RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000169347

Ensembl transcript IDs: ENST00000302555.10, ENST00000341642.9, ENST00000381360.9, ENST00000381362.8, ENST00000572347.5, ENST00000572478.5, ENST00000573897.5, ENST00000574982.1, ENST00000575449.1, ENST00000575582.5, ENST00000575730.1

Found 548 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCACATTGGAACGTCTCCTCCAAGCAGATACACAGGCTCGGCACCTaGTGGTCCACCTTGGTTCCTGATGTGTCTCTGAGGCCAACTTTG +
Preference number: 1 (lower is better)
Translates to: AHWNVSSKQIHRLGT*WSTLVPDVSLRPTL
Trigger: CAAAGTTGGCCTCAGAGACACATCAGGAACCAAGGTGGACCAGCAGGTGCCGAGCCTGTGTATCTGCTTGGAGGAGACGTTCCAATGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR CCA 90 bp CATTGGAACGTCTCCTCCAAGCAGATACACAGGCTCGGCACCTGCTaGTCCACCTTGGTTCCTGATGTGTCTCTGAGGCCAACTTTGCGA +
Preference number: 1 (lower is better)
Translates to: HWNVSSKQIHRLGTC*STLVPDVSLRPTLR
Trigger: TCGCAAAGTTGGCCTCAGAGACACATCAGGAACCAAGGTGGACCAGCAGGTGCCGAGCCTGTGTATCTGCTTGGAGGAGACGTTCCAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR CCA 90 bp CGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTaGAGCCACAGAGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCAT +
Preference number: 1 (lower is better)
Translates to: RFPEVKNMHHTSGKG*SHRGHLASLLSRSH
Trigger: ATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
3UTR GCA 90 bp CACAAGGGTCAGTTTCTTCAATTCATGAGCAGTCAGAACAGGAGATaGTTAGGAAGGAATCGTGGCTGGTGCCTCTTCTCCATGCTCATC +
Preference number: 1 (lower is better)
Translates to: HKGQFLQFMSSQNRR*LGRNRGWCLFSMLI
Trigger: GATGAGCATGGAGAAGAGGCACCAGCCACGATTCCTTCCTAAGCATCTCCTGTTCTGACTGCTCATGAATTGAAGAAACTGACCCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
3UTR GCA 90 bp TCTCCTAGGCTTTGCAGTTTCATTCCCATAGCAGGACTGGTGCATTaGTTCTGTTGGGACTTCTTGCTTAATCCTTCAGAGCAAGCACAG +
Preference number: 1 (lower is better)
Translates to: SPRLCSFIPIAGLVH*FCWDFLLNPSEQAQ
Trigger: CTGTGCTTGCTCTGAAGGATTAAGCAAGAAGTCCCAACAGAAGCAATGCACCAGTCCTGCTATGGGAATGAAACTGCAAAGCCTAGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR CCA 90 bp AGCTTGGCCTTGATTCTATTAATACCAAGCCTGTGTGAATTGGAGTaGAAAGCAGAAGTGCTGAAGGGAGCCATTGCCAGAGGGAAGAAC +
Preference number: 1 (lower is better)
Translates to: SLALILLIPSLCELE*KAEVLKGAIARGKN
Trigger: GTTCTTCCCTCTGGCAATGGCTCCCTTCAGCACTTCTGCTTTCCACTCCAATTCACACAGGCTTGGTATTAATAGAATCAAGGCCAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
3UTR TCA 90 bp GACTTCTTGCTTAATCCTTCAGAGCAAGCACAGCACTGTTTACAGTaGGAGGTACTCCCTTGGGTGATGGAGTTTCTGCATCAAATTAAG +
Preference number: 1 (lower is better)
Translates to: DFLLNPSEQAQHCLQ*EVLPWVMEFLHQIK
Trigger: CTTAATTTGATGCAGAAACTCCATCACCCAAGGGAGTACCTCTCACTGTAAACAGTGCTGTGCTTGCTCTGAAGGATTAAGCAAGAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR GCA 90 bp TTAACTCCCTTTTTGCCTGAGAAATTGTGGTGGGTTTCTGTTTCTTaGAACTACACCATCTCTGAACAAGGCAGCACATTGGAACGTCTC +
Preference number: 1 (lower is better)
Translates to: LTPFLPEKLWWVSVS*NYTISEQGSTLERL
Trigger: GAGACGTTCCAATGTGCTGCCTTGTTCAGAGATGGTGTAGTTGCAAGAAACAGAAACCCACCACAATTTCTCAGGCAAAAAGGGAGTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR-3UTR TCA 90 bp ACCCAGGCCTCCCAGCAAACATTTGTCCACCTTCACCTTGATCTCCCTGGGCCCAGCCCCAGGTGCTGTTaGGGGCAAGGCACTCCTCCT +
Preference number: 2 (lower is better)
Translates to: TQASQQTFVHLHLDLPGPSPRCC*GQGTPP
Trigger: AGGAGGAGTGCCTTGCCCTCAACAGCACCTGGGGCT...GGGCCCAGGGAGATCAAGGTGAAGGTGGACAAATGTTTGCTGGGAGGCCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574982.1
3UTR CAA 90 bp TCAGAACTATTGAGGTCCTGTCTGCAGAAACAGCCCCAGGTGCTGTaGAGGGCAAGGCACTCCTCCTCGGGGCGGCAGGCCTTCTCACAC +
Preference number: 2 (lower is better)
Translates to: SELLRSCLQKQPQVL*RARHSSSGRQAFSH
Trigger: GTGTGAGAAGGCCTGCCGCCCCGAGGAGGAGTGCCTTGCCCTCAACAGCACCTGGGGCTGTTTCTGCAGACAGGACCTCAATAGTTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574982.1
3UTR CAA 90 bp GTCTCCTCCAAGCAGATACACAGGCTCGGCACCTGCTGGTCCACCTaGGTTCCTGATGTGTCTCTGAGGCCAACTTTGCGAGGCCTTATC +
Preference number: 2 (lower is better)
Translates to: VSSKQIHRLGTCWST*VPDVSLRPTLRGLI
Trigger: GATAAGGCCTCGCAAAGTTGGCCTCAGAGACACATCAGGAACCAAGGTGGACCAGCAGGTGCCGAGCCTGTGTATCTGCTTGGAGGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR-3UTR CCA 90 bp TTTTGGCTTGCCAGGCCCCACTCCCGGAGCTTGTGCAGCCTGGATGTATCTCTTATGTCTGTGGTATGGTaGGGGATAGGGGAGCTATGG +
Preference number: 2 (lower is better)
Translates to: FWLARPHSRSLCSLDVSLMSVVW*GIGELW
Trigger: CCATAGCTCCCCTATCCCCCACCATACCACAGACAT...AAGAGATACATCCAGGCTGCACAAGCTCCGGGAGTGGGGCCTGGCAAGCCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR CAA 90 bp ACCTGCTGGTCCACCTTGGTTCCTGATGTGTCTCTGAGGCCAACTTaGCGAGGCCTTATCTGTAGCTGTGGGAAGGGCGTAAGTCAGTGT +
Preference number: 2 (lower is better)
Translates to: TCWSTLVPDVSLRPT*RGLICSCGKGVSQC
Trigger: ACACTGACTTACGCCCTTCCCACAGCTACAGATAAGGCCTCGCAAAGTTGGCCTCAGAGACACATCAGGAACCAAGGTGGACCAGCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR-3UTR TCA 90 bp GAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGGCACGCAACCTCCACCCCCTaGGTTCGAGCAATTCTCCTG +
Preference number: 2 (lower is better)
Translates to: EVKNMHHTSGKGWSHRGHATSTP*VRAILL
Trigger: CAGGAGAATTGCTCGAACTCAGGGGGTGGAGGTTGC...GTGCCCTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
3UTR-3UTR TCA 90 bp AGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCGCAACCTCCACCCCCTaGGTTCGAGCAATTCTCCTG +
Preference number: 2 (lower is better)
Translates to: RAPSKLAFKVPSTNEKGSATSTP*VRAILL
Trigger: CAGGAGAATTGCTCGAACTCAGGGGGTGGAGGTTGC...GCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
3UTR-3UTR TCA 90 bp ACCGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCGCAACCTCCACCCCCTaGGTTCGAGCAATTCTCCTG +
Preference number: 2 (lower is better)
Translates to: TASLKLKTCTTLPVKAGAATSTP*VRAILL
Trigger: CAGGAGAATTGCTCGAACTCAGGGGGTGGAGGTTGC...GGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
3UTR-3UTR TCA 90 bp ACGTCTCCTCCAAGCAGATACACAGGCTCGGCACCTGCTGGTCCACCTTGGTTCAGGTACTCCCTTGGGTaGTGGAGTTTCTGCATCAAA +
Preference number: 2 (lower is better)
Translates to: TSPPSRYTGSAPAGPPWFRYSLG*WSFCIK
Trigger: TTTGATGCAGAAACTCCATCACCCAAGGGAGTACCT...GAACCAAGGTGGACCAGCAGGTGCCGAGCCTGTGTATCTGCTTGGAGGAGACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR-3UTR TCA 90 bp CACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGGAAAGCAGAAGTGCTaGAGGGAGCCATTGCCAGAG +
Preference number: 2 (lower is better)
Translates to: HLASLLSRSHQQMRRAAEGKQKC*REPLPE
Trigger: CTCTGGCAATGGCTCCCTTCAGCACTTCTGCTTTCC...CTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
3UTR-3UTR TCA 90 bp ACATTGGAACGTCTCCTCCAAGCAGATACACAGGCTCGGCACCTGCTGGTCCACATGCCTGTGTATGTGTaGTGCCCTATTTGCTGCATC +
Preference number: 2 (lower is better)
Translates to: TLERLLQADTQARHLLVHMPVYV*CPICCI
Trigger: GATGCAGCAAATAGGGCATCACACATACACAGGCAT...GTGGACCAGCAGGTGCCGAGCCTGTGTATCTGCTTGGAGGAGACGTTCCAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR-3UTR TCA 90 bp TTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGCAACCTCCACCCCCTaGGTTCGAGCAATTCTCCTG +
Preference number: 2 (lower is better)
Translates to: FPEVKNMHHTSGKGWSHRATSTP*VRAILL
Trigger: CAGGAGAATTGCTCGAACTCAGGGGGTGGAGGTTGC...TCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
3UTR-3UTR TCA 90 bp TCTCCATGCTCATCCCATACCCCAGTGACAGGATACCGCTTCCCTGAAGTTAAAGGTCCCATCAACAAATaGGAAGGGCAGCCGAGGACA +
Preference number: 2 (lower is better)
Translates to: SPCSSHTPVTGYRFPEVKGPINK*EGQPRT
Trigger: TGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACC...TTTAACTTCAGGGAAGCGGTATCCTGTCACTGGGGTATGGGATGAGCATGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
3UTR-3UTR TCA 90 bp TCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGGTCCCATCAACAAATaGGAAGGGCAGCCGAGGACA +
Preference number: 2 (lower is better)
Translates to: SLKLKTCTTLPVKAGATEGPINK*EGQPRT
Trigger: TGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACC...CTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
3UTR-3UTR CCA 90 bp CGGAGCTTGTGCAGCCTGGATGTATCTCTTGCACTGGAACTTTGTGCTCTTATGGGAAGGAATCGTGGCTaGTGCCTCTTCTCCATGCTC +
Preference number: 2 (lower is better)
Translates to: RSLCSLDVSLALELCALMGRNRG*CLFSML
Trigger: GAGCATGGAGAAGAGGCACCAGCCACGATTCCTTCC...CATAAGAGCACAAAGTTCCAGTGCAAGAGATACATCCAGGCTGCACAAGCTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR-3UTR CCA 90 bp ACGTCTCCTCCAAGCAGATACACAGGCTCGGCACCTGCTGGTCCACCTTGGTTCGTGCATTGCTTCTGTTaGGACTTCTTGCTTAATCCT +
Preference number: 2 (lower is better)
Translates to: TSPPSRYTGSAPAGPPWFVHCFC*DFLLNP
Trigger: AGGATTAAGCAAGAAGTCCCAACAGAAGCAATGCAC...GAACCAAGGTGGACCAGCAGGTGCCGAGCCTGTGTATCTGCTTGGAGGAGACGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR-3UTR TCA 90 bp TCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGGGAAAGCAGAAGTGCTaGAGGGAGCCATTGCCAGAG +
Preference number: 2 (lower is better)
Translates to: STNEKGSRGQIDRNPTMLGKQKC*REPLPE
Trigger: CTCTGGCAATGGCTCCCTTCAGCACTTCTGCTTTCC...CAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
3UTR-3UTR TCA 90 bp GAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCTTTTCTTTGGAAAGCAGAAGTGCTaGAGGGAGCCATTGCCAGAG +
Preference number: 2 (lower is better)
Translates to: EKGSRGQIDRNPTMLLFFGKQKC*REPLPE
Trigger: CTCTGGCAATGGCTCCCTTCAGCACTTCTGCTTTCC...AAAGAAAAGCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
3UTR-3UTR TCA 90 bp GAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGGCACCAGCCGAGGACAGATTaGCAGAAACCCCACTATGTT +
Preference number: 2 (lower is better)
Translates to: EVKNMHHTSGKGWSHRGHQPRTD*QKPHYV
Trigger: AACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTG...GTGCCCTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
3UTR-3UTR TCA 90 bp TTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGTCCCATCAACAAATaGGAAGGGCAGCCGAGGACA +
Preference number: 2 (lower is better)
Translates to: FPEVKNMHHTSGKGWSHRGPINK*EGQPRT
Trigger: TGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACC...TCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
3UTR-3UTR CCA 90 bp ATGGAGTTTCTGCATCAAATTAAGTCATTCCTCCAGCATCTAGGTCCCAAGGATGGCCTCCCGAGTAGCTaGGATTACAGGCGCCTGCCA +
Preference number: 2 (lower is better)
Translates to: MEFLHQIKSFLQHLGPKDGLPSS*DYRRLP
Trigger: TGGCAGGCGCCTGTAATCCCAGCTACTCGGGAGGCC...ATCCTTGGGACCTAGATGCTGGAGGAATGACTTAATTTGATGCAGAAACTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR-3UTR CCA 90 bp CAAACTTTGGTTTCTTTTGGCTTGCCAGGCCCCACTCCCGGAGCTTGTGCAGCCCCTGAGAAATTGTGGTaGGTTTCTGTTTCTTGCAAC +
Preference number: 2 (lower is better)
Translates to: QTLVSFGLPGPTPGACAAPEKLW*VSVSCN
Trigger: GTTGCAAGAAACAGAAACCCACCACAATTTCTCAGG...GGCTGCACAAGCTCCGGGAGTGGGGCCTGGCAAGCCAAAAGAAACCAAAGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR-3UTR TCA 90 bp TCTCCATGCTCATCCCATACCCCAGTGACAGGATACCGCTTCCCTGAAGTTAAACAGCCGAGGACAGATTaGCAGAAACCCCACTATGTT +
Preference number: 2 (lower is better)
Translates to: SPCSSHTPVTGYRFPEVKQPRTD*QKPHYV
Trigger: AACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTG...TTTAACTTCAGGGAAGCGGTATCCTGTCACTGGGGTATGGGATGAGCATGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
3UTR-3UTR GCA 90 bp CAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCGCTGAAGGGAGCCATTaGCAGAGGGAAGAACACAAA +
Preference number: 2 (lower is better)
Translates to: QQMRRAAEDRLTETPLCCAEGSH*QREEHK
Trigger: TTTGTGTTCTTCCCTCTGGCAATGGCTCCCTTCAGC...GCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
3UTR-3UTR GCA 90 bp AGAGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCTGAAGGGAGCCATTaGCAGAGGGAAGAACACAAA +
Preference number: 2 (lower is better)
Translates to: RGHLASLLSRSHQQMRRAAEGSH*QREEHK
Trigger: TTTGTGTTCTTCCCTCTGGCAATGGCTCCCTTCAGC...TGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
3UTR-3UTR GCA 90 bp TCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGCTGAAGGGAGCCATTaGCAGAGGGAAGAACACAAA +
Preference number: 2 (lower is better)
Translates to: SLKLKTCTTLPVKAGATEAEGSH*QREEHK
Trigger: TTTGTGTTCTTCCCTCTGGCAATGGCTCCCTTCAGC...CTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
3UTR-3UTR GCA 90 bp TCTCCATGCTCATCCCATACCCCAGTGACAGGATACCGCTTCCCTGAAGTTAAAGCTGAAGGGAGCCATTaGCAGAGGGAAGAACACAAA +
Preference number: 2 (lower is better)
Translates to: SPCSSHTPVTGYRFPEVKAEGSH*QREEHK
Trigger: TTTGTGTTCTTCCCTCTGGCAATGGCTCCCTTCAGC...TTTAACTTCAGGGAAGCGGTATCCTGTCACTGGGGTATGGGATGAGCATGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
3UTR-3UTR TCA 90 bp TTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGACAGCCGAGGACAGATTaGCAGAAACCCCACTATGTT +
Preference number: 2 (lower is better)
Translates to: FPEVKNMHHTSGKGWSHRQPRTD*QKPHYV
Trigger: AACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTG...TCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
3UTR-3UTR GCA 90 bp TTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAACAATCTCAACTCACTaGAACCTCCACCCCCTGAGT +
Preference number: 2 (lower is better)
Translates to: LLSRSHQQMRRAAEDRLTTISTH*NLHPLS
Trigger: ACTCAGGGGGTGGAGGTTGCAGTGAGTTGAGATTGT...TGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
3UTR-3UTR CCA 90 bp ACCGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCCTGTGTGAATTGGAGTaGAAAGCAGAAGTGCTGAAG +
Preference number: 2 (lower is better)
Translates to: TASLKLKTCTTLPVKAGALCELE*KAEVLK
Trigger: CTTCAGCACTTCTGCTTTCCACTCCAATTCACACAG...GGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
3UTR-3UTR CCA 90 bp CGGAGCTTGTGCAGCCTGGATGTATCTCTTGCACTGGAACTTTGTGCTCTTATGGGGACTAGTTCTTCCTaGAGCAGAGTCTCCAAAAGT +
Preference number: 2 (lower is better)
Translates to: RSLCSLDVSLALELCALMGTSSS*SRVSKS
Trigger: ACTTTTGGAGACTCTGCTCCAGGAAGAACTAGTCCC...CATAAGAGCACAAAGTTCCAGTGCAAGAGATACATCCAGGCTGCACAAGCTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR-3UTR CCA 90 bp CAAACTTTGGTTTCTTTTGGCTTGCCAGGCCCCACTCCCGGAGCTTGTGCAGCCATGTATCTCTTGCACTaGAACTTTGTGCTCTTATGT +
Preference number: 2 (lower is better)
Translates to: QTLVSFGLPGPTPGACAAMYLLH*NFVLLC
Trigger: ACATAAGAGCACAAAGTTCCAGTGCAAGAGATACAT...GGCTGCACAAGCTCCGGGAGTGGGGCCTGGCAAGCCAAAAGAAACCAAAGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR-3UTR CCA 90 bp TCTCCATGCTCATCCCATACCCCAGTGACAGGATACCGCTTCCCTGAAGTTAAACTGTGTGAATTGGAGTaGAAAGCAGAAGTGCTGAAG +
Preference number: 2 (lower is better)
Translates to: SPCSSHTPVTGYRFPEVKLCELE*KAEVLK
Trigger: CTTCAGCACTTCTGCTTTCCACTCCAATTCACACAG...TTTAACTTCAGGGAAGCGGTATCCTGTCACTGGGGTATGGGATGAGCATGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
3UTR-3UTR CCA 90 bp ATGGAGTTTCTGCATCAAATTAAGTCATTCCTCCAGCATCTAGGTCCCAAGGATACTTCCGGTAAAGGCTaGAGCCACAGAGGGCACCTA +
Preference number: 2 (lower is better)
Translates to: MEFLHQIKSFLQHLGPKDTSGKG*SHRGHL
Trigger: TAGGTGCCCTCTGTGGCTCCAGCCTTTACCGGAAGT...ATCCTTGGGACCTAGATGCTGGAGGAATGACTTAATTTGATGCAGAAACTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR CAA 90 bp CTGTGTATGTGTGATGCCCTATTTGCTGCATCTGTGTCGGGTGCTTaGAAGTACTCATTAAAGGTCTCCAGAAAGGGACTTCACCCATCT +
Preference number: 2 (lower is better)
Translates to: LCMCDALFAASVSGA*KYSLKVSRKGLHPS
Trigger: AGATGGGTGAAGTCCCTTTCTGGAGACCTTTAATGAGTACTTCAAAGCACCCGACACAGATGCAGCAAATAGGGCATCACACATACACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR-3UTR CCA 90 bp TTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACACTGTGTGAATTGGAGTaGAAAGCAGAAGTGCTGAAG +
Preference number: 2 (lower is better)
Translates to: LLSRSHQQMRRAAEDRLTLCELE*KAEVLK
Trigger: CTTCAGCACTTCTGCTTTCCACTCCAATTCACACAG...TGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
3UTR-3UTR TCA 90 bp GGATGTATCTCTTGCACTGGAACTTTGTGCTCTTATGTCCTTATAATTAACTCCGGAAAGCAGAAGTGCTaGAGGGAGCCATTGCCAGAG +
Preference number: 2 (lower is better)
Translates to: GCISCTGTLCSYVLIINSGKQKC*REPLPE
Trigger: CTCTGGCAATGGCTCCCTTCAGCACTTCTGCTTTCC...GGAGTTAATTATAAGGACATAAGAGCACAAAGTTCCAGTGCAAGAGATACATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR-3UTR CCA 90 bp CGGAGCTTGTGCAGCCTGGATGTATCTCTTGCACTGGAACTTTGTGCTCTTATGTTTGACATGTTCCCATaGCAATTTTTGGAAACCATG +
Preference number: 2 (lower is better)
Translates to: RSLCSLDVSLALELCALMFDMFP*QFLETM
Trigger: CATGGTTTCCAAAAATTGCCATGGGAACATGTCAAA...CATAAGAGCACAAAGTTCCAGTGCAAGAGATACATCCAGGCTGCACAAGCTCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR-3UTR TCA 90 bp GGATGTATCTCTTGCACTGGAACTTTGTGCTCTTATGTCCTTATAATTAACTCCCTGATTTTGAACTGCTaGCCTCAGGTGATCCACCTG +
Preference number: 2 (lower is better)
Translates to: GCISCTGTLCSYVLIINSLILNC*PQVIHL
Trigger: CAGGTGGATCACCTGAGGTCAGCAGTTCAAAATCAG...GGAGTTAATTATAAGGACATAAGAGCACAAAGTTCCAGTGCAAGAGATACATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR-3UTR CCA 90 bp GCGATGCAAAAATACACAGTCATAAAAGGCTATGTGGCTTCAGAAAGAGGAACACTGTGTGAATTGGAGTaGAAAGCAGAAGTGCTGAAG +
Preference number: 2 (lower is better)
Translates to: AMQKYTVIKGYVASERGTLCELE*KAEVLK
Trigger: CTTCAGCACTTCTGCTTTCCACTCCAATTCACACAG...TGTTCCTCTTTCTGAAGCCACATAGCCTTTTATGACTGTGTATTTTTGCATCGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR-3UTR GCA 90 bp GGATGTATCTCTTGCACTGGAACTTTGTGCTCTTATGTCCTTATAATTAACTCCTGCATCTGTGTCGGGTaGTTTGAAGTACTCATTAAA +
Preference number: 2 (lower is better)
Translates to: GCISCTGTLCSYVLIINSCICVG*FEVLIK
Trigger: TTTAATGAGTACTTCAAAGCACCCGACACAGATGCA...GGAGTTAATTATAAGGACATAAGAGCACAAAGTTCCAGTGCAAGAGATACATCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR TCA 72 bp ACACAGGCTCGGCACCTGCTGGTCCACCTTGGTTCCTaGTGTGTCTCTGAGGCCAACTTTGCGAGGCCTTAT +
Preference number: 3 (lower is better)
Translates to: TQARHLLVHLGS*CVSEANFARPY
Trigger: ATAAGGCCTCGCAAAGTTGGCCTCAGAGACACATCAGGAACCAAGGTGGACCAGCAGGTGCCGAGCCTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR GCA 72 bp AACGTCTCCTCCAAGCAGATACACAGGCTCGGCACCTaGTGGTCCACCTTGGTTCCTGATGTGTCTCTGAGG +
Preference number: 3 (lower is better)
Translates to: NVSSKQIHRLGT*WSTLVPDVSLR
Trigger: CCTCAGAGACACATCAGGAACCAAGGTGGACCAGCAGGTGCCGAGCCTGTGTATCTGCTTGGAGGAGACGTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR CCA 72 bp GGCTTGCCAGGCCCCACTCCCGGAGCTTGTGCAGCCTaGATGTATCTCTTGCACTGGAACTTTGTGCTCTTA +
Preference number: 3 (lower is better)
Translates to: GLPGPTPGACAA*MYLLHWNFVLL
Trigger: TAAGAGCACAAAGTTCCAGTGCAAGAGATACATCCAGGCTGCACAAGCTCCGGGAGTGGGGCCTGGCAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR-3UTR CAA 90 bp ACATTGGAACGTCTCCTCCAAGCAGATACACAGGCTCGGCACCTGCTGGTCCACGCAGCCGAGGACAGATaGACAGAAACCCCACTATGT +
Preference number: 3 (lower is better)
Translates to: TLERLLQADTQARHLLVHAAEDR*TETPLC
Trigger: ACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGC...GTGGACCAGCAGGTGCCGAGCCTGTGTATCTGCTTGGAGGAGACGTTCCAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR-3UTR CAA 90 bp GGCACCTGCTGGTCCACCTTGGTTCCTGATGTGTCTCTGAGGCCAACTTTGCGAGTGAGAGGTACTCCCTaGGGTGATGGAGTTTCTGCA +
Preference number: 3 (lower is better)
Translates to: GTCWSTLVPDVSLRPTLRVRGTP*GDGVSA
Trigger: TGCAGAAACTCCATCACCCAAGGGAGTACCTCTCAC...TCGCAAAGTTGGCCTCAGAGACACATCAGGAACCAAGGTGGACCAGCAGGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR GCA 72 bp TTCTTTTGGCTTGCCAGGCCCCACTCCCGGAGCTTGTaGAGCCTGGATGTATCTCTTGCACTGGAACTTTGT +
Preference number: 3 (lower is better)
Translates to: FFWLARPHSRSL*SLDVSLALELC
Trigger: ACAAAGTTCCAGTGCAAGAGATACATCCAGGCTGCACAAGCTCCGGGAGTGGGGCCTGGCAAGCCAAAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR GCA 72 bp AACAGAAGGCAAGACAAACTTTGGTTTCTTTTGGCTTaGCAGGCCCCACTCCCGGAGCTTGTGCAGCCTGGA +
Preference number: 3 (lower is better)
Translates to: NRRQDKLWFLLA*QAPLPELVQPG
Trigger: TCCAGGCTGCACAAGCTCCGGGAGTGGGGCCTGGCAAGCCAAAAGAAACCAAAGTTTGTCTTGCCTTCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR CCA 72 bp AGAGGAACAGAAGGCAAGACAAACTTTGGTTTCTTTTaGCTTGCCAGGCCCCACTCCCGGAGCTTGTGCAGC +
Preference number: 3 (lower is better)
Translates to: RGTEGKTNFGFF*LARPHSRSLCS
Trigger: GCTGCACAAGCTCCGGGAGTGGGGCCTGGCAAGCCAAAAGAAACCAAAGTTTGTCTTGCCTTCTGTTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR-3UTR CAA 90 bp ACCGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCGGGCACCTAGCAAGCTaGCTTTCAAGGTCCCATCAA +
Preference number: 3 (lower is better)
Translates to: TASLKLKTCTTLPVKAGAGHLAS*LSRSHQ
Trigger: TTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCC...GGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
3UTR-3UTR CAA 90 bp AGTTCTTCCTGGAGCAGAGTCTCCAAAAGTGGCCCTTTGACATGTTCCCATGGCCCAAGCCTGTGTGAATaGGAGTGGAAAGCAGAAGTG +
Preference number: 3 (lower is better)
Translates to: SSSWSRVSKSGPLTCSHGPSLCE*EWKAEV
Trigger: CACTTCTGCTTTCCACTCCAATTCACACAGGCTTGG...GCCATGGGAACATGTCAAAGGGCCACTTTTGGAGACTCTGCTCCAGGAAGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR-3UTR CAA 90 bp CGGAGCTTGTGCAGCCTGGATGTATCTCTTGCACTGGAACTTTGTGCTCTTATGGGGCACCTAGCAAGCTaGCTTTCAAGGTCCCATCAA +
Preference number: 3 (lower is better)
Translates to: RSLCSLDVSLALELCALMGHLAS*LSRSHQ
Trigger: TTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCC...CATAAGAGCACAAAGTTCCAGTGCAAGAGATACATCCAGGCTGCACAAGCTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR-3UTR CAA 90 bp CAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCCCAAGCCTGTGTGAATaGGAGTGGAAAGCAGAAGTG +
Preference number: 3 (lower is better)
Translates to: QQMRRAAEDRLTETPLCCPSLCE*EWKAEV
Trigger: CACTTCTGCTTTCCACTCCAATTCACACAGGCTTGG...GCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
3UTR-3UTR CAA 90 bp TCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGCCAAGCCTGTGTGAATaGGAGTGGAAAGCAGAAGTG +
Preference number: 3 (lower is better)
Translates to: SLKLKTCTTLPVKAGATEPSLCE*EWKAEV
Trigger: CACTTCTGCTTTCCACTCCAATTCACACAGGCTTGG...CTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
3UTR-3UTR CAA 90 bp AGAGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCACCAAGCCTGTGTGAATaGGAGTGGAAAGCAGAAGTG +
Preference number: 3 (lower is better)
Translates to: RGHLASLLSRSHQQMRRAPSLCE*EWKAEV
Trigger: CACTTCTGCTTTCCACTCCAATTCACACAGGCTTGG...TGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
3UTR-3UTR CAA 90 bp TTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGGCACCTAGCAAGCTaGCTTTCAAGGTCCCATCAA +
Preference number: 3 (lower is better)
Translates to: FPEVKNMHHTSGKGWSHRGHLAS*LSRSHQ
Trigger: TTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCC...TCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
