCTTCCAGGAGCTCCTaGCAACTACGAGGGAAGTGG +
Preference number: 2 (lower is better)
Translates to: AVSPIKLKCPLGWAPATRASRSS*QLRGKW
Trigger: CCACTTCCCTCGTAGTTGGCAGGAGCTCCTGGAAGC...CCTAGTAGCTGGCGCCCATCCTAGTGGGCACTTAAGCTTAATTGGGGAAACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR-3UTR TCA 90 bp TGGACGTGGGACAGAGTAACAGGATTGTTTCCACGTATGTGGACAATTAGGATATGCTGGGCACACAGGTaGGCAGGACAGCCCCCACCC +
Preference number: 2 (lower is better)
Translates to: WTWDRVTGLFPRMWTIRICWAHR*AGQPPP
Trigger: GGGTGGGGGCTGTCCTGCTCACCTGTGTGCCCAGCA...TATCCTAATTGTCCACATACGTGGAAACAATCCTGTTACTCTGTCCCACGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR-3UTR TCA 90 bp TATGGTCTCTCCCTCGATGCCGCATTCTGGTTTGGAGGGTGGCACGAGGACCAATTGAAAACGGCCAGATaGCCACCCTTTCCGTATGAG +
Preference number: 2 (lower is better)
Translates to: YGLSLDAAFWFGGWHEDQLKTAR*PPFPYE
Trigger: CTCATACGGAAAGGGTGGTCATCTGGCCGTTTTCAA...TTGGTCCTCGTGCCACCCTCCAAACCAGAATGCGGCATCGAGGGAGAGACCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534512.1
3UTR-3UTR GCA 90 bp TGTGGGTTGAGGAGACATGCCAATTATTCTGGCCTGGAGAGGAATTACCAGGACCCATGCTCAGCGCTGTaGTTCCAGGAGCTCCTGCCA +
Preference number: 2 (lower is better)
Translates to: CGLRRHANYSGLERNYQDPCSAL*FQELLP
Trigger: TGGCAGGAGCTCCTGGAAGCACAGCGCTGAGCATGG...GTCCTGGTAATTCCTCTCCAGGCCAGAATAATTGGCATGTCTCCTCAACCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR-3UTR CCA 90 bp CGGGATGCAGGAACAACCAGGAACCCCATGTGGGTTGAGGAGACATGCCAATTACCTGCCCCAAGGAGCTaGCGCTCTAATACAGTGAGA +
Preference number: 2 (lower is better)
Translates to: RDAGTTRNPMWVEETCQLPAPRS*RSNTVR
Trigger: TCTCACTGTATTAGAGCGCCAGCTCCTTGGGGCAGG...TAATTGGCATGTCTCCTCAACCCACATGGGGTTCCTGGTTGTTCCTGCATCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR-3UTR GCA 90 bp TGTGGGTTGAGGAGACATGCCAATTATTCTGGCCTGGAGAGGAATTACCAGGACGAGGGAAGTGGAGGCTaGAGCCTGGTCTTGAGTGAG +
Preference number: 2 (lower is better)
Translates to: CGLRRHANYSGLERNYQDEGSGG*SLVLSE
Trigger: CTCACTCAAGACCAGGCTGCAGCCTCCACTTCCCTC...GTCCTGGTAATTCCTCTCCAGGCCAGAATAATTGGCATGTCTCCTCAACCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR-3UTR CCA 90 bp CTCAGAAGACTGTGCCTTGTGGCCCATGATTGGACGTGGGACAGAGTAACAGGAGTCCCCATCAATGTCTaGGATGGAGGGACAGGAGAA +
Preference number: 2 (lower is better)
Translates to: LRRLCLVAHDWTWDRVTGVPINV*DGGTGE
Trigger: TTCTCCTGTCCCTCCATCCCAGACATTGATGGGGAC...TCCTGTTACTCTGTCCCACGTCCAATCATGGGCCACAAGGCACAGTCTTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR-3UTR CCA 90 bp GCCCTAACGCTGCCTGAGCTCTCAAGAGTAGAAGAAATGCTCGACAAACAGAAGAAGTGCCCACTAGGATaGGCGCCAGCTACTAGGGCT +
Preference number: 2 (lower is better)
Translates to: ALTLPELSRVEEMLDKQKKCPLG*APATRA
Trigger: AGCCCTAGTAGCTGGCGCCCATCCTAGTGGGCACTT...CTTCTGTTTGTCGAGCATTTCTTCTACTCTTGAGAGCTCAGGCAGCGTTAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR-3UTR CCA 90 bp ACCCCATGTGGGTTGAGGAGACATGCCAATTATTCTGGCCTGGAGAGGAATTACGAGATGGAAAGTGTGTaGGCAAAAGCTCCCCAGGGC +
Preference number: 2 (lower is better)
Translates to: TPCGLRRHANYSGLERNYEMESV*AKAPQG
Trigger: GCCCTGGGGAGCTTTTGCCCACACACTTTCCATCTC...GTAATTCCTCTCCAGGCCAGAATAATTGGCATGTCTCCTCAACCCACATGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR-3UTR CCA 90 bp GCAGTTTCCCCAATTAAGCTTAAGTGCCCACTAGGATGGGCGCCAGCTACTAGGCTTGTGGCCCATGATTaGACGTGGGACAGAGTAACA +
Preference number: 2 (lower is better)
Translates to: AVSPIKLKCPLGWAPATRLVAHD*TWDRVT
Trigger: TGTTACTCTGTCCCACGTCCAATCATGGGCCACAAG...CCTAGTAGCTGGCGCCCATCCTAGTGGGCACTTAAGCTTAATTGGGGAAACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR-3UTR CCA 90 bp GCCCTAACGCTGCCTGAGCTCTCAAGAGTAGAAGAAATGCTCGACAAACAGAAGGAAGACTGTGCCTTGTaGCCCATGATTGGACGTGGG +
Preference number: 2 (lower is better)
Translates to: ALTLPELSRVEEMLDKQKEDCAL*PMIGRG
Trigger: CCCACGTCCAATCATGGGCCACAAGGCACAGTCTTC...CTTCTGTTTGTCGAGCATTTCTTCTACTCTTGAGAGCTCAGGCAGCGTTAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR-3UTR TCA 90 bp TGTGGGTTGAGGAGACATGCCAATTATTCTGGCCTGGAGAGGAATTACCAGGACTACTTCACAGGACAGTaGGGTCAGCAGGATCAGCAC +
Preference number: 2 (lower is better)
Translates to: CGLRRHANYSGLERNYQDYFTGQ*GQQDQH
Trigger: GTGCTGATCCTGCTGACCTCACTGTCCTGTGAAGTA...GTCCTGGTAATTCCTCTCCAGGCCAGAATAATTGGCATGTCTCCTCAACCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR-3UTR TCA 90 bp TGTGGGTTGAGGAGACATGCCAATTATTCTGGCCTGGAGAGGAATTACCAGGACGGCGCTCTAATACAGTaGGAGCACTCGCTCAGAAGA +
Preference number: 2 (lower is better)
Translates to: CGLRRHANYSGLERNYQDGALIQ*EHSLRR
Trigger: TCTTCTGAGCGAGTGCTCTCACTGTATTAGAGCGCC...GTCCTGGTAATTCCTCTCCAGGCCAGAATAATTGGCATGTCTCCTCAACCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR-3UTR TCA 90 bp GCCGTTGTCAGCCATGGTCAGCTGATCAATGGTGATGGAGGCATCGGACTGCTCGATGTAGTTTTTGTTTaGAAACGGCCAGATGACCAC +
Preference number: 2 (lower is better)
Translates to: AVVSHGQLINGDGGIGLLDVVFV*KRPDDH
Trigger: GTGGTCATCTGGCCGTTTTCAAACAAAAACTACATC...GAGCAGTCCGATGCCTCCATCACCATTGATCAGCTGACCATGGCTGACAACGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534512.1
3UTR-3UTR TCA 90 bp TCTGGTTTGGAGGGTGGCACGAGGACCAACAGGCGGACACGTGACTTGGTGTTGCATTGTTGGATATGCTaGCGCGATTCTTATAAAGCT +
Preference number: 2 (lower is better)
Translates to: SGLEGGTRTNRRTRDLVLHCWIC*RDSYKA
Trigger: AGCTTTATAAGAATCGCGTCAGCATATCCAACAATG...CAACACCAAGTCACGTGTCCGCCTGTTGGTCCTCGTGCCACCCTCCAAACCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
3UTR CAA 90 bp CTGTGCCTTGTGGCCCATGATTGGACGTGGGACAGAGTAACAGGATaGTTTCCACGTATGTGGACAATTAGGATAGGGTTAGAGAAATCC +
Preference number: 2 (lower is better)
Translates to: LCLVAHDWTWDRVTG*FPRMWTIRIGLEKS
Trigger: GGATTTCTCTAACCCTATCCTAATTGTCCACATACGTGGAAACAATCCTGTTACTCTGTCCCACGTCCAATCATGGGCCACAAGGCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR-3UTR CCA 90 bp TGGACGTGGGACAGAGTAACAGGATTGTTTCCACGTATGTGGACAATTAGGATACTTCCCAGGAGGGTTTaGAACATACTGGCAGCTACG +
Preference number: 2 (lower is better)
Translates to: WTWDRVTGLFPRMWTIRILPRRV*NILAAT
Trigger: CGTAGCTGCCAGTATGTTCCAAACCCTCCTGGGAAG...TATCCTAATTGTCCACATACGTGGAAACAATCCTGTTACTCTGTCCCACGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR-3UTR CCA 90 bp AAGGCACAACCAATCAAAGCAGTTTCCCCAATTAAGCTTAAGTGCCCACTAGGACCTTGTGATTTGAGATaGGCCTGGAGGGACAGGTAC +
Preference number: 2 (lower is better)
Translates to: KAQPIKAVSPIKLKCPLGPCDLR*AWRDRY
Trigger: GTACCTGTCCCTCCAGGCCCATCTCAAATCACAAGG...TCCTAGTGGGCACTTAAGCTTAATTGGGGAAACTGCTTTGATTGGTTGTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR-3UTR TCA 90 bp AAGGCACAACCAATCAAAGCAGTTTCCCCAATTAAGCTTAAGTGCCCACTAGGAGAAATCCTTGTGATTTaGGATGGGCCTGGAGGGACA +
Preference number: 2 (lower is better)
Translates to: KAQPIKAVSPIKLKCPLGEILVI*DGPGGT
Trigger: TGTCCCTCCAGGCCCATCTCAAATCACAAGGATTTC...TCCTAGTGGGCACTTAAGCTTAATTGGGGAAACTGCTTTGATTGGTTGTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR-3UTR CCA 90 bp CGGGATGCAGGAACAACCAGGAACCCCATGTGGGTTGAGGAGACATGCCAATTATTGTTTCCACGTATGTaGACAATTAGGATAGGGTTA +
Preference number: 2 (lower is better)
Translates to: RDAGTTRNPMWVEETCQLLFPRM*TIRIGL
Trigger: TAACCCTATCCTAATTGTCCACATACGTGGAAACAA...TAATTGGCATGTCTCCTCAACCCACATGGGGTTCCTGGTTGTTCCTGCATCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR CAA 90 bp ACTTTAAATCAATTCGTGTTTAACTCACTGAATGAATACGTGGGTTaGGGTGGGAATCATCCCTGTGTCTACGATCATCTCAAGGAGACC +
Preference number: 2 (lower is better)
Translates to: TLNQFVFNSLNEYVG*GGNHPCVYDHLKET
Trigger: GGTCTCCTTGAGATGATCGTAGACACAGGGATGATTCCCACCCAAACCCACGTATTCATTCAGTGAGTTAAACACGAATTGATTTAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR CAA 90 bp AATTACCAGGACACAAGAACTCAGACCATCTGCAAGCAAGCTCCCTaGTGTGTGTTCACTTTAAATCAATTCGTGTTTAACTCACTGAAT +
Preference number: 2 (lower is better)
Translates to: NYQDTRTQTICKQAP*CVFTLNQFVFNSLN
Trigger: ATTCAGTGAGTTAAACACGAATTGATTTAAAGTGAACACACACAAGGGAGCTTGCTTGCAGATGGTCTGAGTTCTTGTGTCCTGGTAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR TCA 72 bp CCAACTACGAGGGAAGTGGAGGCTGCAGCCTGGTCTTaGGTGAGGGCCAGGCCCGCACCAGGTGTCACAGCC +
Preference number: 3 (lower is better)
Translates to: PTTREVEAAAWS*VRARPAPGVTA
Trigger: GGCTGTGACACCTGGTGCGGGCCTGGCCCTCACTCAAGACCAGGCTGCAGCCTCCACTTCCCTCGTAGTTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR GCA 72 bp TCGCCTCCCTGGAGAGTTCTGAGTGGGAGCGCCCCATaGTCAGCGCTGTGCTTCCAGGAGCTCCTGCCAACT +
Preference number: 3 (lower is better)
Translates to: SPPWRVLSGSAP*SALCFQELLPT
Trigger: AGTTGGCAGGAGCTCCTGGAAGCACAGCGCTGAGCATGGGGCGCTCCCACTCAGAACTCTCCAGGGAGGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR TCA 72 bp CAGGCCCTGCCCCAAGGAGCTGGCGCTCTAATACAGTaGGAGCACTCGCTCAGAAGACTGTGCCTTGTGGCC +
Preference number: 3 (lower is better)
Translates to: QALPQGAGALIQ*EHSLRRLCLVA
Trigger: GGCCACAAGGCACAGTCTTCTGAGCGAGTGCTCTCACTGTATTAGAGCGCCAGCTCCTTGGGGCAGGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR GCA 72 bp AGAGTTCTGAGTGGGAGCGCCCCATGCTCAGCGCTGTaGTTCCAGGAGCTCCTGCCAACTACGAGGGAAGTG +
Preference number: 3 (lower is better)
Translates to: RVLSGSAPCSAL*FQELLPTTREV
Trigger: CACTTCCCTCGTAGTTGGCAGGAGCTCCTGGAAGCACAGCGCTGAGCATGGGGCGCTCCCACTCAGAACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR CCA 72 bp AGGGTGGCACGAGGACCAACAGGCGGACACGTGACTTaGTGTTGCCCTCCAGGTCTGACATCAGCGAGACAG +
Preference number: 3 (lower is better)
Translates to: RVARGPTGGHVT*CCPPGLTSARQ
Trigger: CTGTCTCGCTGATGTCAGACCTGGAGGGCAACACCAAGTCACGTGTCCGCCTGTTGGTCCTCGTGCCACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