3UTR-3UTR CAA 90 bp AGGCAAGACAAACTTTGGTTTCTTTTGGCTTGCCAGGCCCCACTCCCGGAGCTTAGGTCCCAAGGATGTTaGTGTAGTTCTCTAAGTCAC +
Preference number: 3 (lower is better)
Translates to: RQDKLWFLLACQAPLPELRSQGC*CSSLSH
Trigger: GTGACTTAGAGAACTACACAAACATCCTTGGGACCT...AAGCTCCGGGAGTGGGGCCTGGCAAGCCAAAAGAAACCAAAGTTTGTCTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR CCA 72 bp GAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTaGAGCCACAGAGGGCACCTAGCAAGCTTGCTTTCA +
Preference number: 3 (lower is better)
Translates to: EVKNMHHTSGKG*SHRGHLASLLS
Trigger: TGAAAGCAAGCTTGCTAGGTGCCCTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
3UTR-3UTR CAA 90 bp CGGAGCTTGTGCAGCCTGGATGTATCTCTTGCACTGGAACTTTGTGCTCTTATGCGGAGTTTCAGCATTTaGGCCAGGCTGATTTTGAAC +
Preference number: 3 (lower is better)
Translates to: RSLCSLDVSLALELCALMRSFSI*ARLILN
Trigger: GTTCAAAATCAGCCTGGCCAAAATGCTGAAACTCCG...CATAAGAGCACAAAGTTCCAGTGCAAGAGATACATCCAGGCTGCACAAGCTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR TCA 72 bp CTTAATCCTTCAGAGCAAGCACAGCACTGTTTACAGTaGGAGGTACTCCCTTGGGTGATGGAGTTTCTGCAT +
Preference number: 3 (lower is better)
Translates to: LNPSEQAQHCLQ*EVLPWVMEFLH
Trigger: ATGCAGAAACTCCATCACCCAAGGGAGTACCTCTCACTGTAAACAGTGCTGTGCTTGCTCTGAAGGATTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR GCA 72 bp CCACTCCCGGAGCTTGTGCAGCCTGGATGTATCTCTTaGACTGGAACTTTGTGCTCTTATGTCCTTATAATT +
Preference number: 3 (lower is better)
Translates to: PLPELVQPGCIS*TGTLCSYVLII
Trigger: AATTATAAGGACATAAGAGCACAAAGTTCCAGTGCAAGAGATACATCCAGGCTGCACAAGCTCCGGGAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR TCA 72 bp GTTCTTCCTGGAGCAGAGTCTCCAAAAGTGGCCCTTTaGCATGTTCCCATGGCAATTTTTGGAAACCATGAT +
Preference number: 3 (lower is better)
Translates to: VLPGAESPKVAL*HVPMAIFGNHD
Trigger: ATCATGGTTTCCAAAAATTGCCATGGGAACATGTCAAAGGGCCACTTTTGGAGACTCTGCTCCAGGAAGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR GCA 72 bp CTTTGCAGTTTCATTCCCATAGCAGGACTGGTGCATTaGTTCTGTTGGGACTTCTTGCTTAATCCTTCAGAG +
Preference number: 3 (lower is better)
Translates to: LCSFIPIAGLVH*FCWDFLLNPSE
Trigger: CTCTGAAGGATTAAGCAAGAAGTCCCAACAGAAGCAATGCACCAGTCCTGCTATGGGAATGAAACTGCAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR GCA 72 bp TTTTTGCCTGAGAAATTGTGGTGGGTTTCTGTTTCTTaGAACTACACCATCTCTGAACAAGGCAGCACATTG +
Preference number: 3 (lower is better)
Translates to: FLPEKLWWVSVS*NYTISEQGSTL
Trigger: CAATGTGCTGCCTTGTTCAGAGATGGTGTAGTTGCAAGAAACAGAAACCCACCACAATTTCTCAGGCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR GCA 72 bp GTGCAGCCTGGATGTATCTCTTGCACTGGAACTTTGTaGTCTTATGTCCTTATAATTAACTCCCTTTTTGCC +
Preference number: 3 (lower is better)
Translates to: VQPGCISCTGTL*SYVLIINSLFA
Trigger: GGCAAAAAGGGAGTTAATTATAAGGACATAAGAGCACAAAGTTCCAGTGCAAGAGATACATCCAGGCTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR CCA 72 bp CAGAGTCTCCAAAAGTGGCCCTTTGACATGTTCCCATaGCAATTTTTGGAAACCATGATAGAAACAATCAGA +
Preference number: 3 (lower is better)
Translates to: QSLQKWPFDMFP*QFLETMIETIR
Trigger: TCTGATTGTTTCTATCATGGTTTCCAAAAATTGCCATGGGAACATGTCAAAGGGCCACTTTTGGAGACTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR CAA 72 bp TTGAGGTCCTGTCTGCAGAAACAGCCCCAGGTGCTGTaGAGGGCAAGGCACTCCTCCTCGGGGCGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: LRSCLQKQPQVL*RARHSSSGRQA
Trigger: GGCCTGCCGCCCCGAGGAGGAGTGCCTTGCCCTCAACAGCACCTGGGGCTGTTTCTGCAGACAGGACCTCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574982.1
CDS-3UTR TCA 90 bp CCTCCTCGGGGCGGCAGGCCTTCTCACACTTGTCCTCCACAGTGGATGGGTCTGTGTCCACCTTCACCTTaGTCTCCCTGGGCCCACAGT +
Preference number: 4 (lower is better)
Translates to: PPRGGRPSHTCPPQWMGLCPPSP*SPWAHS
Trigger: ACTGTGGGCCCAGGGAGATCAAGGTGAAGGTGGACA...CAGACCCATCCACTGTGGAGGACAAGTGTGAGAAGGCCTGCCGCCCCGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574982.1
CDS-3UTR TCA 90 bp AGGCCTCCCAGCAAACATTTGTCCACCTTCACCTTGATCTCCCTGGGCCCACAGAGCCCCAGGTGCTGTTaGGGGCAAGGCACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RPPSKHLSTFTLISLGPQSPRCC*GQGTPP
Trigger: AGGAGGAGTGCCTTGCCCTCAACAGCACCTGGGGCT...CTGTGGGCCCAGGGAGATCAAGGTGAAGGTGGACAAATGTTTGCTGGGAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574982.1
CDS-3UTR CCA 90 bp CAAACTTTGGTTTCTTTTGGCTTGCCAGGCCCCACTCCCGGAGCTTGTGCAGCCTCCAACCGGTACACATaGTACCCGCCTGGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: QTLVSFGLPGPTPGACAASNRYT*YPPGQA
Trigger: GGCCTGCCCAGGCGGGTACCATGTGTACCGGTTGGA...GGCTGCACAAGCTCCGGGAGTGGGGCCTGGCAAGCCAAAAGAAACCAAAGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR TCA 90 bp CCTCCTCGGGGCGGCAGGCCTTCTCACACTTGTCCTCCACAGTGGATGGGTCTGTTGCTAGGTCTTCCTTaGCATCTGAGATGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: PPRGGRPSHTCPPQWMGLLLGLP*HLRCQV
Trigger: CACCTGGCATCTCAGATGTCAAGGAAGACCTAGCAA...CAGACCCATCCACTGTGGAGGACAAGTGTGAGAAGGCCTGCCGCCCCGAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574982.1
CDS-3UTR TCA 90 bp ACGTCTCCTCCAAGCAGATACACAGGCTCGGCACCTGCTGGTCCACCTTGGTTCCCCATGCAGCTCCGATaGGAACACAAAGCGTTCCTC +
Preference number: 4 (lower is better)
Translates to: TSPPSRYTGSAPAGPPWFPMQLR*EHKAFL
Trigger: GAGGAACGCTTTGTGTTCTCATCGGAGCTGCATGGG...GAACCAAGGTGGACCAGCAGGTGCCGAGCCTGTGTATCTGCTTGGAGGAGACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR TCA 90 bp CCTCCTCGGGGCGGCAGGCCTTCTCACACTTGTCCTCCACAGTGGATGGGTCTGGGACATCAGAACTATTaGGGTCCTGTCTGCAGAAAC +
Preference number: 4 (lower is better)
Translates to: PPRGGRPSHTCPPQWMGLGHQNY*GPVCRN
Trigger: GTTTCTGCAGACAGGACCTCAATAGTTCTGATGTCC...CAGACCCATCCACTGTGGAGGACAAGTGTGAGAAGGCCTGCCGCCCCGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574982.1
CDS-3UTR TCA 90 bp ACCCAGGCCTCCCAGCAAACATTTGTCCACCTTCACCTTGATCTCCCTGGGCCCCACAGTGGATGGGTCTaGGCCACCTTCTCTGCACTT +
Preference number: 4 (lower is better)
Translates to: TQASQQTFVHLHLDLPGPHSGWV*ATFSAL
Trigger: AAGTGCAGAGAAGGTGGCTCAGACCCATCCACTGTG...GGGCCCAGGGAGATCAAGGTGAAGGTGGACAAATGTTTGCTGGGAGGCCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574982.1
CDS-3UTR GCA 90 bp AAGGCACTCCTCCTCGGGGCGGCAGGCCTTCTCACACTTGTCCTCCACAGTGGACTGAGCCACCTTCTCTaGACTTCTATCCTCACTTGC +
Preference number: 4 (lower is better)
Translates to: KALLLGAAGLLTLVLHSGLSHLL*TSILTC
Trigger: GCAAGTGAGGATAGAAGTGCAGAGAAGGTGGCTCAG...TCCACTGTGGAGGACAAGTGTGAGAAGGCCTGCCGCCCCGAGGAGGAGTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574982.1
CDS-3UTR CCA 90 bp TTTTGGCTTGCCAGGCCCCACTCCCGGAGCTTGTGCAGCCTGGATGTATCTCTTTGGGCACAGGCAGTGTaGTTGGTGATGCCATCCCCA +
Preference number: 4 (lower is better)
Translates to: FWLARPHSRSLCSLDVSLWAQAV*LVMPSP
Trigger: TGGGGATGGCATCACCAACCACACTGCCTGTGCCCA...AAGAGATACATCCAGGCTGCACAAGCTCCGGGAGTGGGGCCTGGCAAGCCAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR TCA 90 bp AGGCAAGACAAACTTTGGTTTCTTTTGGCTTGCCAGGCCCCACTCCCGGAGCTTCTCGCAGGTAGGCAATaGCCTCCTCCCCCAAACCCA +
Preference number: 4 (lower is better)
Translates to: RQDKLWFLLACQAPLPELLAGRQ*PPPPNP
Trigger: TGGGTTTGGGGGAGGAGGTCATTGCCTACCTGCGAG...AAGCTCCGGGAGTGGGGCCTGGCAAGCCAAAAGAAACCAAAGTTTGTCTTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR TCA 90 bp CAAACTTTGGTTTCTTTTGGCTTGCCAGGCCCCACTCCCGGAGCTTGTGCAGCCGCGGACTTGACTTCTTaGGCAAGAAGGCTGGCACTG +
Preference number: 4 (lower is better)
Translates to: QTLVSFGLPGPTPGACAAADLTS*ARRLAL
Trigger: CAGTGCCAGCCTTCTTGCTCAAGAAGTCAAGTCCGC...GGCTGCACAAGCTCCGGGAGTGGGGCCTGGCAAGCCAAAAGAAACCAAAGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR GCA 90 bp ACGTCTCCTCCAAGCAGATACACAGGCTCGGCACCTGCTGGTCCACCTTGGTTCAGGAATCGTGGCTGGTaGCTCTTCTCCATGCTCATC +
Preference number: 4 (lower is better)
Translates to: TSPPSRYTGSAPAGPPWFRNRGW*LFSMLI
Trigger: GATGAGCATGGAGAAGAGGCACCAGCCACGATTCCT...GAACCAAGGTGGACCAGCAGGTGCCGAGCCTGTGTATCTGCTTGGAGGAGACGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CCA 90 bp CACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGCACATGGTACCCGCCTaGGCAGGCCTTCACCAGCAC +
Preference number: 4 (lower is better)
Translates to: HLASLLSRSHQQMRRAAEHMVPA*AGLHQH
Trigger: GTGCTGGTGAAGGCCTGCCCAGGCGGGTACCATGTG...CTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302555.10
ENST00000381362.8
CDS-3UTR CCA 90 bp TTTTGGCTTGCCAGGCCCCACTCCCGGAGCTTGTGCAGCCTGGATGTATCTCTTCAGCCTTGTCTTCAGTaGGGGTGGCATAGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: FWLARPHSRSLCSLDVSLQPCLQ*GWHSSS
Trigger: GGAACTGCTATGCCACCCCCACTGAAGACAAGGCTG...AAGAGATACATCCAGGCTGCACAAGCTCCGGGAGTGGGGCCTGGCAAGCCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CCA 90 bp AAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCCCCGGGCTAGGTCGATaGCCGGTACTTCACTGCGGA +
Preference number: 4 (lower is better)
Translates to: KVPSTNEKGSRGQIDRNPPGLGR*PVLHCG
Trigger: TCCGCAGTGAAGTACCGGCCATCGACCTAGCCCGGG...GGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp AGTTCTTCCTGGAGCAGAGTCTCCAAAAGTGGCCCTTTGACATGTTCCCATGGCGGCCTCCCGAGTAGCTaGGATTACAGGCGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SSSWSRVSKSGPLTCSHGGLPSS*DYRRLP
Trigger: TGGCAGGCGCCTGTAATCCCAGCTACTCGGGAGGCC...GCCATGGGAACATGTCAAAGGGCCACTTTTGGAGACTCTGCTCCAGGAAGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CCA 90 bp ACCGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCGGCCTCCCGAGTAGCTaGGATTACAGGCGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: TASLKLKTCTTLPVKAGAGLPSS*DYRRLP
Trigger: TGGCAGGCGCCTGTAATCCCAGCTACTCGGGAGGCC...GGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp TCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGAGCCCCAGGTGCTGTTaGGGGCAAGGCACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SLKLKTCTTLPVKAGATESPRCC*GQGTPP
Trigger: AGGAGGAGTGCCTTGCCCTCAACAGCACCTGGGGCT...CTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp CGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACCTCGCAGGTAGGCAATaGCCTCCTCCCCCAAACCCA +
Preference number: 4 (lower is better)
Translates to: RFPEVKNMHHTSGKGWSHLAGRQ*PPPPNP
Trigger: TGGGTTTGGGGGAGGAGGTCATTGCCTACCTGCGAG...GTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp ACGTCTCCTCCAAGCAGATACACAGGCTCGGCACCTGCTGGTCCACCTTGGTTCCAGCCGAGGACAGATTaGCAGAAACCCCACTATGTT +
Preference number: 4 (lower is better)
Translates to: TSPPSRYTGSAPAGPPWFQPRTD*QKPHYV
Trigger: AACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTG...GAACCAAGGTGGACCAGCAGGTGCCGAGCCTGTGTATCTGCTTGGAGGAGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR TCA 90 bp AGGCAAGACAAACTTTGGTTTCTTTTGGCTTGCCAGGCCCCACTCCCGGAGCTTCATCCCATACCCCAGTaGCAGGATACCGCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: RQDKLWFLLACQAPLPELHPIPQ*QDTASL
Trigger: CAGGGAAGCGGTATCCTGTCACTGGGGTATGGGATG...AAGCTCCGGGAGTGGGGCCTGGCAAGCCAAAAGAAACCAAAGTTTGTCTTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR GCA 90 bp GAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGGCACCGGCTTTCCGAGGACTaGCCATTCTCCTCCACGTGG +
Preference number: 4 (lower is better)
Translates to: EVKNMHHTSGKGWSHRGHRLSED*PFSSTW
Trigger: CCACGTGGAGGAGAATGGGCAGTCCTCGGAAAGCCG...GTGCCCTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp CGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACCGGCTTTCCGAGGACTaGCCATTCTCCTCCACGTGG +
Preference number: 4 (lower is better)
Translates to: RFPEVKNMHHTSGKGWSHRLSED*PFSSTW
Trigger: CCACGTGGAGGAGAATGGGCAGTCCTCGGAAAGCCG...GTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp AAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCCACAGGCTCGGCACCTaGTGGTCCACCTTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: KVPSTNEKGSRGQIDRNPHRLGT*WSTLVP
Trigger: AGGAACCAAGGTGGACCAGCAGGTGCCGAGCCTGTG...GGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR GCA 90 bp ACCGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCGTGGATGGGTCTCGCTaGACTGCAGATGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: TASLKLKTCTTLPVKAGAVDGSR*TADAWV
Trigger: GACCCAGGCATCTGCAGTGCAGCGAGACCCATCCAC...GGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341642.9
CDS-3UTR GCA 90 bp TTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGCCAGCCATGGGAATaGAGCCTGCTGTGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: FPEVKNMHHTSGKGWSHRGQPWE*SLLWAV
Trigger: GACGGCCCACAGCAGGCTGCATTCCCATGGCTGGCC...TCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS-3UTR CCA 90 bp AGTTCTTCCTGGAGCAGAGTCTCCAAAAGTGGCCCTTTGACATGTTCCCATGGCACAGACATGAGCCTCTaGGGTGCCAGGAGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: SSSWSRVSKSGPLTCSHGTDMSL*GARSSA
Trigger: TGCGGAGCTCCTGGCACCCCAGAGGCTCATGTCTGT...GCCATGGGAACATGTCAAAGGGCCACTTTTGGAGACTCTGCTCCAGGAAGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CCA 90 bp TCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGTCCAACCGGTACACATaGTACCCGCCTGGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: SLKLKTCTTLPVKAGATESNRYT*YPPGQA
Trigger: GGCCTGCCCAGGCGGGTACCATGTGTACCGGTTGGA...CTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302555.10
ENST00000381362.8
CDS-3UTR CCA 90 bp TCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGCCCGGGCTAGGTCGATaGCCGGTACTTCACTGCGGA +
Preference number: 4 (lower is better)
Translates to: SLKLKTCTTLPVKAGATEPGLGR*PVLHCG
Trigger: TCCGCAGTGAAGTACCGGCCATCGACCTAGCCCGGG...CTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp TCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGGCCTCCCGAGTAGCTaGGATTACAGGCGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SLKLKTCTTLPVKAGATEGLPSS*DYRRLP
Trigger: TGGCAGGCGCCTGTAATCCCAGCTACTCGGGAGGCC...CTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp GGCACCTGCTGGTCCACCTTGGTTCCTGATGTGTCTCTGAGGCCAACTTTGCGAATGTCTGTGGTATGGTaGGGGATAGGGGAGCTATGG +
Preference number: 4 (lower is better)
Translates to: GTCWSTLVPDVSLRPTLRMSVVW*GIGELW
Trigger: CCATAGCTCCCCTATCCCCCACCATACCACAGACAT...TCGCAAAGTTGGCCTCAGAGACACATCAGGAACCAAGGTGGACCAGCAGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR CAA 72 bp GGTTTCTTTTGGCTTGCCAGGCCCCACTCCCGGAGCTaGTGCAGCCTGGATGTATCTCTTGCACTGGAACTT +
Preference number: 4 (lower is better)
Translates to: GFFWLARPHSRS*CSLDVSLALEL
Trigger: AAGTTCCAGTGCAAGAGATACATCCAGGCTGCACAAGCTCCGGGAGTGGGGCCTGGCAAGCCAAAAGAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR CAA 72 bp GAACAGAAGGCAAGACAAACTTTGGTTTCTTTTGGCTaGCCAGGCCCCACTCCCGGAGCTTGTGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: EQKARQTLVSFG*PGPTPGACAAW
Trigger: CCAGGCTGCACAAGCTCCGGGAGTGGGGCCTGGCAAGCCAAAAGAAACCAAAGTTTGTCTTGCCTTCTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR TCA 90 bp GGCCTTATCTGTAGCTGTGGGAAGGGCGTAAGTCAGTGTACACATGTCAGCATCGGGTCAAAACAGACATaGGCCTCTGGGGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GLICSCGKGVSQCTHVSIGSKQT*ASGVPG
Trigger: TCCTGGCACCCCAGAGGCTCATGTCTGTTTTGACCC...GATGCTGACATGTGTACACTGACTTACGCCCTTCCCACAGCTACAGATAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR TCA 90 bp TCTCCATGCTCATCCCATACCCCAGTGACAGGATACCGCTTCCCTGAAGTTAAACCCCTGGGACCCTGCTaGGTTCTCTGTGCTTCGGAA +
Preference number: 4 (lower is better)
Translates to: SPCSSHTPVTGYRFPEVKPLGPC*VLCASE
Trigger: TTCCGAAGCACAGAGAACTCAGCAGGGTCCCAGGGG...TTTAACTTCAGGGAAGCGGTATCCTGTCACTGGGGTATGGGATGAGCATGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302555.10
ENST00000381362.8
CDS-3UTR TCA 90 bp TCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGAGGCAGTGTGGTTGGTaGTGCCATCCCCAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SLKLKTCTTLPVKAGATERQCGW*CHPQGQ
Trigger: CTGCCCTTGGGGATGGCATCACCAACCACACTGCCT...CTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302555.10
ENST00000381362.8
CDS-3UTR TCA 90 bp TCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGAGCCCCAGGTGCTGTTaGGGGCAAGGCACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: STNEKGSRGQIDRNPTMLSPRCC*GQGTPP
Trigger: AGGAGGAGTGCCTTGCCCTCAACAGCACCTGGGGCT...CAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp TTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAAGCCCCAGGTGCTGTTaGGGGCAAGGCACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: FPEVKNMHHTSGKGWSHRSPRCC*GQGTPP
Trigger: AGGAGGAGTGCCTTGCCCTCAACAGCACCTGGGGCT...TCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp GGCCTTATCTGTAGCTGTGGGAAGGGCGTAAGTCAGTGTACACATGTCAGCATCGGCCCACAGTCTAGCTaGGGCTGCAAACTGTGGACA +
Preference number: 4 (lower is better)
Translates to: GLICSCGKGVSQCTHVSIGPQSS*GCKLWT
Trigger: TGTCCACAGTTTGCAGCCTCAGCTAGACTGTGGGCC...GATGCTGACATGTGTACACTGACTTACGCCCTTCCCACAGCTACAGATAAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR TCA 90 bp CGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACGGCCCACAGTCTAGCTaGGGCTGCAAACTGTGGACA +
Preference number: 4 (lower is better)
Translates to: RFPEVKNMHHTSGKGWSHGPQSS*GCKLWT
Trigger: TGTCCACAGTTTGCAGCCTCAGCTAGACTGTGGGCC...GTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp GAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGGCACTGTCCACCTTCACCTTaGTCTCCCTGGGCCCACAGT +
Preference number: 4 (lower is better)
Translates to: EVKNMHHTSGKGWSHRGHCPPSP*SPWAHS
Trigger: ACTGTGGGCCCAGGGAGATCAAGGTGAAGGTGGACA...GTGCCCTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp ACCGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCTGTCCACCTTCACCTTaGTCTCCCTGGGCCCACAGT +
Preference number: 4 (lower is better)
Translates to: TASLKLKTCTTLPVKAGACPPSP*SPWAHS
Trigger: ACTGTGGGCCCAGGGAGATCAAGGTGAAGGTGGACA...GGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp TCTCCATGCTCATCCCATACCCCAGTGACAGGATACCGCTTCCCTGAAGTTAAACTCGCAGGTAGGCAATaGCCTCCTCCCCCAAACCCA +
Preference number: 4 (lower is better)
Translates to: SPCSSHTPVTGYRFPEVKLAGRQ*PPPPNP
Trigger: TGGGTTTGGGGGAGGAGGTCATTGCCTACCTGCGAG...TTTAACTTCAGGGAAGCGGTATCCTGTCACTGGGGTATGGGATGAGCATGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp CACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGCAACCTCCACCCCCTaGGTTCGAGCAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: HLASLLSRSHQQMRRAAEATSTP*VRAILL
Trigger: CAGGAGAATTGCTCGAACTCAGGGGGTGGAGGTTGC...CTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp AAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCGCAACCTCCACCCCCTaGGTTCGAGCAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: KVPSTNEKGSRGQIDRNPATSTP*VRAILL
Trigger: CAGGAGAATTGCTCGAACTCAGGGGGTGGAGGTTGC...GGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp ACATTGGAACGTCTCCTCCAAGCAGATACACAGGCTCGGCACCTGCTGGTCCACCTGCTGAGTTCTCTGTaGTTCGGAAGGGTTCATCCA +
Preference number: 4 (lower is better)
Translates to: TLERLLQADTQARHLLVHLLSSL*FGRVHP
Trigger: TGGATGAACCCTTCCGAAGCACAGAGAACTCAGCAG...GTGGACCAGCAGGTGCCGAGCCTGTGTATCTGCTTGGAGGAGACGTTCCAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR GCA 90 bp AAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCTCTGTCTGGCATCGGTaGACCTGGACACAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: KVPSTNEKGSRGQIDRNPSVWHR*TWTQVS
Trigger: GGAGACCTGTGTCCAGGTGCACCGATGCCAGACAGA...GGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302555.10
ENST00000381362.8
CDS-3UTR GCA 90 bp AGAGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCACGGCTTTCCGAGGACTaGCCATTCTCCTCCACGTGG +
Preference number: 4 (lower is better)
Translates to: RGHLASLLSRSHQQMRRARLSED*PFSSTW
Trigger: CCACGTGGAGGAGAATGGGCAGTCCTCGGAAAGCCG...TGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp AGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCTCTCGTGGAACTCGCTaGACTGCAGATGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: RAPSKLAFKVPSTNEKGSSRGTR*TADAWV
Trigger: GACCCAGGCATCTGCAGTGCAGCGAGTTCCACGAGA...GCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS-3UTR GCA 90 bp TCCTCCCCCAAACCCAGGCCTCCCAGCAAACATTTGTCCACCTTCACCTTGATCCTTACCTCGCTGCACTaGAGATGCCTGGGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: SSPKPRPPSKHLSTFTLILTSLH*RCLGQN
Trigger: ATTCTGACCCAGGCATCTGCAGTGCAGCGAGGTAAG...GATCAAGGTGAAGGTGGACAAATGTTTGCTGGGAGGCCTGGGTTTGGGGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574982.1
CDS-3UTR CCA 90 bp TCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGACAGACATGAGCCTCTaGGGTGCCAGGAGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: SLKLKTCTTLPVKAGATETDMSL*GARSSA
Trigger: TGCGGAGCTCCTGGCACCCCAGAGGCTCATGTCTGT...CTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302555.10
ENST00000381362.8
CDS-3UTR CCA 90 bp CGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACATGGGAGCGTCTGTCTaGCATCGGTGCACCTGGACA +
Preference number: 4 (lower is better)
Translates to: RFPEVKNMHHTSGKGWSHMGASV*HRCTWT
Trigger: TGTCCAGGTGCACCGATGCCAGACAGACGCTCCCAT...GTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302555.10
ENST00000381362.8
CDS-3UTR CCA 90 bp CGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACTGGGCACAGGCAGTGTaGTTGGTGATGCCATCCCCA +
Preference number: 4 (lower is better)
Translates to: RFPEVKNMHHTSGKGWSHWAQAV*LVMPSP
Trigger: TGGGGATGGCATCACCAACCACACTGCCTGTGCCCA...GTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302555.10
ENST00000381362.8
CDS-3UTR CCA 90 bp ACATTGGAACGTCTCCTCCAAGCAGATACACAGGCTCGGCACCTGCTGGTCCACCCTCCACGTGGATGGTaGAATCACGTTGATTTGAGC +
Preference number: 4 (lower is better)
Translates to: TLERLLQADTQARHLLVHPPRGW*NHVDLS
Trigger: GCTCAAATCAACGTGATTCCACCATCCACGTGGAGG...GTGGACCAGCAGGTGCCGAGCCTGTGTATCTGCTTGGAGGAGACGTTCCAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CCA 90 bp TTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGACCCGGGCTAGGTCGATaGCCGGTACTTCACTGCGGA +
Preference number: 4 (lower is better)
Translates to: FPEVKNMHHTSGKGWSHRPGLGR*PVLHCG
Trigger: TCCGCAGTGAAGTACCGGCCATCGACCTAGCCCGGG...TCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp TCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCCCGGGCTAGGTCGATaGCCGGTACTTCACTGCGGA +
Preference number: 4 (lower is better)
Translates to: STNEKGSRGQIDRNPTMLPGLGR*PVLHCG
Trigger: TCCGCAGTGAAGTACCGGCCATCGACCTAGCCCGGG...CAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp TTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGGCCTCCCGAGTAGCTaGGATTACAGGCGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: LLSRSHQQMRRAAEDRLTGLPSS*DYRRLP
Trigger: TGGCAGGCGCCTGTAATCCCAGCTACTCGGGAGGCC...TGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp AGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCGTCCTCCACAGTGGATaGGTCTCGCTGCACTGCAGA +
Preference number: 4 (lower is better)
Translates to: RAPSKLAFKVPSTNEKGSVLHSG*VSLHCR
Trigger: TCTGCAGTGCAGCGAGACCCATCCACTGTGGAGGAC...GCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341642.9
CDS-3UTR CCA 90 bp ACCGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCGTCCTCCACAGTGGATaGGTCTCGTGGAACTCGCTG +
Preference number: 4 (lower is better)
Translates to: TASLKLKTCTTLPVKAGAVLHSG*VSWNSL
Trigger: CAGCGAGTTCCACGAGACCCATCCACTGTGGAGGAC...GGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381360.9
3UTR CAA 72 bp TCCACCTTGGTTCCTGATGTGTCTCTGAGGCCAACTTaGCGAGGCCTTATCTGTAGCTGTGGGAAGGGCGTA +
Preference number: 4 (lower is better)
Translates to: STLVPDVSLRPT*RGLICSCGKGV
Trigger: TACGCCCTTCCCACAGCTACAGATAAGGCCTCGCAAAGTTGGCCTCAGAGACACATCAGGAACCAAGGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR TCA 90 bp ACCGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCCCCATGCAGCTCCGATaGGAACACAAAGCGTTCCTC +
Preference number: 4 (lower is better)
Translates to: TASLKLKTCTTLPVKAGAPMQLR*EHKAFL
Trigger: GAGGAACGCTTTGTGTTCTCATCGGAGCTGCATGGG...GGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp AGAGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGGGTCAAAACAGACATaGGCCTCTGGGGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: RGHLASLLSRSHQQMRRAGSKQT*ASGVPG
Trigger: TCCTGGCACCCCAGAGGCTCATGTCTGTTTTGACCC...TGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302555.10
ENST00000381362.8
CDS-3UTR TCA 90 bp TCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCCCCTGGGACCCTGCTaGGTTCTCTGTGCTTCGGAA +
Preference number: 4 (lower is better)
Translates to: STNEKGSRGQIDRNPTMLPLGPC*VLCASE
Trigger: TTCCGAAGCACAGAGAACTCAGCAGGGTCCCAGGGG...CAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302555.10
ENST00000381362.8
CDS-3UTR TCA 90 bp GAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCTTTTCTTTAGGCAGTGTGGTTGGTaGTGCCATCCCCAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: EKGSRGQIDRNPTMLLFFRQCGW*CHPQGQ
Trigger: CTGCCCTTGGGGATGGCATCACCAACCACACTGCCT...AAAGAAAAGCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302555.10
ENST00000381362.8
CDS-3UTR TCA 90 bp TCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGGCCCACAGTCTAGCTaGGGCTGCAAACTGTGGACA +
Preference number: 4 (lower is better)
Translates to: SLKLKTCTTLPVKAGATEGPQSS*GCKLWT
Trigger: TGTCCACAGTTTGCAGCCTCAGCTAGACTGTGGGCC...CTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp CAAACTGTGGACATCAGAACTATTGAGGTCCTGTCTGCAGAAACAGCCCCAGGTGGCCCACAGTCTAGCTaGGGCTGCAAACTGTGGACA +
Preference number: 4 (lower is better)
Translates to: QTVDIRTIEVLSAETAPGGPQSS*GCKLWT
Trigger: TGTCCACAGTTTGCAGCCTCAGCTAGACTGTGGGCC...ACCTGGGGCTGTTTCTGCAGACAGGACCTCAATAGTTCTGATGTCCACAGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574982.1
CDS-3UTR TCA 90 bp TTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACACTCGCAGGTAGGCAATaGCCTCCTCCCCCAAACCCA +
Preference number: 4 (lower is better)
Translates to: LLSRSHQQMRRAAEDRLTLAGRQ*PPPPNP
Trigger: TGGGTTTGGGGGAGGAGGTCATTGCCTACCTGCGAG...TGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp AGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCAGGCAGCTTGGAGGCTaGCTTTCATGTCCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: RAPSKLAFKVPSTNEKGSRQLGG*LSCPVG
Trigger: ACCCACTGGACATGAAAGTCAGCCTCCAAGCTGCCT...GCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp CACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGCGGACTTGACTTCTTaGGCAAGAAGGCTGGCACTG +
Preference number: 4 (lower is better)
Translates to: HLASLLSRSHQQMRRAAEADLTS*ARRLAL
Trigger: CAGTGCCAGCCTTCTTGCTCAAGAAGTCAAGTCCGC...CTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp GAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGGCACGCGGACTTGACTTCTTaGGCAAGAAGGCTGGCACTG +
Preference number: 4 (lower is better)
Translates to: EVKNMHHTSGKGWSHRGHADLTS*ARRLAL
Trigger: CAGTGCCAGCCTTCTTGCTCAAGAAGTCAAGTCCGC...GTGCCCTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp GAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGGCACGTGCACCTCTCCGAGTaGTGGGCCCCAAATCTAGAA +
Preference number: 4 (lower is better)
Translates to: EVKNMHHTSGKGWSHRGHVHLSE*WAPNLE
Trigger: TTCTAGATTTGGGGCCCATCACTCGGAGAGGTGCAC...GTGCCCTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp AAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCGGAAAGCAGAAGTGCTaGAGGGAGCCATTGCCAGAG +
Preference number: 4 (lower is better)
Translates to: KVPSTNEKGSRGQIDRNPGKQKC*REPLPE
Trigger: CTCTGGCAATGGCTCCCTTCAGCACTTCTGCTTTCC...GGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp TCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGCAACCTCCACCCCCTaGGTTCGAGCAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SLKLKTCTTLPVKAGATEATSTP*VRAILL
Trigger: CAGGAGAATTGCTCGAACTCAGGGGGTGGAGGTTGC...CTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp CGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACGGTCCCATCAACAAATaGGAAGGGCAGCCGAGGACA +
Preference number: 4 (lower is better)
Translates to: RFPEVKNMHHTSGKGWSHGPINK*EGQPRT
Trigger: TGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACC...GTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp ACCGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCGGTCCCATCAACAAATaGGAAGGGCAGCCGAGGACA +
Preference number: 4 (lower is better)
Translates to: TASLKLKTCTTLPVKAGAGPINK*EGQPRT
Trigger: TGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACC...GGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp CAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCCATCCCATACCCCAGTaGCAGGATACCGCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: QQMRRAAEDRLTETPLCCHPIPQ*QDTASL
Trigger: CAGGGAAGCGGTATCCTGTCACTGGGGTATGGGATG...GCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp AGGCAAGACAAACTTTGGTTTCTTTTGGCTTGCCAGGCCCCACTCCCGGAGCTTCAGCACTGTTTACAGTaGGAGGTACTCCCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: RQDKLWFLLACQAPLPELQHCLQ*EVLPWV
Trigger: CACCCAAGGGAGTACCTCTCACTGTAAACAGTGCTG...AAGCTCCGGGAGTGGGGCCTGGCAAGCCAAAAGAAACCAAAGTTTGTCTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR TCA 90 bp AGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCGTCCACCTTGGTTCCTaGTGTGTCTCTGAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: RAPSKLAFKVPSTNEKGSVHLGS*CVSEAN
Trigger: GTTGGCCTCAGAGACACATCAGGAACCAAGGTGGAC...GCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR GCA 90 bp TCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGTCTGTCTGGCATCGGTaGACCTGGACACAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: SLKLKTCTTLPVKAGATESVWHR*TWTQVS
Trigger: GGAGACCTGTGTCCAGGTGCACCGATGCCAGACAGA...CTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302555.10
ENST00000381362.8
CDS-3UTR GCA 90 bp GGCACCTGCTGGTCCACCTTGGTTCCTGATGTGTCTCTGAGGCCAACTTTGCGACAGTGGATGGGTCTGTaGAGTATCTCAGATTACACC +
Preference number: 4 (lower is better)
Translates to: GTCWSTLVPDVSLRPTLRQWMGL*SISDYT
Trigger: GGTGTAATCTGAGATACTGCACAGACCCATCCACTG...TCGCAAAGTTGGCCTCAGAGACACATCAGGAACCAAGGTGGACCAGCAGGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR GCA 90 bp TTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGACGGCTTTCCGAGGACTaGCCATTCTCCTCCACGTGG +
Preference number: 4 (lower is better)
Translates to: FPEVKNMHHTSGKGWSHRRLSED*PFSSTW
Trigger: CCACGTGGAGGAGAATGGGCAGTCCTCGGAAAGCCG...TCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp AGAACTATTGAGGTCCTGTCTGCAGAAACAGCCCCAGGTGCTGTTGAGGGCAAGGAATACTTACCTCGCTaGACTGCAGATGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: RTIEVLSAETAPGAVEGKEYLPR*TADAWV
Trigger: GACCCAGGCATCTGCAGTGCAGCGAGGTAAGTATTC...CTTGCCCTCAACAGCACCTGGGGCTGTTTCTGCAGACAGGACCTCAATAGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574982.1
CDS-3UTR CCA 90 bp CAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCTGGCATCGGTGCACCTaGACACAGGTCTCCGACATC +
Preference number: 4 (lower is better)
Translates to: QQMRRAAEDRLTETPLCCWHRCT*TQVSDI
Trigger: GATGTCGGAGACCTGTGTCCAGGTGCACCGATGCCA...GCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302555.10
ENST00000381362.8
CDS-3UTR CCA 90 bp AGAGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCATGGCATCGGTGCACCTaGACACAGGTCTCCGACATC +
Preference number: 4 (lower is better)
Translates to: RGHLASLLSRSHQQMRRAWHRCT*TQVSDI
Trigger: GATGTCGGAGACCTGTGTCCAGGTGCACCGATGCCA...TGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302555.10
ENST00000381362.8
CDS-3UTR CCA 90 bp AGAGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAATGGGAGCGTCTGTCTaGCATCGGTGCACCTGGACA +
Preference number: 4 (lower is better)
Translates to: RGHLASLLSRSHQQMRRAMGASV*HRCTWT
Trigger: TGTCCAGGTGCACCGATGCCAGACAGACGCTCCCAT...TGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302555.10
ENST00000381362.8
CDS-3UTR CCA 90 bp AAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCCCCCTTGTTCCAAGATaGCACCCACATACAGCACGG +
Preference number: 4 (lower is better)
Translates to: KVPSTNEKGSRGQIDRNPPLVPR*HPHTAR
Trigger: CCGTGCTGTATGTGGGTGCCATCTTGGAACAAGGGG...GGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTT
53% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp CGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACCCCCTTGTTCCAAGATaGCACCCACATACAGCACGG +
Preference number: 4 (lower is better)
Translates to: RFPEVKNMHHTSGKGWSHPLVPR*HPHTAR
Trigger: CCGTGCTGTATGTGGGTGCCATCTTGGAACAAGGGG...GTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp GAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGGCACCAGCCTTGTCTTCAGTaGGGGTGGCATAGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: EVKNMHHTSGKGWSHRGHQPCLQ*GWHSSS
Trigger: GGAACTGCTATGCCACCCCCACTGAAGACAAGGCTG...GTGCCCTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp CACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGACTTCCGGTAAAGGCTaGAGCCACAGAGGGCACCTA +
Preference number: 4 (lower is better)
Translates to: HLASLLSRSHQQMRRAAETSGKG*SHRGHL
Trigger: TAGGTGCCCTCTGTGGCTCCAGCCTTTACCGGAAGT...CTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp GAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGGCACACTTCCGGTAAAGGCTaGAGCCACAGAGGGCACCTA +
Preference number: 4 (lower is better)
Translates to: EVKNMHHTSGKGWSHRGHTSGKG*SHRGHL
Trigger: TAGGTGCCCTCTGTGGCTCCAGCCTTTACCGGAAGT...GTGCCCTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp GGCACCTGCTGGTCCACCTTGGTTCCTGATGTGTCTCTGAGGCCAACTTTGCGAGGGACTAGTTCTTCCTaGAGCAGAGTCTCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: GTCWSTLVPDVSLRPTLRGTSSS*SRVSKS
Trigger: ACTTTTGGAGACTCTGCTCCAGGAAGAACTAGTCCC...TCGCAAAGTTGGCCTCAGAGACACATCAGGAACCAAGGTGGACCAGCAGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CCA 90 bp GAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCTTTTCTTTTCCTCTGGCCAGCCATaGGAATGCAGCCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: EKGSRGQIDRNPTMLLFFSSGQP*ECSLLW
Trigger: CCACAGCAGGCTGCATTCCCATGGCTGGCCAGAGGA...AAAGAAAAGCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS-3UTR CCA 90 bp CACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGAAAGCGTTCCTCCTCTaGCCAGCCATGGGAATGCAG +
Preference number: 4 (lower is better)
Translates to: HLASLLSRSHQQMRRAAEKAFLL*PAMGMQ
Trigger: CTGCATTCCCATGGCTGGCCAGAGGAGGAACGCTTT...CTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381360.9
3UTR CAA 72 bp AAGAGGAACAGAAGGCAAGACAAACTTTGGTTTCTTTaGGCTTGCCAGGCCCCACTCCCGGAGCTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: KRNRRQDKLWFL*ACQAPLPELVQ
Trigger: CTGCACAAGCTCCGGGAGTGGGGCCTGGCAAGCCAAAAGAAACCAAAGTTTGTCTTGCCTTCTGTTCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR TCA 90 bp TCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGGGCCCACAGTCTAGCTaGGGCTGCAAACTGTGGACA +
Preference number: 4 (lower is better)
Translates to: STNEKGSRGQIDRNPTMLGPQSS*GCKLWT
Trigger: TGTCCACAGTTTGCAGCCTCAGCTAGACTGTGGGCC...CAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp TTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGATGTCCACCTTCACCTTaGTCTCCCTGGGCCCACAGT +
Preference number: 4 (lower is better)
Translates to: FPEVKNMHHTSGKGWSHRCPPSP*SPWAHS
Trigger: ACTGTGGGCCCAGGGAGATCAAGGTGAAGGTGGACA...TCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp CAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCAGGCAGCTTGGAGGCTaGCTTTCATGTCCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: QQMRRAAEDRLTETPLCCRQLGG*LSCPVG
Trigger: ACCCACTGGACATGAAAGTCAGCCTCCAAGCTGCCT...GCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp ACGTCTCCTCCAAGCAGATACACAGGCTCGGCACCTGCTGGTCCACCTTGGTTCAATGTCCAGCAAACATaGACATCTGAACTGAGAACC +
Preference number: 4 (lower is better)
Translates to: TSPPSRYTGSAPAGPPWFNVQQT*TSELRT
Trigger: GGTTCTCAGTTCAGATGTTCATGTTTGCTGGACATT...GAACCAAGGTGGACCAGCAGGTGCCGAGCCTGTGTATCTGCTTGGAGGAGACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR TCA 90 bp AGGCAAGACAAACTTTGGTTTCTTTTGGCTTGCCAGGCCCCACTCCCGGAGCTTCTGATTTTGAACTGCTaGCCTCAGGTGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: RQDKLWFLLACQAPLPELLILNC*PQVIHL
Trigger: CAGGTGGATCACCTGAGGTCAGCAGTTCAAAATCAG...AAGCTCCGGGAGTGGGGCCTGGCAAGCCAAAAGAAACCAAAGTTTGTCTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR TCA 90 bp TTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGCAACCTCCACCCCCTaGGTTCGAGCAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LLSRSHQQMRRAAEDRLTATSTP*VRAILL
Trigger: CAGGAGAATTGCTCGAACTCAGGGGGTGGAGGTTGC...TGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp TTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACACATCCCATACCCCAGTaGCAGGATACCGCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: LLSRSHQQMRRAAEDRLTHPIPQ*QDTASL
Trigger: CAGGGAAGCGGTATCCTGTCACTGGGGTATGGGATG...TGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp TCTCCATGCTCATCCCATACCCCAGTGACAGGATACCGCTTCCCTGAAGTTAAATTACGCAAAGGATGGTaGAAGAAGGGCCCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: SPCSSHTPVTGYRFPEVKLRKGW*KKGPPL
Trigger: GAGGGGAGGGCCCTTCTTTCACCATCCTTTGCGTAA...TTTAACTTCAGGGAAGCGGTATCCTGTCACTGGGGTATGGGATGAGCATGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS-3UTR GCA 90 bp ACCGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCTCTGCAAGATGCTGCTaGAGTTTGGGTCTCGCAGGT +
Preference number: 4 (lower is better)
Translates to: TASLKLKTCTTLPVKAGASARCC*SLGLAG
Trigger: ACCTGCGAGACCCAAACTGCAGCAGCATCTTGCAGA...GGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp CGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACTCTGCAAGATGCTGCTaGAGTTTGGGTCTCGCAGGT +
Preference number: 4 (lower is better)
Translates to: RFPEVKNMHHTSGKGWSHSARCC*SLGLAG
Trigger: ACCTGCGAGACCCAAACTGCAGCAGCATCTTGCAGA...GTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp AAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCTCTGCAAGATGCTGCTaGAGTTTGGGTCTCGCAGGT +
Preference number: 4 (lower is better)
Translates to: KVPSTNEKGSRGQIDRNPSARCC*SLGLAG
Trigger: ACCTGCGAGACCCAAACTGCAGCAGCATCTTGCAGA...GGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp AGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCTGTCTGCAAGATGCTaGTGCAGTTTGGGTCTCGCA +
Preference number: 4 (lower is better)
Translates to: RAPSKLAFKVPSTNEKGSLSARC*CSLGLA
Trigger: TGCGAGACCCAAACTGCAGCAGCATCTTGCAGACAG...GCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp ACCGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCCTGTCTGCAAGATGCTaGTGCAGTTTGGGTCTCGCA +
Preference number: 4 (lower is better)
Translates to: TASLKLKTCTTLPVKAGALSARC*CSLGLA
Trigger: TGCGAGACCCAAACTGCAGCAGCATCTTGCAGACAG...GGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp GAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGGCACCCTCTGTCTGCAAGATaGTGCTGCAGTTTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: EVKNMHHTSGKGWSHRGHPLSAR*CCSLGL
Trigger: GAGACCCAAACTGCAGCAGCATCTTGCAGACAGAGG...GTGCCCTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp CACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGCCTCTGTCTGCAAGATaGTGCTGCAGTTTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: HLASLLSRSHQQMRRAAEPLSAR*CCSLGL
Trigger: GAGACCCAAACTGCAGCAGCATCTTGCAGACAGAGG...CTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp AAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCGAACTTACAATGGGCTaGAAGGCAGCTTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: KVPSTNEKGSRGQIDRNPELTMG*KAAWRL
Trigger: CAGCCTCCAAGCTGCCTTGCAGCCCATTGTAAGTTC...GGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp ACCGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCGAACTTACAATGGGCTaGAAGGCAGCTTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: TASLKLKTCTTLPVKAGAELTMG*KAAWRL
Trigger: CAGCCTCCAAGCTGCCTTGCAGCCCATTGTAAGTTC...GGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp GAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGGCACTGGCCGGTACTTCACTaGGGACTTGACTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: EVKNMHHTSGKGWSHRGHWPVLH*GLDFLS
Trigger: GCTCAAGAAGTCAAGTCCGCAGTGAAGTACCGGCCA...GTGCCCTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp CGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACTGGCCGGTACTTCACTaGGGACTTGACTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: RFPEVKNMHHTSGKGWSHWPVLH*GLDFLS
Trigger: GCTCAAGAAGTCAAGTCCGCAGTGAAGTACCGGCCA...GTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp TCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGGTGCCTCTTCTCCATaGTCATCCCATACCCCAGTG +
Preference number: 4 (lower is better)
Translates to: SLKLKTCTTLPVKAGATEGASSP*SSHTPV
Trigger: CACTGGGGTATGGGATGAGCATGGAGAAGAGGCACC...CTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp AGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCAGGAATCGTGGCTGGTaGCTCTTCTCCATGCTCATC +
Preference number: 4 (lower is better)
Translates to: RAPSKLAFKVPSTNEKGSRNRGW*LFSMLI
Trigger: GATGAGCATGGAGAAGAGGCACCAGCCACGATTCCT...GCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp AAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCAGGAATCGTGGCTGGTaGCTCTTCTCCATGCTCATC +
Preference number: 4 (lower is better)
Translates to: KVPSTNEKGSRGQIDRNPRNRGW*LFSMLI
Trigger: GATGAGCATGGAGAAGAGGCACCAGCCACGATTCCT...GGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp TCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGTGGGTCTCGCTGCACTaGAGATGCCTGGGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: SLKLKTCTTLPVKAGATEWVSLH*RCLGQN
Trigger: ATTCTGACCCAGGCATCTGCAGTGCAGCGAGACCCA...CTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341642.9
CDS-3UTR CCA 90 bp AGAGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCATGCACTGCAGATGCCTaGGTCAGAATGCAGGAGACC +
Preference number: 4 (lower is better)
Translates to: RGHLASLLSRSHQQMRRACTADA*VRMQET
Trigger: GGTCTCCTGCATTCTGACCCAGGCATCTGCAGTGCA...TGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp TCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGTGCACTGCAGATGCCTaGGTCAGAATGCAGGAGACC +
Preference number: 4 (lower is better)
Translates to: SLKLKTCTTLPVKAGATECTADA*VRMQET
Trigger: GGTCTCCTGCATTCTGACCCAGGCATCTGCAGTGCA...CTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp CAAACTGTGGACATCAGAACTATTGAGGTCCTGTCTGCAGAAACAGCCCCAGGTTGCACTGCAGATGCCTaGGTCAGAATGCAGGAGACC +
Preference number: 4 (lower is better)
Translates to: QTVDIRTIEVLSAETAPGCTADA*VRMQET
Trigger: GGTCTCCTGCATTCTGACCCAGGCATCTGCAGTGCA...ACCTGGGGCTGTTTCTGCAGACAGGACCTCAATAGTTCTGATGTCCACAGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574982.1
CDS-3UTR CCA 90 bp CAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCCAGTTGCCACTCCAATaGGCACAGGCAGTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: QQMRRAAEDRLTETPLCCQLPLQ*AQAVWL
Trigger: CAACCACACTGCCTGTGCCCATTGGAGTGGCAACTG...GCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302555.10
ENST00000381362.8
CDS-3UTR CCA 90 bp AGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCGATGCTGCTGCAGTTTaGGTCTCGCAGGTAGGCAAT +
Preference number: 4 (lower is better)
Translates to: RAPSKLAFKVPSTNEKGSDAAAV*VSQVGN
Trigger: ATTGCCTACCTGCGAGACCCAAACTGCAGCAGCATC...GCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp GAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGGCACGATGCTGCTGCAGTTTaGGTCTCGCAGGTAGGCAAT +
Preference number: 4 (lower is better)
Translates to: EVKNMHHTSGKGWSHRGHDAAAV*VSQVGN
Trigger: ATTGCCTACCTGCGAGACCCAAACTGCAGCAGCATC...GTGCCCTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp AGAGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGGCTGCAAGGCAGCTTaGAGGCTGACTTTCATGTCC +
Preference number: 4 (lower is better)
Translates to: RGHLASLLSRSHQQMRRAGCKAA*RLTFMS
Trigger: GGACATGAAAGTCAGCCTCCAAGCTGCCTTGCAGCC...TGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp CAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCGGCTGCAAGGCAGCTTaGAGGCTGACTTTCATGTCC +
Preference number: 4 (lower is better)
Translates to: QQMRRAAEDRLTETPLCCGCKAA*RLTFMS
Trigger: GGACATGAAAGTCAGCCTCCAAGCTGCCTTGCAGCC...GCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp AGGCAAGACAAACTTTGGTTTCTTTTGGCTTGCCAGGCCCCACTCCCGGAGCTTTCAGGGAACTTACAATaGGCTGCAAGGCAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: RQDKLWFLLACQAPLPELSGNLQ*AARQLG
Trigger: TCCAAGCTGCCTTGCAGCCCATTGTAAGTTCCCTGA...AAGCTCCGGGAGTGGGGCCTGGCAAGCCAAAAGAAACCAAAGTTTGTCTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CCA 90 bp CAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCCCCCTTGTTCCAAGATaGCACCCACATACAGCACGG +
Preference number: 4 (lower is better)
Translates to: QQMRRAAEDRLTETPLCCPLVPR*HPHTAR
Trigger: CCGTGCTGTATGTGGGTGCCATCTTGGAACAAGGGG...GCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp AGAGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCACAGCCTTGTCTTCAGTaGGGGTGGCATAGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: RGHLASLLSRSHQQMRRAQPCLQ*GWHSSS
Trigger: GGAACTGCTATGCCACCCCCACTGAAGACAAGGCTG...TGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp TCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGCAGCCTTGTCTTCAGTaGGGGTGGCATAGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: SLKLKTCTTLPVKAGATEQPCLQ*GWHSSS