3UTR-3UTR CAA 90 bp GGAACAACCAGGAACCCCATGTGGGTTGAGGAGACATGCCAATTATTCTGGCCTGGCTGCAGCCTGGTCTaGAGTGAGGGCCAGGCCCGC +
Preference number: 3 (lower is better)
Translates to: GTTRNPMWVEETCQLFWPGCSLV*SEGQAR
Trigger: GCGGGCCTGGCCCTCACTCAAGACCAGGCTGCAGCC...AGGCCAGAATAATTGGCATGTCTCCTCAACCCACATGGGGTTCCTGGTTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR GCA 72 bp GCACGAGGACCAACAGGCGGACACGTGACTTGGTGTTaGCCTCCAGGTCTGACATCAGCGAGACAGAACACT +
Preference number: 3 (lower is better)
Translates to: ARGPTGGHVTWC*PPGLTSARQNT
Trigger: AGTGTTCTGTCTCGCTGATGTCAGACCTGGAGGGCAACACCAAGTCACGTGTCCGCCTGTTGGTCCTCGTGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
3UTR CCA 72 bp CAATTATGGTCTCTCCCTCGATGCCGCATTCTGGTTTaGAGGGTGGCACGAGGACCAACAGGCGGACACGTG +
Preference number: 3 (lower is better)
Translates to: QLWSLPRCRILV*RVARGPTGGHV
Trigger: CACGTGTCCGCCTGTTGGTCCTCGTGCCACCCTCCAAACCAGAATGCGGCATCGAGGGAGAGACCATAATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
3UTR TCA 72 bp TCGGGATGCAGGAACAACCAGGAACCCCATGTGGGTTaGGGAGACATGCCAATTATTCTGGCCTGGAGAGGA +
Preference number: 3 (lower is better)
Translates to: SGCRNNQEPHVG*GDMPIILAWRG
Trigger: TCCTCTCCAGGCCAGAATAATTGGCATGTCTCCTCAACCCACATGGGGTTCCTGGTTGTTCCTGCATCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR TCA 72 bp AGAGCACTCGCTCAGAAGACTGTGCCTTGTGGCCCATaGTTGGACGTGGGACAGAGTAACAGGATTGTTTCC +
Preference number: 3 (lower is better)
Translates to: RALAQKTVPCGP*LDVGQSNRIVS
Trigger: GGAAACAATCCTGTTACTCTGTCCCACGTCCAATCATGGGCCACAAGGCACAGTCTTCTGAGCGAGTGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR TCA 72 bp AGGTGCCGTTGTCAGCCATGGTCAGCTGATCAATGGTaGTGGAGGCATCGGACTGCTCAGCATTGTTGGATA +
Preference number: 3 (lower is better)
Translates to: RCRCQPWSADQW*WRHRTAQHCWI
Trigger: TATCCAACAATGCTGAGCAGTCCGATGCCTCCATCACCATTGATCAGCTGACCATGGCTGACAACGGCACCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
3UTR CCA 72 bp CACTCGCTCAGAAGACTGTGCCTTGTGGCCCATGATTaGACGTGGGACAGAGTAACAGGATTGTTTCCACGT +
Preference number: 3 (lower is better)
Translates to: HSLRRLCLVAHD*TWDRVTGLFPR
Trigger: ACGTGGAAACAATCCTGTTACTCTGTCCCACGTCCAATCATGGGCCACAAGGCACAGTCTTCTGAGCGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR CCA 72 bp AGGTATCGGGATGCAGGAACAACCAGGAACCCCATGTaGGTTGAGGAGACATGCCAATTATTCTGGCCTGGA +
Preference number: 3 (lower is better)
Translates to: RYRDAGTTRNPM*VEETCQLFWPG
Trigger: TCCAGGCCAGAATAATTGGCATGTCTCCTCAACCCACATGGGGTTCCTGGTTGTTCCTGCATCCCGATACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR-3UTR CAA 90 bp ACATCAGCGAGACAGAACACTCGTAGGTGCCGTTGTCAGCCATGGTCAGCTGATGACTGCTCAGCATTGTaGGATATGCTGACGCGATTC +
Preference number: 3 (lower is better)
Translates to: TSARQNTRRCRCQPWSADDCSAL*DMLTRF
Trigger: GAATCGCGTCAGCATATCCAACAATGCTGAGCAGTC...ATCAGCTGACCATGGCTGACAACGGCACCTACGAGTGTTCTGTCTCGCTGATGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
3UTR CCA 72 bp CTCAGAAGACTGTGCCTTGTGGCCCATGATTGGACGTaGGACAGAGTAACAGGATTGTTTCCACGTATGTGG +
Preference number: 3 (lower is better)
Translates to: LRRLCLVAHDWT*DRVTGLFPRMW
Trigger: CCACATACGTGGAAACAATCCTGTTACTCTGTCCCACGTCCAATCATGGGCCACAAGGCACAGTCTTCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR CCA 72 bp GCAGTTTCCCCAATTAAGCTTAAGTGCCCACTAGGATaGGCGCCAGCTACTAGGGCTTCAGGGAAAGCAAAA +
Preference number: 3 (lower is better)
Translates to: AVSPIKLKCPLG*APATRASGKAK
Trigger: TTTTGCTTTCCCTGAAGCCCTAGTAGCTGGCGCCCATCCTAGTGGGCACTTAAGCTTAATTGGGGAAACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR-3UTR CAA 90 bp GATTGGACGTGGGACAGAGTAACAGGATTGTTTCCACGTATGTGGACAATTAGGCCTTCCCAGGAGGGTTaGGAACATACTGGCAGCTAC +
Preference number: 3 (lower is better)
Translates to: DWTWDRVTGLFPRMWTIRPSQEG*EHTGSY
Trigger: GTAGCTGCCAGTATGTTCCAAACCCTCCTGGGAAGG...CCTAATTGTCCACATACGTGGAAACAATCCTGTTACTCTGTCCCACGTCCAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR-3UTR CAA 90 bp GCCCTAACGCTGCCTGAGCTCTCAAGAGTAGAAGAAATGCTCGACAAACAGAAGGGAACCCCATGTGGGTaGAGGAGACATGCCAATTAT +
Preference number: 3 (lower is better)
Translates to: ALTLPELSRVEEMLDKQKGTPCG*RRHANY
Trigger: ATAATTGGCATGTCTCCTCAACCCACATGGGGTTCC...CTTCTGTTTGTCGAGCATTTCTTCTACTCTTGAGAGCTCAGGCAGCGTTAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR GCA 72 bp CAACCAATCAAAGCAGTTTCCCCAATTAAGCTTAAGTaGCCACTAGGATGGGCGCCAGCTACTAGGGCTTCA +
Preference number: 3 (lower is better)
Translates to: QPIKAVSPIKLK*PLGWAPATRAS
Trigger: TGAAGCCCTAGTAGCTGGCGCCCATCCTAGTGGGCACTTAAGCTTAATTGGGGAAACTGCTTTGATTGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR-3UTR CAA 90 bp TGTGGGTTGAGGAGACATGCCAATTATTCTGGCCTGGAGAGGAATTACCAGGACAATGAATACGTGGGTTaGGGTGGGAATCATCCCTGT +
Preference number: 3 (lower is better)
Translates to: CGLRRHANYSGLERNYQDNEYVG*GGNHPC
Trigger: ACAGGGATGATTCCCACCCAAACCCACGTATTCATT...GTCCTGGTAATTCCTCTCCAGGCCAGAATAATTGGCATGTCTCCTCAACCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR GCA 72 bp GAGAGGAATTACCAGGACACAAGAACTCAGACCATCTaGAAGCAAGCTCCCTTGTGTGTGTTCACTTTAAAT +
Preference number: 3 (lower is better)
Translates to: ERNYQDTRTQTI*KQAPLCVFTLN
Trigger: ATTTAAAGTGAACACACACAAGGGAGCTTGCTTGCAGATGGTCTGAGTTCTTGTGTCCTGGTAATTCCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR TCA 90 bp AAGGCTGGCATCGCCTCCCTGGAGAGTTCTGAGTGGGAGCGCCCCATGCTCAGCCAACAGGCGGACACGTaGCTTGGTGTTGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: KAGIASLESSEWERPMLSQQADT*LGVALQ
Trigger: CTGGAGGGCAACACCAAGTCACGTGTCCGCCTGTTG...GCTGAGCATGGGGCGCTCCCACTCAGAACTCTCCAGGGAGGCGATGCCAGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CCA 90 bp AGTGAGGGCCAGGCCCGCACCAGGTGTCACAGCCAGGAGGGGTTACTTCACAGGTGTCACTGGTCGAGGTaGTCCGGGGATTCACGCCCA +
Preference number: 4 (lower is better)
Translates to: SEGQARTRCHSQEGLLHRCHWSR*SGDSRP
Trigger: TGGGCGTGAATCCCCGGACCACCTCGACCAGTGACA...CCTGTGAAGTAACCCCTCCTGGCTGTGACACCTGGTGCGGGCCTGGCCCTCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CCA 90 bp GGCCCTGCCCCAAGGAGCTGGCGCTCTAATACAGTGAGAGCACTCGCTCAGAAGTGCAAACCCTCCACCTaGTGCCCCTCCAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GPAPRSWRSNTVRALAQKCKPST*CPSRCW
Trigger: CCAGCACCTGGAGGGGCACCAGGTGGAGGGTTTGCA...CTTCTGAGCGAGTGCTCTCACTGTATTAGAGCGCCAGCTCCTTGGGGCAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CCA 90 bp CGATGCCGCATTCTGGTTTGGAGGGTGGCACGAGGACCAACAGGCGGACACGTGTGCCGCATTCTGGTTTaGAGGGTGGCACGAGGACCA +
Preference number: 4 (lower is better)
Translates to: RCRILVWRVARGPTGGHVCRILV*RVARGP
Trigger: TGGTCCTCGTGCCACCCTCCAAACCAGAATGCGGCA...CACGTGTCCGCCTGTTGGTCCTCGTGCCACCCTCCAAACCAGAATGCGGCATCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
CDS-3UTR CCA 90 bp AGGGTGGCACGAGGACCAACAGGCGGACACGTGACTTGGTGTTGCCCTCCAGGTCTCGATGCCGCATTCTaGTTTGGAGGGTGGCACGAG +
Preference number: 4 (lower is better)
Translates to: RVARGPTGGHVTWCCPPGLDAAF*FGGWHE
Trigger: CTCGTGCCACCCTCCAAACCAGAATGCGGCATCGAG...ACCTGGAGGGCAACACCAAGTCACGTGTCCGCCTGTTGGTCCTCGTGCCACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
CDS-3UTR CCA 90 bp AAGGCTGGCATCGCCTCCCTGGAGAGTTCTGAGTGGGAGCGCCCCATGCTCAGCGAAGACTGTGCCTTGTaGCCCATGATTGGACGTGGG +
Preference number: 4 (lower is better)
Translates to: KAGIASLESSEWERPMLSEDCAL*PMIGRG
Trigger: CCCACGTCCAATCATGGGCCACAAGGCACAGTCTTC...GCTGAGCATGGGGCGCTCCCACTCAGAACTCTCCAGGGAGGCGATGCCAGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CCA 90 bp CGCCCCATGCTCAGCGCTGTGCTTCCAGGAGCTCCTGCCAACTACGAGGGAAGTAAGTGCCCACTAGGATaGGCGCCAGCTACTAGGGCT +
Preference number: 4 (lower is better)
Translates to: RPMLSAVLPGAPANYEGSKCPLG*APATRA
Trigger: AGCCCTAGTAGCTGGCGCCCATCCTAGTGGGCACTT...ACTTCCCTCGTAGTTGGCAGGAGCTCCTGGAAGCACAGCGCTGAGCATGGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR CAA 72 bp GAGGGTGGCACGAGGACCAACAGGCGGACACGTGACTaGGTGTTGCCCTCCAGGTCTGACATCAGCGAGACA +
Preference number: 4 (lower is better)
Translates to: EGGTRTNRRTRD*VLPSRSDISET
Trigger: TGTCTCGCTGATGTCAGACCTGGAGGGCAACACCAAGTCACGTGTCCGCCTGTTGGTCCTCGTGCCACCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
CDS-3UTR TCA 90 bp CGGGATGCAGGAACAACCAGGAACCCCATGTGGGTTGAGGAGACATGCCAATTAGCTGCAGCCTGGTCTTaGGTGAGGGCCAGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: RDAGTTRNPMWVEETCQLAAAWS*VRARPA
Trigger: TGCGGGCCTGGCCCTCACTCAAGACCAGGCTGCAGC...TAATTGGCATGTCTCCTCAACCCACATGGGGTTCCTGGTTGTTCCTGCATCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR TCA 90 bp AGGAGCTGGCGCTCTAATACAGTGAGAGCACTCGCTCAGAAGACTGTGCCTTGTTGCTGGGCACACAGGTaGGCAGGACAGCCCCCACCC +
Preference number: 4 (lower is better)
Translates to: RSWRSNTVRALAQKTVPCCWAHR*AGQPPP
Trigger: GGGTGGGGGCTGTCCTGCTCACCTGTGTGCCCAGCA...ACAAGGCACAGTCTTCTGAGCGAGTGCTCTCACTGTATTAGAGCGCCAGCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR TCA 90 bp GGCCCTGCCCCAAGGAGCTGGCGCTCTAATACAGTGAGAGCACTCGCTCAGAAGCCAGCCACTGGTCCATaGGACCTAAGCAGCCCTAAC +
Preference number: 4 (lower is better)
Translates to: GPAPRSWRSNTVRALAQKPATGP*DLSSPN
Trigger: GTTAGGGCTGCTTAGGTCTCATGGACCAGTGGCTGG...CTTCTGAGCGAGTGCTCTCACTGTATTAGAGCGCCAGCTCCTTGGGGCAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR GCA 90 bp CGCCCCATGCTCAGCGCTGTGCTTCCAGGAGCTCCTGCCAACTACGAGGGAAGTGCTGAGGTATCGGGATaGAGGAACAACCAGGAACCC +
Preference number: 4 (lower is better)
Translates to: RPMLSAVLPGAPANYEGSAEVSG*RNNQEP
Trigger: GGGTTCCTGGTTGTTCCTGCATCCCGATACCTCAGC...ACTTCCCTCGTAGTTGGCAGGAGCTCCTGGAAGCACAGCGCTGAGCATGGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CCA 90 bp TGCTCAGCGCTGTGCTTCCAGGAGCTCCTGCCAACTACGAGGGAAGTGGAGGCTCTCGATGCCGCATTCTaGTTTGGAGGGTGGCACGAG +
Preference number: 4 (lower is better)
Translates to: CSALCFQELLPTTREVEALDAAF*FGGWHE
Trigger: CTCGTGCCACCCTCCAAACCAGAATGCGGCATCGAG...AGCCTCCACTTCCCTCGTAGTTGGCAGGAGCTCCTGGAAGCACAGCGCTGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CCA 90 bp CGCCCCATGCTCAGCGCTGTGCTTCCAGGAGCTCCTGCCAACTACGAGGGAAGTCCTGCCCCAAGGAGCTaGCGCTCTAATACAGTGAGA +
Preference number: 4 (lower is better)
Translates to: RPMLSAVLPGAPANYEGSPAPRS*RSNTVR
Trigger: TCTCACTGTATTAGAGCGCCAGCTCCTTGGGGCAGG...ACTTCCCTCGTAGTTGGCAGGAGCTCCTGGAAGCACAGCGCTGAGCATGGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR CAA 72 bp GGCACGAGGACCAACAGGCGGACACGTGACTTGGTGTaGCCCTCCAGGTCTGACATCAGCGAGACAGAACAC +
Preference number: 4 (lower is better)
Translates to: GTRTNRRTRDLV*PSRSDISETEH
Trigger: GTGTTCTGTCTCGCTGATGTCAGACCTGGAGGGCAACACCAAGTCACGTGTCCGCCTGTTGGTCCTCGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
CDS-3UTR TCA 90 bp GTGGCACGAGGACCAACAGGCGGACACGTGACTTGGTGTTGCCCTCCAGGTCTGTCAGCTGATCAATGGTaGTGGAGGCATCGGACTGCT +
Preference number: 4 (lower is better)
Translates to: VARGPTGGHVTWCCPPGLSADQW*WRHRTA
Trigger: AGCAGTCCGATGCCTCCATCACCATTGATCAGCTGA...CAGACCTGGAGGGCAACACCAAGTCACGTGTCCGCCTGTTGGTCCTCGTGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
CDS-3UTR GCA 90 bp GCAGTTTCCCCAATTAAGCTTAAGTGCCCACTAGGATGGGCGCCAGCTACTAGGCCACGCCCACCGCGATaGCCACATACAGGGCCACGT +
Preference number: 4 (lower is better)
Translates to: AVSPIKLKCPLGWAPATRPRPPR*PHTGPR
Trigger: ACGTGGCCCTGTATGTGGGCATCGCGGTGGGCGTGG...CCTAGTAGCTGGCGCCCATCCTAGTGGGCACTTAAGCTTAATTGGGGAAACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CCA 90 bp TATGGTCTCTCCCTCGATGCCGCATTCTGGTTTGGAGGGTGGCACGAGGACCAAGGCGGACACGTGACTTaGTGTTGCCCTCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: YGLSLDAAFWFGGWHEDQGGHVT*CCPPGL
Trigger: CAGACCTGGAGGGCAACACCAAGTCACGTGTCCGCC...TTGGTCCTCGTGCCACCCTCCAAACCAGAATGCGGCATCGAGGGAGAGACCATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
CDS-3UTR CCA 90 bp GCCCCAAGGAGCTGGCGCTCTAATACAGTGAGAGCACTCGCTCAGAAGACTGTGCTGGCATCGCCTCCCTaGAGAGTTCTGAGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: APRSWRSNTVRALAQKTVLASPP*RVLSGS
Trigger: GCTCCCACTCAGAACTCTCCAGGGAGGCGATGCCAG...CACAGTCTTCTGAGCGAGTGCTCTCACTGTATTAGAGCGCCAGCTCCTTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CCA 90 bp CGCCCCATGCTCAGCGCTGTGCTTCCAGGAGCTCCTGCCAACTACGAGGGAAGTACCAGGAACCCCATGTaGGTTGAGGAGACATGCCAA +
Preference number: 4 (lower is better)
Translates to: RPMLSAVLPGAPANYEGSTRNPM*VEETCQ
Trigger: TTGGCATGTCTCCTCAACCCACATGGGGTTCCTGGT...ACTTCCCTCGTAGTTGGCAGGAGCTCCTGGAAGCACAGCGCTGAGCATGGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR TCA 90 bp TGCTCAGCGCTGTGCTTCCAGGAGCTCCTGCCAACTACGAGGGAAGTGGAGGCTGCCTCCAGACAGGTCTaGGCTGTCTGGTTAAAGCTA +
Preference number: 4 (lower is better)
Translates to: CSALCFQELLPTTREVEAASRQV*AVWLKL
Trigger: TAGCTTTAACCAGACAGCTCAGACCTGTCTGGAGGC...AGCCTCCACTTCCCTCGTAGTTGGCAGGAGCTCCTGGAAGCACAGCGCTGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR TCA 90 bp CTCGATGCCGCATTCTGGTTTGGAGGGTGGCACGAGGACCAACAGGCGGACACGTTGAAAACGGCCAGATaGCCACCCTTTCCGTATGAG +
Preference number: 4 (lower is better)
Translates to: LDAAFWFGGWHEDQQADTLKTAR*PPFPYE
Trigger: CTCATACGGAAAGGGTGGTCATCTGGCCGTTTTCAA...CGTGTCCGCCTGTTGGTCCTCGTGCCACCCTCCAAACCAGAATGCGGCATCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534512.1
CDS-3UTR TCA 90 bp GCCCTAACGCTGCCTGAGCTCTCAAGAGTAGAAGAAATGCTCGACAAACAGAAGCAGCCTGGTCTTGAGTaGGGGCCAGGCCCGCACCAG +
Preference number: 4 (lower is better)
Translates to: ALTLPELSRVEEMLDKQKQPGLE*GPGPHQ
Trigger: CTGGTGCGGGCCTGGCCCTCACTCAAGACCAGGCTG...CTTCTGTTTGTCGAGCATTTCTTCTACTCTTGAGAGCTCAGGCAGCGTTAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR TCA 90 bp GGCCCTGCCCCAAGGAGCTGGCGCTCTAATACAGTGAGAGCACTCGCTCAGAAGGGCGCTCTAATACAGTaGGAGCACTCGCTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: GPAPRSWRSNTVRALAQKGALIQ*EHSLRR
Trigger: TCTTCTGAGCGAGTGCTCTCACTGTATTAGAGCGCC...CTTCTGAGCGAGTGCTCTCACTGTATTAGAGCGCCAGCTCCTTGGGGCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR TCA 90 bp GGCCCTGCCCCAAGGAGCTGGCGCTCTAATACAGTGAGAGCACTCGCTCAGAAGAGCCCTAACGCTGCCTaGGCTCTCAAGAGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: GPAPRSWRSNTVRALAQKSPNAA*ALKSRR
Trigger: TCTTCTACTCTTGAGAGCTCAGGCAGCGTTAGGGCT...CTTCTGAGCGAGTGCTCTCACTGTATTAGAGCGCCAGCTCCTTGGGGCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR GCA 90 bp AAGAAAGATGTGTGGAGTGCAAACCCTCCACCTGGTGCCCCTCCAGGTGCTGGGGTGACACTCTTTCCCTaGGAAGCCCGAAGAACGTCC +
Preference number: 4 (lower is better)
Translates to: KKDVWSANPPPGAPPGAGVTLFP*EARRTS
Trigger: GGACGTTCTTCGGGCTTCGCAGGGAAAGAGTGTCAC...CCCAGCACCTGGAGGGGCACCAGGTGGAGGGTTTGCACTCCACACATCTTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR GCA 90 bp TGCTCAGCGCTGTGCTTCCAGGAGCTCCTGCCAACTACGAGGGAAGTGGAGGCTCACGTGACTTGGTGTTaGCCTCCAGGTCTGACATCA +
Preference number: 4 (lower is better)
Translates to: CSALCFQELLPTTREVEAHVTWC*PPGLTS
Trigger: TGATGTCAGACCTGGAGGGCAACACCAAGTCACGTG...AGCCTCCACTTCCCTCGTAGTTGGCAGGAGCTCCTGGAAGCACAGCGCTGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR GCA 90 bp TGCTCAGCGCTGTGCTTCCAGGAGCTCCTGCCAACTACGAGGGAAGTGGAGGCTGTGATGTTGCAGAACTaGGTCCCCTCCTCATTGCTG +
Preference number: 4 (lower is better)
Translates to: CSALCFQELLPTTREVEAVMLQN*VPSSLL
Trigger: CAGCAATGAGGAGGGGACGCAGTTCTGCAACATCAC...AGCCTCCACTTCCCTCGTAGTTGGCAGGAGCTCCTGGAAGCACAGCGCTGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CCA 90 bp GGCCCTGCCCCAAGGAGCTGGCGCTCTAATACAGTGAGAGCACTCGCTCAGAAGGGGTTTGGAACATACTaGCAGCTACGGGAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: GPAPRSWRSNTVRALAQKGFGTY*QLREVR
Trigger: CCTCACTTCCCGTAGCTGCCAGTATGTTCCAAACCC...CTTCTGAGCGAGTGCTCTCACTGTATTAGAGCGCCAGCTCCTTGGGGCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR TCA 90 bp CCCTCGATGCCGCATTCTGGTTTGGAGGGTGGCACGAGGACCAACAGGCGGACAAGGAGCTTATCCCATTaGATAAGTCCCTCTCGACTG +
Preference number: 4 (lower is better)
Translates to: PSMPHSGLEGGTRTNRRTRSLSH*ISPSRL
Trigger: CAGTCGAGAGGGACTTATTCAATGGGATAAGCTCCT...TGTCCGCCTGTTGGTCCTCGTGCCACCCTCCAAACCAGAATGCGGCATCGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
CDS-3UTR GCA 90 bp AGGCGGACACGTGACTTGGTGTTGCCCTCCAGGTCTGACATCAGCGAGACAGAATGGTCTCTCCCTCGATaGCGCATTCTGGTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: RRTRDLVLPSRSDISETEWSLPR*RILVWR
Trigger: CCTCCAAACCAGAATGCGGCATCGAGGGAGAGACCA...TTCTGTCTCGCTGATGTCAGACCTGGAGGGCAACACCAAGTCACGTGTCCGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
CDS-3UTR GCA 90 bp GCCCTAACGCTGCCTGAGCTCTCAAGAGTAGAAGAAATGCTCGACAAACAGAAGTCCGCCGCCCTCTGCTaGTGGCCTGTCACTGGTCGA +
Preference number: 4 (lower is better)
Translates to: ALTLPELSRVEEMLDKQKSAALC*WPVTGR
Trigger: TCGACCAGTGACAGGCCAGCAGCAGAGGGCGGCGGA...CTTCTGTTTGTCGAGCATTTCTTCTACTCTTGAGAGCTCAGGCAGCGTTAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR GCA 90 bp CTCAGAAGACTGTGCCTTGTGGCCCATGATTGGACGTGGGACAGAGTAACAGGACCATGCTCAGCGCTGTaGTTCCAGGAGCTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: LRRLCLVAHDWTWDRVTGPCSAL*FQELLP
Trigger: TGGCAGGAGCTCCTGGAAGCACAGCGCTGAGCATGG...TCCTGTTACTCTGTCCCACGTCCAATCATGGGCCACAAGGCACAGTCTTCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CCA 90 bp GTGACTTGGTGTTGCCCTCCAGGTCTGACATCAGCGAGACAGAACACTCGTAGGCCTCTCGACTGGAGGTaGAAGTGTGGTAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: VTWCCPPGLTSARQNTRRPLDWR*KCGRCR
Trigger: CCTGCACCTACCACACTTCCACCTCCAGTCGAGAGG...CCTACGAGTGTTCTGTCTCGCTGATGTCAGACCTGGAGGGCAACACCAAGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
CDS-3UTR CCA 90 bp CGGGATGCAGGAACAACCAGGAACCCCATGTGGGTTGAGGAGACATGCCAATTAGGCGGACACGTGACTTaGTGTTGCCCTCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: RDAGTTRNPMWVEETCQLGGHVT*CCPPGL
Trigger: CAGACCTGGAGGGCAACACCAAGTCACGTGTCCGCC...TAATTGGCATGTCTCCTCAACCCACATGGGGTTCCTGGTTGTTCCTGCATCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR TCA 90 bp AACAGGCGGACACGTGACTTGGTGTTGCCCTCCAGGTCTGACATCAGCGAGACAACCACCCTTTCCGTATaGGTGAGGAGGAGCTTATCC +
Preference number: 4 (lower is better)
Translates to: NRRTRDLVLPSRSDISETTTLSV*VRRSLS
Trigger: GGATAAGCTCCTCCTCACTCATACGGAAAGGGTGGT...TGTCTCGCTGATGTCAGACCTGGAGGGCAACACCAAGTCACGTGTCCGCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
CDS-3UTR TCA 90 bp GGCCCTGCCCCAAGGAGCTGGCGCTCTAATACAGTGAGAGCACTCGCTCAGAAGGAACCCCATGTGGGTTaGGGAGACATGCCAATTATT +
Preference number: 4 (lower is better)
Translates to: GPAPRSWRSNTVRALAQKEPHVG*GDMPII
Trigger: AATAATTGGCATGTCTCCTCAACCCACATGGGGTTC...CTTCTGAGCGAGTGCTCTCACTGTATTAGAGCGCCAGCTCCTTGGGGCAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR GCA 90 bp CAATTATGGTCTCTCCCTCGATGCCGCATTCTGGTTTGGAGGGTGGCACGAGGAGCCCGAAGAACGTCCTaGGGAGTTTCCACAGAGATG +
Preference number: 4 (lower is better)
Translates to: QLWSLPRCRILVWRVARGARRTS*GVSTEM
Trigger: CATCTCTGTGGAAACTCCGCAGGACGTTCTTCGGGC...TCCTCGTGCCACCCTCCAAACCAGAATGCGGCATCGAGGGAGAGACCATAATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
CDS-3UTR GCA 90 bp AGGAGCTGGCGCTCTAATACAGTGAGAGCACTCGCTCAGAAGACTGTGCCTTGTTGGAGGCCAGGCCAATaGAGGGCCCAAGCATACTCA +
Preference number: 4 (lower is better)
Translates to: RSWRSNTVRALAQKTVPCWRPGQ*RAQAYS