Trigger: GGAACTGCTATGCCACCCCCACTGAAGACAAGGCTG...CTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp TCTCCATGCTCATCCCATACCCCAGTGACAGGATACCGCTTCCCTGAAGTTAAAACTTCCGGTAAAGGCTaGAGCCACAGAGGGCACCTA +
Preference number: 4 (lower is better)
Translates to: SPCSSHTPVTGYRFPEVKTSGKG*SHRGHL
Trigger: TAGGTGCCCTCTGTGGCTCCAGCCTTTACCGGAAGT...TTTAACTTCAGGGAAGCGGTATCCTGTCACTGGGGTATGGGATGAGCATGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp AGAGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGGAAGGAATCGTGGCTaGTGCCTCTTCTCCATGCTC +
Preference number: 4 (lower is better)
Translates to: RGHLASLLSRSHQQMRRAGRNRG*CLFSML
Trigger: GAGCATGGAGAAGAGGCACCAGCCACGATTCCTTCC...TGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp TCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGACTTGTCCTCCACAGTaGATGGGTCTCGCTGCACTG +
Preference number: 4 (lower is better)
Translates to: SLKLKTCTTLPVKAGATETCPPQ*MGLAAL
Trigger: CAGTGCAGCGAGACCCATCCACTGTGGAGGACAAGT...CTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341642.9
CDS-3UTR CCA 90 bp CAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCGTCCTCCACAGTGGATaGGTCTCGTGGAACTGTGCA +
Preference number: 4 (lower is better)
Translates to: QQMRRAAEDRLTETPLCCVLHSG*VSWNCA
Trigger: TGCACAGTTCCACGAGACCCATCCACTGTGGAGGAC...GCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381362.8
CDS-3UTR TCA 90 bp TCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCCCATGCAGCTCCGATaGGAACACAAAGCGTTCCTC +
Preference number: 4 (lower is better)
Translates to: STNEKGSRGQIDRNPTMLPMQLR*EHKAFL
Trigger: GAGGAACGCTTTGTGTTCTCATCGGAGCTGCATGGG...CAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp TTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGACCCATGCAGCTCCGATaGGAACACAAAGCGTTCCTC +
Preference number: 4 (lower is better)
Translates to: FPEVKNMHHTSGKGWSHRPMQLR*EHKAFL
Trigger: GAGGAACGCTTTGTGTTCTCATCGGAGCTGCATGGG...TCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp AGGCAAGACAAACTTTGGTTTCTTTTGGCTTGCCAGGCCCCACTCCCGGAGCTTATCCTTTCCATAAGGTaGGGCATGCAGGTCACTTTG +
Preference number: 4 (lower is better)
Translates to: RQDKLWFLLACQAPLPELILSIR*GMQVTL
Trigger: CAAAGTGACCTGCATGCCTCACCTTATGGAAAGGAT...AAGCTCCGGGAGTGGGGCCTGGCAAGCCAAAAGAAACCAAAGTTTGTCTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR TCA 90 bp TTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAAGGCAGCTTGGAGGCTaGCTTTCATGTCCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: LLSRSHQQMRRAAEDRLTRQLGG*LSCPVG
Trigger: ACCCACTGGACATGAAAGTCAGCCTCCAAGCTGCCT...TGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp GAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGGCACCATTCCCGTCCACACTaGCGTTCAGGGAACTTACAA +
Preference number: 4 (lower is better)
Translates to: EVKNMHHTSGKGWSHRGHHSRPH*RSGNLQ
Trigger: TTGTAAGTTCCCTGAACGTCAGTGTGGACGGGAATG...GTGCCCTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp CACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGCATTCCCGTCCACACTaGCGTTCAGGGAACTTACAA +
Preference number: 4 (lower is better)
Translates to: HLASLLSRSHQQMRRAAEHSRPH*RSGNLQ
Trigger: TTGTAAGTTCCCTGAACGTCAGTGTGGACGGGAATG...CTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp GAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGGCACCATGAACATCTGAACTaGGAACCGGCTTTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: EVKNMHHTSGKGWSHRGHHEHLN*EPAFRG
Trigger: TCCTCGGAAAGCCGGTTCTCAGTTCAGATGTTCATG...GTGCCCTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp TCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGGCGGACTTGACTTCTTaGGCAAGAAGGCTGGCACTG +
Preference number: 4 (lower is better)
Translates to: STNEKGSRGQIDRNPTMLADLTS*ARRLAL
Trigger: CAGTGCCAGCCTTCTTGCTCAAGAAGTCAAGTCCGC...CAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp TCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGGTGCACCTCTCCGAGTaGTGGGCCCCAAATCTAGAA +
Preference number: 4 (lower is better)
Translates to: STNEKGSRGQIDRNPTMLVHLSE*WAPNLE
Trigger: TTCTAGATTTGGGGCCCATCACTCGGAGAGGTGCAC...CAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp TTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGTGCACCTCTCCGAGTaGTGGGCCCCAAATCTAGAA +
Preference number: 4 (lower is better)
Translates to: FPEVKNMHHTSGKGWSHRVHLSE*WAPNLE
Trigger: TTCTAGATTTGGGGCCCATCACTCGGAGAGGTGCAC...TCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp GTCTCCAGAAAGGGACTTCACCCATCTCCTAGGCTTTGCAGTTTCATTCCCATAGGAAAGCAGAAGTGCTaGAGGGAGCCATTGCCAGAG +
Preference number: 4 (lower is better)
Translates to: VSRKGLHPSPRLCSFIPIGKQKC*REPLPE
Trigger: CTCTGGCAATGGCTCCCTTCAGCACTTCTGCTTTCC...TATGGGAATGAAACTGCAAAGCCTAGGAGATGGGTGAAGTCCCTTTCTGGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR TCA 90 bp AAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCCTGATTTTGAACTGCTaGCCTCAGGTGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: KVPSTNEKGSRGQIDRNPLILNC*PQVIHL
Trigger: CAGGTGGATCACCTGAGGTCAGCAGTTCAAAATCAG...GGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp AGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCTGATTTTGAACTGCTaGCCTCAGGTGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: RAPSKLAFKVPSTNEKGSLILNC*PQVIHL
Trigger: CAGGTGGATCACCTGAGGTCAGCAGTTCAAAATCAG...GCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp CACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGCAGCCGAGGACAGATTaGCAGAAACCCCACTATGTT +
Preference number: 4 (lower is better)
Translates to: HLASLLSRSHQQMRRAAEQPRTD*QKPHYV
Trigger: AACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTG...CTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp AGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCAGCCGAGGACAGATTaGCAGAAACCCCACTATGTT +
Preference number: 4 (lower is better)
Translates to: RAPSKLAFKVPSTNEKGSQPRTD*QKPHYV
Trigger: AACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTG...GCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp GTCTCCAGAAAGGGACTTCACCCATCTCCTAGGCTTTGCAGTTTCATTCCCATAGGTCCCATCAACAAATaGGAAGGGCAGCCGAGGACA +
Preference number: 4 (lower is better)
Translates to: VSRKGLHPSPRLCSFIPIGPINK*EGQPRT
Trigger: TGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACC...TATGGGAATGAAACTGCAAAGCCTAGGAGATGGGTGAAGTCCCTTTCTGGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR GCA 90 bp CGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACATAACCTCGCTGCACTaGAGATGCCTGGGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: RFPEVKNMHHTSGKGWSHITSLH*RCLGQN
Trigger: ATTCTGACCCAGGCATCTGCAGTGCAGCGAGGTTAT...GTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302555.10
ENST00000381362.8
CDS-3UTR GCA 90 bp AGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCATAACCTCGCTGCACTaGAGATGCCTGGGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: RAPSKLAFKVPSTNEKGSITSLH*RCLGQN
Trigger: ATTCTGACCCAGGCATCTGCAGTGCAGCGAGGTTAT...GCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302555.10
ENST00000381362.8
CDS-3UTR GCA 90 bp AGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCGATTACACCAGGGAGTaGCTTCCAACCGGTACACAT +
Preference number: 4 (lower is better)
Translates to: RAPSKLAFKVPSTNEKGSDYTRE*LPTGTH
Trigger: ATGTGTACCGGTTGGAAGGCACTCCCTGGTGTAATC...GCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302555.10
ENST00000381362.8
CDS-3UTR GCA 90 bp CAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCTCTGCAAGATGCTGCTaGAGTTTGGGTCTCGCAGGT +
Preference number: 4 (lower is better)
Translates to: QQMRRAAEDRLTETPLCCSARCC*SLGLAG
Trigger: ACCTGCGAGACCCAAACTGCAGCAGCATCTTGCAGA...GCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp CAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCGAACTTACAATGGGCTaGAAGGCAGCTTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: QQMRRAAEDRLTETPLCCELTMG*KAAWRL
Trigger: CAGCCTCCAAGCTGCCTTGCAGCCCATTGTAAGTTC...GCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp TCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGTGGCCGGTACTTCACTaGGGACTTGACTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: SLKLKTCTTLPVKAGATEWPVLH*GLDFLS
Trigger: GCTCAAGAAGTCAAGTCCGCAGTGAAGTACCGGCCA...CTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp GAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGGCACGCTGAAGGGAGCCATTaGCAGAGGGAAGAACACAAA +
Preference number: 4 (lower is better)
Translates to: EVKNMHHTSGKGWSHRGHAEGSH*QREEHK
Trigger: TTTGTGTTCTTCCCTCTGGCAATGGCTCCCTTCAGC...GTGCCCTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp ACCGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAATCTCAACTCACTaGAACCTCCACCCCCTGAGT +
Preference number: 4 (lower is better)
Translates to: TASLKLKTCTTLPVKAGATISTH*NLHPLS
Trigger: ACTCAGGGGGTGGAGGTTGCAGTGAGTTGAGATTGT...GGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp TTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGTGCCTCTTCTCCATaGTCATCCCATACCCCAGTG +
Preference number: 4 (lower is better)
Translates to: FPEVKNMHHTSGKGWSHRGASSP*SSHTPV
Trigger: CACTGGGGTATGGGATGAGCATGGAGAAGAGGCACC...TCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp CAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCAGGAATCGTGGCTGGTaGCTCTTCTCCATGCTCATC +
Preference number: 4 (lower is better)
Translates to: QQMRRAAEDRLTETPLCCRNRGW*LFSMLI
Trigger: GATGAGCATGGAGAAGAGGCACCAGCCACGATTCCT...GCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp CAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCTGGAACTCGCTGCACTaGAGATGCCTGGGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: QQMRRAAEDRLTETPLCCWNSLH*RCLGQN
Trigger: ATTCTGACCCAGGCATCTGCAGTGCAGCGAGTTCCA...GCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS-3UTR CCA 90 bp GAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCTTTTCTTTTGCACTGCAGATGCCTaGGTCAGAATGCAGGAGACC +
Preference number: 4 (lower is better)
Translates to: EKGSRGQIDRNPTMLLFFCTADA*VRMQET
Trigger: GGTCTCCTGCATTCTGACCCAGGCATCTGCAGTGCA...AAAGAAAAGCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp AGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCTTTTTATCGCACCCCTaGGACCCTGCTGAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: RAPSKLAFKVPSTNEKGSFLSHP*DPAEFS
Trigger: AGAGAACTCAGCAGGGTCCCAGGGGTGCGATAAAAA...GCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302555.10
ENST00000381362.8
CDS-3UTR CCA 90 bp TCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGTCCCATTCAGCCACATaGGAGCGTCTGTCTGGCATC +
Preference number: 4 (lower is better)
Translates to: STNEKGSRGQIDRNPTMLSHSAT*ERLSGI
Trigger: GATGCCAGACAGACGCTCCCATGTGGCTGAATGGGA...CAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302555.10
ENST00000381362.8
CDS-3UTR CCA 90 bp TCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCAGTTGCCACTCCAATaGGCACAGGCAGTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: STNEKGSRGQIDRNPTMLQLPLQ*AQAVWL
Trigger: CAACCACACTGCCTGTGCCCATTGGAGTGGCAACTG...CAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302555.10
ENST00000381362.8
CDS-3UTR CCA 90 bp TCTCCATGCTCATCCCATACCCCAGTGACAGGATACCGCTTCCCTGAAGTTAAAGTCCTCCACAGTGGATaGGTCTGTGCAGTATCTCAG +
Preference number: 4 (lower is better)
Translates to: SPCSSHTPVTGYRFPEVKVLHSG*VCAVSQ
Trigger: CTGAGATACTGCACAGACCCATCCACTGTGGAGGAC...TTTAACTTCAGGGAAGCGGTATCCTGTCACTGGGGTATGGGATGAGCATGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CCA 90 bp AGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCACTTGTCCTCCACAGTaGATGGGTCTGTGCAGTATC +
Preference number: 4 (lower is better)
Translates to: RAPSKLAFKVPSTNEKGSTCPPQ*MGLCSI
Trigger: GATACTGCACAGACCCATCCACTGTGGAGGACAAGT...GCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CCA 90 bp AGAGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGATGCTGCTGCAGTTTaGGTCTCGCAGGTAGGCAAT +
Preference number: 4 (lower is better)
Translates to: RGHLASLLSRSHQQMRRADAAAV*VSQVGN
Trigger: ATTGCCTACCTGCGAGACCCAAACTGCAGCAGCATC...TGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp TTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGCTGCAAGGCAGCTTaGAGGCTGACTTTCATGTCC +
Preference number: 4 (lower is better)
Translates to: FPEVKNMHHTSGKGWSHRGCKAA*RLTFMS
Trigger: GGACATGAAAGTCAGCCTCCAAGCTGCCTTGCAGCC...TCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp GAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGGCACTCAGGGAACTTACAATaGGCTGCAAGGCAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: EVKNMHHTSGKGWSHRGHSGNLQ*AARQLG
Trigger: TCCAAGCTGCCTTGCAGCCCATTGTAAGTTCCCTGA...GTGCCCTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp CGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACTCAGGGAACTTACAATaGGCTGCAAGGCAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: RFPEVKNMHHTSGKGWSHSGNLQ*AARQLG
Trigger: TCCAAGCTGCCTTGCAGCCCATTGTAAGTTCCCTGA...GTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp AAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCTCAGGGAACTTACAATaGGCTGCAAGGCAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: KVPSTNEKGSRGQIDRNPSGNLQ*AARQLG
Trigger: TCCAAGCTGCCTTGCAGCCCATTGTAAGTTCCCTGA...GGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp ACCGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCTGTCTTCAGTGGGGGTaGCATAGCAGTTCCTCAACA +
Preference number: 4 (lower is better)
Translates to: TASLKLKTCTTLPVKAGACLQWG*HSSSST
Trigger: TGTTGAGGAACTGCTATGCCACCCCCACTGAAGACA...GGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp CGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACCCTCCACGTGGATGGTaGAATCACGTTGATTTGAGC +
Preference number: 4 (lower is better)
Translates to: RFPEVKNMHHTSGKGWSHPPRGW*NHVDLS
Trigger: GCTCAAATCAACGTGATTCCACCATCCACGTGGAGG...GTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp AAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCCCTCCACGTGGATGGTaGAATCACGTTGATTTGAGC +
Preference number: 4 (lower is better)
Translates to: KVPSTNEKGSRGQIDRNPPPRGW*NHVDLS
Trigger: GCTCAAATCAACGTGATTCCACCATCCACGTGGAGG...GGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp TTTTGGCTTGCCAGGCCCCACTCCCGGAGCTTGTGCAGCCTGGATGTATCTCTTCTTGAGCAAGAAGGCTaGCACTGTTCATTAAGAGAA +
Preference number: 4 (lower is better)
Translates to: FWLARPHSRSLCSLDVSLLEQEG*HCSLRE
Trigger: TTCTCTTAATGAACAGTGCCAGCCTTCTTGCTCAAG...AAGAGATACATCCAGGCTGCACAAGCTCCGGGAGTGGGGCCTGGCAAGCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CCA 90 bp GAGCTTGTGCAGCCTGGATGTATCTCTTGCACTGGAACTTTGTGCTCTTATGTCACTTCCGGTAAAGGCTaGAGCCACAGAGGGCACCTA +
Preference number: 4 (lower is better)
Translates to: ELVQPGCISCTGTLCSYVTSGKG*SHRGHL
Trigger: TAGGTGCCCTCTGTGGCTCCAGCCTTTACCGGAAGT...GACATAAGAGCACAAAGTTCCAGTGCAAGAGATACATCCAGGCTGCACAAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CCA 90 bp GAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCTTTTCTTTGGAAGGAATCGTGGCTaGTGCCTCTTCTCCATGCTC +
Preference number: 4 (lower is better)
Translates to: EKGSRGQIDRNPTMLLFFGRNRG*CLFSML
Trigger: GAGCATGGAGAAGAGGCACCAGCCACGATTCCTTCC...AAAGAAAAGCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp AGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCTTAGGAAGGAATCGTaGCTGGTGCCTCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: RAPSKLAFKVPSTNEKGSLRKES*LVPLLH
Trigger: ATGGAGAAGAGGCACCAGCCACGATTCCTTCCTAAG...GCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp AAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCCTTAGGAAGGAATCGTaGCTGGTGCCTCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: KVPSTNEKGSRGQIDRNPLRKES*LVPLLH
Trigger: ATGGAGAAGAGGCACCAGCCACGATTCCTTCCTAAG...GGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp AGAGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAAGCATGTCTGTGGTATaGTGGGGGATAGGGGAGCTA +
Preference number: 4 (lower is better)
Translates to: RGHLASLLSRSHQQMRRASMSVV*WGIGEL
Trigger: TAGCTCCCCTATCCCCCACCATACCACAGACATGCT...TGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CCA 90 bp ACCGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCAACTTTGGTTTCTTTTaGCTTGCCAGGCCCCACTCC +
Preference number: 4 (lower is better)
Translates to: TASLKLKTCTTLPVKAGANFGFF*LARPHS
Trigger: GGAGTGGGGCCTGGCAAGCCAAAAGAAACCAAAGTT...GGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CCA 90 bp CAAACTTTGGTTTCTTTTGGCTTGCCAGGCCCCACTCCCGGAGCTTGTGCAGCCAGGCAAGACAAACTTTaGTTTCTTTTGGCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: QTLVSFGLPGPTPGACAARQDKL*FLLACQ
Trigger: CTGGCAAGCCAAAAGAAACCAAAGTTTGTCTTGCCT...GGCTGCACAAGCTCCGGGAGTGGGGCCTGGCAAGCCAAAAGAAACCAAAGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CCA 90 bp TCTCCATGCTCATCCCATACCCCAGTGACAGGATACCGCTTCCCTGAAGTTAAAACTTGTCCTCCACAGTaGATGGGTCTCGTGGAACTC +
Preference number: 4 (lower is better)
Translates to: SPCSSHTPVTGYRFPEVKTCPPQ*MGLVEL
Trigger: GAGTTCCACGAGACCCATCCACTGTGGAGGACAAGT...TTTAACTTCAGGGAAGCGGTATCCTGTCACTGGGGTATGGGATGAGCATGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS-3UTR TCA 90 bp GGCCTTATCTGTAGCTGTGGGAAGGGCGTAAGTCAGTGTACACATGTCAGCATCGGACATCAGAACTATTaGGGTCCTGTCTGCAGAAAC +
Preference number: 4 (lower is better)
Translates to: GLICSCGKGVSQCTHVSIGHQNY*GPVCRN
Trigger: GTTTCTGCAGACAGGACCTCAATAGTTCTGATGTCC...GATGCTGACATGTGTACACTGACTTACGCCCTTCCCACAGCTACAGATAAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR TCA 90 bp CAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCCATGAACATCTGAACTaGGAACCGGCTTTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: QQMRRAAEDRLTETPLCCHEHLN*EPAFRG
Trigger: TCCTCGGAAAGCCGGTTCTCAGTTCAGATGTTCATG...GCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp CGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACGCAAACATGAACATCTaGACTGAGAACCGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: RFPEVKNMHHTSGKGWSHANMNI*TENRLS
Trigger: GGAAAGCCGGTTCTCAGTTCAGATGTTCATGTTTGC...GTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp AAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCGCAAACATGAACATCTaGACTGAGAACCGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: KVPSTNEKGSRGQIDRNPANMNI*TENRLS
Trigger: GGAAAGCCGGTTCTCAGTTCAGATGTTCATGTTTGC...GGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp GGCACCTGCTGGTCCACCTTGGTTCCTGATGTGTCTCTGAGGCCAACTTTGCGAAGAGAATCACAGAGATaGATCTCACAATGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: GTCWSTLVPDVSLRPTLRRESQR*ISQCRK
Trigger: TTTCCTGCATTGTGAGATTCATCTCTGTGATTCTCT...TCGCAAAGTTGGCCTCAGAGACACATCAGGAACCAAGGTGGACCAGCAGGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR TCA 90 bp TCTCCATGCTCATCCCATACCCCAGTGACAGGATACCGCTTCCCTGAAGTTAAAACTTCACTGCGGACTTaGCTTCTTGAGCAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: SPCSSHTPVTGYRFPEVKTSLRT*LLEQEG
Trigger: GCCTTCTTGCTCAAGAAGTCAAGTCCGCAGTGAAGT...TTTAACTTCAGGGAAGCGGTATCCTGTCACTGGGGTATGGGATGAGCATGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp AGAGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAACTTCACTGCGGACTTaGCTTCTTGAGCAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: RGHLASLLSRSHQQMRRATSLRT*LLEQEG
Trigger: GCCTTCTTGCTCAAGAAGTCAAGTCCGCAGTGAAGT...TGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp AGAGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCACTGATTTTGAACTGCTaGCCTCAGGTGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: RGHLASLLSRSHQQMRRALILNC*PQVIHL
Trigger: CAGGTGGATCACCTGAGGTCAGCAGTTCAAAATCAG...TGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp AGTTCTTCCTGGAGCAGAGTCTCCAAAAGTGGCCCTTTGACATGTTCCCATGGCTCAGAGGAAGCAGAGTaGACACAAGGGTCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: SSSWSRVSKSGPLTCSHGSEEAE*TQGSVS
Trigger: AGAAACTGACCCTTGTGTTCACTCTGCTTCCTCTGA...GCCATGGGAACATGTCAAAGGGCCACTTTTGGAGACTCTGCTCCAGGAAGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR TCA 90 bp GAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGGCACAGGTACTCCCTTGGGTaGTGGAGTTTCTGCATCAAA +
Preference number: 4 (lower is better)
Translates to: EVKNMHHTSGKGWSHRGHRYSLG*WSFCIK
Trigger: TTTGATGCAGAAACTCCATCACCCAAGGGAGTACCT...GTGCCCTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR TCA 90 bp ACCGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCATGCCTGTGTATGTGTaGTGCCCTATTTGCTGCATC +
Preference number: 4 (lower is better)
Translates to: TASLKLKTCTTLPVKAGAMPVYV*CPICCI
Trigger: GATGCAGCAAATAGGGCATCACACATACACAGGCAT...GGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR TCA 90 bp TGTATGTGTGATGCCCTATTTGCTGCATCTGTGTCGGGTGCTTTGAAGTACTCATTCCTGATGTGTCTCTaGGGCCAACTTTGCGAGGCC +
Preference number: 4 (lower is better)
Translates to: CMCDALFAASVSGALKYSFLMCL*GQLCEA
Trigger: GGCCTCGCAAAGTTGGCCTCAGAGACACATCAGGAA...TGAGTACTTCAAAGCACCCGACACAGATGCAGCAAATAGGGCATCACACATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR TCA 90 bp GAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGGCACCAACTACACCATCTCTaGACAAGGCAGCACATTGGA +
Preference number: 4 (lower is better)
Translates to: EVKNMHHTSGKGWSHRGHQLHHL*TRQHIG
Trigger: TCCAATGTGCTGCCTTGTTCAGAGATGGTGTAGTTG...GTGCCCTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR TCA 90 bp GAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCTTTTCTTTCTGTGTGCTGAATGCTaGACATGCTGGGCACTGCTT +
Preference number: 4 (lower is better)
Translates to: EKGSRGQIDRNPTMLLFFLCAEC*TCWALL
Trigger: AAGCAGTGCCCAGCATGTTCAGCATTCAGCACACAG...AAAGAAAAGCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS-3UTR TCA 90 bp TCTCCATGCTCATCCCATACCCCAGTGACAGGATACCGCTTCCCTGAAGTTAAAAATAGTGCTGTGTGCTaGATGCTGAACATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SPCSSHTPVTGYRFPEVKNSAVC*MLNMLG
Trigger: GCCCAGCATGTTCAGCATTCAGCACACAGCACTATT...TTTAACTTCAGGGAAGCGGTATCCTGTCACTGGGGTATGGGATGAGCATGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS-3UTR GCA 90 bp CACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGTATGCAGACTTCCCATaGAGCTCCGATGAGAACACA +
Preference number: 4 (lower is better)
Translates to: HLASLLSRSHQQMRRAAEYADFP*SSDENT
Trigger: TGTGTTCTCATCGGAGCTGCATGGGAAGTCTGCATA...CTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp AGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCGCATGCAGGTCACTTTaGTGTATGCAGACTTCCCAT +
Preference number: 4 (lower is better)