Trigger: TGAGTATGCTTGGGCCCTGCATTGGCCTGGCCTCCA...ACAAGGCACAGTCTTCTGAGCGAGTGCTCTCACTGTATTAGAGCGCCAGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR GCA 90 bp GATTGGACGTGGGACAGAGTAACAGGATTGTTTCCACGTATGTGGACAATTAGGATGAGGCCCAGGCCCTaGCCCAAGGAGCTGGCGCTC +
Preference number: 4 (lower is better)
Translates to: DWTWDRVTGLFPRMWTIRMRPRP*PKELAL
Trigger: GAGCGCCAGCTCCTTGGGGCAGGGCCTGGGCCTCAT...CCTAATTGTCCACATACGTGGAAACAATCCTGTTACTCTGTCCCACGTCCAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CCA 90 bp AGGAGCTGGCGCTCTAATACAGTGAGAGCACTCGCTCAGAAGACTGTGCCTTGTCCTCTCGACTGGAGGTaGAAGTGTGGTAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: RSWRSNTVRALAQKTVPCPLDWR*KCGRCR
Trigger: CCTGCACCTACCACACTTCCACCTCCAGTCGAGAGG...ACAAGGCACAGTCTTCTGAGCGAGTGCTCTCACTGTATTAGAGCGCCAGCTCCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CCA 90 bp GCCCCAAGGAGCTGGCGCTCTAATACAGTGAGAGCACTCGCTCAGAAGACTGTGGAGCCCTCCTTTGATTaGCAGGTCAGCTGGATGTTG +
Preference number: 4 (lower is better)
Translates to: APRSWRSNTVRALAQKTVEPSFD*QVSWML
Trigger: CAACATCCAGCTGACCTGCCAATCAAAGGAGGGCTC...CACAGTCTTCTGAGCGAGTGCTCTCACTGTATTAGAGCGCCAGCTCCTTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CCA 90 bp GCCCTAACGCTGCCTGAGCTCTCAAGAGTAGAAGAAATGCTCGACAAACAGAAGCTGCTGGCCTGTCACTaGTCGAGGTGGTCCGGGGAT +
Preference number: 4 (lower is better)
Translates to: ALTLPELSRVEEMLDKQKLLACH*SRWSGD
Trigger: ATCCCCGGACCACCTCGACCAGTGACAGGCCAGCAG...CTTCTGTTTGTCGAGCATTTCTTCTACTCTTGAGAGCTCAGGCAGCGTTAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CCA 90 bp GGCCCTGCCCCAAGGAGCTGGCGCTCTAATACAGTGAGAGCACTCGCTCAGAAGATGAATACGTGGGTTTaGGTGGGAATCATCCCTGTG +
Preference number: 4 (lower is better)
Translates to: GPAPRSWRSNTVRALAQKMNTWV*VGIIPV
Trigger: CACAGGGATGATTCCCACCCAAACCCACGTATTCAT...CTTCTGAGCGAGTGCTCTCACTGTATTAGAGCGCCAGCTCCTTGGGGCAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR TCA 90 bp GCGAGACAGAACACTCGTAGGTGCCGTTGTCAGCCATGGTCAGCTGATCAATGGTCAGCCATGGTCAGCTaGTCAATGGTGATGGAGGCA +
Preference number: 4 (lower is better)
Translates to: ARQNTRRCRCQPWSADQWSAMVS*SMVMEA
Trigger: TGCCTCCATCACCATTGATCAGCTGACCATGGCTGA...CCATTGATCAGCTGACCATGGCTGACAACGGCACCTACGAGTGTTCTGTCTCGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
CDS-3UTR TCA 90 bp GGTCAGCTGATCAATGGTGATGGAGGCATCGGACTGCTCAGCATTGTTGGATATCAACAGGCGGACACGTaGCTTGGTGTTGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GQLINGDGGIGLLSIVGYQQADT*LGVALQ
Trigger: CTGGAGGGCAACACCAAGTCACGTGTCCGCCTGTTG...ATATCCAACAATGCTGAGCAGTCCGATGCCTCCATCACCATTGATCAGCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
CDS-3UTR TCA 90 bp TGTGGGTTGAGGAGACATGCCAATTATTCTGGCCTGGAGAGGAATTACCAGGACGGCAGCTACGGGAAGTaGGGTTGGAAAGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: CGLRRHANYSGLERNYQDGSYGK*GWKGSG
Trigger: CCCACTCCCTTTCCAACCTCACTTCCCGTAGCTGCC...GTCCTGGTAATTCCTCTCCAGGCCAGAATAATTGGCATGTCTCCTCAACCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR TCA 90 bp GCCCCAAGGAGCTGGCGCTCTAATACAGTGAGAGCACTCGCTCAGAAGACTGTGGAAATCCTTGTGATTTaGGATGGGCCTGGAGGGACA +
Preference number: 4 (lower is better)
Translates to: APRSWRSNTVRALAQKTVEILVI*DGPGGT
Trigger: TGTCCCTCCAGGCCCATCTCAAATCACAAGGATTTC...CACAGTCTTCTGAGCGAGTGCTCTCACTGTATTAGAGCGCCAGCTCCTTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR TCA 90 bp GGAACAACCAGGAACCCCATGTGGGTTGAGGAGACATGCCAATTATTCTGGCCTGTGCCTTGTGGCCCATaGTTGGACGTGGGACAGAGT +
Preference number: 4 (lower is better)
Translates to: GTTRNPMWVEETCQLFWPVPCGP*LDVGQS
Trigger: ACTCTGTCCCACGTCCAATCATGGGCCACAAGGCAC...AGGCCAGAATAATTGGCATGTCTCCTCAACCCACATGGGGTTCCTGGTTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR GCA 90 bp GCCGTTGTCAGCCATGGTCAGCTGATCAATGGTGATGGAGGCATCGGACTGCTCTCCCCACCATGGTCTTaGTTCTTCTCTGCCCTAAAC +
Preference number: 4 (lower is better)
Translates to: AVVSHGQLINGDGGIGLLSPPWS*FFSALN
Trigger: GTTTAGGGCAGAGAAGAAGCAAGACCATGGTGGGGA...GAGCAGTCCGATGCCTCCATCACCATTGATCAGCTGACCATGGCTGACAACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534512.1
CDS-3UTR GCA 90 bp CTCAGAAGACTGTGCCTTGTGGCCCATGATTGGACGTGGGACAGAGTAACAGGAGCCCGAAGAACGTCCTaGGGAGTTTCCACAGAGATG +
Preference number: 4 (lower is better)
Translates to: LRRLCLVAHDWTWDRVTGARRTS*GVSTEM
Trigger: CATCTCTGTGGAAACTCCGCAGGACGTTCTTCGGGC...TCCTGTTACTCTGTCCCACGTCCAATCATGGGCCACAAGGCACAGTCTTCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CCA 90 bp TGCTCAGCGCTGTGCTTCCAGGAGCTCCTGCCAACTACGAGGGAAGTGGAGGCTGATTGGCAGGTCAGCTaGATGTTGTTCCCAATTATG +
Preference number: 4 (lower is better)
Translates to: CSALCFQELLPTTREVEADWQVS*MLFPIM
Trigger: CATAATTGGGAACAACATCCAGCTGACCTGCCAATC...AGCCTCCACTTCCCTCGTAGTTGGCAGGAGCTCCTGGAAGCACAGCGCTGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CCA 90 bp ACCCCATGTGGGTTGAGGAGACATGCCAATTATTCTGGCCTGGAGAGGAATTACAAAGGGAGTGGGAGCTaGAGGCCAGGCCAATGCAGG +
Preference number: 4 (lower is better)
Translates to: TPCGLRRHANYSGLERNYKGSGS*RPGQCR
Trigger: CCTGCATTGGCCTGGCCTCCAGCTCCCACTCCCTTT...GTAATTCCTCTCCAGGCCAGAATAATTGGCATGTCTCCTCAACCCACATGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CCA 90 bp AAGAAAGATGTGTGGAGTGCAAACCCTCCACCTGGTGCCCCTCCAGGTGCTGGGATACGTGGGTTTGGGTaGGAATCATCCCTGTGTCTA +
Preference number: 4 (lower is better)
Translates to: KKDVWSANPPPGAPPGAGIRGFG*ESSLCL
Trigger: TAGACACAGGGATGATTCCCACCCAAACCCACGTAT...CCCAGCACCTGGAGGGGCACCAGGTGGAGGGTTTGCACTCCACACATCTTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CCA 90 bp CGATGCCGCATTCTGGTTTGGAGGGTGGCACGAGGACCAACAGGCGGACACGTGTGGATTCTGAGATCGTaGGGCAATCTGAGATTTCTT +
Preference number: 4 (lower is better)
Translates to: RCRILVWRVARGPTGGHVWILRS*GNLRFL
Trigger: AAGAAATCTCAGATTGCCCCACGATCTCAGAATCCA...CACGTGTCCGCCTGTTGGTCCTCGTGCCACCCTCCAAACCAGAATGCGGCATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
CDS-3UTR TCA 90 bp GCCCTAACGCTGCCTGAGCTCTCAAGAGTAGAAGAAATGCTCGACAAACAGAAGGCCAGGGGCTGCTCCTaGTTCAGGATGTTGTACCTC +
Preference number: 4 (lower is better)
Translates to: ALTLPELSRVEEMLDKQKARGCS*FRMLYL
Trigger: GAGGTACAACATCCTGAATCAGGAGCAGCCCCTGGC...CTTCTGTTTGTCGAGCATTTCTTCTACTCTTGAGAGCTCAGGCAGCGTTAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR GCA 90 bp GCCCCAAGGAGCTGGCGCTCTAATACAGTGAGAGCACTCGCTCAGAAGACTGTGATGGAGGCATCGGACTaGTCAGCATTGTTGGATATG +
Preference number: 4 (lower is better)
Translates to: APRSWRSNTVRALAQKTVMEASD*SALLDM
Trigger: CATATCCAACAATGCTGAGCAGTCCGATGCCTCCAT...CACAGTCTTCTGAGCGAGTGCTCTCACTGTATTAGAGCGCCAGCTCCTTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR GCA 90 bp GCAGTTTCCCCAATTAAGCTTAAGTGCCCACTAGGATGGGCGCCAGCTACTAGGCAGAACACTCGTAGGTaGCGTTGTCAGCCATGGTCA +
Preference number: 4 (lower is better)
Translates to: AVSPIKLKCPLGWAPATRQNTRR*RCQPWS
Trigger: TGACCATGGCTGACAACGGCACCTACGAGTGTTCTG...CCTAGTAGCTGGCGCCCATCCTAGTGGGCACTTAAGCTTAATTGGGGAAACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR GCA 90 bp ACATCAGCGAGACAGAACACTCGTAGGTGCCGTTGTCAGCCATGGTCAGCTGATCACGTGACTTGGTGTTaGCCTCCAGGTCTGACATCA +
Preference number: 4 (lower is better)
Translates to: TSARQNTRRCRCQPWSADHVTWC*PPGLTS
Trigger: TGATGTCAGACCTGGAGGGCAACACCAAGTCACGTG...ATCAGCTGACCATGGCTGACAACGGCACCTACGAGTGTTCTGTCTCGCTGATGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
CDS-3UTR GCA 90 bp CGGGATGCAGGAACAACCAGGAACCCCATGTGGGTTGAGGAGACATGCCAATTATTCCCGGTTCGGCCTTaGATCCTCCTTGTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: RDAGTTRNPMWVEETCQLFPVRP*ILLVFS
Trigger: ACTGAAGACAAGGAGGATGCAAGGCCGAACCGGGAA...TAATTGGCATGTCTCCTCAACCCACATGGGGTTCCTGGTTGTTCCTGCATCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR GCA 90 bp ACCCCATGTGGGTTGAGGAGACATGCCAATTATTCTGGCCTGGAGAGGAATTACGAGGGAAGTGGAGGCTaGAGCCTGGTCTTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: TPCGLRRHANYSGLERNYEGSGG*SLVLSE
Trigger: CTCACTCAAGACCAGGCTGCAGCCTCCACTTCCCTC...GTAATTCCTCTCCAGGCCAGAATAATTGGCATGTCTCCTCAACCCACATGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR GCA 90 bp GCAGTTTCCCCAATTAAGCTTAAGTGCCCACTAGGATGGGCGCCAGCTACTAGGGAAAGATGTGTGGAGTaGAAACCCTCCACCTGGTGC +
Preference number: 4 (lower is better)
Translates to: AVSPIKLKCPLGWAPATRERCVE*KPSTWC
Trigger: GCACCAGGTGGAGGGTTTGCACTCCACACATCTTTC...CCTAGTAGCTGGCGCCCATCCTAGTGGGCACTTAAGCTTAATTGGGGAAACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR GCA 90 bp AAGAAAGATGTGTGGAGTGCAAACCCTCCACCTGGTGCCCCTCCAGGTGCTGGGATAGCAATAGTAAACTaGAGTTGGGTGAGACCAGCC +
Preference number: 4 (lower is better)
Translates to: KKDVWSANPPPGAPPGAGIAIVN*SWVRPA
Trigger: GGCTGGTCTCACCCAACTGCAGTTTACTATTGCTAT...CCCAGCACCTGGAGGGGCACCAGGTGGAGGGTTTGCACTCCACACATCTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CCA 90 bp GCGAGACAGAACACTCGTAGGTGCCGTTGTCAGCCATGGTCAGCTGATCAATGGACATCTTCCCCACCATaGTCTTGCTTCTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: ARQNTRRCRCQPWSADQWTSSPP*SCFFSA
Trigger: GGCAGAGAAGAAGCAAGACCATGGTGGGGAAGATGT...CCATTGATCAGCTGACCATGGCTGACAACGGCACCTACGAGTGTTCTGTCTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534512.1
CDS-3UTR CCA 90 bp TGGACGTGGGACAGAGTAACAGGATTGTTTCCACGTATGTGGACAATTAGGATAGCCGCCCTCTGCTGCTaGCCTGTCACTGGTCGAGGT +
Preference number: 4 (lower is better)
Translates to: WTWDRVTGLFPRMWTIRIAALCC*PVTGRG
Trigger: ACCTCGACCAGTGACAGGCCAGCAGCAGAGGGCGGC...TATCCTAATTGTCCACATACGTGGAAACAATCCTGTTACTCTGTCCCACGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CCA 90 bp CGGGATGCAGGAACAACCAGGAACCCCATGTGGGTTGAGGAGACATGCCAATTACTTCCCAGGAGGGTTTaGAACATACTGGCAGCTACG +
Preference number: 4 (lower is better)
Translates to: RDAGTTRNPMWVEETCQLLPRRV*NILAAT
Trigger: CGTAGCTGCCAGTATGTTCCAAACCCTCCTGGGAAG...TAATTGGCATGTCTCCTCAACCCACATGGGGTTCCTGGTTGTTCCTGCATCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CCA 90 bp AGGAGCTGGCGCTCTAATACAGTGAGAGCACTCGCTCAGAAGACTGTGCCTTGTCCTTGTGATTTGAGATaGGCCTGGAGGGACAGGTAC +
Preference number: 4 (lower is better)
Translates to: RSWRSNTVRALAQKTVPCPCDLR*AWRDRY
Trigger: GTACCTGTCCCTCCAGGCCCATCTCAAATCACAAGG...ACAAGGCACAGTCTTCTGAGCGAGTGCTCTCACTGTATTAGAGCGCCAGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR TCA 90 bp GGAACAACCAGGAACCCCATGTGGGTTGAGGAGACATGCCAATTATTCTGGCCTACCACCCTTTCCGTATaGGTGAGGAGGAGCTTATCC +
Preference number: 4 (lower is better)
Translates to: GTTRNPMWVEETCQLFWPTTLSV*VRRSLS
Trigger: GGATAAGCTCCTCCTCACTCATACGGAAAGGGTGGT...AGGCCAGAATAATTGGCATGTCTCCTCAACCCACATGGGGTTCCTGGTTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR GCA 90 bp AGAACACTCGTAGGTGCCGTTGTCAGCCATGGTCAGCTGATCAATGGTGATGGACAGAACACTCGTAGGTaGCGTTGTCAGCCATGGTCA +
Preference number: 4 (lower is better)
Translates to: RTLVGAVVSHGQLINGDGQNTRR*RCQPWS
Trigger: TGACCATGGCTGACAACGGCACCTACGAGTGTTCTG...TCCATCACCATTGATCAGCTGACCATGGCTGACAACGGCACCTACGAGTGTTCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
CDS-3UTR GCA 90 bp ACCCCATGTGGGTTGAGGAGACATGCCAATTATTCTGGCCTGGAGAGGAATTACTGGTCTCTCCCTCGATaGCGCATTCTGGTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: TPCGLRRHANYSGLERNYWSLPR*RILVWR
Trigger: CCTCCAAACCAGAATGCGGCATCGAGGGAGAGACCA...GTAATTCCTCTCCAGGCCAGAATAATTGGCATGTCTCCTCAACCCACATGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR GCA 90 bp GGAACAACCAGGAACCCCATGTGGGTTGAGGAGACATGCCAATTATTCTGGCCTAATGATAATGAGGGCTaGAACCACGCCCACCGCGAT +
Preference number: 4 (lower is better)
Translates to: GTTRNPMWVEETCQLFWPNDNEG*NHAHRD
Trigger: ATCGCGGTGGGCGTGGTTGCAGCCCTCATTATCATT...AGGCCAGAATAATTGGCATGTCTCCTCAACCCACATGGGGTTCCTGGTTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR GCA 90 bp TGGACGTGGGACAGAGTAACAGGATTGTTTCCACGTATGTGGACAATTAGGATAAGTGGGAGCGCCCCATaGTCAGCGCTGTGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: WTWDRVTGLFPRMWTIRISGSAP*SALCFQ
Trigger: CTGGAAGCACAGCGCTGAGCATGGGGCGCTCCCACT...TATCCTAATTGTCCACATACGTGGAAACAATCCTGTTACTCTGTCCCACGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CCA 90 bp AGGAGCTGGCGCTCTAATACAGTGAGAGCACTCGCTCAGAAGACTGTGCCTTGTCCTCCTCCCTCTCTCTaGAAAGTTCTCTTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RSWRSNTVRALAQKTVPCPPPSL*KVLLAA
Trigger: AGCAGCTAAGAGAACTTTCCAGAGAGAGGGAGGAGG...ACAAGGCACAGTCTTCTGAGCGAGTGCTCTCACTGTATTAGAGCGCCAGCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CCA 90 bp GCCCTAACGCTGCCTGAGCTCTCAAGAGTAGAAGAAATGCTCGACAAACAGAAGGAGATGGAAAGTGTGTaGGCAAAAGCTCCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: ALTLPELSRVEEMLDKQKEMESV*AKAPQG
Trigger: GCCCTGGGGAGCTTTTGCCCACACACTTTCCATCTC...CTTCTGTTTGTCGAGCATTTCTTCTACTCTTGAGAGCTCAGGCAGCGTTAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CCA 90 bp CTCAGAAGACTGTGCCTTGTGGCCCATGATTGGACGTGGGACAGAGTAACAGGAGCCCATGATTGGACGTaGGACAGAGTAACAGGATTG +
Preference number: 4 (lower is better)
Translates to: LRRLCLVAHDWTWDRVTGAHDWT*DRVTGL
Trigger: CAATCCTGTTACTCTGTCCCACGTCCAATCATGGGC...TCCTGTTACTCTGTCCCACGTCCAATCATGGGCCACAAGGCACAGTCTTCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR TCA 90 bp AGAACACTCGTAGGTGCCGTTGTCAGCCATGGTCAGCTGATCAATGGTGATGGACCCTTTCCGTATGAGTaGGGAGGAGCTTATCCCATT +
Preference number: 4 (lower is better)
Translates to: RTLVGAVVSHGQLINGDGPFPYE*GGAYPI
Trigger: AATGGGATAAGCTCCTCCTCACTCATACGGAAAGGG...TCCATCACCATTGATCAGCTGACCATGGCTGACAACGGCACCTACGAGTGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
CDS-3UTR TCA 90 bp AACAGGCGGACACGTGACTTGGTGTTGCCCTCCAGGTCTGACATCAGCGAGACAGATGTAGTTTTTGTTTaGAAACGGCCAGATGACCAC +
Preference number: 4 (lower is better)
Translates to: NRRTRDLVLPSRSDISETDVVFV*KRPDDH
Trigger: GTGGTCATCTGGCCGTTTTCAAACAAAAACTACATC...TGTCTCGCTGATGTCAGACCTGGAGGGCAACACCAAGTCACGTGTCCGCCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534512.1
CDS-3UTR TCA 90 bp GCCCTAACGCTGCCTGAGCTCTCAAGAGTAGAAGAAATGCTCGACAAACAGAAGTCAGCCATGGTCAGCTaGTCAATGGTGATGGAGGCA +
Preference number: 4 (lower is better)
Translates to: ALTLPELSRVEEMLDKQKSAMVS*SMVMEA
Trigger: TGCCTCCATCACCATTGATCAGCTGACCATGGCTGA...CTTCTGTTTGTCGAGCATTTCTTCTACTCTTGAGAGCTCAGGCAGCGTTAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR TCA 90 bp TGGACGTGGGACAGAGTAACAGGATTGTTTCCACGTATGTGGACAATTAGGATACTCTTCCAGCTGTACTaGGGGGTTGGTGAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: WTWDRVTGLFPRMWTIRILFQLY*GVGEPS
Trigger: GGAGGGCTCACCAACCCCTCAGTACAGCTGGAAGAG...TATCCTAATTGTCCACATACGTGGAAACAATCCTGTTACTCTGTCCCACGTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR TCA 90 bp GCCCTAACGCTGCCTGAGCTCTCAAGAGTAGAAGAAATGCTCGACAAACAGAAGTACTTCACAGGACAGTaGGGTCAGCAGGATCAGCAC +
Preference number: 4 (lower is better)
Translates to: ALTLPELSRVEEMLDKQKYFTGQ*GQQDQH
Trigger: GTGCTGATCCTGCTGACCTCACTGTCCTGTGAAGTA...CTTCTGTTTGTCGAGCATTTCTTCTACTCTTGAGAGCTCAGGCAGCGTTAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR GCA 90 bp GGAACAACCAGGAACCCCATGTGGGTTGAGGAGACATGCCAATTATTCTGGCCTTCCCCACCATGGTCTTaGTTCTTCTCTGCCCTAAAC +
Preference number: 4 (lower is better)
Translates to: GTTRNPMWVEETCQLFWPSPPWS*FFSALN
Trigger: GTTTAGGGCAGAGAAGAAGCAAGACCATGGTGGGGA...AGGCCAGAATAATTGGCATGTCTCCTCAACCCACATGGGGTTCCTGGTTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR GCA 90 bp GCCCTAACGCTGCCTGAGCTCTCAAGAGTAGAAGAAATGCTCGACAAACAGAAGGCGTCCCCTCCTCATTaGTGGAGGTACAGATGTAGT +
Preference number: 4 (lower is better)
Translates to: ALTLPELSRVEEMLDKQKASPPH*WRYRCS
Trigger: ACTACATCTGTACCTCCAGCAATGAGGAGGGGACGC...CTTCTGTTTGTCGAGCATTTCTTCTACTCTTGAGAGCTCAGGCAGCGTTAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR GCA 90 bp GATTGGACGTGGGACAGAGTAACAGGATTGTTTCCACGTATGTGGACAATTAGGGGGATTCACGCCCAGTaGTCCTCTGCTCTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: DWTWDRVTGLFPRMWTIRGIHAQ*SSALLA
Trigger: GGCAAGAAGAGCAGAGGAGCACTGGGCGTGAATCCC...CCTAATTGTCCACATACGTGGAAACAATCCTGTTACTCTGTCCCACGTCCAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR GCA 90 bp TGTGGGTTGAGGAGACATGCCAATTATTCTGGCCTGGAGAGGAATTACCAGGACTCGCTCAGAAGACTGTaGCTTGTGGCCCATGATTGG +
Preference number: 4 (lower is better)
Translates to: CGLRRHANYSGLERNYQDSLRRL*LVAHDW
Trigger: CCAATCATGGGCCACAAGGCACAGTCTTCTGAGCGA...GTCCTGGTAATTCCTCTCCAGGCCAGAATAATTGGCATGTCTCCTCAACCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR GCA 90 bp AGGCGGACACGTGACTTGGTGTTGCCCTCCAGGTCTGACATCAGCGAGACAGAACTTTTATTTCCCAAATaGTCTGCACAGAGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: RRTRDLVLPSRSDISETELLFPK*SAQSVH
Trigger: GTGGACACTCTGTGCAGAGCATTTGGGAAATAAAAG...TTCTGTCTCGCTGATGTCAGACCTGGAGGGCAACACCAAGTCACGTGTCCGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534512.1
CDS-3UTR CCA 90 bp TGTGGGTTGAGGAGACATGCCAATTATTCTGGCCTGGAGAGGAATTACCAGGACCATCAATGTCTGGGATaGAGGGACAGGAGAACAGGG +
Preference number: 4 (lower is better)
Translates to: CGLRRHANYSGLERNYQDHQCLG*RDRRTG
Trigger: CCCTGTTCTCCTGTCCCTCCATCCCAGACATTGATG...GTCCTGGTAATTCCTCTCCAGGCCAGAATAATTGGCATGTCTCCTCAACCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CCA 90 bp ACCCCATGTGGGTTGAGGAGACATGCCAATTATTCTGGCCTGGAGAGGAATTACGTCCCCATCAATGTCTaGGATGGAGGGACAGGAGAA +
Preference number: 4 (lower is better)
Translates to: TPCGLRRHANYSGLERNYVPINV*DGGTGE
Trigger: TTCTCCTGTCCCTCCATCCCAGACATTGATGGGGAC...GTAATTCCTCTCCAGGCCAGAATAATTGGCATGTCTCCTCAACCCACATGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR TCA 90 bp GCCCTAACGCTGCCTGAGCTCTCAAGAGTAGAAGAAATGCTCGACAAACAGAAGCCCTTTCCGTATGAGTaGGGAGGAGCTTATCCCATT +
Preference number: 4 (lower is better)
Translates to: ALTLPELSRVEEMLDKQKPFPYE*GGAYPI
Trigger: AATGGGATAAGCTCCTCCTCACTCATACGGAAAGGG...CTTCTGTTTGTCGAGCATTTCTTCTACTCTTGAGAGCTCAGGCAGCGTTAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR TCA 90 bp TGCCCTCCAGGTCTGACATCAGCGAGACAGAACACTCGTAGGTGCCGTTGTCAGCATTGTTGGATATGCTaGCGCGATTCTTATAAAGCT +
Preference number: 4 (lower is better)
Translates to: CPPGLTSARQNTRRCRCQHCWIC*RDSYKA
Trigger: AGCTTTATAAGAATCGCGTCAGCATATCCAACAATG...CTGACAACGGCACCTACGAGTGTTCTGTCTCGCTGATGTCAGACCTGGAGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
CDS-3UTR TCA 90 bp AAGGCACAACCAATCAAAGCAGTTTCCCCAATTAAGCTTAAGTGCCCACTAGGACAGGAAGCGGGAGAATaGACCCCTAACCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: KAQPIKAVSPIKLKCPLGQEAGE*TPNPSS
Trigger: GGAGGAAGGGTTAGGGGTTCATTCTCCCGCTTCCTG...TCCTAGTGGGCACTTAAGCTTAATTGGGGAAACTGCTTTGATTGGTTGTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR GCA 90 bp AAGGCACAACCAATCAAAGCAGTTTCCCCAATTAAGCTTAAGTGCCCACTAGGAGCTTCCAGGAGCTCCTaGCAACTACGAGGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: KAQPIKAVSPIKLKCPLGASRSS*QLRGKW
Trigger: CCACTTCCCTCGTAGTTGGCAGGAGCTCCTGGAAGC...TCCTAGTGGGCACTTAAGCTTAATTGGGGAAACTGCTTTGATTGGTTGTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR GCA 90 bp GGAACAACCAGGAACCCCATGTGGGTTGAGGAGACATGCCAATTATTCTGGCCTAGAACTCAGACCATCTaGAAGCAAGCTCCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: GTTRNPMWVEETCQLFWPRTQTI*KQAPLC