Translates to: RAPSKLAFKVPSTNEKGSACRSL*CMQTSH
Trigger: ATGGGAAGTCTGCATACAGCAAAGTGACCTGCATGC...GCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp GTCTCCAGAAAGGGACTTCACCCATCTCCTAGGCTTTGCAGTTTCATTCCCATATCCAGAAACAGCAGTTaGCACTCCAATGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: VSRKGLHPSPRLCSFIPISRNSS*HSNGHR
Trigger: CCTGTGCCCATTGGAGTGGCAACTGCTGTTTCTGGA...TATGGGAATGAAACTGCAAAGCCTAGGAGATGGGTGAAGTCCCTTTCTGGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR GCA 90 bp TTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACATCCAGAAACAGCAGTTaGCACTCCAATGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: LLSRSHQQMRRAAEDRLTSRNSS*HSNGHR
Trigger: CCTGTGCCCATTGGAGTGGCAACTGCTGTTTCTGGA...TGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302555.10
ENST00000381362.8
CDS-3UTR GCA 90 bp TTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGACCTCTGTCTGCAAGATaGTGCTGCAGTTTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: FPEVKNMHHTSGKGWSHRPLSAR*CCSLGL
Trigger: GAGACCCAAACTGCAGCAGCATCTTGCAGACAGAGG...TCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp TTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAACTTACAATGGGCTaGAAGGCAGCTTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LLSRSHQQMRRAAEDRLTELTMG*KAAWRL
Trigger: CAGCCTCCAAGCTGCCTTGCAGCCCATTGTAAGTTC...TGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp TTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACATGGCCGGTACTTCACTaGGGACTTGACTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: LLSRSHQQMRRAAEDRLTWPVLH*GLDFLS
Trigger: GCTCAAGAAGTCAAGTCCGCAGTGAAGTACCGGCCA...TGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp AGAGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAAACTTCAAGGCCAGATaGTCAGCGGAGCTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: RGHLASLLSRSHQQMRRANFKAR*SAELSE
Trigger: TTCTGAGAGCTCCGCTGAGCATCTGGCCTTGAAGTT...TGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp TCTCCATGCTCATCCCATACCCCAGTGACAGGATACCGCTTCCCTGAAGTTAAAAACTTCAAGGCCAGATaGTCAGCGGAGCTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: SPCSSHTPVTGYRFPEVKNFKAR*SAELSE
Trigger: TTCTGAGAGCTCCGCTGAGCATCTGGCCTTGAAGTT...TTTAACTTCAGGGAAGCGGTATCCTGTCACTGGGGTATGGGATGAGCATGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp CGGAGCTTGTGCAGCCTGGATGTATCTCTTGCACTGGAACTTTGTGCTCTTATGGCTGAAGGGAGCCATTaGCAGAGGGAAGAACACAAA +
Preference number: 4 (lower is better)
Translates to: RSLCSLDVSLALELCALMAEGSH*QREEHK
Trigger: TTTGTGTTCTTCCCTCTGGCAATGGCTCCCTTCAGC...CATAAGAGCACAAAGTTCCAGTGCAAGAGATACATCCAGGCTGCACAAGCTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR GCA 90 bp CAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCACAATCTCAACTCACTaGAACCTCCACCCCCTGAGT +
Preference number: 4 (lower is better)
Translates to: QQMRRAAEDRLTETPLCCTISTH*NLHPLS
Trigger: ACTCAGGGGGTGGAGGTTGCAGTGAGTTGAGATTGT...GCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp TCTCCATGCTCATCCCATACCCCAGTGACAGGATACCGCTTCCCTGAAGTTAAAACAATCTCAACTCACTaGAACCTCCACCCCCTGAGT +
Preference number: 4 (lower is better)
Translates to: SPCSSHTPVTGYRFPEVKTISTH*NLHPLS
Trigger: ACTCAGGGGGTGGAGGTTGCAGTGAGTTGAGATTGT...TTTAACTTCAGGGAAGCGGTATCCTGTCACTGGGGTATGGGATGAGCATGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp ACATTGGAACGTCTCCTCCAAGCAGATACACAGGCTCGGCACCTGCTGGTCCACCTGAAGTTAAAAACATaGACCACACTTCCGGTAAAG +
Preference number: 4 (lower is better)
Translates to: TLERLLQADTQARHLLVHLKLKT*TTLPVK
Trigger: CTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAG...GTGGACCAGCAGGTGCCGAGCCTGTGTATCTGCTTGGAGGAGACGTTCCAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR GCA 90 bp GATGCCCTATTTGCTGCATCTGTGTCGGGTGCTTTGAAGTACTCATTAAAGGTCGGTGCCTCTTCTCCATaGTCATCCCATACCCCAGTG +
Preference number: 4 (lower is better)
Translates to: DALFAASVSGALKYSLKVGASSP*SSHTPV
Trigger: CACTGGGGTATGGGATGAGCATGGAGAAGAGGCACC...GACCTTTAATGAGTACTTCAAAGCACCCGACACAGATGCAGCAAATAGGGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR GCA 90 bp GGCACCTGCTGGTCCACCTTGGTTCCTGATGTGTCTCTGAGGCCAACTTTGCGATGCATCTGTGTCGGGTaGTTTGAAGTACTCATTAAA +
Preference number: 4 (lower is better)
Translates to: GTCWSTLVPDVSLRPTLRCICVG*FEVLIK
Trigger: TTTAATGAGTACTTCAAAGCACCCGACACAGATGCA...TCGCAAAGTTGGCCTCAGAGACACATCAGGAACCAAGGTGGACCAGCAGGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR GCA 90 bp GAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGGCACGGTCTCGTGGAACTGTaGAGTATCTCAGATTACACC +
Preference number: 4 (lower is better)
Translates to: EVKNMHHTSGKGWSHRGHGLVEL*SISDYT
Trigger: GGTGTAATCTGAGATACTGCACAGTTCCACGAGACC...GTGCCCTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381362.8
CDS-3UTR GCA 90 bp CAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCCATGGGAATGCAGCCTaGTGTGGGCCGTCTTTTTAT +
Preference number: 4 (lower is better)
Translates to: QQMRRAAEDRLTETPLCCHGNAA*CGPSFY
Trigger: ATAAAAAGACGGCCCACAGCAGGCTGCATTCCCATG...GCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS-3UTR CCA 90 bp ATTCCTCCAGCATCTAGGTCCCAAGGATGTTTGTGTAGTTCTCTAAGTCACAGCTGCACTGCAGATGCCTaGGTCAGAATGCAGGAGACC +
Preference number: 4 (lower is better)
Translates to: IPPASRSQGCLCSSLSHSCTADA*VRMQET
Trigger: GGTCTCCTGCATTCTGACCCAGGCATCTGCAGTGCA...GCTGTGACTTAGAGAACTACACAAACATCCTTGGGACCTAGATGCTGGAGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CCA 90 bp AGAGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCATTTTTATCGCACCCCTaGGACCCTGCTGAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: RGHLASLLSRSHQQMRRAFLSHP*DPAEFS
Trigger: AGAGAACTCAGCAGGGTCCCAGGGGTGCGATAAAAA...TGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302555.10
ENST00000381362.8
CDS-3UTR CCA 90 bp TGTATGTGTGATGCCCTATTTGCTGCATCTGTGTCGGGTGCTTTGAAGTACTCATCCCATTCAGCCACATaGGAGCGTCTGTCTGGCATC +
Preference number: 4 (lower is better)
Translates to: CMCDALFAASVSGALKYSSHSAT*ERLSGI
Trigger: GATGCCAGACAGACGCTCCCATGTGGCTGAATGGGA...TGAGTACTTCAAAGCACCCGACACAGATGCAGCAAATAGGGCATCACACATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CCA 90 bp GAGCTTGTGCAGCCTGGATGTATCTCTTGCACTGGAACTTTGTGCTCTTATGTCGATGCTGCTGCAGTTTaGGTCTCGCAGGTAGGCAAT +
Preference number: 4 (lower is better)
Translates to: ELVQPGCISCTGTLCSYVDAAAV*VSQVGN
Trigger: ATTGCCTACCTGCGAGACCCAAACTGCAGCAGCATC...GACATAAGAGCACAAAGTTCCAGTGCAAGAGATACATCCAGGCTGCACAAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CCA 90 bp TCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGTGTCTTCAGTGGGGGTaGCATAGCAGTTCCTCAACA +
Preference number: 4 (lower is better)
Translates to: SLKLKTCTTLPVKAGATECLQWG*HSSSST
Trigger: TGTTGAGGAACTGCTATGCCACCCCCACTGAAGACA...CTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp CAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCTGTCTTCAGTGGGGGTaGCATAGCAGTTCCTCAACA +
Preference number: 4 (lower is better)
Translates to: QQMRRAAEDRLTETPLCCCLQWG*HSSSST
Trigger: TGTTGAGGAACTGCTATGCCACCCCCACTGAAGACA...GCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp GAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGGCACTCTCCTCCACGTGGATaGTGGAATCACGTTGATTTG +
Preference number: 4 (lower is better)
Translates to: EVKNMHHTSGKGWSHRGHSPPRG*WNHVDL
Trigger: CAAATCAACGTGATTCCACCATCCACGTGGAGGAGA...GTGCCCTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp TGTATGTGTGATGCCCTATTTGCTGCATCTGTGTCGGGTGCTTTGAAGTACTCAGGAAGGAATCGTGGCTaGTGCCTCTTCTCCATGCTC +
Preference number: 4 (lower is better)
Translates to: CMCDALFAASVSGALKYSGRNRG*CLFSML
Trigger: GAGCATGGAGAAGAGGCACCAGCCACGATTCCTTCC...TGAGTACTTCAAAGCACCCGACACAGATGCAGCAAATAGGGCATCACACATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CCA 90 bp TTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAACTTGTCCTCCACAGTaGATGGGTCTCGTGGAACTG +
Preference number: 4 (lower is better)
Translates to: LLSRSHQQMRRAAEDRLTTCPPQ*MGLVEL
Trigger: CAGTTCCACGAGACCCATCCACTGTGGAGGACAAGT...TGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381362.8
CDS-3UTR TCA 90 bp AGAGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGGACATCAGAACTATTaGGGTCCTGTCTGCAGAAAC +
Preference number: 4 (lower is better)
Translates to: RGHLASLLSRSHQQMRRAGHQNY*GPVCRN
Trigger: GTTTCTGCAGACAGGACCTCAATAGTTCTGATGTCC...TGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp GAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCTTTTCTTTCATTCCCGTCCACACTaGCGTTCAGGGAACTTACAA +
Preference number: 4 (lower is better)
Translates to: EKGSRGQIDRNPTMLLFFHSRPH*RSGNLQ
Trigger: TTGTAAGTTCCCTGAACGTCAGTGTGGACGGGAATG...AAAGAAAAGCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp TTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACACATTCCCGTCCACACTaGCGTTCAGGGAACTTACAA +
Preference number: 4 (lower is better)
Translates to: LLSRSHQQMRRAAEDRLTHSRPH*RSGNLQ
Trigger: TTGTAAGTTCCCTGAACGTCAGTGTGGACGGGAATG...TGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp GAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGGCACATGGTGGAATCACGTTaGTTTGAGCAGCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: EVKNMHHTSGKGWSHRGHMVESR*FEQLFL
Trigger: CAGAAACAGCTGCTCAAATCAACGTGATTCCACCAT...GTGCCCTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp TTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGACATGAACATCTGAACTaGGAACCGGCTTTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: FPEVKNMHHTSGKGWSHRHEHLN*EPAFRG
Trigger: TCCTCGGAAAGCCGGTTCTCAGTTCAGATGTTCATG...TCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp TCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGCAAACATGAACATCTaGACTGAGAACCGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: SLKLKTCTTLPVKAGATEANMNI*TENRLS
Trigger: GGAAAGCCGGTTCTCAGTTCAGATGTTCATGTTTGC...CTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp TCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGACTTCACTGCGGACTTaGCTTCTTGAGCAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: STNEKGSRGQIDRNPTMLTSLRT*LLEQEG
Trigger: GCCTTCTTGCTCAAGAAGTCAAGTCCGCAGTGAAGT...CAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp GAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCTTTTCTTTACTTCACTGCGGACTTaGCTTCTTGAGCAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: EKGSRGQIDRNPTMLLFFTSLRT*LLEQEG
Trigger: GCCTTCTTGCTCAAGAAGTCAAGTCCGCAGTGAAGT...AAAGAAAAGCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp GAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCTTTTCTTTCAGCCGAGGACAGATTaGCAGAAACCCCACTATGTT +
Preference number: 4 (lower is better)
Translates to: EKGSRGQIDRNPTMLLFFQPRTD*QKPHYV
Trigger: AACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTG...AAAGAAAAGCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp AGAGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCATATGCAGACTTCCCATaGAGCTCCGATGAGAACACA +
Preference number: 4 (lower is better)
Translates to: RGHLASLLSRSHQQMRRAYADFP*SSDENT
Trigger: TGTGTTCTCATCGGAGCTGCATGGGAAGTCTGCATA...TGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp AGAGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCATGCAGGTCACTTTaGTGTATGCAGACTTCCCAT +
Preference number: 4 (lower is better)
Translates to: RGHLASLLSRSHQQMRRAACRSL*CMQTSH
Trigger: ATGGGAAGTCTGCATACAGCAAAGTGACCTGCATGC...TGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp TTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACACTGCTGAGTTCTCTGTaGTTCGGAAGGGTTCATCCA +
Preference number: 4 (lower is better)
Translates to: LLSRSHQQMRRAAEDRLTLLSSL*FGRVHP
Trigger: TGGATGAACCCTTCCGAAGCACAGAGAACTCAGCAG...TGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302555.10
ENST00000381362.8
CDS-3UTR GCA 90 bp TTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGATTACACCAGGGAGTaGCTTCCAACCGGTACACAT +
Preference number: 4 (lower is better)
Translates to: LLSRSHQQMRRAAEDRLTDYTRE*LPTGTH
Trigger: ATGTGTACCGGTTGGAAGGCACTCCCTGGTGTAATC...TGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302555.10
ENST00000381362.8
CDS-3UTR GCA 90 bp GATGCCCTATTTGCTGCATCTGTGTCGGGTGCTTTGAAGTACTCATTAAAGGTCCCTCTGTCTGCAAGATaGTGCTGCAGTTTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: DALFAASVSGALKYSLKVPLSAR*CCSLGL
Trigger: GAGACCCAAACTGCAGCAGCATCTTGCAGACAGAGG...GACCTTTAATGAGTACTTCAAAGCACCCGACACAGATGCAGCAAATAGGGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR GCA 90 bp TTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAAACTTCAAGGCCAGATaGTCAGCGGAGCTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: LLSRSHQQMRRAAEDRLTNFKAR*SAELSE
Trigger: TTCTGAGAGCTCCGCTGAGCATCTGGCCTTGAAGTT...TGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp TTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGCTGAAGGGAGCCATTaGCAGAGGGAAGAACACAAA +
Preference number: 4 (lower is better)
Translates to: LLSRSHQQMRRAAEDRLTAEGSH*QREEHK
Trigger: TTTGTGTTCTTCCCTCTGGCAATGGCTCCCTTCAGC...TGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp GTCTCCAGAAAGGGACTTCACCCATCTCCTAGGCTTTGCAGTTTCATTCCCATAGCAGGACTGGTGCATTaGTTCTGTTGGGACTTCTTG +
Preference number: 4 (lower is better)
Translates to: VSRKGLHPSPRLCSFIPIAGLVH*FCWDFL
Trigger: CAAGAAGTCCCAACAGAAGCAATGCACCAGTCCTGC...TATGGGAATGAAACTGCAAAGCCTAGGAGATGGGTGAAGTCCCTTTCTGGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR GCA 90 bp GAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGGCACTCTCTCCTCAATTGGTaGACAGGTATGATGGGAGTT +
Preference number: 4 (lower is better)
Translates to: EVKNMHHTSGKGWSHRGHSLLNW*TGMMGV
Trigger: AACTCCCATCATACCTGTGCACCAATTGAGGAGAGA...GTGCCCTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS-3UTR GCA 90 bp CACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGGGCCGTCTTTTTATTaGAATTTCCCACCCATGTGT +
Preference number: 4 (lower is better)
Translates to: HLASLLSRSHQQMRRAAEGPSFY*NFPPMC
Trigger: ACACATGGGTGGGAAATTGCAATAAAAAGACGGCCC...CTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS-3UTR CCA 90 bp TCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGACGAACTGGCTTCAATaGGGTTTCCATAACCTCGCT +
Preference number: 4 (lower is better)
Translates to: SLKLKTCTTLPVKAGATETNWLQ*GFHNLA
Trigger: AGCGAGGTTATGGAAACCCCATTGAAGCCAGTTCGT...CTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302555.10
ENST00000381362.8
CDS-3UTR CCA 90 bp AGAGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAACGAACTGGCTTCAATaGGGTTTCCATAACCTCGCT +
Preference number: 4 (lower is better)
Translates to: RGHLASLLSRSHQQMRRATNWLQ*GFHNLA
Trigger: AGCGAGGTTATGGAAACCCCATTGAAGCCAGTTCGT...TGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302555.10
ENST00000381362.8
CDS-3UTR CCA 90 bp CACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACTTTCATGTCCAGTaGGTAGGCACATTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: HLASLLSRSHQQMRRAAEDFHVQ*VGTLEV
Trigger: AACTTCCAATGTGCCTACCCACTGGACATGAAAGTC...CTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp ACCGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCGACTTTCATGTCCAGTaGGTAGGCACATTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: TASLKLKTCTTLPVKAGADFHVQ*VGTLEV
Trigger: AACTTCCAATGTGCCTACCCACTGGACATGAAAGTC...GGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp GAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCTTTTCTTTTGTCTTCAGTGGGGGTaGCATAGCAGTTCCTCAACA +
Preference number: 4 (lower is better)
Translates to: EKGSRGQIDRNPTMLLFFCLQWG*HSSSST
Trigger: TGTTGAGGAACTGCTATGCCACCCCCACTGAAGACA...AAAGAAAAGCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp TTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACACCTCCACGTGGATGGTaGAATCACGTTGATTTGAGC +
Preference number: 4 (lower is better)
Translates to: LLSRSHQQMRRAAEDRLTPPRGW*NHVDLS
Trigger: GCTCAAATCAACGTGATTCCACCATCCACGTGGAGG...TGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp TCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGTCTCCTCCACGTGGATaGTGGAATCACGTTGATTTG +
Preference number: 4 (lower is better)
Translates to: SLKLKTCTTLPVKAGATESPPRG*WNHVDL
Trigger: CAAATCAACGTGATTCCACCATCCACGTGGAGGAGA...CTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp CAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCTCTCCTCCACGTGGATaGTGGAATCACGTTGATTTG +
Preference number: 4 (lower is better)
Translates to: QQMRRAAEDRLTETPLCCSPPRG*WNHVDL
Trigger: CAAATCAACGTGATTCCACCATCCACGTGGAGGAGA...GCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp AGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCTGTGTGAATTGGAGTaGAAAGCAGAAGTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: RAPSKLAFKVPSTNEKGSLCELE*KAEVLK
Trigger: CTTCAGCACTTCTGCTTTCCACTCCAATTCACACAG...GCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp CACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGCTGTGTGAATTGGAGTaGAAAGCAGAAGTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: HLASLLSRSHQQMRRAAELCELE*KAEVLK
Trigger: CTTCAGCACTTCTGCTTTCCACTCCAATTCACACAG...CTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp TCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCTTAGGAAGGAATCGTaGCTGGTGCCTCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: STNEKGSRGQIDRNPTMLLRKES*LVPLLH
Trigger: ATGGAGAAGAGGCACCAGCCACGATTCCTTCCTAAG...CAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp TTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACACTTAGGAAGGAATCGTaGCTGGTGCCTCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: LLSRSHQQMRRAAEDRLTLRKES*LVPLLH
Trigger: ATGGAGAAGAGGCACCAGCCACGATTCCTTCCTAAG...TGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp TTTTGGCTTGCCAGGCCCCACTCCCGGAGCTTGTGCAGCCTGGATGTATCTCTTTTTGACATGTTCCCATaGCAATTTTTGGAAACCATG +
Preference number: 4 (lower is better)
Translates to: FWLARPHSRSLCSLDVSLFDMFP*QFLETM
Trigger: CATGGTTTCCAAAAATTGCCATGGGAACATGTCAAA...AAGAGATACATCCAGGCTGCACAAGCTCCGGGAGTGGGGCCTGGCAAGCCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CCA 90 bp ATTCCTCCAGCATCTAGGTCCCAAGGATGTTTGTGTAGTTCTCTAAGTCACAGCGGAGCTTGTGCAGCCTaGATGTATCTCTTGCACTGG +
Preference number: 4 (lower is better)
Translates to: IPPASRSQGCLCSSLSHSGACAA*MYLLHW
Trigger: CCAGTGCAAGAGATACATCCAGGCTGCACAAGCTCC...GCTGTGACTTAGAGAACTACACAAACATCCTTGGGACCTAGATGCTGGAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR CAA 72 bp CCCACTCCCGGAGCTTGTGCAGCCTGGATGTATCTCTaGCACTGGAACTTTGTGCTCTTATGTCCTTATAAT +
Preference number: 4 (lower is better)
Translates to: PTPGACAAWMYL*HWNFVLLCPYN
Trigger: ATTATAAGGACATAAGAGCACAAAGTTCCAGTGCAAGAGATACATCCAGGCTGCACAAGCTCCGGGAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR TCA 90 bp GAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCTTTTCTTTGGACATCAGAACTATTaGGGTCCTGTCTGCAGAAAC +
Preference number: 4 (lower is better)
Translates to: EKGSRGQIDRNPTMLLFFGHQNY*GPVCRN
Trigger: GTTTCTGCAGACAGGACCTCAATAGTTCTGATGTCC...AAAGAAAAGCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp TTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGGACATCAGAACTATTaGGGTCCTGTCTGCAGAAAC +
Preference number: 4 (lower is better)
Translates to: LLSRSHQQMRRAAEDRLTGHQNY*GPVCRN
Trigger: GTTTCTGCAGACAGGACCTCAATAGTTCTGATGTCC...TGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp CACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGGAATCACGTTGATTTaGGCAGCTGTTTCTGATGAT +
Preference number: 4 (lower is better)
Translates to: HLASLLSRSHQQMRRAAEGITLI*AAVSDD
Trigger: ATCATCAGAAACAGCTGCTCAAATCAACGTGATTCC...CTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp CGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACGGAATCACGTTGATTTaGGCAGCTGTTTCTGATGAT +
Preference number: 4 (lower is better)
Translates to: RFPEVKNMHHTSGKGWSHGITLI*AAVSDD
Trigger: ATCATCAGAAACAGCTGCTCAAATCAACGTGATTCC...GTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp AGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCGGAATCACGTTGATTTaGGCAGCTGTTTCTGATGAT +
Preference number: 4 (lower is better)
Translates to: RAPSKLAFKVPSTNEKGSGITLI*AAVSDD
Trigger: ATCATCAGAAACAGCTGCTCAAATCAACGTGATTCC...GCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp TCTCCATGCTCATCCCATACCCCAGTGACAGGATACCGCTTCCCTGAAGTTAAAATGGTGGAATCACGTTaGTTTGAGCAGCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: SPCSSHTPVTGYRFPEVKMVESR*FEQLFL
Trigger: CAGAAACAGCTGCTCAAATCAACGTGATTCCACCAT...TTTAACTTCAGGGAAGCGGTATCCTGTCACTGGGGTATGGGATGAGCATGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp AGAGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAATGGTGGAATCACGTTaGTTTGAGCAGCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: RGHLASLLSRSHQQMRRAMVESR*FEQLFL
Trigger: CAGAAACAGCTGCTCAAATCAACGTGATTCCACCAT...TGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp ACCGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCAATGTCCAGCAAACATaGACATCTGAACTGAGAACC +
Preference number: 4 (lower is better)
Translates to: TASLKLKTCTTLPVKAGANVQQT*TSELRT
Trigger: GGTTCTCAGTTCAGATGTTCATGTTTGCTGGACATT...GGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp AGGCAAGACAAACTTTGGTTTCTTTTGGCTTGCCAGGCCCCACTCCCGGAGCTTTATTTAATCAAGGGATaGGTGAACAGGAAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: RQDKLWFLLACQAPLPELYLIKG*VNRKSW
Trigger: CCAGCTTTTCCTGTTCACTCATCCCTTGATTAAATA...AAGCTCCGGGAGTGGGGCCTGGCAAGCCAAAAGAAACCAAAGTTTGTCTTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR GCA 90 bp TTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGATATGCAGACTTCCCATaGAGCTCCGATGAGAACACA +
Preference number: 4 (lower is better)
Translates to: FPEVKNMHHTSGKGWSHRYADFP*SSDENT
Trigger: TGTGTTCTCATCGGAGCTGCATGGGAAGTCTGCATA...TCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp TCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGTATGCAGACTTCCCATaGAGCTCCGATGAGAACACA +
Preference number: 4 (lower is better)
Translates to: STNEKGSRGQIDRNPTMLYADFP*SSDENT
Trigger: TGTGTTCTCATCGGAGCTGCATGGGAAGTCTGCATA...CAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp TTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGCATGCAGGTCACTTTaGTGTATGCAGACTTCCCAT +
Preference number: 4 (lower is better)
Translates to: LLSRSHQQMRRAAEDRLTACRSL*CMQTSH
Trigger: ATGGGAAGTCTGCATACAGCAAAGTGACCTGCATGC...TGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp ACCGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCAACAGACAGTTCAACTaGATCCCCTTCGTAAGGATT +
Preference number: 4 (lower is better)
Translates to: TASLKLKTCTTLPVKAGANRQFN*IPFVRI
Trigger: AATCCTTACGAAGGGGATGCAGTTGAACTGTCTGTT...GGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp AAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCAACAGACAGTTCAACTaGATCCCCTTCGTAAGGATT +
Preference number: 4 (lower is better)
Translates to: KVPSTNEKGSRGQIDRNPNRQFN*IPFVRI
Trigger: AATCCTTACGAAGGGGATGCAGTTGAACTGTCTGTT...GGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp GATGCCCTATTTGCTGCATCTGTGTCGGGTGCTTTGAAGTACTCATTAAAGGTCACAATCTCAACTCACTaGAACCTCCACCCCCTGAGT +
Preference number: 4 (lower is better)
Translates to: DALFAASVSGALKYSLKVTISTH*NLHPLS
Trigger: ACTCAGGGGGTGGAGGTTGCAGTGAGTTGAGATTGT...GACCTTTAATGAGTACTTCAAAGCACCCGACACAGATGCAGCAAATAGGGCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR GCA 90 bp AGTTCTTCCTGGAGCAGAGTCTCCAAAAGTGGCCCTTTGACATGTTCCCATGGCTCTGTTGGGACTTCTTaGTTAATCCTTCAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: SSSWSRVSKSGPLTCSHGSVGTS*LILQSK
Trigger: CTTGCTCTGAAGGATTAAGCAAGAAGTCCCAACAGA...GCCATGGGAACATGTCAAAGGGCCACTTTTGGAGACTCTGCTCCAGGAAGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR GCA 90 bp GAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCTTTTCTTTTGCTGGGCACTGCTTTaGGTTCTTGACTTCTCACAT +
Preference number: 4 (lower is better)
Translates to: EKGSRGQIDRNPTMLLFFCWALL*VLDFSH
Trigger: ATGTGAGAAGTCAAGAACGCAAAGCAGTGCCCAGCA...AAAGAAAAGCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS-3UTR CCA 90 bp TCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGACTTTCATGTCCAGTaGGTAGGCACATTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: SLKLKTCTTLPVKAGATEDFHVQ*VGTLEV
Trigger: AACTTCCAATGTGCCTACCCACTGGACATGAAAGTC...CTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp TTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGATCTCCTCCACGTGGATaGTGGAATCACGTTGATTTG +
Preference number: 4 (lower is better)
Translates to: FPEVKNMHHTSGKGWSHRSPPRG*WNHVDL
Trigger: CAAATCAACGTGATTCCACCATCCACGTGGAGGAGA...TCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp GAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGGCACCTTGAGCAAGAAGGCTaGCACTGTTCATTAAGAGAA +
Preference number: 4 (lower is better)
Translates to: EVKNMHHTSGKGWSHRGHLEQEG*HCSLRE
Trigger: TTCTCTTAATGAACAGTGCCAGCCTTCTTGCTCAAG...GTGCCCTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp GCGATGCAAAAATACACAGTCATAAAAGGCTATGTGGCTTCAGAAAGAGGAACAAGGCTCGGCACCTGCTaGTCCACCTTGGTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: AMQKYTVIKGYVASERGTRLGTC*STLVPD
Trigger: ATCAGGAACCAAGGTGGACCAGCAGGTGCCGAGCCT...TGTTCCTCTTTCTGAAGCCACATAGCCTTTTATGACTGTGTATTTTTGCATCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CCA 90 bp TCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGGTGTCTCTCCTCAATTaGTGCACAGGTATGATGGGA +
Preference number: 4 (lower is better)
Translates to: STNEKGSRGQIDRNPTMLVSLLN*CTGMMG
Trigger: TCCCATCATACCTGTGCACCAATTGAGGAGAGACAC...CAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS-3UTR CCA 90 bp TTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAATGCAGCCTGCTGTaGGCCGTCTTTTTATTGCAA +
Preference number: 4 (lower is better)
Translates to: LLSRSHQQMRRAAEDRLTECSLL*AVFLLQ
Trigger: TTGCAATAAAAAGACGGCCCACAGCAGGCTGCATTC...TGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS-3UTR TCA 90 bp TCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGATGGTGGAATCACGTTaGTTTGAGCAGCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: STNEKGSRGQIDRNPTMLMVESR*FEQLFL
Trigger: CAGAAACAGCTGCTCAAATCAACGTGATTCCACCAT...CAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp AGAGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAAATGTCCAGCAAACATaGACATCTGAACTGAGAACC +
Preference number: 4 (lower is better)
Translates to: RGHLASLLSRSHQQMRRANVQQT*TSELRT
Trigger: GGTTCTCAGTTCAGATGTTCATGTTTGCTGGACATT...TGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp CGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGAATCACAGAGATaGATCTCACAATGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: RFPEVKNMHHTSGKGWSHRESQR*ISQCRK
Trigger: TTTCCTGCATTGTGAGATTCATCTCTGTGATTCTCT...GTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp TTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACACTTGTTGAGTGGAGGTaGGATAAGCCATTTACGCAA +
Preference number: 4 (lower is better)
Translates to: LLSRSHQQMRRAAEDRLTLVEWR*DKPFTQ
Trigger: TTGCGTAAATGGCTTATCTCACCTCCACTCAACAAG...TGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS-3UTR GCA 90 bp CAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCAACAGACAGTTCAACTaGATCCCCTTCGTAAGGATT +
Preference number: 4 (lower is better)
Translates to: QQMRRAAEDRLTETPLCCNRQFN*IPFVRI
Trigger: AATCCTTACGAAGGGGATGCAGTTGAACTGTCTGTT...GCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp CACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGCTGAAGTTAAAAACATaGACCACACTTCCGGTAAAG +
Preference number: 4 (lower is better)
Translates to: HLASLLSRSHQQMRRAAELKLKT*TTLPVK
Trigger: CTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAG...CTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp AGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCTGAAGTTAAAAACATaGACCACACTTCCGGTAAAG +
Preference number: 4 (lower is better)
Translates to: RAPSKLAFKVPSTNEKGSLKLKT*TTLPVK
Trigger: CTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAG...GCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp TTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACACCTGGATGTATCTCTTaGACTGGAACTTTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: LLSRSHQQMRRAAEDRLTPGCIS*TGTLCS
Trigger: AGAGCACAAAGTTCCAGTGCAAGAGATACATCCAGG...TGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CCA 90 bp ATCTCTTGCACTGGAACTTTGTGCTCTTATGTCCTTATAATTAACTCCCTTTTTCACATGGTACCCGCCTaGGCAGGCCTTCACCAGCAC +
Preference number: 4 (lower is better)
Translates to: ISCTGTLCSYVLIINSLFHMVPA*AGLHQH
Trigger: GTGCTGGTGAAGGCCTGCCCAGGCGGGTACCATGTG...AAAAAGGGAGTTAATTATAAGGACATAAGAGCACAAAGTTCCAGTGCAAGAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CCA 90 bp TCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGGACTTTCATGTCCAGTaGGTAGGCACATTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: STNEKGSRGQIDRNPTMLDFHVQ*VGTLEV
Trigger: AACTTCCAATGTGCCTACCCACTGGACATGAAAGTC...CAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp AGAGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCACTTGAGCAAGAAGGCTaGCACTGTTCATTAAGAGAA +
Preference number: 4 (lower is better)
Translates to: RGHLASLLSRSHQQMRRALEQEG*HCSLRE
Trigger: TTCTCTTAATGAACAGTGCCAGCCTTCTTGCTCAAG...TGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp TCTCCATGCTCATCCCATACCCCAGTGACAGGATACCGCTTCCCTGAAGTTAAACTTGAGCAAGAAGGCTaGCACTGTTCATTAAGAGAA +
Preference number: 4 (lower is better)
Translates to: SPCSSHTPVTGYRFPEVKLEQEG*HCSLRE
Trigger: TTCTCTTAATGAACAGTGCCAGCCTTCTTGCTCAAG...TTTAACTTCAGGGAAGCGGTATCCTGTCACTGGGGTATGGGATGAGCATGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CCA 90 bp ATGGAGTTTCTGCATCAAATTAAGTCATTCCTCCAGCATCTAGGTCCCAAGGATGGGATAGGGGAGCTATaGGGACTAGTTCTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: MEFLHQIKSFLQHLGPKDGIGEL*GLVLPG
Trigger: TCCAGGAAGAACTAGTCCCCATAGCTCCCCTATCCC...ATCCTTGGGACCTAGATGCTGGAGGAATGACTTAATTTGATGCAGAAACTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CCA 90 bp TGCTTCTGTTGGGACTTCTTGCTTAATCCTTCAGAGCAAGCACAGCACTGTTTAAACAAGGCAGCACATTaGAACGTCTCCTCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: CFCWDFLLNPSEQAQHCLNKAAH*NVSSKQ
Trigger: CTGCTTGGAGGAGACGTTCCAATGTGCTGCCTTGTT...TAAACAGTGCTGTGCTTGCTCTGAAGGATTAAGCAAGAAGTCCCAACAGAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR TCA 90 bp GAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCTTTTCTTTAATGTCCAGCAAACATaGACATCTGAACTGAGAACC +
Preference number: 4 (lower is better)
Translates to: EKGSRGQIDRNPTMLLFFNVQQT*TSELRT
Trigger: GGTTCTCAGTTCAGATGTTCATGTTTGCTGGACATT...AAAGAAAAGCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp AGAGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAAGAGAATCACAGAGATaGATCTCACAATGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: RGHLASLLSRSHQQMRRARESQR*ISQCRK
Trigger: TTTCCTGCATTGTGAGATTCATCTCTGTGATTCTCT...TGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR GCA 90 bp GCGATGCAAAAATACACAGTCATAAAAGGCTATGTGGCTTCAGAAAGAGGAACACTGTCTGCAAGATGCTaGTGCAGTTTGGGTCTCGCA +
Preference number: 4 (lower is better)
Translates to: AMQKYTVIKGYVASERGTLSARC*CSLGLA
Trigger: TGCGAGACCCAAACTGCAGCAGCATCTTGCAGACAG...TGTTCCTCTTTCTGAAGCCACATAGCCTTTTATGACTGTGTATTTTTGCATCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR GCA 90 bp AGGCAAGACAAACTTTGGTTTCTTTTGGCTTGCCAGGCCCCACTCCCGGAGCTTTGCACTGGAACTTTGTaGTCTTATGTCCTTATAATT +
Preference number: 4 (lower is better)
Translates to: RQDKLWFLLACQAPLPELCTGTL*SYVLII
Trigger: AATTATAAGGACATAAGAGCACAAAGTTCCAGTGCA...AAGCTCCGGGAGTGGGGCCTGGCAAGCCAAAAGAAACCAAAGTTTGTCTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR GCA 90 bp AGAGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCATCAGCATTGTGCGAATaGTTCCTACAAACAATAGTG +
Preference number: 4 (lower is better)
Translates to: RGHLASLLSRSHQQMRRASALCE*FLQTIV
Trigger: CACTATTGTTTGTAGGAAGCATTCGCACAATGCTGA...TGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS-3UTR CCA 90 bp CAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCGTGAACAGGAAAAGCTaGCTTCAGAGACATAAAAAG +
Preference number: 4 (lower is better)
Translates to: QQMRRAAEDRLTETPLCCVNRKS*LQRHKK
Trigger: CTTTTTATGTCTCTGAAGCCAGCTTTTCCTGTTCAC...GCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR CAA 72 bp ATAGCAGGACTGGTGCATTGCTTCTGTTGGGACTTCTaGCTTAATCCTTCAGAGCAAGCACAGCACTGTTTA +
Preference number: 4 (lower is better)
Translates to: IAGLVHCFCWDF*LNPSEQAQHCL
Trigger: TAAACAGTGCTGTGCTTGCTCTGAAGGATTAAGCAAGAAGTCCCAACAGAAGCAATGCACCAGTCCTGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
3UTR CAA 72 bp TGTGATGCCCTATTTGCTGCATCTGTGTCGGGTGCTTaGAAGTACTCATTAAAGGTCTCCAGAAAGGGACTT +
Preference number: 4 (lower is better)
Translates to: CDALFAASVSGA*KYSLKVSRKGL
Trigger: AAGTCCCTTTCTGGAGACCTTTAATGAGTACTTCAAAGCACCCGACACAGATGCAGCAAATAGGGCATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR TCA 90 bp ATCTCTTGCACTGGAACTTTGTGCTCTTATGTCCTTATAATTAACTCCCTTTTTTGTCCACCTTCACCTTaGTCTCCCTGGGCCCACAGT +
Preference number: 4 (lower is better)
Translates to: ISCTGTLCSYVLIINSLFCPPSP*SPWAHS
Trigger: ACTGTGGGCCCAGGGAGATCAAGGTGAAGGTGGACA...AAAAAGGGAGTTAATTATAAGGACATAAGAGCACAAAGTTCCAGTGCAAGAGAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR TCA 90 bp GAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCTTTTCTTTAGAGAATCACAGAGATaGATCTCACAATGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: EKGSRGQIDRNPTMLLFFRESQR*ISQCRK
Trigger: TTTCCTGCATTGTGAGATTCATCTCTGTGATTCTCT...AAAGAAAAGCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR TCA 90 bp CAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCACTGCTTTGCGTTCTTaGCTTCTCACATTTAATCTT +
Preference number: 4 (lower is better)
Translates to: QQMRRAAEDRLTETPLCCTALRS*LLTFNL
Trigger: AAGATTAAATGTGAGAAGTCAAGAACGCAAAGCAGT...GCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS-3UTR GCA 90 bp GCGATGCAAAAATACACAGTCATAAAAGGCTATGTGGCTTCAGAAAGAGGAACAAACTTCAAGGCCAGATaGTCAGCGGAGCTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: AMQKYTVIKGYVASERGTNFKAR*SAELSE
Trigger: TTCTGAGAGCTCCGCTGAGCATCTGGCCTTGAAGTT...TGTTCCTCTTTCTGAAGCCACATAGCCTTTTATGACTGTGTATTTTTGCATCGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR GCA 90 bp GGATGTATCTCTTGCACTGGAACTTTGTGCTCTTATGTCCTTATAATTAACTCCCACTCCCGGAGCTTGTaGAGCCTGGATGTATCTCTT +
Preference number: 4 (lower is better)
Translates to: GCISCTGTLCSYVLIINSHSRSL*SLDVSL
Trigger: AAGAGATACATCCAGGCTGCACAAGCTCCGGGAGTG...GGAGTTAATTATAAGGACATAAGAGCACAAAGTTCCAGTGCAAGAGATACATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR GCA 90 bp GGATGTATCTCTTGCACTGGAACTTTGTGCTCTTATGTCCTTATAATTAACTCCGGTCACTTTGCTGTATaGAGACTTCCCATGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GCISCTGTLCSYVLIINSGHFAV*RLPMQL
Trigger: GAGCTGCATGGGAAGTCTGCATACAGCAAAGTGACC...GGAGTTAATTATAAGGACATAAGAGCACAAAGTTCCAGTGCAAGAGATACATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CCA 90 bp TGCTTCTGTTGGGACTTCTTGCTTAATCCTTCAGAGCAAGCACAGCACTGTTTAGTGCATTGCTTCTGTTaGGACTTCTTGCTTAATCCT +
Preference number: 4 (lower is better)
Translates to: CFCWDFLLNPSEQAQHCLVHCFC*DFLLNP
Trigger: AGGATTAAGCAAGAAGTCCCAACAGAAGCAATGCAC...TAAACAGTGCTGTGCTTGCTCTGAAGGATTAAGCAAGAAGTCCCAACAGAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CCA 90 bp TGCTTCTGTTGGGACTTCTTGCTTAATCCTTCAGAGCAAGCACAGCACTGTTTACCTGAGAAATTGTGGTaGGTTTCTGTTTCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: CFCWDFLLNPSEQAQHCLPEKLW*VSVSCN
Trigger: GTTGCAAGAAACAGAAACCCACCACAATTTCTCAGG...TAAACAGTGCTGTGCTTGCTCTGAAGGATTAAGCAAGAAGTCCCAACAGAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR TCA 90 bp GGATGTATCTCTTGCACTGGAACTTTGTGCTCTTATGTCCTTATAATTAACTCCGCAAACATGAACATCTaGACTGAGAACCGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: GCISCTGTLCSYVLIINSANMNI*TENRLS
Trigger: GGAAAGCCGGTTCTCAGTTCAGATGTTCATGTTTGC...GGAGTTAATTATAAGGACATAAGAGCACAAAGTTCCAGTGCAAGAGATACATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR GCA 90 bp ATGGAGTTTCTGCATCAAATTAAGTCATTCCTCCAGCATCTAGGTCCCAAGGATTGGGTTTCTGTTTCTTaGAACTACACCATCTCTGAA +
Preference number: 4 (lower is better)
Translates to: MEFLHQIKSFLQHLGPKDWVSVS*NYTISE
Trigger: TTCAGAGATGGTGTAGTTGCAAGAAACAGAAACCCA...ATCCTTGGGACCTAGATGCTGGAGGAATGACTTAATTTGATGCAGAAACTCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR GCA 90 bp ATCTCTTGCACTGGAACTTTGTGCTCTTATGTCCTTATAATTAACTCCCTTTTTGCATGCAGGTCACTTTaGTGTATGCAGACTTCCCAT +
Preference number: 4 (lower is better)
Translates to: ISCTGTLCSYVLIINSLFACRSL*CMQTSH
Trigger: ATGGGAAGTCTGCATACAGCAAAGTGACCTGCATGC...AAAAAGGGAGTTAATTATAAGGACATAAGAGCACAAAGTTCCAGTGCAAGAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CCA 90 bp GCGATGCAAAAATACACAGTCATAAAAGGCTATGTGGCTTCAGAAAGAGGAACAATGTATCTCTTGCACTaGAACTTTGTGCTCTTATGT +
Preference number: 4 (lower is better)
Translates to: AMQKYTVIKGYVASERGTMYLLH*NFVLLC
Trigger: ACATAAGAGCACAAAGTTCCAGTGCAAGAGATACAT...TGTTCCTCTTTCTGAAGCCACATAGCCTTTTATGACTGTGTATTTTTGCATCGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR GCA 90 bp ATCTCTTGCACTGGAACTTTGTGCTCTTATGTCCTTATAATTAACTCCCTTTTTAACAGACAGTTCAACTaGATCCCCTTCGTAAGGATT +
Preference number: 4 (lower is better)
Translates to: ISCTGTLCSYVLIINSLFNRQFN*IPFVRI
Trigger: AATCCTTACGAAGGGGATGCAGTTGAACTGTCTGTT...AAAAAGGGAGTTAATTATAAGGACATAAGAGCACAAAGTTCCAGTGCAAGAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS CCA 90 bp CTCCTCGGGGCGGCAGGCCTTCTCACACTTGTCCTCCACAGTGGATaGGTTGGGCAGGAGCTGAGTCGAGGCTGCTCTGCATCCTCTCCT +
Preference number: 5 (lower is better)
Translates to: LLGAAGLLTLVLHSG*VGQELSRGCSASSP
Trigger: AGGAGAGGATGCAGAGCAGCCTCGACTCAGCTCCTGCCCAACCCATCCACTGTGGAGGACAAGTGTGAGAAGGCCTGCCGCCCCGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573897.5
CDS CCA 90 bp ACTCCTCCTCGGGGCGGCAGGCCTTCTCACACTTGTCCTCCACAGTaGATGGGTTGGGCAGGAGCTGAGTCGAGGCTGCTCTGCATCCTC +
Preference number: 5 (lower is better)
Translates to: TPPRGGRPSHTCPPQ*MGWAGAESRLLCIL
Trigger: GAGGATGCAGAGCAGCCTCGACTCAGCTCCTGCCCAACCCATCCACTGTGGAGGACAAGTGTGAGAAGGCCTGCCGCCCCGAGGAGGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573897.5
CDS CCA 90 bp TCCACAGTGGATGGGTCTCGTGGAACTCGCTGCACTGCAGATGCCTaGGTCAGAATGCAGGAGACCAAGGCCAGCCACAGGAGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: STVDGSRGTRCTADA*VRMQETKASHRRPE
Trigger: CTCTGGCCTCCTGTGGCTGGCCTTGGTCTCCTGCATTCTGACCCAGGCATCTGCAGTGCAGCGAGTTCCACGAGACCCATCCACTGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS-3UTR CAA 90 bp GGCAAGGCACTCCTCCTCGGGGCGGCAGGCCTTCTCACACTTGTCCTCCACAGTCCTCCCAGCAAACATTaGTCCACCTTCACCTTGATC +
Preference number: 5 (lower is better)
Translates to: GKALLLGAAGLLTLVLHSPPSKH*STFTLI
Trigger: GATCAAGGTGAAGGTGGACAAATGTTTGCTGGGAGG...ACTGTGGAGGACAAGTGTGAGAAGGCCTGCCGCCCCGAGGAGGAGTGCCTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574982.1
CDS-3UTR CAA 90 bp TTGAGGGCAAGGCACTCCTCCTCGGGGCGGCAGGCCTTCTCACACTTGTCCTCCCTTGCTAGGTCTTCCTaGACATCTGAGATGCCAGGT +
Preference number: 5 (lower is better)
Translates to: LRARHSSSGRQAFSHLSSLARSS*TSEMPG
Trigger: ACCTGGCATCTCAGATGTCAAGGAAGACCTAGCAAG...GGAGGACAAGTGTGAGAAGGCCTGCCGCCCCGAGGAGGAGTGCCTTGCCCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574982.1
CDS CCA 90 bp CAGGAGGGTGTAATTCTGACAGGGGTCAAAACAGACATGAGCCTCTaGGGTGCCAGGAGCTCCGCAGTCCAGGTCCAGCCCATACGAACT +
Preference number: 5 (lower is better)
Translates to: QEGVILTGVKTDMSL*GARSSAVQVQPIRT
Trigger: AGTTCGTATGGGCTGGACCTGGACTGCGGAGCTCCTGGCACCCCAGAGGCTCATGTCTGTTTTGACCCCTGTCAGAATTACACCCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000381362.8
ENST00000575449.1
ENST00000575730.1
CDS-3UTR CAA 90 bp AGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCAGCCCCAGGTGCTGTaGAGGGCAAGGCACTCCTCC +
Preference number: 5 (lower is better)
Translates to: RAPSKLAFKVPSTNEKGSQPQVL*RARHSS
Trigger: GGAGGAGTGCCTTGCCCTCAACAGCACCTGGGGCTG...GCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp CGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACCAGCCCCAGGTGCTGTaGAGGGCAAGGCACTCCTCC +
Preference number: 5 (lower is better)
Translates to: RFPEVKNMHHTSGKGWSHQPQVL*RARHSS
Trigger: GGAGGAGTGCCTTGCCCTCAACAGCACCTGGGGCTG...GTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS TCA 90 bp AAGGCCAGCCACAGGAGGCCAGAGCCCACCATCCTTTCCATAAGGTaGGGCATGCAGGTCACTTTGCTGTATGCAGACTTCCCATGCAGC +
Preference number: 5 (lower is better)
Translates to: KASHRRPEPTILSIR*GMQVTLLYADFPCS
Trigger: GCTGCATGGGAAGTCTGCATACAGCAAAGTGACCTGCATGCCTCACCTTATGGAAAGGATGGTGGGCTCTGGCCTCCTGTGGCTGGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
ENST00000572478.5
ENST00000575449.1
ENST00000575582.5
ENST00000575730.1
CDS TCA 90 bp CTGTCTGCAAGATGCTGCTGCAGTTTGGGTCTCGCAGGTAGGCAATaGCCTCCTCCCCCAAACCCAGGCCTCCCAGCAAACATTTGTCCA +
Preference number: 5 (lower is better)
Translates to: LSARCCCSLGLAGRQ*PPPPNPGLPANICP
Trigger: TGGACAAATGTTTGCTGGGAGGCCTGGGTTTGGGGGAGGAGGTCATTGCCTACCTGCGAGACCCAAACTGCAGCAGCATCTTGCAGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
ENST00000573897.5
ENST00000575582.5
CDS-3UTR CAA 90 bp TCTCCATGCTCATCCCATACCCCAGTGACAGGATACCGCTTCCCTGAAGTTAAACAGCCCCAGGTGCTGTaGAGGGCAAGGCACTCCTCC +
Preference number: 5 (lower is better)
Translates to: SPCSSHTPVTGYRFPEVKQPQVL*RARHSS
Trigger: GGAGGAGTGCCTTGCCCTCAACAGCACCTGGGGCTG...TTTAACTTCAGGGAAGCGGTATCCTGTCACTGGGGTATGGGATGAGCATGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp AAACTGTGGACATCAGAACTATTGAGGTCCTGTCTGCAGAAACAGCCCCAGGTGCAGCCCCAGGTGCTGTaGAGGGCAAGGCACTCCTCC +
Preference number: 5 (lower is better)
Translates to: KLWTSELLRSCLQKQPQVQPQVL*RARHSS
Trigger: GGAGGAGTGCCTTGCCCTCAACAGCACCTGGGGCTG...CACCTGGGGCTGTTTCTGCAGACAGGACCTCAATAGTTCTGATGTCCACAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574982.1
CDS-3UTR CAA 90 bp ACTATTGAGGTCCTGTCTGCAGAAACAGCCCCAGGTGCTGTTGAGGGCAAGGCATTGTCCACCTTCACCTaGATCTCCCTGGGCCCACAG +
Preference number: 5 (lower is better)
Translates to: TIEVLSAETAPGAVEGKALSTFT*ISLGPQ
Trigger: CTGTGGGCCCAGGGAGATCAAGGTGAAGGTGGACAA...TGCCTTGCCCTCAACAGCACCTGGGGCTGTTTCTGCAGACAGGACCTCAATAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574982.1
CDS-3UTR CAA 90 bp CAAACTTTGGTTTCTTTTGGCTTGCCAGGCCCCACTCCCGGAGCTTGTGCAGCCAGATGCTGCTGCAGTTaGGGTCTCGCAGGTAGGCAA +
Preference number: 5 (lower is better)
Translates to: QTLVSFGLPGPTPGACAARCCCS*GLAGRQ
Trigger: TTGCCTACCTGCGAGACCCAAACTGCAGCAGCATCT...GGCTGCACAAGCTCCGGGAGTGGGGCCTGGCAAGCCAAAAGAAACCAAAGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CAA 90 bp AGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCCGGGAGGTGTCCCCTaGTTCCAAGATGGCACCCAC +
Preference number: 5 (lower is better)
Translates to: RAPSKLAFKVPSTNEKGSPGGVP*FQDGTH
Trigger: GTGGGTGCCATCTTGGAACAAGGGGACACCTCCCGG...GCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS CCA 90 bp ATTACACCAGGGAGTGCCTTCCAACCGGTACACATGGTACCCGCCTaGGCAGGCCTTCACCAGCACCTCTGTTTTCCAGAAACAGCAGTT +
Preference number: 5 (lower is better)
Translates to: ITPGSAFQPVHMVPA*AGLHQHLCFPETAV
Trigger: AACTGCTGTTTCTGGAAAACAGAGGTGCTGGTGAAGGCCTGCCCAGGCGGGTACCATGTGTACCGGTTGGAAGGCACTCCCTGGTGTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000381362.8
ENST00000572347.5
ENST00000572478.5
CDS-3UTR CAA 90 bp GGCCTTATCTGTAGCTGTGGGAAGGGCGTAAGTCAGTGTACACATGTCAGCATCGCACAGGCAGTGTGGTaGGTGATGCCATCCCCAAGG +
Preference number: 5 (lower is better)
Translates to: GLICSCGKGVSQCTHVSIAQAVW*VMPSPR
Trigger: CCTTGGGGATGGCATCACCAACCACACTGCCTGTGC...GATGCTGACATGTGTACACTGACTTACGCCCTTCCCACAGCTACAGATAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CAA 90 bp TTTTGGCTTGCCAGGCCCCACTCCCGGAGCTTGTGCAGCCTGGATGTATCTCTTTTCCAGAAACAGCAGTaGCCACTCCAATGGGCACAG +
Preference number: 5 (lower is better)
Translates to: FWLARPHSRSLCSLDVSLFQKQQ*PLQWAQ
Trigger: CTGTGCCCATTGGAGTGGCAACTGCTGTTTCTGGAA...AAGAGATACATCCAGGCTGCACAAGCTCCGGGAGTGGGGCCTGGCAAGCCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CAA 90 bp GAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCTTTTCTTTCAGCCCCAGGTGCTGTaGAGGGCAAGGCACTCCTCC +
Preference number: 5 (lower is better)
Translates to: EKGSRGQIDRNPTMLLFFQPQVL*RARHSS
Trigger: GGAGGAGTGCCTTGCCCTCAACAGCACCTGGGGCTG...AAAGAAAAGCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp CAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCCCGGGAGGTGTCCCCTaGTTCCAAGATGGCACCCAC +
Preference number: 5 (lower is better)
Translates to: QQMRRAAEDRLTETPLCCPGGVP*FQDGTH
Trigger: GTGGGTGCCATCTTGGAACAAGGGGACACCTCCCGG...GCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp CAAACTTTGGTTTCTTTTGGCTTGCCAGGCCCCACTCCCGGAGCTTGTGCAGCCGGGCACCTAGCAAGCTaGCTTTCAAGGTCCCATCAA +
Preference number: 5 (lower is better)
Translates to: QTLVSFGLPGPTPGACAAGHLAS*LSRSHQ