Trigger: ACACAAGGGAGCTTGCTTGCAGATGGTCTGAGTTCT...AGGCCAGAATAATTGGCATGTCTCCTCAACCCACATGGGGTTCCTGGTTGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CCA 90 bp TGGACGTGGGACAGAGTAACAGGATTGTTTCCACGTATGTGGACAATTAGGATATGCCGCATTCTGGTTTaGAGGGTGGCACGAGGACCA +
Preference number: 4 (lower is better)
Translates to: WTWDRVTGLFPRMWTIRICRILV*RVARGP
Trigger: TGGTCCTCGTGCCACCCTCCAAACCAGAATGCGGCA...TATCCTAATTGTCCACATACGTGGAAACAATCCTGTTACTCTGTCCCACGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CCA 90 bp TGTGGGTTGAGGAGACATGCCAATTATTCTGGCCTGGAGAGGAATTACCAGGACTGTTGTTCCCAATTATaGTCTCTCCCTCGATGCCGC +
Preference number: 4 (lower is better)
Translates to: CGLRRHANYSGLERNYQDCCSQL*SLPRCR
Trigger: GCGGCATCGAGGGAGAGACCATAATTGGGAACAACA...GTCCTGGTAATTCCTCTCCAGGCCAGAATAATTGGCATGTCTCCTCAACCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CCA 90 bp GATTGGACGTGGGACAGAGTAACAGGATTGTTTCCACGTATGTGGACAATTAGGGGTGAGACCAGCCACTaGTCCATGAGACCTAAGCAG +
Preference number: 4 (lower is better)
Translates to: DWTWDRVTGLFPRMWTIRGETSH*SMRPKQ
Trigger: CTGCTTAGGTCTCATGGACCAGTGGCTGGTCTCACC...CCTAATTGTCCACATACGTGGAAACAATCCTGTTACTCTGTCCCACGTCCAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR TCA 90 bp CGGGATGCAGGAACAACCAGGAACCCCATGTGGGTTGAGGAGACATGCCAATTAGATGTAGTTTTTGTTTaGAAACGGCCAGATGACCAC +
Preference number: 4 (lower is better)
Translates to: RDAGTTRNPMWVEETCQLDVVFV*KRPDDH
Trigger: GTGGTCATCTGGCCGTTTTCAAACAAAAACTACATC...TAATTGGCATGTCTCCTCAACCCACATGGGGTTCCTGGTTGTTCCTGCATCCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR GCA 90 bp GGTCAGCTGATCAATGGTGATGGAGGCATCGGACTGCTCAGCATTGTTGGATATATGGAGGCATCGGACTaGTCAGCATTGTTGGATATG +
Preference number: 4 (lower is better)
Translates to: GQLINGDGGIGLLSIVGYMEASD*SALLDM
Trigger: CATATCCAACAATGCTGAGCAGTCCGATGCCTCCAT...ATATCCAACAATGCTGAGCAGTCCGATGCCTCCATCACCATTGATCAGCTGACC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
CDS-3UTR TCA 90 bp GATTGGACGTGGGACAGAGTAACAGGATTGTTTCCACGTATGTGGACAATTAGGTTGAAAACGGCCAGATaGCCACCCTTTCCGTATGAG +
Preference number: 4 (lower is better)
Translates to: DWTWDRVTGLFPRMWTIRLKTAR*PPFPYE
Trigger: CTCATACGGAAAGGGTGGTCATCTGGCCGTTTTCAA...CCTAATTGTCCACATACGTGGAAACAATCCTGTTACTCTGTCCCACGTCCAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR TCA 90 bp AAGGCACAACCAATCAAAGCAGTTTCCCCAATTAAGCTTAAGTGCCCACTAGGATCAGCTGATCAATGGTaGTGGAGGCATCGGACTGCT +
Preference number: 4 (lower is better)
Translates to: KAQPIKAVSPIKLKCPLGSADQW*WRHRTA
Trigger: AGCAGTCCGATGCCTCCATCACCATTGATCAGCTGA...TCCTAGTGGGCACTTAAGCTTAATTGGGGAAACTGCTTTGATTGGTTGTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR TCA 90 bp GGTCAGCTGATCAATGGTGATGGAGGCATCGGACTGCTCAGCATTGTTGGATATGATCGTGGGGCAATCTaGGATTTCTTCTATGTGTAC +
Preference number: 4 (lower is better)
Translates to: GQLINGDGGIGLLSIVGYDRGAI*DFFYVY
Trigger: GTACACATAGAAGAAATCTCAGATTGCCCCACGATC...ATATCCAACAATGCTGAGCAGTCCGATGCCTCCATCACCATTGATCAGCTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534512.1
CDS-3UTR CCA 90 bp TGGACGTGGGACAGAGTAACAGGATTGTTTCCACGTATGTGGACAATTAGGATAAACCTAACCTGTCACTaGCAGCCTCCAGACAGGTCT +
Preference number: 4 (lower is better)
Translates to: WTWDRVTGLFPRMWTIRINLTCH*QPPDRS
Trigger: AGACCTGTCTGGAGGCTGCCAGTGACAGGTTAGGTT...TATCCTAATTGTCCACATACGTGGAAACAATCCTGTTACTCTGTCCCACGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CCA 90 bp GCCCTAACGCTGCCTGAGCTCTCAAGAGTAGAAGAAATGCTCGACAAACAGAAGAACCCGATGTGTCTGTaGAGATATTCTTCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: ALTLPELSRVEEMLDKQKNPMCL*RYSSGR
Trigger: TCTCCCTGAAGAATATCTCCACAGACACATCGGGTT...CTTCTGTTTGTCGAGCATTTCTTCTACTCTTGAGAGCTCAGGCAGCGTTAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR TCA 90 bp GCCCTAACGCTGCCTGAGCTCTCAAGAGTAGAAGAAATGCTCGACAAACAGAAGTCGTGTTTAACTCACTaGATGAATACGTGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: ALTLPELSRVEEMLDKQKSCLTH*MNTWVW
Trigger: CCAAACCCACGTATTCATTCAGTGAGTTAAACACGA...CTTCTGTTTGTCGAGCATTTCTTCTACTCTTGAGAGCTCAGGCAGCGTTAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CCA 90 bp TGGACGTGGGACAGAGTAACAGGATTGTTTCCACGTATGTGGACAATTAGGATAACATCTTCCCCACCATaGTCTTGCTTCTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: WTWDRVTGLFPRMWTIRITSSPP*SCFFSA
Trigger: GGCAGAGAAGAAGCAAGACCATGGTGGGGAAGATGT...TATCCTAATTGTCCACATACGTGGAAACAATCCTGTTACTCTGTCCCACGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
3UTR CAA 72 bp GTGGCCCATGATTGGACGTGGGACAGAGTAACAGGATaGTTTCCACGTATGTGGACAATTAGGATAGGGTTA +
Preference number: 4 (lower is better)
Translates to: VAHDWTWDRVTG*FPRMWTIRIGL
Trigger: TAACCCTATCCTAATTGTCCACATACGTGGAAACAATCCTGTTACTCTGTCCCACGTCCAATCATGGGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR TCA 90 bp AAGGCACAACCAATCAAAGCAGTTTCCCCAATTAAGCTTAAGTGCCCACTAGGAAGGAGCTTATCCCATTaGATAAGTCCCTCTCGACTG +
Preference number: 4 (lower is better)
Translates to: KAQPIKAVSPIKLKCPLGRSLSH*ISPSRL
Trigger: CAGTCGAGAGGGACTTATTCAATGGGATAAGCTCCT...TCCTAGTGGGCACTTAAGCTTAATTGGGGAAACTGCTTTGATTGGTTGTGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR TCA 90 bp GCCCTAACGCTGCCTGAGCTCTCAAGAGTAGAAGAAATGCTCGACAAACAGAAGCATTGTTGGATATGCTaGCGCGATTCTTATAAAGCT +
Preference number: 4 (lower is better)
Translates to: ALTLPELSRVEEMLDKQKHCWIC*RDSYKA
Trigger: AGCTTTATAAGAATCGCGTCAGCATATCCAACAATG...CTTCTGTTTGTCGAGCATTTCTTCTACTCTTGAGAGCTCAGGCAGCGTTAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CCA 90 bp GGAACAACCAGGAACCCCATGTGGGTTGAGGAGACATGCCAATTATTCTGGCCTTTGTTTCCACGTATGTaGACAATTAGGATAGGGTTA +
Preference number: 4 (lower is better)
Translates to: GTTRNPMWVEETCQLFWPLFPRM*TIRIGL
Trigger: TAACCCTATCCTAATTGTCCACATACGTGGAAACAA...AGGCCAGAATAATTGGCATGTCTCCTCAACCCACATGGGGTTCCTGGTTGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CCA 90 bp AAGGCACAACCAATCAAAGCAGTTTCCCCAATTAAGCTTAAGTGCCCACTAGGAATAGTAAACTGCAGTTaGGTGAGACCAGCCACTGGT +
Preference number: 4 (lower is better)
Translates to: KAQPIKAVSPIKLKCPLGIVNCS*VRPATG
Trigger: ACCAGTGGCTGGTCTCACCCAACTGCAGTTTACTAT...TCCTAGTGGGCACTTAAGCTTAATTGGGGAAACTGCTTTGATTGGTTGTGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CCA 90 bp TGGACGTGGGACAGAGTAACAGGATTGTTTCCACGTATGTGGACAATTAGGATACCAATTATTCTGGCCTaGAGAGGAATTACCAGGACA +
Preference number: 4 (lower is better)
Translates to: WTWDRVTGLFPRMWTIRIPIILA*RGITRT
Trigger: TGTCCTGGTAATTCCTCTCCAGGCCAGAATAATTGG...TATCCTAATTGTCCACATACGTGGAAACAATCCTGTTACTCTGTCCCACGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CCA 90 bp GATTGGACGTGGGACAGAGTAACAGGATTGTTTCCACGTATGTGGACAATTAGGACATGCCAATTATTCTaGCCTGGAGAGGAATTACCA +
Preference number: 4 (lower is better)
Translates to: DWTWDRVTGLFPRMWTIRTCQLF*PGEELP
Trigger: TGGTAATTCCTCTCCAGGCCAGAATAATTGGCATGT...CCTAATTGTCCACATACGTGGAAACAATCCTGTTACTCTGTCCCACGTCCAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS CCA 90 bp CCCTTCCTCCGCCGCCCTCTGCTGCTGGCCTGTCACTGGTCGAGGTaGTCCGGGGATTCACGCCCAGTGCTCCTCTGCTCTTCTTGCCTG +
Preference number: 5 (lower is better)
Translates to: PFLRRPLLLACHWSR*SGDSRPVLLCSSCL
Trigger: CAGGCAAGAAGAGCAGAGGAGCACTGGGCGTGAATCCCCGGACCACCTCGACCAGTGACAGGCCAGCAGCAGAGGGCGGCGGAGGAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367868.4
ENST00000527955.5
CDS CCA 90 bp GTCTGCTCAGCAGCCTTGAGGCAGCGCCAATGTCCTCCTCCACTGTaGCGTACATCACCCTCAGCCCGGGGACCCCAGAGGTCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: VCSAALRQRQCPPPL*RTSPSARGPQRSAA
Trigger: TGCAGCTGACCTCTGGGGTCCCCGGGCTGAGGGTGATGTACGCCACAGTGGAGGAGGACATTGGCGCTGCCTCAAGGCTGCTGAGCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000632571.1
CDS-3UTR CAA 90 bp TCGATGCCGCATTCTGGTTTGGAGGGTGGCACGAGGACCAACAGGCGGACACGTATGCCGCATTCTGGTTaGGAGGGTGGCACGAGGACC +
Preference number: 5 (lower is better)
Translates to: SMPHSGLEGGTRTNRRTRMPHSG*EGGTRT
Trigger: GGTCCTCGTGCCACCCTCCAAACCAGAATGCGGCAT...ACGTGTCCGCCTGTTGGTCCTCGTGCCACCCTCCAAACCAGAATGCGGCATCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
CDS-3UTR CAA 90 bp AAGAAAGATGTGTGGAGTGCAAACCCTCCACCTGGTGCCCCTCCAGGTGCTGGGACGGCCACCGTGATGTaGCAGAACTGCGTCCCCTCC +
Preference number: 5 (lower is better)
Translates to: KKDVWSANPPPGAPPGAGTATVM*QNCVPS
Trigger: GGAGGGGACGCAGTTCTGCAACATCACGGTGGCCGT...CCCAGCACCTGGAGGGGCACCAGGTGGAGGGTTTGCACTCCACACATCTTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS GCA 90 bp CAGGGCAGGGTGACACTCTTTCCCTGCGAAGCCCGAAGAACGTCCTaGGGAGTTTCCACAGAGATGGCATCGACGGTCACCCTGACTGCA +
Preference number: 5 (lower is better)
Translates to: QGRVTLFPCEARRTS*GVSTEMASTVTLTA
Trigger: TGCAGTCAGGGTGACCGTCGATGCCATCTCTGTGGAAACTCCGCAGGACGTTCTTCGGGCTTCGCAGGGAAAGAGTGTCACCCTGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS GCA 90 bp CAGGGCAGGGTGACACTCTTTCCCTGCGAAGCCCGAAGAACGTCCTaGGGAGTTTCCACAGAGATGGCATCGACGGTCACCCTGACACTC +
Preference number: 5 (lower is better)
Translates to: QGRVTLFPCEARRTS*GVSTEMASTVTLTL
Trigger: GAGTGTCAGGGTGACCGTCGATGCCATCTCTGTGGAAACTCCGCAGGACGTTCTTCGGGCTTCGCAGGGAAAGAGTGTCACCCTGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527955.5
CDS GCA 90 bp CAGGGCAGGGTGACACTCTTTCCCTGCGAAGCCCGAAGAACGTCCTaGGGAGTTTCCACAGAGATGGCATCGACGGTCACCCTGACTGTG +
Preference number: 5 (lower is better)
Translates to: QGRVTLFPCEARRTS*GVSTEMASTVTLTV
Trigger: CACAGTCAGGGTGACCGTCGATGCCATCTCTGTGGAAACTCCGCAGGACGTTCTTCGGGCTTCGCAGGGAAAGAGTGTCACCCTGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
CDS GCA 90 bp CAGGGCAGGGTGACACTCTTTCCCTGCGAAGCCCGAAGAACGTCCTaGGGAGTTTCCACAGAGATGGCATCGACGGTCACCCTGACTCAT +
Preference number: 5 (lower is better)
Translates to: QGRVTLFPCEARRTS*GVSTEMASTVTLTH
Trigger: ATGAGTCAGGGTGACCGTCGATGCCATCTCTGTGGAAACTCCGCAGGACGTTCTTCGGGCTTCGCAGGGAAAGAGTGTCACCCTGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632571.1
CDS-3UTR CAA 90 bp CGCCCCATGCTCAGCGCTGTGCTTCCAGGAGCTCCTGCCAACTACGAGGGAAGTAGCTGTACTGAGGGGTaGGTGAGCCCTCCTTTGATT +
Preference number: 5 (lower is better)
Translates to: RPMLSAVLPGAPANYEGSSCTEG*VSPPLI
Trigger: AATCAAAGGAGGGCTCACCAACCCCTCAGTACAGCT...ACTTCCCTCGTAGTTGGCAGGAGCTCCTGGAAGCACAGCGCTGAGCATGGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS GCA 90 bp GGCAGGTCAGCTGGATGTTGTTCCCAATTATGGTCTCTCCCTCGATaGCGCATTCTGGTTTGGAGGGTGGCACGAGGACCAACAGGCGGA +
Preference number: 5 (lower is better)
Translates to: GRSAGCCSQLWSLPR*RILVWRVARGPTGG
Trigger: TCCGCCTGTTGGTCCTCGTGCCACCCTCCAAACCAGAATGCGGCATCGAGGGAGAGACCATAATTGGGAACAACATCCAGCTGACCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367868.4
ENST00000527955.5
ENST00000632571.1
CDS-3UTR CAA 90 bp TCGATGCCGCATTCTGGTTTGGAGGGTGGCACGAGGACCAACAGGCGGACACGTTCGGACTGCTCAGCATaGTTGGATATGCTGACGCGA +
Preference number: 5 (lower is better)
Translates to: SMPHSGLEGGTRTNRRTRSDCSA*LDMLTR
Trigger: TCGCGTCAGCATATCCAACAATGCTGAGCAGTCCGA...ACGTGTCCGCCTGTTGGTCCTCGTGCCACCCTCCAAACCAGAATGCGGCATCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
CDS-3UTR CAA 90 bp GCGAGACAGAACACTCGTAGGTGCCGTTGTCAGCCATGGTCAGCTGATCAATGGAGGCGGACACGTGACTaGGTGTTGCCCTCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: ARQNTRRCRCQPWSADQWRRTRD*VLPSRS
Trigger: AGACCTGGAGGGCAACACCAAGTCACGTGTCCGCCT...CCATTGATCAGCTGACCATGGCTGACAACGGCACCTACGAGTGTTCTGTCTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
CDS-3UTR CAA 90 bp AAGAAAGATGTGTGGAGTGCAAACCCTCCACCTGGTGCCCCTCCAGGTGCTGGGTCCTTGTCTTCAGTGTaGTCGTCCTTCCCTCGGCAG +
Preference number: 5 (lower is better)
Translates to: KKDVWSANPPPGAPPGAGSLSSV*SSFPRQ
Trigger: CTGCCGAGGGAAGGACGACAACACTGAAGACAAGGA...CCCAGCACCTGGAGGGGCACCAGGTGGAGGGTTTGCACTCCACACATCTTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS GCA 90 bp TCGGCAGCAGCAGCAGTAGATGATGATGCCAATGATAATGAGGGCTaGAACCACGCCCACCGCGATGCCCACATACAGGGCCACGTTCAT +
Preference number: 5 (lower is better)
Translates to: SAAAAVDDDANDNEG*NHAHRDAHIQGHVH
Trigger: ATGAACGTGGCCCTGTATGTGGGCATCGCGGTGGGCGTGGTTGCAGCCCTCATTATCATTGGCATCATCATCTACTGCTGCTGCTGCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367868.4
ENST00000527955.5
CDS-3UTR CAA 90 bp TCGATGCCGCATTCTGGTTTGGAGGGTGGCACGAGGACCAACAGGCGGACACGTTTCCCCACCATGGTCTaGCTTCTTCTCTGCCCTAAA +
Preference number: 5 (lower is better)
Translates to: SMPHSGLEGGTRTNRRTRFPTMV*LLLCPK
Trigger: TTTAGGGCAGAGAAGAAGCAAGACCATGGTGGGGAA...ACGTGTCCGCCTGTTGGTCCTCGTGCCACCCTCCAAACCAGAATGCGGCATCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534512.1
CDS-3UTR CAA 90 bp TATGGTCTCTCCCTCGATGCCGCATTCTGGTTTGGAGGGTGGCACGAGGACCAAACACGTGACTTGGTGTaGCCCTCCAGGTCTGACATC +
Preference number: 5 (lower is better)
Translates to: YGLSLDAAFWFGGWHEDQTRDLV*PSRSDI
Trigger: GATGTCAGACCTGGAGGGCAACACCAAGTCACGTGT...TTGGTCCTCGTGCCACCCTCCAAACCAGAATGCGGCATCGAGGGAGAGACCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
CDS-3UTR CAA 90 bp AAGAAAGATGTGTGGAGTGCAAACCCTCCACCTGGTGCCCCTCCAGGTGCTGGGTCAGAAGACTGTGCCTaGTGGCCCATGATTGGACGT +
Preference number: 5 (lower is better)
Translates to: KKDVWSANPPPGAPPGAGSEDCA*WPMIGR
Trigger: ACGTCCAATCATGGGCCACAAGGCACAGTCTTCTGA...CCCAGCACCTGGAGGGGCACCAGGTGGAGGGTTTGCACTCCACACATCTTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CAA 90 bp TGGACGTGGGACAGAGTAACAGGATTGTTTCCACGTATGTGGACAATTAGGATAGGCTGCAGCCTGGTCTaGAGTGAGGGCCAGGCCCGC +
Preference number: 5 (lower is better)
Translates to: WTWDRVTGLFPRMWTIRIGCSLV*SEGQAR
Trigger: GCGGGCCTGGCCCTCACTCAAGACCAGGCTGCAGCC...TATCCTAATTGTCCACATACGTGGAAACAATCCTGTTACTCTGTCCCACGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS TCA 90 bp ACCCTGACTCATAATTTTCTTCATGGCAGGTCTGCTCAGCAGCCTTaGGGCAGCGCCAATGTCCTCCTCCACTGTGGCGTACATCACCCT +
Preference number: 5 (lower is better)
Translates to: TLTHNFLHGRSAQQP*GSANVLLHCGVHHP
Trigger: AGGGTGATGTACGCCACAGTGGAGGAGGACATTGGCGCTGCCTCAAGGCTGCTGAGCAGACCTGCCATGAAGAAAATTATGAGTCAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000632571.1
CDS CCA 90 bp AGCCCTCCTTTGATTGGCAGGTCAGCTGGATGTTGTTCCCAATTATaGTCTCTCCCTCGATGCCGCATTCTGGTTTGGAGGGTGGCACGA +
Preference number: 5 (lower is better)
Translates to: SPPLIGRSAGCCSQL*SLPRCRILVWRVAR
Trigger: TCGTGCCACCCTCCAAACCAGAATGCGGCATCGAGGGAGAGACCATAATTGGGAACAACATCCAGCTGACCTGCCAATCAAAGGAGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367868.4
ENST00000527955.5
ENST00000632571.1
CDS CCA 90 bp CCTCCTCATTGCTGGAGGTACAGATGTAGTAACCCGATGTGTCTGTaGAGATATTCTTCAGGGAGACAGGCTGACCTGAGGCTGGCTGGG +
Preference number: 5 (lower is better)
Translates to: PPHCWRYRCSNPMCL*RYSSGRQADLRLAG
Trigger: CCCAGCCAGCCTCAGGTCAGCCTGTCTCCCTGAAGAATATCTCCACAGACACATCGGGTTACTACATCTGTACCTCCAGCAATGAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367868.4
ENST00000527955.5
CDS-3UTR CAA 90 bp AGGAGCTGGCGCTCTAATACAGTGAGAGCACTCGCTCAGAAGACTGTGCCTTGTACACGTGACTTGGTGTaGCCCTCCAGGTCTGACATC +
Preference number: 5 (lower is better)
Translates to: RSWRSNTVRALAQKTVPCTRDLV*PSRSDI
Trigger: GATGTCAGACCTGGAGGGCAACACCAAGTCACGTGT...ACAAGGCACAGTCTTCTGAGCGAGTGCTCTCACTGTATTAGAGCGCCAGCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CAA 90 bp GCCCTAACGCTGCCTGAGCTCTCAAGAGTAGAAGAAATGCTCGACAAACAGAAGAGGCGGACACGTGACTaGGTGTTGCCCTCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: ALTLPELSRVEEMLDKQKRRTRD*VLPSRS
Trigger: AGACCTGGAGGGCAACACCAAGTCACGTGTCCGCCT...CTTCTGTTTGTCGAGCATTTCTTCTACTCTTGAGAGCTCAGGCAGCGTTAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CAA 90 bp ACCCCATGTGGGTTGAGGAGACATGCCAATTATTCTGGCCTGGAGAGGAATTACATGCCGCATTCTGGTTaGGAGGGTGGCACGAGGACC +
Preference number: 5 (lower is better)
Translates to: TPCGLRRHANYSGLERNYMPHSG*EGGTRT
Trigger: GGTCCTCGTGCCACCCTCCAAACCAGAATGCGGCAT...GTAATTCCTCTCCAGGCCAGAATAATTGGCATGTCTCCTCAACCCACATGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CAA 90 bp CGGGATGCAGGAACAACCAGGAACCCCATGTGGGTTGAGGAGACATGCCAATTAGGCCTTGCATCCTCCTaGTCTTCAGTGTTGTCGTCC +
Preference number: 5 (lower is better)
Translates to: RDAGTTRNPMWVEETCQLGLASS*SSVLSS
Trigger: GGACGACAACACTGAAGACAAGGAGGATGCAAGGCC...TAATTGGCATGTCTCCTCAACCCACATGGGGTTCCTGGTTGTTCCTGCATCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CAA 90 bp GGAACAACCAGGAACCCCATGTGGGTTGAGGAGACATGCCAATTATTCTGGCCTTTGGTGAGCCCTCCTTaGATTGGCAGGTCAGCTGGA +
Preference number: 5 (lower is better)
Translates to: GTTRNPMWVEETCQLFWPLVSPP*IGRSAG
Trigger: TCCAGCTGACCTGCCAATCAAAGGAGGGCTCACCAA...AGGCCAGAATAATTGGCATGTCTCCTCAACCCACATGGGGTTCCTGGTTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CAA 90 bp CTCAGAAGACTGTGCCTTGTGGCCCATGATTGGACGTGGGACAGAGTAACAGGATTCCCCACCATGGTCTaGCTTCTTCTCTGCCCTAAA +
Preference number: 5 (lower is better)
Translates to: LRRLCLVAHDWTWDRVTGFPTMV*LLLCPK
Trigger: TTTAGGGCAGAGAAGAAGCAAGACCATGGTGGGGAA...TCCTGTTACTCTGTCCCACGTCCAATCATGGGCCACAAGGCACAGTCTTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CAA 90 bp TGTGGGTTGAGGAGACATGCCAATTATTCTGGCCTGGAGAGGAATTACCAGGACCCTTCCCAGGAGGGTTaGGAACATACTGGCAGCTAC +
Preference number: 5 (lower is better)
Translates to: CGLRRHANYSGLERNYQDPSQEG*EHTGSY
Trigger: GTAGCTGCCAGTATGTTCCAAACCCTCCTGGGAAGG...GTCCTGGTAATTCCTCTCCAGGCCAGAATAATTGGCATGTCTCCTCAACCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CAA 90 bp CGGGATGCAGGAACAACCAGGAACCCCATGTGGGTTGAGGAGACATGCCAATTAGGGACAGGTACGATATaGACAGGCAGAGATGGAAAG +
Preference number: 5 (lower is better)
Translates to: RDAGTTRNPMWVEETCQLGTGTI*TGRDGK
Trigger: CTTTCCATCTCTGCCTGTCAATATCGTACCTGTCCC...TAATTGGCATGTCTCCTCAACCCACATGGGGTTCCTGGTTGTTCCTGCATCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CAA 90 bp CGGGATGCAGGAACAACCAGGAACCCCATGTGGGTTGAGGAGACATGCCAATTAAGAAATCCTTGTGATTaGAGATGGGCCTGGAGGGAC +
Preference number: 5 (lower is better)
Translates to: RDAGTTRNPMWVEETCQLRNPCD*RWAWRD
Trigger: GTCCCTCCAGGCCCATCTCAAATCACAAGGATTTCT...TAATTGGCATGTCTCCTCAACCCACATGGGGTTCCTGGTTGTTCCTGCATCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CAA 90 bp GCAGTTTCCCCAATTAAGCTTAAGTGCCCACTAGGATGGGCGCCAGCTACTAGGAATAGTAAACTGCAGTaGGGTGAGACCAGCCACTGG +
Preference number: 5 (lower is better)
Translates to: AVSPIKLKCPLGWAPATRNSKLQ*GETSHW
Trigger: CCAGTGGCTGGTCTCACCCAACTGCAGTTTACTATT...CCTAGTAGCTGGCGCCCATCCTAGTGGGCACTTAAGCTTAATTGGGGAAACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CAA 90 bp ACCCCATGTGGGTTGAGGAGACATGCCAATTATTCTGGCCTGGAGAGGAATTACTCGGACTGCTCAGCATaGTTGGATATGCTGACGCGA +
Preference number: 5 (lower is better)
Translates to: TPCGLRRHANYSGLERNYSDCSA*LDMLTR
Trigger: TCGCGTCAGCATATCCAACAATGCTGAGCAGTCCGA...GTAATTCCTCTCCAGGCCAGAATAATTGGCATGTCTCCTCAACCCACATGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CAA 90 bp CGGGATGCAGGAACAACCAGGAACCCCATGTGGGTTGAGGAGACATGCCAATTAAATGAATACGTGGGTTaGGGTGGGAATCATCCCTGT +
Preference number: 5 (lower is better)
Translates to: RDAGTTRNPMWVEETCQLNEYVG*GGNHPC
Trigger: ACAGGGATGATTCCCACCCAAACCCACGTATTCATT...TAATTGGCATGTCTCCTCAACCCACATGGGGTTCCTGGTTGTTCCTGCATCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CAA 90 bp TGGACGTGGGACAGAGTAACAGGATTGTTTCCACGTATGTGGACAATTAGGATACTTCCCGGTTCGGCCTaGCATCCTCCTTGTCTTCAG +