Trigger: TTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCC...GGCTGCACAAGCTCCGGGAGTGGGGCCTGGCAAGCCAAAAGAAACCAAAGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS CCA 90 bp ACAAAGCGTTCCTCCTCTGGCCAGCCATGGGAATGCAGCCTGCTGTaGGCCGTCTTTTTATTGCAATTTCCCACCCATGTGTCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: TKRSSSGQPWECSLL*AVFLLQFPTHVSLL
Trigger: GAGGAGAGACACATGGGTGGGAAATTGCAATAAAAAGACGGCCCACAGCAGGCTGCATTCCCATGGCTGGCCAGAGGAGGAACGCTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS CCA 90 bp TGCAGCTCCGATGAGAACACAAAGCGTTCCTCCTCTGGCCAGCCATaGGAATGCAGCCTGCTGTGGGCCGTCTTTTTATTGCAATTTCCC +
Preference number: 5 (lower is better)
Translates to: CSSDENTKRSSSGQP*ECSLLWAVFLLQFP
Trigger: GGGAAATTGCAATAAAAAGACGGCCCACAGCAGGCTGCATTCCCATGGCTGGCCAGAGGAGGAACGCTTTGTGTTCTCATCGGAGCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS-3UTR CAA 90 bp CGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACTTGTCCACCTTCACCTaGATCTCCCTGGGCCCACAG +
Preference number: 5 (lower is better)
Translates to: RFPEVKNMHHTSGKGWSHLSTFT*ISLGPQ
Trigger: CTGTGGGCCCAGGGAGATCAAGGTGAAGGTGGACAA...GTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp ACCGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCGGGCTGCAAGGCAGCTaGGAGGCTGACTTTCATGTC +
Preference number: 5 (lower is better)
Translates to: TASLKLKTCTTLPVKAGAGLQGS*EADFHV
Trigger: GACATGAAAGTCAGCCTCCAAGCTGCCTTGCAGCCC...GGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp TCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCCGGGAGGTGTCCCCTaGTTCCAAGATGGCACCCAC +
Preference number: 5 (lower is better)
Translates to: STNEKGSRGQIDRNPTMLPGGVP*FQDGTH
Trigger: GTGGGTGCCATCTTGGAACAAGGGGACACCTCCCGG...CAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp CACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGTTGGTTTCTTTTGGCTaGCCAGGCCCCACTCCCGGA +
Preference number: 5 (lower is better)
Translates to: HLASLLSRSHQQMRRAAELVSFG*PGPTPG
Trigger: TCCGGGAGTGGGGCCTGGCAAGCCAAAAGAAACCAA...CTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS GCA 90 bp CTGGCCAGCCATGGGAATGCAGCCTGCTGTGGGCCGTCTTTTTATTaGAATTTCCCACCCATGTGTCTCTCCTCAATTGGTGCACAGGTA +
Preference number: 5 (lower is better)
Translates to: LASHGNAACCGPSFY*NFPPMCLSSIGAQV
Trigger: TACCTGTGCACCAATTGAGGAGAGACACATGGGTGGGAAATTGCAATAAAAAGACGGCCCACAGCAGGCTGCATTCCCATGGCTGGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS-3UTR CAA 90 bp TCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGGCACAGGCAGTGTGGTaGGTGATGCCATCCCCAAGG +
Preference number: 5 (lower is better)
Translates to: STNEKGSRGQIDRNPTMLAQAVW*VMPSPR
Trigger: CCTTGGGGATGGCATCACCAACCACACTGCCTGTGC...CAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302555.10
ENST00000381362.8
CDS-3UTR CAA 90 bp TCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGTTGTCCACCTTCACCTaGATCTCCCTGGGCCCACAG +
Preference number: 5 (lower is better)
Translates to: SLKLKTCTTLPVKAGATELSTFT*ISLGPQ
Trigger: CTGTGGGCCCAGGGAGATCAAGGTGAAGGTGGACAA...CTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp CAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCTTGTCCACCTTCACCTaGATCTCCCTGGGCCCACAG +
Preference number: 5 (lower is better)
Translates to: QQMRRAAEDRLTETPLCCLSTFT*ISLGPQ
Trigger: CTGTGGGCCCAGGGAGATCAAGGTGAAGGTGGACAA...GCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp GGCACCTGCTGGTCCACCTTGGTTCCTGATGTGTCTCTGAGGCCAACTTTGCGACAGTGGGTAGGCACATaGGAAGTTGATGTTGAGGAT +
Preference number: 5 (lower is better)
Translates to: GTCWSTLVPDVSLRPTLRQWVGT*EVDVED
Trigger: ATCCTCAACATCAACTTCCAATGTGCCTACCCACTG...TCGCAAAGTTGGCCTCAGAGACACATCAGGAACCAAGGTGGACCAGCAGGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CAA 90 bp AAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCCGTGTAGTTCTGGTCTaGGAAGAGGGCCATCCTGAC +
Preference number: 5 (lower is better)
Translates to: KVPSTNEKGSRGQIDRNPRVVLV*EEGHPD
Trigger: GTCAGGATGGCCCTCTTCCAAGACCAGAACTACACG...GGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp ACCGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCTTCACAAGGTCAGCCTaGTCTTCAGTGGGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: TASLKLKTCTTLPVKAGAFTRSA*SSVGVA
Trigger: TGCCACCCCCACTGAAGACAAGGCTGACCTTGTGAA...GGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS TCA 90 bp GGCTTGTTGAGTGGAGGTGAGATAAGCCATTTACGCAAAGGATGGTaGAAGAAGGGCCCTCCCCTCACAATGTCAACCCTTCCAGCTGTC +
Preference number: 5 (lower is better)
Translates to: GLLSGGEISHLRKGW*KKGPPLTMSTLPAV
Trigger: GACAGCTGGAAGGGTTGACATTGTGAGGGGAGGGCCCTTCTTTCACCATCCTTTGCGTAAATGGCTTATCTCACCTCCACTCAACAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS-3UTR CAA 90 bp CGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACGGCATGCAGGTCACTTaGCTGTATGCAGACTTCCCA +
Preference number: 5 (lower is better)
Translates to: RFPEVKNMHHTSGKGWSHGMQVT*LYADFP
Trigger: TGGGAAGTCTGCATACAGCAAAGTGACCTGCATGCC...GTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp CGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACTTCCAGAAACAGCAGTaGCCACTCCAATGGGCACAG +
Preference number: 5 (lower is better)
Translates to: RFPEVKNMHHTSGKGWSHFQKQQ*PLQWAQ
Trigger: CTGTGCCCATTGGAGTGGCAACTGCTGTTTCTGGAA...GTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302555.10
ENST00000381362.8
CDS-3UTR CAA 90 bp GAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCTTTTCTTTTTGTCCACCTTCACCTaGATCTCCCTGGGCCCACAG +
Preference number: 5 (lower is better)
Translates to: EKGSRGQIDRNPTMLLFFLSTFT*ISLGPQ
Trigger: CTGTGGGCCCAGGGAGATCAAGGTGAAGGTGGACAA...AAAGAAAAGCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp AGAGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAAGATGCTGCTGCAGTTaGGGTCTCGCAGGTAGGCAA +
Preference number: 5 (lower is better)
Translates to: RGHLASLLSRSHQQMRRARCCCS*GLAGRQ
Trigger: TTGCCTACCTGCGAGACCCAAACTGCAGCAGCATCT...TGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp GTCTCCAGAAAGGGACTTCACCCATCTCCTAGGCTTTGCAGTTTCATTCCCATAGGGCTGCAAGGCAGCTaGGAGGCTGACTTTCATGTC +
Preference number: 5 (lower is better)
Translates to: VSRKGLHPSPRLCSFIPIGLQGS*EADFHV
Trigger: GACATGAAAGTCAGCCTCCAAGCTGCCTTGCAGCCC...TATGGGAATGAAACTGCAAAGCCTAGGAGATGGGTGAAGTCCCTTTCTGGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CAA 90 bp TTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGGGCTGCAAGGCAGCTaGGAGGCTGACTTTCATGTC +
Preference number: 5 (lower is better)
Translates to: LLSRSHQQMRRAAEDRLTGLQGS*EADFHV
Trigger: GACATGAAAGTCAGCCTCCAAGCTGCCTTGCAGCCC...TGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp TCTCCATGCTCATCCCATACCCCAGTGACAGGATACCGCTTCCCTGAAGTTAAACGTGTAGTTCTGGTCTaGGAAGAGGGCCATCCTGAC +
Preference number: 5 (lower is better)
Translates to: SPCSSHTPVTGYRFPEVKRVVLV*EEGHPD
Trigger: GTCAGGATGGCCCTCTTCCAAGACCAGAACTACACG...TTTAACTTCAGGGAAGCGGTATCCTGTCACTGGGGTATGGGATGAGCATGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp AGAGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCATTCACAAGGTCAGCCTaGTCTTCAGTGGGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: RGHLASLLSRSHQQMRRAFTRSA*SSVGVA
Trigger: TGCCACCCCCACTGAAGACAAGGCTGACCTTGTGAA...TGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp AGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCGCAGCCGAGGACAGATaGACAGAAACCCCACTATGT +
Preference number: 5 (lower is better)
Translates to: RAPSKLAFKVPSTNEKGSAAEDR*TETPLC
Trigger: ACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGC...GCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp CGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACGGGCACCTAGCAAGCTaGCTTTCAAGGTCCCATCAA +
Preference number: 5 (lower is better)
Translates to: RFPEVKNMHHTSGKGWSHGHLAS*LSRSHQ
Trigger: TTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCC...GTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp ACGTCTCCTCCAAGCAGATACACAGGCTCGGCACCTGCTGGTCCACCTTGGTTCTTCTGTTGGGACTTCTaGCTTAATCCTTCAGAGCAA +
Preference number: 5 (lower is better)
Translates to: TSPPSRYTGSAPAGPPWFFCWDF*LNPSEQ
Trigger: TTGCTCTGAAGGATTAAGCAAGAAGTCCCAACAGAA...GAACCAAGGTGGACCAGCAGGTGCCGAGCCTGTGTATCTGCTTGGAGGAGACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CAA 90 bp AGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCTGTGTGATGCCCTATTaGCTGCATCTGTGTCGGGTG +
Preference number: 5 (lower is better)
Translates to: RAPSKLAFKVPSTNEKGSCVMPY*LHLCRV
Trigger: CACCCGACACAGATGCAGCAAATAGGGCATCACACA...GCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS TCA 90 bp TCTAGAACCCGGGCTAGGTCGATGGCCGGTACTTCACTGCGGACTTaGCTTCTTGAGCAAGAAGGCTGGCACTGTTCATTAAGAGAATCA +
Preference number: 5 (lower is better)
Translates to: SRTRARSMAGTSLRT*LLEQEGWHCSLRES
Trigger: TGATTCTCTTAATGAACAGTGCCAGCCTTCTTGCTCAAGAAGTCAAGTCCGCAGTGAAGTACCGGCCATCGACCTAGCCCGGGTTCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS TCA 90 bp GAGCCACCTTCTCTGCACTTCTATCCTCACTTGCTAGGTCTTCCTTaGCATCTGAGATGCCAGGTGAGCAGAATACTTACCTCGCTGCAC +
Preference number: 5 (lower is better)
Translates to: EPPSLHFYPHLLGLP*HLRCQVSRILTSLH
Trigger: GTGCAGCGAGGTAAGTATTCTGCTCACCTGGCATCTCAGATGTCAAGGAAGACCTAGCAAGTGAGGATAGAAGTGCAGAGAAGGTGGCTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574982.1
ENST00000575730.1
CDS-3UTR CAA 90 bp AGAGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGGCATGCAGGTCACTTaGCTGTATGCAGACTTCCCA +
Preference number: 5 (lower is better)
Translates to: RGHLASLLSRSHQQMRRAGMQVT*LYADFP
Trigger: TGGGAAGTCTGCATACAGCAAAGTGACCTGCATGCC...TGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp ACTATTGAGGTCCTGTCTGCAGAAACAGCCCCAGGTGCTGTTGAGGGCAAGGCATGGACATCAGAACTATaGAGGTCCTGTCTGCAGAAA +
Preference number: 5 (lower is better)
Translates to: TIEVLSAETAPGAVEGKAWTSEL*RSCLQK
Trigger: TTTCTGCAGACAGGACCTCAATAGTTCTGATGTCCA...TGCCTTGCCCTCAACAGCACCTGGGGCTGTTTCTGCAGACAGGACCTCAATAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574982.1
CDS-3UTR CAA 90 bp AAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCCCTCCCAGCAAACATTaGTCCACCTTCACCTTGATC +
Preference number: 5 (lower is better)
Translates to: KVPSTNEKGSRGQIDRNPPPSKH*STFTLI
Trigger: GATCAAGGTGAAGGTGGACAAATGTTTGCTGGGAGG...GGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp CGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACCCTCCCAGCAAACATTaGTCCACCTTCACCTTGATC +
Preference number: 5 (lower is better)
Translates to: RFPEVKNMHHTSGKGWSHPPSKH*STFTLI
Trigger: GATCAAGGTGAAGGTGGACAAATGTTTGCTGGGAGG...GTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp TTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAAGATGCTGCTGCAGTTaGGGTCTCGCAGGTAGGCAA +
Preference number: 5 (lower is better)
Translates to: LLSRSHQQMRRAAEDRLTRCCCS*GLAGRQ
Trigger: TTGCCTACCTGCGAGACCCAAACTGCAGCAGCATCT...TGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp TCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGAGATGCTGCTGCAGTTaGGGTCTCGCAGGTAGGCAA +
Preference number: 5 (lower is better)
Translates to: STNEKGSRGQIDRNPTMLRCCCS*GLAGRQ
Trigger: TTGCCTACCTGCGAGACCCAAACTGCAGCAGCATCT...CAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp GTCTCCAGAAAGGGACTTCACCCATCTCCTAGGCTTTGCAGTTTCATTCCCATACGTGTAGTTCTGGTCTaGGAAGAGGGCCATCCTGAC +
Preference number: 5 (lower is better)
Translates to: VSRKGLHPSPRLCSFIPIRVVLV*EEGHPD
Trigger: GTCAGGATGGCCCTCTTCCAAGACCAGAACTACACG...TATGGGAATGAAACTGCAAAGCCTAGGAGATGGGTGAAGTCCCTTTCTGGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CAA 90 bp GAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCTTTTCTTTCGTGTAGTTCTGGTCTaGGAAGAGGGCCATCCTGAC +
Preference number: 5 (lower is better)
Translates to: EKGSRGQIDRNPTMLLFFRVVLV*EEGHPD
Trigger: GTCAGGATGGCCCTCTTCCAAGACCAGAACTACACG...AAAGAAAAGCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp TTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGATTCACAAGGTCAGCCTaGTCTTCAGTGGGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: FPEVKNMHHTSGKGWSHRFTRSA*SSVGVA
Trigger: TGCCACCCCCACTGAAGACAAGGCTGACCTTGTGAA...TCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp AGAGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCATGCGGACTTGACTTCTaGAGCAAGAAGGCTGGCACT +
Preference number: 5 (lower is better)
Translates to: RGHLASLLSRSHQQMRRACGLDF*SKKAGT
Trigger: AGTGCCAGCCTTCTTGCTCAAGAAGTCAAGTCCGCA...TGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp TCTCCATGCTCATCCCATACCCCAGTGACAGGATACCGCTTCCCTGAAGTTAAATGCGGACTTGACTTCTaGAGCAAGAAGGCTGGCACT +
Preference number: 5 (lower is better)
Translates to: SPCSSHTPVTGYRFPEVKCGLDF*SKKAGT
Trigger: AGTGCCAGCCTTCTTGCTCAAGAAGTCAAGTCCGCA...TTTAACTTCAGGGAAGCGGTATCCTGTCACTGGGGTATGGGATGAGCATGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp CGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACCCAAGCCTGTGTGAATaGGAGTGGAAAGCAGAAGTG +
Preference number: 5 (lower is better)
Translates to: RFPEVKNMHHTSGKGWSHPSLCE*EWKAEV
Trigger: CACTTCTGCTTTCCACTCCAATTCACACAGGCTTGG...GTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp CACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGCCAAGCCTGTGTGAATaGGAGTGGAAAGCAGAAGTG +
Preference number: 5 (lower is better)
Translates to: HLASLLSRSHQQMRRAAEPSLCE*EWKAEV
Trigger: CACTTCTGCTTTCCACTCCAATTCACACAGGCTTGG...CTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp TCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGGGGCACCTAGCAAGCTaGCTTTCAAGGTCCCATCAA +
Preference number: 5 (lower is better)
Translates to: SLKLKTCTTLPVKAGATEGHLAS*LSRSHQ
Trigger: TTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCC...CTCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp AGAGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGGGCACCTAGCAAGCTaGCTTTCAAGGTCCCATCAA +
Preference number: 5 (lower is better)
Translates to: RGHLASLLSRSHQQMRRAGHLAS*LSRSHQ
Trigger: TTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCC...TGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp AGAGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGAACAAGGCAGCACATaGGAACGTCTCCTCCAAGCA +
Preference number: 5 (lower is better)
Translates to: RGHLASLLSRSHQQMRRAEQGST*ERLLQA
Trigger: TGCTTGGAGGAGACGTTCCAATGTGCTGCCTTGTTC...TGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CAA 90 bp AGAGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGGCCATACACTGGGCTaGTTGAGTGGAGGTGAGATA +
Preference number: 5 (lower is better)
Translates to: RGHLASLLSRSHQQMRRAGHTLG*LSGGEI
Trigger: TATCTCACCTCCACTCAACAAGCCCAGTGTATGGCC...TGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS TCA 90 bp TATGATGGGAGTTCTAGGCCATACACTGGGCTTGTTGAGTGGAGGTaGGATAAGCCATTTACGCAAAGGATGGTGAAAGAAGGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: YDGSSRPYTGLVEWR*DKPFTQRMVKEGPS
Trigger: GGAGGGCCCTTCTTTCACCATCCTTTGCGTAAATGGCTTATCTCACCTCCACTCAACAAGCCCAGTGTATGGCCTAGAACTCCCATCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS GCA 90 bp CAAGATGGCACCCACATACAGCACGGACTCAACAGACAGTTCAACTaGATCCCCTTCGTAAGGATTCGTGTAGTTCTGGTCTTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: QDGTHIQHGLNRQFN*IPFVRIRVVLVLEE
Trigger: CTCTTCCAAGACCAGAACTACACGAATCCTTACGAAGGGGATGCAGTTGAACTGTCTGTTGAGTCCGTGCTGTATGTGGGTGCCATCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp TCTCCATGCTCATCCCATACCCCAGTGACAGGATACCGCTTCCCTGAAGTTAAACCTCCCAGCAAACATTaGTCCACCTTCACCTTGATC +
Preference number: 5 (lower is better)
Translates to: SPCSSHTPVTGYRFPEVKPPSKH*STFTLI
Trigger: GATCAAGGTGAAGGTGGACAAATGTTTGCTGGGAGG...TTTAACTTCAGGGAAGCGGTATCCTGTCACTGGGGTATGGGATGAGCATGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp AGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCAGTGGGTAGGCACATaGGAAGTTGATGTTGAGGAT +
Preference number: 5 (lower is better)
Translates to: RAPSKLAFKVPSTNEKGSQWVGT*EVDVED
Trigger: ATCCTCAACATCAACTTCCAATGTGCCTACCCACTG...GCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp AAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCCAGTGGGTAGGCACATaGGAAGTTGATGTTGAGGAT +
Preference number: 5 (lower is better)
Translates to: KVPSTNEKGSRGQIDRNPQWVGT*EVDVED
Trigger: ATCCTCAACATCAACTTCCAATGTGCCTACCCACTG...GGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp ATTCCTCCAGCATCTAGGTCCCAAGGATGTTTGTGTAGTTCTCTAAGTCACAGCTTCACAAGGTCAGCCTaGTCTTCAGTGGGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: IPPASRSQGCLCSSLSHSFTRSA*SSVGVA
Trigger: TGCCACCCCCACTGAAGACAAGGCTGACCTTGTGAA...GCTGTGACTTAGAGAACTACACAAACATCCTTGGGACCTAGATGCTGGAGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CAA 90 bp TCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGTGCGGACTTGACTTCTaGAGCAAGAAGGCTGGCACT +
Preference number: 5 (lower is better)
Translates to: STNEKGSRGQIDRNPTMLCGLDF*SKKAGT
Trigger: AGTGCCAGCCTTCTTGCTCAAGAAGTCAAGTCCGCA...CAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp AAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCCGGAGTTTCAGCATTTaGGCCAGGCTGATTTTGAAC +
Preference number: 5 (lower is better)
Translates to: KVPSTNEKGSRGQIDRNPRSFSI*ARLILN
Trigger: GTTCAAAATCAGCCTGGCCAAAATGCTGAAACTCCG...GGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp TTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGCAGCCGAGGACAGATaGACAGAAACCCCACTATGT +
Preference number: 5 (lower is better)
Translates to: LLSRSHQQMRRAAEDRLTAAEDR*TETPLC
Trigger: ACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGC...TGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp TTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGCAGCCGAGGACAGATaGACAGAAACCCCACTATGT +
Preference number: 5 (lower is better)
Translates to: FPEVKNMHHTSGKGWSHRAAEDR*TETPLC
Trigger: ACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGC...TCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp AGAGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAAGCAGGACTGGTGCATaGCTTCTGTTGGGACTTCTT +
Preference number: 5 (lower is better)
Translates to: RGHLASLLSRSHQQMRRASRTGA*LLLGLL
Trigger: AAGAAGTCCCAACAGAAGCAATGCACCAGTCCTGCT...TGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CAA 90 bp GAGCTTGTGCAGCCTGGATGTATCTCTTGCACTGGAACTTTGTGCTCTTATGTCTCTCTGAGGCCAACTTaGCGAGGCCTTATCTGTAGC +
Preference number: 5 (lower is better)
Translates to: ELVQPGCISCTGTLCSYVSLRPT*RGLICS
Trigger: GCTACAGATAAGGCCTCGCAAAGTTGGCCTCAGAGA...GACATAAGAGCACAAAGTTCCAGTGCAAGAGATACATCCAGGCTGCACAAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CAA 90 bp GATGCCCTATTTGCTGCATCTGTGTCGGGTGCTTTGAAGTACTCATTAAAGGTCACCTGCTGGTCCACCTaGGTTCCTGATGTGTCTCTG +
Preference number: 5 (lower is better)
Translates to: DALFAASVSGALKYSLKVTCWST*VPDVSL
Trigger: CAGAGACACATCAGGAACCAAGGTGGACCAGCAGGT...GACCTTTAATGAGTACTTCAAAGCACCCGACACAGATGCAGCAAATAGGGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CAA 90 bp TCTCCATGCTCATCCCATACCCCAGTGACAGGATACCGCTTCCCTGAAGTTAAACCAGCTGTCTCAGCATaGTGCGAATGCTTCCTACAA +
Preference number: 5 (lower is better)
Translates to: SPCSSHTPVTGYRFPEVKPAVSA*CECFLQ
Trigger: TTGTAGGAAGCATTCGCACAATGCTGAGACAGCTGG...TTTAACTTCAGGGAAGCGGTATCCTGTCACTGGGGTATGGGATGAGCATGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS-3UTR CAA 90 bp CAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCCATACACTGGGCTTGTaGAGTGGAGGTGAGATAAGC +
Preference number: 5 (lower is better)
Translates to: QQMRRAAEDRLTETPLCCHTLGL*SGGEIS
Trigger: GCTTATCTCACCTCCACTCAACAAGCCCAGTGTATG...GCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS-3UTR CAA 90 bp CAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCTGTGTCTCTCCTCAATaGGTGCACAGGTATGATGGG +
Preference number: 5 (lower is better)
Translates to: QQMRRAAEDRLTETPLCCCVSPQ*VHRYDG
Trigger: CCCATCATACCTGTGCACCAATTGAGGAGAGACACA...GCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS-3UTR CAA 90 bp CACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGTGGGCCGTCTTTTTATaGCAATTTCCCACCCATGTG +
Preference number: 5 (lower is better)
Translates to: HLASLLSRSHQQMRRAAEWAVFL*QFPTHV
Trigger: CACATGGGTGGGAAATTGCAATAAAAAGACGGCCCA...CTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS CCA 90 bp GCCGTCTTTTTATTGCAATTTCCCACCCATGTGTCTCTCCTCAATTaGTGCACAGGTATGATGGGAGTTCTAGGCCATACACTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: AVFLLQFPTHVSLLN*CTGMMGVLGHTLGL
Trigger: CAAGCCCAGTGTATGGCCTAGAACTCCCATCATACCTGTGCACCAATTGAGGAGAGACACATGGGTGGGAAATTGCAATAAAAAGACGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS-3UTR CAA 90 bp TGTATGTGTGATGCCCTATTTGCTGCATCTGTGTCGGGTGCTTTGAAGTACTCAGGCATGCAGGTCACTTaGCTGTATGCAGACTTCCCA +
Preference number: 5 (lower is better)
Translates to: CMCDALFAASVSGALKYSGMQVT*LYADFP
Trigger: TGGGAAGTCTGCATACAGCAAAGTGACCTGCATGCC...TGAGTACTTCAAAGCACCCGACACAGATGCAGCAAATAGGGCATCACACATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CAA 90 bp CACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGTGGACATCAGAACTATaGAGGTCCTGTCTGCAGAAA +
Preference number: 5 (lower is better)
Translates to: HLASLLSRSHQQMRRAAEWTSEL*RSCLQK
Trigger: TTTCTGCAGACAGGACCTCAATAGTTCTGATGTCCA...CTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp AGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCTGGACATCAGAACTATaGAGGTCCTGTCTGCAGAAA +
Preference number: 5 (lower is better)
Translates to: RAPSKLAFKVPSTNEKGSWTSEL*RSCLQK
Trigger: TTTCTGCAGACAGGACCTCAATAGTTCTGATGTCCA...GCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp CACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGCATTGGAAGTTGATGTaGAGGATGGTGTCTCTGATG +
Preference number: 5 (lower is better)
Translates to: HLASLLSRSHQQMRRAAEHWKLM*RMVSLM
Trigger: CATCAGAGACACCATCCTCAACATCAACTTCCAATG...CTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp AGGGCACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCATTGGAAGTTGATGTaGAGGATGGTGTCTCTGATG +
Preference number: 5 (lower is better)
Translates to: RAPSKLAFKVPSTNEKGSHWKLM*RMVSLM
Trigger: CATCAGAGACACCATCCTCAACATCAACTTCCAATG...GCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp CAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCCGGAGTTTCAGCATTTaGGCCAGGCTGATTTTGAAC +
Preference number: 5 (lower is better)
Translates to: QQMRRAAEDRLTETPLCCRSFSI*ARLILN
Trigger: GTTCAAAATCAGCCTGGCCAAAATGCTGAAACTCCG...GCAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp ATTCCTCCAGCATCTAGGTCCCAAGGATGTTTGTGTAGTTCTCTAAGTCACAGCGCAGCCGAGGACAGATaGACAGAAACCCCACTATGT +