Preference number: 5 (lower is better)
Translates to: WTWDRVTGLFPRMWTIRILPGSA*HPPCLQ
Trigger: CTGAAGACAAGGAGGATGCAAGGCCGAACCGGGAAG...TATCCTAATTGTCCACATACGTGGAAACAATCCTGTTACTCTGTCCCACGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CAA 90 bp GATTGGACGTGGGACAGAGTAACAGGATTGTTTCCACGTATGTGGACAATTAGGGCTCCTCTGCTCTTCTaGCCTGTAGTCATCCTCCTC +
Preference number: 5 (lower is better)
Translates to: DWTWDRVTGLFPRMWTIRAPLLF*PVVILL
Trigger: GAGGAGGATGACTACAGGCAAGAAGAGCAGAGGAGC...CCTAATTGTCCACATACGTGGAAACAATCCTGTTACTCTGTCCCACGTCCAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CAA 90 bp AGGAGCTGGCGCTCTAATACAGTGAGAGCACTCGCTCAGAAGACTGTGCCTTGTGACAGAGTAACAGGATaGTTTCCACGTATGTGGACA +
Preference number: 5 (lower is better)
Translates to: RSWRSNTVRALAQKTVPCDRVTG*FPRMWT
Trigger: TGTCCACATACGTGGAAACAATCCTGTTACTCTGTC...ACAAGGCACAGTCTTCTGAGCGAGTGCTCTCACTGTATTAGAGCGCCAGCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CAA 90 bp ACCCCATGTGGGTTGAGGAGACATGCCAATTATTCTGGCCTGGAGAGGAATTACGGAACCCCATGTGGGTaGAGGAGACATGCCAATTAT +
Preference number: 5 (lower is better)
Translates to: TPCGLRRHANYSGLERNYGTPCG*RRHANY
Trigger: ATAATTGGCATGTCTCCTCAACCCACATGGGGTTCC...GTAATTCCTCTCCAGGCCAGAATAATTGGCATGTCTCCTCAACCCACATGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CAA 90 bp ACCCCATGTGGGTTGAGGAGACATGCCAATTATTCTGGCCTGGAGAGGAATTACGAGGAGCTTATCCCATaGAATAAGTCCCTCTCGACT +
Preference number: 5 (lower is better)
Translates to: TPCGLRRHANYSGLERNYEELIP*NKSLST
Trigger: AGTCGAGAGGGACTTATTCAATGGGATAAGCTCCTC...GTAATTCCTCTCCAGGCCAGAATAATTGGCATGTCTCCTCAACCCACATGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CAA 90 bp GGTCAGCTGATCAATGGTGATGGAGGCATCGGACTGCTCAGCATTGTTGGATATGAGGAGCTTATCCCATaGAATAAGTCCCTCTCGACT +
Preference number: 5 (lower is better)
Translates to: GQLINGDGGIGLLSIVGYEELIP*NKSLST
Trigger: AGTCGAGAGGGACTTATTCAATGGGATAAGCTCCTC...ATATCCAACAATGCTGAGCAGTCCGATGCCTCCATCACCATTGATCAGCTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534512.1
CDS-3UTR CAA 90 bp GATTGGACGTGGGACAGAGTAACAGGATTGTTTCCACGTATGTGGACAATTAGGGACTGCTCAGCATTGTaGGATATGCTGACGCGATTC +
Preference number: 5 (lower is better)
Translates to: DWTWDRVTGLFPRMWTIRDCSAL*DMLTRF
Trigger: GAATCGCGTCAGCATATCCAACAATGCTGAGCAGTC...CCTAATTGTCCACATACGTGGAAACAATCCTGTTACTCTGTCCCACGTCCAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CAA 90 bp GGAACAACCAGGAACCCCATGTGGGTTGAGGAGACATGCCAATTATTCTGGCCTTGCAAGCAAGCTCCCTaGTGTGTGTTCACTTTAAAT +
Preference number: 5 (lower is better)
Translates to: GTTRNPMWVEETCQLFWPCKQAP*CVFTLN
Trigger: ATTTAAAGTGAACACACACAAGGGAGCTTGCTTGCA...AGGCCAGAATAATTGGCATGTCTCCTCAACCCACATGGGGTTCCTGGTTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS-3UTR CAA 90 bp TGGACGTGGGACAGAGTAACAGGATTGTTTCCACGTATGTGGACAATTAGGATACAGGTCAGCTGGATGTaGTTCCCAATTATGGTCTCT +
Preference number: 5 (lower is better)
Translates to: WTWDRVTGLFPRMWTIRIQVSWM*FPIMVS
Trigger: AGAGACCATAATTGGGAACAACATCCAGCTGACCTG...TATCCTAATTGTCCACATACGTGGAAACAATCCTGTTACTCTGTCCCACGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367868.4
CDS CCA 72 bp CGCCGCCCTCTGCTGCTGGCCTGTCACTGGTCGAGGTaGTCCGGGGATTCACGCCCAGTGCTCCTCTGCTCT +
Preference number: 6 (lower is better)
Translates to: RRPLLLACHWSR*SGDSRPVLLCS
Trigger: AGAGCAGAGGAGCACTGGGCGTGAATCCCCGGACCACCTCGACCAGTGACAGGCCAGCAGCAGAGGGCGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367868.4
ENST00000527955.5
CDS GCA 72 bp GTGACACTCTTTCCCTGCGAAGCCCGAAGAACGTCCTaGGGAGTTTCCACAGAGATGGCATCGACGGTCACC +
Preference number: 6 (lower is better)
Translates to: VTLFPCEARRTS*GVSTEMASTVT
Trigger: GGTGACCGTCGATGCCATCTCTGTGGAAACTCCGCAGGACGTTCTTCGGGCTTCGCAGGGAAAGAGTGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367868.4
ENST00000527955.5
ENST00000534512.1
ENST00000632571.1
CDS GCA 72 bp TACATCACCCTCAGCCCGGGGACCCCAGAGGTCAGCTaGACATTTCCCTCGTGGGTGTTTGCAGCTGAAGAA +
Preference number: 6 (lower is better)
Translates to: YITLSPGTPEVS*TFPSWVFAAEE
Trigger: TTCTTCAGCTGCAAACACCCACGAGGGAAATGTGCAGCTGACCTCTGGGGTCCCCGGGCTGAGGGTGATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000632571.1
CDS CCA 72 bp GTTCCCAATTATGGTCTCTCCCTCGATGCCGCATTCTaGTTTGGAGGGTGGCACGAGGACCAACAGGCGGAC +
Preference number: 6 (lower is better)
Translates to: VPNYGLSLDAAF*FGGWHEDQQAD
Trigger: GTCCGCCTGTTGGTCCTCGTGCCACCCTCCAAACCAGAATGCGGCATCGAGGGAGAGACCATAATTGGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367868.4
ENST00000527955.5
ENST00000632571.1
CDS CAA 72 bp ACGTTCATGGAGGGAGATCTGACGGCCACCGTGATGTaGCAGAACTGCGTCCCCTCCTCATTGCTGGAGGTA +
Preference number: 6 (lower is better)
Translates to: TFMEGDLTATVM*QNCVPSSLLEV
Trigger: TACCTCCAGCAATGAGGAGGGGACGCAGTTCTGCAACATCACGGTGGCCGTCAGATCTCCCTCCATGAACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367868.4
ENST00000527955.5
CDS TCA 72 bp GCGGAGTTTCCACAGAGATGGCATCGACGGTCACCCTaGCTGTGGATTCTGAGATCGTGGGGCAATCTGAGA +
Preference number: 6 (lower is better)
Translates to: AEFPQRWHRRSP*LWILRSWGNLR
Trigger: TCTCAGATTGCCCCACGATCTCAGAATCCACAGTCAGGGTGACCGTCGATGCCATCTCTGTGGAAACTCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534512.1
CDS GCA 72 bp GCTGGATGTTGTTCCCAATTATGGTCTCTCCCTCGATaGCGCATTCTGGTTTGGAGGGTGGCACGAGGACCA +
Preference number: 6 (lower is better)
Translates to: AGCCSQLWSLPR*RILVWRVARGP
Trigger: TGGTCCTCGTGCCACCCTCCAAACCAGAATGCGGCATCGAGGGAGAGACCATAATTGGGAACAACATCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367868.4
ENST00000527955.5
ENST00000632571.1
CDS CAA 72 bp CCCCAGAGGTCAGCTGCACATTTCCCTCGTGGGTGTTaGCAGCTGAAGAAAAGGCCCAGGCTAAGACGAAAG +
Preference number: 6 (lower is better)
Translates to: PQRSAAHFPRGC*QLKKRPRLRRK
Trigger: CTTTCGTCTTAGCCTGGGCCTTTTCTTCAGCTGCAAACACCCACGAGGGAAATGTGCAGCTGACCTCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000632571.1
CDS TCA 72 bp CATAATTTTCTTCATGGCAGGTCTGCTCAGCAGCCTTaGGGCAGCGCCAATGTCCTCCTCCACTGTGGCGTA +
Preference number: 6 (lower is better)
Translates to: HNFLHGRSAQQP*GSANVLLHCGV
Trigger: TACGCCACAGTGGAGGAGGACATTGGCGCTGCCTCAAGGCTGCTGAGCAGACCTGCCATGAAGAAAATTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000632571.1
CDS CCA 72 bp GGGGTTGGTGAGCCCTCCTTTGATTGGCAGGTCAGCTaGATGTTGTTCCCAATTATGGTCTCTCCCTCGATG +
Preference number: 6 (lower is better)
Translates to: GVGEPSFDWQVS*MLFPIMVSPSM
Trigger: CATCGAGGGAGAGACCATAATTGGGAACAACATCCAGCTGACCTGCCAATCAAAGGAGGGCTCACCAACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367868.4
ENST00000527955.5
ENST00000632571.1
CDS CAA 72 bp GGTGAGCCCTCCTTTGATTGGCAGGTCAGCTGGATGTaGTTCCCAATTATGGTCTCTCCCTCGATGCCGCAT +
Preference number: 6 (lower is better)
Translates to: GEPSFDWQVSWM*FPIMVSPSMPH
Trigger: ATGCGGCATCGAGGGAGAGACCATAATTGGGAACAACATCCAGCTGACCTGCCAATCAAAGGAGGGCTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367868.4
ENST00000527955.5
ENST00000632571.1
CDS CAA 72 bp TCAGGATGTTGTACCTCTTCCAGCTGTACTGAGGGGTaGGTGAGCCCTCCTTTGATTGGCAGGTCAGCTGGA +
Preference number: 6 (lower is better)
Translates to: SGCCTSSSCTEG*VSPPLIGRSAG
Trigger: TCCAGCTGACCTGCCAATCAAAGGAGGGCTCACCAACCCCTCAGTACAGCTGGAAGAGGTACAACATCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367868.4
ENST00000527955.5
CDS CAA 90 bp GCTCCTGATTCAGGATGTTGTACCTCTTCCAGCTGTACTGAGGGGTaGGTGAGCCCTCCTTTGATTGGCAGGTCAGCTGGATGTTGTTCC +
Preference number: 6 (lower is better)
Translates to: APDSGCCTSSSCTEG*VSPPLIGRSAGCCS
Trigger: GGAACAACATCCAGCTGACCTGCCAATCAAAGGAGGGCTCACCAACCCCTCAGTACAGCTGGAAGAGGTACAACATCCTGAATCAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367868.4
ENST00000527955.5
CDS CAA 90 bp CCAGATGACCACCCTTTCCGTATGAGTGAGGAGGAGCTTATCCCATaGAATAAGTCCCTCTCGACTGGAGGTGGAAGTGTGGTAGGTGCA +
Preference number: 6 (lower is better)
Translates to: PDDHPFRMSEEELIP*NKSLSTGGGSVVGA
Trigger: TGCACCTACCACACTTCCACCTCCAGTCGAGAGGGACTTATTCAATGGGATAAGCTCCTCCTCACTCATACGGAAAGGGTGGTCATCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367868.4
ENST00000527955.5
ENST00000534512.1
ENST00000632571.1
CDS CCA 72 bp AGAGTGTCCACAACACAGGCCACATCTTCCCCACCATaGTCTTGCTTCTTCTCTGCCCTAAACCTAACCTGT +
Preference number: 6 (lower is better)
Translates to: RVSTTQATSSPP*SCFFSALNLTC
Trigger: ACAGGTTAGGTTTAGGGCAGAGAAGAAGCAAGACCATGGTGGGGAAGATGTGGCCTGTGTTGTGGACACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367868.4
ENST00000534512.1
CDS CCA 72 bp TTGATTGGCAGGTCAGCTGGATGTTGTTCCCAATTATaGTCTCTCCCTCGATGCCGCATTCTGGTTTGGAGG +
Preference number: 6 (lower is better)
Translates to: LIGRSAGCCSQL*SLPRCRILVWR
Trigger: CCTCCAAACCAGAATGCGGCATCGAGGGAGAGACCATAATTGGGAACAACATCCAGCTGACCTGCCAATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367868.4
ENST00000527955.5
ENST00000632571.1
CDS CCA 72 bp TGCTGGAGGTACAGATGTAGTAACCCGATGTGTCTGTaGAGATATTCTTCAGGGAGACAGGCTGACCTGAGG +
Preference number: 6 (lower is better)
Translates to: CWRYRCSNPMCL*RYSSGRQADLR
Trigger: CCTCAGGTCAGCCTGTCTCCCTGAAGAATATCTCCACAGACACATCGGGTTACTACATCTGTACCTCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367868.4
ENST00000527955.5
CDS CAA 72 bp CACCCTTTCCGTATGAGTGAGGAGGAGCTTATCCCATaGAATAAGTCCCTCTCGACTGGAGGTGGAAGTGTG +
Preference number: 6 (lower is better)
Translates to: HPFRMSEEELIP*NKSLSTGGGSV
Trigger: CACACTTCCACCTCCAGTCGAGAGGGACTTATTCAATGGGATAAGCTCCTCCTCACTCATACGGAAAGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367868.4
ENST00000527955.5
ENST00000534512.1
ENST00000632571.1