Preference number: 5 (lower is better)
Translates to: IPPASRSQGCLCSSLSHSAAEDR*TETPLC
Trigger: ACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGC...GCTGTGACTTAGAGAACTACACAAACATCCTTGGGACCTAGATGCTGGAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CAA 90 bp GATGCCCTATTTGCTGCATCTGTGTCGGGTGCTTTGAAGTACTCATTAAAGGTCGTGAGAGGTACTCCCTaGGGTGATGGAGTTTCTGCA +
Preference number: 5 (lower is better)
Translates to: DALFAASVSGALKYSLKVVRGTP*GDGVSA
Trigger: TGCAGAAACTCCATCACCCAAGGGAGTACCTCTCAC...GACCTTTAATGAGTACTTCAAAGCACCCGACACAGATGCAGCAAATAGGGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CAA 90 bp CGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACTCTGTGTCGGGTGCTTaGAAGTACTCATTAAAGGTC +
Preference number: 5 (lower is better)
Translates to: RFPEVKNMHHTSGKGWSHSVSGA*KYSLKV
Trigger: GACCTTTAATGAGTACTTCAAAGCACCCGACACAGA...GTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CAA 90 bp TCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGGCCTGGATGTATCTCTaGCACTGGAACTTTGTGCTC +
Preference number: 5 (lower is better)
Translates to: STNEKGSRGQIDRNPTMLAWMYL*HWNFVL
Trigger: GAGCACAAAGTTCCAGTGCAAGAGATACATCCAGGC...CAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CAA 90 bp CACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGTAGATGGCATGGGTTaGATTTCTCTCCAGAATGTT +
Preference number: 5 (lower is better)
Translates to: HLASLLSRSHQQMRRAAEVDGMG*ISLQNV
Trigger: AACATTCTGGAGAGAAATCAAACCCATGCCATCTAC...CTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp CACCTAGCAAGCTTGCTTTCAAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGCTGATGATGAAATCATaGACCAAGGAGAGGGTGTTT +
Preference number: 5 (lower is better)
Translates to: HLASLLSRSHQQMRRAAELMMKS*TKERVF
Trigger: AAACACCCTCTCCTTGGTCAATGATTTCATCATCAG...CTCGGCTGCCCTTCTCATTTGTTGATGGGACCTTGAAAGCAAGCTTGCTAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp CGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACCTGATGATGAAATCATaGACCAAGGAGAGGGTGTTT +
Preference number: 5 (lower is better)
Translates to: RFPEVKNMHHTSGKGWSHLMMKS*TKERVF
Trigger: AAACACCCTCTCCTTGGTCAATGATTTCATCATCAG...GTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp TCTCCATGCTCATCCCATACCCCAGTGACAGGATACCGCTTCCCTGAAGTTAAACATTGGAAGTTGATGTaGAGGATGGTGTCTCTGATG +
Preference number: 5 (lower is better)
Translates to: SPCSSHTPVTGYRFPEVKHWKLM*RMVSLM
Trigger: CATCAGAGACACCATCCTCAACATCAACTTCCAATG...TTTAACTTCAGGGAAGCGGTATCCTGTCACTGGGGTATGGGATGAGCATGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp TTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGACAGTGGGTAGGCACATaGGAAGTTGATGTTGAGGAT +
Preference number: 5 (lower is better)
Translates to: FPEVKNMHHTSGKGWSHRQWVGT*EVDVED
Trigger: ATCCTCAACATCAACTTCCAATGTGCCTACCCACTG...TCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp TCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGCGGAGTTTCAGCATTTaGGCCAGGCTGATTTTGAAC +
Preference number: 5 (lower is better)
Translates to: STNEKGSRGQIDRNPTMLRSFSI*ARLILN
Trigger: GTTCAAAATCAGCCTGGCCAAAATGCTGAAACTCCG...CAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp CGCTTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAAGGCAAGACAAACTTaGGTTTCTTTTGGCTTGCCA +
Preference number: 5 (lower is better)
Translates to: RFPEVKNMHHTSGKGWSHKARQT*VSFGLP
Trigger: TGGCAAGCCAAAAGAAACCAAAGTTTGTCTTGCCTT...GTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS GCA 90 bp GTCTTTTTATTGCAATTTCCCACCCATGTGTCTCTCCTCAATTGGTaGACAGGTATGATGGGAGTTCTAGGCCATACACTGGGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: VFLLQFPTHVSLLNW*TGMMGVLGHTLGLL
Trigger: CAACAAGCCCAGTGTATGGCCTAGAACTCCCATCATACCTGTGCACCAATTGAGGAGAGACACATGGGTGGGAAATTGCAATAAAAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS-3UTR CAA 90 bp TCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGTGGACATCAGAACTATaGAGGTCCTGTCTGCAGAAA +
Preference number: 5 (lower is better)
Translates to: STNEKGSRGQIDRNPTMLWTSEL*RSCLQK
Trigger: TTTCTGCAGACAGGACCTCAATAGTTCTGATGTCCA...CAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp TGTATGTGTGATGCCCTATTTGCTGCATCTGTGTCGGGTGCTTTGAAGTACTCACGGAGTTTCAGCATTTaGGCCAGGCTGATTTTGAAC +
Preference number: 5 (lower is better)
Translates to: CMCDALFAASVSGALKYSRSFSI*ARLILN
Trigger: GTTCAAAATCAGCCTGGCCAAAATGCTGAAACTCCG...TGAGTACTTCAAAGCACCCGACACAGATGCAGCAAATAGGGCATCACACATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CAA 90 bp TTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAAGGTCCCAAGGATGTTaGTGTAGTTCTCTAAGTCAC +
Preference number: 5 (lower is better)
Translates to: FPEVKNMHHTSGKGWSHRRSQGC*CSSLSH
Trigger: GTGACTTAGAGAACTACACAAACATCCTTGGGACCT...TCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CAA 90 bp AAGGTCCCATCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCTCTTGCACTGGAACTTaGTGCTCTTATGTCCTTATA +
Preference number: 5 (lower is better)
Translates to: KVPSTNEKGSRGQIDRNPSCTGT*CSYVLI
Trigger: TATAAGGACATAAGAGCACAAAGTTCCAGTGCAAGA...GGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGATGGGACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CAA 90 bp GTCTCCAGAAAGGGACTTCACCCATCTCCTAGGCTTTGCAGTTTCATTCCCATAGTAGATGGCATGGGTTaGATTTCTCTCCAGAATGTT +
Preference number: 5 (lower is better)
Translates to: VSRKGLHPSPRLCSFIPIVDGMG*ISLQNV
Trigger: AACATTCTGGAGAGAAATCAAACCCATGCCATCTAC...TATGGGAATGAAACTGCAAAGCCTAGGAGATGGGTGAAGTCCCTTTCTGGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CAA 90 bp TCAACAAATGAGAAGGGCAGCCGAGGACAGATTGACAGAAACCCCACTATGTTGGTAGATGGCATGGGTTaGATTTCTCTCCAGAATGTT +
Preference number: 5 (lower is better)
Translates to: STNEKGSRGQIDRNPTMLVDGMG*ISLQNV
Trigger: AACATTCTGGAGAGAAATCAAACCCATGCCATCTAC...CAACATAGTGGGGTTTCTGTCAATCTGTCCTCGGCTGCCCTTCTCATTTGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp TTCCCTGAAGTTAAAAACATGCACCACACTTCCGGTAAAGGCTGGAGCCACAGAGTAGATGGCATGGGTTaGATTTCTCTCCAGAATGTT +
Preference number: 5 (lower is better)
Translates to: FPEVKNMHHTSGKGWSHRVDGMG*ISLQNV
Trigger: AACATTCTGGAGAGAAATCAAACCCATGCCATCTAC...TCTGTGGCTCCAGCCTTTACCGGAAGTGTGGTGCATGTTTTTAACTTCAGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS-3UTR CAA 90 bp GTCTCCAGAAAGGGACTTCACCCATCTCCTAGGCTTTGCAGTTTCATTCCCATACTGATGATGAAATCATaGACCAAGGAGAGGGTGTTT +
Preference number: 5 (lower is better)
Translates to: VSRKGLHPSPRLCSFIPILMMKS*TKERVF
Trigger: AAACACCCTCTCCTTGGTCAATGATTTCATCATCAG...TATGGGAATGAAACTGCAAAGCCTAGGAGATGGGTGAAGTCCCTTTCTGGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CAA 90 bp AGTTCTTCCTGGAGCAGAGTCTCCAAAAGTGGCCCTTTGACATGTTCCCATGGCTTCCCATGGCAATTTTaGGAAACCATGATAGAAACA +
Preference number: 5 (lower is better)
Translates to: SSSWSRVSKSGPLTCSHGFPWQF*ETMIET
Trigger: TGTTTCTATCATGGTTTCCAAAAATTGCCATGGGAA...GCCATGGGAACATGTCAAAGGGCCACTTTTGGAGACTCTGCTCCAGGAAGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CAA 90 bp ATGGAGTTTCTGCATCAAATTAAGTCATTCCTCCAGCATCTAGGTCCCAAGGATTGGACATCAGAACTATaGAGGTCCTGTCTGCAGAAA +
Preference number: 5 (lower is better)
Translates to: MEFLHQIKSFLQHLGPKDWTSEL*RSCLQK
Trigger: TTTCTGCAGACAGGACCTCAATAGTTCTGATGTCCA...ATCCTTGGGACCTAGATGCTGGAGGAATGACTTAATTTGATGCAGAAACTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CAA 90 bp ATGGAGTTTCTGCATCAAATTAAGTCATTCCTCCAGCATCTAGGTCCCAAGGATCATTGGAAGTTGATGTaGAGGATGGTGTCTCTGATG +
Preference number: 5 (lower is better)
Translates to: MEFLHQIKSFLQHLGPKDHWKLM*RMVSLM
Trigger: CATCAGAGACACCATCCTCAACATCAACTTCCAATG...ATCCTTGGGACCTAGATGCTGGAGGAATGACTTAATTTGATGCAGAAACTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS-3UTR CAA 90 bp ATCTCTTGCACTGGAACTTTGTGCTCTTATGTCCTTATAATTAACTCCCTTTTTTGCGGACTTGACTTCTaGAGCAAGAAGGCTGGCACT +
Preference number: 5 (lower is better)
Translates to: ISCTGTLCSYVLIINSLFCGLDF*SKKAGT
Trigger: AGTGCCAGCCTTCTTGCTCAAGAAGTCAAGTCCGCA...AAAAAGGGAGTTAATTATAAGGACATAAGAGCACAAAGTTCCAGTGCAAGAGAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000302555.10
CDS CCA 72 bp CGGGGCGGCAGGCCTTCTCACACTTGTCCTCCACAGTaGATGGGTTGGGCAGGAGCTGAGTCGAGGCTGCTC +
Preference number: 6 (lower is better)
Translates to: RGGRPSHTCPPQ*MGWAGAESRLL
Trigger: GAGCAGCCTCGACTCAGCTCCTGCCCAACCCATCCACTGTGGAGGACAAGTGTGAGAAGGCCTGCCGCCCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573897.5
CDS CCA 72 bp CATCCCCAAGGGCAGGGTGGGTCCCATTCAGCCACATaGGAGCGTCTGTCTGGCATCGGTGCACCTGGACAC +
Preference number: 6 (lower is better)
Translates to: HPQGQGGSHSAT*ERLSGIGAPGH
Trigger: GTGTCCAGGTGCACCGATGCCAGACAGACGCTCCCATGTGGCTGAATGGGACCCACCCTGCCCTTGGGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000381362.8
ENST00000572347.5
ENST00000572478.5
CDS CAA 90 bp TTGAGGGCAAGGCACTCCTCCTCGGGGCGGCAGGCCTTCTCACACTaGTCCTCCACAGTGGATGGGTCTCGCTGCACTGCAGATGCCTGG +
Preference number: 6 (lower is better)
Translates to: LRARHSSSGRQAFSH*SSTVDGSRCTADAW
Trigger: CCAGGCATCTGCAGTGCAGCGAGACCCATCCACTGTGGAGGACAAGTGTGAGAAGGCCTGCCGCCCCGAGGAGGAGTGCCTTGCCCTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341642.9
ENST00000575582.5
CDS CAA 90 bp TTGAGGGCAAGGCACTCCTCCTCGGGGCGGCAGGCCTTCTCACACTaGTCCTCCACAGTGGATGGGTCTCGTGGAACTCGCTGCACTGCA +
Preference number: 6 (lower is better)
Translates to: LRARHSSSGRQAFSH*SSTVDGSRGTRCTA
Trigger: TGCAGTGCAGCGAGTTCCACGAGACCCATCCACTGTGGAGGACAAGTGTGAGAAGGCCTGCCGCCCCGAGGAGGAGTGCCTTGCCCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS CAA 90 bp TTGAGGGCAAGGCACTCCTCCTCGGGGCGGCAGGCCTTCTCACACTaGTCCTCCACAGTGGATGGGTCTCGTGGAACTGTGCAGTATCTC +
Preference number: 6 (lower is better)
Translates to: LRARHSSSGRQAFSH*SSTVDGSRGTVQYL
Trigger: GAGATACTGCACAGTTCCACGAGACCCATCCACTGTGGAGGACAAGTGTGAGAAGGCCTGCCGCCCCGAGGAGGAGTGCCTTGCCCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381362.8
CDS TCA 72 bp AGTTGCCACTCCAATGGGCACAGGCAGTGTGGTTGGTaGTGCCATCCCCAAGGGCAGGGTGGGTCCCATTCA +
Preference number: 6 (lower is better)
Translates to: SCHSNGHRQCGW*CHPQGQGGSHS
Trigger: TGAATGGGACCCACCCTGCCCTTGGGGATGGCATCACCAACCACACTGCCTGTGCCCATTGGAGTGGCAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000381362.8
ENST00000572347.5
ENST00000572478.5
CDS GCA 72 bp CTCCACAGTGGATGGGTCTCGTGGAACTCGCTGCACTaGAGATGCCTGGGTCAGAATGCAGGAGACCAAGGC +
Preference number: 6 (lower is better)
Translates to: LHSGWVSWNSLH*RCLGQNAGDQG
Trigger: GCCTTGGTCTCCTGCATTCTGACCCAGGCATCTGCAGTGCAGCGAGTTCCACGAGACCCATCCACTGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS CCA 72 bp GTAATTCTGACAGGGGTCAAAACAGACATGAGCCTCTaGGGTGCCAGGAGCTCCGCAGTCCAGGTCCAGCCC +
Preference number: 6 (lower is better)
Translates to: VILTGVKTDMSL*GARSSAVQVQP
Trigger: GGGCTGGACCTGGACTGCGGAGCTCCTGGCACCCCAGAGGCTCATGTCTGTTTTGACCCCTGTCAGAATTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000381362.8
ENST00000575449.1
ENST00000575730.1
CDS CCA 72 bp AGCCACATGGGAGCGTCTGTCTGGCATCGGTGCACCTaGACACAGGTCTCCGACATCCTTACTCCTCCTTCC +
Preference number: 6 (lower is better)
Translates to: SHMGASVWHRCT*TQVSDILTPPS
Trigger: GGAAGGAGGAGTAAGGATGTCGGAGACCTGTGTCCAGGTGCACCGATGCCAGACAGACGCTCCCATGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302555.10
ENST00000381362.8
ENST00000572347.5
ENST00000572478.5
ENST00000575449.1
CDS CCA 72 bp AGGCCTTCTCACACTTGTCCTCCACAGTGGATGGGTTaGGCAGGAGCTGAGTCGAGGCTGCTCTGCATCCTC +
Preference number: 6 (lower is better)
Translates to: RPSHTCPPQWMG*AGAESRLLCIL
Trigger: GAGGATGCAGAGCAGCCTCGACTCAGCTCCTGCCCAACCCATCCACTGTGGAGGACAAGTGTGAGAAGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573897.5
CDS GCA 72 bp TTGTCCTCCACAGTGGATGGGTCTCGTGGAACTCGCTaGACTGCAGATGCCTGGGTCAGAATGCAGGAGACC +
Preference number: 6 (lower is better)
Translates to: LSSTVDGSRGTR*TADAWVRMQET
Trigger: GGTCTCCTGCATTCTGACCCAGGCATCTGCAGTGCAGCGAGTTCCACGAGACCCATCCACTGTGGAGGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS TCA 72 bp GCCGCTCATGTTTTTATCGCACCCCTGGGACCCTGCTaGGTTCTCTGTGCTTCGGAAGGGTTCATCCAGGAG +
Preference number: 6 (lower is better)
Translates to: AAHVFIAPLGPC*VLCASEGFIQE
Trigger: CTCCTGGATGAACCCTTCCGAAGCACAGAGAACTCAGCAGGGTCCCAGGGGTGCGATAAAAACATGAGCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302555.10
ENST00000381362.8
ENST00000572347.5
ENST00000575449.1
ENST00000575730.1
CDS GCA 72 bp AGCGTTCCTCCTCTGGCCAGCCATGGGAATGCAGCCTaGTGTGGGCCGTCTTTTTATTGCAATTTCCCACCC +
Preference number: 6 (lower is better)
Translates to: SVPPLASHGNAA*CGPSFYCNFPP
Trigger: GGGTGGGAAATTGCAATAAAAAGACGGCCCACAGCAGGCTGCATTCCCATGGCTGGCCAGAGGAGGAACGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS GCA 72 bp AGATGCCAGGTGAGCAGAATACTTACCTCGCTGCACTaGAGATGCCTGGGTCAGAATGCAGGAGACCAAGGC +
Preference number: 6 (lower is better)
Translates to: RCQVSRILTSLH*RCLGQNAGDQG
Trigger: GCCTTGGTCTCCTGCATTCTGACCCAGGCATCTGCAGTGCAGCGAGGTAAGTATTCTGCTCACCTGGCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574982.1
ENST00000575730.1
CDS CAA 72 bp GTTCCTCAACACCAGGTTAAACCGGGAGGTGTCCCCTaGTTCCAAGATGGCACCCACATACAGCACGGACTC +
Preference number: 6 (lower is better)
Translates to: VPQHQVKPGGVP*FQDGTHIQHGL
Trigger: GAGTCCGTGCTGTATGTGGGTGCCATCTTGGAACAAGGGGACACCTCCCGGTTTAACCTGGTGTTGAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS CAA 90 bp GGCATAGCAGTTCCTCAACACCAGGTTAAACCGGGAGGTGTCCCCTaGTTCCAAGATGGCACCCACATACAGCACGGACTCAACAGACAG +
Preference number: 6 (lower is better)
Translates to: GIAVPQHQVKPGGVP*FQDGTHIQHGLNRQ
Trigger: CTGTCTGTTGAGTCCGTGCTGTATGTGGGTGCCATCTTGGAACAAGGGGACACCTCCCGGTTTAACCTGGTGTTGAGGAACTGCTATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS TCA 72 bp CACAGGAGGCCAGAGCCCACCATCCTTTCCATAAGGTaGGGCATGCAGGTCACTTTGCTGTATGCAGACTTC +
Preference number: 6 (lower is better)
Translates to: HRRPEPTILSIR*GMQVTLLYADF
Trigger: GAAGTCTGCATACAGCAAAGTGACCTGCATGCCTCACCTTATGGAAAGGATGGTGGGCTCTGGCCTCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
ENST00000572478.5
ENST00000575449.1
ENST00000575582.5
ENST00000575730.1
CDS TCA 72 bp CGGGCTAGGTCGATGGCCGGTACTTCACTGCGGACTTaGCTTCTTGAGCAAGAAGGCTGGCACTGTTCATTA +
Preference number: 6 (lower is better)
Translates to: RARSMAGTSLRT*LLEQEGWHCSL
Trigger: TAATGAACAGTGCCAGCCTTCTTGCTCAAGAAGTCAAGTCCGCAGTGAAGTACCGGCCATCGACCTAGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS CCA 72 bp GATGAGAACACAAAGCGTTCCTCCTCTGGCCAGCCATaGGAATGCAGCCTGCTGTGGGCCGTCTTTTTATTG +
Preference number: 6 (lower is better)
Translates to: DENTKRSSSGQP*ECSLLWAVFLL
Trigger: CAATAAAAAGACGGCCCACAGCAGGCTGCATTCCCATGGCTGGCCAGAGGAGGAACGCTTTGTGTTCTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS CAA 90 bp TCTGGCCAGCCATGGGAATGCAGCCTGCTGTGGGCCGTCTTTTTATaGCAATTTCCCACCCATGTGTCTCTCCTCAATTGGTGCACAGGT +
Preference number: 6 (lower is better)
Translates to: SGQPWECSLLWAVFL*QFPTHVSLLNWCTG
Trigger: ACCTGTGCACCAATTGAGGAGAGACACATGGGTGGGAAATTGCAATAAAAAGACGGCCCACAGCAGGCTGCATTCCCATGGCTGGCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS CCA 72 bp GTAATTCTGACAGGGGTCAAAACAGACATGAGCCTCTaGGGTGCCAGGAGCTCCGATGAGAACACAAAGCGT +
Preference number: 6 (lower is better)
Translates to: VILTGVKTDMSL*GARSSDENTKR
Trigger: ACGCTTTGTGTTCTCATCGGAGCTCCTGGCACCCCAGAGGCTCATGTCTGTTTTGACCCCTGTCAGAATTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572347.5
CDS CAA 90 bp CAGTTCAACTGCATCCCCTTCGTAAGGATTCGTGTAGTTCTGGTCTaGGAAGAGGGCCATCCTGACAATGAACTCTCCATTCCCGTCCAC +
Preference number: 6 (lower is better)
Translates to: QFNCIPFVRIRVVLV*EEGHPDNELSIPVH
Trigger: GTGGACGGGAATGGAGAGTTCATTGTCAGGATGGCCCTCTTCCAAGACCAGAACTACACGAATCCTTACGAAGGGGATGCAGTTGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS CAA 90 bp AAGGGCCCTCCCCTCACAATGTCAACCCTTCCAGCTGTCTCAGCATaGTGCGAATGCTTCCTACAAACAATAGTGCTGTGTGCTGAATGC +
Preference number: 6 (lower is better)
Translates to: KGPPLTMSTLPAVSA*CECFLQTIVLCAEC
Trigger: GCATTCAGCACACAGCACTATTGTTTGTAGGAAGCATTCGCACAATGCTGAGACAGCTGGAAGGGTTGACATTGTGAGGGGAGGGCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS CAA 72 bp CCATGGGAATGCAGCCTGCTGTGGGCCGTCTTTTTATaGCAATTTCCCACCCATGTGTCTCTCCTCAATTGG +
Preference number: 6 (lower is better)
Translates to: PWECSLLWAVFL*QFPTHVSLLNW
Trigger: CCAATTGAGGAGAGACACATGGGTGGGAAATTGCAATAAAAAGACGGCCCACAGCAGGCTGCATTCCCATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS TCA 72 bp GTCGATGGCCGGTACTTCACTGCGGACTTGACTTCTTaGGCAAGAAGGCTGGCACTGTTCATTAAGAGAATC +
Preference number: 6 (lower is better)
Translates to: VDGRYFTADLTS*ARRLALFIKRI
Trigger: GATTCTCTTAATGAACAGTGCCAGCCTTCTTGCTCAAGAAGTCAAGTCCGCAGTGAAGTACCGGCCATCGAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS TCA 72 bp AGTGGAGGTGAGATAAGCCATTTACGCAAAGGATGGTaGAAGAAGGGCCCTCCCCTCACAATGTCAACCCTT +
Preference number: 6 (lower is better)
Translates to: SGGEISHLRKGW*KKGPPLTMSTL
Trigger: AAGGGTTGACATTGTGAGGGGAGGGCCCTTCTTTCACCATCCTTTGCGTAAATGGCTTATCTCACCTCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS GCA 72 bp ACCCACATACAGCACGGACTCAACAGACAGTTCAACTaGATCCCCTTCGTAAGGATTCGTGTAGTTCTGGTC +
Preference number: 6 (lower is better)
Translates to: THIQHGLNRQFN*IPFVRIRVVLV
Trigger: GACCAGAACTACACGAATCCTTACGAAGGGGATGCAGTTGAACTGTCTGTTGAGTCCGTGCTGTATGTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302555.10
ENST00000341642.9
ENST00000381360.9
ENST00000381362.8
CDS GCA 72 bp CATGGGAATGCAGCCTGCTGTGGGCCGTCTTTTTATTaGAATTTCCCACCCATGTGTCTCTCCTCAATTGGT +
Preference number: 6 (lower is better)
Translates to: HGNAACCGPSFY*NFPPMCLSSIG
Trigger: ACCAATTGAGGAGAGACACATGGGTGGGAAATTGCAATAAAAAGACGGCCCACAGCAGGCTGCATTCCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS GCA 72 bp TTCCATAAGGTGAGGCATGCAGGTCACTTTGCTGTATaGAGACTTCCCATGCAGCTGGAGCACTTGACAATG +
Preference number: 6 (lower is better)
Translates to: FHKVRHAGHFAV*RLPMQLEHLTM
Trigger: CATTGTCAAGTGCTCCAGCTGCATGGGAAGTCTGCATACAGCAAAGTGACCTGCATGCCTCACCTTATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575582.5
CDS CAA 90 bp GGCCGTCTTTTTATTGCAATTTCCCACCCATGTGTCTCTCCTCAATaGGTGCACAGGTATGATGGGAGTTCTAGGCCATACACTGGGCTT +
Preference number: 6 (lower is better)
Translates to: GRLFIAISHPCVSPQ*VHRYDGSSRPYTGL
Trigger: AAGCCCAGTGTATGGCCTAGAACTCCCATCATACCTGTGCACCAATTGAGGAGAGACACATGGGTGGGAAATTGCAATAAAAAGACGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS TCA 72 bp GTGCGAATGCTTCCTACAAACAATAGTGCTGTGTGCTaGATGCTGAACATGCTGGGCACTGCTTTGCGTTCT +
Preference number: 6 (lower is better)
Translates to: VRMLPTNNSAVC*MLNMLGTALRS
Trigger: AGAACGCAAAGCAGTGCCCAGCATGTTCAGCATTCAGCACACAGCACTATTGTTTGTAGGAAGCATTCGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS GCA 72 bp TTGCAATTTCCCACCCATGTGTCTCTCCTCAATTGGTaGACAGGTATGATGGGAGTTCTAGGCCATACACTG +
Preference number: 6 (lower is better)
Translates to: LQFPTHVSLLNW*TGMMGVLGHTL
Trigger: CAGTGTATGGCCTAGAACTCCCATCATACCTGTGCACCAATTGAGGAGAGACACATGGGTGGGAAATTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS CAA 72 bp CCCCTCACAATGTCAACCCTTCCAGCTGTCTCAGCATaGTGCGAATGCTTCCTACAAACAATAGTGCTGTGT +
Preference number: 6 (lower is better)
Translates to: PLTMSTLPAVSA*CECFLQTIVLC
Trigger: ACACAGCACTATTGTTTGTAGGAAGCATTCGCACAATGCTGAGACAGCTGGAAGGGTTGACATTGTGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS CAA 72 bp GGTATGATGGGAGTTCTAGGCCATACACTGGGCTTGTaGAGTGGAGGTGAGATAAGCCATTTACGCAAAGGA +
Preference number: 6 (lower is better)
Translates to: GMMGVLGHTLGL*SGGEISHLRKG
Trigger: TCCTTTGCGTAAATGGCTTATCTCACCTCCACTCAACAAGCCCAGTGTATGGCCTAGAACTCCCATCATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS TCA 72 bp TCTCTGCACTTCTATCCTCACTTGCTAGGTCTTCCTTaGCATCTGAGATGCCAGGTGAGCAGAATACTTACC +
Preference number: 6 (lower is better)
Translates to: SLHFYPHLLGLP*HLRCQVSRILT
Trigger: GGTAAGTATTCTGCTCACCTGGCATCTCAGATGTCAAGGAAGACCTAGCAAGTGAGGATAGAAGTGCAGAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574982.1
ENST00000575730.1
CDS GCA 72 bp ATGTCAACCCTTCCAGCTGTCTCAGCATTGTGCGAATaGTTCCTACAAACAATAGTGCTGTGTGCTGAATGC +
Preference number: 6 (lower is better)
Translates to: MSTLPAVSALCE*FLQTIVLCAEC
Trigger: GCATTCAGCACACAGCACTATTGTTTGTAGGAAGCATTCGCACAATGCTGAGACAGCTGGAAGGGTTGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS GCA 72 bp CTCACAATGTCAACCCTTCCAGCTGTCTCAGCATTGTaGGAATGCTTCCTACAAACAATAGTGCTGTGTGCT +
Preference number: 6 (lower is better)
Translates to: LTMSTLPAVSAL*ECFLQTIVLCA
Trigger: AGCACACAGCACTATTGTTTGTAGGAAGCATTCGCACAATGCTGAGACAGCTGGAAGGGTTGACATTGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS GCA 72 bp TTCCATAAGGTGAGGCATGCAGGTCACTTTGCTGTATaGAGACTTCCCATGCAGCTGCACACAAAAGTAATG +
Preference number: 6 (lower is better)
Translates to: FHKVRHAGHFAV*RLPMQLHTKVM
Trigger: CATTACTTTTGTGTGCAGCTGCATGGGAAGTCTGCATACAGCAAAGTGACCTGCATGCCTCACCTTATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575449.1
CDS CAA 72 bp ACAGGTATGATGGGAGTTCTAGGCCATACACTGGGCTaGTTGAGTGGAGGTGAGATAAGCCATTTACGCAAA +
Preference number: 6 (lower is better)
Translates to: TGMMGVLGHTLG*LSGGEISHLRK
Trigger: TTTGCGTAAATGGCTTATCTCACCTCCACTCAACAAGCCCAGTGTATGGCCTAGAACTCCCATCATACCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS CCA 72 bp TTATTGCAATTTCCCACCCATGTGTCTCTCCTCAATTaGTGCACAGGTATGATGGGAGTTCTAGGCCATACA +
Preference number: 6 (lower is better)
Translates to: LLQFPTHVSLLN*CTGMMGVLGHT
Trigger: TGTATGGCCTAGAACTCCCATCATACCTGTGCACCAATTGAGGAGAGACACATGGGTGGGAAATTGCAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS CAA 72 bp TTTATTGCAATTTCCCACCCATGTGTCTCTCCTCAATaGGTGCACAGGTATGATGGGAGTTCTAGGCCATAC +
Preference number: 6 (lower is better)
Translates to: FIAISHPCVSPQ*VHRYDGSSRPY
Trigger: GTATGGCCTAGAACTCCCATCATACCTGTGCACCAATTGAGGAGAGACACATGGGTGGGAAATTGCAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381360.9
CDS GCA 72 bp CTGGAGCACTTGACAATGGCCAGGGTCCAAACTACTTaGTGGGTTCTAAAAATTTCCAGAAACAAAGAATCC +
Preference number: 6 (lower is better)
Translates to: LEHLTMARVQTT*WVLKISRNKES
Trigger: GGATTCTTTGTTTCTGGAAATTTTTAGAACCCAGCAAGTAGTTTGGACCCTGGCCATTGTCAAGTGCTCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575582.5
CDS CAA 72 bp GCTGGAGCACTTGACAATGGCCAGGGTCCAAACTACTaGCTGGGTTCTAAAAATTTCCAGAAACAAAGAATC +
Preference number: 6 (lower is better)
Translates to: AGALDNGQGPNY*LGSKNFQKQRI
Trigger: GATTCTTTGTTTCTGGAAATTTTTAGAACCCAGCAAGTAGTTTGGACCCTGGCCATTGTCAAGTGCTCCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575582.5